BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026436
(238 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9T072|BH025_ARATH Transcription factor bHLH25 OS=Arabidopsis thaliana GN=BHLH25 PE=2
SV=2
Length = 328
Score = 199 bits (505), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 107/195 (54%), Positives = 146/195 (74%), Gaps = 4/195 (2%)
Query: 44 RRVSSVIRDPSHAQDHVIAERKRREKLNQRFIALSALVPGLKKTDKASILGDSIKYLKQL 103
+R R+ S+AQDH+IAERKRREKL QRF+ALSALVPGLKK DKAS+LGD++K++K L
Sbjct: 138 KRAQPFSRNQSNAQDHIIAERKRREKLTQRFVALSALVPGLKKMDKASVLGDALKHIKYL 197
Query: 104 QERVKALEEQTSKKTVESMIIVKKSQMIYTDDETSPTDINFDAQSNQYLPEIEVRVSDRD 163
QERV LEEQ ++ +ESM++VKKS++I D+ S + D S+ LPEIEVR SD D
Sbjct: 198 QERVGELEEQKKERRLESMVLVKKSKLILDDNNQSFSSSCEDGFSDLDLPEIEVRFSDED 257
Query: 164 VLIRIHCEKNNNKGHLANILSEIENVHHLSVLSCNVLPFGNSTVDITVVAQMDVESDVTV 223
VLI+I CEK KGHLA I++EIE +H L + + +VL FG T+DIT++A+ + + D+T+
Sbjct: 258 VLIKILCEK--QKGHLAKIMAEIEKLHIL-ITNSSVLNFG-PTLDITIIAKKESDFDMTL 313
Query: 224 KDLVKNLQPALRKFM 238
D+VK+L+ AL F+
Sbjct: 314 MDVVKSLRSALSNFI 328
>sp|Q1PF16|BH019_ARATH Transcription factor bHLH19 OS=Arabidopsis thaliana GN=BHLH19 PE=2
SV=1
Length = 295
Score = 174 bits (440), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 99/190 (52%), Positives = 141/190 (74%), Gaps = 13/190 (6%)
Query: 51 RDPSHAQDHVIAERKRREKLNQRFIALSALVPGLKKTDKASILGDSIKYLKQLQERVKAL 110
R P A++HV+AERKRREKL+++FIALSAL+PGLKK DK +IL D+I +KQLQE+++ L
Sbjct: 112 RSPVLAKEHVLAERKRREKLSEKFIALSALLPGLKKADKVTILDDAISRMKQLQEQLRTL 171
Query: 111 -EEQTSKKTVESMIIVKKSQMIYTDD---ETSPT-DINFDAQSNQYLPEIEVRVSDRDVL 165
EE+ + + +ESMI+VKKS++ + ++ SP+ I FD Q LPEIE ++S D+L
Sbjct: 172 KEEKEATRQMESMILVKKSKVFFDEEPNLSCSPSVHIEFD----QALPEIEAKISQNDIL 227
Query: 166 IRIHCEKNNNKGHLANILSEIENVHHLSVLSCNVLPFGNSTVDITVVAQMDVESDVTV-K 224
IRI CEK +KG + NIL+ IEN L + + VLPFG+ST+DITV+AQMD + +++ K
Sbjct: 228 IRILCEK--SKGCMINILNTIENF-QLRIENSIVLPFGDSTLDITVLAQMDKDFSMSILK 284
Query: 225 DLVKNLQPAL 234
DLV+NL+ A+
Sbjct: 285 DLVRNLRLAM 294
>sp|Q1PF17|BH018_ARATH Transcription factor bHLH18 OS=Arabidopsis thaliana GN=BHLH18 PE=2
SV=1
Length = 305
Score = 172 bits (435), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 103/202 (50%), Positives = 142/202 (70%), Gaps = 9/202 (4%)
Query: 40 VQEPRRVSSVIRDPSHAQDHVIAERKRREKLNQRFIALSALVPGLKKTDKASILGDSIKY 99
++ +R S+ R S+AQDH++AERKRREKL QRF+ALSAL+PGLKK DKAS+LGD+IK+
Sbjct: 108 IRGTKRAQSLTRSQSNAQDHILAERKRREKLTQRFVALSALIPGLKKMDKASVLGDAIKH 167
Query: 100 LKQLQERVKALEEQTSKKTVESMIIVKKSQMIYTDDETSP----TDINFDAQSNQYLPEI 155
+K LQE VK EEQ +KT+ES+++VKKS ++ D+ P + S+ LPEI
Sbjct: 168 IKYLQESVKEYEEQKKEKTMESVVLVKKSSLVL-DENHQPSSSSSSDGNRNSSSSNLPEI 226
Query: 156 EVRVSDRDVLIRIHCEKNNNKGHLANILSEIENVHHLSVLSCNVLPFGNSTVDITVVAQM 215
EVRVS +DVLI+I CEK KG++ I+ EIE + LS+ + NVLPFG T DI+++AQ
Sbjct: 227 EVRVSGKDVLIKILCEK--QKGNVIKIMGEIEKL-GLSITNSNVLPFG-PTFDISIIAQK 282
Query: 216 DVESDVTVKDLVKNLQPALRKF 237
+ D+ ++D+VKNL L K
Sbjct: 283 NNNFDMKIEDVVKNLSFGLSKL 304
>sp|Q8S3F1|BH020_ARATH Transcription factor NAI1 OS=Arabidopsis thaliana GN=NAI1 PE=2 SV=1
Length = 320
Score = 167 bits (422), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 100/197 (50%), Positives = 137/197 (69%), Gaps = 16/197 (8%)
Query: 51 RDPSHAQDHVIAERKRREKLNQRFIALSALVPGLKKTDKASILGDSIKYLKQLQERVKAL 110
R+P ++HV+AERKRR+KLN+R IALSAL+PGLKKTDKA++L D+IK+LKQLQERVK L
Sbjct: 125 REPHLLKEHVLAERKRRQKLNERLIALSALLPGLKKTDKATVLEDAIKHLKQLQERVKKL 184
Query: 111 EEQ--TSKKTVESMIIVKKSQMIYTDDETSPTDINFDAQS-----------NQYLPEIEV 157
EE+ +KK +S+I+VK+SQ+ DD +S + A Q +P IE
Sbjct: 185 EEERVVTKKMDQSIILVKRSQVYLDDDSSSYSSTCSAASPLSSSSDEVSIFKQTMPMIEA 244
Query: 158 RVSDRDVLIRIHCEKNNNKGHLANILSEIENVHHLSVLSCNVLPFGNSTVDITVVAQMDV 217
RVSDRD+LIR+HCEK NKG + ILS +E L V++ LPFGNST+ IT++ +MD
Sbjct: 245 RVSDRDLLIRVHCEK--NKGCMIKILSSLEK-FRLEVVNSFTLPFGNSTLVITILTKMDN 301
Query: 218 ESDVTVKDLVKNLQPAL 234
+ V+++VKN++ AL
Sbjct: 302 KFSRPVEEVVKNIRVAL 318
>sp|Q9FIP9|ATR2_ARATH Transcription factor ATR2 OS=Arabidopsis thaliana GN=ATR2 PE=1 SV=1
Length = 592
Score = 82.8 bits (203), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 98/177 (55%), Gaps = 11/177 (6%)
Query: 41 QEPRRVSSVIRDPSHAQD----HVIAERKRREKLNQRFIALSALVPGLKKTDKASILGDS 96
++PR+ R P++ ++ HV AER+RREKLNQRF +L A+VP + K DKAS+LGD+
Sbjct: 397 KKPRKRG---RKPANGREEPLNHVEAERQRREKLNQRFYSLRAVVPNVSKMDKASLLGDA 453
Query: 97 IKYLKQLQERVKALE--EQTSKKTVESMIIVKKSQMIYTDDETSPTDINFDAQSNQYLPE 154
I Y+ +L+ +++ E ++ +K ++ M + N D+ ++ E
Sbjct: 454 ISYINELKSKLQQAESDKEEIQKKLDGMSKEGNNGKGCGSRAKERKSSNQDSTASSIEME 513
Query: 155 IEVRVSDRDVLIRIHCEKNNNKG-HLANILSEIE-NVHHLSVLSCNVLPFGNSTVDI 209
I+V++ DV+IR+ C K ++ G L E++ V+H S+ N L +TV +
Sbjct: 514 IDVKIIGWDVMIRVQCGKKDHPGARFMEALKELDLEVNHASLSVVNDLMIQQATVKM 570
>sp|O49687|BH004_ARATH Transcription factor MYC4 OS=Arabidopsis thaliana GN=BHLH4 PE=2
SV=1
Length = 589
Score = 82.8 bits (203), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/177 (34%), Positives = 100/177 (56%), Gaps = 15/177 (8%)
Query: 41 QEPRRVSSVIRDPSHAQD----HVIAERKRREKLNQRFIALSALVPGLKKTDKASILGDS 96
++PR+ R P++ ++ HV AER+RREKLNQRF +L A+VP + K DKAS+LGD+
Sbjct: 398 KKPRKRG---RKPANGREEPLNHVEAERQRREKLNQRFYSLRAVVPNVSKMDKASLLGDA 454
Query: 97 IKYLKQLQERVKALEEQTSKKTVESMIIVKKSQMIYTDDETSPTDINFDAQSNQYLPEIE 156
I Y+ +L+ +++ E + K+ ++ I V + + ++S D Q + L E+E
Sbjct: 455 ISYISELKSKLQKAE--SDKEELQKQIDVMNKEA--GNAKSSVKDRKCLNQESSVLIEME 510
Query: 157 --VRVSDRDVLIRIHCEKNNNKG-HLANILSEIE-NVHHLSVLSCNVLPFGNSTVDI 209
V++ D +IRI C K N+ G L E++ V+H S+ N L +TV +
Sbjct: 511 VDVKIIGWDAMIRIQCSKRNHPGAKFMEALKELDLEVNHASLSVVNDLMIQQATVKM 567
>sp|Q39204|RAP1_ARATH Transcription factor MYC2 OS=Arabidopsis thaliana GN=RAP1 PE=1 SV=2
Length = 623
Score = 82.0 bits (201), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 101/179 (56%), Gaps = 9/179 (5%)
Query: 38 KKVQEPRRVSSVIRDPSHAQD----HVIAERKRREKLNQRFIALSALVPGLKKTDKASIL 93
K+V +R R P++ ++ HV AER+RREKLNQRF AL A+VP + K DKAS+L
Sbjct: 428 KEVAVEKRPKKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLL 487
Query: 94 GDSIKYLKQLQERVKALEEQTSKKTVESMIIVKKSQMIYTDDETSPTDINFDAQSNQYLP 153
GD+I Y+ +L+ +V ++ ++ K +++ + K ++ S D++ S + +
Sbjct: 488 GDAIAYINELKSKV--VKTESEKLQIKNQLEEVKLELAGRKASASGGDMSSSCSSIKPVG 545
Query: 154 -EIEVRVSDRDVLIRIHCEKNNN-KGHLANILSEIE-NVHHLSVLSCNVLPFGNSTVDI 209
EIEV++ D +IR+ K N+ L + L ++E V+H S+ N L +TV +
Sbjct: 546 MEIEVKIIGWDAMIRVESSKRNHPAARLMSALMDLELEVNHASMSVVNDLMIQQATVKM 604
>sp|P13027|ARRS_MAIZE Anthocyanin regulatory R-S protein OS=Zea mays GN=R-S PE=2 SV=1
Length = 612
Score = 82.0 bits (201), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 88/166 (53%), Gaps = 30/166 (18%)
Query: 54 SHAQDHVIAERKRREKLNQRFIALSALVPGLKKTDKASILGDSIKYLKQLQERVKALE-- 111
S ++HV++ERKRREKLN+ F+ L +L+P + + +KASIL ++I YLK+LQ RV+ LE
Sbjct: 414 SATKNHVMSERKRREKLNEMFLVLKSLLPSIHRVNKASILAETIAYLKELQRRVQELESS 473
Query: 112 -EQTSKKTVESMIIV--------------------KKSQMIYTDDETSPTDINFDAQSNQ 150
E S+ + + ++ +KS + DD P + DA S+
Sbjct: 474 REPASRPSETTTRLITRPSRGNNESVRKEVCAGSKRKSPELGRDDVERPPVLTMDAGSSN 533
Query: 151 YLPEIEVRVSDRDVLIRIHCEKNNNKGHLANILSEIENVHHLSVLS 196
+ V VSD+DVL+ + C + + I+++ HL VLS
Sbjct: 534 ----VTVTVSDKDVLLEVQCRWEEL--LMTRVFDAIKSL-HLDVLS 572
>sp|Q9ZPY8|AIB_ARATH Transcription factor ABA-INDUCIBLE bHLH-TYPE OS=Arabidopsis
thaliana GN=AIB PE=2 SV=2
Length = 566
Score = 81.6 bits (200), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 75/126 (59%), Gaps = 32/126 (25%)
Query: 51 RDPSHAQD----HVIAERKRREKLNQRFIALSALVPGLKKTDKASILGDSIKYLKQLQER 106
R P++ ++ HV AER+RREKLNQRF AL ++VP + K DKAS+LGD+I Y+K+LQE+
Sbjct: 384 RKPANGREEPLNHVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAISYIKELQEK 443
Query: 107 VKALEEQ---TSKKTVES-MIIVKKSQMIYTDDETSPTDINFDAQSNQYLPEIEVRVSDR 162
VK +E++ T K ES I V++S PE++++ +
Sbjct: 444 VKIMEDERVGTDKSLSESNTITVEES------------------------PEVDIQAMNE 479
Query: 163 DVLIRI 168
+V++R+
Sbjct: 480 EVVVRV 485
>sp|P13526|ARLC_MAIZE Anthocyanin regulatory Lc protein OS=Zea mays GN=LC PE=2 SV=1
Length = 610
Score = 80.1 bits (196), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 87/163 (53%), Gaps = 30/163 (18%)
Query: 57 QDHVIAERKRREKLNQRFIALSALVPGLKKTDKASILGDSIKYLKQLQERVKALE---EQ 113
++HV++ERKRREKLN+ F+ L +L+P + + +KASIL ++I YLK+LQ RV+ LE E
Sbjct: 415 KNHVMSERKRREKLNEMFLVLKSLLPSIHRVNKASILAETIAYLKELQRRVQELESSREP 474
Query: 114 TSKKTVESMIIV--------------------KKSQMIYTDDETSPTDINFDAQSNQYLP 153
S+ + + ++ +KS + DD P + DA ++
Sbjct: 475 ASRPSETTTRLITRPSRGNNESVRKEVCAGSKRKSPELGRDDVERPPVLTMDAGTSN--- 531
Query: 154 EIEVRVSDRDVLIRIHCEKNNNKGHLANILSEIENVHHLSVLS 196
+ V VSD+DVL+ + C + + I+++ HL VLS
Sbjct: 532 -VTVTVSDKDVLLEVQCRWEEL--LMTRVFDAIKSL-HLDVLS 570
>sp|Q9LNJ5|BH013_ARATH Transcription factor bHLH13 OS=Arabidopsis thaliana GN=BHLH13 PE=2
SV=1
Length = 590
Score = 76.3 bits (186), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 67/117 (57%), Gaps = 24/117 (20%)
Query: 54 SHAQDHVIAERKRREKLNQRFIALSALVPGLKKTDKASILGDSIKYLKQLQERVKALEEQ 113
+ A +HV AER+RREKLNQRF AL ++VP + K DKAS+LGD++ Y+ +L ++K +E
Sbjct: 429 AEALNHVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAVSYINELHAKLKVME-- 486
Query: 114 TSKKTVESMIIVKKSQMIYTDDETSPTDINFDAQSNQYLPEIEVRVSDRDVLIRIHC 170
++ ++ Y+ + P ++ D I V+ S DV +RI+C
Sbjct: 487 -----------AERERLGYSSN--PPISLDSD---------INVQTSGEDVTVRINC 521
>sp|Q9FT81|TT8_ARATH Transcription factor TT8 OS=Arabidopsis thaliana GN=TT8 PE=1 SV=2
Length = 518
Score = 74.7 bits (182), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/137 (37%), Positives = 71/137 (51%), Gaps = 32/137 (23%)
Query: 51 RDPSHAQDHVIAERKRREKLNQRFIALSALVPGLKKTDKASILGDSIKYLKQLQERVKAL 110
R P HV+AER+RREKLN++FI L ++VP + K DK SILGD+I Y+ L++RV L
Sbjct: 356 RLPREDLSHVVAERRRREKLNEKFITLRSMVPFVTKMDKVSILGDTIAYVNHLRKRVHEL 415
Query: 111 E----EQTSKKTVESMIIVKKSQMIYTDDETSPTDINFDAQSNQYLPEIEVRVSDRDVLI 166
E EQ K+T K S+ E+EV + + DVL+
Sbjct: 416 ENTHHEQQHKRT--RTCKRKTSE------------------------EVEVSIIENDVLL 449
Query: 167 RIHCEKNNNKGHLANIL 183
+ CE + G L +IL
Sbjct: 450 EMRCEYRD--GLLLDIL 464
>sp|Q9CAD0|EGL1_ARATH Transcription factor EGL1 OS=Arabidopsis thaliana GN=BHLH2 PE=1
SV=1
Length = 596
Score = 72.8 bits (177), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 50/75 (66%)
Query: 53 PSHAQDHVIAERKRREKLNQRFIALSALVPGLKKTDKASILGDSIKYLKQLQERVKALEE 112
P +H ++E+KRREKLN+RF+ L +++P + K DK SIL D+I+YL+ LQ+RV+ LE
Sbjct: 400 PEETGNHALSEKKRREKLNERFMTLRSIIPSISKIDKVSILDDTIEYLQDLQKRVQELES 459
Query: 113 QTSKKTVESMIIVKK 127
E+ I + K
Sbjct: 460 CRESADTETRITMMK 474
>sp|Q9LUK7|BH028_ARATH Transcription factor bHLH28 OS=Arabidopsis thaliana GN=BHLH28 PE=2
SV=1
Length = 511
Score = 72.4 bits (176), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 88/149 (59%), Gaps = 12/149 (8%)
Query: 53 PSHAQD----HVIAERKRREKLNQRFIALSALVPGLKKTDKASILGDSIKYLKQLQERVK 108
P+H +D HV AER RREKLN RF AL A+VP + K DK S+L D++ Y+ +L+ + +
Sbjct: 334 PAHGRDKPLNHVEAERMRREKLNHRFYALRAVVPNVSKMDKTSLLEDAVCYINELKSKAE 393
Query: 109 ALEEQTSKKTVESMIIVKKSQMIYTDDETSPTDINFDAQSNQYLPEIEVRVSDR-DVLIR 167
+E + K +E I + + I P+ ++ ++++ + +IEV++ + D ++R
Sbjct: 394 NVELE--KHAIE--IQFNELKEIAGQRNAIPSVCKYEEKASEMM-KIEVKIMESDDAMVR 448
Query: 168 IHCEKNNNKG-HLANILSEIE-NVHHLSV 194
+ K+++ G L N L ++E V+H S+
Sbjct: 449 VESRKDHHPGARLMNALMDLELEVNHASI 477
>sp|O23090|BH014_ARATH Transcription factor bHLH14 OS=Arabidopsis thaliana GN=BHLH14 PE=2
SV=1
Length = 423
Score = 72.0 bits (175), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 97/198 (48%), Gaps = 42/198 (21%)
Query: 3 SSPAPTVAGSSFHGNINSSSSLISQGSYLDQFCSKKKVQ---EPRRVSSVIRDPSHAQ-- 57
S P P V+ S GN QF S++K + E RV++ ++ H
Sbjct: 203 SYPKPAVSDHSKSGN--------------QQFGSERKRRRKLETTRVAAATKEKHHPAVL 248
Query: 58 DHVIAERKRREKLNQRFIALSALVPGLKKTDKASILGDSIKYLKQLQERVKALEEQTSKK 117
HV AE++RREKLN RF AL A+VP + + DKAS+L D++ Y++ L+ ++ LE +
Sbjct: 249 SHVEAEKQRREKLNHRFYALRAIVPKVSRMDKASLLSDAVSYIESLKSKIDDLETE---- 304
Query: 118 TVESMIIVKKSQMIYTDD----ETSPTDINFDAQSNQYLPEIEVRVSDRDVLIRIHCEKN 173
+KK +M TD ++ + + + Q NQ P R SD +V ++I
Sbjct: 305 -------IKKMKMTETDKLDNSSSNTSPSSVEYQVNQK-PSKSNRGSDLEVQVKI----- 351
Query: 174 NNKGHLANILSEIENVHH 191
G A I + ENV+H
Sbjct: 352 --VGEEAIIRVQTENVNH 367
>sp|O23487|BH003_ARATH Transcription factor bHLH3 OS=Arabidopsis thaliana GN=BHLH3 PE=2
SV=1
Length = 467
Score = 71.6 bits (174), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 72/135 (53%), Gaps = 34/135 (25%)
Query: 41 QEPRRVSSVIRDPSHAQD----HVIAERKRREKLNQRFIALSALVPGLKKTDKASILGDS 96
Q+PR+ R P++ ++ HV AER+RREKLNQRF AL A+VP + K DKAS+L D+
Sbjct: 302 QKPRKRG---RKPANGREEALNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLADA 358
Query: 97 IKYLKQLQERVKALEEQTSKKTVESMIIVKKSQMIYTDDETSPTDINFDAQSNQYLP-EI 155
I Y+ +Q++++ E E I+ ++ +SNQ P E+
Sbjct: 359 ITYITDMQKKIRVYE-------TEKQIMKRR-------------------ESNQITPAEV 392
Query: 156 EVRVSDRDVLIRIHC 170
+ + D ++R+ C
Sbjct: 393 DYQQRHDDAVVRLSC 407
>sp|Q9FN69|GL3_ARATH Transcription factor GLABRA 3 OS=Arabidopsis thaliana GN=GL3 PE=1
SV=1
Length = 637
Score = 69.7 bits (169), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 51/73 (69%), Gaps = 3/73 (4%)
Query: 58 DHVIAERKRREKLNQRFIALSALVPGLKKTDKASILGDSIKYLKQLQERVKALE---EQT 114
+H + E+KRREKLN+RF+ L ++P + K DK SIL D+I+YL++L+ RV+ LE E T
Sbjct: 441 NHAVLEKKRREKLNERFMTLRKIIPSINKIDKVSILDDTIEYLQELERRVQELESCREST 500
Query: 115 SKKTVESMIIVKK 127
+T +M + +K
Sbjct: 501 DTETRGTMTMKRK 513
>sp|Q9LPW3|SCRM2_ARATH Transcription factor SCREAM2 OS=Arabidopsis thaliana GN=SCRM2 PE=1
SV=1
Length = 450
Score = 67.8 bits (164), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 84/171 (49%), Gaps = 15/171 (8%)
Query: 59 HVIAERKRREKLNQRFIALSALVPGLKKTDKASILGDSIKYLKQLQERVKALEEQ----- 113
+++AER+RR+KLN R L ++VP + K D+ASILGD+I YLK+L +R+ L +
Sbjct: 268 NLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHTELESTP 327
Query: 114 TSKKTVESMIIVKKSQMIYTDDETSPTDINFDAQSNQYLPEIEVRVSDRDVLIRIHCEKN 173
S ++ + ++ +E P+ + Q P +EVR+ + + IH
Sbjct: 328 PSSSSLHPLTPTPQTLSYRVKEELCPSSSLPSPKGQQ--PRVEVRLREGKA-VNIHMFCG 384
Query: 174 NNKGHLANILSEIENVH---HLSVLSCNVLPFGNSTVDITVVAQMDVESDV 221
G L + + ++N+ +V+SC F +D+ Q + DV
Sbjct: 385 RRPGLLLSTMRALDNLGLDVQQAVISC----FNGFALDVFRAEQCQEDHDV 431
>sp|Q9ZVX2|AMS_ARATH Transcription factor ABORTED MICROSPORES OS=Arabidopsis thaliana
GN=AMS PE=1 SV=2
Length = 571
Score = 66.2 bits (160), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 45/60 (75%)
Query: 59 HVIAERKRREKLNQRFIALSALVPGLKKTDKASILGDSIKYLKQLQERVKALEEQTSKKT 118
+++AER+RR+KLN R AL +LVP + K D+ASILGD+I Y+K+LQ K L+++ + +
Sbjct: 315 NLMAERRRRKKLNDRLYALRSLVPRITKLDRASILGDAINYVKELQNEAKELQDELEENS 374
>sp|Q2HIV9|BH035_ARATH Transcription factor bHLH35 OS=Arabidopsis thaliana GN=BHLH35 PE=2
SV=1
Length = 248
Score = 64.7 bits (156), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 86/163 (52%), Gaps = 20/163 (12%)
Query: 54 SHAQDHVIAERKRREKLNQRFIALSALVPGLKKTDKASILGDSIKYLKQLQERVKALEEQ 113
S A ++++ER RR+KLNQR AL ++VP + K DKASI+ D+I Y++ LQ K LE +
Sbjct: 51 SPASKNIVSERNRRQKLNQRLFALRSVVPNITKMDKASIIKDAISYIEGLQYEEKKLEAE 110
Query: 114 TSKKTVESMIIVKKSQMIYTDDE--------TSPTDINFDAQSNQYLPEI-EVRVS---D 161
+ +ES KS + ++ D TS D+ S+ L E+ E++V+ +
Sbjct: 111 I--RELES---TPKSSLSFSKDFDRDLLVPVTSKKMKQLDSGSSTSLIEVLELKVTFMGE 165
Query: 162 RDVLIRIHCEKNNNKGHLANILSEIENVHHLSVLSCNVLPFGN 204
R +++ + C N + L E+ +L +L+ N+ F
Sbjct: 166 RTMVVSVTC---NKRTDTMVKLCEVFESLNLKILTSNLTSFSG 205
>sp|Q700E3|BH027_ARATH Transcription factor bHLH27 OS=Arabidopsis thaliana GN=BHLH27 PE=2
SV=1
Length = 263
Score = 62.0 bits (149), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 42/55 (76%)
Query: 59 HVIAERKRREKLNQRFIALSALVPGLKKTDKASILGDSIKYLKQLQERVKALEEQ 113
+V++ER RR+KLNQR AL ++VP + K DKAS++ DSI Y+++L ++ K LE +
Sbjct: 55 NVVSERNRRQKLNQRLFALRSVVPNISKLDKASVIKDSIDYMQELIDQEKTLEAE 109
>sp|Q9FHA2|ALC_ARATH Transcription factor ALC OS=Arabidopsis thaliana GN=ALC PE=2 SV=1
Length = 210
Score = 61.6 bits (148), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 66/104 (63%), Gaps = 6/104 (5%)
Query: 7 PTVAGSSFHGNINSSSSLISQGSYLDQFCSKKKVQEPRRVSSVIRDPSHAQDHVIAERKR 66
P+V+G G ++S +S+ D++ + K ++ +S+ R+ AQ H ++E+KR
Sbjct: 52 PSVSG----GAVSSVGYGVSETGQ-DKYAFEHKRSGAKQRNSLKRN-IDAQFHNLSEKKR 105
Query: 67 REKLNQRFIALSALVPGLKKTDKASILGDSIKYLKQLQERVKAL 110
R K+N++ AL L+P KTDKAS+L ++I+YLKQLQ +V+ L
Sbjct: 106 RSKINEKMKALQKLIPNSNKTDKASMLDEAIEYLKQLQLQVQTL 149
>sp|Q9LSE2|ICE1_ARATH Transcription factor ICE1 OS=Arabidopsis thaliana GN=SCRM PE=1 SV=1
Length = 494
Score = 60.8 bits (146), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 41/55 (74%)
Query: 59 HVIAERKRREKLNQRFIALSALVPGLKKTDKASILGDSIKYLKQLQERVKALEEQ 113
+++AER+RR+KLN R L ++VP + K D+ASILGD+I YLK+L +R+ L +
Sbjct: 308 NLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNE 362
>sp|Q8GZ38|UNE10_ARATH Transcription factor UNE10 OS=Arabidopsis thaliana GN=UNE10 PE=2
SV=1
Length = 399
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 37/52 (71%)
Query: 59 HVIAERKRREKLNQRFIALSALVPGLKKTDKASILGDSIKYLKQLQERVKAL 110
H +ERKRR+K+NQR L LVP KTDKAS+L + I+YLKQLQ +V +
Sbjct: 218 HNQSERKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQVSMM 269
>sp|P0CB25|BH131_ARATH Transcription factor bHLH131 OS=Arabidopsis thaliana GN=BHLH131
PE=2 SV=1
Length = 256
Score = 58.9 bits (141), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 56/101 (55%), Gaps = 11/101 (10%)
Query: 8 TVAGSSFHGNINSSSSLISQGSYLDQFCSKKKVQEPRRVSSVIRDPSHAQDHVIAERKRR 67
T G SF +SS L S+G + + SK + +E A+ H AER+RR
Sbjct: 56 TTMGRSFFAGAATSSKLFSRGFSVTKPKSKTESKEV-----------AAKKHSDAERRRR 104
Query: 68 EKLNQRFIALSALVPGLKKTDKASILGDSIKYLKQLQERVK 108
++N +F L ++P L K DKAS+LG++++Y +L++ V+
Sbjct: 105 LRINSQFATLRTILPNLVKQDKASVLGETVRYFNELKKMVQ 145
>sp|Q56YJ8|FAMA_ARATH Transcription factor FAMA OS=Arabidopsis thaliana GN=FMA PE=1 SV=1
Length = 414
Score = 58.5 bits (140), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 114/227 (50%), Gaps = 39/227 (17%)
Query: 36 SKKKVQEPRRVSSVIRDP----SHAQDHVIAERKRREKLNQRFIALSALVPG--LKKTDK 89
+KK+V+ R+ + + S H+ ER RR+++N+ L +L+PG +++ D+
Sbjct: 172 TKKEVKSKRKRARTSKTSEEVESQRMTHIAVERNRRKQMNEHLRVLRSLMPGSYVQRGDQ 231
Query: 90 ASILGDSIKYLKQLQERVKALEEQTSKKTV----------------ESMIIVKKSQ-MIY 132
ASI+G +I+++++L++ ++ LE Q ++ + + ++Q +I
Sbjct: 232 ASIIGGAIEFVRELEQLLQCLESQKRRRILGETGRDMTTTTTSSSSPITTVANQAQPLII 291
Query: 133 TDDETSPTDINF----DAQSNQYLPEIEVRVSDRDVLIRIHCEKNNNKGHLANILSEIEN 188
T + T A++ L ++EV++ D +I+I + G L ++ +E+
Sbjct: 292 TGNVTELEGGGGLREETAENKSCLADVEVKLLGFDAMIKILSRR--RPGQLIKTIAALED 349
Query: 189 VHHLSVLSCNVLPFGNSTVDITVVAQMDV----ESDVTVKDLVKNLQ 231
+ HLS+L N+ +T++ TV+ +V E+ T +D+ ++Q
Sbjct: 350 L-HLSILHTNI-----TTMEQTVLYSFNVKITSETRFTAEDIASSIQ 390
>sp|Q9FUA4|SPT_ARATH Transcription factor SPATULA OS=Arabidopsis thaliana GN=SPT PE=1
SV=1
Length = 373
Score = 58.2 bits (139), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 43/55 (78%)
Query: 56 AQDHVIAERKRREKLNQRFIALSALVPGLKKTDKASILGDSIKYLKQLQERVKAL 110
A+ H ++E++RR ++N++ AL +L+P KTDKAS+L ++I+YLKQLQ +V+ L
Sbjct: 199 AEVHNLSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQML 253
>sp|Q8L467|BH104_ARATH Transcription factor bHLH104 OS=Arabidopsis thaliana GN=BHLH104
PE=2 SV=1
Length = 283
Score = 57.8 bits (138), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 64/114 (56%), Gaps = 13/114 (11%)
Query: 18 INSSSS---LISQGSYLDQFCSKKKVQEPRRVSSVIRDPSHAQDHVIAERKRREKLNQRF 74
INS SS + + +LD CS+K+ R S R ER RREKLN+RF
Sbjct: 98 INSGSSGGAVKEEQEHLDDDCSRKRA----RTGSCSR---GGGTKACRERLRREKLNERF 150
Query: 75 IALSA-LVPG-LKKTDKASILGDSIKYLKQLQERVKALEEQTSKKTVESMIIVK 126
+ LS+ L PG KTDK +IL D+I+ L QL++ LEE T++K +E + +K
Sbjct: 151 MDLSSVLEPGRTPKTDKPAILDDAIRILNQLRDEALKLEE-TNQKLLEEIKSLK 203
>sp|Q700E4|BH067_ARATH Transcription factor bHLH67 OS=Arabidopsis thaliana GN=BHLH67 PE=2
SV=1
Length = 358
Score = 57.0 bits (136), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 90/170 (52%), Gaps = 7/170 (4%)
Query: 58 DHVIAERKRREKLNQRFIALSALVPG--LKKTDKASILGDSIKYLKQLQERVKALEEQTS 115
+H+ ER RR ++N+ +L AL+P +++ D+ASI+G +I Y+K L++ +++LE Q
Sbjct: 179 NHIAVERNRRRQMNEHINSLRALLPPSYIQRGDQASIVGGAINYVKVLEQIIQSLESQKR 238
Query: 116 KKTVESMIIVKKSQMIYTDDETSPTDINFDAQSNQYLPEIEVRVSDRDVLIRIHCEKNNN 175
+ + +V+ + + S D+ + +P+IE V V +++ CEK
Sbjct: 239 TQQQSNSEVVENA--LNHLSGISSNDLWTTLEDQTCIPKIEATVIQNHVSLKVQCEK--K 294
Query: 176 KGHLANILSEIENVHHLSVLSCNVLPFGNSTVDITVVAQMDVESDVTVKD 225
+G L + +E + L+VL N+ +S+V + +M+ E D+ D
Sbjct: 295 QGQLLKGIISLEKL-KLTVLHLNITTSSHSSVSYSFNLKMEDECDLESAD 343
>sp|Q8GZM7|PIF1_ARATH Transcription factor PIF1 OS=Arabidopsis thaliana GN=PIF1 PE=1 SV=1
Length = 478
Score = 56.6 bits (135), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 42/55 (76%)
Query: 56 AQDHVIAERKRREKLNQRFIALSALVPGLKKTDKASILGDSIKYLKQLQERVKAL 110
A+ H ++ERKRR+++N+R AL L+P K+DKAS+L ++I+Y+K LQ +++ +
Sbjct: 286 AEVHNLSERKRRDRINERMKALQELIPRCNKSDKASMLDEAIEYMKSLQLQIQMM 340
>sp|Q9M8K6|MUTE_ARATH Transcription factor MUTE OS=Arabidopsis thaliana GN=MUTE PE=2 SV=1
Length = 202
Score = 55.8 bits (133), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 98/199 (49%), Gaps = 30/199 (15%)
Query: 58 DHVIAERKRREKLNQRFIALSALVPG--LKKTDKASILGDSIKYLKQLQERVKALEEQTS 115
H+ ER RR ++N+ +L +L P +K+ D+ASI+G I+++K+LQ+ V+ LE +
Sbjct: 2 SHIAVERNRRRQMNEHLKSLRSLTPCFYIKRGDQASIIGGVIEFIKELQQLVQVLESKKR 61
Query: 116 KKTVE-------------SMIIVKKSQMIYTDDETSPTDINF---DAQSNQYLPEIEVRV 159
+KT+ S + +++ ++ E T F A N +E ++
Sbjct: 62 RKTLNRPSFPYDHQTIEPSSLGAATTRVPFSRIENVMTTSTFKEVGACCNSPHANVEAKI 121
Query: 160 SDRDVLIRIHCEKNNNKGHLANILSEIENVHHLSVLSCNVLPFGNSTVDITV----VAQM 215
S +V++R+ + G L I+S +E LS VL S+++ TV V ++
Sbjct: 122 SGSNVVLRVVSRR--IVGQLVKIISVLEK------LSFQVLHLNISSMEETVLYFFVVKI 173
Query: 216 DVESDVTVKDLVKNLQPAL 234
+E +++++L +Q +
Sbjct: 174 GLECHLSLEELTLEVQKSF 192
>sp|Q9ZUG9|BH066_ARATH Transcription factor bHLH66 OS=Arabidopsis thaliana GN=BHLH66 PE=2
SV=1
Length = 350
Score = 55.5 bits (132), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 36/52 (69%)
Query: 59 HVIAERKRREKLNQRFIALSALVPGLKKTDKASILGDSIKYLKQLQERVKAL 110
H IAER RRE++ +R AL LVP KTDKAS+L + I Y+K LQ +VK L
Sbjct: 149 HSIAERLRRERIAERMKALQELVPNGNKTDKASMLDEIIDYVKFLQLQVKVL 200
>sp|O80536|PIF3_ARATH Transcription factor PIF3 OS=Arabidopsis thaliana GN=PIF3 PE=1 SV=1
Length = 524
Score = 55.1 bits (131), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 46/73 (63%)
Query: 38 KKVQEPRRVSSVIRDPSHAQDHVIAERKRREKLNQRFIALSALVPGLKKTDKASILGDSI 97
+K P R + A+ H ++ER+RR+++N++ AL L+P K DKAS+L ++I
Sbjct: 327 RKEAGPSRTGLGSKRSRSAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAI 386
Query: 98 KYLKQLQERVKAL 110
+YLK LQ +V+ +
Sbjct: 387 EYLKSLQLQVQIM 399
>sp|Q0V7X4|FIT_ARATH Transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION
FACTOR OS=Arabidopsis thaliana GN=FIT PE=1 SV=1
Length = 318
Score = 55.1 bits (131), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 39/52 (75%)
Query: 60 VIAERKRREKLNQRFIALSALVPGLKKTDKASILGDSIKYLKQLQERVKALE 111
+I+ER+RR ++ + AL +LVP + K DKASI+GD++ Y+++LQ + K L+
Sbjct: 133 LISERRRRGRMKDKLYALRSLVPNITKMDKASIVGDAVLYVQELQSQAKKLK 184
>sp|Q9LTC7|BH034_ARATH Transcription factor bHLH34 OS=Arabidopsis thaliana GN=BHLH34 PE=2
SV=1
Length = 320
Score = 55.1 bits (131), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 68/120 (56%), Gaps = 13/120 (10%)
Query: 11 GSSFHG--NINSSSSLISQGSYLDQFCSKKKVQEPRRVSSVIRDPSHAQDHVIAERKRRE 68
G F G INSSSS+ + ++ CS K+ RR S + + A E+ RRE
Sbjct: 125 GQVFSGVVEINSSSSVGAVKEEFEEECSGKR----RRTGSCSKPGTKA----CREKLRRE 176
Query: 69 KLNQRFIALSA-LVPG-LKKTDKASILGDSIKYLKQLQERVKALEEQTSKKTVESMIIVK 126
KLN +F+ LS+ L PG KTDK++IL D+I+ + QL+ L+E T++K +E + +K
Sbjct: 177 KLNDKFMDLSSVLEPGRTPKTDKSAILDDAIRVVNQLRGEAHELQE-TNQKLLEEIKSLK 235
>sp|Q8S3D5|BH069_ARATH Transcription factor bHLH69 OS=Arabidopsis thaliana GN=BHLH69 PE=2
SV=2
Length = 310
Score = 53.9 bits (128), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 36/52 (69%)
Query: 59 HVIAERKRREKLNQRFIALSALVPGLKKTDKASILGDSIKYLKQLQERVKAL 110
H IAER RRE++ +R +L LVP KTDKAS+L + I Y+K LQ +VK L
Sbjct: 141 HSIAERLRRERIAERMKSLQELVPNGNKTDKASMLDEIIDYVKFLQLQVKVL 192
>sp|Q9SVU7|BH056_ARATH Putative transcription factor bHLH056 OS=Arabidopsis thaliana
GN=BHLH56 PE=4 SV=2
Length = 445
Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 38/55 (69%)
Query: 56 AQDHVIAERKRREKLNQRFIALSALVPGLKKTDKASILGDSIKYLKQLQERVKAL 110
A+ H +AER+RREK+N++ L L+P K+ K S L D+I+Y+K LQ +++ +
Sbjct: 257 AEMHNLAERRRREKINEKMKTLQQLIPRCNKSTKVSTLDDAIEYVKSLQSQIQGM 311
>sp|Q9LSQ3|BH082_ARATH Transcription factor bHLH82 OS=Arabidopsis thaliana GN=BHLH82 PE=2
SV=1
Length = 297
Score = 53.5 bits (127), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 37/52 (71%)
Query: 59 HVIAERKRREKLNQRFIALSALVPGLKKTDKASILGDSIKYLKQLQERVKAL 110
H IAER RRE++ +R +L LVP KTDKAS+L + I+Y++ LQ +VK L
Sbjct: 110 HSIAERLRRERIAERMKSLQELVPNTNKTDKASMLDEIIEYVRFLQLQVKVL 161
>sp|Q8GX46|BH091_ARATH Transcription factor bHLH91 OS=Arabidopsis thaliana GN=BHLH91 PE=2
SV=1
Length = 428
Score = 52.0 bits (123), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 35/56 (62%)
Query: 62 AERKRREKLNQRFIALSALVPGLKKTDKASILGDSIKYLKQLQERVKALEEQTSKK 117
ER+RR LN+R+ AL L+P K D+ASIL D I Y+ +L+ RV L+ +K
Sbjct: 218 TERERRCHLNERYEALKLLIPSPSKGDRASILQDGIDYINELRRRVSELKYLVERK 273
>sp|Q8S3D2|BH087_ARATH Transcription factor bHLH87 OS=Arabidopsis thaliana GN=BHLH87 PE=2
SV=1
Length = 373
Score = 52.0 bits (123), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 46/73 (63%), Gaps = 6/73 (8%)
Query: 40 VQEPRRVSSVIR-DPSHAQDHVIAERKRREKLNQRFIALSALVPGLKKTDKASILGDSIK 98
V++P+R + I DP +A R+RRE+++++ L LVPG K D AS+L ++
Sbjct: 265 VEKPKRKNVKISTDP-----QTVAARQRRERISEKIRVLQTLVPGGTKMDTASMLDEAAN 319
Query: 99 YLKQLQERVKALE 111
YLK L+ +VKALE
Sbjct: 320 YLKFLRAQVKALE 332
>sp|Q8L5W8|PIL1_ARATH Transcription factor PIL1 OS=Arabidopsis thaliana GN=PIL1 PE=1 SV=1
Length = 416
Score = 52.0 bits (123), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 37/52 (71%)
Query: 59 HVIAERKRREKLNQRFIALSALVPGLKKTDKASILGDSIKYLKQLQERVKAL 110
H + ERKRR++ N++ AL L+P K DKAS+L ++IKY++ LQ +V+ +
Sbjct: 234 HKLYERKRRDEFNKKMRALQDLLPNCYKDDKASLLDEAIKYMRTLQLQVQMM 285
>sp|Q8W2F1|BH012_ARATH Transcription factor MYC1 OS=Arabidopsis thaliana GN=BHLH12 PE=1
SV=1
Length = 526
Score = 51.6 bits (122), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 75/138 (54%), Gaps = 17/138 (12%)
Query: 67 REKLNQRFIALSALVPGLKKTDKASILGDSIKYLKQLQERVKALEE--------QTSKKT 118
R K N++F L +VP + + DK SIL ++IKYL++L+ RV+ LE + +KT
Sbjct: 346 RRKENEKFSVLRTMVPTVNEVDKESILNNTIKYLQELEARVEELESCMGSVNFVERQRKT 405
Query: 119 VESM---IIVKKSQMIYTDDETSPTDINFDAQSNQYLPE---IEVRVSDRDVLIRIHCEK 172
E++ ++++++ Y DD T D + + + + + V++ + +V+I + C
Sbjct: 406 TENLNDSVLIEETSGNY-DDSTKIDDNSGETEQVTVFRDKTHLRVKLKETEVVIEVRCSY 464
Query: 173 NNNKGHLANILSEIENVH 190
+ +A+I+ + N+H
Sbjct: 465 RDYI--VADIMETLSNLH 480
>sp|Q9LTS4|BH041_ARATH Putative transcription factor bHLH041 OS=Arabidopsis thaliana
GN=BHLH41 PE=4 SV=1
Length = 466
Score = 51.6 bits (122), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Query: 53 PSHAQ-DHVIAERKRREKLNQRFIALSALVPGLKKTDKASILGDSIKYLKQLQERVKALE 111
PS Q H+I+ERKRREKLN+ F AL +L+P K DKAS+L + + L LQ + L
Sbjct: 283 PSATQLQHMISERKRREKLNESFQALRSLLPPGTKKDKASVLSIAREQLSSLQGEISKLL 342
Query: 112 EQ 113
E+
Sbjct: 343 ER 344
>sp|Q700C7|SPCH_ARATH Transcription factor SPEECHLESS OS=Arabidopsis thaliana GN=SPCH
PE=1 SV=1
Length = 364
Score = 51.2 bits (121), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 44/70 (62%), Gaps = 2/70 (2%)
Query: 51 RDPSHAQDHVIAERKRREKLNQRFIALSALVPGL--KKTDKASILGDSIKYLKQLQERVK 108
+D HV ER RR+++N+ L +L+P K+ D+ASI+G ++Y+ +LQ+ ++
Sbjct: 96 QDGQQKMSHVTVERNRRKQMNEHLTVLRSLMPCFYVKRGDQASIIGGVVEYISELQQVLQ 155
Query: 109 ALEEQTSKKT 118
+LE + +KT
Sbjct: 156 SLEAKKQRKT 165
>sp|Q9SVU6|BH023_ARATH Transcription factor bHLH23 OS=Arabidopsis thaliana GN=BHLH23 PE=2
SV=1
Length = 413
Score = 51.2 bits (121), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 37/52 (71%)
Query: 59 HVIAERKRREKLNQRFIALSALVPGLKKTDKASILGDSIKYLKQLQERVKAL 110
H ++ER+RR+K+N+ AL L+P KTD++S+L D I+Y+K LQ +++
Sbjct: 282 HKLSERRRRQKINEMMKALQELLPRCTKTDRSSMLDDVIEYVKSLQSQIQMF 333
>sp|Q9LXA9|BH061_ARATH Transcription factor bHLH61 OS=Arabidopsis thaliana GN=BHLH61 PE=2
SV=1
Length = 315
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 62/109 (56%), Gaps = 7/109 (6%)
Query: 4 SPAPTVAGSSFHGNINSSSSLISQGSYLDQFCSKKKVQEPRRVSSVIRDPSHAQDHVIAE 63
SP P + +S N N+ S L+ + F S + + R + PS +++AE
Sbjct: 104 SPPPLILPAS-QENTNNYSPLMEESK---SFISIGETNKKRSNKKLEGQPSK---NLMAE 156
Query: 64 RKRREKLNQRFIALSALVPGLKKTDKASILGDSIKYLKQLQERVKALEE 112
R+RR++LN R L ++VP + K D+ SILGD+I Y+K+L +++ L+E
Sbjct: 157 RRRRKRLNDRLSLLRSIVPKITKMDRTSILGDAIDYMKELLDKINKLQE 205
>sp|Q0WNR2|BH090_ARATH Transcription factor bHLH90 OS=Arabidopsis thaliana GN=BHLH90 PE=2
SV=1
Length = 441
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 82/165 (49%), Gaps = 18/165 (10%)
Query: 62 AERKRREKLNQRFIALSALVPGLKKTDKASILGDSIKYLKQLQ-ERVKALEEQTSKKTVE 120
+ERKRRE++NQ L A+VP + K +K I D++ Y+ +L E+ K +E +E
Sbjct: 268 SERKRRERINQAMYGLRAVVPKITKLNKIGIFSDAVDYINELLVEKQKLEDELKGINEME 327
Query: 121 SMIIVKKSQMIYTDDETSPTDINFDAQSNQYLPEIEVRV-----SDRDVLIRIHCEKNNN 175
I + Q D E ++SN+ + + EV++ +RD LIR+ E +
Sbjct: 328 CKEIAAEEQSAIADPEAE----RVSSKSNKRVKKNEVKIEVHETGERDFLIRVVQE---H 380
Query: 176 KGHLANILSEIENVHHLSVLSCNVLPFGNSTVDITVVAQMDVESD 220
K L E ++ L ++ N + +D+TV+ ++V+++
Sbjct: 381 KQDGFKRLIEAVDLCELEIIDVNF-----TRLDLTVMTVLNVKAN 420
>sp|Q7XHI7|BH127_ARATH Transcription factor bHLH127 OS=Arabidopsis thaliana GN=BHLH127
PE=2 SV=1
Length = 307
Score = 50.1 bits (118), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 36/52 (69%)
Query: 56 AQDHVIAERKRREKLNQRFIALSALVPGLKKTDKASILGDSIKYLKQLQERV 107
A+ H +AER+RREK+N+R L L+P K+ K S+L D I+Y+K L+ ++
Sbjct: 152 AEMHNLAERRRREKINERMKTLQQLIPRCNKSTKVSMLEDVIEYVKSLEMQI 203
>sp|Q9C7T4|BH096_ARATH Transcription factor bHLH96 OS=Arabidopsis thaliana GN=BHLH96 PE=2
SV=1
Length = 320
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 97/194 (50%), Gaps = 24/194 (12%)
Query: 59 HVIAERKRREKLNQRFIALSALVPGL--KKTDKASILGDSIKYLKQLQERVKALE----- 111
H+ ER RR+++N+ L +L+P ++ D+ASI+G +I YLK+L+ ++++E
Sbjct: 127 HIAVERNRRKQMNEYLAVLRSLMPPYYAQRGDQASIVGGAINYLKELEHHLQSMEPPVKT 186
Query: 112 --EQTSKKTVESMIIVKKSQMIYTDDETSPTDIN--FDAQSNQYLPEIEVRVSDRDVLIR 167
E T ++ S ++D P N A + + + EIEV + + ++
Sbjct: 187 ATEDTGAGHDQTKTTSASSSGPFSDFFAFPQYSNRPTSAAAAEGMAEIEVTMVESHASLK 246
Query: 168 IHCEKNNNKGHLANILSEIENVHHLSVLSCNVLPFGNSTVDITVVAQMDVESDV-----T 222
I +K + L ++S I+++ L++L NV +T D +V+ + V+ + T
Sbjct: 247 ILAKKRPRQ--LLKLVSSIQSL-RLTLLHLNV-----TTRDDSVLYSISVKVEEGSQLNT 298
Query: 223 VKDLVKNLQPALRK 236
V+D+ + LR+
Sbjct: 299 VEDIAAAVNQILRR 312
>sp|Q9C690|BH122_ARATH Transcription factor bHLH122 OS=Arabidopsis thaliana GN=BHLH122
PE=1 SV=1
Length = 379
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
Query: 61 IAERKRREKLNQRFIALSALVPGL-KKTDKASILGDSIKYLKQLQERVKALEEQTSK 116
IAER RR K+++R L LVP + +T+ A +L +++Y+K LQE+VKALEE ++
Sbjct: 317 IAERVRRTKISERMRKLQDLVPNMDTQTNTADMLDLAVQYIKDLQEQVKALEESRAR 373
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.128 0.347
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 79,696,423
Number of Sequences: 539616
Number of extensions: 3082883
Number of successful extensions: 9582
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 157
Number of HSP's successfully gapped in prelim test: 210
Number of HSP's that attempted gapping in prelim test: 9344
Number of HSP's gapped (non-prelim): 380
length of query: 238
length of database: 191,569,459
effective HSP length: 114
effective length of query: 124
effective length of database: 130,053,235
effective search space: 16126601140
effective search space used: 16126601140
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 59 (27.3 bits)