BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026475
(238 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8BMW7|NIPA3_MOUSE Magnesium transporter NIPA3 OS=Mus musculus GN=Nipal1 PE=1 SV=2
Length = 416
Score = 177 bits (449), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 95/237 (40%), Positives = 139/237 (58%), Gaps = 11/237 (4%)
Query: 1 MLKERLQKMGILGCITCIVGSVVIVIHAPQEHTPNSVQEIWALATQPDFLIYVAATVSVV 60
L ERL G +GCI ++GS V+VIHAPQE S+ E+ P F+ + +
Sbjct: 161 FLNERLNIHGKIGCILSVLGSTVMVIHAPQEGEVTSLHEMEMKLRDPGFVSFAVIISVIS 220
Query: 61 LALVLHFEPRCGQTNILVYLGICSLMGSLTVVSIKAIGIAIKLTLDGISQIAYPQTWFFL 120
L L+L P+ GQTNILVY+ ICSL+G+ +V S+K +GIAIK L+ P + L
Sbjct: 221 LVLILIVAPKKGQTNILVYIAICSLIGAFSVSSVKGLGIAIKELLERKPVYKDPLFFILL 280
Query: 121 TVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASE 180
T+ A+ V TQ+NYLNKALDTFN ++V+P+YYV FT++ + SAI+F++W G I
Sbjct: 281 TMLALSVTTQINYLNKALDTFNTSLVTPIYYVFFTSMVVTCSAILFQEWYGMKAGDIIGT 340
Query: 181 ICGFITVLSGTIILHATREHEQTTAPVGTVTWYVSGDSLKGAEEEHLITIHNSDYYV 237
+ GF T+++G +LHA + +TW + + A++E L N + YV
Sbjct: 341 LSGFFTIINGIFLLHAFKNTN--------ITW---SELMSTAKKEALSPNGNQNSYV 386
>sp|Q3SWX0|NIPA2_BOVIN Magnesium transporter NIPA2 OS=Bos taurus GN=NIPA2 PE=2 SV=1
Length = 360
Score = 175 bits (443), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 88/199 (44%), Positives = 123/199 (61%)
Query: 1 MLKERLQKMGILGCITCIVGSVVIVIHAPQEHTPNSVQEIWALATQPDFLIYVAATVSVV 60
L ERL G +GC+ I+GS V+VIHAP+E ++ E+ P F+++ V V
Sbjct: 103 FLNERLNLHGKIGCLLSILGSTVMVIHAPKEEEIETLNEMSHKLGDPGFVVFATLVVIVS 162
Query: 61 LALVLHFEPRCGQTNILVYLGICSLMGSLTVVSIKAIGIAIKLTLDGISQIAYPQTWFFL 120
L L+ PR GQTNILVY+ ICS++G+++V K +GIAIK G + +P TW L
Sbjct: 163 LILIFVVGPRHGQTNILVYITICSVIGAVSVSCAKGLGIAIKELFAGKPVLQHPLTWILL 222
Query: 121 TVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASE 180
VCV TQ+NYLN+ALD FN +IV+P+YYV FTT I SAI+FK+W V +
Sbjct: 223 LSLIVCVSTQINYLNRALDIFNTSIVTPIYYVFFTTSVITCSAILFKEWQDMPVDDVIGT 282
Query: 181 ICGFITVLSGTIILHATRE 199
+ GF T++ G +LHA ++
Sbjct: 283 LSGFFTIIVGIFLLHAFKD 301
>sp|Q5R7Q3|NIPA2_PONAB Magnesium transporter NIPA2 OS=Pongo abelii GN=NIPA2 PE=2 SV=1
Length = 360
Score = 174 bits (442), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 89/201 (44%), Positives = 128/201 (63%), Gaps = 4/201 (1%)
Query: 1 MLKERLQKMGILGCITCIVGSVVIVIHAPQEHTPNSVQEIWALATQPDFLIYVAATVSVV 60
L ERL G +GC+ I+GS V+VIHAP+E ++ E+ P F+++ AT+ V+
Sbjct: 103 FLNERLNLHGKIGCLLSILGSTVMVIHAPKEEEIETLNEMSHKLGDPGFVVF--ATLVVI 160
Query: 61 LALVLHF--EPRCGQTNILVYLGICSLMGSLTVVSIKAIGIAIKLTLDGISQIAYPQTWF 118
+AL+L F PR GQTNILVY+ ICS++G+ +V +K +GIAIK G + +P W
Sbjct: 161 VALILIFVVGPRHGQTNILVYITICSVIGAFSVSCVKGLGIAIKELFAGKPVLRHPLAWI 220
Query: 119 FLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIA 178
L VCV TQ+NYLN+ALD FN +IV+P+YYV FTT + SAI+FK+W V +
Sbjct: 221 LLLSLIVCVSTQINYLNRALDIFNTSIVTPIYYVFFTTSVLTCSAILFKEWQDMPVDDVI 280
Query: 179 SEICGFITVLSGTIILHATRE 199
+ GF T++ G +LHA ++
Sbjct: 281 GTLSGFFTIIVGIFLLHAFKD 301
>sp|Q8N8Q9|NIPA2_HUMAN Magnesium transporter NIPA2 OS=Homo sapiens GN=NIPA2 PE=2 SV=1
Length = 360
Score = 174 bits (442), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 89/201 (44%), Positives = 128/201 (63%), Gaps = 4/201 (1%)
Query: 1 MLKERLQKMGILGCITCIVGSVVIVIHAPQEHTPNSVQEIWALATQPDFLIYVAATVSVV 60
L ERL G +GC+ I+GS V+VIHAP+E ++ E+ P F+++ AT+ V+
Sbjct: 103 FLNERLNLHGKIGCLLSILGSTVMVIHAPKEEEIETLNEMSHKLGDPGFVVF--ATLVVI 160
Query: 61 LALVLHF--EPRCGQTNILVYLGICSLMGSLTVVSIKAIGIAIKLTLDGISQIAYPQTWF 118
+AL+L F PR GQTNILVY+ ICS++G+ +V +K +GIAIK G + +P W
Sbjct: 161 VALILIFVVGPRHGQTNILVYITICSVIGAFSVSCVKGLGIAIKELFAGKPVLRHPLAWI 220
Query: 119 FLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIA 178
L VCV TQ+NYLN+ALD FN +IV+P+YYV FTT + SAI+FK+W V +
Sbjct: 221 LLLSLIVCVSTQINYLNRALDIFNTSIVTPIYYVFFTTSVLTCSAILFKEWQDMPVDDVI 280
Query: 179 SEICGFITVLSGTIILHATRE 199
+ GF T++ G +LHA ++
Sbjct: 281 GTLSGFFTIIVGIFLLHAFKD 301
>sp|Q9JJC8|NIPA2_MOUSE Magnesium transporter NIPA2 OS=Mus musculus GN=Nipa2 PE=1 SV=1
Length = 359
Score = 174 bits (442), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 86/199 (43%), Positives = 122/199 (61%)
Query: 1 MLKERLQKMGILGCITCIVGSVVIVIHAPQEHTPNSVQEIWALATQPDFLIYVAATVSVV 60
L ERL G +GC+ I+GS V+VIHAP+E ++ E+ P F+++ V V
Sbjct: 103 FLNERLNLHGKIGCLLSILGSTVMVIHAPKEEEIETLNEMSHKLGDPGFVVFATFVVIVA 162
Query: 61 LALVLHFEPRCGQTNILVYLGICSLMGSLTVVSIKAIGIAIKLTLDGISQIAYPQTWFFL 120
L + PR GQTNILVY+ ICS++G+ +V +K +GIAIK L G + +P W L
Sbjct: 163 LIFIFVVGPRHGQTNILVYITICSVIGAFSVSCVKGLGIAIKELLAGKPVLQHPLAWILL 222
Query: 121 TVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASE 180
VCV TQ+NYLN+ALD FN +IV+P+YYV FTT + SAI+FK+W V +
Sbjct: 223 FSLVVCVSTQINYLNRALDIFNTSIVTPIYYVFFTTSVLTCSAILFKEWQDMPVDDVIGT 282
Query: 181 ICGFITVLSGTIILHATRE 199
+ GF T++ G +LHA ++
Sbjct: 283 LSGFFTIIVGIFLLHAFKD 301
>sp|Q5RDB8|NIPA3_PONAB Magnesium transporter NIPA3 OS=Pongo abelii GN=NIPAL1 PE=2 SV=1
Length = 410
Score = 164 bits (414), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 87/203 (42%), Positives = 124/203 (61%)
Query: 1 MLKERLQKMGILGCITCIVGSVVIVIHAPQEHTPNSVQEIWALATQPDFLIYVAATVSVV 60
L E L G +GCI I+GS V+VIHAPQE S+ E+ P F+ + +
Sbjct: 161 FLNEHLNIHGKIGCILSILGSTVMVIHAPQEEEVTSLHEMEMKLRDPGFISFAVIVTVIS 220
Query: 61 LALVLHFEPRCGQTNILVYLGICSLMGSLTVVSIKAIGIAIKLTLDGISQIAYPQTWFFL 120
L L+L P+ GQTNILVY+ ICSL+G+ +V S+K +GIAIK ++ +P + L
Sbjct: 221 LVLILIVAPKKGQTNILVYISICSLIGAFSVSSVKGLGIAIKELIEWKPVYKHPLVFVLL 280
Query: 121 TVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASE 180
V + V TQ+NYLNKALDTFN +IV+P+YYV FT++ + SAI+F++W G I
Sbjct: 281 AVLVLSVTTQINYLNKALDTFNTSIVTPIYYVFFTSMVVTCSAILFQEWYGMTAGDIIGT 340
Query: 181 ICGFITVLSGTIILHATREHEQT 203
+ GF T++ G +LHA + + T
Sbjct: 341 LSGFFTIIIGIFLLHAFKNTDIT 363
>sp|Q6NVV3|NIPA3_HUMAN Magnesium transporter NIPA3 OS=Homo sapiens GN=NIPAL1 PE=2 SV=1
Length = 410
Score = 162 bits (411), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 86/203 (42%), Positives = 124/203 (61%)
Query: 1 MLKERLQKMGILGCITCIVGSVVIVIHAPQEHTPNSVQEIWALATQPDFLIYVAATVSVV 60
L E L G +GCI I+GS V+VIHAPQE S+ E+ P F+ + +
Sbjct: 161 FLNEHLNIHGKIGCILSILGSTVMVIHAPQEEEVTSLHEMEMKLRDPGFISFAVIITVIS 220
Query: 61 LALVLHFEPRCGQTNILVYLGICSLMGSLTVVSIKAIGIAIKLTLDGISQIAYPQTWFFL 120
L L+L P+ GQTNILVY+ ICSL+G+ +V S+K +GIAIK ++ +P + L
Sbjct: 221 LVLILIVAPKKGQTNILVYISICSLIGAFSVSSVKGLGIAIKELIEWKPVYKHPLVFVLL 280
Query: 121 TVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASE 180
V + V TQ+NYLNKALDTFN ++V+P+YYV FT++ + SAI+F++W G I
Sbjct: 281 AVLVLSVTTQINYLNKALDTFNTSLVTPIYYVFFTSMVVTCSAILFQEWYGMTAGDIIGT 340
Query: 181 ICGFITVLSGTIILHATREHEQT 203
+ GF T++ G +LHA + + T
Sbjct: 341 LSGFFTIIIGIFLLHAFKNTDIT 363
>sp|Q0D2K0|NIPA4_HUMAN Magnesium transporter NIPA4 OS=Homo sapiens GN=NIPAL4 PE=1 SV=3
Length = 466
Score = 157 bits (398), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 75/205 (36%), Positives = 126/205 (61%)
Query: 1 MLKERLQKMGILGCITCIVGSVVIVIHAPQEHTPNSVQEIWALATQPDFLIYVAATVSVV 60
L+E L +G LGC+ C+ GS V+VIHAP+E ++ E+ + F+++ +
Sbjct: 211 FLRESLNLLGKLGCVICVAGSTVMVIHAPEEEKVTTIMEMASKMKDTGFIVFAVLLLVSC 270
Query: 61 LALVLHFEPRCGQTNILVYLGICSLMGSLTVVSIKAIGIAIKLTLDGISQIAYPQTWFFL 120
L L+ PR GQ NIL+Y+ ICS++G+ +V ++K +GI IK G+ + +P +
Sbjct: 271 LILIFVIAPRYGQRNILIYIIICSVIGAFSVAAVKGLGITIKNFFQGLPVVRHPLPYILS 330
Query: 121 TVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASE 180
+ A+ + TQ+N+LN+ALD FN ++V P+YYV FTT+ + +S I+FK+W IA
Sbjct: 331 LILALSLSTQVNFLNRALDIFNTSLVFPIYYVFFTTVVVTSSIILFKEWYSMSAVDIAGT 390
Query: 181 ICGFITVLSGTIILHATREHEQTTA 205
+ GF+T++ G +LHA ++ + + A
Sbjct: 391 LSGFVTIILGVFMLHAFKDLDISCA 415
>sp|Q8BZF2|NIPA4_MOUSE Magnesium transporter NIPA4 OS=Mus musculus GN=Nipal4 PE=1 SV=1
Length = 406
Score = 155 bits (393), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 71/200 (35%), Positives = 121/200 (60%)
Query: 2 LKERLQKMGILGCITCIVGSVVIVIHAPQEHTPNSVQEIWALATQPDFLIYVAATVSVVL 61
L E L +G LGC+ C+ GS V+VIHAP+E +V E+ + F+++ V L
Sbjct: 152 LGESLNLLGKLGCVICMAGSTVMVIHAPKEEKVTTVAEMASKMKDTGFIVFAVLLVVSCL 211
Query: 62 ALVLHFEPRCGQTNILVYLGICSLMGSLTVVSIKAIGIAIKLTLDGISQIAYPQTWFFLT 121
L+ PR GQ NIL+Y+ ICS++GS +V ++K +G+ I+ G+ + +P +
Sbjct: 212 ILIFIVAPRYGQRNILIYIIICSVIGSFSVTAVKGLGVTIRNFFQGLPVVRHPLPYILSL 271
Query: 122 VAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEI 181
+ + ++ Q+N+LN+ALD FN ++V P+YYV FTT+ + +S ++FK+W I +
Sbjct: 272 ILGLSIIIQVNFLNRALDIFNTSLVFPIYYVFFTTVVVASSIVLFKEWYTMSAVDIVGTL 331
Query: 182 CGFITVLSGTIILHATREHE 201
GF+T++ G +LHA ++ +
Sbjct: 332 SGFVTIILGVFMLHAFKDLD 351
>sp|Q7RTP0|NIPA1_HUMAN Magnesium transporter NIPA1 OS=Homo sapiens GN=NIPA1 PE=1 SV=1
Length = 329
Score = 133 bits (334), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 76/203 (37%), Positives = 119/203 (58%), Gaps = 2/203 (0%)
Query: 1 MLKERLQKMGILGCITCIVGSVVIVIHAPQEHTPNSVQEIWALATQPDFLIYVAATVSVV 60
+LKE+L +G LGC+ GSVV++IH+P+ + + E+ T P F+ Y+ + ++
Sbjct: 113 LLKEKLNILGKLGCLLSCAGSVVLIIHSPKSESVTTQAELEEKLTNPVFVGYLCIVLLML 172
Query: 61 LALVLHFEPRCGQTNILVYLGICSLMGSLTVVSIKAIGIAIKLTL--DGISQIAYPQTWF 118
L L+ P G TNI+VY+ ICSL+GS TV S K IG+A + L + SQ A
Sbjct: 173 LLLIFWIAPAHGPTNIMVYISICSLLGSFTVPSTKGIGLAAQDILHNNPSSQRALCLCLV 232
Query: 119 FLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIA 178
L V ++ Q Y+NKAL+ F++++ +YYV+FTTL ++ASAI+F++WS +
Sbjct: 233 LLAVLGCSIIVQFRYINKALECFDSSVFGAIYYVVFTTLVLLASAILFREWSNVGLVDFL 292
Query: 179 SEICGFITVLSGTIILHATREHE 201
CGF TV G +++ +E
Sbjct: 293 GMACGFTTVSVGIVLIQVFKEFN 315
>sp|Q8BHK1|NIPA1_MOUSE Magnesium transporter NIPA1 OS=Mus musculus GN=Nipa1 PE=1 SV=1
Length = 323
Score = 133 bits (334), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 76/203 (37%), Positives = 119/203 (58%), Gaps = 2/203 (0%)
Query: 1 MLKERLQKMGILGCITCIVGSVVIVIHAPQEHTPNSVQEIWALATQPDFLIYVAATVSVV 60
+LKE+L +G LGC+ GSVV++IH+P+ + + E+ T P F+ Y+ + ++
Sbjct: 107 LLKEKLNILGKLGCLLSCAGSVVLIIHSPKSESVTTQAELEEKLTNPVFVGYLCIVLLML 166
Query: 61 LALVLHFEPRCGQTNILVYLGICSLMGSLTVVSIKAIGIAIKLTL--DGISQIAYPQTWF 118
L L+ P G TNI+VY+ ICSL+GS TV S K IG+A + L + SQ A
Sbjct: 167 LLLIFWIAPAHGPTNIMVYISICSLLGSFTVPSTKGIGLAAQDILHNNPSSQRALCLCLV 226
Query: 119 FLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIA 178
L V ++ Q Y+NKAL+ F++++ +YYV+FTTL ++ASAI+F++WS +
Sbjct: 227 LLAVLGCSIIVQFRYINKALECFDSSVFGAIYYVVFTTLVLLASAILFREWSNVGLVDFL 286
Query: 179 SEICGFITVLSGTIILHATREHE 201
CGF TV G +++ +E
Sbjct: 287 GMACGFTTVSVGIVLIQVFKEFN 309
>sp|Q6P499|NPAL3_HUMAN NIPA-like protein 3 OS=Homo sapiens GN=NIPAL3 PE=1 SV=1
Length = 406
Score = 82.8 bits (203), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 115/226 (50%), Gaps = 9/226 (3%)
Query: 3 KERLQK--MGILGCITCIVGSVVIVIHAPQEHTPNSVQEIWALATQPDFLIYVAATVSVV 60
K+ L++ + +GC +VG+ ++V AP H + + + FL+Y+ + ++
Sbjct: 128 KDFLRRYVLSFVGCGLAVVGTYLLVTFAPNSHEKMTGENVTRHLVSWPFLLYMLVEI-IL 186
Query: 61 LALVLHFEPRCGQTNILVYLGICSLMGSLTVVSIKAIGIAIKLTLDGISQIAYPQTWFFL 120
L+L+F NI+V L + +L+GS+TVV++KA+ + L++ G Q+ YP +
Sbjct: 187 FCLLLYFYKEKNANNIVVILLLVALLGSMTVVTVKAVAGMLVLSIQGNLQLDYPIFYVMF 246
Query: 121 TVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASE 180
V Q +L++A +++++++ V Y++ TT+ I A AI + D+ G+DV I
Sbjct: 247 VCMVATAVYQAAFLSQASQMYDSSLIASVGYILSTTIAITAGAIFYLDFIGEDVLHICMF 306
Query: 181 ICGFITVLSGTIILHATREHEQTTAPVGTVTWYVSGDSLKGAEEEH 226
G + G ++ R+ P Y+S D++ G + H
Sbjct: 307 ALGCLIAFLGVFLITRNRKKPIPFEP------YISMDAMPGMQNMH 346
>sp|Q5RD30|NPAL3_PONAB NIPA-like protein 3 OS=Pongo abelii GN=NIPAL3 PE=2 SV=1
Length = 406
Score = 79.7 bits (195), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 114/226 (50%), Gaps = 9/226 (3%)
Query: 3 KERLQK--MGILGCITCIVGSVVIVIHAPQEHTPNSVQEIWALATQPDFLIYVAATVSVV 60
K+ L++ + +GC +VG+ ++V AP + + + FL+Y+ + ++
Sbjct: 128 KDFLRRYILSFVGCGLAVVGTYLLVTFAPNSREKMTGENVTRHLVSWPFLLYMLVEI-IL 186
Query: 61 LALVLHFEPRCGQTNILVYLGICSLMGSLTVVSIKAIGIAIKLTLDGISQIAYPQTWFFL 120
L+L+F NI+V L + +L+GS+TVV++KA+ + L++ G Q+ YP +
Sbjct: 187 FCLLLYFYKEKNANNIVVILLLVALLGSMTVVTVKAVAGMLVLSIQGNLQLDYPIFYVMF 246
Query: 121 TVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASE 180
V Q +L++A +++++++ V Y++ TT+ I A AI + D+ G+DV I
Sbjct: 247 VCMVATAVYQAAFLSQASQMYDSSLIASVGYILSTTIAITAGAIFYLDFIGEDVLHICMF 306
Query: 181 ICGFITVLSGTIILHATREHEQTTAPVGTVTWYVSGDSLKGAEEEH 226
G + G ++ R+ P Y+S D++ G + H
Sbjct: 307 ALGCLIAFLGVFLITRNRKKAIPFEP------YISMDAMPGMQNMH 346
>sp|Q9H841|NPAL2_HUMAN NIPA-like protein 2 OS=Homo sapiens GN=NIPAL2 PE=2 SV=1
Length = 368
Score = 77.8 bits (190), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 96/202 (47%), Gaps = 1/202 (0%)
Query: 1 MLKERLQKMGILGCITCIVGSVVIVIHAPQEHTPNSVQEIWALATQPDFLIYVAATVSVV 60
LK+ L+ +LG G+ ++V AP S + + FLIYV + ++
Sbjct: 134 FLKDNLRASDLLGTTLAFAGTYLLVNFAPNITQAISARTVQYYLVGWQFLIYVILEI-LI 192
Query: 61 LALVLHFEPRCGQTNILVYLGICSLMGSLTVVSIKAIGIAIKLTLDGISQIAYPQTWFFL 120
++L+F R G ++++ L + +++ SLTV+S+KA+ I ++ Q+ YP +
Sbjct: 193 FCILLYFYKRKGMKHMVILLTLVAILASLTVISVKAVSGMITFSVMDKMQLTYPIFYIMF 252
Query: 121 TVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASE 180
+ V Q+ +LN+A +N V PV ++ FT IIA I ++++ G +
Sbjct: 253 IIMIASCVFQVKFLNQATKLYNTTTVVPVNHIFFTISAIIAGIIFYQEFLGAPFLTVFIY 312
Query: 181 ICGFITVLSGTIILHATREHEQ 202
+ G G ++ RE E
Sbjct: 313 LFGCFLSFLGVFLVTRNREKEH 334
>sp|Q8BGN5|NPAL3_MOUSE NIPA-like protein 3 OS=Mus musculus GN=Nipal3 PE=2 SV=1
Length = 410
Score = 77.4 bits (189), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 110/222 (49%), Gaps = 7/222 (3%)
Query: 5 RLQKMGILGCITCIVGSVVIVIHAPQEHTPNSVQEIWALATQPDFLIYVAATVSVVLALV 64
R + +GC IVG+ ++V AP H + + I FL+Y+ + V+ L+
Sbjct: 136 RRYVLSFVGCGLAIVGTYLLVTFAPNSHEKMTGENIARHLVSWPFLLYMLVAI-VLFCLL 194
Query: 65 LHFEPRCGQTNILVYLGICSLMGSLTVVSIKAIGIAIKLTLDGISQIAYPQTWFFLTVAA 124
L+F +I+V L + +L+GS+TVV++KA+ + L++ G Q+ YP +
Sbjct: 195 LYFYKERNANSIVVILLLVALLGSMTVVTVKAVSGMLVLSIQGNLQLDYPIFYVMFVCMV 254
Query: 125 VCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGF 184
+ Q +L++A +++++++ V Y++ TT I A AI + D+ G++ I G
Sbjct: 255 ATAIYQATFLSEASQIYDSSLIASVGYILSTTAAITAGAIFYLDFLGEEALHICMFALGC 314
Query: 185 ITVLSGTIILHATREHEQTTAPVGTVTWYVSGDSLKGAEEEH 226
+ G ++ R+ P Y+S D++ G ++ H
Sbjct: 315 LIAFLGVFLITRNRKKAIPFEP------YISMDAMPGMQDMH 350
>sp|Q91WC7|NPAL2_MOUSE NIPA-like protein 2 OS=Mus musculus GN=Nipal2 PE=2 SV=1
Length = 383
Score = 73.6 bits (179), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 99/202 (49%), Gaps = 1/202 (0%)
Query: 1 MLKERLQKMGILGCITCIVGSVVIVIHAPQEHTPNSVQEIWALATQPDFLIYVAATVSVV 60
LKE L+ +LG G+ ++V AP S + + FL+YV + +V
Sbjct: 134 FLKENLRASDLLGMTLAFAGTYLLVNFAPNITQAISARTVQYYFVGWQFLVYVILEI-LV 192
Query: 61 LALVLHFEPRCGQTNILVYLGICSLMGSLTVVSIKAIGIAIKLTLDGISQIAYPQTWFFL 120
++L+F R G +I+V L + +L+ SLTV+S+KA+ I L++ G Q+ Y + L
Sbjct: 193 FCILLYFHKRKGMKHIVVLLTLVALLASLTVISVKAVSGMITLSVTGKMQLTYAIFYIML 252
Query: 121 TVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASE 180
+ V Q+ +LN+A + + V PV +V FTT IIA I ++++ G +
Sbjct: 253 VIMIASCVFQVKFLNQATELYTMTTVVPVNHVFFTTSAIIAGIIFYQEFLGAAFLTVFIY 312
Query: 181 ICGFITVLSGTIILHATREHEQ 202
+ G G ++ RE E
Sbjct: 313 LFGCFLSFLGVFLVTRNREKEH 334
>sp|Q7TPD3|ROBO2_MOUSE Roundabout homolog 2 OS=Mus musculus GN=Robo2 PE=2 SV=2
Length = 1470
Score = 33.5 bits (75), Expect = 1.4, Method: Composition-based stats.
Identities = 13/32 (40%), Positives = 19/32 (59%)
Query: 19 VGSVVIVIHAPQEHTPNSVQEIWALATQPDFL 50
+G VV+ +H P TP +VQ W + QP F+
Sbjct: 638 LGDVVVRLHNPVVLTPTTVQVTWTVDRQPQFI 669
>sp|Q9HCK4|ROBO2_HUMAN Roundabout homolog 2 OS=Homo sapiens GN=ROBO2 PE=1 SV=2
Length = 1378
Score = 32.3 bits (72), Expect = 3.3, Method: Composition-based stats.
Identities = 12/32 (37%), Positives = 19/32 (59%)
Query: 19 VGSVVIVIHAPQEHTPNSVQEIWALATQPDFL 50
+G V++ +H P TP +VQ W + QP F+
Sbjct: 634 LGDVLVRLHNPVVLTPTTVQVTWTVDRQPQFI 665
>sp|A7MBC7|T194A_BOVIN Transmembrane protein 194A OS=Bos taurus GN=TMEM194A PE=2 SV=1
Length = 445
Score = 31.2 bits (69), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 44/102 (43%), Gaps = 10/102 (9%)
Query: 35 NSVQEIWALATQPDFLIYVAATVSVVLALVLHFEPRCGQTNI------LVYLGICSLMGS 88
++QEIW Q L YV A + A+ + P + +I L LG+C + S
Sbjct: 237 KNLQEIWRCYWQ-YLLSYVLAVGFMSFAVCYKYGPLENERSINLLTWTLQLLGLCFMYSS 295
Query: 89 LTVVSIKAIGIAIKLTLDGISQIAYPQTWFFLTVAAVCVVTQ 130
+ I I +AI + + YP W ++T +C T+
Sbjct: 296 ---IQIPHIALAIVVIALCTKNLDYPIHWLYITYRKMCKATE 334
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.136 0.409
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 81,717,118
Number of Sequences: 539616
Number of extensions: 2955264
Number of successful extensions: 9184
Number of sequences better than 100.0: 32
Number of HSP's better than 100.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 9155
Number of HSP's gapped (non-prelim): 36
length of query: 238
length of database: 191,569,459
effective HSP length: 114
effective length of query: 124
effective length of database: 130,053,235
effective search space: 16126601140
effective search space used: 16126601140
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 59 (27.3 bits)