BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026476
(238 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9ZT66|E134_MAIZE Endo-1,3;1,4-beta-D-glucanase OS=Zea mays PE=1 SV=1
Length = 303
Score = 152 bits (383), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 86/195 (44%), Positives = 117/195 (60%), Gaps = 9/195 (4%)
Query: 5 QCCANPPTLNPN----SGAGHV--EKLGGLNAYVTGSPDSKLAVLLISDVYGYEAPNLRK 58
QC NPP + + + AG V + GGL AYV+G+ S AV+L SDV+GYEAP LR+
Sbjct: 28 QCLDNPPDRSIHGRQLAEAGEVVHDLPGGLRAYVSGAASSSRAVVLASDVFGYEAPLLRQ 87
Query: 59 LADKVAAAGFYVAVPDFFHGDPYVADGGKPLQEWIKDHGVDKGFEEAKPVIQALKSKGIT 118
+ DKVA AG++V VPDF GD D K EW++ H K E+AKP+ ALK +G
Sbjct: 88 IVDKVAKAGYFVVVPDFLKGD--YLDDKKNFTEWLEAHSPVKAAEDAKPLFAALKKEG-K 144
Query: 119 AIGAAGFCWGAKVVVQLGKREFIQAAVLLHPSFVTVDDIKGVEVPLSILGAEIDRLSPPA 178
++ G+CWG K+ V++GK ++A L HP VT DD+K V+ P+ ILGA+ D +PP
Sbjct: 145 SVAVGGYCWGGKLSVEVGKTSDVKAVCLSHPYSVTADDMKEVKWPIEILGAQNDTTTPPK 204
Query: 179 LVKEFEEALNAKSGV 193
V F L + V
Sbjct: 205 EVYRFVHVLRERHEV 219
>sp|Q6P7K0|CMBL_XENTR Carboxymethylenebutenolidase homolog OS=Xenopus tropicalis GN=cmbl
PE=2 SV=1
Length = 246
Score = 108 bits (269), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 74/226 (32%), Positives = 111/226 (49%), Gaps = 6/226 (2%)
Query: 18 GAGHVEKLGGLNAYVTGSPDSK-LAVLLISDVYGYEAPNLRKLADKVAAAGFYVAVPDFF 76
G ++ + AYV+ S AV+++ D++G++ PN R +AD + A G+ PDFF
Sbjct: 20 AKGQEVQIEHIKAYVSKPHSSTDKAVIVVQDIFGWQLPNTRFMADLLTAHGYITICPDFF 79
Query: 77 HG-DPYVADGGK-PLQEWIKDHGVDKGFEEAKPVIQALKSKG-ITAIGAAGFCWGAKVVV 133
G +P+ + EW++ K +E V++ LK + + IG GFCWG V
Sbjct: 80 VGQEPWKPSNDRSTFTEWLQTRQATKVEKEINVVLKYLKEQCHVKKIGVIGFCWGGVVTH 139
Query: 134 QLG-KREFIQAAVLLHPSFVTVDDIKGVEVPLSILGAEIDRLSPPALVKEFEEALNAKSG 192
L K ++A V + V+D + P + AE+D + P V EE L S
Sbjct: 140 HLMLKYPELKAGVSFYGIIRDVEDRYNLLNPTLFIFAEMDHVIPLEQVSLLEEKLKVHSK 199
Query: 193 VDSFVKIFPKVAHGWTVRYNVEDETAVKA-AEEAHHNLLEWFAKYV 237
VD VK+FPK HG+ R N + K EEA N+LEW KY+
Sbjct: 200 VDFQVKVFPKQTHGFVHRKNEDINPEDKPFIEEARKNMLEWLHKYI 245
>sp|Q8R1G2|CMBL_MOUSE Carboxymethylenebutenolidase homolog OS=Mus musculus GN=Cmbl PE=2
SV=1
Length = 245
Score = 107 bits (267), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 75/226 (33%), Positives = 111/226 (49%), Gaps = 6/226 (2%)
Query: 18 GAGHVEKLGGLNAYVTGSP-DSKLAVLLISDVYGYEAPNLRKLADKVAAAGFYVAVPDFF 76
G GH ++ + AYVT SP D+ AV+++ D++G++ PN R +AD +A G+ VPDFF
Sbjct: 20 GMGHEVQVEHIKAYVTRSPVDAGKAVIVVQDIFGWQLPNTRYMADMIARNGYTTIVPDFF 79
Query: 77 HG-DPYVADGG-KPLQEWIKDHGVDKGFEEAKPVIQALKSKG-ITAIGAAGFCWGAKVVV 133
G +P+ G W+K K E V++ L+ + IG GFCWG VV
Sbjct: 80 VGQEPWDPAGDWSTFPAWLKSRNARKVNREVDAVLRYLRQQCHAQKIGIVGFCWGGVVVH 139
Query: 134 Q-LGKREFIQAAVLLHPSFVTVDDIKGVEVPLSILGAEIDRLSPPALVKEFEEALNAKSG 192
Q + I+A V ++ +D+ ++ P + AE D + P V + L
Sbjct: 140 QVMTAYPDIRAGVSVYGIIRDSEDVYNLKNPTLFIFAENDTVIPLEQVSTLTQKLKEHCI 199
Query: 193 VDSFVKIFPKVAHGWTVRYNVEDETAVKA-AEEAHHNLLEWFAKYV 237
V+ VK F HG+ R + A K EEA NL+EW KYV
Sbjct: 200 VNYQVKTFSGQTHGFVHRKREDCSPADKPYIEEARRNLIEWLNKYV 245
>sp|Q5XH09|CMBL_XENLA Carboxymethylenebutenolidase homolog OS=Xenopus laevis GN=cmbl PE=2
SV=1
Length = 246
Score = 104 bits (259), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 72/229 (31%), Positives = 111/229 (48%), Gaps = 12/229 (5%)
Query: 18 GAGHVEKLGGLNAYVTGSPDSK-LAVLLISDVYGYEAPNLRKLADKVAAAGFYVAVPDFF 76
G ++ + AYV+ S AV+++ D++G++ PN R +AD + A G+ PDFF
Sbjct: 20 AKGQEIQIEHIKAYVSKPHSSTDKAVIVVQDIFGWQLPNTRFMADLLTAHGYITICPDFF 79
Query: 77 HGDPYV--ADGGKPLQEWIKDHGVDKGFEEAKPVIQALKSKG-ITAIGAAGFCWGAKVVV 133
G ++ EW++ K +E V++ LK + + IG GFCWG V
Sbjct: 80 VGQESWKPSNDWSTFTEWLQTRQATKVEKEMNVVLKYLKEQCHVKKIGVIGFCWGGVVTH 139
Query: 134 QLG-KREFIQAAVLLHPSFVTVDDIKGVEVPLSILGAEIDRLSPPALVKEFEEALNAKSG 192
L K ++A V + V+D + P + AEID + P V E+ L S
Sbjct: 140 HLMLKYPELKAGVSFYGIIRDVEDRYNLLNPTLFIFAEIDHVIPLEQVSLLEQKLKVHSK 199
Query: 193 VDSFVKIFPKVAHGWTVR----YNVEDETAVKAAEEAHHNLLEWFAKYV 237
VD +K+FPK HG+ R N ED+ + EEA ++LEW KY+
Sbjct: 200 VDFQIKVFPKQTHGFVHRKKEDINPEDKPFI---EEARKDMLEWLQKYI 245
>sp|Q96DG6|CMBL_HUMAN Carboxymethylenebutenolidase homolog OS=Homo sapiens GN=CMBL PE=1
SV=1
Length = 245
Score = 100 bits (250), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 73/227 (32%), Positives = 112/227 (49%), Gaps = 8/227 (3%)
Query: 18 GAGHVEKLGGLNAYVTGSP-DSKLAVLLISDVYGYEAPNLRKLADKVAAAGFYVAVPDFF 76
G G ++ + AYVT SP D+ AV++I D++G++ PN R +AD ++ G+ VPDFF
Sbjct: 20 GLGREVQVEHIKAYVTKSPVDAGKAVIVIQDIFGWQLPNTRYIADMISGNGYTTIVPDFF 79
Query: 77 HG-DPYVADGGKPL-QEWIKDHGVDKGFEEAKPVIQALKSKG-ITAIGAAGFCWGAKVVV 133
G +P+ G + EW+K K E +++ LK + IG GFCWG V
Sbjct: 80 VGQEPWDPSGDWSIFPEWLKTRNAQKIDREISAILKYLKQQCHAQKIGIVGFCWGGTAVH 139
Query: 134 QLGKR--EFIQAAVLLHPSFVTVDDIKGVEVPLSILGAEIDRLSPPALVKEFEEALNAKS 191
L + EF +A V ++ +DI ++ P + AE D + P V + L
Sbjct: 140 HLMMKYSEF-RAGVSVYGIVKDSEDIYNLKNPTLFIFAENDVVIPLKDVSLLTQKLKEHC 198
Query: 192 GVDSFVKIFPKVAHGWTVRYNVEDETAVK-AAEEAHHNLLEWFAKYV 237
V+ +K F HG+ R + A K +EA NL+EW KY+
Sbjct: 199 KVEYQIKTFSGQTHGFVHRKREDCSPADKPYIDEARRNLIEWLNKYM 245
>sp|Q5RBU3|CMBL_PONAB Carboxymethylenebutenolidase homolog OS=Pongo abelii GN=CMBL PE=2
SV=1
Length = 245
Score = 100 bits (249), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 73/227 (32%), Positives = 112/227 (49%), Gaps = 8/227 (3%)
Query: 18 GAGHVEKLGGLNAYVTGSP-DSKLAVLLISDVYGYEAPNLRKLADKVAAAGFYVAVPDFF 76
G G ++ + AYVT SP D+ AV++I D++G++ PN R +AD ++ G+ VPDFF
Sbjct: 20 GLGREVQVEHIKAYVTKSPVDAGKAVIVIQDIFGWQLPNTRYMADMISGNGYTTIVPDFF 79
Query: 77 HG-DPYVADGGKPL-QEWIKDHGVDKGFEEAKPVIQALKSKG-ITAIGAAGFCWGAKVVV 133
G +P+ G + EW+K K E +++ LK + IG GFCWG V
Sbjct: 80 VGQEPWDPSGDWSIFPEWLKTRNAQKIDREISAILKYLKQQCHAQKIGIVGFCWGGIAVH 139
Query: 134 QLGKR--EFIQAAVLLHPSFVTVDDIKGVEVPLSILGAEIDRLSPPALVKEFEEALNAKS 191
L + EF +A V ++ +DI ++ P + AE D + P V + L
Sbjct: 140 HLMMKYSEF-RAGVSVYGIVKDSEDIYNLKNPTLFIFAENDVVIPLKDVSLLTQKLKEHC 198
Query: 192 GVDSFVKIFPKVAHGWTVRYNVEDETAVK-AAEEAHHNLLEWFAKYV 237
V+ +K F HG+ R + A K +EA NL+EW KY+
Sbjct: 199 KVEYQIKTFSGQTHGFVHRKREDCSPADKPYIDEARRNLIEWLNKYM 245
>sp|Q7TP52|CMBL_RAT Carboxymethylenebutenolidase homolog OS=Rattus norvegicus GN=Cmbl
PE=2 SV=1
Length = 245
Score = 99.8 bits (247), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 109/226 (48%), Gaps = 6/226 (2%)
Query: 18 GAGHVEKLGGLNAYVTGSP-DSKLAVLLISDVYGYEAPNLRKLADKVAAAGFYVAVPDFF 76
G G ++ + AYVT SP D+ AV+++ D++G++ N R +AD +A G+ VPDFF
Sbjct: 20 GMGQEVQVEHIKAYVTRSPVDAGKAVIVVQDIFGWQLSNTRYMADMIAGNGYTTIVPDFF 79
Query: 77 HG-DPYVADGG-KPLQEWIKDHGVDKGFEEAKPVIQALKSKG-ITAIGAAGFCWGAKVVV 133
G +P+ G EW+K K E V++ LK + IG GFCWG VV
Sbjct: 80 VGQEPWDPAGDWSTFPEWLKSRNARKINREVDAVLRYLKQQCHAQKIGIVGFCWGGIVVH 139
Query: 134 Q-LGKREFIQAAVLLHPSFVTVDDIKGVEVPLSILGAEIDRLSPPALVKEFEEALNAKSG 192
+ ++A V ++ +D+ ++ P + AE D + P V + L
Sbjct: 140 HVMTTYPEVRAGVSVYGIIRDSEDVYNLKNPTLFIFAENDAVIPLEQVSILIQKLKEHCI 199
Query: 193 VDSFVKIFPKVAHGWTVRYNVEDETAVK-AAEEAHHNLLEWFAKYV 237
V+ VK F HG+ R + A K EEA NL+EW KY+
Sbjct: 200 VNYQVKTFSGQTHGFVHRKREDCSPADKPYIEEARRNLIEWLNKYI 245
>sp|P39721|AIM2_YEAST Protein AIM2 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=AIM2 PE=1 SV=1
Length = 246
Score = 95.5 bits (236), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 112/239 (46%), Gaps = 7/239 (2%)
Query: 4 PQCCANPPTLNPNSGAGHVEKLGGLNAYVTGSPDSKLAVLLI-SDVYGYEAPNLRKLADK 62
P C + + G E++ GL+ Y GS K V++I +DVYG + N+ ADK
Sbjct: 6 PGKCCFEGVCHDGTPKGRREEIFGLDTYAAGSTSPKEKVIVILTDVYGNKFNNVLLTADK 65
Query: 63 VAAAGFYVAVPDFFHGDPYVADGGKPLQEWIKDHGVDKGFEEAKPVIQALKSK-GITAIG 121
A+AG+ V VPD GD +D W + H + + ++ LK + IG
Sbjct: 66 FASAGYMVFVPDILFGDAISSDKPIDRDAWFQRHSPEVTKKIVDGFMKLLKLEYDPKFIG 125
Query: 122 AAGFCWGAKVVVQ--LGKREFIQAAVLLHPSFVTVDDIKGVEV--PLSILGAEIDRLSPP 177
G+C+GAK VQ G AA + HPSFV++++I+ ++ P+ I AE D + P
Sbjct: 126 VVGYCFGAKFAVQHISGDGGLANAAAIAHPSFVSIEEIEAIDSKKPILISAAEEDHIFPA 185
Query: 178 ALVKEFEEALNAKSGVDSFVKIFPKVAHGWTVRYNVEDETAVKAAEEAHHNLLEWFAKY 236
L EE L + +F VAHG+ R ++ A E+ + + WF +
Sbjct: 186 NLRHLTEEKLKDNHATYQ-LDLFSGVAHGFAARGDISIPAVKYAKEKVLLDQIYWFNHF 243
>sp|O14359|YB4E_SCHPO Uncharacterized AIM2 family protein C30D10.14
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPBC30D10.14 PE=3 SV=1
Length = 249
Score = 78.2 bits (191), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 101/232 (43%), Gaps = 29/232 (12%)
Query: 21 HVEKLGGLNAYVTGSPDSKLAVLLISDVYGYEAPNLRKLADKVAAAGFYVAVPDFFHGDP 80
+E GGL YV GS + ++ D++G + +++ ADK+A GF V +PDF G P
Sbjct: 24 EIENFGGLTTYVVGSTSNTRVLIGFMDIFGL-SDQIKEGADKLADDGFTVYLPDFLEGKP 82
Query: 81 YVADGGKPLQEWIKDHGVDKGFEEAK-----------PVIQALKSKG--ITAIGAAGFCW 127
P +D + F + V++A+++ IG GFCW
Sbjct: 83 LPVTALPPKTP--EDQKLCNDFFSTRISPNLHWPKLAKVVEAVRANHGPNVTIGTYGFCW 140
Query: 128 GAKVVVQLGKREFIQAAVLLHPSFVTVDDIKGVEVPLSILGAEIDRLSPPALVKEFEEAL 187
GAKV+V HPSF D V P+ L ++ + ++KE+EEA
Sbjct: 141 GAKVLVTYPATIDFVGIASCHPSFPDSADAANVHCPVLFLCSKDEDAK---IIKEWEEAF 197
Query: 188 N-----AKSGVDSFVKIFPKVAHGWT-VRYNVEDETAVKAAEEAHHNLLEWF 233
AKS ++F +F HGW R ++ + K +E + + +F
Sbjct: 198 KTNPAYAKSSFETFSDMF----HGWMAARADLSNPEQRKRFDEGYQKVSSFF 245
>sp|Q9P7U1|YI7F_SCHPO Uncharacterized AIM2 family protein C977.15 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPAC977.15 PE=3 SV=1
Length = 247
Score = 77.0 bits (188), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 109/245 (44%), Gaps = 21/245 (8%)
Query: 6 CC-----ANPPTLNPNSGAGHVEKLGGLNAYVTGSPDSKLAVLLISDVYGYEAPNLRKLA 60
CC A P N ++ +GG+ Y TG SK+ ++ DV+G + +++ A
Sbjct: 3 CCPTKSGAAPTNRNYELQGEMLKDIGGMQTYFTGKRSSKVVLIGFMDVFGL-SKQIKEGA 61
Query: 61 DKVAAAGFYVAVPDFFHG--------DPYVADGGKPLQEWIKDHGVDKGFEEAKPVIQAL 112
D++A + +PDF +G DP + + ++++ + + VI+ +
Sbjct: 62 DQLANHELAIYLPDFLNGETASIEMIDPKTIEQKEARSKFMEKISSPLHWPKLTKVIEDI 121
Query: 113 KS--KGITAIGAAGFCWGAKVVVQLGKREFIQAAVLLHPSFVTVDDIKGVEVPLSILGA- 169
+ IGA GFCWGAKV++ +E HPS + D K V P+ L +
Sbjct: 122 ERIHGQDVKIGAYGFCWGAKVLITYPNKERFLRIGCAHPSLLDPVDAKHVHCPVCFLCSK 181
Query: 170 EIDRLSPPALVKEFEEALNAKSGVDSFVKIFPKVAHGWT-VRYNVEDETAVKAAEEAHHN 228
+ D A K FE N+ +S+ + F K+ HGW R N+ D K + +
Sbjct: 182 DEDPEEVDAWKKSFE---NSPYFSESYFETFGKMHHGWMAARANLSDPENRKYFDLGYQI 238
Query: 229 LLEWF 233
L++F
Sbjct: 239 FLKFF 243
>sp|O67802|DLHH_AQUAE Putative carboxymethylenebutenolidase OS=Aquifex aeolicus (strain
VF5) GN=aq_1997 PE=3 SV=1
Length = 231
Score = 62.0 bits (149), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 100/210 (47%), Gaps = 17/210 (8%)
Query: 41 AVLLISDVYGYEAP--NLRKLADKVAAAGFYVAVPDFFHG----DPYVADGGKPLQEWIK 94
AVL+ + +G E+P N++++ DK+A GF PDF+ G +P D GK + E +
Sbjct: 27 AVLVFHEWWGLESPLSNIKEICDKLADEGFVAFAPDFYKGQYADNP--DDAGKLMTEMFE 84
Query: 95 DH--GVDKGFEEAKPVIQALKSKGITAIGAAGFCWGAKVVVQLGKR--EFIQAAVLLH-- 148
VD+ F+ + ++ + +G GFC G + + + E + A++ +
Sbjct: 85 KRMDEVDRIFQASVEFVKECRYTYPKKVGITGFCCGGTLAMYFAAKFPEMVDASLPFYGL 144
Query: 149 PSFVTVDDIKGVEVPLSILGAEIDRLSPPALVKEFEEALNAKSGVDSFVKIFPKVAHGWT 208
P + + + ++VP+ + AE D V + + + K+GVD VK+F V H +
Sbjct: 145 PQLTQI-NAENIKVPIFFILAEKDEFVNNDEVIDIAKTV-WKNGVDVQVKVFSGVTHAF- 201
Query: 209 VRYNVEDETAVKAAEEAHHNLLEWFAKYVK 238
+ ED K A EA + +F Y+K
Sbjct: 202 LNEKREDVYDPKRACEAWELAVNFFKTYLK 231
>sp|P46209|USF_AQUPY Protein usf OS=Aquifex pyrophilus GN=usf PE=4 SV=1
Length = 231
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 101/208 (48%), Gaps = 17/208 (8%)
Query: 42 VLLISDVYGYEAP--NLRKLADKVAAAGFYVAVPDFFHG----DPYVADGGKPLQEWIKD 95
V++I + +G E+P N++++ D+ A GF PDF+ G +P D GK + + ++
Sbjct: 28 VIVIHEWWGLESPLSNIKEICDRFAQEGFVAFAPDFYEGKYADNP--DDAGKLMTDMFEN 85
Query: 96 H--GVDKGFEEAKPVIQALKSKGITAIGAAGFCWGAKVVVQLGKR--EFIQAAVLLH--P 149
VD F+ + ++ + +G GFC G + + + + I A+V + P
Sbjct: 86 RMDKVDAIFKASVDFLKECRYTSPKKVGVTGFCCGGTLSMYFAGKFPDLIDASVPFYGLP 145
Query: 150 SFVTVDDIKGVEVPLSILGAEIDRLSPPALVKEFEEALNAKSGVDSFVKIFPKVAHGWTV 209
+T D + ++VP+ + AE D V + + + K+GVD VK++ V H + +
Sbjct: 146 Q-ITKIDAENIKVPIFFILAEKDEFVNNDEVIDIAKKV-WKNGVDVKVKVYSGVTHAF-L 202
Query: 210 RYNVEDETAVKAAEEAHHNLLEWFAKYV 237
ED A++A + + +F +Y+
Sbjct: 203 NEKREDVYDPCRAQDAWNLTVAFFKEYL 230
>sp|Q7DFU6|YGHX_ECOLI Putative uncharacterized protein YghX OS=Escherichia coli (strain
K12) GN=yghX PE=5 SV=3
Length = 278
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 93/209 (44%), Gaps = 26/209 (12%)
Query: 41 AVLLISDVYGYEAPNLRKLADKVAAAGFYVAVPDFFH---GDPYVADGGKPLQEWIKDHG 97
AV+++ + G P + +A +VA AG+ PD G P D G+ LQ+ +
Sbjct: 83 AVVVVHENRGLN-PYIEDVARRVAKAGYIALAPDGLSSVGGYPGNDDKGRELQQQVDPTN 141
Query: 98 VDKGFEEAKPVIQALKSKGITAIGAAGFCWGAKV--VVQLGKREFIQAAVLLHPSFVTVD 155
+ F A +Q + +G GFC+G V + E + AV +
Sbjct: 142 LMNDFFAAIEFMQRY-PQATGKVGITGFCYGGGVSNAAAVAYPE-LACAVPFYGRQAPTA 199
Query: 156 DIKGVEVPLSILGAEID-RLSP--PALVKEFEEALNAKSGVDSFVKIFPKVAHGW----T 208
D+ +E PL + AE+D R++ PA +E AL A + V I+P V HG+ T
Sbjct: 200 DVAKIEAPLLLHFAELDTRINEGWPA----YEAALKANNKVYE-AYIYPGVNHGFHNDST 254
Query: 209 VRYNVEDETAVKAAEEAHHNLLEWFAKYV 237
RY+ AA+ A L+WF KY+
Sbjct: 255 PRYDKS------AADLAWQRTLKWFDKYL 277
>sp|Q54MZ9|CMBL_DICDI Carboxymethylenebutenolidase homolog OS=Dictyostelium discoideum
GN=cmbl PE=3 SV=1
Length = 255
Score = 40.8 bits (94), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 95/222 (42%), Gaps = 40/222 (18%)
Query: 29 NAYVTGSPDSKLA---VLLISDVYGYEAPNLRKLADKVAAAGFYVAVPDFFH--GDPYV- 82
+AYV+ DS+ V+ + D +G L ++ADK+A G++V P+F++ G +
Sbjct: 17 DAYVSRPKDSQKELKPVIFVMDAFGLR-DWLYEMADKIAEEGYFVVQPNFYYRIGKNIIT 75
Query: 83 -------ADGGKPLQEWIKDHGVDKGFEEAKPVIQAL-----KSKGIT----AIGAAGFC 126
AD + I+ EE + + K +G+ + G+C
Sbjct: 76 NLEKLKSADTKDEVICQIRTQMAKINREETVSDVSEMFDFIDKQEGVRKSKEGVAIVGYC 135
Query: 127 WGAKVVVQ--LGKREFIQAAVLLHPSFVTVDD--------IKGVEVPLSILGAEIDRLSP 176
+G V ++ + + ++ H + + D +KGV+ A+ D+ P
Sbjct: 136 FGGGVAMRSAIAFPDIVKVVASFHAGRLAIPDDENSIHKHLKGVKAECYFGHADNDQSMP 195
Query: 177 PALVKEFEEALNAKSGVDSFVKIF--PKVAHGW----TVRYN 212
+ FE++L ++G+ +I+ P AHGW T+ YN
Sbjct: 196 LDQIHLFEKSL-TEAGIKYTSEIYNNPSCAHGWVMGDTLMYN 236
>sp|Q8X8L4|DLHH_ECO57 Putative carboxymethylenebutenolidase OS=Escherichia coli O157:H7
GN=ysgA PE=3 SV=1
Length = 271
Score = 39.7 bits (91), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 44/211 (20%), Positives = 82/211 (38%), Gaps = 20/211 (9%)
Query: 42 VLLISDVYGYEAPNLRKLADKVAAAGFYVAVPD--FFHGDPY-VADGGKPLQEWIKDHGV 98
V+++ +++G ++R + ++A G+ P+ F GDP AD L +
Sbjct: 59 VIVVQEIFGVHE-HIRDICRRLALEGYLAIAPELYFREGDPNDFADIPTLLSGLVAKVPD 117
Query: 99 DKGFEEAKPVIQALKSKG--ITAIGAAGFCWGAKVV-VQLGKREFIQAAVLLHPSFV--- 152
+ + V G + + GFCWG ++ + ++AAV +
Sbjct: 118 SQVLADLDHVASWASRNGGDVHRLMITGFCWGGRITWLYAAHNPQLKAAVAWYGKLTGDK 177
Query: 153 -------TVDDIKGVEVPLSILGAEIDRLSPPALVKEFEEALNAKSGVDSFVKIFPKVAH 205
VD + P+ L +D P V+ +AL A + + ++P H
Sbjct: 178 SLNSPKQPVDIATDLNAPVLGLYGGLDNSIPQESVETMRQALRAANAKAEII-VYPDAGH 236
Query: 206 GWTVRYNVEDETAVKAAEEAHHNLLEWFAKY 236
+ Y A +AE+ +LEWF +Y
Sbjct: 237 AFNADYRPSYHAA--SAEDGWQRMLEWFKQY 265
>sp|P56262|DLHH_ECOLI Putative carboxymethylenebutenolidase OS=Escherichia coli (strain
K12) GN=ysgA PE=3 SV=3
Length = 271
Score = 39.3 bits (90), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 83/211 (39%), Gaps = 20/211 (9%)
Query: 42 VLLISDVYGYEAPNLRKLADKVAAAGFYVAVPD--FFHGDPY-VADGGKPLQEWIKDHGV 98
V+++ +++G ++R + ++A G+ P+ F GDP AD L +
Sbjct: 59 VIVVQEIFGVHE-HIRDICRRLALEGYLAIAPELYFREGDPNDFADIPTLLSGLVAKVPD 117
Query: 99 DKGFEEAKPVIQALKSKG--ITAIGAAGFCWGAKVV-VQLGKREFIQAAVLLHPSFVTVD 155
+ + V G + + GFCWG ++ + ++AAV +
Sbjct: 118 SQVLADLDHVASWASRNGGDVHRLMITGFCWGGRITWLYAAHNPQLKAAVAWYGKLTGDK 177
Query: 156 DIKGVEVPLSI---LGAEI-------DRLSPPALVKEFEEALNAKSGVDSFVKIFPKVAH 205
+ + P+ I L A I D P V+ +AL A + + ++P H
Sbjct: 178 SLNSPKQPVDIATDLNAPILGLYGGQDNSIPQESVETMRQALRAANAKAEII-VYPDAGH 236
Query: 206 GWTVRYNVEDETAVKAAEEAHHNLLEWFAKY 236
+ Y A +AE+ +LEWF +Y
Sbjct: 237 AFNADYRPSYHAA--SAEDGWQRMLEWFKQY 265
>sp|O67988|CLCD_RHOOP Carboxymethylenebutenolidase OS=Rhodococcus opacus GN=clcD PE=3
SV=1
Length = 252
Score = 38.9 bits (89), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 85/224 (37%), Gaps = 33/224 (14%)
Query: 33 TGSPDSKLAVLLISDVYGYEAPNLRKLADKVAAAGFYVAVPDFFHGDPYVADGGKPLQEW 92
TGS D+ ++L++D++G P R LA +A G V +PD FH + D G+
Sbjct: 37 TGSGDT---IVLLTDIFGV-TPFYRHLAAMLAEKGHDVVIPDVFHRVGHATDPGRDAALA 92
Query: 93 IKDHGVDKGFEEAKPVIQALKSKGITAIGAAGFCWGAKVVVQLGKREFIQAAVLLHPSFV 152
+ D+ E A G GFC G G + AA HP+ V
Sbjct: 93 RRRQLDDRLAIEDIERTVAHTVDDQQTFGVLGFCLG-------GSFALLTAAA--HPNQV 143
Query: 153 TVD------DIKGVEVPLSILGAEIDRLSPPAL-------------VKEFEEALNAKSGV 193
T G +VP+ D + P L + + E+ L + G
Sbjct: 144 TATYYAFPKGAPGAKVPVKPPLEAADAIDGPVLCHWGRDDYIDHEEIDQLEQILASAPG- 202
Query: 194 DSFVKIFPKVAHGWTVRYNVEDETAVKAAEEAHHNLLEWFAKYV 237
S ++ + H + + + AA ++ +E+F +Y+
Sbjct: 203 PSEIRWYDNAGHSFLAGLTEPNHPSTAAAHDSWQRTVEFFERYL 246
>sp|Q8Z3B8|DLHH_SALTI Putative carboxymethylenebutenolidase OS=Salmonella typhi GN=ysgA
PE=3 SV=1
Length = 270
Score = 38.5 bits (88), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 84/211 (39%), Gaps = 20/211 (9%)
Query: 42 VLLISDVYGYEAPNLRKLADKVAAAGFYVAVPD--FFHGDPY-VADGGKPLQEWIKDHGV 98
V+++ +++G ++R + ++A G+ P+ F GDP AD L +
Sbjct: 59 VIVVQEIFGVHE-HIRDICRRLALEGYLAIAPELYFREGDPNDFADIPTLLSGLVAKVPD 117
Query: 99 DKGFEEAKPVIQALKSKGITA--IGAAGFCWGAKVV-VQLGKREFIQAAVLLHPSFV--- 152
+ + V G A + GFCWG ++ + ++AAV + V
Sbjct: 118 SQVLADLDHVASWASRNGGDAHRLMITGFCWGGRITWLYAAHNPQLKAAVAWYGKLVGDT 177
Query: 153 -------TVDDIKGVEVPLSILGAEIDRLSPPALVKEFEEALNAKSGVDSFVKIFPKVAH 205
VD + P+ L + D P V+ +AL A + V ++P H
Sbjct: 178 SLNSPKHPVDIATDLNAPVLGLYSGQDTSIPQESVETMRQALRAANAKAEIV-VYPDAGH 236
Query: 206 GWTVRYNVEDETAVKAAEEAHHNLLEWFAKY 236
+ Y A +A++ +LEWFA+Y
Sbjct: 237 AFNADYRPGYHEA--SAKDGWQRMLEWFAQY 265
>sp|Q9L6M9|DLHH_SALTY Putative carboxymethylenebutenolidase OS=Salmonella typhimurium
(strain LT2 / SGSC1412 / ATCC 700720) GN=ysgA PE=3 SV=1
Length = 270
Score = 37.7 bits (86), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 85/211 (40%), Gaps = 20/211 (9%)
Query: 42 VLLISDVYGYEAPNLRKLADKVAAAGFYVAVPD--FFHGDPY-VADGGKPLQEWIKDHGV 98
V+++ +++G ++R + ++A G+ P+ F GDP AD L +
Sbjct: 59 VIVVQEIFGVHE-HIRDICRRLALEGYLAIAPELYFREGDPNDFADIPTLLSGLVAKVPD 117
Query: 99 DKGFEEAKPVIQALKSKGITA--IGAAGFCWGAKVV-VQLGKREFIQAAVLLHPSFVTVD 155
+ + V G A + GFCWG ++ + ++AAV + V
Sbjct: 118 SQVLADLDHVASWASRNGGDAHRLMITGFCWGGRITWLYAAHNPQLKAAVAWYGKLVGDT 177
Query: 156 DIKGVEVPLSI---LGAEI-------DRLSPPALVKEFEEALNAKSGVDSFVKIFPKVAH 205
+ + P+ I L A + D P V+ +AL A + V ++P H
Sbjct: 178 SLNSPKHPVDIATDLNAPVLGLYGGQDTSIPQESVETMRQALRAANAKAEIV-VYPDAGH 236
Query: 206 GWTVRYNVEDETAVKAAEEAHHNLLEWFAKY 236
+ Y A +A++ +LEWFA+Y
Sbjct: 237 AFNADYRPGYHEA--SAKDGWQRMLEWFAQY 265
>sp|P71505|DLHH_METEA Putative carboxymethylenebutenolidase OS=Methylobacterium
extorquens (strain ATCC 14718 / DSM 1338 / AM1)
GN=MexAM1_META1p1735 PE=3 SV=2
Length = 291
Score = 37.4 bits (85), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 40/212 (18%), Positives = 85/212 (40%), Gaps = 21/212 (9%)
Query: 42 VLLISDVYGYEAPNLRKLADKVAAAGFYVAVPDFF--HGD-PYVADGGKPLQEWIK---D 95
+L++ +++G +++ + ++A G++ P+ + GD + + + + E + D
Sbjct: 81 ILVVQEIFGVH-EHIKDVCRRLAKLGYFALAPELYARQGDVSTLTNIQQIVSEVVSKVPD 139
Query: 96 HGVDKGFEEAKPVIQALKSKGITAIGAAGFCWGAKVV-VQLGKREFIQAAVLLHPSFV-- 152
V + A + +G GFCWG ++ + ++A V + V
Sbjct: 140 AQVMSDLDAAVAFAKGTGKADTARLGITGFCWGGRITWLYAAHNPAVKAGVAWYGRLVGD 199
Query: 153 --------TVDDIKGVEVPLSILGAEIDRLSPPALVKEFEEALNAKSGVDSFVKIFPKVA 204
VD ++ P+ L D+ P A + +EA A FV ++P+
Sbjct: 200 SSALMPKNPVDVAADLKAPVLGLYGGADQGIPVATIDRMKEACRAAGKTCDFV-VYPEAG 258
Query: 205 HGWTVRYNVEDETAVKAAEEAHHNLLEWFAKY 236
H + Y + A++ L +WF +Y
Sbjct: 259 HAFHADY--RPSYRAEPAQDGWKRLQDWFRQY 288
>sp|Q92KZ7|SP39_RHIME Probable sugar-binding periplasmic protein OS=Rhizobium meliloti
(strain 1021) GN=R03301 PE=3 SV=1
Length = 414
Score = 33.5 bits (75), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 72/188 (38%), Gaps = 39/188 (20%)
Query: 15 PNSGAGHVEKLGGLNAYVTGSPDSKLAVLLISDVYGYEAP----NLRKLA-----DKVAA 65
P +G G E + L A VT +L D+ + NL ++A DKV
Sbjct: 59 PVAGGGGTEAMTVLRARVTAGNAPTAVQMLGFDILDWAKEGALGNLDEVAAKEGWDKVVP 118
Query: 66 A---------GFYVAVPDFFHGDPYVADGGKPLQEWIKDHGVDKG-------FEEAKPVI 109
A G ++A P H +V WI +DK +EE ++
Sbjct: 119 AALQQFSKYDGHWIAAPVNVHSTNWV---------WINKAALDKAGAKEPTTWEELIALL 169
Query: 110 QALKSKGITAIGAAGFCWG-----AKVVVQLGKREFIQAAVLLHPSFVTVDDIKGVEVPL 164
K +GIT I G W VV+ LG + QA + L P+ + D +K +
Sbjct: 170 DKFKEQGITPIAHGGQPWQDATIFDAVVLSLGNDFYKQAFIDLDPAALGGDKMKEAFDRM 229
Query: 165 SILGAEID 172
+ L + +D
Sbjct: 230 TKLRSYVD 237
>sp|P73163|DLHH_SYNY3 Putative carboxymethylenebutenolidase OS=Synechocystis sp. (strain
PCC 6803 / Kazusa) GN=sll1298 PE=3 SV=1
Length = 246
Score = 33.1 bits (74), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 88/224 (39%), Gaps = 39/224 (17%)
Query: 42 VLLISDVYGYEAPNLRKLADKVAAAGFYVAV---------PDFFHG-DPYVADGGKPLQE 91
V++I +++G + ++R + ++VA G YVA+ P F G P + G+ L++
Sbjct: 35 VIVIQEIFGVNS-HIRDVTERVAKEG-YVAIAPAIYQRQAPGFEEGYTPEGIEAGRKLKD 92
Query: 92 WIKDHGVDKGFEEAKPVIQALKSKGITAIGAAGFCWGAKVVVQLGKREFIQAAVLLH--- 148
+ E Q L + +G GFC+G +V ++A +
Sbjct: 93 QTSSAEILSDLEATIAYAQTLPNVKPEEVGLIGFCFGGWIVYLGASLPTVKATASFYGAG 152
Query: 149 ----------PSFVTVDDIKGVEVPLSILGAEIDRLSPPALVKEFEEALNAKSGVDSFVK 198
P D I+G + G E D P A ++ E+AL K V+ +
Sbjct: 153 IPHWAPGTAEPPITYTDKIQGTL--YAFFGLE-DTSIPMADTEQIEQALT-KYQVNHKIF 208
Query: 199 IFPKVAHGW----TVRYNVEDETAVKAAEEAHHNLLEWFAKYVK 238
+P HG+ YN E AA +A + + F +K
Sbjct: 209 RYPGADHGFFCDQRASYNAE------AAADAWQKVKQLFQTELK 246
>sp|Q7NCQ9|SYV_GLOVI Valine--tRNA ligase OS=Gloeobacter violaceus (strain PCC 7421)
GN=valS PE=3 SV=1
Length = 897
Score = 32.3 bits (72), Expect = 3.2, Method: Composition-based stats.
Identities = 12/40 (30%), Positives = 22/40 (55%)
Query: 57 RKLADKVAAAGFYVAVPDFFHGDPYVADGGKPLQEWIKDH 96
+++ + AA G+ V + D H PY GG P++ ++ D
Sbjct: 321 KQVVARAAAEGWLVGIEDHVHNVPYSERGGVPIEPYLSDQ 360
>sp|Q8ZAL4|DLHH_YERPE Putative carboxymethylenebutenolidase OS=Yersinia pestis GN=YPO3787
PE=3 SV=1
Length = 267
Score = 31.6 bits (70), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 26/128 (20%), Positives = 53/128 (41%), Gaps = 14/128 (10%)
Query: 120 IGAAGFCWGAKVV-VQLGKREFIQAAVLLHPSFV----------TVDDIKGVEVPLSILG 168
+ GFCWG ++ + ++AAV + V VD + P+ L
Sbjct: 131 LAITGFCWGGRIAWLYAAHNPQLKAAVAWYGKLVGEKTLFLPKYPVDVAIDLCAPVLGLY 190
Query: 169 AEIDRLSPPALVKEFEEALNAKSGVDSFVKIFPKVAHGWTVRYNVEDETAVKAAEEAHHN 228
D P ++ +AL A + D+ + ++P+ H + Y ++A++
Sbjct: 191 GGKDTSIPAEHIETMRQALRA-ANADAEIIVYPEAGHAFNADY--RPSYHAESAQDGWQR 247
Query: 229 LLEWFAKY 236
+L+WF ++
Sbjct: 248 MLDWFTQH 255
>sp|Q046E7|ALR_LACGA Alanine racemase OS=Lactobacillus gasseri (strain ATCC 33323 /
DSM 20243) GN=alr PE=3 SV=1
Length = 376
Score = 31.6 bits (70), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 26/39 (66%)
Query: 36 PDSKLAVLLISDVYGYEAPNLRKLADKVAAAGFYVAVPD 74
P K+ ++ ++ YG+ A + K+AD++ AAGF VA+ D
Sbjct: 31 PGQKMLAVVKANGYGHGAVEVAKVADQIGAAGFCVAILD 69
>sp|Q5FMB2|ALR_LACAC Alanine racemase OS=Lactobacillus acidophilus (strain ATCC 700396
/ NCK56 / N2 / NCFM) GN=alr PE=3 SV=1
Length = 376
Score = 31.2 bits (69), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 26/39 (66%)
Query: 36 PDSKLAVLLISDVYGYEAPNLRKLADKVAAAGFYVAVPD 74
P K+ ++ ++ YG+ A + K+A++V AAGF VAV D
Sbjct: 31 PGQKMLAVVKANAYGHGAVEVAKVAEEVGAAGFCVAVLD 69
>sp|Q6G2V3|SYV_BARHE Valine--tRNA ligase OS=Bartonella henselae (strain ATCC 49882 /
Houston 1) GN=valS PE=3 SV=1
Length = 907
Score = 31.2 bits (69), Expect = 6.3, Method: Composition-based stats.
Identities = 16/46 (34%), Positives = 23/46 (50%)
Query: 67 GFYVAVPDFFHGDPYVADGGKPLQEWIKDHGVDKGFEEAKPVIQAL 112
G+ V V D H PY G P++ ++ D E AKP I+A+
Sbjct: 356 GYLVTVDDHPHTVPYGDRSGVPIEPFLTDQWYVNAAELAKPAIEAV 401
>sp|Q2LVG6|QUEA_SYNAS S-adenosylmethionine:tRNA ribosyltransferase-isomerase
OS=Syntrophus aciditrophicus (strain SB) GN=queA PE=3
SV=1
Length = 362
Score = 31.2 bits (69), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 40/94 (42%), Gaps = 2/94 (2%)
Query: 85 GGKPLQEWIKDHGVDKGFEEAKPVIQAL--KSKGITAIGAAGFCWGAKVVVQLGKREFIQ 142
G PL +IK + E + Q + +S G A AGF + + L + E +
Sbjct: 165 GKAPLPPYIKREKKNAQMPEDRDRYQTIYARSPGSIAAPTAGFHFSEALFKTLRELEIVI 224
Query: 143 AAVLLHPSFVTVDDIKGVEVPLSILGAEIDRLSP 176
A V LH F T I+ +V ++ E +SP
Sbjct: 225 APVTLHVGFGTFTPIETEDVEDHVMEVESFSISP 258
>sp|A4IVS5|TRPA_FRATW Tryptophan synthase alpha chain OS=Francisella tularensis subsp.
tularensis (strain WY96-3418) GN=trpA PE=3 SV=1
Length = 269
Score = 31.2 bits (69), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 27/49 (55%)
Query: 26 GGLNAYVTGSPDSKLAVLLISDVYGYEAPNLRKLADKVAAAGFYVAVPD 74
G+ + D+ + +LI+DV +E+ R +A KV+ A ++A PD
Sbjct: 110 NGIENFYQKCLDAGVDSILIADVPAHESKEFRDIAKKVSIAQIFIAPPD 158
>sp|C3NE26|GCSPB_SULIY Probable glycine dehydrogenase [decarboxylating] subunit 2
OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone
#1) GN=gcvPB PE=3 SV=1
Length = 509
Score = 30.8 bits (68), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 47/106 (44%), Gaps = 7/106 (6%)
Query: 127 WGAKVVVQLGKREFIQAAVLLHPSFVTVDDIKGVEVPLSIL---GAEIDRLSPPALVKEF 183
W ++ +L + +L++ +IK +++P ++L G + LS +V+ F
Sbjct: 8 WDEPLIFELNNSGANRQGLLINKDDEIRSEIKEMKIPKNLLRENGPNLPSLSELEVVRHF 67
Query: 184 EEALNAKSGVDSFVKIFPKVAHGWTVRYNVEDETAVKAAEEAHHNL 229
GVD V I P T++YN + E A E+HH L
Sbjct: 68 IRLSQMNFGVD--VGIMP--LGSCTMKYNPKIEEKATAITESHHPL 109
>sp|C3NHN7|GCSPB_SULIN Probable glycine dehydrogenase [decarboxylating] subunit 2
OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone
#2) GN=gcvPB PE=3 SV=1
Length = 509
Score = 30.8 bits (68), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 47/106 (44%), Gaps = 7/106 (6%)
Query: 127 WGAKVVVQLGKREFIQAAVLLHPSFVTVDDIKGVEVPLSIL---GAEIDRLSPPALVKEF 183
W ++ +L + +L++ +IK +++P ++L G + LS +V+ F
Sbjct: 8 WDEPLIFELNNSGANRQGLLINKDDEIRSEIKEMKIPKNLLRENGPNLPSLSELEVVRHF 67
Query: 184 EEALNAKSGVDSFVKIFPKVAHGWTVRYNVEDETAVKAAEEAHHNL 229
GVD V I P T++YN + E A E+HH L
Sbjct: 68 IRLSQMNFGVD--VGIMP--LGSCTMKYNPKIEEKATAITESHHPL 109
>sp|C3MUU9|GCSPB_SULIM Probable glycine dehydrogenase [decarboxylating] subunit 2
OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1)
GN=gcvPB PE=3 SV=1
Length = 509
Score = 30.8 bits (68), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 47/106 (44%), Gaps = 7/106 (6%)
Query: 127 WGAKVVVQLGKREFIQAAVLLHPSFVTVDDIKGVEVPLSIL---GAEIDRLSPPALVKEF 183
W ++ +L + +L++ +IK +++P ++L G + LS +V+ F
Sbjct: 8 WDEPLIFELNNSGANRQGLLINKDDEIRSEIKEMKIPKNLLRENGPNLPSLSELEVVRHF 67
Query: 184 EEALNAKSGVDSFVKIFPKVAHGWTVRYNVEDETAVKAAEEAHHNL 229
GVD V I P T++YN + E A E+HH L
Sbjct: 68 IRLSQMNFGVD--VGIMP--LGSCTMKYNPKIEEKATAITESHHPL 109
>sp|C3MPT6|GCSPB_SULIL Probable glycine dehydrogenase [decarboxylating] subunit 2
OS=Sulfolobus islandicus (strain L.S.2.15 / Lassen #1)
GN=gcvPB PE=3 SV=1
Length = 509
Score = 30.8 bits (68), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 47/106 (44%), Gaps = 7/106 (6%)
Query: 127 WGAKVVVQLGKREFIQAAVLLHPSFVTVDDIKGVEVPLSIL---GAEIDRLSPPALVKEF 183
W ++ +L + +L++ +IK +++P ++L G + LS +V+ F
Sbjct: 8 WDEPLIFELNNSGANRQGLLINKDDEIRSEIKEMKIPKNLLRENGPNLPSLSELEVVRHF 67
Query: 184 EEALNAKSGVDSFVKIFPKVAHGWTVRYNVEDETAVKAAEEAHHNL 229
GVD V I P T++YN + E A E+HH L
Sbjct: 68 IRLSQMNFGVD--VGIMP--LGSCTMKYNPKIEEKATAITESHHPL 109
>sp|C4KH28|GCSPB_SULIK Probable glycine dehydrogenase [decarboxylating] subunit 2
OS=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3)
GN=gcvPB PE=3 SV=1
Length = 509
Score = 30.8 bits (68), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 47/106 (44%), Gaps = 7/106 (6%)
Query: 127 WGAKVVVQLGKREFIQAAVLLHPSFVTVDDIKGVEVPLSIL---GAEIDRLSPPALVKEF 183
W ++ +L + +L++ +IK +++P ++L G + LS +V+ F
Sbjct: 8 WDEPLIFELNNSGANRQGLLINKDDEIRSEIKEMKIPKNLLRENGPNLPSLSELEVVRHF 67
Query: 184 EEALNAKSGVDSFVKIFPKVAHGWTVRYNVEDETAVKAAEEAHHNL 229
GVD V I P T++YN + E A E+HH L
Sbjct: 68 IRLSQMNFGVD--VGIMP--LGSCTMKYNPKIEEKATAITESHHPL 109
>sp|C3N5G2|GCSPB_SULIA Probable glycine dehydrogenase [decarboxylating] subunit 2
OS=Sulfolobus islandicus (strain M.16.27) GN=gcvPB PE=3
SV=1
Length = 509
Score = 30.8 bits (68), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 47/106 (44%), Gaps = 7/106 (6%)
Query: 127 WGAKVVVQLGKREFIQAAVLLHPSFVTVDDIKGVEVPLSIL---GAEIDRLSPPALVKEF 183
W ++ +L + +L++ +IK +++P ++L G + LS +V+ F
Sbjct: 8 WDEPLIFELNNSGANRQGLLINKDDEIRSEIKEMKIPKNLLRENGPNLPSLSELEVVRHF 67
Query: 184 EEALNAKSGVDSFVKIFPKVAHGWTVRYNVEDETAVKAAEEAHHNL 229
GVD V I P T++YN + E A E+HH L
Sbjct: 68 IRLSQMNFGVD--VGIMP--LGSCTMKYNPKIEEKATAITESHHPL 109
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.136 0.414
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 96,268,299
Number of Sequences: 539616
Number of extensions: 4123833
Number of successful extensions: 10802
Number of sequences better than 100.0: 45
Number of HSP's better than 100.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 10747
Number of HSP's gapped (non-prelim): 47
length of query: 238
length of database: 191,569,459
effective HSP length: 114
effective length of query: 124
effective length of database: 130,053,235
effective search space: 16126601140
effective search space used: 16126601140
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 59 (27.3 bits)