BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>026455
MTSSENLPSVDAWSFRAAFADSWLSEAYARDTETLTKALQKTFSNNNNNNNNSNDITYSV
TETLACDFTPPFVAPETPTVSNVSGSDPETLPKRQRTAAVGGPNSGKITKRKARASKKTQ
TTFITADPANFRQMVQQVTGVRFGSAQVAMAPVLKPEPQRPGGRLHGIGGGSLPTLDTSA
FLLDHHQQLGQAPGAGVGSVLGSGHFDFQTSLVCDGASTGLEFDALSNFPTLESWKVM

High Scoring Gene Products

Symbol, full name Information P value
AT3G56880 protein from Arabidopsis thaliana 2.8e-41
CAMBP25
AT2G41010
protein from Arabidopsis thaliana 7.4e-34
AT4G15120 protein from Arabidopsis thaliana 5.8e-05
AT3G22160 protein from Arabidopsis thaliana 7.8e-05

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  026455
        (238 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2103590 - symbol:AT3G56880 "AT3G56880" species...   438  2.8e-41   1
TAIR|locus:2063265 - symbol:CAMBP25 "AT2G41010" species:3...   368  7.4e-34   1
TAIR|locus:2129700 - symbol:AT4G15120 "AT4G15120" species...   113  5.8e-05   1
TAIR|locus:2090389 - symbol:AT3G22160 "AT3G22160" species...   112  7.8e-05   1


>TAIR|locus:2103590 [details] [associations]
            symbol:AT3G56880 "AT3G56880" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AL390921
            InterPro:IPR008889 Pfam:PF05678 UniGene:At.23094
            HOGENOM:HOG000090723 ProtClustDB:CLSN2683656 EMBL:AY045980
            EMBL:BT000977 IPI:IPI00517353 PIR:T51276 RefSeq:NP_191247.1
            UniGene:At.73992 IntAct:Q9LES0 STRING:Q9LES0 DNASU:824855
            EnsemblPlants:AT3G56880.1 GeneID:824855 KEGG:ath:AT3G56880
            TAIR:At3g56880 eggNOG:NOG295211 InParanoid:Q9LES0 OMA:HRSISTS
            PhylomeDB:Q9LES0 ArrayExpress:Q9LES0 Genevestigator:Q9LES0
            Uniprot:Q9LES0
        Length = 245

 Score = 438 (159.2 bits), Expect = 2.8e-41, P = 2.8e-41
 Identities = 116/256 (45%), Positives = 147/256 (57%)

Query:     1 MTSSENLPSVDAWSFRAAF-ADSWL-SEAYARDTETLTKALQKTFXXXXXXXXXXXDITY 58
             M SSE L SVD WSFR  F  DSWL S++++ D++ L KAL ++               +
Sbjct:     1 MASSEGLASVDPWSFRQNFNIDSWLLSDSFSHDSDILAKALHRSISTSTESSPLSPSSFF 60

Query:    59 SVTETLACDFTPPFVAPETPTVSNVS-GSDPET-------LPKRQRTAAVGGPNSGKITK 110
               + T A DF+PP       T+SNVS GSDPE        L KR+R   V G   GK TK
Sbjct:    61 D-SSTAAVDFSPP------QTLSNVSFGSDPEIPAASALGLGKRKRGPGVSG---GKQTK 110

Query:   111 RKARAS-KKTQTTFITADPANFRQMVQQVTGVRF-GSAQVAMAPVLKPEPQR-----PXX 163
             R++R S KK+QTTFITAD ANFRQMVQQVTG +F GS+    AP++KPEP R     P  
Sbjct:   111 RRSRVSNKKSQTTFITADAANFRQMVQQVTGAKFLGSSNSIFAPIVKPEPHRLASRLPPS 170

Query:   164 XXXXXXXXSLPTLDTSAFLLDHHQQ-LGQAPGAGVGSVLGSGHFDFQTSLVCDGASTGLE 222
                     ++PTLDTS+FL +HHQ+ +    GA  GS          T+ V  G S+ +E
Sbjct:   171 CGNLDRSSAVPTLDTSSFLSNHHQENIITDLGAPTGSFHHQSSAGTTTANV-GGGSSAVE 229

Query:   223 FDALSNFPTLESWKVM 238
              D+  +FPTLESWKVM
Sbjct:   230 LDSYPSFPTLESWKVM 245


>TAIR|locus:2063265 [details] [associations]
            symbol:CAMBP25 "AT2G41010" species:3702 "Arabidopsis
            thaliana" [GO:0005516 "calmodulin binding" evidence=IDA]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0009414 "response to water
            deprivation" evidence=IEP] [GO:0009651 "response to salt stress"
            evidence=IMP] [GO:0010337 "regulation of salicylic acid metabolic
            process" evidence=IMP] GO:GO:0005634 EMBL:CP002685
            GenomeReviews:CT485783_GR GO:GO:0009651 GO:GO:0009414 GO:GO:0005516
            EMBL:AC004261 GO:GO:0010337 InterPro:IPR008889 Pfam:PF05678
            EMBL:AF325087 EMBL:AY531115 EMBL:BT024619 EMBL:AK117111
            IPI:IPI00521074 PIR:T02118 RefSeq:NP_181634.1 UniGene:At.19612
            STRING:O80683 EnsemblPlants:AT2G41010.1 GeneID:818701
            KEGG:ath:AT2G41010 TAIR:At2g41010 eggNOG:NOG251503
            HOGENOM:HOG000090723 InParanoid:O80683 OMA:HQENLAV PhylomeDB:O80683
            ProtClustDB:CLSN2683656 ArrayExpress:O80683 Genevestigator:O80683
            Uniprot:O80683
        Length = 238

 Score = 368 (134.6 bits), Expect = 7.4e-34, P = 7.4e-34
 Identities = 106/256 (41%), Positives = 140/256 (54%)

Query:     1 MTSSENLPSVDAWSFRAAF-ADSWL-SEAYARDTETLTKALQKTFXXXXXXXXXXXDITY 58
             M +SE L SVD+W +R  F  DSWL S+ ++ D + L +AL  T               +
Sbjct:     1 MVTSEGLASVDSWLYRQGFNVDSWLLSDTFSHDNDLLARALHTTVTA-----------PH 49

Query:    59 SVTETLACDFTPPFVAPE-TPTVSN-VSG-SDPETL---PKRQRTAAVGGPNSGKITKRK 112
             ++T + A   +     P  T T+S+ VSG SDPE +    KR+R   +     GK  KR+
Sbjct:    50 TLTPSSAFFDSSAVSHPSSTNTLSSTVSGASDPEIIGGGAKRKRNCLL---TDGKAAKRR 106

Query:   113 ARASKKTQTTFITADPANFRQMVQQVTGVRF---GSAQVAMAPVLKPEPQR---PXXXXX 166
             ARASKK+QTTFITADP+NFRQMVQQVTG ++    S+     P++KPEP R         
Sbjct:   107 ARASKKSQTTFITADPSNFRQMVQQVTGAKYIDDSSSFGIFDPIVKPEPLRFVNKLPCGP 166

Query:   167 XXXXXSLPTLDTSAFLLDHHQQ---LGQAPGAGVGSV-LGSGHFDFQTSLVCDGASTGLE 222
                  ++P LDTSAFL +HHQ+   +G A      SV L SG    + S   D   + +E
Sbjct:   167 SDRSTAVPMLDTSAFLSNHHQENLAVGNAFSGNSSSVGLPSG----KPSATADPGGSAVE 222

Query:   223 FDALSNFPTLESWKVM 238
             FD    FPTLESWKVM
Sbjct:   223 FDNYPTFPTLESWKVM 238


>TAIR|locus:2129700 [details] [associations]
            symbol:AT4G15120 "AT4G15120" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL161540
            EMBL:Z97337 InterPro:IPR008889 Pfam:PF05678 EMBL:BT005406
            EMBL:AK117493 IPI:IPI00518783 PIR:A71415 RefSeq:NP_567458.1
            UniGene:At.33211 EnsemblPlants:AT4G15120.1 GeneID:827178
            KEGG:ath:AT4G15120 TAIR:At4g15120 eggNOG:NOG299380
            HOGENOM:HOG000114092 InParanoid:O23366 OMA:SPWQYAN PhylomeDB:O23366
            ProtClustDB:CLSN2688657 Genevestigator:O23366 Uniprot:O23366
        Length = 193

 Score = 113 (44.8 bits), Expect = 5.8e-05, P = 5.8e-05
 Identities = 30/74 (40%), Positives = 40/74 (54%)

Query:    77 TPTVSNVSGSDPETLPKRQRTAAVGGPNSGKITKRKARASKKTQTTFITADPANFRQMVQ 136
             T T +  + +D    P  +R A        K T+R++RAS++T TT    D ANFR MVQ
Sbjct:    26 TTTTTTATSADSPLSPDNRRVA--------KPTRRRSRASRRTPTTLFNTDTANFRAMVQ 77

Query:   137 QVTG----VRFGSA 146
             Q TG    V FGS+
Sbjct:    78 QFTGGPSAVAFGSS 91


>TAIR|locus:2090389 [details] [associations]
            symbol:AT3G22160 "AT3G22160" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] [GO:0006612 "protein targeting to membrane"
            evidence=RCA] [GO:0009414 "response to water deprivation"
            evidence=RCA] [GO:0009693 "ethylene biosynthetic process"
            evidence=RCA] [GO:0009737 "response to abscisic acid stimulus"
            evidence=RCA] [GO:0009863 "salicylic acid mediated signaling
            pathway" evidence=RCA] [GO:0010363 "regulation of plant-type
            hypersensitive response" evidence=RCA] [GO:0042538 "hyperosmotic
            salinity response" evidence=RCA] [GO:0043069 "negative regulation
            of programmed cell death" evidence=RCA] [GO:0051707 "response to
            other organism" evidence=RCA] EMBL:CP002686
            GenomeReviews:BA000014_GR EMBL:AP001306 InterPro:IPR008889
            Pfam:PF05678 HOGENOM:HOG000114092 ProtClustDB:CLSN2688657
            EMBL:AY088580 IPI:IPI00538920 RefSeq:NP_566699.1 UniGene:At.42989
            STRING:Q9LIE6 PaxDb:Q9LIE6 PRIDE:Q9LIE6 EnsemblPlants:AT3G22160.1
            GeneID:821780 KEGG:ath:AT3G22160 TAIR:At3g22160 eggNOG:NOG277522
            InParanoid:Q9LIE6 OMA:MANPNEW PhylomeDB:Q9LIE6
            Genevestigator:Q9LIE6 Uniprot:Q9LIE6
        Length = 192

 Score = 112 (44.5 bits), Expect = 7.8e-05, P = 7.8e-05
 Identities = 25/56 (44%), Positives = 35/56 (62%)

Query:   103 PNSGKITK---RKARASKKTQTTFITADPANFRQMVQQVTG----VRFGSAQVAMA 151
             P +G++TK   R++RAS++T TT +  D +NFR MVQQ TG    + FGS     A
Sbjct:    45 PETGRVTKPTRRRSRASRRTPTTLLNTDTSNFRAMVQQYTGGPSAMAFGSGNTTSA 100


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.314   0.127   0.375    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      238       217   0.00090  112 3  11 23  0.41    33
                                                     32  0.39    36


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  4
  No. of states in DFA:  598 (64 KB)
  Total size of DFA:  169 KB (2099 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  19.60u 0.11s 19.71t   Elapsed:  00:00:01
  Total cpu time:  19.61u 0.11s 19.72t   Elapsed:  00:00:01
  Start:  Fri May 10 14:27:09 2013   End:  Fri May 10 14:27:10 2013

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