Query 026455
Match_columns 238
No_of_seqs 73 out of 75
Neff 2.6
Searched_HMMs 13730
Date Mon Mar 25 13:58:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026455.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/026455hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1k8ba_ d.241.1.1 (A:) Transla 58.0 3.5 0.00026 26.8 2.8 23 24-46 17-39 (52)
2 d1neea1 d.241.1.1 (A:1-98) Tra 25.2 17 0.0013 25.6 2.2 24 24-47 47-70 (98)
3 d3etja3 d.142.1.2 (A:79-276) N 17.7 21 0.0015 24.9 1.3 33 113-145 163-195 (198)
4 d1ug7a_ a.24.24.1 (A:) Domain 14.4 48 0.0035 25.2 2.6 36 10-46 16-56 (128)
5 d1mc2a_ a.133.1.2 (A:) Snake p 12.9 39 0.0029 24.8 1.7 15 129-143 3-17 (122)
6 d1wxva1 d.15.1.1 (A:7-87) Bag- 12.6 51 0.0037 21.6 2.1 18 128-145 28-45 (81)
7 d1n28a_ a.133.1.2 (A:) Phospho 12.0 44 0.0032 24.5 1.7 15 129-143 3-17 (124)
8 d1jlta_ a.133.1.2 (A:) Snake p 11.4 50 0.0036 24.3 1.9 16 128-143 2-17 (122)
9 d1vipa_ a.133.1.2 (A:) Snake p 11.1 52 0.0038 24.1 1.9 16 128-143 2-17 (121)
10 d1ppaa_ a.133.1.2 (A:) Snake p 10.5 52 0.0038 24.0 1.7 15 129-143 3-17 (121)
No 1
>d1k8ba_ d.241.1.1 (A:) Translation initiation factor 2 beta, aIF2beta, N-terminal domain {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=57.95 E-value=3.5 Score=26.78 Aligned_cols=23 Identities=35% Similarity=0.377 Sum_probs=20.9
Q ss_pred HHHHhhhcHHHHHHHHHhHhhcC
Q 026455 24 LSEAYARDTETLTKALQKTFSNN 46 (238)
Q Consensus 24 lseafarD~e~LtkALqkSlsn~ 46 (238)
|.++..||.++|.|+|.++|...
T Consensus 17 I~~~L~R~p~hv~kfl~~ELgt~ 39 (52)
T d1k8ba_ 17 LAKAVNRDEEFFAKYLLKETGSA 39 (52)
T ss_dssp HHHHHHTCHHHHHHHHHHHHSSE
T ss_pred HHHHhCCCHHHHHHHHHHHhCCc
Confidence 88999999999999999999643
No 2
>d1neea1 d.241.1.1 (A:1-98) Translation initiation factor 2 beta, aIF2beta, N-terminal domain {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=25.16 E-value=17 Score=25.62 Aligned_cols=24 Identities=25% Similarity=0.421 Sum_probs=22.0
Q ss_pred HHHHhhhcHHHHHHHHHhHhhcCC
Q 026455 24 LSEAYARDTETLTKALQKTFSNNN 47 (238)
Q Consensus 24 lseafarD~e~LtkALqkSlsn~~ 47 (238)
|.++..||-++|+|+|.++|....
T Consensus 47 Ia~~L~R~p~hl~kfl~~ELgt~g 70 (98)
T d1neea1 47 VADALNRDPQHLLKFLLRELGTAG 70 (98)
T ss_dssp HHHHHCSSHHHHHHHHHHHCCSCC
T ss_pred HHHHHCCCHHHHHHHHHHHhCCce
Confidence 899999999999999999997654
No 3
>d3etja3 d.142.1.2 (A:79-276) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), domain 2 {Escherichia coli [TaxId: 562]}
Probab=17.67 E-value=21 Score=24.89 Aligned_cols=33 Identities=15% Similarity=0.157 Sum_probs=26.5
Q ss_pred ccccCCCCceEeecCchHHHHHHHHHhcCCCCC
Q 026455 113 ARASKKTQTTFITADPANFRQMVQQVTGVRFGS 145 (238)
Q Consensus 113 ~RaSrR~ptT~i~ad~anFRaMVQq~TG~p~~~ 145 (238)
+|+++-...|...++.+.|..+++-++|.|.+.
T Consensus 163 ~Rp~~~g~~~~~~~~~s~~e~~~ra~lglpl~~ 195 (198)
T d3etja3 163 PRVHNSGHWTQNGASISQFELHLRAITDLPLPQ 195 (198)
T ss_dssp SSCCGGGTTHHHHSSSCHHHHHHHHHTTCCCCC
T ss_pred CCcccccceEeecccCCHHHHHHHHHcCCCCCC
Confidence 455554567777889999999999999999753
No 4
>d1ug7a_ a.24.24.1 (A:) Domain from hypothetical 2610208m17rik protein {Mouse (Mus musculus) [TaxId: 10090]}
Probab=14.41 E-value=48 Score=25.17 Aligned_cols=36 Identities=36% Similarity=0.631 Sum_probs=29.4
Q ss_pred cccc--cccccch-hHH--HHHHhhhcHHHHHHHHHhHhhcC
Q 026455 10 VDAW--SFRAAFA-DSW--LSEAYARDTETLTKALQKTFSNN 46 (238)
Q Consensus 10 ~~~w--~~r~~~~-dsw--lseafarD~e~LtkALqkSlsn~ 46 (238)
|.-| .||.+-. ||| |-||.. .-..|+|-|||+....
T Consensus 16 v~kW~a~~~kgtdFDSWGQLVEA~d-EYq~lar~L~k~~~~q 56 (128)
T d1ug7a_ 16 LQRWGASLRRGADFDSWGQLVEAID-EYQILARHLQKEAQAQ 56 (128)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHH-HHHHHHHHHHHHHTCS
T ss_pred HHHHHHHHhccCCcchHHHHHHHHH-HHHHHHHHHHHHHhcc
Confidence 5567 6777777 999 999988 4589999999999664
No 5
>d1mc2a_ a.133.1.2 (A:) Snake phospholipase A2 {Hundred-pace snake (Agkistrodon acutus) [TaxId: 36307]}
Probab=12.89 E-value=39 Score=24.78 Aligned_cols=15 Identities=27% Similarity=0.235 Sum_probs=13.0
Q ss_pred hHHHHHHHHHhcCCC
Q 026455 129 ANFRQMVQQVTGVRF 143 (238)
Q Consensus 129 anFRaMVQq~TG~p~ 143 (238)
-+|+.||+.+||..+
T Consensus 3 ~qf~~MI~c~tg~~p 17 (122)
T d1mc2a_ 3 FELGKMIWQETGKNP 17 (122)
T ss_dssp HHHHHHHHHHHCSCH
T ss_pred HHHHHHHHhccCCCH
Confidence 489999999999864
No 6
>d1wxva1 d.15.1.1 (A:7-87) Bag-family molecular chaperone regulator-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=12.55 E-value=51 Score=21.57 Aligned_cols=18 Identities=28% Similarity=0.364 Sum_probs=15.8
Q ss_pred chHHHHHHHHHhcCCCCC
Q 026455 128 PANFRQMVQQVTGVRFGS 145 (238)
Q Consensus 128 ~anFRaMVQq~TG~p~~~ 145 (238)
.++|++++++.||+|...
T Consensus 28 v~~LK~~I~~~tgvp~~~ 45 (81)
T d1wxva1 28 VQDLAQVVEEVIGVPQSF 45 (81)
T ss_dssp HHHHHHHHHHHTCCCTTT
T ss_pred HHHHHHHHHHHHCcCHHH
Confidence 579999999999999753
No 7
>d1n28a_ a.133.1.2 (A:) Phospholipase A2 {Human (Homo sapiens), synovial fluid [TaxId: 9606]}
Probab=11.95 E-value=44 Score=24.48 Aligned_cols=15 Identities=33% Similarity=0.574 Sum_probs=12.6
Q ss_pred hHHHHHHHHHhcCCC
Q 026455 129 ANFRQMVQQVTGVRF 143 (238)
Q Consensus 129 anFRaMVQq~TG~p~ 143 (238)
-+|..|||.+||...
T Consensus 3 ~qf~~MI~c~tg~~~ 17 (124)
T d1n28a_ 3 VNFHRMIKLTTGKEA 17 (124)
T ss_dssp HHHHHHHHHHHCSCH
T ss_pred HHHHHHHHHHhCCCc
Confidence 489999999999653
No 8
>d1jlta_ a.133.1.2 (A:) Snake phospholipase A2 {Sand viper (Vipera ammodytes meridionalis), vipoxin inhibitor [TaxId: 8704]}
Probab=11.43 E-value=50 Score=24.29 Aligned_cols=16 Identities=31% Similarity=0.320 Sum_probs=13.2
Q ss_pred chHHHHHHHHHhcCCC
Q 026455 128 PANFRQMVQQVTGVRF 143 (238)
Q Consensus 128 ~anFRaMVQq~TG~p~ 143 (238)
--+|+.||+.+||...
T Consensus 2 l~qf~~MI~c~tg~~~ 17 (122)
T d1jlta_ 2 LFQFGDMILQKTGKEA 17 (122)
T ss_dssp HHHHHHHHHHHHSSCG
T ss_pred HHHHHHHHHHhhCCCc
Confidence 3589999999999653
No 9
>d1vipa_ a.133.1.2 (A:) Snake phospholipase A2 {Russell's viper (Vipera russelli) [TaxId: 8707]}
Probab=11.08 E-value=52 Score=24.10 Aligned_cols=16 Identities=25% Similarity=0.358 Sum_probs=13.4
Q ss_pred chHHHHHHHHHhcCCC
Q 026455 128 PANFRQMVQQVTGVRF 143 (238)
Q Consensus 128 ~anFRaMVQq~TG~p~ 143 (238)
--+|+.||+.+||..+
T Consensus 2 l~qf~~MI~c~tg~~~ 17 (121)
T d1vipa_ 2 LFQFAEMIVKMTGKNP 17 (121)
T ss_dssp HHHHHHHHHHHHSSCH
T ss_pred HHHHHHHHHHccCCCH
Confidence 3589999999999754
No 10
>d1ppaa_ a.133.1.2 (A:) Snake phospholipase A2 {Eastern cottonmouth snake (Agkistrodon piscivorus piscivorus) [TaxId: 8716]}
Probab=10.51 E-value=52 Score=24.03 Aligned_cols=15 Identities=27% Similarity=0.317 Sum_probs=12.7
Q ss_pred hHHHHHHHHHhcCCC
Q 026455 129 ANFRQMVQQVTGVRF 143 (238)
Q Consensus 129 anFRaMVQq~TG~p~ 143 (238)
-+|..||+.+||..+
T Consensus 3 ~qf~~MI~~~Tg~~~ 17 (121)
T d1ppaa_ 3 LELGKMILQETGKNA 17 (121)
T ss_dssp HHHHHHHHHHHCSCH
T ss_pred HHHHHHHHHhhCCCH
Confidence 479999999999654
Done!