Query 026440
Match_columns 238
No_of_seqs 166 out of 2102
Neff 11.4
Searched_HMMs 29240
Date Mon Mar 25 13:36:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026440.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/026440hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1yyh_A HN1;, notch 1, ankyrin 100.0 1.7E-47 5.7E-52 284.8 22.1 231 1-235 1-245 (253)
2 3b7b_A Euchromatic histone-lys 100.0 2E-46 6.7E-51 276.4 26.0 231 1-236 2-234 (237)
3 3aji_A 26S proteasome non-ATPa 100.0 6E-46 2E-50 272.8 25.9 223 8-234 4-226 (231)
4 1k1a_A B-cell lymphoma 3-encod 100.0 1.1E-45 3.8E-50 273.0 24.4 227 4-233 3-236 (241)
5 2dzn_A Probable 26S proteasome 100.0 1.1E-44 3.8E-49 265.6 26.7 220 10-233 2-225 (228)
6 1oy3_D Transcription factor in 100.0 9.7E-45 3.3E-49 273.8 22.4 220 4-226 3-271 (282)
7 2xai_A ASB-9, ankyrin repeat a 100.0 5.6E-44 1.9E-48 267.0 26.1 214 10-232 3-216 (261)
8 4b93_B Ankyrin repeat domain-c 100.0 1.8E-45 6.3E-50 275.5 17.3 221 9-234 10-237 (269)
9 3d9h_A CDNA FLJ77766, highly s 100.0 1.1E-43 3.8E-48 268.5 25.7 220 6-234 55-274 (285)
10 3ljn_A Hypothetical protein; a 100.0 2.9E-44 1E-48 280.7 20.8 225 3-234 13-265 (364)
11 1wdy_A 2-5A-dependent ribonucl 100.0 5.7E-43 1.9E-47 264.3 26.2 223 7-234 36-274 (285)
12 3eu9_A Huntingtin-interacting 100.0 6E-43 2E-47 258.0 23.4 228 4-235 3-232 (240)
13 1n11_A Ankyrin; clathrin, BAND 100.0 4.8E-43 1.6E-47 280.1 24.6 225 7-236 176-400 (437)
14 3utm_A Tankyrase-1; tankyrase, 100.0 3.7E-43 1.3E-47 272.9 22.9 222 7-232 21-299 (351)
15 2fo1_E LIN-12 protein; beta-ba 100.0 1.5E-43 5.3E-48 277.2 19.4 229 3-234 117-367 (373)
16 3utm_A Tankyrase-1; tankyrase, 100.0 3.8E-42 1.3E-46 267.1 25.9 224 2-234 50-330 (351)
17 1wdy_A 2-5A-dependent ribonucl 100.0 5.8E-42 2E-46 258.8 25.8 221 9-234 4-240 (285)
18 2f8y_A Notch homolog 1, transl 100.0 5.1E-43 1.7E-47 255.9 18.8 211 20-234 1-212 (223)
19 1s70_B 130 kDa myosin-binding 100.0 1.3E-42 4.4E-47 264.4 21.1 220 9-233 39-285 (299)
20 3d9h_A CDNA FLJ77766, highly s 100.0 3.5E-42 1.2E-46 260.3 23.0 223 7-234 12-243 (285)
21 1n11_A Ankyrin; clathrin, BAND 100.0 7.1E-42 2.4E-46 273.3 25.0 225 3-232 7-231 (437)
22 1oy3_D Transcription factor in 100.0 1.9E-41 6.4E-46 255.9 22.2 197 38-234 2-246 (282)
23 4g8k_A 2-5A-dependent ribonucl 100.0 8.2E-41 2.8E-45 258.6 25.3 222 10-233 25-293 (337)
24 3kea_A K1L; tropism, ANK repea 100.0 6.9E-41 2.4E-45 253.1 18.7 217 3-234 24-242 (285)
25 1ikn_D Protein (I-kappa-B-alph 100.0 9.9E-42 3.4E-46 251.2 12.6 217 6-225 4-231 (236)
26 3b7b_A Euchromatic histone-lys 100.0 1.4E-39 4.6E-44 239.9 23.0 194 37-233 3-197 (237)
27 3ljn_A Hypothetical protein; a 100.0 2.8E-40 9.7E-45 258.1 20.5 226 2-231 45-307 (364)
28 1yyh_A HN1;, notch 1, ankyrin 100.0 2.8E-40 9.5E-45 245.9 17.8 196 37-234 2-211 (253)
29 2xai_A ASB-9, ankyrin repeat a 100.0 1.1E-39 3.6E-44 243.8 21.0 222 2-232 28-257 (261)
30 2f8y_A Notch homolog 1, transl 100.0 7.1E-39 2.4E-43 233.9 24.2 197 7-207 22-218 (223)
31 1k1a_A B-cell lymphoma 3-encod 100.0 4.3E-39 1.5E-43 237.6 22.9 196 39-234 3-204 (241)
32 3kea_A K1L; tropism, ANK repea 100.0 2.4E-40 8.1E-45 250.2 16.0 207 18-233 7-215 (285)
33 2rfa_A Transient receptor pote 100.0 2.8E-39 9.7E-44 237.4 21.1 201 9-210 2-227 (232)
34 2rfa_A Transient receptor pote 100.0 2.4E-39 8.3E-44 237.8 20.4 188 44-234 2-218 (232)
35 1ikn_D Protein (I-kappa-B-alph 100.0 2.6E-40 8.9E-45 243.6 14.6 195 40-234 3-205 (236)
36 4g8k_A 2-5A-dependent ribonucl 100.0 1.2E-38 4.1E-43 246.5 24.5 226 3-233 51-321 (337)
37 3aji_A 26S proteasome non-ATPa 100.0 3.2E-39 1.1E-43 237.0 19.3 197 5-206 35-231 (231)
38 3hra_A Ankyrin repeat family p 100.0 1.3E-38 4.4E-43 229.0 21.8 187 44-232 4-197 (201)
39 3hra_A Ankyrin repeat family p 100.0 2E-38 6.7E-43 228.0 21.9 192 8-203 3-201 (201)
40 2pnn_A Transient receptor pote 100.0 2E-39 6.7E-44 243.9 16.5 215 4-218 7-272 (273)
41 2dzn_A Probable 26S proteasome 100.0 3.5E-38 1.2E-42 231.0 22.1 187 45-233 2-194 (228)
42 2fo1_E LIN-12 protein; beta-ba 100.0 4.1E-40 1.4E-44 257.8 12.6 221 6-234 90-334 (373)
43 4gpm_A Engineered protein OR26 100.0 5.3E-38 1.8E-42 218.8 20.3 160 47-209 6-165 (169)
44 2etb_A Transient receptor pote 100.0 1.5E-38 5E-43 237.0 15.1 200 9-208 1-249 (256)
45 2etb_A Transient receptor pote 100.0 3.7E-38 1.3E-42 234.8 17.1 187 45-234 2-242 (256)
46 1s70_B 130 kDa myosin-binding 100.0 4.3E-38 1.5E-42 239.5 16.5 216 16-234 4-253 (299)
47 4b93_B Ankyrin repeat domain-c 100.0 7.5E-38 2.6E-42 234.3 16.0 194 40-233 6-205 (269)
48 3eu9_A Huntingtin-interacting 100.0 1.8E-36 6E-41 223.4 20.8 203 2-208 34-238 (240)
49 4gpm_A Engineered protein OR26 100.0 1.1E-36 3.7E-41 212.2 18.6 151 83-233 6-156 (169)
50 2pnn_A Transient receptor pote 100.0 1.3E-37 4.5E-42 233.9 13.5 197 38-234 6-254 (273)
51 3jxi_A Vanilloid receptor-rela 100.0 2E-37 6.7E-42 231.4 13.8 201 8-208 3-253 (260)
52 1sw6_A Regulatory protein SWI6 100.0 1.5E-37 5.2E-42 239.2 12.0 198 14-224 101-327 (327)
53 3jxi_A Vanilloid receptor-rela 100.0 2.2E-36 7.5E-41 225.7 16.5 193 42-234 2-246 (260)
54 4hbd_A KN motif and ankyrin re 100.0 4.1E-36 1.4E-40 225.9 17.0 187 46-233 77-270 (276)
55 2rfm_A Putative ankyrin repeat 100.0 2.6E-35 8.8E-40 210.3 19.1 164 37-203 27-190 (192)
56 3v30_A DNA-binding protein rfx 100.0 2E-35 6.9E-40 207.2 17.2 170 45-216 2-171 (172)
57 2rfm_A Putative ankyrin repeat 100.0 5.2E-35 1.8E-39 208.7 17.3 162 74-235 28-189 (192)
58 4hbd_A KN motif and ankyrin re 100.0 1.1E-35 3.8E-40 223.6 14.2 190 11-203 77-273 (276)
59 1ihb_A P18-INK4C(INK6), cyclin 100.0 2E-34 6.9E-39 200.1 17.5 159 43-205 3-162 (162)
60 3v31_A Ankyrin repeat family A 100.0 2.6E-34 8.9E-39 200.6 17.9 159 44-205 2-160 (167)
61 2y1l_E Darpin-8.4; hydrolase-i 100.0 7.2E-34 2.4E-38 198.7 19.6 158 43-203 12-169 (169)
62 3v31_A Ankyrin repeat family A 100.0 4.9E-34 1.7E-38 199.2 18.2 156 80-235 2-157 (167)
63 2y1l_E Darpin-8.4; hydrolase-i 100.0 5.6E-34 1.9E-38 199.3 17.3 158 77-234 10-167 (169)
64 1awc_B Protein (GA binding pro 100.0 1.1E-33 3.8E-38 194.6 17.0 149 83-232 4-152 (153)
65 3v30_A DNA-binding protein rfx 100.0 5.3E-34 1.8E-38 200.0 15.5 169 11-183 3-171 (172)
66 3f6q_A Integrin-linked protein 100.0 1E-33 3.6E-38 199.7 17.0 169 43-213 3-171 (179)
67 2vge_A RELA-associated inhibit 100.0 8.4E-37 2.9E-41 223.5 0.4 199 26-230 1-205 (229)
68 1awc_B Protein (GA binding pro 100.0 1.2E-32 4.1E-37 189.4 18.8 151 45-199 2-152 (153)
69 3twr_A Tankyrase-2; ankyrin re 100.0 2.1E-33 7.1E-38 195.6 14.9 159 42-203 5-163 (165)
70 3twr_A Tankyrase-2; ankyrin re 100.0 6.7E-33 2.3E-37 193.0 16.8 155 78-233 5-160 (165)
71 1ihb_A P18-INK4C(INK6), cyclin 100.0 4.6E-33 1.6E-37 193.3 15.3 154 80-234 4-158 (162)
72 3f6q_A Integrin-linked protein 100.0 2.7E-32 9.2E-37 192.5 18.6 156 79-234 3-159 (179)
73 1bd8_A P19INK4D CDK4/6 inhibit 100.0 4.4E-32 1.5E-36 187.1 18.0 154 45-202 2-155 (156)
74 1bd8_A P19INK4D CDK4/6 inhibit 100.0 4.6E-32 1.6E-36 187.1 15.5 152 81-234 2-154 (156)
75 1ycs_B 53BP2, P53BP2; ankyrin 100.0 3.3E-33 1.1E-37 205.9 10.2 179 43-225 3-193 (239)
76 1sw6_A Regulatory protein SWI6 100.0 2.3E-33 7.7E-38 215.9 8.9 214 5-234 47-304 (327)
77 1bi7_B P16INK4A, MTS1, multipl 100.0 5.3E-31 1.8E-35 181.7 11.4 145 75-220 6-151 (156)
78 1ycs_B 53BP2, P53BP2; ankyrin 100.0 1E-30 3.5E-35 192.6 13.5 155 79-234 3-160 (239)
79 2vge_A RELA-associated inhibit 100.0 1.7E-31 5.8E-36 195.3 9.0 164 61-224 1-167 (229)
80 1d9s_A Cyclin-dependent kinase 100.0 6E-30 2E-34 172.4 13.2 131 74-205 5-136 (136)
81 3t8k_A Uncharacterized protein 100.0 1.1E-30 3.6E-35 184.8 9.1 159 45-208 6-182 (186)
82 3t8k_A Uncharacterized protein 100.0 2.4E-30 8.4E-35 183.0 10.1 154 81-236 6-177 (186)
83 2aja_A Ankyrin repeat family p 100.0 3.2E-32 1.1E-36 211.8 -2.0 156 10-173 92-251 (376)
84 1n0r_A 4ANK, 4 ankyrin repeats 100.0 2.1E-28 7.1E-33 162.5 16.3 126 80-205 1-126 (126)
85 1bi7_B P16INK4A, MTS1, multipl 100.0 1.9E-29 6.4E-34 174.0 11.4 145 39-187 6-151 (156)
86 2aja_A Ankyrin repeat family p 100.0 3.7E-32 1.3E-36 211.5 -2.4 196 13-229 68-270 (376)
87 1d9s_A Cyclin-dependent kinase 100.0 4.1E-29 1.4E-33 168.3 12.6 130 104-234 2-132 (136)
88 3c5r_A BARD-1, BRCA1-associate 100.0 7.6E-29 2.6E-33 167.2 12.6 129 104-233 1-129 (137)
89 2jab_A H10-2-G3; HER2, darpin, 100.0 3.9E-28 1.3E-32 163.5 14.5 125 79-203 12-136 (136)
90 1n0r_A 4ANK, 4 ankyrin repeats 100.0 3.3E-27 1.1E-31 156.7 16.0 126 44-172 1-126 (126)
91 2jab_A H10-2-G3; HER2, darpin, 100.0 1.4E-27 4.9E-32 160.7 14.2 123 112-234 12-134 (136)
92 3aaa_C Myotrophin, protein V-1 99.9 3.5E-27 1.2E-31 156.1 13.1 118 111-228 4-121 (123)
93 2b0o_E UPLC1; arfgap, structur 99.9 2.4E-26 8.3E-31 174.4 15.4 140 81-226 151-299 (301)
94 3c5r_A BARD-1, BRCA1-associate 99.9 2.7E-27 9.3E-32 159.6 9.1 128 76-203 5-132 (137)
95 3deo_A Signal recognition part 99.9 8E-27 2.8E-31 164.9 10.4 109 44-156 43-152 (183)
96 3ehr_A Osteoclast-stimulating 99.9 4E-27 1.4E-31 171.5 9.0 138 77-214 69-207 (222)
97 3ui2_A Signal recognition part 99.9 1.8E-26 6.1E-31 170.3 12.1 142 43-205 43-185 (244)
98 3deo_A Signal recognition part 99.9 4.9E-26 1.7E-30 160.9 13.7 139 78-234 41-180 (183)
99 3ui2_A Signal recognition part 99.9 2.6E-26 8.7E-31 169.5 11.0 139 78-234 42-181 (244)
100 2b0o_E UPLC1; arfgap, structur 99.9 1.2E-25 4.1E-30 170.6 13.8 143 44-192 150-298 (301)
101 3aaa_C Myotrophin, protein V-1 99.9 8.4E-26 2.9E-30 149.4 10.6 110 79-188 5-114 (123)
102 3ehr_A Osteoclast-stimulating 99.9 1.5E-25 5.1E-30 163.2 10.9 123 111-233 70-193 (222)
103 1dcq_A PYK2-associated protein 99.9 1.9E-24 6.3E-29 162.3 14.8 124 82-205 131-263 (278)
104 3lvq_E ARF-GAP with SH3 domain 99.9 7.8E-24 2.7E-28 171.3 17.5 129 82-210 133-270 (497)
105 1dcq_A PYK2-associated protein 99.9 8.4E-24 2.9E-28 158.7 15.1 188 41-234 62-259 (278)
106 3jue_A Arfgap with coiled-coil 99.9 8.2E-24 2.8E-28 164.1 14.3 144 80-223 198-347 (368)
107 1n0q_A 3ANK, 3 ankyrin repeats 99.9 2.2E-23 7.5E-28 130.8 12.5 92 114-205 2-93 (93)
108 2l6b_A NR1C; ankyrin, consensu 99.9 5.2E-24 1.8E-28 139.1 8.8 108 110-217 5-112 (115)
109 3lvq_E ARF-GAP with SH3 domain 99.9 5.6E-23 1.9E-27 166.3 16.6 139 44-188 131-275 (497)
110 3jue_A Arfgap with coiled-coil 99.9 4.7E-23 1.6E-27 159.8 14.3 146 43-191 197-348 (368)
111 1n0q_A 3ANK, 3 ankyrin repeats 99.9 2.1E-22 7.4E-27 126.2 12.3 91 81-171 2-92 (93)
112 2l6b_A NR1C; ankyrin, consensu 99.9 8.3E-23 2.8E-27 133.3 8.1 107 77-183 5-111 (115)
113 2zgd_A 3 repeat synthetic anky 99.8 6.4E-21 2.2E-25 123.2 8.3 90 143-232 20-109 (110)
114 2zgd_A 3 repeat synthetic anky 99.8 1.9E-19 6.4E-24 116.3 11.3 90 110-199 20-109 (110)
115 4g26_A Pentatricopeptide repea 79.8 9.3 0.00032 30.8 8.2 153 12-174 31-209 (501)
116 1gp8_A Protein (scaffolding pr 74.5 3.3 0.00011 19.9 2.5 26 8-33 11-36 (40)
117 3gvo_A Pumilio 2, pumilio homo 74.0 4.3 0.00015 31.0 4.6 55 12-66 39-94 (351)
118 3gvo_A Pumilio 2, pumilio homo 71.7 9.4 0.00032 29.1 6.0 193 7-199 70-272 (351)
119 3k49_A MRNA-binding protein PU 63.3 11 0.00039 28.9 5.0 26 177-202 261-286 (369)
120 3mkq_B Coatomer subunit alpha; 61.2 36 0.0012 23.1 8.2 130 46-201 9-139 (177)
121 3mkq_B Coatomer subunit alpha; 49.6 58 0.002 22.1 10.0 132 9-169 7-140 (177)
122 3qil_A Clathrin heavy chain 1; 34.7 17 0.00057 23.0 1.3 26 8-33 33-58 (125)
123 3k49_A MRNA-binding protein PU 26.8 71 0.0024 24.4 4.1 58 9-66 41-99 (369)
124 3zrh_A Ubiquitin thioesterase 24.4 1.2E+02 0.0042 23.8 4.8 50 16-66 28-90 (454)
No 1
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=1.7e-47 Score=284.85 Aligned_cols=231 Identities=24% Similarity=0.296 Sum_probs=184.5
Q ss_pred CccchhhhccChHHHHHHHcC-------------ChHHHHHHHHHHhhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhh
Q 026440 1 MDMDIDQTIKDKDLFKAAETG-------------DSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAASCGHPEVVEILLSV 67 (238)
Q Consensus 1 ~~~~~~~~~~~~~l~~a~~~g-------------~~~~v~~l~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~ 67 (238)
+|++..+..+.++||.|+..| +.+++++|++.+. ......+..|.||||+|+..|+.+++++|++.
T Consensus 1 ~dvn~~d~~g~tpL~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll~~g~-~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ 79 (253)
T 1yyh_A 1 MDVNVRGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGA-SLHNQTDRTGETALHLAARYSRSDAAKRLLEA 79 (253)
T ss_dssp ----------------------------------------------------CCCTTSCCHHHHHHHTTCHHHHHHHHHT
T ss_pred CCCCCCCCCCCcHHHHHHhccccccccchhhcCCChHHHHHHHHccC-CcccccCCCCCcHHHHHHHcCCHHHHHHHHHc
Confidence 578889999999999999988 9999999999883 33345588999999999999999999999998
Q ss_pred cccccccccccCCCCcHHHHHHHcCCHHHHHHHHHcCC-CCcccCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCC
Q 026440 68 DESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSKGA-DVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKV 146 (238)
Q Consensus 68 ~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~-~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~ 146 (238)
|.+ ++..+..|.||||+|+..++.+++++|++.+. +++..+..|.|||++|+..|+.+++++|++.|++++..+..
T Consensus 80 g~~---~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~ 156 (253)
T 1yyh_A 80 SAD---ANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDL 156 (253)
T ss_dssp TCC---TTCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHTCSSHHHHHHHTTCCTTCBCTT
T ss_pred CCC---CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCCCcCCC
Confidence 877 66778899999999999999999999999987 88888999999999999999999999999999999999999
Q ss_pred CCcHHHHHHhhCCHHHHHHHHhcCCCCCccccCCCcHHHHHHHhCCHHHHHHHHhcCCCCccCCCCCCchhhccccccch
Q 026440 147 GCTALHRGASTGNSALCELLIEEGAEVDATDKAGQTPLMNAVICYNKEVALLLIRHGADVDVEDKEGYTVLGRASNDFRP 226 (238)
Q Consensus 147 ~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpl~~a~~~~~~ 226 (238)
|.||||+|+..++.+++++|+++|++++.++..|.||||+|+..++.+++++|+++|++++.+|..|.||+++|...++.
T Consensus 157 g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~g~~ 236 (253)
T 1yyh_A 157 GKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHH 236 (253)
T ss_dssp SCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCccccccCCCCHHHHHHHcCCH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHH
Q 026440 227 ILIDAAKAM 235 (238)
Q Consensus 227 ~~~~~~~~~ 235 (238)
+++++++..
T Consensus 237 ~i~~~l~~~ 245 (253)
T 1yyh_A 237 DIVRLLDLE 245 (253)
T ss_dssp HHHHHHHC-
T ss_pred HHHHHHHHH
Confidence 999998754
No 2
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=2e-46 Score=276.44 Aligned_cols=231 Identities=30% Similarity=0.427 Sum_probs=215.2
Q ss_pred CccchhhhccChHHHHHHHcCChHHHHHHHHHHhhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhhcccccccccccCC
Q 026440 1 MDMDIDQTIKDKDLFKAAETGDSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEE 80 (238)
Q Consensus 1 ~~~~~~~~~~~~~l~~a~~~g~~~~v~~l~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~ 80 (238)
+|++..+..+.++||.|+..|+.+++++|++.+ .+++..+..|.||||+|+..|+.+++++|++.+.. ++..+..
T Consensus 2 ~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~---~~~~~~~ 76 (237)
T 3b7b_A 2 MNFKMEHQNKRSPLHAAAEAGHVDICHMLVQAG--ANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAGAL---VDPKDAE 76 (237)
T ss_dssp CCCCCSSCCSCCHHHHHHHHTCHHHHHHHHHTT--CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCC---CCCCCTT
T ss_pred CCcccccCCCCCHHHHHHHcCcHHHHHHHHHcC--CCcCccCCCCCCHHHHHHHhCCHHHHHHHHhCCCC---CCCCCCC
Confidence 477888999999999999999999999999986 46778889999999999999999999999998776 6667889
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHcC-CCCcccCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHhhCC
Q 026440 81 GWAPIHSAASIGNVTIVEMLLSKG-ADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGN 159 (238)
Q Consensus 81 ~~t~l~~a~~~~~~~~~~~Ll~~~-~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~ 159 (238)
|.|||++|+..++.+++++|++.+ .+++..+..|.|||++|+..++.+++++|+++|++++..+..|.||||.|+..++
T Consensus 77 g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 156 (237)
T 3b7b_A 77 GSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSGC 156 (237)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCC
T ss_pred CCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHCCC
Confidence 999999999999999999999998 7888889999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCCccccCCCcHHHHHHHhCCHHHHHHHHhcCCCCccCCCCCCchhhccccccchHHH-HHHHHHh
Q 026440 160 SALCELLIEEGAEVDATDKAGQTPLMNAVICYNKEVALLLIRHGADVDVEDKEGYTVLGRASNDFRPILI-DAAKAML 236 (238)
Q Consensus 160 ~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpl~~a~~~~~~~~~-~~~~~~~ 236 (238)
.+++++|+++|++++..+..|.||||+|+..++.+++++|+++|++++.+|..|.||+++|+.+++...+ ++++.+.
T Consensus 157 ~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~~~~~~~~~~l~~~l~ 234 (237)
T 3b7b_A 157 VDIAEILLAAKCDLHAVNIHGDSPLHIAARENRYDCVVLFLSRDSDVTLKNKEGETPLQCASLNSQVWSALQMSKALQ 234 (237)
T ss_dssp HHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHSCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHhHHHHHHHcCCCCCccCCCCCCHHHHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999999999999999999999999999999999999999999999999999997544 4444443
No 3
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=6e-46 Score=272.85 Aligned_cols=223 Identities=37% Similarity=0.484 Sum_probs=211.9
Q ss_pred hccChHHHHHHHcCChHHHHHHHHHHhhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhhcccccccccccCCCCcHHHH
Q 026440 8 TIKDKDLFKAAETGDSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHS 87 (238)
Q Consensus 8 ~~~~~~l~~a~~~g~~~~v~~l~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~t~l~~ 87 (238)
..++++|+.|+..|+.+.++++++.+ +...+..+..|.||||+|+..|+.+++++|++.+.+ ++..+..|+||||+
T Consensus 4 ~~~~~~l~~A~~~g~~~~v~~ll~~~-~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~---~~~~~~~g~t~L~~ 79 (231)
T 3aji_A 4 CVSNIMICNLAYSGKLDELKERILAD-KSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVP---VNDKDDAGWSPLHI 79 (231)
T ss_dssp CCSSSHHHHHHHHTCHHHHHHHHHHC-GGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC---SCCCCTTSCCHHHH
T ss_pred ccccchHHHHHHhCCHHHHHHHHHhc-hhhhhcCCCCCCCHHHHHHHcCcHHHHHHHHHhCCC---CCCcCCCCCCHHHH
Confidence 45778999999999999999999987 455778899999999999999999999999998876 66778899999999
Q ss_pred HHHcCCHHHHHHHHHcCCCCcccCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHhhCCHHHHHHHH
Q 026440 88 AASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELLI 167 (238)
Q Consensus 88 a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll 167 (238)
|+..++.+++++|+++|++++.++..|.|||++|+..++.+++++|++.|++++..+..|.||||.|+..++.+++++|+
T Consensus 80 A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 159 (231)
T 3aji_A 80 AASAGXDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHILL 159 (231)
T ss_dssp HHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHH
T ss_pred HHHcCHHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCCCCccccCCCcHHHHHHHhCCHHHHHHHHhcCCCCccCCCCCCchhhccccccchHHHHHHHH
Q 026440 168 EEGAEVDATDKAGQTPLMNAVICYNKEVALLLIRHGADVDVEDKEGYTVLGRASNDFRPILIDAAKA 234 (238)
Q Consensus 168 ~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~~~~ 234 (238)
++|++++.++..|.||||+|+..++.+++++|+++|++++.+|..|.||+++|...++.++.++|+.
T Consensus 160 ~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~lL~~ 226 (231)
T 3aji_A 160 FYKASTNIQDTEGNTPLHLACDEERVEEAKFLVTQGASIYIENKEEKTPLQVAKGGLGLILKRLAEG 226 (231)
T ss_dssp HTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHSCHHHHHHHHHHHHH
T ss_pred hcCCCccccCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHhhHHHHHHHHHcc
Confidence 9999999999999999999999999999999999999999999999999999999999999888875
No 4
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=1.1e-45 Score=272.99 Aligned_cols=227 Identities=27% Similarity=0.300 Sum_probs=207.2
Q ss_pred chhhhccChHHHHHHHcCChHHHHHHHHHH--hhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhhcccccccccccCCC
Q 026440 4 DIDQTIKDKDLFKAAETGDSSTFKSLSKQQ--LLKSLSLRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEG 81 (238)
Q Consensus 4 ~~~~~~~~~~l~~a~~~g~~~~v~~l~~~~--~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~ 81 (238)
+..+..+.++||+|+..|+.+++++|++.. .+.+++..+..|.||||+|+..|+.+++++|++.+.+ ++..+..|
T Consensus 3 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~---~~~~~~~g 79 (241)
T 1k1a_A 3 TRADEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGAS---PMALDRHG 79 (241)
T ss_dssp ----CTTCCHHHHHHHTTCHHHHHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC---TTCCCTTS
T ss_pred cccCCCCCcHHHHHHHcCCHHHHHHHHHHHHhcCCCCCcccccCCCHHHHHHHcCCHHHHHHHHHcCCC---ccccCCCC
Confidence 346778899999999999999999999842 2456788899999999999999999999999998877 56678899
Q ss_pred CcHHHHHHHcCCHHHHHHHHHcCC----CCcccCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCC-CCCCcHHHHHHh
Q 026440 82 WAPIHSAASIGNVTIVEMLLSKGA----DVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKD-KVGCTALHRGAS 156 (238)
Q Consensus 82 ~t~l~~a~~~~~~~~~~~Ll~~~~----~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~-~~~~t~l~~a~~ 156 (238)
.||||+|+..++.+++++|++.+. +++..+..|.|||++|+..|+.+++++|++.|++++..+ ..|.||||+|+.
T Consensus 80 ~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~A~~ 159 (241)
T 1k1a_A 80 QTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVE 159 (241)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCcccccccCCCcHHHHHHH
Confidence 999999999999999999999987 778888899999999999999999999999999999988 789999999999
Q ss_pred hCCHHHHHHHHhcCCCCCccccCCCcHHHHHHHhCCHHHHHHHHhcCCCCccCCCCCCchhhccccccchHHHHHHH
Q 026440 157 TGNSALCELLIEEGAEVDATDKAGQTPLMNAVICYNKEVALLLIRHGADVDVEDKEGYTVLGRASNDFRPILIDAAK 233 (238)
Q Consensus 157 ~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~~~ 233 (238)
.++.+++++|+++|++++.++..|.||||+|+..++.+++++|+++|++++.+|..|.||+++|+..++.++++.+.
T Consensus 160 ~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~i~~~l~ 236 (241)
T 1k1a_A 160 NNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRVIDILRGKA 236 (241)
T ss_dssp TTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCTTTTCSSHHHHHHHTC--
T ss_pred cCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCcCCCCCCHHHHHHhcCcHHHHhhhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999977776554
No 5
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=1.1e-44 Score=265.56 Aligned_cols=220 Identities=32% Similarity=0.461 Sum_probs=202.0
Q ss_pred cChHHHHHHHcCChHHHHHHHHHHhhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhhcccccccccccCCCCcHHHHHH
Q 026440 10 KDKDLFKAAETGDSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAA 89 (238)
Q Consensus 10 ~~~~l~~a~~~g~~~~v~~l~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~t~l~~a~ 89 (238)
++++||.|+..|+.+++++|++.+ .......+..|.||||+|+..|+.+++++|++.+.........+..|.||||+|+
T Consensus 2 g~t~L~~A~~~g~~~~v~~Ll~~~-~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~ 80 (228)
T 2dzn_A 2 SNYPLHQACMENEFFKVQELLHSK-PSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIAC 80 (228)
T ss_dssp -CCHHHHHHHTTCHHHHHHHHHHC-GGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHH
T ss_pred CccHHHHHHHhCCHHHHHHHHhcC-ccccccCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHHH
Confidence 578999999999999999999988 4455568899999999999999999999999988655533337889999999999
Q ss_pred HcCCHHHHHHHHHcC--CCCcccCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHhhCCHHHHHHHH
Q 026440 90 SIGNVTIVEMLLSKG--ADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELLI 167 (238)
Q Consensus 90 ~~~~~~~~~~Ll~~~--~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll 167 (238)
..++.+++++|++.| .+++..+..|.||||+|+..++.+++++|+++|++++..+..|.||||+|+..++.+++++|+
T Consensus 81 ~~~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 160 (228)
T 2dzn_A 81 SVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLC 160 (228)
T ss_dssp HHCCHHHHHHHHSSSSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred HcCCHHHHHHHHhCCCCcccccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 999999999999998 888888999999999999999999999999999999999999999999999999999999999
Q ss_pred hcC-CCCCccccCCCcHHHHHHHhCCHHHHHHHH-hcCCCCccCCCCCCchhhccccccchHHHHHHH
Q 026440 168 EEG-AEVDATDKAGQTPLMNAVICYNKEVALLLI-RHGADVDVEDKEGYTVLGRASNDFRPILIDAAK 233 (238)
Q Consensus 168 ~~~-~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll-~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~~~ 233 (238)
+.| ++++.++..|.||||+|+..++.+++++|+ ++|++++.+|..|.||+++|.+.+. .++++
T Consensus 161 ~~g~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga~~~~~~~~g~t~l~~A~~~~~---~~~l~ 225 (228)
T 2dzn_A 161 GLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVALNEQV---KKFFL 225 (228)
T ss_dssp TTTCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCCSCCBCTTSCBGGGGCSSTTH---HHHHH
T ss_pred hcCcccccCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCcHHHHHHHHHH---HHHHH
Confidence 999 999999999999999999999999999999 8999999999999999999987643 44443
No 6
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=9.7e-45 Score=273.85 Aligned_cols=220 Identities=27% Similarity=0.296 Sum_probs=189.0
Q ss_pred chhhhccChHHHHHHHcCChHHHHHHHHHHhhh-hcCCCCCCCchHHHHHHHcCCHHHHHHHHhhcccccccccccCCCC
Q 026440 4 DIDQTIKDKDLFKAAETGDSSTFKSLSKQQLLK-SLSLRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGW 82 (238)
Q Consensus 4 ~~~~~~~~~~l~~a~~~g~~~~v~~l~~~~~~~-~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~ 82 (238)
...+..+.++||+|+..|+.++|++|++.+... .++..+..|.||||+|+..|+.+++++|++.|.+ ++..+..|+
T Consensus 3 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~---~~~~~~~g~ 79 (282)
T 1oy3_D 3 GYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAG---VLVAERGGH 79 (282)
T ss_dssp CCCCTTCCCHHHHHHHTTCHHHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC---SSCCCTTSC
T ss_pred CccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC---CCCCCCCCC
Confidence 456788999999999999999999999987421 2778889999999999999999999999998887 667788999
Q ss_pred cHHHHHHHcCCHHHHHHHHHcCCC-----------------------------------------------CcccCCCCc
Q 026440 83 APIHSAASIGNVTIVEMLLSKGAD-----------------------------------------------VNLKNDGGR 115 (238)
Q Consensus 83 t~l~~a~~~~~~~~~~~Ll~~~~~-----------------------------------------------~~~~~~~~~ 115 (238)
||||+|+..++.+++++|++.+.. ++..+..|.
T Consensus 80 tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 159 (282)
T 1oy3_D 80 TALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGH 159 (282)
T ss_dssp CHHHHHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCCCTTSC
T ss_pred CHHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCc
Confidence 999999999999999999998754 455677899
Q ss_pred hHHHHHHHcCCHHHHHHHHHcCCCCCCCCCC-CCcHHHHHHhhCCHHHHHHHHhcCCCCCccccCCCcHHHHHHHhCCHH
Q 026440 116 TALHYAASKGWLKIVELLISRGAKINSKDKV-GCTALHRGASTGNSALCELLIEEGAEVDATDKAGQTPLMNAVICYNKE 194 (238)
Q Consensus 116 ~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~-~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~ 194 (238)
||||+|+..|+.+++++|+++|++++..+.. |.||||+|+..++.+++++|+++|++++.++..|.||||+|+..++.+
T Consensus 160 t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~ 239 (282)
T 1oy3_D 160 TPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNPI 239 (282)
T ss_dssp CHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTSSCHH
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCHHHHHHHcCCcH
Confidence 9999999999999999999999999998865 999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCCccCCCCCCchhhccccccch
Q 026440 195 VALLLIRHGADVDVEDKEGYTVLGRASNDFRP 226 (238)
Q Consensus 195 ~~~~Ll~~~~~~~~~~~~g~tpl~~a~~~~~~ 226 (238)
++++|+++|++++.+|..|.||+++|......
T Consensus 240 ~v~~Ll~~ga~~~~~~~~g~tpl~~a~~~~~~ 271 (282)
T 1oy3_D 240 LARLLRAHGAPEPEDGGDKLSPCSSSGSDSDS 271 (282)
T ss_dssp HHHHHHHTTCCCCCCC----------------
T ss_pred HHHHHHHcCCCcCcCCCcccccccccCCcccc
Confidence 99999999999999999999999999876543
No 7
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=5.6e-44 Score=266.98 Aligned_cols=214 Identities=27% Similarity=0.344 Sum_probs=199.0
Q ss_pred cChHHHHHHHcCChHHHHHHHHHHhhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhhcccccccccccCCCCcHHHHHH
Q 026440 10 KDKDLFKAAETGDSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAA 89 (238)
Q Consensus 10 ~~~~l~~a~~~g~~~~v~~l~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~t~l~~a~ 89 (238)
+.++||.|+..|+.+++++|++.+ .+++..+..|.||||+|+..|+.+++++|++.|.+ ++..+..|.||||+|+
T Consensus 3 g~t~L~~A~~~g~~~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~---~~~~~~~g~t~L~~A~ 77 (261)
T 2xai_A 3 DWSPMHEAAIHGHQLSLRNLISQG--WAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQ---VNGVTADWHTPLFNAC 77 (261)
T ss_dssp -CCHHHHHHHHTCHHHHHHHHHTT--CCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC---TTCCCTTSCCHHHHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHCC--CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCC---CCCCCCCCCCHHHHHH
Confidence 678999999999999999999986 57888899999999999999999999999998877 6777889999999999
Q ss_pred HcCCHHHHHHHHHcCCCCcccCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHhhCCHHHHHHHHhc
Q 026440 90 SIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELLIEE 169 (238)
Q Consensus 90 ~~~~~~~~~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~ 169 (238)
..|+.+++++|+++|++++. +..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..++.+++++|+++
T Consensus 78 ~~~~~~~v~~Ll~~g~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 156 (261)
T 2xai_A 78 VSGSWDCVNLLLQHGASVQP-ESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLES 156 (261)
T ss_dssp HHTCHHHHHHHHHTTCCSSC-SCTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHCCCCCCC-CCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHhCCHHHHHHHHHc
Confidence 99999999999999999875 44599999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccccCCCcHHHHHHHhCCHHHHHHHHhcCCCCccCCCCCCchhhccccccchHHHHHH
Q 026440 170 GAEVDATDKAGQTPLMNAVICYNKEVALLLIRHGADVDVEDKEGYTVLGRASNDFRPILIDAA 232 (238)
Q Consensus 170 ~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~~ 232 (238)
|++++. +..|.||||+|+..++.+++++|+++|++++.+|..|+||+++|+.++. +++++
T Consensus 157 g~~~~~-~~~g~t~Lh~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpl~~A~~~~~--~~~~l 216 (261)
T 2xai_A 157 GADVNQ-GKGQDSPLHAVARTASEELACLLMDFGADTQAKNAEGKRPVELVPPESP--LAQLF 216 (261)
T ss_dssp TCCTTC-CBTTBCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCGGGGSCTTCT--HHHHH
T ss_pred CCCCCC-CCCCCChHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCChhhhcccccc--HHHHH
Confidence 999995 8889999999999999999999999999999999999999999997654 44444
No 8
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.8e-45 Score=275.54 Aligned_cols=221 Identities=27% Similarity=0.393 Sum_probs=176.2
Q ss_pred ccChHHHHHHHcCChHHHHHHHHHHhh------hhcCCCCCCCchHHHHHHHcCCH-HHHHHHHhhcccccccccccCCC
Q 026440 9 IKDKDLFKAAETGDSSTFKSLSKQQLL------KSLSLRNDDDRTLLHVAASCGHP-EVVEILLSVDESANVVNAVDEEG 81 (238)
Q Consensus 9 ~~~~~l~~a~~~g~~~~v~~l~~~~~~------~~~~~~~~~~~t~L~~A~~~~~~-~~~~~Ll~~~~~~~~~~~~~~~~ 81 (238)
.+.++|+.|+.+|+.++|++|++.+.. ..++..+..+.|||+.|+..++. .++++|+..|.+ ++..+..|
T Consensus 10 ~~~~~L~~A~~~G~~~~v~~LL~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~Gad---vn~~d~~G 86 (269)
T 4b93_B 10 REVEKLLRAVADGDLEMVRYLLEWTEEDLEDAEDTVSAADPEFCHPLCQCPKCAPAQKRLAKVPASGLG---VNVTSQDG 86 (269)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHTCC----------------------------------------CCCC---TTCCCTTS
T ss_pred cchhHHHHHHHcCCHHHHHHHHHCCCcccccccccccccCccCCCHHHHHHHhCCHHHHHHHHHHCCCC---CCCcCCCC
Confidence 345689999999999999999976521 23456677899999999988776 478999988877 67788999
Q ss_pred CcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHhhCCHH
Q 026440 82 WAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSA 161 (238)
Q Consensus 82 ~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~ 161 (238)
+||||+|+..|+.+++++|++.|++++..+..|.||++.|+..++.+++++|++.|++++..|..|.||||+|+..|+.+
T Consensus 87 ~TpLh~A~~~g~~~~v~~Ll~~~a~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n~~d~~g~TpL~~A~~~g~~~ 166 (269)
T 4b93_B 87 SSPLHVAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGHFQVVKCLLDSNAKPNKKDLSGNTPLIYACSGGHHE 166 (269)
T ss_dssp CCHHHHHHHTTCTTHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCGG
T ss_pred CCHHHHHHHcCcHHHHHHHHhcCCCcCccCCCCCCccccccccChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCCCccccCCCcHHHHHHHhCCHHHHHHHHhcCCCCccCCCCCCchhhccccccchHHHHHHHH
Q 026440 162 LCELLIEEGAEVDATDKAGQTPLMNAVICYNKEVALLLIRHGADVDVEDKEGYTVLGRASNDFRPILIDAAKA 234 (238)
Q Consensus 162 ~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~~~~ 234 (238)
++++|+++|++++.++..|.||||+|+..|+.+++++|+++|++++.+|.+|+|||++|+++++ ++++++.
T Consensus 167 ~v~~Ll~~gadvn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~~~--i~~lL~~ 237 (269)
T 4b93_B 167 LVALLLQHGASINASNNKGNTALHEAVIEKHVFVVELLLLHGASVQVLNKRQRTAVDCAEQNSK--IMELLQV 237 (269)
T ss_dssp GHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCSGGGSCTTCH--HHHHTTC
T ss_pred HHHHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHhCCc--HHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999998775 4554443
No 9
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=1.1e-43 Score=268.48 Aligned_cols=220 Identities=27% Similarity=0.344 Sum_probs=202.6
Q ss_pred hhhccChHHHHHHHcCChHHHHHHHHHHhhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhhcccccccccccCCCCcHH
Q 026440 6 DQTIKDKDLFKAAETGDSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPI 85 (238)
Q Consensus 6 ~~~~~~~~l~~a~~~g~~~~v~~l~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~t~l 85 (238)
.+..+.++||+|+..|+.+++++|++.+ .+++..+..|.||||+|+..|+.+++++|++.+.+ ++..+..|.|||
T Consensus 55 ~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~---~~~~~~~g~t~L 129 (285)
T 3d9h_A 55 DAVSDWSPMHEAAIHGHQLSLRNLISQG--WAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQ---VNGVTADWHTPL 129 (285)
T ss_dssp SSCCSCCHHHHHHHTTCHHHHHHHHHTT--CCSCEECTTCCCHHHHHHHTTCHHHHHHHHHTTCC---SSCCCTTCCCHH
T ss_pred CCccCCCHHHHHHHcCCHHHHHHHHHCC--CCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCC---CCCCCCCCCCHH
Confidence 4556778999999999999999999986 56888899999999999999999999999998877 677788999999
Q ss_pred HHHHHcCCHHHHHHHHHcCCCCcccCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHhhCCHHHHHH
Q 026440 86 HSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCEL 165 (238)
Q Consensus 86 ~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ 165 (238)
++|+..++.+++++|++.|++++..+ .|.|||++|+..|+.+++++|++.|++++..+..|.||||+|+..++.+++++
T Consensus 130 ~~A~~~~~~~~v~~Ll~~g~~~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~ 208 (285)
T 3d9h_A 130 FNACVSGSWDCVNLLLQHGASVQPES-DLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKK 208 (285)
T ss_dssp HHHHHHTCHHHHHHHHHTTCCSSCSC-TTSCHHHHHHHHTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHH
T ss_pred HHHHHcCHHHHHHHHHHCCCCCCCCC-CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHH
Confidence 99999999999999999999987544 59999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCCCCccccCCCcHHHHHHHhCCHHHHHHHHhcCCCCccCCCCCCchhhccccccchHHHHHHHH
Q 026440 166 LIEEGAEVDATDKAGQTPLMNAVICYNKEVALLLIRHGADVDVEDKEGYTVLGRASNDFRPILIDAAKA 234 (238)
Q Consensus 166 Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~~~~ 234 (238)
|++.|++++. +..|.||||+|+..++.+++++|+++|++++.+|..|+||+++|+.+ .+++++|..
T Consensus 209 Ll~~ga~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~~--~~~~~~Ll~ 274 (285)
T 3d9h_A 209 LLESGADVNQ-GKGQDSPLHAVVRTASEELACLLMDFGADTQAKNAEGKRPVELVPPE--SPLAQLFLE 274 (285)
T ss_dssp HHHTTCCTTC-CBTTBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGSCTT--SHHHHHHHH
T ss_pred HHHCCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHhcCc--cHHHHHHHH
Confidence 9999999994 88899999999999999999999999999999999999999999954 456655543
No 10
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=100.00 E-value=2.9e-44 Score=280.69 Aligned_cols=225 Identities=25% Similarity=0.316 Sum_probs=208.0
Q ss_pred cchhhhccChHHHHHHHcCChHHHHHHHHHHhhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhhcccccccccccCCCC
Q 026440 3 MDIDQTIKDKDLFKAAETGDSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGW 82 (238)
Q Consensus 3 ~~~~~~~~~~~l~~a~~~g~~~~v~~l~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~ 82 (238)
.+..+..+.++||+|+..|+.++|++|++.+ .+++..+..|.||||+|+..|+.+++++|++.+... .+..|.
T Consensus 13 ~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g--~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-----~~~~g~ 85 (364)
T 3ljn_A 13 RIKSDDENMEKIHVAARKGQTDEVRRLIETG--VSPTIQNRFGCTALHLACKFGCVDTAKYLASVGEVH-----SLWHGQ 85 (364)
T ss_dssp ---CCHHHHHHHHHHHHHTCHHHHHHHHHTT--CCTTCCCTTCCCHHHHHHHHCCHHHHHHHHHHCCCC-----CCBTTB
T ss_pred ccccCCCCCCHHHHHHHcCCHHHHHHHHHcC--CCccccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCc-----cccCCC
Confidence 3455677889999999999999999999886 578888999999999999999999999999988742 235899
Q ss_pred cHHHHHHHcCCHHHHHHHHHc----CCCCcc-----------------cCCCCchHHHHHHHcC--CHHHHHHHHHcCCC
Q 026440 83 APIHSAASIGNVTIVEMLLSK----GADVNL-----------------KNDGGRTALHYAASKG--WLKIVELLISRGAK 139 (238)
Q Consensus 83 t~l~~a~~~~~~~~~~~Ll~~----~~~~~~-----------------~~~~~~~~l~~a~~~~--~~~~~~~l~~~~~~ 139 (238)
||||+|+..|+.+++++|++. |.+++. .+..|.||||+|+..| +.+++++|++.|++
T Consensus 86 t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~ 165 (364)
T 3ljn_A 86 KPIHLAVMANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGAS 165 (364)
T ss_dssp CHHHHHHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCC
T ss_pred CHHHHHHHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCC
Confidence 999999999999999999998 777776 7788999999999999 99999999999999
Q ss_pred CCCCCCCCCcHHHHHHhhCCHHHHHHHHhcCCC-----CCccccCCCcHHHHHHHhCCHHHHHHHHhcCCCCccCCCCCC
Q 026440 140 INSKDKVGCTALHRGASTGNSALCELLIEEGAE-----VDATDKAGQTPLMNAVICYNKEVALLLIRHGADVDVEDKEGY 214 (238)
Q Consensus 140 ~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~-----~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~ 214 (238)
++..+..|.||||+|+..|+.+++++|+++|++ ++..+..|.||||+|+..|+.+++++|+++|++++.+|..|.
T Consensus 166 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~~~~d~~g~ 245 (364)
T 3ljn_A 166 PTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINWEDVAMRFVEMGIDVNMEDNEHT 245 (364)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTTCCTTCCCTTSC
T ss_pred CcccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCC
Confidence 999999999999999999999999999999988 999999999999999999999999999999999999999999
Q ss_pred chhhccccccchHHHHHHHH
Q 026440 215 TVLGRASNDFRPILIDAAKA 234 (238)
Q Consensus 215 tpl~~a~~~~~~~~~~~~~~ 234 (238)
|||++|+..++.+++++|..
T Consensus 246 tpL~~A~~~g~~~~v~~Ll~ 265 (364)
T 3ljn_A 246 VPLYLSVRAAMVLLTKELLQ 265 (364)
T ss_dssp CHHHHHHHTCCHHHHHHHHH
T ss_pred CHHHHHHHhChHHHHHHHHH
Confidence 99999999999888888765
No 11
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=5.7e-43 Score=264.32 Aligned_cols=223 Identities=27% Similarity=0.379 Sum_probs=194.4
Q ss_pred hhccChHHHHHHHcCChHHHHHHHHHHhhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhhcccccccccccCCCCcHHH
Q 026440 7 QTIKDKDLFKAAETGDSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIH 86 (238)
Q Consensus 7 ~~~~~~~l~~a~~~g~~~~v~~l~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~t~l~ 86 (238)
+..+.++||+|+..|+.+++++|++.+ .+++..+..|.||||+|+..|+.+++++|++.+.+ ++..+..|.|||+
T Consensus 36 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~---~~~~~~~g~t~L~ 110 (285)
T 1wdy_A 36 EEGGWTPLHNAVQMSREDIVELLLRHG--ADPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGAD---VNECDFYGFTAFM 110 (285)
T ss_dssp TTTCCCHHHHHHHTTCHHHHHHHHHTT--CCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC---TTCBCTTCCBHHH
T ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHcC--CCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC---CCccCcccCCHHH
Confidence 455677899999999999999998876 45677788889999999999999999999987766 5666788899999
Q ss_pred HHHHcCCHHHHHHHHHcCCCCccc----------CCCCchHHHHHHHcCCHHHHHHHHHc-CCCCCCCCCCCCcHHHHHH
Q 026440 87 SAASIGNVTIVEMLLSKGADVNLK----------NDGGRTALHYAASKGWLKIVELLISR-GAKINSKDKVGCTALHRGA 155 (238)
Q Consensus 87 ~a~~~~~~~~~~~Ll~~~~~~~~~----------~~~~~~~l~~a~~~~~~~~~~~l~~~-~~~~~~~~~~~~t~l~~a~ 155 (238)
+|+..++.+++++|++.|++++.. +..|.|||+.|+..|+.+++++|++. |.+++..+..|.||+|.|+
T Consensus 111 ~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~ 190 (285)
T 1wdy_A 111 EAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHAL 190 (285)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHH
T ss_pred HHHHhCCHHHHHHHHHhCCCcccccccHHHHHhhccCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCHHHHHH
Confidence 999999999999999998888766 66788999999999999999999987 8889888888999999999
Q ss_pred hhCC----HHHHHHHHhcCCCCCccccCCCcHHHHHHHhCCHHHHHHHHh-cCCCCccCCCCCCchhhccccccchHHHH
Q 026440 156 STGN----SALCELLIEEGAEVDATDKAGQTPLMNAVICYNKEVALLLIR-HGADVDVEDKEGYTVLGRASNDFRPILID 230 (238)
Q Consensus 156 ~~~~----~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~-~~~~~~~~~~~g~tpl~~a~~~~~~~~~~ 230 (238)
..++ .+++++|+++|++++.++..|.||||+|+..++.+++++|++ .|++++.+|..|.||+++|+..++.++++
T Consensus 191 ~~~~~~~~~~i~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~~~~g~t~l~~A~~~~~~~i~~ 270 (285)
T 1wdy_A 191 LSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAE 270 (285)
T ss_dssp HCSCTTTHHHHHHHHHHTTCCSSCCCTTSCCHHHHHHHTTCHHHHHHHHHSSSCCTTCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred HccccchHHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhccCCCccccCCCCCcHHHHHHHcCcHHHHH
Confidence 9888 889999999999999999999999999999999999999998 79999999999999999999999988887
Q ss_pred HHHH
Q 026440 231 AAKA 234 (238)
Q Consensus 231 ~~~~ 234 (238)
+|..
T Consensus 271 ~Ll~ 274 (285)
T 1wdy_A 271 LLCK 274 (285)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7754
No 12
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=100.00 E-value=6e-43 Score=258.00 Aligned_cols=228 Identities=26% Similarity=0.318 Sum_probs=210.3
Q ss_pred chhhhccChHHHHHHHcCChHHHHHHHHHHhhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhhcccccccccccCCCCc
Q 026440 4 DIDQTIKDKDLFKAAETGDSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWA 83 (238)
Q Consensus 4 ~~~~~~~~~~l~~a~~~g~~~~v~~l~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~t 83 (238)
+..+..+.++|+.|+..|+.+++++|++.+ .+++..+..|.||||+|+..|+.+++++|++.+.... ...+..|.|
T Consensus 3 ~~~d~~~~~~l~~A~~~g~~~~~~~Ll~~g--~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~--~~~~~~~~t 78 (240)
T 3eu9_A 3 THIDDYSTWDIVKATQYGIYERCRELVEAG--YDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVD--QLGGDLNST 78 (240)
T ss_dssp CCCSCGGGCCHHHHHHTTCHHHHHHHHHTT--CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT--CCBTTTTBC
T ss_pred cccccccchHHHHHHHcCChHHHHHHHHcC--CCcCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcch--hhcCCcCCC
Confidence 445677888999999999999999999987 5677888999999999999999999999999876632 233456999
Q ss_pred HHHHHHHcCCHHHHHHHHHcCCCCcccCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHhhCC-HHH
Q 026440 84 PIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGN-SAL 162 (238)
Q Consensus 84 ~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~-~~~ 162 (238)
||++|+..++.+++++|++.|++++..+..|.|||++|+..|+.+++++|+++|++++..+..|.||+|.|+..+. .++
T Consensus 79 ~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~ 158 (240)
T 3eu9_A 79 PLHWATRQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDP 158 (240)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCSSTT
T ss_pred hhHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCChHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999997776 899
Q ss_pred HHHHHhcCCCCCcccc-CCCcHHHHHHHhCCHHHHHHHHhcCCCCccCCCCCCchhhccccccchHHHHHHHHH
Q 026440 163 CELLIEEGAEVDATDK-AGQTPLMNAVICYNKEVALLLIRHGADVDVEDKEGYTVLGRASNDFRPILIDAAKAM 235 (238)
Q Consensus 163 ~~~Ll~~~~~~~~~~~-~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~~~~~ 235 (238)
+++|++.|++++..+. .|.||||+|+..++.+++++|+++|++++.+|..|.||+++|+..++.+++++|.+-
T Consensus 159 ~~~L~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~L~~~ 232 (240)
T 3eu9_A 159 TRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVDAQNIKGESALDLAKQRKNVWMINHLQEA 232 (240)
T ss_dssp HHHHHHTTCCTTCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHhcCCCcchhhccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHh
Confidence 9999999999999887 899999999999999999999999999999999999999999999999999888753
No 13
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=4.8e-43 Score=280.06 Aligned_cols=225 Identities=30% Similarity=0.368 Sum_probs=183.3
Q ss_pred hhccChHHHHHHHcCChHHHHHHHHHHhhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhhcccccccccccCCCCcHHH
Q 026440 7 QTIKDKDLFKAAETGDSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIH 86 (238)
Q Consensus 7 ~~~~~~~l~~a~~~g~~~~v~~l~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~t~l~ 86 (238)
+..+.++|+.|+..|+.+++++|++.+ .+.+..+..|.||||+|+..|+.+++++|++.+.. .+..+..|.|||+
T Consensus 176 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~---~~~~~~~g~t~L~ 250 (437)
T 1n11_A 176 GKNGLTPLHVAVHHNNLDIVKLLLPRG--GSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGS---ANAESVQGVTPLH 250 (437)
T ss_dssp CSSCCCHHHHHHHTTCHHHHHHHGGGT--CCSCCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC---TTCCCTTCCCHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHhCC--CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC---CCCCCCCCCCHHH
Confidence 344555666666666666666666554 23445555666677777777777777777766555 4556677888888
Q ss_pred HHHHcCCHHHHHHHHHcCCCCcccCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHhhCCHHHHHHH
Q 026440 87 SAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELL 166 (238)
Q Consensus 87 ~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L 166 (238)
+|+..|+.+++++|++.+++++..+..|.|||++|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|
T Consensus 251 ~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~L 330 (437)
T 1n11_A 251 LAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHYGNIKLVKFL 330 (437)
T ss_dssp HHHHTTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCSSCCCHHHHHHHSSCSHHHHHH
T ss_pred HHHHCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCccCCCCCCCCCCHHHHHHHcCcHHHHHHH
Confidence 88888888888888888888888888888899999988999999999999998888888899999999999999999999
Q ss_pred HhcCCCCCccccCCCcHHHHHHHhCCHHHHHHHHhcCCCCccCCCCCCchhhccccccchHHHHHHHHHh
Q 026440 167 IEEGAEVDATDKAGQTPLMNAVICYNKEVALLLIRHGADVDVEDKEGYTVLGRASNDFRPILIDAAKAML 236 (238)
Q Consensus 167 l~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~~~~~~ 236 (238)
+++|++++.++..|.||||+|+..++.+++++|+++|++++.+|..|.||+++|.+.++.+++++++.+.
T Consensus 331 l~~gad~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~l~~A~~~g~~~~~~~l~~~~ 400 (437)
T 1n11_A 331 LQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPLAIAKRLGYISVTDVLKVVT 400 (437)
T ss_dssp HHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCSSSCCHHHHHHHTTCHHHHHHHHHHC
T ss_pred HhcCCCCCCCCCCCCCHHHHHHHCChHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHhcc
Confidence 9999999999999999999999999999999999999999999999999999999999999999888654
No 14
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=100.00 E-value=3.7e-43 Score=272.86 Aligned_cols=222 Identities=31% Similarity=0.374 Sum_probs=122.7
Q ss_pred hhccChHHHHHHHcCChHHHHHHHHHHhhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhhcccccccccccCCCCcHHH
Q 026440 7 QTIKDKDLFKAAETGDSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIH 86 (238)
Q Consensus 7 ~~~~~~~l~~a~~~g~~~~v~~l~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~t~l~ 86 (238)
+..+.+.|+.|+..|+.+.+++++... +.+++..+..|.||||+|+..|+.+++++|++.|.+ ++..+..|.||||
T Consensus 21 ~~~~~~~L~~A~~~g~~~~v~~ll~~~-~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~---~~~~~~~g~t~L~ 96 (351)
T 3utm_A 21 GEYKKDELLEAARSGNEEKLMALLTPL-NVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGAD---VHAKDKGGLVPLH 96 (351)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHCCTT-TTTCCCSSTTCCCHHHHHHHTTCHHHHHHHHHTTCC---TTCCCTTCCCHHH
T ss_pred ccccchhHHHHHHcCCHHHHHHHHHhc-CCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC---CCccCCCCCcHHH
Confidence 444555566666666666666555543 334455555566666666666666666666655544 4444555566666
Q ss_pred HHHHcCCHHHHHHHHHcCCCCcccCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCC----------------------
Q 026440 87 SAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKD---------------------- 144 (238)
Q Consensus 87 ~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~---------------------- 144 (238)
+|+..|+.+++++|+++|++++..+..|.|||++|+..|+.+++++|+++|++++..+
T Consensus 97 ~A~~~g~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~~~~~~~~~~ 176 (351)
T 3utm_A 97 NACSYGHYEVTELLLKHGACVNAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYE 176 (351)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCSSHHHHHHHHHH
T ss_pred HHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcchHHHhhhhhHHHHHhh
Confidence 6666666666666666665555555555666666666666666666655555544322
Q ss_pred --------------------------------CCCCcHHHHHHhh---CCHHHHHHHHhcCCCCCccccCCCcHHHHHHH
Q 026440 145 --------------------------------KVGCTALHRGAST---GNSALCELLIEEGAEVDATDKAGQTPLMNAVI 189 (238)
Q Consensus 145 --------------------------------~~~~t~l~~a~~~---~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~ 189 (238)
..+.||+|.|+.. +..+++++|++.|++++.++..|.||||+|+.
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~ 256 (351)
T 3utm_A 177 FKGHSLLQAAREADLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQVAELLLRKGANVNEKNKDFMTPLHVAAE 256 (351)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHTTTCCTTCCCTTTCCCHHHHHHHCCSTTHHHHHHHHHHTTCCTTCCCTTCCCHHHHHHH
T ss_pred hcccHHHHHHHhccHHHHHHHHHhhcccccCCCCCCCHHHHHHHHhCccHHHHHHHHHHcCCCcCCcCCCCCCHHHHHHH
Confidence 2234555555554 33455555555555555555555555555555
Q ss_pred hCCHHHHHHHHhcCCCCccCCCCCCchhhccccccchHHHHHH
Q 026440 190 CYNKEVALLLIRHGADVDVEDKEGYTVLGRASNDFRPILIDAA 232 (238)
Q Consensus 190 ~~~~~~~~~Ll~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~~ 232 (238)
.++.+++++|+++|++++.+|..|+||||+|+..++.+++++|
T Consensus 257 ~g~~~~v~~Ll~~ga~~n~~d~~g~t~L~~A~~~~~~~~v~~L 299 (351)
T 3utm_A 257 RAHNDVMEVLHKHGAKMNALDSLGQTALHRAALAGHLQTCRLL 299 (351)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred cCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHH
Confidence 5555555555555555555555555555555555554444443
No 15
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=100.00 E-value=1.5e-43 Score=277.24 Aligned_cols=229 Identities=23% Similarity=0.278 Sum_probs=209.1
Q ss_pred cchhh-hccChHHHHHHHcCChHHHHHHHHH------HhhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhhcccccccc
Q 026440 3 MDIDQ-TIKDKDLFKAAETGDSSTFKSLSKQ------QLLKSLSLRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVN 75 (238)
Q Consensus 3 ~~~~~-~~~~~~l~~a~~~g~~~~v~~l~~~------~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~ 75 (238)
++..+ ..+.++||+|+..|+.+++++|+.. ..+.+++..+..|.||||+|+..|+.+++++|++.|.+ ++
T Consensus 117 ~n~~d~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~ga~vn~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~---~~ 193 (373)
T 2fo1_E 117 VNIIDPRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGAD---PT 193 (373)
T ss_dssp TTTCCCSSCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC---SC
T ss_pred ccccCCcCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHhcCCCCcCCCCCCCCHHHHHHHcChHHHHHHHHHCCCC---Cc
Confidence 34444 5788999999999999999999853 12457888899999999999999999999999998887 56
Q ss_pred cccCCCCcHHHHHHHcCCHHHHHHHHHcC---CCCcccCCCCchHHHHHHHcC---CHHHHHHHHHcCCCCCC-------
Q 026440 76 AVDEEGWAPIHSAASIGNVTIVEMLLSKG---ADVNLKNDGGRTALHYAASKG---WLKIVELLISRGAKINS------- 142 (238)
Q Consensus 76 ~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~---~~~~~~~~~~~~~l~~a~~~~---~~~~~~~l~~~~~~~~~------- 142 (238)
..+..|.||||+|+..|+.+++++|++.+ .+++..+..|.|||++|+..+ +.+++++|++.|++++.
T Consensus 194 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~ 273 (373)
T 2fo1_E 194 IYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKD 273 (373)
T ss_dssp CCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTS
T ss_pred ccCCCCCCHHHHHHHCCCHHHHHHHHhcCccccChhhcCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccC
Confidence 67889999999999999999999999987 788888999999999999988 89999999999999886
Q ss_pred -CCCCCCcHHHHHHhhCCHHHHHHHHhcC-CCCCccccCCCcHHHHHHHhCCHHHHHHHHhcCCCCccCCCCCCchhhcc
Q 026440 143 -KDKVGCTALHRGASTGNSALCELLIEEG-AEVDATDKAGQTPLMNAVICYNKEVALLLIRHGADVDVEDKEGYTVLGRA 220 (238)
Q Consensus 143 -~~~~~~t~l~~a~~~~~~~~~~~Ll~~~-~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpl~~a 220 (238)
.+..|.||||+|+..|+.+++++|++++ ++++.++..|.||||+|+..|+.+++++|+++|++++.+|..|.||+++|
T Consensus 274 ~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~l~~A 353 (373)
T 2fo1_E 274 SEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQLA 353 (373)
T ss_dssp SSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCSSSCCHHHHH
T ss_pred cccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccCCCCCCCCHHHHH
Confidence 5668999999999999999999999885 99999999999999999999999999999999999999999999999999
Q ss_pred ccccchHHHHHHHH
Q 026440 221 SNDFRPILIDAAKA 234 (238)
Q Consensus 221 ~~~~~~~~~~~~~~ 234 (238)
+..++.+++++|..
T Consensus 354 ~~~g~~~iv~~Ll~ 367 (373)
T 2fo1_E 354 QANNHHNIVDIFDR 367 (373)
T ss_dssp HHTTCHHHHHHHHT
T ss_pred HHcCCHHHHHHHHh
Confidence 99999888888754
No 16
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=100.00 E-value=3.8e-42 Score=267.12 Aligned_cols=224 Identities=30% Similarity=0.397 Sum_probs=203.5
Q ss_pred ccchhhhccChHHHHHHHcCChHHHHHHHHHHhhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhhcccccccccccCCC
Q 026440 2 DMDIDQTIKDKDLFKAAETGDSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEG 81 (238)
Q Consensus 2 ~~~~~~~~~~~~l~~a~~~g~~~~v~~l~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~ 81 (238)
+++..+..+.++||+|+..|+.+++++|++.+ .+++..+..|.||||+|+..|+.+++++|++.+.+ ++..+..|
T Consensus 50 ~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~---~~~~~~~g 124 (351)
T 3utm_A 50 NCHASDGRKSTPLHLAAGYNRVRIVQLLLQHG--ADVHAKDKGGLVPLHNACSYGHYEVTELLLKHGAC---VNAMDLWQ 124 (351)
T ss_dssp TCCCSSTTCCCHHHHHHHTTCHHHHHHHHHTT--CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC---TTCCCTTC
T ss_pred CcccCCCCCCCHHHHHHHcCCHHHHHHHHHcC--CCCCccCCCCCcHHHHHHHCCCHHHHHHHHHCCCC---CCCCCCCC
Confidence 34456677889999999999999999999986 57888899999999999999999999999998877 66778899
Q ss_pred CcHHHHHHHcCCHHHHHHHHHcCCCCcccC--------------------------------------------------
Q 026440 82 WAPIHSAASIGNVTIVEMLLSKGADVNLKN-------------------------------------------------- 111 (238)
Q Consensus 82 ~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~-------------------------------------------------- 111 (238)
.||||+|+..++.+++++|+++|++++..+
T Consensus 125 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 204 (351)
T 3utm_A 125 FTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIIN 204 (351)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTT
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcchHHHhhhhhHHHHHhhhcccHHHHHHHhccHHHHHHHHHhhccc
Confidence 999999999999999999999998876543
Q ss_pred ----CCCchHHHHHHHc---CCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHhhCCHHHHHHHHhcCCCCCccccCCCcHH
Q 026440 112 ----DGGRTALHYAASK---GWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELLIEEGAEVDATDKAGQTPL 184 (238)
Q Consensus 112 ----~~~~~~l~~a~~~---~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l 184 (238)
..|.||||+|+.. +..+++++|++.|++++..+..|.||||+|+..++.+++++|+++|++++.++..|.|||
T Consensus 205 ~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~t~L 284 (351)
T 3utm_A 205 FKQPQSHETALHCAVASLHPKRKQVAELLLRKGANVNEKNKDFMTPLHVAAERAHNDVMEVLHKHGAKMNALDSLGQTAL 284 (351)
T ss_dssp CCCTTTCCCHHHHHHHCCSTTHHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHH
T ss_pred ccCCCCCCCHHHHHHHHhCccHHHHHHHHHHcCCCcCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHH
Confidence 4567999999998 558999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCHHHHHHHHhcCCCCccCCCCCCchhhccccccchHHHHHHHH
Q 026440 185 MNAVICYNKEVALLLIRHGADVDVEDKEGYTVLGRASNDFRPILIDAAKA 234 (238)
Q Consensus 185 ~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~~~~ 234 (238)
|+|+..++.+++++|+++|++++.+|..|.||+++|.. ++.+++.+
T Consensus 285 ~~A~~~~~~~~v~~Ll~~gad~~~~~~~g~tal~~a~~----~~~~~l~~ 330 (351)
T 3utm_A 285 HRAALAGHLQTCRLLLSYGSDPSIISLQGFTAAQMGNE----AVQQILSE 330 (351)
T ss_dssp HHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHSCH----HHHHHHHH
T ss_pred HHHHHcCcHHHHHHHHHcCCCCCCcCCCCCChhhhhhH----HHHHHHHh
Confidence 99999999999999999999999999999999999943 45555544
No 17
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=5.8e-42 Score=258.80 Aligned_cols=221 Identities=31% Similarity=0.425 Sum_probs=205.8
Q ss_pred ccChHHHHHHHcCChHHHHHHHHHHhhhhcCCC-CCCCchHHHHHHHcCCHHHHHHHHhhcccccccccccCCCCcHHHH
Q 026440 9 IKDKDLFKAAETGDSSTFKSLSKQQLLKSLSLR-NDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHS 87 (238)
Q Consensus 9 ~~~~~l~~a~~~g~~~~v~~l~~~~~~~~~~~~-~~~~~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~t~l~~ 87 (238)
.+.+.|+.|+..|+.+++++|++.+ .+++.. +..|.||||+|+..|+.+++++|++.+.+ ++..+..|.||||+
T Consensus 4 ~g~~~L~~A~~~g~~~~v~~Ll~~g--~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~---~~~~~~~g~t~L~~ 78 (285)
T 1wdy_A 4 EDNHLLIKAVQNEDVDLVQQLLEGG--ANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGAD---PVLRKKNGATPFLL 78 (285)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHTT--CCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCC---TTCCCTTCCCHHHH
T ss_pred ccchHHHHHHHcCCHHHHHHHHHcC--CCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC---CcccCCCCCCHHHH
Confidence 4567899999999999999999987 355555 77899999999999999999999998877 56678899999999
Q ss_pred HHHcCCHHHHHHHHHcCCCCcccCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCC----------CCCCCcHHHHHHhh
Q 026440 88 AASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSK----------DKVGCTALHRGAST 157 (238)
Q Consensus 88 a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~----------~~~~~t~l~~a~~~ 157 (238)
|+..|+.+++++|+++|++++..+..|.|||++|+..|+.+++++|++.|++++.. +..|.||||.|+..
T Consensus 79 A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~ 158 (285)
T 1wdy_A 79 AAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEK 158 (285)
T ss_dssp HHHHTCHHHHHHHHHTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHcCCCCCccCcccCCHHHHHHHhCCHHHHHHHHHhCCCcccccccHHHHHhhccCCCcHHHHHHHc
Confidence 99999999999999999999999999999999999999999999999999999876 67799999999999
Q ss_pred CCHHHHHHHHhc-CCCCCccccCCCcHHHHHHHhCC----HHHHHHHHhcCCCCccCCCCCCchhhccccccchHHHHHH
Q 026440 158 GNSALCELLIEE-GAEVDATDKAGQTPLMNAVICYN----KEVALLLIRHGADVDVEDKEGYTVLGRASNDFRPILIDAA 232 (238)
Q Consensus 158 ~~~~~~~~Ll~~-~~~~~~~~~~~~t~l~~a~~~~~----~~~~~~Ll~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~~ 232 (238)
++.+++++|++. |++++..+..|.||||+|+..++ .+++++|+++|++++.+|..|.||||+|+..++.+++++|
T Consensus 159 ~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~L 238 (285)
T 1wdy_A 159 GHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRL 238 (285)
T ss_dssp TCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSSCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred CCHHHHHHHHHhcCCCCCccCCCCCCHHHHHHHccccchHHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHH
Confidence 999999999998 99999999999999999999999 9999999999999999999999999999999998887776
Q ss_pred HH
Q 026440 233 KA 234 (238)
Q Consensus 233 ~~ 234 (238)
..
T Consensus 239 l~ 240 (285)
T 1wdy_A 239 LE 240 (285)
T ss_dssp HH
T ss_pred Hh
Confidence 54
No 18
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=100.00 E-value=5.1e-43 Score=255.89 Aligned_cols=211 Identities=24% Similarity=0.301 Sum_probs=186.9
Q ss_pred cCChHHHHHHHHHHhhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhhcccccccccccCCCCcHHHHHHHcCCHHHHHH
Q 026440 20 TGDSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIGNVTIVEM 99 (238)
Q Consensus 20 ~g~~~~v~~l~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ 99 (238)
.|+.+++++|++.+. ......+..|.||||+|+..|+.+++++|++.+.+ ++..+..|.||||+|+..++.+++++
T Consensus 1 gg~~~~i~~Ll~~g~-~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~---~~~~~~~g~t~L~~A~~~~~~~~v~~ 76 (223)
T 2f8y_A 1 GDAPAVISDFIYQGA-SLHNQTDRTGETALHLAARYSRSDAAKRLLEASAD---ANIQDNMGRTPLHAAVSADAQGVFQI 76 (223)
T ss_dssp ----CCEETTEETTC-CTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCC---TTCCCTTSCCHHHHHHHTTCHHHHHH
T ss_pred CCcHHHHHHHHHcCC-CcccccCCCCCchHHHHHHcCCHHHHHHHHHcCCC---CCCcCCCCCCHHHHHHHcCCHHHHHH
Confidence 367888888888762 22234478899999999999999999999988776 56678899999999999999999999
Q ss_pred HHHcCC-CCcccCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHhhCCHHHHHHHHhcCCCCCcccc
Q 026440 100 LLSKGA-DVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELLIEEGAEVDATDK 178 (238)
Q Consensus 100 Ll~~~~-~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~ 178 (238)
|++.+. +++..+..|.|||++|+..++.+++++|++.|++++..+..|.||||+|+..++.+++++|+++|++++.++.
T Consensus 77 Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~ 156 (223)
T 2f8y_A 77 LIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNN 156 (223)
T ss_dssp HHHBTTSCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred HHHcCCCCcccCCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCcCcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCC
Confidence 999886 7788888999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcHHHHHHHhCCHHHHHHHHhcCCCCccCCCCCCchhhccccccchHHHHHHHH
Q 026440 179 AGQTPLMNAVICYNKEVALLLIRHGADVDVEDKEGYTVLGRASNDFRPILIDAAKA 234 (238)
Q Consensus 179 ~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~~~~ 234 (238)
.|.||||+|+..++.+++++|+++|++++.+|..|.||+++|+..++.+++++|..
T Consensus 157 ~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L~~ 212 (223)
T 2f8y_A 157 REETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLLDE 212 (223)
T ss_dssp TCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHH
T ss_pred CCcCHHHHHHHcCCHHHHHHHHHcCCCCccccccCCCHHHHHHHhcchHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999888888764
No 19
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=100.00 E-value=1.3e-42 Score=264.44 Aligned_cols=220 Identities=30% Similarity=0.428 Sum_probs=197.1
Q ss_pred ccChHHHHHHHcCChHHHHHHHHHHhhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhhcccccccccccCCCCcHHHHH
Q 026440 9 IKDKDLFKAAETGDSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSA 88 (238)
Q Consensus 9 ~~~~~l~~a~~~g~~~~v~~l~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~t~l~~a 88 (238)
.+.+.|+.|+..|+.++|++|++.+ .+++..+..|.||||+|+..|+.+++++|++.|.+ ++..+..|.||||+|
T Consensus 39 ~~~t~l~~A~~~g~~~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~---~~~~~~~g~tpL~~A 113 (299)
T 1s70_B 39 DDGAVFLAACSSGDTEEVLRLLERG--ADINYANVDGLTALHQACIDDNVDMVKFLVENGAN---INQPDNEGWIPLHAA 113 (299)
T ss_dssp CHHHHHHHHHHHTCHHHHHHHHHHC--CCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCC---TTCCCTTSCCHHHHH
T ss_pred CCccHHHHHHHcCCHHHHHHHHHcC--CCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCC---CCCCCCCCCcHHHHH
Confidence 3457899999999999999999987 56788899999999999999999999999998877 677788999999999
Q ss_pred HHcCCHHHHHHHHHcCCCCcccCCCCchHHHHHHHcCCHHHHHHHHHc-CCCCC--------------------------
Q 026440 89 ASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISR-GAKIN-------------------------- 141 (238)
Q Consensus 89 ~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~-~~~~~-------------------------- 141 (238)
+..|+.+++++|+++|++++..+..|.|||++|+..++.+++++++.. +.+++
T Consensus 114 ~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 193 (299)
T 1s70_B 114 ASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDV 193 (299)
T ss_dssp HHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCC
T ss_pred HHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchh
Confidence 999999999999999999999999999999999999998988877653 33322
Q ss_pred CCCCCCCcHHHHHHhhCCHHHHHHHHhcCCCCCccccCCCcHHHHHHHhCCHHHHHHHHhcCCCCccCCCCCCchhhccc
Q 026440 142 SKDKVGCTALHRGASTGNSALCELLIEEGAEVDATDKAGQTPLMNAVICYNKEVALLLIRHGADVDVEDKEGYTVLGRAS 221 (238)
Q Consensus 142 ~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpl~~a~ 221 (238)
..+..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|++++.+|..|.||+++|.
T Consensus 194 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~ 273 (299)
T 1s70_B 194 RHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVAD 273 (299)
T ss_dssp CCTTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTTTSCC
T ss_pred hhcCCCCCHHHHHHHCCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHH
Confidence 24567999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred cccchHHHHHHH
Q 026440 222 NDFRPILIDAAK 233 (238)
Q Consensus 222 ~~~~~~~~~~~~ 233 (238)
+.....+.++++
T Consensus 274 ~~~~~~l~~l~~ 285 (299)
T 1s70_B 274 EDILGYLEELQK 285 (299)
T ss_dssp SGGGHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 765444444433
No 20
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=3.5e-42 Score=260.26 Aligned_cols=223 Identities=23% Similarity=0.239 Sum_probs=181.7
Q ss_pred hhccChHHHHHHHcCChHHHHHHHHHHh---------hhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhhcccccccccc
Q 026440 7 QTIKDKDLFKAAETGDSSTFKSLSKQQL---------LKSLSLRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAV 77 (238)
Q Consensus 7 ~~~~~~~l~~a~~~g~~~~v~~l~~~~~---------~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~ 77 (238)
...+.+.+|+|+..|+.+.+..++.... ...++..+..|+||||+|+..|+.+++++|++.+.+ ++..
T Consensus 12 ~~~~~~~lH~Aa~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~---~~~~ 88 (285)
T 3d9h_A 12 SGLVPRGSHMASMDGKQGGMDGSKPAGPRDFPGIRLLSNPLMGDAVSDWSPMHEAAIHGHQLSLRNLISQGWA---VNII 88 (285)
T ss_dssp ------------------------------CCSEECCCCTTCSSSCCSCCHHHHHHHTTCHHHHHHHHHTTCC---SCEE
T ss_pred chHHHHHHHHHhhcCCCCCcccCCCCccccccchhhhhCcccCCCccCCCHHHHHHHcCCHHHHHHHHHCCCC---CCCc
Confidence 4567788999999999988888776642 234567788999999999999999999999998776 6778
Q ss_pred cCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHhh
Q 026440 78 DEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGAST 157 (238)
Q Consensus 78 ~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~ 157 (238)
+..|.||||+|+..|+.+++++|++.|++++..+..|.|||++|+..|+.+++++|++.|++++.. ..|.||||+|+..
T Consensus 89 ~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~-~~g~t~L~~A~~~ 167 (285)
T 3d9h_A 89 TADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPE-SDLASPIHEAARR 167 (285)
T ss_dssp CTTCCCHHHHHHHTTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCS-CTTSCHHHHHHHH
T ss_pred CCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCHHHHHHHHHHCCCCCCCC-CCCCCHHHHHHHc
Confidence 889999999999999999999999999999999999999999999999999999999999998864 4599999999999
Q ss_pred CCHHHHHHHHhcCCCCCccccCCCcHHHHHHHhCCHHHHHHHHhcCCCCccCCCCCCchhhccccccchHHHHHHHH
Q 026440 158 GNSALCELLIEEGAEVDATDKAGQTPLMNAVICYNKEVALLLIRHGADVDVEDKEGYTVLGRASNDFRPILIDAAKA 234 (238)
Q Consensus 158 ~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~~~~ 234 (238)
|+.+++++|+++|++++..+..|.||||+|+..++.+++++|+++|++++. +..|.||||+|+..++.+++++|..
T Consensus 168 g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~ 243 (285)
T 3d9h_A 168 GHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVNQ-GKGQDSPLHAVVRTASEELACLLMD 243 (285)
T ss_dssp TCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHTTCCTTC-CBTTBCHHHHHHHTTCHHHHHHHHH
T ss_pred CCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHCCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999995 8899999999999999888887754
No 21
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=7.1e-42 Score=273.27 Aligned_cols=225 Identities=32% Similarity=0.387 Sum_probs=149.4
Q ss_pred cchhhhccChHHHHHHHcCChHHHHHHHHHHhhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhhcccccccccccCCCC
Q 026440 3 MDIDQTIKDKDLFKAAETGDSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGW 82 (238)
Q Consensus 3 ~~~~~~~~~~~l~~a~~~g~~~~v~~l~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~ 82 (238)
++..+..+.++||.|+..|+.++|++|++.+ .+++..+..|.||||+|+..|+.+++++|++.+.+ ++..+..|+
T Consensus 7 ~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g--~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~---~~~~~~~g~ 81 (437)
T 1n11_A 7 GGGGGESGLTPLHVASFMGHLPIVKNLLQRG--ASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAK---VNAKAKDDQ 81 (437)
T ss_dssp --------CCHHHHHHHHTCHHHHHHHHHTT--CCSCCSSSCCCCHHHHHHHHTCHHHHHHHHHHTCC---SSCCCTTSC
T ss_pred ccccCCCCCCHHHHHHHCCCHHHHHHHHHcC--CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCC---CCCCCCCCC
Confidence 3445566677777777777777777777665 35566666777777777777777777777776655 555666777
Q ss_pred cHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHhhCCHHH
Q 026440 83 APIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSAL 162 (238)
Q Consensus 83 t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~ 162 (238)
||||+|+..|+.+++++|+++|++++..+..|.|||++|+..|+.+++++|++.+.+.+..+..|.||||.|+..|+.++
T Consensus 82 t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~~ 161 (437)
T 1n11_A 82 TPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRV 161 (437)
T ss_dssp CHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHH
T ss_pred CHHHHHHHCCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcCCCCCCCCHHHHHHHcCCHHH
Confidence 77777777777777777777777777666667777777777777777777777666666666666666666666666666
Q ss_pred HHHHHhcCCCCCccccCCCcHHHHHHHhCCHHHHHHHHhcCCCCccCCCCCCchhhccccccchHHHHHH
Q 026440 163 CELLIEEGAEVDATDKAGQTPLMNAVICYNKEVALLLIRHGADVDVEDKEGYTVLGRASNDFRPILIDAA 232 (238)
Q Consensus 163 ~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~~ 232 (238)
+++|+++|++++..+..|.||||+|+..++.+++++|+++|++++..+.+|.|||++|+..++.++++++
T Consensus 162 v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~L 231 (437)
T 1n11_A 162 AELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSL 231 (437)
T ss_dssp HHHHHHTTCCTTCCCSSCCCHHHHHHHTTCHHHHHHHGGGTCCSCCCCTTCCCHHHHHHHTTCHHHHHHH
T ss_pred HHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHH
Confidence 6666666666666666666666666666666666666666666666666666666666666665555544
No 22
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=1.9e-41 Score=255.86 Aligned_cols=197 Identities=28% Similarity=0.391 Sum_probs=184.5
Q ss_pred cCCCCCCCchHHHHHHHcCCHHHHHHHHhhcccccccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCchH
Q 026440 38 LSLRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTA 117 (238)
Q Consensus 38 ~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~ 117 (238)
++.++..|+||||+|+..|+.+++++|++.+..+..++..+..|+||||+|+..|+.+++++|+++|++++.++..|.||
T Consensus 2 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tp 81 (282)
T 1oy3_D 2 FGYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGVLVAERGGHTA 81 (282)
T ss_dssp CCCCCTTCCCHHHHHHHTTCHHHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTSCCH
T ss_pred CCccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCH
Confidence 45678999999999999999999999999988876678889999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCHHHHHHHHHcCCC-----------------------------------------------CCCCCCCCCcH
Q 026440 118 LHYAASKGWLKIVELLISRGAK-----------------------------------------------INSKDKVGCTA 150 (238)
Q Consensus 118 l~~a~~~~~~~~~~~l~~~~~~-----------------------------------------------~~~~~~~~~t~ 150 (238)
||+|+..|+.+++++|++.+++ ++..+..|.||
T Consensus 82 L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~ 161 (282)
T 1oy3_D 82 LHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTP 161 (282)
T ss_dssp HHHHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCCCTTSCCH
T ss_pred HHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCH
Confidence 9999999999999999998755 56677889999
Q ss_pred HHHHHhhCCHHHHHHHHhcCCCCCccccC-CCcHHHHHHHhCCHHHHHHHHhcCCCCccCCCCCCchhhccccccchHHH
Q 026440 151 LHRGASTGNSALCELLIEEGAEVDATDKA-GQTPLMNAVICYNKEVALLLIRHGADVDVEDKEGYTVLGRASNDFRPILI 229 (238)
Q Consensus 151 l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~-~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpl~~a~~~~~~~~~ 229 (238)
||+|+..|+.+++++|+++|++++..+.. |.||||+|+..++.+++++|+++|++++.+|..|.|||++|+..++.+++
T Consensus 162 L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v 241 (282)
T 1oy3_D 162 LHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNPILA 241 (282)
T ss_dssp HHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTSSCHHHH
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCHHHHHHHcCCcHHH
Confidence 99999999999999999999999998854 99999999999999999999999999999999999999999999998888
Q ss_pred HHHHH
Q 026440 230 DAAKA 234 (238)
Q Consensus 230 ~~~~~ 234 (238)
++|..
T Consensus 242 ~~Ll~ 246 (282)
T 1oy3_D 242 RLLRA 246 (282)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 87753
No 23
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=100.00 E-value=8.2e-41 Score=258.65 Aligned_cols=222 Identities=28% Similarity=0.411 Sum_probs=190.2
Q ss_pred cChHHHHHHHcCChHHHHHHHHHHhhhhcCCCCC-CCchHHHHHHHcCCHHHHHHHHhhcccccc---------------
Q 026440 10 KDKDLFKAAETGDSSTFKSLSKQQLLKSLSLRND-DDRTLLHVAASCGHPEVVEILLSVDESANV--------------- 73 (238)
Q Consensus 10 ~~~~l~~a~~~g~~~~v~~l~~~~~~~~~~~~~~-~~~t~L~~A~~~~~~~~~~~Ll~~~~~~~~--------------- 73 (238)
+++.|+.|+++|++++|+.|++.+ .+++.++. .|+||||+|+..|+.+++++|+++|..+..
T Consensus 25 ~~t~L~~Av~~g~~~~V~~LL~~G--advn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~ 102 (337)
T 4g8k_A 25 DNHLLIKAVQNEDVDLVQQLLEGG--ANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFILAAIA 102 (337)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHT--CCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHH
T ss_pred CChHHHHHHHcCCHHHHHHHHHCC--CCCCccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCCCchhHHHHhc
Confidence 466899999999999999999987 56776665 589999999999999999999998776432
Q ss_pred ---------------cccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCccc----------CCCCchHHHHHHHcCCHH
Q 026440 74 ---------------VNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLK----------NDGGRTALHYAASKGWLK 128 (238)
Q Consensus 74 ---------------~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~----------~~~~~~~l~~a~~~~~~~ 128 (238)
++..+..|.||+++|+..++.++++++++.|++++.. +..|.||||+|+..|+.+
T Consensus 103 ~~~~~~~~~~~~~~~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~~ 182 (337)
T 4g8k_A 103 GSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVE 182 (337)
T ss_dssp TCHHHHHHHHTTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTCHH
T ss_pred ccchhhHHhhhccchhhhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCCCHH
Confidence 4556778999999999999999999999999877643 345889999999999999
Q ss_pred HHHHHHH-cCCCCCCCCCCCCcHHHHHHhhCC----HHHHHHHHhcCCCCCccccCCCcHHHHHHHhCCHHHHHHHHhc-
Q 026440 129 IVELLIS-RGAKINSKDKVGCTALHRGASTGN----SALCELLIEEGAEVDATDKAGQTPLMNAVICYNKEVALLLIRH- 202 (238)
Q Consensus 129 ~~~~l~~-~~~~~~~~~~~~~t~l~~a~~~~~----~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~- 202 (238)
++++|++ .|++++..+..|.++++.++..+. ..++++|+++|++++.++..|.||||+|+..++.++++.|++.
T Consensus 183 ~v~~LL~~~gad~n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~n~~d~~g~t~L~~a~~~~~~~~v~~Ll~~~ 262 (337)
T 4g8k_A 183 VLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQE 262 (337)
T ss_dssp HHHHHHHHSCCCTTCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHTST
T ss_pred HHHHHHhccCCCcCccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhhhhHHHHHHHHhc
Confidence 9999996 589999999889999887766544 3578888999999999999999999999999999999998875
Q ss_pred CCCCccCCCCCCchhhccccccchHHHHHHH
Q 026440 203 GADVDVEDKEGYTVLGRASNDFRPILIDAAK 233 (238)
Q Consensus 203 ~~~~~~~~~~g~tpl~~a~~~~~~~~~~~~~ 233 (238)
|++++.+|..|+||||+|+..++.+++++|.
T Consensus 263 ~~~vn~~d~~G~TpL~~A~~~g~~~iv~~Ll 293 (337)
T 4g8k_A 263 HIEINDTDSDGKTALLLAVELKLKKIAELLC 293 (337)
T ss_dssp TCCTTCBCTTSCBHHHHHHHTTCHHHHHHHH
T ss_pred CCcccCcCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 7899999999999999999999977776653
No 24
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=100.00 E-value=6.9e-41 Score=253.14 Aligned_cols=217 Identities=15% Similarity=0.116 Sum_probs=191.7
Q ss_pred cchhhhccChHHHHHHHcCChHHHHHHHHHHhhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhhcccccccccccCCCC
Q 026440 3 MDIDQTIKDKDLFKAAETGDSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGW 82 (238)
Q Consensus 3 ~~~~~~~~~~~l~~a~~~g~~~~v~~l~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~ 82 (238)
++..+..+.++||+|+..|+.+++++|++.+ .+++.. +|.||||+|+..|+.+++++|++.|.+ ++..+..|+
T Consensus 24 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g--~~~~~~--~g~t~L~~A~~~g~~~~v~~Ll~~ga~---~~~~d~~g~ 96 (285)
T 3kea_A 24 TFKADVHGHSASYYAIADNNVRLVCTLLNAG--ALKNLL--ENEFPLHQAATLEDTKIVKILLFSGLD---DSQFDDKGN 96 (285)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT--GGGSCC--TTCCHHHHHTTSSSCHHHHHHHHTTCC---TTCCCTTSC
T ss_pred CCccCCCCCCHHHHHHHcCCHHHHHHHHhCC--CCCCCC--CCCCHHHHHHHcCCHHHHHHHHHCCCC---CCCcCCCCC
Confidence 4556778889999999999999999999887 345544 589999999999999999999998877 666788999
Q ss_pred cHHHHHHHcCCHHHHHHHHHcCCCCcccCCCC-chHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHhhCCHH
Q 026440 83 APIHSAASIGNVTIVEMLLSKGADVNLKNDGG-RTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSA 161 (238)
Q Consensus 83 t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~-~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~ 161 (238)
||||+|+..|+.+++++|+++|++++..+..| .||||+|+..|+.+++++|+++|.+.... ..|.||||+|+..|+.+
T Consensus 97 t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~-~~g~t~L~~A~~~g~~~ 175 (285)
T 3kea_A 97 TALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFDL-AILLSCIHITIKNGHVD 175 (285)
T ss_dssp CHHHHHHHTTCHHHHHHHHHHCGGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTTCCC-STHHHHHHHHHHTTCHH
T ss_pred cHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCccccc-cCCccHHHHHHHcChHH
Confidence 99999999999999999999999999999888 79999999999999999999998876332 27899999999999999
Q ss_pred HHHHHHhcCCCCCccccCCCcH-HHHHHHhCCHHHHHHHHhcCCCCccCCCCCCchhhccccccchHHHHHHHH
Q 026440 162 LCELLIEEGAEVDATDKAGQTP-LMNAVICYNKEVALLLIRHGADVDVEDKEGYTVLGRASNDFRPILIDAAKA 234 (238)
Q Consensus 162 ~~~~Ll~~~~~~~~~~~~~~t~-l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~~~~ 234 (238)
++++|+++|++++.++..|.|| ||+|+..++.+++++|+++|++++..|. .++..++.+++++|.+
T Consensus 176 ~v~~Ll~~gad~n~~~~~g~t~~L~~A~~~~~~~~v~~Ll~~gad~~~~~~-------~a~~~~~~~iv~~Ll~ 242 (285)
T 3kea_A 176 MMILLLDYMTSTNTNNSLLFIPDIKLAIDNKDIEMLQALFKYDINIYSANL-------ENVLLDDAEIAKMIIE 242 (285)
T ss_dssp HHHHHHHHHHHTCTTCCCBCCTTHHHHHHHTCHHHHHHHTTSCBCSTTTTG-------GGGTTTCHHHHHHHHH
T ss_pred HHHHHHHcCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCh-------hhhhcCCHHHHHHHHH
Confidence 9999999999999999999997 9999999999999999999999999873 5567888888777653
No 25
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=100.00 E-value=9.9e-42 Score=251.19 Aligned_cols=217 Identities=26% Similarity=0.283 Sum_probs=190.5
Q ss_pred hhhccChHHHHHHHcCChHHHHHHHHHHhhh--hcCCCCCCCchHHHHHHHcCCHHHHHHHHhhcccccccccccCCCCc
Q 026440 6 DQTIKDKDLFKAAETGDSSTFKSLSKQQLLK--SLSLRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWA 83 (238)
Q Consensus 6 ~~~~~~~~l~~a~~~g~~~~v~~l~~~~~~~--~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~t 83 (238)
.+..+.++||+|+..|+.+++++|++.+... +++..+..|.||||+|+..|+.+++++|++.|.+ ++..+..|.|
T Consensus 4 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~---~~~~~~~g~t 80 (236)
T 1ikn_D 4 LTEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCD---PELRDFRGNT 80 (236)
T ss_dssp ---CCCCTTHHHHHTTCSSSSSCCCC-----CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCC---SCCCCTTCCC
T ss_pred CCCCCCchhHHHHHcCChhHHHHHHHHhhccHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC---CCCcCCCCCC
Confidence 4567889999999999999999999887432 5788899999999999999999999999988877 6667889999
Q ss_pred HHHHHHHcCCHHHHHHHHHcCCC------CcccCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCC-CCCcHHHHHHh
Q 026440 84 PIHSAASIGNVTIVEMLLSKGAD------VNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDK-VGCTALHRGAS 156 (238)
Q Consensus 84 ~l~~a~~~~~~~~~~~Ll~~~~~------~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~-~~~t~l~~a~~ 156 (238)
|||+|+..++.+++++|++.+.. .+..+..|.||||+|+..|+.+++++|+++|++++..+. .|.||||+|+.
T Consensus 81 ~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~ 160 (236)
T 1ikn_D 81 PLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVD 160 (236)
T ss_dssp HHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHH
Confidence 99999999999999999999875 455677899999999999999999999999999999987 89999999999
Q ss_pred hCCHHHHHHHHhcCCCCCccccCCCcHHHHHHHhCCHHHHHHHHhcCCCCc--cCCCCCCchhhccccccc
Q 026440 157 TGNSALCELLIEEGAEVDATDKAGQTPLMNAVICYNKEVALLLIRHGADVD--VEDKEGYTVLGRASNDFR 225 (238)
Q Consensus 157 ~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~--~~~~~g~tpl~~a~~~~~ 225 (238)
.++.+++++|+++|++++.++..|.|||++|+..++.+++++|+++|+++. ..+..|.||.+.+.....
T Consensus 161 ~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~~ 231 (236)
T 1ikn_D 161 LQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLENLQMLPESEDEESYDTESEFTE 231 (236)
T ss_dssp TTCHHHHHHHHTTTCCSCCCCTTCCCGGGGCTTSSCHHHHHHHHTTSCGGGSSCCCCCTTTCCCCC-----
T ss_pred cCCHHHHHHHHHcCCCCCcccCCCCCHHHHHHccCchHHHHHHHHcchhhhhcCCccchHHHHhhhccccc
Confidence 999999999999999999999999999999999999999999999999876 888899999998876543
No 26
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=1.4e-39 Score=239.85 Aligned_cols=194 Identities=25% Similarity=0.388 Sum_probs=184.6
Q ss_pred hcCCCCCCCchHHHHHHHcCCHHHHHHHHhhcccccccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCch
Q 026440 37 SLSLRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRT 116 (238)
Q Consensus 37 ~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~ 116 (238)
+++..+..|.||||+|+..|+.+++++|++.+.+ ++..+..|.|||++|+..|+.+++++|++.|++++..+..|.|
T Consensus 3 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~---~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t 79 (237)
T 3b7b_A 3 NFKMEHQNKRSPLHAAAEAGHVDICHMLVQAGAN---IDTCSEDQRTPLMEAAENNHLEAVKYLIKAGALVDPKDAEGST 79 (237)
T ss_dssp CCCCSSCCSCCHHHHHHHHTCHHHHHHHHHTTCC---TTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCCCCCCTTSCC
T ss_pred CcccccCCCCCHHHHHHHcCcHHHHHHHHHcCCC---cCccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCc
Confidence 4667889999999999999999999999998877 6677889999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCHHHHHHHHHcC-CCCCCCCCCCCcHHHHHHhhCCHHHHHHHHhcCCCCCccccCCCcHHHHHHHhCCHHH
Q 026440 117 ALHYAASKGWLKIVELLISRG-AKINSKDKVGCTALHRGASTGNSALCELLIEEGAEVDATDKAGQTPLMNAVICYNKEV 195 (238)
Q Consensus 117 ~l~~a~~~~~~~~~~~l~~~~-~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~ 195 (238)
||++|+..|+.+++++|++.+ .+++..+..|.||||.|+..++.+++++|+++|++++.++..|.||||+|+..++.++
T Consensus 80 ~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~ 159 (237)
T 3b7b_A 80 CLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSGCVDI 159 (237)
T ss_dssp HHHHHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCHHH
T ss_pred HHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHCCCHHH
Confidence 999999999999999999998 8899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCccCCCCCCchhhccccccchHHHHHHH
Q 026440 196 ALLLIRHGADVDVEDKEGYTVLGRASNDFRPILIDAAK 233 (238)
Q Consensus 196 ~~~Ll~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~~~ 233 (238)
+++|+++|++++.+|..|.||+|+|+..++.+++++|.
T Consensus 160 ~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 197 (237)
T 3b7b_A 160 AEILLAAKCDLHAVNIHGDSPLHIAARENRYDCVVLFL 197 (237)
T ss_dssp HHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHhHHHHHH
Confidence 99999999999999999999999999999988887764
No 27
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=100.00 E-value=2.8e-40 Score=258.14 Aligned_cols=226 Identities=16% Similarity=0.160 Sum_probs=200.4
Q ss_pred ccchhhhccChHHHHHHHcCChHHHHHHHHHHhhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhh----cccccc----
Q 026440 2 DMDIDQTIKDKDLFKAAETGDSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAASCGHPEVVEILLSV----DESANV---- 73 (238)
Q Consensus 2 ~~~~~~~~~~~~l~~a~~~g~~~~v~~l~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~----~~~~~~---- 73 (238)
|++..+..+.++||+|+..|+.++|++|++.+. ...+..|.||||+|+..|+.+++++|++. +..+..
T Consensus 45 ~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~----~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~ 120 (364)
T 3ljn_A 45 SPTIQNRFGCTALHLACKFGCVDTAKYLASVGE----VHSLWHGQKPIHLAVMANKTDLVVALVEGAKERGQMPESLLNE 120 (364)
T ss_dssp CTTCCCTTCCCHHHHHHHHCCHHHHHHHHHHCC----CCCCBTTBCHHHHHHHTTCHHHHHHHHHHHHHHTCCHHHHHTC
T ss_pred CccccCCCCCcHHHHHHHcCCHHHHHHHHHCCC----CccccCCCCHHHHHHHcCCHHHHHHHHHhccccCCCHHHHHhh
Confidence 456667788999999999999999999999983 33345799999999999999999999997 444221
Q ss_pred ----------cccccCCCCcHHHHHHHcC--CHHHHHHHHHcCCCCcccCCCCchHHHHHHHcCCHHHHHHHHHcCCC--
Q 026440 74 ----------VNAVDEEGWAPIHSAASIG--NVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAK-- 139 (238)
Q Consensus 74 ----------~~~~~~~~~t~l~~a~~~~--~~~~~~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~-- 139 (238)
.+..+..|.||||+|+..| +.+++++|++.|++++..+..|.|||++|+..|+.+++++|++.|++
T Consensus 121 ~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~ 200 (364)
T 3ljn_A 121 CDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKS 200 (364)
T ss_dssp CCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSS
T ss_pred cchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHhcccccc
Confidence 1226778999999999999 99999999999999999999999999999999999999999999998
Q ss_pred ---CCCCCCCCCcHHHHHHhhCCHHHHHHHHhcCCCCCccccCCCcHHHHHHHhCCHHHHHHHHhcCCCCcc--------
Q 026440 140 ---INSKDKVGCTALHRGASTGNSALCELLIEEGAEVDATDKAGQTPLMNAVICYNKEVALLLIRHGADVDV-------- 208 (238)
Q Consensus 140 ---~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~-------- 208 (238)
++..+..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|++++.
T Consensus 201 ~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~ 280 (364)
T 3ljn_A 201 SLRLDYANKQGNSHLHWAILINWEDVAMRFVEMGIDVNMEDNEHTVPLYLSVRAAMVLLTKELLQKTDVFLIQACPYHNG 280 (364)
T ss_dssp SCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTCCHHHHHHHHHHSCHHHHHTCTTBSS
T ss_pred cccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhChHHHHHHHHHcCCchhhhcCcccCc
Confidence 999999999999999999999999999999999999999999999999999999999999999877533
Q ss_pred ----CCCCCCchhhccccccchHHHHH
Q 026440 209 ----EDKEGYTVLGRASNDFRPILIDA 231 (238)
Q Consensus 209 ----~~~~g~tpl~~a~~~~~~~~~~~ 231 (238)
.+..|++|++.|...++.+.+..
T Consensus 281 ~~~~~~~~~~~~l~~aa~~~~~~~v~~ 307 (364)
T 3ljn_A 281 TTVLPDRVVWLDFVPAAADPSKQEVLQ 307 (364)
T ss_dssp SSBCGGGCCCCTTSCSSCCHHHHHHHH
T ss_pred ccccccccccccchhhhhccCHHHHHH
Confidence 45678999999998886544433
No 28
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=2.8e-40 Score=245.88 Aligned_cols=196 Identities=27% Similarity=0.332 Sum_probs=152.6
Q ss_pred hcCCCCCCCchHHHHHHHcC-------------CHHHHHHHHhhcccccccccccCCCCcHHHHHHHcCCHHHHHHHHHc
Q 026440 37 SLSLRNDDDRTLLHVAASCG-------------HPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSK 103 (238)
Q Consensus 37 ~~~~~~~~~~t~L~~A~~~~-------------~~~~~~~Ll~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~ 103 (238)
+++.+|..|.||||+|+..| +.+++++|++.+... ....+..|+||||+|+..|+.+++++|++.
T Consensus 2 dvn~~d~~g~tpL~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll~~g~~~--~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ 79 (253)
T 1yyh_A 2 DVNVRGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASL--HNQTDRTGETALHLAARYSRSDAAKRLLEA 79 (253)
T ss_dssp ----------------------------------------------------CCCTTSCCHHHHHHHTTCHHHHHHHHHT
T ss_pred CCCCCCCCCCcHHHHHHhccccccccchhhcCCChHHHHHHHHccCCc--ccccCCCCCcHHHHHHHcCCHHHHHHHHHc
Confidence 46778899999999999987 899999999987663 234578999999999999999999999999
Q ss_pred CCCCcccCCCCchHHHHHHHcCCHHHHHHHHHcCC-CCCCCCCCCCcHHHHHHhhCCHHHHHHHHhcCCCCCccccCCCc
Q 026440 104 GADVNLKNDGGRTALHYAASKGWLKIVELLISRGA-KINSKDKVGCTALHRGASTGNSALCELLIEEGAEVDATDKAGQT 182 (238)
Q Consensus 104 ~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~-~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t 182 (238)
|++++..+..|.||||+|+..|+.+++++|++.+. +++..+..|.||||+|+..++.+++++|+++|++++..+..|.|
T Consensus 80 g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t 159 (253)
T 1yyh_A 80 SADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKS 159 (253)
T ss_dssp TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHTCSSHHHHHHHTTCCTTCBCTTSCB
T ss_pred CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCCCcCCCCCC
Confidence 99999999999999999999999999999999987 88999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCHHHHHHHHhcCCCCccCCCCCCchhhccccccchHHHHHHHH
Q 026440 183 PLMNAVICYNKEVALLLIRHGADVDVEDKEGYTVLGRASNDFRPILIDAAKA 234 (238)
Q Consensus 183 ~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~~~~ 234 (238)
|||+|+..++.+++++|+++|++++.+|..|.|||++|+..++.+++++|..
T Consensus 160 ~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~ 211 (253)
T 1yyh_A 160 ALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLD 211 (253)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999888877754
No 29
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=1.1e-39 Score=243.80 Aligned_cols=222 Identities=24% Similarity=0.237 Sum_probs=200.2
Q ss_pred ccchhhhccChHHHHHHHcCChHHHHHHHHHHhhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhhcccccccccccCCC
Q 026440 2 DMDIDQTIKDKDLFKAAETGDSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEG 81 (238)
Q Consensus 2 ~~~~~~~~~~~~l~~a~~~g~~~~v~~l~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~ 81 (238)
+++..+..+.++||+|+..|+.+++++|++.+ .+++..+..|.||||+|+..|+.+++++|++.+.+.. .+..|
T Consensus 28 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~----~~~~g 101 (261)
T 2xai_A 28 AVNIITADHVSPLHEACLGGHLSCVKILLKHG--AQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQ----PESDL 101 (261)
T ss_dssp CSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTT--CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSS----CSCTT
T ss_pred CCCCcCCCCCCHHHHHHHcCCHHHHHHHHHCC--CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC----CCCCC
Confidence 45566778899999999999999999999986 5788889999999999999999999999999887743 24569
Q ss_pred CcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHhhCCHH
Q 026440 82 WAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSA 161 (238)
Q Consensus 82 ~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~ 161 (238)
.||||+|+..++.+++++|++.|++++..+..|.||||+|+..|+.+++++|++.|++++. +..|.||||+|+..++.+
T Consensus 102 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~g~t~Lh~A~~~~~~~ 180 (261)
T 2xai_A 102 ASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVNQ-GKGQDSPLHAVARTASEE 180 (261)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHHTCCTTC-CBTTBCHHHHHHHHTCHH
T ss_pred CCHHHHHHHcCcHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCC-CCCCCChHHHHHHcCCHH
Confidence 9999999999999999999999999999999999999999999999999999999999985 788999999999999999
Q ss_pred HHHHHHhcCCCCCccccCCCcHHHHHHHhCCHHHHHHHHhcCCC--------CccCCCCCCchhhccccccchHHHHHH
Q 026440 162 LCELLIEEGAEVDATDKAGQTPLMNAVICYNKEVALLLIRHGAD--------VDVEDKEGYTVLGRASNDFRPILIDAA 232 (238)
Q Consensus 162 ~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~--------~~~~~~~g~tpl~~a~~~~~~~~~~~~ 232 (238)
++++|+++|++++.+|..|.||+|+|+..+ +++++|++++.. ...+|..|.||++.+.+...++.++-+
T Consensus 181 ~v~~Ll~~gad~~~~d~~g~tpl~~A~~~~--~~~~~ll~~~~~~~l~~~~~~~~r~~~g~t~l~~~~~~~~p~~l~~~ 257 (261)
T 2xai_A 181 LACLLMDFGADTQAKNAEGKRPVELVPPES--PLAQLFLEREGPPSLMQLCRLRIRKCFGIQQHHKITKLVLPEDLKQF 257 (261)
T ss_dssp HHHHHHHTTCCTTCCCTTSCCGGGGSCTTC--THHHHHHHC-CCCCHHHHHHHHHHTTSCTTCGGGGGGSSSCHHHHHH
T ss_pred HHHHHHHcCCCCCCcCCCCCChhhhccccc--cHHHHHHhccCCccHHHHHHHHHHHHhchhccccCcccCCcHHHHHH
Confidence 999999999999999999999999999644 589999998764 457889999999999988776665544
No 30
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=100.00 E-value=7.1e-39 Score=233.91 Aligned_cols=197 Identities=25% Similarity=0.283 Sum_probs=185.3
Q ss_pred hhccChHHHHHHHcCChHHHHHHHHHHhhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhhcccccccccccCCCCcHHH
Q 026440 7 QTIKDKDLFKAAETGDSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIH 86 (238)
Q Consensus 7 ~~~~~~~l~~a~~~g~~~~v~~l~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~t~l~ 86 (238)
+..+.++||+|+..|+.+++++|++.+ .+++..+..|.||||+|+..|+.+++++|++.+.. ..+..+..|.|||+
T Consensus 22 d~~g~t~L~~A~~~g~~~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~--~~~~~~~~g~t~L~ 97 (223)
T 2f8y_A 22 DRTGETALHLAARYSRSDAAKRLLEAS--ADANIQDNMGRTPLHAAVSADAQGVFQILIRNRAT--DLDARMHDGTTPLI 97 (223)
T ss_dssp TTTCCCHHHHHHHTTCHHHHHHHHHTT--CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHBTTS--CTTCCCTTCCCHHH
T ss_pred CCCCCchHHHHHHcCCHHHHHHHHHcC--CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC--CcccCCCCCCcHHH
Confidence 567888999999999999999999886 56778899999999999999999999999987652 25667889999999
Q ss_pred HHHHcCCHHHHHHHHHcCCCCcccCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHhhCCHHHHHHH
Q 026440 87 SAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELL 166 (238)
Q Consensus 87 ~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L 166 (238)
+|+..++.+++++|++.|++++..+..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..++.+++++|
T Consensus 98 ~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~L 177 (223)
T 2f8y_A 98 LAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVL 177 (223)
T ss_dssp HHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHH
T ss_pred HHHHhCcHHHHHHHHHcCCCCcCcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCcCHHHHHHHcCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCCCCccccCCCcHHHHHHHhCCHHHHHHHHhcCCCCc
Q 026440 167 IEEGAEVDATDKAGQTPLMNAVICYNKEVALLLIRHGADVD 207 (238)
Q Consensus 167 l~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~ 207 (238)
+++|++++.++..|.||+++|+..++.+++++|+++|+...
T Consensus 178 l~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L~~~g~~~~ 218 (223)
T 2f8y_A 178 LDHFANRDITDHMDRLPRDIAQERMHHDIVRLLDEYNLVRS 218 (223)
T ss_dssp HHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCSSC
T ss_pred HHcCCCCccccccCCCHHHHHHHhcchHHHHHHHHcCCCcc
Confidence 99999999999999999999999999999999999998754
No 31
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=4.3e-39 Score=237.64 Aligned_cols=196 Identities=27% Similarity=0.371 Sum_probs=178.3
Q ss_pred CCCCCCCchHHHHHHHcCCHHHHHHHHhhc-ccccccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCchH
Q 026440 39 SLRNDDDRTLLHVAASCGHPEVVEILLSVD-ESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTA 117 (238)
Q Consensus 39 ~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~~-~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~ 117 (238)
+.+|..|.||||+|+..|+.+++++|++.. ..+..++..+..|.||||+|+..|+.+++++|++.|++++..+..|.||
T Consensus 3 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~ 82 (241)
T 1k1a_A 3 TRADEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQTA 82 (241)
T ss_dssp ----CTTCCHHHHHHHTTCHHHHHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCH
T ss_pred cccCCCCCcHHHHHHHcCCHHHHHHHHHHHHhcCCCCCcccccCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCH
Confidence 456889999999999999999999999731 1122367788899999999999999999999999999999999999999
Q ss_pred HHHHHHcCCHHHHHHHHHcCC----CCCCCCCCCCcHHHHHHhhCCHHHHHHHHhcCCCCCccc-cCCCcHHHHHHHhCC
Q 026440 118 LHYAASKGWLKIVELLISRGA----KINSKDKVGCTALHRGASTGNSALCELLIEEGAEVDATD-KAGQTPLMNAVICYN 192 (238)
Q Consensus 118 l~~a~~~~~~~~~~~l~~~~~----~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~-~~~~t~l~~a~~~~~ 192 (238)
|++|+..++.+++++|++.+. +++..+..|.||||.|+..++.+++++|+++|++++..+ ..|.||||+|+..++
T Consensus 83 l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~ 162 (241)
T 1k1a_A 83 AHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNS 162 (241)
T ss_dssp HHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTC
T ss_pred HHHHHHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCcccccccCCCcHHHHHHHcCC
Confidence 999999999999999999987 788889999999999999999999999999999999988 789999999999999
Q ss_pred HHHHHHHHhcCCCCccCCCCCCchhhccccccchHHHHHHHH
Q 026440 193 KEVALLLIRHGADVDVEDKEGYTVLGRASNDFRPILIDAAKA 234 (238)
Q Consensus 193 ~~~~~~Ll~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~~~~ 234 (238)
.+++++|+++|++++.+|..|.||+|+|+..++.+++++|..
T Consensus 163 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 204 (241)
T 1k1a_A 163 LSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVR 204 (241)
T ss_dssp HHHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHh
Confidence 999999999999999999999999999999999888777653
No 32
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=100.00 E-value=2.4e-40 Score=250.21 Aligned_cols=207 Identities=18% Similarity=0.189 Sum_probs=188.3
Q ss_pred HHcCChHHHHHHHHHHhhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhhcccccccccccCCCCcHHHHHHHcCCHHHH
Q 026440 18 AETGDSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIGNVTIV 97 (238)
Q Consensus 18 ~~~g~~~~v~~l~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~ 97 (238)
+...+.+.+..++... +++.+|..|.||||+|+..|+.+++++|++.|.++ +.. +|+||||+|+..|+.+++
T Consensus 7 i~~~~~~~v~~lL~~~---~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~---~~~--~g~t~L~~A~~~g~~~~v 78 (285)
T 3kea_A 7 INTWKSKQLKSFLSSK---DTFKADVHGHSASYYAIADNNVRLVCTLLNAGALK---NLL--ENEFPLHQAATLEDTKIV 78 (285)
T ss_dssp GGGCCHHHHHHHHHST---TTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTGGG---SCC--TTCCHHHHHTTSSSCHHH
T ss_pred HHhcCHHHHHHHHHhC---CCCccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCC---CCC--CCCCHHHHHHHcCCHHHH
Confidence 4566777777777665 57888999999999999999999999999988773 333 589999999999999999
Q ss_pred HHHHHcCCCCcccCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCC-CcHHHHHHhhCCHHHHHHHHhcCCCCCcc
Q 026440 98 EMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVG-CTALHRGASTGNSALCELLIEEGAEVDAT 176 (238)
Q Consensus 98 ~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~-~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~ 176 (238)
++|+++|++++.++..|.||||+|+..|+.+++++|+++|++++..+..| .||||+|+..++.+++++|+++|.+....
T Consensus 79 ~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~ 158 (285)
T 3kea_A 79 KILLFSGLDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFDL 158 (285)
T ss_dssp HHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTTCCC
T ss_pred HHHHHCCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCccccc
Confidence 99999999999999999999999999999999999999999999999999 79999999999999999999999877322
Q ss_pred ccCCCcHHHHHHHhCCHHHHHHHHhcCCCCccCCCCCCch-hhccccccchHHHHHHH
Q 026440 177 DKAGQTPLMNAVICYNKEVALLLIRHGADVDVEDKEGYTV-LGRASNDFRPILIDAAK 233 (238)
Q Consensus 177 ~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tp-l~~a~~~~~~~~~~~~~ 233 (238)
..|.||||+|+..++.+++++|+++|++++.+|..|.|| |++|+..++.+++++|.
T Consensus 159 -~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~~L~~A~~~~~~~~v~~Ll 215 (285)
T 3kea_A 159 -AILLSCIHITIKNGHVDMMILLLDYMTSTNTNNSLLFIPDIKLAIDNKDIEMLQALF 215 (285)
T ss_dssp -STHHHHHHHHHHTTCHHHHHHHHHHHHHTCTTCCCBCCTTHHHHHHHTCHHHHHHHT
T ss_pred -cCCccHHHHHHHcChHHHHHHHHHcCCCCCcccCCCCChHHHHHHHcCCHHHHHHHH
Confidence 278999999999999999999999999999999999998 99999999977777653
No 33
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=100.00 E-value=2.8e-39 Score=237.43 Aligned_cols=201 Identities=27% Similarity=0.305 Sum_probs=163.0
Q ss_pred ccChHHHHHHHcCChHHHHHHHHHHhhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhhcccccc--cccccCCCCcHHH
Q 026440 9 IKDKDLFKAAETGDSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAASCGHPEVVEILLSVDESANV--VNAVDEEGWAPIH 86 (238)
Q Consensus 9 ~~~~~l~~a~~~g~~~~v~~l~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~~~~~~~--~~~~~~~~~t~l~ 86 (238)
.++++||.|+..|+.+++++|++.. +.+++..+..|+||||+|+..|+.+++++|++.+..... .+..+..|.||||
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~~-g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~ 80 (232)
T 2rfa_A 2 IWESPLLLAAKENDVQALSKLLKFE-GCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALH 80 (232)
T ss_dssp CTTCHHHHHHHTTCHHHHHHHHTTT-CSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHhc-CCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHH
Confidence 3577899999999999999998873 356778888899999999999999999999988765321 1455678889999
Q ss_pred HHHHcCCHHHHHHHHHcCCCCcccCC-------------CCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHH
Q 026440 87 SAASIGNVTIVEMLLSKGADVNLKND-------------GGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHR 153 (238)
Q Consensus 87 ~a~~~~~~~~~~~Ll~~~~~~~~~~~-------------~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~ 153 (238)
+|+..++.+++++|+++|++++..+. .|.||||+|+..|+.+++++|+++|++++..|..|.||||+
T Consensus 81 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~ 160 (232)
T 2rfa_A 81 IAVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDSLGNTVLHI 160 (232)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHH
T ss_pred HHHHcCCHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHH
Confidence 99999999999999999888877654 68888888888888888888888888888888888888888
Q ss_pred HHhhCCHHHH----HHHHhcCCCC------CccccCCCcHHHHHHHhCCHHHHHHHHhcCCCCccCC
Q 026440 154 GASTGNSALC----ELLIEEGAEV------DATDKAGQTPLMNAVICYNKEVALLLIRHGADVDVED 210 (238)
Q Consensus 154 a~~~~~~~~~----~~Ll~~~~~~------~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~ 210 (238)
|+..++.+++ ++|+++|+++ +.++..|.||||+|+..|+.+++++|+++|+......
T Consensus 161 A~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~A~~~g~~~~v~~Ll~~g~~~~~~~ 227 (232)
T 2rfa_A 161 LILQPNKTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVEGNIVMFQHLMQKRKHIAAAH 227 (232)
T ss_dssp HHTCSCHHHHHHHHHHHHHTTCSCSSCCGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHC----
T ss_pred HHHcCChHHHHHHHHHHHhcCCchhhhhhhccCCCCCCCHHHHHHHcCCHHHHHHHHhcCccchhhh
Confidence 8888888877 8888888877 4677888888888888888888888888887765543
No 34
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=100.00 E-value=2.4e-39 Score=237.79 Aligned_cols=188 Identities=25% Similarity=0.292 Sum_probs=174.3
Q ss_pred CCchHHHHHHHcCCHHHHHHHHhh-cccccccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCC-----cccCCCCchH
Q 026440 44 DDRTLLHVAASCGHPEVVEILLSV-DESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADV-----NLKNDGGRTA 117 (238)
Q Consensus 44 ~~~t~L~~A~~~~~~~~~~~Ll~~-~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~-----~~~~~~~~~~ 117 (238)
.|.||||.|+..|+.+++++|++. +.+ ++..+..|+||||+|+..|+.+++++|++.|+++ +..+..|.||
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~~g~~---~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~ 78 (232)
T 2rfa_A 2 IWESPLLLAAKENDVQALSKLLKFEGCE---VHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTA 78 (232)
T ss_dssp CTTCHHHHHHHTTCHHHHHHHHTTTCSC---TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHhcCCC---cccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCH
Confidence 489999999999999999999986 555 6778899999999999999999999999999876 5566789999
Q ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCCCC-------------CCCcHHHHHHhhCCHHHHHHHHhcCCCCCccccCCCcHH
Q 026440 118 LHYAASKGWLKIVELLISRGAKINSKDK-------------VGCTALHRGASTGNSALCELLIEEGAEVDATDKAGQTPL 184 (238)
Q Consensus 118 l~~a~~~~~~~~~~~l~~~~~~~~~~~~-------------~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l 184 (238)
||+|+..|+.+++++|+++|++++..+. .|.||||+|+..++.+++++|+++|++++.+|..|.|||
T Consensus 79 L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~L 158 (232)
T 2rfa_A 79 LHIAVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDSLGNTVL 158 (232)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHH
T ss_pred HHHHHHcCCHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHH
Confidence 9999999999999999999999988765 699999999999999999999999999999999999999
Q ss_pred HHHHHhCCHHHH----HHHHhcCCCC------ccCCCCCCchhhccccccchHHHHHHHH
Q 026440 185 MNAVICYNKEVA----LLLIRHGADV------DVEDKEGYTVLGRASNDFRPILIDAAKA 234 (238)
Q Consensus 185 ~~a~~~~~~~~~----~~Ll~~~~~~------~~~~~~g~tpl~~a~~~~~~~~~~~~~~ 234 (238)
|+|+..++.+++ ++|+++|+++ +.+|..|.||+++|+..++.+++++|.+
T Consensus 159 ~~A~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~A~~~g~~~~v~~Ll~ 218 (232)
T 2rfa_A 159 HILILQPNKTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVEGNIVMFQHLMQ 218 (232)
T ss_dssp HHHHTCSCHHHHHHHHHHHHHTTCSCSSCCGGGCCCTTSCCHHHHHHHHTCHHHHHHHHH
T ss_pred HHHHHcCChHHHHHHHHHHHhcCCchhhhhhhccCCCCCCCHHHHHHHcCCHHHHHHHHh
Confidence 999999999988 9999999998 5889999999999999999888887754
No 35
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=100.00 E-value=2.6e-40 Score=243.60 Aligned_cols=195 Identities=26% Similarity=0.336 Sum_probs=175.9
Q ss_pred CCCCCCchHHHHHHHcCCHHHHHHHHhhccc-ccccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCchHH
Q 026440 40 LRNDDDRTLLHVAASCGHPEVVEILLSVDES-ANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTAL 118 (238)
Q Consensus 40 ~~~~~~~t~L~~A~~~~~~~~~~~Ll~~~~~-~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~l 118 (238)
.+|..|.||||+|+..|+.+++++|++.+.. +..++..+..|.||||+|+..++.+++++|++.|++++.++..|.|||
T Consensus 3 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L 82 (236)
T 1ikn_D 3 QLTEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPL 82 (236)
T ss_dssp ----CCCCTTHHHHHTTCSSSSSCCCC-----CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCSCCCCTTCCCHH
T ss_pred cCCCCCCchhHHHHHcCChhHHHHHHHHhhccHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHH
Confidence 4578899999999999999999999987543 223677888999999999999999999999999999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHcCCC------CCCCCCCCCcHHHHHHhhCCHHHHHHHHhcCCCCCcccc-CCCcHHHHHHHhC
Q 026440 119 HYAASKGWLKIVELLISRGAK------INSKDKVGCTALHRGASTGNSALCELLIEEGAEVDATDK-AGQTPLMNAVICY 191 (238)
Q Consensus 119 ~~a~~~~~~~~~~~l~~~~~~------~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~-~~~t~l~~a~~~~ 191 (238)
|+|+..|+.+++++|++.+.+ ++..+..|.||||+|+..++.+++++|+++|++++.++. .|.||||+|+..+
T Consensus 83 ~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~ 162 (236)
T 1ikn_D 83 HLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQ 162 (236)
T ss_dssp HHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTT
T ss_pred HHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcC
Confidence 999999999999999999876 456778899999999999999999999999999999987 9999999999999
Q ss_pred CHHHHHHHHhcCCCCccCCCCCCchhhccccccchHHHHHHHH
Q 026440 192 NKEVALLLIRHGADVDVEDKEGYTVLGRASNDFRPILIDAAKA 234 (238)
Q Consensus 192 ~~~~~~~Ll~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~~~~ 234 (238)
+.+++++|+++|++++.+|..|.||+++|+..++.+++++|..
T Consensus 163 ~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~ 205 (236)
T 1ikn_D 163 NPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQ 205 (236)
T ss_dssp CHHHHHHHHTTTCCSCCCCTTCCCGGGGCTTSSCHHHHHHHHT
T ss_pred CHHHHHHHHHcCCCCCcccCCCCCHHHHHHccCchHHHHHHHH
Confidence 9999999999999999999999999999999999888887754
No 36
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=100.00 E-value=1.2e-38 Score=246.51 Aligned_cols=226 Identities=24% Similarity=0.290 Sum_probs=196.5
Q ss_pred cchhhh-ccChHHHHHHHcCChHHHHHHHHHHhh-------------------------------hhcCCCCCCCchHHH
Q 026440 3 MDIDQT-IKDKDLFKAAETGDSSTFKSLSKQQLL-------------------------------KSLSLRNDDDRTLLH 50 (238)
Q Consensus 3 ~~~~~~-~~~~~l~~a~~~g~~~~v~~l~~~~~~-------------------------------~~~~~~~~~~~t~L~ 50 (238)
++..+. .+.++||+|+..|+.++|+.|++.+.. .+++..+..|.||||
T Consensus 51 vn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~t~l~ 130 (337)
T 4g8k_A 51 VNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFILAAIAGSVKLLKLFLSKGADVNECDFYGFTAFM 130 (337)
T ss_dssp TTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCBCTTCCBHHH
T ss_pred CCccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCCCchhHHHHhcccchhhHHhhhccchhhhhccCCCCHHH
Confidence 444433 478899999999999999999987531 235567888999999
Q ss_pred HHHHcCCHHHHHHHHhhccccccc-------ccccCCCCcHHHHHHHcCCHHHHHHHHH-cCCCCcccCCCCchHHHHHH
Q 026440 51 VAASCGHPEVVEILLSVDESANVV-------NAVDEEGWAPIHSAASIGNVTIVEMLLS-KGADVNLKNDGGRTALHYAA 122 (238)
Q Consensus 51 ~A~~~~~~~~~~~Ll~~~~~~~~~-------~~~~~~~~t~l~~a~~~~~~~~~~~Ll~-~~~~~~~~~~~~~~~l~~a~ 122 (238)
+|+..|+.++++++++.|.+.... ...+..|.||||+|+..|+.+++++|++ .|++++.++..|.++++.++
T Consensus 131 ~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~~~v~~LL~~~gad~n~~d~~g~t~l~~~~ 210 (337)
T 4g8k_A 131 EAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHAL 210 (337)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHH
T ss_pred HHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCCCHHHHHHHHhccCCCcCccCCCCCcHHHHHH
Confidence 999999999999999988765432 2345678999999999999999999996 59999999999999999887
Q ss_pred HcCC----HHHHHHHHHcCCCCCCCCCCCCcHHHHHHhhCCHHHHHHHHhc-CCCCCccccCCCcHHHHHHHhCCHHHHH
Q 026440 123 SKGW----LKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELLIEE-GAEVDATDKAGQTPLMNAVICYNKEVAL 197 (238)
Q Consensus 123 ~~~~----~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~-~~~~~~~~~~~~t~l~~a~~~~~~~~~~ 197 (238)
..+. ..++++|+++|++++..+..|.||||.|+..++.+++++|+.. |++++.++..|.||||+|+..|+.++++
T Consensus 211 ~~~~~~~~~~i~~lLl~~gad~n~~d~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~vn~~d~~G~TpL~~A~~~g~~~iv~ 290 (337)
T 4g8k_A 211 LSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAE 290 (337)
T ss_dssp HHSCTTTHHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHTSTTCCTTCBCTTSCBHHHHHHHTTCHHHHH
T ss_pred HHcCcccHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhhhhHHHHHHHHhcCCcccCcCCCCCCHHHHHHHcCCHHHHH
Confidence 6543 4688999999999999999999999999999999999999985 8999999999999999999999999999
Q ss_pred HHHhcCCCCccCCCCCCchhhccccccchHHHHHHH
Q 026440 198 LLIRHGADVDVEDKEGYTVLGRASNDFRPILIDAAK 233 (238)
Q Consensus 198 ~Ll~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~~~ 233 (238)
+|+++|++++.. +||++|+.+++.+++++|.
T Consensus 291 ~Ll~~GAd~n~~-----~~L~~A~~~~~~~iv~~Ll 321 (337)
T 4g8k_A 291 LLCKRGASTDCG-----DLVMTARRNYDHSLVKVLL 321 (337)
T ss_dssp HHHTTSCSSTTC-----CHHHHHHHTTCHHHHHHHH
T ss_pred HHHHCCCCCCCC-----CHHHHHHHcCCHHHHHHHH
Confidence 999999998764 5999999999988877764
No 37
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=3.2e-39 Score=237.00 Aligned_cols=197 Identities=30% Similarity=0.359 Sum_probs=186.0
Q ss_pred hhhhccChHHHHHHHcCChHHHHHHHHHHhhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhhcccccccccccCCCCcH
Q 026440 5 IDQTIKDKDLFKAAETGDSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAP 84 (238)
Q Consensus 5 ~~~~~~~~~l~~a~~~g~~~~v~~l~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~t~ 84 (238)
..+..+.++||.|+..|+.+++++|++.+ .+++..+..|.||||+|+..|+.+++++|++.+.+ ++..+..|.||
T Consensus 35 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~---~~~~~~~g~t~ 109 (231)
T 3aji_A 35 RTDQDSRTALHWACSAGHTEIVEFLLQLG--VPVNDKDDAGWSPLHIAASAGXDEIVKALLVKGAH---VNAVNQNGCTP 109 (231)
T ss_dssp CCCTTSCCHHHHHHHHTCHHHHHHHHHTT--CCSCCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC---TTCCCTTSCCH
T ss_pred cCCCCCCCHHHHHHHcCcHHHHHHHHHhC--CCCCCcCCCCCCHHHHHHHcCHHHHHHHHHHcCCC---CCCCCCCCCCH
Confidence 34667889999999999999999999886 56788899999999999999999999999998877 66778899999
Q ss_pred HHHHHHcCCHHHHHHHHHcCCCCcccCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHhhCCHHHHH
Q 026440 85 IHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCE 164 (238)
Q Consensus 85 l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~ 164 (238)
||+|+..++.+++++|++.|++++..+..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..++.++++
T Consensus 110 L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~ 189 (231)
T 3aji_A 110 LHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKASTNIQDTEGNTPLHLACDEERVEEAK 189 (231)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCCHHHHHHHCCCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCCCCccccCCCcHHHHHHHhCCHHHHHHHHhcCCCC
Q 026440 165 LLIEEGAEVDATDKAGQTPLMNAVICYNKEVALLLIRHGADV 206 (238)
Q Consensus 165 ~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~ 206 (238)
+|+++|++++.++..|.||+++|+..++.+++++|.++|+++
T Consensus 190 ~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~lL~~~~a~i 231 (231)
T 3aji_A 190 FLVTQGASIYIENKEEKTPLQVAKGGLGLILKRLAEGEEASM 231 (231)
T ss_dssp HHHHTTCCSCCCCTTSCCHHHHSCHHHHHHHHHHHHHHHHCC
T ss_pred HHHHCCCCCCCCCCCCCCHHHHHHhhHHHHHHHHHccccccC
Confidence 999999999999999999999999999999999999988764
No 38
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=100.00 E-value=1.3e-38 Score=228.97 Aligned_cols=187 Identities=26% Similarity=0.396 Sum_probs=119.6
Q ss_pred CCchHHHHHHHcCCHHHHHHHHhhcccccccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCchHHHHHHH
Q 026440 44 DDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAAS 123 (238)
Q Consensus 44 ~~~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~l~~a~~ 123 (238)
.+.||||.|+..|+.+.++.|+..+. ..++..+..|.||||+|+..++.+++++|++.|++++..+..|.|||++|+.
T Consensus 4 ~~~~~L~~A~~~g~~~~v~~ll~~~~--~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~ 81 (201)
T 3hra_A 4 YEVGALLEAANQRDTKKVKEILQDTT--YQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADINLQNSISDSPYLYAGA 81 (201)
T ss_dssp CCTTHHHHHHHTTCHHHHHHHHTCTT--CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred ccccHHHHHHHhccHHHHHHHHHcCC--CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHH
Confidence 45566666666666666666665432 1244555666666666666666666666666666666666666666666666
Q ss_pred cCCHHHHHHHH-HcCCCCCCCCCCCCcHHHHHHhhCCHHHHHHHHhcC-CCCCccccCCCcHHHHHHHhCC-----HHHH
Q 026440 124 KGWLKIVELLI-SRGAKINSKDKVGCTALHRGASTGNSALCELLIEEG-AEVDATDKAGQTPLMNAVICYN-----KEVA 196 (238)
Q Consensus 124 ~~~~~~~~~l~-~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~-~~~~~~~~~~~t~l~~a~~~~~-----~~~~ 196 (238)
.|+.+++++|+ ..+.+++..+..|.||||.|+..++.+++++|+++| ++++.++..|.||||+|+..++ .+++
T Consensus 82 ~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v 161 (201)
T 3hra_A 82 QGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIV 161 (201)
T ss_dssp TTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCCSHHHHHHH
T ss_pred cCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccchhhHHHHH
Confidence 66666666666 345566666666666666666666666666666666 6666666666666666666665 6666
Q ss_pred HHHHhcCCCCccCCCCCCchhhccccccchHHHHHH
Q 026440 197 LLLIRHGADVDVEDKEGYTVLGRASNDFRPILIDAA 232 (238)
Q Consensus 197 ~~Ll~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~~ 232 (238)
++|+++|++++.+|..|.||+++|+..++.+++++|
T Consensus 162 ~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~L 197 (201)
T 3hra_A 162 KLLMENGADQSIKDNSGRTAMDYANQKGYTEISKIL 197 (201)
T ss_dssp HHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred HHHHHCCCCCCccCCCCCCHHHHHHHcCCHhHHHHH
Confidence 666666666666666666666666666665555544
No 39
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=100.00 E-value=2e-38 Score=228.00 Aligned_cols=192 Identities=24% Similarity=0.324 Sum_probs=180.7
Q ss_pred hccChHHHHHHHcCChHHHHHHHHHHhhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhhcccccccccccCCCCcHHHH
Q 026440 8 TIKDKDLFKAAETGDSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHS 87 (238)
Q Consensus 8 ~~~~~~l~~a~~~g~~~~v~~l~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~t~l~~ 87 (238)
+.+.++|+.|+..|+.+.++.|+..+ ..+++..+..|.||||+|+..|+.+++++|++.|.+ ++..+..|.|||++
T Consensus 3 ~~~~~~L~~A~~~g~~~~v~~ll~~~-~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~---~~~~~~~g~t~l~~ 78 (201)
T 3hra_A 3 TYEVGALLEAANQRDTKKVKEILQDT-TYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGAD---INLQNSISDSPYLY 78 (201)
T ss_dssp CCCTTHHHHHHHTTCHHHHHHHHTCT-TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC---TTCCCTTSCCHHHH
T ss_pred cccccHHHHHHHhccHHHHHHHHHcC-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC---CCCCCCCCCCHHHH
Confidence 46778999999999999999999887 457888899999999999999999999999998877 66678899999999
Q ss_pred HHHcCCHHHHHHHH-HcCCCCcccCCCCchHHHHHHHcCCHHHHHHHHHcC-CCCCCCCCCCCcHHHHHHhhCC-----H
Q 026440 88 AASIGNVTIVEMLL-SKGADVNLKNDGGRTALHYAASKGWLKIVELLISRG-AKINSKDKVGCTALHRGASTGN-----S 160 (238)
Q Consensus 88 a~~~~~~~~~~~Ll-~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~-~~~~~~~~~~~t~l~~a~~~~~-----~ 160 (238)
|+..++.+++++|+ ..+.+++..+..|.||||+|+..|+.+++++|++.| .+++..+..|.||||.|+..++ .
T Consensus 79 A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~~~~ 158 (201)
T 3hra_A 79 AGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQ 158 (201)
T ss_dssp HHHTTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCCSHHHH
T ss_pred HHHcCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccchhhHH
Confidence 99999999999999 567788889999999999999999999999999999 9999999999999999999998 9
Q ss_pred HHHHHHHhcCCCCCccccCCCcHHHHHHHhCCHHHHHHHHhcC
Q 026440 161 ALCELLIEEGAEVDATDKAGQTPLMNAVICYNKEVALLLIRHG 203 (238)
Q Consensus 161 ~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~ 203 (238)
+++++|+++|++++.++..|.||||+|+..++.+++++|+++|
T Consensus 159 ~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~G 201 (201)
T 3hra_A 159 DIVKLLMENGADQSIKDNSGRTAMDYANQKGYTEISKILAQYN 201 (201)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTCC
T ss_pred HHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCHhHHHHHHhcC
Confidence 9999999999999999999999999999999999999999886
No 40
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=100.00 E-value=2e-39 Score=243.90 Aligned_cols=215 Identities=22% Similarity=0.293 Sum_probs=176.1
Q ss_pred chhhhccChHHHHHHHcCChHHHHHHHHHHhhhhcC------CCCCCCchHHHHHHHc---CCHHHHHHHHhhcccccc-
Q 026440 4 DIDQTIKDKDLFKAAETGDSSTFKSLSKQQLLKSLS------LRNDDDRTLLHVAASC---GHPEVVEILLSVDESANV- 73 (238)
Q Consensus 4 ~~~~~~~~~~l~~a~~~g~~~~v~~l~~~~~~~~~~------~~~~~~~t~L~~A~~~---~~~~~~~~Ll~~~~~~~~- 73 (238)
+..+..+.++||.|+..|+.++|+.|++.+...... ..+..|.||||+|+.. |+.+++++|++.+.....
T Consensus 7 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~ 86 (273)
T 2pnn_A 7 KPPRLYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSL 86 (273)
T ss_dssp ----CCCHHHHHHHHHTTCSSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCH
T ss_pred CCCCcccchHHHHHHHcCCHHHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccch
Confidence 345677889999999999999999999876432222 3477899999999987 999999999998765321
Q ss_pred -------cccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCC--------------CCchHHHHHHHcCCHHHHHH
Q 026440 74 -------VNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKND--------------GGRTALHYAASKGWLKIVEL 132 (238)
Q Consensus 74 -------~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~--------------~~~~~l~~a~~~~~~~~~~~ 132 (238)
....+..|.||||+|+..|+.+++++|+++|++++..+. .|.||||+|+..|+.+++++
T Consensus 87 ~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~ 166 (273)
T 2pnn_A 87 KQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKF 166 (273)
T ss_dssp HHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHH
T ss_pred hHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccccccccccccccccccCCCCHHHHHHHcCCHHHHHH
Confidence 122566899999999999999999999999999998886 79999999999999999999
Q ss_pred HHH---cCCCCCCCCCCCCcHHHHHHhhCC---------HHHHHHHHhcCCCCC-------ccccCCCcHHHHHHHhCCH
Q 026440 133 LIS---RGAKINSKDKVGCTALHRGASTGN---------SALCELLIEEGAEVD-------ATDKAGQTPLMNAVICYNK 193 (238)
Q Consensus 133 l~~---~~~~~~~~~~~~~t~l~~a~~~~~---------~~~~~~Ll~~~~~~~-------~~~~~~~t~l~~a~~~~~~ 193 (238)
|++ .|++++..|..|.||||+|+..++ .+++++|+++|++++ .++..|.||||+|+..|+.
T Consensus 167 Ll~~~~~gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~~g~TpL~~A~~~g~~ 246 (273)
T 2pnn_A 167 LLQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALAASSGKI 246 (273)
T ss_dssp HHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCH
T ss_pred HHhcccCCCCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcccccccccccCCCCCCHHHHHHHhChH
Confidence 999 999999999999999999999988 799999999999886 4899999999999999999
Q ss_pred HHHHHHHhcCC-CCccCCCCCCchhh
Q 026440 194 EVALLLIRHGA-DVDVEDKEGYTVLG 218 (238)
Q Consensus 194 ~~~~~Ll~~~~-~~~~~~~~g~tpl~ 218 (238)
+++++|+++|+ ++......+.+|-+
T Consensus 247 ~iv~~Ll~~ga~dp~~~~~~~~~~~~ 272 (273)
T 2pnn_A 247 GVLAYILQREIHEPECRHAAAHHHHH 272 (273)
T ss_dssp HHHHHHHHHHTC--------------
T ss_pred HHHHHHHHCCCCCchhhhhhhhhccC
Confidence 99999999999 88888777776643
No 41
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=3.5e-38 Score=230.98 Aligned_cols=187 Identities=29% Similarity=0.309 Sum_probs=173.8
Q ss_pred CchHHHHHHHcCCHHHHHHHHhhcccccccccccCCCCcHHHHHHHcCCHHHHHHHHHcC--CCCcc-cCCCCchHHHHH
Q 026440 45 DRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSKG--ADVNL-KNDGGRTALHYA 121 (238)
Q Consensus 45 ~~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~--~~~~~-~~~~~~~~l~~a 121 (238)
|.||||+|+..|+.+++++|++.+... ....+..|.||||+|+..|+.+++++|++.| .+++. .+..|.|||++|
T Consensus 2 g~t~L~~A~~~g~~~~v~~Ll~~~~~~--~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A 79 (228)
T 2dzn_A 2 SNYPLHQACMENEFFKVQELLHSKPSL--LLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIA 79 (228)
T ss_dssp -CCHHHHHHHTTCHHHHHHHHHHCGGG--TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHH
T ss_pred CccHHHHHHHhCCHHHHHHHHhcCccc--cccCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHH
Confidence 689999999999999999999977552 3447889999999999999999999999999 55555 678899999999
Q ss_pred HHcCCHHHHHHHHHcC--CCCCCCCCCCCcHHHHHHhhCCHHHHHHHHhcCCCCCccccCCCcHHHHHHHhCCHHHHHHH
Q 026440 122 ASKGWLKIVELLISRG--AKINSKDKVGCTALHRGASTGNSALCELLIEEGAEVDATDKAGQTPLMNAVICYNKEVALLL 199 (238)
Q Consensus 122 ~~~~~~~~~~~l~~~~--~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L 199 (238)
+..|+.+++++|++.| .+++..+..|.||||.|+..++.+++++|+++|++++.++..|.||||+|+..++.+++++|
T Consensus 80 ~~~~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~L 159 (228)
T 2dzn_A 80 CSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELL 159 (228)
T ss_dssp HHHCCHHHHHHHHSSSSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred HHcCCHHHHHHHHhCCCCcccccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHH
Confidence 9999999999999998 88888999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcC-CCCccCCCCCCchhhccccccchHHHHHHH
Q 026440 200 IRHG-ADVDVEDKEGYTVLGRASNDFRPILIDAAK 233 (238)
Q Consensus 200 l~~~-~~~~~~~~~g~tpl~~a~~~~~~~~~~~~~ 233 (238)
+++| ++++.+|..|.||||+|+..++.+++++|.
T Consensus 160 l~~g~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll 194 (228)
T 2dzn_A 160 CGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLV 194 (228)
T ss_dssp HTTTCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred HhcCcccccCcCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 9999 999999999999999999999988887765
No 42
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=100.00 E-value=4.1e-40 Score=257.83 Aligned_cols=221 Identities=26% Similarity=0.305 Sum_probs=196.8
Q ss_pred hhhccChHHHHHHHcCChHHHHHHHHHHhhhhcCCCC-CCCchHHHHHHHcCCHHHHHHHH--------hhccccccccc
Q 026440 6 DQTIKDKDLFKAAETGDSSTFKSLSKQQLLKSLSLRN-DDDRTLLHVAASCGHPEVVEILL--------SVDESANVVNA 76 (238)
Q Consensus 6 ~~~~~~~~l~~a~~~g~~~~v~~l~~~~~~~~~~~~~-~~~~t~L~~A~~~~~~~~~~~Ll--------~~~~~~~~~~~ 76 (238)
++..+.++||.|+..| .++++.|+. .+++..+ ..|.||||+|+..|+.+++++|+ +.|.+ ++.
T Consensus 90 ~~~~g~t~L~~Aa~~~-~~~~~~L~~----~~~n~~d~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~ga~---vn~ 161 (373)
T 2fo1_E 90 PEPESPIKLHTEAAGS-YAITEPITR----ESVNIIDPRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGAD---VNA 161 (373)
T ss_dssp ----CCCHHHHHHHSS-SCCCSCCST----TTTTTCCCSSCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCC---TTC
T ss_pred CCCCCccHHHHHhcCC-chHHHHhcc----ccccccCCcCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHhcCCC---CcC
Confidence 3566788899999955 578888754 3567777 68999999999999998888876 55665 677
Q ss_pred ccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCchHHHHHHHcCCHHHHHHHHHcC---CCCCCCCCCCCcHHHH
Q 026440 77 VDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRG---AKINSKDKVGCTALHR 153 (238)
Q Consensus 77 ~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~---~~~~~~~~~~~t~l~~ 153 (238)
.+..|.||||+|+..|+.+++++|+++|++++..+..|.|||++|+..|+.+++++|++.+ .+++..+..|.||||+
T Consensus 162 ~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~t~L~~ 241 (373)
T 2fo1_E 162 MDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMI 241 (373)
T ss_dssp CCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHHH
T ss_pred CCCCCCCHHHHHHHcChHHHHHHHHHCCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHhcCccccChhhcCCCCCCHHHH
Confidence 8899999999999999999999999999999999999999999999999999999999987 7899999999999999
Q ss_pred HHhhC---CHHHHHHHHhcCCCCCc--------cccCCCcHHHHHHHhCCHHHHHHHHhcC-CCCccCCCCCCchhhccc
Q 026440 154 GASTG---NSALCELLIEEGAEVDA--------TDKAGQTPLMNAVICYNKEVALLLIRHG-ADVDVEDKEGYTVLGRAS 221 (238)
Q Consensus 154 a~~~~---~~~~~~~Ll~~~~~~~~--------~~~~~~t~l~~a~~~~~~~~~~~Ll~~~-~~~~~~~~~g~tpl~~a~ 221 (238)
|+..+ +.+++++|+++|++++. .+..|.||||+|+..|+.+++++|++++ ++++.+|..|.||||+|+
T Consensus 242 A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A~ 321 (373)
T 2fo1_E 242 VAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAA 321 (373)
T ss_dssp HHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHH
T ss_pred HHHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHHHHHH
Confidence 99998 89999999999999886 5668999999999999999999999886 999999999999999999
Q ss_pred cccchHHHHHHHH
Q 026440 222 NDFRPILIDAAKA 234 (238)
Q Consensus 222 ~~~~~~~~~~~~~ 234 (238)
..++.+++++|..
T Consensus 322 ~~g~~~iv~~Ll~ 334 (373)
T 2fo1_E 322 QEGRIEVVMYLIQ 334 (373)
T ss_dssp HHTCHHHHHHHHH
T ss_pred HcCCHHHHHHHHH
Confidence 9999888887754
No 43
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=100.00 E-value=5.3e-38 Score=218.84 Aligned_cols=160 Identities=43% Similarity=0.608 Sum_probs=141.5
Q ss_pred hHHHHHHHcCCHHHHHHHHhhcccccccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCchHHHHHHHcCC
Q 026440 47 TLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGW 126 (238)
Q Consensus 47 t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~ 126 (238)
++|+.||+.|+.+++++|++.|.+ ++.++..|+|||++|+..++.+++++|++.|++++.++..|.||||+|+..|+
T Consensus 6 ~~L~~Aa~~G~~~~v~~Ll~~Gad---vn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~~d~~g~TpLh~A~~~g~ 82 (169)
T 4gpm_A 6 KRLIEAAENGNKDRVKDLIENGAD---VNASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGH 82 (169)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCC---TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred HHHHHHHHcCCHHHHHHHHHCCCC---CCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhhhccCCCCHHHHHHHcCC
Confidence 468899999999999999988877 67778899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCCCCCCCCcHHHHHHhhCCHHHHHHHHhcCCCCCccccCCCcHHHHHHHhCCHHHHHHHHhcCCCC
Q 026440 127 LKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELLIEEGAEVDATDKAGQTPLMNAVICYNKEVALLLIRHGADV 206 (238)
Q Consensus 127 ~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~ 206 (238)
.+++++|+++|++++..|..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..++.+++++|+++|+++
T Consensus 83 ~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GA~i 162 (169)
T 4gpm_A 83 KEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNTSDSDGRTPLDLAREHGNEEVVKLLEKQGGWL 162 (169)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC----
T ss_pred HHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred ccC
Q 026440 207 DVE 209 (238)
Q Consensus 207 ~~~ 209 (238)
+..
T Consensus 163 e~~ 165 (169)
T 4gpm_A 163 EHH 165 (169)
T ss_dssp ---
T ss_pred CCC
Confidence 754
No 44
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=100.00 E-value=1.5e-38 Score=237.00 Aligned_cols=200 Identities=23% Similarity=0.291 Sum_probs=161.8
Q ss_pred ccChHHHHHHHcCChHHHHHHHHHHh--hhhcCC----CCCCCchHHHHHHHc---CCHHHHHHHHhhcccccccc----
Q 026440 9 IKDKDLFKAAETGDSSTFKSLSKQQL--LKSLSL----RNDDDRTLLHVAASC---GHPEVVEILLSVDESANVVN---- 75 (238)
Q Consensus 9 ~~~~~l~~a~~~g~~~~v~~l~~~~~--~~~~~~----~~~~~~t~L~~A~~~---~~~~~~~~Ll~~~~~~~~~~---- 75 (238)
++.++||.|+..|+.+.|+.|++... ..+++. .+..|.||||+|+.. |+.+++++|++.+.......
T Consensus 1 ~G~t~L~~A~~~g~~~~v~~ll~~l~~~g~~i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~ 80 (256)
T 2etb_A 1 FDRDRLFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVN 80 (256)
T ss_dssp CCHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGG
T ss_pred CCccHHHHHHHcCCHHHHHHHHHHHHHcCCCcccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhcc
Confidence 35788999999999986655554211 245666 788899999999999 99999999999887754222
Q ss_pred ----cccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCC-------------CchHHHHHHHcCCHHHHHHHHH---
Q 026440 76 ----AVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDG-------------GRTALHYAASKGWLKIVELLIS--- 135 (238)
Q Consensus 76 ----~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~-------------~~~~l~~a~~~~~~~~~~~l~~--- 135 (238)
..+..|.||||+|+..|+.+++++|+++|++++..+.. |.||||+|+..|+.+++++|++
T Consensus 81 ~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~ 160 (256)
T 2etb_A 81 AQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPH 160 (256)
T ss_dssp CCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSS
T ss_pred cccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccc
Confidence 23467899999999999999999999999998887765 8888888888888888888888
Q ss_pred cCCCCCCCCCCCCcHHHHHHh--hCCHH-------HHHHHHhcCCCC-------CccccCCCcHHHHHHHhCCHHHHHHH
Q 026440 136 RGAKINSKDKVGCTALHRGAS--TGNSA-------LCELLIEEGAEV-------DATDKAGQTPLMNAVICYNKEVALLL 199 (238)
Q Consensus 136 ~~~~~~~~~~~~~t~l~~a~~--~~~~~-------~~~~Ll~~~~~~-------~~~~~~~~t~l~~a~~~~~~~~~~~L 199 (238)
.|++++..|..|.||||+|+. .++.+ ++++|+++|+++ +.++..|.||||+|+..|+.+++++|
T Consensus 161 ~ga~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~L 240 (256)
T 2etb_A 161 QPASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARLCPTVQLEEISNHQGLTPLKLAAKEGKIEIFRHI 240 (256)
T ss_dssp CCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHSTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred cCCCcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCcccccccccccCCCCCCHHHHHHHhCCHHHHHHH
Confidence 888888888888888888888 67777 888888888888 77888888888888888888888888
Q ss_pred HhcCCCCcc
Q 026440 200 IRHGADVDV 208 (238)
Q Consensus 200 l~~~~~~~~ 208 (238)
+++|++...
T Consensus 241 l~~g~~~~~ 249 (256)
T 2etb_A 241 LQREFSGAA 249 (256)
T ss_dssp HHHHHHHHH
T ss_pred HhCCCCCCC
Confidence 888776543
No 45
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=100.00 E-value=3.7e-38 Score=234.83 Aligned_cols=187 Identities=26% Similarity=0.273 Sum_probs=170.6
Q ss_pred CchHHHHHHHcCCHH----HHHHHHhhccccccccc----ccCCCCcHHHHHHHc---CCHHHHHHHHHcCCCCccc---
Q 026440 45 DRTLLHVAASCGHPE----VVEILLSVDESANVVNA----VDEEGWAPIHSAASI---GNVTIVEMLLSKGADVNLK--- 110 (238)
Q Consensus 45 ~~t~L~~A~~~~~~~----~~~~Ll~~~~~~~~~~~----~~~~~~t~l~~a~~~---~~~~~~~~Ll~~~~~~~~~--- 110 (238)
|+||||.|+..|+.+ ++++|++.+.+ ++. .+..|+||||+|+.. |+.+++++|++.|++++..
T Consensus 2 G~t~L~~A~~~g~~~~v~~ll~~l~~~g~~---i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~ 78 (256)
T 2etb_A 2 DRDRLFSVVSRGVPEELTGLLEYLRWNSKY---LTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPL 78 (256)
T ss_dssp CHHHHHHHHHHTCGGGGTTHHHHHHHHTCC---TTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCG
T ss_pred CccHHHHHHHcCCHHHHHHHHHHHHHcCCC---cccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhh
Confidence 789999999999997 56777777776 555 688999999999999 9999999999998766532
Q ss_pred --------CCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCC-------------CCcHHHHHHhhCCHHHHHHHHh-
Q 026440 111 --------NDGGRTALHYAASKGWLKIVELLISRGAKINSKDKV-------------GCTALHRGASTGNSALCELLIE- 168 (238)
Q Consensus 111 --------~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~-------------~~t~l~~a~~~~~~~~~~~Ll~- 168 (238)
+..|.||||+|+..|+.+++++|+++|++++..+.. |.||||+|+..|+.+++++|++
T Consensus 79 ~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ 158 (256)
T 2etb_A 79 VNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLEN 158 (256)
T ss_dssp GGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHC
T ss_pred cccccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhc
Confidence 367999999999999999999999999999998876 9999999999999999999999
Q ss_pred --cCCCCCccccCCCcHHHHHHH--hCCHH-------HHHHHHhcCCCC-------ccCCCCCCchhhccccccchHHHH
Q 026440 169 --EGAEVDATDKAGQTPLMNAVI--CYNKE-------VALLLIRHGADV-------DVEDKEGYTVLGRASNDFRPILID 230 (238)
Q Consensus 169 --~~~~~~~~~~~~~t~l~~a~~--~~~~~-------~~~~Ll~~~~~~-------~~~~~~g~tpl~~a~~~~~~~~~~ 230 (238)
+|++++.++..|.||||+|+. .++.+ ++++|+++|+++ +.+|..|.||||+|+..++.++++
T Consensus 159 ~~~ga~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~ 238 (256)
T 2etb_A 159 PHQPASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARLCPTVQLEEISNHQGLTPLKLAAKEGKIEIFR 238 (256)
T ss_dssp SSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHSTTCCGGGCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred cccCCCcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCcccccccccccCCCCCCHHHHHHHhCCHHHHH
Confidence 999999999999999999999 78888 999999999999 999999999999999999988888
Q ss_pred HHHH
Q 026440 231 AAKA 234 (238)
Q Consensus 231 ~~~~ 234 (238)
+|..
T Consensus 239 ~Ll~ 242 (256)
T 2etb_A 239 HILQ 242 (256)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 7754
No 46
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=100.00 E-value=4.3e-38 Score=239.48 Aligned_cols=216 Identities=27% Similarity=0.330 Sum_probs=189.2
Q ss_pred HHHHcCChHHHHHHHHHHhhhh-------cCCCCCCCchHHHHHHHcCCHHHHHHHHhhcccccccccccCCCCcHHHHH
Q 026440 16 KAAETGDSSTFKSLSKQQLLKS-------LSLRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSA 88 (238)
Q Consensus 16 ~a~~~g~~~~v~~l~~~~~~~~-------~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~t~l~~a 88 (238)
.++..+..+.++.++....... ....+..+.||||.||..|+.+++++|++.|.+ ++..+..|.||||+|
T Consensus 4 ~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~---~~~~~~~g~t~L~~A 80 (299)
T 1s70_B 4 ADAKQKRNEQLKRWIGSETDLEPPVVKRKKTKVKFDDGAVFLAACSSGDTEEVLRLLERGAD---INYANVDGLTALHQA 80 (299)
T ss_dssp HHHHHHHHHHHHHHHHTTTSSCCSCCCCSCCCCEECHHHHHHHHHHHTCHHHHHHHHHHCCC---TTCBCTTCCBHHHHH
T ss_pred hHHHHHHHHHHHHHHccccccccccccCcccccccCCccHHHHHHHcCCHHHHHHHHHcCCC---CcccCCCCCCHHHHH
Confidence 4677888888888887652211 112233567999999999999999999998877 677788999999999
Q ss_pred HHcCCHHHHHHHHHcCCCCcccCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHhhCCHHHHHHHHh
Q 026440 89 ASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELLIE 168 (238)
Q Consensus 89 ~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~ 168 (238)
+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|+++|++++..+..|.||+++|+..+..+++++++.
T Consensus 81 ~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~ll~ 160 (299)
T 1s70_B 81 CIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVN 160 (299)
T ss_dssp HHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHhcchHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999988775
Q ss_pred c-CCCCC--------------------------ccccCCCcHHHHHHHhCCHHHHHHHHhcCCCCccCCCCCCchhhccc
Q 026440 169 E-GAEVD--------------------------ATDKAGQTPLMNAVICYNKEVALLLIRHGADVDVEDKEGYTVLGRAS 221 (238)
Q Consensus 169 ~-~~~~~--------------------------~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpl~~a~ 221 (238)
. +.+++ ..+..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpL~~A~ 240 (299)
T 1s70_B 161 RQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAA 240 (299)
T ss_dssp HHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHH
T ss_pred hcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHH
Confidence 3 44432 24567999999999999999999999999999999999999999999
Q ss_pred cccchHHHHHHHH
Q 026440 222 NDFRPILIDAAKA 234 (238)
Q Consensus 222 ~~~~~~~~~~~~~ 234 (238)
..++.+++++|..
T Consensus 241 ~~~~~~~v~~Ll~ 253 (299)
T 1s70_B 241 HWGKEEACRILVE 253 (299)
T ss_dssp HTTCHHHHHHHHH
T ss_pred hcCCHHHHHHHHH
Confidence 9999888877654
No 47
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=7.5e-38 Score=234.27 Aligned_cols=194 Identities=24% Similarity=0.359 Sum_probs=152.9
Q ss_pred CCCCCCchHHHHHHHcCCHHHHHHHHhhccccc-----ccccccCCCCcHHHHHHHcCCH-HHHHHHHHcCCCCcccCCC
Q 026440 40 LRNDDDRTLLHVAASCGHPEVVEILLSVDESAN-----VVNAVDEEGWAPIHSAASIGNV-TIVEMLLSKGADVNLKNDG 113 (238)
Q Consensus 40 ~~~~~~~t~L~~A~~~~~~~~~~~Ll~~~~~~~-----~~~~~~~~~~t~l~~a~~~~~~-~~~~~Ll~~~~~~~~~~~~ 113 (238)
.+|..+.++|+.||..|+.+++++|++.+.... .++..+..+.+||+.|+..+.. .+++.|++.|++++.++..
T Consensus 6 kkd~~~~~~L~~A~~~G~~~~v~~LL~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~Gadvn~~d~~ 85 (269)
T 4b93_B 6 KKDYREVEKLLRAVADGDLEMVRYLLEWTEEDLEDAEDTVSAADPEFCHPLCQCPKCAPAQKRLAKVPASGLGVNVTSQD 85 (269)
T ss_dssp -CCCHHHHHHHHHHHTTCHHHHHHHHTCC----------------------------------------CCCCTTCCCTT
T ss_pred ccCccchhHHHHHHHcCCHHHHHHHHHCCCcccccccccccccCccCCCHHHHHHHhCCHHHHHHHHHHCCCCCCCcCCC
Confidence 346677899999999999999999998765421 2455667899999999988765 4889999999999999999
Q ss_pred CchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHhhCCHHHHHHHHhcCCCCCccccCCCcHHHHHHHhCCH
Q 026440 114 GRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELLIEEGAEVDATDKAGQTPLMNAVICYNK 193 (238)
Q Consensus 114 ~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~ 193 (238)
|.||||+|+..|+.+++++|++.+++++..+..|.||++.|+..++.+++++|++.|++++.++..|.||||+|+..|+.
T Consensus 86 G~TpLh~A~~~g~~~~v~~Ll~~~a~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n~~d~~g~TpL~~A~~~g~~ 165 (269)
T 4b93_B 86 GSSPLHVAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGHFQVVKCLLDSNAKPNKKDLSGNTPLIYACSGGHH 165 (269)
T ss_dssp SCCHHHHHHHTTCTTHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCG
T ss_pred CCCHHHHHHHcCcHHHHHHHHhcCCCcCccCCCCCCccccccccChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCccCCCCCCchhhccccccchHHHHHHH
Q 026440 194 EVALLLIRHGADVDVEDKEGYTVLGRASNDFRPILIDAAK 233 (238)
Q Consensus 194 ~~~~~Ll~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~~~ 233 (238)
+++++|+++|++++.++..|.||||+|+..++.+++++|.
T Consensus 166 ~~v~~Ll~~gadvn~~~~~g~t~Lh~A~~~g~~~~v~~Ll 205 (269)
T 4b93_B 166 ELVALLLQHGASINASNNKGNTALHEAVIEKHVFVVELLL 205 (269)
T ss_dssp GGHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHHHH
Confidence 9999999999999999999999999999999988877764
No 48
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=100.00 E-value=1.8e-36 Score=223.35 Aligned_cols=203 Identities=29% Similarity=0.305 Sum_probs=180.4
Q ss_pred ccchhhhccChHHHHHHHcCChHHHHHHHHHHhhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhhcccccccccccCCC
Q 026440 2 DMDIDQTIKDKDLFKAAETGDSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEG 81 (238)
Q Consensus 2 ~~~~~~~~~~~~l~~a~~~g~~~~v~~l~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~ 81 (238)
+++..+..+.++|+.|+..|+.+++++|++.+. ......+..|.||||+|+..|+.+++++|++.+.. .+..+..|
T Consensus 34 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~-~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~---~~~~~~~g 109 (240)
T 3eu9_A 34 DVRQPDKENVTLLHWAAINNRIDLVKYYISKGA-IVDQLGGDLNSTPLHWATRQGHLSMVVQLMKYGAD---PSLIDGEG 109 (240)
T ss_dssp CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC-CTTCCBTTTTBCHHHHHHHHTCHHHHHHHHHTTCC---TTCCCTTS
T ss_pred CcCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCC-cchhhcCCcCCChhHHHHHcCCHHHHHHHHHcCCC---CcccCCCC
Confidence 344556778889999999999999999999872 22334455699999999999999999999998877 56678899
Q ss_pred CcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCchHHHHHHHcCC-HHHHHHHHHcCCCCCCCCC-CCCcHHHHHHhhCC
Q 026440 82 WAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGW-LKIVELLISRGAKINSKDK-VGCTALHRGASTGN 159 (238)
Q Consensus 82 ~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~-~~~~~~l~~~~~~~~~~~~-~~~t~l~~a~~~~~ 159 (238)
.|||++|+..++.+++++|++.|++++..+..|.||+++|+..+. .+++++|++.|++++..+. .|.||||.|+..++
T Consensus 110 ~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~L~~~~~~~~~~~~~~g~t~L~~A~~~~~ 189 (240)
T 3eu9_A 110 CSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTRLLLTFNVSVNLGDKYHKNTALHWAVLAGN 189 (240)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCSSTTHHHHHHTTCCTTCCCTTTCCCHHHHHHHHTC
T ss_pred CCHHHHHHHcCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCChHHHHHHHHhcCCCcchhhccCCCcHHHHHHHcCC
Confidence 999999999999999999999999999999999999999997765 8999999999999999887 89999999999999
Q ss_pred HHHHHHHHhcCCCCCccccCCCcHHHHHHHhCCHHHHHHHHhcCCCCcc
Q 026440 160 SALCELLIEEGAEVDATDKAGQTPLMNAVICYNKEVALLLIRHGADVDV 208 (238)
Q Consensus 160 ~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~ 208 (238)
.+++++|+++|++++..+..|.||+++|+..++.+++++|++++++...
T Consensus 190 ~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~L~~~~~~~~~ 238 (240)
T 3eu9_A 190 TTVISLLLEAGANVDAQNIKGESALDLAKQRKNVWMINHLQEARQAKGY 238 (240)
T ss_dssp HHHHHHHHHHTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHHC-----
T ss_pred HHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHhhhccCc
Confidence 9999999999999999999999999999999999999999999887654
No 49
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=100.00 E-value=1.1e-36 Score=212.21 Aligned_cols=151 Identities=42% Similarity=0.578 Sum_probs=146.8
Q ss_pred cHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHhhCCHHH
Q 026440 83 APIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSAL 162 (238)
Q Consensus 83 t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~ 162 (238)
+.|+.|++.|+.+++++|++.|++++.++..|.||+++|+..++.+++++|++.|++++..+..|.||||+|+..|+.++
T Consensus 6 ~~L~~Aa~~G~~~~v~~Ll~~Gadvn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~~d~~g~TpLh~A~~~g~~~~ 85 (169)
T 4gpm_A 6 KRLIEAAENGNKDRVKDLIENGADVNASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEV 85 (169)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhhhccCCCCHHHHHHHcCCHHH
Confidence 36899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCCccccCCCcHHHHHHHhCCHHHHHHHHhcCCCCccCCCCCCchhhccccccchHHHHHHH
Q 026440 163 CELLIEEGAEVDATDKAGQTPLMNAVICYNKEVALLLIRHGADVDVEDKEGYTVLGRASNDFRPILIDAAK 233 (238)
Q Consensus 163 ~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~~~ 233 (238)
+++|+++|++++.++.+|+||||+|+..|+.+++++|+++|++++.+|.+|+|||++|+..++.+++++|.
T Consensus 86 v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll 156 (169)
T 4gpm_A 86 VKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNTSDSDGRTPLDLAREHGNEEVVKLLE 156 (169)
T ss_dssp HHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHCcCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999988887765
No 50
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=100.00 E-value=1.3e-37 Score=233.94 Aligned_cols=197 Identities=22% Similarity=0.246 Sum_probs=170.2
Q ss_pred cCCCCCCCchHHHHHHHcCCHHHHHHHHhhccccc-ccc----cccCCCCcHHHHHHHc---CCHHHHHHHHHcCCCC--
Q 026440 38 LSLRNDDDRTLLHVAASCGHPEVVEILLSVDESAN-VVN----AVDEEGWAPIHSAASI---GNVTIVEMLLSKGADV-- 107 (238)
Q Consensus 38 ~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~~~~~~-~~~----~~~~~~~t~l~~a~~~---~~~~~~~~Ll~~~~~~-- 107 (238)
.+..+..|.||||.|+..|+.++++.|++.+.... .++ ..+..|+||||+|+.. |+.+++++|++.|++.
T Consensus 6 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~ 85 (273)
T 2pnn_A 6 EKPPRLYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDS 85 (273)
T ss_dssp -----CCCHHHHHHHHHTTCSSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTC
T ss_pred CCCCCcccchHHHHHHHcCCHHHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccc
Confidence 44568889999999999999999999987543211 122 3478999999999987 9999999999987542
Q ss_pred -----c----ccCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCC--------------CCCcHHHHHHhhCCHHHHH
Q 026440 108 -----N----LKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDK--------------VGCTALHRGASTGNSALCE 164 (238)
Q Consensus 108 -----~----~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~--------------~~~t~l~~a~~~~~~~~~~ 164 (238)
+ ..+..|.||||+|+..|+.+++++|+++|++++..+. .|.||||+|+..++.++++
T Consensus 86 ~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~ 165 (273)
T 2pnn_A 86 LKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVK 165 (273)
T ss_dssp HHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHH
T ss_pred hhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccccccccccccccccccCCCCHHHHHHHcCCHHHHH
Confidence 1 2456899999999999999999999999999999887 7999999999999999999
Q ss_pred HHHh---cCCCCCccccCCCcHHHHHHHhCC---------HHHHHHHHhcCCCCc-------cCCCCCCchhhccccccc
Q 026440 165 LLIE---EGAEVDATDKAGQTPLMNAVICYN---------KEVALLLIRHGADVD-------VEDKEGYTVLGRASNDFR 225 (238)
Q Consensus 165 ~Ll~---~~~~~~~~~~~~~t~l~~a~~~~~---------~~~~~~Ll~~~~~~~-------~~~~~g~tpl~~a~~~~~ 225 (238)
+|++ .|++++.++..|+||||+|+..++ .+++++|+++|++++ .+|..|.|||++|+..++
T Consensus 166 ~Ll~~~~~gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~~g~TpL~~A~~~g~ 245 (273)
T 2pnn_A 166 FLLQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALAASSGK 245 (273)
T ss_dssp HHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTC
T ss_pred HHHhcccCCCCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcccccccccccCCCCCCHHHHHHHhCh
Confidence 9999 999999999999999999999988 899999999999986 589999999999999999
Q ss_pred hHHHHHHHH
Q 026440 226 PILIDAAKA 234 (238)
Q Consensus 226 ~~~~~~~~~ 234 (238)
.+++++|..
T Consensus 246 ~~iv~~Ll~ 254 (273)
T 2pnn_A 246 IGVLAYILQ 254 (273)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 888887753
No 51
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=100.00 E-value=2e-37 Score=231.40 Aligned_cols=201 Identities=25% Similarity=0.305 Sum_probs=169.2
Q ss_pred hccChHHHHHHHcCChHHHHHHHHHHh--hhhcCCCC----CCCchHHHHHH---HcCCHHHHHHHHhhcccccc-----
Q 026440 8 TIKDKDLFKAAETGDSSTFKSLSKQQL--LKSLSLRN----DDDRTLLHVAA---SCGHPEVVEILLSVDESANV----- 73 (238)
Q Consensus 8 ~~~~~~l~~a~~~g~~~~v~~l~~~~~--~~~~~~~~----~~~~t~L~~A~---~~~~~~~~~~Ll~~~~~~~~----- 73 (238)
.++.+.|+.|+..|+.+.++.|++... +.+++..+ ..|.||||+|+ ..|+.+++++|++.+..+..
T Consensus 3 ~~~~~~L~~A~~~g~~~~v~~ll~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~ 82 (260)
T 3jxi_A 3 VFNRPILFDIVSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFI 82 (260)
T ss_dssp CCCHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHH
T ss_pred cchHHHHHHHHHhCCHHHHHHHHHHHHhcCCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhh
Confidence 467789999999999998777776321 23344333 66999999999 67999999999998764321
Q ss_pred ---cccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccC--------------CCCchHHHHHHHcCCHHHHHHHHH-
Q 026440 74 ---VNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKN--------------DGGRTALHYAASKGWLKIVELLIS- 135 (238)
Q Consensus 74 ---~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~--------------~~~~~~l~~a~~~~~~~~~~~l~~- 135 (238)
....+..|+||||+|+..|+.+++++|+++|++++..+ ..|.||||+|+..|+.+++++|++
T Consensus 83 ~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~ 162 (260)
T 3jxi_A 83 NSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTEN 162 (260)
T ss_dssp TCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHC
T ss_pred cccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhc
Confidence 33445589999999999999999999999999999887 579999999999999999999999
Q ss_pred --cCCCCCCCCCCCCcHHHHHHhhCC---------HHHHHHHHhcCCCC-------CccccCCCcHHHHHHHhCCHHHHH
Q 026440 136 --RGAKINSKDKVGCTALHRGASTGN---------SALCELLIEEGAEV-------DATDKAGQTPLMNAVICYNKEVAL 197 (238)
Q Consensus 136 --~~~~~~~~~~~~~t~l~~a~~~~~---------~~~~~~Ll~~~~~~-------~~~~~~~~t~l~~a~~~~~~~~~~ 197 (238)
.|++++..|..|.||||+|+..++ .+++++|+++|+++ +..+..|.||||+|+..|+.++++
T Consensus 163 ~~~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~ 242 (260)
T 3jxi_A 163 GHKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMAAKTGKIGIFQ 242 (260)
T ss_dssp SSCCCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred cccCCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccchhhcccCCCCCHHHHHHHcCCHHHHH
Confidence 899999999999999999998877 68999999999888 668889999999999999999999
Q ss_pred HHHhcCCCCcc
Q 026440 198 LLIRHGADVDV 208 (238)
Q Consensus 198 ~Ll~~~~~~~~ 208 (238)
+|+++|+++..
T Consensus 243 ~Ll~~g~~~~~ 253 (260)
T 3jxi_A 243 HIIRREIADAA 253 (260)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHhCCCccc
Confidence 99998776543
No 52
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=100.00 E-value=1.5e-37 Score=239.16 Aligned_cols=198 Identities=20% Similarity=0.138 Sum_probs=162.9
Q ss_pred HHHHHHcCChHHHHHHHHHHhhhhcCC-CCCCCchHHHHHHHcCCHHHHHHHHhhcccccccccccCCCCcHHHHHHHcC
Q 026440 14 LFKAAETGDSSTFKSLSKQQLLKSLSL-RNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIG 92 (238)
Q Consensus 14 l~~a~~~g~~~~v~~l~~~~~~~~~~~-~~~~~~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~t~l~~a~~~~ 92 (238)
.+.|+..+..++++.|++.+ .+++. .+..|+||||+|+..|+.+++++|++.|.+ ++..+..|+||||+|+..|
T Consensus 101 ~~~a~~~~~~~~~~~l~~~g--~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad---~n~~d~~g~TpLh~A~~~g 175 (327)
T 1sw6_A 101 QHVSFDSLLQEVNDAFPNTQ--LNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSN---RLYGDNMGESCLVKAVKSV 175 (327)
T ss_dssp ---CHHHHHHHHHHHCTTSC--CCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCC---TTBCCTTCCCHHHHHHHSS
T ss_pred hHHHHHhhHHHHHHHHHhcC--CCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC---CCCcCCCCCCHHHHHHHhc
Confidence 35666666667777776654 56777 799999999999999999999999999887 6778899999999999998
Q ss_pred C---HHHHHHHHHcC-CCCcccCCCCchHHHHHHH----cCCHHHHHHHHHc--------------------CCCCCCCC
Q 026440 93 N---VTIVEMLLSKG-ADVNLKNDGGRTALHYAAS----KGWLKIVELLISR--------------------GAKINSKD 144 (238)
Q Consensus 93 ~---~~~~~~Ll~~~-~~~~~~~~~~~~~l~~a~~----~~~~~~~~~l~~~--------------------~~~~~~~~ 144 (238)
+ .++++.|++.+ .+++.++..|.||||+|+. .|+.+++++|++. |++++..+
T Consensus 176 ~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~ 255 (327)
T 1sw6_A 176 NNYDSGTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKN 255 (327)
T ss_dssp HHHHTTCHHHHHHHHGGGGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC------------
T ss_pred ccccHHHHHHHHHhhhccccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCccccc
Confidence 8 67788888876 6788899999999999999 8999999999987 88999999
Q ss_pred CCCCcHHHHHHhhCCHHHHHHHHhcCCCCCccccCCCcHHHHHHHhCCHHHHHHHHhcCCCCccCCCCCCchhhcccccc
Q 026440 145 KVGCTALHRGASTGNSALCELLIEEGAEVDATDKAGQTPLMNAVICYNKEVALLLIRHGADVDVEDKEGYTVLGRASNDF 224 (238)
Q Consensus 145 ~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpl~~a~~~~ 224 (238)
..|.||||.|+. +++|+++ +++.++..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+.++
T Consensus 256 ~~g~t~L~~a~~------~~~Ll~~--~~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~g 327 (327)
T 1sw6_A 256 GERKDSILENLD------LKWIIAN--MLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSGLRPVDFGAGLE 327 (327)
T ss_dssp ----CHHHHHCS------HHHHHHH--TTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCCTTCCCTTSCCGGGGTCC--
T ss_pred ccCCChhHHHHH------HHHHHHh--CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHhcC
Confidence 999999999985 8899988 57888999999999999999999999999999999999999999999998764
No 53
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=100.00 E-value=2.2e-36 Score=225.69 Aligned_cols=193 Identities=23% Similarity=0.248 Sum_probs=167.8
Q ss_pred CCCCchHHHHHHHcCCHHHHHHHH----hhcccccccc-cccCCCCcHHHHHH---HcCCHHHHHHHHHcCCC-------
Q 026440 42 NDDDRTLLHVAASCGHPEVVEILL----SVDESANVVN-AVDEEGWAPIHSAA---SIGNVTIVEMLLSKGAD------- 106 (238)
Q Consensus 42 ~~~~~t~L~~A~~~~~~~~~~~Ll----~~~~~~~~~~-~~~~~~~t~l~~a~---~~~~~~~~~~Ll~~~~~------- 106 (238)
+..++++||.|+..|+.+.++.|+ +.+......+ ..+..|.||||+|+ ..|+.+++++|++.|++
T Consensus 2 ~~~~~~~L~~A~~~g~~~~v~~ll~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~ 81 (260)
T 3jxi_A 2 KVFNRPILFDIVSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREF 81 (260)
T ss_dssp CCCCHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHH
T ss_pred ccchHHHHHHHHHhCCHHHHHHHHHHHHhcCCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhh
Confidence 456899999999999999655444 4676633222 22367999999999 77999999999998743
Q ss_pred ----CcccCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCC--------------CCCCcHHHHHHhhCCHHHHHHHHh
Q 026440 107 ----VNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKD--------------KVGCTALHRGASTGNSALCELLIE 168 (238)
Q Consensus 107 ----~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~--------------~~~~t~l~~a~~~~~~~~~~~Ll~ 168 (238)
....+..|.||||+|+..|+.+++++|+++|++++..+ ..|.||||+|+..|+.+++++|++
T Consensus 82 ~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~ 161 (260)
T 3jxi_A 82 INSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTE 161 (260)
T ss_dssp HTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHH
T ss_pred hcccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHh
Confidence 33445589999999999999999999999999999988 579999999999999999999999
Q ss_pred ---cCCCCCccccCCCcHHHHHHHhCC---------HHHHHHHHhcCCCC-------ccCCCCCCchhhccccccchHHH
Q 026440 169 ---EGAEVDATDKAGQTPLMNAVICYN---------KEVALLLIRHGADV-------DVEDKEGYTVLGRASNDFRPILI 229 (238)
Q Consensus 169 ---~~~~~~~~~~~~~t~l~~a~~~~~---------~~~~~~Ll~~~~~~-------~~~~~~g~tpl~~a~~~~~~~~~ 229 (238)
+|++++.++..|+||||+|+..++ .+++++|+++|+++ +.+|..|.||||+|+..++.+++
T Consensus 162 ~~~~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v 241 (260)
T 3jxi_A 162 NGHKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMAAKTGKIGIF 241 (260)
T ss_dssp CSSCCCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHH
T ss_pred ccccCCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccchhhcccCCCCCHHHHHHHcCCHHHH
Confidence 999999999999999999999888 79999999999998 78999999999999999998888
Q ss_pred HHHHH
Q 026440 230 DAAKA 234 (238)
Q Consensus 230 ~~~~~ 234 (238)
++|..
T Consensus 242 ~~Ll~ 246 (260)
T 3jxi_A 242 QHIIR 246 (260)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 77754
No 54
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=100.00 E-value=4.1e-36 Score=225.94 Aligned_cols=187 Identities=26% Similarity=0.291 Sum_probs=96.7
Q ss_pred chHHHHHHHcCCHHHHHHHHhhcccccccccccCCCCcHHHHHHHcCCHHHHHHHHHcCC-CCcccCCCCchHHHHHH--
Q 026440 46 RTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSKGA-DVNLKNDGGRTALHYAA-- 122 (238)
Q Consensus 46 ~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~-~~~~~~~~~~~~l~~a~-- 122 (238)
.+++|.|+..++.+.++.++..+... .++..|..|+||||+|+..|+.+++++|++.|. +++..+..|.|||++|+
T Consensus 77 ~~~l~~a~~~~~~~~~~~l~~~~~~~-~~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~ 155 (276)
T 4hbd_A 77 RSDAHPELVRRHLVTFRAMSARLLDY-VVNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALA 155 (276)
T ss_dssp STTCCHHHHHHHHHHHHHHCHHHHHH-HHTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGC
T ss_pred ccCCCHHHHHHHHHHHHHHHHHHHhh-cCcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHH
Confidence 34445555555555555554432211 133444555555555555555555555555554 45555555555555555
Q ss_pred ---HcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHhhCCHHHHHHHHhcCCCCCccccCCCcHHHHHHHhCCHHHHHHH
Q 026440 123 ---SKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELLIEEGAEVDATDKAGQTPLMNAVICYNKEVALLL 199 (238)
Q Consensus 123 ---~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L 199 (238)
..++.+++++|++.|...+..+..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|
T Consensus 156 ~~~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~n~~d~~G~TpLh~A~~~g~~~iv~~L 235 (276)
T 4hbd_A 156 TLKTQDDIETVLQLFRLGNINAKASQAGQTALMLAVSHGRVDVVKALLACEADVNVQDDDGSTALMCACEHGHKEIAGLL 235 (276)
T ss_dssp CCCSHHHHHHHHHHHHHSCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred HhhhhhhHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHH
Confidence 33445555555555555554555555555555555555555555555555555555555555555555555555555
Q ss_pred Hh-cCCCCccCCCCCCchhhccccccchHHHHHHH
Q 026440 200 IR-HGADVDVEDKEGYTVLGRASNDFRPILIDAAK 233 (238)
Q Consensus 200 l~-~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~~~ 233 (238)
++ .|++++.+|..|.||+++|+..++.+++++|.
T Consensus 236 l~~~gad~~~~d~~g~TpL~~A~~~g~~~iv~~Ll 270 (276)
T 4hbd_A 236 LAVPSCDISLTDRDGSTALMVALDAGQSEIASMLY 270 (276)
T ss_dssp HTSTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHH
T ss_pred HhcCCCCCcCcCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 55 45555555555555555555555555544443
No 55
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=100.00 E-value=2.6e-35 Score=210.28 Aligned_cols=164 Identities=29% Similarity=0.367 Sum_probs=117.5
Q ss_pred hcCCCCCCCchHHHHHHHcCCHHHHHHHHhhcccccccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCch
Q 026440 37 SLSLRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRT 116 (238)
Q Consensus 37 ~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~ 116 (238)
..+.++..|.||||+|+..|+.+++++|++.+.+ ++..+..|.||||+|+..++.+++++|++.|++++..+..|.|
T Consensus 27 ~~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~---~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t 103 (192)
T 2rfm_A 27 LRNYRDSYNRTPLMVACMLGMENAIDKLVENFDK---LEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKT 103 (192)
T ss_dssp HHTCCCTTCCCHHHHHHHHTCGGGHHHHHHHHCC---TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCC
T ss_pred HHhCcCCCCCCHHHHHHHcCCHHHHHHHHHhccc---cccccccCccHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCc
Confidence 3556677777777777777777777777776655 4555666777777777777777777777777777777777777
Q ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHhhCCHHHHHHHHhcCCCCCccccCCCcHHHHHHHhCCHHHH
Q 026440 117 ALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELLIEEGAEVDATDKAGQTPLMNAVICYNKEVA 196 (238)
Q Consensus 117 ~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~ 196 (238)
|||+|+..|+.+++++|+++|++++..+..|.||||+|+..++.+++++|+++|++++.++..|.||+++|+..++.+++
T Consensus 104 ~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~v 183 (192)
T 2rfm_A 104 PLMWSIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLLELGADISARDLTGLTAEASARIFGRQEVI 183 (192)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCcHHHH
Confidence 77777777777777777777777777777777777777777777777777777777777777777777777777777777
Q ss_pred HHHHhcC
Q 026440 197 LLLIRHG 203 (238)
Q Consensus 197 ~~Ll~~~ 203 (238)
++|+++|
T Consensus 184 ~~Ll~~~ 190 (192)
T 2rfm_A 184 KIFTEVR 190 (192)
T ss_dssp HHHHHHH
T ss_pred HHHHhcc
Confidence 7776653
No 56
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=100.00 E-value=2e-35 Score=207.22 Aligned_cols=170 Identities=26% Similarity=0.340 Sum_probs=151.1
Q ss_pred CchHHHHHHHcCCHHHHHHHHhhcccccccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCchHHHHHHHc
Q 026440 45 DRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASK 124 (238)
Q Consensus 45 ~~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~l~~a~~~ 124 (238)
+.+|||.|+..|+.+++++|+..+.. .++..+..|.||||+|+..++.+++++|++.|++++..+..|.||||+|+..
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~--~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 79 (172)
T 3v30_A 2 DSLSIHQLAAQGELDQLKEHLRKGDN--LVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTG 79 (172)
T ss_dssp --CCHHHHHHTTCHHHHHHHHTTCSG--GGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHT
T ss_pred chhhHHHHHHcCCHHHHHHHHHcCcc--cccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCchhhcccCCCHHHHHHHC
Confidence 46899999999999999999986543 3567788999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHhhCCHHHHHHHHhcCCCCCccccCCCcHHHHHHHhCCHHHHHHHHhcCC
Q 026440 125 GWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELLIEEGAEVDATDKAGQTPLMNAVICYNKEVALLLIRHGA 204 (238)
Q Consensus 125 ~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~ 204 (238)
|+.+++++|+++|++++..+..|.||||+|+..++.+++++|+++|++++.++..|.||||+|+..++.+++++|+++|+
T Consensus 80 ~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~ 159 (172)
T 3v30_A 80 GYTDIVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYTPMDLAVALGYRKVQQVIENHIL 159 (172)
T ss_dssp TCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHhCcHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccCCCCCCch
Q 026440 205 DVDVEDKEGYTV 216 (238)
Q Consensus 205 ~~~~~~~~g~tp 216 (238)
++...+..|.||
T Consensus 160 ~~~~~~~~~~~p 171 (172)
T 3v30_A 160 KLFQSNLVPADP 171 (172)
T ss_dssp HHSCC-------
T ss_pred HHhcccCCCCCC
Confidence 999988888887
No 57
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=100.00 E-value=5.2e-35 Score=208.68 Aligned_cols=162 Identities=29% Similarity=0.346 Sum_probs=156.3
Q ss_pred cccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHH
Q 026440 74 VNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHR 153 (238)
Q Consensus 74 ~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~ 153 (238)
.+.++..|+||||+|+..|+.+++++|++.|.+++..+..|.||||+|+..|+.+++++|++.|++++..+..|.||||+
T Consensus 28 ~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~ 107 (192)
T 2rfm_A 28 RNYRDSYNRTPLMVACMLGMENAIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKTPLMW 107 (192)
T ss_dssp HTCCCTTCCCHHHHHHHHTCGGGHHHHHHHHCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHH
T ss_pred HhCcCCCCCCHHHHHHHcCCHHHHHHHHHhccccccccccCccHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHH
Confidence 56678899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhCCHHHHHHHHhcCCCCCccccCCCcHHHHHHHhCCHHHHHHHHhcCCCCccCCCCCCchhhccccccchHHHHHHH
Q 026440 154 GASTGNSALCELLIEEGAEVDATDKAGQTPLMNAVICYNKEVALLLIRHGADVDVEDKEGYTVLGRASNDFRPILIDAAK 233 (238)
Q Consensus 154 a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~~~ 233 (238)
|+..++.+++++|+++|++++.++..|.||||+|+..++.+++++|+++|++++.+|..|.||+++|+..++.+++++|.
T Consensus 108 A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll 187 (192)
T 2rfm_A 108 SIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLLELGADISARDLTGLTAEASARIFGRQEVIKIFT 187 (192)
T ss_dssp HHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCcHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998887
Q ss_pred HH
Q 026440 234 AM 235 (238)
Q Consensus 234 ~~ 235 (238)
..
T Consensus 188 ~~ 189 (192)
T 2rfm_A 188 EV 189 (192)
T ss_dssp HH
T ss_pred hc
Confidence 64
No 58
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=100.00 E-value=1.1e-35 Score=223.59 Aligned_cols=190 Identities=26% Similarity=0.360 Sum_probs=178.7
Q ss_pred ChHHHHHHHcCChHHHHHHHHHHhhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhhcc-cccccccccCCCCcHHHHHH
Q 026440 11 DKDLFKAAETGDSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAASCGHPEVVEILLSVDE-SANVVNAVDEEGWAPIHSAA 89 (238)
Q Consensus 11 ~~~l~~a~~~g~~~~v~~l~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~~~-~~~~~~~~~~~~~t~l~~a~ 89 (238)
...++.|+..|+.+.++.+++......++..|..|.||||+|+..|+.+++++|++.+. . ++..+..|.|||++|+
T Consensus 77 ~~~l~~a~~~~~~~~~~~l~~~~~~~~~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~---~~~~~~~g~tpL~~a~ 153 (276)
T 4hbd_A 77 RSDAHPELVRRHLVTFRAMSARLLDYVVNIADSNGNTALHYSVSHANFPVVQQLLDSGVCK---VDKQNRAGYSPIMLTA 153 (276)
T ss_dssp STTCCHHHHHHHHHHHHHHCHHHHHHHHTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCC---TTCCCTTSCCHHHHGG
T ss_pred ccCCCHHHHHHHHHHHHHHHHHHHhhcCcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCc---CCCCCCCCCCHHHHHH
Confidence 44678899999999999999998777799999999999999999999999999999876 4 6778899999999999
Q ss_pred -----HcCCHHHHHHHHHcCCCCcccCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHhhCCHHHHH
Q 026440 90 -----SIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCE 164 (238)
Q Consensus 90 -----~~~~~~~~~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~ 164 (238)
..++.+++++|++.|...+..+..|.||||+|+..|+.+++++|++.|++++..|..|.||||+|+..|+.++++
T Consensus 154 ~~~~~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~n~~d~~G~TpLh~A~~~g~~~iv~ 233 (276)
T 4hbd_A 154 LATLKTQDDIETVLQLFRLGNINAKASQAGQTALMLAVSHGRVDVVKALLACEADVNVQDDDGSTALMCACEHGHKEIAG 233 (276)
T ss_dssp GCCCCSHHHHHHHHHHHHHSCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHH
T ss_pred HHHhhhhhhHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHH
Confidence 668899999999999999888889999999999999999999999999999999999999999999999999999
Q ss_pred HHHh-cCCCCCccccCCCcHHHHHHHhCCHHHHHHHHhcC
Q 026440 165 LLIE-EGAEVDATDKAGQTPLMNAVICYNKEVALLLIRHG 203 (238)
Q Consensus 165 ~Ll~-~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~ 203 (238)
+|++ .|++++.++..|.||||+|+..|+.+++++|++++
T Consensus 234 ~Ll~~~gad~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~~ 273 (276)
T 4hbd_A 234 LLLAVPSCDISLTDRDGSTALMVALDAGQSEIASMLYSRM 273 (276)
T ss_dssp HHHTSTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHC
T ss_pred HHHhcCCCCCcCcCCCCCCHHHHHHHcCCHHHHHHHHhcc
Confidence 9999 89999999999999999999999999999999874
No 59
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=100.00 E-value=2e-34 Score=200.13 Aligned_cols=159 Identities=30% Similarity=0.367 Sum_probs=144.9
Q ss_pred CCCchHHHHHHHcCCHHHHHHHHhhcccccccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCchHHHHHH
Q 026440 43 DDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAA 122 (238)
Q Consensus 43 ~~~~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~l~~a~ 122 (238)
+...+|||.|+..|+.+++++|++.+.+ ++..+..|+||||+|+. ++.+++++|++.|++++.++..|.||||+|+
T Consensus 3 ~~~~~~L~~A~~~g~~~~v~~Ll~~~~~---~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~ 78 (162)
T 1ihb_A 3 EPWGNELASAAARGDLEQLTSLLQNNVN---VNAQNGFGRTALQVMKL-GNPEIARRLLLRGANPDLKDRTGFAVIHDAA 78 (162)
T ss_dssp --CHHHHHHHHHHTCHHHHHHHTTSCCC---TTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred chHhhHHHHHHHcCCHHHHHHHHhCCCC---ccccCccCccHHHHHHc-CcHHHHHHHHHcCCCCCCCCCCCCCHHHHHH
Confidence 3467899999999999999999987766 66778899999999999 9999999999999999999999999999999
Q ss_pred HcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHhhCCHHHHHHHHhcCCC-CCccccCCCcHHHHHHHhCCHHHHHHHHh
Q 026440 123 SKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELLIEEGAE-VDATDKAGQTPLMNAVICYNKEVALLLIR 201 (238)
Q Consensus 123 ~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~-~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~ 201 (238)
..|+.+++++|+++|++++..+..|.||||+|+..++.+++++|+++|++ ++..+..|.||||+|+..++.+++++|++
T Consensus 79 ~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~ 158 (162)
T 1ihb_A 79 RAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQA 158 (162)
T ss_dssp HHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred HcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999988 58899999999999999999999999999
Q ss_pred cCCC
Q 026440 202 HGAD 205 (238)
Q Consensus 202 ~~~~ 205 (238)
+|++
T Consensus 159 ~GAd 162 (162)
T 1ihb_A 159 NGAG 162 (162)
T ss_dssp TC--
T ss_pred hCCC
Confidence 9985
No 60
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=100.00 E-value=2.6e-34 Score=200.58 Aligned_cols=159 Identities=28% Similarity=0.404 Sum_probs=128.0
Q ss_pred CCchHHHHHHHcCCHHHHHHHHhhcccccccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCchHHHHHHH
Q 026440 44 DDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAAS 123 (238)
Q Consensus 44 ~~~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~l~~a~~ 123 (238)
.|.||||.|+..|+.+++++|++.+.. ++..+..|.||||+|+..++.+++++|++.|++++..+..|.||||+|+.
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~~~~---~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~ 78 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQENV---INHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACS 78 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHHSSC---TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHH
T ss_pred CCcchHHHHHHCCCHHHHHHHHHcCCC---cCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHH
Confidence 467788888888888888888877655 56667778888888888888888888888888888777788888888888
Q ss_pred cCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHhhCCHHHHHHHHhcCCCCCccccCCCcHHHHHHHhCCHHHHHHHHhcC
Q 026440 124 KGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELLIEEGAEVDATDKAGQTPLMNAVICYNKEVALLLIRHG 203 (238)
Q Consensus 124 ~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~ 203 (238)
.|+.+++++|++.|++++..+..|.||||+|+..++.+++++|+++|++++.++..|.||+++|+..++.+++++|++++
T Consensus 79 ~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~ 158 (167)
T 3v31_A 79 KGYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYNSMDLAVALGYRSVQQVIESHL 158 (167)
T ss_dssp HTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHHH
Confidence 88888888888888888888888888888888888888888888888888888888888888888888888888888765
Q ss_pred CC
Q 026440 204 AD 205 (238)
Q Consensus 204 ~~ 205 (238)
++
T Consensus 159 ~~ 160 (167)
T 3v31_A 159 LK 160 (167)
T ss_dssp HH
T ss_pred HH
Confidence 44
No 61
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=100.00 E-value=7.2e-34 Score=198.73 Aligned_cols=158 Identities=40% Similarity=0.564 Sum_probs=102.0
Q ss_pred CCCchHHHHHHHcCCHHHHHHHHhhcccccccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCchHHHHHH
Q 026440 43 DDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAA 122 (238)
Q Consensus 43 ~~~~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~l~~a~ 122 (238)
..+.++|+.|+..|+.+++++|++.+.+ ++..+..|.||||+|+..++.+++++|+++|++++..+..|.||||+|+
T Consensus 12 ~~~~~~l~~A~~~g~~~~v~~Ll~~g~~---~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~ 88 (169)
T 2y1l_E 12 SDLGKKLLEAARAGRDDEVRILMANGAD---VNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAGMTPLRLAA 88 (169)
T ss_dssp -CHHHHHHHHHHHTCHHHHHHHHHTTCC---TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred CcccchHHHHHHcCCHHHHHHHHHCCCC---CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHH
Confidence 3455666666666666666666665554 4445566666666666666666666666666666666666666666666
Q ss_pred HcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHhhCCHHHHHHHHhcCCCCCccccCCCcHHHHHHHhCCHHHHHHHHhc
Q 026440 123 SKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELLIEEGAEVDATDKAGQTPLMNAVICYNKEVALLLIRH 202 (238)
Q Consensus 123 ~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~ 202 (238)
..|+.+++++|+++|++++..+..|.||||+|+..++.+++++|+++|++++.++..|.||+++|+..++.+++++|+++
T Consensus 89 ~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~ 168 (169)
T 2y1l_E 89 LFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVNAQDKFGKTAFDISIDNGNEDLAEILQKL 168 (169)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC
T ss_pred HcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHc
Confidence 66666666666666666666666666666666666666666666666666666666666666666666666666666655
Q ss_pred C
Q 026440 203 G 203 (238)
Q Consensus 203 ~ 203 (238)
|
T Consensus 169 G 169 (169)
T 2y1l_E 169 N 169 (169)
T ss_dssp -
T ss_pred C
Confidence 4
No 62
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=100.00 E-value=4.9e-34 Score=199.19 Aligned_cols=156 Identities=24% Similarity=0.346 Sum_probs=151.3
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHhhCC
Q 026440 80 EGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGN 159 (238)
Q Consensus 80 ~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~ 159 (238)
.|.||||.|+..|+.+++++|++.+.+++..+..|.||||+|+..|+.+++++|++.|++++..+..|.||||.|+..++
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 81 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGY 81 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTC
T ss_pred CCcchHHHHHHCCCHHHHHHHHHcCCCcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCC
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCCccccCCCcHHHHHHHhCCHHHHHHHHhcCCCCccCCCCCCchhhccccccchHHHHHHHHH
Q 026440 160 SALCELLIEEGAEVDATDKAGQTPLMNAVICYNKEVALLLIRHGADVDVEDKEGYTVLGRASNDFRPILIDAAKAM 235 (238)
Q Consensus 160 ~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~~~~~ 235 (238)
.+++++|+++|++++..+..|.||||+|+..++.+++++|+++|++++.+|..|.||+++|+..++.++++++..-
T Consensus 82 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~ 157 (167)
T 3v31_A 82 TDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYNSMDLAVALGYRSVQQVIESH 157 (167)
T ss_dssp HHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999888763
No 63
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=100.00 E-value=5.6e-34 Score=199.28 Aligned_cols=158 Identities=34% Similarity=0.485 Sum_probs=150.1
Q ss_pred ccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHh
Q 026440 77 VDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGAS 156 (238)
Q Consensus 77 ~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~ 156 (238)
....+.++|+.|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|+++|++++..+..|.||||.|+.
T Consensus 10 ~~~~~~~~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~ 89 (169)
T 2y1l_E 10 HGSDLGKKLLEAARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAGMTPLRLAAL 89 (169)
T ss_dssp ---CHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred CCCcccchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHH
Confidence 34567889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCCHHHHHHHHhcCCCCCccccCCCcHHHHHHHhCCHHHHHHHHhcCCCCccCCCCCCchhhccccccchHHHHHHHH
Q 026440 157 TGNSALCELLIEEGAEVDATDKAGQTPLMNAVICYNKEVALLLIRHGADVDVEDKEGYTVLGRASNDFRPILIDAAKA 234 (238)
Q Consensus 157 ~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~~~~ 234 (238)
.++.+++++|+++|++++..+..|.||||+|+..++.+++++|+++|++++.+|..|.||+++|+..++.+++++|.+
T Consensus 90 ~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~ 167 (169)
T 2y1l_E 90 FGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 167 (169)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHT
T ss_pred cCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999888887764
No 64
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=100.00 E-value=1.1e-33 Score=194.57 Aligned_cols=149 Identities=31% Similarity=0.386 Sum_probs=82.0
Q ss_pred cHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHhhCCHHH
Q 026440 83 APIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSAL 162 (238)
Q Consensus 83 t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~ 162 (238)
++|+.|+..|+.+++++|++.|.+++ .+..|.||||+|+..|+.+++++|++.|++++..+..|.||||+|+..++.++
T Consensus 4 ~~L~~A~~~g~~~~v~~Ll~~g~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~ 82 (153)
T 1awc_B 4 KKLLEAARAGQDDEVRILMANGAPFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGHANI 82 (153)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHTCCCC-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHcCCCCC-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcChHHH
Confidence 34555555555555555555544443 23445555555555555555555555555555555555555555555555555
Q ss_pred HHHHHhcCCCCCccccCCCcHHHHHHHhCCHHHHHHHHhcCCCCccCCCCCCchhhccccccchHHHHHH
Q 026440 163 CELLIEEGAEVDATDKAGQTPLMNAVICYNKEVALLLIRHGADVDVEDKEGYTVLGRASNDFRPILIDAA 232 (238)
Q Consensus 163 ~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~~ 232 (238)
+++|+++|++++.++..|.||||+|+..++.+++++|+++|++++.+|..|.||+++|+..++.+++++|
T Consensus 83 v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L 152 (153)
T 1awc_B 83 VEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEIL 152 (153)
T ss_dssp HHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHh
Confidence 5555555555555555555555555555555555555555555555555555555555555555555554
No 65
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=100.00 E-value=5.3e-34 Score=199.95 Aligned_cols=169 Identities=21% Similarity=0.293 Sum_probs=152.8
Q ss_pred ChHHHHHHHcCChHHHHHHHHHHhhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhhcccccccccccCCCCcHHHHHHH
Q 026440 11 DKDLFKAAETGDSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAAS 90 (238)
Q Consensus 11 ~~~l~~a~~~g~~~~v~~l~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~t~l~~a~~ 90 (238)
..+|+.|+..|+.+.+++|++.+ ...++..+..|.||||+|+..|+.+++++|++.+.+ ++..+..|.||||+|+.
T Consensus 3 ~~~L~~A~~~g~~~~v~~ll~~~-~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~---~~~~~~~g~t~L~~A~~ 78 (172)
T 3v30_A 3 SLSIHQLAAQGELDQLKEHLRKG-DNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGAD---PHILAKERESALSLAST 78 (172)
T ss_dssp -CCHHHHHHTTCHHHHHHHHTTC-SGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC---TTCCCTTCCCHHHHHHH
T ss_pred hhhHHHHHHcCCHHHHHHHHHcC-cccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC---chhhcccCCCHHHHHHH
Confidence 45799999999999999999987 455788899999999999999999999999998877 66778899999999999
Q ss_pred cCCHHHHHHHHHcCCCCcccCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHhhCCHHHHHHHHhcC
Q 026440 91 IGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELLIEEG 170 (238)
Q Consensus 91 ~~~~~~~~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~ 170 (238)
.++.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|++++..+..|.||+++|+..++.+++++|++++
T Consensus 79 ~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~ 158 (172)
T 3v30_A 79 GGYTDIVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYTPMDLAVALGYRKVQQVIENHI 158 (172)
T ss_dssp TTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHhCcHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccCCCcH
Q 026440 171 AEVDATDKAGQTP 183 (238)
Q Consensus 171 ~~~~~~~~~~~t~ 183 (238)
+++...+..+.||
T Consensus 159 ~~~~~~~~~~~~p 171 (172)
T 3v30_A 159 LKLFQSNLVPADP 171 (172)
T ss_dssp HHHSCC-------
T ss_pred HHHhcccCCCCCC
Confidence 9988888777776
No 66
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=100.00 E-value=1e-33 Score=199.72 Aligned_cols=169 Identities=28% Similarity=0.379 Sum_probs=152.7
Q ss_pred CCCchHHHHHHHcCCHHHHHHHHhhcccccccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCchHHHHHH
Q 026440 43 DDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAA 122 (238)
Q Consensus 43 ~~~~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~l~~a~ 122 (238)
.++.++|+.||..|+.+++++|++.+ +..++..+..|+||||+|+..++.+++++|++.|++++..+..|.||||+|+
T Consensus 3 ~~~~~~l~~A~~~g~~~~v~~ll~~~--~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~ 80 (179)
T 3f6q_A 3 PEFMDDIFTQCREGNAVAVRLWLDNT--ENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAA 80 (179)
T ss_dssp ----CCHHHHHHHTCHHHHHHHHHCT--TSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHhcC--cccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCCHHHHHH
Confidence 45788999999999999999999853 2236777889999999999999999999999999999999999999999999
Q ss_pred HcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHhhCCHHHHHHHHhcCCCCCccccCCCcHHHHHHHhCCHHHHHHHHhc
Q 026440 123 SKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELLIEEGAEVDATDKAGQTPLMNAVICYNKEVALLLIRH 202 (238)
Q Consensus 123 ~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~ 202 (238)
..|+.+++++|+++|++++..+..|.||||+|+..++.+++++|+++|++++.++..|.||+++|+..++.+++++|+++
T Consensus 81 ~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~L~~~ 160 (179)
T 3f6q_A 81 SHGHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSICNKYGEMPVDKAKAPLRELLRERAEKM 160 (179)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSSBCCTTSCCGGGGSCHHHHHHHHHHHHHT
T ss_pred HcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcchhccCCCCcHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccCCCCC
Q 026440 203 GADVDVEDKEG 213 (238)
Q Consensus 203 ~~~~~~~~~~g 213 (238)
|++++..+..+
T Consensus 161 g~~~~~~~~~~ 171 (179)
T 3f6q_A 161 GQNLNRIPYKD 171 (179)
T ss_dssp TCCCSCBCCCC
T ss_pred hcCcccCCccc
Confidence 99998876544
No 67
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=100.00 E-value=8.4e-37 Score=223.45 Aligned_cols=199 Identities=24% Similarity=0.204 Sum_probs=168.7
Q ss_pred HHHHHHHHhhh-hcCCCCCCCchHHHHHHHcCCHHHHHHHHhhcccccccccccCCCCcHHHHHHHcCCHHHHHHHHHcC
Q 026440 26 FKSLSKQQLLK-SLSLRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSKG 104 (238)
Q Consensus 26 v~~l~~~~~~~-~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~ 104 (238)
++.|++++... .....+..+.||||.|+..|+.+++++|++.+.+ ++..+..|+||||+|+..|+.+++++|++.|
T Consensus 1 v~~ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~---~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g 77 (229)
T 2vge_A 1 MRSVLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMND---PSQPNEEGITALHNAICGANYSIVDFLITAG 77 (229)
T ss_dssp ---------CCCCCCCTTSCHHHHHHHHHHHTCHHHHHHHHHHSSC---TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred CeehhccCCCCccccccccchhHHHHHHHHcCCHHHHHHHHhcCCC---CCCCCCCCCCHHHHHHHcCCHHHHHHHHHCC
Confidence 35666666321 2234456678999999999999999999998877 6678889999999999999999999999999
Q ss_pred CCCcccCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCC-CCCCcHHHHH--HhhCCHHHHHHHHhcCCCCCccccCCC
Q 026440 105 ADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKD-KVGCTALHRG--ASTGNSALCELLIEEGAEVDATDKAGQ 181 (238)
Q Consensus 105 ~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~-~~~~t~l~~a--~~~~~~~~~~~Ll~~~~~~~~~~~~~~ 181 (238)
++++.++..|.||||+|+..|+.+++++|++.|++++..+ ..|.|||++| +..++.+++++|++.|++++..+..|.
T Consensus 78 a~~n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~~~~~~~~~~ 157 (229)
T 2vge_A 78 ANVNSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATTLSDGATAFEKCDPYREGYADCATYLADVEQSMGLMNSGAV 157 (229)
T ss_dssp CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHHTTTSGGGEE
T ss_pred CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCCcccccCCch
Confidence 9999999999999999999999999999999999999986 5899999999 999999999999999999999999999
Q ss_pred cHHHHHHHhCCHHHHHHHHhcCCC--CccCCCCCCchhhccccccchHHHH
Q 026440 182 TPLMNAVICYNKEVALLLIRHGAD--VDVEDKEGYTVLGRASNDFRPILID 230 (238)
Q Consensus 182 t~l~~a~~~~~~~~~~~Ll~~~~~--~~~~~~~g~tpl~~a~~~~~~~~~~ 230 (238)
||++.++... ..++|++.|++ ++.+|..|+|||++|+..++.++++
T Consensus 158 ~~l~~~~~~~---~~~~ll~~ga~~~~~~~d~~G~TpL~~A~~~g~~~~v~ 205 (229)
T 2vge_A 158 YALWDYSAEF---GDELSFREGESVTVLRRDGPEETDWWWAALHGQEGYVP 205 (229)
T ss_dssp EESSCBCCSS---TTBCCBCTTCEEEEEESSCTTCSSEEEEEETTEEEEEE
T ss_pred HHHHHHhhcc---ccccCccccccccccccCCCcccHHHHHHHcCCcceee
Confidence 9999654443 33677888988 6788999999999999999977654
No 68
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=100.00 E-value=1.2e-32 Score=189.42 Aligned_cols=151 Identities=34% Similarity=0.443 Sum_probs=137.0
Q ss_pred CchHHHHHHHcCCHHHHHHHHhhcccccccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCchHHHHHHHc
Q 026440 45 DRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASK 124 (238)
Q Consensus 45 ~~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~l~~a~~~ 124 (238)
..++|+.|+..|+.+++++|++.+... + .+..|.||||+|+..|+.+++++|++.|++++..+..|.||||+|+..
T Consensus 2 ~~~~L~~A~~~g~~~~v~~Ll~~g~~~---~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 77 (153)
T 1awc_B 2 LGKKLLEAARAGQDDEVRILMANGAPF---T-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASE 77 (153)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHTCCC---C-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHH
T ss_pred ccHHHHHHHHcCCHHHHHHHHHcCCCC---C-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHc
Confidence 457899999999999999999887653 2 467899999999999999999999999999998888999999999999
Q ss_pred CCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHhhCCHHHHHHHHhcCCCCCccccCCCcHHHHHHHhCCHHHHHHH
Q 026440 125 GWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELLIEEGAEVDATDKAGQTPLMNAVICYNKEVALLL 199 (238)
Q Consensus 125 ~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L 199 (238)
|+.+++++|+++|++++..+..|.||||+|+..++.+++++|+++|++++.++..|.||+++|+..++.+++++|
T Consensus 78 ~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L 152 (153)
T 1awc_B 78 GHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEIL 152 (153)
T ss_dssp TCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred ChHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHh
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999887
No 69
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=100.00 E-value=2.1e-33 Score=195.63 Aligned_cols=159 Identities=33% Similarity=0.489 Sum_probs=75.1
Q ss_pred CCCCchHHHHHHHcCCHHHHHHHHhhcccccccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCchHHHHH
Q 026440 42 NDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYA 121 (238)
Q Consensus 42 ~~~~~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~l~~a 121 (238)
+..+.++||.|+..|+.+++++|++.+. ...+..+..|.||||+|+..++.+++++|++.|++++.++..|.||||+|
T Consensus 5 ~~~~~~~l~~A~~~g~~~~v~~ll~~~~--~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A 82 (165)
T 3twr_A 5 NSEADRQLLEAAKAGDVETVKKLCTVQS--VNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNA 82 (165)
T ss_dssp -CHHHHHHHHHHHHTCHHHHHHHCCTTT--TTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred cchhhHHHHHHHHhCCHHHHHHHHHcCC--CCccccccCCCCHHHHHHHcChHHHHHHHHhcCCCCCccCCCCCCHHHHH
Confidence 3445555566666565555555554221 11333344445555555555555555555555555544444444444444
Q ss_pred HHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHhhCCHHHHHHHHhcCCCCCccccCCCcHHHHHHHhCCHHHHHHHHh
Q 026440 122 ASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELLIEEGAEVDATDKAGQTPLMNAVICYNKEVALLLIR 201 (238)
Q Consensus 122 ~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~ 201 (238)
+..|+.+++++|+++|++++..+..|.||||+|+..++.+++++|+++|++++.++..|.||+++|+. ++.+++++|++
T Consensus 83 ~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~-~~~~i~~~L~~ 161 (165)
T 3twr_A 83 CSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPLDLVKD-GDTDIQDLLRG 161 (165)
T ss_dssp HHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTGGGSCT-TCHHHHHHHHT
T ss_pred HHcCcHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCChhHhHhc-CChHHHHHHhh
Confidence 44444444444444444444444444444444444444444444444444444444444444444333 44444444444
Q ss_pred cC
Q 026440 202 HG 203 (238)
Q Consensus 202 ~~ 203 (238)
+|
T Consensus 162 ~g 163 (165)
T 3twr_A 162 DA 163 (165)
T ss_dssp C-
T ss_pred cc
Confidence 33
No 70
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=100.00 E-value=6.7e-33 Score=193.04 Aligned_cols=155 Identities=30% Similarity=0.404 Sum_probs=145.2
Q ss_pred cCCCCcHHHHHHHcCCHHHHHHHHHc-CCCCcccCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHh
Q 026440 78 DEEGWAPIHSAASIGNVTIVEMLLSK-GADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGAS 156 (238)
Q Consensus 78 ~~~~~t~l~~a~~~~~~~~~~~Ll~~-~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~ 156 (238)
+..+.+||+.|+..|+.+++++|++. +.+.+..+..|.||||+|+..|+.+++++|++.|++++..+..|.||||+|+.
T Consensus 5 ~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~ 84 (165)
T 3twr_A 5 NSEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACS 84 (165)
T ss_dssp -CHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred cchhhHHHHHHHHhCCHHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCCCCccCCCCCCHHHHHHH
Confidence 56788999999999999999999984 55666777889999999999999999999999999999999999999999999
Q ss_pred hCCHHHHHHHHhcCCCCCccccCCCcHHHHHHHhCCHHHHHHHHhcCCCCccCCCCCCchhhccccccchHHHHHHH
Q 026440 157 TGNSALCELLIEEGAEVDATDKAGQTPLMNAVICYNKEVALLLIRHGADVDVEDKEGYTVLGRASNDFRPILIDAAK 233 (238)
Q Consensus 157 ~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~~~ 233 (238)
.++.+++++|+++|++++.++..|.||||+|+..++.+++++|+++|++++.+|..|.||+++|.. ++.+++++|.
T Consensus 85 ~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~-~~~~i~~~L~ 160 (165)
T 3twr_A 85 YGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPLDLVKD-GDTDIQDLLR 160 (165)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTGGGSCT-TCHHHHHHHH
T ss_pred cCcHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCChhHhHhc-CChHHHHHHh
Confidence 999999999999999999999999999999999999999999999999999999999999999887 7878877765
No 71
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=100.00 E-value=4.6e-33 Score=193.26 Aligned_cols=154 Identities=29% Similarity=0.319 Sum_probs=146.8
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHhhCC
Q 026440 80 EGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGN 159 (238)
Q Consensus 80 ~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~ 159 (238)
...+||+.|+..|+.+++++|++.|++++..+..|.||||+|+. |+.+++++|++.|++++..+..|.||||.|+..++
T Consensus 4 ~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 82 (162)
T 1ihb_A 4 PWGNELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKL-GNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGF 82 (162)
T ss_dssp -CHHHHHHHHHHTCHHHHHHHTTSCCCTTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTC
T ss_pred hHhhHHHHHHHcCCHHHHHHHHhCCCCccccCccCccHHHHHHc-CcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCC
Confidence 45689999999999999999999999999999999999999999 99999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCCccccCCCcHHHHHHHhCCHHHHHHHHhcCCC-CccCCCCCCchhhccccccchHHHHHHHH
Q 026440 160 SALCELLIEEGAEVDATDKAGQTPLMNAVICYNKEVALLLIRHGAD-VDVEDKEGYTVLGRASNDFRPILIDAAKA 234 (238)
Q Consensus 160 ~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~-~~~~~~~g~tpl~~a~~~~~~~~~~~~~~ 234 (238)
.+++++|+++|++++.++..|.||||+|+..++.+++++|+++|++ ++..|..|.||+++|+..++.+++++|..
T Consensus 83 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~ 158 (162)
T 1ihb_A 83 LDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQA 158 (162)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999998 59999999999999999999888887753
No 72
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=100.00 E-value=2.7e-32 Score=192.49 Aligned_cols=156 Identities=31% Similarity=0.432 Sum_probs=146.7
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHHc-CCCCcccCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHhh
Q 026440 79 EEGWAPIHSAASIGNVTIVEMLLSK-GADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGAST 157 (238)
Q Consensus 79 ~~~~t~l~~a~~~~~~~~~~~Ll~~-~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~ 157 (238)
..+.++|+.|+..|+.+++++|++. +.+++..+..|.||||+|+..|+.+++++|++.|++++..+..|.||||+|+..
T Consensus 3 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 82 (179)
T 3f6q_A 3 PEFMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASH 82 (179)
T ss_dssp ----CCHHHHHHHTCHHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHc
Confidence 3578899999999999999999998 667888899999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHhcCCCCCccccCCCcHHHHHHHhCCHHHHHHHHhcCCCCccCCCCCCchhhccccccchHHHHHHHH
Q 026440 158 GNSALCELLIEEGAEVDATDKAGQTPLMNAVICYNKEVALLLIRHGADVDVEDKEGYTVLGRASNDFRPILIDAAKA 234 (238)
Q Consensus 158 ~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~~~~ 234 (238)
++.+++++|+++|++++..+..|.||||+|+..++.+++++|+++|++++.+|..|.||+++|...++.++++++..
T Consensus 83 ~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~L~~ 159 (179)
T 3f6q_A 83 GHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSICNKYGEMPVDKAKAPLRELLRERAEK 159 (179)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSSBCCTTSCCGGGGSCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcchhccCCCCcHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999888888765
No 73
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=100.00 E-value=4.4e-32 Score=187.14 Aligned_cols=154 Identities=27% Similarity=0.401 Sum_probs=112.3
Q ss_pred CchHHHHHHHcCCHHHHHHHHhhcccccccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCchHHHHHHHc
Q 026440 45 DRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASK 124 (238)
Q Consensus 45 ~~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~l~~a~~~ 124 (238)
+.||||.|+..|+.+++++|++. . +...+..+..|.||||+ +..|+.+++++|++.|++++.++..|.||||+|+..
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~-~-~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 78 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQEVRRLLHR-E-LVHPDALNRFGKTALQV-MMFGSTAIALELLKQGASPNVQDTSGTSPVHDAART 78 (156)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHT-T-CCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT
T ss_pred cchHHHHHHHhCCHHHHHHHHHh-h-CcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHc
Confidence 45677777777777777777765 2 12255566677777777 777777777777777777777777777777777777
Q ss_pred CCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHhhCCHHHHHHHHhcCCCCCccccCCCcHHHHHHHhCCHHHHHHHHhc
Q 026440 125 GWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELLIEEGAEVDATDKAGQTPLMNAVICYNKEVALLLIRH 202 (238)
Q Consensus 125 ~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~ 202 (238)
|+.+++++|+++|++++..+..|.||||+|+..++.+++++|++. ++++.++..|.||||+|+..++.+++++|+++
T Consensus 79 ~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ 155 (156)
T 1bd8_A 79 GFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE-SDLHRRDARGLTPLELALQRGAQDLVDILQGH 155 (156)
T ss_dssp TCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT-SCTTCCCTTSCCHHHHHHHSCCHHHHHHHHTT
T ss_pred CcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHhChHHHHHHHHhc-cCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhh
Confidence 777777777777777777777777777777777777777777777 77777777777777777777777777777654
No 74
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=100.00 E-value=4.6e-32 Score=187.07 Aligned_cols=152 Identities=29% Similarity=0.317 Sum_probs=144.7
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHc-CCCCcccCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHhhCC
Q 026440 81 GWAPIHSAASIGNVTIVEMLLSK-GADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGN 159 (238)
Q Consensus 81 ~~t~l~~a~~~~~~~~~~~Ll~~-~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~ 159 (238)
+.+||+.|+..|+.+++++|++. +.+++..+..|.||||+ +..|+.+++++|++.|++++..+..|.||||.|+..|+
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 80 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQV-MMFGSTAIALELLKQGASPNVQDTSGTSPVHDAARTGF 80 (156)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred cchHHHHHHHhCCHHHHHHHHHhhCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCc
Confidence 45899999999999999999998 34888889999999999 99999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCCccccCCCcHHHHHHHhCCHHHHHHHHhcCCCCccCCCCCCchhhccccccchHHHHHHHH
Q 026440 160 SALCELLIEEGAEVDATDKAGQTPLMNAVICYNKEVALLLIRHGADVDVEDKEGYTVLGRASNDFRPILIDAAKA 234 (238)
Q Consensus 160 ~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~~~~ 234 (238)
.+++++|+++|++++.++..|.||||+|+..++.+++++|+++ ++++.+|..|.||+++|+..++.+++++|..
T Consensus 81 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~ 154 (156)
T 1bd8_A 81 LDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE-SDLHRRDARGLTPLELALQRGAQDLVDILQG 154 (156)
T ss_dssp HHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT-SCTTCCCTTSCCHHHHHHHSCCHHHHHHHHT
T ss_pred HHHHHHHHHcCCCCCCcCCCCCcHHHHHHHhChHHHHHHHHhc-cCCCCcCCCCCCHHHHHHHcCcHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999 9999999999999999999999888887764
No 75
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=100.00 E-value=3.3e-33 Score=205.92 Aligned_cols=179 Identities=22% Similarity=0.214 Sum_probs=126.2
Q ss_pred CCCchHHHHHHHcCCHHHHHHHHhhcccccccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCchHHHHHH
Q 026440 43 DDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAA 122 (238)
Q Consensus 43 ~~~~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~l~~a~ 122 (238)
..|.||||.|+..++.+.++.|++.|.+.. . +..+.|||+.|+..|+.+++++|++.|++++.++..|.||||+|+
T Consensus 3 ~~g~t~L~~a~~~~~~~~~~~ll~~g~~~~---~-~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~ 78 (239)
T 1ycs_B 3 ITGQVSLPPGKRTNLRKTGSERIAHGMRVK---F-NPLPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAV 78 (239)
T ss_dssp --------------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSCCCCCTTSCCHHHHHH
T ss_pred ccccccCchhhhhhhHHHHHHHhccCCCcc---c-CchhhHHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHH
Confidence 458899999999999999999998887643 2 356789999999999999999999999888888888999999999
Q ss_pred HcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHhhCCHHHHHHHHhcCCCCCccccCCC-cHHHHH--HHhCCHHHHHHH
Q 026440 123 SKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELLIEEGAEVDATDKAGQ-TPLMNA--VICYNKEVALLL 199 (238)
Q Consensus 123 ~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~-t~l~~a--~~~~~~~~~~~L 199 (238)
..|+.+++++|+++|++++..|..|.||||+|+..++.+++++|+++|++++..+..|. ||+|+| +..|+.+++++|
T Consensus 79 ~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~g~~~~~~~L 158 (239)
T 1ycs_B 79 CAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFL 158 (239)
T ss_dssp HHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHCCSSSTTCCCHHHHH
T ss_pred HcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcceecCCCCcchHHHHHHhhhccHHHHHHH
Confidence 99999999999999999998888999999999999999999999999999988887776 999988 777889999999
Q ss_pred HhcCCCCccC---------CCCCCchhhccccccc
Q 026440 200 IRHGADVDVE---------DKEGYTVLGRASNDFR 225 (238)
Q Consensus 200 l~~~~~~~~~---------~~~g~tpl~~a~~~~~ 225 (238)
+++|++++.. +..+.+|.+++.+.+.
T Consensus 159 l~~~a~~~~~~~~~~~al~d~~~~~~~eLa~~~G~ 193 (239)
T 1ycs_B 159 YGVQEKMGIMNKGVIYALWDYEPQNDDELPMKEGD 193 (239)
T ss_dssp HHHHHHTTTTGGGEEEESSCBCCSSTTBCCBCSSC
T ss_pred HHhhhcccccccceEEEEeccCCCCCCcccccCCC
Confidence 9988887765 4567788887776654
No 76
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=100.00 E-value=2.3e-33 Score=215.91 Aligned_cols=214 Identities=18% Similarity=0.190 Sum_probs=162.3
Q ss_pred hhhhccChHHHHHHHcCChHHHHHHHHHHhhhhcCC---------------CCCCCchHHHHHHHcCCHHHHHHHHhhcc
Q 026440 5 IDQTIKDKDLFKAAETGDSSTFKSLSKQQLLKSLSL---------------RNDDDRTLLHVAASCGHPEVVEILLSVDE 69 (238)
Q Consensus 5 ~~~~~~~~~l~~a~~~g~~~~v~~l~~~~~~~~~~~---------------~~~~~~t~L~~A~~~~~~~~~~~Ll~~~~ 69 (238)
..+..+.+.++ |+.++|+.|++.+....... ......+.+|.|+..+..+++++|++.+.
T Consensus 47 ~~~~~g~~~~~-----g~~~~v~~Ll~~g~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~g~ 121 (327)
T 1sw6_A 47 KALPSPVVNDN-----EQKMKLEAFLQRLLFPEIQEMPTSLNNDSSNRNSEGGSSNQQQQHVSFDSLLQEVNDAFPNTQL 121 (327)
T ss_dssp ECBCCCCCCCH-----HHHHHHHHHHHHHHC-------------------------------CHHHHHHHHHHHCTTSCC
T ss_pred cCCCCCCcccC-----chhHHHHHHHHhccCCccccchHhhhcccccccccccCCccchhHHHHHhhHHHHHHHHHhcCC
Confidence 33444454444 99999999999884211100 01111233577888888899999998777
Q ss_pred ccccccc-ccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCchHHHHHHHcCC---HHHHHHHHHcC-CCCCCCC
Q 026440 70 SANVVNA-VDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGW---LKIVELLISRG-AKINSKD 144 (238)
Q Consensus 70 ~~~~~~~-~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~---~~~~~~l~~~~-~~~~~~~ 144 (238)
+ ++. .+..|+||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+ .++++.|++.+ .+++..+
T Consensus 122 d---vn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~~~~d 198 (327)
T 1sw6_A 122 N---LNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILED 198 (327)
T ss_dssp C---SCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGGGGEEC
T ss_pred C---cccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhcccccHHHHHHHHHhhhccccCCC
Confidence 6 666 78999999999999999999999999999999999999999999999988 67778888775 6788899
Q ss_pred CCCCcHHHHHHh----hCCHHHHHHHHhc--------------------CCCCCccccCCCcHHHHHHHhCCHHHHHHHH
Q 026440 145 KVGCTALHRGAS----TGNSALCELLIEE--------------------GAEVDATDKAGQTPLMNAVICYNKEVALLLI 200 (238)
Q Consensus 145 ~~~~t~l~~a~~----~~~~~~~~~Ll~~--------------------~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll 200 (238)
..|.||||+|+. .++.+++++|++. |++++.++..|.||||.|+. +++|+
T Consensus 199 ~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~------~~~Ll 272 (327)
T 1sw6_A 199 SMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLD------LKWII 272 (327)
T ss_dssp TTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCS------HHHHH
T ss_pred CCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHH------HHHHH
Confidence 999999999999 8999999999987 89999999999999999985 89999
Q ss_pred hcCCCCccCCCCCCchhhccccccchHHHHHHHH
Q 026440 201 RHGADVDVEDKEGYTVLGRASNDFRPILIDAAKA 234 (238)
Q Consensus 201 ~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~~~~ 234 (238)
++ +++.+|..|+||||+|+..++.+++++|..
T Consensus 273 ~~--~~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~ 304 (327)
T 1sw6_A 273 AN--MLNAQDSNGDTCLNIAARLGNISIVDALLD 304 (327)
T ss_dssp HH--TTTCCCTTSCCHHHHHHHHCCHHHHHHHHH
T ss_pred Hh--CCCCCCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 88 688999999999999999999888777653
No 77
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.97 E-value=5.3e-31 Score=181.74 Aligned_cols=145 Identities=26% Similarity=0.262 Sum_probs=112.3
Q ss_pred ccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCc-HHHH
Q 026440 75 NAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCT-ALHR 153 (238)
Q Consensus 75 ~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t-~l~~ 153 (238)
...+..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+ .|+.+++++|+++|++++..+..|.| |||+
T Consensus 6 ~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~~d~~g~ttpL~~ 84 (156)
T 1bi7_B 6 GSSMEPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPNCADPATLTRPVHD 84 (156)
T ss_dssp ----CCSTTHHHHHHHHTCHHHHHHHHTTTCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCTTTCCCHHHH
T ss_pred cCCCccchHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCCCCcCCCCCcHHHHH
Confidence 344567888899999888899999999888888888888899998885 88899999999999999988888988 9999
Q ss_pred HHhhCCHHHHHHHHhcCCCCCccccCCCcHHHHHHHhCCHHHHHHHHhcCCCCccCCCCCCchhhcc
Q 026440 154 GASTGNSALCELLIEEGAEVDATDKAGQTPLMNAVICYNKEVALLLIRHGADVDVEDKEGYTVLGRA 220 (238)
Q Consensus 154 a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpl~~a 220 (238)
|+..++.+++++|+++|++++.++..|.||||+|+..++.+++++|+++|++++.++..|.||.+.+
T Consensus 85 A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~~~~~ 151 (156)
T 1bi7_B 85 AAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAGGTRGSNHARIDAAEGP 151 (156)
T ss_dssp HHHHTCHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC-----------------
T ss_pred HHHCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCHHHHHHHHHHcCCCCCccCcCcCcccccC
Confidence 9999999999999999999999999999999999999999999999999999999999999887744
No 78
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.97 E-value=1e-30 Score=192.61 Aligned_cols=155 Identities=20% Similarity=0.229 Sum_probs=116.3
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHhhC
Q 026440 79 EEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTG 158 (238)
Q Consensus 79 ~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~ 158 (238)
..|.|||+.|+..++.+.++.|+++|++++.. ..+.|||+.|+..|+.+++++|++.|++++..|..|.||||+|+..|
T Consensus 3 ~~g~t~L~~a~~~~~~~~~~~ll~~g~~~~~~-~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g 81 (239)
T 1ycs_B 3 ITGQVSLPPGKRTNLRKTGSERIAHGMRVKFN-PLPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAG 81 (239)
T ss_dssp -----------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSCCCCCTTSCCHHHHHHHHT
T ss_pred ccccccCchhhhhhhHHHHHHHhccCCCcccC-chhhHHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcC
Confidence 47899999999999999999999999998864 67899999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhcCCCCCccccCCCcHHHHHHHhCCHHHHHHHHhcCCCCccCCCCCC-chhhcc--ccccchHHHHHHHH
Q 026440 159 NSALCELLIEEGAEVDATDKAGQTPLMNAVICYNKEVALLLIRHGADVDVEDKEGY-TVLGRA--SNDFRPILIDAAKA 234 (238)
Q Consensus 159 ~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~-tpl~~a--~~~~~~~~~~~~~~ 234 (238)
+.+++++|+++|++++.++..|.||||+|+..++.+++++|+++|++++.++..|. ||+++| ...++.+++++|..
T Consensus 82 ~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~g~~~~~~~Ll~ 160 (239)
T 1ycs_B 82 HTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYG 160 (239)
T ss_dssp CHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHCCSSSTTCCCHHHHHHH
T ss_pred CHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcceecCCCCcchHHHHHHhhhccHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999998777 999999 78899998888764
No 79
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.97 E-value=1.7e-31 Score=195.32 Aligned_cols=164 Identities=26% Similarity=0.306 Sum_probs=146.3
Q ss_pred HHHHHhhcccccccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCchHHHHHHHcCCHHHHHHHHHcCCCC
Q 026440 61 VEILLSVDESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKI 140 (238)
Q Consensus 61 ~~~Ll~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~ 140 (238)
++.|++.+..+...+..+..+.|||++|+..|+.+++++|++.|++++..+..|.||||+|+..|+.+++++|++.|+++
T Consensus 1 v~~ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~ 80 (229)
T 2vge_A 1 MRSVLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAICGANYSIVDFLITAGANV 80 (229)
T ss_dssp ---------CCCCCCCTTSCHHHHHHHHHHHTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred CeehhccCCCCccccccccchhHHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC
Confidence 35677777877767777788999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCcHHHHHHhhCCHHHHHHHHhcCCCCCccc-cCCCcHHHHH--HHhCCHHHHHHHHhcCCCCccCCCCCCchh
Q 026440 141 NSKDKVGCTALHRGASTGNSALCELLIEEGAEVDATD-KAGQTPLMNA--VICYNKEVALLLIRHGADVDVEDKEGYTVL 217 (238)
Q Consensus 141 ~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~-~~~~t~l~~a--~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpl 217 (238)
+..|..|.||||+|+..|+.+++++|+++|++++..+ ..|.||||+| +..++.+++++|+++|++++..|..|.||+
T Consensus 81 n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~l 160 (229)
T 2vge_A 81 NSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATTLSDGATAFEKCDPYREGYADCATYLADVEQSMGLMNSGAVYAL 160 (229)
T ss_dssp TCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHHTTTSGGGEEEES
T ss_pred CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCCcccccCCchHHH
Confidence 9999999999999999999999999999999999986 6999999999 999999999999999999999999999999
Q ss_pred hcccccc
Q 026440 218 GRASNDF 224 (238)
Q Consensus 218 ~~a~~~~ 224 (238)
+.+....
T Consensus 161 ~~~~~~~ 167 (229)
T 2vge_A 161 WDYSAEF 167 (229)
T ss_dssp SCBCCSS
T ss_pred HHHhhcc
Confidence 9665543
No 80
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.97 E-value=6e-30 Score=172.41 Aligned_cols=131 Identities=28% Similarity=0.316 Sum_probs=104.3
Q ss_pred cccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCC-CCcHHH
Q 026440 74 VNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKV-GCTALH 152 (238)
Q Consensus 74 ~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~-~~t~l~ 152 (238)
++..+..|.||||+|+..++.+++++|++.|++++.++..|.||||+|+. ++.+++++|+++|++++..+.. |.||||
T Consensus 5 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~ 83 (136)
T 1d9s_A 5 IHMLGGSSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPNCADPATLTRPVH 83 (136)
T ss_dssp CSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSSCCBTTTTBCHHH
T ss_pred ccCCCCCCccHHHHHHHcCCHHHHHHHHHcCCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCCCcCCCCCCCHHH
Confidence 45566777778888887777888888887777777777777888888877 8888888888888888777777 788888
Q ss_pred HHHhhCCHHHHHHHHhcCCCCCccccCCCcHHHHHHHhCCHHHHHHHHhcCCC
Q 026440 153 RGASTGNSALCELLIEEGAEVDATDKAGQTPLMNAVICYNKEVALLLIRHGAD 205 (238)
Q Consensus 153 ~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~ 205 (238)
+|+..++.+++++|+++|++++.++..|.||||+|+..++.+++++|+++|+|
T Consensus 84 ~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~Gad 136 (136)
T 1d9s_A 84 DAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQGHRDIARYLHAATGD 136 (136)
T ss_dssp HHHHHTCHHHHHHHHHTCCCCCCCSSSSSCHHHHHHHHTCHHHHHHHHHHHCC
T ss_pred HHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 88888888888888888888888888888888888888888888888887765
No 81
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.97 E-value=1.1e-30 Score=184.83 Aligned_cols=159 Identities=18% Similarity=0.129 Sum_probs=103.2
Q ss_pred CchHHHHHHHcCCHHHHHHHHhhccccccccccc-CCCCcHHHHHHHcCCH----HHHHHHHHcCCCCcccCCCCchHHH
Q 026440 45 DRTLLHVAASCGHPEVVEILLSVDESANVVNAVD-EEGWAPIHSAASIGNV----TIVEMLLSKGADVNLKNDGGRTALH 119 (238)
Q Consensus 45 ~~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~-~~~~t~l~~a~~~~~~----~~~~~Ll~~~~~~~~~~~~~~~~l~ 119 (238)
+.++|+.|+..|+.+.++.++..+. +..+ ..|+||||+|+..++. +++++|+++|++++.++..|.||||
T Consensus 6 ~~~~l~~Aa~~g~~~~~~~l~~~~~-----~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpLh 80 (186)
T 3t8k_A 6 EYRTVSAAAMLGTYEDFLELFEKGY-----EDKESVLKSNILYDVLRNNNDEARYKISMFLINKGADIKSRTKEGTTLFF 80 (186)
T ss_dssp HCSSHHHHHHHSCHHHHHHHHHHSS-----SCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCCTTCCCTHH
T ss_pred cccHHHHHHHcCCHHHHHHHHhcCc-----ccccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCCCCCCcHHH
Confidence 3456777777777777666665432 2222 4567777777776654 3677777777777777777777777
Q ss_pred HHHHcCC------HHHHHHHHHcCCCCCCCCCCCC-cHHHHHHhhC-----CHHHHHHHHh-cCCCCCccccCCCcHHHH
Q 026440 120 YAASKGW------LKIVELLISRGAKINSKDKVGC-TALHRGASTG-----NSALCELLIE-EGAEVDATDKAGQTPLMN 186 (238)
Q Consensus 120 ~a~~~~~------~~~~~~l~~~~~~~~~~~~~~~-t~l~~a~~~~-----~~~~~~~Ll~-~~~~~~~~~~~~~t~l~~ 186 (238)
+|+..++ .+++++|+++|++++..|..|. ||||+|+..+ ..+++++|++ +|++++.+|..|.||||+
T Consensus 81 ~a~~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~d~~G~TpL~~ 160 (186)
T 3t8k_A 81 PLFQGGGNDITGTTELCKIFLEKGADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTALEF 160 (186)
T ss_dssp HHHHHCTTCHHHHHHHHHHHHHTTCCSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCCCTTSCCHHHH
T ss_pred HHHHcCCcchhhHHHHHHHHHHCCCCCCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcccCCCCCCHHHH
Confidence 7776664 4566777777777777777776 6777776633 2346666776 677777777777777777
Q ss_pred HHHhCCHHHHHHHHhcCCCCcc
Q 026440 187 AVICYNKEVALLLIRHGADVDV 208 (238)
Q Consensus 187 a~~~~~~~~~~~Ll~~~~~~~~ 208 (238)
|+..++.+++++|.++....+.
T Consensus 161 A~~~~~~~~v~~L~~~~~~~~~ 182 (186)
T 3t8k_A 161 VKRCQKPIALKMMEDYIKKYNL 182 (186)
T ss_dssp HHTTTCHHHHHHHHHHHHHHTC
T ss_pred HHHcCCHHHHHHHHHHHHHHhc
Confidence 7777777777766665433333
No 82
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.97 E-value=2.4e-30 Score=182.96 Aligned_cols=154 Identities=24% Similarity=0.284 Sum_probs=139.5
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCCCcccC-CCCchHHHHHHHcCCH----HHHHHHHHcCCCCCCCCCCCCcHHHHHH
Q 026440 81 GWAPIHSAASIGNVTIVEMLLSKGADVNLKN-DGGRTALHYAASKGWL----KIVELLISRGAKINSKDKVGCTALHRGA 155 (238)
Q Consensus 81 ~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~-~~~~~~l~~a~~~~~~----~~~~~l~~~~~~~~~~~~~~~t~l~~a~ 155 (238)
++++|+.|+..|+.+.++.++..+.+ ..+ ..|.||||+|+..++. +++++|++.|++++..+..|.||||+|+
T Consensus 6 ~~~~l~~Aa~~g~~~~~~~l~~~~~~--~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpLh~a~ 83 (186)
T 3t8k_A 6 EYRTVSAAAMLGTYEDFLELFEKGYE--DKESVLKSNILYDVLRNNNDEARYKISMFLINKGADIKSRTKEGTTLFFPLF 83 (186)
T ss_dssp HCSSHHHHHHHSCHHHHHHHHHHSSS--CHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCCTTCCCTHHHHH
T ss_pred cccHHHHHHHcCCHHHHHHHHhcCcc--cccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCCCCCCcHHHHHH
Confidence 45789999999999999999988754 334 6799999999999975 5899999999999999999999999999
Q ss_pred hhCC------HHHHHHHHhcCCCCCccccCCC-cHHHHHHHh-----CCHHHHHHHHh-cCCCCccCCCCCCchhhcccc
Q 026440 156 STGN------SALCELLIEEGAEVDATDKAGQ-TPLMNAVIC-----YNKEVALLLIR-HGADVDVEDKEGYTVLGRASN 222 (238)
Q Consensus 156 ~~~~------~~~~~~Ll~~~~~~~~~~~~~~-t~l~~a~~~-----~~~~~~~~Ll~-~~~~~~~~~~~g~tpl~~a~~ 222 (238)
..++ .+++++|+++|++++.+|..|. ||||+|+.. +..+++++|++ +|++++.+|..|.|||++|..
T Consensus 84 ~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~d~~G~TpL~~A~~ 163 (186)
T 3t8k_A 84 QGGGNDITGTTELCKIFLEKGADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTALEFVKR 163 (186)
T ss_dssp HHCTTCHHHHHHHHHHHHHTTCCSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHT
T ss_pred HcCCcchhhHHHHHHHHHHCCCCCCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcccCCCCCCHHHHHHH
Confidence 9987 5789999999999999999999 999999983 44679999999 999999999999999999999
Q ss_pred ccchHHHHHHHHHh
Q 026440 223 DFRPILIDAAKAML 236 (238)
Q Consensus 223 ~~~~~~~~~~~~~~ 236 (238)
.++.+++++|+..+
T Consensus 164 ~~~~~~v~~L~~~~ 177 (186)
T 3t8k_A 164 CQKPIALKMMEDYI 177 (186)
T ss_dssp TTCHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHH
Confidence 99999999988654
No 83
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.96 E-value=3.2e-32 Score=211.84 Aligned_cols=156 Identities=17% Similarity=0.182 Sum_probs=117.8
Q ss_pred cChHHHHHHHcCChHHHHHHHHHHhhh-hcCCCCCCCchHHHHHHHcCCHHHHHHHHhhcccccccccccCCCCcHHHHH
Q 026440 10 KDKDLFKAAETGDSSTFKSLSKQQLLK-SLSLRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSA 88 (238)
Q Consensus 10 ~~~~l~~a~~~g~~~~v~~l~~~~~~~-~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~t~l~~a 88 (238)
..++||.|+..|+.++|++|++.+.+. .....+..|.||||+|+..|+.+++++|++.|.+....+..+.. .||||+|
T Consensus 92 ~~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-~TpLh~A 170 (376)
T 2aja_A 92 SEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN-YHAFRLA 170 (376)
T ss_dssp HHHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-HHHHHHH
T ss_pred cCCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC-CCHHHHH
Confidence 347889999999999999998876311 11234556788999999999999999999887532211222223 8899999
Q ss_pred HHcCCHHHHHHHHHcCCCCcc--cCCCCchHHHHHH-HcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHhhCCHHHHHH
Q 026440 89 ASIGNVTIVEMLLSKGADVNL--KNDGGRTALHYAA-SKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCEL 165 (238)
Q Consensus 89 ~~~~~~~~~~~Ll~~~~~~~~--~~~~~~~~l~~a~-~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ 165 (238)
+..|+.+++++|+++|++++. .+..|.||||+|+ ..|+.+++++|++.|. .+.||++.|+..|+.+++++
T Consensus 171 a~~G~~eiv~~Ll~~ga~~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~ga-------~~~taL~~Aa~~g~~evv~l 243 (376)
T 2aja_A 171 AENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPV-------MLAYAEIHEFEYGEKYVNPF 243 (376)
T ss_dssp HHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHH-------HHHHHHHCTTTTTTTTHHHH
T ss_pred HHCCCHHHHHHHHHcCCccchhccCCCCCCHHHHHHHHCCCHHHHHHHHhCCC-------ccchHHHHHHHCCCHHHHHH
Confidence 999999999999999888776 6777889999999 8999999999988663 27788888888888888888
Q ss_pred HHhcCCCC
Q 026440 166 LIEEGAEV 173 (238)
Q Consensus 166 Ll~~~~~~ 173 (238)
|+++|+++
T Consensus 244 L~~~ga~~ 251 (376)
T 2aja_A 244 IARHVNRL 251 (376)
T ss_dssp HHHHHHHH
T ss_pred HHhcCccc
Confidence 88766543
No 84
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.96 E-value=2.1e-28 Score=162.53 Aligned_cols=126 Identities=47% Similarity=0.696 Sum_probs=106.0
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHhhCC
Q 026440 80 EGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGN 159 (238)
Q Consensus 80 ~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~ 159 (238)
+|+|||++|+..++.+++++|++.|.+++..+..|.|||++|+..++.+++++|++.|++++..+..|.||||+|+..++
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~ 80 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGH 80 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCh
Confidence 36788888888888888888888888887777788888888888888888888888888888888888888888888888
Q ss_pred HHHHHHHHhcCCCCCccccCCCcHHHHHHHhCCHHHHHHHHhcCCC
Q 026440 160 SALCELLIEEGAEVDATDKAGQTPLMNAVICYNKEVALLLIRHGAD 205 (238)
Q Consensus 160 ~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~ 205 (238)
.+++++|+++|++++.++..|.||+++|+..++.+++++|+++|++
T Consensus 81 ~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 81 LEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 126 (126)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred HHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence 8888888888888888888888888888888888888888888875
No 85
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.96 E-value=1.9e-29 Score=173.96 Aligned_cols=145 Identities=23% Similarity=0.332 Sum_probs=118.3
Q ss_pred CCCCCCCchHHHHHHHcCCHHHHHHHHhhcccccccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCch-H
Q 026440 39 SLRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRT-A 117 (238)
Q Consensus 39 ~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~-~ 117 (238)
...+..|.||||+|+..|+.+++++|++.+.+ ++..+..|+||||+|+ .++.+++++|++.|++++.++..|.| |
T Consensus 6 ~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~---~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~~d~~g~ttp 81 (156)
T 1bi7_B 6 GSSMEPSADWLATAAARGRVEEVRALLEAGAN---PNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPNCADPATLTRP 81 (156)
T ss_dssp ----CCSTTHHHHHHHHTCHHHHHHHHTTTCC---TTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCTTTCCCH
T ss_pred cCCCccchHHHHHHHHcCCHHHHHHHHHcCCC---CCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCCCCcCCCCCcHH
Confidence 34567899999999999999999999998776 6777889999999995 89999999999999999999999999 9
Q ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHhhCCHHHHHHHHhcCCCCCccccCCCcHHHHH
Q 026440 118 LHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELLIEEGAEVDATDKAGQTPLMNA 187 (238)
Q Consensus 118 l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a 187 (238)
||+|+..|+.+++++|+++|++++..+..|.||||+|+..++.+++++|+++|++++.++..|.||.+.+
T Consensus 82 L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~~~~~ 151 (156)
T 1bi7_B 82 VHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAGGTRGSNHARIDAAEGP 151 (156)
T ss_dssp HHHHHHHTCHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC-----------------
T ss_pred HHHHHHCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCHHHHHHHHHHcCCCCCccCcCcCcccccC
Confidence 9999999999999999999999999999999999999999999999999999999999999999987744
No 86
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.96 E-value=3.7e-32 Score=211.47 Aligned_cols=196 Identities=16% Similarity=0.169 Sum_probs=160.1
Q ss_pred HHHHHHH-cCChHHHHHHHHHHhhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhhcccccccccccCCCCcHHHHHHHc
Q 026440 13 DLFKAAE-TGDSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASI 91 (238)
Q Consensus 13 ~l~~a~~-~g~~~~v~~l~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~t~l~~a~~~ 91 (238)
.+++|.. .++.+.++++++.+ .++.||||+|+..|+.+++++|++.+.........+..+.||||+|+..
T Consensus 68 ~~~~a~~~~~~~~~~~~l~~~g---------~~~~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~ 138 (376)
T 2aja_A 68 CLYYAHYNRNAKQLWSDAHKKG---------IKSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAEN 138 (376)
T ss_dssp HHHHHHTTTTCTTHHHHHHHHT---------CCHHHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHT
T ss_pred HHHHHHhcCCCHHHHHHHHHcC---------CCcCCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHc
Confidence 4556655 57788888887665 3356999999999999999999998764332334455778999999999
Q ss_pred CCHHHHHHHHHcCCCC---cccCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCC--CCCCCCcHHHHHH-hhCCHHHHHH
Q 026440 92 GNVTIVEMLLSKGADV---NLKNDGGRTALHYAASKGWLKIVELLISRGAKINS--KDKVGCTALHRGA-STGNSALCEL 165 (238)
Q Consensus 92 ~~~~~~~~Ll~~~~~~---~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~--~~~~~~t~l~~a~-~~~~~~~~~~ 165 (238)
|+.+++++|+++|+++ +..+.. .||||+|+..|+.+++++|+++|++++. .+..|.||||+|+ ..|+.+++++
T Consensus 139 G~~eiv~~Ll~~gad~~~~~i~~~~-~TpLh~Aa~~G~~eiv~~Ll~~ga~~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~ 217 (376)
T 2aja_A 139 GHLHVLNRLCELAPTEIMAMIQAEN-YHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINF 217 (376)
T ss_dssp TCHHHHHHHHHSCTTTHHHHHSHHH-HHHHHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHH
T ss_pred CCHHHHHHHHhCCCCccccccCCCC-CCHHHHHHHCCCHHHHHHHHHcCCccchhccCCCCCCHHHHHHHHCCCHHHHHH
Confidence 9999999999999753 222222 8999999999999999999999999876 7888999999999 9999999999
Q ss_pred HHhcCCCCCccccCCCcHHHHHHHhCCHHHHHHHHhcCCCCccCCCCCCchhhccccccchHHH
Q 026440 166 LIEEGAEVDATDKAGQTPLMNAVICYNKEVALLLIRHGADVDVEDKEGYTVLGRASNDFRPILI 229 (238)
Q Consensus 166 Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpl~~a~~~~~~~~~ 229 (238)
|++.|. .|.||+++|+..|+.+++++|+++|++++..+ ++++.|..+++.+++
T Consensus 218 Ll~~ga-------~~~taL~~Aa~~g~~evv~lL~~~ga~~~~~~----~~l~~A~~~g~~~vv 270 (376)
T 2aja_A 218 LLDCPV-------MLAYAEIHEFEYGEKYVNPFIARHVNRLKEMH----DAFKLSNPDGVFDLV 270 (376)
T ss_dssp HTTSHH-------HHHHHHHCTTTTTTTTHHHHHHHHHHHHHHHH----TTTTTTSSSSCCCCS
T ss_pred HHhCCC-------ccchHHHHHHHCCCHHHHHHHHhcCccccccc----HHHHHHHHCCChhhh
Confidence 998763 37899999999999999999999999887654 477888877776643
No 87
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.96 E-value=4.1e-29 Score=168.28 Aligned_cols=130 Identities=24% Similarity=0.282 Sum_probs=123.7
Q ss_pred CCCCcccCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHhhCCHHHHHHHHhcCCCCCccccC-CCc
Q 026440 104 GADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELLIEEGAEVDATDKA-GQT 182 (238)
Q Consensus 104 ~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~-~~t 182 (238)
+++++..+..|.|||+.|+..|+.+++++|++.|++++..+..|.||||+|+. ++.+++++|+++|++++.++.. |.|
T Consensus 2 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~~g~t 80 (136)
T 1d9s_A 2 SPGIHMLGGSSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPNCADPATLTR 80 (136)
T ss_dssp CCCCSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSSCCBTTTTBC
T ss_pred CCCccCCCCCCccHHHHHHHcCCHHHHHHHHHcCCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCCCcCCCCCCC
Confidence 45677888899999999999999999999999999999999999999999999 9999999999999999999999 999
Q ss_pred HHHHHHHhCCHHHHHHHHhcCCCCccCCCCCCchhhccccccchHHHHHHHH
Q 026440 183 PLMNAVICYNKEVALLLIRHGADVDVEDKEGYTVLGRASNDFRPILIDAAKA 234 (238)
Q Consensus 183 ~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~~~~ 234 (238)
|||+|+..++.+++++|+++|++++.+|..|.||+++|+..++.+++++|..
T Consensus 81 ~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~ 132 (136)
T 1d9s_A 81 PVHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQGHRDIARYLHA 132 (136)
T ss_dssp HHHHHHHHTCHHHHHHHHHTCCCCCCCSSSSSCHHHHHHHHTCHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999888877653
No 88
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.96 E-value=7.6e-29 Score=167.22 Aligned_cols=129 Identities=29% Similarity=0.392 Sum_probs=114.1
Q ss_pred CCCCcccCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHhhCCHHHHHHHHhcCCCCCccccCCCcH
Q 026440 104 GADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELLIEEGAEVDATDKAGQTP 183 (238)
Q Consensus 104 ~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~ 183 (238)
|+++ .++..|.||||+|+..|+.+++++|++.|++++..+..|.||||+|+..++.+++++|+++|++++.++..|.||
T Consensus 1 G~d~-~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~ 79 (137)
T 3c5r_A 1 GIDP-FTNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDSP 79 (137)
T ss_dssp ---C-CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCGGGCCH
T ss_pred CCCC-CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccCcCCCCCCH
Confidence 4455 567788999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCHHHHHHHHhcCCCCccCCCCCCchhhccccccchHHHHHHH
Q 026440 184 LMNAVICYNKEVALLLIRHGADVDVEDKEGYTVLGRASNDFRPILIDAAK 233 (238)
Q Consensus 184 l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~~~ 233 (238)
||+|+..++.+++++|+++|++++.+|..|.||+++|...+..++++.++
T Consensus 80 L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~l~~l~ 129 (137)
T 3c5r_A 80 LHDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDDESMKSLLLLPE 129 (137)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGCCCHHHHHHHSCC-
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhccHHHHHhhcc
Confidence 99999999999999999999999999999999999999888877766554
No 89
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.96 E-value=3.9e-28 Score=163.48 Aligned_cols=125 Identities=35% Similarity=0.500 Sum_probs=78.4
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHhhC
Q 026440 79 EEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTG 158 (238)
Q Consensus 79 ~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~ 158 (238)
..+.||||+|+..|+.+++++|++.|++++..+..|.||||+|+..++.+++++|++.|++++..+..|.||||+|+..+
T Consensus 12 ~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~ 91 (136)
T 2jab_A 12 SDLGKKLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAFIG 91 (136)
T ss_dssp CHHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHT
T ss_pred ccccHHHHHHHHhCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcC
Confidence 34556666666666666666666666666666666666666666666666666666666666666666666666666666
Q ss_pred CHHHHHHHHhcCCCCCccccCCCcHHHHHHHhCCHHHHHHHHhcC
Q 026440 159 NSALCELLIEEGAEVDATDKAGQTPLMNAVICYNKEVALLLIRHG 203 (238)
Q Consensus 159 ~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~ 203 (238)
+.+++++|+++|++++..+..|.||||+|+..++.+++++|+++|
T Consensus 92 ~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 92 HLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred CHHHHHHHHHcCCCCcCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 666666666666666666666666666666666666666666554
No 90
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.95 E-value=3.3e-27 Score=156.73 Aligned_cols=126 Identities=48% Similarity=0.736 Sum_probs=115.1
Q ss_pred CCchHHHHHHHcCCHHHHHHHHhhcccccccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCchHHHHHHH
Q 026440 44 DDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAAS 123 (238)
Q Consensus 44 ~~~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~l~~a~~ 123 (238)
+|.||||.|+..|+.+++++|++.+.+ ++..+..|.|||++|+..++.+++++|++.|++++.++..|.|||++|+.
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~---~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~ 77 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGAD---VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAAR 77 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTCC---TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCCC---CCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCcHHHHHHH
Confidence 478999999999999999999988766 56677889999999999999999999999999999888899999999999
Q ss_pred cCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHhhCCHHHHHHHHhcCCC
Q 026440 124 KGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELLIEEGAE 172 (238)
Q Consensus 124 ~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~ 172 (238)
.++.+++++|+++|++++..+..|.||+++|+..++.+++++|+++|++
T Consensus 78 ~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 78 NGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 126 (126)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred cChHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence 9999999999999999999999999999999999999999999998875
No 91
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.95 E-value=1.4e-27 Score=160.70 Aligned_cols=123 Identities=33% Similarity=0.424 Sum_probs=118.2
Q ss_pred CCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHhhCCHHHHHHHHhcCCCCCccccCCCcHHHHHHHhC
Q 026440 112 DGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELLIEEGAEVDATDKAGQTPLMNAVICY 191 (238)
Q Consensus 112 ~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~ 191 (238)
..+.|||+.|+..|+.+++++|++.|++++..+..|.||||+|+..++.+++++|+++|++++..+..|.||||+|+..+
T Consensus 12 ~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~ 91 (136)
T 2jab_A 12 SDLGKKLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAFIG 91 (136)
T ss_dssp CHHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHT
T ss_pred ccccHHHHHHHHhCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcC
Confidence 45789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhcCCCCccCCCCCCchhhccccccchHHHHHHHH
Q 026440 192 NKEVALLLIRHGADVDVEDKEGYTVLGRASNDFRPILIDAAKA 234 (238)
Q Consensus 192 ~~~~~~~Ll~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~~~~ 234 (238)
+.+++++|+++|++++.+|..|.||+++|+..++.+++++|..
T Consensus 92 ~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~ 134 (136)
T 2jab_A 92 HLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQK 134 (136)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred CHHHHHHHHHcCCCCcCcCCCCCCHHHHHHHCCCHHHHHHHHH
Confidence 9999999999999999999999999999999999888887754
No 92
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.95 E-value=3.5e-27 Score=156.05 Aligned_cols=118 Identities=28% Similarity=0.380 Sum_probs=107.1
Q ss_pred CCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHhhCCHHHHHHHHhcCCCCCccccCCCcHHHHHHHh
Q 026440 111 NDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELLIEEGAEVDATDKAGQTPLMNAVIC 190 (238)
Q Consensus 111 ~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~ 190 (238)
+..+.|||+.|+..|+.+++++|++.|++++..+..|.||||+|+..++.+++++|+++|++++.++..|.||||+|+..
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~~ 83 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYE 83 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHH
T ss_pred ccccchHHHHHHHcCCHHHHHHHHHcCCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHc
Confidence 34678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHhcCCCCccCCCCCCchhhccccccchHH
Q 026440 191 YNKEVALLLIRHGADVDVEDKEGYTVLGRASNDFRPIL 228 (238)
Q Consensus 191 ~~~~~~~~Ll~~~~~~~~~~~~g~tpl~~a~~~~~~~~ 228 (238)
++.+++++|+++|++++.+|..|.||+++|...+..++
T Consensus 84 ~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~l 121 (123)
T 3aaa_C 84 GHVSCVKLLLSKGADKTVKGPDGLTAFEATDNQAIKAL 121 (123)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCCHHHHHH
T ss_pred CCHHHHHHHHHcCCCCCCcCCCCCCHHHHhCCHHHHHH
Confidence 99999999999999999999999999999966554443
No 93
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.94 E-value=2.4e-26 Score=174.40 Aligned_cols=140 Identities=24% Similarity=0.189 Sum_probs=125.4
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCCCcc------cCCCCchHHHHHHHc---CCHHHHHHHHHcCCCCCCCCCCCCcHH
Q 026440 81 GWAPIHSAASIGNVTIVEMLLSKGADVNL------KNDGGRTALHYAASK---GWLKIVELLISRGAKINSKDKVGCTAL 151 (238)
Q Consensus 81 ~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~------~~~~~~~~l~~a~~~---~~~~~~~~l~~~~~~~~~~~~~~~t~l 151 (238)
..++|+.|+..++.+.++.|++.|++++. .+..|.||||+|+.. ++.+++++|+++|++++..|..|.|||
T Consensus 151 ~~~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~~G~TpL 230 (301)
T 2b0o_E 151 EPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTAL 230 (301)
T ss_dssp CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCCTTCCCHH
T ss_pred hHHHHhhhhhccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCCCCCCCHH
Confidence 45679999999999999999999999887 578899999999997 899999999999999999999999999
Q ss_pred HHHHhhCCHHHHHHHHhcCCCCCccccCCCcHHHHHHHhCCHHHHHHHHhcCCCCccCCCCCCchhhccccccch
Q 026440 152 HRGASTGNSALCELLIEEGAEVDATDKAGQTPLMNAVICYNKEVALLLIRHGADVDVEDKEGYTVLGRASNDFRP 226 (238)
Q Consensus 152 ~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpl~~a~~~~~~ 226 (238)
|+|+..|+.+++++|+++|++++.+|..|.||||+|+..++.+++++|+++|++ .|.||||+|+..++.
T Consensus 231 h~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~------~g~tpLh~A~~~g~~ 299 (301)
T 2b0o_E 231 HYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAG------TFAFPLHVDYSWVIS 299 (301)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCCSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH------TTSSCCC--------
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCC------CCCChhHHHHhcCCc
Confidence 999999999999999999999999999999999999999999999999999886 488999999998864
No 94
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.94 E-value=2.7e-27 Score=159.57 Aligned_cols=128 Identities=31% Similarity=0.423 Sum_probs=102.8
Q ss_pred cccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHH
Q 026440 76 AVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGA 155 (238)
Q Consensus 76 ~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~ 155 (238)
.++..|+||||+|+..++.+++++|++.|++++.++..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+
T Consensus 5 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~ 84 (137)
T 3c5r_A 5 FTNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDSPLHDAA 84 (137)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCGGGCCHHHHHH
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccCcCCCCCCHHHHHH
Confidence 34667888888888888888888888888888877888888888888888888888888888888888888888888888
Q ss_pred hhCCHHHHHHHHhcCCCCCccccCCCcHHHHHHHhCCHHHHHHHHhcC
Q 026440 156 STGNSALCELLIEEGAEVDATDKAGQTPLMNAVICYNKEVALLLIRHG 203 (238)
Q Consensus 156 ~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~ 203 (238)
..++.+++++|+++|++++.++..|.||+++|+..+..+++++|.+.+
T Consensus 85 ~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~l~~l~~~~ 132 (137)
T 3c5r_A 85 KNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDDESMKSLLLLPEKNE 132 (137)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGCCCHHHHHHHSCC----
T ss_pred HcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhccHHHHHhhccccc
Confidence 888888888888888888888888888888888877777777776554
No 95
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.94 E-value=8e-27 Score=164.92 Aligned_cols=109 Identities=35% Similarity=0.454 Sum_probs=58.1
Q ss_pred CCchHHHHHHHcCCHHHHHHHHhhcccccccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccC-CCCchHHHHHH
Q 026440 44 DDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKN-DGGRTALHYAA 122 (238)
Q Consensus 44 ~~~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~-~~~~~~l~~a~ 122 (238)
.|.||||.|+..|+.+++++|++ +.+ ++..+..|+||||+|+..|+.+++++|+++|++++.++ ..|.||||+|+
T Consensus 43 ~g~t~L~~A~~~g~~~~v~~Ll~-~~~---~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~ 118 (183)
T 3deo_A 43 EYETPWWTAARKADEQALSQLLE-DRD---VDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAA 118 (183)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHTT-TSC---TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHh-cCC---CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHH
Confidence 44555555555555555555554 333 34444555555555555555555555555555555444 44555555555
Q ss_pred HcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHh
Q 026440 123 SKGWLKIVELLISRGAKINSKDKVGCTALHRGAS 156 (238)
Q Consensus 123 ~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~ 156 (238)
..|+.+++++|+++|++++..|..|.||+++|+.
T Consensus 119 ~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~ 152 (183)
T 3deo_A 119 GYVRPEVVEALVELGADIEVEDERGLTALELARE 152 (183)
T ss_dssp HTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHH
T ss_pred hcCcHHHHHHHHHcCCCCcCCCCCCCCHHHHHHH
Confidence 5555555555555555555555555555555543
No 96
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.94 E-value=4e-27 Score=171.55 Aligned_cols=138 Identities=28% Similarity=0.340 Sum_probs=112.6
Q ss_pred ccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCchHHHHHHHcCCHHHHHHHHHc-CCCCCCCCCCCCcHHHHHH
Q 026440 77 VDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISR-GAKINSKDKVGCTALHRGA 155 (238)
Q Consensus 77 ~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~-~~~~~~~~~~~~t~l~~a~ 155 (238)
.+..|.||||+|+..|+.+++++|++.|++++.++..|.||||+|+..|+.+++++|++. |++++..+..|.||||+|+
T Consensus 69 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL~~A~ 148 (222)
T 3ehr_A 69 QAESIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAAA 148 (222)
T ss_dssp HEEEESCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHHHHHH
T ss_pred cccccccccccccccCcHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCCHHHHHH
Confidence 345678999999999999999999999999998899999999999999999999999998 9999999999999999999
Q ss_pred hhCCHHHHHHHHhcCCCCCccccCCCcHHHHHHHhCCHHHHHHHHhcCCCCccCCCCCC
Q 026440 156 STGNSALCELLIEEGAEVDATDKAGQTPLMNAVICYNKEVALLLIRHGADVDVEDKEGY 214 (238)
Q Consensus 156 ~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~ 214 (238)
..|+.+++++|+++|++++.++..|.|||++|+..+..++++.|++.|++....+.+|+
T Consensus 149 ~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~~~~~~~~~~ 207 (222)
T 3ehr_A 149 WKGYADIVQLLLAKGARTDLRNIEKKLAFDMATNAACASLLKKKQGTDAVRTLSNAEDY 207 (222)
T ss_dssp HHTCHHHHHHHHHHTCCSCCCCTTSCCHHHHCCSHHHHHHHC-----------------
T ss_pred HcCCHHHHHHHHHcCCCCccccCCCCCHHHHhcchhHHHHHHHHhccchhhhccchhhh
Confidence 99999999999999999999999999999999999999999999999999888776554
No 97
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.94 E-value=1.8e-26 Score=170.35 Aligned_cols=142 Identities=29% Similarity=0.330 Sum_probs=128.1
Q ss_pred CCCchHHHHHHHcCCHHHHHHHHhhcccccccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccC-CCCchHHHHH
Q 026440 43 DDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKN-DGGRTALHYA 121 (238)
Q Consensus 43 ~~~~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~-~~~~~~l~~a 121 (238)
..|.||||+|+..|+.+++++|++ +.+ ++..+..|+||||+|+..|+.+++++|+++|++++.++ ..|.||||+|
T Consensus 43 ~~g~t~L~~A~~~g~~~~v~~Ll~-~~~---~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~A 118 (244)
T 3ui2_A 43 SEYETPWWTAARKADEQALSQLLE-DRD---VDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMA 118 (244)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHTTT-TCC---TTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHH
T ss_pred cCCCCHHHHHHHcCCHHHHHHHHc-CCC---CCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHH
Confidence 468899999999999999999998 655 67788899999999999999999999999999999888 7899999999
Q ss_pred HHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHhhCCHHHHHHHHhcCCCCCccccCCCcHHHHHHHhCCHHHHHHHHh
Q 026440 122 ASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELLIEEGAEVDATDKAGQTPLMNAVICYNKEVALLLIR 201 (238)
Q Consensus 122 ~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~ 201 (238)
+..|+.+++++|+++|++++..+..|.||+|+|+..+. ...+.|||++|+..|+.+++++|++
T Consensus 119 ~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~-----------------~~~~~~~l~~a~~~g~~~iv~~L~~ 181 (244)
T 3ui2_A 119 AGYVRPEVVEALVELGADIEVEDERGLTALELAREILK-----------------TTPKGNPMQFGRRIGLEKVINVLEG 181 (244)
T ss_dssp HHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHHT-----------------TCCCSSHHHHHHHHHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHHHh-----------------ccCCCCHHHHHHHcChHHHHHHHHH
Confidence 99999999999999999999999999999999985221 2457899999999999999999998
Q ss_pred cCCC
Q 026440 202 HGAD 205 (238)
Q Consensus 202 ~~~~ 205 (238)
++++
T Consensus 182 ~~~~ 185 (244)
T 3ui2_A 182 QVFE 185 (244)
T ss_dssp HHEE
T ss_pred hccc
Confidence 6443
No 98
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.94 E-value=4.9e-26 Score=160.90 Aligned_cols=139 Identities=28% Similarity=0.300 Sum_probs=125.7
Q ss_pred cCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCC-CCCCcHHHHHHh
Q 026440 78 DEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKD-KVGCTALHRGAS 156 (238)
Q Consensus 78 ~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~-~~~~t~l~~a~~ 156 (238)
+..|.||||.|+..|+.+++++|++ |.+++.++..|.||||+|+..|+.+++++|+++|++++..+ ..|.||||+|+.
T Consensus 41 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~~ 119 (183)
T 3deo_A 41 VSEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAG 119 (183)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHTT-TSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHHHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHh-cCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHh
Confidence 4578899999999999999999999 99999999999999999999999999999999999999888 789999999999
Q ss_pred hCCHHHHHHHHhcCCCCCccccCCCcHHHHHHHhCCHHHHHHHHhcCCCCccCCCCCCchhhccccccchHHHHHHHH
Q 026440 157 TGNSALCELLIEEGAEVDATDKAGQTPLMNAVICYNKEVALLLIRHGADVDVEDKEGYTVLGRASNDFRPILIDAAKA 234 (238)
Q Consensus 157 ~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~~~~ 234 (238)
.++.+++++|+++|++++.++..|.||||+|+..++. ..+.+|+++|...++.+++++|+.
T Consensus 120 ~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~-----------------~~~~~~l~~a~~~~~~~i~~~L~~ 180 (183)
T 3deo_A 120 YVRPEVVEALVELGADIEVEDERGLTALELAREILKT-----------------TPKGNPMQFGRRIGLEKVINVLEG 180 (183)
T ss_dssp TTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHHHT-----------------CCCCSHHHHHHHHHHHHHHHHHHT
T ss_pred cCcHHHHHHHHHcCCCCcCCCCCCCCHHHHHHHhccC-----------------cccccHHHHHHHcCHHHHHHHHHH
Confidence 9999999999999999999999999999999875443 235789999999999999888875
No 99
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.94 E-value=2.6e-26 Score=169.53 Aligned_cols=139 Identities=28% Similarity=0.300 Sum_probs=128.9
Q ss_pred cCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCC-CCCCcHHHHHHh
Q 026440 78 DEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKD-KVGCTALHRGAS 156 (238)
Q Consensus 78 ~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~-~~~~t~l~~a~~ 156 (238)
+..|.||||+|+..|+.+++++|++ |.+++.++..|.||||+|+..|+.+++++|+++|++++..+ ..|.||||+|+.
T Consensus 42 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~A~~ 120 (244)
T 3ui2_A 42 VSEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAG 120 (244)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHTTT-TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHHHH
T ss_pred ccCCCCHHHHHHHcCCHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHH
Confidence 3578899999999999999999999 99999999999999999999999999999999999999888 779999999999
Q ss_pred hCCHHHHHHHHhcCCCCCccccCCCcHHHHHHHhCCHHHHHHHHhcCCCCccCCCCCCchhhccccccchHHHHHHHH
Q 026440 157 TGNSALCELLIEEGAEVDATDKAGQTPLMNAVICYNKEVALLLIRHGADVDVEDKEGYTVLGRASNDFRPILIDAAKA 234 (238)
Q Consensus 157 ~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~~~~ 234 (238)
.|+.+++++|+++|++++.++..|.||||+|+..+. ...+.||+++|...++.++++++..
T Consensus 121 ~g~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~-----------------~~~~~~~l~~a~~~g~~~iv~~L~~ 181 (244)
T 3ui2_A 121 YVRPEVVEALVELGADIEVEDERGLTALELAREILK-----------------TTPKGNPMQFGRRIGLEKVINVLEG 181 (244)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHHT-----------------TCCCSSHHHHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHHHh-----------------ccCCCCHHHHHHHcChHHHHHHHHH
Confidence 999999999999999999999999999999986322 2457899999999999999998875
No 100
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.93 E-value=1.2e-25 Score=170.59 Aligned_cols=143 Identities=20% Similarity=0.186 Sum_probs=122.9
Q ss_pred CCchHHHHHHHcCCHHHHHHHHhhcccccccc---cccCCCCcHHHHHHHc---CCHHHHHHHHHcCCCCcccCCCCchH
Q 026440 44 DDRTLLHVAASCGHPEVVEILLSVDESANVVN---AVDEEGWAPIHSAASI---GNVTIVEMLLSKGADVNLKNDGGRTA 117 (238)
Q Consensus 44 ~~~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~---~~~~~~~t~l~~a~~~---~~~~~~~~Ll~~~~~~~~~~~~~~~~ 117 (238)
...++|+.|+..|+.+.++.|+..+.+..... ..+..|.||||+|+.. ++.+++++|+++|++++.++..|.||
T Consensus 150 ~~~~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~~G~Tp 229 (301)
T 2b0o_E 150 PEPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTA 229 (301)
T ss_dssp -CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCCTTCCCH
T ss_pred chHHHHhhhhhccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCCCCCCCH
Confidence 34578999999999999999998877633210 0578899999999997 89999999999999999999999999
Q ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHhhCCHHHHHHHHhcCCCCCccccCCCcHHHHHHHhCC
Q 026440 118 LHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELLIEEGAEVDATDKAGQTPLMNAVICYN 192 (238)
Q Consensus 118 l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~ 192 (238)
||+|+..|+.+++++|+++|++++..|..|.|||++|+..++.+++++|+++|++ .|.||||+|+..|.
T Consensus 230 Lh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~------~g~tpLh~A~~~g~ 298 (301)
T 2b0o_E 230 LHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAG------TFAFPLHVDYSWVI 298 (301)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCCSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH------TTSSCCC-------
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCC------CCCChhHHHHhcCC
Confidence 9999999999999999999999999999999999999999999999999998876 47899999998765
No 101
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.93 E-value=8.4e-26 Score=149.39 Aligned_cols=110 Identities=33% Similarity=0.432 Sum_probs=84.1
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHhhC
Q 026440 79 EEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTG 158 (238)
Q Consensus 79 ~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~ 158 (238)
..+.|||++|+..|+.+++++|++.|.+++..+..|.||||+|+..++.+++++|++.|++++..|..|.||||+|+..+
T Consensus 5 ~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~~~ 84 (123)
T 3aaa_C 5 SMCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYEG 84 (123)
T ss_dssp --CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHHT
T ss_pred cccchHHHHHHHcCCHHHHHHHHHcCCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcC
Confidence 45667777777777777777777777777777777777777777777777777777777777777777778888888777
Q ss_pred CHHHHHHHHhcCCCCCccccCCCcHHHHHH
Q 026440 159 NSALCELLIEEGAEVDATDKAGQTPLMNAV 188 (238)
Q Consensus 159 ~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~ 188 (238)
+.+++++|+++|++++.++..|.||+|+|.
T Consensus 85 ~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~ 114 (123)
T 3aaa_C 85 HVSCVKLLLSKGADKTVKGPDGLTAFEATD 114 (123)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHCC
T ss_pred CHHHHHHHHHcCCCCCCcCCCCCCHHHHhC
Confidence 888888888777777777777888888773
No 102
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.93 E-value=1.5e-25 Score=163.19 Aligned_cols=123 Identities=25% Similarity=0.333 Sum_probs=115.0
Q ss_pred CCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHhhCCHHHHHHHHhc-CCCCCccccCCCcHHHHHHH
Q 026440 111 NDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELLIEE-GAEVDATDKAGQTPLMNAVI 189 (238)
Q Consensus 111 ~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~-~~~~~~~~~~~~t~l~~a~~ 189 (238)
+..|.||||+|+..|+.+++++|++.|++++..+..|.||||+|+..++.+++++|++. |++++.++..|.||||+|+.
T Consensus 70 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL~~A~~ 149 (222)
T 3ehr_A 70 AESIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAAAW 149 (222)
T ss_dssp EEEESCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHHHHHHH
T ss_pred ccccccccccccccCcHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCCHHHHHHH
Confidence 45688999999999999999999999999999999999999999999999999999999 99999999999999999999
Q ss_pred hCCHHHHHHHHhcCCCCccCCCCCCchhhccccccchHHHHHHH
Q 026440 190 CYNKEVALLLIRHGADVDVEDKEGYTVLGRASNDFRPILIDAAK 233 (238)
Q Consensus 190 ~~~~~~~~~Ll~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~~~ 233 (238)
.|+.+++++|+++|++++.+|.+|.||+++|+..++.++++.+.
T Consensus 150 ~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~l~~l~ 193 (222)
T 3ehr_A 150 KGYADIVQLLLAKGARTDLRNIEKKLAFDMATNAACASLLKKKQ 193 (222)
T ss_dssp HTCHHHHHHHHHHTCCSCCCCTTSCCHHHHCCSHHHHHHHC---
T ss_pred cCCHHHHHHHHHcCCCCccccCCCCCHHHHhcchhHHHHHHHHh
Confidence 99999999999999999999999999999999988877666543
No 103
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.92 E-value=1.9e-24 Score=162.31 Aligned_cols=124 Identities=23% Similarity=0.307 Sum_probs=98.8
Q ss_pred CcHHHHHHHcCCHHHHHHHHHcCCCCc------ccCCCCchHHHHHHHc---CCHHHHHHHHHcCCCCCCCCCCCCcHHH
Q 026440 82 WAPIHSAASIGNVTIVEMLLSKGADVN------LKNDGGRTALHYAASK---GWLKIVELLISRGAKINSKDKVGCTALH 152 (238)
Q Consensus 82 ~t~l~~a~~~~~~~~~~~Ll~~~~~~~------~~~~~~~~~l~~a~~~---~~~~~~~~l~~~~~~~~~~~~~~~t~l~ 152 (238)
.++|+.|+..++.+.++.+++.|.+++ ..+..|.||||+|+.. ++.+++++|+++|++++..|..|.||||
T Consensus 131 l~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d~~g~TpLh 210 (278)
T 1dcq_A 131 LHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALH 210 (278)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCHHH
T ss_pred hhhhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCccccCCCCCCHHH
Confidence 357788888888888888888877743 3356778888888887 7788888888888888888888888888
Q ss_pred HHHhhCCHHHHHHHHhcCCCCCccccCCCcHHHHHHHhCCHHHHHHHHhcCCC
Q 026440 153 RGASTGNSALCELLIEEGAEVDATDKAGQTPLMNAVICYNKEVALLLIRHGAD 205 (238)
Q Consensus 153 ~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~ 205 (238)
+|+..|+.+++++|+++|++++.+|..|.||||+|+..++.+++++|+++|++
T Consensus 211 ~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~ 263 (278)
T 1dcq_A 211 YCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQALSG 263 (278)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTT
T ss_pred HHHHcCCHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 88888888888888888888888888888888888888888888888887764
No 104
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.92 E-value=7.8e-24 Score=171.34 Aligned_cols=129 Identities=25% Similarity=0.241 Sum_probs=113.9
Q ss_pred CcHHHHHHHcCCHHHHHHHHHcCCCCccc------CCCCchHHHHHHH---cCCHHHHHHHHHcCCCCCCCCCCCCcHHH
Q 026440 82 WAPIHSAASIGNVTIVEMLLSKGADVNLK------NDGGRTALHYAAS---KGWLKIVELLISRGAKINSKDKVGCTALH 152 (238)
Q Consensus 82 ~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~------~~~~~~~l~~a~~---~~~~~~~~~l~~~~~~~~~~~~~~~t~l~ 152 (238)
.+.|+.|+..|+.++++.|++.|++++.. +..|.||||+|+. .|+.+++++|+++|++++..|..|.||||
T Consensus 133 ~~~L~~A~~~g~~~~v~~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~~d~~g~TpLh 212 (497)
T 3lvq_E 133 PQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALH 212 (497)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTTCCCSSSCCHHH
T ss_pred HHHHHHHHhccCHHHHHHHHhhcccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCCCccCCCCCcHHH
Confidence 36799999999999999999999998876 7789999999977 78999999999999999999999999999
Q ss_pred HHHhhCCHHHHHHHHhcCCCCCccccCCCcHHHHHHHhCCHHHHHHHHhcCCCCccCC
Q 026440 153 RGASTGNSALCELLIEEGAEVDATDKAGQTPLMNAVICYNKEVALLLIRHGADVDVED 210 (238)
Q Consensus 153 ~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~ 210 (238)
+|+..|+.+++++|+++|++++.+|..|.||||+|+..++.+++++|+++|++++...
T Consensus 213 ~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~ 270 (497)
T 3lvq_E 213 YAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAGTFAFP 270 (497)
T ss_dssp HHTTTTCHHHHHHHHHTCCCCSCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC------
T ss_pred HHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhCCCCCCCc
Confidence 9999999999999999999999999999999999999999999999999999988743
No 105
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.91 E-value=8.4e-24 Score=158.73 Aligned_cols=188 Identities=15% Similarity=0.124 Sum_probs=139.8
Q ss_pred CCCCCchHHHHHHHcCCHHHHHHHHhhcccccccccccCCCCcHHHHHHHcCCHHHHHHHHHcCC-CCcccCCCCchHHH
Q 026440 41 RNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSKGA-DVNLKNDGGRTALH 119 (238)
Q Consensus 41 ~~~~~~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~-~~~~~~~~~~~~l~ 119 (238)
.|..+.+.++.+...|+....+++...-..+. ... ....++. ......-..+++..... ..........++|+
T Consensus 62 ~d~~~~~~l~~~~~~GN~~~n~i~e~~l~~~~-~~k--P~~~s~~---~~~~~fI~aKYl~~~f~~~~~~~~~~~l~~l~ 135 (278)
T 1dcq_A 62 LDVLGTSELLLAKNIGNAGFNEIMECCLPSED-PVK--PNPGSDM---IARKDYITAKYMERRYARKKHADTAAKLHSLC 135 (278)
T ss_dssp TSCCCGGGGHHHHHSCHHHHHHHHTTTCCSSS-CCS--CCTTCCH---HHHHHHHHHHHTTCTTSCCCSSSHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHcCcHHHHHHHHhhCChhh-cCC--CCCCCCH---HHHHHHHHHHHHHhhcccccccccchhhhhhh
Confidence 45667788999988888877777653221110 000 0111111 11111111222222211 11111123457899
Q ss_pred HHHHcCCHHHHHHHHHcCCCCC------CCCCCCCcHHHHHHhh---CCHHHHHHHHhcCCCCCccccCCCcHHHHHHHh
Q 026440 120 YAASKGWLKIVELLISRGAKIN------SKDKVGCTALHRGAST---GNSALCELLIEEGAEVDATDKAGQTPLMNAVIC 190 (238)
Q Consensus 120 ~a~~~~~~~~~~~l~~~~~~~~------~~~~~~~t~l~~a~~~---~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~ 190 (238)
.|+..|+.+.+..+++.|.+++ ..+..|.||||+|+.. ++.+++++|+++|++++.+|..|.||||+|+..
T Consensus 136 ~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d~~g~TpLh~A~~~ 215 (278)
T 1dcq_A 136 EAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLT 215 (278)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCHHHHHHHT
T ss_pred hHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCccccCCCCCCHHHHHHHc
Confidence 9999999999999999999844 4578899999999999 899999999999999999999999999999999
Q ss_pred CCHHHHHHHHhcCCCCccCCCCCCchhhccccccchHHHHHHHH
Q 026440 191 YNKEVALLLIRHGADVDVEDKEGYTVLGRASNDFRPILIDAAKA 234 (238)
Q Consensus 191 ~~~~~~~~Ll~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~~~~ 234 (238)
|+.+++++|+++|++++.+|..|.||||+|+..++.+++++|..
T Consensus 216 g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~ 259 (278)
T 1dcq_A 216 DNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQ 259 (278)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred CCHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 99999999999999999999999999999999999998888765
No 106
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.91 E-value=8.2e-24 Score=164.05 Aligned_cols=144 Identities=27% Similarity=0.330 Sum_probs=116.7
Q ss_pred CCCcHHHHHHHc-CCHHHHHHHHHcCCCCcccC--CCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHh
Q 026440 80 EGWAPIHSAASI-GNVTIVEMLLSKGADVNLKN--DGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGAS 156 (238)
Q Consensus 80 ~~~t~l~~a~~~-~~~~~~~~Ll~~~~~~~~~~--~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~ 156 (238)
.+.++|+.|+.. ++.+++++|++.|++++..+ ..|.||||+|+..|+.+++++|+++|++++..|..|.||||+|+.
T Consensus 198 ~~~t~L~~Aa~~~g~~~~v~~LL~~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpLh~A~~ 277 (368)
T 3jue_A 198 HPGALLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATI 277 (368)
T ss_dssp CHHHHHHHHTSSSCCHHHHHHHHHTTCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred CCCcHHHHHHHccCCHHHHHHHHHcCCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHH
Confidence 445799999999 99999999999999999887 789999999999999999999999999999999999999999999
Q ss_pred hCCHHHHHHHHhcCCCCCccccCCCcHHHHHHHhCCHHHHHHHHhcC---CCCccCCCCCCchhhccccc
Q 026440 157 TGNSALCELLIEEGAEVDATDKAGQTPLMNAVICYNKEVALLLIRHG---ADVDVEDKEGYTVLGRASND 223 (238)
Q Consensus 157 ~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~---~~~~~~~~~g~tpl~~a~~~ 223 (238)
.++.+++++|+++|++++..|..|.||||+|+..++.+++++|++.+ .+....+..+.|+++++...
T Consensus 278 ~g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~~~~~~~~~~~~~t~l~i~~~~ 347 (368)
T 3jue_A 278 LGHTGLACLFLKRGADLGARDSEGRDPLTIAMETANADIVTLLRLAKMREAEAAQGQAGDETYLDIFRDF 347 (368)
T ss_dssp HTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC----------------------
T ss_pred cCcHHHHHHHHHCcCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCcccccccCCCCCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999865 44445566778888876554
No 107
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.91 E-value=2.2e-23 Score=130.80 Aligned_cols=92 Identities=48% Similarity=0.676 Sum_probs=74.5
Q ss_pred CchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHhhCCHHHHHHHHhcCCCCCccccCCCcHHHHHHHhCCH
Q 026440 114 GRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELLIEEGAEVDATDKAGQTPLMNAVICYNK 193 (238)
Q Consensus 114 ~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~ 193 (238)
|.||||+|+..|+.+++++|++.|++++..+..|.||||+|+..++.+++++|+++|++++.++..|.||||+|+..++.
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~ 81 (93)
T 1n0q_A 2 GRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHL 81 (93)
T ss_dssp -CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCH
T ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCH
Confidence 66788888888888888888888888888888888888888888888888888888888888888888888888888888
Q ss_pred HHHHHHHhcCCC
Q 026440 194 EVALLLIRHGAD 205 (238)
Q Consensus 194 ~~~~~Ll~~~~~ 205 (238)
+++++|+++|++
T Consensus 82 ~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 82 EVVKLLLEAGAY 93 (93)
T ss_dssp HHHHHHHHTTCC
T ss_pred HHHHHHHHcCCC
Confidence 888888888764
No 108
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.90 E-value=5.2e-24 Score=139.06 Aligned_cols=108 Identities=35% Similarity=0.475 Sum_probs=94.5
Q ss_pred cCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHhhCCHHHHHHHHhcCCCCCccccCCCcHHHHHHH
Q 026440 110 KNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELLIEEGAEVDATDKAGQTPLMNAVI 189 (238)
Q Consensus 110 ~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~ 189 (238)
+|..|.||||+|+..|+.+++++|++.|++++..+..|.||||.|+..++.+++++|+++|++++.++..|.||||+|+.
T Consensus 5 ~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~tpl~~A~~ 84 (115)
T 2l6b_A 5 GSKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLAKK 84 (115)
T ss_dssp CSCSSCCHHHHHHHHTCHHHHHHHTTTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCTTCCCTTHHHHT
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHH
Confidence 56678888888888888888998888888888888889999999999999999999999999999888899999999999
Q ss_pred hCCHHHHHHHHhcCCCCccCCCCCCchh
Q 026440 190 CYNKEVALLLIRHGADVDVEDKEGYTVL 217 (238)
Q Consensus 190 ~~~~~~~~~Ll~~~~~~~~~~~~g~tpl 217 (238)
.++.+++++|+++|++++.++..|.+|-
T Consensus 85 ~~~~~~~~~Ll~~ga~~n~~~~~~~~~~ 112 (115)
T 2l6b_A 85 NGHHEIVKLLDAKGADVNARSWGSSHHH 112 (115)
T ss_dssp TTCHHHHHHHHTTSSSHHHHSCCCC---
T ss_pred CCCHHHHHHHHHcCCCCCcCCccccccc
Confidence 9999999999999999999998888874
No 109
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.90 E-value=5.6e-23 Score=166.32 Aligned_cols=139 Identities=22% Similarity=0.207 Sum_probs=113.5
Q ss_pred CCchHHHHHHHcCCHHHHHHHHhhccccccc---ccccCCCCcHHHHHHH---cCCHHHHHHHHHcCCCCcccCCCCchH
Q 026440 44 DDRTLLHVAASCGHPEVVEILLSVDESANVV---NAVDEEGWAPIHSAAS---IGNVTIVEMLLSKGADVNLKNDGGRTA 117 (238)
Q Consensus 44 ~~~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~---~~~~~~~~t~l~~a~~---~~~~~~~~~Ll~~~~~~~~~~~~~~~~ 117 (238)
...+.||.|+..|+.+.++.|+..|.+.+.. ...+..|.||||+|+. .|+.+++++|+++|++++.+|..|.||
T Consensus 131 ~~~~~L~~A~~~g~~~~v~~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~~d~~g~Tp 210 (497)
T 3lvq_E 131 PEPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTA 210 (497)
T ss_dssp -CHHHHHHHHHHTCHHHHHHHHHTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTTCCCSSSCCH
T ss_pred ccHHHHHHHHhccCHHHHHHHHhhcccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCCCccCCCCCcH
Confidence 3457799999999999999999988774321 1226789999999976 789999999999999999999999999
Q ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHhhCCHHHHHHHHhcCCCCCccccCCCcHHHHHH
Q 026440 118 LHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELLIEEGAEVDATDKAGQTPLMNAV 188 (238)
Q Consensus 118 l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~ 188 (238)
||+|+..|+.+++++|+++|++++..|..|.||||+|+..|+.+++++|+++|++++. +|+|.+.
T Consensus 211 Lh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~------~~~h~~~ 275 (497)
T 3lvq_E 211 LHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAGTFA------FPLHVDY 275 (497)
T ss_dssp HHHHTTTTCHHHHHHHHHTCCCCSCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC-----------------
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhCCCCCC------Ccceeec
Confidence 9999999999999999999999999999999999999999999999999999999875 4566543
No 110
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.90 E-value=4.7e-23 Score=159.83 Aligned_cols=146 Identities=25% Similarity=0.282 Sum_probs=117.0
Q ss_pred CCCchHHHHHHHc-CCHHHHHHHHhhccccccccccc--CCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCchHHH
Q 026440 43 DDDRTLLHVAASC-GHPEVVEILLSVDESANVVNAVD--EEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALH 119 (238)
Q Consensus 43 ~~~~t~L~~A~~~-~~~~~~~~Ll~~~~~~~~~~~~~--~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~l~ 119 (238)
..+.++||.|+.. |+.++++.|+..|.+ ++..+ ..|.||||+|+..++.+++++|+++|++++..+..|.||||
T Consensus 197 ~~~~t~L~~Aa~~~g~~~~v~~LL~~Gad---vn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpLh 273 (368)
T 3jue_A 197 LHPGALLFRASGHPPSLPTMADALAHGAD---VNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLH 273 (368)
T ss_dssp CCHHHHHHHHTSSSCCHHHHHHHHHTTCC---TTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred CCCCcHHHHHHHccCCHHHHHHHHHcCCC---CCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHH
Confidence 3456899999999 999999999998887 45555 78999999999999999999999999999999999999999
Q ss_pred HHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHhhCCHHHHHHHHhcC---CCCCccccCCCcHHHHHHHhC
Q 026440 120 YAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELLIEEG---AEVDATDKAGQTPLMNAVICY 191 (238)
Q Consensus 120 ~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~---~~~~~~~~~~~t~l~~a~~~~ 191 (238)
+|+..|+.+++++|+++|++++..|..|.||||+|+..++.+++++|+..+ .+....+..+.|++..+....
T Consensus 274 ~A~~~g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~~~~~~~~~~~~~t~l~i~~~~~ 348 (368)
T 3jue_A 274 HATILGHTGLACLFLKRGADLGARDSEGRDPLTIAMETANADIVTLLRLAKMREAEAAQGQAGDETYLDIFRDFS 348 (368)
T ss_dssp HHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC-----------------------
T ss_pred HHHHcCcHHHHHHHHHCcCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCcccccccCCCCCCHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999875 333344556778887766543
No 111
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.89 E-value=2.1e-22 Score=126.23 Aligned_cols=91 Identities=48% Similarity=0.772 Sum_probs=54.1
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHhhCCH
Q 026440 81 GWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNS 160 (238)
Q Consensus 81 ~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~ 160 (238)
|+||||+|+..++.+++++|++.|++++.++..|.||||+|+..|+.+++++|+++|++++..|..|.||+|+|+..++.
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~ 81 (93)
T 1n0q_A 2 GRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHL 81 (93)
T ss_dssp -CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCH
T ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCH
Confidence 45566666666666666666666555555555566666666666666666666666666655555566666666666666
Q ss_pred HHHHHHHhcCC
Q 026440 161 ALCELLIEEGA 171 (238)
Q Consensus 161 ~~~~~Ll~~~~ 171 (238)
+++++|+++|+
T Consensus 82 ~~~~~Ll~~ga 92 (93)
T 1n0q_A 82 EVVKLLLEAGA 92 (93)
T ss_dssp HHHHHHHHTTC
T ss_pred HHHHHHHHcCC
Confidence 66666665554
No 112
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.88 E-value=8.3e-23 Score=133.30 Aligned_cols=107 Identities=38% Similarity=0.585 Sum_probs=66.9
Q ss_pred ccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHh
Q 026440 77 VDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGAS 156 (238)
Q Consensus 77 ~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~ 156 (238)
++..|+||||+|+..++.+++++|++.|++++..+..|.||||+|+..++.+++++|+++|++++..+..|.|||++|+.
T Consensus 5 ~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~tpl~~A~~ 84 (115)
T 2l6b_A 5 GSKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLAKK 84 (115)
T ss_dssp CSCSSCCHHHHHHHHTCHHHHHHHTTTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCTTCCCTTHHHHT
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHH
Confidence 34556666666666666666666666666666666666666666666666666666666666666666666666666666
Q ss_pred hCCHHHHHHHHhcCCCCCccccCCCcH
Q 026440 157 TGNSALCELLIEEGAEVDATDKAGQTP 183 (238)
Q Consensus 157 ~~~~~~~~~Ll~~~~~~~~~~~~~~t~ 183 (238)
.++.+++++|+++|++++..+..|.+|
T Consensus 85 ~~~~~~~~~Ll~~ga~~n~~~~~~~~~ 111 (115)
T 2l6b_A 85 NGHHEIVKLLDAKGADVNARSWGSSHH 111 (115)
T ss_dssp TTCHHHHHHHHTTSSSHHHHSCCCC--
T ss_pred CCCHHHHHHHHHcCCCCCcCCcccccc
Confidence 666666666666666666666655554
No 113
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.84 E-value=6.4e-21 Score=123.24 Aligned_cols=90 Identities=31% Similarity=0.332 Sum_probs=57.4
Q ss_pred CCCCCCcHHHHHHhhCCHHHHHHHHhcCCCCCccccCCCcHHHHHHHhCCHHHHHHHHhcCCCCccCCCCCCchhhcccc
Q 026440 143 KDKVGCTALHRGASTGNSALCELLIEEGAEVDATDKAGQTPLMNAVICYNKEVALLLIRHGADVDVEDKEGYTVLGRASN 222 (238)
Q Consensus 143 ~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpl~~a~~ 222 (238)
.+..+.|+||.|+..++.+++++|++.|++++.++..|.||||+|+..++.+++++|+++|++++.+|..|.||+++|+.
T Consensus 20 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~ 99 (110)
T 2zgd_A 20 MGSDLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDISID 99 (110)
T ss_dssp --CCHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred cCCccchHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccCCCcHHHHHHH
Confidence 34455666666666666666666666666666666666666666666666666666666666666666666666666666
Q ss_pred ccchHHHHHH
Q 026440 223 DFRPILIDAA 232 (238)
Q Consensus 223 ~~~~~~~~~~ 232 (238)
.++.+++++|
T Consensus 100 ~~~~~~~~~L 109 (110)
T 2zgd_A 100 NGNEDLAEIL 109 (110)
T ss_dssp HTCHHHHHHH
T ss_pred cCCHHHHHHh
Confidence 6666666554
No 114
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.82 E-value=1.9e-19 Score=116.30 Aligned_cols=90 Identities=34% Similarity=0.434 Sum_probs=69.5
Q ss_pred cCCCCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHhhCCHHHHHHHHhcCCCCCccccCCCcHHHHHHH
Q 026440 110 KNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELLIEEGAEVDATDKAGQTPLMNAVI 189 (238)
Q Consensus 110 ~~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~ 189 (238)
.+..|.|+||+|+..|+.+++++|++.|++++..|..|.||||+|+..++.+++++|+++|++++.++..|.||||+|+.
T Consensus 20 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~ 99 (110)
T 2zgd_A 20 MGSDLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDISID 99 (110)
T ss_dssp --CCHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred cCCccchHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccCCCcHHHHHHH
Confidence 34567777777777777777777777777777777777888888888888888888888888877777778888888888
Q ss_pred hCCHHHHHHH
Q 026440 190 CYNKEVALLL 199 (238)
Q Consensus 190 ~~~~~~~~~L 199 (238)
.++.+++++|
T Consensus 100 ~~~~~~~~~L 109 (110)
T 2zgd_A 100 NGNEDLAEIL 109 (110)
T ss_dssp HTCHHHHHHH
T ss_pred cCCHHHHHHh
Confidence 8888877765
No 115
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=79.75 E-value=9.3 Score=30.83 Aligned_cols=153 Identities=12% Similarity=0.044 Sum_probs=86.9
Q ss_pred hHHHHHHHcCChHHHHHHHHHHhhhhcCCCCCCCchHHHHHHHcCC--------------HHHHHHHHhhcccccccccc
Q 026440 12 KDLFKAAETGDSSTFKSLSKQQLLKSLSLRNDDDRTLLHVAASCGH--------------PEVVEILLSVDESANVVNAV 77 (238)
Q Consensus 12 ~~l~~a~~~g~~~~v~~l~~~~~~~~~~~~~~~~~t~L~~A~~~~~--------------~~~~~~Ll~~~~~~~~~~~~ 77 (238)
..|..+++.|+++.+..+++......+ .++....+.|..||.... .++++.+...|..|+..
T Consensus 31 ~~id~c~k~G~~~~A~~lf~~M~~~Gv-~pd~~tyn~Li~~c~~~~~~~~~~~~~~l~~A~~lf~~M~~~G~~Pd~~--- 106 (501)
T 4g26_A 31 QKLDMCSKKGDVLEALRLYDEARRNGV-QLSQYHYNVLLYVCSLAEAATESSPNPGLSRGFDIFKQMIVDKVVPNEA--- 106 (501)
T ss_dssp HHHHHTTTSCCHHHHHHHHHHHHHHTC-CCCHHHHHHHHHHHTTCCCCSSSSCCHHHHHHHHHHHHHHHTTCCCCHH---
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHcCC-CCCHhHHHHHHHHHHhCCchhhhhhcchHHHHHHHHHHHHHhCCCCCHH---
Confidence 347777899999999999887643332 234444556666654321 23444455444443321
Q ss_pred cCCCCcHHHHHHHcCCHHH----HHHHHHcCCCCcccCCCCchHHHHHHHcCCHH----HHHHHHHcCCCCCCCCCCCCc
Q 026440 78 DEEGWAPIHSAASIGNVTI----VEMLLSKGADVNLKNDGGRTALHYAASKGWLK----IVELLISRGAKINSKDKVGCT 149 (238)
Q Consensus 78 ~~~~~t~l~~a~~~~~~~~----~~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~----~~~~l~~~~~~~~~~~~~~~t 149 (238)
...+.+...+..|..+- ++.+.+.|..++... -.+.+...+..|..+ +++.+.+.|..++... ..+
T Consensus 107 --tyn~lI~~~~~~g~~~~A~~l~~~M~~~g~~Pd~~t--yn~lI~~~~~~g~~~~A~~l~~~M~~~G~~Pd~~t--y~~ 180 (501)
T 4g26_A 107 --TFTNGARLAVAKDDPEMAFDMVKQMKAFGIQPRLRS--YGPALFGFCRKGDADKAYEVDAHMVESEVVPEEPE--LAA 180 (501)
T ss_dssp --HHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHH--HHHHHHHHHHTTCHHHHHHHHHHHHHTTCCCCHHH--HHH
T ss_pred --HHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCccce--ehHHHHHHHHCCCHHHHHHHHHHHHhcCCCCCHHH--HHH
Confidence 22455667778888654 444455677766543 234455566777754 4555566777655321 234
Q ss_pred HHHHHHhhCCHHHHHHHHh----cCCCCC
Q 026440 150 ALHRGASTGNSALCELLIE----EGAEVD 174 (238)
Q Consensus 150 ~l~~a~~~~~~~~~~~Ll~----~~~~~~ 174 (238)
.+...+..|..+-+.-+++ .|..++
T Consensus 181 Li~~~~~~g~~d~A~~ll~~Mr~~g~~ps 209 (501)
T 4g26_A 181 LLKVSMDTKNADKVYKTLQRLRDLVRQVS 209 (501)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHTSSBC
T ss_pred HHHHHhhCCCHHHHHHHHHHHHHhCCCcC
Confidence 4566777788754444443 355554
No 116
>1gp8_A Protein (scaffolding protein); coat protein-binding domain, helix- loop-helix motif, viral protein; NMR {Enterobacteria phage P22} SCOP: j.58.1.1 PDB: 2gp8_A
Probab=74.49 E-value=3.3 Score=19.95 Aligned_cols=26 Identities=27% Similarity=0.365 Sum_probs=19.8
Q ss_pred hccChHHHHHHHcCChHHHHHHHHHH
Q 026440 8 TIKDKDLFKAAETGDSSTFKSLSKQQ 33 (238)
Q Consensus 8 ~~~~~~l~~a~~~g~~~~v~~l~~~~ 33 (238)
..-+..++.|+..|+++.++.|-.+.
T Consensus 11 ~aiEQqiyvA~seGd~etv~~Le~QL 36 (40)
T 1gp8_A 11 DAIRKQMDAAASKGDVETYRKLKAKL 36 (40)
T ss_dssp HHHHHHHHHHHTTSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHH
Confidence 33456788999999999999886553
No 117
>3gvo_A Pumilio 2, pumilio homolog 2; RNA-binding, PUF domain, RNA binding protein; HET: DTD; 1.60A {Mus musculus} SCOP: a.118.1.8 PDB: 3gvt_A 3q0q_A 3q0r_A 3q0s_A 1ib2_A 1m8w_A 1m8x_A 1m8y_A 1m8z_A 3q0l_A 3q0m_A 3q0n_A 3q0o_A 3q0p_A 2yjy_A 3bsx_A 3bsb_A 3h3d_X
Probab=73.99 E-value=4.3 Score=31.00 Aligned_cols=55 Identities=7% Similarity=0.015 Sum_probs=30.9
Q ss_pred hHHHHHHHcCChHHHHHHHHHHhhhhcC-CCCCCCchHHHHHHHcCCHHHHHHHHh
Q 026440 12 KDLFKAAETGDSSTFKSLSKQQLLKSLS-LRNDDDRTLLHVAASCGHPEVVEILLS 66 (238)
Q Consensus 12 ~~l~~a~~~g~~~~v~~l~~~~~~~~~~-~~~~~~~t~L~~A~~~~~~~~~~~Ll~ 66 (238)
.-|......++.+....+++...+.-.. ..|..|+..+.-....++.+....+++
T Consensus 39 R~lQ~~l~~~~~~~~~~i~~ei~~~~~~L~~d~~gn~vvQklle~~~~~~~~~i~~ 94 (351)
T 3gvo_A 39 RFIQQKLERATPAERQIVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLDQKLALAT 94 (351)
T ss_dssp HHHHHHHHHCCHHHHHHHHHHHGGGHHHHHTSTTHHHHHHHHHHHCCHHHHHHHHH
T ss_pred HHHHHHHhhCCHHHHHHHHHHHHHhHHHHHhChhhhHHHHHHHhhCCHHHHHHHHH
Confidence 3455556666666666666554322221 446666666666666666665555543
No 118
>3gvo_A Pumilio 2, pumilio homolog 2; RNA-binding, PUF domain, RNA binding protein; HET: DTD; 1.60A {Mus musculus} SCOP: a.118.1.8 PDB: 3gvt_A 3q0q_A 3q0r_A 3q0s_A 1ib2_A 1m8w_A 1m8x_A 1m8y_A 1m8z_A 3q0l_A 3q0m_A 3q0n_A 3q0o_A 3q0p_A 2yjy_A 3bsx_A 3bsb_A 3h3d_X
Probab=71.71 E-value=9.4 Score=29.11 Aligned_cols=193 Identities=10% Similarity=0.014 Sum_probs=104.5
Q ss_pred hhccChHHHHHHHcCChHHHHHHHHHHhhhhcC-CCCCCCchHHHHHHHcCCHHHHHHHHhhcccccccccccCCCCcHH
Q 026440 7 QTIKDKDLFKAAETGDSSTFKSLSKQQLLKSLS-LRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPI 85 (238)
Q Consensus 7 ~~~~~~~l~~a~~~g~~~~v~~l~~~~~~~~~~-~~~~~~~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~t~l 85 (238)
+..++.-+......++.+....+++...+.-.. ..+..|.-.+..+......+-...++..-......-..|.+|...+
T Consensus 70 d~~gn~vvQklle~~~~~~~~~i~~~i~g~~~~l~~~~~G~rvvQk~le~~~~~~~~~i~~el~~~~~~L~~d~~Gn~Vi 149 (351)
T 3gvo_A 70 DVFGNYVIQKFFEFGSLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQNGNHVV 149 (351)
T ss_dssp STTHHHHHHHHHHHCCHHHHHHHHHHHTTCHHHHHTSTTHHHHHHHHHHHSCHHHHHHHHGGGTTCHHHHHHSTTHHHHH
T ss_pred ChhhhHHHHHHHhhCCHHHHHHHHHHHHhhHHHHhhCHHhHHHHHHHHHhCCHHHHHHHHHHhhhhHHHHHHhhhhhHHH
Confidence 455566677777788888777777665322211 4467788888888887777655555532111111123455666666
Q ss_pred HHHHHcCCHHHHHHHHHcCCC---CcccCCCCchHHHHHHHcCCHHHHHHHHHc---CCCCCCCCCCCCcHHHHHHhhCC
Q 026440 86 HSAASIGNVTIVEMLLSKGAD---VNLKNDGGRTALHYAASKGWLKIVELLISR---GAKINSKDKVGCTALHRGASTGN 159 (238)
Q Consensus 86 ~~a~~~~~~~~~~~Ll~~~~~---~~~~~~~~~~~l~~a~~~~~~~~~~~l~~~---~~~~~~~~~~~~t~l~~a~~~~~ 159 (238)
..+...+..+..+.+++.-.. .-..+..|...+..++.....+-...+++. ....-..|.+|.-.+..+...+.
T Consensus 150 Qk~l~~~~~~~~~~i~~~~~~~~~~ls~~~~G~~Vvq~~le~~~~~~~~~ii~~l~~~~~~L~~d~~Gn~ViQ~~l~~~~ 229 (351)
T 3gvo_A 150 QKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGR 229 (351)
T ss_dssp HHHHHHSCGGGTHHHHHHTTTTHHHHHTSTTHHHHHHHHHHHSCHHHHHHHHHHHHTTHHHHHTSTTHHHHHHHHHHHSC
T ss_pred HHHHHhCCHHHHHHHHHHHHHHHHHHHhCcHhHHHHHHHHHHCCHHHHHHHHHHHhhhHHhcCCCchHHHHHHHHHHhCc
Confidence 666665555544555543111 001234555666666555544333323221 11111246667777777778877
Q ss_pred HHHHHHHHhcCC-CC--CccccCCCcHHHHHHHhCCHHHHHHH
Q 026440 160 SALCELLIEEGA-EV--DATDKAGQTPLMNAVICYNKEVALLL 199 (238)
Q Consensus 160 ~~~~~~Ll~~~~-~~--~~~~~~~~t~l~~a~~~~~~~~~~~L 199 (238)
++..+.+++.-. .+ -..+..|...+..+...+..+.-+.+
T Consensus 230 ~~~~~~i~~~l~~~~~~Ls~~k~gs~Vvek~l~~~~~~~r~~i 272 (351)
T 3gvo_A 230 PEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRAERALL 272 (351)
T ss_dssp HHHHHHHHHTTTTCHHHHHTSTTHHHHHHHHHHHSCHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHhCCHHHHHHH
Confidence 776666665411 11 12355666777777777776533333
No 119
>3k49_A MRNA-binding protein PUF3; PUF3, pumilio, RNA binding, mitochondrial mRNA,, membrane, mitochondrion; HET: CIT; 2.50A {Saccharomyces cerevisiae} SCOP: a.118.1.0 PDB: 3k4e_A
Probab=63.32 E-value=11 Score=28.86 Aligned_cols=26 Identities=15% Similarity=0.183 Sum_probs=15.2
Q ss_pred ccCCCcHHHHHHHhCCHHHHHHHHhc
Q 026440 177 DKAGQTPLMNAVICYNKEVALLLIRH 202 (238)
Q Consensus 177 ~~~~~t~l~~a~~~~~~~~~~~Ll~~ 202 (238)
+..|...+..+...+..+.-+.+++.
T Consensus 261 ~k~gS~Vvek~l~~~~~~~r~~ii~~ 286 (369)
T 3k49_A 261 HKFASNVVEKSILYGSKNQKDLIISK 286 (369)
T ss_dssp STTHHHHHHHHHHHSCHHHHHHHHTT
T ss_pred hhHhhHHHHHHHHhCCHHHHHHHHHH
Confidence 44455556666666666666655543
No 120
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=61.17 E-value=36 Score=23.14 Aligned_cols=130 Identities=11% Similarity=0.022 Sum_probs=62.2
Q ss_pred chHHHHHHHcCCHHHHHHHHhhcccccccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCchHHHHHHHcC
Q 026440 46 RTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKG 125 (238)
Q Consensus 46 ~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~l~~a~~~~ 125 (238)
.+-+..|+..|+.+.+--+...... .......=..|...|+.++.+...++--++. ..+......|
T Consensus 9 ~~rF~LAL~lg~l~~A~e~a~~l~~-------~~~Wk~Lg~~AL~~gn~~lAe~cy~~~~D~~-------~L~~Ly~~tg 74 (177)
T 3mkq_B 9 HIRFDLALEYGNLDAALDEAKKLND-------SITWERLIQEALAQGNASLAEMIYQTQHSFD-------KLSFLYLVTG 74 (177)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHCC-------HHHHHHHHHHHHHTTCHHHHHHHHHHTTCHH-------HHHHHHHHHT
T ss_pred HHHHHHHHhcCCHHHHHHHHHHhCC-------HHHHHHHHHHHHHcCChHHHHHHHHHhCCHH-------HHHHHHHHhC
Confidence 3446666666666666544432111 0111223345666667777666666532221 2333444456
Q ss_pred CHHHHHHHHHcCCCCCCCCCCCCcHHHHHHhhCCH-HHHHHHHhcCCCCCccccCCCcHHHHHHHhCCHHHHHHHHh
Q 026440 126 WLKIVELLISRGAKINSKDKVGCTALHRGASTGNS-ALCELLIEEGAEVDATDKAGQTPLMNAVICYNKEVALLLIR 201 (238)
Q Consensus 126 ~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~-~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~ 201 (238)
+.+.++.+.+... ........++.+...|+. ++++.|.+.|--+ -+...|..+|..++.+-+++
T Consensus 75 ~~e~L~kla~iA~----~~g~~n~af~~~l~lGdv~~~i~lL~~~~r~~--------eA~~~A~t~g~~~~a~~~~~ 139 (177)
T 3mkq_B 75 DVNKLSKMQNIAQ----TREDFGSMLLNTFYNNSTKERSSIFAEGGSLP--------LAYAVAKANGDEAAASAFLE 139 (177)
T ss_dssp CHHHHHHHHHHHH----HTTCHHHHHHHHHHHTCHHHHHHHHHHTTCHH--------HHHHHHHHTTCHHHHHHHHH
T ss_pred CHHHHHHHHHHHH----HCccHHHHHHHHHHcCCHHHHHHHHHHCCChH--------HHHHHHHHcCcHHHHHHHHH
Confidence 6555555433210 011122345556566664 4555555432211 24445556666776666654
No 121
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=49.56 E-value=58 Score=22.09 Aligned_cols=132 Identities=13% Similarity=0.070 Sum_probs=86.7
Q ss_pred ccChHHHHHHHcCChHHHHHHHHHHhhhhcCCCCCC-CchHHHHHHHcCCHHHHHHHHhhcccccccccccCCCCcHHHH
Q 026440 9 IKDKDLFKAAETGDSSTFKSLSKQQLLKSLSLRNDD-DRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHS 87 (238)
Q Consensus 9 ~~~~~l~~a~~~g~~~~v~~l~~~~~~~~~~~~~~~-~~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~t~l~~ 87 (238)
..++.+-.|+..|+++....+.+... +.. ....=..|...|+.++++.....-.+ .. ..+.+
T Consensus 7 D~~~rF~LAL~lg~l~~A~e~a~~l~-------~~~~Wk~Lg~~AL~~gn~~lAe~cy~~~~D--------~~--~L~~L 69 (177)
T 3mkq_B 7 DPHIRFDLALEYGNLDAALDEAKKLN-------DSITWERLIQEALAQGNASLAEMIYQTQHS--------FD--KLSFL 69 (177)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHC-------CHHHHHHHHHHHHHTTCHHHHHHHHHHTTC--------HH--HHHHH
T ss_pred ChHHHHHHHHhcCCHHHHHHHHHHhC-------CHHHHHHHHHHHHHcCChHHHHHHHHHhCC--------HH--HHHHH
Confidence 34567999999999999999977640 122 33445677889999999998764332 11 24555
Q ss_pred HHHcCCHHHHHHHHHcCCCCcccCCCCchHHHHHHHcCCH-HHHHHHHHcCCCCCCCCCCCCcHHHHHHhhCCHHHHHHH
Q 026440 88 AASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWL-KIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELL 166 (238)
Q Consensus 88 a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~-~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L 166 (238)
....|+.+-++.+-+.. .........++.+...|+. ++++.|.+.|- ..-+...|..+|..+..+-+
T Consensus 70 y~~tg~~e~L~kla~iA----~~~g~~n~af~~~l~lGdv~~~i~lL~~~~r--------~~eA~~~A~t~g~~~~a~~~ 137 (177)
T 3mkq_B 70 YLVTGDVNKLSKMQNIA----QTREDFGSMLLNTFYNNSTKERSSIFAEGGS--------LPLAYAVAKANGDEAAASAF 137 (177)
T ss_dssp HHHHTCHHHHHHHHHHH----HHTTCHHHHHHHHHHHTCHHHHHHHHHHTTC--------HHHHHHHHHHTTCHHHHHHH
T ss_pred HHHhCCHHHHHHHHHHH----HHCccHHHHHHHHHHcCCHHHHHHHHHHCCC--------hHHHHHHHHHcCcHHHHHHH
Confidence 66678887777665531 1122344567777788875 56667765432 11346678888998888888
Q ss_pred Hhc
Q 026440 167 IEE 169 (238)
Q Consensus 167 l~~ 169 (238)
++.
T Consensus 138 ~~~ 140 (177)
T 3mkq_B 138 LEQ 140 (177)
T ss_dssp HHH
T ss_pred HHH
Confidence 754
No 122
>3qil_A Clathrin heavy chain 1; clathrin trimerization domain, endocytosis, structural prote; 3.92A {Bos taurus}
Probab=34.66 E-value=17 Score=23.00 Aligned_cols=26 Identities=15% Similarity=0.141 Sum_probs=16.3
Q ss_pred hccChHHHHHHHcCChHHHHHHHHHH
Q 026440 8 TIKDKDLFKAAETGDSSTFKSLSKQQ 33 (238)
Q Consensus 8 ~~~~~~l~~a~~~g~~~~v~~l~~~~ 33 (238)
..-..++..|+.+++.++++.|++.+
T Consensus 33 kLykDAietAa~S~d~elaEeLL~yF 58 (125)
T 3qil_A 33 SLYKDAMQYASESKDTELAEELLQWF 58 (125)
T ss_dssp CCSSHHHHTTTSSCCSHHHHHHHHHH
T ss_pred ccHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 33444666666677777777666655
No 123
>3k49_A MRNA-binding protein PUF3; PUF3, pumilio, RNA binding, mitochondrial mRNA,, membrane, mitochondrion; HET: CIT; 2.50A {Saccharomyces cerevisiae} SCOP: a.118.1.0 PDB: 3k4e_A
Probab=26.83 E-value=71 Score=24.41 Aligned_cols=58 Identities=7% Similarity=-0.024 Sum_probs=36.2
Q ss_pred ccChHHHHHHHcCChHHHHHHHHHHhhhhcC-CCCCCCchHHHHHHHcCCHHHHHHHHh
Q 026440 9 IKDKDLFKAAETGDSSTFKSLSKQQLLKSLS-LRNDDDRTLLHVAASCGHPEVVEILLS 66 (238)
Q Consensus 9 ~~~~~l~~a~~~g~~~~v~~l~~~~~~~~~~-~~~~~~~t~L~~A~~~~~~~~~~~Ll~ 66 (238)
.+..-+..++..++.+....+++...+.-.. ..|..|+..+.-....+..+..+.+++
T Consensus 41 ~gsR~lQ~~l~~~~~~~~~~I~~el~~~~~~L~~d~~gn~vvQkll~~~~~~~~~~i~~ 99 (369)
T 3k49_A 41 HGSRFIQRELATSPASEKEVIFNEIRDDAIELSNDVFGNYVIQKFFEFGSKIQKNTLVD 99 (369)
T ss_dssp HHHHHHHHHHTTCCHHHHHHHHHHHGGGHHHHHHSTTTHHHHHHHHHHCCHHHHHHHHH
T ss_pred cchHHHHHHhccCCHHHHHHHHHHHHHHHHHHhhCcccccHHHHHHHhCCHHHHHHHHH
Confidence 3344567777777777777776664322222 446777777777777777666555554
No 124
>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens}
Probab=24.44 E-value=1.2e+02 Score=23.77 Aligned_cols=50 Identities=20% Similarity=0.241 Sum_probs=0.0
Q ss_pred HHHHcCChHHHHHHHHHHhhhhcCCCC-------------CCCchHHHHHHHcCCHHHHHHHHh
Q 026440 16 KAAETGDSSTFKSLSKQQLLKSLSLRN-------------DDDRTLLHVAASCGHPEVVEILLS 66 (238)
Q Consensus 16 ~a~~~g~~~~v~~l~~~~~~~~~~~~~-------------~~~~t~L~~A~~~~~~~~~~~Ll~ 66 (238)
..+-.|+...|+..+..+ ++...... ..|.|.+|+|++..+.+++..|+.
T Consensus 28 ~gv~e~~~~~ve~y~~~g-g~~~r~lt~~e~~lln~~~af~~g~tlvhlair~~r~~~l~~ll~ 90 (454)
T 3zrh_A 28 VGVVEGDLAAIEAYKSSG-GDIARQLTADEVRLLNRPSAFDVGYTLVHLAIRFQRQDMLAILLT 90 (454)
T ss_dssp HHHHHTCHHHHHHHHTTT-CCTTCCCCHHHHHHHCCTTTCCTTCCHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHcCChhHHHHHHhcC-CchhcccCHHHHHHhCCCcccccCchhhhhhhhhhhhhHHHHhhh
Done!