Query 026451
Match_columns 238
No_of_seqs 195 out of 1327
Neff 5.6
Searched_HMMs 29240
Date Mon Mar 25 13:52:36 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026451.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/026451hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3gla_A Low molecular weight he 99.9 3.9E-23 1.3E-27 158.1 12.6 88 23-111 2-99 (100)
2 4fei_A Heat shock protein-rela 99.9 6.2E-23 2.1E-27 158.2 13.1 90 22-112 3-97 (102)
3 3l1e_A Alpha-crystallin A chai 99.9 6.6E-22 2.3E-26 154.0 15.0 97 26-123 3-104 (106)
4 2wj5_A Heat shock protein beta 99.9 1.2E-21 4.2E-26 151.1 11.7 87 27-114 3-93 (101)
5 3q9p_A Heat shock protein beta 99.9 3.6E-21 1.2E-25 144.2 10.9 79 30-109 2-84 (85)
6 1gme_A Heat shock protein 16.9 99.8 1.1E-20 3.8E-25 155.5 11.1 91 22-112 40-140 (151)
7 4eld_A MJ16.5-P1, small heat s 99.8 2.1E-20 7.1E-25 154.9 12.7 88 23-112 55-153 (161)
8 3aab_A Putative uncharacterize 99.8 1.6E-20 5.6E-25 149.0 10.8 88 23-111 22-117 (123)
9 2y1y_A Alpha-crystallin B chai 99.8 4E-20 1.4E-24 139.6 11.4 82 31-113 2-87 (90)
10 2klr_A Alpha-crystallin B chai 99.8 8E-20 2.7E-24 154.3 10.7 96 27-126 65-164 (175)
11 2bol_A TSP36, small heat shock 99.8 1.5E-18 5.3E-23 158.4 11.4 89 23-112 96-191 (314)
12 2bol_A TSP36, small heat shock 99.7 1.4E-16 4.7E-21 145.5 8.2 83 26-109 221-313 (314)
13 1rl1_A Suppressor of G2 allele 98.9 2.7E-09 9.2E-14 82.7 8.2 83 23-111 7-89 (114)
14 2xcm_C SGT1-like protein, cyto 98.9 3.8E-09 1.3E-13 78.4 7.1 81 25-111 2-82 (92)
15 2k8q_A Protein SHQ1; beta-sand 98.0 1.1E-05 3.8E-10 65.2 6.2 79 24-113 2-85 (134)
16 3eud_A Protein SHQ1; CS domain 98.0 9E-05 3.1E-09 58.3 11.0 80 23-113 15-99 (115)
17 1x5m_A Calcyclin-binding prote 97.9 0.00015 5.1E-09 57.2 11.7 86 20-111 15-104 (127)
18 1wh0_A Ubiquitin carboxyl-term 97.7 0.00017 5.7E-09 58.0 9.0 98 13-111 7-112 (134)
19 1wgv_A KIAA1068 protein; CS do 97.5 0.0016 5.4E-08 51.0 11.5 82 23-110 17-101 (124)
20 2o30_A Nuclear movement protei 97.4 0.00093 3.2E-08 52.9 9.6 75 25-109 4-79 (131)
21 3qor_A Nuclear migration prote 97.4 0.0011 3.8E-08 51.9 9.8 81 22-111 13-97 (121)
22 2rh0_A NUDC domain-containing 97.3 0.0013 4.5E-08 53.9 9.8 82 20-111 8-91 (157)
23 1ejf_A Progesterone receptor P 97.3 0.00094 3.2E-08 52.5 8.4 79 26-111 4-82 (125)
24 1wfi_A Nuclear distribution ge 97.3 0.00058 2E-08 54.0 6.8 79 24-111 6-88 (131)
25 3igf_A ALL4481 protein; two-do 97.1 0.001 3.5E-08 61.5 7.6 70 26-108 298-368 (374)
26 2cg9_X CO-chaperone protein SB 96.7 0.00079 2.7E-08 53.7 2.7 84 24-110 5-97 (134)
27 2kmw_A Uncharacterized protein 96.5 0.0045 1.5E-07 50.4 6.4 80 24-111 3-82 (150)
28 3q9p_A Heat shock protein beta 73.3 6.5 0.00022 28.0 5.3 33 77-110 8-40 (85)
29 2y1y_A Alpha-crystallin B chai 71.6 6.3 0.00022 28.3 4.9 32 77-109 7-38 (90)
30 3gla_A Low molecular weight he 69.8 8.3 0.00028 27.9 5.3 34 77-111 15-48 (100)
31 2wj5_A Heat shock protein beta 69.7 6.4 0.00022 29.0 4.7 32 77-109 12-43 (101)
32 4fei_A Heat shock protein-rela 68.7 7.3 0.00025 28.6 4.8 32 77-109 17-48 (102)
33 3l1e_A Alpha-crystallin A chai 67.9 8 0.00027 28.8 4.9 32 77-109 13-44 (106)
34 3aab_A Putative uncharacterize 59.7 18 0.00063 27.2 5.7 34 77-111 35-69 (123)
35 2cql_A OK/SW-CL.103, 60S ribos 57.8 14 0.00047 27.7 4.6 46 48-109 20-69 (100)
36 1rl6_A Protein (ribosomal prot 51.9 25 0.00086 29.0 5.6 46 48-109 11-56 (177)
37 1nkw_E 50S ribosomal protein L 51.7 29 0.001 29.5 6.1 46 48-109 39-84 (212)
38 4eld_A MJ16.5-P1, small heat s 49.3 42 0.0014 26.5 6.5 34 77-111 67-100 (161)
39 2klr_A Alpha-crystallin B chai 48.8 19 0.00066 29.4 4.4 32 77-109 74-105 (175)
40 1gme_A Heat shock protein 16.9 47.4 32 0.0011 27.1 5.4 34 77-111 54-88 (151)
41 1vq8_E 50S ribosomal protein L 46.6 32 0.0011 28.4 5.4 47 48-109 9-55 (178)
42 3j21_F 50S ribosomal protein L 42.5 25 0.00087 29.1 4.2 45 48-107 14-58 (184)
43 2j5d_A BNIP3 TM, BCL2/adenovir 41.3 12 0.00043 24.3 1.7 21 210-230 23-43 (45)
44 2jwa_A Receptor tyrosine-prote 39.7 15 0.0005 23.9 1.8 22 210-231 20-41 (44)
45 3v2d_H 50S ribosomal protein L 36.6 43 0.0015 27.6 4.7 44 48-107 12-55 (180)
46 3iz5_F 60S ribosomal protein L 34.0 66 0.0023 26.7 5.5 46 48-108 13-60 (190)
47 3u5e_H L8, RP24, YL11, 60S rib 32.0 78 0.0027 26.3 5.6 46 48-108 13-59 (191)
48 3arc_L Photosystem II reaction 31.3 28 0.00097 21.6 2.0 16 214-229 20-35 (37)
49 2zkr_e 60S ribosomal protein L 28.6 61 0.0021 26.9 4.4 53 42-109 7-62 (192)
50 1zo0_A ODC-AZ, ornithine decar 28.4 1.4E+02 0.0048 23.3 6.2 55 57-114 4-58 (126)
51 2ks1_B Epidermal growth factor 27.4 31 0.001 22.2 1.8 20 210-229 20-39 (44)
52 3oeq_A Frataxin homolog, mitoc 26.9 46 0.0016 25.9 3.1 17 93-109 49-65 (123)
53 1ew4_A CYAY protein; friedreic 26.8 36 0.0012 25.7 2.4 18 92-109 29-46 (106)
54 2o30_A Nuclear movement protei 22.7 99 0.0034 23.4 4.4 30 77-106 15-44 (131)
55 3bbo_I Ribosomal protein L6; l 22.3 22 0.00076 30.5 0.5 48 47-109 53-100 (223)
56 1iij_A ERBB-2 receptor protein 22.1 14 0.00047 22.9 -0.6 18 210-227 16-33 (35)
57 2ks0_A Uncharacterized protein 21.6 40 0.0014 23.8 1.6 25 42-67 14-38 (71)
58 2l2t_A Receptor tyrosine-prote 21.5 46 0.0016 21.4 1.8 20 210-229 19-38 (44)
59 1n91_A ORF, hypothetical prote 20.2 1.5E+02 0.005 22.4 4.7 39 30-70 8-47 (108)
No 1
>3gla_A Low molecular weight heat shock protein; HSPA, SHP, SHSP, high resolution, stress response, chaperone; 1.64A {Xanthomonas axonopodis PV} PDB: 3gt6_A 3guf_A
Probab=99.90 E-value=3.9e-23 Score=158.05 Aligned_cols=88 Identities=30% Similarity=0.522 Sum_probs=78.8
Q ss_pred ccccceeEEEcCCeEEEEEEcCCCCCCCeEEEEEeCCeEEEEEEEeeec----ce------EeeEEEEEEECCCCCccCC
Q 026451 23 EFVPSSGWTEDSNGHYLLVDLPDFKKEQVKLQVDSSGNITVSGEMLTSD----NR------YIMRFEQMFPLPPNSDMDK 92 (238)
Q Consensus 23 ~~~P~~di~e~~d~~~l~vdLPGf~~edI~V~V~~~~~L~I~Ger~~~e----~~------~~r~F~r~~~LP~~vD~~~ 92 (238)
.|.|++||+++++.|+|.++||||++++|+|++. ++.|+|+|++.... .. ..+.|.|+|.||.++|.++
T Consensus 2 ~~~P~~di~e~~~~~~v~~~lPG~~~edi~v~~~-~~~L~I~g~~~~~~~~~~~~~~~~er~~g~f~r~~~LP~~vd~~~ 80 (100)
T 3gla_A 2 QWVPRVDIKEEVNHFVLYADLPGIDPSQIEVQMD-KGILSIRGERKSESSTETERFSRIERRYGSFHRRFALPDSADADG 80 (100)
T ss_dssp CSCCCEEEEECSSEEEEEEECTTSCGGGCEEEEE-TTEEEEEEEECCGGGSSGGGEEEECCCCEEEEEEEECCTTBCTTS
T ss_pred CccCcEEEEECCCEEEEEEECCCCCHHHEEEEEE-CCEEEEEEEEcCcCccCCccEEEEeecceEEEEEEECCCCcChHH
Confidence 5899999999999999999999999999999999 99999999987541 11 2358999999999999999
Q ss_pred eeEEEeCCEEEEEEeCcCC
Q 026451 93 ISGKFDGELLYVTVPKRAK 111 (238)
Q Consensus 93 I~A~~~dGvL~ItlPK~~~ 111 (238)
|+|+|+||+|+|++||.+.
T Consensus 81 i~A~~~~GvL~I~~pK~~~ 99 (100)
T 3gla_A 81 ITAAGRNGVLEIRIPKRPA 99 (100)
T ss_dssp CEEEEETTEEEEEEEBC--
T ss_pred eEEEEeCCEEEEEEecCCC
Confidence 9999999999999999854
No 2
>4fei_A Heat shock protein-related protein; stress response, alpha-crystallin domain fold, aggregates, C chaperone; 2.40A {Deinococcus radiodurans}
Probab=99.89 E-value=6.2e-23 Score=158.23 Aligned_cols=90 Identities=24% Similarity=0.388 Sum_probs=81.4
Q ss_pred cccccceeEEEcCCeEEEEEEcCCCCCCCeEEEEEeCCeEEEEEEEeeec-----ceEeeEEEEEEECCCCCccCCeeEE
Q 026451 22 KEFVPSSGWTEDSNGHYLLVDLPDFKKEQVKLQVDSSGNITVSGEMLTSD-----NRYIMRFEQMFPLPPNSDMDKISGK 96 (238)
Q Consensus 22 ~~~~P~~di~e~~d~~~l~vdLPGf~~edI~V~V~~~~~L~I~Ger~~~e-----~~~~r~F~r~~~LP~~vD~~~I~A~ 96 (238)
..|.|++||+++++.|+|.++||||++++|+|++. ++.|+|+|++..+. .+..+.|.|+|.||.++|.++|+|+
T Consensus 3 g~~~P~~di~e~~~~~~v~~~lPG~~~edi~v~~~-~~~L~I~g~~~~~~~~~~~er~~g~f~R~~~LP~~vd~~~i~A~ 81 (102)
T 4fei_A 3 GPWTPAADWRDAGTHLDLLLDVPGVDAGTLALAED-GGQLTVSGERPGTEHLLRSERPSGRFVRELAFPEPVRPASGVAS 81 (102)
T ss_dssp EECCCCEEEEEETTEEEEEEECTTCCGGGCEEEEE-TTEEEEEEEECCCSSCSSCCSEEEEEEEEEECSSCBCTTCCEEE
T ss_pred CcccCcEEEEEcCCEEEEEEECCCCchHhEEEEEE-CCEEEEEEEEecCCCEEEEEEeccEEEEEEECCCCcchhHcEEE
Confidence 46899999999999999999999999999999999 99999999986542 2234699999999999999999999
Q ss_pred EeCCEEEEEEeCcCCc
Q 026451 97 FDGELLYVTVPKRAKE 112 (238)
Q Consensus 97 ~~dGvL~ItlPK~~~~ 112 (238)
|+||+|+|++||..+.
T Consensus 82 ~~~GvL~I~lpK~~~~ 97 (102)
T 4fei_A 82 LAGGVLTVRFEKLRPT 97 (102)
T ss_dssp EETTEEEEEEEBSSCC
T ss_pred EECCEEEEEEEccCcc
Confidence 9999999999998653
No 3
>3l1e_A Alpha-crystallin A chain; lens transparency, polydispersity, protein aggregation, CRYS eye lens protein, chaperone; 1.15A {Bos taurus} PDB: 3l1f_A 3n3e_A
Probab=99.88 E-value=6.6e-22 Score=153.96 Aligned_cols=97 Identities=16% Similarity=0.254 Sum_probs=81.8
Q ss_pred cceeEEEcCCeEEEEEEcCCCCCCCeEEEEEeCCeEEEEEEEeee---cceEeeEEEEEEECCCCCccCCeeEEE-eCCE
Q 026451 26 PSSGWTEDSNGHYLLVDLPDFKKEQVKLQVDSSGNITVSGEMLTS---DNRYIMRFEQMFPLPPNSDMDKISGKF-DGEL 101 (238)
Q Consensus 26 P~~di~e~~d~~~l~vdLPGf~~edI~V~V~~~~~L~I~Ger~~~---e~~~~r~F~r~~~LP~~vD~~~I~A~~-~dGv 101 (238)
+..||+++++.|.|.++||||++++|+|++. ++.|+|+|++... .+.+.+.|.|+|.||.++|.++|+|+| .||+
T Consensus 3 g~~~i~e~~~~~~v~~dlPG~~~edi~V~v~-~~~L~I~g~~~~~~~~~~~~~~eF~R~~~LP~~vd~~~i~A~~s~~Gv 81 (106)
T 3l1e_A 3 GISEVRSDRDKFVIFLDVKHFSPEDLTVKVQ-EDFVEIHGKHNERQDDHGYISREFHRRYRLPSNVDQSALSCSLSADGM 81 (106)
T ss_dssp CSEEEEECSSEEEEEEECTTSCGGGEEEEEE-TTEEEEEEEEEEEETTTEEEEEEEEEEEECCTTBCTTSCEEEECTTSE
T ss_pred CceEEEEcCCEEEEEEECCCCChHHEEEEEE-CCEEEEEEEEccccCCCCEEEEEEEEEEECCCCcChhHcEEEECCCCE
Confidence 4589999999999999999999999999999 9999999987543 233446899999999999999999999 7999
Q ss_pred EEEEEeCcCCcc-CCCCCCCCcC
Q 026451 102 LYVTVPKRAKEE-STEQPSLPAS 123 (238)
Q Consensus 102 L~ItlPK~~~~~-~~~~p~~~~~ 123 (238)
|+|++||..+.. ...+++.+++
T Consensus 82 L~I~~PK~~~~~~~~~~~r~I~I 104 (106)
T 3l1e_A 82 LTFSGPKIPSGVDAGHSERAIPV 104 (106)
T ss_dssp EEEEEEBCCCCTTTTSSSCCCCC
T ss_pred EEEEEEccCcccccCCCCeEeee
Confidence 999999997753 2234455543
No 4
>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress response; 1.12A {Rattus norvegicus}
Probab=99.86 E-value=1.2e-21 Score=151.12 Aligned_cols=87 Identities=16% Similarity=0.294 Sum_probs=77.3
Q ss_pred ceeEEEcCCeEEEEEEcCCCCCCCeEEEEEeCCeEEEEEEEeee--c-ceEeeEEEEEEECCCCCccCCeeEEE-eCCEE
Q 026451 27 SSGWTEDSNGHYLLVDLPDFKKEQVKLQVDSSGNITVSGEMLTS--D-NRYIMRFEQMFPLPPNSDMDKISGKF-DGELL 102 (238)
Q Consensus 27 ~~di~e~~d~~~l~vdLPGf~~edI~V~V~~~~~L~I~Ger~~~--e-~~~~r~F~r~~~LP~~vD~~~I~A~~-~dGvL 102 (238)
.+||+++++.|.|.++||||++++|+|++. ++.|+|+|++... + +.+.+.|.|+|.||.++|.++|+|+| .||+|
T Consensus 3 ~vdi~e~~~~~~v~~dlPG~~~edI~V~v~-~~~L~I~g~~~~~~~~~~~~~~eF~R~~~LP~~vd~~~i~A~~s~nGvL 81 (101)
T 2wj5_A 3 MAQVPTDPGYFSVLLDVKHFSPEEISVKVV-GDHVEVHARHEERPDEHGFIAREFHRRYRLPPGVDPAAVTSALSPEGVL 81 (101)
T ss_dssp CCCCCCCSSCEEEEEECTTSCGGGEEEEEE-TTEEEEEEEEEECSSTTCCEEEEEEEEEECCTTBCTTCCEEEECTTSEE
T ss_pred cEEEEEeCCEEEEEEECCCCcHHHeEEEEE-CCEEEEEEEEecccCCCCEEEEEEEEEEECCCCcChhHCEEEECCCCEE
Confidence 579999999999999999999999999999 9999999998753 1 23345799999999999999999999 79999
Q ss_pred EEEEeCcCCccC
Q 026451 103 YVTVPKRAKEES 114 (238)
Q Consensus 103 ~ItlPK~~~~~~ 114 (238)
+|++||....++
T Consensus 82 ~I~lPK~~~~~~ 93 (101)
T 2wj5_A 82 SIQATPASAQAS 93 (101)
T ss_dssp EEEECBCCCCCS
T ss_pred EEEEECCCcCCC
Confidence 999999865443
No 5
>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A
Probab=99.85 E-value=3.6e-21 Score=144.16 Aligned_cols=79 Identities=16% Similarity=0.351 Sum_probs=69.6
Q ss_pred EEEcCCeEEEEEEcCCCCCCCeEEEEEeCCeEEEEEEEeee---cceEeeEEEEEEECCCCCccCCeeEEEe-CCEEEEE
Q 026451 30 WTEDSNGHYLLVDLPDFKKEQVKLQVDSSGNITVSGEMLTS---DNRYIMRFEQMFPLPPNSDMDKISGKFD-GELLYVT 105 (238)
Q Consensus 30 i~e~~d~~~l~vdLPGf~~edI~V~V~~~~~L~I~Ger~~~---e~~~~r~F~r~~~LP~~vD~~~I~A~~~-dGvL~It 105 (238)
+.|+++.|.|.++||||++++|+|++. ++.|+|+|++... .+...+.|.|+|.||.++|.++|+|+|. ||||+|+
T Consensus 2 ~~E~~~~~~v~~dlPG~~~edi~V~v~-~~~L~I~g~~~~~~~~~~~~~~~F~R~~~LP~~vd~~~i~A~~~~~GvL~I~ 80 (85)
T 3q9p_A 2 GSHTADRWRVSLDVNHFAPDELTVKTK-DGVVEITGKHAARQDEHGYISRCFTRKYTLPPGVDPTQVSSSLSPEGTLTVE 80 (85)
T ss_dssp -CCCCCEEEEEEECTTTCCSEEEEEEE-TTEEEEEEEEC-------CCCEEEEEEEECCTTCCGGGCEEEECTTSEEEEE
T ss_pred ccCcCCEEEEEEECCCCChHHEEEEEE-CCEEEEEEEEccccCCCCEEEEEEEEEEECCCCcChHHcEEEECCCCEEEEE
Confidence 468999999999999999999999999 9999999988653 2233479999999999999999999998 9999999
Q ss_pred EeCc
Q 026451 106 VPKR 109 (238)
Q Consensus 106 lPK~ 109 (238)
+||.
T Consensus 81 lPK~ 84 (85)
T 3q9p_A 81 APMP 84 (85)
T ss_dssp EECC
T ss_pred EEcC
Confidence 9995
No 6
>1gme_A Heat shock protein 16.9B; small heat shock protein, chaperone, alpha-crystallin; 2.70A {Triticum aestivum} SCOP: b.15.1.1 PDB: 2h50_A 2h53_A 2byu_A
Probab=99.84 E-value=1.1e-20 Score=155.50 Aligned_cols=91 Identities=27% Similarity=0.491 Sum_probs=79.8
Q ss_pred cccccceeEEEcCCeEEEEEEcCCCCCCCeEEEEEeCCeEEEEEEEeee----cceE------eeEEEEEEECCCCCccC
Q 026451 22 KEFVPSSGWTEDSNGHYLLVDLPDFKKEQVKLQVDSSGNITVSGEMLTS----DNRY------IMRFEQMFPLPPNSDMD 91 (238)
Q Consensus 22 ~~~~P~~di~e~~d~~~l~vdLPGf~~edI~V~V~~~~~L~I~Ger~~~----e~~~------~r~F~r~~~LP~~vD~~ 91 (238)
..+.|++||+++++.|+|.++||||++++|+|++.+++.|+|+|++... ...| .+.|.|+|.||.++|.+
T Consensus 40 ~~~~p~~di~e~~d~~~v~~dlPGv~kedI~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~Er~~g~F~R~~~LP~~vd~~ 119 (151)
T 1gme_A 40 AFANARMDWKETPEAHVFKADLPGVKKEEVKVEVEDGNVLVVSGERTKEKEDKNDKWHRVERSSGKFVRRFRLLEDAKVE 119 (151)
T ss_dssp HHGGGCEEEEECSSEEEEEEECTTCCGGGEEEEEETTTEEEEEECCCCCCCCTTCEEEECCCCCCCEEEEEECSSCCCGG
T ss_pred cccCCceEEEEcCCEEEEEEECCCCChHHEEEEEecCCEEEEEEEEccccccCCceEEEEeEeccEEEEEEECCCCcccc
Confidence 3467999999999999999999999999999999536899999987653 1222 35899999999999999
Q ss_pred CeeEEEeCCEEEEEEeCcCCc
Q 026451 92 KISGKFDGELLYVTVPKRAKE 112 (238)
Q Consensus 92 ~I~A~~~dGvL~ItlPK~~~~ 112 (238)
+|+|+|+||||+|++||....
T Consensus 120 ~i~A~~~nGvL~I~lPK~~~~ 140 (151)
T 1gme_A 120 EVKAGLENGVLTVTVPKAEVK 140 (151)
T ss_dssp GCEEEEETTEEEEEEECCCCC
T ss_pred ceEEEEECCEEEEEEEccCcC
Confidence 999999999999999998654
No 7
>4eld_A MJ16.5-P1, small heat shock protein HSP16.5; chaperone; 2.70A {Methanocaldococcus jannaschii} PDB: 1shs_A
Probab=99.84 E-value=2.1e-20 Score=154.87 Aligned_cols=88 Identities=19% Similarity=0.283 Sum_probs=77.9
Q ss_pred ccccceeEEEcCCeEEEEEEcCCCCCCCeEEEEEeCCeEEEEEEEeee----cc------e-EeeEEEEEEECCCCCccC
Q 026451 23 EFVPSSGWTEDSNGHYLLVDLPDFKKEQVKLQVDSSGNITVSGEMLTS----DN------R-YIMRFEQMFPLPPNSDMD 91 (238)
Q Consensus 23 ~~~P~~di~e~~d~~~l~vdLPGf~~edI~V~V~~~~~L~I~Ger~~~----e~------~-~~r~F~r~~~LP~~vD~~ 91 (238)
.|.| +||+++++.|+|.++||||++++|+|++. ++.|+|+|++... .. + ..+.|.|+|.||.+||.+
T Consensus 55 ~~~p-vdi~e~~~~~~v~~dlPG~~~edi~V~~~-~~~L~I~g~~~~~~~~~~~~~~~~Er~~~g~f~R~~~LP~~vd~~ 132 (161)
T 4eld_A 55 GFMP-ISIIEGDQHIKVIAWLPGVNKEDIILNAV-GDTLEIRAKRSPLMITESERIIYSEIPEEEEIYRTIKLPATVKEE 132 (161)
T ss_dssp SCCC-EEEEECSSEEEEEEECTTCCGGGEEEEEE-TTEEEEEEECCCCCCCSSCEEEEECSCCCCEEEEEEECSSCBCGG
T ss_pred cccc-eeEEEeCCEEEEEEECCCCChHhEEEEEE-CCEEEEEEEEcccccCCCceEEEEEeeccccEEEEEECCCCcccc
Confidence 4555 99999999999999999999999999999 9999999988762 21 1 235899999999999999
Q ss_pred CeeEEEeCCEEEEEEeCcCCc
Q 026451 92 KISGKFDGELLYVTVPKRAKE 112 (238)
Q Consensus 92 ~I~A~~~dGvL~ItlPK~~~~ 112 (238)
+|+|+|+||||+|+|||....
T Consensus 133 ~i~A~~~nGvL~I~lpK~~~~ 153 (161)
T 4eld_A 133 NASAKFENGVLSVILPKAESS 153 (161)
T ss_dssp GCEEEEETTEEEEEEEBCGGG
T ss_pred cEEEEEECCEEEEEEEcCCCC
Confidence 999999999999999997553
No 8
>3aab_A Putative uncharacterized protein ST1653; alpha-crystallin domain, chaperone; 1.85A {Sulfolobus tokodaii} PDB: 3aac_A
Probab=99.83 E-value=1.6e-20 Score=149.00 Aligned_cols=88 Identities=22% Similarity=0.367 Sum_probs=78.5
Q ss_pred ccccceeEEEcCCeEEEEEEcCCCCCCCeEEEEEeC-CeEEEEEEEeeec-ceEee-----EEEEEEECCCCCccCCe-e
Q 026451 23 EFVPSSGWTEDSNGHYLLVDLPDFKKEQVKLQVDSS-GNITVSGEMLTSD-NRYIM-----RFEQMFPLPPNSDMDKI-S 94 (238)
Q Consensus 23 ~~~P~~di~e~~d~~~l~vdLPGf~~edI~V~V~~~-~~L~I~Ger~~~e-~~~~r-----~F~r~~~LP~~vD~~~I-~ 94 (238)
.+.|++||++++++|.|.++||||++++|+|++. + +.|+|+|++.... ..|.+ .|.|+|.||.++|.++| +
T Consensus 22 ~~~P~~di~e~~~~~~v~~~lPG~~~edi~V~v~-~~~~L~I~g~~~~~~~~~~~~~Er~~~f~R~~~LP~~vd~~~i~~ 100 (123)
T 3aab_A 22 LVYPPVDMYEEGGYLVVVADLAGFNKEKIKARVS-GQNELIIEAEREITEPGVKYLTQRPKYVRKVIRLPYNVAKDAEIS 100 (123)
T ss_dssp HHCSCEEEEEETTEEEEEEECCSCCGGGCEEEEE-TTTEEEEEEECCCCCCSCEEEECSCSEEEEEEECSSEECTTCCCE
T ss_pred cCCCcEEEEEcCCEEEEEEECCCCCHHHEEEEEe-CCCEEEEEEEEeccCCCeEEEEEEeEEEEEEEECCCCcCcchhCe
Confidence 4569999999999999999999999999999999 8 9999999976542 22221 79999999999999999 9
Q ss_pred EEEeCCEEEEEEeCcCC
Q 026451 95 GKFDGELLYVTVPKRAK 111 (238)
Q Consensus 95 A~~~dGvL~ItlPK~~~ 111 (238)
|+|+||+|+|++||...
T Consensus 101 A~~~~GvL~I~lPK~~~ 117 (123)
T 3aab_A 101 GKYENGVLTIRIPIAGT 117 (123)
T ss_dssp EEEETTEEEEEEEGGGE
T ss_pred eEEcCCEEEEEEEcCCC
Confidence 99999999999999854
No 9
>2y1y_A Alpha-crystallin B chain,; small heat shock protein, chaperone, stress protein, eye LEN protein, cataract; HET: MSE; 2.00A {Homo sapiens} PDB: 2y22_A 2wj7_A 3l1g_A 2y1z_A
Probab=99.83 E-value=4e-20 Score=139.60 Aligned_cols=82 Identities=18% Similarity=0.312 Sum_probs=67.4
Q ss_pred EEcCCeEEEEEEcCCCCCCCeEEEEEeCCeEEEEEEEeee--c-ceEeeEEEEEEECCCCCccCCeeEEE-eCCEEEEEE
Q 026451 31 TEDSNGHYLLVDLPDFKKEQVKLQVDSSGNITVSGEMLTS--D-NRYIMRFEQMFPLPPNSDMDKISGKF-DGELLYVTV 106 (238)
Q Consensus 31 ~e~~d~~~l~vdLPGf~~edI~V~V~~~~~L~I~Ger~~~--e-~~~~r~F~r~~~LP~~vD~~~I~A~~-~dGvL~Itl 106 (238)
.++++.|+|.++||||++++|+|++. ++.|+|+|++... + ..+.+.|.|+|.||.++|.++|+|+| .||+|+|++
T Consensus 2 k~~~~~~~v~~dlPG~~~edi~V~v~-~~~L~I~g~~~~~~~~~~~~~~ef~R~~~LP~~vd~~~i~A~~~~~GvL~I~~ 80 (90)
T 2y1y_A 2 AMEKDRFSVNLDVKHFSPEELKVKVL-GDVIEVHGKHEERQDEHGFISREFHRKYRIPADVDPLTITSSMSSDGVLTVNG 80 (90)
T ss_dssp ----CCEEEEEECTTSCGGGEEEEEE-TTEEEEEEEEEEEECSSSEEEEEEEEEEECCTTBCGGGCEEEECTTSEEEEEE
T ss_pred CcCCCEEEEEEECCCCcHHHeEEEEE-CCEEEEEEEEecccCCCCEEEEEEEEEEECCCCcChhHcEEEECCCCEEEEEE
Confidence 36789999999999999999999999 9999999987653 2 23346899999999999999999999 799999999
Q ss_pred eCcCCcc
Q 026451 107 PKRAKEE 113 (238)
Q Consensus 107 PK~~~~~ 113 (238)
||.....
T Consensus 81 pK~~~~~ 87 (90)
T 2y1y_A 81 PRKQVSG 87 (90)
T ss_dssp CBC----
T ss_pred EcCCCCC
Confidence 9986543
No 10
>2klr_A Alpha-crystallin B chain; protein, dimer, oligomer, heterogeneity, intermolecular INTE chaperone, SHSP, human, small heat-shock protein, cataract; NMR {Homo sapiens} PDB: 2ygd_A
Probab=99.81 E-value=8e-20 Score=154.28 Aligned_cols=96 Identities=17% Similarity=0.225 Sum_probs=71.6
Q ss_pred ceeEEEcCCeEEEEEEcCCCCCCCeEEEEEeCCeEEEEEEEeee---cceEeeEEEEEEECCCCCccCCeeEEE-eCCEE
Q 026451 27 SSGWTEDSNGHYLLVDLPDFKKEQVKLQVDSSGNITVSGEMLTS---DNRYIMRFEQMFPLPPNSDMDKISGKF-DGELL 102 (238)
Q Consensus 27 ~~di~e~~d~~~l~vdLPGf~~edI~V~V~~~~~L~I~Ger~~~---e~~~~r~F~r~~~LP~~vD~~~I~A~~-~dGvL 102 (238)
.+||+++++.|+|.++||||++|+|+|++. ++.|+|+|++... ++.+.+.|.|+|.||.+||.++|+|+| +||||
T Consensus 65 ~~dv~e~~d~~~v~~dlPG~~~edI~V~v~-~~~L~I~g~~~~~~~~~~~~~reF~R~~~LP~~Vd~~~i~A~~s~dGvL 143 (175)
T 2klr_A 65 LSEMRLEKDRFSVNLDVKHFSPEELKVKVL-GDVIEVHGKHEERQDEHGFISREFHRKYRIPADVDPLTITSSLSSDGVL 143 (175)
T ss_dssp ----CCCCSEEEEEECCSSCCGGGEEEEEE-TTEEEEEEEEEEEEETTEEEEEEEEEEEECTTTCCTTTCEEEECTTSCE
T ss_pred ceEEEEcCCeEEEEEECCCCChHHEEEEEE-CCEEEEEEEEcccccCCceEEEEEEEEEECCCCcChhHeEEEEcCCCEE
Confidence 379999999999999999999999999999 9999999987653 233446899999999999999999999 69999
Q ss_pred EEEEeCcCCccCCCCCCCCcCCCC
Q 026451 103 YVTVPKRAKEESTEQPSLPASASG 126 (238)
Q Consensus 103 ~ItlPK~~~~~~~~~p~~~~~~~~ 126 (238)
+|++||..... .++.+.+..+
T Consensus 144 ~I~lPK~~~~~---~~r~I~I~~~ 164 (175)
T 2klr_A 144 TVNGPRKQVSG---PERTIPITRE 164 (175)
T ss_dssp EEEEECC-----------------
T ss_pred EEEEECCCCCC---CCeEEEEecC
Confidence 99999975432 2345555443
No 11
>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}
Probab=99.77 E-value=1.5e-18 Score=158.38 Aligned_cols=89 Identities=18% Similarity=0.328 Sum_probs=81.2
Q ss_pred ccccceeEEEcCC----eEEEEEEcCCCCCCCeEEEEEeCCeEEEEEEEeee--cceEeeEEEEEEECCCCCccCCeeEE
Q 026451 23 EFVPSSGWTEDSN----GHYLLVDLPDFKKEQVKLQVDSSGNITVSGEMLTS--DNRYIMRFEQMFPLPPNSDMDKISGK 96 (238)
Q Consensus 23 ~~~P~~di~e~~d----~~~l~vdLPGf~~edI~V~V~~~~~L~I~Ger~~~--e~~~~r~F~r~~~LP~~vD~~~I~A~ 96 (238)
.+.|++||+|+++ .|.|.++||||++++|+|++. ++.|+|+|++... +++..+.|.|+|.||.+||.++|+|+
T Consensus 96 ~~~p~vDi~E~~~dgk~~~~v~~dlPG~~~edI~V~v~-~~~L~I~ge~~~~~e~~r~~g~F~R~~~LP~~Vd~e~i~A~ 174 (314)
T 2bol_A 96 ELDFLKDAYEVGKDGRLHFKVYFNVKNFKAEEITIKAD-KNKLVVRAQKSVACGDAAMSESVGRSIPLPPSVDRNHIQAT 174 (314)
T ss_dssp TTGGGGGCEEECTTSSEEEEEEEECTTCCTTTEEEEEE-TTEEEEEECCBSSTTCCCBCCCEEEEEECCTTBCGGGCEEE
T ss_pred cCCCccceEEcCCCCceEEEEEEECCCCchHHeEEEEE-CCEEEEEEEEeccCCCCEEEEEEEEEEECCCCccccccEEE
Confidence 3779999999999 999999999999999999999 9999999988653 34555799999999999999999999
Q ss_pred Ee-CCEEEEEEeCcCCc
Q 026451 97 FD-GELLYVTVPKRAKE 112 (238)
Q Consensus 97 ~~-dGvL~ItlPK~~~~ 112 (238)
|+ ||||+|++||..+.
T Consensus 175 ~~~nGVL~I~lPK~~~~ 191 (314)
T 2bol_A 175 ITTDDVLVIEAPVNEPN 191 (314)
T ss_dssp ECSSSEEEEEEEBSSCC
T ss_pred EeCCCEEEEEEeccCcc
Confidence 99 99999999998654
No 12
>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}
Probab=99.65 E-value=1.4e-16 Score=145.53 Aligned_cols=83 Identities=18% Similarity=0.211 Sum_probs=69.8
Q ss_pred cceeEEEcC---CeEEEEEEc-CCCCCCCeEEEEEeCCeEEEEEEEeeec------ceEeeEEEEEEECCCCCccCCeeE
Q 026451 26 PSSGWTEDS---NGHYLLVDL-PDFKKEQVKLQVDSSGNITVSGEMLTSD------NRYIMRFEQMFPLPPNSDMDKISG 95 (238)
Q Consensus 26 P~~di~e~~---d~~~l~vdL-PGf~~edI~V~V~~~~~L~I~Ger~~~e------~~~~r~F~r~~~LP~~vD~~~I~A 95 (238)
..++|.+++ +.|.|.++| |||+|++|+|+|+ ++.|+|+|++..++ .+++|.|.|+|.||++||.++|+|
T Consensus 221 ~~~~i~e~~~~~~~~~v~~~ldPG~~~edi~V~v~-~~~LtI~ge~~~~~~~~~~~Er~~g~F~R~~~LP~~vd~~~i~A 299 (314)
T 2bol_A 221 EGLEIVTAEDGSKKIHLELKVDPHFAPKDVKVWAK-GNKVYVHGVTGKEEKTENASHSEHREFYKAFVTPEVVDASKTQA 299 (314)
T ss_dssp CEEEEEECTTSCEEEEEEEECCTTCCGGGEEEEES-SSEEEEEEEEC------------CEEEEEEEECSSEECGGGCEE
T ss_pred CCCcEEEecCCCcEEEEEEEcCCCCChHHeEEEEE-CCEEEEEEEEeccCCceEEEEEeeeEEEEEEECCCCcChHHeEE
Confidence 446666655 578899999 9999999999999 99999999987652 344579999999999999999999
Q ss_pred EEeCCEEEEEEeCc
Q 026451 96 KFDGELLYVTVPKR 109 (238)
Q Consensus 96 ~~~dGvL~ItlPK~ 109 (238)
+|+||||+|++||.
T Consensus 300 ~~~dGvL~i~~Pk~ 313 (314)
T 2bol_A 300 EIVDGLMVVEAPLF 313 (314)
T ss_dssp EEETTEEEEEEEEE
T ss_pred EEeCCEEEEEEecC
Confidence 99999999999986
No 13
>1rl1_A Suppressor of G2 allele of SKP1 homolog; beta sandwich, 7 beta strands, similar to P23, lacking LAST beta strand SEEN in P23, protein degradation; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=98.93 E-value=2.7e-09 Score=82.66 Aligned_cols=83 Identities=7% Similarity=0.093 Sum_probs=73.0
Q ss_pred ccccceeEEEcCCeEEEEEEcCCCCCCCeEEEEEeCCeEEEEEEEeeecceEeeEEEEEEECCCCCccCCeeEEEeCCEE
Q 026451 23 EFVPSSGWTEDSNGHYLLVDLPDFKKEQVKLQVDSSGNITVSGEMLTSDNRYIMRFEQMFPLPPNSDMDKISGKFDGELL 102 (238)
Q Consensus 23 ~~~P~~di~e~~d~~~l~vdLPGf~~edI~V~V~~~~~L~I~Ger~~~e~~~~r~F~r~~~LP~~vD~~~I~A~~~dGvL 102 (238)
...|+++|+++.+.++|.+.|||+.++++.|.+. ++.|.|++.... + ..|...+.|+..||++..++++.+|.|
T Consensus 7 ~~~~~~~W~Qt~~~V~v~i~l~~v~~~~v~v~~~-~~~l~v~~~~~~--~---~~y~~~~~L~~~I~~e~s~~~~~~~~l 80 (114)
T 1rl1_A 7 QSKIKYDWYQTESQVVITLMIKNVQKNDVNVEFS-EKELSALVKLPS--G---EDYNLKLELLHPIIPEQSTFKVLSTKI 80 (114)
T ss_dssp -CCCCEEEEECSSEEEEEECCCSCCGGGEEEECS-SSCEEEEEECTT--S---SEEEEEECBSSCCCGGGEEEEECSSSE
T ss_pred CCCCCccEEeCCCEEEEEEEeCCCCHHHCEEEEE-cCEEEEEEEeCC--C---cEEEEEeeCCCcCCccccEEEEECCEE
Confidence 3468899999999999999999999999999999 899999986431 1 268888999999999999999999999
Q ss_pred EEEEeCcCC
Q 026451 103 YVTVPKRAK 111 (238)
Q Consensus 103 ~ItlPK~~~ 111 (238)
.|+|+|..+
T Consensus 81 ~i~L~K~~~ 89 (114)
T 1rl1_A 81 EIKLKKPEA 89 (114)
T ss_dssp EEEEECSSC
T ss_pred EEEEEcCCC
Confidence 999999854
No 14
>2xcm_C SGT1-like protein, cytosolic heat shock protein 90; chaperone-protein binding complex, stress response; HET: ADP; 2.20A {Arabidopsis thaliana} PDB: 2jki_S*
Probab=98.88 E-value=3.8e-09 Score=78.39 Aligned_cols=81 Identities=11% Similarity=-0.017 Sum_probs=71.8
Q ss_pred ccceeEEEcCCeEEEEEEcCCCCCCCeEEEEEeCCeEEEEEEEeeecceEeeEEEEEEECCCCCccCCeeEEEeCCEEEE
Q 026451 25 VPSSGWTEDSNGHYLLVDLPDFKKEQVKLQVDSSGNITVSGEMLTSDNRYIMRFEQMFPLPPNSDMDKISGKFDGELLYV 104 (238)
Q Consensus 25 ~P~~di~e~~d~~~l~vdLPGf~~edI~V~V~~~~~L~I~Ger~~~e~~~~r~F~r~~~LP~~vD~~~I~A~~~dGvL~I 104 (238)
.|+++|+++.+..+|.+.+||+.++++.|.+. .+.|.|++.... + ..|...+.|+..||++..++++.+|.|.|
T Consensus 2 ~~~~~W~Qt~~~V~v~i~~~~v~~~~v~v~~~-~~~l~v~~~~~~--~---~~y~~~~~L~~~I~~~~s~~~~~~~~l~i 75 (92)
T 2xcm_C 2 KYRHEYYQKPEEVVVTVFAKGIPKQNVNIDFG-EQILSVVIEVPG--E---DAYYLQPRLFGKIIPDKCKYEVLSTKIEI 75 (92)
T ss_dssp CSEEEEEEETTEEEEEEECCSCCGGGEEEEEC-SSBEEEEECCTT--S---CCEEECCBBSSCBCGGGCEEEECSSCEEE
T ss_pred CccccEEeCCCEEEEEEEECCCChHHeEEEEE-CCEEEEEEEcCC--C---cEEEEeeEcCCccCchhEEEEEECCEEEE
Confidence 47899999999999999999999999999999 999999875421 1 25778889999999999999999999999
Q ss_pred EEeCcCC
Q 026451 105 TVPKRAK 111 (238)
Q Consensus 105 tlPK~~~ 111 (238)
+|+|..+
T Consensus 76 ~L~K~~~ 82 (92)
T 2xcm_C 76 CLAKADI 82 (92)
T ss_dssp EEEBSSS
T ss_pred EEEcCCC
Confidence 9999854
No 15
>2k8q_A Protein SHQ1; beta-sandwich, CS domain, nucleus, structural protein; NMR {Saccharomyces cerevisiae}
Probab=97.97 E-value=1.1e-05 Score=65.19 Aligned_cols=79 Identities=18% Similarity=0.312 Sum_probs=68.5
Q ss_pred cccceeEEEcCCeEEEEEEcCCCC--CCCeEEEEEeCCeEEEEEEEeeecceEeeEEEEEEECCCCC-ccCCeeEEEe--
Q 026451 24 FVPSSGWTEDSNGHYLLVDLPDFK--KEQVKLQVDSSGNITVSGEMLTSDNRYIMRFEQMFPLPPNS-DMDKISGKFD-- 98 (238)
Q Consensus 24 ~~P~~di~e~~d~~~l~vdLPGf~--~edI~V~V~~~~~L~I~Ger~~~e~~~~r~F~r~~~LP~~v-D~~~I~A~~~-- 98 (238)
..|.+.+.++++..+|.|.+|... ..++++.|+ +..+... ...|..++.||..| |.+.-+|+|+
T Consensus 2 iTP~F~itQd~e~viV~Ik~P~~~~~~sdiei~v~-~~~F~F~----------~~PYyLRL~LP~~V~e~~~~kA~YD~d 70 (134)
T 2k8q_A 2 ITPRFSITQDEEFIFLKIFISNIRFSAVGLEIIIQ-ENMIIFH----------LSPYYLRLRFPHELIDDERSTAQYDSK 70 (134)
T ss_dssp CCSEEEEEECSSEEEEEEECCSSCCCSSSCCCEEC-SSSEEEC----------SSSSCEEECCSSCEECCSSCEEEEETT
T ss_pred cCceEEEEECCCEEEEEEEcCccccCccccEEEEe-CCEEEEe----------cCCeEEEecCCCeeecCCCcceeEecc
Confidence 469999999999999999999999 899999998 7776663 12577889999998 9999999997
Q ss_pred CCEEEEEEeCcCCcc
Q 026451 99 GELLYVTVPKRAKEE 113 (238)
Q Consensus 99 dGvL~ItlPK~~~~~ 113 (238)
.|.|+|+|||..+-+
T Consensus 71 ~~~~~VtLpK~~~Ge 85 (134)
T 2k8q_A 71 DECINVKVAKLNKNE 85 (134)
T ss_dssp TTEEEEEEEESSTTC
T ss_pred CCEEEEEEeCCCCCC
Confidence 799999999987654
No 16
>3eud_A Protein SHQ1; CS domain HSP20-like domain SHQ1 H/ACA snoRNP ribosome biogenesis, nucleus, nuclear protein; HET: MSE; 2.40A {Saccharomyces cerevisiae}
Probab=97.95 E-value=9e-05 Score=58.35 Aligned_cols=80 Identities=18% Similarity=0.270 Sum_probs=67.8
Q ss_pred ccccceeEEEcCCeEEEEEEcCCCC--CCCeEEEEEeCCeEEEEEEEeeecceEeeEEEEEEECCCCC-ccCCeeEEEe-
Q 026451 23 EFVPSSGWTEDSNGHYLLVDLPDFK--KEQVKLQVDSSGNITVSGEMLTSDNRYIMRFEQMFPLPPNS-DMDKISGKFD- 98 (238)
Q Consensus 23 ~~~P~~di~e~~d~~~l~vdLPGf~--~edI~V~V~~~~~L~I~Ger~~~e~~~~r~F~r~~~LP~~v-D~~~I~A~~~- 98 (238)
...|.+.+.++++..+|.+-+|.++ ..++++.|+ ++.++... ..|-.++.||..+ |-+.-+|+|+
T Consensus 15 ~iTP~F~itQDdefv~I~I~~p~ir~~a~~~ei~vd-~~~F~F~~----------~PYyLRL~lP~~vved~~~~A~YD~ 83 (115)
T 3eud_A 15 MITPRFSITQDEEFIFLKIFISNIRFSAVGLEIIIQ-ENMIIFHL----------SPYYLRLRFPHELIDDERSTAQYDS 83 (115)
T ss_dssp CBCCCEEEEECSSEEEEEEECCSCCCCSSSCEEEEE-TTEEEEEE----------TTEEEEEECSSCEECSTTCEEEEET
T ss_pred EeCCcEEEEECCCEEEEEEEcCceecccCccEEEEe-CCEEEEec----------CCeEEEEecCcceecCCCcceEEeC
Confidence 3579999999999999999999866 889999999 88776642 2577889999986 7788899997
Q ss_pred -CCEEEEEEeCcCCcc
Q 026451 99 -GELLYVTVPKRAKEE 113 (238)
Q Consensus 99 -dGvL~ItlPK~~~~~ 113 (238)
+|.++|++||..+-+
T Consensus 84 d~g~~~v~lpK~~~GE 99 (115)
T 3eud_A 84 KDECINVKVAKLNKNE 99 (115)
T ss_dssp TTTEEEEEEEESSTTC
T ss_pred CCcEEEEEEcCCcCCC
Confidence 799999999987643
No 17
>1x5m_A Calcyclin-binding protein; CS domain, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.90 E-value=0.00015 Score=57.20 Aligned_cols=86 Identities=12% Similarity=0.196 Sum_probs=71.3
Q ss_pred CccccccceeEEEcCCeEEEEEEcCCC---CCCCeEEEEEeCCeEEEEEEEeeecceEeeEEEEEEE-CCCCCccCCeeE
Q 026451 20 IVKEFVPSSGWTEDSNGHYLLVDLPDF---KKEQVKLQVDSSGNITVSGEMLTSDNRYIMRFEQMFP-LPPNSDMDKISG 95 (238)
Q Consensus 20 ~~~~~~P~~di~e~~d~~~l~vdLPGf---~~edI~V~V~~~~~L~I~Ger~~~e~~~~r~F~r~~~-LP~~vD~~~I~A 95 (238)
.|..-.+.|+|.++.+...|.|.|+|+ .++++.|.+. .+.|.|...... + ..|...+. |-..||+++-+.
T Consensus 15 ~y~~~~~~y~W~Qt~~~V~i~I~l~~~~~~~~~~v~V~~~-~~~l~v~~~~~~--~---~~y~~~~~~L~~~I~~e~S~~ 88 (127)
T 1x5m_A 15 GYTVKISNYGWDQSDKFVKIYITLTGVHQVPTENVQVHFT-ERSFDLLVKNLN--G---KSYSMIVNNLLKPISVEGSSK 88 (127)
T ss_dssp CCCEECCSCEEEEETTEEEEEEECTTTTTSCTTSEEEEEC-SSEEEEEECSCS--S---SCEEEEEECBSSCCCTTTCEE
T ss_pred ccccCccEEEEEcCCCEEEEEEEeCCCCcCCccccEEEEE-cCEEEEEEEcCC--C---CcEEEEhHHhcCccCcccCEE
Confidence 444446799999999999999999999 8999999999 899999863221 1 24667775 999999999888
Q ss_pred EEeCCEEEEEEeCcCC
Q 026451 96 KFDGELLYVTVPKRAK 111 (238)
Q Consensus 96 ~~~dGvL~ItlPK~~~ 111 (238)
++.++.|.|+|-|..+
T Consensus 89 ~v~~~kVei~L~K~~~ 104 (127)
T 1x5m_A 89 KVKTDTVLILCRKKVE 104 (127)
T ss_dssp EEETTEEEEEEECSSS
T ss_pred EEeCCEEEEEEEECCC
Confidence 8889999999999854
No 18
>1wh0_A Ubiquitin carboxyl-terminal hydrolase 19; USP, CS domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=97.70 E-value=0.00017 Score=57.99 Aligned_cols=98 Identities=9% Similarity=0.041 Sum_probs=75.7
Q ss_pred ccccCCCCccccccceeEEEc-CCeEEEEEEcCCCCCCCeEEEEEeCCeEEEEEEEeeec------ceE-eeEEEEEEEC
Q 026451 13 KTLTNNPIVKEFVPSSGWTED-SNGHYLLVDLPDFKKEQVKLQVDSSGNITVSGEMLTSD------NRY-IMRFEQMFPL 84 (238)
Q Consensus 13 ~~~~~~~~~~~~~P~~di~e~-~d~~~l~vdLPGf~~edI~V~V~~~~~L~I~Ger~~~e------~~~-~r~F~r~~~L 84 (238)
.+-++-++...-.++++|+++ .+..+|.|.++++.++++.|.+. .+.|.|........ .+. -..|...+.|
T Consensus 7 ~~~~~~~~~~~~~~r~~W~Qt~~~~V~vtI~~k~v~~~~v~V~f~-~~~l~v~~~~~~~~~l~~~~a~g~~~~y~~~~~L 85 (134)
T 1wh0_A 7 GVDEPESMVNLAFVKNDSYEKGPDSVVVHVYVKEICRDTSRVLFR-EQDFTLIFQTRDGNFLRLHPGCGPHTTFRWQVKL 85 (134)
T ss_dssp SSCCGGGSEEESCCCEEEEEETTTEEEEEEECCSBCTTSCEEEEC-SSEEEEEECBCCHHHHHHSTTCCTTSCEEEEEEB
T ss_pred CCcCCcccccccCCCeEEEcCCCCEEEEEEEeCCCCcccCEEEEE-CCEEEEEEEcCCCcccccccccCcceeEEEeccc
Confidence 334444555555789999999 99999999999999999999999 99999986433211 000 0147777889
Q ss_pred CCCCccCCeeEEEeCCEEEEEEeCcCC
Q 026451 85 PPNSDMDKISGKFDGELLYVTVPKRAK 111 (238)
Q Consensus 85 P~~vD~~~I~A~~~dGvL~ItlPK~~~ 111 (238)
-..|+++.-+.++.++-|.|+|.|...
T Consensus 86 ~~~I~pe~S~~~v~~~kIeI~L~K~e~ 112 (134)
T 1wh0_A 86 RNLIEPEQCTFCFTASRIDICLRKRQS 112 (134)
T ss_dssp SSCEEEEEEEEEECSSEEEEEEEESSS
T ss_pred cccCCchhCEEEEeCCEEEEEEEECCC
Confidence 999999998888889999999999753
No 19
>1wgv_A KIAA1068 protein; CS domain, HSP20-like fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.15.1.4
Probab=97.47 E-value=0.0016 Score=51.02 Aligned_cols=82 Identities=17% Similarity=0.171 Sum_probs=67.1
Q ss_pred ccccceeEEEcCCeEEEEEEcC-CC-CCCCeEEEEEeCCeEEEEEEEeeecceEeeEEEEEEECCCCCccCCeeEEEeCC
Q 026451 23 EFVPSSGWTEDSNGHYLLVDLP-DF-KKEQVKLQVDSSGNITVSGEMLTSDNRYIMRFEQMFPLPPNSDMDKISGKFDGE 100 (238)
Q Consensus 23 ~~~P~~di~e~~d~~~l~vdLP-Gf-~~edI~V~V~~~~~L~I~Ger~~~e~~~~r~F~r~~~LP~~vD~~~I~A~~~dG 100 (238)
.-.|.|.|.++.+..+|.|.|| |+ ++++|.|.+. .+.|.|...... +. .+.-...|...|+++.-+.++.++
T Consensus 17 ~~~~~y~W~Qt~~~V~i~I~lp~~~~~~kdv~V~i~-~~~l~v~~~~~~--~~---~~~~~~~L~~~I~~e~S~w~i~~~ 90 (124)
T 1wgv_A 17 AVRENYTWSQDYTDLEVRVPVPKHVVKGKQVSVALS-SSSIRVAMLEEN--GE---RVLMEGKLTHKINTESSLWSLEPG 90 (124)
T ss_dssp BCCSSCEEEEETTEEEEEEECCTTCCSGGGEEEEEC-SSEEEEEEECSS--SE---EEEEEEEBSSCBCTTTCEEEECTT
T ss_pred CcCCcEEEEEcccEEEEEEEcCCCCCchhheEEEEE-cCEEEEEEEccC--CC---ceEEcccccCcCCCcCCEEEEeCC
Confidence 3468999999999999999998 88 8999999999 999999864311 11 233556799999999988889887
Q ss_pred -EEEEEEeCcC
Q 026451 101 -LLYVTVPKRA 110 (238)
Q Consensus 101 -vL~ItlPK~~ 110 (238)
.|.|+|-|..
T Consensus 91 k~v~i~L~K~~ 101 (124)
T 1wgv_A 91 KCVLVNLSKVG 101 (124)
T ss_dssp SEEEEEECBSS
T ss_pred CEEEEEEEECC
Confidence 4999999974
No 20
>2o30_A Nuclear movement protein; MCSG, structural genomics, PSI-2, structure initiative; 1.66A {Encephalitozoon cuniculi}
Probab=97.41 E-value=0.00093 Score=52.89 Aligned_cols=75 Identities=16% Similarity=0.220 Sum_probs=62.1
Q ss_pred ccceeEEEcCCeEEEEEEcC-CCCCCCeEEEEEeCCeEEEEEEEeeecceEeeEEEEEEECCCCCccCCeeEEEeCCEEE
Q 026451 25 VPSSGWTEDSNGHYLLVDLP-DFKKEQVKLQVDSSGNITVSGEMLTSDNRYIMRFEQMFPLPPNSDMDKISGKFDGELLY 103 (238)
Q Consensus 25 ~P~~di~e~~d~~~l~vdLP-Gf~~edI~V~V~~~~~L~I~Ger~~~e~~~~r~F~r~~~LP~~vD~~~I~A~~~dGvL~ 103 (238)
.|.|.|.++.+..+|.|.|| |+++++|.|.+. .+.|.|... +. . .-...|...|+++.-+.++.++-|.
T Consensus 4 ~~~y~W~Qt~~~V~i~I~lp~~~~~kdv~V~i~-~~~l~v~~~-----g~---~-~~~~~L~~~I~~e~S~w~i~~~kv~ 73 (131)
T 2o30_A 4 EAKYTWDQELNEINIQFPVTGDADSSAIKIRMV-GKKICVKNQ-----GE---I-VIDGELLHEVDVSSLWWVINGDVVD 73 (131)
T ss_dssp -CCCEEEEETTEEEEEEECC---CCSCEEEEEE-TTEEEEEET-----TE---E-EEEEEBSSCEEEEEEEEEEETTEEE
T ss_pred CCcEEEEecCCEEEEEEECCCCCCccceEEEEE-CCEEEEEEC-----CE---e-eEccccccccccccCEEEEeCCEEE
Confidence 48899999999999999996 899999999999 999999862 11 1 3345788999999988888888899
Q ss_pred EEEeCc
Q 026451 104 VTVPKR 109 (238)
Q Consensus 104 ItlPK~ 109 (238)
|+|-|.
T Consensus 74 i~L~K~ 79 (131)
T 2o30_A 74 VNVTKK 79 (131)
T ss_dssp EEEEES
T ss_pred EEEEEC
Confidence 999997
No 21
>3qor_A Nuclear migration protein NUDC; beta-sandwich, chaperone, protein cell cycle; HET: OCS; 1.75A {Homo sapiens} PDB: 3qor_B* 2cr0_A
Probab=97.40 E-value=0.0011 Score=51.90 Aligned_cols=81 Identities=15% Similarity=0.112 Sum_probs=65.7
Q ss_pred cccccceeEEEcCCeEEEEEEcC-C--CCCCCeEEEEEeCCeEEEEEEEeeecceEeeEEEEEEECCCCCccCCeeEEEe
Q 026451 22 KEFVPSSGWTEDSNGHYLLVDLP-D--FKKEQVKLQVDSSGNITVSGEMLTSDNRYIMRFEQMFPLPPNSDMDKISGKFD 98 (238)
Q Consensus 22 ~~~~P~~di~e~~d~~~l~vdLP-G--f~~edI~V~V~~~~~L~I~Ger~~~e~~~~r~F~r~~~LP~~vD~~~I~A~~~ 98 (238)
..-.|.|.|.++.+...|.|.|| | ++.++|.|.+. .+.|.|.... . .+.-...|...|+++.-..+++
T Consensus 13 G~~~~~y~W~Qt~~eV~v~V~lp~~~~~~~kdv~V~i~-~~~l~v~~kg----~----~~~~~g~L~~~I~~deS~w~i~ 83 (121)
T 3qor_A 13 GADLPNYRWTQTLSELDLAVPFCVNFRLKGKDMVVDIQ-RRHLRVGLKG----Q----PAIIDGELYNEVKVEESSWLIA 83 (121)
T ss_dssp SCBCSSCEEEECSSEEEEEEECCCSSCCCGGGEEEEEE-TTEEEEEETT----S----CCSEEEEBSSCBCGGGCEEEEE
T ss_pred CCcCCCEEEEEccceEEEEEECCCCCcccccceEEEEE-cCEEEEEEcC----c----ceEEeccccccccccccEEEEc
Confidence 34468899999999999999998 4 78999999999 8899886421 1 1223457888999999889999
Q ss_pred CC-EEEEEEeCcCC
Q 026451 99 GE-LLYVTVPKRAK 111 (238)
Q Consensus 99 dG-vL~ItlPK~~~ 111 (238)
+| .|.|+|-|...
T Consensus 84 ~~~~i~i~L~K~~~ 97 (121)
T 3qor_A 84 DGAVVTVHLEKINK 97 (121)
T ss_dssp TTTEEEEEEEBSSS
T ss_pred CCCEEEEEEEECCC
Confidence 88 99999998743
No 22
>2rh0_A NUDC domain-containing protein 2; 13542905, nuclear movement protein, structural genomics, joint center for structural genomics, JCSG; 1.95A {Mus musculus}
Probab=97.33 E-value=0.0013 Score=53.87 Aligned_cols=82 Identities=12% Similarity=0.226 Sum_probs=67.7
Q ss_pred CccccccceeEEEcCCeEEEEEEcC-CCCCCCeEEEEEeCCeEEEEEEEeeecceEeeEEEEEEECCCCCccCCeeEEEe
Q 026451 20 IVKEFVPSSGWTEDSNGHYLLVDLP-DFKKEQVKLQVDSSGNITVSGEMLTSDNRYIMRFEQMFPLPPNSDMDKISGKFD 98 (238)
Q Consensus 20 ~~~~~~P~~di~e~~d~~~l~vdLP-Gf~~edI~V~V~~~~~L~I~Ger~~~e~~~~r~F~r~~~LP~~vD~~~I~A~~~ 98 (238)
+.....|.|.|.++.+..+|+|.|| |+++++|.|.+. .+.|.|... +. .+ -...|...|+++.-+.++.
T Consensus 8 ~~~~~~~~y~W~Qt~~eV~v~I~lp~~~~~kdv~V~i~-~~~L~v~~k-----g~---~~-l~g~L~~~I~~eeS~w~i~ 77 (157)
T 2rh0_A 8 VVPCGTPWGQWYQTLEEVFIEVQVPPGTRAQDIQCGLQ-SRHVALAVG-----GR---EI-LKGKLFDSTIADEGTWTLE 77 (157)
T ss_dssp CCCEECSSEEEEECSSEEEEEEECCTTCCGGGEEEEEC-SSEEEEEET-----TE---EE-EEEEBSSCBCGGGCEEEEE
T ss_pred cccCCCCcEEEEecCCEEEEEEECCCCCcccceEEEEe-cCEEEEEEC-----CE---EE-EeeccccccCccccEEEEc
Confidence 3444568999999999999999998 899999999999 999999753 11 12 4467889999999889998
Q ss_pred CC-EEEEEEeCcCC
Q 026451 99 GE-LLYVTVPKRAK 111 (238)
Q Consensus 99 dG-vL~ItlPK~~~ 111 (238)
++ +|.|+|-|...
T Consensus 78 ~~k~v~I~L~K~~~ 91 (157)
T 2rh0_A 78 DRKMVRIVLTKTKR 91 (157)
T ss_dssp CCCEEEEEEEBSSC
T ss_pred CCcEEEEEEEEcCC
Confidence 87 59999999854
No 23
>1ejf_A Progesterone receptor P23; chaperone, CO-chaperone, beta-sandwich; 2.49A {Homo sapiens} SCOP: b.15.1.2
Probab=97.31 E-value=0.00094 Score=52.46 Aligned_cols=79 Identities=14% Similarity=0.144 Sum_probs=66.1
Q ss_pred cceeEEEcCCeEEEEEEcCCCCCCCeEEEEEeCCeEEEEEEEeeecceEeeEEEEEEECCCCCccCCeeEEEeCCEEEEE
Q 026451 26 PSSGWTEDSNGHYLLVDLPDFKKEQVKLQVDSSGNITVSGEMLTSDNRYIMRFEQMFPLPPNSDMDKISGKFDGELLYVT 105 (238)
Q Consensus 26 P~~di~e~~d~~~l~vdLPGf~~edI~V~V~~~~~L~I~Ger~~~e~~~~r~F~r~~~LP~~vD~~~I~A~~~dGvL~It 105 (238)
|.++|+++.+..+|+|.||+. +++.|.+. .+.|.|++..... + ..|.-.+.|-..|+++.-+.++.+.-+.|+
T Consensus 4 ~~~~W~Qt~~~V~ltI~~~~~--~~~~V~~~-~~~l~~~~~~~~~-~---~~y~~~l~L~~~I~~e~S~~~v~~~kiei~ 76 (125)
T 1ejf_A 4 ASAKWYDRRDYVFIEFCVEDS--KDVNVNFE-KSKLTFSCLGGSD-N---FKHLNEIDLFHCIDPNDSKHKRTDRSILCC 76 (125)
T ss_dssp CCEEEEECSSEEEEEECCTTE--EEEEEEEE-TTEEEEEEEETTT-T---EEEEEEEEBSSCEEEEEEEEEECSSCEEEE
T ss_pred CceeEEeCCCEEEEEEEecCC--CceEEEEE-CCEEEEEEEeCCC-C---ceEEEEEEccceeccccCEEEECCCEEEEE
Confidence 389999999999999999995 68999998 9999998764221 1 247777899999999998888888889999
Q ss_pred EeCcCC
Q 026451 106 VPKRAK 111 (238)
Q Consensus 106 lPK~~~ 111 (238)
|.|..+
T Consensus 77 L~K~~~ 82 (125)
T 1ejf_A 77 LRKGES 82 (125)
T ss_dssp EEESST
T ss_pred EEECCC
Confidence 999753
No 24
>1wfi_A Nuclear distribution gene C homolog; NUDC, riken structural genomics/proteomics initiative, RSGI, structural genomics, transport protein; NMR {Mus musculus} SCOP: b.15.1.4
Probab=97.27 E-value=0.00058 Score=53.97 Aligned_cols=79 Identities=16% Similarity=0.141 Sum_probs=65.0
Q ss_pred cccceeEEEcCCeEEEEEEcC-C--CCCCCeEEEEEeCCeEEEEEEEeeecceEeeEEEEEEECCCCCccCCeeEEEeCC
Q 026451 24 FVPSSGWTEDSNGHYLLVDLP-D--FKKEQVKLQVDSSGNITVSGEMLTSDNRYIMRFEQMFPLPPNSDMDKISGKFDGE 100 (238)
Q Consensus 24 ~~P~~di~e~~d~~~l~vdLP-G--f~~edI~V~V~~~~~L~I~Ger~~~e~~~~r~F~r~~~LP~~vD~~~I~A~~~dG 100 (238)
-.|.|.|.++.+..+|.|.|| | +++++|.|.+. .+.|.|... +. .+.-...|...|+++.-+.++.+|
T Consensus 6 ~~~~y~W~Qt~~~V~i~I~lp~~~~~~~kdv~V~i~-~~~l~v~~k-----g~---~~~~~~~L~~~I~~e~s~w~i~~~ 76 (131)
T 1wfi_A 6 SGPNYRWTQTLAELDLAVPFRVSFRLKGKDVVVDIQ-RRHLRVGLK-----GQ---PPVVDGELYNEVKVEESSWLIEDG 76 (131)
T ss_dssp SCCSSEEEECSSEEEEEECCCCSSCCCTTSEEEEEE-TTEEEEEET-----TS---CCSBCSCBSSCBCSTTCEEEEETT
T ss_pred CCCcEEEEecCCEEEEEEECCCCCcccccceEEEEe-CCEEEEEEC-----Cc---eEEEecccccccccccCEEEEcCC
Confidence 358899999999999999999 6 89999999999 999999753 11 111234677889999988899988
Q ss_pred -EEEEEEeCcCC
Q 026451 101 -LLYVTVPKRAK 111 (238)
Q Consensus 101 -vL~ItlPK~~~ 111 (238)
.|.|+|-|...
T Consensus 77 k~v~i~L~K~~~ 88 (131)
T 1wfi_A 77 KVVTVHLEKINK 88 (131)
T ss_dssp TEEEEEEEBSSS
T ss_pred CEEEEEEEECCC
Confidence 89999999854
No 25
>3igf_A ALL4481 protein; two-domained protein consisting of the N-terminal alpha-beta the C-terminal all beta domain., structural genomics; 2.00A {Nostoc SP}
Probab=97.10 E-value=0.001 Score=61.52 Aligned_cols=70 Identities=23% Similarity=0.262 Sum_probs=56.2
Q ss_pred cceeEEEcCCeEEEEEEcCCCCCCCeEEEEEeCCeEEEEEEEeeecceEeeEEEEEEECCCCCcc-CCeeEEEeCCEEEE
Q 026451 26 PSSGWTEDSNGHYLLVDLPDFKKEQVKLQVDSSGNITVSGEMLTSDNRYIMRFEQMFPLPPNSDM-DKISGKFDGELLYV 104 (238)
Q Consensus 26 P~~di~e~~d~~~l~vdLPGf~~edI~V~V~~~~~L~I~Ger~~~e~~~~r~F~r~~~LP~~vD~-~~I~A~~~dGvL~I 104 (238)
+++.+... .|.+.+.||||++++|++.-. +.-|+|+. +.|+|.+.||....- .-..|+|+||.|+|
T Consensus 298 ~~~~i~~~--~~~~~l~lP~~~~~~~~l~~~-gdeL~v~~----------g~~rR~i~LP~~L~~~~v~~A~~~~~~L~i 364 (374)
T 3igf_A 298 KPITIDTH--NRQVRLFLPGFDKKQVKLTQY-GPEVTVEA----------GDQRRNIFLPPALSGRPITGAKFQNNYLII 364 (374)
T ss_dssp CSEEEETT--TTEEEEECTTCCGGGCEEEEE-TTEEEEEE----------TTEEEEEECCTTTTTCCEEEEEEETTEEEE
T ss_pred CCEEEEec--cEEEEEECCCCCHHHeEEEEE-CCeEEEEE----------CCEeecccCCHHHcCCCccccEEECCEEEE
Confidence 34554333 899999999999999999998 99999973 579999999986332 23458999999999
Q ss_pred EEeC
Q 026451 105 TVPK 108 (238)
Q Consensus 105 tlPK 108 (238)
++-.
T Consensus 365 ~~~~ 368 (374)
T 3igf_A 365 SFLE 368 (374)
T ss_dssp EECC
T ss_pred EEeh
Confidence 9853
No 26
>2cg9_X CO-chaperone protein SBA1; chaperone complex, HSP90, heat shock protein, ATP-binding, heat shock, nucleotide-binding, acetylation; HET: ATP; 3.1A {Saccharomyces cerevisiae}
Probab=96.68 E-value=0.00079 Score=53.73 Aligned_cols=84 Identities=13% Similarity=0.228 Sum_probs=60.3
Q ss_pred cccceeEEEcCCe-------EEEEEEcCCCCCCCeEEEEEeCCeEEEEEEEeeecc-eEeeEEEEEEECCCCCccCCeeE
Q 026451 24 FVPSSGWTEDSNG-------HYLLVDLPDFKKEQVKLQVDSSGNITVSGEMLTSDN-RYIMRFEQMFPLPPNSDMDKISG 95 (238)
Q Consensus 24 ~~P~~di~e~~d~-------~~l~vdLPGf~~edI~V~V~~~~~L~I~Ger~~~e~-~~~r~F~r~~~LP~~vD~~~I~A 95 (238)
..|.++|.++.+. .+|+|.||+.. ++.|.+. .+.|.|++......+ .-...|...+.|...||++.-+.
T Consensus 5 ~~p~~~W~Q~~~~~~~~k~~V~ltI~~~~~~--~~~V~~~-~~~l~~~~~~~~~~g~~~~~~y~~~l~L~~~Idpe~S~~ 81 (134)
T 2cg9_X 5 INPQVAWAQRSSTTDPERNYVLITVSIADCD--APELTIK-PSYIELKAQSKPHVGDENVHHYQLHIDLYKEIIPEKTMH 81 (134)
T ss_dssp ------CBCCCEEECCCSSEEEEECCCSSEE--SCCCCBC-SSEEEECCEEC-------CEEBCEEEECSSCCCSSSEEE
T ss_pred cCCCEEEEeCCCCcCCcCCEEEEEEEecCCC--ceEEEEE-CCEEEEEEecccccCCccCceEEEEEEChhhccccccEE
Confidence 4588999999877 99999999974 8888888 899999876532100 00125677789999999999888
Q ss_pred EEeCCE-EEEEEeCcC
Q 026451 96 KFDGEL-LYVTVPKRA 110 (238)
Q Consensus 96 ~~~dGv-L~ItlPK~~ 110 (238)
++.++. |.|+|.|..
T Consensus 82 ~v~~~~~vei~L~K~~ 97 (134)
T 2cg9_X 82 KVANGQHYFLKLYKKD 97 (134)
T ss_dssp EECCC--CEEEEEECS
T ss_pred EECCCEEEEEEEEECC
Confidence 888888 999999975
No 27
>2kmw_A Uncharacterized protein AT3G03773; protein structure initiative, center for eukaryotic structural genomics, CESG, structural genomics; NMR {Arabidopsis thaliana}
Probab=96.54 E-value=0.0045 Score=50.38 Aligned_cols=80 Identities=20% Similarity=0.312 Sum_probs=62.6
Q ss_pred cccceeEEEcCCeEEEEEEcCCCCCCCeEEEEEeCCeEEEEEEEeeecceEeeEEEEEEECCCCCccCCeeEEEeCCEEE
Q 026451 24 FVPSSGWTEDSNGHYLLVDLPDFKKEQVKLQVDSSGNITVSGEMLTSDNRYIMRFEQMFPLPPNSDMDKISGKFDGELLY 103 (238)
Q Consensus 24 ~~P~~di~e~~d~~~l~vdLPGf~~edI~V~V~~~~~L~I~Ger~~~e~~~~r~F~r~~~LP~~vD~~~I~A~~~dGvL~ 103 (238)
..|.++|+++.+..+|+|.|+++ +++.|.+.+.+.|.|++. ...+ ..|...+.|-..|+++ -+.+....-+.
T Consensus 3 ~~P~~~W~Qt~~~V~ltI~l~~~--~~v~V~~~~~~~l~~~~~--~~~~---~~y~~~l~L~~~Idpe-S~~~v~~~kIe 74 (150)
T 2kmw_A 3 RNPEVLWAQRSDKVYLTVALPDA--KDISVKCEPQGLFSFSAL--GAQG---ERFEFSLELYGKIMTE-YRKNVGLRNII 74 (150)
T ss_dssp ECCCEEEEECSSEEEEEECCSSE--EEEEECCCTTEEEEEEEE--TTTT---EEEEEEEEBSSCEEEE-EEEEEESSSEE
T ss_pred cCCcEEEEeCCCEEEEEEEeCCC--CceEEEEecCCEEEEEEE--cCCC---ceEEEEeEhhhccccc-ceEEecCCEEE
Confidence 35899999999999999999997 456666642478999986 2222 2567778898999999 77777788899
Q ss_pred EEEeCcCC
Q 026451 104 VTVPKRAK 111 (238)
Q Consensus 104 ItlPK~~~ 111 (238)
|+|.|..+
T Consensus 75 i~L~K~e~ 82 (150)
T 2kmw_A 75 FSIQKEER 82 (150)
T ss_dssp EEEEECCS
T ss_pred EEEEECCC
Confidence 99999753
No 28
>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A
Probab=73.32 E-value=6.5 Score=28.05 Aligned_cols=33 Identities=15% Similarity=0.168 Sum_probs=29.0
Q ss_pred EEEEEEECCCCCccCCeeEEEeCCEEEEEEeCcC
Q 026451 77 RFEQMFPLPPNSDMDKISGKFDGELLYVTVPKRA 110 (238)
Q Consensus 77 ~F~r~~~LP~~vD~~~I~A~~~dGvL~ItlPK~~ 110 (238)
.|.-.+.|| +++.+.|..++++|.|+|..-+..
T Consensus 8 ~~~v~~dlP-G~~~edi~V~v~~~~L~I~g~~~~ 40 (85)
T 3q9p_A 8 RWRVSLDVN-HFAPDELTVKTKDGVVEITGKHAA 40 (85)
T ss_dssp EEEEEEECT-TTCCSEEEEEEETTEEEEEEEEC-
T ss_pred EEEEEEECC-CCChHHEEEEEECCEEEEEEEEcc
Confidence 688999997 789999999999999999987654
No 29
>2y1y_A Alpha-crystallin B chain,; small heat shock protein, chaperone, stress protein, eye LEN protein, cataract; HET: MSE; 2.00A {Homo sapiens} PDB: 2y22_A 2wj7_A 3l1g_A 2y1z_A
Probab=71.57 E-value=6.3 Score=28.33 Aligned_cols=32 Identities=16% Similarity=0.225 Sum_probs=28.8
Q ss_pred EEEEEEECCCCCccCCeeEEEeCCEEEEEEeCc
Q 026451 77 RFEQMFPLPPNSDMDKISGKFDGELLYVTVPKR 109 (238)
Q Consensus 77 ~F~r~~~LP~~vD~~~I~A~~~dGvL~ItlPK~ 109 (238)
.|.-.+.|| +++.+.|..+++++.|+|..-+.
T Consensus 7 ~~~v~~dlP-G~~~edi~V~v~~~~L~I~g~~~ 38 (90)
T 2y1y_A 7 RFSVNLDVK-HFSPEELKVKVLGDVIEVHGKHE 38 (90)
T ss_dssp CEEEEEECT-TSCGGGEEEEEETTEEEEEEEEE
T ss_pred EEEEEEECC-CCcHHHeEEEEECCEEEEEEEEe
Confidence 688899998 89999999999999999998764
No 30
>3gla_A Low molecular weight heat shock protein; HSPA, SHP, SHSP, high resolution, stress response, chaperone; 1.64A {Xanthomonas axonopodis PV} PDB: 3gt6_A 3guf_A
Probab=69.84 E-value=8.3 Score=27.91 Aligned_cols=34 Identities=21% Similarity=0.334 Sum_probs=29.7
Q ss_pred EEEEEEECCCCCccCCeeEEEeCCEEEEEEeCcCC
Q 026451 77 RFEQMFPLPPNSDMDKISGKFDGELLYVTVPKRAK 111 (238)
Q Consensus 77 ~F~r~~~LP~~vD~~~I~A~~~dGvL~ItlPK~~~ 111 (238)
.|.-.+.|| +++.+.|+.+++++.|+|..-+...
T Consensus 15 ~~~v~~~lP-G~~~edi~v~~~~~~L~I~g~~~~~ 48 (100)
T 3gla_A 15 HFVLYADLP-GIDPSQIEVQMDKGILSIRGERKSE 48 (100)
T ss_dssp EEEEEEECT-TSCGGGCEEEEETTEEEEEEEECCG
T ss_pred EEEEEEECC-CCCHHHEEEEEECCEEEEEEEEcCc
Confidence 688889998 6899999999999999999877643
No 31
>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress response; 1.12A {Rattus norvegicus}
Probab=69.68 E-value=6.4 Score=29.00 Aligned_cols=32 Identities=19% Similarity=0.238 Sum_probs=29.0
Q ss_pred EEEEEEECCCCCccCCeeEEEeCCEEEEEEeCc
Q 026451 77 RFEQMFPLPPNSDMDKISGKFDGELLYVTVPKR 109 (238)
Q Consensus 77 ~F~r~~~LP~~vD~~~I~A~~~dGvL~ItlPK~ 109 (238)
.|.-.+.|| +++.+.|+.++++|.|+|..-+.
T Consensus 12 ~~~v~~dlP-G~~~edI~V~v~~~~L~I~g~~~ 43 (101)
T 2wj5_A 12 YFSVLLDVK-HFSPEEISVKVVGDHVEVHARHE 43 (101)
T ss_dssp CEEEEEECT-TSCGGGEEEEEETTEEEEEEEEE
T ss_pred EEEEEEECC-CCcHHHeEEEEECCEEEEEEEEe
Confidence 688899998 89999999999999999998775
No 32
>4fei_A Heat shock protein-related protein; stress response, alpha-crystallin domain fold, aggregates, C chaperone; 2.40A {Deinococcus radiodurans}
Probab=68.67 E-value=7.3 Score=28.59 Aligned_cols=32 Identities=19% Similarity=0.313 Sum_probs=28.8
Q ss_pred EEEEEEECCCCCccCCeeEEEeCCEEEEEEeCc
Q 026451 77 RFEQMFPLPPNSDMDKISGKFDGELLYVTVPKR 109 (238)
Q Consensus 77 ~F~r~~~LP~~vD~~~I~A~~~dGvL~ItlPK~ 109 (238)
.|.-.+.|| +++.+.|+.+++++.|+|+.-+.
T Consensus 17 ~~~v~~~lP-G~~~edi~v~~~~~~L~I~g~~~ 48 (102)
T 4fei_A 17 HLDLLLDVP-GVDAGTLALAEDGGQLTVSGERP 48 (102)
T ss_dssp EEEEEEECT-TCCGGGCEEEEETTEEEEEEEEC
T ss_pred EEEEEEECC-CCchHhEEEEEECCEEEEEEEEe
Confidence 688899998 88999999999999999998764
No 33
>3l1e_A Alpha-crystallin A chain; lens transparency, polydispersity, protein aggregation, CRYS eye lens protein, chaperone; 1.15A {Bos taurus} PDB: 3l1f_A 3n3e_A
Probab=67.90 E-value=8 Score=28.78 Aligned_cols=32 Identities=6% Similarity=0.186 Sum_probs=28.7
Q ss_pred EEEEEEECCCCCccCCeeEEEeCCEEEEEEeCc
Q 026451 77 RFEQMFPLPPNSDMDKISGKFDGELLYVTVPKR 109 (238)
Q Consensus 77 ~F~r~~~LP~~vD~~~I~A~~~dGvL~ItlPK~ 109 (238)
.|.-.+.|| +++.+.|..++++|.|+|..-+.
T Consensus 13 ~~~v~~dlP-G~~~edi~V~v~~~~L~I~g~~~ 44 (106)
T 3l1e_A 13 KFVIFLDVK-HFSPEDLTVKVQEDFVEIHGKHN 44 (106)
T ss_dssp EEEEEEECT-TSCGGGEEEEEETTEEEEEEEEE
T ss_pred EEEEEEECC-CCChHHEEEEEECCEEEEEEEEc
Confidence 788899998 78999999999999999998643
No 34
>3aab_A Putative uncharacterized protein ST1653; alpha-crystallin domain, chaperone; 1.85A {Sulfolobus tokodaii} PDB: 3aac_A
Probab=59.73 E-value=18 Score=27.22 Aligned_cols=34 Identities=15% Similarity=0.246 Sum_probs=29.8
Q ss_pred EEEEEEECCCCCccCCeeEEEeC-CEEEEEEeCcCC
Q 026451 77 RFEQMFPLPPNSDMDKISGKFDG-ELLYVTVPKRAK 111 (238)
Q Consensus 77 ~F~r~~~LP~~vD~~~I~A~~~d-GvL~ItlPK~~~ 111 (238)
.|.-.+.|| +++.+.|+.++.+ +.|+|..-+...
T Consensus 35 ~~~v~~~lP-G~~~edi~V~v~~~~~L~I~g~~~~~ 69 (123)
T 3aab_A 35 YLVVVADLA-GFNKEKIKARVSGQNELIIEAEREIT 69 (123)
T ss_dssp EEEEEEECC-SCCGGGCEEEEETTTEEEEEEECCCC
T ss_pred EEEEEEECC-CCCHHHEEEEEeCCCEEEEEEEEecc
Confidence 688889998 6899999999999 999999987653
No 35
>2cql_A OK/SW-CL.103, 60S ribosomal protein L9; N-terminal domain, alpha and beta (A+B), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.141.1.1
Probab=57.84 E-value=14 Score=27.69 Aligned_cols=46 Identities=17% Similarity=0.161 Sum_probs=30.4
Q ss_pred CCCeEEEEEeCCeEEEEEEEeeecceEeeEEEEEEECC-CCCccCCeeEEEeCCE---EEEEEeCc
Q 026451 48 KEQVKLQVDSSGNITVSGEMLTSDNRYIMRFEQMFPLP-PNSDMDKISGKFDGEL---LYVTVPKR 109 (238)
Q Consensus 48 ~edI~V~V~~~~~L~I~Ger~~~e~~~~r~F~r~~~LP-~~vD~~~I~A~~~dGv---L~ItlPK~ 109 (238)
|+.++|+++ ++.|+|+|.+ +...+ .|+ .. |...++++. |.|..|..
T Consensus 20 P~gV~V~i~-~~~VtVKGPk--------G~L~~--~~~h~~-----v~i~~e~~~~~~i~v~~~~~ 69 (100)
T 2cql_A 20 PENVDITLK-GRTVIVKGPR--------GTLRR--DFNHIN-----VELSLLGKKKKRLRVDKWWG 69 (100)
T ss_dssp CSSCEEEEE-TTEEEEEETT--------EEEEE--ECCSSC-----CEEEEECSSSCEEEEECCSS
T ss_pred CCCCEEEEe-CCEEEEECCC--------ceEEE--EeccCc-----EEEEEcCCceeEEEEEccCC
Confidence 678999999 9999999866 23333 333 22 455567665 77775543
No 36
>1rl6_A Protein (ribosomal protein L6); RNA-binding protein, gentamicin resistance, alpha/beta protein; 2.00A {Geobacillus stearothermophilus} SCOP: d.141.1.1 d.141.1.1 PDB: 1giy_H 1ml5_h* 1c04_B 1yl3_H 2b66_H 2b9n_H 2b9p_H 1eg0_J 487d_J
Probab=51.87 E-value=25 Score=28.96 Aligned_cols=46 Identities=24% Similarity=0.463 Sum_probs=33.4
Q ss_pred CCCeEEEEEeCCeEEEEEEEeeecceEeeEEEEEEECCCCCccCCeeEEEeCCEEEEEEeCc
Q 026451 48 KEQVKLQVDSSGNITVSGEMLTSDNRYIMRFEQMFPLPPNSDMDKISGKFDGELLYVTVPKR 109 (238)
Q Consensus 48 ~edI~V~V~~~~~L~I~Ger~~~e~~~~r~F~r~~~LP~~vD~~~I~A~~~dGvL~ItlPK~ 109 (238)
|+.++|+++ ++.|+|+|.+ +...+.| +.. |....+|+.|.|+.|..
T Consensus 11 P~gV~V~i~-~~~VtVkGpk--------G~L~~~~--~~~-----v~i~~~~~~l~v~~~~~ 56 (177)
T 1rl6_A 11 PAGVTVTVN-GNTVTVKGPK--------GELTRTF--HPD-----MTITVEGNVITVTRPSD 56 (177)
T ss_dssp CTTCEEEEE-TTEEEEEETT--------EEEEEEC--CTT-----CEEEEETTEEEEECSCC
T ss_pred CCCCEEEEe-CCEEEEECCC--------eEEEEEc--CCC-----EEEEEeCCEEEEEcCCC
Confidence 678999999 9999999866 3444444 443 44557899998886654
No 37
>1nkw_E 50S ribosomal protein L6; ribosome, large subunit, X- RAY structure, peptidyl-transferase, peptide bond formation; 3.10A {Deinococcus radiodurans} SCOP: i.1.1.2 PDB: 1sm1_E*
Probab=51.75 E-value=29 Score=29.50 Aligned_cols=46 Identities=20% Similarity=0.335 Sum_probs=32.7
Q ss_pred CCCeEEEEEeCCeEEEEEEEeeecceEeeEEEEEEECCCCCccCCeeEEEeCCEEEEEEeCc
Q 026451 48 KEQVKLQVDSSGNITVSGEMLTSDNRYIMRFEQMFPLPPNSDMDKISGKFDGELLYVTVPKR 109 (238)
Q Consensus 48 ~edI~V~V~~~~~L~I~Ger~~~e~~~~r~F~r~~~LP~~vD~~~I~A~~~dGvL~ItlPK~ 109 (238)
|+.|+|+++ ++.|+|+|.+ +...+.| +.. |....+||.|.|+.+..
T Consensus 39 P~gV~V~i~-~~~VtVKGPk--------G~L~~~~--~~~-----v~i~~e~~~i~v~~~~~ 84 (212)
T 1nkw_E 39 PSGVTVNAQ-DGVFKVKGPK--------GELTVPY--NTE-----LTVRQDGDQLLVERPSD 84 (212)
T ss_pred CCCcEEEEe-CCEEEEECCC--------EEEEEEC--CCC-----eEEEEECCEEEEEcCCC
Confidence 578899999 9999999876 3444444 433 44456889988886554
No 38
>4eld_A MJ16.5-P1, small heat shock protein HSP16.5; chaperone; 2.70A {Methanocaldococcus jannaschii} PDB: 1shs_A
Probab=49.29 E-value=42 Score=26.45 Aligned_cols=34 Identities=15% Similarity=0.172 Sum_probs=29.4
Q ss_pred EEEEEEECCCCCccCCeeEEEeCCEEEEEEeCcCC
Q 026451 77 RFEQMFPLPPNSDMDKISGKFDGELLYVTVPKRAK 111 (238)
Q Consensus 77 ~F~r~~~LP~~vD~~~I~A~~~dGvL~ItlPK~~~ 111 (238)
.|.-.+.|| +++.+.|+.++++|.|+|+.-+...
T Consensus 67 ~~~v~~dlP-G~~~edi~V~~~~~~L~I~g~~~~~ 100 (161)
T 4eld_A 67 HIKVIAWLP-GVNKEDIILNAVGDTLEIRAKRSPL 100 (161)
T ss_dssp EEEEEEECT-TCCGGGEEEEEETTEEEEEEECCCC
T ss_pred EEEEEEECC-CCChHhEEEEEECCEEEEEEEEccc
Confidence 678888997 6899999999999999999887653
No 39
>2klr_A Alpha-crystallin B chain; protein, dimer, oligomer, heterogeneity, intermolecular INTE chaperone, SHSP, human, small heat-shock protein, cataract; NMR {Homo sapiens} PDB: 2ygd_A
Probab=48.79 E-value=19 Score=29.36 Aligned_cols=32 Identities=16% Similarity=0.225 Sum_probs=28.9
Q ss_pred EEEEEEECCCCCccCCeeEEEeCCEEEEEEeCc
Q 026451 77 RFEQMFPLPPNSDMDKISGKFDGELLYVTVPKR 109 (238)
Q Consensus 77 ~F~r~~~LP~~vD~~~I~A~~~dGvL~ItlPK~ 109 (238)
.|.-.+.|| +++.+.|+.++++|.|+|..-+.
T Consensus 74 ~~~v~~dlP-G~~~edI~V~v~~~~L~I~g~~~ 105 (175)
T 2klr_A 74 RFSVNLDVK-HFSPEELKVKVLGDVIEVHGKHE 105 (175)
T ss_dssp EEEEEECCS-SCCGGGEEEEEETTEEEEEEEEE
T ss_pred eEEEEEECC-CCChHHEEEEEECCEEEEEEEEc
Confidence 788899998 89999999999999999998664
No 40
>1gme_A Heat shock protein 16.9B; small heat shock protein, chaperone, alpha-crystallin; 2.70A {Triticum aestivum} SCOP: b.15.1.1 PDB: 2h50_A 2h53_A 2byu_A
Probab=47.36 E-value=32 Score=27.06 Aligned_cols=34 Identities=15% Similarity=0.246 Sum_probs=28.8
Q ss_pred EEEEEEECCCCCccCCeeEEEe-CCEEEEEEeCcCC
Q 026451 77 RFEQMFPLPPNSDMDKISGKFD-GELLYVTVPKRAK 111 (238)
Q Consensus 77 ~F~r~~~LP~~vD~~~I~A~~~-dGvL~ItlPK~~~ 111 (238)
.|.-.+.|| +++.+.|+..+. ++.|+|..-+...
T Consensus 54 ~~~v~~dlP-Gv~kedI~V~v~~~~~L~I~g~~~~~ 88 (151)
T 1gme_A 54 AHVFKADLP-GVKKEEVKVEVEDGNVLVVSGERTKE 88 (151)
T ss_dssp EEEEEEECT-TCCGGGEEEEEETTTEEEEEECCCCC
T ss_pred EEEEEEECC-CCChHHEEEEEecCCEEEEEEEEccc
Confidence 678888998 789999999995 6799999877654
No 41
>1vq8_E 50S ribosomal protein L6P; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: d.141.1.1 d.141.1.1 PDB: 1vq4_E* 1vq5_E* 1vq6_E* 1vq7_E* 1s72_E* 1vq9_E* 1vqk_E* 1vql_E* 1vqm_E* 1vqn_E* 1vqo_E* 1vqp_E* 1yhq_E* 1yi2_E* 1yij_E* 1yit_E* 1yj9_E* 1yjn_E* 1yjw_E* 2otj_E* ...
Probab=46.57 E-value=32 Score=28.45 Aligned_cols=47 Identities=23% Similarity=0.307 Sum_probs=33.0
Q ss_pred CCCeEEEEEeCCeEEEEEEEeeecceEeeEEEEEEECCCCCccCCeeEEEeCCEEEEEEeCc
Q 026451 48 KEQVKLQVDSSGNITVSGEMLTSDNRYIMRFEQMFPLPPNSDMDKISGKFDGELLYVTVPKR 109 (238)
Q Consensus 48 ~edI~V~V~~~~~L~I~Ger~~~e~~~~r~F~r~~~LP~~vD~~~I~A~~~dGvL~ItlPK~ 109 (238)
|+.++|+++ ++.|+|+|.+ +...+.|. +.. +...++||.|.|..|..
T Consensus 9 P~gV~v~i~-~~~vtVkGpk--------G~L~~~~~-~~~-----v~i~~~~~~i~v~~~~~ 55 (178)
T 1vq8_E 9 PEDVDAEQD-HLDITVEGDN--------GSVTRRLW-YPD-----IDVSVDGDTVVIESDED 55 (178)
T ss_dssp CTTCEEEEE-TTEEEEEETT--------EEEEEECC-CTT-----CEEEEETTEEEEECSCC
T ss_pred CCCCEEEEe-CCEEEEECCC--------eEEEEEEE-CCe-----EEEEEECCEEEEEcCCC
Confidence 578999999 9999999866 23444442 333 44557899998886654
No 42
>3j21_F 50S ribosomal protein L6P; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=42.53 E-value=25 Score=29.14 Aligned_cols=45 Identities=20% Similarity=0.211 Sum_probs=31.1
Q ss_pred CCCeEEEEEeCCeEEEEEEEeeecceEeeEEEEEEECCCCCccCCeeEEEeCCEEEEEEe
Q 026451 48 KEQVKLQVDSSGNITVSGEMLTSDNRYIMRFEQMFPLPPNSDMDKISGKFDGELLYVTVP 107 (238)
Q Consensus 48 ~edI~V~V~~~~~L~I~Ger~~~e~~~~r~F~r~~~LP~~vD~~~I~A~~~dGvL~ItlP 107 (238)
|+.++|+++ ++.++|+|.+ +.-.+.|.- .+ ++..++++.|.|..+
T Consensus 14 P~gV~v~i~-~~~V~VkGpk--------G~L~~~~~~-~~-----v~i~~~~~~l~v~~~ 58 (184)
T 3j21_F 14 PEGVEVTVE-GYKVKVKGPK--------GELEREFFW-PG-----IQIFTEDGNVVIYKD 58 (184)
T ss_dssp CSSCEEEES-SSEEEEECSS--------CEEEEECCC-TT-----CEEEEETTEEEEECS
T ss_pred CCCcEEEEe-CCEEEEEcCC--------eEEEEEecC-Cc-----EEEEEeCCEEEEEEC
Confidence 588999998 9999999866 234444432 22 444578899888753
No 43
>2j5d_A BNIP3 TM, BCL2/adenovirus E1B 19 kDa protein-interacting protein 3; membrane protein, mitochondrion, transmembrane, transmembrane domain, membrane; NMR {Homo sapiens} PDB: 2ka1_A 2ka2_A
Probab=41.29 E-value=12 Score=24.34 Aligned_cols=21 Identities=24% Similarity=0.703 Sum_probs=17.1
Q ss_pred CchhhHHHHHHHHHHhhhhcC
Q 026451 210 GIIITAVLAFSLGVLLSRKFG 230 (238)
Q Consensus 210 ~~~~~~v~~~~l~~~~~~~~~ 230 (238)
-+++.-+|+++||+|+++...
T Consensus 23 sll~shiL~~GlgIyIGkRLs 43 (45)
T 2j5d_A 23 SLLLSHLLAIGLGIYIGRRLT 43 (45)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcceEEeeeeec
Confidence 356688999999999998654
No 44
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=39.69 E-value=15 Score=23.86 Aligned_cols=22 Identities=32% Similarity=0.694 Sum_probs=16.8
Q ss_pred CchhhHHHHHHHHHHhhhhcCC
Q 026451 210 GIIITAVLAFSLGVLLSRKFGS 231 (238)
Q Consensus 210 ~~~~~~v~~~~l~~~~~~~~~~ 231 (238)
|+++.+++++++++|+=|+-..
T Consensus 20 Gvll~vi~~l~~~~~~RRR~~~ 41 (44)
T 2jwa_A 20 GILLVVVLGVVFGILIKRRQQK 41 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHCSC
T ss_pred HHHHHHHHHHHHHhheehhhhh
Confidence 3668888899999998876443
No 45
>3v2d_H 50S ribosomal protein L6; ribosome associated inhibitor A, RAIA, protein Y, stress RES stationary phase, ribosome hibernation, ribosome; 2.70A {Thermus thermophilus} PDB: 1vsp_F 2hgj_H 2hgq_H 2hgu_H 1vsa_F 2j03_H 2jl6_H 2jl8_H 2v47_H 2v49_H 2wdi_H 2wdj_H 2wdl_H 2wdn_H 2wh2_H 2wh4_H 2wrj_H 2wrl_H 2wro_H 2wrr_H ...
Probab=36.59 E-value=43 Score=27.56 Aligned_cols=44 Identities=20% Similarity=0.357 Sum_probs=31.2
Q ss_pred CCCeEEEEEeCCeEEEEEEEeeecceEeeEEEEEEECCCCCccCCeeEEEeCCEEEEEEe
Q 026451 48 KEQVKLQVDSSGNITVSGEMLTSDNRYIMRFEQMFPLPPNSDMDKISGKFDGELLYVTVP 107 (238)
Q Consensus 48 ~edI~V~V~~~~~L~I~Ger~~~e~~~~r~F~r~~~LP~~vD~~~I~A~~~dGvL~ItlP 107 (238)
|+.++|+++ ++.|+|+|-+ +...+. |+.. |...++++.|.|..+
T Consensus 12 P~gV~v~i~-~~~v~VkGpk--------G~L~~~--~~~~-----v~i~~~~~~l~v~~~ 55 (180)
T 3v2d_H 12 PKGVSVEVA-PGRVKVKGPK--------GELEVP--VSPE-----MRVVVEEGVVRVERP 55 (180)
T ss_dssp CTTCEEEEE-TTEEEEECSS--------CEEEEE--CCTT-----SEEEEETTEEEEECS
T ss_pred CCCcEEEEe-CCEEEEEeCC--------cEEEEE--eCCC-----EEEEEECCEEEEEEC
Confidence 688999998 9999999866 234443 3433 444567999988753
No 46
>3iz5_F 60S ribosomal protein L9 (L6P); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_F
Probab=34.00 E-value=66 Score=26.70 Aligned_cols=46 Identities=26% Similarity=0.261 Sum_probs=31.3
Q ss_pred CCCeEEEEEeCCeEEEEEEEeeecceEeeEEEEEEECCCCCccCCeeEEE--eCCEEEEEEeC
Q 026451 48 KEQVKLQVDSSGNITVSGEMLTSDNRYIMRFEQMFPLPPNSDMDKISGKF--DGELLYVTVPK 108 (238)
Q Consensus 48 ~edI~V~V~~~~~L~I~Ger~~~e~~~~r~F~r~~~LP~~vD~~~I~A~~--~dGvL~ItlPK 108 (238)
|+.++|+++ ++.++|+|.+ |.-.+.|. +.. +...+ +++.|.|..+-
T Consensus 13 P~gV~v~i~-~~~V~VkGPk--------G~L~~~~~-~~~-----v~i~~~~~~~~l~v~~~~ 60 (190)
T 3iz5_F 13 PEGVTVQVA-AKVVTVEGPR--------GKLTRNFK-HLN-----LDFQLLEGGRKLQVDAWF 60 (190)
T ss_dssp CTTCEEEEE-TTEEEEEETT--------EEEEEECC-CTT-----EEEEEETTTTEEEEEESC
T ss_pred CCCCEEEEe-CCEEEEECCC--------ceEEEEcc-CCc-----EEEEEEcCCCEEEEEECC
Confidence 688999998 9999999866 23344332 122 34455 78899998654
No 47
>3u5e_H L8, RP24, YL11, 60S ribosomal protein L9-A; translation, ribosome, ribosomal R ribosomal protein, STM1, eukaryotic ribosome; 3.00A {Saccharomyces cerevisiae} PDB: 3izc_F 1s1i_H 3izs_F* 3j16_F 3o5h_I 3o58_I 3u5i_H 4b6a_H 3jyw_H
Probab=32.00 E-value=78 Score=26.27 Aligned_cols=46 Identities=20% Similarity=0.246 Sum_probs=31.3
Q ss_pred CCCeEEEEEeCCeEEEEEEEeeecceEeeEEEEEEECCCCCccCCeeEE-EeCCEEEEEEeC
Q 026451 48 KEQVKLQVDSSGNITVSGEMLTSDNRYIMRFEQMFPLPPNSDMDKISGK-FDGELLYVTVPK 108 (238)
Q Consensus 48 ~edI~V~V~~~~~L~I~Ger~~~e~~~~r~F~r~~~LP~~vD~~~I~A~-~~dGvL~ItlPK 108 (238)
|+.++|+++ ++.++|+|.+ |.-.+. |+. . .+.-. .+++.|.|..+-
T Consensus 13 P~gV~v~i~-~~~V~VkGPk--------G~L~~~--~~~-~---~v~i~~~~~~~l~v~~~~ 59 (191)
T 3u5e_H 13 PEGVTVSIK-SRIVKVVGPR--------GTLTKN--LKH-I---DVTFTKVNNQLIKVAVHN 59 (191)
T ss_dssp CTTCEEEEE-TTEEEEEETT--------EEEEEE--CTT-T---CCEEEEEETTEEEEEEEE
T ss_pred CCCcEEEEe-CCEEEEEcCC--------eEEEEE--ccC-C---cEEEEEecCCeEEEEECC
Confidence 689999998 9999999866 234443 332 1 23334 458999998654
No 48
>3arc_L Photosystem II reaction center protein L; PSII, membrane-protein complex, transmembrane alpha-helix, E transport, photosynthesis; HET: OEX CLA PHO BCR PL9 SQD LMG UNL LMT HTG DGD LHG HEM; 1.90A {Thermosynechococcus vulcanus} PDB: 1s5l_L* 3a0b_L* 3a0h_L* 2axt_L* 3bz1_L* 3bz2_L* 3kzi_L* 3prq_L* 3prr_L*
Probab=31.30 E-value=28 Score=21.59 Aligned_cols=16 Identities=31% Similarity=0.478 Sum_probs=12.3
Q ss_pred hHHHHHHHHHHhhhhc
Q 026451 214 TAVLAFSLGVLLSRKF 229 (238)
Q Consensus 214 ~~v~~~~l~~~~~~~~ 229 (238)
..+|.|+|+++.|++|
T Consensus 20 GLLlifvlavlFssyf 35 (37)
T 3arc_L 20 GLLLILVLALLFSSYF 35 (37)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhhc
Confidence 5567788888888876
No 49
>2zkr_e 60S ribosomal protein L9; protein-RNA complex, 60S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris}
Probab=28.56 E-value=61 Score=26.92 Aligned_cols=53 Identities=13% Similarity=0.043 Sum_probs=34.0
Q ss_pred EcCCCCCCCeEEEEEeCCeEEEEEEEeeecceEeeEEEEEEECCCCCccCCeeEEEeCCE---EEEEEeCc
Q 026451 42 DLPDFKKEQVKLQVDSSGNITVSGEMLTSDNRYIMRFEQMFPLPPNSDMDKISGKFDGEL---LYVTVPKR 109 (238)
Q Consensus 42 dLPGf~~edI~V~V~~~~~L~I~Ger~~~e~~~~r~F~r~~~LP~~vD~~~I~A~~~dGv---L~ItlPK~ 109 (238)
..|=-=|+.++|+++ ++.|+|+|.+ |...+. ||.- .|....++|. |.|+.|..
T Consensus 7 k~pI~IP~gV~V~i~-~~~VtVkGpk--------G~L~~~--~~~~----~v~i~~~~~~~~~i~v~~~~~ 62 (192)
T 2zkr_e 7 NQTVDIPENVDITLK-GRTVIVKGPR--------GTLRRD--FNHI----NVELSLLGKKKKRLRVDKWWG 62 (192)
T ss_dssp ---CCCCTTCEEEEE-TTEEEEEETT--------EEEEEE--CCSS----SCEEEEETTTTCEEEEECSCC
T ss_pred cCcEEcCCCCEEEEe-CCEEEEECCC--------eEEEEE--eCCC----CEEEEEecCceeEEEEEcCCC
Confidence 334445789999999 9999999866 234443 3331 3445677887 88876554
No 50
>1zo0_A ODC-AZ, ornithine decarboxylase antizyme; ornithine decarboxylase inhibitor, lyase inhibitor; NMR {Rattus norvegicus} SCOP: d.108.1.7
Probab=28.41 E-value=1.4e+02 Score=23.29 Aligned_cols=55 Identities=20% Similarity=0.274 Sum_probs=35.7
Q ss_pred eCCeEEEEEEEeeecceEeeEEEEEEECCCCCccCCeeEEEeCCEEEEEEeCcCCccC
Q 026451 57 SSGNITVSGEMLTSDNRYIMRFEQMFPLPPNSDMDKISGKFDGELLYVTVPKRAKEES 114 (238)
Q Consensus 57 ~~~~L~I~Ger~~~e~~~~r~F~r~~~LP~~vD~~~I~A~~~dGvL~ItlPK~~~~~~ 114 (238)
+|++|+|.-+ ....++-. .+.-.+.|.++.. ..-.+-+.++.|+|.||.....+.
T Consensus 4 sd~~L~V~ee-~~~n~~~~-~L~F~~~lTe~~~-~~W~~Vl~~~~Lyv~iP~~~~~~g 58 (126)
T 1zo0_A 4 SDERLNVTEE-PTSNDKTR-VLSIQCTLTEAKQ-VTWRAVWNGGGLYIELPAGPLPEG 58 (126)
T ss_dssp ECSSEEEEEE-CCTTSSCE-EEEEEECCTTSCC-EEEEEEEETTEEEEECSSCCCSSC
T ss_pred ccCeeEEEee-cCCCCCce-EEEEEEEecCCCc-ceEEEEEeCCeEEEEcCCcccccc
Confidence 4899999987 33333322 3444566666653 344566789999999998765443
No 51
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=27.39 E-value=31 Score=22.25 Aligned_cols=20 Identities=20% Similarity=0.659 Sum_probs=12.0
Q ss_pred CchhhHHHHHHHHHHhhhhc
Q 026451 210 GIIITAVLAFSLGVLLSRKF 229 (238)
Q Consensus 210 ~~~~~~v~~~~l~~~~~~~~ 229 (238)
|+++.++|++++.+|+-++-
T Consensus 20 Gv~~~~ii~~~~~~~~RRr~ 39 (44)
T 2ks1_B 20 ALLLLLVVALGIGLFMRRRH 39 (44)
T ss_dssp HHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHHhhhhH
Confidence 35556666666666666543
No 52
>3oeq_A Frataxin homolog, mitochondrial; alpha/beta sandwich, metallochaperone, iron-storage, transpo protein; 2.96A {Saccharomyces cerevisiae} SCOP: d.82.2.1 PDB: 2fql_A 3oer_A 2ga5_A
Probab=26.92 E-value=46 Score=25.94 Aligned_cols=17 Identities=6% Similarity=0.151 Sum_probs=14.8
Q ss_pred eeEEEeCCEEEEEEeCc
Q 026451 93 ISGKFDGELLYVTVPKR 109 (238)
Q Consensus 93 I~A~~~dGvL~ItlPK~ 109 (238)
+.+.+.+|||+|+++..
T Consensus 49 ~Dve~~~gVLti~f~~~ 65 (123)
T 3oeq_A 49 PDVELSHGVMTLEIPAF 65 (123)
T ss_dssp CEEEECSSEEEEECTTT
T ss_pred eEEEccCCEEEEEECCC
Confidence 78889999999999843
No 53
>1ew4_A CYAY protein; friedreich ataxia, frataxin family, iron homeostasis, unknown function; 1.40A {Escherichia coli} SCOP: d.82.2.1 PDB: 2eff_A 2p1x_A 1soy_A
Probab=26.77 E-value=36 Score=25.65 Aligned_cols=18 Identities=22% Similarity=0.410 Sum_probs=15.1
Q ss_pred CeeEEEeCCEEEEEEeCc
Q 026451 92 KISGKFDGELLYVTVPKR 109 (238)
Q Consensus 92 ~I~A~~~dGvL~ItlPK~ 109 (238)
.+.+.+.+|||+|+++..
T Consensus 29 d~D~e~~~gVLti~f~~~ 46 (106)
T 1ew4_A 29 DIDCEINGGVLTITFENG 46 (106)
T ss_dssp CCEEEEETTEEEEECTTS
T ss_pred CEeeeccCCEEEEEECCC
Confidence 377889999999999743
No 54
>2o30_A Nuclear movement protein; MCSG, structural genomics, PSI-2, structure initiative; 1.66A {Encephalitozoon cuniculi}
Probab=22.70 E-value=99 Score=23.44 Aligned_cols=30 Identities=20% Similarity=0.349 Sum_probs=23.4
Q ss_pred EEEEEEECCCCCccCCeeEEEeCCEEEEEE
Q 026451 77 RFEQMFPLPPNSDMDKISGKFDGELLYVTV 106 (238)
Q Consensus 77 ~F~r~~~LP~~vD~~~I~A~~~dGvL~Itl 106 (238)
...-.|.||.+++...+...|...-|.|.+
T Consensus 15 ~V~i~I~lp~~~~~kdv~V~i~~~~l~v~~ 44 (131)
T 2o30_A 15 EINIQFPVTGDADSSAIKIRMVGKKICVKN 44 (131)
T ss_dssp EEEEEEECC---CCSCEEEEEETTEEEEEE
T ss_pred EEEEEEECCCCCCccceEEEEECCEEEEEE
Confidence 456678999999999999999999999987
No 55
>3bbo_I Ribosomal protein L6; large ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea}
Probab=22.30 E-value=22 Score=30.47 Aligned_cols=48 Identities=15% Similarity=0.287 Sum_probs=32.2
Q ss_pred CCCCeEEEEEeCCeEEEEEEEeeecceEeeEEEEEEECCCCCccCCeeEEEeCCEEEEEEeCc
Q 026451 47 KKEQVKLQVDSSGNITVSGEMLTSDNRYIMRFEQMFPLPPNSDMDKISGKFDGELLYVTVPKR 109 (238)
Q Consensus 47 ~~edI~V~V~~~~~L~I~Ger~~~e~~~~r~F~r~~~LP~~vD~~~I~A~~~dGvL~ItlPK~ 109 (238)
=|+.|+|+++ ++.|+|+|.+. ...+ .|+..+++. ..+||.|.|+.+..
T Consensus 53 IP~gV~V~i~-~~~VtVKGPkG--------~L~~--~~~~~v~i~----~~e~~~i~v~~~~~ 100 (223)
T 3bbo_I 53 VPSNVTIALE-GQDLKVKGPLG--------ELAL--TYPREVELT----KEESGFLRVKKTVE 100 (223)
T ss_dssp CSTTSCEEES-SSEEEECCSSC--------CEEE--ECCSSCEEE----ECSSSCEEEECSSC
T ss_pred cCCCCEEEEe-CCEEEEECCCe--------EEEE--EcCCCEEEE----EecCCEEEEEcCCC
Confidence 3578899998 99999998662 3333 335444331 45789988886654
No 56
>1iij_A ERBB-2 receptor protein-tyrosine kinase; alpha-helix-PI-bulge-alpha-helix, signaling protein; NMR {Synthetic} SCOP: j.35.1.1
Probab=22.07 E-value=14 Score=22.88 Aligned_cols=18 Identities=28% Similarity=0.765 Sum_probs=12.4
Q ss_pred CchhhHHHHHHHHHHhhh
Q 026451 210 GIIITAVLAFSLGVLLSR 227 (238)
Q Consensus 210 ~~~~~~v~~~~l~~~~~~ 227 (238)
|+++..+|++++|+|+-|
T Consensus 16 glll~vii~l~~~~~iRR 33 (35)
T 1iij_A 16 GVLLFLILVVVVGILIKR 33 (35)
T ss_dssp HHHHHHHHTTTTTHHHHH
T ss_pred HHHHHHHHHHHhheEEee
Confidence 355677777777887755
No 57
>2ks0_A Uncharacterized protein; YABP family, structural genomi 2, protein structure initiative, northeast structural genom consortium; NMR {Desulfitobacterium hafniense} PDB: 2kyi_A 3ipf_A
Probab=21.59 E-value=40 Score=23.82 Aligned_cols=25 Identities=20% Similarity=0.484 Sum_probs=20.6
Q ss_pred EcCCCCCCCeEEEEEeCCeEEEEEEE
Q 026451 42 DLPDFKKEQVKLQVDSSGNITVSGEM 67 (238)
Q Consensus 42 dLPGf~~edI~V~V~~~~~L~I~Ger 67 (238)
+|=-|+.++|.+.+. -|.|.|+|+.
T Consensus 14 ~V~sFd~e~i~L~T~-~G~L~IkG~~ 38 (71)
T 2ks0_A 14 KVQSFDPKEILLETI-QGVLSIKGEK 38 (71)
T ss_dssp EEEEECSSEEEEEET-TEEEEEEEEC
T ss_pred CEEEECCCEEEEEeC-ceEEEEEcCC
Confidence 334578899999998 9999999965
No 58
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=21.49 E-value=46 Score=21.43 Aligned_cols=20 Identities=25% Similarity=0.579 Sum_probs=12.5
Q ss_pred CchhhHHHHHHHHHHhhhhc
Q 026451 210 GIIITAVLAFSLGVLLSRKF 229 (238)
Q Consensus 210 ~~~~~~v~~~~l~~~~~~~~ 229 (238)
|+++.++|++++.+|+-++-
T Consensus 19 Gv~~v~ii~~~~~~~~RRRr 38 (44)
T 2l2t_A 19 GLFILVIVGLTFAVYVRRKS 38 (44)
T ss_dssp HHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHhhhhh
Confidence 45556667766667766543
No 59
>1n91_A ORF, hypothetical protein; alpha+beta, northeast structural genomics consortium, PSI, P structure initiative, NESG; NMR {Escherichia coli} SCOP: d.206.1.1 PDB: 1yh5_A
Probab=20.20 E-value=1.5e+02 Score=22.43 Aligned_cols=39 Identities=13% Similarity=0.244 Sum_probs=30.0
Q ss_pred EEEcCCeEEEEEEc-CCCCCCCeEEEEEeCCeEEEEEEEeee
Q 026451 30 WTEDSNGHYLLVDL-PDFKKEQVKLQVDSSGNITVSGEMLTS 70 (238)
Q Consensus 30 i~e~~d~~~l~vdL-PGf~~edI~V~V~~~~~L~I~Ger~~~ 70 (238)
|...++.+.|.+.+ ||-+++.| +.+. ++.|.|.-.-...
T Consensus 8 ~~~~~~~v~l~v~V~P~A~r~~I-~g~~-~~~LkV~v~ApP~ 47 (108)
T 1n91_A 8 VTVNDDGLVLRLYIQPKASRDSI-VGLH-GDEVKVAITAPPV 47 (108)
T ss_dssp EEECSSEEEEEEEEECSSSSCEE-EEEC-SSCEEEECCCCSS
T ss_pred EEECCCeEEEEEEEeeCCCccee-eccc-CCEEEEEEecCCC
Confidence 46678899999998 89999987 4566 7888887655444
Done!