BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026435
(238 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8GYH6|RTNLP_ARATH Reticulon-like protein B16 OS=Arabidopsis thaliana GN=RTNLB16 PE=2
SV=1
Length = 226
Score = 299 bits (766), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 143/227 (62%), Positives = 183/227 (80%), Gaps = 6/227 (2%)
Query: 12 DRDGDAAATSSSTTSAPAAGAGGFKLLNRHGTVHQFMGGGRTADVLLWKRRRVSFGVIVV 71
D DGD + +S+ ++LL R TVHQFMGGG+ AD+LLW+RR +S GVI++
Sbjct: 6 DIDGDFDGRNEGGSSSD------YRLLGRQITVHQFMGGGKAADLLLWRRRHLSLGVIII 59
Query: 72 ATVAWLIFERSGLPFLSVCSDVLLLLIVLMFFRANFAAFRNKQLESLPELEVSEEMVNNA 131
+TVAWLIFE SGLPFLSV SDVLL++I++ F A +AFRN+QL SLPEL +SEEMVN+A
Sbjct: 60 STVAWLIFEFSGLPFLSVSSDVLLIVIMISFVHARVSAFRNRQLHSLPELVLSEEMVNSA 119
Query: 132 AASFRVKINYLLLMAHDITVGKDFRLFFQVVAYLWLLSAIGSYFSFFTLAYIGTLLSITV 191
AASFR+K+N+LL+MAHD+TVG DFRLFF+VV LWLLSAIGSY S TL YIGT+LS+T+
Sbjct: 120 AASFRIKLNHLLVMAHDVTVGNDFRLFFKVVICLWLLSAIGSYISLCTLLYIGTILSVTI 179
Query: 192 PALYSRFEARVDRYCGMIHKSISQHYKVVDENVISRIPRTLSKDKVS 238
PALYS+++++VD+ CG IH+ +S HYK+VDENVISR+ +LSKDK S
Sbjct: 180 PALYSKYQSKVDKCCGTIHRRLSHHYKIVDENVISRLSWSLSKDKDS 226
>sp|Q9SUT9|RTNLB_ARATH Reticulon-like protein B2 OS=Arabidopsis thaliana GN=RTNLB2 PE=1
SV=1
Length = 271
Score = 149 bits (376), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 72/202 (35%), Positives = 117/202 (57%)
Query: 35 FKLLNRHGTVHQFMGGGRTADVLLWKRRRVSFGVIVVATVAWLIFERSGLPFLSVCSDVL 94
++L R VH+ +GGG+ AD+ +WK +++S GV ATVAW++FE L++ V+
Sbjct: 67 YRLFGRERPVHKVLGGGKPADIFMWKDKKMSGGVFGGATVAWVLFELMEYHLLTLLCHVM 126
Query: 95 LLLIVLMFFRANFAAFRNKQLESLPELEVSEEMVNNAAASFRVKINYLLLMAHDITVGKD 154
++ + ++F +N F +K +PE+ + EE + A+ R++IN + +I G+D
Sbjct: 127 IVALAVLFLWSNATMFIHKSPPKIPEVHIPEEPLLQLASGLRIEINRGISSLREIASGRD 186
Query: 155 FRLFFQVVAYLWLLSAIGSYFSFFTLAYIGTLLSITVPALYSRFEARVDRYCGMIHKSIS 214
+ F +A LW+LS +G +SF TLAYI +L TVP Y ++E +VD Y +
Sbjct: 187 IKKFLSAIAGLWVLSILGGCYSFLTLAYIALVLLFTVPLFYDKYEDKVDSYGEKAMAELK 246
Query: 215 QHYKVVDENVISRIPRTLSKDK 236
+ Y V+D V S+IPR KDK
Sbjct: 247 KQYAVLDAKVFSKIPRGPLKDK 268
>sp|Q6DBN4|RTNLF_ARATH Reticulon-like protein B6 OS=Arabidopsis thaliana GN=RTNLB6 PE=1
SV=1
Length = 253
Score = 146 bits (369), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 76/229 (33%), Positives = 123/229 (53%)
Query: 1 MDNSADSCDIVDRDGDAAATSSSTTSAPAAGAGGFKLLNRHGTVHQFMGGGRTADVLLWK 60
M+ AD D + + S A A ++L R VH+ +GGG ADV LW+
Sbjct: 16 MEKIADKIHDHDSSSSSDSEHEKPESPSALKAKIYRLFGREKPVHKVLGGGLPADVFLWR 75
Query: 61 RRRVSFGVIVVATVAWLIFERSGLPFLSVCSDVLLLLIVLMFFRANFAAFRNKQLESLPE 120
+++S V+ VAT W++FE FLS+ +L+ + +F +N AF NK +PE
Sbjct: 76 DKKLSASVLGVATAIWVLFELVEYHFLSLVCHILIFALAALFLLSNAHAFMNKTPPKIPE 135
Query: 121 LEVSEEMVNNAAASFRVKINYLLLMAHDITVGKDFRLFFQVVAYLWLLSAIGSYFSFFTL 180
+ + EE ++ R ++N ++ I +G+D + F VV LW++S +G++F+F TL
Sbjct: 136 IHIKEEHFLMIVSALRNELNQAFVILRSIALGRDLKKFLMVVFGLWIISVVGNWFNFLTL 195
Query: 181 AYIGTLLSITVPALYSRFEARVDRYCGMIHKSISQHYKVVDENVISRIP 229
YI ++ TVP LY + E +VD K + +HY V DE V+S++P
Sbjct: 196 VYICFVVLHTVPMLYEKHEDKVDPVAEKTLKELKKHYMVFDEKVLSKLP 244
>sp|Q9SUR3|RTNLA_ARATH Reticulon-like protein B1 OS=Arabidopsis thaliana GN=RTNLB1 PE=1
SV=1
Length = 275
Score = 146 bits (368), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 70/202 (34%), Positives = 117/202 (57%)
Query: 35 FKLLNRHGTVHQFMGGGRTADVLLWKRRRVSFGVIVVATVAWLIFERSGLPFLSVCSDVL 94
++L R VH+ +GGG+ AD+ +WK +++S GV+ AT AW++FE L++ V+
Sbjct: 71 YRLFGREQPVHKVLGGGKPADIFMWKNKKMSGGVLGGATAAWVVFELMEYHLLTLLCHVM 130
Query: 95 LLLIVLMFFRANFAAFRNKQLESLPELEVSEEMVNNAAASFRVKINYLLLMAHDITVGKD 154
++++ ++F +N F NK +PE+ + EE + A+ R++IN +I G+D
Sbjct: 131 IVVLAVLFLWSNATMFINKSPPKIPEVHIPEEPILQLASGLRIEINRGFSSLREIASGRD 190
Query: 155 FRLFFQVVAYLWLLSAIGSYFSFFTLAYIGTLLSITVPALYSRFEARVDRYCGMIHKSIS 214
+ F +A LW+LS +G F+F TLAYI +L TVP Y ++E +VD +
Sbjct: 191 LKKFLIAIAGLWVLSILGGCFNFLTLAYIALVLLFTVPLAYDKYEDKVDPLGEKAMIELK 250
Query: 215 QHYKVVDENVISRIPRTLSKDK 236
+ Y V+DE V+S+IP K+K
Sbjct: 251 KQYAVLDEKVLSKIPLGPLKNK 272
>sp|Q9FFS0|RTNLD_ARATH Reticulon-like protein B4 OS=Arabidopsis thaliana GN=RTNLB4 PE=1
SV=1
Length = 257
Score = 141 bits (356), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 73/207 (35%), Positives = 117/207 (56%), Gaps = 5/207 (2%)
Query: 35 FKLLNRHGTVHQFMGGGRTADVLLWKRRRVSFGVIVVATVAWLIFERSGLPFLSVCSDVL 94
++L R VH+ +GGG+ AD+ LW+ ++VS GV+ T +W++FE L+
Sbjct: 50 YRLFGREKPVHKVLGGGKPADIFLWRNKKVSGGVLGAVTASWVLFELFEYHLLAFLCHFA 109
Query: 95 LLLIVLMFFRANFAAFRNKQLESLPELEVSEEMVNNAAASFRVKINYLLLMAHDITVGKD 154
+ + +F +N F +K +PE+ + E+ + + R++IN L + +I GKD
Sbjct: 110 IFALAALFLWSNACTFIHKSTPHIPEVHIPEDPILQLVSGLRIEINRGLTLLRNIASGKD 169
Query: 155 FRLFFQVVAYLWLLSAIGSYFSFFTLAYIGTLLSITVPALYSRFEARVDRYCGMIHKSIS 214
+ F V+A LW+LS IGS ++F TL Y T+L T+P LY ++E +VD Y + I
Sbjct: 170 VKKFILVIAGLWVLSIIGSCYNFLTLFYTATVLLFTIPVLYEKYEDKVDAYGEKAMREIK 229
Query: 215 QHYKVVDE----NVISRIPR-TLSKDK 236
+ Y V+DE VIS+IPR L+K K
Sbjct: 230 KQYAVLDEKVLRKVISKIPRGALNKKK 256
>sp|O82352|RTNLE_ARATH Reticulon-like protein B5 OS=Arabidopsis thaliana GN=RTNLB5 PE=1
SV=1
Length = 255
Score = 139 bits (349), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 114/204 (55%)
Query: 26 SAPAAGAGGFKLLNRHGTVHQFMGGGRTADVLLWKRRRVSFGVIVVATVAWLIFERSGLP 85
S A A +++ R VH+ +GGG+ ADV LW+ +++S V+ VAT W++FE
Sbjct: 41 SPSAVKAKIYRMFGREKPVHKVLGGGKPADVFLWRDKKLSGAVLGVATAIWVLFELVEYH 100
Query: 86 FLSVCSDVLLLLIVLMFFRANFAAFRNKQLESLPELEVSEEMVNNAAASFRVKINYLLLM 145
LS+ + +L + +F +N NK +PE+ V EE A+S R ++N ++
Sbjct: 101 LLSLLCHISILALGGLFLWSNAHTLINKTSPQIPEIHVPEEAFLVVASSLRNELNQAFVI 160
Query: 146 AHDITVGKDFRLFFQVVAYLWLLSAIGSYFSFFTLAYIGTLLSITVPALYSRFEARVDRY 205
I +G+D + F VV LW++S +G++F+F TL YI ++ TVP LY + E +VD
Sbjct: 161 LRSIALGRDLKKFLMVVVGLWIISVVGNWFNFLTLVYICFVILHTVPMLYEKHEDKVDPL 220
Query: 206 CGMIHKSISQHYKVVDENVISRIP 229
K + + Y V DE V+S+IP
Sbjct: 221 AEKAMKELQKQYVVFDEKVLSKIP 244
>sp|Q9SH59|RTNLC_ARATH Reticulon-like protein B3 OS=Arabidopsis thaliana GN=RTNLB3 PE=1
SV=1
Length = 255
Score = 137 bits (346), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 117/200 (58%)
Query: 35 FKLLNRHGTVHQFMGGGRTADVLLWKRRRVSFGVIVVATVAWLIFERSGLPFLSVCSDVL 94
++L R +H+ GGG+ AD+ LW+ ++VS GV+ ATV+W++FE L++ +
Sbjct: 46 YRLFGREQPLHKLFGGGKPADIFLWRNKKVSGGVLGAATVSWILFELLEYNLLTLFGHIS 105
Query: 95 LLLIVLMFFRANFAAFRNKQLESLPELEVSEEMVNNAAASFRVKINYLLLMAHDITVGKD 154
+L + ++F ++ + F +K +PE+ + E++V A+ R++IN + DI G+D
Sbjct: 106 ILALAVLFLWSSASTFIHKSPLHIPEVHIPEDVVLQLASGLRIEINRGFTVLRDIASGRD 165
Query: 155 FRLFFQVVAYLWLLSAIGSYFSFFTLAYIGTLLSITVPALYSRFEARVDRYCGMIHKSIS 214
+ F V+A LW+LS +GS +F TL YI T+L T+P LY ++E +VD + + I
Sbjct: 166 LKKFLLVIAGLWVLSKVGSSCNFLTLIYIATVLLFTIPVLYEKYEDKVDDFGEKAMREIK 225
Query: 215 QHYKVVDENVISRIPRTLSK 234
+ Y D V+S++ + K
Sbjct: 226 KQYVEFDVKVLSKVMSKIPK 245
>sp|Q6NPD8|RTNLJ_ARATH Reticulon-like protein B10 OS=Arabidopsis thaliana GN=RTNLB10 PE=2
SV=1
Length = 201
Score = 134 bits (336), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 64/186 (34%), Positives = 110/186 (59%)
Query: 43 TVHQFMGGGRTADVLLWKRRRVSFGVIVVATVAWLIFERSGLPFLSVCSDVLLLLIVLMF 102
+VHQ + G AD+++WK RR F ++ T+ W +FE+ G F + LL +V++F
Sbjct: 4 SVHQSIRFGSVADLIMWKNRRGGFLLLGSTTLLWFLFEKCGYSFFPFVVNTQLLSVVILF 63
Query: 103 FRANFAAFRNKQLESLPELEVSEEMVNNAAASFRVKINYLLLMAHDITVGKDFRLFFQVV 162
A A N+ + LP LE++EE V A + RV IN +L +A +I VG++ + F+V
Sbjct: 64 LWAKSAILFNRPMPQLPNLEITEEFVFMVADAIRVWINTVLAVAREIYVGRNAKQLFRVS 123
Query: 163 AYLWLLSAIGSYFSFFTLAYIGTLLSITVPALYSRFEARVDRYCGMIHKSISQHYKVVDE 222
LW +S +G++ +F T+ Y+G +LS+ +P LY R++ +D + H+ I Y+ +DE
Sbjct: 124 VVLWTVSFVGNFLNFLTILYLGVVLSLLIPFLYERYQDLIDEKLSLTHRVIQTQYRKIDE 183
Query: 223 NVISRI 228
++ +I
Sbjct: 184 RLLQKI 189
>sp|Q9LT71|RTNLK_ARATH Reticulon-like protein B11 OS=Arabidopsis thaliana GN=RTNLB11 PE=2
SV=1
Length = 200
Score = 132 bits (331), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 68/192 (35%), Positives = 107/192 (55%), Gaps = 8/192 (4%)
Query: 45 HQFMGGGRTADVLLWKRRRVSFGVIVVATVAWLIFERSGLPFLSVCSDVLLLLIVLMFFR 104
HQ +G G AD+LLW+ R + +++ +T W +FER+G LS S+VLLLL+ + F
Sbjct: 14 HQSLGAGSVADLLLWRNRTGAVILLISSTGFWFLFERAGYNLLSFVSNVLLLLVAIFFLW 73
Query: 105 ANFAAFRNKQLESLPELEVSEEMVNNAAASFRVKINYLLLMAHDITVGKDFRLFFQVVAY 164
A A N+ L +P +E+ EE N AA RV INY+L +A DIT+ ++ QV
Sbjct: 74 AKSATVLNRPLPPVPNMEIPEEFANKAADDLRVWINYVLSIASDITIARNPIRLLQVSLV 133
Query: 165 LWLLSAIGSYFSFFTLAYIGTLLSITVPALYSRFEARVDRYCGMIHKSISQHYKVVDENV 224
LW +S +G+ + TL YIG LLS++ P +Y +++ +D K + N+
Sbjct: 134 LWAISYVGTLINSLTLVYIGVLLSLSFPIVYEKYQDHIDEKVNSTSKFV--------RNI 185
Query: 225 ISRIPRTLSKDK 236
+ P ++K+K
Sbjct: 186 SRKFPLPINKEK 197
>sp|Q9LJQ5|RTNLI_ARATH Reticulon-like protein B9 OS=Arabidopsis thaliana GN=RTNLB9 PE=2
SV=1
Length = 225
Score = 124 bits (312), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 109/201 (54%)
Query: 36 KLLNRHGTVHQFMGGGRTADVLLWKRRRVSFGVIVVATVAWLIFERSGLPFLSVCSDVLL 95
KL R ++H GGG+ AD+LLW+ +++ +++ ++ W + E F+++ +
Sbjct: 22 KLFTRQRSIHSIFGGGKVADILLWREPKIAATLVIGVSILWFLMEVVEYNFITLICHASM 81
Query: 96 LLIVLMFFRANFAAFRNKQLESLPELEVSEEMVNNAAASFRVKINYLLLMAHDITVGKDF 155
++ F + + F N + +PE+ + E A SF V+ N +L D+ G+D
Sbjct: 82 TSMLFFFIWSTASDFLNWERPLIPEVVLDESSFKQLARSFHVRFNQILTKLLDVACGRDP 141
Query: 156 RLFFQVVAYLWLLSAIGSYFSFFTLAYIGTLLSITVPALYSRFEARVDRYCGMIHKSISQ 215
LFF L+++S IG+YF+F L +IG + T+P +Y +E VD G + + + +
Sbjct: 142 PLFFLTTISLYIVSIIGTYFNFVNLLFIGFVSMQTLPVMYEMYEDDVDTAAGKLMRKMKK 201
Query: 216 HYKVVDENVISRIPRTLSKDK 236
YK VD NV+S+IPR K+K
Sbjct: 202 LYKKVDTNVLSKIPRGTVKNK 222
>sp|Q9SS37|RTNLH_ARATH Reticulon-like protein B8 OS=Arabidopsis thaliana GN=RTNLB8 PE=1
SV=1
Length = 247
Score = 123 bits (309), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 105/194 (54%)
Query: 36 KLLNRHGTVHQFMGGGRTADVLLWKRRRVSFGVIVVATVAWLIFERSGLPFLSVCSDVLL 95
+L +R +H +GGG++ADVLLW+ +++S V++ AT W++FE FLS+ LL
Sbjct: 44 RLFDRQKPIHHVLGGGKSADVLLWRNKKISASVLMGATAIWVLFEWINFHFLSLVCYALL 103
Query: 96 LLIVLMFFRANFAAFRNKQLESLPELEVSEEMVNNAAASFRVKINYLLLMAHDITVGKDF 155
L ++ F +N + F N+ +P L + ++ + ++N LL D+ +
Sbjct: 104 LGMIAQFVWSNASGFLNRSQSRVPRLVLPKDFFAEVGVAVGKEVNRGLLFLQDLACKGNL 163
Query: 156 RLFFQVVAYLWLLSAIGSYFSFFTLAYIGTLLSITVPALYSRFEARVDRYCGMIHKSISQ 215
+ F V LW+ + +GS +F T+ YIG + + T+P LY R+E VD + +
Sbjct: 164 KQFLMAVIGLWVAAMVGSCCNFLTVLYIGFVGAHTMPVLYERYEDEVDGFMDSMIMKFHS 223
Query: 216 HYKVVDENVISRIP 229
HYK +D +SRIP
Sbjct: 224 HYKKLDTGFLSRIP 237
>sp|Q9M392|RTNLL_ARATH Reticulon-like protein B12 OS=Arabidopsis thaliana GN=RTNLB12 PE=2
SV=1
Length = 203
Score = 120 bits (301), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 65/164 (39%), Positives = 101/164 (61%)
Query: 36 KLLNRHGTVHQFMGGGRTADVLLWKRRRVSFGVIVVATVAWLIFERSGLPFLSVCSDVLL 95
KL NR T+H+ +GGG ADV+LW+++ VS G++ V +W++FE ++ S VLL
Sbjct: 7 KLFNRDRTIHEILGGGIVADVMLWRKKNVSVGIVTVTIASWMVFEAFAYTIFTLISSVLL 66
Query: 96 LLIVLMFFRANFAAFRNKQLESLPELEVSEEMVNNAAASFRVKINYLLLMAHDITVGKDF 155
LL+ ++F + A+ N+ LPE ++SE M A+ R+ +N LL ++HDI + +D
Sbjct: 67 LLLSILFLWSKSASILNRPSPPLPEFQISEAMAEEASIWLRIHVNKLLQVSHDIAMARDS 126
Query: 156 RLFFQVVAYLWLLSAIGSYFSFFTLAYIGTLLSITVPALYSRFE 199
L+ +V L+LLS IGS F TL + L+ +TVPA Y R+E
Sbjct: 127 ELYTKVAVSLFLLSLIGSLMDFQTLCHTSVLVVMTVPAFYERYE 170
>sp|Q9M145|RTNLG_ARATH Reticulon-like protein B7 OS=Arabidopsis thaliana GN=RTNLB7 PE=3
SV=2
Length = 244
Score = 108 bits (270), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 107/197 (54%), Gaps = 5/197 (2%)
Query: 35 FKLLNRHGTVHQFMGGGRTADVLLWKRRRVSFGVIVVATVAWLIFERSGLPFL-SVCSDV 93
+++ R +H +GGG+ ADVLLW+ ++V+ G++ TV WL+F G L S+C
Sbjct: 52 YRMFGRERPIHMVLGGGKPADVLLWRDKKVTLGLLSAVTVIWLLFGFGGRRLLTSLCRGS 111
Query: 94 LLLLIVLMFFRANFAAFRNKQLESLPELEVSEEMVNNAAASFRVKINYLLLMAHDITVGK 153
+L L++ + NK E++ ++ + E+ + AA++ ++N I + +
Sbjct: 112 ILFLLLSFLWSNAL----NKSPENMMDIYIPEKPLLQAASAMTFELNCAFATLRSIALER 167
Query: 154 DFRLFFQVVAYLWLLSAIGSYFSFFTLAYIGTLLSITVPALYSRFEARVDRYCGMIHKSI 213
D + F V LWL+S IG++FSF +L YI +L TVP LY ++E +D +
Sbjct: 168 DIKNFVMAVIGLWLVSVIGNWFSFLSLLYICFVLIHTVPMLYEKYEDEIDPIAEKAVIEM 227
Query: 214 SQHYKVVDENVISRIPR 230
+HY+V + +S+IP
Sbjct: 228 KKHYQVFEAKFLSKIPH 244
>sp|A2RVT6|RTNLN_ARATH Reticulon-like protein B14 OS=Arabidopsis thaliana GN=RTNLB14 PE=2
SV=2
Length = 215
Score = 94.7 bits (234), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 106/195 (54%), Gaps = 6/195 (3%)
Query: 44 VHQFMGGGRTADVLLWKRRRVSFGVIVVATVAWLIFERSGLPFLSVCSDVLLLLIVLMFF 103
++ +GGGR AD++ WK ++ S ++ V T+ W +FE PF++ +LLL I +
Sbjct: 22 LYHNLGGGRFADIMFWKNKKESGTILGVFTLIWFLFEVVEYPFITFLCQILLLFIFIFLI 81
Query: 104 RANFAAFR--NKQLESLPELEVSEEMVNNAAASFRVKINYLLLMAHDITVGKDFRLFFQV 161
+ + + + S+ +L +SE +N F KIN+ ++ +DI+ GKDFRL F
Sbjct: 82 WSYIGSSQLIQSKPPSINDLRISE---SNWRFLFN-KINWFIIKLYDISSGKDFRLLFLA 137
Query: 162 VAYLWLLSAIGSYFSFFTLAYIGTLLSITVPALYSRFEARVDRYCGMIHKSISQHYKVVD 221
V LW+LS +G+YFS TL YI + T+P LY ++E + + + + +
Sbjct: 138 VVSLWILSVVGNYFSSLTLLYIVFVGLETIPMLYEQYEEELTYAASKSGRDMKKLLNKFN 197
Query: 222 ENVISRIPRTLSKDK 236
VI++IP+ +K +
Sbjct: 198 SKVINKIPKAQAKTR 212
>sp|O64837|RTNLM_ARATH Reticulon-like protein B13 OS=Arabidopsis thaliana GN=RTNLB13 PE=2
SV=1
Length = 206
Score = 79.3 bits (194), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 86/172 (50%)
Query: 55 DVLLWKRRRVSFGVIVVATVAWLIFERSGLPFLSVCSDVLLLLIVLMFFRANFAAFRNKQ 114
D+ LW+R++++F ++V+T W++ G +++ S + + ++ ++F + +K
Sbjct: 18 DIYLWRRKKLAFSTLLVSTSTWILLSFYGFTTITIVSWIGIAVVSMIFLWGSLLRLLSKV 77
Query: 115 LESLPELEVSEEMVNNAAASFRVKINYLLLMAHDITVGKDFRLFFQVVAYLWLLSAIGSY 174
L LEVSEE V S R+ + ++ + ++ +F + V W+LS IG+
Sbjct: 78 EPELSGLEVSEEFVVETVRSCRMLMEEMVRWMFRVGAESEWFVFARTVLGFWILSRIGNL 137
Query: 175 FSFFTLAYIGTLLSITVPALYSRFEARVDRYCGMIHKSISQHYKVVDENVIS 226
F T +IG ++ +TVP L+ + ++ ++ G + Y E ++
Sbjct: 138 LDFHTCLFIGLVMGLTVPKLWEEYGDQIQKHLGSLKDKSKGAYNTTHEKILE 189
>sp|Q9ZU43|RTNLO_ARATH Reticulon-like protein B15 OS=Arabidopsis thaliana GN=RTNLB15 PE=2
SV=2
Length = 191
Score = 75.5 bits (184), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 99/190 (52%), Gaps = 10/190 (5%)
Query: 44 VHQFMGGGRTADVLLWKRRRVSFGVIVVATVAWLIFERSGLPFLSVCSDVLLLLIVLMFF 103
V Q +G G AD+ LWK + S +V+AT+ W + E + + +LLLL++++F
Sbjct: 4 VDQILGDGAVADLCLWKDKINSGITLVMATLFWFLLEFMEARLVPLLCSILLLLMLILFL 63
Query: 104 RANFAAFRNKQLESLPELEVSEEMVNNAAASFRVKINYL---LLMAHDITVGKDFRLFFQ 160
A F + PE +N + + + + LLM ++I GKD + F +
Sbjct: 64 WAKFGEVFFTRRPPTPE------ELNQPDSPLKALFSMMEGHLLMLYEIAYGKDNKTFLK 117
Query: 161 VVAYLWLLSAIGSYFSFFTLAYIGTLLSITVPALYSRFEARVDRYCGMIHKSISQHYKVV 220
+ Y+ ++ IGSY S T+ YI + S+T+P +Y +F+ +D + G + + + +V
Sbjct: 118 TILYVAIIYNIGSYISLLTILYICLVCSMTIPVVYMQFQELIDSFMGKVSEEKNNLLEVF 177
Query: 221 DENVISRIPR 230
+ V+S+IPR
Sbjct: 178 KQ-VVSKIPR 186
>sp|Q28D16|RTN3_XENTR Reticulon-3 OS=Xenopus tropicalis GN=rtn3 PE=2 SV=1
Length = 213
Score = 58.5 bits (140), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 94/195 (48%), Gaps = 16/195 (8%)
Query: 50 GGRTADVLLWKRRRVSFGVIVVATVAWLIFERSGLPFLSVCSDVLL-LLIVLMFFRANFA 108
G D+L W+ + S G++ T+ L+ + +SV S ++L LL V + +R +
Sbjct: 22 GCAVQDLLYWRDVKQS-GMVFGGTMV-LLLSLAAFSIISVISYLVLSLLAVTISYRVYKS 79
Query: 109 AFR--NKQLESLP-------ELEVSEEMVNNAAASFRVKINYLLLMAHDITVGKDFRLFF 159
+ K E P ++ +S + A ++ +N+ L + + +D
Sbjct: 80 VLQAVQKTDEGHPFKPLLEKDIALSSDAFQKALSTSLAHVNHALKYIVRLFLVEDLVDSL 139
Query: 160 QVVAYLWLLSAIGSYFSFFTLAYIGTLLSITVPALYSRFEARVDRYCGMIHKSISQHYKV 219
++ +WL++ +G+ F+ TL +G LL+ T P +Y +++ ++D Y ++H H K
Sbjct: 140 KLALLMWLMTYVGAVFNGITLLILGVLLAFTAPIVYEKYKVQIDHYVSLVH----SHVKS 195
Query: 220 VDENVISRIPRTLSK 234
+ E + +++P L K
Sbjct: 196 ITEKIQAKLPGALKK 210
>sp|Q68EW1|RTN3B_XENLA Reticulon-3-B OS=Xenopus laevis GN=rtn3-b PE=2 SV=1
Length = 214
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 93/195 (47%), Gaps = 16/195 (8%)
Query: 50 GGRTADVLLWKRRRVSFGVIVVATVAWLIFERSGLPFLSVCSDVLL-LLIVLMFFRANFA 108
G D+L W+ + S G++ T+ L+ + +SV S ++L LL V + FR +
Sbjct: 23 GCAVRDLLYWRDVKQS-GMVFGGTMV-LLLSLAAFSIISVISYLVLSLLSVTISFRVYKS 80
Query: 109 AFR--NKQLESLP-------ELEVSEEMVNNAAASFRVKINYLLLMAHDITVGKDFRLFF 159
+ K E P ++ +S + +S +N+ L + + +D
Sbjct: 81 VLQAVQKTEEGHPFKPLLEKDIALSSDSFQKGLSSSLAHVNHALKSIVRLFLVEDLVDSL 140
Query: 160 QVVAYLWLLSAIGSYFSFFTLAYIGTLLSITVPALYSRFEARVDRYCGMIHKSISQHYKV 219
++ +WL++ IG+ F+ TL +G LL+ T P +Y +++ ++D Y ++H + K
Sbjct: 141 KLALLMWLMTYIGAVFNGITLLILGVLLAFTTPLVYEKYKVQIDHYVSLVHSQV----KS 196
Query: 220 VDENVISRIPRTLSK 234
+ E + +++P L K
Sbjct: 197 ITEKIQAKLPGALKK 211
>sp|Q5J6M8|RTN3A_XENLA Reticulon-3-A OS=Xenopus laevis GN=rtn3-a PE=2 SV=2
Length = 214
Score = 54.7 bits (130), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 94/195 (48%), Gaps = 16/195 (8%)
Query: 50 GGRTADVLLWKRRRVSFGVIVVATVAWLIFERSGLPFLSVCSDVLL-LLIVLMFFRANFA 108
G D+L W+ + S G++ T+ L+ + +SV S ++L LL V + +R +
Sbjct: 23 GCAVRDLLYWRDVKQS-GMVFGGTMV-LLLSLAAFSIISVISYLVLSLLTVTISYRVYKS 80
Query: 109 AFR--NKQLESLPELEVSEEMVNNAAASFR-------VKINYLLLMAHDITVGKDFRLFF 159
+ K E P + E+ + ++ SF+ +N+ L + + D
Sbjct: 81 VLQAVQKTDEGHPFKPLLEKDITLSSDSFQKALTASLAHVNHALKYIVRLFLVDDLVDSL 140
Query: 160 QVVAYLWLLSAIGSYFSFFTLAYIGTLLSITVPALYSRFEARVDRYCGMIHKSISQHYKV 219
++ +WL++ +G+ F+ TL +G LL+ T P +Y +++ ++D Y ++H + K
Sbjct: 141 KLALLMWLMTYVGAVFNGITLLILGVLLTFTAPIVYEKYKVQIDHYVSLVHSQV----KS 196
Query: 220 VDENVISRIPRTLSK 234
+ E + +++P L K
Sbjct: 197 ITEKIQAKLPGALKK 211
>sp|Q9ES97|RTN3_MOUSE Reticulon-3 OS=Mus musculus GN=Rtn3 PE=1 SV=2
Length = 964
Score = 53.9 bits (128), Expect = 9e-07, Method: Composition-based stats.
Identities = 42/185 (22%), Positives = 86/185 (46%), Gaps = 16/185 (8%)
Query: 55 DVLLWKRRRVSFGVIVVATVAWLIFERSGLPFLSVCSDVLL-LLIVLMFFRANFAAFR-- 111
D++ W R V V T ++ + +SV S ++L LL V + FR + +
Sbjct: 778 DLIFW--RDVKKTGFVFGTTLIMLLSLAAFSVISVVSYLILALLSVTISFRVYKSVIQAV 835
Query: 112 NKQLESLP-------ELEVSEEMVNNAAASFRVKINYLLLMAHDITVGKDFRLFFQVVAY 164
K E P ++ +S E +N + V +N L + + + +D ++ +
Sbjct: 836 QKSEEGHPFKAYLDVDITLSSEAFHNYMNAAMVHVNKALKLIIRLFLVEDLVDSLKLAVF 895
Query: 165 LWLLSAIGSYFSFFTLAYIGTLLSITVPALYSRFEARVDRYCGMIHKSISQHYKVVDENV 224
+WL++ +G+ F+ TL + LL +VP +Y +++ ++D Y G+ K + E +
Sbjct: 896 MWLMTYVGAVFNGITLLILAELLVFSVPIVYEKYKTQIDHYVGIAR----DQTKSIVEKI 951
Query: 225 ISRIP 229
+++P
Sbjct: 952 QAKLP 956
>sp|O95197|RTN3_HUMAN Reticulon-3 OS=Homo sapiens GN=RTN3 PE=1 SV=2
Length = 1032
Score = 53.9 bits (128), Expect = 1e-06, Method: Composition-based stats.
Identities = 43/185 (23%), Positives = 86/185 (46%), Gaps = 16/185 (8%)
Query: 55 DVLLWKRRRVSFGVIVVATVAWLIFERSGLPFLSVCSDVLL-LLIVLMFFRANFAAFR-- 111
D++ W R V V T ++ + +SV S ++L LL V + FR + +
Sbjct: 846 DLIFW--RDVKKTGFVFGTTLIMLLSLAAFSVISVVSYLILALLSVTISFRIYKSVIQAV 903
Query: 112 NKQLESLP-------ELEVSEEMVNNAAASFRVKINYLLLMAHDITVGKDFRLFFQVVAY 164
K E P ++ +S E +N + V IN L + + + +D ++ +
Sbjct: 904 QKSEEGHPFKAYLDVDITLSSEAFHNYMNAAMVHINRALKLIIRLFLVEDLVDSLKLAVF 963
Query: 165 LWLLSAIGSYFSFFTLAYIGTLLSITVPALYSRFEARVDRYCGMIHKSISQHYKVVDENV 224
+WL++ +G+ F+ TL + LL +VP +Y +++ ++D Y G+ K + E +
Sbjct: 964 MWLMTYVGAVFNGITLLILAELLIFSVPIVYEKYKTQIDHYVGIAR----DQTKSIVEKI 1019
Query: 225 ISRIP 229
+++P
Sbjct: 1020 QAKLP 1024
>sp|Q6RJR6|RTN3_RAT Reticulon-3 OS=Rattus norvegicus GN=Rtn3 PE=1 SV=1
Length = 940
Score = 52.0 bits (123), Expect = 4e-06, Method: Composition-based stats.
Identities = 41/185 (22%), Positives = 86/185 (46%), Gaps = 16/185 (8%)
Query: 55 DVLLWKRRRVSFGVIVVATVAWLIFERSGLPFLSVCSDVLL-LLIVLMFFRANFAAFR-- 111
D++ W R V V T ++ + +SV S ++L LL V + FR + +
Sbjct: 754 DLIFW--RDVKKTGFVFGTTLIMLLSLAAFSVISVVSYLILALLSVTISFRVYKSVIQAV 811
Query: 112 NKQLESLP-------ELEVSEEMVNNAAASFRVKINYLLLMAHDITVGKDFRLFFQVVAY 164
K E P ++ +S E ++ + V +N L + + + +D ++ +
Sbjct: 812 QKSEEGHPFKAYLDVDITLSSEAFHSYMNAAMVHVNKALKLIIRLFLVEDLVDSLKLAVF 871
Query: 165 LWLLSAIGSYFSFFTLAYIGTLLSITVPALYSRFEARVDRYCGMIHKSISQHYKVVDENV 224
+WL++ +G+ F+ TL + LL +VP +Y +++ ++D Y G+ K + E +
Sbjct: 872 MWLMTYVGAVFNGITLLILAELLVFSVPIVYEKYKTQIDHYVGIAR----DQTKSIVEKI 927
Query: 225 ISRIP 229
+++P
Sbjct: 928 QAKLP 932
>sp|Q5MY90|RTN1B_XENLA Reticulon-1-B OS=Xenopus laevis GN=rtn1-b PE=2 SV=1
Length = 752
Score = 51.2 bits (121), Expect = 6e-06, Method: Composition-based stats.
Identities = 23/116 (19%), Positives = 61/116 (52%), Gaps = 4/116 (3%)
Query: 120 ELEVSEEMVNNAAASFRVKINYLLLMAHDITVGKDFRLFFQVVAYLWLLSAIGSYFSFFT 179
E+ +S+E + F++ N + + + +D + +WLL+ +G+ F+ T
Sbjct: 641 EISLSQEQIQKYTGCFQLYTNSIAKELRRLFLVQDLVDSLKFAVLMWLLTYVGALFNGLT 700
Query: 180 LAYIGTLLSITVPALYSRFEARVDRYCGMIHKSISQHYKVVDENVISRIPRTLSKD 235
L + + ++P +Y +++A++D+Y G++ +++ ++ + ++IP T K+
Sbjct: 701 LLIMAVVSMFSLPVVYDKYQAQIDQYLGLVRTNMN----IIVTKIQAKIPGTKQKE 752
>sp|Q99P72|RTN4_MOUSE Reticulon-4 OS=Mus musculus GN=Rtn4 PE=1 SV=2
Length = 1162
Score = 50.1 bits (118), Expect = 1e-05, Method: Composition-based stats.
Identities = 41/171 (23%), Positives = 82/171 (47%), Gaps = 16/171 (9%)
Query: 55 DVLLWKRRRVSFGVIVVATVAWLIFERSGLPFLSVCSDVLL-LLIVLMFFRANFAAFRNK 113
D+L W+ + + GV+ A++ +L+ + +SV + + L LL V + FR +
Sbjct: 977 DLLYWRDIKKT-GVVFGASL-FLLLSLTVFSIVSVTAYIALALLSVTISFRIYKGVIQAI 1034
Query: 114 Q-----------LESLPELEVSEEMVNNAAASFRVKINYLLLMAHDITVGKDFRLFFQVV 162
Q LES E+ +SEE+V + S +N + + + D +
Sbjct: 1035 QKSDEGHPFRAYLES--EVAISEELVQKYSNSALGHVNSTIKELRRLFLVDDLVDSLKFA 1092
Query: 163 AYLWLLSAIGSYFSFFTLAYIGTLLSITVPALYSRFEARVDRYCGMIHKSI 213
+W+ + +G+ F+ TL + + ++P +Y R +A++D Y G+ +KS+
Sbjct: 1093 VLMWVFTYVGALFNGLTLLILALISLFSIPVIYERHQAQIDHYLGLANKSV 1143
>sp|Q08D83|RTN3_BOVIN Reticulon-3 OS=Bos taurus GN=RTN3 PE=2 SV=1
Length = 256
Score = 48.9 bits (115), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 86/185 (46%), Gaps = 16/185 (8%)
Query: 55 DVLLWKRRRVSFGVIVVATVAWLIFERSGLPFLSVCSDVLL-LLIVLMFFRANFAAFR-- 111
D++ W R V V T ++ + +SV S ++L LL V + FR + +
Sbjct: 70 DLIFW--RDVKKTGFVFGTTLIMLLSLAAFSVISVVSYLILALLSVTISFRVYKSVIQAV 127
Query: 112 NKQLESLP-------ELEVSEEMVNNAAASFRVKINYLLLMAHDITVGKDFRLFFQVVAY 164
K E P ++ +S E +N + V IN L + + + +D ++ +
Sbjct: 128 QKSEEGHPFKAYLDVDITLSSEAFHNYVNAAMVHINRALKLIIRLFLVEDLVDSLKLAVF 187
Query: 165 LWLLSAIGSYFSFFTLAYIGTLLSITVPALYSRFEARVDRYCGMIHKSISQHYKVVDENV 224
+WL++ +G+ F+ TL + LL ++P +Y +++ ++D Y G+ K + E +
Sbjct: 188 MWLMTYVGAVFNGITLLILAELLVFSIPIVYEKYKTQIDHYVGIAR----DQTKSIVEKI 243
Query: 225 ISRIP 229
+++P
Sbjct: 244 QAKLP 248
>sp|Q9NQC3|RTN4_HUMAN Reticulon-4 OS=Homo sapiens GN=RTN4 PE=1 SV=2
Length = 1192
Score = 48.9 bits (115), Expect = 3e-05, Method: Composition-based stats.
Identities = 41/171 (23%), Positives = 82/171 (47%), Gaps = 16/171 (9%)
Query: 55 DVLLWKRRRVSFGVIVVATVAWLIFERSGLPFLSVCSDVLL-LLIVLMFFRANFAAFRNK 113
D+L W+ + + GV+ A++ +L+ + +SV + + L LL V + FR +
Sbjct: 1007 DLLYWRDIKKT-GVVFGASL-FLLLSLTVFSIVSVTAYIALALLSVTISFRIYKGVIQAI 1064
Query: 114 Q-----------LESLPELEVSEEMVNNAAASFRVKINYLLLMAHDITVGKDFRLFFQVV 162
Q LES E+ +SEE+V + S +N + + + D +
Sbjct: 1065 QKSDEGHPFRAYLES--EVAISEELVQKYSNSALGHVNCTIKELRRLFLVDDLVDSLKFA 1122
Query: 163 AYLWLLSAIGSYFSFFTLAYIGTLLSITVPALYSRFEARVDRYCGMIHKSI 213
+W+ + +G+ F+ TL + + +VP +Y R +A++D Y G+ +K++
Sbjct: 1123 VLMWVFTYVGALFNGLTLLILALISLFSVPVIYERHQAQIDHYLGLANKNV 1173
>sp|Q64548|RTN1_RAT Reticulon-1 OS=Rattus norvegicus GN=Rtn1 PE=2 SV=1
Length = 777
Score = 48.5 bits (114), Expect = 4e-05, Method: Composition-based stats.
Identities = 25/110 (22%), Positives = 54/110 (49%), Gaps = 4/110 (3%)
Query: 120 ELEVSEEMVNNAAASFRVKINYLLLMAHDITVGKDFRLFFQVVAYLWLLSAIGSYFSFFT 179
E+ +S+E + ++ +N L + + +D + +WLL+ +G+ F+ T
Sbjct: 665 EITLSQEQIQKYTDCLQLYVNSTLKELRRLFLVQDLVDSLKFAVLMWLLTYVGALFNGLT 724
Query: 180 LAYIGTLLSITVPALYSRFEARVDRYCGMIHKSISQHYKVVDENVISRIP 229
L + + T+P +Y + +A+VD+Y G++ H V + ++IP
Sbjct: 725 LLLMAVVSMFTLPVVYVKHQAQVDQYLGLVRT----HINTVVAKIQAKIP 770
>sp|Q8K0T0|RTN1_MOUSE Reticulon-1 OS=Mus musculus GN=Rtn1 PE=1 SV=1
Length = 780
Score = 48.5 bits (114), Expect = 4e-05, Method: Composition-based stats.
Identities = 25/110 (22%), Positives = 54/110 (49%), Gaps = 4/110 (3%)
Query: 120 ELEVSEEMVNNAAASFRVKINYLLLMAHDITVGKDFRLFFQVVAYLWLLSAIGSYFSFFT 179
E+ +S+E + ++ +N L + + +D + +WLL+ +G+ F+ T
Sbjct: 668 EITLSQEQIQKYTDCLQLYVNSTLKELRRLFLVQDLVDSLKFAVLMWLLTYVGALFNGLT 727
Query: 180 LAYIGTLLSITVPALYSRFEARVDRYCGMIHKSISQHYKVVDENVISRIP 229
L + + T+P +Y + +A+VD+Y G++ H V + ++IP
Sbjct: 728 LLLMAVVSMFTLPVVYVKHQAQVDQYLGLVRT----HINTVVAKIQAKIP 773
>sp|Q9JK11|RTN4_RAT Reticulon-4 OS=Rattus norvegicus GN=Rtn4 PE=1 SV=1
Length = 1163
Score = 48.5 bits (114), Expect = 5e-05, Method: Composition-based stats.
Identities = 40/171 (23%), Positives = 81/171 (47%), Gaps = 16/171 (9%)
Query: 55 DVLLWKRRRVSFGVIVVATVAWLIFERSGLPFLSVCSDVLL-LLIVLMFFRANFAAFRNK 113
D+L W+ + + GV+ A++ +L+ + +SV + + L LL V + FR +
Sbjct: 978 DLLYWRDIKKT-GVVFGASL-FLLLSLTVFSIVSVTAYIALALLSVTISFRIYKGVIQAI 1035
Query: 114 Q-----------LESLPELEVSEEMVNNAAASFRVKINYLLLMAHDITVGKDFRLFFQVV 162
Q LES E+ +SEE+V + S +N + + + D +
Sbjct: 1036 QKSDEGHPFRAYLES--EVAISEELVQKYSNSALGHVNSTIKELRRLFLVDDLVDSLKFA 1093
Query: 163 AYLWLLSAIGSYFSFFTLAYIGTLLSITVPALYSRFEARVDRYCGMIHKSI 213
+W+ + +G+ F+ TL + + ++P +Y R + ++D Y G+ +KS+
Sbjct: 1094 VLMWVFTYVGALFNGLTLLILALISLFSIPVIYERHQVQIDHYLGLANKSV 1144
>sp|Q5RBL9|RTN3_PONAB Reticulon-3 OS=Pongo abelii GN=RTN3 PE=2 SV=1
Length = 236
Score = 48.1 bits (113), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 86/185 (46%), Gaps = 16/185 (8%)
Query: 55 DVLLWKRRRVSFGVIVVATVAWLIFERSGLPFLSVCSDVLL-LLIVLMFFRANFAAFR-- 111
D++ W R V V T ++ + +SV S ++L LL V + FR + +
Sbjct: 50 DLIFW--RDVKKTGFVFGTTLIMLLSLAAFSVISVVSYLILALLSVTISFRIYKSVIQAV 107
Query: 112 NKQLESLP-------ELEVSEEMVNNAAASFRVKINYLLLMAHDITVGKDFRLFFQVVAY 164
K E P ++ +S E +N + V IN L + + + +D ++ +
Sbjct: 108 QKSEEGHPFKAYLDVDITLSSEAFHNYMNAAMVHINRALKLIIRLFLVEDLVDSLKLAVF 167
Query: 165 LWLLSAIGSYFSFFTLAYIGTLLSITVPALYSRFEARVDRYCGMIHKSISQHYKVVDENV 224
+WL++ +G+ F+ TL + LL +VP +Y +++ ++D Y G+ K + E +
Sbjct: 168 MWLMTYVGAVFNGITLLILAELLIFSVPIVYEKYKTQIDHYVGIAR----DQTKSIVEKI 223
Query: 225 ISRIP 229
+++P
Sbjct: 224 QAKLP 228
>sp|A9X4U2|HSDD3_ARATH 3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 3
OS=Arabidopsis thaliana GN=3BETAHSD/D3 PE=2 SV=2
Length = 561
Score = 47.8 bits (112), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 64/139 (46%), Gaps = 9/139 (6%)
Query: 41 HGTVHQFMGGGRTADVLLWKRRRVSFGVIVVATVAWLIFERSGLPFLSVCSDVLLLLIVL 100
T Q +G G+ AD+LLW+ + +F +V + + F SG F S + +L + V
Sbjct: 367 QSTADQLLGCGKVADILLWRNEKKTFVSFLVLNLFYYWFFFSGNTFTSSAAQLLFIFAVA 426
Query: 101 M----FFRANFAAFRNKQLESLP--ELEVSEEMVNNAAASFRVKINYLLLMAHDITVGKD 154
+ F + F Q+ +P E+SE V + ++ V N + ++ G D
Sbjct: 427 LYGVSFVPSKIFGF---QVNKIPPWRFEISESAVRDLSSDIVVVWNQGVRSFKSLSSGGD 483
Query: 155 FRLFFQVVAYLWLLSAIGS 173
+ FF++ L+LL I S
Sbjct: 484 WIKFFKIAGSLYLLKLIVS 502
>sp|A7MC64|RTN1_XENTR Reticulon-1 OS=Xenopus tropicalis GN=rtn1 PE=2 SV=2
Length = 764
Score = 47.8 bits (112), Expect = 8e-05, Method: Composition-based stats.
Identities = 22/116 (18%), Positives = 59/116 (50%), Gaps = 4/116 (3%)
Query: 120 ELEVSEEMVNNAAASFRVKINYLLLMAHDITVGKDFRLFFQVVAYLWLLSAIGSYFSFFT 179
E+ +S+E + + N ++ + + +D + +WLL+ +G+ F+ T
Sbjct: 653 EISLSQEQIQKYTDCLQAYTNSIVKELRRLFLVQDLVDSLKFAVLMWLLTYVGALFNGLT 712
Query: 180 LAYIGTLLSITVPALYSRFEARVDRYCGMIHKSISQHYKVVDENVISRIPRTLSKD 235
L + + ++P +Y +++A++D+Y G++ +++ + + ++IP T K+
Sbjct: 713 LLIMAVVSMFSLPVVYDKYQAQIDQYLGLVRTNMN----TIVTKIQAKIPGTKQKE 764
>sp|Q5IS59|RTN1_PANTR Reticulon-1 OS=Pan troglodytes GN=RTN1 PE=2 SV=1
Length = 776
Score = 47.4 bits (111), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/110 (21%), Positives = 53/110 (48%), Gaps = 4/110 (3%)
Query: 120 ELEVSEEMVNNAAASFRVKINYLLLMAHDITVGKDFRLFFQVVAYLWLLSAIGSYFSFFT 179
E+ +S+E + + +N L + + +D + +WLL+ +G+ F+ T
Sbjct: 664 EITLSQEQIQKYTDCLQFYVNSTLKELRRLFLVQDLVDSLKFAVLMWLLTYVGALFNGLT 723
Query: 180 LAYIGTLLSITVPALYSRFEARVDRYCGMIHKSISQHYKVVDENVISRIP 229
L + + T+P +Y + +A++D+Y G++ H V + ++IP
Sbjct: 724 LLLMAVVSMFTLPVVYVKHQAQIDQYLGLVRT----HINAVVAKIQAKIP 769
>sp|Q16799|RTN1_HUMAN Reticulon-1 OS=Homo sapiens GN=RTN1 PE=1 SV=1
Length = 776
Score = 47.4 bits (111), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/110 (21%), Positives = 53/110 (48%), Gaps = 4/110 (3%)
Query: 120 ELEVSEEMVNNAAASFRVKINYLLLMAHDITVGKDFRLFFQVVAYLWLLSAIGSYFSFFT 179
E+ +S+E + + +N L + + +D + +WLL+ +G+ F+ T
Sbjct: 664 EITLSQEQIQKYTDCLQFYVNSTLKELRRLFLVQDLVDSLKFAVLMWLLTYVGALFNGLT 723
Query: 180 LAYIGTLLSITVPALYSRFEARVDRYCGMIHKSISQHYKVVDENVISRIP 229
L + + T+P +Y + +A++D+Y G++ H V + ++IP
Sbjct: 724 LLLMAVVSMFTLPVVYVKHQAQIDQYLGLVRT----HINAVVAKIQAKIP 769
>sp|Q6IFY7|RTN1A_XENLA Reticulon-1-A OS=Xenopus laevis GN=rtn1-a PE=2 SV=1
Length = 207
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/125 (20%), Positives = 60/125 (48%), Gaps = 22/125 (17%)
Query: 120 ELEVSEEMVNNAAASFRVKINYLLLMAHDITVGKDFRLFFQV---------VAYLWLLSA 170
E+ +S+E + +V N ++ K+ R F V +WLL+
Sbjct: 96 EISLSQEQIQKYTDCLQVYTN---------SIAKELRRLFLVQDLVDSLKFAVLMWLLTY 146
Query: 171 IGSYFSFFTLAYIGTLLSITVPALYSRFEARVDRYCGMIHKSISQHYKVVDENVISRIPR 230
+G+ F+ TL + + ++P +Y +++A++D+Y G++ +++ + + ++IP
Sbjct: 147 VGALFNGLTLLIMAVVSMFSLPVVYDKYQAQIDQYLGLVRTNMN----TIMTKIQAKIPG 202
Query: 231 TLSKD 235
T K+
Sbjct: 203 TKQKE 207
>sp|Q67ZE1|HSDD2_ARATH 3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 2
OS=Arabidopsis thaliana GN=3BETAHSD/D2 PE=2 SV=2
Length = 564
Score = 44.7 bits (104), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 71/161 (44%), Gaps = 4/161 (2%)
Query: 46 QFMGGGRTADVLLWKRRRVSFGVIVVATVAWLIFERSGLPFLSVCSDVLLLLIVLMFFRA 105
+ +GGG+ AD LLWK + + I + + F +G ++ S LL+ V +F
Sbjct: 377 RILGGGKVADTLLWKDLKQTLIAIFILISIYYNFVATGSTVVTALSKALLVASVFLFLHG 436
Query: 106 NFA-AFRNKQLESLP--ELEVSEEMVNNAAASFRVKINYLLLMAHDITVGKDFRLFFQVV 162
+E +P + +S++ ++ + S N + + G D+ FF+VV
Sbjct: 437 ILPEKIFGYTVEKIPASQFHLSKDSSHDLSLSVISSWNTTVKALRSLCQGNDWSFFFKVV 496
Query: 163 AYLWLLSAIGSYFSFFTLAYIGTLLSITVPALYSRFEARVD 203
L LS G+ S ++ IG ++ +Y + E +D
Sbjct: 497 FVLLALSLAGA-ISLHSIFVIGLPIAFLAFLVYEKKEQEID 536
>sp|O70622|RTN2_MOUSE Reticulon-2 OS=Mus musculus GN=Rtn2 PE=1 SV=1
Length = 471
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 50/97 (51%), Gaps = 13/97 (13%)
Query: 144 LMAHDITVGKDFRLFF---------QVVAYLWLLSAIGSYFSFFTLAYIGTLLSITVPAL 194
+ +H ++ R FF ++ ++L+ +G+ F+ TL +G + TVP L
Sbjct: 362 IASHVVSTATQLRHFFLVEDLVDSLKLALLFYILTFVGAIFNGLTLVILGVVALFTVPLL 421
Query: 195 YSRFEARVDRYCGMIHKSISQHYKVVDENVISRIPRT 231
Y + +A++D+Y G++ +S H K + ++IP T
Sbjct: 422 YRQHQAQIDQYVGLVTNQLS-HIKA---KIRAKIPGT 454
>sp|O75298|RTN2_HUMAN Reticulon-2 OS=Homo sapiens GN=RTN2 PE=1 SV=1
Length = 545
Score = 39.7 bits (91), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 39/64 (60%), Gaps = 4/64 (6%)
Query: 166 WLLSAIGSYFSFFTLAYIGTLLSITVPALYSRFEARVDRYCGMIHKSISQHYKVVDENVI 225
++L+ +G+ F+ TL +G + T+P LY + +A++D+Y G++ +S H K +
Sbjct: 466 YILTFVGAIFNGLTLLILGVIGLFTIPLLYRQHQAQIDQYVGLVTNQLS-HIKA---KIR 521
Query: 226 SRIP 229
++IP
Sbjct: 522 AKIP 525
>sp|P0C941|RTNLU_ARATH Reticulon-like protein B23 OS=Arabidopsis thaliana GN=RTNLB23 PE=2
SV=1
Length = 155
Score = 37.0 bits (84), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 55/124 (44%), Gaps = 1/124 (0%)
Query: 65 SFGVIVVATVAWLIFERSGLPFLSVCSDVLLLLIVLMFFRANFAAFRNKQLESLP-ELEV 123
+ G+++ T+ + LS+ SDVL++L+ + N + P E ++
Sbjct: 7 AIGLLISGTLVYHHCANRNATLLSLISDVLIVLLSSLAILGLLFRHLNVSVPVDPLEWQI 66
Query: 124 SEEMVNNAAASFRVKINYLLLMAHDITVGKDFRLFFQVVAYLWLLSAIGSYFSFFTLAYI 183
S++ N A + + G D RLF +VV L+ L+A+G S T+AY
Sbjct: 67 SQDTACNIVARLANTVGAAESVLRVAATGHDKRLFVKVVICLYFLAALGRIISGVTIAYA 126
Query: 184 GTLL 187
G L
Sbjct: 127 GLCL 130
>sp|Q8GWH5|RTNLT_ARATH Reticulon-like protein B22 OS=Arabidopsis thaliana GN=RTNLB22 PE=2
SV=1
Length = 164
Score = 36.2 bits (82), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 58/127 (45%), Gaps = 7/127 (5%)
Query: 65 SFGVIVVATVAWLIFERSGLPFLSVCSDVLLLLIVLMFFRANFAAFRNKQLESLP----E 120
+ G+++ T+ + LS+ SDV ++L+ + FR + S+P E
Sbjct: 7 AMGLLISGTLVYYHCAYRNATLLSLFSDVFIVLLCSLAILGLL--FRQLNV-SVPVDPLE 63
Query: 121 LEVSEEMVNNAAASFRVKINYLLLMAHDITVGKDFRLFFQVVAYLWLLSAIGSYFSFFTL 180
++S++ +N A + + G D RLF +VV L+ LSA+G S T+
Sbjct: 64 WQISQDTASNIVARLANTVGAAEGVLRVAATGHDKRLFVKVVICLYFLSALGRLISGVTV 123
Query: 181 AYIGTLL 187
AY G L
Sbjct: 124 AYAGLCL 130
>sp|Q12443|RTN2_YEAST Reticulon-like protein 2 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=RTN2 PE=1 SV=1
Length = 393
Score = 35.4 bits (80), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 9/85 (10%)
Query: 156 RLFFQVVAYLWLLSAIGSYFSFFTLAYIGTLLSITVPALYSRFEARVDRYCG-----MIH 210
R F + L+ L + + FS T+ + T+ TVP +Y R +AR+DR +IH
Sbjct: 135 RNNFTIGVSLYFLHGLFAIFSMNTVLIMTTIFLYTVPLIYDRKQARIDRAIDRMKDLVIH 194
Query: 211 KSISQHYKVVD--ENVISRI--PRT 231
+ + KVV+ E I +I P+T
Sbjct: 195 RFHKNYNKVVEKTEPYIDKIIPPQT 219
>sp|Q6DR04|RTNLQ_ARATH Reticulon-like protein B17 OS=Arabidopsis thaliana GN=RTNLB17 PE=2
SV=1
Length = 431
Score = 34.3 bits (77), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 39/189 (20%), Positives = 74/189 (39%), Gaps = 26/189 (13%)
Query: 50 GGRTADVLLWKRRRVSFGVIVVATVAWLIFERSGLPFLSVC-------------SDVLLL 96
G +D+++W+ V + W F L FLS C S++ L+
Sbjct: 165 GEIISDLVMWRD--------VAKSTLWFGF--GCLSFLSSCFAKGVNFSVFSAVSNLGLV 214
Query: 97 LIVLMFFRANFAAFRNKQLESLPELEVSEEMVNNAAASFRVKINYLLLMAHDITVGKDFR 156
L+ F +N+ + VSE+ V +A N+ + ++ G+
Sbjct: 215 LLCGSFLSNTLCQRKNEDTKR--AFHVSEDDVLRSARRVLPATNFFISKTSELFSGEP-S 271
Query: 157 LFFQVVAYLWLLSAIGSYFSFFTLAYIGTLLSITVPALYSRFEARVDRYCGMIHKSISQH 216
+ +V +L L + G + + L+ G LS T+P LYS + ++ + + I +
Sbjct: 272 MTLKVTPFLLLGAEYGHLITLWRLSAFGFFLSFTIPKLYSCYTHQISQKVERVKTRIGEA 331
Query: 217 YKVVDENVI 225
+ V I
Sbjct: 332 WGVCSHKKI 340
>sp|Q4FZ76|RTN2_XENLA Reticulon-2 OS=Xenopus laevis GN=rtn2 PE=2 SV=1
Length = 321
Score = 33.9 bits (76), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Query: 157 LFFQVVAYLWLLSAIGSYFSFFTLAYIGTLLSITVPALYSRFEARVDRYCGMIHKSIS 214
L F V+ YL L+ +G+ F+ T+ + + + T P LY + + +VD Y ++ K ++
Sbjct: 248 LKFLVIVYL--LTYVGAVFNGITVLLLCVIGAFTFPILYKQHQTQVDHYVSLVSKKVN 303
>sp|Q04947|RTN1_YEAST Reticulon-like protein 1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=RTN1 PE=1 SV=1
Length = 295
Score = 32.7 bits (73), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 12/45 (26%), Positives = 26/45 (57%)
Query: 159 FQVVAYLWLLSAIGSYFSFFTLAYIGTLLSITVPALYSRFEARVD 203
F+ L+LL S+FS +T+ ++ + + T+P +Y ++ +D
Sbjct: 128 FKTAVALFLLHKFFSWFSIWTIVFVADIFTFTLPVIYHSYKHEID 172
>sp|Q4FZ58|RTN2_XENTR Reticulon-2 OS=Xenopus tropicalis GN=rtn2 PE=2 SV=2
Length = 321
Score = 32.3 bits (72), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 13/47 (27%), Positives = 28/47 (59%)
Query: 165 LWLLSAIGSYFSFFTLAYIGTLLSITVPALYSRFEARVDRYCGMIHK 211
++LL+ +G+ F+ T+ + + + T P LY + + +VD Y ++ K
Sbjct: 254 IYLLTYVGAVFNGITVLLLCVIGAFTFPILYKQHQTQVDHYVSLVSK 300
>sp|Q8UWJ4|DLLD_DANRE Delta-like protein D OS=Danio rerio GN=dld PE=1 SV=2
Length = 717
Score = 32.0 bits (71), Expect = 3.4, Method: Composition-based stats.
Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 8/55 (14%)
Query: 83 GLPFLSVCSDVLLLLIVL-------MFFRANFAAFRNKQLESLPELEVSEEMVNN 130
G P+ +VC+ ++L+L+VL ++ R R++Q++S E+E + NN
Sbjct: 543 GFPWTAVCAGIILVLLVLIGGSVFVIYIRLKLQQ-RSQQIDSHSEIETMNNLTNN 596
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.326 0.138 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 80,846,916
Number of Sequences: 539616
Number of extensions: 3051402
Number of successful extensions: 11842
Number of sequences better than 100.0: 49
Number of HSP's better than 100.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 11786
Number of HSP's gapped (non-prelim): 51
length of query: 238
length of database: 191,569,459
effective HSP length: 114
effective length of query: 124
effective length of database: 130,053,235
effective search space: 16126601140
effective search space used: 16126601140
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 59 (27.3 bits)