Your job contains 1 sequence.
>026435
MDNSADSCDIVDRDGDAAATSSSTTSAPAAGAGGFKLLNRHGTVHQFMGGGRTADVLLWK
RRRVSFGVIVVATVAWLIFERSGLPFLSVCSDVLLLLIVLMFFRANFAAFRNKQLESLPE
LEVSEEMVNNAAASFRVKINYLLLMAHDITVGKDFRLFFQVVAYLWLLSAIGSYFSFFTL
AYIGTLLSITVPALYSRFEARVDRYCGMIHKSISQHYKVVDENVISRIPRTLSKDKVS
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 026435
(238 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:1005716554 - symbol:AT3G10915 species:3702 "Ar... 579 2.0e-61 2
TAIR|locus:2128238 - symbol:BTI2 "VIRB2-interacting prote... 312 6.4e-28 1
TAIR|locus:2160447 - symbol:BTI3 "VIRB2-interacting prote... 308 1.7e-27 1
TAIR|locus:2128494 - symbol:BTI1 "VIRB2-interacting prote... 298 1.9e-26 1
TAIR|locus:2080315 - symbol:AT3G54120 "AT3G54120" species... 291 1.1e-25 1
TAIR|locus:2062882 - symbol:AT2G46170 species:3702 "Arabi... 284 5.9e-25 1
TAIR|locus:2049077 - symbol:AT2G15280 "AT2G15280" species... 274 6.8e-24 1
TAIR|locus:2089663 - symbol:AT3G18260 "AT3G18260" species... 273 8.7e-24 1
TAIR|locus:2082772 - symbol:AT3G61560 species:3702 "Arabi... 130 1.8e-13 2
TAIR|locus:2046783 - symbol:RTNLB13 "AT2G23640" species:3... 161 6.4e-12 1
TAIR|locus:2090609 - symbol:AT3G19460 "AT3G19460" species... 158 1.3e-11 1
UNIPROTKB|G3X7U3 - symbol:LOC100847649 "Uncharacterized p... 104 1.2e-05 1
UNIPROTKB|K7EMR7 - symbol:RTN2 "Reticulon-2" species:9606... 100 2.3e-05 2
UNIPROTKB|O75298 - symbol:RTN2 "Reticulon-2" species:9606... 100 0.00020 2
ZFIN|ZDB-GENE-030710-1 - symbol:rtn4a "reticulon 4a" spec... 111 0.00030 1
UNIPROTKB|F1RPY3 - symbol:RTN3 "Uncharacterized protein" ... 108 0.00035 1
UNIPROTKB|F6S165 - symbol:RTN2 "Uncharacterized protein" ... 101 0.00037 2
RGD|1303245 - symbol:Rtn2 "reticulon 2" species:10116 "Ra... 106 0.00039 2
UNIPROTKB|F1LM00 - symbol:Rtn2 "Protein Rtn2" species:101... 106 0.00040 2
MGI|MGI:107612 - symbol:Rtn2 "reticulon 2 (Z-band associa... 106 0.00050 2
UNIPROTKB|F1NH22 - symbol:RTN1 "Uncharacterized protein" ... 104 0.00079 1
>TAIR|locus:1005716554 [details] [associations]
symbol:AT3G10915 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0005783 "endoplasmic
reticulum" evidence=IEA;ISS] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845
GO:GO:0005783 EMBL:CP002686 PANTHER:PTHR10994 IPI:IPI00938902
RefSeq:NP_001154603.1 UniGene:At.44168 ProteinModelPortal:F4J500
EnsemblPlants:AT3G10915.5 GeneID:820262 KEGG:ath:AT3G10915
OMA:HDITLGK Uniprot:F4J500
Length = 249
Score = 579 (208.9 bits), Expect = 2.0e-61, Sum P(2) = 2.0e-61
Identities = 112/186 (60%), Positives = 143/186 (76%)
Query: 54 ADVLLWKRRRVSFGVIVVATVAWLIFERSGLPFLSVCSDVLLLLIVLMXXXXXXXXXXXK 113
AD+LLW+RR +S GVI+++TVAWLIFE SGLPFLSV SDVLL++I++ +
Sbjct: 64 ADLLLWRRRHLSLGVIIISTVAWLIFEFSGLPFLSVSSDVLLIVIMISFVHARVSAFRNR 123
Query: 114 QXXXXXXXXXXXXMVNNAAASFRVKINYLLLMAHDITVGKDFRLFF-QVVAYLWLLSAIG 172
Q MVN+AAASFR+K+N+LL+MAHD+TVG DFRLFF QVV LWLLSAIG
Sbjct: 124 QLHSLPELVLSEEMVNSAAASFRIKLNHLLVMAHDVTVGNDFRLFFKQVVICLWLLSAIG 183
Query: 173 SYFSFFTLAYIGTLLSITVPALYSRFEARVDRYCGMIHKSISQHYKVVDENVISRIPRTL 232
SY S TL YIGT+LS+T+PALYS+++++VD+ CG IH+ +S HYK+VDENVISR+ +L
Sbjct: 184 SYISLCTLLYIGTILSVTIPALYSKYQSKVDKCCGTIHRRLSHHYKIVDENVISRLSWSL 243
Query: 233 SKDKVS 238
SKDK S
Sbjct: 244 SKDKDS 249
Score = 67 (28.6 bits), Expect = 2.0e-61, Sum P(2) = 2.0e-61
Identities = 12/18 (66%), Positives = 15/18 (83%)
Query: 35 FKLLNRHGTVHQFMGGGR 52
++LL R TVHQFMGGG+
Sbjct: 23 YRLLGRQITVHQFMGGGK 40
>TAIR|locus:2128238 [details] [associations]
symbol:BTI2 "VIRB2-interacting protein 2" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0005783 "endoplasmic reticulum" evidence=IEA;ISS;IDA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0005789
"endoplasmic reticulum membrane" evidence=IDA] [GO:0071458
"integral to cytosolic side of endoplasmic reticulum membrane"
evidence=IDA] [GO:0071782 "endoplasmic reticulum tubular network"
evidence=IDA] [GO:0071786 "endoplasmic reticulum tubular network
organization" evidence=IMP] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0010286 "heat acclimation" evidence=RCA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005886
GO:GO:0005794 EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL096882
EMBL:AL161531 GO:GO:0071458 PANTHER:PTHR10994 GO:GO:0071786
eggNOG:NOG303514 HOGENOM:HOG000237479 ProtClustDB:CLSN2685988
GO:GO:0071782 EMBL:AY034901 EMBL:AY048273 EMBL:AY057606
EMBL:BT002368 EMBL:AY086294 IPI:IPI00525362 PIR:T13013
RefSeq:NP_192861.1 UniGene:At.3649 ProteinModelPortal:Q9SUT9
SMR:Q9SUT9 IntAct:Q9SUT9 STRING:Q9SUT9 PaxDb:Q9SUT9 PRIDE:Q9SUT9
EnsemblPlants:AT4G11220.1 GeneID:826724 KEGG:ath:AT4G11220
TAIR:At4g11220 InParanoid:Q9SUT9 OMA:FANLRQI PhylomeDB:Q9SUT9
Genevestigator:Q9SUT9 Uniprot:Q9SUT9
Length = 271
Score = 312 (114.9 bits), Expect = 6.4e-28, P = 6.4e-28
Identities = 65/202 (32%), Positives = 105/202 (51%)
Query: 35 FKLLNRHGTVHQFMGGGRTADVLLWKRRRVSFGVIVVATVAWLIFERSGLPFLSVCSDVL 94
++L R VH+ +GGG+ AD+ +WK +++S GV ATVAW++FE L++ V+
Sbjct: 67 YRLFGRERPVHKVLGGGKPADIFMWKDKKMSGGVFGGATVAWVLFELMEYHLLTLLCHVM 126
Query: 95 LLLIVLMXXXXXXXXXXXKQXXXXXXXXXXXXMVNNAAASFRVKINYLLLMAHDITVGKD 154
++ + ++ K + A+ R++IN + +I G+D
Sbjct: 127 IVALAVLFLWSNATMFIHKSPPKIPEVHIPEEPLLQLASGLRIEINRGISSLREIASGRD 186
Query: 155 FRLFFQVVAYLWLLSAIGSYFSFFTLAYIGTLLSITVPALYSRFEARVDRYCGMIHKSIS 214
+ F +A LW+LS +G +SF TLAYI +L TVP Y ++E +VD Y +
Sbjct: 187 IKKFLSAIAGLWVLSILGGCYSFLTLAYIALVLLFTVPLFYDKYEDKVDSYGEKAMAELK 246
Query: 215 QHYKVVDENVISRIPRTLSKDK 236
+ Y V+D V S+IPR KDK
Sbjct: 247 KQYAVLDAKVFSKIPRGPLKDK 268
>TAIR|locus:2160447 [details] [associations]
symbol:BTI3 "VIRB2-interacting protein 3" species:3702
"Arabidopsis thaliana" [GO:0005783 "endoplasmic reticulum"
evidence=IEA;ISS;IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0005789 "endoplasmic reticulum membrane" evidence=IDA]
[GO:0071458 "integral to cytosolic side of endoplasmic reticulum
membrane" evidence=IDA] [GO:0071782 "endoplasmic reticulum tubular
network" evidence=IDA] [GO:0071786 "endoplasmic reticulum tubular
network organization" evidence=IMP] [GO:0009506 "plasmodesma"
evidence=IDA] InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845
GO:GO:0005886 GO:GO:0009506 EMBL:CP002688 GenomeReviews:BA000015_GR
EMBL:AB005233 GO:GO:0071458 PANTHER:PTHR10994 GO:GO:0071786
eggNOG:NOG303514 HOGENOM:HOG000237479 GO:GO:0071782 EMBL:AY035169
EMBL:AY057638 EMBL:AY150449 IPI:IPI00523388 RefSeq:NP_198975.1
UniGene:At.8344 ProteinModelPortal:Q9FFS0 IntAct:Q9FFS0
STRING:Q9FFS0 PaxDb:Q9FFS0 PRIDE:Q9FFS0 EnsemblPlants:AT5G41600.1
GeneID:834162 KEGG:ath:AT5G41600 TAIR:At5g41600 InParanoid:Q9FFS0
OMA:VMWLLTY PhylomeDB:Q9FFS0 ProtClustDB:CLSN2682625
Genevestigator:Q9FFS0 Uniprot:Q9FFS0
Length = 257
Score = 308 (113.5 bits), Expect = 1.7e-27, P = 1.7e-27
Identities = 72/236 (30%), Positives = 111/236 (47%)
Query: 6 DSCDIVDRDGDXXXXXXXXXXXXXXXXXXFKLLNRHGTVHQFMGGGRTADVLLWKRRRVS 65
DS + D D D ++L R VH+ +GGG+ AD+ LW+ ++VS
Sbjct: 24 DSSSLSDSDDDKKSTSSSSSSFKSKI---YRLFGREKPVHKVLGGGKPADIFLWRNKKVS 80
Query: 66 FGVIVVATVAWLIFERSGLPFLSVCSDVLLLLIVLMXXXXXXXXXXXKQXXXXXXXXXXX 125
GV+ T +W++FE L+ + + + K
Sbjct: 81 GGVLGAVTASWVLFELFEYHLLAFLCHFAIFALAALFLWSNACTFIHKSTPHIPEVHIPE 140
Query: 126 XMVNNAAASFRVKINYLLLMAHDITVGKDFRLFFQVVAYLWLLSAIGSYFSFFTLAYIGT 185
+ + R++IN L + +I GKD + F V+A LW+LS IGS ++F TL Y T
Sbjct: 141 DPILQLVSGLRIEINRGLTLLRNIASGKDVKKFILVIAGLWVLSIIGSCYNFLTLFYTAT 200
Query: 186 LLSITVPALYSRFEARVDRYCGMIHKSISQHYKVVDENV----ISRIPR-TLSKDK 236
+L T+P LY ++E +VD Y + I + Y V+DE V IS+IPR L+K K
Sbjct: 201 VLLFTIPVLYEKYEDKVDAYGEKAMREIKKQYAVLDEKVLRKVISKIPRGALNKKK 256
>TAIR|locus:2128494 [details] [associations]
symbol:BTI1 "VIRB2-interacting protein 1" species:3702
"Arabidopsis thaliana" [GO:0005783 "endoplasmic reticulum"
evidence=IEA;ISS;IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0005773 "vacuole" evidence=IDA] [GO:0005789 "endoplasmic
reticulum membrane" evidence=IDA] [GO:0071458 "integral to
cytosolic side of endoplasmic reticulum membrane" evidence=IDA]
[GO:0071782 "endoplasmic reticulum tubular network" evidence=IDA]
[GO:0071786 "endoplasmic reticulum tubular network organization"
evidence=IMP] InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845
GO:GO:0005886 GO:GO:0005773 EMBL:CP002687 GenomeReviews:CT486007_GR
EMBL:AL161559 EMBL:AL035394 GO:GO:0071458 PANTHER:PTHR10994
GO:GO:0071786 EMBL:AY050321 EMBL:AY133635 EMBL:AY087881
IPI:IPI00517163 PIR:T05595 RefSeq:NP_194094.1 UniGene:At.25485
ProteinModelPortal:Q9SUR3 SMR:Q9SUR3 STRING:Q9SUR3 PaxDb:Q9SUR3
PRIDE:Q9SUR3 EnsemblPlants:AT4G23630.1 GeneID:828463
KEGG:ath:AT4G23630 TAIR:At4g23630 eggNOG:NOG242905
HOGENOM:HOG000237479 InParanoid:Q9SUR3 OMA:EIGHGRD PhylomeDB:Q9SUR3
ProtClustDB:CLSN2685988 Genevestigator:Q9SUR3 GO:GO:0071782
Uniprot:Q9SUR3
Length = 275
Score = 298 (110.0 bits), Expect = 1.9e-26, P = 1.9e-26
Identities = 67/235 (28%), Positives = 113/235 (48%)
Query: 2 DNSADSCDIVDRDGDXXXXXXXXXXXXXXXXXXFKLLNRHGTVHQFMGGGRTADVLLWKR 61
D+S+ S D D + ++L R VH+ +GGG+ AD+ +WK
Sbjct: 39 DSSSSSSSSDDED-EKKKTKKPSSPSSSMKSKVYRLFGREQPVHKVLGGGKPADIFMWKN 97
Query: 62 RRVSFGVIVVATVAWLIFERSGLPFLSVCSDVLLLLIVLMXXXXXXXXXXXKQXXXXXXX 121
+++S GV+ AT AW++FE L++ V+++++ ++ K
Sbjct: 98 KKMSGGVLGGATAAWVVFELMEYHLLTLLCHVMIVVLAVLFLWSNATMFINKSPPKIPEV 157
Query: 122 XXXXXMVNNAAASFRVKINYLLLMAHDITVGKDFRLFFQVVAYLWLLSAIGSYFSFFTLA 181
+ A+ R++IN +I G+D + F +A LW+LS +G F+F TLA
Sbjct: 158 HIPEEPILQLASGLRIEINRGFSSLREIASGRDLKKFLIAIAGLWVLSILGGCFNFLTLA 217
Query: 182 YIGTLLSITVPALYSRFEARVDRYCGMIHKSISQHYKVVDENVISRIPRTLSKDK 236
YI +L TVP Y ++E +VD + + Y V+DE V+S+IP K+K
Sbjct: 218 YIALVLLFTVPLAYDKYEDKVDPLGEKAMIELKKQYAVLDEKVLSKIPLGPLKNK 272
>TAIR|locus:2080315 [details] [associations]
symbol:AT3G54120 "AT3G54120" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005783
"endoplasmic reticulum" evidence=IEA;ISS] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR003388 Pfam:PF02453
PROSITE:PS50845 GO:GO:0016021 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005789 EMBL:AL132957
PANTHER:PTHR10994 UniGene:At.25009 UniGene:At.68442
HOGENOM:HOG000237479 EMBL:BT010698 EMBL:BT010978 EMBL:AK229371
IPI:IPI00519528 PIR:T47571 RefSeq:NP_190980.1
ProteinModelPortal:Q9M392 IntAct:Q9M392 EnsemblPlants:AT3G54120.1
GeneID:824579 KEGG:ath:AT3G54120 TAIR:At3g54120 eggNOG:NOG256441
InParanoid:Q9M392 OMA:LWAKAAR PhylomeDB:Q9M392
ProtClustDB:CLSN2685077 Genevestigator:Q9M392 Uniprot:Q9M392
Length = 203
Score = 291 (107.5 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 57/164 (34%), Positives = 89/164 (54%)
Query: 36 KLLNRHGTVHQFMGGGRTADVLLWKRRRVSFGVIVVATVAWLIFERSGLPFLSVCSDVLL 95
KL NR T+H+ +GGG ADV+LW+++ VS G++ V +W++FE ++ S VLL
Sbjct: 7 KLFNRDRTIHEILGGGIVADVMLWRKKNVSVGIVTVTIASWMVFEAFAYTIFTLISSVLL 66
Query: 96 LLIVLMXXXXXXXXXXXKQXXXXXXXXXXXXMVNNAAASFRVKINYLLLMAHDITVGKDF 155
LL+ ++ + M A+ R+ +N LL ++HDI + +D
Sbjct: 67 LLLSILFLWSKSASILNRPSPPLPEFQISEAMAEEASIWLRIHVNKLLQVSHDIAMARDS 126
Query: 156 RLFFQVVAYLWLLSAIGSYFSFFTLAYIGTLLSITVPALYSRFE 199
L+ +V L+LLS IGS F TL + L+ +TVPA Y R+E
Sbjct: 127 ELYTKVAVSLFLLSLIGSLMDFQTLCHTSVLVVMTVPAFYERYE 170
>TAIR|locus:2062882 [details] [associations]
symbol:AT2G46170 species:3702 "Arabidopsis thaliana"
[GO:0005783 "endoplasmic reticulum" evidence=IEA;ISS;IDA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0080167 "response
to karrikin" evidence=IEP] [GO:0006007 "glucose catabolic process"
evidence=RCA] InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845
GO:GO:0005783 GO:GO:0016021 GO:GO:0005886 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0005789 GO:GO:0080167 EMBL:AC005397
PANTHER:PTHR10994 eggNOG:NOG303514 HOGENOM:HOG000237479
EMBL:AY053421 EMBL:AY074836 IPI:IPI00521101 PIR:E84899
RefSeq:NP_566065.1 UniGene:At.13080 ProteinModelPortal:O82352
SMR:O82352 PaxDb:O82352 PRIDE:O82352 EnsemblPlants:AT2G46170.1
GeneID:819224 KEGG:ath:AT2G46170 TAIR:At2g46170 InParanoid:O82352
OMA:RPLICSI PhylomeDB:O82352 ProtClustDB:CLSN2688961
Genevestigator:O82352 Uniprot:O82352
Length = 255
Score = 284 (105.0 bits), Expect = 5.9e-25, P = 5.9e-25
Identities = 62/202 (30%), Positives = 102/202 (50%)
Query: 35 FKLLNRHGTVHQFMGGGRTADVLLWKRRRVSFGVIVVATVAWLIFERSGLPFLSVCSDVL 94
+++ R VH+ +GGG+ ADV LW+ +++S V+ VAT W++FE LS+ +
Sbjct: 50 YRMFGREKPVHKVLGGGKPADVFLWRDKKLSGAVLGVATAIWVLFELVEYHLLSLLCHIS 109
Query: 95 LLLIVLMXXXXXXXXXXXKQXXXXXXXXXXXXMVNNAAASFRVKINYLLLMAHDITVGKD 154
+L + + K A+S R ++N ++ I +G+D
Sbjct: 110 ILALGGLFLWSNAHTLINKTSPQIPEIHVPEEAFLVVASSLRNELNQAFVILRSIALGRD 169
Query: 155 FRLFFQVVAYLWLLSAIGSYFSFFTLAYIGTLLSITVPALYSRFEARVDRYCGMIHKSIS 214
+ F VV LW++S +G++F+F TL YI ++ TVP LY + E +VD K +
Sbjct: 170 LKKFLMVVVGLWIISVVGNWFNFLTLVYICFVILHTVPMLYEKHEDKVDPLAEKAMKELQ 229
Query: 215 QHYKVVDENVISRIPRTLSKDK 236
+ Y V DE V+S+IP K K
Sbjct: 230 KQYVVFDEKVLSKIPIASLKAK 251
>TAIR|locus:2049077 [details] [associations]
symbol:AT2G15280 "AT2G15280" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0005783 "endoplasmic reticulum"
evidence=IEA;ISS] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0016021
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0005789 EMBL:AC007267
PANTHER:PTHR10994 HOGENOM:HOG000237479 EMBL:BX821446 EMBL:BT010716
EMBL:BT010986 IPI:IPI00533223 IPI:IPI00548624 PIR:A84527
RefSeq:NP_179130.2 RefSeq:NP_973467.1 UniGene:At.22376
UniGene:At.40435 ProteinModelPortal:Q6NPD8
EnsemblPlants:AT2G15280.1 GeneID:816017 KEGG:ath:AT2G15280
TAIR:At2g15280 eggNOG:NOG300173 InParanoid:Q6NPD8 OMA:VAREIYV
PhylomeDB:Q6NPD8 ProtClustDB:CLSN2690715 Genevestigator:Q6NPD8
Uniprot:Q6NPD8
Length = 201
Score = 274 (101.5 bits), Expect = 6.8e-24, P = 6.8e-24
Identities = 54/186 (29%), Positives = 97/186 (52%)
Query: 43 TVHQFMGGGRTADVLLWKRRRVSFGVIVVATVAWLIFERSGLPFLSVCSDVLLLLIVLMX 102
+VHQ + G AD+++WK RR F ++ T+ W +FE+ G F + LL +V++
Sbjct: 4 SVHQSIRFGSVADLIMWKNRRGGFLLLGSTTLLWFLFEKCGYSFFPFVVNTQLLSVVILF 63
Query: 103 XXXXXXXXXXKQXXXXXXXXXXXXMVNNAAASFRVKINYLLLMAHDITVGKDFRLFFQVV 162
+ V A + RV IN +L +A +I VG++ + F+V
Sbjct: 64 LWAKSAILFNRPMPQLPNLEITEEFVFMVADAIRVWINTVLAVAREIYVGRNAKQLFRVS 123
Query: 163 AYLWLLSAIGSYFSFFTLAYIGTLLSITVPALYSRFEARVDRYCGMIHKSISQHYKVVDE 222
LW +S +G++ +F T+ Y+G +LS+ +P LY R++ +D + H+ I Y+ +DE
Sbjct: 124 VVLWTVSFVGNFLNFLTILYLGVVLSLLIPFLYERYQDLIDEKLSLTHRVIQTQYRKIDE 183
Query: 223 NVISRI 228
++ +I
Sbjct: 184 RLLQKI 189
>TAIR|locus:2089663 [details] [associations]
symbol:AT3G18260 "AT3G18260" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0005783 "endoplasmic reticulum"
evidence=IEA;ISS] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0016021
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0005789
PANTHER:PTHR10994 HOGENOM:HOG000237479 EMBL:AP000414 EMBL:BT024845
EMBL:AY087239 IPI:IPI00546437 RefSeq:NP_566604.1 UniGene:At.38585
ProteinModelPortal:Q9LJQ5 PRIDE:Q9LJQ5 EnsemblPlants:AT3G18260.1
GeneID:821354 KEGG:ath:AT3G18260 TAIR:At3g18260 eggNOG:NOG309784
InParanoid:Q9LJQ5 OMA:CSFTTLL PhylomeDB:Q9LJQ5
ProtClustDB:CLSN2688524 Genevestigator:Q9LJQ5 Uniprot:Q9LJQ5
Length = 225
Score = 273 (101.2 bits), Expect = 8.7e-24, P = 8.7e-24
Identities = 56/201 (27%), Positives = 98/201 (48%)
Query: 36 KLLNRHGTVHQFMGGGRTADVLLWKRRRVSFGVIVVATVAWLIFERSGLPFLSVCSDVLL 95
KL R ++H GGG+ AD+LLW+ +++ +++ ++ W + E F+++ +
Sbjct: 22 KLFTRQRSIHSIFGGGKVADILLWREPKIAATLVIGVSILWFLMEVVEYNFITLICHASM 81
Query: 96 LLIVLMXXXXXXXXXXXKQXXXXXXXXXXXXMVNNAAASFRVKINYLLLMAHDITVGKDF 155
++ + A SF V+ N +L D+ G+D
Sbjct: 82 TSMLFFFIWSTASDFLNWERPLIPEVVLDESSFKQLARSFHVRFNQILTKLLDVACGRDP 141
Query: 156 RLFFQVVAYLWLLSAIGSYFSFFTLAYIGTLLSITVPALYSRFEARVDRYCGMIHKSISQ 215
LFF L+++S IG+YF+F L +IG + T+P +Y +E VD G + + + +
Sbjct: 142 PLFFLTTISLYIVSIIGTYFNFVNLLFIGFVSMQTLPVMYEMYEDDVDTAAGKLMRKMKK 201
Query: 216 HYKVVDENVISRIPRTLSKDK 236
YK VD NV+S+IPR K+K
Sbjct: 202 LYKKVDTNVLSKIPRGTVKNK 222
>TAIR|locus:2082772 [details] [associations]
symbol:AT3G61560 species:3702 "Arabidopsis thaliana"
[GO:0005783 "endoplasmic reticulum" evidence=IEA;ISS] [GO:0008150
"biological_process" evidence=ND] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0009506 "plasmodesma" evidence=IDA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
GO:GO:0005886 GO:GO:0009506 EMBL:CP002686 PANTHER:PTHR10994
IPI:IPI00540028 RefSeq:NP_001030913.1 UniGene:At.34268 PRIDE:F4JFD4
EnsemblPlants:AT3G61560.2 GeneID:825329 KEGG:ath:AT3G61560
Uniprot:F4JFD4
Length = 264
Score = 130 (50.8 bits), Expect = 1.8e-13, Sum P(2) = 1.8e-13
Identities = 27/67 (40%), Positives = 40/67 (59%)
Query: 35 FKLLNRHGTVHQFMGGGRTADVLLWKRRRVSFGVIVVATVAWLIFERSGLPFLS-VCSDV 93
++L R VH+ +GGG ADV LW+ +++S V+ VAT W++FE FLS VC +
Sbjct: 50 YRLFGREKPVHKVLGGGLPADVFLWRDKKLSASVLGVATAIWVLFELVEYHFLSLVCHIL 109
Query: 94 LLLLIVL 100
+ L L
Sbjct: 110 IFALAAL 116
Score = 91 (37.1 bits), Expect = 1.8e-13, Sum P(2) = 1.8e-13
Identities = 19/48 (39%), Positives = 27/48 (56%)
Query: 190 TVPALYSRFEARVDRYCGMIHKSISQHYKVVDENVISRIPRTLSKDKV 237
TVP LY + E +VD K + +HY V DE V+S++P K K+
Sbjct: 216 TVPMLYEKHEDKVDPVAEKTLKELKKHYMVFDEKVLSKLPVASLKAKL 263
>TAIR|locus:2046783 [details] [associations]
symbol:RTNLB13 "AT2G23640" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0005783 "endoplasmic reticulum"
evidence=IEA;ISS] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IDA] [GO:0071458 "integral to cytosolic side of
endoplasmic reticulum membrane" evidence=IDA] [GO:0071782
"endoplasmic reticulum tubular network" evidence=IDA] [GO:0071786
"endoplasmic reticulum tubular network organization" evidence=IMP]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 EMBL:AC003040
EMBL:CP002685 GenomeReviews:CT485783_GR EMBL:AC004482 GO:GO:0071458
PANTHER:PTHR10994 GO:GO:0071786 GO:GO:0071782 EMBL:BX822075
IPI:IPI00527827 PIR:T01153 RefSeq:NP_565555.1 UniGene:At.50091
ProteinModelPortal:O64837 STRING:O64837 PaxDb:O64837 PRIDE:O64837
EnsemblPlants:AT2G23640.1 GeneID:816896 KEGG:ath:AT2G23640
TAIR:At2g23640 eggNOG:NOG307342 HOGENOM:HOG000154223
InParanoid:O64837 OMA:WMFRVGA PhylomeDB:O64837
ProtClustDB:CLSN2688372 Genevestigator:O64837 Uniprot:O64837
Length = 206
Score = 161 (61.7 bits), Expect = 6.4e-12, P = 6.4e-12
Identities = 32/171 (18%), Positives = 76/171 (44%)
Query: 55 DVLLWKRRRVSFGVIVVATVAWLIFERSGLPFLSVCSDVLLLLIVLMXXXXXXXXXXXKQ 114
D+ LW+R++++F ++V+T W++ G +++ S + + ++ ++ K
Sbjct: 18 DIYLWRRKKLAFSTLLVSTSTWILLSFYGFTTITIVSWIGIAVVSMIFLWGSLLRLLSKV 77
Query: 115 XXXXXXXXXXXXMVNNAAASFRVKINYLLLMAHDITVGKDFRLFFQVVAYLWLLSAIGSY 174
V S R+ + ++ + ++ +F + V W+LS IG+
Sbjct: 78 EPELSGLEVSEEFVVETVRSCRMLMEEMVRWMFRVGAESEWFVFARTVLGFWILSRIGNL 137
Query: 175 FSFFTLAYIGTLLSITVPALYSRFEARVDRYCGMIHKSISQHYKVVDENVI 225
F T +IG ++ +TVP L+ + ++ ++ G + Y E ++
Sbjct: 138 LDFHTCLFIGLVMGLTVPKLWEEYGDQIQKHLGSLKDKSKGAYNTTHEKIL 188
>TAIR|locus:2090609 [details] [associations]
symbol:AT3G19460 "AT3G19460" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005783
"endoplasmic reticulum" evidence=IEA;ISS] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR003388 Pfam:PF02453
PROSITE:PS50845 GO:GO:0005783 EMBL:CP002686 EMBL:AB025624
PANTHER:PTHR10994 HOGENOM:HOG000237479 IPI:IPI00846973
RefSeq:NP_001078186.1 UniGene:At.38403 ProteinModelPortal:A8MR23
PRIDE:A8MR23 EnsemblPlants:AT3G19460.2 GeneID:821480
KEGG:ath:AT3G19460 OMA:RHINTIV ProtClustDB:CLSN2688563
Genevestigator:A8MR23 Uniprot:A8MR23
Length = 218
Score = 158 (60.7 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 46/165 (27%), Positives = 71/165 (43%)
Query: 54 ADVLLWKRRRVSFGVIVVATVAWLIFERSGLPFLSVCSDVLLLLIVLMXXXXXXXXXXXK 113
AD+LLW+ R + +++ +T W +FER+G LS S+VLLLL+ + +
Sbjct: 7 ADLLLWRNRTGAVILLISSTGFWFLFERAGYNLLSFVSNVLLLLVAIFFLWAKSATVLNR 66
Query: 114 QXXXXXXXXXXXXMVNNAAASFRVKINYLLLMAHDITVGKD-FRLFFQVVAYLWLLSAIG 172
N AA RV INY+L +A DIT+ ++ RL +LW I
Sbjct: 67 PLPPVPNMEIPEEFANKAADDLRVWINYVLSIASDITIARNPIRLLQVFFHHLW--QTIC 124
Query: 173 SYFSFFTLAYIGTLLSITVPALYSRFEARVDRYCGMIHKSISQHY 217
F F + Y+ +S Y G + S++ Y
Sbjct: 125 CIFLFLHVMYLTVHISFVFAVKQVSLVLWAISYVGTLINSLTLVY 169
Score = 106 (42.4 bits), Expect = 0.00051, P = 0.00051
Identities = 28/97 (28%), Positives = 49/97 (50%)
Query: 141 YLLLMAHDITVGKDFRLFF-QVVAYLWLLSAIGSYFSFFTLAYIGTLLSITVPALYSRFE 199
+L L +TV F QV LW +S +G+ + TL YIG LLS++ P +Y +++
Sbjct: 127 FLFLHVMYLTVHISFVFAVKQVSLVLWAISYVGTLINSLTLVYIGVLLSLSFPIVYEKYQ 186
Query: 200 ARVDRYCGMIHKSISQHYKVVDENVISRIPRTLSKDK 236
+D + ++ K V N+ + P ++K+K
Sbjct: 187 DHID-------EKVNSTSKFV-RNISRKFPLPINKEK 215
>UNIPROTKB|G3X7U3 [details] [associations]
symbol:LOC100847649 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
PANTHER:PTHR10994 GeneTree:ENSGT00390000009934 EMBL:DAAA02063501
Ensembl:ENSBTAT00000046142 Uniprot:G3X7U3
Length = 74
Score = 104 (41.7 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 18/75 (24%), Positives = 41/75 (54%)
Query: 160 QVVAYLWLLSAIGSYFSFFTLAYIGTLLSITVPALYSRFEARVDRYCGMIHKSISQHYKV 219
Q+ ++WL++ +G+ F+ TL + LL ++P +Y +++ ++D Y G+ K
Sbjct: 1 QLAVFMWLMTYVGAVFNGITLLILAELLVFSIPIVYEKYKTQIDHYVGIARDQT----KS 56
Query: 220 VDENVISRIPRTLSK 234
+ E + +++P K
Sbjct: 57 IVEKIQAKLPGIAKK 71
>UNIPROTKB|K7EMR7 [details] [associations]
symbol:RTN2 "Reticulon-2" species:9606 "Homo sapiens"
[GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 EMBL:CH471126
EMBL:AC138534 PANTHER:PTHR10994 HGNC:HGNC:10468
Ensembl:ENST00000590526 Uniprot:K7EMR7
Length = 271
Score = 100 (40.3 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 20/66 (30%), Positives = 40/66 (60%)
Query: 166 WLLSAIGSYFSFFTLAYIGTLLSITVPALYSRFEARVDRYCGMIHKSISQHYKVVDENVI 225
++L+ +G+ F+ TL +G + T+P LY + +A++D+Y G++ +S H K +
Sbjct: 192 YILTFVGAIFNGLTLLILGVIGLFTIPLLYRQHQAQIDQYVGLVTNQLS-HIKA---KIR 247
Query: 226 SRIPRT 231
++IP T
Sbjct: 248 AKIPGT 253
Score = 55 (24.4 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 16/49 (32%), Positives = 25/49 (51%)
Query: 50 GGRTADVLLWKRRRVSFGVIVVATVAWLIFERSGLPFLSVCSDVLLLLI 98
G + AD+L WK R S GV+ + L+ +SV + + LLL+
Sbjct: 68 GSKVADLLYWKDTRTS-GVVFTGLMVSLLCLLH-FSIVSVAAHLALLLL 114
>UNIPROTKB|O75298 [details] [associations]
symbol:RTN2 "Reticulon-2" species:9606 "Homo sapiens"
[GO:0008219 "cell death" evidence=IEA] [GO:0030176 "integral to
endoplasmic reticulum membrane" evidence=NAS] [GO:0004871 "signal
transducer activity" evidence=NAS] [GO:0007165 "signal
transduction" evidence=NAS] [GO:0005783 "endoplasmic reticulum"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0008219
GO:GO:0004871 GO:GO:0030176 PANTHER:PTHR10994 EMBL:AF004222
EMBL:AF004223 EMBL:AF004224 EMBL:AF038540 EMBL:BK001686
EMBL:BK001687 EMBL:BK001688 IPI:IPI00024983 IPI:IPI00216112
IPI:IPI00410134 RefSeq:NP_005610.1 RefSeq:NP_996783.1
RefSeq:NP_996784.1 UniGene:Hs.47517 ProteinModelPortal:O75298
SMR:O75298 IntAct:O75298 STRING:O75298 PhosphoSite:O75298
PaxDb:O75298 PRIDE:O75298 Ensembl:ENST00000245923
Ensembl:ENST00000344680 Ensembl:ENST00000430715 GeneID:6253
KEGG:hsa:6253 UCSC:uc002pcb.3 UCSC:uc002pcc.3 CTD:6253
GeneCards:GC19M045988 HGNC:HGNC:10468 HPA:HPA034941 MIM:603183
MIM:604805 neXtProt:NX_O75298 Orphanet:100993 PharmGKB:PA34881
eggNOG:NOG250449 HOGENOM:HOG000119393 HOVERGEN:HBG099866
InParanoid:O75298 OMA:REPITGQ OrthoDB:EOG4FJ88W PhylomeDB:O75298
ChiTaRS:RTN2 GenomeRNAi:6253 NextBio:24285 Bgee:O75298
CleanEx:HS_RTN2 Genevestigator:O75298 GermOnline:ENSG00000125744
Uniprot:O75298
Length = 545
Score = 100 (40.3 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 20/66 (30%), Positives = 40/66 (60%)
Query: 166 WLLSAIGSYFSFFTLAYIGTLLSITVPALYSRFEARVDRYCGMIHKSISQHYKVVDENVI 225
++L+ +G+ F+ TL +G + T+P LY + +A++D+Y G++ +S H K +
Sbjct: 466 YILTFVGAIFNGLTLLILGVIGLFTIPLLYRQHQAQIDQYVGLVTNQLS-HIKA---KIR 521
Query: 226 SRIPRT 231
++IP T
Sbjct: 522 AKIPGT 527
Score = 55 (24.4 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 16/49 (32%), Positives = 25/49 (51%)
Query: 50 GGRTADVLLWKRRRVSFGVIVVATVAWLIFERSGLPFLSVCSDVLLLLI 98
G + AD+L WK R S GV+ + L+ +SV + + LLL+
Sbjct: 342 GSKVADLLYWKDTRTS-GVVFTGLMVSLLCLLH-FSIVSVAAHLALLLL 388
>ZFIN|ZDB-GENE-030710-1 [details] [associations]
symbol:rtn4a "reticulon 4a" species:7955 "Danio
rerio" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0007409
"axonogenesis" evidence=IDA] [GO:0002040 "sprouting angiogenesis"
evidence=IMP] [GO:0007411 "axon guidance" evidence=IGI;IMP]
[GO:0048936 "peripheral nervous system neuron axonogenesis"
evidence=IMP] InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845
ZFIN:ZDB-GENE-030710-1 GO:GO:0005783 GO:GO:0007411 GO:GO:0002040
GO:GO:0048936 PANTHER:PTHR10994 HOVERGEN:HBG000838
GeneTree:ENSGT00390000009934 HOGENOM:HOG000015254 EMBL:BX324134
EMBL:AY555039 IPI:IPI00650155 RefSeq:NP_001073381.1
UniGene:Dr.121711 UniGene:Dr.47577 SMR:Q4G5W2 STRING:Q4G5W2
Ensembl:ENSDART00000081966 GeneID:447816 KEGG:dre:447816 CTD:447816
InParanoid:Q4G5W2 NextBio:20832340 Uniprot:Q4G5W2
Length = 322
Score = 111 (44.1 bits), Expect = 0.00030, P = 0.00030
Identities = 23/105 (21%), Positives = 52/105 (49%)
Query: 127 MVNNAAASFRVKINYLLLMAHDITVGKDFRLFFQVVAYLWLLSAIGSYFSFFTLAYIGTL 186
MV+ + S V IN ++ + + +D + +W+L+ +G+ F+ TL +G +
Sbjct: 217 MVHKYSDSTLVHINTVIKELRRLFLVEDLVDSLKFAVLMWILTYVGALFNGLTLIILGFI 276
Query: 187 LSITVPALYSRFEARVDRYCGMIHKSISQHYKVVDENVISRIPRT 231
+ + P +Y + +A++D Y G+++K + + P+T
Sbjct: 277 GAFSCPVIYEKHQAQIDHYYGLVNKQFKDVVGKIQAKIPGAKPKT 321
>UNIPROTKB|F1RPY3 [details] [associations]
symbol:RTN3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071786 "endoplasmic reticulum tubular network
organization" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845
GO:GO:0005783 PANTHER:PTHR10994 GO:GO:0071786
GeneTree:ENSGT00390000009934 OMA:VMWLLTY EMBL:FP089542
EMBL:AEMK01195949 Ensembl:ENSSSCT00000014266 Uniprot:F1RPY3
Length = 236
Score = 108 (43.1 bits), Expect = 0.00035, P = 0.00035
Identities = 24/106 (22%), Positives = 53/106 (50%)
Query: 129 NNAAASFRVKINYLLLMAHDITVGKDFRLFFQVVAYLWLLSAIGSYFSFFTLAYIGTLLS 188
+N + V IN L + + + +D ++ ++WL++ +G+ F+ TL + LL
Sbjct: 132 HNYVNAAMVHINKALKLIIRLFLVEDLVDSLKLAVFMWLMTYVGAVFNGITLLILAELLI 191
Query: 189 ITVPALYSRFEARVDRYCGMIHKSISQHYKVVDENVISRIPRTLSK 234
+VP +Y +++ ++D Y G+ K + E + +++P K
Sbjct: 192 FSVPVVYEKYKTQIDHYVGIARDQT----KSIVEKIQAKVPGIAKK 233
>UNIPROTKB|F6S165 [details] [associations]
symbol:RTN2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
PANTHER:PTHR10994 GeneTree:ENSGT00390000009934 OMA:REPITGQ
EMBL:DAAA02047375 IPI:IPI00842729 Ensembl:ENSBTAT00000043635
Uniprot:F6S165
Length = 541
Score = 101 (40.6 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 21/66 (31%), Positives = 40/66 (60%)
Query: 166 WLLSAIGSYFSFFTLAYIGTLLSITVPALYSRFEARVDRYCGMIHKSISQHYKVVDENVI 225
++L+ +G+ F+ TL +G + TVP LY + +A++D+Y G++ +S H K +
Sbjct: 462 YILTFVGAVFNGLTLLILGVIGVFTVPLLYRQHQAQIDQYVGLVTNQLS-HIKA---KIR 517
Query: 226 SRIPRT 231
++IP T
Sbjct: 518 AKIPGT 523
Score = 51 (23.0 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 15/49 (30%), Positives = 24/49 (48%)
Query: 50 GGRTADVLLWKRRRVSFGVIVVATVAWLIFERSGLPFLSVCSDVLLLLI 98
G + D+L WK + S GV+ + L+ +SV + V LLL+
Sbjct: 338 GSKVVDLLHWKDAKTS-GVVFTCLMVSLL-SLLHFSIVSVAAHVALLLL 384
>RGD|1303245 [details] [associations]
symbol:Rtn2 "reticulon 2" species:10116 "Rattus norvegicus"
[GO:0005783 "endoplasmic reticulum" evidence=ISO]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 RGD:1303245
GO:GO:0005783 PANTHER:PTHR10994 CTD:6253 eggNOG:NOG250449
HOGENOM:HOG000119393 HOVERGEN:HBG099866 OMA:REPITGQ
OrthoDB:EOG4FJ88W IPI:IPI00409538 EMBL:BC129079 EMBL:AY279211
EMBL:BK001788 RefSeq:NP_963856.1 UniGene:Rn.3210 STRING:Q6WN19
GeneID:308410 KEGG:rno:308410 UCSC:RGD:1303245 InParanoid:Q6WN19
NextBio:658806 Genevestigator:Q6WN19 Uniprot:Q6WN19
Length = 469
Score = 106 (42.4 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 28/97 (28%), Positives = 52/97 (53%)
Query: 144 LMAHDITVGKDFRLFFQV--------VAYL-WLLSAIGSYFSFFTLAYIGTLLSITVPAL 194
+ +H ++ R FF V +A L ++L+ +G+ F+ TL +G + TVP L
Sbjct: 360 IASHVVSTATQLRHFFLVEDLVDSLKLALLFYILTFVGAIFNGLTLVILGVVALFTVPLL 419
Query: 195 YSRFEARVDRYCGMIHKSISQHYKVVDENVISRIPRT 231
Y + +A++D+Y G++ +S H K + ++IP T
Sbjct: 420 YRQHQAQIDQYVGLVTSQLS-HIKA---KIRAKIPGT 452
Score = 43 (20.2 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 11/25 (44%), Positives = 14/25 (56%)
Query: 54 ADVLLWKRRRVSFGVIVVATVAWLI 78
AD+L WK R S G I +A L+
Sbjct: 271 ADLLYWKDTRTS-GAIFTGLMASLL 294
>UNIPROTKB|F1LM00 [details] [associations]
symbol:Rtn2 "Protein Rtn2" species:10116 "Rattus
norvegicus" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 RGD:1303245
GO:GO:0005783 PANTHER:PTHR10994 GeneTree:ENSGT00390000009934
IPI:IPI00409538 Ensembl:ENSRNOT00000022528 ArrayExpress:F1LM00
Uniprot:F1LM00
Length = 470
Score = 106 (42.4 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 28/97 (28%), Positives = 52/97 (53%)
Query: 144 LMAHDITVGKDFRLFFQV--------VAYL-WLLSAIGSYFSFFTLAYIGTLLSITVPAL 194
+ +H ++ R FF V +A L ++L+ +G+ F+ TL +G + TVP L
Sbjct: 361 IASHVVSTATQLRHFFLVEDLVDSLKLALLFYILTFVGAIFNGLTLVILGVVALFTVPLL 420
Query: 195 YSRFEARVDRYCGMIHKSISQHYKVVDENVISRIPRT 231
Y + +A++D+Y G++ +S H K + ++IP T
Sbjct: 421 YRQHQAQIDQYVGLVTSQLS-HIKA---KIRAKIPGT 453
Score = 43 (20.2 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 11/25 (44%), Positives = 14/25 (56%)
Query: 54 ADVLLWKRRRVSFGVIVVATVAWLI 78
AD+L WK R S G I +A L+
Sbjct: 272 ADLLYWKDTRTS-GAIFTGLMASLL 295
>MGI|MGI:107612 [details] [associations]
symbol:Rtn2 "reticulon 2 (Z-band associated protein)"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005783 "endoplasmic reticulum" evidence=ISO]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] InterPro:IPR003388 Pfam:PF02453
PROSITE:PS50845 MGI:MGI:107612 GO:GO:0016021 GO:GO:0005789
EMBL:AF093624 PANTHER:PTHR10994 HOGENOM:HOG000015254 CTD:6253
eggNOG:NOG250449 HOVERGEN:HBG099866 OMA:REPITGQ OrthoDB:EOG4FJ88W
EMBL:AF038537 EMBL:AF038538 EMBL:AF038539 EMBL:BC031370
IPI:IPI00120427 IPI:IPI00229453 RefSeq:NP_001020535.1
RefSeq:NP_038676.1 UniGene:Mm.24142 ProteinModelPortal:O70622
SMR:O70622 STRING:O70622 PhosphoSite:O70622 PaxDb:O70622
PRIDE:O70622 Ensembl:ENSMUST00000032559 Ensembl:ENSMUST00000108468
GeneID:20167 KEGG:mmu:20167 InParanoid:O70622 NextBio:297679
Bgee:O70622 CleanEx:MM_RTN2 Genevestigator:O70622
GermOnline:ENSMUSG00000030401 Uniprot:O70622
Length = 471
Score = 106 (42.4 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 28/97 (28%), Positives = 52/97 (53%)
Query: 144 LMAHDITVGKDFRLFFQV--------VAYL-WLLSAIGSYFSFFTLAYIGTLLSITVPAL 194
+ +H ++ R FF V +A L ++L+ +G+ F+ TL +G + TVP L
Sbjct: 362 IASHVVSTATQLRHFFLVEDLVDSLKLALLFYILTFVGAIFNGLTLVILGVVALFTVPLL 421
Query: 195 YSRFEARVDRYCGMIHKSISQHYKVVDENVISRIPRT 231
Y + +A++D+Y G++ +S H K + ++IP T
Sbjct: 422 YRQHQAQIDQYVGLVTNQLS-HIKA---KIRAKIPGT 454
Score = 42 (19.8 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 54 ADVLLWKRRRVSFGVIVVATVAWLI 78
AD+L WK R S G + +A L+
Sbjct: 273 ADLLYWKDTRTS-GAVFTGLMASLL 296
>UNIPROTKB|F1NH22 [details] [associations]
symbol:RTN1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
PANTHER:PTHR10994 GeneTree:ENSGT00390000009934 EMBL:AADN02003912
EMBL:AADN02003911 IPI:IPI00583109 Ensembl:ENSGALT00000019594
ArrayExpress:F1NH22 Uniprot:F1NH22
Length = 208
Score = 104 (41.7 bits), Expect = 0.00079, P = 0.00079
Identities = 18/65 (27%), Positives = 38/65 (58%)
Query: 165 LWLLSAIGSYFSFFTLAYIGTLLSITVPALYSRFEARVDRYCGMIHKSISQHYKVVDENV 224
+WLL+ +G+ F+ TL + + T+P +Y +++A++D+Y G++ H V +
Sbjct: 141 MWLLTYVGALFNGLTLLIMAVVSMFTLPVVYDKYQAQIDQYLGLVRT----HINTVVAKI 196
Query: 225 ISRIP 229
++IP
Sbjct: 197 QAKIP 201
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.330 0.141 0.426 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 238 197 0.00082 111 3 11 22 0.49 31
31 0.44 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 21
No. of states in DFA: 596 (63 KB)
Total size of DFA: 161 KB (2095 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 15.30u 0.12s 15.42t Elapsed: 00:00:01
Total cpu time: 15.30u 0.12s 15.42t Elapsed: 00:00:01
Start: Fri May 10 13:22:10 2013 End: Fri May 10 13:22:11 2013