Query 026475
Match_columns 238
No_of_seqs 112 out of 520
Neff 6.3
Searched_HMMs 46136
Date Fri Mar 29 08:28:43 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026475.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/026475hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2922 Uncharacterized conser 100.0 2.6E-59 5.7E-64 420.5 15.1 206 1-206 111-316 (335)
2 PF05653 Mg_trans_NIPA: Magnes 100.0 2.3E-53 5E-58 385.4 15.4 203 1-203 97-299 (300)
3 PRK11453 O-acetylserine/cystei 96.4 0.00097 2.1E-08 60.1 0.4 72 120-198 218-289 (299)
4 TIGR00950 2A78 Carboxylate/Ami 96.4 0.004 8.7E-08 54.1 4.1 71 113-191 187-259 (260)
5 TIGR03340 phn_DUF6 phosphonate 96.3 0.0057 1.2E-07 54.5 5.1 66 121-194 216-281 (281)
6 TIGR00776 RhaT RhaT L-rhamnose 96.3 0.01 2.2E-07 53.6 6.7 173 1-197 107-289 (290)
7 PRK11689 aromatic amino acid e 95.9 0.027 5.9E-07 50.6 7.4 172 1-196 112-287 (295)
8 PLN00411 nodulin MtN21 family 95.5 0.0057 1.2E-07 57.2 1.4 62 133-201 272-333 (358)
9 PF06027 DUF914: Eukaryotic pr 95.2 0.02 4.3E-07 53.3 3.8 62 133-201 249-310 (334)
10 PRK15051 4-amino-4-deoxy-L-ara 94.3 0.1 2.3E-06 40.7 5.3 80 111-197 31-110 (111)
11 PRK02971 4-amino-4-deoxy-L-ara 94.3 0.12 2.6E-06 41.6 5.7 72 122-199 53-125 (129)
12 COG2510 Predicted membrane pro 93.9 0.12 2.7E-06 42.0 5.0 85 104-196 51-139 (140)
13 PRK09541 emrE multidrug efflux 93.4 0.27 5.8E-06 38.6 6.1 81 109-198 25-105 (110)
14 PRK11272 putative DMT superfam 93.2 0.089 1.9E-06 47.1 3.6 66 127-199 223-288 (292)
15 PRK10452 multidrug efflux syst 92.6 0.38 8.3E-06 38.4 6.0 73 122-200 35-107 (120)
16 PRK11431 multidrug efflux syst 92.5 0.43 9.4E-06 37.2 6.1 80 109-197 24-103 (105)
17 PF00893 Multi_Drug_Res: Small 92.3 0.75 1.6E-05 34.6 7.0 67 109-180 24-90 (93)
18 PRK15430 putative chlorampheni 92.2 0.11 2.3E-06 46.8 2.8 43 125-169 222-264 (296)
19 COG0697 RhaT Permeases of the 91.8 0.2 4.2E-06 43.3 3.8 62 129-197 227-288 (292)
20 PF08449 UAA: UAA transporter 91.6 0.28 6.1E-06 44.3 4.7 176 1-195 111-296 (303)
21 TIGR03340 phn_DUF6 phosphonate 91.3 0.55 1.2E-05 41.7 6.2 75 116-197 62-136 (281)
22 PRK10650 multidrug efflux syst 91.3 0.54 1.2E-05 36.9 5.4 78 109-195 30-107 (109)
23 TIGR00688 rarD rarD protein. T 91.0 0.095 2.1E-06 45.8 1.0 47 116-162 207-253 (256)
24 TIGR00817 tpt Tpt phosphate/ph 89.4 0.079 1.7E-06 47.5 -0.9 62 135-203 239-300 (302)
25 PF06800 Sugar_transport: Suga 89.1 3.5 7.6E-05 37.4 9.5 91 109-202 36-128 (269)
26 PF06800 Sugar_transport: Suga 87.9 2 4.2E-05 39.0 7.0 160 9-193 105-268 (269)
27 KOG4510 Permease of the drug/m 86.7 0.36 7.8E-06 44.0 1.6 32 1-32 144-179 (346)
28 TIGR00776 RhaT RhaT L-rhamnose 84.3 5.8 0.00013 35.7 8.3 73 126-201 69-141 (290)
29 PF13536 EmrE: Multidrug resis 81.4 3.7 8E-05 31.5 5.1 65 129-201 47-111 (113)
30 COG4975 GlcU Putative glucose 80.0 1.2 2.7E-05 40.1 2.2 77 127-206 70-146 (288)
31 KOG2766 Predicted membrane pro 79.9 7.6 0.00016 35.5 7.1 29 1-29 125-153 (336)
32 PF00892 EamA: EamA-like trans 79.9 4.5 9.8E-05 30.1 5.1 61 127-194 64-124 (126)
33 PRK10532 threonine and homoser 77.1 14 0.00031 32.9 8.3 82 112-200 203-285 (293)
34 PRK13499 rhamnose-proton sympo 76.6 0.4 8.8E-06 44.9 -2.0 83 114-197 257-342 (345)
35 COG2076 EmrE Membrane transpor 76.4 5.9 0.00013 31.1 4.8 78 110-196 26-103 (106)
36 PF10639 UPF0546: Uncharacteri 63.7 12 0.00027 29.5 4.1 53 136-194 60-112 (113)
37 PF08507 COPI_assoc: COPI asso 59.8 27 0.00059 27.9 5.7 20 176-195 85-104 (136)
38 PRK13499 rhamnose-proton sympo 59.7 21 0.00044 33.6 5.5 71 125-196 82-153 (345)
39 KOG2765 Predicted membrane pro 57.2 5.2 0.00011 38.1 1.1 53 1-53 206-263 (416)
40 PTZ00343 triose or hexose phos 55.1 4.4 9.5E-05 37.5 0.3 63 128-197 283-349 (350)
41 COG0697 RhaT Permeases of the 50.1 46 0.001 28.4 5.9 75 122-202 75-149 (292)
42 PF11970 Git3_C: G protein-cou 46.6 28 0.0006 25.5 3.3 49 143-191 13-61 (76)
43 PRK10452 multidrug efflux syst 40.6 1.8 3.8E-05 34.6 -4.1 31 1-31 78-108 (120)
44 KOG2922 Uncharacterized conser 40.4 74 0.0016 29.8 5.8 108 85-204 32-144 (335)
45 PF07457 DUF1516: Protein of u 40.0 58 0.0013 25.5 4.4 82 112-201 5-90 (110)
46 PF15048 OSTbeta: Organic solu 37.8 13 0.00027 30.0 0.4 32 165-197 26-57 (125)
47 PF07857 DUF1632: CEO family ( 37.5 92 0.002 28.0 5.9 50 151-201 85-139 (254)
48 PF14851 FAM176: FAM176 family 37.1 67 0.0015 26.8 4.6 6 227-232 86-91 (153)
49 TIGR00950 2A78 Carboxylate/Ami 36.8 1.1E+02 0.0023 26.2 6.1 64 126-197 57-120 (260)
50 PF01635 Corona_M: Coronavirus 36.6 12 0.00026 33.1 0.1 23 33-55 4-26 (221)
51 TIGR00881 2A0104 phosphoglycer 34.9 43 0.00092 29.3 3.4 19 144-162 118-136 (379)
52 PF05653 Mg_trans_NIPA: Magnes 34.1 59 0.0013 29.7 4.2 73 121-201 55-127 (300)
53 PF06379 RhaT: L-rhamnose-prot 33.7 1.1E+02 0.0024 28.9 5.9 110 85-195 221-339 (344)
54 PRK15430 putative chlorampheni 31.5 2.1E+02 0.0046 25.4 7.3 68 114-184 70-137 (296)
55 PF06679 DUF1180: Protein of u 30.5 31 0.00068 29.0 1.6 21 176-196 96-116 (163)
56 PF04018 DUF368: Domain of unk 26.5 2.6E+02 0.0056 25.2 6.9 69 118-191 59-127 (257)
57 KOG2533 Permease of the major 25.4 2.3E+02 0.0049 27.8 6.8 60 111-170 369-428 (495)
58 PRK13673 hypothetical protein; 24.1 1.8E+02 0.0039 23.2 4.8 83 112-200 4-87 (118)
59 PF14018 DUF4234: Domain of un 23.6 2E+02 0.0044 20.2 4.7 25 118-142 6-30 (75)
60 PF04276 DUF443: Protein of un 23.5 4.6E+02 0.01 22.3 8.0 57 110-166 86-161 (199)
61 COG2271 UhpC Sugar phosphate p 23.3 4.2E+02 0.0091 26.0 8.0 42 174-215 183-224 (448)
62 COG3926 zliS Lysozyme family p 23.2 1E+02 0.0022 27.6 3.5 29 112-140 222-250 (252)
63 KOG1690 emp24/gp25L/p24 family 23.0 1.3E+02 0.0028 26.4 4.0 30 107-136 178-207 (215)
64 PF08449 UAA: UAA transporter 21.1 5.1E+02 0.011 23.0 7.8 66 129-204 76-144 (303)
65 PF07297 DPM2: Dolichol phosph 20.6 44 0.00096 24.8 0.7 27 174-200 51-77 (78)
66 TIGR00817 tpt Tpt phosphate/ph 20.3 2.7E+02 0.0058 24.6 5.8 61 128-195 76-136 (302)
No 1
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=100.00 E-value=2.6e-59 Score=420.51 Aligned_cols=206 Identities=61% Similarity=1.087 Sum_probs=202.4
Q ss_pred CCCccccccceeeeEeeeeceeEEEEecCCCCCCCCHHHHHHHhcChhhHHHHHHHHHHHHHHhhhhccccCccceeEEE
Q 026475 1 MLKERLQKMGILGCITCIVGSVVIVIHAPQEHTPNSVQEIWALATQPDFLIYVAATVSVVLALVLHFEPRCGQTNILVYL 80 (238)
Q Consensus 1 ~L~E~l~~~~~vG~~lii~G~~liV~~a~~~~~~~t~~eL~~~~~~~~Fl~Y~~~~~~~~~~Li~~~~p~~g~~~~~vy~ 80 (238)
+||||++..|++||++|++|++++|+|+||+++..|++|+++++++|+|++|+.+++++++++++++.||+|++|+++|+
T Consensus 111 ~L~Ekl~~~g~lGc~l~v~Gst~iV~haP~e~~i~t~~el~~~~~~~~Fliy~~~iil~~~il~~~~~p~~g~tnilvyi 190 (335)
T KOG2922|consen 111 FLKEKLNLLGILGCVLCVVGSTTIVIHAPKEQEIESVEEVWELATEPGFLVYVIIIILIVLILIFFYAPRYGQTNILVYI 190 (335)
T ss_pred HHHHHHHHhhhhheeEEecccEEEEEecCcccccccHHHHHHHhcCccHHHHHHHHHHHHHHHheeecccccccceeehh
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeccccccchhhhHHHHHHHHHHhcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhccccceeecchhhhhHHHHHHh
Q 026475 81 GICSLMGSLTVVSIKAIGIAIKLTLDGISQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTII 160 (238)
Q Consensus 81 ~i~~l~gs~tvl~aK~l~~~l~~t~~g~~qf~~~~ty~~l~~lv~tai~Ql~~LNkAL~~fda~~VvPv~~v~ft~~~ii 160 (238)
++|+++||+||+++|+++.+++++++|+||+.+|.||+++++++.|+++|++|||||||+|||++|.|+||++||+.+|+
T Consensus 191 ~i~s~iGS~tV~svKalg~aiklt~~g~~ql~~~~ty~~~l~~~~~~~~Q~~yLNkAL~~fntslV~PiyyV~fTtl~I~ 270 (335)
T KOG2922|consen 191 GICSLIGSLTVMSVKALGIAIKLTFSGNNQLFYPLTWIFLLVVATCVSTQMNYLNKALDLFNTSIVSPIYYVMFTTLVIL 270 (335)
T ss_pred hHhhhhcceeeeeHHHHHHHHHHHhcCCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhcccCCCChhhHHHHHHHHHHHhheeeeeccccCCCCCCCC
Q 026475 161 ASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHATREHEQTTAP 206 (238)
Q Consensus 161 ~g~I~f~e~~~~~~~~~~~f~~G~~ii~~GV~lLs~~~~~~~~~~~ 206 (238)
+|+|+||||++++..|+.+++|||++++.|+++|+++||.+....+
T Consensus 271 as~I~Fkew~~~~~~~i~~~~~Gf~ti~~G~flL~~~kd~~~~~~s 316 (335)
T KOG2922|consen 271 ASAILFKEWSGQDALDIAGELCGFVTIFLGIFLLHRTKDMEISLAS 316 (335)
T ss_pred HHHHHHHHhcCCcHHHHHHHHHhHHHhhheeeEeeeeccccccccc
Confidence 9999999999999999999999999999999999999999976654
No 2
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=100.00 E-value=2.3e-53 Score=385.39 Aligned_cols=203 Identities=44% Similarity=0.793 Sum_probs=198.7
Q ss_pred CCCccccccceeeeEeeeeceeEEEEecCCCCCCCCHHHHHHHhcChhhHHHHHHHHHHHHHHhhhhccccCccceeEEE
Q 026475 1 MLKERLQKMGILGCITCIVGSVVIVIHAPQEHTPNSVQEIWALATQPDFLIYVAATVSVVLALVLHFEPRCGQTNILVYL 80 (238)
Q Consensus 1 ~L~E~l~~~~~vG~~lii~G~~liV~~a~~~~~~~t~~eL~~~~~~~~Fl~Y~~~~~~~~~~Li~~~~p~~g~~~~~vy~ 80 (238)
+||||++++|++||++|++|++++++|+|++++.+|++|+.+++++|+|+.|+++..+..+.++++..||+|++|+++|.
T Consensus 97 ~l~e~~~~~~~~G~~l~i~G~~liv~~~~~~~~~~t~~~l~~~~~~~~fl~y~~~~~~~~~~L~~~~~~r~g~~~i~vyi 176 (300)
T PF05653_consen 97 FLGEKLTRRDIVGCALIILGSVLIVIFAPKEEPIHTLDELIALLSQPGFLVYFILVLVLILILIFFIKPRYGRRNILVYI 176 (300)
T ss_pred HhcccchHhHHhhHHHHHhhheeeEEeCCCCCCcCCHHHHHHHhcCcceehhHHHHHHHHHHHHHhhcchhcccceEEEE
Confidence 58999999999999999999999999999999999999999999999999999999998888888999999999999999
Q ss_pred EEeccccccchhhhHHHHHHHHHHhcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhccccceeecchhhhhHHHHHHh
Q 026475 81 GICSLMGSLTVVSIKAIGIAIKLTLDGISQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTII 160 (238)
Q Consensus 81 ~i~~l~gs~tvl~aK~l~~~l~~t~~g~~qf~~~~ty~~l~~lv~tai~Ql~~LNkAL~~fda~~VvPv~~v~ft~~~ii 160 (238)
++||++||+||+++|+++++++++++|+|||.+|.+|++++++++|+++|++||||||++||+++|+|+||++||+++++
T Consensus 177 ~i~sl~Gs~tvl~~K~i~~~i~~~~~g~~~f~~~~~y~l~~~~v~~~~~Q~~~LN~aL~~fd~~~V~P~~~v~~t~~~i~ 256 (300)
T PF05653_consen 177 SICSLIGSFTVLSAKAISILIKLTFSGDNQFTYPLTYLLLLVLVVTAVLQLYYLNKALKRFDTSLVVPVYYVFFTLSSII 256 (300)
T ss_pred EEeccccchhhhHHHHHHHHHHHHhcCchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhccceEEEeehhHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhcccCCCChhhHHHHHHHHHHHhheeeeeccccCCCCC
Q 026475 161 ASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHATREHEQT 203 (238)
Q Consensus 161 ~g~I~f~e~~~~~~~~~~~f~~G~~ii~~GV~lLs~~~~~~~~ 203 (238)
+|+|+||||++++++|++++++|++++++||++|+.+||+++.
T Consensus 257 ~g~i~f~e~~~~~~~~~~~~~~G~~~ii~GV~lL~~~~~~~~~ 299 (300)
T PF05653_consen 257 GGAIFFQEFSRMTAWQIIGFLCGFLIIIIGVFLLSSSKDKEIS 299 (300)
T ss_pred HHHHHhcccccccHHHHHHHHHHHHHHHHhhheeeccCchhcc
Confidence 9999999999999999999999999999999999999998864
No 3
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=96.40 E-value=0.00097 Score=60.07 Aligned_cols=72 Identities=13% Similarity=0.213 Sum_probs=50.7
Q ss_pred HHHHHHHHHHHHHHHHHhhccccceeecchhhhhHHHHHHhhhhhhhcccCCCChhhHHHHHHHHHHHhheeeeecccc
Q 026475 120 LTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHATR 198 (238)
Q Consensus 120 l~~lv~tai~Ql~~LNkAL~~fda~~VvPv~~v~ft~~~ii~g~I~f~e~~~~~~~~~~~f~~G~~ii~~GV~lLs~~~ 198 (238)
+...+.+.+.+....|+++++.++..+.++.+ +-=..+++-|.++++|- .++.+ ..|..+++.|+++....+
T Consensus 218 ~~l~i~~t~~~~~l~~~~l~~~~a~~~s~~~~-l~Pv~a~~~~~l~lgE~--~~~~~----~iG~~lI~~gv~l~~~~~ 289 (299)
T PRK11453 218 MYLAFVATIVGYGIWGTLLGRYETWRVAPLSL-LVPVVGLASAALLLDER--LTGLQ----FLGAVLIMAGLYINVFGL 289 (299)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHH-HHHHHHHHHHHHHhCCC--ccHHH----HHHHHHHHHHHHHHhcch
Confidence 33335556666777899999999988887655 44567778888888883 44544 567778888988765433
No 4
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=96.37 E-value=0.004 Score=54.05 Aligned_cols=71 Identities=8% Similarity=0.189 Sum_probs=46.6
Q ss_pred hhHHH--HHHHHHHHHHHHHHHHHHHhhccccceeecchhhhhHHHHHHhhhhhhhcccCCCChhhHHHHHHHHHHHhhe
Q 026475 113 YPQTW--FFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSG 190 (238)
Q Consensus 113 ~~~ty--~~l~~lv~tai~Ql~~LNkAL~~fda~~VvPv~~v~ft~~~ii~g~I~f~e~~~~~~~~~~~f~~G~~ii~~G 190 (238)
.+..| ++....+.+.+.+.-| ++|+++-+++.+.++.+ .-...+.+-+.++++| ..++.++. |..+++.|
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~-~~a~~~~~~~~~s~~~~-~~pv~~~ll~~~~~~E--~~~~~~~~----G~~li~~g 258 (260)
T TIGR00950 187 LSLQWGALLYLGLIGTALAYFLW-NKGLTLVDPSAASILAL-AEPLVALLLGLLILGE--TLSLPQLI----GGALIIAA 258 (260)
T ss_pred chHHHHHHHHHHHHHHHHHHHHH-HHHHhcCCchHHHHHHH-HHHHHHHHHHHHHhCC--CCCHHHHH----HHHHHHHh
Confidence 45555 3344444455665554 99999999999998888 4555666677788887 45565544 55555555
Q ss_pred e
Q 026475 191 T 191 (238)
Q Consensus 191 V 191 (238)
+
T Consensus 259 ~ 259 (260)
T TIGR00950 259 V 259 (260)
T ss_pred c
Confidence 4
No 5
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=96.34 E-value=0.0057 Score=54.49 Aligned_cols=66 Identities=9% Similarity=0.145 Sum_probs=46.7
Q ss_pred HHHHHHHHHHHHHHHHhhccccceeecchhhhhHHHHHHhhhhhhhcccCCCChhhHHHHHHHHHHHhheeeee
Q 026475 121 TVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIIL 194 (238)
Q Consensus 121 ~~lv~tai~Ql~~LNkAL~~fda~~VvPv~~v~ft~~~ii~g~I~f~e~~~~~~~~~~~f~~G~~ii~~GV~lL 194 (238)
...+.+++ -....|+|+++.+++.+.|..|.. -..+++-|.++++|- .++. -..|..+++.|++++
T Consensus 216 ~~~~~s~l-~~~l~~~al~~~~a~~~~~~~~l~-pv~a~l~g~~~lgE~--~~~~----~~iG~~lil~Gv~l~ 281 (281)
T TIGR03340 216 LGGLMIGG-AYALVLWAMTRLPVATVVALRNTS-IVFAVVLGIWFLNER--WYLT----RLMGVCIIVAGLVVL 281 (281)
T ss_pred HHHHHHHH-HHHHHHHHHhhCCceEEEeecccH-HHHHHHHHHHHhCCC--ccHH----HHHHHHHHHHhHHhC
Confidence 33333444 444678999999999999999875 566777788889984 3343 345666788887764
No 6
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=96.32 E-value=0.01 Score=53.56 Aligned_cols=173 Identities=10% Similarity=0.065 Sum_probs=97.6
Q ss_pred CCCccccccc----eeeeEeeeeceeEEEEecCCCCCCCCHHHHHHHhcChhhHHHHHHHHHHHHHHhhhhccccCccce
Q 026475 1 MLKERLQKMG----ILGCITCIVGSVVIVIHAPQEHTPNSVQEIWALATQPDFLIYVAATVSVVLALVLHFEPRCGQTNI 76 (238)
Q Consensus 1 ~L~E~l~~~~----~vG~~lii~G~~liV~~a~~~~~~~t~~eL~~~~~~~~Fl~Y~~~~~~~~~~Li~~~~p~~g~~~~ 76 (238)
++||+.++++ .+|.+++++|+.++..+.+++.+ .++.. ..+.=+.+..+.. +.+-.+...+|+-+
T Consensus 107 ~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~~~~~~~---~~~~~---~~~~Gi~~~l~sg--~~y~~~~~~~~~~~--- 175 (290)
T TIGR00776 107 VFGEWSTSIQTLLGLLALILIIIGVYLTSRSKDKSAG---IKSEF---NFKKGILLLLMST--IGYLVYVVVAKAFG--- 175 (290)
T ss_pred HhhhccchHHHHHHHHHHHHHHHhHheEEeccccccc---ccccc---chhhHHHHHHHHH--HHHHHHHHHHHHcC---
Confidence 3689999999 99999999998888666433221 11100 1111122222221 11211222333211
Q ss_pred eEEEEEeccccccchhhhHHHH----HHHHHHhcCC-CCcchhHHHHHHHHHHHHHHHHHHHHHHhhc-cccceeecchh
Q 026475 77 LVYLGICSLMGSLTVVSIKAIG----IAIKLTLDGI-SQIAYPQTWFFLTVAAVCVVTQLNYLNKALD-TFNAAIVSPVY 150 (238)
Q Consensus 77 ~vy~~i~~l~gs~tvl~aK~l~----~~l~~t~~g~-~qf~~~~ty~~l~~lv~tai~Ql~~LNkAL~-~fda~~VvPv~ 150 (238)
.++.+..+..+.+ .++-....-+ +++.....|..++.-+.+ ..+......+++ +=+++.-.++-
T Consensus 176 ---------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~-~ia~~~y~~~~~~~~~~~~~~~ls 245 (290)
T TIGR00776 176 ---------VDGLSVLLPQAIGMVIGGIIFNLGHILAKPLKKYAILLNILPGLMW-GIGNFFYLFSAQPKVGVATSFSLS 245 (290)
T ss_pred ---------CCcceehhHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHH-HHHHHHHHHHcccccchhhHHHHH
Confidence 2233333333331 1111111100 222333334333322334 666666778888 56666666666
Q ss_pred hhhHHHHHHhhhhhhhcccCCCChhhHHHHHHHHHHHhheeeeeccc
Q 026475 151 YVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHAT 197 (238)
Q Consensus 151 ~v~ft~~~ii~g~I~f~e~~~~~~~~~~~f~~G~~ii~~GV~lLs~~ 197 (238)
+.- -..+.+.|..+++|-. ++.|+....+|+.+++.|+.++...
T Consensus 246 ~~~-pvia~~~~v~~l~E~~--~~~~~~~~~iG~~lIi~~~~l~~~~ 289 (290)
T TIGR00776 246 QLG-VIISTLGGILILGEKK--TKREMIAISVGIILIIIAANILGIG 289 (290)
T ss_pred HHH-HHHHHHHHHHHhccCC--CcceeehhHHHHHHHHHHHHHHhcc
Confidence 666 8889999999999965 7899999999999999999987654
No 7
>PRK11689 aromatic amino acid exporter; Provisional
Probab=95.92 E-value=0.027 Score=50.63 Aligned_cols=172 Identities=14% Similarity=0.114 Sum_probs=86.1
Q ss_pred CCCccccccceeeeEeeeeceeEEEEecCCCCCCCCHHHHHHHhcChhhHHHHHHHHHHHHHHhh-hhccccCccc-eeE
Q 026475 1 MLKERLQKMGILGCITCIVGSVVIVIHAPQEHTPNSVQEIWALATQPDFLIYVAATVSVVLALVL-HFEPRCGQTN-ILV 78 (238)
Q Consensus 1 ~L~E~l~~~~~vG~~lii~G~~liV~~a~~~~~~~t~~eL~~~~~~~~Fl~Y~~~~~~~~~~Li~-~~~p~~g~~~-~~v 78 (238)
++|||++++..+|++++..|..++...++ ..+.+++.....+ ....+........+.-.+ ...+|+.++. +..
T Consensus 112 ~~~e~~~~~~~~g~~l~~~Gv~li~~~~~----~~~~~~~~~~~~~-~~~G~~~~l~aa~~~A~~~v~~k~~~~~~~~~~ 186 (295)
T PRK11689 112 FNGQKANWLLIPGLLLALAGVAWVLGGDN----GLSLAELINNIAS-NPLSYGLAFIGAFIWAAYCNVTRKYARGKNGIT 186 (295)
T ss_pred HhcCCccHHHHHHHHHHHHhHhheecCCc----cchhhhhhhcccc-ChHHHHHHHHHHHHHHHHHHHHhhccCCCCchh
Confidence 47999999999999999999988764321 1122221111111 111222222222222111 2233433221 211
Q ss_pred EEEEeccccccchhhhHHHHHHHHHHhcCCCC-cchhHHHHHHHH-HHHHHHHHHHHHHHhhccccceeecchhhhhHHH
Q 026475 79 YLGICSLMGSLTVVSIKAIGIAIKLTLDGISQ-IAYPQTWFFLTV-AAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTT 156 (238)
Q Consensus 79 y~~i~~l~gs~tvl~aK~l~~~l~~t~~g~~q-f~~~~ty~~l~~-lv~tai~Ql~~LNkAL~~fda~~VvPv~~v~ft~ 156 (238)
+ ....+ +....+-..+.+... -..+..|..++. .+.+++.+.-| |+|+++-+++.+.+..|. --.
T Consensus 187 ~---~~~~~--------~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~t~~~~~l~-~~al~~~~a~~~s~~~~l-~Pv 253 (295)
T PRK11689 187 L---FFILT--------ALALWIKYFLSPQPAMVFSLPAIIKLLLAAAAMGFGYAAW-NVGILHGNMTLLATASYF-TPV 253 (295)
T ss_pred H---HHHHH--------HHHHHHHHHHhcCccccCCHHHHHHHHHHHHHHHHHHHHH-HHHHHccCHHHHHHHHHh-HHH
Confidence 1 00001 111111112222221 123334432222 23455555555 999999999977776664 345
Q ss_pred HHHhhhhhhhcccCCCChhhHHHHHHHHHHHhheeeeecc
Q 026475 157 LTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHA 196 (238)
Q Consensus 157 ~~ii~g~I~f~e~~~~~~~~~~~f~~G~~ii~~GV~lLs~ 196 (238)
.+++-|.++++|- .++. ...|+.+++.|+++...
T Consensus 254 ~a~i~~~~~lgE~--~~~~----~~iG~~lI~~gv~~~~~ 287 (295)
T PRK11689 254 LSAALAALLLSTP--LSFS----FWQGVAMVTAGSLLCWL 287 (295)
T ss_pred HHHHHHHHHhCCC--CcHH----HHHHHHHHHHhHHHHhh
Confidence 5677778888873 3443 45677788888876543
No 8
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=95.53 E-value=0.0057 Score=57.24 Aligned_cols=62 Identities=11% Similarity=0.102 Sum_probs=44.4
Q ss_pred HHHHhhccccceeecchhhhhHHHHHHhhhhhhhcccCCCChhhHHHHHHHHHHHhheeeeeccccCCC
Q 026475 133 YLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHATREHE 201 (238)
Q Consensus 133 ~LNkAL~~fda~~VvPv~~v~ft~~~ii~g~I~f~e~~~~~~~~~~~f~~G~~ii~~GV~lLs~~~~~~ 201 (238)
.-|+++++-+++...+..+.. -+.+.+.|.++++| .+++.+ ++|.++++.|+++.++.+.++
T Consensus 272 lw~~~v~~~ga~~as~~~~L~-PV~a~llg~l~LgE--~lt~~~----~iG~~LIl~Gv~l~~~~~~~~ 333 (358)
T PLN00411 272 IHSWTVRHKGPLYLAIFKPLS-ILIAVVMGAIFLND--SLYLGC----LIGGILITLGFYAVMWGKANE 333 (358)
T ss_pred HHHHHHhccCchHHHHHHhHH-HHHHHHHHHHHhCC--CCcHHH----HHHHHHHHHHHHHHHhhhhhh
Confidence 589999999999876665543 44566677788887 345544 478889999999987544333
No 9
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=95.21 E-value=0.02 Score=53.30 Aligned_cols=62 Identities=13% Similarity=0.122 Sum_probs=41.2
Q ss_pred HHHHhhccccceeecchhhhhHHHHHHhhhhhhhcccCCCChhhHHHHHHHHHHHhheeeeeccccCCC
Q 026475 133 YLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHATREHE 201 (238)
Q Consensus 133 ~LNkAL~~fda~~VvPv~~v~ft~~~ii~g~I~f~e~~~~~~~~~~~f~~G~~ii~~GV~lLs~~~~~~ 201 (238)
..+-.+++=+|+.+.. --..=..-+++.+..+|++- .++ .++.|+++++.|+++.+..+++.
T Consensus 249 l~p~~l~~ssAt~~nL-sLLTsd~~ali~~i~~f~~~--~~~----ly~~af~lIiiG~vvy~~~~~~~ 310 (334)
T PF06027_consen 249 LVPIVLRMSSATFFNL-SLLTSDFYALIIDIFFFGYK--FSW----LYILAFALIIIGFVVYNLAESPE 310 (334)
T ss_pred HHHHHHHhCccceeeh-HHHHhhHHHHHHHHHhcCcc--ccH----HHHHHHHHHHHHhheEEccCCcc
Confidence 3455677777764443 33334455778888888873 233 57788899999999988655544
No 10
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=94.32 E-value=0.1 Score=40.74 Aligned_cols=80 Identities=15% Similarity=0.230 Sum_probs=58.1
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHhhccccceeecchhhhhHHHHHHhhhhhhhcccCCCChhhHHHHHHHHHHHhhe
Q 026475 111 IAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSG 190 (238)
Q Consensus 111 f~~~~ty~~l~~lv~tai~Ql~~LNkAL~~fda~~VvPv~~v~ft~~~ii~g~I~f~e~~~~~~~~~~~f~~G~~ii~~G 190 (238)
+.+|.......+.+.+...-...+-+++++-|.+..+|+-+ .=...+.+.|..+|+| +.++.+++ |..+++.|
T Consensus 31 ~~~~~~l~~~~~~~~~~~l~~~~~~~al~~iplg~Ay~~~~-l~~v~~~~~~~l~f~E--~ls~~~~~----Gi~lii~G 103 (111)
T PRK15051 31 KRRKHIVLWLGLALACLGLAMVLWLLVLQNVPVGIAYPMLS-LNFVWVTLAAVKLWHE--PVSPRHWC----GVAFIIGG 103 (111)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHH-HHHHHHHHHHHHHhCC--CCCHHHHH----HHHHHHHH
Confidence 34444334444555666678889999999999999999999 5555667788889998 56676654 66677788
Q ss_pred eeeeccc
Q 026475 191 TIILHAT 197 (238)
Q Consensus 191 V~lLs~~ 197 (238)
|.+++.+
T Consensus 104 v~~i~~~ 110 (111)
T PRK15051 104 IVILGST 110 (111)
T ss_pred HHHHhcc
Confidence 8777643
No 11
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=94.25 E-value=0.12 Score=41.61 Aligned_cols=72 Identities=11% Similarity=0.153 Sum_probs=54.9
Q ss_pred HHHHHHHHHHHHHHHhhccccceeecchhhhhHHHHHHhhhh-hhhcccCCCChhhHHHHHHHHHHHhheeeeeccccC
Q 026475 122 VAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASA-IMFKDWSGQDVSGIASEICGFITVLSGTIILHATRE 199 (238)
Q Consensus 122 ~lv~tai~Ql~~LNkAL~~fda~~VvPv~~v~ft~~~ii~g~-I~f~e~~~~~~~~~~~f~~G~~ii~~GV~lLs~~~~ 199 (238)
.-+++-+.-....+.+|++.|.+..+|+....+....+.+-. ++|+| .+++.+ ..|..+++.||++++..++
T Consensus 53 lgl~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E--~ls~~~----~iGi~lIi~GV~lv~~~~~ 125 (129)
T PRK02971 53 LGLAGYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNE--TFSLKK----TLGVACIMLGVWLINLPTT 125 (129)
T ss_pred HHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCC--CCCHHH----HHHHHHHHHHHHHhccCCC
Confidence 345566667788899999999999999998888666666654 48998 345544 5688899999999986544
No 12
>COG2510 Predicted membrane protein [Function unknown]
Probab=93.88 E-value=0.12 Score=41.98 Aligned_cols=85 Identities=21% Similarity=0.361 Sum_probs=56.7
Q ss_pred HhcCCCCcc---hhHHHHHHHHH-HHHHHHHHHHHHHhhccccceeecchhhhhHHHHHHhhhhhhhcccCCCChhhHHH
Q 026475 104 TLDGISQIA---YPQTWFFLTVA-AVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIAS 179 (238)
Q Consensus 104 t~~g~~qf~---~~~ty~~l~~l-v~tai~Ql~~LNkAL~~fda~~VvPv~~v~ft~~~ii~g~I~f~e~~~~~~~~~~~ 179 (238)
...|+-|-. .+..|.+++.- +.++..++.| =+||+.-+++.|+|+--. .-..+++=|.++.+| +++..++
T Consensus 51 ~~~g~~~~~~~~~~k~~lflilSGla~glswl~Y-f~ALk~G~as~VvPldk~-svvl~~lls~lfL~E--~ls~~~~-- 124 (140)
T COG2510 51 LVTGNWQAGGEIGPKSWLFLILSGLAGGLSWLLY-FRALKKGKASRVVPLDKT-SVVLAVLLSILFLGE--RLSLPTW-- 124 (140)
T ss_pred HhcCceecccccCcceehhhhHHHHHHHHHHHHH-HHHHhcCCcceEEEcccc-cHHHHHHHHHHHhcC--CCCHHHH--
Confidence 345665544 56666554443 3344444443 589999999999998643 233455567888887 4555544
Q ss_pred HHHHHHHHhheeeeecc
Q 026475 180 EICGFITVLSGTIILHA 196 (238)
Q Consensus 180 f~~G~~ii~~GV~lLs~ 196 (238)
.|+..+.+|+.+++.
T Consensus 125 --iG~~LI~~Gailvs~ 139 (140)
T COG2510 125 --IGIVLIVIGAILVSL 139 (140)
T ss_pred --HHHHHHHhCeeeEec
Confidence 688899999999975
No 13
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=93.38 E-value=0.27 Score=38.61 Aligned_cols=81 Identities=14% Similarity=0.194 Sum_probs=60.3
Q ss_pred CCcchhHHHHHHHHHHHHHHHHHHHHHHhhccccceeecchhhhhHHHHHHhhhhhhhcccCCCChhhHHHHHHHHHHHh
Q 026475 109 SQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVL 188 (238)
Q Consensus 109 ~qf~~~~ty~~l~~lv~tai~Ql~~LNkAL~~fda~~VvPv~~v~ft~~~ii~g~I~f~e~~~~~~~~~~~f~~G~~ii~ 188 (238)
+.|++|.++.. .+++...-..+|.+|+++.|-+..+|+--..=+..+.+-|.++|+| .+++.++ .|..+++
T Consensus 25 ~gf~~~~~~i~---~~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e--~~~~~~~----~gi~lIi 95 (110)
T PRK09541 25 EGFTRLWPSVG---TIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQ--RLDLPAI----IGMMLIC 95 (110)
T ss_pred cCCCchhHHHH---HHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCC--CCCHHHH----HHHHHHH
Confidence 34777777663 4566667788999999999988877776655566777889999998 3455544 5778899
Q ss_pred heeeeecccc
Q 026475 189 SGTIILHATR 198 (238)
Q Consensus 189 ~GV~lLs~~~ 198 (238)
.||.++...+
T Consensus 96 ~GVi~l~l~~ 105 (110)
T PRK09541 96 AGVLVINLLS 105 (110)
T ss_pred HHHHHHhcCC
Confidence 9999986543
No 14
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=93.24 E-value=0.089 Score=47.15 Aligned_cols=66 Identities=6% Similarity=0.040 Sum_probs=46.3
Q ss_pred HHHHHHHHHHhhccccceeecchhhhhHHHHHHhhhhhhhcccCCCChhhHHHHHHHHHHHhheeeeeccccC
Q 026475 127 VVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHATRE 199 (238)
Q Consensus 127 ai~Ql~~LNkAL~~fda~~VvPv~~v~ft~~~ii~g~I~f~e~~~~~~~~~~~f~~G~~ii~~GV~lLs~~~~ 199 (238)
.+.-....|+++++.+++.+.++.|.-= ..+.+-|.++++|- +++.+ ..|+.+++.|+++++.++.
T Consensus 223 s~~~~~l~~~~~~~~~~~~~s~~~~l~P-i~a~i~~~~~l~E~--~t~~~----iiG~~lIi~gv~~~~~~~~ 288 (292)
T PRK11272 223 SIIAISAYMYLLRNVRPALATSYAYVNP-VVAVLLGTGLGGET--LSPIE----WLALGVIVFAVVLVTLGKY 288 (292)
T ss_pred HHHHHHHHHHHHhhcCHHHHHHHHHHHH-HHHHHHHHHHcCCC--CcHHH----HHHHHHHHHHHHHHHHHHh
Confidence 3444567799999999988888766544 44555567777773 45544 5688889999998876544
No 15
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=92.60 E-value=0.38 Score=38.41 Aligned_cols=73 Identities=12% Similarity=0.288 Sum_probs=55.2
Q ss_pred HHHHHHHHHHHHHHHhhccccceeecchhhhhHHHHHHhhhhhhhcccCCCChhhHHHHHHHHHHHhheeeeeccccCC
Q 026475 122 VAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHATREH 200 (238)
Q Consensus 122 ~lv~tai~Ql~~LNkAL~~fda~~VvPv~~v~ft~~~ii~g~I~f~e~~~~~~~~~~~f~~G~~ii~~GV~lLs~~~~~ 200 (238)
..+++...=.++|.+|++.-|-++-+|+.-..=+..+.+.|.++|+| .++..+ .+|+.+++.||.++....++
T Consensus 35 ~~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E--~~s~~~----~~gi~lIi~GVi~l~l~~~~ 107 (120)
T PRK10452 35 LMLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDE--SLSLMK----IAGLTTLVAGIVLIKSGTRK 107 (120)
T ss_pred HHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCC--CCCHHH----HHHHHHHHHHHHHhhcCCCC
Confidence 35566667789999999999999888876556666677779999998 345544 46788899999998655543
No 16
>PRK11431 multidrug efflux system protein; Provisional
Probab=92.49 E-value=0.43 Score=37.17 Aligned_cols=80 Identities=9% Similarity=0.150 Sum_probs=56.6
Q ss_pred CCcchhHHHHHHHHHHHHHHHHHHHHHHhhccccceeecchhhhhHHHHHHhhhhhhhcccCCCChhhHHHHHHHHHHHh
Q 026475 109 SQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVL 188 (238)
Q Consensus 109 ~qf~~~~ty~~l~~lv~tai~Ql~~LNkAL~~fda~~VvPv~~v~ft~~~ii~g~I~f~e~~~~~~~~~~~f~~G~~ii~ 188 (238)
+.|++|.++++. +++...=.++|.+|+|.-|....+++.-..=+..+.+-|.++|+| +.++.++ +|+..++
T Consensus 24 ~gf~~~~~~~~~---i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e--~~~~~~~----~gi~lIi 94 (105)
T PRK11431 24 HGFSRLTPSIIT---VTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGE--SASPARL----LSLALIV 94 (105)
T ss_pred hCCccHHHHHHH---HHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCC--CCCHHHH----HHHHHHH
Confidence 457788777754 455566788999999988877655555444455566668999998 4455554 5678889
Q ss_pred heeeeeccc
Q 026475 189 SGTIILHAT 197 (238)
Q Consensus 189 ~GV~lLs~~ 197 (238)
.||..|...
T Consensus 95 ~GVv~l~l~ 103 (105)
T PRK11431 95 AGIIGLKLS 103 (105)
T ss_pred HHHHhhhcc
Confidence 999888644
No 17
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=92.26 E-value=0.75 Score=34.63 Aligned_cols=67 Identities=12% Similarity=0.084 Sum_probs=33.3
Q ss_pred CCcchhHHHHHHHHHHHHHHHHHHHHHHhhccccceeecchhhhhHHHHHHhhhhhhhcccCCCChhhHHHH
Q 026475 109 SQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASE 180 (238)
Q Consensus 109 ~qf~~~~ty~~l~~lv~tai~Ql~~LNkAL~~fda~~VvPv~~v~ft~~~ii~g~I~f~e~~~~~~~~~~~f 180 (238)
+.+.++..++. .+.+-..-..++.+|+|+-|.++.+|+.-..=+....+.|..+|+| ..++.++++.
T Consensus 24 ~g~~~~~~~~~---~~~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E--~~s~~~~~gi 90 (93)
T PF00893_consen 24 HGFTQLIPTIL---AVVGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGE--SLSLSKWLGI 90 (93)
T ss_dssp ----------H---HHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH----------HHHH
T ss_pred HhhcchhhHHH---HHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCC--CCCHHHHhhe
Confidence 34556655543 3346666778999999999999999999877778888889999998 4566666554
No 18
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=92.25 E-value=0.11 Score=46.78 Aligned_cols=43 Identities=14% Similarity=0.172 Sum_probs=33.5
Q ss_pred HHHHHHHHHHHHhhccccceeecchhhhhHHHHHHhhhhhhhccc
Q 026475 125 VCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDW 169 (238)
Q Consensus 125 ~tai~Ql~~LNkAL~~fda~~VvPv~~v~ft~~~ii~g~I~f~e~ 169 (238)
.+++.|. ..|+|+++.+++.+.|..|.-=.. +++-|.++++|-
T Consensus 222 ~t~i~~~-~~~~a~~~~~a~~~s~~~~l~Pv~-a~~~g~l~l~E~ 264 (296)
T PRK15430 222 VTTVPLL-CFTAAATRLRLSTLGFFQYIGPTL-MFLLAVTFYGEK 264 (296)
T ss_pred HHHHHHH-HHHHHHhcCCHHHHHHHHHHHHHH-HHHHHHHHHcCC
Confidence 5666666 889999999999999888866544 556677788873
No 19
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=91.82 E-value=0.2 Score=43.32 Aligned_cols=62 Identities=11% Similarity=0.148 Sum_probs=43.0
Q ss_pred HHHHHHHHhhccccceeecchhhhhHHHHHHhhhhhhhcccCCCChhhHHHHHHHHHHHhheeeeeccc
Q 026475 129 TQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHAT 197 (238)
Q Consensus 129 ~Ql~~LNkAL~~fda~~VvPv~~v~ft~~~ii~g~I~f~e~~~~~~~~~~~f~~G~~ii~~GV~lLs~~ 197 (238)
.-....++++++-+++.+.|..+ .-...+++-+.++++|- .+..++ .|..+++.|+.+...+
T Consensus 227 i~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~l~~~e~--~~~~~~----~G~~li~~g~~l~~~~ 288 (292)
T COG0697 227 LAYLLWYYALRLLGASLVALLSL-LEPVFAALLGVLLLGEP--LSPAQL----LGAALVVLGVLLASLR 288 (292)
T ss_pred HHHHHHHHHHHhcCchHHHHHHH-HHHHHHHHHHHHHhCCC--CcHHHH----HHHHHHHHHHHHHhcc
Confidence 34556689999999999999883 34444555678888874 244444 4557888888877655
No 20
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=91.62 E-value=0.28 Score=44.28 Aligned_cols=176 Identities=14% Similarity=0.191 Sum_probs=90.4
Q ss_pred CCCccccccceeeeEeeeeceeEEEEecCCCCCCCCHHHHHHHhcChhhHHHHHHHHHHHH--HH-hh--hhccccCccc
Q 026475 1 MLKERLQKMGILGCITCIVGSVVIVIHAPQEHTPNSVQEIWALATQPDFLIYVAATVSVVL--AL-VL--HFEPRCGQTN 75 (238)
Q Consensus 1 ~L~E~l~~~~~vG~~lii~G~~liV~~a~~~~~~~t~~eL~~~~~~~~Fl~Y~~~~~~~~~--~L-i~--~~~p~~g~~~ 75 (238)
++|+|.+++++++++++.+|..+......++++..+.+.-.... .++.+..-..+ +. .+ +...+|+...
T Consensus 111 ~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~~~~~~~~~~~~------G~~ll~~sl~~~a~~~~~qe~~~~~~~~~~ 184 (303)
T PF08449_consen 111 ILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSSSSNSSSFSSAL------GIILLLLSLLLDAFTGVYQEKLFKKYGKSP 184 (303)
T ss_pred hcCccccHHHHHHHHHHHhhHheeeecccccccccccccccchh------HHHHHHHHHHHHHHHHHHHHHHHHHhCCcH
Confidence 57999999999999999999998887765555433222111000 22211111111 01 10 1223444332
Q ss_pred --eeEEEEEeccccccchhhhHHHHHHH-HHHhcCC--CCcchhHHHHHHHHHHHHHHHHHHHHHHhhccccceeecchh
Q 026475 76 --ILVYLGICSLMGSLTVVSIKAIGIAI-KLTLDGI--SQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVY 150 (238)
Q Consensus 76 --~~vy~~i~~l~gs~tvl~aK~l~~~l-~~t~~g~--~qf~~~~ty~~l~~lv~tai~Ql~~LNkAL~~fda~~VvPv~ 150 (238)
.+.|...-++.- .=.....+ ..-+... -...||..+..++....+...-..+.+.-.+++++....=+.
T Consensus 185 ~~~mfy~n~~~~~~------~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~s~~~~~g~~~i~~~~~~~~al~~t~v~ 258 (303)
T PF08449_consen 185 WELMFYTNLFSLPF------LLILLFLLPTGEFRSAIRFISAHPSVLLYLLLFSLTGALGQFFIFYLIKKFSALTTTIVT 258 (303)
T ss_pred HHHHHHHHHHHHHH------HHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchhhhhHH
Confidence 122221111110 00000000 0000000 013577777666666666665556778888898887655443
Q ss_pred hhhHHHHHHhhhhhhhcccCCCChhhHHHHHHHHHHHhheeeeec
Q 026475 151 YVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILH 195 (238)
Q Consensus 151 ~v~ft~~~ii~g~I~f~e~~~~~~~~~~~f~~G~~ii~~GV~lLs 195 (238)
=+= ...+++-|.++|++ .+++.|+++. .+++.|..+=+
T Consensus 259 t~R-k~~sillS~~~f~~--~~~~~~~~G~----~lv~~g~~~~~ 296 (303)
T PF08449_consen 259 TLR-KFLSILLSVIIFGH--PLSPLQWIGI----VLVFAGIFLYS 296 (303)
T ss_pred HHH-HHHHHHHHHHhcCC--cCChHHHHHH----HHhHHHHHHHH
Confidence 322 45667778888874 7788777654 45666665544
No 21
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=91.27 E-value=0.55 Score=41.72 Aligned_cols=75 Identities=17% Similarity=0.287 Sum_probs=56.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccccceeecchhhhhHHHHHHhhhhhhhcccCCCChhhHHHHHHHHHHHhheeeeec
Q 026475 116 TWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILH 195 (238)
Q Consensus 116 ty~~l~~lv~tai~Ql~~LNkAL~~fda~~VvPv~~v~ft~~~ii~g~I~f~e~~~~~~~~~~~f~~G~~ii~~GV~lLs 195 (238)
.|..++...........++++|+++-|++...|+.|.. -..+.+-|.++++| +.+.++++ |..+.+.|+.++.
T Consensus 62 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~-p~~~~l~~~~~~~e--~~~~~~~~----g~~~~~~Gv~ll~ 134 (281)
T TIGR03340 62 FWLLLAISAVANMVYFLGLAQAYHHADVGLVYPLARSS-PLLVAIWATLTLGE--TLSPLAWL----GILIITLGLLVLG 134 (281)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhcCChhhhhhHHhhh-HHHHHHHHHHHHcC--CCCHHHHH----HHHHHHHHHHHHh
Confidence 34444445555667778899999999999999999987 77777778888997 46777766 5566667887776
Q ss_pred cc
Q 026475 196 AT 197 (238)
Q Consensus 196 ~~ 197 (238)
.+
T Consensus 135 ~~ 136 (281)
T TIGR03340 135 LS 136 (281)
T ss_pred cc
Confidence 43
No 22
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=91.27 E-value=0.54 Score=36.89 Aligned_cols=78 Identities=14% Similarity=0.251 Sum_probs=57.0
Q ss_pred CCcchhHHHHHHHHHHHHHHHHHHHHHHhhccccceeecchhhhhHHHHHHhhhhhhhcccCCCChhhHHHHHHHHHHHh
Q 026475 109 SQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVL 188 (238)
Q Consensus 109 ~qf~~~~ty~~l~~lv~tai~Ql~~LNkAL~~fda~~VvPv~~v~ft~~~ii~g~I~f~e~~~~~~~~~~~f~~G~~ii~ 188 (238)
+.|++|.+.+. ++++...=.++|.+|+|.-|-...+|+--..=+..+.+.|.++|+|- .++.++ .|+..++
T Consensus 30 ~gf~~~~~~~~---~~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~--~~~~~~----~gi~lIi 100 (109)
T PRK10650 30 DGFRRKIYGIL---SLAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQR--LNRKGW----IGLVLLL 100 (109)
T ss_pred cCCcchHHHHH---HHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCC--CCHHHH----HHHHHHH
Confidence 45777777554 34555566789999999988887777766666677778899999983 455554 4667788
Q ss_pred heeeeec
Q 026475 189 SGTIILH 195 (238)
Q Consensus 189 ~GV~lLs 195 (238)
.||.++.
T Consensus 101 ~GVi~lk 107 (109)
T PRK10650 101 AGMVMIK 107 (109)
T ss_pred HHHHHhc
Confidence 8887763
No 23
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=90.99 E-value=0.095 Score=45.81 Aligned_cols=47 Identities=19% Similarity=0.284 Sum_probs=30.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccccceeecchhhhhHHHHHHhhh
Q 026475 116 TWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIAS 162 (238)
Q Consensus 116 ty~~l~~lv~tai~Ql~~LNkAL~~fda~~VvPv~~v~ft~~~ii~g 162 (238)
.|..++.+.+....=-...|+|+++.|++.+.|..|.-=....+++.
T Consensus 207 ~~~~l~~~g~~t~i~~~l~~~a~~~~~a~~~s~~~yl~Pv~~~~~~~ 253 (256)
T TIGR00688 207 IWLLLVLAGLITGTPLLAFVIAANRLPLNLLGLLQYIGPTIMMLCVS 253 (256)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHH
Confidence 34433333333444556779999999999999998875555544443
No 24
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=89.38 E-value=0.079 Score=47.52 Aligned_cols=62 Identities=13% Similarity=0.153 Sum_probs=42.0
Q ss_pred HHhhccccceeecchhhhhHHHHHHhhhhhhhcccCCCChhhHHHHHHHHHHHhheeeeeccccCCCCC
Q 026475 135 NKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHATREHEQT 203 (238)
Q Consensus 135 NkAL~~fda~~VvPv~~v~ft~~~ii~g~I~f~e~~~~~~~~~~~f~~G~~ii~~GV~lLs~~~~~~~~ 203 (238)
++++++-+++...-. ..+=...+++-|.++++| .+++.++ .|..+++.|+++-+..|.++..
T Consensus 239 ~~~l~~~sa~t~sv~-~~l~pv~~~~~~~~~lge--~lt~~~~----~G~~lil~Gv~l~~~~k~~~~~ 300 (302)
T TIGR00817 239 FMLLGRVSPLTHSVG-NCMKRVVVIVVSILFFGT--KISPQQV----FGTGIAIAGVFLYSRVKAQKPK 300 (302)
T ss_pred HHHHccCCchHHHHH-hhhhhhheeeeehhhcCC--CCchhHH----HHHHHHHHHHHHHHHHhccCcC
Confidence 468888887765544 334445566678899998 3566554 5677889999988876654433
No 25
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=89.15 E-value=3.5 Score=37.37 Aligned_cols=91 Identities=10% Similarity=0.240 Sum_probs=64.2
Q ss_pred CCcc-hhHHHHH-HHHHHHHHHHHHHHHHHhhccccceeecchhhhhHHHHHHhhhhhhhcccCCCChhhHHHHHHHHHH
Q 026475 109 SQIA-YPQTWFF-LTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFIT 186 (238)
Q Consensus 109 ~qf~-~~~ty~~-l~~lv~tai~Ql~~LNkAL~~fda~~VvPv~~v~ft~~~ii~g~I~f~e~~~~~~~~~~~f~~G~~i 186 (238)
+++. ++..|+. ++.=+.-++.|+.-. ++.+.-.-+.-.|+--.+=-..+.+-|.++|+||++ ..+.+.=..++++
T Consensus 36 p~~~~~~~~~~~~~lsG~~W~iGq~~qf-~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW~~--~~~~~~G~~Al~l 112 (269)
T PF06800_consen 36 PAFSMSGTSFIVAFLSGAFWAIGQIGQF-KSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEWTT--TTQKIIGFLALVL 112 (269)
T ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhcceeeeccchhHHHHHHHHHHHhhcCCCCC--cchHHHHHHHHHH
Confidence 4554 2344433 333344555666543 577888889999998877777888999999999995 4555666668999
Q ss_pred HhheeeeeccccCCCC
Q 026475 187 VLSGTIILHATREHEQ 202 (238)
Q Consensus 187 i~~GV~lLs~~~~~~~ 202 (238)
++.|+++-+.+++++.
T Consensus 113 iiiGv~lts~~~~~~~ 128 (269)
T PF06800_consen 113 IIIGVILTSYQDKKSD 128 (269)
T ss_pred HHHHHHHhcccccccc
Confidence 9999998765555544
No 26
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=87.89 E-value=2 Score=39.01 Aligned_cols=160 Identities=13% Similarity=0.188 Sum_probs=93.1
Q ss_pred cceeeeEeeeeceeEEEEecCCCCCCCCHHHHHHHhcChhhHHHHHHHHHHHHHHhhhhccccCccceeEEEEEeccccc
Q 026475 9 MGILGCITCIVGSVVIVIHAPQEHTPNSVQEIWALATQPDFLIYVAATVSVVLALVLHFEPRCGQTNILVYLGICSLMGS 88 (238)
Q Consensus 9 ~~~vG~~lii~G~~liV~~a~~~~~~~t~~eL~~~~~~~~Fl~Y~~~~~~~~~~Li~~~~p~~g~~~~~vy~~i~~l~gs 88 (238)
.+.++.+++++|+.+.....+++++..+..+..+- +..++.-.+.+..|..-||+.+ +.+
T Consensus 105 ~G~~Al~liiiGv~lts~~~~~~~~~~~~~~~~kg--------i~~Ll~stigy~~Y~~~~~~~~------------~~~ 164 (269)
T PF06800_consen 105 IGFLALVLIIIGVILTSYQDKKSDKSSSKSNMKKG--------ILALLISTIGYWIYSVIPKAFH------------VSG 164 (269)
T ss_pred HHHHHHHHHHHHHHHhccccccccccccccchhhH--------HHHHHHHHHHHHHHHHHHHhcC------------CCh
Confidence 34668889999998887777666654333332221 1112222333444455577633 456
Q ss_pred cchhhhHHHHHHHHHHhc---CCCCcchhHHHHH-HHHHHHHHHHHHHHHHHhhccccceeecchhhhhHHHHHHhhhhh
Q 026475 89 LTVVSIKAIGIAIKLTLD---GISQIAYPQTWFF-LTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAI 164 (238)
Q Consensus 89 ~tvl~aK~l~~~l~~t~~---g~~qf~~~~ty~~-l~~lv~tai~Ql~~LNkAL~~fda~~VvPv~~v~ft~~~ii~g~I 164 (238)
.+.+.-.+++.++....- .++++.+..+|.= +..++-...-=.+++. -+.---+.=.|+-|.. ...+.++|..
T Consensus 165 ~~~~lPqaiGm~i~a~i~~~~~~~~~~~k~~~~nil~G~~w~ignl~~~is--~~~~G~a~af~lSQ~~-vvIStlgGI~ 241 (269)
T PF06800_consen 165 WSAFLPQAIGMLIGAFIFNLFSKKPFFEKKSWKNILTGLIWGIGNLFYLIS--AQKNGVATAFTLSQLG-VVISTLGGIF 241 (269)
T ss_pred hHhHHHHHHHHHHHHHHHhhcccccccccchHHhhHHHHHHHHHHHHHHHh--HHhccchhhhhHHhHH-HHHHHhhhhe
Confidence 677778887765554321 1445555555532 2222111111112221 1233444556666766 5667788999
Q ss_pred hhcccCCCChhhHHHHHHHHHHHhheeee
Q 026475 165 MFKDWSGQDVSGIASEICGFITVLSGTII 193 (238)
Q Consensus 165 ~f~e~~~~~~~~~~~f~~G~~ii~~GV~l 193 (238)
++||.+ +..++.....|+++++.|..+
T Consensus 242 il~E~K--t~ke~~~~~~G~~Liv~G~il 268 (269)
T PF06800_consen 242 ILKEKK--TKKEMIYTLIGLILIVIGAIL 268 (269)
T ss_pred EEEecC--chhhHHHHHHHHHHHHHhhhc
Confidence 999987 688899999999999988765
No 27
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=86.68 E-value=0.36 Score=44.05 Aligned_cols=32 Identities=31% Similarity=0.570 Sum_probs=27.5
Q ss_pred CCCccccccceeeeEeeeeceeEEE----EecCCCC
Q 026475 1 MLKERLQKMGILGCITCIVGSVVIV----IHAPQEH 32 (238)
Q Consensus 1 ~L~E~l~~~~~vG~~lii~G~~liV----~~a~~~~ 32 (238)
+||||+++.+.+|+.+.+.|.++|+ +||..++
T Consensus 144 ~LkE~~t~~eaL~s~itl~GVVLIvRPpFlFG~~t~ 179 (346)
T KOG4510|consen 144 FLKEPFTKFEALGSLITLLGVVLIVRPPFLFGDTTE 179 (346)
T ss_pred HHcCCCcHHHHHHHHHhhheEEEEecCCcccCCCcc
Confidence 5899999999999999999999997 5665433
No 28
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=84.30 E-value=5.8 Score=35.69 Aligned_cols=73 Identities=14% Similarity=0.240 Sum_probs=54.7
Q ss_pred HHHHHHHHHHHhhccccceeecchhhhhHHHHHHhhhhhhhcccCCCChhhHHHHHHHHHHHhheeeeeccccCCC
Q 026475 126 CVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHATREHE 201 (238)
Q Consensus 126 tai~Ql~~LNkAL~~fda~~VvPv~~v~ft~~~ii~g~I~f~e~~~~~~~~~~~f~~G~~ii~~GV~lLs~~~~~~ 201 (238)
-++.|+-| -.|.|.=..+.-.|++++.=-+.+.+-|.++|+|+. +..+......|+++++.|+++++..++++
T Consensus 69 w~ig~~~~-~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~--t~~~~~~~~~g~~l~l~G~~l~~~~~~~~ 141 (290)
T TIGR00776 69 WALGQINQ-FKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWS--TSIQTLLGLLALILIIIGVYLTSRSKDKS 141 (290)
T ss_pred HHhhhhhH-HHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhcc--chHHHHHHHHHHHHHHHhHheEEeccccc
Confidence 33444444 346667777777888885555577788999999987 56677788999999999999998776443
No 29
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=81.36 E-value=3.7 Score=31.46 Aligned_cols=65 Identities=17% Similarity=0.214 Sum_probs=47.5
Q ss_pred HHHHHHHHhhccccceeecchhhhhHHHHHHhhhhhhhcccCCCChhhHHHHHHHHHHHhheeeeeccccCCC
Q 026475 129 TQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHATREHE 201 (238)
Q Consensus 129 ~Ql~~LNkAL~~fda~~VvPv~~v~ft~~~ii~g~I~f~e~~~~~~~~~~~f~~G~~ii~~GV~lLs~~~~~~ 201 (238)
......+.|+++-+ ..+.|+.+ .....+.+-|.++|+| +.++.++ .|..+++.||.++..++...
T Consensus 47 ~~~~~~~~a~~~~~-~~v~~i~~-~~pi~~~ll~~~~~~e--r~~~~~~----~a~~l~~~Gv~li~~~~~~~ 111 (113)
T PF13536_consen 47 VAYLLFFYALSYAP-ALVAAIFS-LSPIFTALLSWLFFKE--RLSPRRW----LAILLILIGVILIAWSDLTG 111 (113)
T ss_pred HHHHHHHHHHHhCc-HHHHHHHH-HHHHHHHHHHHHHhcC--CCCHHHH----HHHHHHHHHHHHHhhhhccc
Confidence 44666678888888 46665555 5788888889999997 6666654 46678888999888665443
No 30
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=79.96 E-value=1.2 Score=40.09 Aligned_cols=77 Identities=16% Similarity=0.247 Sum_probs=58.7
Q ss_pred HHHHHHHHHHhhccccceeecchhhhhHHHHHHhhhhhhhcccCCCChhhHHHHHHHHHHHhheeeeeccccCCCCCCCC
Q 026475 127 VVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHATREHEQTTAP 206 (238)
Q Consensus 127 ai~Ql~~LNkAL~~fda~~VvPv~~v~ft~~~ii~g~I~f~e~~~~~~~~~~~f~~G~~ii~~GV~lLs~~~~~~~~~~~ 206 (238)
.+.|++-+ ||.+.-..+.=.|+--.+==..+-+-|.+.||||. ++.|.+.=.....+++.|+++=+.+++.+..+++
T Consensus 70 s~GQ~~Qf-ka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~--t~~~~IlG~iAliliviG~~lTs~~~~~nk~~~~ 146 (288)
T COG4975 70 SFGQANQF-KAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWT--TPTQIILGFIALILIVIGIYLTSKQDRNNKEEEN 146 (288)
T ss_pred hhhhhhhh-hheeeeeeeccccccchhhHhhceeeeEEEEeccC--cchhHHHHHHHHHHHHHhheEeeeeccccccccC
Confidence 45677666 57888888888999887777788888999999998 4667776677788999999997665554433333
No 31
>KOG2766 consensus Predicted membrane protein [Function unknown]
Probab=79.90 E-value=7.6 Score=35.47 Aligned_cols=29 Identities=41% Similarity=0.709 Sum_probs=24.1
Q ss_pred CCCccccccceeeeEeeeeceeEEEEecC
Q 026475 1 MLKERLQKMGILGCITCIVGSVVIVIHAP 29 (238)
Q Consensus 1 ~L~E~l~~~~~vG~~lii~G~~liV~~a~ 29 (238)
|||-|-+...+.|.+.|++|.+++|....
T Consensus 125 fLktrYrlmki~gV~iCi~GvvmvV~sDV 153 (336)
T KOG2766|consen 125 FLKTRYRLMKISGVVICIVGVVMVVFSDV 153 (336)
T ss_pred HHHHHHhhheeeeEEeEecceEEEEEeee
Confidence 46778888899999999999998886543
No 32
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=79.88 E-value=4.5 Score=30.09 Aligned_cols=61 Identities=20% Similarity=0.290 Sum_probs=45.0
Q ss_pred HHHHHHHHHHhhccccceeecchhhhhHHHHHHhhhhhhhcccCCCChhhHHHHHHHHHHHhheeeee
Q 026475 127 VVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIIL 194 (238)
Q Consensus 127 ai~Ql~~LNkAL~~fda~~VvPv~~v~ft~~~ii~g~I~f~e~~~~~~~~~~~f~~G~~ii~~GV~lL 194 (238)
...-....++|+++-+++.+.++.+ .....+.+-+.++++|- .++.++ .|+.+++.|++++
T Consensus 64 ~~~~~~~~~~a~~~~~~~~~~~~~~-~~pv~~~i~~~~~~~e~--~~~~~~----~g~~l~~~g~~l~ 124 (126)
T PF00892_consen 64 TALAYLLYFYALKYISASIVSILQY-LSPVFAAILGWLFLGER--PSWRQI----IGIILIIIGVVLI 124 (126)
T ss_pred eehHHHHHHHHHHhcchhHHHHHHH-HHHHHHHHHHHHHcCCC--CCHHHH----HHHHHHHHHHHHH
Confidence 3445667789999999999999998 67778888888999984 345444 4556666666554
No 33
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=77.07 E-value=14 Score=32.91 Aligned_cols=82 Identities=10% Similarity=0.035 Sum_probs=53.3
Q ss_pred chhHHHHH-HHHHHHHHHHHHHHHHHhhccccceeecchhhhhHHHHHHhhhhhhhcccCCCChhhHHHHHHHHHHHhhe
Q 026475 112 AYPQTWFF-LTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSG 190 (238)
Q Consensus 112 ~~~~ty~~-l~~lv~tai~Ql~~LNkAL~~fda~~VvPv~~v~ft~~~ii~g~I~f~e~~~~~~~~~~~f~~G~~ii~~G 190 (238)
.++..|.. +...+++.+.+....|+++++-+++.+.+..+.- -..+.+-|.++++|- .++.++ .|..+++.|
T Consensus 203 ~~~~~~~~~l~lgv~~t~~~~~l~~~~~~~~~a~~as~~~~l~-Pv~a~l~~~l~lgE~--~~~~~~----iG~~lIl~~ 275 (293)
T PRK10532 203 WHWSILPLGLAVAILSTALPYSLEMIALTRLPTRTFGTLMSME-PALAAVSGMIFLGET--LTLIQW----LALGAIIAA 275 (293)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHhH-HHHHHHHHHHHhCCC--CcHHHH----HHHHHHHHH
Confidence 34555532 3444555566666779999999999888877654 555666677778874 455544 456666677
Q ss_pred eeeeccccCC
Q 026475 191 TIILHATREH 200 (238)
Q Consensus 191 V~lLs~~~~~ 200 (238)
+++.+..+++
T Consensus 276 ~~~~~~~~~~ 285 (293)
T PRK10532 276 SMGSTLTIRR 285 (293)
T ss_pred HHHHHhcCCC
Confidence 7666555433
No 34
>PRK13499 rhamnose-proton symporter; Provisional
Probab=76.65 E-value=0.4 Score=44.88 Aligned_cols=83 Identities=10% Similarity=0.131 Sum_probs=50.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhccc-cc--eeecchhhhhHHHHHHhhhhhhhcccCCCChhhHHHHHHHHHHHhhe
Q 026475 114 PQTWFFLTVAAVCVVTQLNYLNKALDTF-NA--AIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSG 190 (238)
Q Consensus 114 ~~ty~~l~~lv~tai~Ql~~LNkAL~~f-da--~~VvPv~~v~ft~~~ii~g~I~f~e~~~~~~~~~~~f~~G~~ii~~G 190 (238)
+..+++.++.-+.=..|..+.=.|-+.- ++ ..-.++.+-.-.+.+.+.|. +.|||++.+..+......|+++++.|
T Consensus 257 ~~n~l~~~l~G~~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~ViistlwGi-~lkE~K~a~~k~~~~l~~G~vliI~g 335 (345)
T PRK13499 257 ITNVLLSALAGVMWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNLWGL-VLKEWKGASRRPVRVLSLGCVVIILA 335 (345)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHHhhh-hhhhccCCCccchhHHHHHHHHHHHH
Confidence 3445544444444445544443333322 11 11122333333355666677 59999999999999999999999999
Q ss_pred eeeeccc
Q 026475 191 TIILHAT 197 (238)
Q Consensus 191 V~lLs~~ 197 (238)
..++...
T Consensus 336 ~~lig~~ 342 (345)
T PRK13499 336 ANIVGLG 342 (345)
T ss_pred HHHHhhc
Confidence 9887643
No 35
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=76.38 E-value=5.9 Score=31.06 Aligned_cols=78 Identities=15% Similarity=0.158 Sum_probs=51.6
Q ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHHhhccccceeecchhhhhHHHHHHhhhhhhhcccCCCChhhHHHHHHHHHHHhh
Q 026475 110 QIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLS 189 (238)
Q Consensus 110 qf~~~~ty~~l~~lv~tai~Ql~~LNkAL~~fda~~VvPv~~v~ft~~~ii~g~I~f~e~~~~~~~~~~~f~~G~~ii~~ 189 (238)
.|+++.+++ +++++...-..+|-+|+|.-|-..-+++--..=+....+.|.++|+|= .++.+ ..|+.+++.
T Consensus 26 gf~~~~~~i---l~~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~--l~~~~----~~gl~Liia 96 (106)
T COG2076 26 GFTRLWPSI---LTIVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGES--LSLIK----LLGLALILA 96 (106)
T ss_pred cccccchHH---HHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCc--CCHHH----HHHHHHHHH
Confidence 366666655 344566667889999999977665544444444445556699999983 34544 356778888
Q ss_pred eeeeecc
Q 026475 190 GTIILHA 196 (238)
Q Consensus 190 GV~lLs~ 196 (238)
||..|..
T Consensus 97 Gvi~Lk~ 103 (106)
T COG2076 97 GVIGLKL 103 (106)
T ss_pred HHHHhhh
Confidence 8887754
No 36
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=63.66 E-value=12 Score=29.52 Aligned_cols=53 Identities=11% Similarity=0.181 Sum_probs=43.4
Q ss_pred HhhccccceeecchhhhhHHHHHHhhhhhhhcccCCCChhhHHHHHHHHHHHhheeeee
Q 026475 136 KALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIIL 194 (238)
Q Consensus 136 kAL~~fda~~VvPv~~v~ft~~~ii~g~I~f~e~~~~~~~~~~~f~~G~~ii~~GV~lL 194 (238)
-.|...|=+..+|+....-=.++.++|.++.+|... + --..|+..++.||.+.
T Consensus 60 ~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~--~----~~~~G~~Li~~Gv~Lc 112 (113)
T PF10639_consen 60 LLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVIS--R----RTWLGMALILAGVALC 112 (113)
T ss_pred HHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccc--h----hHHHHHHHHHcCeeee
Confidence 468899999999999888888888999999998643 2 2367888999999874
No 37
>PF08507 COPI_assoc: COPI associated protein; InterPro: IPR013714 Proteins in this family co-localise with COPI vesicle coat proteins []. In yeast it is a Golgi membrane protein involved in vesicular trafficking, interacting with TVP18 [].
Probab=59.84 E-value=27 Score=27.90 Aligned_cols=20 Identities=35% Similarity=0.489 Sum_probs=11.4
Q ss_pred hHHHHHHHHHHHhheeeeec
Q 026475 176 GIASEICGFITVLSGTIILH 195 (238)
Q Consensus 176 ~~~~f~~G~~ii~~GV~lLs 195 (238)
.+...+.|....+.|+..+.
T Consensus 85 ~~~~~i~g~~~~~~G~~~i~ 104 (136)
T PF08507_consen 85 SILSIIIGLLLFLVGVIYII 104 (136)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 44555566666666665443
No 38
>PRK13499 rhamnose-proton symporter; Provisional
Probab=59.68 E-value=21 Score=33.59 Aligned_cols=71 Identities=10% Similarity=0.130 Sum_probs=55.0
Q ss_pred HHHHHHHHHHHHhhccccceeecchhhhhHHHHHHhhhhhhhcccC-CCChhhHHHHHHHHHHHhheeeeecc
Q 026475 125 VCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWS-GQDVSGIASEICGFITVLSGTIILHA 196 (238)
Q Consensus 125 ~tai~Ql~~LNkAL~~fda~~VvPv~~v~ft~~~ii~g~I~f~e~~-~~~~~~~~~f~~G~~ii~~GV~lLs~ 196 (238)
.-++.|+.+. ++.|.---+.=.|+--..=...+.+-+.++++||+ .++..+......|+++++.|+.+-+.
T Consensus 82 ~W~iG~i~~~-~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~ 153 (345)
T PRK13499 82 LWGIGGITYG-LTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGR 153 (345)
T ss_pred HHHhhhhhHH-HHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHH
Confidence 3445555543 56777777778888888878888888999999998 33455666689999999999999886
No 39
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=57.20 E-value=5.2 Score=38.10 Aligned_cols=53 Identities=15% Similarity=0.334 Sum_probs=36.2
Q ss_pred CCCccccccceeeeEeeeeceeEEEEecCCCCCC-----CCHHHHHHHhcChhhHHHH
Q 026475 1 MLKERLQKMGILGCITCIVGSVVIVIHAPQEHTP-----NSVQEIWALATQPDFLIYV 53 (238)
Q Consensus 1 ~L~E~l~~~~~vG~~lii~G~~liV~~a~~~~~~-----~t~~eL~~~~~~~~Fl~Y~ 53 (238)
|.+|+++....++.++++.|.+++.....++... ..+-++.+++..-.+-+|.
T Consensus 206 f~~e~ft~sKllav~~si~GViiVt~~~s~~~~~~~a~~~llG~llaL~sA~~YavY~ 263 (416)
T KOG2765|consen 206 FPVERFTLSKLLAVFVSIAGVIIVTMGDSKQNSDLPASRPLLGNLLALLSALLYAVYT 263 (416)
T ss_pred cCcchhhHHHHHHHHHhhccEEEEEeccccccccCCccchhHHHHHHHHHHHHHHHHH
Confidence 4579999999999999998888777765544322 3455666666554444443
No 40
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=55.09 E-value=4.4 Score=37.55 Aligned_cols=63 Identities=17% Similarity=0.254 Sum_probs=38.5
Q ss_pred HHHHHHHHH----hhccccceeecchhhhhHHHHHHhhhhhhhcccCCCChhhHHHHHHHHHHHhheeeeeccc
Q 026475 128 VTQLNYLNK----ALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHAT 197 (238)
Q Consensus 128 i~Ql~~LNk----AL~~fda~~VvPv~~v~ft~~~ii~g~I~f~e~~~~~~~~~~~f~~G~~ii~~GV~lLs~~ 197 (238)
..--...|+ ++++-++..- -+...+=.+.+++.|.++++| .+++.|+ +|..+++.|+++.+..
T Consensus 283 ~l~~~l~n~~~f~~l~~~s~~t~-sv~~~lk~V~~iv~s~l~~ge--~lt~~~~----iG~~lii~Gv~lYs~~ 349 (350)
T PTZ00343 283 GVWYYLYNEVAFYCLGKVNQVTH-AVANTLKRVVIIVSSIIIFQT--QVTLLGY----LGMAVAILGALLYSLF 349 (350)
T ss_pred HHHHHHHHHHHHHHHhccchhHH-HHHHHHHHHHHhhhhHHHhCC--CCchHhH----HHHHHHHHHHHHHhhc
Confidence 333444464 7776554432 223334456778889999996 4566554 5777888888876643
No 41
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=50.11 E-value=46 Score=28.37 Aligned_cols=75 Identities=13% Similarity=0.156 Sum_probs=52.5
Q ss_pred HHHHHHHHHHHHHHHhhccccceeecchhhhhHHHHHHhhhhhhhcccCCCChhhHHHHHHHHHHHhheeeeeccccCCC
Q 026475 122 VAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHATREHE 201 (238)
Q Consensus 122 ~lv~tai~Ql~~LNkAL~~fda~~VvPv~~v~ft~~~ii~g~I~f~e~~~~~~~~~~~f~~G~~ii~~GV~lLs~~~~~~ 201 (238)
.-...........+.|+++-+++...++++..=....+++..++++| +.+..++.+ ..+.+.|+.++......+
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e--~~~~~~~~~----~~~~~~Gv~lv~~~~~~~ 148 (292)
T COG0697 75 LALLGLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGE--RLSLLQILG----ILLALAGVLLILLGGGGG 148 (292)
T ss_pred HHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccC--CCcHHHHHH----HHHHHHhHHheecCCCcc
Confidence 33334444445556678999999999999888888888887677787 345555544 677789999998766654
Q ss_pred C
Q 026475 202 Q 202 (238)
Q Consensus 202 ~ 202 (238)
.
T Consensus 149 ~ 149 (292)
T COG0697 149 G 149 (292)
T ss_pred h
Confidence 3
No 42
>PF11970 Git3_C: G protein-coupled glucose receptor regulating Gpa2 C-term; InterPro: IPR022596 This entry contains a functionally uncharacterised region belonging to the Git3 G-protein coupled receptor. Git3 is one of six proteins required for glucose-triggered adenylate cyclase activation, and is a G protein-coupled receptor responsible for the activation of adenylate cyclase through Gpa2 - heterotrimeric G protein alpha subunit, part of the glucose-detection pathway. Git3 contains seven predicted transmembrane domains, a third cytoplasmic loop and a cytoplasmic tail []. This family is the conserved C-terminal domain of the member proteins.
Probab=46.56 E-value=28 Score=25.48 Aligned_cols=49 Identities=18% Similarity=0.249 Sum_probs=40.4
Q ss_pred ceeecchhhhhHHHHHHhhhhhhhcccCCCChhhHHHHHHHHHHHhhee
Q 026475 143 AAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGT 191 (238)
Q Consensus 143 a~~VvPv~~v~ft~~~ii~g~I~f~e~~~~~~~~~~~f~~G~~ii~~GV 191 (238)
...++|+.|++-.++=++.+..-|.+-.+-++..++..+.|+...+.|.
T Consensus 13 ~mfiYP~~Yi~lwlfP~~~~~~~~~~~~~~~p~~~l~~i~~~~~~~~G~ 61 (76)
T PF11970_consen 13 SMFIYPLVYIVLWLFPFAAHRMQYMYEIGHGPSFWLFCIAGFMQPSQGF 61 (76)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCchHHHHHHHHHHHccCH
Confidence 4568899999999988888888888666777878888888888888874
No 43
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=40.58 E-value=1.8 Score=34.57 Aligned_cols=31 Identities=29% Similarity=0.386 Sum_probs=25.6
Q ss_pred CCCccccccceeeeEeeeeceeEEEEecCCC
Q 026475 1 MLKERLQKMGILGCITCIVGSVVIVIHAPQE 31 (238)
Q Consensus 1 ~L~E~l~~~~~vG~~lii~G~~liV~~a~~~ 31 (238)
+.||+++....+|.++++.|.+++=..+++.
T Consensus 78 ~f~E~~s~~~~~gi~lIi~GVi~l~l~~~~~ 108 (120)
T PRK10452 78 LFDESLSLMKIAGLTTLVAGIVLIKSGTRKA 108 (120)
T ss_pred HhCCCCCHHHHHHHHHHHHHHHHhhcCCCCC
Confidence 4799999999999999999998775555433
No 44
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=40.36 E-value=74 Score=29.80 Aligned_cols=108 Identities=20% Similarity=0.223 Sum_probs=72.6
Q ss_pred cccccchhhhHHHHHHHHHHh-cCCC---CcchhHHHHHHHHHHHHHHHHHHHHHH-hhccccceeecchhhhhHHHHHH
Q 026475 85 LMGSLTVVSIKAIGIAIKLTL-DGIS---QIAYPQTWFFLTVAAVCVVTQLNYLNK-ALDTFNAAIVSPVYYVMFTTLTI 159 (238)
Q Consensus 85 l~gs~tvl~aK~l~~~l~~t~-~g~~---qf~~~~ty~~l~~lv~tai~Ql~~LNk-AL~~fda~~VvPv~~v~ft~~~i 159 (238)
.+|+...+--|+.-.+-+... .|+. -+++|.-|. .+...++.++ .|= |-..-++++|.|+--.-...+++
T Consensus 32 ~Ig~sfilkKkgl~r~~~~~~ra~~gg~~yl~~~~Ww~---G~ltm~vGei--~NFaAYaFAPasLVtPLGAlsvi~sai 106 (335)
T KOG2922|consen 32 FIGSSFILKKKGLKRAGASGLRAGEGGYGYLKEPLWWA---GMLTMIVGEI--ANFAAYAFAPASLVTPLGALSVIISAI 106 (335)
T ss_pred EEeeehhhhHHHHHHHhhhcccccCCCcchhhhHHHHH---HHHHHHHHhH--hhHHHHhhchHhhhccchhHHHHHHHH
Confidence 467777777778754443222 2333 344544444 4555555543 232 33455789999999999999999
Q ss_pred hhhhhhhcccCCCChhhHHHHHHHHHHHhheeeeeccccCCCCCC
Q 026475 160 IASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHATREHEQTT 204 (238)
Q Consensus 160 i~g~I~f~e~~~~~~~~~~~f~~G~~ii~~GV~lLs~~~~~~~~~ 204 (238)
++..++-+.+. ..=.+||..++.|-.++-.+.+++++.
T Consensus 107 la~~~L~Ekl~-------~~g~lGc~l~v~Gst~iV~haP~e~~i 144 (335)
T KOG2922|consen 107 LASFFLKEKLN-------LLGILGCVLCVVGSTTIVIHAPKEQEI 144 (335)
T ss_pred HHHHHHHHHHH-------HhhhhheeEEecccEEEEEecCccccc
Confidence 99998887664 345689999999999888776666544
No 45
>PF07457 DUF1516: Protein of unknown function (DUF1516); InterPro: IPR010899 This family contains a number of hypothetical bacterial proteins of unknown function approximately 120 residues long.
Probab=40.03 E-value=58 Score=25.52 Aligned_cols=82 Identities=15% Similarity=0.242 Sum_probs=48.4
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHhhccccceeecch---hhhhHHHHHHhhhhhhhc-ccCCCChhhHHHHHHHHHHH
Q 026475 112 AYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPV---YYVMFTTLTIIASAIMFK-DWSGQDVSGIASEICGFITV 187 (238)
Q Consensus 112 ~~~~ty~~l~~lv~tai~Ql~~LNkAL~~fda~~VvPv---~~v~ft~~~ii~g~I~f~-e~~~~~~~~~~~f~~G~~ii 187 (238)
.|-.+|++++++...+.. .+=+ -.+....|. .-.+|- ..+++|..++. ++.+.+....+-+++|+.++
T Consensus 5 ~Hi~sWvl~iIlf~~a~~--~~~~-----g~~k~~k~~~MilRl~Yl-liiisG~~L~~~~~~~~~~l~~iK~l~gl~vI 76 (110)
T PF07457_consen 5 IHITSWVLLIILFIVAYF--LYSK-----GKTKKAKILHMILRLFYL-LIIISGVWLFIRTFAGNPMLYIIKMLLGLIVI 76 (110)
T ss_pred HHHHHHHHHHHHHHHHHH--HHhc-----ccchhHHHHHHHHHHHHH-HHHHHHHHHHHHHHccCCHHHHHHHHHHHHHH
Confidence 467788887776666653 1111 111111221 123344 45555555555 59999999999999999887
Q ss_pred hheeeeeccccCCC
Q 026475 188 LSGTIILHATREHE 201 (238)
Q Consensus 188 ~~GV~lLs~~~~~~ 201 (238)
-.-=..++++++.+
T Consensus 77 ~lmEm~l~rkkk~k 90 (110)
T PF07457_consen 77 GLMEMALARKKKGK 90 (110)
T ss_pred HHHHHHHHHHHcCC
Confidence 66655666555543
No 46
>PF15048 OSTbeta: Organic solute transporter subunit beta protein
Probab=37.82 E-value=13 Score=30.05 Aligned_cols=32 Identities=9% Similarity=0.162 Sum_probs=26.7
Q ss_pred hhcccCCCChhhHHHHHHHHHHHhheeeeeccc
Q 026475 165 MFKDWSGQDVSGIASEICGFITVLSGTIILHAT 197 (238)
Q Consensus 165 ~f~e~~~~~~~~~~~f~~G~~ii~~GV~lLs~~ 197 (238)
||+ -++-++|.+.++.+.++++++|++||.++
T Consensus 26 ~fR-~ED~tpWNysiL~Ls~vvlvi~~~LLgrs 57 (125)
T PF15048_consen 26 FFR-VEDATPWNYSILALSFVVLVISFFLLGRS 57 (125)
T ss_pred hee-cCCCCCcchHHHHHHHHHHHHHHHHHHHH
Confidence 344 34668999999999999999999999754
No 47
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=37.51 E-value=92 Score=28.00 Aligned_cols=50 Identities=16% Similarity=0.138 Sum_probs=31.8
Q ss_pred hhhHHHHHHhhhhh-----hhcccCCCChhhHHHHHHHHHHHhheeeeeccccCCC
Q 026475 151 YVMFTTLTIIASAI-----MFKDWSGQDVSGIASEICGFITVLSGTIILHATREHE 201 (238)
Q Consensus 151 ~v~ft~~~ii~g~I-----~f~e~~~~~~~~~~~f~~G~~ii~~GV~lLs~~~~~~ 201 (238)
+..|...+++.|.. +|..-.+ .+.+-.+-.+|..++++|..+.+.-|+++
T Consensus 85 ~liW~s~n~l~Gw~~grfGlFg~~~~-~~~~~~Ln~~G~~l~~~~~~~f~fik~~~ 139 (254)
T PF07857_consen 85 MLIWGSVNCLTGWASGRFGLFGLDPQ-VPSSPWLNYIGVALVLVSGIIFSFIKSEE 139 (254)
T ss_pred HHHHHHHHHHHHHHHhhceecccccc-ccchhHHHHHHHHHHHHHHHheeeecCCC
Confidence 56788888888766 5554444 44455556667777777766666555554
No 48
>PF14851 FAM176: FAM176 family
Probab=37.10 E-value=67 Score=26.77 Aligned_cols=6 Identities=0% Similarity=-0.224 Sum_probs=2.8
Q ss_pred ceeeec
Q 026475 227 LITIHN 232 (238)
Q Consensus 227 ~~~~~~ 232 (238)
|...|+
T Consensus 86 dss~~~ 91 (153)
T PF14851_consen 86 DSSFPR 91 (153)
T ss_pred cccccc
Confidence 335554
No 49
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=36.83 E-value=1.1e+02 Score=26.16 Aligned_cols=64 Identities=13% Similarity=0.066 Sum_probs=43.1
Q ss_pred HHHHHHHHHHHhhccccceeecchhhhhHHHHHHhhhhhhhcccCCCChhhHHHHHHHHHHHhheeeeeccc
Q 026475 126 CVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHAT 197 (238)
Q Consensus 126 tai~Ql~~LNkAL~~fda~~VvPv~~v~ft~~~ii~g~I~f~e~~~~~~~~~~~f~~G~~ii~~GV~lLs~~ 197 (238)
..+.+ ...+.|+++=+++...++ +...-..+.+-+.++++| +.+..++. |+++.+.|+.++...
T Consensus 57 ~~l~~-~~~~~a~~~~~~~~~~ii-~~~~P~~~~~~~~l~~~e--~~~~~~~~----gi~i~~~Gv~li~~~ 120 (260)
T TIGR00950 57 IGVFY-VLYFVAVKRLPVGEAALL-LYLAPLYVTLLSDLMGKE--RPRKLVLL----AAVLGLAGAVLLLSD 120 (260)
T ss_pred HHHHH-HHHHHHHHhcChhhhHHH-HhhhHHHHHHHHHHHccC--CCcHHHHH----HHHHHHHhHHhhccC
Confidence 33333 456899999888877555 555556666777788886 56676654 667777888777643
No 50
>PF01635 Corona_M: Coronavirus M matrix/glycoprotein; InterPro: IPR002574 This family consists of various Coronavirus matrix proteins which are transmembrane glycoproteins. The M protein or E1 glycoprotein is implicated in virus assembly []. The E1 viral membrane protein is required for formation of the viral envelope and is transported via the Golgi complex [].; GO: 0019058 viral infectious cycle; PDB: 3I6G_F 3I6K_C.
Probab=36.60 E-value=12 Score=33.06 Aligned_cols=23 Identities=13% Similarity=0.081 Sum_probs=0.0
Q ss_pred CCCCHHHHHHHhcChhhHHHHHH
Q 026475 33 TPNSVQEIWALATQPDFLIYVAA 55 (238)
Q Consensus 33 ~~~t~~eL~~~~~~~~Fl~Y~~~ 55 (238)
...+.||..+.++++.|.+-+++
T Consensus 4 ~t~~~~~~~~~~~eWNf~~~iiL 26 (221)
T PF01635_consen 4 CTIPVEEVIEHLKEWNFSWSIIL 26 (221)
T ss_dssp -----------------------
T ss_pred ccccHHHHHHHHHHhhHHHHHHH
Confidence 45688999999999999887744
No 51
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=34.92 E-value=43 Score=29.25 Aligned_cols=19 Identities=0% Similarity=-0.164 Sum_probs=11.8
Q ss_pred eeecchhhhhHHHHHHhhh
Q 026475 144 AIVSPVYYVMFTTLTIIAS 162 (238)
Q Consensus 144 ~~VvPv~~v~ft~~~ii~g 162 (238)
....-+.....+...+++.
T Consensus 118 ~~~~~~~~~~~~~g~~~~~ 136 (379)
T TIGR00881 118 GTWVSFWNCSHNVGGGLLP 136 (379)
T ss_pred eeeEeehhccchhHHHHHH
Confidence 4455566666666666665
No 52
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=34.12 E-value=59 Score=29.70 Aligned_cols=73 Identities=15% Similarity=0.188 Sum_probs=46.9
Q ss_pred HHHHHHHHHHHHHHHHhhccccceeecchhhhhHHHHHHhhhhhhhcccCCCChhhHHHHHHHHHHHhheeeeeccccCC
Q 026475 121 TVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHATREH 200 (238)
Q Consensus 121 ~~lv~tai~Ql~~LNkAL~~fda~~VvPv~~v~ft~~~ii~g~I~f~e~~~~~~~~~~~f~~G~~ii~~GV~lLs~~~~~ 200 (238)
..++..++.++--. -|+..-++++|.|+-=.-....++++...+=+. ++..+ ..|+..++.|+.++-...++
T Consensus 55 ~G~~~~~~g~~~~~-~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~---~~~~~----~~G~~l~i~G~~liv~~~~~ 126 (300)
T PF05653_consen 55 IGLLLMVLGEILNF-VALGFAPASLVAPLGALSLVFNAVLARFFLGEK---LTRRD----IVGCALIILGSVLIVIFAPK 126 (300)
T ss_pred HHHHHHhcchHHHH-HHHHhhhHHHHHHHHhhhhhhHHHHhHHHhccc---chHhH----HhhHHHHHhhheeeEEeCCC
Confidence 34444444443222 488888999999998777777777776666433 34444 46778888888777655544
Q ss_pred C
Q 026475 201 E 201 (238)
Q Consensus 201 ~ 201 (238)
+
T Consensus 127 ~ 127 (300)
T PF05653_consen 127 E 127 (300)
T ss_pred C
Confidence 3
No 53
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=33.66 E-value=1.1e+02 Score=28.86 Aligned_cols=110 Identities=16% Similarity=0.281 Sum_probs=71.4
Q ss_pred cccccchhhhHHHHHHHH-HHhcCCCCc--chh---HHHHHHHHHHHHHHHHHHHHHHhhccccceeecchhhhhHHHHH
Q 026475 85 LMGSLTVVSIKAIGIAIK-LTLDGISQI--AYP---QTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLT 158 (238)
Q Consensus 85 l~gs~tvl~aK~l~~~l~-~t~~g~~qf--~~~---~ty~~l~~lv~tai~Ql~~LNkAL~~fda~~VvPv~~v~ft~~~ 158 (238)
+.|+++.-+.=++-...+ .+.+.++.+ ..| .-|++.++.-+.=..|..+.-.|=.+..+. --.+-++.+..+.
T Consensus 221 ~~GGf~tN~~yc~~~l~~~k~~s~~~d~~~~~~~~~~N~~~~aLaG~lWy~qfffYg~G~s~lg~~-~~~~sW~i~ma~~ 299 (344)
T PF06379_consen 221 LWGGFITNLIYCLILLAKNKNWSWKGDYSVAKPPLLKNYLFCALAGVLWYSQFFFYGMGESKLGAS-GPFSSWAIHMALI 299 (344)
T ss_pred hhhHHHHHHHHHHHHHhhcCCCccccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCc-cccHHHHHHHHHH
Confidence 467777777666654443 233322222 222 347777777778888999998887666644 1122344444444
Q ss_pred Hhh---hhhhhcccCCCChhhHHHHHHHHHHHhheeeeec
Q 026475 159 IIA---SAIMFKDWSGQDVSGIASEICGFITVLSGTIILH 195 (238)
Q Consensus 159 ii~---g~I~f~e~~~~~~~~~~~f~~G~~ii~~GV~lLs 195 (238)
++- -.+..+||++.+....-...+|+.+++..+.++.
T Consensus 300 vl~snvwGl~lkEWKg~s~kt~~vl~~G~~vlI~s~~ivG 339 (344)
T PF06379_consen 300 VLFSNVWGLILKEWKGASKKTIRVLVLGIAVLILSVVIVG 339 (344)
T ss_pred HHHHHHHHHHHHHhccCCcccHHHHHHHHHHHHHHHHHHh
Confidence 443 2567899999998888899999999988876653
No 54
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=31.53 E-value=2.1e+02 Score=25.38 Aligned_cols=68 Identities=19% Similarity=0.209 Sum_probs=46.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhccccceeecchhhhhHHHHHHhhhhhhhcccCCCChhhHHHHHHHH
Q 026475 114 PQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGF 184 (238)
Q Consensus 114 ~~ty~~l~~lv~tai~Ql~~LNkAL~~fda~~VvPv~~v~ft~~~ii~g~I~f~e~~~~~~~~~~~f~~G~ 184 (238)
+..+...+.-......+....+.|+++-+++...-++| ..-+.+.+-+.++++| +.+..++++..+|+
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~a~~l~~-~~Pi~v~l~~~~~l~E--~~~~~~~~g~~l~~ 137 (296)
T PRK15430 70 PQKIFMLAVSAVLIGGNWLLFIWAVNNHHMLEASLGYF-INPLVNIVLGMIFLGE--RFRRMQWLAVILAI 137 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHH-HHHHHHHHHHHHHhcC--CCcHHHHHHHHHHH
Confidence 44443333334445567888899999988888877766 4466677778888886 67888777666554
No 55
>PF06679 DUF1180: Protein of unknown function (DUF1180); InterPro: IPR009565 This entry consists of several hypothetical eukaryotic proteins thought to be membrane proteins. Their function is unknown.
Probab=30.46 E-value=31 Score=29.03 Aligned_cols=21 Identities=5% Similarity=0.066 Sum_probs=10.1
Q ss_pred hHHHHHHHHHHHhheeeeecc
Q 026475 176 GIASEICGFITVLSGTIILHA 196 (238)
Q Consensus 176 ~~~~f~~G~~ii~~GV~lLs~ 196 (238)
..+-+++|+..+++.-+++-.
T Consensus 96 R~~~Vl~g~s~l~i~yfvir~ 116 (163)
T PF06679_consen 96 RALYVLVGLSALAILYFVIRT 116 (163)
T ss_pred hhHHHHHHHHHHHHHHHHHHH
Confidence 344445555555554444443
No 56
>PF04018 DUF368: Domain of unknown function (DUF368); InterPro: IPR007163 This is a predicted transmembrane family of unknown function. Proteins usually have between 6 and 9 predicted transmembrane segments.
Probab=26.53 E-value=2.6e+02 Score=25.19 Aligned_cols=69 Identities=14% Similarity=0.151 Sum_probs=49.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccccceeecchhhhhHHHHHHhhhhhhhcccCCCChhhHHHHHHHHHHHhhee
Q 026475 118 FFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGT 191 (238)
Q Consensus 118 ~~l~~lv~tai~Ql~~LNkAL~~fda~~VvPv~~v~ft~~~ii~g~I~f~e~~~~~~~~~~~f~~G~~ii~~GV 191 (238)
.+.+.+++..+.=-+-++-.++.|+ .|++. +|.-.-+-+--..||+-++.++.+++.+..|+++.+.=.
T Consensus 59 ~l~~G~~~gi~~~s~~i~~ll~~yp----~~t~~-fF~GLIlgSip~l~k~~~~~~~~~~~~~~~g~~i~~~~~ 127 (257)
T PF04018_consen 59 PLGIGILIGILLFSKVISYLLENYP----IPTYS-FFFGLILGSIPFLYKEIKKFSPKSIIFFLLGAIIALLLS 127 (257)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCH----HHHHH-HHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHH
Confidence 4566666677777777788888887 44444 444444455567899999999999999999987766533
No 57
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=25.37 E-value=2.3e+02 Score=27.85 Aligned_cols=60 Identities=13% Similarity=0.003 Sum_probs=39.9
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHhhccccceeecchhhhhHHHHHHhhhhhhhcccC
Q 026475 111 IAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWS 170 (238)
Q Consensus 111 f~~~~ty~~l~~lv~tai~Ql~~LNkAL~~fda~~VvPv~~v~ft~~~ii~g~I~f~e~~ 170 (238)
......+.....+..+++.=.-+.|..++-+--....-..+...+.++-..+...|+..+
T Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~w~s~~~~g~~k~~~~~~~~i~~~~s~~~~~~~~~~~~~ 428 (495)
T KOG2533|consen 369 GAYGAFLIGPYGLIATAIIALSWTSANLAGNTKALTTVSAIIDGTGSAGAISGQLFRSLD 428 (495)
T ss_pred HHhHHHHhcchhhHHHHHHHHhhccccccchHHhHHHHhhhhcchhHHHHhhhhhccccc
Confidence 334444555556677777777888888877776666666666666666666666666644
No 58
>PRK13673 hypothetical protein; Provisional
Probab=24.07 E-value=1.8e+02 Score=23.21 Aligned_cols=83 Identities=11% Similarity=0.115 Sum_probs=49.4
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHhhccccceeecchhhhhHHHHHHhhhhhhhccc-CCCChhhHHHHHHHHHHHhhe
Q 026475 112 AYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDW-SGQDVSGIASEICGFITVLSG 190 (238)
Q Consensus 112 ~~~~ty~~l~~lv~tai~Ql~~LNkAL~~fda~~VvPv~~v~ft~~~ii~g~I~f~e~-~~~~~~~~~~f~~G~~ii~~G 190 (238)
.|-.+|++.+++...+..-.. |+ =+.+ . ++-+-.=.|=+..+++|..++.+. .+.+.+..+=..+|+.++-.-
T Consensus 4 ~Hi~sWvi~iILf~vay~l~s--~~-~~~~--k-i~hMilRLfyil~iiTG~~l~~~~~~~~~~l~~~K~l~gi~vIg~m 77 (118)
T PRK13673 4 LHITSWVLAIILFFVAYSLYS--GG-SKKA--K-ILHMILRLFYILIIITGFWLLIRSFGSNHMLYILKMLLGIIVIGLM 77 (118)
T ss_pred HHHHHHHHHHHHHHHHHHHHh--cC-Cccc--h-HHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHH
Confidence 366788877766655532111 11 1222 1 233333344556777776666665 777788888889998877666
Q ss_pred eeeeccccCC
Q 026475 191 TIILHATREH 200 (238)
Q Consensus 191 V~lLs~~~~~ 200 (238)
=..++++|+.
T Consensus 78 Em~l~r~kk~ 87 (118)
T PRK13673 78 EMSLAKRKKG 87 (118)
T ss_pred HHHHHHHHcC
Confidence 6666655554
No 59
>PF14018 DUF4234: Domain of unknown function (DUF4234)
Probab=23.57 E-value=2e+02 Score=20.17 Aligned_cols=25 Identities=24% Similarity=0.359 Sum_probs=16.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcccc
Q 026475 118 FFLTVAAVCVVTQLNYLNKALDTFN 142 (238)
Q Consensus 118 ~~l~~lv~tai~Ql~~LNkAL~~fd 142 (238)
.+++.++.+.+-++++++|-.+.+|
T Consensus 6 ~ilLsiiT~GIY~l~W~y~~~~~~~ 30 (75)
T PF14018_consen 6 VILLSIITCGIYGLYWLYKIWKELN 30 (75)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3446677888888888777665543
No 60
>PF04276 DUF443: Protein of unknown function (DUF443) ; InterPro: IPR005915 The members of this family share 50 % or greater sequence identity. They are found as eleven tandem genes, arranged head-to-tail, in Staphylococcus aureus (strain COL). Distant full-length homologs are found in a Staphylococcus haemolyticus plasmid and in Bacillus halodurans. The function of these proteins is unknown.
Probab=23.54 E-value=4.6e+02 Score=22.31 Aligned_cols=57 Identities=23% Similarity=0.337 Sum_probs=39.8
Q ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHHhhc--ccc-------ceeecc----------hhhhhHHHHHHhhhhhhh
Q 026475 110 QIAYPQTWFFLTVAAVCVVTQLNYLNKALD--TFN-------AAIVSP----------VYYVMFTTLTIIASAIMF 166 (238)
Q Consensus 110 qf~~~~ty~~l~~lv~tai~Ql~~LNkAL~--~fd-------a~~VvP----------v~~v~ft~~~ii~g~I~f 166 (238)
|+....-++++++.....+.=-.|+||-++ .++ ...+.| ..|+++...++..-..++
T Consensus 86 ~~~~~i~~~i~~i~~l~v~~l~~~l~kk~k~~i~~~~~~~~~ki~l~P~~~K~~~~~lf~yi~~~~~~i~~~~~fi 161 (199)
T PF04276_consen 86 QSSRIINIIICIIVILGVLILRIYLNKKLKKKIYNRNKNSKQKIILIPETFKNFFKNLFAYIFFLFFSIFLFYMFI 161 (199)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcCcceEEEEEEcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444434455555555566666778888776 555 568899 778888888888877777
No 61
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=23.26 E-value=4.2e+02 Score=25.97 Aligned_cols=42 Identities=17% Similarity=0.115 Sum_probs=29.9
Q ss_pred hhhHHHHHHHHHHHhheeeeeccccCCCCCCCCCCccccccC
Q 026475 174 VSGIASEICGFITVLSGTIILHATREHEQTTAPVGTVTWYVS 215 (238)
Q Consensus 174 ~~~~~~f~~G~~ii~~GV~lLs~~~~~~~~~~~~~~~~~~~~ 215 (238)
.|+...+.-|++.++.|++++-.-||.+++.--|....+|=+
T Consensus 183 ~w~~~f~~pgiiaiival~~~~~~rd~Pqs~GLP~ie~~~~d 224 (448)
T COG2271 183 GWRAAFYFPGIIAIIVALILLFLLRDRPQSEGLPPIEEYRGD 224 (448)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHhCCCccccCCCCHHHhhcC
Confidence 567777788999999999999888888765544433444433
No 62
>COG3926 zliS Lysozyme family protein [General function prediction only]
Probab=23.16 E-value=1e+02 Score=27.56 Aligned_cols=29 Identities=14% Similarity=0.185 Sum_probs=26.4
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 026475 112 AYPQTWFFLTVAAVCVVTQLNYLNKALDT 140 (238)
Q Consensus 112 ~~~~ty~~l~~lv~tai~Ql~~LNkAL~~ 140 (238)
..|.+|.+..+++.+...-++|+||.+++
T Consensus 222 ~~P~~~ala~~~~A~~g~gl~~~~~~~~~ 250 (252)
T COG3926 222 LSPLSYALASAVLAIGGLGLWYFNRKVKH 250 (252)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHhhhcc
Confidence 57899999999999999999999999875
No 63
>KOG1690 consensus emp24/gp25L/p24 family of membrane trafficking proteins [Intracellular trafficking, secretion, and vesicular transport]
Probab=23.01 E-value=1.3e+02 Score=26.38 Aligned_cols=30 Identities=17% Similarity=0.008 Sum_probs=23.1
Q ss_pred CCCCcchhHHHHHHHHHHHHHHHHHHHHHH
Q 026475 107 GISQIAYPQTWFFLTVAAVCVVTQLNYLNK 136 (238)
Q Consensus 107 g~~qf~~~~ty~~l~~lv~tai~Ql~~LNk 136 (238)
..|+-.-|-+-+=++++++|++.||++|-+
T Consensus 178 S~NsRvm~Wsv~Q~vvL~~tc~wQmrhL~~ 207 (215)
T KOG1690|consen 178 SANSRVMWWSVAQLVVLLVTCIWQMRHLKS 207 (215)
T ss_pred hhcceeeehhHHHHHHHHHHHHHHHHHHHH
Confidence 336655666666688999999999999865
No 64
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=21.07 E-value=5.1e+02 Score=23.04 Aligned_cols=66 Identities=12% Similarity=0.154 Sum_probs=42.6
Q ss_pred HHHHHHHHhhccccceeecchhhhhHHH---HHHhhhhhhhcccCCCChhhHHHHHHHHHHHhheeeeeccccCCCCCC
Q 026475 129 TQLNYLNKALDTFNAAIVSPVYYVMFTT---LTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILHATREHEQTT 204 (238)
Q Consensus 129 ~Ql~~LNkAL~~fda~~VvPv~~v~ft~---~~ii~g~I~f~e~~~~~~~~~~~f~~G~~ii~~GV~lLs~~~~~~~~~ 204 (238)
.-...-|.||+.-| +|++.++=.. .+.+.|.+++++ +++..+++ +.+.+..|+.+-+..+..+...
T Consensus 76 ~~~~~~~~al~~i~----~p~~~~~ks~~~i~vmi~~~l~~~k--~y~~~~~~----~v~li~~Gv~~~~~~~~~~~~~ 144 (303)
T PF08449_consen 76 LASVLSNAALKYIS----YPTQIVFKSSKPIPVMILGVLILGK--RYSRRQYL----SVLLITIGVAIFTLSDSSSSSS 144 (303)
T ss_pred HHHHHHHHHHHhCC----hHHHHHHhhhHHHHHHHHHHHhcCc--cccHHHHH----HHHHHHhhHheeeecccccccc
Confidence 33456788888844 5777665443 344557777664 56777665 6678888888887665555433
No 65
>PF07297 DPM2: Dolichol phosphate-mannose biosynthesis regulatory protein (DPM2); InterPro: IPR009914 This family consists of several eukaryotic dolichol phosphate-mannose biosynthesis regulatory (DPM2) proteins. Biosynthesis of glycosylphosphatidylinositol and N-glycan precursor is dependent upon a mannosyl donor, dolichol phosphate-mannose (DPM). DPM2, an 84 amino acid membrane protein expressed in the endoplasmic reticulum (ER), makes a complex with DPM1 that is essential for the ER localisation and stable expression of DPM1. Moreover, DPM2 enhances binding of dolichol phosphate, a substrate of DPM synthase. Biosynthesis of DPM in mammalian cells is regulated by DPM2 [].; GO: 0009059 macromolecule biosynthetic process, 0030176 integral to endoplasmic reticulum membrane
Probab=20.57 E-value=44 Score=24.76 Aligned_cols=27 Identities=4% Similarity=-0.017 Sum_probs=18.9
Q ss_pred hhhHHHHHHHHHHHhheeeeeccccCC
Q 026475 174 VSGIASEICGFITVLSGTIILHATREH 200 (238)
Q Consensus 174 ~~~~~~f~~G~~ii~~GV~lLs~~~~~ 200 (238)
|.-+.....+.+-++.|..++..+|++
T Consensus 51 P~~lll~~~~~vg~f~g~vmik~~~kk 77 (78)
T PF07297_consen 51 PIFLLLLGLSGVGTFLGYVMIKSKKKK 77 (78)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhccccc
Confidence 333456666778889999998766643
No 66
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=20.29 E-value=2.7e+02 Score=24.64 Aligned_cols=61 Identities=10% Similarity=0.105 Sum_probs=38.7
Q ss_pred HHHHHHHHHhhccccceeecchhhhhHHHHHHhhhhhhhcccCCCChhhHHHHHHHHHHHhheeeeec
Q 026475 128 VTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQDVSGIASEICGFITVLSGTIILH 195 (238)
Q Consensus 128 i~Ql~~LNkAL~~fda~~VvPv~~v~ft~~~ii~g~I~f~e~~~~~~~~~~~f~~G~~ii~~GV~lLs 195 (238)
.....+-|.|++.=+++.. -+....--..+.+-+.++++| +.+..++. |+++.+.|+.+..
T Consensus 76 ~~~~~~~~~~l~~~s~s~~-~li~~~~Pv~~~ll~~~~~~e--~~~~~~~~----~l~l~~~Gv~l~~ 136 (302)
T TIGR00817 76 TIGHVTSNVSLSKVAVSFT-HTIKAMEPFFSVVLSAFFLGQ--EFPSTLWL----SLLPIVGGVALAS 136 (302)
T ss_pred HHHHHHHHHHHHhccHHHH-HHHHhcchHHHHHHHHHHhCC--CCcHHHHH----HHHHHHHHHhhhc
Confidence 3345789999987666553 233344455566778888885 45665554 6667777776543
Done!