Query 026446
Match_columns 238
No_of_seqs 167 out of 685
Neff 5.3
Searched_HMMs 29240
Date Mon Mar 25 13:45:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026446.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/026446hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3cry_A Gamma-glutamyl cyclotra 99.9 3.2E-28 1.1E-32 206.3 7.8 140 1-159 15-162 (188)
2 2qik_A UPF0131 protein YKQA; N 99.9 4.5E-27 1.5E-31 211.1 10.6 137 2-164 127-274 (285)
3 2jqv_A AT3G28950, AIG2 protein 99.7 4.9E-18 1.7E-22 141.1 9.1 133 1-164 7-145 (165)
4 2g0q_A AT5G39720.1 protein; st 99.6 1.2E-15 4.2E-20 128.2 11.0 132 2-164 17-154 (173)
5 1xhs_A Hypothetical UPF0131 pr 98.6 2.2E-07 7.4E-12 73.6 8.6 88 3-119 1-95 (121)
6 1v30_A Hypothetical UPF0131 pr 98.6 1.2E-07 4.2E-12 75.5 7.1 89 1-119 6-100 (124)
7 3jud_A AIG2-like domain-contai 98.4 7.7E-07 2.6E-11 73.4 8.1 107 3-128 2-129 (153)
8 1vkb_A Hypothetical protein; g 98.2 4.2E-07 1.4E-11 75.4 1.5 99 2-119 13-131 (161)
9 2qik_A UPF0131 protein YKQA; N 97.8 0.00014 4.8E-09 64.8 10.3 93 1-119 1-101 (285)
10 3cry_A Gamma-glutamyl cyclotra 65.7 4.4 0.00015 33.1 3.3 30 147-189 133-162 (188)
11 4fp9_B Mterf domain-containing 20.3 1.6E+02 0.0054 26.4 5.8 47 131-190 90-136 (335)
No 1
>3cry_A Gamma-glutamyl cyclotransferase; enzyme, oxoproline; 1.70A {Homo sapiens} PDB: 2pn7_A 2rbh_A 2i5t_A* 2q53_A
Probab=99.95 E-value=3.2e-28 Score=206.31 Aligned_cols=140 Identities=15% Similarity=0.162 Sum_probs=116.8
Q ss_pred CccEEEEccccccCCCCCC-----CeeeeeEEeceEEEEEeecccCCCCCCCCceeeeEeeCCCCeEEEEEEEeeCCCcc
Q 026446 1 MVFWVFGYGSLVWNPGFEY-----DEKILGFIKDYRRVFDLACIDHRGTPQHPARTCTLEKSQETICWGVAYCVRGGPEK 75 (238)
Q Consensus 1 ~~~WVFGYGSLiW~p~f~~-----~e~~~a~l~Gy~RrF~~~S~~hRGTpe~PGrVltL~~~~gg~c~GvaYri~~~~~~ 75 (238)
+.+||||||||||++.|.. ....+|+|+||+|+|++.|.+| ++..+|.+++|++++|+.|||++|+|+.
T Consensus 15 ~~~~~FaYGSlm~~~~~~~~~~~~~~~~~a~l~gy~l~f~~~~~~~--~~~~~g~~~~lv~~~g~~V~G~ly~v~~---- 88 (188)
T 3cry_A 15 ESFLYFAYGSNLLTERIHLRNPSAAFFCVARLQDFKLDFGNSQGKT--SQTWHGGIATIFQSPGDEVWGVVWKMNK---- 88 (188)
T ss_dssp CEEEEEECSGGGSHHHHHHHCTTCEEEEEEEEEEEEEEEEEETTCC--CTTTSSCEEEEEEEEEEEEEEEEEEEEG----
T ss_pred CCEEEEEEccCCCHHHHHhhCCCCceEEEEEEcCEEEEECCCCCCC--cCCCCCeeEeEEeCCCCEEEEEEEEECH----
Confidence 3589999999999998764 2467999999999999998887 6777899999999889999999999995
Q ss_pred hHHHHHHHHHHhhc---CCCcceEEEEecCCCCCCceeEEEEEEEecCCCCCCCCCCCCCHHHHHHHHHhccCCCCCcHH
Q 026446 76 ERLAMEYLERRECE---YDSKTLVDFYREGEPSQPALTGVIVFTSTPDKVSNKYYLGPAPLEEMARQIATAVGPCGNNRD 152 (238)
Q Consensus 76 ~~e~l~~Ld~RE~~---~y~~~~v~v~~~~~~~~~~~~~alvYva~~~~~~np~y~G~~~~e~iA~~Ia~A~G~sG~N~E 152 (238)
+.++.||+||+. .|.+..|+|...++. ...|++|++++ .++ ..|.++++.+|+++.+.+|.+.|
T Consensus 89 --~~l~~LD~~Eg~~~g~Y~r~~v~V~~~~g~----~~~a~vYv~~~---~~~----~~ps~~Yl~~i~~g~~~~gl~~~ 155 (188)
T 3cry_A 89 --SNLNSLDEQQGVKSGMYVVIEVKVATQEGK----EITCRSYLMTN---YES----APPSPQYKKIICMGAKENGLPLE 155 (188)
T ss_dssp --GGHHHHHHHTTGGGTSCEEEEEEEEETTCC----EEEEEEEECSS---EEE----CCCCHHHHHHHHHHHHHTTCCHH
T ss_pred --HHHHHHHHHhCCCCCcEEEEEEEEEeCCCC----EEEEEEEEecC---CCC----CCChHHHHHHHHHHHHHhCcCHH
Confidence 468999999984 799999999876542 35799999987 442 45678888888888888888888
Q ss_pred HHHHHHH
Q 026446 153 YLFKLEK 159 (238)
Q Consensus 153 YL~~L~~ 159 (238)
|+.+|..
T Consensus 156 y~~~L~~ 162 (188)
T 3cry_A 156 YQEKLKA 162 (188)
T ss_dssp HHHHHHT
T ss_pred HHHHHhc
Confidence 8877653
No 2
>2qik_A UPF0131 protein YKQA; NESG, SR631, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; HET: CIT; 1.35A {Bacillus subtilis}
Probab=99.94 E-value=4.5e-27 Score=211.15 Aligned_cols=137 Identities=20% Similarity=0.245 Sum_probs=116.7
Q ss_pred ccEEEEccccccCCCCCCC-------ee-eeeEEeceEEEEEeecccCCCCCCCCceeeeEeeCCCCeEEEEEEEeeCCC
Q 026446 2 VFWVFGYGSLVWNPGFEYD-------EK-ILGFIKDYRRVFDLACIDHRGTPQHPARTCTLEKSQETICWGVAYCVRGGP 73 (238)
Q Consensus 2 ~~WVFGYGSLiW~p~f~~~-------e~-~~a~l~Gy~RrF~~~S~~hRGTpe~PGrVltL~~~~gg~c~GvaYri~~~~ 73 (238)
.+||||||||||++.|.+. +. .+|+|+||+|+|| .+.+| |.+++|+++ ++.|||++|+|+.
T Consensus 127 ~~~yFaYGSnm~~~~~~~~~~p~~~~~~~~~a~L~G~~l~F~-~~~~~-------~g~a~iv~~-g~~v~Gvly~i~~-- 195 (285)
T 2qik_A 127 PIYYFAYGSCMDNARFQKAGVDHYFQDPVGRAVLKGYTTRFT-LKRED-------GSRADMLED-GGTTEGVLYRIPY-- 195 (285)
T ss_dssp SEEEEECSGGGSSHHHHHHTCGGGSSCEEEEEEEETCEEEEE-EEETT-------EEEEEEECS-SCEEEEEEEEECG--
T ss_pred cEEEEEechhcCHhhcccccCCcccceEeEEEEEeCeEEEcC-cCCCC-------CeeeeEEEC-CCEEEEEEEEECH--
Confidence 5899999999999998862 32 5999999999999 66655 456799998 9999999999995
Q ss_pred cchHHHHHHHHHHhhc---CCCcceEEEEecCCCCCCceeEEEEEEEecCCCCCCCCCCCCCHHHHHHHHHhccCCCCCc
Q 026446 74 EKERLAMEYLERRECE---YDSKTLVDFYREGEPSQPALTGVIVFTSTPDKVSNKYYLGPAPLEEMARQIATAVGPCGNN 150 (238)
Q Consensus 74 ~~~~e~l~~Ld~RE~~---~y~~~~v~v~~~~~~~~~~~~~alvYva~~~~~~np~y~G~~~~e~iA~~Ia~A~G~sG~N 150 (238)
+.+++||.||+. .|.+.+|+|...++ ....|+|||+++ ++ .+..|.++++++|+++.+ +|.+
T Consensus 196 ----~~l~~LD~~Eg~~~g~Y~r~~v~v~~~~g----~~~~a~~Yv~~~---~~---~~~~Ps~~Yl~~i~~g~~-~g~~ 260 (285)
T 2qik_A 196 ----SALSYLYKREGVESLTYRPAFVDVEAGGR----HYKDCLTFLVLQ---KE---AEIAPPQHYQIEIERGAE-LYLS 260 (285)
T ss_dssp ----GGHHHHHHHTTTTTTSEEEEEEEEEETTE----EEEEEEEEEESS---CC---CCCCCCHHHHHHHHHHHH-HHSC
T ss_pred ----HHHHHHHHhhCCCCCceEEEEEEEEECCC----CEEEEEEEEecC---CC---CCCCCHHHHHHHHHHHHh-cCCC
Confidence 468999999983 59999999987653 135799999988 55 367788999999999999 9999
Q ss_pred HHHHHHHHHHHHHh
Q 026446 151 RDYLFKLEKAMFDI 164 (238)
Q Consensus 151 ~EYL~~L~~~L~~l 164 (238)
.||+.+|.+.++.+
T Consensus 261 ~~Y~~~l~~~~~~~ 274 (285)
T 2qik_A 261 PEFTEKLKRHMNSL 274 (285)
T ss_dssp HHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHhhh
Confidence 99999999999988
No 3
>2jqv_A AT3G28950, AIG2 protein-like; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Arabidopsis thaliana}
Probab=99.74 E-value=4.9e-18 Score=141.06 Aligned_cols=133 Identities=14% Similarity=0.105 Sum_probs=96.3
Q ss_pred CccEEEEccccccCCCCCC-----CeeeeeEEeceEEEEEeecccCCCCCCCCceeeeEeeCCCCeEEEEEEE-eeCCCc
Q 026446 1 MVFWVFGYGSLVWNPGFEY-----DEKILGFIKDYRRVFDLACIDHRGTPQHPARTCTLEKSQETICWGVAYC-VRGGPE 74 (238)
Q Consensus 1 ~~~WVFGYGSLiW~p~f~~-----~e~~~a~l~Gy~RrF~~~S~~hRGTpe~PGrVltL~~~~gg~c~GvaYr-i~~~~~ 74 (238)
|.+|||+||||||.+.+.+ ....+|+|+||+|.|+.. ...|++|. ++++.|+|++|+ |+.
T Consensus 7 ~~~~vFvYGSL~~~~~~~~~~~~~~~~~~a~l~Gy~~~~~~~-------~~yP~lv~----~~~~~V~G~v~~~v~~--- 72 (165)
T 2jqv_A 7 QSHNVFVYGSILEPAVAAVILDRTADTVPAVLHGYHRYKLKG-------LPYPCIVS----SDSGKVNGKVITGVSD--- 72 (165)
T ss_dssp SCEEEEESSTTSSHHHHHHHTSSCCEEEEEEEETCEECCCTT-------SSSCCEES----CCSSEEEEEEEEEECH---
T ss_pred CceEEEEEcCCCCchhhHHHhCCCCccceEEEeCeEEEecCC-------CCCCEEEE----CCCCEEEEEEEEeCCH---
Confidence 5689999999999998764 567899999999999743 25676554 578999999997 662
Q ss_pred chHHHHHHHHHHhhcCCCcceEEEEecCCCCCCceeEEEEEEEecCCCCCCCCCCCCCHHHHHHHHHhccCCCCCcHHHH
Q 026446 75 KERLAMEYLERRECEYDSKTLVDFYREGEPSQPALTGVIVFTSTPDKVSNKYYLGPAPLEEMARQIATAVGPCGNNRDYL 154 (238)
Q Consensus 75 ~~~e~l~~Ld~RE~~~y~~~~v~v~~~~~~~~~~~~~alvYva~~~~~~np~y~G~~~~e~iA~~Ia~A~G~sG~N~EYL 154 (238)
+.|+.||.||+..|.+..++|...++. ....|++|+.+++ .++--.|.-+.++..+. .-.+|+
T Consensus 73 ---~~l~~LD~~E~~~Y~R~~v~v~~~dg~---~~~~a~vYv~~~~--~~~i~~G~W~~~~~~~~---------~~~~~~ 135 (165)
T 2jqv_A 73 ---AELNNFDVIEGNDYERVTVEVVRMDNS---EKVKVETYVWVNK--DDPRMYGEWDFEEWRVV---------HAEKFV 135 (165)
T ss_dssp ---HHHHHHHHTTTTSEEEEEEEEEETTTT---EEEEEEEEEETTT--TSCCSCSCCCHHHHHHH---------HHHHHH
T ss_pred ---HHHHHHHHhccCCcEEEEEEEEECCCC---eEEEEEEEEECCC--cccccCCCcCHHHHHHH---------HHHHHH
Confidence 789999999998899999999876542 1246999999762 22333355555554333 125666
Q ss_pred HHHHHHHHHh
Q 026446 155 FKLEKAMFDI 164 (238)
Q Consensus 155 ~~L~~~L~~l 164 (238)
..+...+..+
T Consensus 136 ~~t~~~~~~~ 145 (165)
T 2jqv_A 136 ETFRKMLEWN 145 (165)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhc
Confidence 6665555554
No 4
>2g0q_A AT5G39720.1 protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, unknown function; NMR {Arabidopsis thaliana}
Probab=99.63 E-value=1.2e-15 Score=128.19 Aligned_cols=132 Identities=20% Similarity=0.236 Sum_probs=98.2
Q ss_pred ccEEEEccccccCCCCCC-----CeeeeeEEeceEEEEEeecccCCCCCCCCceeeeEeeCCCCeEEEEEEE-eeCCCcc
Q 026446 2 VFWVFGYGSLVWNPGFEY-----DEKILGFIKDYRRVFDLACIDHRGTPQHPARTCTLEKSQETICWGVAYC-VRGGPEK 75 (238)
Q Consensus 2 ~~WVFGYGSLiW~p~f~~-----~e~~~a~l~Gy~RrF~~~S~~hRGTpe~PGrVltL~~~~gg~c~GvaYr-i~~~~~~ 75 (238)
.+|||+||||||.+.+.. ....+|+|+||+| |+.. | ...|+ |++++++.|+|++|. |+.
T Consensus 17 ~~~vFvYGSL~~~~~~~~~l~~~~~~~~A~l~Gy~l-~~~~-----~-~~yP~----lv~~~g~~V~G~v~~~v~~---- 81 (173)
T 2g0q_A 17 LHNVFVYGSFQDPDVINVMLDRTPEIVSATLPGFQR-FRLK-----G-RLYPC----IVPSEKGEVHGKVLMGVTS---- 81 (173)
T ss_dssp SEEEEECSGGGCHHHHHHHTSSCCEEEEEEEETCEE-CCCC-----S-SSCCC----EECCTTCEEEEEEEEEECH----
T ss_pred CEEEEEEcCCCCCccCHHHhcCCCceeEEEEcCeEE-EeeC-----C-CeeeE----EEECCCCEEEEEEEEEcCH----
Confidence 589999999999996543 4557999999996 4331 1 23554 555678899999875 763
Q ss_pred hHHHHHHHHHHhhcCCCcceEEEEecCCCCCCceeEEEEEEEecCCCCCCCCCCCCCHHHHHHHHHhccCCCCCcHHHHH
Q 026446 76 ERLAMEYLERRECEYDSKTLVDFYREGEPSQPALTGVIVFTSTPDKVSNKYYLGPAPLEEMARQIATAVGPCGNNRDYLF 155 (238)
Q Consensus 76 ~~e~l~~Ld~RE~~~y~~~~v~v~~~~~~~~~~~~~alvYva~~~~~~np~y~G~~~~e~iA~~Ia~A~G~sG~N~EYL~ 155 (238)
+.++.||.+|...|.+..++|...++.. ...|++|+.+++ ..+++.+..+.++-.+.- ...|+.
T Consensus 82 --~~l~~LD~~Eg~~Y~R~~v~V~~~dg~~---~v~A~vYv~~~~--~~~~~~~~~~~~~W~~~~---------~~~~~~ 145 (173)
T 2g0q_A 82 --DELENLDAVEGNEYERVTVGIVREDNSE---KMAVKTYMWINK--ADPDMFGEWNFEEWKRLH---------KKKFIE 145 (173)
T ss_dssp --HHHHHHHHHHTTTEEEEEEEEEESSSSC---EEEEEEEEESCS--SCSSSCCCCHHHHHHHHH---------HHHHHH
T ss_pred --HHHHHHHHHhhcCCEEEEEEEEECCCCe---EEEEEEEEEcCc--cccccCCCcCHHHHHHHh---------HHHHHH
Confidence 7899999999989999899998765321 357999999872 235678888777665442 367888
Q ss_pred HHHHHHHHh
Q 026446 156 KLEKAMFDI 164 (238)
Q Consensus 156 ~L~~~L~~l 164 (238)
...+.++..
T Consensus 146 ~~~~~m~~~ 154 (173)
T 2g0q_A 146 TFKKIMECK 154 (173)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHhc
Confidence 888888877
No 5
>1xhs_A Hypothetical UPF0131 protein YTFP; structure, autostructure, northeast structural genomics consortium, NESG, protein structure initiative, PSI; NMR {Escherichia coli} SCOP: d.269.1.1
Probab=98.56 E-value=2.2e-07 Score=73.63 Aligned_cols=88 Identities=16% Similarity=0.147 Sum_probs=63.8
Q ss_pred cEEEEccccccCCCCCC-----CeeeeeEEeceEEEEEeecccCCCCCCCCceeeeEeeCCCCeEEEEEEEeeCCCcchH
Q 026446 3 FWVFGYGSLVWNPGFEY-----DEKILGFIKDYRRVFDLACIDHRGTPQHPARTCTLEKSQETICWGVAYCVRGGPEKER 77 (238)
Q Consensus 3 ~WVFGYGSLiW~p~f~~-----~e~~~a~l~Gy~RrF~~~S~~hRGTpe~PGrVltL~~~~gg~c~GvaYri~~~~~~~~ 77 (238)
+.||.|||||-...... .-..+|++.||++.+. | ..|+.+. .++ .|+|.+|+|+.
T Consensus 1 ~~vFvYGTL~~g~~~~~~l~~a~~~g~a~l~gy~L~~~-------g--~yP~lv~----~~g-~V~Gevy~v~~------ 60 (121)
T 1xhs_A 1 MRIFVYGSLRHKQGNSHWMTNAQLLGDFSIDNYQLYSL-------G--HYPGAVP----GNG-TVHGEVYRIDN------ 60 (121)
T ss_dssp CEEEECSCTTCCCTTTHHHHTCEEEEEEEEEEEEEEEC-------S--SSEEEEE----EEE-EEEEEEEECCH------
T ss_pred CEEEEECCCCCcccchhhcCCCcEEEEEEEeCcEEEEe-------c--CCCeEEe----cCC-EEEEEEEEeCH------
Confidence 36999999998665431 1224699999988755 1 3577664 234 99999999973
Q ss_pred HHHHHHHHHhh--cCCCcceEEEEecCCCCCCceeEEEEEEEec
Q 026446 78 LAMEYLERREC--EYDSKTLVDFYREGEPSQPALTGVIVFTSTP 119 (238)
Q Consensus 78 e~l~~Ld~RE~--~~y~~~~v~v~~~~~~~~~~~~~alvYva~~ 119 (238)
+.++.||.-|. ..|.+..+++ .+ ..|++|+.++
T Consensus 61 ~~l~~LD~~Eg~~~~Y~R~~v~~--~~-------g~a~vY~~~~ 95 (121)
T 1xhs_A 61 ATLAELDALRTRGGEYARQLIQT--PY-------GSAWMYVYQR 95 (121)
T ss_dssp HHHHHHHHHHSTTSCEEEEEEEE--TT-------EEEEEEEECS
T ss_pred HHHHHHHHhcCCCCCEEEEEEEc--CC-------CEEEEEEECC
Confidence 68999999997 5777776663 22 1589999876
No 6
>1v30_A Hypothetical UPF0131 protein PH0828; alpha+beta, structural genomics, unknown function; HET: NHE; 1.40A {Pyrococcus horikoshii} SCOP: d.269.1.1
Probab=98.56 E-value=1.2e-07 Score=75.50 Aligned_cols=89 Identities=12% Similarity=-0.001 Sum_probs=61.4
Q ss_pred CccEEEEccccccCCCCCC-----CeeeeeEEeceEEEEEeecccCCCCCCCCceeeeEeeCCCCeEEEEEEEeeCCCcc
Q 026446 1 MVFWVFGYGSLVWNPGFEY-----DEKILGFIKDYRRVFDLACIDHRGTPQHPARTCTLEKSQETICWGVAYCVRGGPEK 75 (238)
Q Consensus 1 ~~~WVFGYGSLiW~p~f~~-----~e~~~a~l~Gy~RrF~~~S~~hRGTpe~PGrVltL~~~~gg~c~GvaYri~~~~~~ 75 (238)
|.+.||.|||||-...... .-..+|.+.||++. . | . .|+.+. .+| .|+|.+|+|+.
T Consensus 6 ~~~~vFVYGTL~~g~~n~~~l~~a~~~g~a~l~gy~L~--~------g-~-yP~lv~----~~g-~V~Gev~~v~~---- 66 (124)
T 1v30_A 6 KSVRIAVYGTLRKGKPLHWYLKGAKFLGEDWIEGYQLY--F------E-Y-LPYAVK----GKG-KLKVEVYEVDK---- 66 (124)
T ss_dssp -CEEEEECSTTSTTSTTGGGGTTSEEEEEEEEEEEEEE--E------S-S-SEEEEE----EEE-EEEEEEEEECH----
T ss_pred CccEEEEECCCCCchHhHHhcCCCcEEEEEEEeeEEEE--E------C-C-CCEEEe----cCC-EEEEEEEEECH----
Confidence 5678999999998776431 11346889999877 2 2 1 677664 233 49999999984
Q ss_pred hHHHHHHHHHHh-hcCCCcceEEEEecCCCCCCceeEEEEEEEec
Q 026446 76 ERLAMEYLERRE-CEYDSKTLVDFYREGEPSQPALTGVIVFTSTP 119 (238)
Q Consensus 76 ~~e~l~~Ld~RE-~~~y~~~~v~v~~~~~~~~~~~~~alvYva~~ 119 (238)
+.++.||..| ...|.+..| ...++ .|++|+..+
T Consensus 67 --~~l~~LD~~E~~~~Y~R~~V--~~~~g-------~A~vY~~~~ 100 (124)
T 1v30_A 67 --ETFERINEIEIGTGYRLVEV--STKFG-------KAFLWEWGS 100 (124)
T ss_dssp --HHHHHHTTCGGGGGEEEEEE--CCTTS-------CEEEEEECS
T ss_pred --HHHHHhhhccCCCCeEEEEE--EcCCC-------EEEEEEeCC
Confidence 7899999999 556766543 22221 289999865
No 7
>3jud_A AIG2-like domain-containing protein 1; cyclotransferase, gamma-glutamylamine cyclotransferase, gamma-glutamyl-epsilon-lysine; 0.98A {Homo sapiens} SCOP: d.269.1.1 PDB: 3jub_A 3juc_A
Probab=98.40 E-value=7.7e-07 Score=73.38 Aligned_cols=107 Identities=15% Similarity=0.177 Sum_probs=67.1
Q ss_pred cEEEEccccccCCCCC-CCe---eeeeEEeceEEEEEeecccCCCCCCCCceee------eE--eeCCCCeEEEEEEEee
Q 026446 3 FWVFGYGSLVWNPGFE-YDE---KILGFIKDYRRVFDLACIDHRGTPQHPARTC------TL--EKSQETICWGVAYCVR 70 (238)
Q Consensus 3 ~WVFGYGSLiW~p~f~-~~e---~~~a~l~Gy~RrF~~~S~~hRGTpe~PGrVl------tL--~~~~gg~c~GvaYri~ 70 (238)
-.||-||+|+-.-.-+ +-. ...|.+.|-.+.. ...|+.++ .| .+..|+.|+|.+|+|+
T Consensus 2 ~~vFVYGTL~~G~~Nh~~l~~~~~~~A~~~G~~~t~----------~~Ypl~~~g~~~~P~l~~~p~~g~~V~G~ly~v~ 71 (153)
T 3jud_A 2 ALVFVYGTLKRGQPNHRVLRDGAHGSAAFRARGRTL----------EPYPLVIAGEHNIPWLLHLPGSGRLVEGEVYAVD 71 (153)
T ss_dssp EEEEECSTTSTTSTTGGGGTCGGGCCEEEEEEEEES----------SCBCEEEETTTTEEEEBSCTTSSBCCEEEEEEEC
T ss_pred CEEEEeCCCCCCCcChHHHhcCcCCCeEEEEEEEeC----------CCccEEEecCCCCceEEecCCCCCEEEEEEEEEC
Confidence 3699999999654322 211 1246666654321 12333332 12 2223568999999998
Q ss_pred CCCcchHHHHHHHHHHhh--cCCCcceEEEEecCC-------CCCCceeEEEEEEEecCCCCCCCCC
Q 026446 71 GGPEKERLAMEYLERREC--EYDSKTLVDFYREGE-------PSQPALTGVIVFTSTPDKVSNKYYL 128 (238)
Q Consensus 71 ~~~~~~~e~l~~Ld~RE~--~~y~~~~v~v~~~~~-------~~~~~~~~alvYva~~~~~~np~y~ 128 (238)
. +.|+.||+.|. ..|.+..++|...+. ......+.|++|+.+. -++.+.
T Consensus 72 ~------~~l~~LD~~Eg~~~~Y~R~~v~V~~~~~~~~~~~~~~~g~~v~A~vYv~~~---~~~~~~ 129 (153)
T 3jud_A 72 E------RMLRFLDDFQSCPALYQRTVLRVQLLEDRAPGAEEPPAPTAVQCFVYSRAT---FPPEWA 129 (153)
T ss_dssp H------HHHHHHHHHTTTTTSCEEEEEEEEEEC------CCSCCCCEEEEEEEEBCC---CCGGGG
T ss_pred H------HHHHHHHHhcCCCCceEEEEEEEEeeccccccccccCCCCEEEEEEEEcCC---CCcccc
Confidence 4 78999999998 588888898876521 0112245799999976 555554
No 8
>1vkb_A Hypothetical protein; gamma-glutamyl cyclotransferase-like fold, structural genomi center for structural genomics, JCSG, protein structure INI PSI; 1.90A {Mus musculus} SCOP: d.269.1.1 PDB: 2kl2_A
Probab=98.17 E-value=4.2e-07 Score=75.44 Aligned_cols=99 Identities=15% Similarity=0.169 Sum_probs=64.0
Q ss_pred ccEEEEccccccCC-CCCCCe-------ee--ee-EEeceEEEEEeecccCCCCCCCCceeeeEeeCCCCeEEEEEEEee
Q 026446 2 VFWVFGYGSLVWNP-GFEYDE-------KI--LG-FIKDYRRVFDLACIDHRGTPQHPARTCTLEKSQETICWGVAYCVR 70 (238)
Q Consensus 2 ~~WVFGYGSLiW~p-~f~~~e-------~~--~a-~l~Gy~RrF~~~S~~hRGTpe~PGrVltL~~~~gg~c~GvaYri~ 70 (238)
+..||-||+|+=.- ...+-. +. .+ ++.||.-.|.-. ...| .+++++.+|..|+|.+|+|+
T Consensus 13 ~~~vFVYGTLk~G~~Nh~~l~~~r~~~A~~~G~~~tl~~YpL~~~g~-------~~~p--~~~i~p~~g~~V~Gevy~v~ 83 (161)
T 1vkb_A 13 MAHIFVYGTLKRGQPNHKVMLDHSHGLAAFRGRGCTVESFPLVIAGE-------HNIP--WLLYLPGKGHCVTGEIYEVD 83 (161)
T ss_dssp CEEEEECSTTSTTSTTTHHHHCGGGCCEEEEEEEEESSCBCEEEETT-------TTEE--EEESCTTSSBCCEEEEEEEC
T ss_pred ceEEEEcCCCCCCCcChHHHhhCcCCCceEEEEEeecCCceEEEecC-------CCcc--eeEeecCCCCEEEEEEEEEC
Confidence 35799999998322 111111 11 22 355666655521 1122 26666766779999999999
Q ss_pred CCCcchHHHHHHHHHHhh--cCCCcceEEEEe-------cCCCCCCceeEEEEEEEec
Q 026446 71 GGPEKERLAMEYLERREC--EYDSKTLVDFYR-------EGEPSQPALTGVIVFTSTP 119 (238)
Q Consensus 71 ~~~~~~~e~l~~Ld~RE~--~~y~~~~v~v~~-------~~~~~~~~~~~alvYva~~ 119 (238)
. +.|+.||.-|. +.|.+..++|.. .++ ....|++|+.+.
T Consensus 84 ~------~~L~~LD~~Eg~p~~Y~R~~v~V~~~~~~~~~~~g----~~v~A~vYv~~~ 131 (161)
T 1vkb_A 84 E------QMLRFLDDFEDCPSMYQRTALQVQVLEWEGDGDPG----DSVQCFVYTTAT 131 (161)
T ss_dssp H------HHHHHHHHHTTTTTSCEEEEEEEEEEEEC----CC----SEEEEEEEEESC
T ss_pred H------HHHHHHHHhcCCCCceEEEEEEEEecccccccCCC----CEEEEEEEEcCC
Confidence 4 68999999997 578888888865 222 135799999865
No 9
>2qik_A UPF0131 protein YKQA; NESG, SR631, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; HET: CIT; 1.35A {Bacillus subtilis}
Probab=97.76 E-value=0.00014 Score=64.77 Aligned_cols=93 Identities=15% Similarity=0.157 Sum_probs=62.8
Q ss_pred CccEEEEccccccCCCCCC----Ce--eeeeEEeceEEEEEeecccCCCCCCCCceeeeEeeCCCCeEEEEEEEeeCCCc
Q 026446 1 MVFWVFGYGSLVWNPGFEY----DE--KILGFIKDYRRVFDLACIDHRGTPQHPARTCTLEKSQETICWGVAYCVRGGPE 74 (238)
Q Consensus 1 ~~~WVFGYGSLiW~p~f~~----~e--~~~a~l~Gy~RrF~~~S~~hRGTpe~PGrVltL~~~~gg~c~GvaYri~~~~~ 74 (238)
|...||-||||+=...... .. ..+|+++| |-|..+ ..||++. .+..++.|.|-+|+|+.
T Consensus 1 m~~~vFVYGTL~~g~~n~~~l~~~~~~~~~~~~~g--~L~~~g--------~~P~lv~--~~~~~~~V~Gev~~v~~--- 65 (285)
T 2qik_A 1 MNSLLFVYGTLRKHEKNHHLLAQSACINEQARTKG--SLFAAK--------EGPTVVF--NDEDEGYIYGEVYEADE--- 65 (285)
T ss_dssp CCEEEEECSTTSTTSTTGGGGTTCEEEEEEEEEES--EEEEC----------CEEEEC--CTTCCSEEEEEEEEECH---
T ss_pred CCcEEEEECCCCCCCcChHHhCCCeEeeeeEEEEE--EEEEcC--------CCCeEEE--ccCCCCEEEEEEEEcCH---
Confidence 7789999999996554321 11 23677875 444222 1377663 22247899999999983
Q ss_pred chHHHHHHHHHHhh--cCCCcceEEEEecCCCCCCceeEEEEEEEec
Q 026446 75 KERLAMEYLERREC--EYDSKTLVDFYREGEPSQPALTGVIVFTSTP 119 (238)
Q Consensus 75 ~~~e~l~~Ld~RE~--~~y~~~~v~v~~~~~~~~~~~~~alvYva~~ 119 (238)
+ .||.-|. ..|.|..++|...++ ...|++|+.++
T Consensus 66 ---~---~LD~~E~~~~~Y~R~~v~v~~~~g-----~~~a~vY~~~~ 101 (285)
T 2qik_A 66 ---L---CIHKLDQFFQGYHKQTVFVETDVG-----IKIALIYFMNK 101 (285)
T ss_dssp ---H---HHHHHHHHSTTCEEEEEEEEETTE-----EEEEEEEECC-
T ss_pred ---H---HhHHhcCCCCceeEEEEEEEcCCC-----EEEEEEEEecc
Confidence 2 7888887 678888888887653 14799999876
No 10
>3cry_A Gamma-glutamyl cyclotransferase; enzyme, oxoproline; 1.70A {Homo sapiens} PDB: 2pn7_A 2rbh_A 2i5t_A* 2q53_A
Probab=65.69 E-value=4.4 Score=33.15 Aligned_cols=30 Identities=13% Similarity=0.053 Sum_probs=27.8
Q ss_pred CCCcHHHHHHHHHHHHHhHhhhccCcCCCCCCCCChhHHHHHH
Q 026446 147 CGNNRDYLFKLEKAMFDIEINLGFNLGLCLTGHEDDYIIELAN 189 (238)
Q Consensus 147 sG~N~EYL~~L~~~L~~l~~~~~~~~~~~~pgi~D~~l~~L~~ 189 (238)
..|+.+||..+++++++. |+.++|+..|++
T Consensus 133 ~~ps~~Yl~~i~~g~~~~-------------gl~~~y~~~L~~ 162 (188)
T 3cry_A 133 APPSPQYKKIICMGAKEN-------------GLPLEYQEKLKA 162 (188)
T ss_dssp CCCCHHHHHHHHHHHHHT-------------TCCHHHHHHHHT
T ss_pred CCChHHHHHHHHHHHHHh-------------CcCHHHHHHHhc
Confidence 579999999999999999 999999998875
No 11
>4fp9_B Mterf domain-containing protein 2; modification enzyme, transferase; HET: SAM; 2.90A {Homo sapiens}
Probab=20.31 E-value=1.6e+02 Score=26.42 Aligned_cols=47 Identities=6% Similarity=-0.094 Sum_probs=41.1
Q ss_pred CCHHHHHHHHHhccCCCCCcHHHHHHHHHHHHHhHhhhccCcCCCCCCCCChhHHHHHHH
Q 026446 131 APLEEMARQIATAVGPCGNNRDYLFKLEKAMFDIEINLGFNLGLCLTGHEDDYIIELANE 190 (238)
Q Consensus 131 ~~~e~iA~~Ia~A~G~sG~N~EYL~~L~~~L~~l~~~~~~~~~~~~pgi~D~~l~~L~~~ 190 (238)
.+.++++++|.++--..+.+.+-|....+.|+.+ |+.+..+..|..+
T Consensus 90 ls~e~V~kiL~k~P~lL~~s~e~L~~~l~fL~~l-------------Gl~~~~i~~ll~~ 136 (335)
T 4fp9_B 90 LNPEPVCVVLKKSPQLLKLPIMQMRKRSSYLQKL-------------GLGEGKLKRVLYC 136 (335)
T ss_dssp CCHHHHHHHHHHCGGGGGSCHHHHHHHHHHHHHT-------------TCTTTTHHHHHHH
T ss_pred CCHHHHHHHHHhChhhccCCHHHHHHHHHHHHHc-------------CCCHHHHHHHHHh
Confidence 6899999999999999999999999999999999 7777777666543
Done!