Your job contains 1 sequence.
>026436
MTSSPAPTVAGSSFHGNINSSSSLISQGSYLDQFCSKKKVQEPRRVSSVIRDPSHAQDHV
IAERKRREKLNQRFIALSALVPGLKKTDKASILGDSIKYLKQLQERVKALEEQTSKKTVE
SMIIVKKSQMIYTDDETSPTDINFDAQSNQYLPEIEVRVSDRDVLIRIHCEKNNNKGHLA
NILSEIENVHHLSVLSCNVLPFGNSTVDITVVAQMDVESDVTVKDLVKNLQPALRKFM
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 026436
(238 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2137574 - symbol:AT4G37850 "AT4G37850" species... 504 2.9e-48 1
UNIPROTKB|Q75GI1 - symbol:OSJNBa0013A09.16 "Putative tran... 493 4.2e-47 1
TAIR|locus:2062225 - symbol:AT2G22750 "AT2G22750" species... 486 2.3e-46 1
TAIR|locus:2062235 - symbol:NAI1 "AT2G22770" species:3702... 449 1.9e-42 1
TAIR|locus:2062230 - symbol:AT2G22760 "AT2G22760" species... 440 1.7e-41 1
UNIPROTKB|Q2QLR0 - symbol:LOC_Os12g43620 "Helix-loop-heli... 355 1.8e-32 1
UNIPROTKB|Q8LSP3 - symbol:OJ1203D03.3 "Helix-loop-helix D... 343 3.3e-31 1
UNIPROTKB|Q84R60 - symbol:OSJNBb0113I20.8 "Putative ammon... 334 3.0e-30 1
UNIPROTKB|Q84R79 - symbol:OSJNBb0113I20.1 "Putative ammon... 313 5.0e-28 1
UNIPROTKB|Q336P5 - symbol:Os10g0575000 "Os10g0575000 prot... 234 1.3e-18 1
TAIR|locus:2141055 - symbol:MYC4 "AT4G17880" species:3702... 223 1.5e-17 1
TAIR|locus:2035609 - symbol:MYC2 "AT1G32640" species:3702... 223 1.7e-17 1
TAIR|locus:2178555 - symbol:MYC3 "AT5G46760" species:3702... 214 1.4e-16 1
TAIR|locus:2172932 - symbol:NIG1 "AT5G46830" species:3702... 204 1.2e-15 1
TAIR|locus:2134583 - symbol:AT4G00870 "AT4G00870" species... 201 1.7e-15 1
TAIR|locus:2118524 - symbol:TT8 "AT4G09820" species:3702 ... 170 2.0e-15 2
TAIR|locus:2039094 - symbol:AIB "AT2G46510" species:3702 ... 196 1.1e-14 1
UNIPROTKB|Q7XPS7 - symbol:OSJNBa0065O17.4 "OSJNBa0065O17.... 188 8.3e-14 1
TAIR|locus:2026629 - symbol:EGL3 "AT1G63650" species:3702... 182 4.0e-13 1
TAIR|locus:2079512 - symbol:AT3G61950 "AT3G61950" species... 177 4.6e-13 1
TAIR|locus:2130619 - symbol:AT4G16430 "AT4G16430" species... 174 1.9e-12 1
UNIPROTKB|Q53L62 - symbol:LOC_Os11g15210 "Helix-loop-heli... 172 2.9e-12 1
UNIPROTKB|Q948Y2 - symbol:Plw-OSB2 "R-type basic helix-lo... 171 3.7e-12 1
TAIR|locus:2035237 - symbol:AT1G01260 "AT1G01260" species... 172 4.7e-12 1
UNIPROTKB|Q657A4 - symbol:P0022F12.30 "Regulatory protein... 167 6.4e-12 1
UNIPROTKB|Q8H8E4 - symbol:OJ1006F06.1 "Putative bHLH tran... 168 7.0e-12 1
TAIR|locus:504954829 - symbol:GL3 "AT5G41315" species:370... 167 1.8e-11 1
TAIR|locus:2155503 - symbol:ALC "AT5G67110" species:3702 ... 151 1.5e-10 1
UNIPROTKB|Q2R3F6 - symbol:Os11g0523700 "Helix-loop-helix ... 158 4.9e-10 1
TAIR|locus:2093746 - symbol:FMA "AT3G24140" species:3702 ... 125 7.1e-10 2
TAIR|locus:2039445 - symbol:AMS "AT2G16910" species:3702 ... 155 2.4e-09 1
UNIPROTKB|Q6ZBI4 - symbol:P0623F08.11 "Phaseolin G-box bi... 150 2.5e-09 1
UNIPROTKB|Q948F6 - symbol:OSJNBa0049O12.18 "Putative SPAT... 143 2.6e-09 2
UNIPROTKB|Q5SMX4 - symbol:P0498B01.36 "cDNA clone:J033115... 153 3.4e-09 1
TAIR|locus:2009537 - symbol:AT1G22490 "AT1G22490" species... 150 4.2e-09 1
TAIR|locus:2123954 - symbol:AT4G29930 "AT4G29930" species... 147 7.0e-09 1
TAIR|locus:2154197 - symbol:SPCH "AT5G53210" species:3702... 125 7.9e-09 2
TAIR|locus:2155725 - symbol:bHLH093 "AT5G65640" species:3... 148 1.2e-08 1
UNIPROTKB|Q5SMX2 - symbol:P0498B01.25 "Basic helix-loop-h... 148 1.7e-08 1
TAIR|locus:2126876 - symbol:UNE10 "AT4G00050" species:370... 147 2.2e-08 1
TAIR|locus:2082400 - symbol:MUTE "AT3G06120" species:3702... 138 2.3e-08 1
TAIR|locus:2046198 - symbol:FRU "AT2G28160" species:3702 ... 145 2.5e-08 1
UNIPROTKB|Q5KQG3 - symbol:OSJNBb0086G17.12 "Putative unch... 114 3.3e-08 2
UNIPROTKB|Q7FA23 - symbol:OSJNBa0058K23.6 "Os04g0618600 p... 131 3.6e-08 1
TAIR|locus:2044387 - symbol:AT2G46810 "AT2G46810" species... 145 3.7e-08 1
UNIPROTKB|Q5VRS4 - symbol:OSJNBa0015I14.14 "Basic helix-l... 143 4.7e-08 1
UNIPROTKB|Q2QMN2 - symbol:LOC_Os12g40590 "Helix-loop-heli... 141 5.0e-08 1
TAIR|locus:2129710 - symbol:bHLH104 "AT4G14410" species:3... 141 6.2e-08 1
UNIPROTKB|Q336V8 - symbol:Os10g0544200 "Os10g0544200 prot... 143 7.2e-08 1
TAIR|locus:2090847 - symbol:ICE1 "AT3G26744" species:3702... 144 8.3e-08 1
UNIPROTKB|Q69IU0 - symbol:P0498F03.15 "Putative MYC-relat... 140 8.8e-08 1
TAIR|locus:2061634 - symbol:PIL5 "phytochrome interacting... 143 1.1e-07 1
TAIR|locus:2164605 - symbol:AT5G56960 "AT5G56960" species... 142 1.4e-07 1
TAIR|locus:2020003 - symbol:AT1G10610 "AT1G10610" species... 141 1.7e-07 1
UNIPROTKB|Q8GRJ1 - symbol:OJ1343_B12.103 "Transcription f... 140 2.1e-07 1
TAIR|locus:2115080 - symbol:SPT "AT4G36930" species:3702 ... 139 2.3e-07 1
TAIR|locus:2142419 - symbol:AT5G10570 "AT5G10570" species... 137 2.9e-07 1
TAIR|locus:2077680 - symbol:PIL6 "AT3G59060" species:3702... 139 3.2e-07 1
TAIR|locus:2040287 - symbol:BHLH100 "basic helix-loop-hel... 133 4.1e-07 1
UNIPROTKB|Q6YUS3 - symbol:OSJNBb0088N06.15 "BHLH protein-... 139 4.5e-07 1
UNIPROTKB|Q7X8R0 - symbol:OSJNBa0083N12.3 "OSJNBa0083N12.... 138 4.5e-07 1
TAIR|locus:2141206 - symbol:DYT1 "AT4G21330" species:3702... 130 4.7e-07 1
TAIR|locus:2127023 - symbol:ATMYC1 species:3702 "Arabidop... 139 4.8e-07 1
TAIR|locus:2053733 - symbol:PIF4 "AT2G43010" species:3702... 136 7.1e-07 1
TAIR|locus:2207061 - symbol:AT1G72210 "AT1G72210" species... 133 9.4e-07 1
TAIR|locus:2012345 - symbol:PIF3 "AT1G09530" species:3702... 134 1.2e-06 2
UNIPROTKB|Q84LF9 - symbol:RERJ1 "Transcription Factor" sp... 131 1.6e-06 1
TAIR|locus:2116977 - symbol:AT4G01460 "AT4G01460" species... 131 1.6e-06 1
TAIR|locus:4010713915 - symbol:AT4G28811 species:3702 "Ar... 133 2.5e-06 1
TAIR|locus:2042556 - symbol:AT2G31210 "AT2G31210" species... 117 2.5e-06 2
UNIPROTKB|Q94LR3 - symbol:OSJNBa0010C11.7 "Helix-loop-hel... 122 3.5e-06 1
UNIPROTKB|Q8S0C6 - symbol:B1112D09.6 "Uncharacterized pro... 130 4.3e-06 1
TAIR|locus:2155543 - symbol:HEC1 "HECATE 1" species:3702 ... 125 4.4e-06 1
UNIPROTKB|Q7XKP5 - symbol:OSJNBb0013O03.11 "OSJNBb0013O03... 126 5.8e-06 1
TAIR|locus:2147760 - symbol:LRL3 "AT5G58010" species:3702... 126 6.0e-06 1
UNIPROTKB|Q5NAE0 - symbol:P0498A12.33 "Putative BP-5 prot... 130 6.0e-06 1
TAIR|locus:2047555 - symbol:LRL1 "AT2G24260" species:3702... 127 6.3e-06 1
UNIPROTKB|Q6ETQ5 - symbol:P0613F08.25 "Basic helix-loop-h... 128 6.5e-06 1
TAIR|locus:2126624 - symbol:LRL2 "AT4G30980" species:3702... 126 6.6e-06 1
TAIR|locus:2074865 - symbol:HEC2 "AT3G50330" species:3702... 122 9.0e-06 1
TAIR|locus:2117788 - symbol:AT4G28800 species:3702 "Arabi... 127 9.6e-06 1
TAIR|locus:2092216 - symbol:bHLH121 "AT3G19860" species:3... 124 1.3e-05 1
UNIPROTKB|Q69Y51 - symbol:P0698A06.26-2 "Putative bHLH tr... 125 1.4e-05 1
TAIR|locus:2089418 - symbol:AT3G21330 "AT3G21330" species... 124 1.6e-05 1
TAIR|locus:2168235 - symbol:AT5G65320 "AT5G65320" species... 122 1.8e-05 1
TAIR|locus:2085964 - symbol:BHLH32 "AT3G25710" species:37... 122 2.5e-05 1
TAIR|locus:4010713916 - symbol:AT4G28815 species:3702 "Ar... 121 2.6e-05 1
TAIR|locus:2163163 - symbol:PIF7 "AT5G61270" species:3702... 122 2.8e-05 1
TAIR|locus:2080600 - symbol:bHLH38 "basic helix-loop-heli... 119 2.8e-05 1
TAIR|locus:2135169 - symbol:bHLH11 "AT4G36060" species:37... 120 2.9e-05 1
UNIPROTKB|Q58GE3 - symbol:UDT1 "Undeveloped tapetum 1" sp... 118 3.0e-05 1
TAIR|locus:2158392 - symbol:BHLH92 "AT5G43650" species:37... 113 3.3e-05 2
TAIR|locus:2117773 - symbol:AT4G28790 species:3702 "Arabi... 122 3.4e-05 1
TAIR|locus:2144791 - symbol:HEC3 "AT5G09750" species:3702... 117 3.4e-05 1
TAIR|locus:504956068 - symbol:AT2G31215 "AT2G31215" speci... 101 3.6e-05 1
TAIR|locus:2012393 - symbol:AT1G68810 "AT1G68810" species... 121 3.7e-05 1
TAIR|locus:2080615 - symbol:bHLH39 "basic helix-loop-heli... 118 4.0e-05 1
TAIR|locus:2201906 - symbol:AT1G10120 "AT1G10120" species... 120 4.8e-05 1
UNIPROTKB|Q6Z7E7 - symbol:P0020C11.18 "Putative bHLH tran... 122 5.0e-05 1
UNIPROTKB|Q69TX2 - symbol:P0021C04.13 "BHLH protein-like"... 115 5.0e-05 1
WARNING: Descriptions of 56 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2137574 [details] [associations]
symbol:AT4G37850 "AT4G37850" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL035709
EMBL:AL161592 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000240300
ProtClustDB:CLSN2690865 EMBL:AF488567 IPI:IPI00544527 PIR:T06032
RefSeq:NP_195498.3 UniGene:At.31223 ProteinModelPortal:Q9T072
SMR:Q9T072 EnsemblPlants:AT4G37850.1 GeneID:829941
KEGG:ath:AT4G37850 TAIR:At4g37850 eggNOG:NOG262524
InParanoid:Q8S3F0 PhylomeDB:Q9T072 Genevestigator:Q9T072
Uniprot:Q9T072
Length = 328
Score = 504 (182.5 bits), Expect = 2.9e-48, P = 2.9e-48
Identities = 107/195 (54%), Positives = 146/195 (74%)
Query: 44 RRVSSVIRDPSHAQDHVIAERKRREKLNQRFIALSALVPGLKKTDKASILGDSIKYLKQL 103
+R R+ S+AQDH+IAERKRREKL QRF+ALSALVPGLKK DKAS+LGD++K++K L
Sbjct: 138 KRAQPFSRNQSNAQDHIIAERKRREKLTQRFVALSALVPGLKKMDKASVLGDALKHIKYL 197
Query: 104 QERVKALEEQTSKKTVESMIIVKKSQMIYTDDETSPTDINFDAQSNQYLPEIEVRVSDRD 163
QERV LEEQ ++ +ESM++VKKS++I D+ S + D S+ LPEIEVR SD D
Sbjct: 198 QERVGELEEQKKERRLESMVLVKKSKLILDDNNQSFSSSCEDGFSDLDLPEIEVRFSDED 257
Query: 164 VLIRIHCEKNNNKGHLANILSEIENVHHLSVLSCNVLPFGNSTVDITVVAQMDVESDVTV 223
VLI+I CEK KGHLA I++EIE +H L + + +VL FG T+DIT++A+ + + D+T+
Sbjct: 258 VLIKILCEKQ--KGHLAKIMAEIEKLHIL-ITNSSVLNFG-PTLDITIIAKKESDFDMTL 313
Query: 224 KDLVKNLQPALRKFM 238
D+VK+L+ AL F+
Sbjct: 314 MDVVKSLRSALSNFI 328
>UNIPROTKB|Q75GI1 [details] [associations]
symbol:OSJNBa0013A09.16 "Putative transcription factor"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0003677 EMBL:DP000009
EMBL:AP008209 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC145380
EMBL:AC135228 EMBL:AK120539 RefSeq:NP_001051131.1 UniGene:Os.7441
EnsemblPlants:LOC_Os03g51580.1 GeneID:4333965 KEGG:osa:4333965
OMA:DSCITEQ Uniprot:Q75GI1
Length = 359
Score = 493 (178.6 bits), Expect = 4.2e-47, P = 4.2e-47
Identities = 100/186 (53%), Positives = 138/186 (74%)
Query: 51 RDPSHAQDHVIAERKRREKLNQRFIALSALVPGLKKTDKASILGDSIKYLKQLQERVKAL 110
R S Q+H++AERKRREKL+QRFIALS +VPGLKK DKAS+LGD+IKY+KQLQ++VK L
Sbjct: 174 RPASQNQEHILAERKRREKLSQRFIALSKIVPGLKKMDKASVLGDAIKYVKQLQDQVKGL 233
Query: 111 EEQTSKKTVESMIIVKKSQMIYTDDETSPTDINFDA-QSNQYLPEIEVRVSDRDVLIRIH 169
EE+ ++ VE+ ++VKKSQ+ DD+ S D NFD ++ LPEIE RVS+R VL++IH
Sbjct: 234 EEEARRRPVEAAVLVKKSQLSADDDDGSSCDENFDGGEATAGLPEIEARVSERTVLVKIH 293
Query: 170 CEKNNNKGHLANILSEIENVHHLSVLSCNVLPFGNSTVDITVVAQMDVESDVTVKDLVKN 229
CE N KG L LSE+E + L++++ NVLPF +S++DIT++A ++VKD+VK
Sbjct: 294 CE--NRKGALITALSEVETIG-LTIMNTNVLPFTSSSLDITIMATAGENFSLSVKDIVKK 350
Query: 230 LQPALR 235
L A +
Sbjct: 351 LNQAFK 356
>TAIR|locus:2062225 [details] [associations]
symbol:AT2G22750 "AT2G22750" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AC005617 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC006340
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AF488562 EMBL:DQ446549
EMBL:DQ653015 IPI:IPI00538506 IPI:IPI00846694 PIR:D84616
RefSeq:NP_001077944.1 RefSeq:NP_179860.2 UniGene:At.39395
ProteinModelPortal:Q1PF17 SMR:Q1PF17 EnsemblPlants:AT2G22750.2
GeneID:816805 KEGG:ath:AT2G22750 TAIR:At2g22750 eggNOG:NOG266714
HOGENOM:HOG000240300 InParanoid:Q8S3F3 OMA:FDISIIA PhylomeDB:Q1PF17
ProtClustDB:CLSN2690865 Genevestigator:Q1PF17 Uniprot:Q1PF17
Length = 305
Score = 486 (176.1 bits), Expect = 2.3e-46, P = 2.3e-46
Identities = 104/201 (51%), Positives = 147/201 (73%)
Query: 40 VQEPRRVSSVIRDPSHAQDHVIAERKRREKLNQRFIALSALVPGLKKTDKASILGDSIKY 99
++ +R S+ R S+AQDH++AERKRREKL QRF+ALSAL+PGLKK DKAS+LGD+IK+
Sbjct: 108 IRGTKRAQSLTRSQSNAQDHILAERKRREKLTQRFVALSALIPGLKKMDKASVLGDAIKH 167
Query: 100 LKQLQERVKALEEQTSKKTVESMIIVKKSQMIYTDDE----TSPTDINFDAQSNQYLPEI 155
+K LQE VK EEQ +KT+ES+++VKKS ++ ++ +S +D N ++ S+ LPEI
Sbjct: 168 IKYLQESVKEYEEQKKEKTMESVVLVKKSSLVLDENHQPSSSSSSDGNRNSSSSN-LPEI 226
Query: 156 EVRVSDRDVLIRIHCEKNNNKGHLANILSEIENVHHLSVLSCNVLPFGNSTVDITVVAQM 215
EVRVS +DVLI+I CEK KG++ I+ EIE + LS+ + NVLPFG T DI+++AQ
Sbjct: 227 EVRVSGKDVLIKILCEKQ--KGNVIKIMGEIEKLG-LSITNSNVLPFG-PTFDISIIAQK 282
Query: 216 DVESDVTVKDLVKNLQPALRK 236
+ D+ ++D+VKNL L K
Sbjct: 283 NNNFDMKIEDVVKNLSFGLSK 303
>TAIR|locus:2062235 [details] [associations]
symbol:NAI1 "AT2G22770" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IMP;TAS]
[GO:0007029 "endoplasmic reticulum organization" evidence=IMP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AC005617 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000240300 ProtClustDB:CLSN2690866
EMBL:AF488564 EMBL:AK176248 IPI:IPI00531737 PIR:F84616
RefSeq:NP_850031.2 UniGene:At.43434 ProteinModelPortal:Q8S3F1
SMR:Q8S3F1 STRING:Q8S3F1 PRIDE:Q8S3F1 EnsemblPlants:AT2G22770.1
GeneID:816807 KEGG:ath:AT2G22770 TAIR:At2g22770 eggNOG:NOG310015
InParanoid:Q8S3F1 OMA:TDEYLID PhylomeDB:Q8S3F1
Genevestigator:Q8S3F1 Uniprot:Q8S3F1
Length = 320
Score = 449 (163.1 bits), Expect = 1.9e-42, P = 1.9e-42
Identities = 103/198 (52%), Positives = 141/198 (71%)
Query: 51 RDPSHAQDHVIAERKRREKLNQRFIALSALVPGLKKTDKASILGDSIKYLKQLQERVKAL 110
R+P ++HV+AERKRR+KLN+R IALSAL+PGLKKTDKA++L D+IK+LKQLQERVK L
Sbjct: 125 REPHLLKEHVLAERKRRQKLNERLIALSALLPGLKKTDKATVLEDAIKHLKQLQERVKKL 184
Query: 111 EEQ--TSKKTVESMIIVKKSQMIYTDDETS----------PTDINFDAQS--NQYLPEIE 156
EE+ +KK +S+I+VK+SQ +Y DD++S P + D S Q +P IE
Sbjct: 185 EEERVVTKKMDQSIILVKRSQ-VYLDDDSSSYSSTCSAASPLSSSSDEVSIFKQTMPMIE 243
Query: 157 VRVSDRDVLIRIHCEKNNNKGHLANILSEIENVHHLSVLSCNVLPFGNSTVDITVVAQMD 216
RVSDRD+LIR+HCEKN KG + ILS +E L V++ LPFGNST+ IT++ +MD
Sbjct: 244 ARVSDRDLLIRVHCEKN--KGCMIKILSSLEKFR-LEVVNSFTLPFGNSTLVITILTKMD 300
Query: 217 VESDVTVKDLVKNLQPAL 234
+ V+++VKN++ AL
Sbjct: 301 NKFSRPVEEVVKNIRVAL 318
>TAIR|locus:2062230 [details] [associations]
symbol:AT2G22760 "AT2G22760" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AC005617 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC006340
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000240300
EMBL:AF488563 EMBL:DQ446550 EMBL:DQ653016 IPI:IPI00530407
PIR:E84616 RefSeq:NP_179861.2 UniGene:At.39393
ProteinModelPortal:Q1PF16 SMR:Q1PF16 IntAct:Q1PF16 PRIDE:Q1PF16
EnsemblPlants:AT2G22760.1 GeneID:816806 KEGG:ath:AT2G22760
TAIR:At2g22760 eggNOG:NOG292366 InParanoid:Q1PF16 OMA:GCMINIL
PhylomeDB:Q1PF16 ProtClustDB:CLSN2690866 Genevestigator:Q1PF16
Uniprot:Q1PF16
Length = 295
Score = 440 (159.9 bits), Expect = 1.7e-41, P = 1.7e-41
Identities = 94/186 (50%), Positives = 138/186 (74%)
Query: 51 RDPSHAQDHVIAERKRREKLNQRFIALSALVPGLKKTDKASILGDSIKYLKQLQERVKAL 110
R P A++HV+AERKRREKL+++FIALSAL+PGLKK DK +IL D+I +KQLQE+++ L
Sbjct: 112 RSPVLAKEHVLAERKRREKLSEKFIALSALLPGLKKADKVTILDDAISRMKQLQEQLRTL 171
Query: 111 -EEQTSKKTVESMIIVKKSQMIYTDDETSPTDINFDAQSNQYLPEIEVRVSDRDVLIRIH 169
EE+ + + +ESMI+VKKS++ + ++ + + +Q LPEIE ++S D+LIRI
Sbjct: 172 KEEKEATRQMESMILVKKSKVFFDEEPNLSCSPSVHIEFDQALPEIEAKISQNDILIRIL 231
Query: 170 CEKNNNKGHLANILSEIENVHHLSVLSCNVLPFGNSTVDITVVAQMDVESDVTV-KDLVK 228
CEK+ KG + NIL+ IEN L + + VLPFG+ST+DITV+AQMD + +++ KDLV+
Sbjct: 232 CEKS--KGCMINILNTIENFQ-LRIENSIVLPFGDSTLDITVLAQMDKDFSMSILKDLVR 288
Query: 229 NLQPAL 234
NL+ A+
Sbjct: 289 NLRLAM 294
>UNIPROTKB|Q2QLR0 [details] [associations]
symbol:LOC_Os12g43620 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:DP000011
KEGG:dosa:Os12t0632600-00 Gramene:Q2QLR0 OMA:TNVMPFP Uniprot:Q2QLR0
Length = 338
Score = 355 (130.0 bits), Expect = 1.8e-32, P = 1.8e-32
Identities = 78/168 (46%), Positives = 108/168 (64%)
Query: 47 SSVIRDPSHAQDHVIAERKRREKLNQRFIALSALVPGLKKTDKASILGDSIKYLKQLQER 106
SS P + QDH+IAER+RREK+NQRFI LS ++PGLKK DKA+ILGD++KY+K+LQE+
Sbjct: 156 SSSAAAPGYVQDHIIAERRRREKINQRFIELSTVIPGLKKMDKATILGDAVKYVKELQEK 215
Query: 107 VKALEEQTSKKTVESMIIVKKSQMIYTDDETSPTDINFDAQSNQYLPEIEVRVSDRDVLI 166
VK LEE+ +M++ K S S D +PEIEVRV +R VL+
Sbjct: 216 VKTLEEEDGGGRPAAMVVRKSS----CSGRQSAAG---DGDGEGRVPEIEVRVWERSVLV 268
Query: 167 RIHCEKNNNKGHLANILSEIENVHHLSVLSCNVLPFGNSTVDITVVAQ 214
R+ C N++G L +LSE+E + L + +V+PF STV IT+ A+
Sbjct: 269 RVQC--GNSRGLLVRLLSEVEELR-LGITHTSVMPFPASTVIITITAK 313
>UNIPROTKB|Q8LSP3 [details] [associations]
symbol:OJ1203D03.3 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
EMBL:DP000009 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC099732
EnsemblPlants:LOC_Os03g12760.1 KEGG:dosa:Os03t0229100-00
HOGENOM:HOG000239880 OMA:DSCLNIT Uniprot:Q8LSP3
Length = 451
Score = 343 (125.8 bits), Expect = 3.3e-31, P = 3.3e-31
Identities = 79/176 (44%), Positives = 115/176 (65%)
Query: 41 QEPRRVSSVIRDPSHAQDHVIAERKRREKLNQRFIALSALVPGLKKTDKASILGDSIKYL 100
Q P R S R P++AQ+HVIAERKRREKL Q+F+AL+ +VPGLKKTDK S+LG +I Y+
Sbjct: 273 QPPERRS---RPPANAQEHVIAERKRREKLQQQFVALATIVPGLKKTDKISLLGSTIDYV 329
Query: 101 KQLQERVKALEEQTSKKTVESMIIVKKSQMIYTDDET--SPTDINFDAQSNQYLPEIEVR 158
KQL+E+VKALEE S++T E + I DD+ S + D S+ P +E
Sbjct: 330 KQLEEKVKALEEG-SRRTAEPTTAFESKCRITVDDDDGGSASSGTDDGSSSSSSPTVEAS 388
Query: 159 VSDRDVLIRIHCEKNNNKGHLANILSEIENVHHLSVLSCNVLPFGNSTVDITVVAQ 214
+ VL++I C++ +G L ILSE+E LS+++ +V+PF +S ++IT+ A+
Sbjct: 389 IHGNTVLLKICCKER--RGLLVMILSELEK-QGLSIINTSVVPFTDSCLNITITAK 441
>UNIPROTKB|Q84R60 [details] [associations]
symbol:OSJNBb0113I20.8 "Putative ammonium transporter"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P22415 EMBL:AC116369 ProteinModelPortal:Q84R60 Gramene:Q84R60
Uniprot:Q84R60
Length = 353
Score = 334 (122.6 bits), Expect = 3.0e-30, P = 3.0e-30
Identities = 75/167 (44%), Positives = 110/167 (65%)
Query: 55 HAQDHVIAERKRREKLNQRFIALSALVPGLKKTDKASILGDSIKYLKQLQERVKALEEQT 114
+AQ+H+IAERKRREK+NQRFI LS ++PGLKK DKA+IL D+++Y+K++QE++ LE Q
Sbjct: 189 YAQEHIIAERKRREKINQRFIELSTVIPGLKKMDKATILSDAVRYVKEMQEKLSELE-QH 247
Query: 115 SKKTVESMIIVKKSQMIYTD-DETSPTDINFDAQSNQY------LPEIEVRVSDRDVLIR 167
VES I++KK + + D P + A S+ LPEIE ++S +V++R
Sbjct: 248 QNGGVESAILLKKPCIATSSSDGGCPAASSAVAGSSSSGTARSSLPEIEAKISHGNVMVR 307
Query: 168 IHCEKNNNKGHLANILSEIENVHHLSVLSCNVLPFGNSTVDITVVAQ 214
IH E NN KG L +L+ +E +H L + NV+PF T IT++A+
Sbjct: 308 IHGE-NNGKGSLVRLLAAVEGLH-LGITHTNVMPFSACTAIITIMAK 352
>UNIPROTKB|Q84R79 [details] [associations]
symbol:OSJNBb0113I20.1 "Putative ammonium transporter"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P22415 EMBL:AC116369 ProteinModelPortal:Q84R79 Gramene:Q84R79
Uniprot:Q84R79
Length = 301
Score = 313 (115.2 bits), Expect = 5.0e-28, P = 5.0e-28
Identities = 77/180 (42%), Positives = 118/180 (65%)
Query: 54 SHAQ-DHVIAERKRREKLNQRFIALSALVPGLKKTDKASILGDSIKYLKQLQERVKALEE 112
++AQ +HV+AERKRREK+NQRF+ LSA++P LKK DKA+IL D+ Y+++LQE++KALEE
Sbjct: 125 AYAQLEHVVAERKRREKINQRFMELSAVIPKLKKMDKATILSDAASYIRELQEKLKALEE 184
Query: 113 QTSKKTVESMIIVKKSQMIYTDDETSPTDINFDAQSNQYLP-EIEVRVSDRD--VLIRIH 169
Q + + E+ + SP A ++ +P EIEVR S + V++RIH
Sbjct: 185 QAAARVTEAAMATP-----------SPAR----AMNHLPVPPEIEVRCSPTNNVVMVRIH 229
Query: 170 CEKNNNKGHLANILSEIENVHHLSVLSCNVLPF--GNSTVDITVVAQMDVE-SDVTVKDL 226
CE N +G + IL+E+E +H L +++ NV+PF +T+ IT+ A+ + S+V V+DL
Sbjct: 230 CE--NGEGVIVRILAEVEEIH-LRIINANVMPFLDQGATMIITIAAKAKINRSEVKVQDL 286
>UNIPROTKB|Q336P5 [details] [associations]
symbol:Os10g0575000 "Os10g0575000 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:DP000086 EMBL:AP008216 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238207 InterPro:IPR025610
Pfam:PF14215 eggNOG:NOG295658 KO:K13422 RefSeq:NP_001065478.1
UniGene:Os.100484 STRING:Q336P5 GeneID:4349484 KEGG:osa:4349484
ProtClustDB:CLSN2698296 Uniprot:Q336P5
Length = 699
Score = 234 (87.4 bits), Expect = 1.3e-18, P = 1.3e-18
Identities = 57/140 (40%), Positives = 87/140 (62%)
Query: 58 DHVIAERKRREKLNQRFIALSALVPGLKKTDKASILGDSIKYLKQLQERVKALEEQTSKK 117
+HV AER+RREKLNQRF AL A+VP + K DKAS+LGD+I Y+ +L+ ++ ALE T K+
Sbjct: 524 NHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELRGKLTALE--TDKE 581
Query: 118 TVES-MIIVKKSQMIYTDDETSPTDINFDAQSNQYLPEIEVRVSDRDVLIRIHCEKNNNK 176
T++S M +KK + +P+ D + + EIE ++ + +IR+ C K N+
Sbjct: 582 TLQSQMESLKKER---DARPPAPSGGGGDGGARCHAVEIEAKILGLEAMIRVQCHKRNHP 638
Query: 177 G-HLANILSEIE-NVHHLSV 194
L L E++ +V+H SV
Sbjct: 639 AARLMTALRELDLDVYHASV 658
>TAIR|locus:2141055 [details] [associations]
symbol:MYC4 "AT4G17880" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009718 "anthocyanin-containing compound biosynthetic process"
evidence=IMP] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006952 "defense response"
evidence=IMP] [GO:0043425 "bHLH transcription factor binding"
evidence=IPI] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0045893 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0006952 GO:GO:0003677 GO:GO:0009718
GO:GO:0003700 GO:GO:0006351 EMBL:AL161547 EMBL:AL021889
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238207
InterPro:IPR025610 Pfam:PF14215 eggNOG:NOG295658
ProtClustDB:CLSN2686023 EMBL:AF251689 EMBL:AK221507 IPI:IPI00540927
PIR:T05074 RefSeq:NP_193522.1 UniGene:At.28316
ProteinModelPortal:O49687 SMR:O49687 EnsemblPlants:AT4G17880.1
GeneID:827511 KEGG:ath:AT4G17880 TAIR:At4g17880 InParanoid:O49687
OMA:SCERARQ PhylomeDB:O49687 Genevestigator:O49687 Uniprot:O49687
Length = 589
Score = 223 (83.6 bits), Expect = 1.5e-17, P = 1.5e-17
Identities = 63/181 (34%), Positives = 101/181 (55%)
Query: 36 SKKKVQEP-RRVSSVIRDPSHAQD----HVIAERKRREKLNQRFIALSALVPGLKKTDKA 90
S + V EP ++ R P++ ++ HV AER+RREKLNQRF +L A+VP + K DKA
Sbjct: 389 SNRVVVEPEKKPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYSLRAVVPNVSKMDKA 448
Query: 91 SILGDSIKYLKQLQERVKALEEQTSKKTVESMIIVKKSQMIYTDDETSPTDINFDAQSNQ 150
S+LGD+I Y+ +L+ +++ E + K+ ++ I V + + ++S D Q +
Sbjct: 449 SLLGDAISYISELKSKLQKAE--SDKEELQKQIDVMNKEA--GNAKSSVKDRKCLNQESS 504
Query: 151 YLPEIEV--RVSDRDVLIRIHCEKNNNKG-HLANILSEIE-NVHHLSVLSCNVLPFGNST 206
L E+EV ++ D +IRI C K N+ G L E++ V+H S+ N L +T
Sbjct: 505 VLIEMEVDVKIIGWDAMIRIQCSKRNHPGAKFMEALKELDLEVNHASLSVVNDLMIQQAT 564
Query: 207 V 207
V
Sbjct: 565 V 565
>TAIR|locus:2035609 [details] [associations]
symbol:MYC2 "AT1G32640" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0009867 "jasmonic acid mediated
signaling pathway" evidence=RCA;IMP] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0009963 "positive regulation of flavonoid biosynthetic process"
evidence=IEP;RCA] [GO:0043619 "regulation of transcription from RNA
polymerase II promoter in response to oxidative stress"
evidence=IMP] [GO:0051090 "regulation of sequence-specific DNA
binding transcription factor activity" evidence=IMP] [GO:2000068
"regulation of defense response to insect" evidence=IMP]
[GO:0009611 "response to wounding" evidence=IEP;RCA;TAS]
[GO:0010200 "response to chitin" evidence=IEP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009753 "response to jasmonic acid
stimulus" evidence=RCA;IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0006612 "protein
targeting to membrane" evidence=RCA] [GO:0009620 "response to
fungus" evidence=RCA] [GO:0009694 "jasmonic acid metabolic process"
evidence=RCA] [GO:0009695 "jasmonic acid biosynthetic process"
evidence=RCA] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=RCA] [GO:0009863 "salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA] [GO:0043069
"negative regulation of programmed cell death" evidence=RCA]
[GO:0009269 "response to desiccation" evidence=IEP] [GO:0009737
"response to abscisic acid stimulus" evidence=IEP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0009737 GO:GO:0005634
GO:GO:0045893 GO:GO:0009753 GO:GO:0009611 GO:GO:0009738
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0010200
EMBL:AC017118 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000238207 InterPro:IPR025610 Pfam:PF14215 GO:GO:0009269
GO:GO:0043619 GO:GO:0051090 eggNOG:NOG295658 GO:GO:0009963
EMBL:X99548 EMBL:AB000875 EMBL:AJ843256 EMBL:AY037203 EMBL:BT003042
EMBL:AF251691 IPI:IPI00543978 PIR:T52293 RefSeq:NP_174541.1
UniGene:At.22648 ProteinModelPortal:Q39204 SMR:Q39204 IntAct:Q39204
STRING:Q39204 PRIDE:Q39204 EnsemblPlants:AT1G32640.1 GeneID:840158
KEGG:ath:AT1G32640 GeneFarm:1895 TAIR:At1g32640 InParanoid:Q39204
KO:K13422 OMA:KRNHPAA PhylomeDB:Q39204 ProtClustDB:CLSN2682813
Genevestigator:Q39204 GermOnline:AT1G32640 GO:GO:2000068
Uniprot:Q39204
Length = 623
Score = 223 (83.6 bits), Expect = 1.7e-17, P = 1.7e-17
Identities = 60/177 (33%), Positives = 100/177 (56%)
Query: 38 KKVQEPRRVSSVIRDPSHAQD----HVIAERKRREKLNQRFIALSALVPGLKKTDKASIL 93
K+V +R R P++ ++ HV AER+RREKLNQRF AL A+VP + K DKAS+L
Sbjct: 428 KEVAVEKRPKKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLL 487
Query: 94 GDSIKYLKQLQERVKALEEQTSKKTVESMIIVKKSQMIYTDDETSPTDINFDAQSNQYLP 153
GD+I Y+ +L+ +V ++ ++ K +++ + K ++ S D++ S + +
Sbjct: 488 GDAIAYINELKSKV--VKTESEKLQIKNQLEEVKLELAGRKASASGGDMSSSCSSIKPVG 545
Query: 154 -EIEVRVSDRDVLIRIHCEKNNNKG-HLANILSEIE-NVHHLSVLSCNVLPFGNSTV 207
EIEV++ D +IR+ K N+ L + L ++E V+H S+ N L +TV
Sbjct: 546 MEIEVKIIGWDAMIRVESSKRNHPAARLMSALMDLELEVNHASMSVVNDLMIQQATV 602
>TAIR|locus:2178555 [details] [associations]
symbol:MYC3 "AT5G46760" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009718
"anthocyanin-containing compound biosynthetic process"
evidence=IMP] [GO:0009753 "response to jasmonic acid stimulus"
evidence=IMP] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006952 "defense response"
evidence=IMP] [GO:0043425 "bHLH transcription factor binding"
evidence=IPI] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0045893 GO:GO:0006952 GO:GO:0009753 GO:GO:0003677
GO:GO:0009718 GO:GO:0003700 GO:GO:0006351 EMBL:AB016882
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238207
InterPro:IPR025610 Pfam:PF14215 EMBL:AF251690 IPI:IPI00533290
RefSeq:NP_199488.1 UniGene:At.28315 ProteinModelPortal:Q9FIP9
SMR:Q9FIP9 DIP:DIP-58585N PaxDb:Q9FIP9 PRIDE:Q9FIP9
EnsemblPlants:AT5G46760.1 GeneID:834719 KEGG:ath:AT5G46760
TAIR:At5g46760 eggNOG:NOG295658 InParanoid:Q9FIP9 OMA:TASSIEM
PhylomeDB:Q9FIP9 ProtClustDB:CLSN2686023 Genevestigator:Q9FIP9
Uniprot:Q9FIP9
Length = 592
Score = 214 (80.4 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 55/155 (35%), Positives = 87/155 (56%)
Query: 58 DHVIAERKRREKLNQRFIALSALVPGLKKTDKASILGDSIKYLKQLQERVKALE---EQT 114
+HV AER+RREKLNQRF +L A+VP + K DKAS+LGD+I Y+ +L+ +++ E E+
Sbjct: 415 NHVEAERQRREKLNQRFYSLRAVVPNVSKMDKASLLGDAISYINELKSKLQQAESDKEEI 474
Query: 115 SKKTVESMIIVKKSQMIYTDDETSPTDINFDAQSNQYLPEIEVRVSDRDVLIRIHCEKNN 174
KK ++ M + N D+ ++ EI+V++ DV+IR+ C K +
Sbjct: 475 QKK-LDGMSKEGNNGKGCGSRAKERKSSNQDSTASSIEMEIDVKIIGWDVMIRVQCGKKD 533
Query: 175 NKG-HLANILSEIE-NVHHLSVLSCNVLPFGNSTV 207
+ G L E++ V+H S+ N L +TV
Sbjct: 534 HPGARFMEALKELDLEVNHASLSVVNDLMIQQATV 568
>TAIR|locus:2172932 [details] [associations]
symbol:NIG1 "AT5G46830" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;TAS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0005509 "calcium ion binding" evidence=IDA]
[GO:0009651 "response to salt stress" evidence=IEP] [GO:0042538
"hyperosmotic salinity response" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0005509
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000238207 InterPro:IPR025610 Pfam:PF14215 GO:GO:0042538
EMBL:AF252636 EMBL:AB022221 IPI:IPI00544679 RefSeq:NP_199495.1
UniGene:At.28311 ProteinModelPortal:Q9LUK7 SMR:Q9LUK7
EnsemblPlants:AT5G46830.1 GeneID:834727 KEGG:ath:AT5G46830
TAIR:At5g46830 eggNOG:NOG258937 InParanoid:Q9LUK7 OMA:HVEAERM
PhylomeDB:Q9LUK7 ProtClustDB:CLSN2914881 ArrayExpress:Q9LUK7
Genevestigator:Q9LUK7 Uniprot:Q9LUK7
Length = 511
Score = 204 (76.9 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 53/164 (32%), Positives = 93/164 (56%)
Query: 51 RDPSHAQD----HVIAERKRREKLNQRFIALSALVPGLKKTDKASILGDSIKYLKQLQER 106
R P+H +D HV AER RREKLN RF AL A+VP + K DK S+L D++ Y+ +L+ +
Sbjct: 332 RKPAHGRDKPLNHVEAERMRREKLNHRFYALRAVVPNVSKMDKTSLLEDAVCYINELKSK 391
Query: 107 VKALEEQTSKKTVESMIIVKKSQMIYTDDETSPTDINFDAQSNQYLPEIEVRVSDRD-VL 165
+ +E + K +E I + + I P+ ++ ++++ + +IEV++ + D +
Sbjct: 392 AENVELE--KHAIE--IQFNELKEIAGQRNAIPSVCKYEEKASEMM-KIEVKIMESDDAM 446
Query: 166 IRIHCEKNNNKG-HLANILSEIE-NVHHLSVLSCNVLPFGNSTV 207
+R+ K+++ G L N L ++E V+H S+ N L + V
Sbjct: 447 VRVESRKDHHPGARLMNALMDLELEVNHASISVMNDLMIQQANV 490
>TAIR|locus:2134583 [details] [associations]
symbol:AT4G00870 "AT4G00870" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AL161472 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238207 InterPro:IPR025610
Pfam:PF14215 EMBL:AF013294 EMBL:AJ519812 IPI:IPI00537799 PIR:T01559
RefSeq:NP_567195.1 UniGene:At.34506 ProteinModelPortal:O23090
SMR:O23090 EnsemblPlants:AT4G00870.1 GeneID:827990
KEGG:ath:AT4G00870 TAIR:At4g00870 eggNOG:NOG285642
InParanoid:O23090 OMA:SIECELM PhylomeDB:O23090
ProtClustDB:CLSN2917469 Genevestigator:O23090 Uniprot:O23090
Length = 423
Score = 201 (75.8 bits), Expect = 1.7e-15, P = 1.7e-15
Identities = 53/172 (30%), Positives = 96/172 (55%)
Query: 33 QFCSKKKVQ---EPRRVSSVIRDPSHAQ--DHVIAERKRREKLNQRFIALSALVPGLKKT 87
QF S++K + E RV++ ++ H HV AE++RREKLN RF AL A+VP + +
Sbjct: 219 QFGSERKRRRKLETTRVAAATKEKHHPAVLSHVEAEKQRREKLNHRFYALRAIVPKVSRM 278
Query: 88 DKASILGDSIKYLKQLQERVKALEEQTSKKTVESMIIVKKSQMIYTDDETSPTDINFD-- 145
DKAS+L D++ Y++ L+ ++ LE + K M + + ++ + TSP+ + +
Sbjct: 279 DKASLLSDAVSYIESLKSKIDDLETEIKK-----MKMTETDKLDNSSSNTSPSSVEYQVN 333
Query: 146 ---AQSNQYLP-EIEVRVSDRDVLIRIHCEK-NNNKGHLANILSEIE-NVHH 191
++SN+ E++V++ + +IR+ E N+ L + L E++ V H
Sbjct: 334 QKPSKSNRGSDLEVQVKIVGEEAIIRVQTENVNHPTSALMSALMEMDCRVQH 385
>TAIR|locus:2118524 [details] [associations]
symbol:TT8 "AT4G09820" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0009962 "regulation of flavonoid
biosynthetic process" evidence=TAS] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0005515 "protein binding" evidence=IPI] [GO:2000029 "regulation
of proanthocyanidin biosynthetic process" evidence=IEP] [GO:0010026
"trichome differentiation" evidence=IMP] [GO:0009718
"anthocyanin-containing compound biosynthetic process"
evidence=RCA] [GO:0009744 "response to sucrose stimulus"
evidence=RCA] [GO:0010224 "response to UV-B" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
InterPro:IPR025610 Pfam:PF14215 EMBL:AL161516 GO:GO:0009813
EMBL:AL049482 HOGENOM:HOG000237985 GO:GO:0010026 GO:GO:2000029
EMBL:AJ277509 EMBL:DQ446813 EMBL:DQ653187 IPI:IPI00530243
RefSeq:NP_192720.2 UniGene:At.10175 ProteinModelPortal:Q9FT81
SMR:Q9FT81 IntAct:Q9FT81 STRING:Q9FT81 PaxDb:Q9FT81 PRIDE:Q9FT81
EnsemblPlants:AT4G09820.1 GeneID:826571 KEGG:ath:AT4G09820
TAIR:At4g09820 eggNOG:NOG249918 InParanoid:Q9FT81 OMA:NEVDSKT
PhylomeDB:Q9FT81 ProtClustDB:CLSN2681600 Genevestigator:Q9FT81
Uniprot:Q9FT81
Length = 518
Score = 170 (64.9 bits), Expect = 2.0e-15, Sum P(2) = 2.0e-15
Identities = 37/72 (51%), Positives = 49/72 (68%)
Query: 51 RDPSHAQDHVIAERKRREKLNQRFIALSALVPGLKKTDKASILGDSIKYLKQLQERVKAL 110
R P HV+AER+RREKLN++FI L ++VP + K DK SILGD+I Y+ L++RV L
Sbjct: 356 RLPREDLSHVVAERRRREKLNEKFITLRSMVPFVTKMDKVSILGDTIAYVNHLRKRVHEL 415
Query: 111 E----EQTSKKT 118
E EQ K+T
Sbjct: 416 ENTHHEQQHKRT 427
Score = 55 (24.4 bits), Expect = 2.0e-15, Sum P(2) = 2.0e-15
Identities = 14/41 (34%), Positives = 23/41 (56%)
Query: 154 EIEVRVSDRDVLIRIHCEKNNNKGHLANILSEIENVHHLSV 194
E+EV + + DVL+ + CE + G L +IL + H L +
Sbjct: 437 EVEVSIIENDVLLEMRCEYRD--GLLLDILQVL---HELGI 472
>TAIR|locus:2039094 [details] [associations]
symbol:AIB "AT2G46510" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;IDA] [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0009611 "response to wounding" evidence=IEP;RCA]
[GO:0009737 "response to abscisic acid stimulus" evidence=RCA;IMP]
[GO:0006612 "protein targeting to membrane" evidence=RCA]
[GO:0007165 "signal transduction" evidence=RCA] [GO:0009414
"response to water deprivation" evidence=RCA] [GO:0009620 "response
to fungus" evidence=RCA] [GO:0009695 "jasmonic acid biosynthetic
process" evidence=RCA] [GO:0009723 "response to ethylene stimulus"
evidence=RCA] [GO:0009733 "response to auxin stimulus"
evidence=RCA] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=RCA] [GO:0009753 "response to jasmonic acid
stimulus" evidence=RCA] [GO:0009863 "salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0009867 "jasmonic acid
mediated signaling pathway" evidence=RCA] [GO:0010363 "regulation
of plant-type hypersensitive response" evidence=RCA] [GO:0042538
"hyperosmotic salinity response" evidence=RCA] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0009737
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009611
GO:GO:0009738 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
EMBL:AC006526 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC006418
EMBL:AY094399 IPI:IPI00535471 PIR:G84903 RefSeq:NP_566078.1
UniGene:At.19872 ProteinModelPortal:Q9ZPY8 SMR:Q9ZPY8 PaxDb:Q9ZPY8
PRIDE:Q9ZPY8 EnsemblPlants:AT2G46510.1 GeneID:819262
KEGG:ath:AT2G46510 TAIR:At2g46510 eggNOG:NOG313259
HOGENOM:HOG000238207 InParanoid:Q9ZPY8 OMA:KIMEDER PhylomeDB:Q9ZPY8
ProtClustDB:CLSN2917347 Genevestigator:Q9ZPY8 InterPro:IPR025610
Pfam:PF14215 Uniprot:Q9ZPY8
Length = 566
Score = 196 (74.1 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 51/142 (35%), Positives = 83/142 (58%)
Query: 58 DHVIAERKRREKLNQRFIALSALVPGLKKTDKASILGDSIKYLKQLQERVKALEEQTSKK 117
+HV AER+RREKLNQRF AL ++VP + K DKAS+LGD+I Y+K+LQE+VK +E++
Sbjct: 395 NHVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAISYIKELQEKVKIMEDERVG- 453
Query: 118 TVESMIIVKKSQMIYTDDETSPTDINFDAQSNQYLPEIEVRVSDRDVLIRIHCEKNNNKG 177
T +S+ +S I ++ SP +++ A + + + + + I +N+N
Sbjct: 454 TDKSL---SESNTITVEE--SP-EVDIQAMNEEVVVRVISPLDSHPASRIIQAMRNSNVS 507
Query: 178 HLANILSEIEN-VHHLSVLSCN 198
+ LS E+ + H V+ N
Sbjct: 508 LMEAKLSLAEDTMFHTFVIKSN 529
>UNIPROTKB|Q7XPS7 [details] [associations]
symbol:OSJNBa0065O17.4 "OSJNBa0065O17.4 protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
InterPro:IPR025610 Pfam:PF14215 EMBL:AL606682
ProteinModelPortal:Q7XPS7 Gramene:Q7XPS7 Uniprot:Q7XPS7
Length = 567
Score = 188 (71.2 bits), Expect = 8.3e-14, P = 8.3e-14
Identities = 42/124 (33%), Positives = 71/124 (57%)
Query: 48 SVIRDPSHAQDHVIAERKRREKLNQRFIALSALVPGLKKTDKASILGDSIKYLKQLQERV 107
+ + S ++HVI+ER+RREKLN+ F+ L ++VP + K DKASIL ++I YLK L++RV
Sbjct: 382 AALTQESGIKNHVISERRRREKLNEMFLILKSIVPSIHKVDKASILEETIAYLKVLEKRV 441
Query: 108 KALEEQTSKKTVESMIIVKKSQMIYTDDE-TSPTDINFDAQSNQYLPEIEVRVSDRDVLI 166
K LE + + ++ + T E S ++ + + + V V+D+ VL+
Sbjct: 442 KELESSSEPSHQRATETGQQRRCEITGKELVSEIGVSGGGDAGREHHHVNVTVTDKVVLL 501
Query: 167 RIHC 170
+ C
Sbjct: 502 EVQC 505
>TAIR|locus:2026629 [details] [associations]
symbol:EGL3 "AT1G63650" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009957 "epidermal
cell fate specification" evidence=RCA;IMP] [GO:0001708 "cell fate
specification" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009913 "epidermal cell
differentiation" evidence=RCA] [GO:0009965 "leaf morphogenesis"
evidence=RCA] [GO:0016570 "histone modification" evidence=RCA]
[GO:0048449 "floral organ formation" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
InterPro:IPR025610 Pfam:PF14215 EMBL:AF251687 EMBL:AF013465
EMBL:AF027732 EMBL:AC011622 IPI:IPI00545374 PIR:D96661
RefSeq:NP_001185302.1 RefSeq:NP_176552.1 RefSeq:NP_974080.1
UniGene:At.25024 ProteinModelPortal:Q9CAD0 SMR:Q9CAD0 IntAct:Q9CAD0
STRING:Q9CAD0 PRIDE:Q9CAD0 EnsemblPlants:AT1G63650.1
EnsemblPlants:AT1G63650.2 EnsemblPlants:AT1G63650.3 GeneID:842669
KEGG:ath:AT1G63650 GeneFarm:1894 TAIR:At1g63650 eggNOG:NOG320411
HOGENOM:HOG000237985 InParanoid:Q9CAD0 OMA:ERASANC PhylomeDB:Q9CAD0
ProtClustDB:CLSN2682588 Genevestigator:Q9CAD0 GermOnline:AT1G63650
GO:GO:0009957 Uniprot:Q9CAD0
Length = 596
Score = 182 (69.1 bits), Expect = 4.0e-13, P = 4.0e-13
Identities = 37/91 (40%), Positives = 55/91 (60%)
Query: 53 PSHAQDHVIAERKRREKLNQRFIALSALVPGLKKTDKASILGDSIKYLKQLQERVKALEE 112
P +H ++E+KRREKLN+RF+ L +++P + K DK SIL D+I+YL+ LQ+RV+ LE
Sbjct: 400 PEETGNHALSEKKRREKLNERFMTLRSIIPSISKIDKVSILDDTIEYLQDLQKRVQELES 459
Query: 113 QTSKKTVESMIIVKKSQMIYTDDETSPTDIN 143
E+ I + K + DDE N
Sbjct: 460 CRESADTETRITMMKRKK--PDDEEERASAN 488
>TAIR|locus:2079512 [details] [associations]
symbol:AT3G61950 "AT3G61950" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AL138642 HOGENOM:HOG000238962 EMBL:AF488600 EMBL:AK118527
EMBL:BT005298 EMBL:AJ630481 EMBL:AY568653 EMBL:AY088741
IPI:IPI00525313 IPI:IPI00529988 PIR:T47987 RefSeq:NP_567121.1
RefSeq:NP_850735.1 UniGene:At.22308 ProteinModelPortal:Q700E4
SMR:Q700E4 IntAct:Q700E4 EnsemblPlants:AT3G61950.1 GeneID:825368
KEGG:ath:AT3G61950 TAIR:At3g61950 eggNOG:NOG324736
InParanoid:Q700E4 OMA:RINHIAV PhylomeDB:Q700E4
ProtClustDB:CLSN2683564 Genevestigator:Q700E4 Uniprot:Q700E4
Length = 358
Score = 177 (67.4 bits), Expect = 4.6e-13, P = 4.6e-13
Identities = 49/191 (25%), Positives = 99/191 (51%)
Query: 37 KKKVQEPRRVSSVIRDPSHAQDHVIAERKRREKLNQRFIALSALVPG--LKKTDKASILG 94
K++ +P + + I + +H+ ER RR ++N+ +L AL+P +++ D+ASI+G
Sbjct: 160 KRRKTKPSKNNEEIEN--QRINHIAVERNRRRQMNEHINSLRALLPPSYIQRGDQASIVG 217
Query: 95 DSIKYLKQLQERVKALEEQTSKKTVESMIIVKKSQMIYTDDETSPTDINFDAQSNQYLPE 154
+I Y+K L++ +++LE Q + + +V+ + + S D+ + +P+
Sbjct: 218 GAINYVKVLEQIIQSLESQKRTQQQSNSEVVENALNHLSG--ISSNDLWTTLEDQTCIPK 275
Query: 155 IEVRVSDRDVLIRIHCEKNNNKGHLANILSEIENVHHLSVLSCNVLPFGNSTVDITVVAQ 214
IE V V +++ CEK +G L + +E + L+VL N+ +S+V + +
Sbjct: 276 IEATVIQNHVSLKVQCEKK--QGQLLKGIISLEKLK-LTVLHLNITTSSHSSVSYSFNLK 332
Query: 215 MDVESDVTVKD 225
M+ E D+ D
Sbjct: 333 MEDECDLESAD 343
>TAIR|locus:2130619 [details] [associations]
symbol:AT4G16430 "AT4G16430" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:Z97341 EMBL:AL161544
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238207
InterPro:IPR025610 Pfam:PF14215 EMBL:AF251688 EMBL:AF428368
EMBL:AY057626 EMBL:BT002301 IPI:IPI00546344 PIR:A71431
RefSeq:NP_193376.1 UniGene:At.33082 UniGene:At.4413
ProteinModelPortal:O23487 SMR:O23487 STRING:O23487 PaxDb:O23487
PRIDE:O23487 EnsemblPlants:AT4G16430.1 GeneID:827337
KEGG:ath:AT4G16430 TAIR:At4g16430 eggNOG:NOG246663
InParanoid:O23487 OMA:RSMSINF PhylomeDB:O23487
ProtClustDB:CLSN2685658 Genevestigator:O23487 Uniprot:O23487
Length = 467
Score = 174 (66.3 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 49/157 (31%), Positives = 81/157 (51%)
Query: 41 QEPR-RVSSVIRDPSHAQDHVIAERKRREKLNQRFIALSALVPGLKKTDKASILGDSIKY 99
Q+PR R A +HV AER+RREKLNQRF AL A+VP + K DKAS+L D+I Y
Sbjct: 302 QKPRKRGRKPANGREEALNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLADAITY 361
Query: 100 LKQLQERVKALEEQTSKKTVESMIIVKKSQMIYTDDETSPTDINFDAQSNQYLPEIEVRV 159
+ +Q++++ E T K+ I+K+ + ++ +P ++++ + + + + +
Sbjct: 362 ITDMQKKIRVYE--TEKQ------IMKRRE----SNQITPAEVDYQQRHDDAVVRLSCPL 409
Query: 160 SDRDVLIRIHCEKNNN-KGHLANILSEIENVHHLSVL 195
V I + N H +N+ E V H L
Sbjct: 410 ETHPVSKVIQTLRENEVMPHDSNVAITEEGVVHTFTL 446
>UNIPROTKB|Q53L62 [details] [associations]
symbol:LOC_Os11g15210 "Helix-loop-helix DNA-binding domain,
putative" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
EMBL:DP000010 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR025610
Pfam:PF14215 EMBL:AC145364 EnsemblPlants:LOC_Os11g15210.1
KEGG:dosa:Os11t0258700-00 Uniprot:Q53L62
Length = 458
Score = 172 (65.6 bits), Expect = 2.9e-12, P = 2.9e-12
Identities = 41/127 (32%), Positives = 72/127 (56%)
Query: 54 SHAQDHVIAERKRREKLNQRFIALSALVPGLKKTDKASILGDSIKYLKQLQERVKALEE- 112
S ++HV++ER+RREKL + F+ L ++VP + K DKASIL ++I YLK+L++RV+ LE
Sbjct: 240 SSIKNHVMSERRRREKLKEMFLILKSVVPSIHKVDKASILAETIAYLKELEKRVEELESS 299
Query: 113 -QTSKKTVESM------IIVKKSQMIYTDDETSPTDINFDAQSNQYLPEIEVRVSD-RDV 164
Q S + +E+ KK +P + D + + + V + D +++
Sbjct: 300 SQPSPRPMETTRRRCCKSTGKKVSAGARAKRKAPAPEDTDGERRHCVSNVNVTIMDNKEL 359
Query: 165 LIRIHCE 171
L+ + C+
Sbjct: 360 LLELQCQ 366
>UNIPROTKB|Q948Y2 [details] [associations]
symbol:Plw-OSB2 "R-type basic helix-loop-helix protein"
species:4530 "Oryza sativa" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR025610
Pfam:PF14215 HOGENOM:HOG000237985 EMBL:AB021080
ProteinModelPortal:Q948Y2 Gramene:Q948Y2 Genevestigator:Q948Y2
Uniprot:Q948Y2
Length = 451
Score = 171 (65.3 bits), Expect = 3.7e-12, P = 3.7e-12
Identities = 32/61 (52%), Positives = 48/61 (78%)
Query: 54 SHAQDHVIAERKRREKLNQRFIALSALVPGLKKTDKASILGDSIKYLKQLQERVKALEEQ 113
S+ + HV++ER+RREKLN+ F+ L +L+P ++K DKASIL ++I YLK L++RVK LE
Sbjct: 374 SNIKSHVMSERRRREKLNEMFLILKSLLPSVRKVDKASILAETITYLKVLEKRVKELESS 433
Query: 114 T 114
+
Sbjct: 434 S 434
>TAIR|locus:2035237 [details] [associations]
symbol:AT1G01260 "AT1G01260" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009694 "jasmonic acid metabolic process" evidence=RCA]
[GO:0009753 "response to jasmonic acid stimulus" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
eggNOG:NOG313259 HOGENOM:HOG000238207 InterPro:IPR025610
Pfam:PF14215 EMBL:AF251698 EMBL:AC023628 EMBL:AF488559
EMBL:AY079012 EMBL:AY120752 EMBL:BT004517 IPI:IPI00539052
PIR:H86142 RefSeq:NP_001077440.1 RefSeq:NP_001184883.1
RefSeq:NP_171634.1 UniGene:At.28312 ProteinModelPortal:Q9LNJ5
SMR:Q9LNJ5 IntAct:Q9LNJ5 EnsemblPlants:AT1G01260.1
EnsemblPlants:AT1G01260.2 EnsemblPlants:AT1G01260.3 GeneID:839545
KEGG:ath:AT1G01260 TAIR:At1g01260 InParanoid:Q9LNJ5 OMA:FPANYCY
PhylomeDB:Q9LNJ5 ProtClustDB:CLSN2682849 Genevestigator:Q9LNJ5
Uniprot:Q9LNJ5
Length = 590
Score = 172 (65.6 bits), Expect = 4.7e-12, P = 4.7e-12
Identities = 38/98 (38%), Positives = 58/98 (59%)
Query: 54 SHAQDHVIAERKRREKLNQRFIALSALVPGLKKTDKASILGDSIKYLKQLQERVKALEEQ 113
+ A +HV AER+RREKLNQRF AL ++VP + K DKAS+LGD++ Y+ +L ++K +E +
Sbjct: 429 AEALNHVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAVSYINELHAKLKVMEAE 488
Query: 114 TSKKTVESM--IIVKKSQMIYTDDETSPTDINFDAQSN 149
+ S I + + T E IN +S+
Sbjct: 489 RERLGYSSNPPISLDSDINVQTSGEDVTVRINCPLESH 526
>UNIPROTKB|Q657A4 [details] [associations]
symbol:P0022F12.30 "Regulatory protein B-Peru-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP002908 EMBL:AP003310 EnsemblPlants:LOC_Os01g39580.1
Uniprot:Q657A4
Length = 370
Score = 167 (63.8 bits), Expect = 6.4e-12, P = 6.4e-12
Identities = 31/55 (56%), Positives = 45/55 (81%)
Query: 57 QDHVIAERKRREKLNQRFIALSALVPGLKKTDKASILGDSIKYLKQLQERVKALE 111
++HV++ER+RREKLN+ F+ L +LVP + K DKASIL ++I YLK+L+ RV+ LE
Sbjct: 187 KNHVMSERRRREKLNEMFLILKSLVPSIDKVDKASILSETIAYLKELERRVQELE 241
>UNIPROTKB|Q8H8E4 [details] [associations]
symbol:OJ1006F06.1 "Putative bHLH transcription protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000029066 EMBL:AC099399 ProteinModelPortal:Q8H8E4
STRING:Q8H8E4 Gramene:Q8H8E4 Uniprot:Q8H8E4
Length = 430
Score = 168 (64.2 bits), Expect = 7.0e-12, P = 7.0e-12
Identities = 55/170 (32%), Positives = 89/170 (52%)
Query: 59 HVIAERKRREKLNQRFIALSALVPGLKKTDKASILGDSIKYLKQLQERVKALEEQTSKKT 118
+++AER+RR++LN R L ++VP + K D+ SILGD+I Y+K+L ER+K LEE+ T
Sbjct: 183 NLMAERRRRKRLNDRLSMLRSIVPKISKMDRTSILGDTIDYVKELTERIKTLEEEIGV-T 241
Query: 119 VESMIIVKKSQMIYTDDETSPTDINFDAQSNQYLPEIEVRVSDRDVLIRIHCEKNNNKGH 178
E + ++ T ++S + N N ++E R S + I I C N G
Sbjct: 242 PEEL------DLLNTMKDSSSGNNNEMLVRNSTKFDVENRGSG-NTRIEICCPAN--PGV 292
Query: 179 LANILSEIENVHHLSVLSCNVLPFGNSTVDITVVAQMDVESDVTVKDLVK 228
L + +S +E V L + C V F + + + + Q D + V D +K
Sbjct: 293 LLSTVSALE-VLGLEIEQCVVSCFSDFGMQASCL-QEDGKRQVVSTDEIK 340
>TAIR|locus:504954829 [details] [associations]
symbol:GL3 "AT5G41315" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS;NAS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0010091 "trichome branching" evidence=IMP]
[GO:0001708 "cell fate specification" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0009957 "epidermal cell fate
specification" evidence=IMP] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR025610 Pfam:PF14215
GO:GO:0010091 HSSP:P61244 EMBL:AB006707 eggNOG:NOG320411
HOGENOM:HOG000237985 ProtClustDB:CLSN2682588 GO:GO:0009957
EMBL:AF246291 IPI:IPI00543830 RefSeq:NP_680372.1 UniGene:At.27204
ProteinModelPortal:Q9FN69 SMR:Q9FN69 IntAct:Q9FN69 STRING:Q9FN69
EnsemblPlants:AT5G41315.1 GeneID:834133 KEGG:ath:AT5G41315
TAIR:At5g41315 InParanoid:Q9FN69 OMA:ERTSANC PhylomeDB:Q9FN69
Genevestigator:Q9FN69 Uniprot:Q9FN69
Length = 637
Score = 167 (63.8 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 33/73 (45%), Positives = 51/73 (69%)
Query: 58 DHVIAERKRREKLNQRFIALSALVPGLKKTDKASILGDSIKYLKQLQERVKALE---EQT 114
+H + E+KRREKLN+RF+ L ++P + K DK SIL D+I+YL++L+ RV+ LE E T
Sbjct: 441 NHAVLEKKRREKLNERFMTLRKIIPSINKIDKVSILDDTIEYLQELERRVQELESCREST 500
Query: 115 SKKTVESMIIVKK 127
+T +M + +K
Sbjct: 501 DTETRGTMTMKRK 513
>TAIR|locus:2155503 [details] [associations]
symbol:ALC "AT5G67110" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;ISS;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0010047 "fruit dehiscence" evidence=IMP]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0010047 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB020742 EMBL:BT028946 EMBL:AF488605 IPI:IPI00537617
IPI:IPI00846166 IPI:IPI00846501 RefSeq:NP_001078810.1
RefSeq:NP_001078811.1 RefSeq:NP_201512.1 UniGene:At.28825
HSSP:P36956 ProteinModelPortal:Q9FHA2 SMR:Q9FHA2 IntAct:Q9FHA2
STRING:Q9FHA2 EnsemblPlants:AT5G67110.1 GeneID:836846
KEGG:ath:AT5G67110 TAIR:At5g67110 eggNOG:NOG329583
HOGENOM:HOG000033902 InParanoid:Q9FHA2 OMA:HTRINET PhylomeDB:Q9FHA2
ProtClustDB:CLSN2686902 Genevestigator:Q9FHA2 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 Uniprot:Q9FHA2
Length = 210
Score = 151 (58.2 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 33/79 (41%), Positives = 54/79 (68%)
Query: 32 DQFCSKKKVQEPRRVSSVIRDPSHAQDHVIAERKRREKLNQRFIALSALVPGLKKTDKAS 91
D++ + K ++ +S+ R+ AQ H ++E+KRR K+N++ AL L+P KTDKAS
Sbjct: 72 DKYAFEHKRSGAKQRNSLKRNID-AQFHNLSEKKRRSKINEKMKALQKLIPNSNKTDKAS 130
Query: 92 ILGDSIKYLKQLQERVKAL 110
+L ++I+YLKQLQ +V+ L
Sbjct: 131 MLDEAIEYLKQLQLQVQTL 149
>UNIPROTKB|Q2R3F6 [details] [associations]
symbol:Os11g0523700 "Helix-loop-helix DNA-binding domain
containing protein, expressed" species:39947 "Oryza sativa Japonica
Group" [GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0003677 EMBL:DP000010 EMBL:AP008217 GO:GO:0050826
GO:GO:0010440 Gene3D:4.10.280.10 SUPFAM:SSF47459
RefSeq:NP_001067987.2 UniGene:Os.56356
EnsemblPlants:LOC_Os11g32100.1 GeneID:4350609 KEGG:osa:4350609
OMA:DGKDSNA Uniprot:Q2R3F6
Length = 524
Score = 158 (60.7 bits), Expect = 4.9e-10, P = 4.9e-10
Identities = 52/161 (32%), Positives = 84/161 (52%)
Query: 59 HVIAERKRREKLNQRFIALSALVPGLKKTDKASILGDSIKYLKQLQERVKALE-EQTSKK 117
+++AER+RR+KLN R L ++VP + K D+ASILGD+I+YLK+L +++ L+ E S
Sbjct: 337 NLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKELLQKINDLQNELESSP 396
Query: 118 TVESMIIVKKSQMIYTDD-ETSPTDINFD-------AQSNQYLPEIEVRVSD-RDVLIRI 168
S+ S T T P+ I + + + Q P +EVR+ + R V I +
Sbjct: 397 ATSSLPPTPTSFHPLTPTLPTLPSRIKEEICPSALPSPTGQQ-PRVEVRLREGRAVNIHM 455
Query: 169 HCEKNNNKGHLANILSEIENVHHLSVLSCNVLPFGNSTVDI 209
C + G L + + +E + L V + F T+DI
Sbjct: 456 FCARR--PGLLLSAMRAVEGLG-LDVQQAVISCFNGFTLDI 493
>TAIR|locus:2093746 [details] [associations]
symbol:FMA "AT3G24140" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0010052
"guard cell differentiation" evidence=IMP] [GO:0045597 "positive
regulation of cell differentiation" evidence=IMP] [GO:0045893
"positive regulation of transcription, DNA-dependent"
evidence=RCA;IDA] [GO:0051782 "negative regulation of cell
division" evidence=IMP] [GO:0000165 "MAPK cascade" evidence=RCA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=RCA] [GO:0006612 "protein targeting to membrane"
evidence=RCA] [GO:0009617 "response to bacterium" evidence=RCA]
[GO:0009862 "systemic acquired resistance, salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0009867 "jasmonic acid
mediated signaling pathway" evidence=RCA] [GO:0009965 "leaf
morphogenesis" evidence=RCA] [GO:0010103 "stomatal complex
morphogenesis" evidence=RCA] [GO:0010310 "regulation of hydrogen
peroxide metabolic process" evidence=RCA] [GO:0010363 "regulation
of plant-type hypersensitive response" evidence=RCA] [GO:0030154
"cell differentiation" evidence=RCA] [GO:0031348 "negative
regulation of defense response" evidence=RCA] [GO:0035304
"regulation of protein dephosphorylation" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0045893
GO:GO:0003677 GO:GO:0045597 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238962
GO:GO:0051782 EMBL:AB028621 GO:GO:0010052 EMBL:AK221324
EMBL:BT028961 EMBL:AF488624 IPI:IPI00523995 RefSeq:NP_189056.2
UniGene:At.37586 ProteinModelPortal:Q56YJ8 SMR:Q56YJ8 IntAct:Q56YJ8
STRING:Q56YJ8 PRIDE:Q56YJ8 EnsemblPlants:AT3G24140.1 GeneID:822000
KEGG:ath:AT3G24140 TAIR:At3g24140 eggNOG:NOG326823
InParanoid:Q56YJ8 OMA:KRRRLYG PhylomeDB:Q56YJ8
ProtClustDB:CLSN2680105 Genevestigator:Q56YJ8 Uniprot:Q56YJ8
Length = 414
Score = 125 (49.1 bits), Expect = 7.1e-10, Sum P(2) = 7.1e-10
Identities = 27/88 (30%), Positives = 55/88 (62%)
Query: 36 SKKKVQEPR---RVSSVIRD-PSHAQDHVIAERKRREKLNQRFIALSALVPG--LKKTDK 89
+KK+V+ R R S + S H+ ER RR+++N+ L +L+PG +++ D+
Sbjct: 172 TKKEVKSKRKRARTSKTSEEVESQRMTHIAVERNRRKQMNEHLRVLRSLMPGSYVQRGDQ 231
Query: 90 ASILGDSIKYLKQLQERVKALEEQTSKK 117
ASI+G +I+++++L++ ++ LE Q ++
Sbjct: 232 ASIIGGAIEFVRELEQLLQCLESQKRRR 259
Score = 77 (32.2 bits), Expect = 7.1e-10, Sum P(2) = 7.1e-10
Identities = 21/86 (24%), Positives = 45/86 (52%)
Query: 146 AQSNQYLPEIEVRVSDRDVLIRIHCEKNNNKGHLANILSEIENVHHLSVLSCNVLPFGNS 205
A++ L ++EV++ D +I+I + G L ++ +E++H LS+L N+
Sbjct: 309 AENKSCLADVEVKLLGFDAMIKILSRRR--PGQLIKTIAALEDLH-LSILHTNITTM-EQ 364
Query: 206 TVDITVVAQMDVESDVTVKDLVKNLQ 231
TV + ++ E+ T +D+ ++Q
Sbjct: 365 TVLYSFNVKITSETRFTAEDIASSIQ 390
>TAIR|locus:2039445 [details] [associations]
symbol:AMS "AT2G16910" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009555 "pollen development" evidence=IMP] [GO:0048658 "tapetal
layer development" evidence=IMP] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0009555 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR025610
Pfam:PF14215 EMBL:AC005167 EMBL:AF488565 IPI:IPI00529182 PIR:G84545
RefSeq:NP_179283.2 UniGene:At.48482 UniGene:At.70395
ProteinModelPortal:Q9ZVX2 SMR:Q9ZVX2 STRING:Q9ZVX2 PRIDE:Q9ZVX2
EnsemblPlants:AT2G16910.1 GeneID:816194 KEGG:ath:AT2G16910
TAIR:At2g16910 eggNOG:NOG313389 HOGENOM:HOG000033929
InParanoid:Q9ZVX2 OMA:PRTKSCE PhylomeDB:Q9ZVX2
ProtClustDB:CLSN2690121 ArrayExpress:Q9ZVX2 Genevestigator:Q9ZVX2
GO:GO:0048658 Uniprot:Q9ZVX2
Length = 571
Score = 155 (59.6 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 29/60 (48%), Positives = 45/60 (75%)
Query: 59 HVIAERKRREKLNQRFIALSALVPGLKKTDKASILGDSIKYLKQLQERVKALEEQTSKKT 118
+++AER+RR+KLN R AL +LVP + K D+ASILGD+I Y+K+LQ K L+++ + +
Sbjct: 315 NLMAERRRRKKLNDRLYALRSLVPRITKLDRASILGDAINYVKELQNEAKELQDELEENS 374
>UNIPROTKB|Q6ZBI4 [details] [associations]
symbol:P0623F08.11 "Phaseolin G-box binding protein
PG1-like" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 HSSP:P22415 EMBL:AP003914 EMBL:AP004632
EnsemblPlants:LOC_Os08g43070.1 KEGG:dosa:Os08t0543700-00
OMA:PVISHVE Uniprot:Q6ZBI4
Length = 263
Score = 150 (57.9 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 29/58 (50%), Positives = 42/58 (72%)
Query: 59 HVIAERKRREKLNQRFIALSALVPGLKKTDKASILGDSIKYLKQLQERVKALEEQTSK 116
HV AER+RREKLN+RF L A VP + + DKAS+L D++ Y+ +L+ RV+ LE + +
Sbjct: 95 HVEAERQRREKLNRRFCELRAAVPTVSRMDKASLLADAVDYIAELRRRVERLEAEARR 152
>UNIPROTKB|Q948F6 [details] [associations]
symbol:OSJNBa0049O12.18 "Putative SPATULA" species:4530
"Oryza sativa" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P36956
PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 EMBL:AC069158
ProteinModelPortal:Q948F6 Gramene:Q948F6 Genevestigator:Q948F6
Uniprot:Q948F6
Length = 298
Score = 143 (55.4 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 27/55 (49%), Positives = 43/55 (78%)
Query: 56 AQDHVIAERKRREKLNQRFIALSALVPGLKKTDKASILGDSIKYLKQLQERVKAL 110
A+ H ++E++RR ++N++ AL +L+P KTDKAS+L D+I+YLKQLQ +V+ L
Sbjct: 34 AEVHNLSEKRRRSRINEKMKALQSLIPNSSKTDKASMLDDAIEYLKQLQLQVQML 88
Score = 41 (19.5 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 6/23 (26%), Positives = 16/23 (69%)
Query: 113 QTSKKTVESMIIVKKSQMIYTDD 135
++S+ ++S+ + ++MIY D+
Sbjct: 171 ESSRSNLQSLRFTEPAEMIYPDE 193
>UNIPROTKB|Q5SMX4 [details] [associations]
symbol:P0498B01.36 "cDNA clone:J033115I17, full insert
sequence" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP008207 EMBL:AP003417 EMBL:HQ858870
EMBL:AK102964 RefSeq:NP_001042293.1 UniGene:Os.32770 GeneID:4327325
KEGG:osa:4327325 eggNOG:NOG253236 OMA:GNNGFMC
ProtClustDB:CLSN2691168 Uniprot:Q5SMX4
Length = 439
Score = 153 (58.9 bits), Expect = 3.4e-09, P = 3.4e-09
Identities = 46/135 (34%), Positives = 70/135 (51%)
Query: 30 YLDQFCSKKKVQEPRRVSSVIRDPSHAQ-DHVIAERKRREKLNQRFIALSALVPGLKKTD 88
Y Q+ ++ S+ PS Q H+I+ERKRREKLN F+AL A++P K D
Sbjct: 225 YNRQYYYQQAAAAAASASAAEAPPSGNQLQHMISERKRREKLNDSFLALKAVLPPGSKKD 284
Query: 89 KASILGDSIKYLKQLQERVKALEEQTSKKTVESMIIVKKSQMIYTDD-ETS--PTDINFD 145
K SIL + +Y+K L+ ++ LEE+ + +E+ + + + D ET+ P D
Sbjct: 285 KTSILIRAREYVKSLESKLSELEEKN--RELEARLASRPAAAAKNDKGETAAAPAPEAGD 342
Query: 146 AQSNQYLPEIEVRVS 160
+ L EIEV S
Sbjct: 343 ETKRKDLVEIEVTTS 357
>TAIR|locus:2009537 [details] [associations]
symbol:AT1G22490 "AT1G22490" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009536
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC006551
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238962
EMBL:AY088234 EMBL:AF488622 IPI:IPI00545534 PIR:B86358
RefSeq:NP_564171.1 UniGene:At.19247 ProteinModelPortal:Q9SK91
SMR:Q9SK91 EnsemblPlants:AT1G22490.1 GeneID:838855
KEGG:ath:AT1G22490 TAIR:At1g22490 eggNOG:NOG281753
InParanoid:Q8L9T3 OMA:ESHANIK PhylomeDB:Q9SK91
ProtClustDB:CLSN2679534 Genevestigator:Q9SK91 Uniprot:Q9SK91
Length = 304
Score = 150 (57.9 bits), Expect = 4.2e-09, P = 4.2e-09
Identities = 49/209 (23%), Positives = 106/209 (50%)
Query: 37 KKKVQEPRRVSSVIRDPSHAQDHVIAERKRREKLNQRFIALSALVPG--LKKTDKASILG 94
++K + R + + H+ ER RR+++N+ L +L+P ++ D+ASI+G
Sbjct: 95 RRKRRRTRNCKNKEEIENQRMTHIAVERNRRKQMNEYLAVLRSLMPSSYAQRGDQASIVG 154
Query: 95 DSIKYLKQLQERVKALEEQTSKKTVESMIIVKKSQMI--YTDDETSP---TDINFDAQSN 149
+I Y+K+L+ ++++E + ++ S ++ +TD + P T + D +
Sbjct: 155 GAINYVKELEHILQSMEPKRTRTHDPKGDKTSTSSLVGPFTDFFSFPQYSTKSSSDVPES 214
Query: 150 QYLP-EIEVRVSDRDVLIRIHCEKNNNKGHLANILSEIENVHHLSVLSCNVLPFGNSTVD 208
P EIEV V++ I+I +K + L +++ ++++ L++L NV NS +
Sbjct: 215 SSSPAEIEVTVAESHANIKIMTKKKPRQ--LLKLITSLQSLR-LTLLHLNVTTLHNSIL- 270
Query: 209 ITVVAQMDVESDV-TVKDLVKNLQPALRK 236
++ +++ S + TV D+ L +R+
Sbjct: 271 YSISVRVEEGSQLNTVDDIATALNQTIRR 299
>TAIR|locus:2123954 [details] [associations]
symbol:AT4G29930 "AT4G29930" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AL161575 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AK117730 EMBL:BT005869 EMBL:AY568654
EMBL:AJ630482 EMBL:AK176201 EMBL:AK176276 EMBL:AK176674
EMBL:AK222212 EMBL:AK228201 EMBL:AF488569 IPI:IPI00516806
IPI:IPI00544272 IPI:IPI00546879 IPI:IPI00892082
RefSeq:NP_001031752.1 RefSeq:NP_001078471.1 RefSeq:NP_001119080.1
RefSeq:NP_194722.2 UniGene:At.44068 ProteinModelPortal:Q700E3
SMR:Q700E3 IntAct:Q700E3 EnsemblPlants:AT4G29930.3 GeneID:829116
KEGG:ath:AT4G29930 TAIR:At4g29930 eggNOG:NOG294060
HOGENOM:HOG000006429 InParanoid:Q8GYC3 OMA:PIENIGE PhylomeDB:Q700E3
ProtClustDB:CLSN2680169 Genevestigator:Q700E3 Uniprot:Q700E3
Length = 263
Score = 147 (56.8 bits), Expect = 7.0e-09, P = 7.0e-09
Identities = 28/66 (42%), Positives = 46/66 (69%)
Query: 59 HVIAERKRREKLNQRFIALSALVPGLKKTDKASILGDSIKYLKQLQERVKALEEQTSKKT 118
+V++ER RR+KLNQR AL ++VP + K DKAS++ DSI Y+++L ++ K LE + +
Sbjct: 55 NVVSERNRRQKLNQRLFALRSVVPNISKLDKASVIKDSIDYMQELIDQEKTLEAEIRELE 114
Query: 119 VESMII 124
S ++
Sbjct: 115 SRSTLL 120
>TAIR|locus:2154197 [details] [associations]
symbol:SPCH "AT5G53210" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010374 "stomatal complex development" evidence=IMP]
[GO:0010103 "stomatal complex morphogenesis" evidence=RCA]
[GO:0042127 "regulation of cell proliferation" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AB013388 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238962 GO:GO:0010374 EMBL:DQ868373
EMBL:AJ630498 EMBL:AY568670 IPI:IPI00520239 RefSeq:NP_200133.2
UniGene:At.50528 ProteinModelPortal:Q700C7 SMR:Q700C7 STRING:Q700C7
EnsemblPlants:AT5G53210.1 GeneID:835402 KEGG:ath:AT5G53210
TAIR:At5g53210 eggNOG:NOG325833 InParanoid:Q700C7 OMA:NHESSVI
PhylomeDB:Q700C7 ProtClustDB:CLSN2719098 Genevestigator:Q700C7
Uniprot:Q700C7
Length = 364
Score = 125 (49.1 bits), Expect = 7.9e-09, Sum P(2) = 7.9e-09
Identities = 24/75 (32%), Positives = 47/75 (62%)
Query: 51 RDPSHAQDHVIAERKRREKLNQRFIALSALVPG--LKKTDKASILGDSIKYLKQLQERVK 108
+D HV ER RR+++N+ L +L+P +K+ D+ASI+G ++Y+ +LQ+ ++
Sbjct: 96 QDGQQKMSHVTVERNRRKQMNEHLTVLRSLMPCFYVKRGDQASIIGGVVEYISELQQVLQ 155
Query: 109 ALEEQTSKKTVESMI 123
+LE + +KT ++
Sbjct: 156 SLEAKKQRKTYAEVL 170
Score = 65 (27.9 bits), Expect = 7.9e-09, Sum P(2) = 7.9e-09
Identities = 22/90 (24%), Positives = 48/90 (53%)
Query: 146 AQSNQYLPEIEVRVSDRDVLIRIHCEKNNNKGHLANILSEIENVHHLSVLSCNVLPFGNS 205
A S L ++EV+ S +VL++ K G + I++ +E++ L +L N+ +
Sbjct: 279 ANSKSALADVEVKFSGANVLLKTVSHKI--PGQVMKIIAALEDLA-LEILQVNI-----N 330
Query: 206 TVDITVV----AQMDVESDVTVKDLVKNLQ 231
TVD T++ ++ +E ++ ++L + +Q
Sbjct: 331 TVDETMLNSFTIKIGIECQLSAEELAQQIQ 360
>TAIR|locus:2155725 [details] [associations]
symbol:bHLH093 "AT5G65640" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0007275
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB026639 HOGENOM:HOG000029066 EMBL:AF488621 EMBL:BT025665
EMBL:AK229018 EMBL:AY085134 IPI:IPI00533579 IPI:IPI00785991
RefSeq:NP_001078801.1 RefSeq:NP_569014.1 UniGene:At.28897
ProteinModelPortal:Q9LSL1 SMR:Q9LSL1 EnsemblPlants:AT5G65640.1
GeneID:836690 KEGG:ath:AT5G65640 TAIR:At5g65640 eggNOG:NOG245311
InParanoid:Q9LSL1 OMA:PLMESDQ PhylomeDB:Q9LSL1
ProtClustDB:CLSN2686406 Genevestigator:Q9LSL1 Uniprot:Q9LSL1
Length = 351
Score = 148 (57.2 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 42/172 (24%), Positives = 88/172 (51%)
Query: 59 HVIAERKRREKLNQRFIALSALVPGLKKTDKASILGDSIKYLKQLQERVKALEEQTSKKT 118
+++AER+RR++LN R L ++VP + K D+ SILGD+I Y+K+L +++ L+++ +
Sbjct: 179 NLMAERRRRKRLNDRLSMLRSIVPKISKMDRTSILGDAIDYMKELLDKINKLQDEEQELG 238
Query: 119 VESMIIVKKSQMIYTDDETSPTDINFDAQSNQYLPEIEVRVSDRDVLIRIHCEKNNNKGH 178
+ K ++ D + D+N + + P+ E+ D D + I C G
Sbjct: 239 NSNNSHHSK---LFGDLK----DLNANEPLVRNSPKFEIDRRDEDTRVDICCSPK--PGL 289
Query: 179 LANILSEIENVHHLSVLSCNVLPFGNSTVDITVVAQMDVESDVTVKDLVKNL 230
L + ++ +E + L + C + F + ++ + + +T +D+ + L
Sbjct: 290 LLSTVNTLETLG-LEIEQCVISCFSDFSLQASCSEGAEQRDFITSEDIKQAL 340
>UNIPROTKB|Q5SMX2 [details] [associations]
symbol:P0498B01.25 "Basic helix-loop-helix protein-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP003417 ProteinModelPortal:Q5SMX2
EnsemblPlants:LOC_Os01g09930.1 Gramene:Q5SMX2 HOGENOM:HOG000237612
OMA:IRAREHI Uniprot:Q5SMX2
Length = 412
Score = 148 (57.2 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 40/106 (37%), Positives = 62/106 (58%)
Query: 53 PSHAQ-DHVIAERKRREKLNQRFIALSALVPGLKKTDKASILGDSIKYLKQLQERVKALE 111
PS Q H+I+ERKRREKLN F+AL A++P K DKASIL + +++K L+ ++ LE
Sbjct: 178 PSDNQLQHMISERKRREKLNDSFVALKAVLPTGSKKDKASILIRAREHIKSLESKLSELE 237
Query: 112 EQTSKKTVESMIIVKKSQMIYTDDETSPTDINFDAQSNQYLPEIEV 157
E+ + +E+ + + + ET+ + D + L EIEV
Sbjct: 238 EKN--RELEARLASRPAAK-NDKGETAAAEAG-DETKREDLVEIEV 279
>TAIR|locus:2126876 [details] [associations]
symbol:UNE10 "AT4G00050" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009567
"double fertilization forming a zygote and endosperm" evidence=IMP]
[GO:0009506 "plasmodesma" evidence=IDA] InterPro:IPR011598
InterPro:IPR024097 InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0009506 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:AL161471 HSSP:P22415 GO:GO:0009567
EMBL:AF069299 EMBL:AF488561 EMBL:AK117229 EMBL:BT025971
IPI:IPI00517893 PIR:T01333 RefSeq:NP_191916.3 UniGene:At.44779
ProteinModelPortal:Q8GZ38 SMR:Q8GZ38 IntAct:Q8GZ38
EnsemblPlants:AT4G00050.1 GeneID:828175 KEGG:ath:AT4G00050
TAIR:At4g00050 eggNOG:NOG239145 HOGENOM:HOG000084918
InParanoid:Q8GZ38 OMA:MMSRMNM PhylomeDB:Q8GZ38
ProtClustDB:CLSN2690671 Genevestigator:Q8GZ38 Uniprot:Q8GZ38
Length = 399
Score = 147 (56.8 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 36/85 (42%), Positives = 49/85 (57%)
Query: 47 SSVIRDPSHAQD-HVIAERKRREKLNQRFIALSALVPGLKKTDKASILGDSIKYLKQLQE 105
SSV S A H +ERKRR+K+NQR L LVP KTDKAS+L + I+YLKQLQ
Sbjct: 205 SSVSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQA 264
Query: 106 RVKALEEQTSKKTVESMIIVKKSQM 130
+V + + M + ++ Q+
Sbjct: 265 QVSMMSRMNMPSMMLPMAMQQQQQL 289
>TAIR|locus:2082400 [details] [associations]
symbol:MUTE "AT3G06120" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0010374
"stomatal complex development" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005739
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000238962 EMBL:AC018907 GO:GO:0010374 EMBL:AF488580
EMBL:DQ863645 EMBL:DQ864972 EMBL:DQ446639 EMBL:DQ653068
IPI:IPI00548354 RefSeq:NP_187263.1 UniGene:At.40565
ProteinModelPortal:Q9M8K6 SMR:Q9M8K6 STRING:Q9M8K6
EnsemblPlants:AT3G06120.1 GeneID:819785 KEGG:ath:AT3G06120
TAIR:At3g06120 eggNOG:NOG271176 InParanoid:Q9M8K6 OMA:SHIAVER
PhylomeDB:Q9M8K6 ProtClustDB:CLSN2684638 Genevestigator:Q9M8K6
Uniprot:Q9M8K6
Length = 202
Score = 138 (53.6 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 48/191 (25%), Positives = 94/191 (49%)
Query: 59 HVIAERKRREKLNQRFIALSALVPG--LKKTDKASILGDSIKYLKQLQERVKALEEQTSK 116
H+ ER RR ++N+ +L +L P +K+ D+ASI+G I+++K+LQ+ V+ LE + +
Sbjct: 3 HIAVERNRRRQMNEHLKSLRSLTPCFYIKRGDQASIIGGVIEFIKELQQLVQVLESKKRR 62
Query: 117 KTVE-------------SMIIVKKSQMIYTDDETSPTDINFD---AQSNQYLPEIEVRVS 160
KT+ S + +++ ++ E T F A N +E ++S
Sbjct: 63 KTLNRPSFPYDHQTIEPSSLGAATTRVPFSRIENVMTTSTFKEVGACCNSPHANVEAKIS 122
Query: 161 DRDVLIRIHCEKNNNKGHLANILSEIENVHHLSVLSCNVLPFGNSTVDITVVAQMDVESD 220
+V++R+ + G L I+S +E + VL N+ TV V ++ +E
Sbjct: 123 GSNVVLRVVSRRI--VGQLVKIISVLEKLS-FQVLHLNISSM-EETVLYFFVVKIGLECH 178
Query: 221 VTVKDLVKNLQ 231
+++++L +Q
Sbjct: 179 LSLEELTLEVQ 189
>TAIR|locus:2046198 [details] [associations]
symbol:FRU "AT2G28160" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010039 "response to iron ion" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0034756 "regulation of iron ion
transport" evidence=IMP] [GO:0071281 "cellular response to iron
ion" evidence=IEP] [GO:0071369 "cellular response to ethylene
stimulus" evidence=IEP] [GO:0071732 "cellular response to nitric
oxide" evidence=IEP] [GO:0000041 "transition metal ion transport"
evidence=RCA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0071281 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
EMBL:AC005851 GO:GO:0071732 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0071369 EMBL:AF488570 EMBL:BT026446 IPI:IPI00547189
PIR:E84681 RefSeq:NP_850114.1 UniGene:At.43510
ProteinModelPortal:Q0V7X4 SMR:Q0V7X4 IntAct:Q0V7X4 STRING:Q0V7X4
PaxDb:Q0V7X4 PRIDE:Q0V7X4 EnsemblPlants:AT2G28160.1 GeneID:817362
KEGG:ath:AT2G28160 TAIR:At2g28160 eggNOG:NOG236355
HOGENOM:HOG000006047 InParanoid:Q0V7X4 OMA:NLKLWIT PhylomeDB:Q0V7X4
ProtClustDB:CLSN2690963 Genevestigator:Q0V7X4 GO:GO:0034756
Uniprot:Q0V7X4
Length = 318
Score = 145 (56.1 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 39/143 (27%), Positives = 77/143 (53%)
Query: 60 VIAERKRREKLNQRFIALSALVPGLKKTDKASILGDSIKYLKQLQERVKALEEQTSKKTV 119
+I+ER+RR ++ + AL +LVP + K DKASI+GD++ Y+++LQ + K L+ + +
Sbjct: 133 LISERRRRGRMKDKLYALRSLVPNITKMDKASIVGDAVLYVQELQSQAKKLKSDIAG--L 190
Query: 120 ESMIIVKKSQMIYTDD--ETSP-TDINFDAQSNQYLPEIEVRVSDRDVLIRIHCEKNNNK 176
E+ + + D +T P IN A S + + ++V ++ +R+ C N +
Sbjct: 191 EASLNSTGGYQEHAPDAQKTQPFRGINPPA-SKKIIQMDVIQVEEKGFYVRLVC--NKGE 247
Query: 177 GHLANILSEIENVHHLSVLSCNV 199
G ++ +E++ V + N+
Sbjct: 248 GVAPSLYKSLESLTSFQVQNSNL 270
>UNIPROTKB|Q5KQG3 [details] [associations]
symbol:OSJNBb0086G17.12 "Putative uncharacterized protein
OSJNBb0086G17.12" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238962 OMA:SHIAVER EMBL:AC144455
ProteinModelPortal:Q5KQG3 EnsemblPlants:LOC_Os05g51820.1
Gramene:Q5KQG3 Uniprot:Q5KQG3
Length = 227
Score = 114 (45.2 bits), Expect = 3.3e-08, Sum P(2) = 3.3e-08
Identities = 22/61 (36%), Positives = 39/61 (63%)
Query: 59 HVIAERKRREKLNQRFIALSALVPG--LKKTDKASILGDSIKYLKQLQERVKALEEQTSK 116
H+ ER RR ++N L +L P +K+ D+ASI+G +I ++K+LQ +++LE Q +
Sbjct: 3 HIAVERNRRRQMNDHLKVLRSLTPAFYIKRGDQASIIGGAIDFIKELQTLLQSLEAQKKR 62
Query: 117 K 117
+
Sbjct: 63 R 63
Score = 64 (27.6 bits), Expect = 3.3e-08, Sum P(2) = 3.3e-08
Identities = 20/78 (25%), Positives = 42/78 (53%)
Query: 149 NQYLPEIEVRVSDRDVLIRIHCEKNNNKGHLANILSEIENVHHLSVLSCNVLPFGNSTVD 208
N + ++E R+S +VL+R + + I++ +E++H L VL N+ + TV
Sbjct: 134 NSPMADVEARISGANVLLRTL----SRRAPPVRIIALLESLH-LEVLHLNITTM-DDTVL 187
Query: 209 ITVVAQMDVESDVTVKDL 226
+ V ++ ++ ++V DL
Sbjct: 188 YSFVLKIGLDCHLSVDDL 205
>UNIPROTKB|Q7FA23 [details] [associations]
symbol:OSJNBa0058K23.6 "Os04g0618600 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P36956
PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 EMBL:AP008210
EMBL:CM000141 EMBL:AL662970 RefSeq:NP_001053893.1 UniGene:Os.4548
EnsemblPlants:LOC_Os04g52770.1 GeneID:4337015 KEGG:osa:4337015
eggNOG:NOG275283 OMA:RSAEFHN ProtClustDB:CLSN2695118 Uniprot:Q7FA23
Length = 181
Score = 131 (51.2 bits), Expect = 3.6e-08, P = 3.6e-08
Identities = 29/69 (42%), Positives = 45/69 (65%)
Query: 42 EPRRVSSVIRDPSHAQDHVIAERKRREKLNQRFIALSALVPGLKKTDKASILGDSIKYLK 101
E RR + R S A+ H +ER+RR+++N++ AL L+P KTDK S+L ++I YLK
Sbjct: 2 EARRPTPTRRSRS-AEFHNFSERRRRDRINEKLKALQELLPNCTKTDKVSMLDEAIDYLK 60
Query: 102 QLQERVKAL 110
LQ +++ L
Sbjct: 61 SLQLQLQML 69
>TAIR|locus:2044387 [details] [associations]
symbol:AT2G46810 "AT2G46810" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AC005310 HOGENOM:HOG000238962 ProtClustDB:CLSN2683564
EMBL:AF488602 IPI:IPI00528766 PIR:T02682 RefSeq:NP_182204.1
UniGene:At.36451 ProteinModelPortal:O81037 SMR:O81037
EnsemblPlants:AT2G46810.1 GeneID:819294 KEGG:ath:AT2G46810
TAIR:At2g46810 eggNOG:NOG256546 InParanoid:O81037 OMA:KPWELEN
PhylomeDB:O81037 Genevestigator:O81037 Uniprot:O81037
Length = 371
Score = 145 (56.1 bits), Expect = 3.7e-08, P = 3.7e-08
Identities = 43/192 (22%), Positives = 98/192 (51%)
Query: 37 KKKVQEPRRVSSVIRDPSHAQDHVIAERKRREKLNQRFIALSALVPG--LKKTDKASILG 94
K+K + + ++ S H+ ER RR ++N +L +++P +++ D+ASI+G
Sbjct: 173 KRKRRRTKPTKNIEEIESQRMTHIAVERNRRRQMNVHLNSLRSIIPSSYIQRGDQASIVG 232
Query: 95 DSIKYLKQLQERVKALEEQT-SKKTVESMIIVKKSQMIYTDDETSPTDINFDAQSNQYLP 153
+I ++K L++++++LE Q S+++ ++ + + + N + QS++
Sbjct: 233 GAIDFVKILEQQLQSLEAQKRSQQSDDNKEQIPEDNSLRNISSNKLRASNKEEQSSKL-- 290
Query: 154 EIEVRVSDRDVLIRIHCEKNNNKGHLANILSEIENVHHLSVLSCNVLPFGNSTVDITVVA 213
+IE V + V ++I C + +G L + +E + +VL N+ N++V +
Sbjct: 291 KIEATVIESHVNLKIQCTRK--QGQLLRSIILLEKLR-FTVLHLNITSPTNTSVSYSFNL 347
Query: 214 QMDVESDVTVKD 225
+M+ E ++ D
Sbjct: 348 KMEDECNLGSAD 359
>UNIPROTKB|Q5VRS4 [details] [associations]
symbol:OSJNBa0015I14.14 "Basic helix-loop-helix protein
SPATULA-like" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
InterPro:IPR024097 InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0006355 EMBL:CM000143
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:AP002536 KEGG:dosa:Os06t0164400-01
Uniprot:Q5VRS4
Length = 315
Score = 143 (55.4 bits), Expect = 4.7e-08, P = 4.7e-08
Identities = 31/68 (45%), Positives = 48/68 (70%)
Query: 43 PRRVSSVIRDPSHAQDHVIAERKRREKLNQRFIALSALVPGLKKTDKASILGDSIKYLKQ 102
PR S R + A+ H ++E++RR K+N++ AL +L+P KTDKAS+L ++I+YLKQ
Sbjct: 93 PRGGSGSKRSRA-AEVHNLSEKRRRSKINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQ 151
Query: 103 LQERVKAL 110
LQ +V+ L
Sbjct: 152 LQLQVQML 159
>UNIPROTKB|Q2QMN2 [details] [associations]
symbol:LOC_Os12g40590 "Helix-loop-helix DNA-binding domain
containing protein, expressed" species:39947 "Oryza sativa Japonica
Group" [GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
InterPro:IPR024097 InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:DP000011 EMBL:CM000149 eggNOG:NOG272270
KEGG:dosa:Os12t0597800-01 Uniprot:Q2QMN2
Length = 265
Score = 141 (54.7 bits), Expect = 5.0e-08, P = 5.0e-08
Identities = 27/73 (36%), Positives = 48/73 (65%)
Query: 39 KVQEPRRVS-SVIRDPSHAQDHVIAERKRREKLNQRFIALSALVPGLKKTDKASILGDSI 97
+ +E RRV R+P +A+ H + E++RR ++N++F L LVPG K ++S L +I
Sbjct: 136 RTEERRRVKHKARRNPGYAETHGLTEKRRRSRINEKFKMLQRLVPGCDKCSQSSTLDRTI 195
Query: 98 KYLKQLQERVKAL 110
Y+K LQ++++A+
Sbjct: 196 HYMKSLQQQLQAM 208
>TAIR|locus:2129710 [details] [associations]
symbol:bHLH104 "AT4G14410" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
EMBL:AL161538 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:Z97336 HOGENOM:HOG000238732
ProtClustDB:CLSN2689429 EMBL:AF488628 EMBL:AY102106 EMBL:AY133565
EMBL:AY088053 IPI:IPI00527516 IPI:IPI00532570 PIR:B71406
RefSeq:NP_567431.1 RefSeq:NP_849383.1 UniGene:At.4272
ProteinModelPortal:Q8L467 SMR:Q8L467 EnsemblPlants:AT4G14410.1
GeneID:827086 KEGG:ath:AT4G14410 TAIR:At4g14410 eggNOG:NOG307178
InParanoid:Q8L467 OMA:TKACRER PhylomeDB:Q8L467
Genevestigator:Q8L467 Uniprot:Q8L467
Length = 283
Score = 141 (54.7 bits), Expect = 6.2e-08, P = 6.2e-08
Identities = 47/137 (34%), Positives = 75/137 (54%)
Query: 30 YLDQFCSKKKVQEPRRVSSVIRDPSHAQDHVIAERKRREKLNQRFIALSALV-PG-LKKT 87
+LD CS+K+ R S R ER RREKLN+RF+ LS+++ PG KT
Sbjct: 113 HLDDDCSRKRA----RTGSCSRGGG---TKACRERLRREKLNERFMDLSSVLEPGRTPKT 165
Query: 88 DKASILGDSIKYLKQLQERVKALEEQTSKKTVESMIIVK--KSQM------IYTDDETSP 139
DK +IL D+I+ L QL++ LEE T++K +E + +K K+++ + D E +
Sbjct: 166 DKPAILDDAIRILNQLRDEALKLEE-TNQKLLEEIKSLKAEKNELREEKLVLKADKEKTE 224
Query: 140 TDI-NFDAQSNQYLPEI 155
+ + A S+ ++P I
Sbjct: 225 QQLKSMTAPSSGFIPHI 241
>UNIPROTKB|Q336V8 [details] [associations]
symbol:Os10g0544200 "Os10g0544200 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0003677 EMBL:DP000086 EMBL:AP008216
EMBL:CM000147 Gene3D:4.10.280.10 SUPFAM:SSF47459 eggNOG:NOG245311
EMBL:AK063669 RefSeq:NP_001065200.1 UniGene:Os.46563
EnsemblPlants:LOC_Os10g39750.1 GeneID:4349271 KEGG:osa:4349271
ProtClustDB:CLSN2693493 Uniprot:Q336V8
Length = 380
Score = 143 (55.4 bits), Expect = 7.2e-08, P = 7.2e-08
Identities = 34/111 (30%), Positives = 64/111 (57%)
Query: 53 PSHAQDHVIAERKRREKLNQRFIALSALVPGLKKTDKASILGDSIKYLKQLQERVKALEE 112
P +++AER+RR++LN R L ++VP + K D+ SILGD+I Y+K+L +R+K L+
Sbjct: 191 PGAPSKNLMAERRRRKRLNDRLSMLRSVVPRISKMDRTSILGDTIGYVKELMDRIKNLQV 250
Query: 113 Q-----TSKKTVESMIIVKKSQMIYTDDETSPTDINFDAQSNQYLPEIEVR 158
+ +S + E++ ++K + + +S + S ++ E+E R
Sbjct: 251 EAATGDSSSSSTENLSMLKLNTLKPPPSSSSGEETPLIRNSTRF--EVERR 299
>TAIR|locus:2090847 [details] [associations]
symbol:ICE1 "AT3G26744" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA;TAS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0009409 "response to cold" evidence=IEP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=RCA;IDA] [GO:0050826 "response to freezing"
evidence=RCA;IMP] [GO:0010440 "stomatal lineage progression"
evidence=IMP] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0009410 "response to xenobiotic
stimulus" evidence=RCA] [GO:0009640 "photomorphogenesis"
evidence=RCA] [GO:0009793 "embryo development ending in seed
dormancy" evidence=RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0009909 "regulation of flower development"
evidence=RCA] [GO:0009933 "meristem structural organization"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0010182 "sugar mediated signaling pathway" evidence=RCA]
[GO:0010228 "vegetative to reproductive phase transition of
meristem" evidence=RCA] [GO:0010388 "cullin deneddylation"
evidence=RCA] [GO:0016567 "protein ubiquitination" evidence=RCA]
[GO:0016571 "histone methylation" evidence=RCA] [GO:0016579
"protein deubiquitination" evidence=RCA] [GO:0019915 "lipid
storage" evidence=RCA] [GO:0043687 "post-translational protein
modification" evidence=RCA] [GO:0048522 "positive regulation of
cellular process" evidence=RCA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0045893 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0050826 EMBL:AB016889 GO:GO:0010440
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AB026648 EMBL:AY195621
EMBL:AY079016 EMBL:BT020379 EMBL:AK228443 IPI:IPI00518051
IPI:IPI00656676 RefSeq:NP_001030774.1 RefSeq:NP_001030776.2
RefSeq:NP_189309.2 UniGene:At.25302 ProteinModelPortal:Q9LSE2
SMR:Q9LSE2 STRING:Q9LSE2 PaxDb:Q9LSE2 PRIDE:Q9LSE2
EnsemblPlants:AT3G26744.1 EnsemblPlants:AT3G26744.2
EnsemblPlants:AT3G26744.4 GeneID:822287 KEGG:ath:AT3G26744
TAIR:At3g26744 eggNOG:NOG236974 HOGENOM:HOG000085036
InParanoid:Q9LSE2 OMA:NSESSGM PhylomeDB:Q9LSE2
ProtClustDB:CLSN2690572 Genevestigator:Q9LSE2 GermOnline:AT3G26744
Uniprot:Q9LSE2
Length = 494
Score = 144 (55.7 bits), Expect = 8.3e-08, P = 8.3e-08
Identities = 50/178 (28%), Positives = 85/178 (47%)
Query: 59 HVIAERKRREKLNQRFIALSALVPGLKKTDKASILGDSIKYLKQLQERVKALEEQTSKKT 118
+++AER+RR+KLN R L ++VP + K D+ASILGD+I YLK+L +R+ L +
Sbjct: 308 NLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELESTP 367
Query: 119 VESMIIVKKS-QMIYTDDETSPTDINFD-AQSNQYLPE-----IEVRVSD-RDVLIRIHC 170
S+ S + +T + + S+ P+ +EVR+ + R V I + C
Sbjct: 368 PGSLPPTSSSFHPLTPTPQTLSCRVKEELCPSSLPSPKGQQARVEVRLREGRAVNIHMFC 427
Query: 171 EKNNNKGHLANILSEIENVHHLSVLSCNVLPFGNSTVDITVVAQMDVESDVTVKDLVK 228
+ G L + ++N+ L V + F +D+ Q E + D +K
Sbjct: 428 GRR--PGLLLATMKALDNLG-LDVQQAVISCFNGFALDVFRAEQCQ-EGQEILPDQIK 481
>UNIPROTKB|Q69IU0 [details] [associations]
symbol:P0498F03.15 "Putative MYC-related DNA binding
protein RD22BP1" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP008215 EMBL:AP006525 EMBL:AP007254
RefSeq:NP_001063693.1 UniGene:Os.86289
EnsemblPlants:LOC_Os09g34330.1 GeneID:4347601 KEGG:osa:4347601
OMA:GPTVSHV ProtClustDB:CLSN2725166 Uniprot:Q69IU0
Length = 284
Score = 140 (54.3 bits), Expect = 8.8e-08, P = 8.8e-08
Identities = 29/53 (54%), Positives = 38/53 (71%)
Query: 59 HVIAERKRREKLNQRFIALSALVPGLKKTDKASILGDSIKYLKQLQERVKALE 111
HV AER+RREKLN+RF L A VP + + DKAS+L D+ Y+ +L+ RV LE
Sbjct: 112 HVEAERQRREKLNRRFCDLRAAVPTVSRMDKASLLADAAAYIAELRARVARLE 164
>TAIR|locus:2061634 [details] [associations]
symbol:PIL5 "phytochrome interacting factor 3-like 5"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS;IDA;TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0015995 "chlorophyll
biosynthetic process" evidence=IMP] [GO:0010187 "negative
regulation of seed germination" evidence=IGI;IMP] [GO:0010313
"phytochrome binding" evidence=IDA] [GO:0009959 "negative
gravitropism" evidence=IMP;TAS] [GO:0010029 "regulation of seed
germination" evidence=TAS] [GO:0010099 "regulation of
photomorphogenesis" evidence=TAS] [GO:0003677 "DNA binding"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0009740 "gibberellic acid mediated
signaling pathway" evidence=RCA;IMP] [GO:0010100 "negative
regulation of photomorphogenesis" evidence=IMP] [GO:0010161 "red
light signaling pathway" evidence=IDA] [GO:0006783 "heme
biosynthetic process" evidence=IMP] [GO:0042802 "identical protein
binding" evidence=IPI] [GO:0009686 "gibberellin biosynthetic
process" evidence=RCA] [GO:0009845 "seed germination" evidence=RCA]
[GO:0048608 "reproductive structure development" evidence=RCA]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0010187 GO:GO:0006783 Gene3D:4.10.280.10
SUPFAM:SSF47459 PANTHER:PTHR10014 PANTHER:PTHR10014:SF30
GO:GO:0010161 EMBL:AC006081 HSSP:P61244 HOGENOM:HOG000240264
GO:GO:0015995 GO:GO:0010100 GO:GO:0009740 GO:GO:0009959
EMBL:AF488560 EMBL:AB103113 EMBL:AK228820 EMBL:BT029775
IPI:IPI00527244 IPI:IPI00537020 PIR:A84586 RefSeq:NP_001189559.1
RefSeq:NP_179608.2 RefSeq:NP_849996.1 UniGene:At.43003
UniGene:At.69322 ProteinModelPortal:Q8GZM7 SMR:Q8GZM7 IntAct:Q8GZM7
STRING:Q8GZM7 PRIDE:Q8GZM7 EnsemblPlants:AT2G20180.2
EnsemblPlants:AT2G20180.3 GeneID:816538 KEGG:ath:AT2G20180
TAIR:At2g20180 eggNOG:NOG264707 InParanoid:Q8GZM7 OMA:QEDEMTS
PhylomeDB:Q8GZM7 ProtClustDB:CLSN2690808 Genevestigator:Q8GZM7
GO:GO:0010313 Uniprot:Q8GZM7
Length = 478
Score = 143 (55.4 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 30/80 (37%), Positives = 53/80 (66%)
Query: 32 DQFCSKKKVQEPRRVSSVIRDPSHAQD-HVIAERKRREKLNQRFIALSALVPGLKKTDKA 90
D+ S+ + + RVS+ S A + H ++ERKRR+++N+R AL L+P K+DKA
Sbjct: 261 DETESRSEETKQARVSTTSTKRSRAAEVHNLSERKRRDRINERMKALQELIPRCNKSDKA 320
Query: 91 SILGDSIKYLKQLQERVKAL 110
S+L ++I+Y+K LQ +++ +
Sbjct: 321 SMLDEAIEYMKSLQLQIQMM 340
>TAIR|locus:2164605 [details] [associations]
symbol:AT5G56960 "AT5G56960" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010200 "response to chitin" evidence=IEP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0010200 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB024035 IPI:IPI00545938 RefSeq:NP_200506.1 UniGene:At.55597
ProteinModelPortal:Q9LTS4 SMR:Q9LTS4 EnsemblPlants:AT5G56960.1
GeneID:835798 KEGG:ath:AT5G56960 TAIR:At5g56960 eggNOG:NOG254434
HOGENOM:HOG000095216 InParanoid:Q9LTS4 OMA:RENATTH PhylomeDB:Q9LTS4
ProtClustDB:CLSN2687375 Genevestigator:Q9LTS4 Uniprot:Q9LTS4
Length = 466
Score = 142 (55.0 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 48/171 (28%), Positives = 88/171 (51%)
Query: 53 PSHAQ-DHVIAERKRREKLNQRFIALSALVPGLKKTDKASILGDSIKYLKQLQERVKALE 111
PS Q H+I+ERKRREKLN+ F AL +L+P K DKAS+L + + L LQ + L
Sbjct: 283 PSATQLQHMISERKRREKLNESFQALRSLLPPGTKKDKASVLSIAREQLSSLQGEISKLL 342
Query: 112 EQTSKKTVESMIIVKKS-QMIYTDDETSPTDINFDAQSNQYLPEIEVRVSDRDVLIRIHC 170
E+ + VE+ + ++ + +E I +S +++RV R +IR+
Sbjct: 343 ERN--REVEAKLAGEREIENDLRPEERFNVRIRHIPESTSRERTLDLRVVLRGDIIRV-- 398
Query: 171 EKNNNKGHLANILSEIENVHHLSVLSCNVLPF-GNSTVDITVVAQMDVESD 220
++ L L +I NV +S+ + + G++++ + + ++ +E +
Sbjct: 399 --DDLMIRLLEFLKQINNVSLVSIEARTLARAEGDTSIVLVISLRLKIEGE 447
>TAIR|locus:2020003 [details] [associations]
symbol:AT1G10610 "AT1G10610" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC009398 Gene3D:4.10.280.10
SUPFAM:SSF47459 InterPro:IPR025610 Pfam:PF14215 EMBL:AC007067
HOGENOM:HOG000033929 EMBL:AK229375 EMBL:AF488620 IPI:IPI00786098
PIR:F86239 RefSeq:NP_172531.2 UniGene:At.42172
ProteinModelPortal:Q0WNR2 SMR:Q0WNR2 EnsemblPlants:AT1G10610.1
GeneID:837604 KEGG:ath:AT1G10610 TAIR:At1g10610 eggNOG:NOG318339
OMA:GIHGEVV PhylomeDB:Q0WNR2 ProtClustDB:CLSN2920225
Genevestigator:Q0WNR2 Uniprot:Q0WNR2
Length = 441
Score = 141 (54.7 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 43/161 (26%), Positives = 79/161 (49%)
Query: 62 AERKRREKLNQRFIALSALVPGLKKTDKASILGDSIKYLKQLQ-ERVKALEEQTSKKTVE 120
+ERKRRE++NQ L A+VP + K +K I D++ Y+ +L E+ K +E +E
Sbjct: 268 SERKRRERINQAMYGLRAVVPKITKLNKIGIFSDAVDYINELLVEKQKLEDELKGINEME 327
Query: 121 SMIIVKKSQMIYTDDETSPTDINFDAQSNQYLPEIEVR-VSDRDVLIRIHCEKNNNKGHL 179
I + Q D E + + + +IEV +RD LIR+ +++ G
Sbjct: 328 CKEIAAEEQSAIADPEAERVSSKSNKRVKKNEVKIEVHETGERDFLIRV-VQEHKQDGFK 386
Query: 180 ANILSEIENVHHLSVLSCNVLPFGNSTVDITVVAQMDVESD 220
L E ++ L ++ N + +D+TV+ ++V+++
Sbjct: 387 R--LIEAVDLCELEIIDVNF-----TRLDLTVMTVLNVKAN 420
>UNIPROTKB|Q8GRJ1 [details] [associations]
symbol:OJ1343_B12.103 "Transcription factor BHLH9-like
protein" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 HSSP:P61244 EMBL:AP003824 EMBL:AP004010
Uniprot:Q8GRJ1
Length = 417
Score = 140 (54.3 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 29/68 (42%), Positives = 46/68 (67%)
Query: 43 PRRVSSVIRDPSHAQDHVIAERKRREKLNQRFIALSALVPGLKKTDKASILGDSIKYLKQ 102
P + + R A+ H ++ER+RR+++N++ AL LVP KTDKASIL ++I+YLK
Sbjct: 217 PSKRPAAKRRTRAAEVHNLSERRRRDRINEKLRALQELVPHCNKTDKASILDEAIEYLKS 276
Query: 103 LQERVKAL 110
LQ +V+ +
Sbjct: 277 LQMQVQIM 284
>TAIR|locus:2115080 [details] [associations]
symbol:SPT "AT4G36930" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0009908 "flower
development" evidence=NAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;TAS]
[GO:0009409 "response to cold" evidence=IMP] [GO:0010114 "response
to red light" evidence=IMP] [GO:0010187 "negative regulation of
seed germination" evidence=IMP] [GO:0010154 "fruit development"
evidence=IMP] [GO:0048440 "carpel development" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0007623 "circadian
rhythm" evidence=IEP] InterPro:IPR011598 InterPro:IPR024097
InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0007623 GO:GO:0009409 GO:GO:0003700 GO:GO:0006351
GO:GO:0010114 GO:GO:0010187 GO:GO:0048440 GO:GO:0010154
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:Z99707 EMBL:AL161590 EMBL:AF319540
EMBL:AK229267 EMBL:BT026462 IPI:IPI00541204 PIR:B85436
RefSeq:NP_568010.1 UniGene:At.4639 ProteinModelPortal:Q9FUA4
SMR:Q9FUA4 IntAct:Q9FUA4 STRING:Q9FUA4 EnsemblPlants:AT4G36930.1
GeneID:829847 KEGG:ath:AT4G36930 TAIR:At4g36930 eggNOG:NOG276771
HOGENOM:HOG000090429 InParanoid:Q9FUA4 OMA:NAPEMIN PhylomeDB:Q9FUA4
ProtClustDB:CLSN2917674 Genevestigator:Q9FUA4 GermOnline:AT4G36930
Uniprot:Q9FUA4
Length = 373
Score = 139 (54.0 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 26/55 (47%), Positives = 43/55 (78%)
Query: 56 AQDHVIAERKRREKLNQRFIALSALVPGLKKTDKASILGDSIKYLKQLQERVKAL 110
A+ H ++E++RR ++N++ AL +L+P KTDKAS+L ++I+YLKQLQ +V+ L
Sbjct: 199 AEVHNLSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQML 253
>TAIR|locus:2142419 [details] [associations]
symbol:AT5G10570 "AT5G10570" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AL353995 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AF488594 IPI:IPI00529696 PIR:T49982
RefSeq:NP_196619.1 UniGene:At.32362 ProteinModelPortal:Q9LXA9
SMR:Q9LXA9 EnsemblPlants:AT5G10570.1 GeneID:830922
KEGG:ath:AT5G10570 TAIR:At5g10570 eggNOG:NOG310833
HOGENOM:HOG000029066 InParanoid:Q9LXA9 OMA:SSAFDYP PhylomeDB:Q9LXA9
ProtClustDB:CLSN2914918 Genevestigator:Q9LXA9 Uniprot:Q9LXA9
Length = 315
Score = 137 (53.3 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 30/99 (30%), Positives = 57/99 (57%)
Query: 59 HVIAERKRREKLNQRFIALSALVPGLKKTDKASILGDSIKYLKQLQERVKALEEQTSKKT 118
+++AER+RR++LN R L ++VP + K D+ SILGD+I Y+K+L +++ L+E +
Sbjct: 152 NLMAERRRRKRLNDRLSLLRSIVPKITKMDRTSILGDAIDYMKELLDKINKLQEDEQELG 211
Query: 119 VESMIIVKKSQMIYTDDETSPTDINFDAQSNQYLPEIEV 157
S + S +I T++ + F+ + I++
Sbjct: 212 SNSHL----STLI-TNESMVRNSLKFEVDQREVNTHIDI 245
>TAIR|locus:2077680 [details] [associations]
symbol:PIL6 "AT3G59060" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0009585 "red,
far-red light phototransduction" evidence=IMP] [GO:0009693
"ethylene biosynthetic process" evidence=IMP] [GO:0010600
"regulation of auxin biosynthetic process" evidence=IDA]
[GO:0010928 "regulation of auxin mediated signaling pathway"
evidence=IDA] [GO:0000096 "sulfur amino acid metabolic process"
evidence=RCA] [GO:0006546 "glycine catabolic process" evidence=RCA]
[GO:0006636 "unsaturated fatty acid biosynthetic process"
evidence=RCA] [GO:0006733 "oxidoreduction coenzyme metabolic
process" evidence=RCA] [GO:0006766 "vitamin metabolic process"
evidence=RCA] [GO:0007623 "circadian rhythm" evidence=RCA]
[GO:0008652 "cellular amino acid biosynthetic process"
evidence=RCA] [GO:0009072 "aromatic amino acid family metabolic
process" evidence=RCA] [GO:0009073 "aromatic amino acid family
biosynthetic process" evidence=RCA] [GO:0009106 "lipoate metabolic
process" evidence=RCA] [GO:0009108 "coenzyme biosynthetic process"
evidence=RCA] [GO:0009117 "nucleotide metabolic process"
evidence=RCA] [GO:0009630 "gravitropism" evidence=RCA] [GO:0009684
"indoleacetic acid biosynthetic process" evidence=RCA] [GO:0009695
"jasmonic acid biosynthetic process" evidence=RCA] [GO:0009965
"leaf morphogenesis" evidence=RCA] [GO:0010017 "red or far-red
light signaling pathway" evidence=RCA] [GO:0015995 "chlorophyll
biosynthetic process" evidence=RCA] [GO:0019288 "isopentenyl
diphosphate biosynthetic process, mevalonate-independent pathway"
evidence=RCA] [GO:0019344 "cysteine biosynthetic process"
evidence=RCA] [GO:0019748 "secondary metabolic process"
evidence=RCA] [GO:0019761 "glucosinolate biosynthetic process"
evidence=RCA] [GO:0030003 "cellular cation homeostasis"
evidence=RCA] [GO:0030154 "cell differentiation" evidence=RCA]
[GO:0044272 "sulfur compound biosynthetic process" evidence=RCA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=RCA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0009693 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
EMBL:AL163527 GO:GO:0009585 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000240264 HSSP:P22415 GO:GO:0010928
ProtClustDB:CLSN2680212 GO:GO:0010600 EMBL:AF488598 EMBL:AB103112
EMBL:AY081271 EMBL:BT000049 IPI:IPI00541791 IPI:IPI00543835
IPI:IPI00890365 PIR:T47788 RefSeq:NP_001030889.1
RefSeq:NP_001030890.1 RefSeq:NP_191465.3 RefSeq:NP_851021.1
UniGene:At.43437 UniGene:At.67329 ProteinModelPortal:Q84LH8
SMR:Q84LH8 IntAct:Q84LH8 STRING:Q84LH8 EnsemblPlants:AT3G59060.2
EnsemblPlants:AT3G59060.3 EnsemblPlants:AT3G59060.4 GeneID:825075
KEGG:ath:AT3G59060 TAIR:At3g59060 eggNOG:NOG259206
InParanoid:Q84LH8 OMA:SHCGSNQ PhylomeDB:Q84LH8
Genevestigator:Q84LH8 Uniprot:Q84LH8
Length = 444
Score = 139 (54.0 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 40/126 (31%), Positives = 64/126 (50%)
Query: 32 DQFCSKKKVQEPRRVSSVIRDPSHAQDHVIAERKRREKLNQRFIALSALVPGLKKTDKAS 91
DQ K Q R S R + A+ H ++ER+RR+++N+R AL L+P +TDKAS
Sbjct: 238 DQTMGNKSSQ---RSGSTRRSRA-AEVHNLSERRRRDRINERMKALQELIPHCSRTDKAS 293
Query: 92 ILGDSIKYLKQLQERVKALEEQTSKKTVESMIIVKKSQMIYTDDETSPTDINFDAQSNQY 151
IL ++I YLK LQ +++ + + + S M++ ++SP QS
Sbjct: 294 ILDEAIDYLKSLQMQLQVMWMGSGMAAAAA---AAASPMMFPGVQSSPYINQMAMQSQMQ 350
Query: 152 LPEIEV 157
L + V
Sbjct: 351 LSQFPV 356
>TAIR|locus:2040287 [details] [associations]
symbol:BHLH100 "basic helix-loop-helix protein 100"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0010106 "cellular response to iron
ion starvation" evidence=IEP] [GO:0009414 "response to water
deprivation" evidence=IEP] [GO:0055072 "iron ion homeostasis"
evidence=IGI] InterPro:IPR011598 InterPro:IPR015660 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 PANTHER:PTHR13935 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0009414
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AC005662 GO:GO:0055072 HSSP:P61244 EMBL:AY074635 EMBL:AF488626
IPI:IPI00522524 IPI:IPI00548751 PIR:E84839 RefSeq:NP_181657.1
RefSeq:NP_850349.1 UniGene:At.37027 ProteinModelPortal:Q9ZVB5
SMR:Q9ZVB5 EnsemblPlants:AT2G41240.1 GeneID:818723
KEGG:ath:AT2G41240 TAIR:At2g41240 eggNOG:NOG256140
HOGENOM:HOG000238662 InParanoid:Q9ZVB5 OMA:HNASERE PhylomeDB:Q9ZVB5
ProtClustDB:CLSN2683761 Genevestigator:Q9ZVB5 Uniprot:Q9ZVB5
Length = 242
Score = 133 (51.9 bits), Expect = 4.1e-07, P = 4.1e-07
Identities = 38/133 (28%), Positives = 72/133 (54%)
Query: 58 DHVIAERKRREKLNQRFIALSALVPGLKKTDKASI---LGDSIKYLKQLQERVKALEEQT 114
+H +ER+RR+K+N F +L + +P +T K S+ + ++KY+ +LQE+VK L +
Sbjct: 65 NHNASERERRKKINTMFSSLRSCLPPTNQTKKLSVSATVSQALKYIPELQEQVKKLMK-- 122
Query: 115 SKKTVESMIIVKKSQMIYTDDETSPTDINFDAQSNQYLPEIEVRVSDRDVLIRIHCEKNN 174
KK S I + ++YTD + S ++ + ++ R+S+ +V+++I
Sbjct: 123 -KKEELSFQISGQRDLVYTD-QNSKSEEGVTSYASTVS---STRLSETEVMVQIS-SLQT 176
Query: 175 NKGHLANILSEIE 187
K N+LS +E
Sbjct: 177 EKCSFGNVLSGVE 189
>UNIPROTKB|Q6YUS3 [details] [associations]
symbol:OSJNBb0088N06.15 "BHLH protein-like" species:39947
"Oryza sativa Japonica Group" [GO:0003677 "DNA binding"
evidence=IMP] [GO:0005634 "nucleus" evidence=IC] [GO:0048653
"anther development" evidence=IMP] [GO:0048654 "anther
morphogenesis" evidence=IMP] [GO:0048657 "tapetal cell
differentiation" evidence=IMP] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 eggNOG:NOG313389
HOGENOM:HOG000033929 OMA:PRTKSCE EMBL:AP008208 EMBL:CM000139
GO:GO:0048657 EMBL:AP004078 EMBL:AP005851 RefSeq:NP_001045710.1
UniGene:Os.50000 EnsemblPlants:LOC_Os02g02820.1 GeneID:4328113
KEGG:osa:4328113 ProtClustDB:CLSN2692391 Uniprot:Q6YUS3
Length = 552
Score = 139 (54.0 bits), Expect = 4.5e-07, P = 4.5e-07
Identities = 28/52 (53%), Positives = 39/52 (75%)
Query: 62 AERKRREKLNQRFIALSALVPGLKKTDKASILGDSIKYLKQLQERVKALEEQ 113
AERKRR+KLN L +LVP + K D+ASILGD+I Y+ LQ++VK L+++
Sbjct: 289 AERKRRKKLNGHLYKLRSLVPNITKMDRASILGDAIDYIVGLQKQVKELQDE 340
>UNIPROTKB|Q7X8R0 [details] [associations]
symbol:OSJNBa0083N12.3 "OSJNBa0083N12.3 protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP008210 EMBL:CM000141 eggNOG:NOG254981 EMBL:AL606683
RefSeq:NP_001053749.1 UniGene:Os.49995
EnsemblPlants:LOC_Os04g51070.1 GeneID:4336865 KEGG:osa:4336865
OMA:RASIVGD ProtClustDB:CLSN2695079 Uniprot:Q7X8R0
Length = 464
Score = 138 (53.6 bits), Expect = 4.5e-07, P = 4.5e-07
Identities = 47/147 (31%), Positives = 75/147 (51%)
Query: 63 ERKRREKLNQRFIALSALVPGLKKTDKASILGDSIKYLKQLQERVKALEEQTSKKTVES- 121
ER+RRE+LN +F L L P K D+ASI+GD+I+Y+ +L VK L+ +K +
Sbjct: 270 ERERREQLNVKFRTLRMLFPNPTKNDRASIVGDAIEYIDELNRTVKELKILVEQKRHGNN 329
Query: 122 -MIIVKKSQMIYTDDETSPTDINFDAQSNQ--------YLPE------IEVRVSDRDVLI 166
++K Q D E+S D Q NQ ++ ++VR+ D +V I
Sbjct: 330 RRKVLKLDQEAAADGESSSMRPVRDDQDNQLHGAIRSSWVQRRSKECHVDVRIVDDEVNI 389
Query: 167 RI-HCEKNNNKGHLANILSE--IENVH 190
++ +K N+ H A +L E +E +H
Sbjct: 390 KLTEKKKANSLLHAAKVLDEFQLELIH 416
>TAIR|locus:2141206 [details] [associations]
symbol:DYT1 "AT4G21330" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IMP;TAS]
[GO:0048658 "tapetal layer development" evidence=IMP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL161554
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 GO:GO:0048658 EMBL:EF637083 EMBL:AL031187
IPI:IPI00519007 PIR:T05175 RefSeq:NP_193864.1 UniGene:At.54456
ProteinModelPortal:O81900 SMR:O81900 EnsemblPlants:AT4G21330.1
GeneID:827883 KEGG:ath:AT4G21330 TAIR:At4g21330 eggNOG:NOG316303
HOGENOM:HOG000112300 InParanoid:O81900 OMA:MEEAPPE PhylomeDB:O81900
ProtClustDB:CLSN2685365 Genevestigator:O81900 Uniprot:O81900
Length = 207
Score = 130 (50.8 bits), Expect = 4.7e-07, P = 4.7e-07
Identities = 47/147 (31%), Positives = 79/147 (53%)
Query: 39 KVQEPRRVS---SVIR----DPSHAQDHVIAERKRREKLNQRFIALSALVPGLKKTDKAS 91
+ QEP R+S V + D + ++ AER+RREKL+ R +AL + VP + KAS
Sbjct: 6 RFQEPVRMSRRKQVTKEKEEDENFKSPNLEAERRRREKLHCRLMALRSHVPIVTNMTKAS 65
Query: 92 ILGDSIKYLKQLQERVKALEEQTSKKTVESMIIVKKSQ---MIYTDDETSPTDINFDAQS 148
I+ D+I Y+ +LQ VK L E T + E+ + + Q MI + ETS D+N + +
Sbjct: 66 IVEDAITYIGELQNNVKNLLE-TFHEMEEAPPEIDEEQTDPMIKPEVETS--DLNEEMKK 122
Query: 149 NQYLPEIEV-RVSDRDVLIRIHCEKNN 174
+++ ++ +R ++I EK +
Sbjct: 123 LGIEENVQLCKIGERKFWLKIITEKRD 149
>TAIR|locus:2127023 [details] [associations]
symbol:ATMYC1 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0048629 "trichome
patterning" evidence=IMP] [GO:0001708 "cell fate specification"
evidence=RCA] [GO:0009913 "epidermal cell differentiation"
evidence=RCA] [GO:0009957 "epidermal cell fate specification"
evidence=RCA] [GO:0003677 "DNA binding" evidence=ISS]
InterPro:IPR011598 PROSITE:PS50888 SMART:SM00353 EMBL:CP002687
GO:GO:0003700 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR025610
Pfam:PF14215 GO:GO:0048629 IPI:IPI00938615 RefSeq:NP_001154194.1
UniGene:At.28313 ProteinModelPortal:F4JHC4 SMR:F4JHC4
EnsemblPlants:AT4G00480.2 GeneID:827965 KEGG:ath:AT4G00480
OMA:FWSLSTR Uniprot:F4JHC4
Length = 580
Score = 139 (54.0 bits), Expect = 4.8e-07, P = 4.8e-07
Identities = 37/138 (26%), Positives = 75/138 (54%)
Query: 67 REKLNQRFIALSALVPGLKKTDKASILGDSIKYLKQLQERVKALEE--------QTSKKT 118
R K N++F L +VP + + DK SIL ++IKYL++L+ RV+ LE + +KT
Sbjct: 346 RRKENEKFSVLRTMVPTVNEVDKESILNNTIKYLQELEARVEELESCMGSVNFVERQRKT 405
Query: 119 VESM---IIVKKSQMIYTDDETSPTDINFDAQSNQYLPE---IEVRVSDRDVLIRIHCEK 172
E++ ++++++ Y DD T D + + + + + V++ + +V+I + C
Sbjct: 406 TENLNDSVLIEETSGNY-DDSTKIDDNSGETEQVTVFRDKTHLRVKLKETEVVIEVRCSY 464
Query: 173 NNNKGHLANILSEIENVH 190
+ +A+I+ + N+H
Sbjct: 465 RDYI--VADIMETLSNLH 480
>TAIR|locus:2053733 [details] [associations]
symbol:PIF4 "AT2G43010" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0010017 "red or far-red light
signaling pathway" evidence=RCA;IMP] [GO:0010161 "red light
signaling pathway" evidence=IGI] [GO:0009704 "de-etiolation"
evidence=IMP] [GO:0010600 "regulation of auxin biosynthetic
process" evidence=IDA] [GO:0010928 "regulation of auxin mediated
signaling pathway" evidence=IDA] [GO:0000165 "MAPK cascade"
evidence=RCA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0006612 "protein targeting to
membrane" evidence=RCA] [GO:0007623 "circadian rhythm"
evidence=RCA] [GO:0009617 "response to bacterium" evidence=RCA]
[GO:0009630 "gravitropism" evidence=RCA] [GO:0009862 "systemic
acquired resistance, salicylic acid mediated signaling pathway"
evidence=RCA] [GO:0009867 "jasmonic acid mediated signaling
pathway" evidence=RCA] [GO:0010310 "regulation of hydrogen peroxide
metabolic process" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA] [GO:0030003
"cellular cation homeostasis" evidence=RCA] [GO:0031348 "negative
regulation of defense response" evidence=RCA] [GO:0035304
"regulation of protein dephosphorylation" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0009585 Gene3D:4.10.280.10
SUPFAM:SSF47459 GO:GO:0010161 GO:GO:0009704 GO:GO:0010928
EMBL:AC006224 EMBL:AJ440755 EMBL:AF251694 EMBL:AY142625
EMBL:AF360221 EMBL:EF193514 EMBL:EF193515 EMBL:EF193516
EMBL:EF193517 EMBL:EF193518 EMBL:EF193519 EMBL:EF193520
EMBL:EF193521 EMBL:EF193522 EMBL:EF193523 EMBL:EF193524
EMBL:EF193525 EMBL:EF193526 EMBL:EF193527 IPI:IPI00520232
IPI:IPI00534557 PIR:H84860 RefSeq:NP_565991.2 UniGene:At.19015
ProteinModelPortal:Q8W2F3 SMR:Q8W2F3 IntAct:Q8W2F3 STRING:Q8W2F3
EnsemblPlants:AT2G43010.1 GeneID:818903 KEGG:ath:AT2G43010
TAIR:At2g43010 eggNOG:NOG244119 InParanoid:Q8W2F3 KO:K16189
OMA:IRETEME PhylomeDB:Q8W2F3 ProtClustDB:CLSN2680212
Genevestigator:Q8W2F3 GermOnline:AT2G43010 GO:GO:0010600
Uniprot:Q8W2F3
Length = 430
Score = 136 (52.9 bits), Expect = 7.1e-07, P = 7.1e-07
Identities = 26/55 (47%), Positives = 41/55 (74%)
Query: 56 AQDHVIAERKRREKLNQRFIALSALVPGLKKTDKASILGDSIKYLKQLQERVKAL 110
A+ H ++ER+RR+++N+R AL L+P KTDKASIL ++I YLK LQ +++ +
Sbjct: 259 AEVHNLSERRRRDRINERMKALQELIPHCSKTDKASILDEAIDYLKSLQLQLQVM 313
>TAIR|locus:2207061 [details] [associations]
symbol:AT1G72210 "AT1G72210" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005739 GO:GO:0005634 GO:GO:0009536
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AC067754 HOGENOM:HOG000238962 eggNOG:NOG281753
ProtClustDB:CLSN2679534 EMBL:AJ459771 EMBL:BT003871 EMBL:BT006086
IPI:IPI00538709 PIR:F96745 RefSeq:NP_177366.1 UniGene:At.35130
ProteinModelPortal:Q9C7T4 SMR:Q9C7T4 EnsemblPlants:AT1G72210.1
GeneID:843553 KEGG:ath:AT1G72210 TAIR:At1g72210 InParanoid:Q9C7T4
OMA:PQDPFSY PhylomeDB:Q9C7T4 Genevestigator:Q9C7T4 Uniprot:Q9C7T4
Length = 320
Score = 133 (51.9 bits), Expect = 9.4e-07, P = 9.4e-07
Identities = 47/190 (24%), Positives = 97/190 (51%)
Query: 59 HVIAERKRREKLNQRFIALSALVPGL--KKTDKASILGDSIKYLKQLQERVKALE----- 111
H+ ER RR+++N+ L +L+P ++ D+ASI+G +I YLK+L+ ++++E
Sbjct: 127 HIAVERNRRKQMNEYLAVLRSLMPPYYAQRGDQASIVGGAINYLKELEHHLQSMEPPVKT 186
Query: 112 --EQTSKKTVESMIIVKKSQMIYTDDETSPTDIN--FDAQSNQYLPEIEVRVSDRDVLIR 167
E T ++ S ++D P N A + + + EIEV + + ++
Sbjct: 187 ATEDTGAGHDQTKTTSASSSGPFSDFFAFPQYSNRPTSAAAAEGMAEIEVTMVESHASLK 246
Query: 168 IHCEKNNNKGHLANILSEIENVHHLSVLSCNVLPFGNSTVDITVVAQMDVESDV-TVKDL 226
I +K + L ++S I+++ L++L NV +S + ++ +++ S + TV+D+
Sbjct: 247 ILAKKRPRQ--LLKLVSSIQSLR-LTLLHLNVTTRDDSVL-YSISVKVEEGSQLNTVEDI 302
Query: 227 VKNLQPALRK 236
+ LR+
Sbjct: 303 AAAVNQILRR 312
>TAIR|locus:2012345 [details] [associations]
symbol:PIF3 "AT1G09530" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0009639 "response to red or far red
light" evidence=IMP] [GO:0010017 "red or far-red light signaling
pathway" evidence=RCA;IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0042802 "identical protein binding" evidence=IPI] [GO:0031539
"positive regulation of anthocyanin metabolic process"
evidence=IMP] [GO:0009740 "gibberellic acid mediated signaling
pathway" evidence=IMP] [GO:0009704 "de-etiolation" evidence=IMP]
[GO:0007623 "circadian rhythm" evidence=RCA] [GO:0009630
"gravitropism" evidence=RCA] [GO:0007165 "signal transduction"
evidence=TAS] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC003970
GO:GO:0009585 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0010017
GO:GO:0009704 GO:GO:0009740 GO:GO:0031539 EMBL:AF100166
EMBL:AF251693 EMBL:AF088280 EMBL:AK117255 EMBL:EF193482
EMBL:EF193483 EMBL:EF193484 EMBL:EF193485 EMBL:EF193486
EMBL:EF193487 EMBL:EF193488 EMBL:EF193489 EMBL:EF193490
EMBL:EF193491 EMBL:EF193492 EMBL:EF193493 EMBL:EF193494
EMBL:EF193495 EMBL:EF193496 IPI:IPI00530297 PIR:H86228
RefSeq:NP_172424.1 RefSeq:NP_849626.1 UniGene:At.10926
ProteinModelPortal:O80536 SMR:O80536 DIP:DIP-33892N IntAct:O80536
STRING:O80536 EnsemblPlants:AT1G09530.1 EnsemblPlants:AT1G09530.2
GeneID:837479 KEGG:ath:AT1G09530 TAIR:At1g09530 eggNOG:NOG285764
InParanoid:O80536 KO:K12126 OMA:WENGQIS PhylomeDB:O80536
ProtClustDB:CLSN2679266 Genevestigator:O80536 GermOnline:AT1G09530
Uniprot:O80536
Length = 524
Score = 134 (52.2 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 27/73 (36%), Positives = 46/73 (63%)
Query: 38 KKVQEPRRVSSVIRDPSHAQDHVIAERKRREKLNQRFIALSALVPGLKKTDKASILGDSI 97
+K P R + A+ H ++ER+RR+++N++ AL L+P K DKAS+L ++I
Sbjct: 327 RKEAGPSRTGLGSKRSRSAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAI 386
Query: 98 KYLKQLQERVKAL 110
+YLK LQ +V+ +
Sbjct: 387 EYLKSLQLQVQIM 399
Score = 37 (18.1 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 10/34 (29%), Positives = 15/34 (44%)
Query: 203 GNSTVDITVVAQMDVESDVTVKDLVKNLQPALRK 236
G+ST+ + D T + NL+P RK
Sbjct: 480 GSSTIGNGSTRDLSGSKDQTTTNNNSNLKPIKRK 513
>UNIPROTKB|Q84LF9 [details] [associations]
symbol:RERJ1 "Transcription Factor" species:4530 "Oryza
sativa" [GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P01106 EMBL:AB040744
ProteinModelPortal:Q84LF9 Gramene:Q84LF9 Genevestigator:Q84LF9
Uniprot:Q84LF9
Length = 310
Score = 131 (51.2 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 27/62 (43%), Positives = 42/62 (67%)
Query: 52 DPSHAQDHVIAERKRREKLNQRFIALSALVPGLKKTDKASILGDSIKYLKQLQ-ERVKAL 110
D A +++ ER RR KLN++ AL ++VP + K DKASI+ D+I+Y+++LQ E + L
Sbjct: 87 DAGGANKNILMERDRRRKLNEKLYALRSVVPNITKMDKASIIKDAIEYIQRLQAEEQQML 146
Query: 111 EE 112
E
Sbjct: 147 RE 148
>TAIR|locus:2116977 [details] [associations]
symbol:AT4G01460 "AT4G01460" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AF488590 EMBL:AF096370 EMBL:AL161492 EMBL:AY099780
EMBL:AY128881 IPI:IPI00528581 PIR:A85019 PIR:T01948
RefSeq:NP_192055.1 UniGene:At.34425 ProteinModelPortal:Q9M128
SMR:Q9M128 EnsemblPlants:AT4G01460.1 GeneID:828089
KEGG:ath:AT4G01460 TAIR:At4g01460 eggNOG:NOG293017
HOGENOM:HOG000238962 InParanoid:Q9M128 OMA:QINGEVM PhylomeDB:Q9M128
ProtClustDB:CLSN2685500 Genevestigator:Q9M128 Uniprot:Q9M128
Length = 315
Score = 131 (51.2 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 42/174 (24%), Positives = 86/174 (49%)
Query: 37 KKKVQEPRRVSSVIRDPSHAQDHVIAERKRREKLNQRFIALSALVPG--LKKTDKASILG 94
+K+ + P+ V + H+ ER RR ++N+ +L +L+P L++ D+ASI+G
Sbjct: 98 RKRTRAPKNKDEV---ENQRMTHIAVERNRRRQMNEHLNSLRSLMPPSFLQRGDQASIVG 154
Query: 95 DSIKYLKQLQERVKALEEQTSK----KTVESMIIVKKSQMIYTDDE---TSPTDIN-FDA 146
+I ++K+L++ +++LE + K +T ++ S + T+ S T N F A
Sbjct: 155 GAIDFIKELEQLLQSLEAEKRKDGTDETPKTASCSSSSSLACTNSSISSVSTTSENGFTA 214
Query: 147 Q-SNQYLPEIEVRVSDRDVLIRIHCEKNNNKGHLANILSEIENVHHLSVLSCNV 199
+ E+E V V +++ C++ K + + IE + L++L +
Sbjct: 215 RFGGGDTTEVEATVIQNHVSLKVRCKRG--KRQILKAIVSIEELK-LAILHLTI 265
>TAIR|locus:4010713915 [details] [associations]
symbol:AT4G28811 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
EMBL:AL161573 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL035353
HOGENOM:HOG000240264 EMBL:AJ519811 IPI:IPI00518617 PIR:H85335
PIR:T04518 RefSeq:NP_001078462.1 UniGene:At.46149
ProteinModelPortal:Q8GT73 SMR:Q8GT73 PRIDE:Q8GT73
EnsemblPlants:AT4G28811.1 GeneID:5008170 KEGG:ath:AT4G28811
TAIR:At4g28811 eggNOG:NOG314238 PhylomeDB:Q8GT73
ProtClustDB:CLSN2699107 Genevestigator:Q8GT73 Uniprot:Q8GT73
Length = 544
Score = 133 (51.9 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 28/64 (43%), Positives = 43/64 (67%)
Query: 48 SVIRDPSHAQD-HVIAERKRREKLNQRFIALSALVPGLKKTDKASILGDSIKYLKQLQER 106
S R S A D H ++ER+RRE++N+R L L+P +KTDK S+L D I+Y+K LQ +
Sbjct: 350 STSRKRSRAADMHNLSERRRRERINERMKTLQELLPRCRKTDKVSMLEDVIEYVKSLQLQ 409
Query: 107 VKAL 110
++ +
Sbjct: 410 IQMM 413
>TAIR|locus:2042556 [details] [associations]
symbol:AT2G31210 "AT2G31210" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC006593 Gene3D:4.10.280.10
SUPFAM:SSF47459 eggNOG:NOG254981 HOGENOM:HOG000083787
ProtClustDB:CLSN2716481 EMBL:AJ519809 EMBL:AK118441 EMBL:BT009675
IPI:IPI00540344 PIR:H84717 RefSeq:NP_180679.2 UniGene:At.38250
ProteinModelPortal:Q8GX46 SMR:Q8GX46 EnsemblPlants:AT2G31210.1
GeneID:817677 KEGG:ath:AT2G31210 TAIR:At2g31210 InParanoid:Q8GX46
OMA:ERERRCH PhylomeDB:Q8GX46 Genevestigator:Q8GX46 Uniprot:Q8GX46
Length = 428
Score = 117 (46.2 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 25/55 (45%), Positives = 35/55 (63%)
Query: 63 ERKRREKLNQRFIALSALVPGLKKTDKASILGDSIKYLKQLQERVKALEEQTSKK 117
ER+RR LN+R+ AL L+P K D+ASIL D I Y+ +L+ RV L+ +K
Sbjct: 219 ERERRCHLNERYEALKLLIPSPSKGDRASILQDGIDYINELRRRVSELKYLVERK 273
Score = 53 (23.7 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 13/49 (26%), Positives = 30/49 (61%)
Query: 147 QSNQYLPEIEVRVSDRDVLIRIHCEKNNNKGHLAN-ILSEIE-NVHHLS 193
Q + E++VR+ D +V I++ +K N L + +L +++ ++HH++
Sbjct: 332 QRKSKVTEVDVRIVDDEVTIKVVQKKKINCLLLVSKVLDQLQLDLHHVA 380
>UNIPROTKB|Q94LR3 [details] [associations]
symbol:OSJNBa0010C11.7 "Helix-loop-helix DNA-binding domain
containing protein, expressed" species:39947 "Oryza sativa Japonica
Group" [GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0003677 EMBL:DP000086 EMBL:AP008216 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AC069300 RefSeq:NP_001065353.1
UniGene:Os.27587 IntAct:Q94LR3 STRING:Q94LR3 GeneID:4349351
KEGG:osa:4349351 ProtClustDB:CLSN2714538 Uniprot:Q94LR3
Length = 191
Score = 122 (48.0 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 25/51 (49%), Positives = 34/51 (66%)
Query: 65 KRREKLNQRFIALSALVPGLKKTDKASILGDSIKYLKQLQERVKALEEQTS 115
KRR+++NQ+ L LVP KTDKAS+L + I YLKQLQ +V+ + S
Sbjct: 12 KRRDRINQKMKTLQKLVPNSSKTDKASMLDEVIDYLKQLQAQVQVMSRMGS 62
>UNIPROTKB|Q8S0C6 [details] [associations]
symbol:B1112D09.6 "Uncharacterized protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:CM000138
HSSP:P01106 EMBL:AP003432 EMBL:AK106333
EnsemblPlants:LOC_Os01g39330.1 eggNOG:NOG273636 OMA:LNDSFHT
Uniprot:Q8S0C6
Length = 454
Score = 130 (50.8 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 26/58 (44%), Positives = 38/58 (65%)
Query: 59 HVIAERKRREKLNQRFIALSALVPGLKKTDKASILGDSIKYLKQLQERVKALEEQTSK 116
H+++ERKRREKLN F L +L+P K DK ++L ++ KYLK L+ + LE +K
Sbjct: 267 HMMSERKRREKLNDSFHTLRSLLPPCSKKDKTTVLINAAKYLKSLETEITELEGTNTK 324
>TAIR|locus:2155543 [details] [associations]
symbol:HEC1 "HECATE 1" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0010500 "transmitting tissue
development" evidence=IGI] [GO:0048462 "carpel formation"
evidence=IMP] [GO:0048445 "carpel morphogenesis" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB020742 EMBL:AF488618 EMBL:AK228927 IPI:IPI00530790
RefSeq:NP_201507.1 UniGene:At.28829 ProteinModelPortal:Q9FHA7
SMR:Q9FHA7 IntAct:Q9FHA7 EnsemblPlants:AT5G67060.1 GeneID:836841
KEGG:ath:AT5G67060 TAIR:At5g67060 eggNOG:NOG267961
HOGENOM:HOG000242863 InParanoid:Q9FHA7 OMA:FLFNSTH PhylomeDB:Q9FHA7
ProtClustDB:CLSN2684406 Genevestigator:Q9FHA7 GO:GO:0048462
GO:GO:0010500 Uniprot:Q9FHA7
Length = 241
Score = 125 (49.1 bits), Expect = 4.4e-06, P = 4.4e-06
Identities = 30/75 (40%), Positives = 49/75 (65%)
Query: 40 VQEPRRVS-SVIRDPSHAQDHVIAERKRREKLNQRFIALSALVPGLKKTDKASILGDSIK 98
V+ P+R + + +DP +A R RRE++++R L LVPG K D AS+L ++I
Sbjct: 118 VKPPKRRNVRISKDPQS-----VAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIH 172
Query: 99 YLKQLQERVKALEEQ 113
Y+K L+++V++LEEQ
Sbjct: 173 YVKFLKKQVQSLEEQ 187
>UNIPROTKB|Q7XKP5 [details] [associations]
symbol:OSJNBb0013O03.11 "OSJNBb0013O03.11 protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP008210 HOGENOM:HOG000006429 EMBL:AL731621
RefSeq:NP_001173851.1 UniGene:Os.98890
EnsemblPlants:LOC_Os04g23440.1 GeneID:9269507 KEGG:osa:9269507
OMA:NIAMERD Genevestigator:Q7XKP5 Uniprot:Q7XKP5
Length = 293
Score = 126 (49.4 bits), Expect = 5.8e-06, P = 5.8e-06
Identities = 30/84 (35%), Positives = 52/84 (61%)
Query: 59 HVIAERKRREKLNQRFIALSALVPGLKKTDKASILGDSIKYLKQLQERVKALEEQTSKKT 118
++ ER RR++LN++ AL A+VP + K DKASI+ D+I ++++LQE + L ++ S
Sbjct: 98 NIAMERDRRKRLNEKLFALRAVVPKITKMDKASIVRDAIAHIEKLQEEERQLLDEIS--V 155
Query: 119 VESMIIVKKSQMIYTDDE--TSPT 140
++S V + + DD T P+
Sbjct: 156 LQSAAAVAATAVEDVDDSGVTMPS 179
>TAIR|locus:2147760 [details] [associations]
symbol:LRL3 "AT5G58010" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0080147 "root hair cell development"
evidence=IMP] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 HSSP:P36956 HOGENOM:HOG000239571 GO:GO:0080147
EMBL:AB026635 EMBL:AF488614 IPI:IPI00540554 RefSeq:NP_200609.1
UniGene:At.29300 ProteinModelPortal:Q9LSQ3 SMR:Q9LSQ3 PRIDE:Q9LSQ3
EnsemblPlants:AT5G58010.1 GeneID:835913 KEGG:ath:AT5G58010
TAIR:At5g58010 eggNOG:NOG252939 InParanoid:Q9LSQ3 OMA:TEQRVAK
PhylomeDB:Q9LSQ3 ProtClustDB:CLSN2916934 Genevestigator:Q9LSQ3
Uniprot:Q9LSQ3
Length = 297
Score = 126 (49.4 bits), Expect = 6.0e-06, P = 6.0e-06
Identities = 27/52 (51%), Positives = 37/52 (71%)
Query: 59 HVIAERKRREKLNQRFIALSALVPGLKKTDKASILGDSIKYLKQLQERVKAL 110
H IAER RRE++ +R +L LVP KTDKAS+L + I+Y++ LQ +VK L
Sbjct: 110 HSIAERLRRERIAERMKSLQELVPNTNKTDKASMLDEIIEYVRFLQLQVKVL 161
>UNIPROTKB|Q5NAE0 [details] [associations]
symbol:P0498A12.33 "Putative BP-5 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP003020
ProteinModelPortal:Q5NAE0 Gramene:Q5NAE0 Uniprot:Q5NAE0
Length = 565
Score = 130 (50.8 bits), Expect = 6.0e-06, P = 6.0e-06
Identities = 25/59 (42%), Positives = 42/59 (71%)
Query: 56 AQDHVIAERKRREKLNQRFIALSALVPGLKKTDKASILGDSIKYLKQLQERVKALEEQT 114
A+ H ++ER+RR+++N++ AL L+P K DKAS+L ++I+YLK LQ +V+ + T
Sbjct: 314 AEVHNLSERRRRDRINEKMRALQELIPNCNKIDKASMLDEAIEYLKTLQLQVQMMSMGT 372
>TAIR|locus:2047555 [details] [associations]
symbol:LRL1 "AT2G24260" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0080147
"root hair cell development" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC005967
HOGENOM:HOG000239571 GO:GO:0080147 EMBL:AF488599 EMBL:AK176370
EMBL:AK176390 EMBL:BT026512 IPI:IPI00528969 PIR:E84634
RefSeq:NP_180003.1 UniGene:At.20792 ProteinModelPortal:Q9ZUG9
SMR:Q9ZUG9 EnsemblPlants:AT2G24260.1 GeneID:816961
KEGG:ath:AT2G24260 TAIR:At2g24260 eggNOG:NOG284260
InParanoid:Q9ZUG9 OMA:STATCHS PhylomeDB:Q9ZUG9
ProtClustDB:CLSN2683027 Genevestigator:Q9ZUG9 Uniprot:Q9ZUG9
Length = 350
Score = 127 (49.8 bits), Expect = 6.3e-06, P = 6.3e-06
Identities = 29/52 (55%), Positives = 36/52 (69%)
Query: 59 HVIAERKRREKLNQRFIALSALVPGLKKTDKASILGDSIKYLKQLQERVKAL 110
H IAER RRE++ +R AL LVP KTDKAS+L + I Y+K LQ +VK L
Sbjct: 149 HSIAERLRRERIAERMKALQELVPNGNKTDKASMLDEIIDYVKFLQLQVKVL 200
>UNIPROTKB|Q6ETQ5 [details] [associations]
symbol:P0613F08.25 "Basic helix-loop-helix-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP004801 ProteinModelPortal:Q6ETQ5
EnsemblPlants:LOC_Os02g15760.1 Gramene:Q6ETQ5 OMA:FRILETW
Uniprot:Q6ETQ5
Length = 415
Score = 128 (50.1 bits), Expect = 6.5e-06, P = 6.5e-06
Identities = 26/93 (27%), Positives = 53/93 (56%)
Query: 36 SKKKVQEPRRVSSVIRDPSHA--QDHVIAERKRREKLNQRFIALSALVPG--LKKTDKAS 91
S P +++ + D A H+ ER RR+++N+ L +L+P +K+ D+AS
Sbjct: 109 SSSSSSSPAALAAAVGDGDGAAKMSHITVERNRRKQMNEHLAVLRSLMPCFYVKRGDQAS 168
Query: 92 ILGDSIKYLKQLQERVKALEEQTSKKTVESMII 124
I+G + Y+K+LQ+ +++LE + ++K ++
Sbjct: 169 IIGGVVDYIKELQQVLRSLEAKKNRKAYADQVL 201
>TAIR|locus:2126624 [details] [associations]
symbol:LRL2 "AT4G30980" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0080147
"root hair cell development" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL022198
EMBL:AL161578 HOGENOM:HOG000239571 GO:GO:0080147
ProtClustDB:CLSN2683027 EMBL:AF488601 IPI:IPI00524968 PIR:G85362
RefSeq:NP_194827.2 UniGene:At.31786 ProteinModelPortal:Q8S3D5
SMR:Q8S3D5 EnsemblPlants:AT4G30980.1 GeneID:829223
KEGG:ath:AT4G30980 TAIR:At4g30980 eggNOG:NOG295725
InParanoid:O65552 OMA:GGSHENT PhylomeDB:Q8S3D5
Genevestigator:Q8S3D5 Uniprot:Q8S3D5
Length = 310
Score = 126 (49.4 bits), Expect = 6.6e-06, P = 6.6e-06
Identities = 32/70 (45%), Positives = 42/70 (60%)
Query: 42 EPRRVSSVIRDPSHAQD-HVIAERKRREKLNQRFIALSALVPGLKKTDKASILGDSIKYL 100
+P+ V A D H IAER RRE++ +R +L LVP KTDKAS+L + I Y+
Sbjct: 123 QPQTKPKVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNGNKTDKASMLDEIIDYV 182
Query: 101 KQLQERVKAL 110
K LQ +VK L
Sbjct: 183 KFLQLQVKVL 192
>TAIR|locus:2074865 [details] [associations]
symbol:HEC2 "AT3G50330" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010500 "transmitting tissue development" evidence=IGI]
[GO:0048462 "carpel formation" evidence=IMP] [GO:0080126 "ovary
septum development" evidence=IGI] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL132976
HOGENOM:HOG000242863 ProtClustDB:CLSN2684406 GO:GO:0048462
GO:GO:0010500 EMBL:BT010607 EMBL:AK175679 EMBL:AK175912
EMBL:AK176020 IPI:IPI00532987 PIR:T45579 RefSeq:NP_190602.1
UniGene:At.35505 ProteinModelPortal:Q9SND4 SMR:Q9SND4 IntAct:Q9SND4
EnsemblPlants:AT3G50330.1 GeneID:824195 KEGG:ath:AT3G50330
TAIR:At3g50330 eggNOG:NOG315110 InParanoid:Q9SND4 OMA:NANMAAM
PhylomeDB:Q9SND4 Genevestigator:Q9SND4 GO:GO:0080126 Uniprot:Q9SND4
Length = 231
Score = 122 (48.0 bits), Expect = 9.0e-06, P = 9.0e-06
Identities = 29/76 (38%), Positives = 49/76 (64%)
Query: 38 KKVQEPRRVS-SVIRDPSHAQDHVIAERKRREKLNQRFIALSALVPGLKKTDKASILGDS 96
+ V+ P+R + + +DP +A R RRE++++R L LVPG K D AS+L ++
Sbjct: 113 ESVKPPKRKNVRISKDPQS-----VAARHRRERISERIRILQRLVPGGTKMDTASMLDEA 167
Query: 97 IKYLKQLQERVKALEE 112
I Y+K L+++V++LEE
Sbjct: 168 IHYVKFLKKQVQSLEE 183
>TAIR|locus:2117788 [details] [associations]
symbol:AT4G28800 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AL161573
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL035353 IPI:IPI00517558
IPI:IPI01020410 PIR:T04519 RefSeq:NP_194609.5 UniGene:At.71648
ProteinModelPortal:Q9SVU7 SMR:Q9SVU7 GeneID:829001
KEGG:ath:AT4G28800 TAIR:At4g28800 InParanoid:Q9SVU7
Genevestigator:Q9SVU7 Uniprot:Q9SVU7
Length = 445
Score = 127 (49.8 bits), Expect = 9.6e-06, P = 9.6e-06
Identities = 26/69 (37%), Positives = 43/69 (62%)
Query: 42 EPRRVSSVIRDPSHAQDHVIAERKRREKLNQRFIALSALVPGLKKTDKASILGDSIKYLK 101
E R S+ + A+ H +AER+RREK+N++ L L+P K+ K S L D+I+Y+K
Sbjct: 243 EEARGSTSRKRSRTAEMHNLAERRRREKINEKMKTLQQLIPRCNKSTKVSTLDDAIEYVK 302
Query: 102 QLQERVKAL 110
LQ +++ +
Sbjct: 303 SLQSQIQGM 311
>TAIR|locus:2092216 [details] [associations]
symbol:bHLH121 "AT3G19860" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006635 "fatty
acid beta-oxidation" evidence=RCA] [GO:0016558 "protein import into
peroxisome matrix" evidence=RCA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AB025631
HOGENOM:HOG000005852 EMBL:AF488633 EMBL:AY065107 EMBL:AY081703
IPI:IPI00517171 IPI:IPI00657162 RefSeq:NP_001030729.1
RefSeq:NP_188620.1 UniGene:At.20167 ProteinModelPortal:Q9LT23
SMR:Q9LT23 IntAct:Q9LT23 STRING:Q9LT23 EnsemblPlants:AT3G19860.2
GeneID:821523 KEGG:ath:AT3G19860 TAIR:At3g19860 eggNOG:NOG237057
InParanoid:Q9LT23 OMA:GSIPMHP PhylomeDB:Q9LT23
ProtClustDB:CLSN2684712 Genevestigator:Q9LT23 Uniprot:Q9LT23
Length = 337
Score = 124 (48.7 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 32/92 (34%), Positives = 52/92 (56%)
Query: 63 ERKRREKLNQRFIAL-SALVPGLKKTDKASILGDSIKYLKQLQERVKALEEQTSKKTVES 121
E+ RREKLN+ F+ L + L P K DKA+IL D+++ LK+L V L+ + + T ES
Sbjct: 67 EKLRREKLNEHFVELGNVLDPERPKNDKATILTDTVQLLKELTSEVNKLKSEYTALTDES 126
Query: 122 MIIVKKSQMIYTDDETSPTDI-NFDAQSNQYL 152
+ ++ + + + +DI N + Q Q L
Sbjct: 127 RELTQEKNDLREEKTSLKSDIENLNLQYQQRL 158
>UNIPROTKB|Q69Y51 [details] [associations]
symbol:P0698A06.26-2 "Putative bHLH transcription factor
PTF1" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 InterPro:IPR024097
InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459
PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 EMBL:AP003514
ProteinModelPortal:Q69Y51 EnsemblPlants:LOC_Os06g09370.3
Gramene:Q69Y51 HOGENOM:HOG000241730 Uniprot:Q69Y51
Length = 401
Score = 125 (49.1 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 28/52 (53%), Positives = 35/52 (67%)
Query: 59 HVIAERKRREKLNQRFIALSALVPGLKKTDKASILGDSIKYLKQLQERVKAL 110
H IAER RREK+++R L LVP K DKAS+L + I Y+K LQ +VK L
Sbjct: 250 HSIAERLRREKISERMKNLQVLVPNSNKADKASMLDEIIDYVKFLQLQVKVL 301
>TAIR|locus:2089418 [details] [associations]
symbol:AT3G21330 "AT3G21330" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP001305 EMBL:AF488617 EMBL:BT004279 EMBL:BT020364
IPI:IPI00541948 RefSeq:NP_188770.1 UniGene:At.38078
ProteinModelPortal:Q8S3D2 SMR:Q8S3D2 EnsemblPlants:AT3G21330.1
GeneID:821687 KEGG:ath:AT3G21330 TAIR:At3g21330 eggNOG:NOG330001
HOGENOM:HOG000095219 InParanoid:Q9LIG3 OMA:LMARELC PhylomeDB:Q8S3D2
ProtClustDB:CLSN2685101 Genevestigator:Q8S3D2 Uniprot:Q8S3D2
Length = 373
Score = 124 (48.7 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 30/78 (38%), Positives = 47/78 (60%)
Query: 40 VQEPRRVS-SVIRDPSHAQDHVIAERKRREKLNQRFIALSALVPGLKKTDKASILGDSIK 98
V++P+R + + DP +A R+RRE+++++ L LVPG K D AS+L ++
Sbjct: 265 VEKPKRKNVKISTDPQ-----TVAARQRRERISEKIRVLQTLVPGGTKMDTASMLDEAAN 319
Query: 99 YLKQLQERVKALEEQTSK 116
YLK L+ +VKALE K
Sbjct: 320 YLKFLRAQVKALENLRPK 337
>TAIR|locus:2168235 [details] [associations]
symbol:AT5G65320 "AT5G65320" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AB011479 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238962 EMBL:AY070095 EMBL:AY096704
EMBL:AF488625 IPI:IPI00548412 RefSeq:NP_201335.1 UniGene:At.28395
ProteinModelPortal:Q9FKQ6 SMR:Q9FKQ6 EnsemblPlants:AT5G65320.1
GeneID:836657 KEGG:ath:AT5G65320 TAIR:At5g65320 eggNOG:NOG237691
InParanoid:Q9FKQ6 OMA:PNDQASI PhylomeDB:Q9FKQ6
ProtClustDB:CLSN2916276 Genevestigator:Q9FKQ6 Uniprot:Q9FKQ6
Length = 296
Score = 122 (48.0 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 52/215 (24%), Positives = 104/215 (48%)
Query: 34 FCSKKKVQEPRRVSSVIRDPSHAQDHVIAERKRREKLNQRFIALSALVP--GLKKTDKAS 91
F S+K+ + R +++ + +H+ ER RR+++N L +++P + D+AS
Sbjct: 81 FLSRKRRR--RSEKTIVDKENQRMNHIAVERNRRKQMNHFLSILKSMMPLSYSQPNDQAS 138
Query: 92 ILGDSIKYLKQLQERVKALEEQT-SKKTVESMIIVKKSQMI--Y-TDDETSPTDINFDAQ 147
I+ +I YLK+L++R+++LE Q + K +S I M Y T T+ + +
Sbjct: 139 IIEGTISYLKKLEQRLQSLEAQLKATKLNQSPNIFSDFFMFPQYSTATATATATASSSSS 198
Query: 148 SNQYLPEIEVRVSDRDV-LIRIHCE-KNNNKGH---LANILSEIENVHHLSVLSCNVLPF 202
S+ + +EV V+D +V ++ H K K L I++E ++ LS L N+
Sbjct: 199 SHHHHKRLEV-VADVEVTMVERHANIKVLTKTQPRLLFKIINEFNSLG-LSTLHLNLTTS 256
Query: 203 GN-STVDITVVAQMDVESDVTVKDLVKNLQPALRK 236
+ S +V + D + + ++ + +R+
Sbjct: 257 KDMSLFTFSVKVEADCQLTPSGNEVANTVHEVVRR 291
>TAIR|locus:2085964 [details] [associations]
symbol:BHLH32 "AT3G25710" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009718
"anthocyanin-containing compound biosynthetic process"
evidence=IMP] [GO:0016036 "cellular response to phosphate
starvation" evidence=IMP] [GO:0080147 "root hair cell development"
evidence=IMP] [GO:0048364 "root development" evidence=IEP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AB028607
GO:GO:0003677 GO:GO:0009718 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0016036
HOGENOM:HOG000243133 ProtClustDB:CLSN2689090 EMBL:DQ205679
EMBL:AY058840 EMBL:AY079033 EMBL:AY086383 EMBL:AF488571
IPI:IPI00523379 RefSeq:NP_189199.1 UniGene:At.22148
ProteinModelPortal:Q9LS08 SMR:Q9LS08 IntAct:Q9LS08 STRING:Q9LS08
PRIDE:Q9LS08 EnsemblPlants:AT3G25710.1 GeneID:822159
KEGG:ath:AT3G25710 TAIR:At3g25710 eggNOG:NOG304577 OMA:RERINTH
PhylomeDB:Q9LS08 Genevestigator:Q9LS08 GO:GO:0080147 Uniprot:Q9LS08
Length = 344
Score = 122 (48.0 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 30/104 (28%), Positives = 53/104 (50%)
Query: 33 QFCSKKKVQEPRRVSSVIRDPSHAQDHVIAERKRREKLNQRFIALSALVPGLKKTDKASI 92
+ K QE ++ SH++ AER+RRE++N L +++P KTDKAS+
Sbjct: 114 EIMGKLSAQEVMDAKALAASKSHSE----AERRRRERINTHLAKLRSILPNTTKTDKASL 169
Query: 93 LGDSIKYLKQLQERVKALEEQTSKKTVESMIIVKKSQMIYTDDE 136
L + I+++K+L+ + + + T + V S Y D+E
Sbjct: 170 LAEVIQHMKELKRQTSQITDTYQVPTECDDLTVDSS---YNDEE 210
>TAIR|locus:4010713916 [details] [associations]
symbol:AT4G28815 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
EMBL:AL161573 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL035353
PIR:H85335 PIR:T04518 EMBL:AJ577586 IPI:IPI00530422
RefSeq:NP_001078463.1 UniGene:At.71260 ProteinModelPortal:Q7XHI7
SMR:Q7XHI7 EnsemblPlants:AT4G28815.1 GeneID:5008171
KEGG:ath:AT4G28815 TAIR:At4g28815 eggNOG:NOG83291 PhylomeDB:Q7XHI7
Genevestigator:Q7XHI7 Uniprot:Q7XHI7
Length = 307
Score = 121 (47.7 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 28/74 (37%), Positives = 45/74 (60%)
Query: 36 SKKKVQ--EPRRVSSVIRDPSHAQDHVIAERKRREKLNQRFIALSALVPGLKKTDKASIL 93
S ++Q E R S+ + A+ H +AER+RREK+N+R L L+P K+ K S+L
Sbjct: 130 SAPRIQGTEEARGSTSRKRSRAAEMHNLAERRRREKINERMKTLQQLIPRCNKSTKVSML 189
Query: 94 GDSIKYLKQLQERV 107
D I+Y+K L+ ++
Sbjct: 190 EDVIEYVKSLEMQI 203
>TAIR|locus:2163163 [details] [associations]
symbol:PIF7 "AT5G61270" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;IDA] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0003690 "double-stranded DNA binding" evidence=IDA] [GO:0009416
"response to light stimulus" evidence=IDA] [GO:0009704
"de-etiolation" evidence=IMP] [GO:0016607 "nuclear speck"
evidence=IDA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0016607
GO:GO:0003700 GO:GO:0006351 GO:GO:0003690 GO:GO:0009585
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AB010073 HSSP:P22415
GO:GO:0009704 EMBL:AF488604 EMBL:BX831447 EMBL:AY568656
EMBL:AJ630484 EMBL:AK220640 IPI:IPI00537261 IPI:IPI00656604
RefSeq:NP_001032117.1 RefSeq:NP_200935.2 UniGene:At.29114
ProteinModelPortal:Q570R7 SMR:Q570R7 IntAct:Q570R7 STRING:Q570R7
EnsemblPlants:AT5G61270.1 GeneID:836248 KEGG:ath:AT5G61270
TAIR:At5g61270 eggNOG:NOG286182 HOGENOM:HOG000097081
InParanoid:Q9FLK6 OMA:HNESERR PhylomeDB:Q570R7
ProtClustDB:CLSN2681114 Genevestigator:Q570R7 Uniprot:Q570R7
Length = 366
Score = 122 (48.0 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 25/50 (50%), Positives = 35/50 (70%)
Query: 59 HVIAERKRREKLNQRFIALSALVPGLKKTDKASILGDSIKYLKQLQERVK 108
H +ER+RR+++NQR L L+P K DK SIL D I++LKQLQ +V+
Sbjct: 171 HNESERRRRDRINQRMRTLQKLLPTASKADKVSILDDVIEHLKQLQAQVQ 220
>TAIR|locus:2080600 [details] [associations]
symbol:bHLH38 "basic helix-loop-helix 38" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0010106 "cellular response to iron ion
starvation" evidence=IEP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0055072 "iron ion homeostasis" evidence=IGI]
InterPro:IPR011598 InterPro:IPR015660 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 PANTHER:PTHR13935 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL138655 GO:GO:0055072
HSSP:P22415 HOGENOM:HOG000238662 ProtClustDB:CLSN2683761
EMBL:AF488576 EMBL:AK221542 EMBL:BT026419 IPI:IPI00516990
PIR:T47757 RefSeq:NP_191256.1 UniGene:At.34879
ProteinModelPortal:Q9M1K1 SMR:Q9M1K1 IntAct:Q9M1K1 STRING:Q9M1K1
DNASU:824864 EnsemblPlants:AT3G56970.1 GeneID:824864
KEGG:ath:AT3G56970 TAIR:At3g56970 eggNOG:NOG290862
InParanoid:Q9M1K1 OMA:KINCEEL PhylomeDB:Q9M1K1
Genevestigator:Q9M1K1 Uniprot:Q9M1K1
Length = 253
Score = 119 (46.9 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 36/134 (26%), Positives = 72/134 (53%)
Query: 58 DHVIAERKRREKLNQRFIALSALVPGLKKTDKASI---LGDSIKYLKQLQERVKALEEQT 114
+H +ER RR+K+N F +L + +P ++ K SI + S+KY+ +LQ++VK L ++
Sbjct: 75 NHNASERDRRKKINTLFSSLRSCLPASDQSKKLSIPETVSKSLKYIPELQQQVKRLIQK- 133
Query: 115 SKKTVESMIIVKKSQMIYTDDETSPTDINFDAQSNQYLPEIEV-RVSDRDVLIRIHCEKN 173
K+ + + ++ +Y D+ P + YL + R+ D +V++++ K
Sbjct: 134 -KEEILVRVSGQRDFELY--DKQQPKAVA------SYLSTVSATRLGDNEVMVQVSSSKI 184
Query: 174 NNKGHLANILSEIE 187
+N ++N+L IE
Sbjct: 185 HNFS-ISNVLGGIE 197
>TAIR|locus:2135169 [details] [associations]
symbol:bHLH11 "AT4G36060" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0009507
"chloroplast" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0009507 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AL161588
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL022373 EMBL:AF251696
EMBL:AY090362 EMBL:BT000535 IPI:IPI00517622 IPI:IPI00521706
PIR:T05498 RefSeq:NP_195330.2 RefSeq:NP_849566.1 UniGene:At.43990
ProteinModelPortal:Q8W2F2 SMR:Q8W2F2 IntAct:Q8W2F2 PRIDE:Q8W2F2
EnsemblPlants:AT4G36060.1 GeneID:829762 KEGG:ath:AT4G36060
TAIR:At4g36060 eggNOG:NOG307055 HOGENOM:HOG000005852 OMA:PYSASVN
PhylomeDB:Q8W2F2 ProtClustDB:CLSN2690363 Genevestigator:Q8W2F2
Uniprot:Q8W2F2
Length = 286
Score = 120 (47.3 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 31/98 (31%), Positives = 56/98 (57%)
Query: 63 ERKRREKLNQRFIAL-SALVPGLKKTDKASILGDSIKYLKQLQERVKALEEQTSKKTVES 121
E+ RR+KL ++F+ L +AL P K+DKAS+L D+I+ LK + +V L+ + + ES
Sbjct: 53 EKLRRDKLKEQFLELGNALDPNRPKSDKASVLTDTIQMLKDVMNQVDRLKAEYETLSQES 112
Query: 122 MIIVKKSQMIYTDDETSPTDINFDAQSNQYLPEIEVRV 159
++++ + + T +DI + + QY I+ V
Sbjct: 113 RELIQEKSELREEKATLKSDI--EILNAQYQHRIKTMV 148
>UNIPROTKB|Q58GE3 [details] [associations]
symbol:UDT1 "Undeveloped tapetum 1" species:39947 "Oryza
sativa Japonica Group" [GO:0005634 "nucleus" evidence=IDA]
[GO:0048656 "tapetal layer formation" evidence=IMP] [GO:0048658
"tapetal layer development" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0048656 EMBL:AY953870
STRING:Q58GE3 KEGG:dosa:Os07t0549600-01 Gramene:Q58GE3
HOGENOM:HOG000084429 Uniprot:Q58GE3
Length = 234
Score = 118 (46.6 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 45/188 (23%), Positives = 85/188 (45%)
Query: 41 QEPRRVSSVIRDPSHAQDHVIAERKRREKLNQRFIALSALVPGLKKTDKASILGDSIKYL 100
Q+ ++ ++ ++ AER+RR +LN AL A+VP + K K + L D+I+++
Sbjct: 48 QQQQQAAAAAMGKEFKSKNLEAERRRRGRLNGNIFALRAVVPKITKMSKEATLSDAIEHI 107
Query: 101 KQLQERVKALEEQTSKKTVESMIIVKKSQMIYTDDETSPTDINFDAQSNQYLPEIE-VRV 159
K LQ V L+ Q E+ +K + PT+ + Y ++E + +
Sbjct: 108 KNLQNEVLELQRQLGDSPGEAW---EKQGSASCSESFVPTE------NAHYQGQVELISL 158
Query: 160 SDRDVLIRIHCEKNNNKGHLANILSEIENVHHLSVLSCNVLPF-GNSTVDITVVAQMDVE 218
++I K G +L + + + + VLS N + F G + T+ ++ E
Sbjct: 159 GSSKYNLKIFWTKR--AGLFTKVLEALCS-YKVQVLSLNTISFYGYAESFFTI--EVKGE 213
Query: 219 SDVTVKDL 226
DV + +L
Sbjct: 214 QDVVMVEL 221
>TAIR|locus:2158392 [details] [associations]
symbol:BHLH92 "AT5G43650" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB016875 EMBL:AY065390 EMBL:AY096718 IPI:IPI00529613
RefSeq:NP_199178.1 UniGene:At.28504 ProteinModelPortal:Q9FIX5
SMR:Q9FIX5 PRIDE:Q9FIX5 EnsemblPlants:AT5G43650.1 GeneID:834385
KEGG:ath:AT5G43650 TAIR:At5g43650 eggNOG:NOG311504
HOGENOM:HOG000090799 InParanoid:Q9FIX5 OMA:QSYLALH PhylomeDB:Q9FIX5
ProtClustDB:CLSN2686830 Genevestigator:Q9FIX5 Uniprot:Q9FIX5
Length = 247
Score = 113 (44.8 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 31/92 (33%), Positives = 53/92 (57%)
Query: 38 KKVQEPRRVSSVIRDPSHAQDHVIAERKRREKLNQRFIALSALVPGLKKTDKASILG--- 94
+K E ++ ++V + ++ H++ ER RREK Q ++AL +L+P K DK SI+
Sbjct: 70 RKNWEEKK-NTVAPEKERSRRHMLKERTRREKQKQSYLALHSLLPFATKNDKNSIVEKAV 128
Query: 95 DSIKYL----KQLQERVKALEEQTSKKTVESM 122
D I L K+L R+K +EE+++K + M
Sbjct: 129 DEIAKLQRLKKELVRRIKVIEEKSAKDGHDEM 160
Score = 38 (18.4 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 12/63 (19%), Positives = 30/63 (47%)
Query: 174 NNKGHLANILSEIENVHHLSVLSCNVLPFGNSTVDITVVAQMDVESDVTVKDLVKNLQPA 233
N K L+ + S +E +H+L + + + A M +E+ + +++ K ++
Sbjct: 168 NLKEPLSGLDSMLEALHYLKSMGTKLKTVHANFSPQEFSATMTIETQIRGEEVEKRVERR 227
Query: 234 LRK 236
L++
Sbjct: 228 LQE 230
>TAIR|locus:2117773 [details] [associations]
symbol:AT4G28790 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AL161573
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL035353 EMBL:BT015828
EMBL:BT020214 IPI:IPI00521625 IPI:IPI00529771 IPI:IPI00915578
PIR:T04520 RefSeq:NP_194608.3 RefSeq:NP_974634.1 UniGene:At.31988
ProteinModelPortal:Q9SVU6 SMR:Q9SVU6 PRIDE:Q9SVU6
EnsemblPlants:AT4G28790.1 GeneID:829000 KEGG:ath:AT4G28790
TAIR:At4g28790 HOGENOM:HOG000240264 InParanoid:Q9SVU6
PhylomeDB:Q9SVU6 ProtClustDB:CLSN2680993 Genevestigator:Q9SVU6
Uniprot:Q9SVU6
Length = 413
Score = 122 (48.0 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 22/50 (44%), Positives = 37/50 (74%)
Query: 59 HVIAERKRREKLNQRFIALSALVPGLKKTDKASILGDSIKYLKQLQERVK 108
H ++ER+RR+K+N+ AL L+P KTD++S+L D I+Y+K LQ +++
Sbjct: 282 HKLSERRRRQKINEMMKALQELLPRCTKTDRSSMLDDVIEYVKSLQSQIQ 331
>TAIR|locus:2144791 [details] [associations]
symbol:HEC3 "AT5G09750" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010500 "transmitting tissue development" evidence=IGI]
[GO:0048462 "carpel formation" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AB020752
EMBL:AL353994 GO:GO:0048462 GO:GO:0010500 IPI:IPI00522404
PIR:T49923 RefSeq:NP_196537.1 UniGene:At.65500
ProteinModelPortal:Q9LXD8 SMR:Q9LXD8 IntAct:Q9LXD8 STRING:Q9LXD8
EnsemblPlants:AT5G09750.1 GeneID:830835 KEGG:ath:AT5G09750
TAIR:At5g09750 eggNOG:NOG238444 HOGENOM:HOG000210013
InParanoid:Q9LXD8 OMA:NDPIGMA ProtClustDB:CLSN2916890
Genevestigator:Q9LXD8 Uniprot:Q9LXD8
Length = 224
Score = 117 (46.2 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 27/75 (36%), Positives = 46/75 (61%)
Query: 40 VQEPRRVSSVIRDPSHAQDHVIAERKRREKLNQRFIALSALVPGLKKTDKASILGDSIKY 99
V++P+R + I D + +A R RRE++++R L LVPG K D AS+L ++I+Y
Sbjct: 115 VKKPKRRNVRISDDPQS----VAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIRY 170
Query: 100 LKQLQERVKALEEQT 114
+K L+ +++ L T
Sbjct: 171 VKFLKRQIRLLNNNT 185
>TAIR|locus:504956068 [details] [associations]
symbol:AT2G31215 "AT2G31215" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002685 GO:GO:0003700 Gene3D:4.10.280.10 SUPFAM:SSF47459
IPI:IPI00519006 RefSeq:NP_850161.1 UniGene:At.52991
ProteinModelPortal:F4IQQ9 SMR:F4IQQ9 EnsemblPlants:AT2G31215.1
GeneID:817678 KEGG:ath:AT2G31215 PhylomeDB:F4IQQ9 Uniprot:F4IQQ9
Length = 129
Score = 101 (40.6 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 23/57 (40%), Positives = 31/57 (54%)
Query: 61 IAERKRREKLNQRFIALSALVPGLKKTDKASILGDSIKYLKQLQERVKALEEQTSKK 117
+ ER+RR N RF L L+P K +ASI+ D I Y+ +LQ V L+ KK
Sbjct: 26 LTERERRALFNDRFFDLKNLIPNPTKGGEASIVQDGIVYINELQRLVSELKYLVEKK 82
>TAIR|locus:2012393 [details] [associations]
symbol:AT1G68810 "AT1G68810" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC011914 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AC011665 EMBL:AY072161 EMBL:AY122983
IPI:IPI00517468 PIR:H96712 RefSeq:NP_564944.1 UniGene:At.46879
HSSP:P22415 ProteinModelPortal:Q9S7Y1 SMR:Q9S7Y1
EnsemblPlants:AT1G68810.1 GeneID:843213 KEGG:ath:AT1G68810
TAIR:At1g68810 eggNOG:NOG328059 HOGENOM:HOG000243133
InParanoid:Q9S7Y1 OMA:FVIKASL PhylomeDB:Q9S7Y1
ProtClustDB:CLSN2689090 Genevestigator:Q9S7Y1 Uniprot:Q9S7Y1
Length = 368
Score = 121 (47.7 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 29/99 (29%), Positives = 50/99 (50%)
Query: 37 KKKVQEPRRVSSVIRDPSHAQDHVIAERKRREKLNQRFIALSALVPGLKKTDKASILGDS 96
K QE ++ SH++ AER+RRE++N L +++P KTDKAS+L +
Sbjct: 160 KMTAQEIMDAKALAASKSHSE----AERRRRERINNHLAKLRSILPNTTKTDKASLLAEV 215
Query: 97 IKYLKQLQERVKALEEQTSKKTVESMIIVKKSQMIYTDD 135
I+++K+L+ + E T + V ++ T D
Sbjct: 216 IQHVKELKRETSVISETNLVPTESDELTVAFTEEEETGD 254
>TAIR|locus:2080615 [details] [associations]
symbol:bHLH39 "basic helix-loop-helix 39" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0010106 "cellular response to iron ion
starvation" evidence=IEP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0055072 "iron ion homeostasis" evidence=IGI]
InterPro:IPR011598 InterPro:IPR015660 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 PANTHER:PTHR13935 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL138655 GO:GO:0055072
HSSP:P61244 HOGENOM:HOG000238662 ProtClustDB:CLSN2683761
EMBL:AF488577 IPI:IPI00530143 PIR:T47758 RefSeq:NP_191257.1
UniGene:At.64158 ProteinModelPortal:Q9M1K0 SMR:Q9M1K0 IntAct:Q9M1K0
STRING:Q9M1K0 EnsemblPlants:AT3G56980.1 GeneID:824865
KEGG:ath:AT3G56980 TAIR:At3g56980 eggNOG:NOG265528
InParanoid:Q9M1K0 OMA:NCEELSQ PhylomeDB:Q9M1K0
Genevestigator:Q9M1K0 Uniprot:Q9M1K0
Length = 258
Score = 118 (46.6 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 39/134 (29%), Positives = 73/134 (54%)
Query: 58 DHVIAERKRREKLNQRFIALSALVPGLKKTDKASI---LGDSIKYLKQLQERVKALEEQT 114
+H +ER RR K+N F +L + +P ++ K SI + S+KY+ +LQE+VK L ++
Sbjct: 80 NHNASERDRRRKINSLFSSLRSCLPASGQSKKLSIPATVSRSLKYIPELQEQVKKLIKKK 139
Query: 115 SKKTVESMIIVKKSQMIYTDDETSPTDINFDAQSNQYLPEIEV-RVSDRDVLIRIHCEKN 173
+ V+ I +++ Y + P A +N Y+ + R+ D +V+++I K
Sbjct: 140 EELLVQ--ISGQRNTECYV--KQPPK-----AVAN-YISTVSATRLGDNEVMVQISSSKI 189
Query: 174 NNKGHLANILSEIE 187
+N ++N+LS +E
Sbjct: 190 HNFS-ISNVLSGLE 202
>TAIR|locus:2201906 [details] [associations]
symbol:AT1G10120 "AT1G10120" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC004122 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:BT012655 EMBL:AK221806 EMBL:AK229309
EMBL:AK230347 EMBL:AF488606 IPI:IPI00541831 PIR:T00632
RefSeq:NP_172483.4 UniGene:At.43391 UniGene:At.69296
ProteinModelPortal:Q6NKN9 SMR:Q6NKN9 EnsemblPlants:AT1G10120.1
GeneID:837549 KEGG:ath:AT1G10120 TAIR:At1g10120 eggNOG:NOG271189
HOGENOM:HOG000090626 InParanoid:Q6NKN9 OMA:GESSHED PhylomeDB:Q6NKN9
ProtClustDB:CLSN2681496 Genevestigator:Q6NKN9 Uniprot:Q6NKN9
Length = 366
Score = 120 (47.3 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 30/86 (34%), Positives = 49/86 (56%)
Query: 59 HVIAERKRREKLNQRFIALSALVPGLKK-TDKASILGDSIKYLKQLQERVKALEEQTSKK 117
H +AER RREK+++R L LVPG K T KA +L + I Y++ LQ++V+ L + +
Sbjct: 217 HSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATV 276
Query: 118 TVESMIIVKK---SQMIYTDDETSPT 140
E I + + ++ + D +PT
Sbjct: 277 NPEINIDIDRILAKDLLQSRDRNTPT 302
>UNIPROTKB|Q6Z7E7 [details] [associations]
symbol:P0020C11.18 "Putative bHLH transcription factor
PTF1" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 InterPro:IPR024097
InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P36956 PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 EMBL:CM000139
EMBL:AP004865 EMBL:AK241924 EnsemblPlants:LOC_Os02g35660.1
OMA:TTAMQYL Uniprot:Q6Z7E7
Length = 524
Score = 122 (48.0 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 28/52 (53%), Positives = 35/52 (67%)
Query: 59 HVIAERKRREKLNQRFIALSALVPGLKKTDKASILGDSIKYLKQLQERVKAL 110
H IAER RREK++ R L LVP KT+KAS+L + I Y+K LQ +VK L
Sbjct: 325 HSIAERLRREKISDRMKDLQELVPNSNKTNKASMLDEIIDYVKFLQLQVKVL 376
>UNIPROTKB|Q69TX2 [details] [associations]
symbol:P0021C04.13 "BHLH protein-like" species:39947 "Oryza
sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP004687
ProteinModelPortal:Q69TX2 EnsemblPlants:LOC_Os06g10820.1
Gramene:Q69TX2 HOGENOM:HOG000241748 Uniprot:Q69TX2
Length = 211
Score = 115 (45.5 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 30/69 (43%), Positives = 45/69 (65%)
Query: 43 PRRVSSVIRDPSHAQDHVIAERKRREKLNQRFIALSALVPGLKKTDKASILGDSIKYLKQ 102
PRR ++ R S Q +A R RRE+++QR AL LVPG + D AS+L ++I+Y+K
Sbjct: 113 PRRRNA--RVSSEPQS--VAARLRRERVSQRMRALQRLVPGGARLDTASMLEEAIRYVKF 168
Query: 103 LQERVKALE 111
L+ V++LE
Sbjct: 169 LKGHVQSLE 177
>TAIR|locus:2042486 [details] [associations]
symbol:AT2G31220 "AT2G31220" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC006593 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:BT005711 EMBL:BT008608 EMBL:AK228592
EMBL:AF251695 IPI:IPI00521500 PIR:A84718 RefSeq:NP_180680.2
UniGene:At.28314 ProteinModelPortal:Q84TK1 SMR:Q84TK1
EnsemblPlants:AT2G31220.1 GeneID:817679 KEGG:ath:AT2G31220
TAIR:At2g31220 eggNOG:NOG254981 HOGENOM:HOG000083787
InParanoid:Q84TK1 OMA:NTKICEG PhylomeDB:Q84TK1
ProtClustDB:CLSN2716481 Genevestigator:Q84TK1 Uniprot:Q84TK1
Length = 458
Score = 111 (44.1 bits), Expect = 5.5e-05, Sum P(2) = 5.5e-05
Identities = 28/90 (31%), Positives = 45/90 (50%)
Query: 63 ERKRREKLNQRFIALSALVPGLKKTDKASILGDSIKYLKQLQERVKALEEQTSKKTVESM 122
ER+RR N RF L L+P K D+ASI+G++I Y+K+L ++ + KK
Sbjct: 252 ERERRVHFNDRFFDLKNLIPNPTKIDRASIVGEAIDYIKELLRTIEEFKMLVEKKRCGRF 311
Query: 123 IIVKKSQMIY----TDDETSPTDINFDAQS 148
K++++ D E +N+ QS
Sbjct: 312 RSKKRARVGEGGGGEDQEEEEDTVNYKPQS 341
Score = 48 (22.0 bits), Expect = 5.5e-05, Sum P(2) = 5.5e-05
Identities = 11/42 (26%), Positives = 26/42 (61%)
Query: 154 EIEVRVSDRDVLIR-IHCEKNNNKGHLANILSEIE-NVHHLS 193
E++VR+ D +V I+ + +K N +L +++ ++HH++
Sbjct: 369 EVDVRIIDDEVTIKLVQKKKINCLLFTTKVLDQLQLDLHHVA 410
>UNIPROTKB|Q7Y1H4 [details] [associations]
symbol:OSJNBa0094F01.11 "Putative uncharacterized protein
OSJNBa0094F01.11" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:DP000009
EMBL:AP008209 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0009567
EMBL:AC093713 EMBL:AK104412 RefSeq:NP_001051563.1 UniGene:Os.27522
EnsemblPlants:LOC_Os03g58330.1 GeneID:4334429 KEGG:osa:4334429
OMA:TDGTERQ ProtClustDB:CLSN2694399 Uniprot:Q7Y1H4
Length = 294
Score = 118 (46.6 bits), Expect = 5.5e-05, P = 5.5e-05
Identities = 25/52 (48%), Positives = 36/52 (69%)
Query: 59 HVIAERKRREKLNQRFIALSALVPGLKKTDKASILGDSIKYLKQLQERVKAL 110
H IAER RRE++ +R AL LVP KTD+A++L + + Y+K L+ +VK L
Sbjct: 144 HSIAERLRRERIAERMRALQELVPNTNKTDRAAMLDEILDYVKFLRLQVKVL 195
>TAIR|locus:2115200 [details] [associations]
symbol:BEE2 "AT4G36540" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009740 "gibberellic acid mediated signaling pathway"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
PROSITE:PS00678 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL161589 EMBL:Z99708
EMBL:AF488591 EMBL:AF370231 EMBL:AY059122 EMBL:AY054588
EMBL:BT000388 EMBL:AY084997 EMBL:AY138254 IPI:IPI00540245
IPI:IPI00548266 PIR:D85431 RefSeq:NP_195372.1 RefSeq:NP_849508.1
UniGene:At.25403 ProteinModelPortal:Q93VJ4 SMR:Q93VJ4 IntAct:Q93VJ4
PRIDE:Q93VJ4 EnsemblPlants:AT4G36540.1 GeneID:829806
KEGG:ath:AT4G36540 TAIR:At4g36540 eggNOG:NOG240651
InParanoid:Q93VJ4 OMA:ELECHID PhylomeDB:Q93VJ4
ProtClustDB:CLSN2685556 Genevestigator:Q93VJ4 Uniprot:Q93VJ4
Length = 304
Score = 118 (46.6 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 27/81 (33%), Positives = 46/81 (56%)
Query: 36 SKKKVQEPRRVSSVIRDPSHAQDHVIAERKRREKLNQRFIALSALVPGLKK-TDKASILG 94
+ ++Q+P + R H +AER RREK++++ L +VPG K T KA +L
Sbjct: 129 TSSEIQKPDYIHVRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLD 188
Query: 95 DSIKYLKQLQERVKALEEQTS 115
+ I Y++ LQ++V+ L + S
Sbjct: 189 EIINYVQSLQQQVEFLSMKLS 209
>UNIPROTKB|Q2QML8 [details] [associations]
symbol:LOC_Os12g40730 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
InterPro:IPR024097 InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:DP000011 KEGG:dosa:Os12t0599400-00
KEGG:dosa:Os12t0599550-00 Gramene:Q2QML8 HOGENOM:HOG000244163
Uniprot:Q2QML8
Length = 387
Score = 119 (46.9 bits), Expect = 7.0e-05, P = 7.0e-05
Identities = 29/77 (37%), Positives = 44/77 (57%)
Query: 37 KKKVQEPR--RVSSVIRDPSHAQDHVIAE-RKRREKLNQRFIALSALVPGLKKTDKASIL 93
K K PR R S R + D + + +RR K+ +RF L LVPG K+++AS L
Sbjct: 194 KSKQASPRGCRSSQPYRKSGDSIDELFTKFHRRRFKITERFRTLQRLVPGCDKSNQASTL 253
Query: 94 GDSIKYLKQLQERVKAL 110
+I+Y+K LQ ++KA+
Sbjct: 254 DQTIQYMKSLQHQLKAM 270
>UNIPROTKB|Q6ZA99 [details] [associations]
symbol:P0431A03.9 "Os08g0432800 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0003677 EMBL:AP008214 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP004666 EMBL:AK109616 RefSeq:NP_001061870.1
UniGene:Os.56209 EnsemblPlants:LOC_Os08g33590.1 GeneID:4345648
KEGG:osa:4345648 eggNOG:NOG311977 OMA:TSAMMED
ProtClustDB:CLSN2697339 Uniprot:Q6ZA99
Length = 345
Score = 118 (46.6 bits), Expect = 7.6e-05, P = 7.6e-05
Identities = 22/57 (38%), Positives = 39/57 (68%)
Query: 56 AQDHVIAERKRREKLNQRFIALSALVPGLKKTDKASILGDSIKYLKQLQERVKALEE 112
++ H AER+RR+++N L +L+P KTDKAS+L + I+++K+L+ + A+ E
Sbjct: 122 SRSHSEAERRRRQRINGHLARLRSLLPNTTKTDKASLLAEVIEHVKELKRQTSAMME 178
>TAIR|locus:2132303 [details] [associations]
symbol:UNE12 "AT4G02590" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009567 "double fertilization forming a zygote and endosperm"
evidence=IMP] [GO:0031347 "regulation of defense response"
evidence=IMP] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0007275 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000239571
ProtClustDB:CLSN2687635 EMBL:AC002330 EMBL:AL161494 GO:GO:0031347
GO:GO:0009567 EMBL:AF488592 EMBL:AF367328 EMBL:AY143951
EMBL:AY088218 IPI:IPI00545077 IPI:IPI00892352 PIR:T01090
RefSeq:NP_001031577.1 RefSeq:NP_001118919.1 RefSeq:NP_567245.1
UniGene:At.20028 ProteinModelPortal:O22768 SMR:O22768 IntAct:O22768
PaxDb:O22768 PRIDE:O22768 EnsemblPlants:AT4G02590.1
EnsemblPlants:AT4G02590.2 GeneID:828126 KEGG:ath:AT4G02590
TAIR:At4g02590 eggNOG:euNOG02041 InParanoid:O22768 OMA:PAWEKWS
PhylomeDB:O22768 Genevestigator:O22768 Uniprot:O22768
Length = 310
Score = 117 (46.2 bits), Expect = 8.0e-05, P = 8.0e-05
Identities = 24/52 (46%), Positives = 37/52 (71%)
Query: 59 HVIAERKRREKLNQRFIALSALVPGLKKTDKASILGDSIKYLKQLQERVKAL 110
H IAER RRE++ +R AL LVP + KTD+A+++ + + Y+K L+ +VK L
Sbjct: 157 HSIAERLRRERIAERIRALQELVPTVNKTDRAAMIDEIVDYVKFLRLQVKVL 208
>TAIR|locus:2172209 [details] [associations]
symbol:AT5G62610 "AT5G62610" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P36956 EMBL:AB020751 HOGENOM:HOG000238007 EMBL:AY072104
EMBL:AY123023 EMBL:AY084578 EMBL:AF488611 IPI:IPI00518025
RefSeq:NP_201067.1 UniGene:At.24534 UniGene:At.24682
ProteinModelPortal:Q9LV17 SMR:Q9LV17 PaxDb:Q9LV17 PRIDE:Q9LV17
EnsemblPlants:AT5G62610.1 GeneID:836382 KEGG:ath:AT5G62610
GeneFarm:2935 TAIR:At5g62610 eggNOG:NOG269855 InParanoid:Q9LV17
OMA:DDSSKMV PhylomeDB:Q9LV17 ProtClustDB:CLSN2916786
Genevestigator:Q9LV17 Uniprot:Q9LV17
Length = 281
Score = 116 (45.9 bits), Expect = 8.5e-05, P = 8.5e-05
Identities = 28/76 (36%), Positives = 43/76 (56%)
Query: 37 KKKVQEPRRVSSVIRDPSHAQD-HVIAERKRREKLNQRFIALSALVPGLKKT-DKASILG 94
K K + P+ V A D H +AER RREK++++ AL ++PG K KA +L
Sbjct: 141 KNKPEPPKDYIHVRARRGQATDRHSLAERARREKISEKMTALQDIIPGCNKIIGKALVLD 200
Query: 95 DSIKYLKQLQERVKAL 110
+ I Y++ LQ +V+ L
Sbjct: 201 EIINYIQSLQRQVEFL 216
>TAIR|locus:2086198 [details] [associations]
symbol:bHLH34 "AT3G23210" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009718 "anthocyanin-containing compound biosynthetic process"
evidence=RCA] [GO:0009744 "response to sucrose stimulus"
evidence=RCA] [GO:0010224 "response to UV-B" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB025608 EMBL:AY099674 EMBL:AY128853 EMBL:AF488573
IPI:IPI00543123 RefSeq:NP_188962.2 UniGene:At.6338
ProteinModelPortal:Q9LTC7 SMR:Q9LTC7 EnsemblPlants:AT3G23210.1
GeneID:821899 KEGG:ath:AT3G23210 TAIR:At3g23210 eggNOG:NOG287253
HOGENOM:HOG000238732 InParanoid:Q9LTC7 OMA:NEDNIFQ PhylomeDB:Q9LTC7
ProtClustDB:CLSN2689429 Genevestigator:Q9LTC7 Uniprot:Q9LTC7
Length = 320
Score = 117 (46.2 bits), Expect = 8.5e-05, P = 8.5e-05
Identities = 35/97 (36%), Positives = 58/97 (59%)
Query: 32 DQFCSKKKVQEPRRVSSVIRDPSHAQDHVIAERKRREKLNQRFIALSALV-PG-LKKTDK 89
++ CS K+ RR S + + A E+ RREKLN +F+ LS+++ PG KTDK
Sbjct: 148 EEECSGKR----RRTGSCSKPGTKA----CREKLRREKLNDKFMDLSSVLEPGRTPKTDK 199
Query: 90 ASILGDSIKYLKQLQERVKALEEQTSKKTVESMIIVK 126
++IL D+I+ + QL+ L+E T++K +E + +K
Sbjct: 200 SAILDDAIRVVNQLRGEAHELQE-TNQKLLEEIKSLK 235
>UNIPROTKB|Q84LH4 [details] [associations]
symbol:OSJNBb0011H13.2 "Putative Helix-loop-helix
DNA-binding domain containing protein" species:39947 "Oryza sativa
Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0003677 EMBL:DP000009 EMBL:AP008209
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:CM000140 EMBL:AC120983
EMBL:AC135956 RefSeq:NP_001051150.1 UniGene:Os.24540
EnsemblPlants:LOC_Os03g51910.1 GeneID:4333984 KEGG:osa:4333984
eggNOG:NOG262475 OMA:SKQMMLS ProtClustDB:CLSN2694257 Uniprot:Q84LH4
Length = 327
Score = 117 (46.2 bits), Expect = 8.9e-05, P = 8.9e-05
Identities = 42/148 (28%), Positives = 71/148 (47%)
Query: 59 HVIAERKRREKLNQRFIALSALVPGLKK-TDKASILGDSIKYLKQLQERVKALEEQTSKK 117
H +AER RR+K+++R L LVPG K T KA +L + I Y++ LQ +V+ L + +
Sbjct: 158 HSLAERLRRKKISERMKLLQDLVPGCSKITGKAVMLDEIINYVQSLQRQVEFLSMKLATV 217
Query: 118 TVESMIIVKK---SQMIYTDDE------TSPTDINFDAQSNQYL--PEIEVRVSD-RDVL 165
E +++ QM+ + D P A NQ + PE+ VS+ DVL
Sbjct: 218 NPELSFDIEQILSKQMMLSQDRHLAFYGVDPGSSALVAHFNQGIMQPEMLCNVSNPADVL 277
Query: 166 IRIHCEKNNNKGHLANILSEIENVHHLS 193
+ + + + ++N+ HL+
Sbjct: 278 QGTTIQDISTVNQIPAMWEGLQNIPHLN 305
>TAIR|locus:2026037 [details] [associations]
symbol:FBH3 "AT1G51140" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0048573 "photoperiodism, flowering" evidence=IMP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0048573 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AC079828 EMBL:AY034941 EMBL:AY063120
IPI:IPI00519239 PIR:H96548 RefSeq:NP_564583.1 UniGene:At.19155
ProteinModelPortal:Q9C690 SMR:Q9C690 PaxDb:Q9C690 PRIDE:Q9C690
EnsemblPlants:AT1G51140.1 GeneID:841537 KEGG:ath:AT1G51140
TAIR:At1g51140 eggNOG:NOG312535 HOGENOM:HOG000242890
InParanoid:Q9C690 OMA:TKDEDSA PhylomeDB:Q9C690
ProtClustDB:CLSN2917227 Genevestigator:Q9C690 Uniprot:Q9C690
Length = 379
Score = 118 (46.6 bits), Expect = 9.0e-05, P = 9.0e-05
Identities = 26/57 (45%), Positives = 40/57 (70%)
Query: 61 IAERKRREKLNQRFIALSALVPGLK-KTDKASILGDSIKYLKQLQERVKALEEQTSK 116
IAER RR K+++R L LVP + +T+ A +L +++Y+K LQE+VKALEE ++
Sbjct: 317 IAERVRRTKISERMRKLQDLVPNMDTQTNTADMLDLAVQYIKDLQEQVKALEESRAR 373
>UNIPROTKB|Q653A4 [details] [associations]
symbol:OSJNBa0043B22.14 "Basic helix-loop-helix-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:AP008212 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP005470 RefSeq:NP_001174827.1
UniGene:Os.73031 EnsemblPlants:LOC_Os06g33450.2 GeneID:9268477
KEGG:osa:9268477 OMA:YASPAMT Uniprot:Q653A4
Length = 396
Score = 118 (46.6 bits), Expect = 9.6e-05, P = 9.6e-05
Identities = 22/68 (32%), Positives = 43/68 (63%)
Query: 59 HVIAERKRREKLNQRFIALSALVPG--LKKTDKASILGDSIKYLKQLQERVKALEEQTSK 116
H+ ER RR+++N+ L +L+P +K+ D+ASI+G + Y+K+LQ+ + +LE + +
Sbjct: 139 HIAVERNRRKQMNENLAVLRSLMPCFYVKRGDQASIIGGVVDYIKELQQVLHSLEAKKQR 198
Query: 117 KTVESMII 124
K ++
Sbjct: 199 KVYTDQVL 206
>UNIPROTKB|Q2QMM0 [details] [associations]
symbol:LOC_Os12g40710 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
InterPro:IPR024097 InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:DP000011 Gramene:Q2QMM0 Uniprot:Q2QMM0
Length = 266
Score = 115 (45.5 bits), Expect = 0.00010, P = 0.00010
Identities = 27/74 (36%), Positives = 42/74 (56%)
Query: 37 KKKVQEPRRVSSVIRDPSHAQDHVIAERKRREKLNQRFIALSALVPGL-KKTDKASILGD 95
KKK + R A H + E++RR K+ +RF L LVPG K+++AS L
Sbjct: 65 KKKKKASSAAGKASRHRHAAGAHNLTEKRRRFKITERFRTLQRLVPGCDNKSNQASTLDQ 124
Query: 96 SIKYLKQLQERVKA 109
+I+Y+K LQ +++A
Sbjct: 125 TIQYMKSLQHQLEA 138
>TAIR|locus:2041369 [details] [associations]
symbol:PIL1 "phytochrome interacting factor 3-like 1"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009641 "shade
avoidance" evidence=IEP] [GO:0010017 "red or far-red light
signaling pathway" evidence=IEP;IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 EMBL:AC004411 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0010017 GO:GO:0009641 HOGENOM:HOG000115543
ProtClustDB:CLSN2680935 EMBL:AB090873 EMBL:AY219127 EMBL:AY954840
IPI:IPI00545843 PIR:T02190 RefSeq:NP_182220.2 UniGene:At.36425
ProteinModelPortal:Q8L5W8 SMR:Q8L5W8 IntAct:Q8L5W8 STRING:Q8L5W8
PRIDE:Q8L5W8 EnsemblPlants:AT2G46970.1 GeneID:819311
KEGG:ath:AT2G46970 TAIR:At2g46970 eggNOG:NOG291407
InParanoid:Q8L5W8 OMA:MELVCEN PhylomeDB:Q8L5W8
Genevestigator:Q8L5W8 Uniprot:Q8L5W8
Length = 416
Score = 118 (46.6 bits), Expect = 0.00010, P = 0.00010
Identities = 23/52 (44%), Positives = 37/52 (71%)
Query: 59 HVIAERKRREKLNQRFIALSALVPGLKKTDKASILGDSIKYLKQLQERVKAL 110
H + ERKRR++ N++ AL L+P K DKAS+L ++IKY++ LQ +V+ +
Sbjct: 234 HKLYERKRRDEFNKKMRALQDLLPNCYKDDKASLLDEAIKYMRTLQLQVQMM 285
>TAIR|locus:2178560 [details] [associations]
symbol:bHLH071 "AT5G46690" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0007275 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AB016882
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238962
EMBL:AK221613 EMBL:BT025663 EMBL:AY087479 EMBL:AF488603
IPI:IPI00543871 RefSeq:NP_568666.1 UniGene:At.29935
ProteinModelPortal:Q56XR0 SMR:Q56XR0 IntAct:Q56XR0
EnsemblPlants:AT5G46690.1 GeneID:834712 KEGG:ath:AT5G46690
TAIR:At5g46690 eggNOG:NOG262411 InParanoid:Q56XR0 OMA:THANIRI
PhylomeDB:Q56XR0 ProtClustDB:CLSN2917741 Genevestigator:Q56XR0
Uniprot:Q56XR0
Length = 327
Score = 116 (45.9 bits), Expect = 0.00012, P = 0.00012
Identities = 25/79 (31%), Positives = 46/79 (58%)
Query: 37 KKKVQEPRRVSSVIRDPSHAQDHVIAERKRREKLNQRFIALSALVPG--LKKTDKASILG 94
K++ ++PR + + H+ ER RR ++NQ L +L+P K D+ASI+G
Sbjct: 68 KRRRRKPRVCKNEEEAENQRMTHIAVERNRRRQMNQHLSVLRSLMPQPFAHKGDQASIVG 127
Query: 95 DSIKYLKQLQERVKALEEQ 113
+I ++K+L+ ++ +LE Q
Sbjct: 128 GAIDFIKELEHKLLSLEAQ 146
>UNIPROTKB|Q8H7N8 [details] [associations]
symbol:OJ1217B09.8 "BHLH transcription factor"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0003677 EMBL:DP000009
EMBL:AP008209 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC121489
EMBL:HQ858866 EMBL:AK107555 RefSeq:NP_001049217.1 UniGene:Os.31303
STRING:Q8H7N8 EnsemblPlants:LOC_Os03g08930.1 GeneID:4331887
KEGG:dosa:Os10t0376900-01 KEGG:osa:4331887 OMA:RIPPLHL
ProtClustDB:CLSN2693619 Uniprot:Q8H7N8
Length = 329
Score = 116 (45.9 bits), Expect = 0.00012, P = 0.00012
Identities = 26/80 (32%), Positives = 49/80 (61%)
Query: 44 RRVSSVIRDPSHAQ----DHVIAERKRREKLNQRFIALSALVPGL--KKTDKASILGDSI 97
RR + V+++ + H+ ER RR ++N+ L +L+P ++ D+ASI+G +I
Sbjct: 94 RRRTKVVKNKEEIECQRMTHIAVERNRRRQMNEYLAVLRSLMPASYSQRGDQASIVGGAI 153
Query: 98 KYLKQLQERVKALEEQTSKK 117
Y+K+L++ +++LE Q S K
Sbjct: 154 NYVKELEQLLQSLEVQKSLK 173
>UNIPROTKB|Q67TR8 [details] [associations]
symbol:B1342C04.6 "Basic helix-loop-helix (BHLH)-like
protein" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP008215 EMBL:AP005655 EMBL:AP006057
EMBL:AK060477 EMBL:AK070458 RefSeq:NP_001063357.1 UniGene:Os.51063
EnsemblPlants:LOC_Os09g28210.1 GeneID:4347252 KEGG:osa:4347252
OMA:AYPAFHA ProtClustDB:CLSN2697769 Uniprot:Q67TR8
Length = 236
Score = 113 (44.8 bits), Expect = 0.00013, P = 0.00013
Identities = 28/73 (38%), Positives = 46/73 (63%)
Query: 40 VQEPRRVS-SVIRDPSHAQDHVIAERKRREKLNQRFIALSALVPGLKKTDKASILGDSIK 98
V+ P+R + + +DP +A R RRE++++R L LVPG K D AS+L ++I
Sbjct: 137 VRPPKRRNVRISKDPQS-----VAARLRRERISERIRILQRLVPGGTKMDTASMLDEAIH 191
Query: 99 YLKQLQERVKALE 111
Y+K L+ +V++LE
Sbjct: 192 YVKFLKSQVQSLE 204
>TAIR|locus:2115683 [details] [associations]
symbol:AT4G05170 "AT4G05170" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA]
InterPro:IPR011598 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006355 GO:GO:0003677
GO:GO:0006351 EMBL:AL161503 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000095220 EMBL:BT015446 IPI:IPI00532427 IPI:IPI01019413
PIR:A85065 RefSeq:NP_192426.2 UniGene:At.51015
ProteinModelPortal:Q9M0X8 SMR:Q9M0X8 DNASU:825865 GeneID:825865
KEGG:ath:AT4G05170 TAIR:At4g05170 eggNOG:NOG256664 PhylomeDB:Q9M0X8
ArrayExpress:Q9M0X8 Genevestigator:Q9M0X8 Uniprot:Q9M0X8
Length = 298
Score = 115 (45.5 bits), Expect = 0.00013, P = 0.00013
Identities = 32/80 (40%), Positives = 43/80 (53%)
Query: 66 RREKLNQRFIALSALVPGLKKTDKASILGDSIKYLKQLQERVKAL---EEQTSKKTVESM 122
R+EKL R AL LV KTD AS+L ++++Y+K LQE+V L E+ T +
Sbjct: 175 RKEKLGDRITALQQLVSPFGKTDTASVLNEAVEYIKFLQEQVTVLSNPEQNTIGSVQQQQ 234
Query: 123 IIVKKS---QMIYTDDETSP 139
KKS Q +DE SP
Sbjct: 235 CSNKKSINTQGEVEEDECSP 254
>UNIPROTKB|Q6ZGS3 [details] [associations]
symbol:OJ1148_D05.9 "Putative basic-helix-loop-helix
transcription factor" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:CM000139 eggNOG:NOG262411 EMBL:AP004118
EnsemblPlants:LOC_Os02g46560.1 OMA:KRELATY Uniprot:Q6ZGS3
Length = 373
Score = 116 (45.9 bits), Expect = 0.00015, P = 0.00015
Identities = 27/86 (31%), Positives = 55/86 (63%)
Query: 38 KKVQEPRRVSSVIRDPSHAQ--DHVIAERKRREKLNQRFIALSALVPG--LKKTDKASIL 93
+K + R S R+ + Q H+ ER RR ++N+ L +L+P +++ D+ASI+
Sbjct: 69 RKKRRRRAKSCKSREETETQRMTHIAVERNRRRQMNEYLAILRSLMPEPYVQRGDQASIV 128
Query: 94 GDSIKYLKQLQERVKALEEQTSKKTV 119
G +I+++K+L++++++LE Q K+T+
Sbjct: 129 GGAIEFVKELEQQLQSLEAQ--KRTL 152
>UNIPROTKB|Q8S490 [details] [associations]
symbol:rau1 "Transcription factor RAU1" species:4530 "Oryza
sativa" [GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AF465824
ProteinModelPortal:Q8S490 Gramene:Q8S490 Genevestigator:Q8S490
Uniprot:Q8S490
Length = 150
Score = 104 (41.7 bits), Expect = 0.00015, P = 0.00015
Identities = 23/59 (38%), Positives = 38/59 (64%)
Query: 61 IAERKRREKLNQRFIALSALVPGL-KKTDKASILGDSIKYLKQLQERVKALEEQTSKKT 118
IAER RR ++++R L LVP + K+T+ A +L ++ Y+K LQ++VK L + + T
Sbjct: 82 IAERVRRTRISERIRKLQELVPNMDKQTNTADMLDLAVDYIKDLQKQVKGLNDSRANCT 140
>UNIPROTKB|Q69MD0 [details] [associations]
symbol:OSJNBb0019B14.23 "BHLH-like protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP005755
ProteinModelPortal:Q69MD0 EnsemblPlants:LOC_Os09g28900.1
Gramene:Q69MD0 OMA:EMLGAEC Uniprot:Q69MD0
Length = 215
Score = 111 (44.1 bits), Expect = 0.00017, P = 0.00017
Identities = 20/48 (41%), Positives = 33/48 (68%)
Query: 57 QDHVIAERKRREKLNQRFIALSALVPGLKKTDKASILGDSIKYLKQLQ 104
+ H AERKRRE++N L LVP + DKA++LG+ ++Y+++L+
Sbjct: 30 RSHSEAERKRRERINAHLDTLRGLVPSASRMDKAALLGEVVRYVRKLR 77
>UNIPROTKB|Q84T08 [details] [associations]
symbol:OSJNBa0087C10.10 "BHLH transcription factor,
putative, expressed" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:DP000009
EMBL:AP008209 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000238007 EMBL:AC108906 RefSeq:NP_001051605.1
UniGene:Os.33544 STRING:Q84T08 EnsemblPlants:LOC_Os03g58830.1
GeneID:4334471 KEGG:osa:4334471 OMA:GTSTSEW ProtClustDB:CLSN2694415
Uniprot:Q84T08
Length = 265
Score = 113 (44.8 bits), Expect = 0.00017, P = 0.00017
Identities = 25/53 (47%), Positives = 35/53 (66%)
Query: 59 HVIAERKRREKLNQRFIALSALVPGLKKT-DKASILGDSIKYLKQLQERVKAL 110
H +AER RREK+++R L LVPG K KAS+L + I Y++ LQ +V+ L
Sbjct: 147 HSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQALQRQVEFL 199
>TAIR|locus:2202867 [details] [associations]
symbol:BPEp "AT1G59640" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0048446 "petal morphogenesis" evidence=IMP] [GO:0009062 "fatty
acid catabolic process" evidence=RCA] [GO:0009694 "jasmonic acid
metabolic process" evidence=RCA] [GO:0009753 "response to jasmonic
acid stimulus" evidence=RCA] [GO:0009827 "plant-type cell wall
modification" evidence=RCA] [GO:0009860 "pollen tube growth"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0048441 "petal development" evidence=RCA] [GO:0048443 "stamen
development" evidence=RCA] [GO:0048481 "ovule development"
evidence=RCA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238007 EMBL:AM269753 EMBL:AM269754
EMBL:AC009317 EMBL:BT003964 EMBL:BT005064 EMBL:AY086373
EMBL:AB028232 IPI:IPI00530097 IPI:IPI00531813 PIR:B96620 PIR:T52428
RefSeq:NP_564749.1 RefSeq:NP_849829.1 UniGene:At.455
ProteinModelPortal:Q0JXE7 SMR:Q0JXE7 IntAct:Q0JXE7 STRING:Q0JXE7
PRIDE:Q0JXE7 EnsemblPlants:AT1G59640.2 GeneID:842254
KEGG:ath:AT1G59640 TAIR:At1g59640 eggNOG:NOG296410
InParanoid:Q0JXE7 OMA:RGASPEW PhylomeDB:Q0JXE7
ProtClustDB:CLSN2688917 Genevestigator:Q0JXE7 GO:GO:0048446
Uniprot:Q0JXE7
Length = 343
Score = 115 (45.5 bits), Expect = 0.00017, P = 0.00017
Identities = 31/77 (40%), Positives = 44/77 (57%)
Query: 37 KKKVQEPRRVSSVIRDP-SHAQD-HVIAERKRREKLNQRFIALSALVPGLKKT-DKASIL 93
KK+ EP + +R A D H +AER RREK+++R L LVPG K KA +L
Sbjct: 123 KKQQMEPTKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVL 182
Query: 94 GDSIKYLKQLQERVKAL 110
+ I Y++ LQ +V+ L
Sbjct: 183 DEIINYIQSLQRQVEFL 199
>UNIPROTKB|Q6Z339 [details] [associations]
symbol:B1121A12.20 "Os02g0726700 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P36956
EMBL:AP008208 EMBL:AP005284 RefSeq:NP_001047993.1 UniGene:Os.52592
GeneID:4330593 KEGG:osa:4330593 ProtClustDB:CLSN2919237
Uniprot:Q6Z339
Length = 344
Score = 115 (45.5 bits), Expect = 0.00017, P = 0.00017
Identities = 29/76 (38%), Positives = 44/76 (57%)
Query: 47 SSVIRDPSHAQD-HVIAERKRREKLNQRFIALSALVPGL-KKTDKASILGDSIKYLKQLQ 104
SS + PS + H E++RR K+N R L L+P +K DKAS L + I+Y++ LQ
Sbjct: 137 SSADQGPSTPRSKHSATEQRRRTKINDRLEILRELLPHTDQKRDKASFLSEVIEYIRFLQ 196
Query: 105 ERVKALEEQTSKKTVE 120
E+V+ EE ++ E
Sbjct: 197 EKVQKYEEADPERNHE 212
>UNIPROTKB|Q657D1 [details] [associations]
symbol:P0697C12.40 "BHLH transcription-like" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP003141
EMBL:AP003296 Uniprot:Q657D1
Length = 484
Score = 117 (46.2 bits), Expect = 0.00017, P = 0.00017
Identities = 33/115 (28%), Positives = 59/115 (51%)
Query: 41 QEPRRVSSVIRDPSHAQDHVIAERKRREKLNQRFIALSALVPGLKKTDKASILGDSIKYL 100
+ PRR + +R S Q +A R+RRE++++R L LVPG K D AS+L ++ YL
Sbjct: 361 ERPRRRN--VRISSDPQ--TVAARQRRERISERLRVLQKLVPGGAKMDTASMLDEAANYL 416
Query: 101 KQLQERVKALEEQTSKKTVESMIIVKKSQMIYTDDETSPTDINFDAQSNQY-LPE 154
+ L+ +++ L+ + + + + + +SPT N +A + PE
Sbjct: 417 RFLKSQIRELQTLDRRNYPNAAMSINTAAATTMATSSSPTYNNSNAAMPAFAFPE 471
>TAIR|locus:2007534 [details] [associations]
symbol:AT1G03040 "AT1G03040" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AF251692
EMBL:AC006550 EMBL:AY054469 EMBL:AY114633 IPI:IPI00529284
PIR:B86161 RefSeq:NP_001184895.1 RefSeq:NP_563672.1
UniGene:At.20497 ProteinModelPortal:Q93Y00 SMR:Q93Y00 IntAct:Q93Y00
PaxDb:Q93Y00 PRIDE:Q93Y00 EnsemblPlants:AT1G03040.1 GeneID:839446
KEGG:ath:AT1G03040 TAIR:At1g03040 eggNOG:NOG281566
HOGENOM:HOG000239571 InParanoid:Q93Y00 OMA:SIVKPEM PhylomeDB:Q93Y00
ProtClustDB:CLSN2687635 Genevestigator:Q93Y00 Uniprot:Q93Y00
Length = 302
Score = 114 (45.2 bits), Expect = 0.00017, P = 0.00017
Identities = 23/52 (44%), Positives = 37/52 (71%)
Query: 59 HVIAERKRREKLNQRFIALSALVPGLKKTDKASILGDSIKYLKQLQERVKAL 110
H IAER RRE++ +R +L LVP + KTD+A+++ + + Y+K L+ +VK L
Sbjct: 155 HSIAERLRRERIAERIRSLQELVPTVNKTDRAAMIDEIVDYVKFLRLQVKVL 206
>UNIPROTKB|Q5TKP7 [details] [associations]
symbol:OJ1362_G11.11 "Putative uncharacterized protein
OJ1362_G11.11" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AC104713 ProteinModelPortal:Q5TKP7
EnsemblPlants:LOC_Os05g46370.1 KEGG:dosa:Os05t0541400-00
Gramene:Q5TKP7 HOGENOM:HOG000238211 Uniprot:Q5TKP7
Length = 416
Score = 116 (45.9 bits), Expect = 0.00018, P = 0.00018
Identities = 29/71 (40%), Positives = 44/71 (61%)
Query: 41 QEPRRVSSVIRDPSHAQDHVIAERKRREKLNQRFIALSALVPGLKKTDKASILGDSIKYL 100
Q PRR + +R S Q +A R RRE++++R L LVPG K D A++L ++ YL
Sbjct: 294 QRPRRKN--VRISSDPQ--TVAARLRRERVSERLRVLQRLVPGGSKMDTATMLDEAASYL 349
Query: 101 KQLQERVKALE 111
K L+ +++ALE
Sbjct: 350 KFLKSQLEALE 360
>UNIPROTKB|Q6EPZ6 [details] [associations]
symbol:P0014G10.34 "BHLH transcription factor PTF1-like
protein" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP008215 HOGENOM:HOG000239571 EMBL:AP005784
RefSeq:NP_001175840.1 UniGene:Os.59658
EnsemblPlants:LOC_Os09g25040.1 GeneID:9272478 KEGG:osa:9272478
OMA:SMSVLTA Uniprot:Q6EPZ6
Length = 499
Score = 117 (46.2 bits), Expect = 0.00018, P = 0.00018
Identities = 29/54 (53%), Positives = 36/54 (66%)
Query: 59 HVIAERKRREKLNQRFIALSALVPGLKK---TDKASILGDSIKYLKQLQERVKA 109
H IAER RRE++ +R AL LVP K TDKAS+L + I Y+K LQ +VKA
Sbjct: 261 HSIAERLRRERIAERMKALQELVPNANKLMQTDKASMLDEIIDYVKFLQLQVKA 314
>TAIR|locus:2032990 [details] [associations]
symbol:CES "AT1G25330" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IMP;TAS]
[GO:2000488 "positive regulation of brassinosteroid biosynthetic
process" evidence=IMP] [GO:0048441 "petal development"
evidence=RCA] [GO:0048443 "stamen development" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
eggNOG:NOG264296 EMBL:AC079374 EMBL:DQ446289 EMBL:DQ652859
EMBL:AK175757 EMBL:AY088885 EMBL:AF488607 IPI:IPI00519962
PIR:B86383 PIR:D86381 RefSeq:NP_564229.1 UniGene:At.48236
UniGene:At.63980 ProteinModelPortal:A4D998 SMR:A4D998
EnsemblPlants:AT1G25330.1 GeneID:839117 KEGG:ath:AT1G25330
GeneFarm:2907 TAIR:At1g25330 InParanoid:A4D998 PhylomeDB:A4D998
Genevestigator:A4D998 GO:GO:2000488 Uniprot:A4D998
Length = 223
Score = 111 (44.1 bits), Expect = 0.00019, P = 0.00019
Identities = 29/79 (36%), Positives = 44/79 (55%)
Query: 39 KVQEPRRVSSVIRDPSHAQD-HVIAERKRREKLNQRFIALSALVPGLKKTDKASILGDSI 97
+ Q+P+ V V A D H +AER RREK+N+R L LVPG K +++ D I
Sbjct: 94 ETQKPKDVVHVRAKRGQATDSHSLAERVRREKINERLKCLQDLVPGCYKAMGMAVMLDVI 153
Query: 98 -KYLKQLQERVKALEEQTS 115
Y++ LQ +++ L + S
Sbjct: 154 IDYVRSLQNQIEFLSMKLS 172
>UNIPROTKB|Q6YTU1 [details] [associations]
symbol:P0419H09.4 "cDNA clone:002-131-D10, full insert
sequence" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:AP004213
EMBL:AP008214 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000238962 EMBL:HQ858861 EMBL:AP005918 EMBL:AK107626
RefSeq:NP_001062077.1 UniGene:Os.55174
EnsemblPlants:LOC_Os08g37730.1 GeneID:4345867 KEGG:osa:4345867
eggNOG:NOG250596 ProtClustDB:CLSN2919896 Uniprot:Q6YTU1
Length = 363
Score = 115 (45.5 bits), Expect = 0.00019, P = 0.00019
Identities = 23/77 (29%), Positives = 48/77 (62%)
Query: 37 KKKVQEPRRVSSVIRDPSHAQDHVIAERKRREKLNQRFIALSALVPG--LKKTDKASILG 94
++K + R V + S H+ ER RR+++N+ L +L+P +++ D+ASI+G
Sbjct: 120 RRKRRRARTVKNREEVESQRMTHIAVERNRRKQMNEYLAVLRSLMPASYVQRGDQASIIG 179
Query: 95 DSIKYLKQLQERVKALE 111
+I Y+K++++ +++LE
Sbjct: 180 GAINYVKEMEQLLQSLE 196
>UNIPROTKB|Q6ZCV8 [details] [associations]
symbol:P0028A08.20 "Os08g0487700 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AP008214 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:CM000145 EMBL:AP004557 RefSeq:NP_001062102.1 UniGene:Os.60678
EnsemblPlants:LOC_Os08g38080.1 GeneID:4345892 KEGG:osa:4345892
eggNOG:NOG275480 Uniprot:Q6ZCV8
Length = 365
Score = 115 (45.5 bits), Expect = 0.00019, P = 0.00019
Identities = 34/108 (31%), Positives = 58/108 (53%)
Query: 58 DHVIAERKRREKLNQRFIALSALVPGLKK-TDKASILGDSIKYLKQLQERVKALEEQTSK 116
+H +AER RREK+++R L LVPG K T KA +L + I Y++ LQ +V+ L + S
Sbjct: 186 NHSLAERLRREKISERMKLLQDLVPGCSKVTGKALMLDEIINYVQSLQRQVEFLSMKLSA 245
Query: 117 KT------VESMIIVKKSQMIYTDDETS-PTDINFDAQSNQYLPEIEV 157
+ES++ K + + +S P +F S + +P +++
Sbjct: 246 VNPRIDLDIESLVNNSKDVLRFPGQPSSAPMGFSF---STEMMPGLQL 290
>UNIPROTKB|Q69WS3 [details] [associations]
symbol:OJ1118_E12.15 "Putative bHLH protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP003743
ProteinModelPortal:Q69WS3 Gramene:Q69WS3 Uniprot:Q69WS3
Length = 268
Score = 112 (44.5 bits), Expect = 0.00023, P = 0.00023
Identities = 24/51 (47%), Positives = 34/51 (66%)
Query: 59 HVIAERKRREKLNQRFIALSALVPGLKKT-DKASILGDSIKYLKQLQERVK 108
H +AER RREK+++R L LVPG K KAS+L + I Y++ LQ +V+
Sbjct: 139 HSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQSLQHQVE 189
>TAIR|locus:2152551 [details] [associations]
symbol:AT5G48560 "AT5G48560" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0016132 "brassinosteroid biosynthetic process" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AB015468 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238007 eggNOG:NOG283912
ProtClustDB:CLSN2684837 EMBL:AF488610 EMBL:BT002945 EMBL:BT005637
IPI:IPI00543091 RefSeq:NP_199667.1 UniGene:At.43769
ProteinModelPortal:Q9FJL4 SMR:Q9FJL4 IntAct:Q9FJL4 PaxDb:Q9FJL4
PRIDE:Q9FJL4 EnsemblPlants:AT5G48560.1 GeneID:834912
KEGG:ath:AT5G48560 TAIR:At5g48560 InParanoid:Q9FJL4 OMA:SASCYAT
PhylomeDB:Q9FJL4 Genevestigator:Q9FJL4 Uniprot:Q9FJL4
Length = 498
Score = 116 (45.9 bits), Expect = 0.00023, P = 0.00023
Identities = 44/150 (29%), Positives = 70/150 (46%)
Query: 38 KKVQEPRRVSSVIRDPSHAQD-HVIAERKRREKLNQRFIALSALVPGLKK-TDKASILGD 95
K + P+ V A D H +AER RREK+ +R L LVPG K T KA +L +
Sbjct: 290 KPPEPPKDYIHVRARRGQATDSHSLAERVRREKIGERMKLLQDLVPGCNKVTGKALMLDE 349
Query: 96 SIKYLKQLQERVKALEEQTSKKTVESMIIVKKSQMIYTDDETSPTDINFDAQSNQYLPE- 154
I Y++ LQ +V+ L + S V +++ + D D+ + +N+ E
Sbjct: 350 IINYVQSLQRQVEFLSMKLSS--------VNDTRLDFNVDALVSKDVMIPSSNNRLHEEG 401
Query: 155 IEVRVSDRDVLIRIHCEKNNNKGHLANILS 184
++ + S +++ NNN L NI S
Sbjct: 402 LQSKSSSHHHQQQLNIY-NNNSQLLPNISS 430
>UNIPROTKB|Q6ESL3 [details] [associations]
symbol:OJ1294_G06.8 "DNA binding protein-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP005093 ProteinModelPortal:Q6ESL3
EnsemblPlants:LOC_Os09g24490.1 KEGG:dosa:Os09t0410700-00
Gramene:Q6ESL3 OMA:RRHECIA Uniprot:Q6ESL3
Length = 363
Score = 114 (45.2 bits), Expect = 0.00024, P = 0.00024
Identities = 21/55 (38%), Positives = 38/55 (69%)
Query: 56 AQDHVIAERKRREKLNQRFIALSALVPGLKKTDKASILGDSIKYLKQLQERVKAL 110
++ H AER+RR+++N L +L+P KTDKAS+L + I+++K+L+ + A+
Sbjct: 107 SRSHSEAERRRRQRINGHLARLRSLLPNTTKTDKASLLAEVIEHVKELKRQTTAI 161
>UNIPROTKB|Q6Z9R3 [details] [associations]
symbol:P0461F06.33 "BHLH protein family-like" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:CM000145
eggNOG:NOG315110 EMBL:AP004693 EnsemblPlants:LOC_Os08g36740.1
OMA:SAMREMI Uniprot:Q6Z9R3
Length = 246
Score = 111 (44.1 bits), Expect = 0.00025, P = 0.00025
Identities = 28/72 (38%), Positives = 46/72 (63%)
Query: 40 VQEPRRVSSVIRDPSHAQDHVIAERKRREKLNQRFIALSALVPGLKKTDKASILGDSIKY 99
V+ P+R + +R + Q +A R RRE++++R L LVPG K D AS+L ++I Y
Sbjct: 147 VRPPKRRN--VRISTDPQS--VAARMRRERISERIRILQRLVPGGTKMDTASMLDEAIHY 202
Query: 100 LKQLQERVKALE 111
+K L+ +V++LE
Sbjct: 203 VKFLKTQVQSLE 214
>TAIR|locus:2065086 [details] [associations]
symbol:AT2G40200 "AT2G40200" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AF085279 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AF488586 EMBL:BT029997 EMBL:BT030051
IPI:IPI00547467 PIR:E84826 RefSeq:NP_181549.1 UniGene:At.37090
ProteinModelPortal:Q9XEF0 SMR:Q9XEF0 EnsemblPlants:AT2G40200.1
GeneID:818611 KEGG:ath:AT2G40200 TAIR:At2g40200 eggNOG:NOG318931
HOGENOM:HOG000095217 InParanoid:Q9XEF0 OMA:QPETISD PhylomeDB:Q9XEF0
ProtClustDB:CLSN2913057 ArrayExpress:Q9XEF0 Genevestigator:Q9XEF0
Uniprot:Q9XEF0
Length = 254
Score = 111 (44.1 bits), Expect = 0.00027, P = 0.00027
Identities = 31/102 (30%), Positives = 56/102 (54%)
Query: 46 VSSVIRDPSHAQDHVIAERKRREKLNQRFIALSALVPGLKKTDKASILGDSIKYLKQLQE 105
V + + S ++ H +AE++RR+++N AL LVP K DKA++L I+ +K+L++
Sbjct: 54 VGGIEKAESLSRSHRLAEKRRRDRINSHLTALRKLVPNSDKLDKAALLATVIEQVKELKQ 113
Query: 106 RVKALEEQTSKKT-VESMIIVKKSQMIYTDDETSPTDINFDA 146
KA E + E+ + + + I +D E++ I F A
Sbjct: 114 --KAAESPIFQDLPTEADEVTVQPETI-SDFESNTNTIIFKA 152
>TAIR|locus:2045263 [details] [associations]
symbol:AT2G31730 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0009723 "response to
ethylene stimulus" evidence=ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009739
"response to gibberellin stimulus" evidence=IEP] InterPro:IPR011598
PROSITE:PS50888 SMART:SM00353 EMBL:CP002685 GO:GO:0003700
GO:GO:0009739 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000240890 OMA:SKGLCLV EMBL:AJ576041 IPI:IPI00539360
RefSeq:NP_180732.3 UniGene:At.38180 ProteinModelPortal:Q7XJU1
SMR:Q7XJU1 DNASU:817730 EnsemblPlants:AT2G31730.1 GeneID:817730
KEGG:ath:AT2G31730 TAIR:At2g31730 InParanoid:Q7XJU1
PhylomeDB:Q7XJU1 ProtClustDB:CLSN2687695 Genevestigator:Q7XJU1
Uniprot:Q7XJU1
Length = 153
Score = 103 (41.3 bits), Expect = 0.00028, P = 0.00028
Identities = 25/71 (35%), Positives = 41/71 (57%)
Query: 56 AQDHVIAERKRREKLNQRFIALSALVPGLKKTDKASILGDSIKYLKQLQERVKALEE--- 112
+ D + ++R++KL +R AL LV KTD AS+L + ++Y++ LQE+VK L
Sbjct: 31 SSDLSFSSKERKDKLAERISALQQLVSPYGKTDTASVLLEGMQYIQFLQEQVKVLSAPYL 90
Query: 113 QTSKKTVESMI 123
Q + T E +
Sbjct: 91 QATPSTTEEEV 101
>TAIR|locus:2027809 [details] [associations]
symbol:BEE3 "AT1G73830" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000090950 ProtClustDB:CLSN2680013 EMBL:AF488585
EMBL:AC012679 EMBL:AK118781 EMBL:BT006055 IPI:IPI00541876
RefSeq:NP_177524.2 UniGene:At.34949 ProteinModelPortal:Q8GWK7
SMR:Q8GWK7 EnsemblPlants:AT1G73830.1 GeneID:843719
KEGG:ath:AT1G73830 TAIR:At1g73830 eggNOG:NOG264296
InParanoid:Q8GWK7 OMA:LENNFHQ PhylomeDB:Q8GWK7
Genevestigator:Q8GWK7 Uniprot:Q8GWK7
Length = 261
Score = 111 (44.1 bits), Expect = 0.00029, P = 0.00029
Identities = 32/78 (41%), Positives = 44/78 (56%)
Query: 36 SKKKVQEPRR-VSSVIRDPSHAQD-HVIAERKRREKLNQRFIALSALVPGLKKT-DKASI 92
SK + +E R V V A D H IAER RR K+N+R L +VPG KT A++
Sbjct: 133 SKNREEEKEREVVHVRARRGQATDSHSIAERVRRGKINERLKCLQDIVPGCYKTMGMATM 192
Query: 93 LGDSIKYLKQLQERVKAL 110
L + I Y++ LQ +V+ L
Sbjct: 193 LDEIINYVQSLQNQVEFL 210
>TAIR|locus:2204569 [details] [associations]
symbol:AT1G30670 "AT1G30670" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AC007060 EMBL:AF488587 IPI:IPI00540602 PIR:B86432
RefSeq:NP_174355.1 UniGene:At.40503 ProteinModelPortal:Q9SA82
SMR:Q9SA82 PRIDE:Q9SA82 EnsemblPlants:AT1G30670.1 GeneID:839947
KEGG:ath:AT1G30670 TAIR:At1g30670 eggNOG:NOG324437
HOGENOM:HOG000090323 InParanoid:Q9SA82 OMA:RRITEKT PhylomeDB:Q9SA82
ProtClustDB:CLSN2914140 Genevestigator:Q9SA82 Uniprot:Q9SA82
Length = 264
Score = 111 (44.1 bits), Expect = 0.00029, P = 0.00029
Identities = 24/77 (31%), Positives = 46/77 (59%)
Query: 61 IAERKRREKLNQRFIALSALVPGLKKTDKASILGDSIKYLKQLQERVKALE-EQTSKKTV 119
IA RKRR ++ ++ L L+PG +K + A + + KY+K LQ +++ L+ +QT +T+
Sbjct: 141 IAARKRRRRITEKTQELGKLIPGSQKHNTAEMFNAAAKYVKFLQAQIEILQLKQTKMQTL 200
Query: 120 ESMIIVKKSQMIYTDDE 136
+S + ++ Q + E
Sbjct: 201 DSSKVGREMQFLLGSQE 217
>UNIPROTKB|Q8H8H9 [details] [associations]
symbol:OJ1126B12.2 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
EMBL:DP000009 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC098695
EnsemblPlants:LOC_Os03g03000.1 KEGG:dosa:Os03t0122100-00
OMA:GAIDYVK Uniprot:Q8H8H9
Length = 291
Score = 111 (44.1 bits), Expect = 0.00036, P = 0.00036
Identities = 34/152 (22%), Positives = 74/152 (48%)
Query: 59 HVIAERKRREKLNQRFIALSALVPG--LKKTDKASILGDSIKYLKQLQERVKALEEQTSK 116
H+ ER RR +N +L +L+P + + D+A+++G +I Y+KQL++++ AL+ ++
Sbjct: 119 HIAVERNRRRLMNDHLASLRSLIPSNYIPRGDQATVVGGAIDYVKQLEQQLVALQAAAAE 178
Query: 117 KTVESMIIVKKSQMIYTDDE-TSPTDINFDAQSNQYLPEIEVRVSDRDVLIRIHCEKNNN 175
++ + +V + +D SP ++ ++E + +R+
Sbjct: 179 RS--GVGVVAAAATAASDGVFVSPQYTSYSEARGGSGVDVEATAAVGGH-VRVRVAGRRW 235
Query: 176 KGHLANILSEIENVHHLSVLSCNVLPFGNSTV 207
G L ++ +E++ L+VL V G+ V
Sbjct: 236 TGRLVRAVAAMEDLR-LTVLHLAVTSVGHDAV 266
>UNIPROTKB|Q84QW1 [details] [associations]
symbol:OJ1191_A10.109 "BHLH transcription
factor(GBOF-1)-like" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:AP008214
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP003888
RefSeq:NP_001062289.1 UniGene:Os.10830
EnsemblPlants:LOC_Os08g41320.1 GeneID:4346087 KEGG:osa:4346087
eggNOG:NOG320619 OMA:ERISQRM ProtClustDB:CLSN2697487 Uniprot:Q84QW1
Length = 405
Score = 113 (44.8 bits), Expect = 0.00038, P = 0.00038
Identities = 30/75 (40%), Positives = 42/75 (56%)
Query: 38 KKVQEPRRVSSVIRDPSHAQD-HVIAERKRREKLNQRFIALSALVPGLKKT-DKASILGD 95
K V+ P+ V A D H +AER RRE+++QR L LVPG K KA +L +
Sbjct: 193 KPVEPPKDYVHVRARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDE 252
Query: 96 SIKYLKQLQERVKAL 110
I Y++ LQ +V+ L
Sbjct: 253 IINYVQSLQRQVEFL 267
>TAIR|locus:2012146 [details] [associations]
symbol:RGE1 "AT1G49770" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009790 "embryo development" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0009790 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AC011807 EMBL:AF488623 IPI:IPI00539453 PIR:D96534
RefSeq:NP_175399.2 UniGene:At.38170 ProteinModelPortal:Q9FXA3
SMR:Q9FXA3 EnsemblPlants:AT1G49770.1 GeneID:841400
KEGG:ath:AT1G49770 TAIR:At1g49770 eggNOG:NOG272533
HOGENOM:HOG000272699 InParanoid:Q9FXA3 OMA:DHEIHIW PhylomeDB:Q9FXA3
ProtClustDB:CLSN2918353 Genevestigator:Q9FXA3 Uniprot:Q9FXA3
Length = 308
Score = 111 (44.1 bits), Expect = 0.00041, P = 0.00041
Identities = 24/66 (36%), Positives = 42/66 (63%)
Query: 53 PSHAQDHVIAERKRREKLNQRFIALSALVPGLK-KTDKASILGDSIKYLKQLQERVKALE 111
P H + H+ ER+RR+K+ F L AL+P L K DK++I+ +++ +K L++ ++ LE
Sbjct: 69 PDH-EIHIWTERERRKKMRDMFSKLHALLPQLPPKADKSTIVDEAVSSIKSLEQTLQKLE 127
Query: 112 EQTSKK 117
Q +K
Sbjct: 128 MQKLEK 133
>UNIPROTKB|Q8GZV6 [details] [associations]
symbol:OJ1017C11.10 "Putative uncharacterized protein
OJ1017C11.10" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR001810
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50181 PROSITE:PS50888
SMART:SM00256 SMART:SM00353 GO:GO:0005634 SUPFAM:SSF81383
Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR019955
PROSITE:PS50053 EMBL:AC135157 ProteinModelPortal:Q8GZV6
Gramene:Q8GZV6 Uniprot:Q8GZV6
Length = 776
Score = 116 (45.9 bits), Expect = 0.00043, P = 0.00043
Identities = 27/58 (46%), Positives = 37/58 (63%)
Query: 59 HVIAERKRREKLNQRFIALSALVPGLKK-TDKASILGDSIKYLKQLQERVKALEEQTS 115
H +AER RREK+N+R L LVPG K T KA +L + I Y++ LQ +V+ L + S
Sbjct: 639 HSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQVEFLSMKLS 696
>TAIR|locus:2079676 [details] [associations]
symbol:AT3G07340 "AT3G07340" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000238007 EMBL:AC009853 EMBL:AK175369 EMBL:AK175496
EMBL:AK176563 EMBL:AK176663 EMBL:BT026497 EMBL:AF488595
IPI:IPI00521004 RefSeq:NP_187390.1 UniGene:At.40357
ProteinModelPortal:Q9SRT2 SMR:Q9SRT2 EnsemblPlants:AT3G07340.1
GeneID:819922 KEGG:ath:AT3G07340 GeneFarm:2908 TAIR:At3g07340
eggNOG:NOG283912 InParanoid:Q9SRT2 OMA:MENELFM PhylomeDB:Q9SRT2
ProtClustDB:CLSN2684837 Genevestigator:Q9SRT2 Uniprot:Q9SRT2
Length = 456
Score = 113 (44.8 bits), Expect = 0.00046, P = 0.00046
Identities = 41/142 (28%), Positives = 70/142 (49%)
Query: 59 HVIAERKRREKLNQRFIALSALVPGLKK-TDKASILGDSIKYLKQLQERVKALEEQTSKK 117
H +AER RREK+++R L LVPG K T KA +L + I Y++ LQ +V+ L + S
Sbjct: 269 HSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLS-- 326
Query: 118 TVESMIIVKKSQMIYTDDETSPTDINFDAQSNQYLPEIEVRVSDRDVLIRIHCEKN---N 174
+V + + ++ D P+ N +Q + +++ S + L+ H KN N
Sbjct: 327 SVNTRLDFNMDALLSKD--IFPSSNNL--MHHQQVLQLD---SSAETLLGDHHNKNLQLN 379
Query: 175 NKGHLANILSEIENVHHLSVLS 196
N+++ +E S +S
Sbjct: 380 PDISSNNVINPLETSETRSFIS 401
>UNIPROTKB|Q8S0N2 [details] [associations]
symbol:P0692C11.41-1 "BHLH transcription factor-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP008207
EMBL:CM000138 EMBL:AP003381 EMBL:AP003273 EMBL:AK106119
RefSeq:NP_001044022.1 UniGene:Os.25546 GeneID:4327679
KEGG:osa:4327679 eggNOG:NOG254276 OMA:EPDMEAM
ProtClustDB:CLSN2919059 Uniprot:Q8S0N2
Length = 393
Score = 112 (44.5 bits), Expect = 0.00048, P = 0.00048
Identities = 30/81 (37%), Positives = 45/81 (55%)
Query: 42 EPRRVSSVIRDPSHAQDHVIAERKRREKLNQRFIALSALVPGLKKTDKASILGDSIKYLK 101
+PRR + +R S Q +A R RRE+++ R L LVPG K D AS+L ++ YLK
Sbjct: 273 KPRRKN--VRISSDPQ--TVAARLRRERVSDRLRVLQKLVPGGNKMDTASMLDEAASYLK 328
Query: 102 QLQERVKALEEQTSKKTVESM 122
L+ +V+ LE + T +
Sbjct: 329 FLKSQVQKLETLGTTTTTSKL 349
>UNIPROTKB|Q75M33 [details] [associations]
symbol:P0668H12.5 "BHLH transcription factor" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AP008211 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:CM000142 EMBL:AC084818 EMBL:AC073405 EMBL:HQ858853
EMBL:AK065864 RefSeq:NP_001054390.1 UniGene:Os.23082
EnsemblPlants:LOC_Os05g01256.1 EnsemblPlants:LOC_Os05g01256.2
GeneID:4337537 KEGG:osa:4337537 eggNOG:NOG296531 Uniprot:Q75M33
Length = 339
Score = 111 (44.1 bits), Expect = 0.00049, P = 0.00049
Identities = 25/53 (47%), Positives = 36/53 (67%)
Query: 59 HVIAERKRREKLNQRFIALSALVPGLKK-TDKASILGDSIKYLKQLQERVKAL 110
H +AER RREK+++R L +LVPG K T KA +L + I Y++ LQ +V+ L
Sbjct: 191 HSLAERVRREKISERMKMLQSLVPGCDKVTGKALMLDEIISYVQSLQNQVEFL 243
>UNIPROTKB|Q5N802 [details] [associations]
symbol:P0004D12.24 "BHLH transcription factor"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP008207 eggNOG:NOG283912 EMBL:AP003433 EMBL:HQ858864
EMBL:AK101063 RefSeq:NP_001045188.1 UniGene:Os.5763
EnsemblPlants:LOC_Os01g68700.2 GeneID:4324327 KEGG:osa:4324327
ProtClustDB:CLSN2692207 Uniprot:Q5N802
Length = 481
Score = 113 (44.8 bits), Expect = 0.00050, P = 0.00050
Identities = 31/77 (40%), Positives = 42/77 (54%)
Query: 36 SKKKVQEPRRVSSVIRDPSHAQD-HVIAERKRREKLNQRFIALSALVPGLKKT-DKASIL 93
S K + P+ V A D H +AER RREK++QR L LVPG K KA +L
Sbjct: 264 SSKPPEPPKDYIHVRARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVML 323
Query: 94 GDSIKYLKQLQERVKAL 110
+ I Y++ LQ +V+ L
Sbjct: 324 DEIINYVQSLQRQVEFL 340
>UNIPROTKB|Q6ZJC8 [details] [associations]
symbol:OJ1666_A04.16 "Os08g0477900 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AP008214 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP003917 RefSeq:NP_001062047.1 UniGene:Os.73988
EnsemblPlants:LOC_Os08g37290.1 GeneID:4345836 KEGG:osa:4345836
OMA:LLNRDEH ProtClustDB:CLSN2697408 Uniprot:Q6ZJC8
Length = 223
Score = 107 (42.7 bits), Expect = 0.00057, P = 0.00057
Identities = 19/50 (38%), Positives = 34/50 (68%)
Query: 57 QDHVIAERKRREKLNQRFIALSALVPGLKKTDKASILGDSIKYLKQLQER 106
+ H AERKRR+++N L LVP + DKA++LG+ ++++++L+ R
Sbjct: 21 RSHSEAERKRRQRINAHLATLRTLVPSASRMDKAALLGEVVRHVRELRCR 70
>TAIR|locus:2095198 [details] [associations]
symbol:AT3G23690 "AT3G23690" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
EMBL:AP000377 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238007 EMBL:AY065441 EMBL:AY096536
EMBL:EU550216 EMBL:EU550217 EMBL:EU550218 EMBL:EU550219
EMBL:EU550220 EMBL:EU550221 EMBL:EU550222 EMBL:EU550223
EMBL:EU550224 EMBL:EU550225 EMBL:EU550226 EMBL:EU550227
EMBL:EU550228 EMBL:EU550229 EMBL:EU550230 EMBL:EU550231
EMBL:EU550232 EMBL:EU550233 EMBL:EU550234 EMBL:EU550235
EMBL:EU550236 EMBL:EU550237 EMBL:EU550238 EMBL:EU550239
EMBL:AF488609 IPI:IPI00545445 RefSeq:NP_189011.2 UniGene:At.6666
ProteinModelPortal:Q9LK48 SMR:Q9LK48 PaxDb:Q9LK48 PRIDE:Q9LK48
EnsemblPlants:AT3G23690.1 GeneID:821950 KEGG:ath:AT3G23690
TAIR:At3g23690 eggNOG:NOG292697 InParanoid:Q9LK48 OMA:MEFNANA
PhylomeDB:Q9LK48 ProtClustDB:CLSN2917952 Genevestigator:Q9LK48
Uniprot:Q9LK48
Length = 371
Score = 111 (44.1 bits), Expect = 0.00057, P = 0.00057
Identities = 29/75 (38%), Positives = 42/75 (56%)
Query: 38 KKVQEPRRVSSVIRDPSHAQD-HVIAERKRREKLNQRFIALSALVPGLKK-TDKASILGD 95
K + P+ V A D H +AER RREK+++R L LVPG + T KA +L +
Sbjct: 180 KPPEAPKDYIHVRARRGQATDSHSLAERARREKISERMTLLQDLVPGCNRITGKAVMLDE 239
Query: 96 SIKYLKQLQERVKAL 110
I Y++ LQ +V+ L
Sbjct: 240 IINYVQSLQRQVEFL 254
>TAIR|locus:2139484 [details] [associations]
symbol:CIB1 "AT4G34530" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IDA]
[GO:0009911 "positive regulation of flower development"
evidence=IMP] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0009911
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL161585 EMBL:AL023094
HOGENOM:HOG000238007 EMBL:AF488596 EMBL:AK117846 EMBL:AY120741
EMBL:BT005313 IPI:IPI00519970 PIR:T05273 RefSeq:NP_195179.2
UniGene:At.48937 ProteinModelPortal:Q8GY61 SMR:Q8GY61
DIP:DIP-59356N IntAct:Q8GY61 PRIDE:Q8GY61 EnsemblPlants:AT4G34530.1
GeneID:829604 KEGG:ath:AT4G34530 TAIR:At4g34530 eggNOG:NOG251551
InParanoid:Q8GY61 OMA:SGYSHEM PhylomeDB:Q8GY61
ProtClustDB:CLSN2915063 Genevestigator:Q8GY61 Uniprot:Q8GY61
Length = 335
Score = 110 (43.8 bits), Expect = 0.00062, P = 0.00062
Identities = 25/53 (47%), Positives = 35/53 (66%)
Query: 59 HVIAERKRREKLNQRFIALSALVPGLKK-TDKASILGDSIKYLKQLQERVKAL 110
H IAER RREK+++R L LVPG K T KA +L + I Y++ LQ +++ L
Sbjct: 183 HSIAERVRREKISERMKFLQDLVPGCDKITGKAGMLDEIINYVQSLQRQIEFL 235
>UNIPROTKB|Q6K4B1 [details] [associations]
symbol:OJ1595_D08.4 "Os09g0468700 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0003677 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP008215 EMBL:CM000146 eggNOG:NOG281753 EMBL:AP005399
EMBL:AP005574 RefSeq:NP_001175879.1 UniGene:Os.98668
EnsemblPlants:LOC_Os09g29360.1 GeneID:9267272 KEGG:osa:9267272
Uniprot:Q6K4B1
Length = 351
Score = 110 (43.8 bits), Expect = 0.00068, P = 0.00068
Identities = 23/83 (27%), Positives = 49/83 (59%)
Query: 37 KKKVQEPRRVSSVIRDPSHAQDHVIAERKRREKLNQRFIALSALVPG--LKKTDKASILG 94
++K + R + S H+ ER RR+++N+ L +L+P ++ D+ASI+G
Sbjct: 114 RRKRRRARAAKNKEEVESQRMTHIAVERNRRKQMNEYLAVLRSLMPPSYAQRGDQASIVG 173
Query: 95 DSIKYLKQLQERVKALEEQTSKK 117
+I ++K+L++ +++LE + S +
Sbjct: 174 GAINFVKELEQLLQSLEARKSSR 196
>TAIR|locus:504954900 [details] [associations]
symbol:AT5G43175 "AT5G43175" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB008267 HOGENOM:HOG000240244 ProtClustDB:CLSN2688032
IPI:IPI00519888 RefSeq:NP_680385.1 UniGene:At.55333
ProteinModelPortal:Q3E7L7 SMR:Q3E7L7 EnsemblPlants:AT5G43175.1
GeneID:834335 KEGG:ath:AT5G43175 TAIR:At5g43175 eggNOG:NOG323547
InParanoid:Q3E7L7 OMA:MENEAFV PhylomeDB:Q3E7L7
Genevestigator:Q3E7L7 Uniprot:Q3E7L7
Length = 223
Score = 106 (42.4 bits), Expect = 0.00077, P = 0.00077
Identities = 27/77 (35%), Positives = 44/77 (57%)
Query: 37 KKKVQEPRRVSSVIRDPSHAQDHVIAERKRREKLNQRFIALSALVPGLKKTDKASILGDS 96
K+K + R ++S DP + RKRRE++N R L +LVP K D +++L D+
Sbjct: 129 KRKAKANRGIAS---DPQS-----LYARKRRERINDRLKTLQSLVPNGTKVDISTMLEDA 180
Query: 97 IKYLKQLQERVKALEEQ 113
+ Y+K LQ ++K L +
Sbjct: 181 VHYVKFLQLQIKLLSSE 197
>UNIPROTKB|Q6YW41 [details] [associations]
symbol:B1131G07.17 "Basic helix-loop-helix (BHLH) family
protein-like" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 HSSP:P61244 EMBL:AP005797 ProteinModelPortal:Q6YW41
Gramene:Q6YW41 HOGENOM:HOG000083084 Uniprot:Q6YW41
Length = 745
Score = 116 (45.9 bits), Expect = 0.00079, Sum P(2) = 0.00079
Identities = 24/60 (40%), Positives = 40/60 (66%)
Query: 53 PSHAQ-DHVIAERKRREKLNQRFIALSALVPGLKKTDKASILGDSIKYLKQLQERVKALE 111
P+ +Q H+I+ER+RRE+LN+ F L L+P K DKA++L +++Y+ L ++ LE
Sbjct: 508 PTSSQLHHMISERRRRERLNESFEHLRGLLPPGSKKDKATVLAKTLEYMNLLIAQISELE 567
Score = 36 (17.7 bits), Expect = 0.00079, Sum P(2) = 0.00079
Identities = 8/17 (47%), Positives = 11/17 (64%)
Query: 146 AQSNQYLPEIEVRVSDR 162
A S+ PE+ VRV+ R
Sbjct: 636 ASSSSSAPEVTVRVAVR 652
>TAIR|locus:2079102 [details] [associations]
symbol:PYE "AT3G47640" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010106 "cellular response to iron ion starvation"
evidence=IMP] [GO:0055072 "iron ion homeostasis" evidence=IMP]
InterPro:IPR011598 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0055072
EMBL:AY080786 EMBL:AY114018 EMBL:AL132955 EMBL:AF488582
IPI:IPI00539041 PIR:T45724 RefSeq:NP_001190029.1
RefSeq:NP_001190030.1 RefSeq:NP_190348.1 UniGene:At.43911
ProteinModelPortal:Q9SN74 SMR:Q9SN74 IntAct:Q9SN74 STRING:Q9SN74
PRIDE:Q9SN74 EnsemblPlants:AT3G47640.1 EnsemblPlants:AT3G47640.2
EnsemblPlants:AT3G47640.3 GeneID:823918 KEGG:ath:AT3G47640
TAIR:At3g47640 eggNOG:NOG254857 HOGENOM:HOG000070871
InParanoid:Q9SN74 OMA:QSKPDLN PhylomeDB:Q9SN74
ProtClustDB:CLSN2913351 Genevestigator:Q9SN74 GO:GO:0010106
Uniprot:Q9SN74
Length = 240
Score = 106 (42.4 bits), Expect = 0.00093, P = 0.00093
Identities = 34/130 (26%), Positives = 67/130 (51%)
Query: 32 DQFCSKKKVQEPRRVSSVIRDPSHAQDHVIAERKRREKLNQRFIALS-ALVPGLKKTDKA 90
D+ C K KV P+R++ +R ER +RE LN+ FI L+ L + + KA
Sbjct: 18 DERCRKGKV--PKRINKAVR-----------ERLKREHLNELFIELADTLELNQQNSGKA 64
Query: 91 SILGDSIKYLKQLQERVKALEEQTSKKTVESMIIVKKSQMIYTDDETSPTDIN-----FD 145
SIL ++ ++LK + ++++L ++ + ES + + + + T+I+ +
Sbjct: 65 SILCEATRFLKDVFGQIESLRKEHASLLSESSYVTTEKNELKEETSVLETEISKLQNEIE 124
Query: 146 AQSNQYLPEI 155
A++NQ P++
Sbjct: 125 ARANQSKPDL 134
>TAIR|locus:2126856 [details] [associations]
symbol:IND "AT4G00120" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010197 "polar nucleus fusion" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL161471
GO:GO:0010197 EMBL:AF069299 EMBL:BT029443 EMBL:AF488578
IPI:IPI00532644 PIR:T01340 RefSeq:NP_191923.1 UniGene:At.34598
ProteinModelPortal:O81313 SMR:O81313 IntAct:O81313 STRING:O81313
PRIDE:O81313 EnsemblPlants:AT4G00120.1 GeneID:827911
KEGG:ath:AT4G00120 TAIR:At4g00120 eggNOG:NOG274244
HOGENOM:HOG000113070 InParanoid:O81313 OMA:DWNKAND PhylomeDB:O81313
ProtClustDB:CLSN2916160 Genevestigator:O81313 Uniprot:O81313
Length = 198
Score = 104 (41.7 bits), Expect = 0.00094, P = 0.00094
Identities = 26/72 (36%), Positives = 44/72 (61%)
Query: 40 VQEPRRVSSVIRDPSHAQDHVIAERKRREKLNQRFIALSALVPGLKKTDKASILGDSIKY 99
V +P R + I D V+A R+RRE+++++ L +VPG K D AS+L ++I+Y
Sbjct: 108 VPKPNRRNVRISDDPQT---VVA-RRRRERISEKIRILKRIVPGGAKMDTASMLDEAIRY 163
Query: 100 LKQLQERVKALE 111
K L+ +V+ L+
Sbjct: 164 TKFLKRQVRILQ 175
>UNIPROTKB|Q6Z2G7 [details] [associations]
symbol:P0680A05.9 "Putative bHLH transcription factor"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP008208 eggNOG:NOG251551 EMBL:AP005323 EMBL:AK119183
RefSeq:NP_001047868.1 UniGene:Os.7751
EnsemblPlants:LOC_Os02g47660.1 GeneID:4330462 KEGG:osa:4330462
OMA:TVESLCQ ProtClustDB:CLSN2693116 Uniprot:Q6Z2G7
Length = 361
Score = 109 (43.4 bits), Expect = 0.00094, P = 0.00094
Identities = 24/53 (45%), Positives = 36/53 (67%)
Query: 59 HVIAERKRREKLNQRFIALSALVPGLKK-TDKASILGDSIKYLKQLQERVKAL 110
H +AER RRE++++R L LVPG K T KA +L + I Y++ LQ++V+ L
Sbjct: 175 HSLAERVRRERISERMRYLQELVPGCNKVTGKAGMLDEIINYVQSLQKQVEFL 227
>UNIPROTKB|Q7XLY9 [details] [associations]
symbol:OSJNBa0086O06.20 "OSJNBa0086O06.20 protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AL662981 UniGene:Os.52382 HOGENOM:HOG000238962
ProteinModelPortal:Q7XLY9 EnsemblPlants:LOC_Os04g50090.1
Gramene:Q7XLY9 OMA:RFFTYPQ Uniprot:Q7XLY9
Length = 362
Score = 109 (43.4 bits), Expect = 0.00095, P = 0.00095
Identities = 26/85 (30%), Positives = 50/85 (58%)
Query: 37 KKKVQEPRRVSSVIRDPSHAQDHVIAERKRREKLNQRFIALSALVPG--LKKTDKASILG 94
+K+ + R S S H+ ER RR ++N+ L +L+P + + D+ASI+G
Sbjct: 75 RKRRRRARSCKSREDAESQRMTHIAVERNRRRQMNEYLAVLRSLMPESYVHRGDQASIVG 134
Query: 95 DSIKYLKQLQERVKALEEQTSKKTV 119
+I ++K+L++ +++LE Q K+T+
Sbjct: 135 GAIDFVKELEQLLQSLEAQ--KRTL 157
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.315 0.130 0.352 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 238 219 0.00092 112 3 11 22 0.40 33
32 0.39 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 156
No. of states in DFA: 555 (59 KB)
Total size of DFA: 146 KB (2091 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 24.95u 0.13s 25.08t Elapsed: 00:00:01
Total cpu time: 24.96u 0.13s 25.09t Elapsed: 00:00:01
Start: Fri May 10 13:23:56 2013 End: Fri May 10 13:23:57 2013
WARNINGS ISSUED: 1