Query 026466
Match_columns 238
No_of_seqs 52 out of 54
Neff 2.9
Searched_HMMs 13730
Date Mon Mar 25 14:13:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026466.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/026466hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1bhga3 c.1.8.3 (A:329-632) be 55.1 1.5 0.00011 33.5 0.6 40 118-157 36-75 (304)
2 d1jz8a5 c.1.8.3 (A:334-625) be 51.8 3.2 0.00024 32.0 2.1 39 118-156 37-75 (292)
3 d1o9ra_ a.25.1.1 (A:) Dodecame 44.1 23 0.0017 25.7 5.9 30 103-132 52-81 (162)
4 d2je8a5 c.1.8.3 (A:331-678) Fi 43.7 6 0.00043 30.1 2.5 35 120-155 47-84 (348)
5 d2fjca1 a.25.1.1 (A:27-177) Do 38.5 29 0.0021 24.6 5.5 32 103-134 43-74 (151)
6 d1umna_ a.25.1.1 (A:) Dodecame 37.0 34 0.0025 24.3 5.7 31 103-133 38-68 (151)
7 d1yq2a5 c.1.8.3 (A:313-609) be 36.5 6.9 0.0005 30.5 1.8 39 118-156 36-74 (297)
8 d2vzsa5 c.1.8.3 (A:336-674) Ex 35.5 22 0.0016 27.1 4.6 65 119-183 40-125 (339)
9 d2f96a1 c.55.3.5 (A:19-220) Ri 28.3 21 0.0015 24.8 3.2 36 146-181 158-198 (202)
10 d1jiga_ a.25.1.1 (A:) Dodecame 28.2 49 0.0036 23.2 5.3 30 103-132 40-69 (146)
11 d1ji5a_ a.25.1.1 (A:) Dodecame 27.2 66 0.0048 22.4 5.8 33 102-134 35-67 (142)
12 d1n1qa_ a.25.1.1 (A:) Dodecame 26.8 53 0.0039 23.1 5.3 32 102-133 42-73 (149)
13 d1zavu1 a.108.1.1 (U:1-30) Rib 26.4 33 0.0024 20.3 3.2 25 59-83 2-26 (30)
14 d1d0qa_ g.41.3.2 (A:) Zinc-bin 25.8 8.1 0.00059 27.1 0.4 38 122-159 56-98 (102)
15 d2bk6a1 a.25.1.1 (A:7-156) Dod 25.8 63 0.0046 22.7 5.5 33 102-134 36-68 (150)
16 d2al3a1 d.15.1.2 (A:10-85) Tet 25.4 19 0.0014 25.0 2.4 29 128-156 7-37 (76)
17 d1f2ea1 a.45.1.1 (A:81-201) Cl 24.8 44 0.0032 22.3 4.3 37 106-147 42-78 (121)
18 d1or7a2 a.177.1.1 (A:-1-111) S 24.6 26 0.0019 23.5 3.0 34 142-179 31-64 (113)
19 d1ji4a_ a.25.1.1 (A:) Dodecame 24.0 30 0.0022 24.5 3.4 32 103-134 37-68 (144)
20 d2b3ta1 c.66.1.30 (A:2-275) N5 22.5 36 0.0027 27.4 4.0 31 142-177 2-33 (274)
21 d1dpsa_ a.25.1.1 (A:) Dodecame 22.3 41 0.003 24.4 3.9 28 104-131 56-83 (159)
22 d1oeya_ d.15.2.2 (A:) Neutroph 21.1 27 0.002 24.7 2.5 22 137-158 21-42 (82)
23 d1nhya1 a.45.1.1 (A:76-219) GS 20.5 82 0.006 21.5 5.1 44 100-148 48-91 (144)
24 d1lvfa_ a.47.2.1 (A:) Syntaxin 20.2 99 0.0072 21.4 5.5 54 60-125 44-97 (106)
No 1
>d1bhga3 c.1.8.3 (A:329-632) beta-Glucuronidase, domain 3 {Human (Homo sapiens) [TaxId: 9606]}
Probab=55.09 E-value=1.5 Score=33.51 Aligned_cols=40 Identities=15% Similarity=0.143 Sum_probs=30.3
Q ss_pred HHHHHHHhhhcccccchhcCCCchHHHHHHHHHhhcCCCC
Q 026466 118 ASLESRFLFLAADARSTLRGWRPSYRNVLLAVRKNLNIPC 157 (238)
Q Consensus 118 ~~IE~RFrfLAAD~~TvLRG~~vsYReVLl~VC~kLKV~y 157 (238)
+.++..|+.+.+=++|++|-++..+-+.+++.||++||-.
T Consensus 36 ~~~~~d~~~~k~~G~N~iR~~~~~~~~~~~~~cD~~Gilv 75 (304)
T d1bhga3 36 PLLVKDFNLLRWLGANAFRTSHYPYAEEVMQMCDRYGIVV 75 (304)
T ss_dssp HHHHHHHHHHHHHTCCEEECTTSCCSSTHHHHHSTTCCEE
T ss_pred HHHHHHHHHHHHcCCCEEEecCCCChHHHHHHHHhcCCee
Confidence 3456666666655599999886667788999999998754
No 2
>d1jz8a5 c.1.8.3 (A:334-625) beta-Galactosidase, domain 3 {Escherichia coli [TaxId: 562]}
Probab=51.76 E-value=3.2 Score=31.99 Aligned_cols=39 Identities=5% Similarity=0.097 Sum_probs=32.0
Q ss_pred HHHHHHHhhhcccccchhcCCCchHHHHHHHHHhhcCCC
Q 026466 118 ASLESRFLFLAADARSTLRGWRPSYRNVLLAVRKNLNIP 156 (238)
Q Consensus 118 ~~IE~RFrfLAAD~~TvLRG~~vsYReVLl~VC~kLKV~ 156 (238)
+.++..|+.+-.=|+|++|-+.....+-.++.||++||-
T Consensus 37 ~~~~~di~l~k~~G~N~iR~~~~p~~~~~~~~~D~~Gil 75 (292)
T d1jz8a5 37 QTMVQDILLMKQNNFNAVRCSHYPNHPLWYTLCDRYGLY 75 (292)
T ss_dssp HHHHHHHHHHHHTTCCEEECTTSCCCHHHHHHHHHHTCE
T ss_pred HHHHHHHHHHHhcCCCEEEecCCCChHHHHHHHhhcCCe
Confidence 456677888887889999998667778899999999874
No 3
>d1o9ra_ a.25.1.1 (A:) Dodecameric ferritin homolog {Agrobacterium tumefaciens, Dps [TaxId: 358]}
Probab=44.14 E-value=23 Score=25.66 Aligned_cols=30 Identities=10% Similarity=0.120 Sum_probs=25.3
Q ss_pred hHHHHhhhHHHHHHHHHHHHHHhhhccccc
Q 026466 103 YVMIEQDLEEREDFIASLESRFLFLAADAR 132 (238)
Q Consensus 103 y~~i~~~~~~R~~~~~~IE~RFrfLAAD~~ 132 (238)
|...+...++=..+.+.|++|++.+|+...
T Consensus 52 H~~~~~~~~~~~~~~D~iAERi~~LG~~p~ 81 (162)
T d1o9ra_ 52 HELLDTFRTQLDNHGDTIAERVVQLGGTAL 81 (162)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCCCC
T ss_pred HHhHHHHHHHHHHHHHHHHHHHHHcCCCCC
Confidence 333777778888999999999999999983
No 4
>d2je8a5 c.1.8.3 (A:331-678) Five-domain beta-mannosidase, domain 3 {Bacteroides thetaiotaomicron [TaxId: 818]}
Probab=43.71 E-value=6 Score=30.13 Aligned_cols=35 Identities=11% Similarity=0.080 Sum_probs=24.0
Q ss_pred HHHHHhhhcccccchhcC---CCchHHHHHHHHHhhcCC
Q 026466 120 LESRFLFLAADARSTLRG---WRPSYRNVLLAVRKNLNI 155 (238)
Q Consensus 120 IE~RFrfLAAD~~TvLRG---~~vsYReVLl~VC~kLKV 155 (238)
++..|+.+-.=|+|++|- .-+. -+.+++.||++||
T Consensus 47 ~~~di~l~ke~G~N~IR~~~~~~~p-~~~f~d~cD~~Gi 84 (348)
T d2je8a5 47 YQTLFRDMKEANMNMVRIWGGGTYE-NNLFYDLADENGI 84 (348)
T ss_dssp HHHHHHHHHHTTCCEEEECTTSCCC-CHHHHHHHHHHTC
T ss_pred HHHHHHHHHHcCCCEEecCCCCCCC-CHHHHHHHHHCCC
Confidence 445555555555888883 2222 6888999999997
No 5
>d2fjca1 a.25.1.1 (A:27-177) Dodecameric ferritin homolog {Treponema pallidum, TpF1 [TaxId: 160]}
Probab=38.45 E-value=29 Score=24.61 Aligned_cols=32 Identities=19% Similarity=0.270 Sum_probs=26.5
Q ss_pred hHHHHhhhHHHHHHHHHHHHHHhhhcccccch
Q 026466 103 YVMIEQDLEEREDFIASLESRFLFLAADARST 134 (238)
Q Consensus 103 y~~i~~~~~~R~~~~~~IE~RFrfLAAD~~Tv 134 (238)
|...+...++=...++.|++|++.||+.....
T Consensus 43 H~~f~~~y~~~~~~~D~iAERi~~Lgg~p~~t 74 (151)
T d2fjca1 43 HELLEEYYVSVTEAFDTIAERLLQLGAQAPAS 74 (151)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCCccC
Confidence 44477778888899999999999999998443
No 6
>d1umna_ a.25.1.1 (A:) Dodecameric ferritin homolog {Streptococcus suis [TaxId: 1307]}
Probab=37.02 E-value=34 Score=24.32 Aligned_cols=31 Identities=16% Similarity=0.339 Sum_probs=26.0
Q ss_pred hHHHHhhhHHHHHHHHHHHHHHhhhcccccc
Q 026466 103 YVMIEQDLEEREDFIASLESRFLFLAADARS 133 (238)
Q Consensus 103 y~~i~~~~~~R~~~~~~IE~RFrfLAAD~~T 133 (238)
|...+...++-..+++.|++|++.+|+....
T Consensus 38 H~~f~~~~~e~~~~~D~lAERi~~lGg~p~~ 68 (151)
T d1umna_ 38 HPKMDEYMEEIDGYLDEMSERLITLGGAPFS 68 (151)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCCCc
Confidence 3447888888899999999999999997733
No 7
>d1yq2a5 c.1.8.3 (A:313-609) beta-Galactosidase, domain 3 {Arthrobacter sp. c2-2 [TaxId: 192168]}
Probab=36.54 E-value=6.9 Score=30.45 Aligned_cols=39 Identities=10% Similarity=0.056 Sum_probs=31.3
Q ss_pred HHHHHHHhhhcccccchhcCCCchHHHHHHHHHhhcCCC
Q 026466 118 ASLESRFLFLAADARSTLRGWRPSYRNVLLAVRKNLNIP 156 (238)
Q Consensus 118 ~~IE~RFrfLAAD~~TvLRG~~vsYReVLl~VC~kLKV~ 156 (238)
+.++..|+.+-.=|+|++|-+....-+-+++.||++||-
T Consensus 36 ~~~~~di~l~k~~G~N~iR~~h~p~~~~~~d~cD~~Gil 74 (297)
T d1yq2a5 36 AGAREDLALMKRFNVNAIRTSHYPPHPRLLDLADEMGFW 74 (297)
T ss_dssp HHHHHHHHHHHHTTCCEEEETTSCCCHHHHHHHHHHTCE
T ss_pred HHHHHHHHHHHHCCCCEEEccCCCChHHHHHHHHhcCCE
Confidence 356677888887789999986555667799999999985
No 8
>d2vzsa5 c.1.8.3 (A:336-674) Exochitosanase CsxA {Amycolatopsis orientalis [TaxId: 31958]}
Probab=35.54 E-value=22 Score=27.15 Aligned_cols=65 Identities=6% Similarity=0.046 Sum_probs=42.4
Q ss_pred HHHHHHhhhcccccchhcCCCchHHHHHHHHHhhcCCCCC--------------------CCCC-hHHHHHHHHHHHHhh
Q 026466 119 SLESRFLFLAADARSTLRGWRPSYRNVLLAVRKNLNIPCS--------------------SKLS-TEDLEAEIFLHLLQE 177 (238)
Q Consensus 119 ~IE~RFrfLAAD~~TvLRG~~vsYReVLl~VC~kLKV~ys--------------------~kls-T~dLEaEIFLhLL~~ 177 (238)
.++.+|+.+.+=++|++|=++..--+..++.||++||-.- ...+ -.+.-.+.+..++.+
T Consensus 40 ~~~~~l~~~k~~G~N~iR~~~~~~~~~f~d~~D~~Gi~V~~e~~~~~~w~~~~~~~~~~~~~~p~~~~~~~~~~~~~v~r 119 (339)
T d2vzsa5 40 AAADKLKYVLNLGLNTVRLEGHIEPDEFFDIADDLGVLTMPGWECCDKWEGQVNGEEKGEPWVESDYPIAKASMFSEAER 119 (339)
T ss_dssp HHHHHHHHHHHTTCCEEEEESCCCCHHHHHHHHHHTCEEEEECCSSSGGGTTTSTTSSSCCCCTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEecCCCCCHHHHHHHHHCCCeEecccccCccccccCCcccccCCCCHHHHHHHHHHHHHHHHH
Confidence 3556666666666999997655556789999999999741 1111 123344566677888
Q ss_pred hccccc
Q 026466 178 YASEES 183 (238)
Q Consensus 178 ~ss~~~ 183 (238)
+..++|
T Consensus 120 ~rnHPs 125 (339)
T d2vzsa5 120 LRDHPS 125 (339)
T ss_dssp HTTCTT
T ss_pred hcCCCc
Confidence 777755
No 9
>d2f96a1 c.55.3.5 (A:19-220) Ribonuclease T {Pseudomonas aeruginosa [TaxId: 287]}
Probab=28.27 E-value=21 Score=24.81 Aligned_cols=36 Identities=11% Similarity=0.213 Sum_probs=27.5
Q ss_pred HHHHHhhcCCCCCCC-----CChHHHHHHHHHHHHhhhccc
Q 026466 146 LLAVRKNLNIPCSSK-----LSTEDLEAEIFLHLLQEYASE 181 (238)
Q Consensus 146 Ll~VC~kLKV~ys~k-----lsT~dLEaEIFLhLL~~~ss~ 181 (238)
|-.+|++++|.++.. +.-...-++||.++++++...
T Consensus 158 L~~~~~~~gi~~~~~~aH~Al~Da~~ta~i~~~l~~~~~~~ 198 (202)
T d2f96a1 158 LAKACQAAGMEFDNREAHSARYDTEKTAELFCGIVNRWKEM 198 (202)
T ss_dssp HHHHHHHTTCCCCTTSCCCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHcCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHc
Confidence 566899999987553 355566689999999998743
No 10
>d1jiga_ a.25.1.1 (A:) Dodecameric ferritin homolog {Bacillus anthracis, Dlp-2 [TaxId: 1392]}
Probab=28.16 E-value=49 Score=23.17 Aligned_cols=30 Identities=23% Similarity=0.258 Sum_probs=25.0
Q ss_pred hHHHHhhhHHHHHHHHHHHHHHhhhccccc
Q 026466 103 YVMIEQDLEEREDFIASLESRFLFLAADAR 132 (238)
Q Consensus 103 y~~i~~~~~~R~~~~~~IE~RFrfLAAD~~ 132 (238)
|...+...++=...++.|++|++.+|+...
T Consensus 40 H~~~~e~~~~~~~~~D~iAERi~~lgg~p~ 69 (146)
T d1jiga_ 40 HEKFEEFYNEAGTYIDELAERILALEGKPL 69 (146)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHccCCCc
Confidence 344777778888999999999999998873
No 11
>d1ji5a_ a.25.1.1 (A:) Dodecameric ferritin homolog {Bacillus anthracis, Dlp-1 [TaxId: 1392]}
Probab=27.16 E-value=66 Score=22.40 Aligned_cols=33 Identities=18% Similarity=0.169 Sum_probs=27.0
Q ss_pred chHHHHhhhHHHHHHHHHHHHHHhhhcccccch
Q 026466 102 DYVMIEQDLEEREDFIASLESRFLFLAADARST 134 (238)
Q Consensus 102 Dy~~i~~~~~~R~~~~~~IE~RFrfLAAD~~Tv 134 (238)
.|...+...++=...++.|++|++.||+.....
T Consensus 35 ~H~~~~e~y~~~~~~~D~lAERi~~Lgg~p~~~ 67 (142)
T d1ji5a_ 35 LHEKFEELYTESATHIDEIAERILAIGGKPVAT 67 (142)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHccCCCCcC
Confidence 444477788888899999999999999998443
No 12
>d1n1qa_ a.25.1.1 (A:) Dodecameric ferritin homolog {Bacillus brevis, Dps [TaxId: 1393]}
Probab=26.79 E-value=53 Score=23.11 Aligned_cols=32 Identities=19% Similarity=0.154 Sum_probs=25.9
Q ss_pred chHHHHhhhHHHHHHHHHHHHHHhhhcccccc
Q 026466 102 DYVMIEQDLEEREDFIASLESRFLFLAADARS 133 (238)
Q Consensus 102 Dy~~i~~~~~~R~~~~~~IE~RFrfLAAD~~T 133 (238)
.|...+..-++=...++.|++|++.+|+....
T Consensus 42 lH~~~ee~y~e~~~~~D~iAERi~~Lgg~p~~ 73 (149)
T d1n1qa_ 42 LHEKFEELYTEASGHIDTLAERVLSIGGSPIA 73 (149)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHccCCCCc
Confidence 34447777777788999999999999999843
No 13
>d1zavu1 a.108.1.1 (U:1-30) Ribosomal protein L7/12, oligomerisation (N-terminal) domain {Thermotoga maritima [TaxId: 2336]}
Probab=26.36 E-value=33 Score=20.27 Aligned_cols=25 Identities=36% Similarity=0.193 Sum_probs=21.6
Q ss_pred CcHHHHHHHHhhChHHHHHHHHHhc
Q 026466 59 FDPELRSVLELATDSELYELERILF 83 (238)
Q Consensus 59 ~~~ELr~~LeLATdEEL~~Lt~ILf 83 (238)
..+|+-++.|..|-.||-+|+.-|-
T Consensus 2 ~~eeiv~aiekltvaelaelvk~le 26 (30)
T d1zavu1 2 TIDEIIEAIEKLTVSELAELVKKLE 26 (30)
T ss_dssp CHHHHHHHHHHSBHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 4578999999999999999998763
No 14
>d1d0qa_ g.41.3.2 (A:) Zinc-binding domain of DNA primase {Bacillus stearothermophilus [TaxId: 1422]}
Probab=25.82 E-value=8.1 Score=27.12 Aligned_cols=38 Identities=11% Similarity=0.036 Sum_probs=30.0
Q ss_pred HHHhhh----cccccchhcC-CCchHHHHHHHHHhhcCCCCCC
Q 026466 122 SRFLFL----AADARSTLRG-WRPSYRNVLLAVRKNLNIPCSS 159 (238)
Q Consensus 122 ~RFrfL----AAD~~TvLRG-~~vsYReVLl~VC~kLKV~ys~ 159 (238)
..+.|| ++|..++++- .+++|.|++..++++.+|+...
T Consensus 56 ~~~~Cf~Cg~~Gd~i~fv~~~~~~sf~eAv~~La~~~gi~l~~ 98 (102)
T d1d0qa_ 56 QIFHCFGCGAGGNAFTFLMDIEGIPFVEAAKRLAAKAGVDLSV 98 (102)
T ss_dssp TEEEETTTCCEECHHHHHHHHHTCCHHHHHHHHHHHHTCCCGG
T ss_pred hheeeehhcccccHHHHHHHHHCcCHHHHHHHHHHHhCCCCCC
Confidence 346777 4566777775 5999999999999999998653
No 15
>d2bk6a1 a.25.1.1 (A:7-156) Dodecameric ferritin homolog {Listeria innocua [TaxId: 1642]}
Probab=25.75 E-value=63 Score=22.66 Aligned_cols=33 Identities=15% Similarity=0.117 Sum_probs=26.8
Q ss_pred chHHHHhhhHHHHHHHHHHHHHHhhhcccccch
Q 026466 102 DYVMIEQDLEEREDFIASLESRFLFLAADARST 134 (238)
Q Consensus 102 Dy~~i~~~~~~R~~~~~~IE~RFrfLAAD~~Tv 134 (238)
.|...+...++=..+++.|++|++.||+.....
T Consensus 36 lH~~~e~~y~~~~~~~D~iAERi~~Lg~~p~~~ 68 (150)
T d2bk6a1 36 LHEKMDDLYSEFGEQMDEVAERLLAIGGSPFST 68 (150)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCC
Confidence 344477778888899999999999999998444
No 16
>d2al3a1 d.15.1.2 (A:10-85) Tether containing UBX domain for GLUT4 (Tug) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=25.40 E-value=19 Score=25.05 Aligned_cols=29 Identities=17% Similarity=0.138 Sum_probs=20.2
Q ss_pred cccc-cchhcC-CCchHHHHHHHHHhhcCCC
Q 026466 128 AADA-RSTLRG-WRPSYRNVLLAVRKNLNIP 156 (238)
Q Consensus 128 AAD~-~TvLRG-~~vsYReVLl~VC~kLKV~ 156 (238)
..|| +.+++= -+-.-.|||-++|+|+|++
T Consensus 7 ~~~~rR~~VKvtP~t~l~~VL~eaC~k~~~~ 37 (76)
T d2al3a1 7 APNGRRHTVKVTPSTVLLQVLEDTCRRQDFN 37 (76)
T ss_dssp CTTSCEEEECCCTTSBHHHHHHHHHHHTTCC
T ss_pred CCCCcEEEEEeCCCcCHHHHHHHHHHHhCCC
Confidence 3444 344443 2567789999999999985
No 17
>d1f2ea1 a.45.1.1 (A:81-201) Class beta GST {Sphingomonas paucimobilis [TaxId: 13689]}
Probab=24.84 E-value=44 Score=22.33 Aligned_cols=37 Identities=19% Similarity=0.261 Sum_probs=21.5
Q ss_pred HHhhhHHHHHHHHHHHHHHhhhcccccchhcCCCchHHHHHH
Q 026466 106 IEQDLEEREDFIASLESRFLFLAADARSTLRGWRPSYRNVLL 147 (238)
Q Consensus 106 i~~~~~~R~~~~~~IE~RFrfLAAD~~TvLRG~~vsYReVLl 147 (238)
++...++-++.++.||++|. ....|=|.++|+=+|.+
T Consensus 42 ~~~~~~~~~~~l~~le~~L~-----~~~yl~Gd~~TiaDi~~ 78 (121)
T d1f2ea1 42 KAAAAESVKNHLAALDKELA-----GRDHYAGNAFSVADIYL 78 (121)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-----SCSSSSSSSCCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHc-----cCCCchhcCCCHHHHHH
Confidence 34445666788889999982 11234444555555544
No 18
>d1or7a2 a.177.1.1 (A:-1-111) SigmaE factor (RpoE) {Escherichia coli [TaxId: 562]}
Probab=24.65 E-value=26 Score=23.48 Aligned_cols=34 Identities=15% Similarity=0.324 Sum_probs=26.6
Q ss_pred HHHHHHHHHhhcCCCCCCCCChHHHHHHHHHHHHhhhc
Q 026466 142 YRNVLLAVRKNLNIPCSSKLSTEDLEAEIFLHLLQEYA 179 (238)
Q Consensus 142 YReVLl~VC~kLKV~ys~klsT~dLEaEIFLhLL~~~s 179 (238)
|...|..+|.++ + ... ..+||=+|+|+++..+..
T Consensus 31 y~~~l~~~~~~~-~--~~~-daeDl~Qe~~l~~~~~~~ 64 (113)
T d1or7a2 31 YQHKVASLVSRY-V--PSG-DVPDVVQEAFIKAYRALD 64 (113)
T ss_dssp HHHHHHHHHTTT-S--CGG-GHHHHHHHHHHHHHHHGG
T ss_pred HHHHHHHHHHHh-c--CCc-hHHHHHHHHHHHHHHhcc
Confidence 778888888766 3 233 589999999999997654
No 19
>d1ji4a_ a.25.1.1 (A:) Dodecameric ferritin homolog {Helicobacter pylori, Nap [TaxId: 210]}
Probab=24.01 E-value=30 Score=24.49 Aligned_cols=32 Identities=25% Similarity=0.216 Sum_probs=26.4
Q ss_pred hHHHHhhhHHHHHHHHHHHHHHhhhcccccch
Q 026466 103 YVMIEQDLEEREDFIASLESRFLFLAADARST 134 (238)
Q Consensus 103 y~~i~~~~~~R~~~~~~IE~RFrfLAAD~~Tv 134 (238)
|...+...++=...++.|++|++.+|+.....
T Consensus 37 H~~f~e~y~~~~~~~D~iAERi~~LG~~p~~~ 68 (144)
T d1ji4a_ 37 HKATEEIYEEFADMFDDLAERIVQLGHHPLVT 68 (144)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTSCCCCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCCCcC
Confidence 44477788888899999999999999988443
No 20
>d2b3ta1 c.66.1.30 (A:2-275) N5-glutamine methyltransferase, HemK {Escherichia coli [TaxId: 562]}
Probab=22.47 E-value=36 Score=27.44 Aligned_cols=31 Identities=26% Similarity=0.364 Sum_probs=21.9
Q ss_pred HHHHHHHHHhhcCCCCCCCCChHHHHHHHHH-HHHhh
Q 026466 142 YRNVLLAVRKNLNIPCSSKLSTEDLEAEIFL-HLLQE 177 (238)
Q Consensus 142 YReVLl~VC~kLKV~ys~klsT~dLEaEIFL-hLL~~ 177 (238)
|+|.|.+..++|+ +..+..+|++++| |+|+.
T Consensus 2 ~~~~l~~~~~~l~-----~~~~p~~da~~ll~~~l~~ 33 (274)
T d2b3ta1 2 YQHWLREAISQLQ-----ASESPRRDAEILLEHVTGR 33 (274)
T ss_dssp HHHHHHHHHHTTT-----TSSCHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHh-----cCCCHHHHHHHHHHHHhCc
Confidence 7888888888886 2356678888776 55544
No 21
>d1dpsa_ a.25.1.1 (A:) Dodecameric ferritin homolog {Escherichia coli, Dps [TaxId: 562]}
Probab=22.28 E-value=41 Score=24.39 Aligned_cols=28 Identities=18% Similarity=0.156 Sum_probs=24.2
Q ss_pred HHHHhhhHHHHHHHHHHHHHHhhhcccc
Q 026466 104 VMIEQDLEEREDFIASLESRFLFLAADA 131 (238)
Q Consensus 104 ~~i~~~~~~R~~~~~~IE~RFrfLAAD~ 131 (238)
...+...++=...++.|++|++.||+..
T Consensus 56 ~~fee~y~e~~~~~D~iAERI~~Lgg~p 83 (159)
T d1dpsa_ 56 EMLDGFRTALIDHLDTMAERAVQLGGVA 83 (159)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred HhHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 3377777888899999999999999987
No 22
>d1oeya_ d.15.2.2 (A:) Neutrophil cytosol factor 2 (p67phox component of NADPH oxidase) {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.10 E-value=27 Score=24.68 Aligned_cols=22 Identities=23% Similarity=0.132 Sum_probs=19.4
Q ss_pred CCCchHHHHHHHHHhhcCCCCC
Q 026466 137 GWRPSYRNVLLAVRKNLNIPCS 158 (238)
Q Consensus 137 G~~vsYReVLl~VC~kLKV~ys 158 (238)
++|.+|.+++--|++||+.+-.
T Consensus 21 ~~G~~y~~L~~lvs~KL~l~~~ 42 (82)
T d1oeya_ 21 QPGLPYSQVRDMVSKKLELRLE 42 (82)
T ss_dssp CTTCCHHHHHHHHHHHTTCCGG
T ss_pred cCCCCHHHHHHHHHHHhCCChh
Confidence 5799999999999999998743
No 23
>d1nhya1 a.45.1.1 (A:76-219) GST-like domain of elongation factor 1-gamma {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=20.50 E-value=82 Score=21.50 Aligned_cols=44 Identities=11% Similarity=0.172 Sum_probs=27.3
Q ss_pred CcchHHHHhhhHHHHHHHHHHHHHHhhhcccccchhcCCCchHHHHHHH
Q 026466 100 DVDYVMIEQDLEEREDFIASLESRFLFLAADARSTLRGWRPSYRNVLLA 148 (238)
Q Consensus 100 ~~Dy~~i~~~~~~R~~~~~~IE~RFrfLAAD~~TvLRG~~vsYReVLl~ 148 (238)
..|-..++...+.-.+.++.||+++. +...|=|.++|+=+|.+-
T Consensus 48 ~~~~~~~e~~~~~~~~~l~~le~~L~-----~~~~l~Gd~~T~ADi~l~ 91 (144)
T d1nhya1 48 PYNKKSVDSAMDAVDKIVDIFENRLK-----NYTYLATENISLADLVAA 91 (144)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHT-----TCSSSSSSSCCHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHc-----CCCcccccccccchHHHH
Confidence 34444566667777888999998882 123444556666665543
No 24
>d1lvfa_ a.47.2.1 (A:) Syntaxin 6, SNAP-25 homolog {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=20.19 E-value=99 Score=21.39 Aligned_cols=54 Identities=24% Similarity=0.321 Sum_probs=31.7
Q ss_pred cHHHHHHHHhhChHHHHHHHHHhcccCCCCccchhccccCCcchHHHHhhhHHHHHHHHHHHHHHh
Q 026466 60 DPELRSVLELATDSELYELERILFGPSYFSPLLKSFTKRADVDYVMIEQDLEEREDFIASLESRFL 125 (238)
Q Consensus 60 ~~ELr~~LeLATdEEL~~Lt~ILf~~r~fsPLlkS~~k~~~~Dy~~i~~~~~~R~~~~~~IE~RFr 125 (238)
-.||+..|+-+. .+|.+|.+-.---. -+| .++++| ......|.+|+..+..++.
T Consensus 44 ~~eL~~~l~sie-wdL~dLe~av~~ve-~np------~kf~l~----~~ei~~Rr~fi~~~~~~I~ 97 (106)
T d1lvfa_ 44 TNELRNNLRSIE-WDLEDLDETISIVE-ANP------RKFNLD----ATELSIRKAFITSTRQIVR 97 (106)
T ss_dssp HHHHHHHHHHHH-HHHHHHHHHHHHHH-SSG------GGGTCC----HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-hHHHHHHHHHHHHH-hCH------HhcCCC----HHHHHHHHHHHHHHHHHHH
Confidence 456777777653 45666555433111 233 333444 3357789999999988875
Done!