Query 026476
Match_columns 238
No_of_seqs 153 out of 1693
Neff 10.0
Searched_HMMs 46136
Date Fri Mar 29 08:29:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026476.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/026476hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG3043 Predicted hydrolase re 100.0 1E-39 2.3E-44 243.5 21.8 238 1-238 1-242 (242)
2 PF01738 DLH: Dienelactone hyd 100.0 3.9E-34 8.4E-39 223.6 15.0 206 28-237 1-218 (218)
3 COG0412 Dienelactone hydrolase 100.0 2.2E-30 4.8E-35 203.3 21.8 210 26-237 12-234 (236)
4 COG1647 Esterase/lipase [Gener 99.9 4.8E-26 1E-30 170.2 15.7 176 38-234 14-242 (243)
5 COG1506 DAP2 Dipeptidyl aminop 99.9 4.6E-24 1E-28 189.4 18.4 198 27-238 377-618 (620)
6 PRK13604 luxD acyl transferase 99.9 9.4E-24 2E-28 169.3 18.3 170 28-209 22-247 (307)
7 PRK10566 esterase; Provisional 99.9 1.2E-23 2.5E-28 167.5 18.9 193 26-237 10-249 (249)
8 PHA02857 monoglyceride lipase; 99.9 5E-23 1.1E-27 166.3 20.6 191 28-237 13-274 (276)
9 KOG1455 Lysophospholipase [Lip 99.9 1.8E-23 3.9E-28 163.8 16.2 193 28-236 40-312 (313)
10 PLN02385 hydrolase; alpha/beta 99.9 1.7E-22 3.8E-27 168.5 22.1 194 28-237 74-346 (349)
11 PLN02298 hydrolase, alpha/beta 99.9 2.2E-22 4.8E-27 166.7 21.9 201 21-237 36-318 (330)
12 PRK10749 lysophospholipase L2; 99.9 2E-22 4.4E-27 166.9 18.5 207 19-236 32-329 (330)
13 PF00326 Peptidase_S9: Prolyl 99.9 5.3E-23 1.2E-27 160.1 13.6 168 57-238 4-211 (213)
14 PLN02652 hydrolase; alpha/beta 99.9 6.5E-22 1.4E-26 166.6 18.5 190 28-237 123-388 (395)
15 PF12695 Abhydrolase_5: Alpha/ 99.9 1.4E-21 3E-26 142.7 12.7 142 41-206 1-145 (145)
16 PRK05077 frsA fermentation/res 99.9 1.1E-20 2.5E-25 160.2 20.1 183 27-238 180-414 (414)
17 COG2267 PldB Lysophospholipase 99.9 1.8E-20 4E-25 152.2 19.9 201 19-237 11-295 (298)
18 PLN02824 hydrolase, alpha/beta 99.9 1.5E-20 3.4E-25 153.2 18.0 196 20-236 10-294 (294)
19 PRK11460 putative hydrolase; P 99.9 1.6E-20 3.6E-25 147.8 16.8 179 38-237 15-209 (232)
20 PRK00870 haloalkane dehalogena 99.9 1.4E-19 3.1E-24 148.1 19.9 195 19-236 20-301 (302)
21 TIGR03343 biphenyl_bphD 2-hydr 99.8 2.2E-19 4.9E-24 145.2 19.4 190 18-234 5-281 (282)
22 PRK10162 acetyl esterase; Prov 99.8 2.3E-19 4.9E-24 147.7 19.4 189 26-238 67-317 (318)
23 TIGR03100 hydr1_PEP hydrolase, 99.8 3E-19 6.4E-24 144.2 18.4 186 27-235 13-274 (274)
24 TIGR03056 bchO_mg_che_rel puta 99.8 5.4E-19 1.2E-23 142.4 19.6 190 18-234 6-278 (278)
25 TIGR02240 PHA_depoly_arom poly 99.8 3.2E-19 7E-24 144.1 16.5 187 21-236 5-266 (276)
26 TIGR01607 PST-A Plasmodium sub 99.8 5.5E-19 1.2E-23 146.3 16.0 191 28-234 10-331 (332)
27 TIGR03611 RutD pyrimidine util 99.8 6.3E-19 1.4E-23 139.9 15.4 171 37-234 11-256 (257)
28 PRK10673 acyl-CoA esterase; Pr 99.8 1.2E-18 2.5E-23 139.0 16.6 170 38-236 15-255 (255)
29 PRK03592 haloalkane dehalogena 99.8 4.6E-18 9.9E-23 138.7 19.9 188 21-236 10-289 (295)
30 PLN02965 Probable pheophorbida 99.8 4.3E-18 9.4E-23 136.0 17.6 169 41-235 5-252 (255)
31 PRK10349 carboxylesterase BioH 99.8 2.1E-18 4.6E-23 137.8 15.4 162 40-234 14-254 (256)
32 PF02230 Abhydrolase_2: Phosph 99.8 1.4E-18 3E-23 135.5 13.8 188 33-237 7-216 (216)
33 KOG4391 Predicted alpha/beta h 99.8 1.6E-18 3.5E-23 129.5 13.1 185 27-237 66-283 (300)
34 PLN02679 hydrolase, alpha/beta 99.8 9.3E-18 2E-22 140.6 19.2 174 39-235 88-356 (360)
35 TIGR01836 PHA_synth_III_C poly 99.8 1E-17 2.2E-22 139.9 19.2 196 19-236 38-350 (350)
36 KOG2984 Predicted hydrolase [G 99.8 8E-19 1.7E-23 129.7 10.6 203 11-236 14-276 (277)
37 PF05448 AXE1: Acetyl xylan es 99.8 2.3E-18 4.9E-23 140.9 14.2 189 28-236 69-320 (320)
38 TIGR02427 protocat_pcaD 3-oxoa 99.8 5.9E-18 1.3E-22 133.4 15.5 168 38-233 12-250 (251)
39 TIGR01738 bioH putative pimelo 99.8 4E-18 8.7E-23 134.0 14.1 161 40-233 5-245 (245)
40 PRK10985 putative hydrolase; P 99.8 1.4E-17 2.9E-22 137.7 17.7 182 38-237 57-321 (324)
41 TIGR02821 fghA_ester_D S-formy 99.8 4.2E-17 9.1E-22 131.7 20.0 196 28-237 27-275 (275)
42 TIGR01250 pro_imino_pep_2 prol 99.8 5.1E-17 1.1E-21 130.8 18.6 173 38-234 24-288 (288)
43 COG0429 Predicted hydrolase of 99.8 1.6E-17 3.4E-22 132.2 14.9 185 35-237 70-341 (345)
44 KOG1552 Predicted alpha/beta h 99.8 2.6E-17 5.6E-22 126.9 15.6 181 28-235 48-251 (258)
45 PLN02511 hydrolase 99.8 1.5E-17 3.3E-22 140.4 15.7 182 38-236 99-365 (388)
46 PLN02442 S-formylglutathione h 99.8 9.6E-17 2.1E-21 130.1 19.5 199 27-238 31-282 (283)
47 PRK14875 acetoin dehydrogenase 99.8 4.6E-17 9.9E-22 136.8 17.9 182 24-236 115-371 (371)
48 PRK06489 hypothetical protein; 99.8 1.6E-17 3.4E-22 139.2 14.7 193 25-238 47-359 (360)
49 COG2945 Predicted hydrolase of 99.8 2.2E-17 4.7E-22 121.4 13.3 170 38-234 27-205 (210)
50 KOG4178 Soluble epoxide hydrol 99.8 8.3E-17 1.8E-21 128.3 17.5 195 19-236 23-320 (322)
51 PRK11126 2-succinyl-6-hydroxy- 99.7 6.9E-17 1.5E-21 127.8 16.0 161 39-235 2-241 (242)
52 PRK03204 haloalkane dehalogena 99.7 1.4E-16 3.1E-21 129.4 18.1 186 19-233 15-285 (286)
53 TIGR03695 menH_SHCHC 2-succiny 99.7 5.3E-17 1.2E-21 127.6 15.0 167 40-233 2-250 (251)
54 PLN03087 BODYGUARD 1 domain co 99.7 1.6E-16 3.5E-21 136.1 18.8 186 26-235 184-478 (481)
55 PLN02578 hydrolase 99.7 2.5E-16 5.5E-21 131.7 19.1 181 24-234 72-353 (354)
56 PLN02211 methyl indole-3-aceta 99.7 4.1E-16 9E-21 125.8 18.7 166 27-209 6-253 (273)
57 PRK11071 esterase YqiA; Provis 99.7 2.1E-16 4.5E-21 120.6 15.4 151 40-234 2-189 (190)
58 PRK10115 protease 2; Provision 99.7 3.6E-16 7.8E-21 140.2 19.3 172 28-207 429-654 (686)
59 PLN00021 chlorophyllase 99.7 8.2E-16 1.8E-20 125.7 19.6 191 27-237 38-284 (313)
60 PLN02872 triacylglycerol lipas 99.7 6.4E-17 1.4E-21 136.0 13.1 185 39-237 74-390 (395)
61 PF12697 Abhydrolase_6: Alpha/ 99.7 6.2E-17 1.3E-21 125.4 12.2 152 42-209 1-219 (228)
62 TIGR01840 esterase_phb esteras 99.7 2E-16 4.2E-21 123.1 14.4 153 31-189 2-196 (212)
63 PRK07581 hypothetical protein; 99.7 1E-16 2.2E-21 133.3 13.5 183 39-237 40-337 (339)
64 PF06500 DUF1100: Alpha/beta h 99.7 2E-16 4.2E-21 131.1 14.8 181 27-237 176-410 (411)
65 PRK08775 homoserine O-acetyltr 99.7 5.2E-17 1.1E-21 135.3 11.5 184 26-236 44-339 (343)
66 PLN03084 alpha/beta hydrolase 99.7 5.9E-16 1.3E-20 129.9 16.8 186 24-234 111-382 (383)
67 PLN02894 hydrolase, alpha/beta 99.7 1.8E-15 4E-20 128.3 19.3 103 36-147 102-207 (402)
68 COG3458 Acetyl esterase (deace 99.7 2.1E-16 4.5E-21 122.0 11.5 175 28-209 69-303 (321)
69 PF08840 BAAT_C: BAAT / Acyl-C 99.7 4.1E-16 9E-21 121.0 12.7 135 103-238 4-212 (213)
70 COG0657 Aes Esterase/lipase [L 99.7 5.1E-15 1.1E-19 121.8 19.8 184 28-237 64-311 (312)
71 COG0400 Predicted esterase [Ge 99.7 8.6E-16 1.9E-20 117.5 13.7 177 39-237 18-206 (207)
72 TIGR01249 pro_imino_pep_1 prol 99.7 3.4E-15 7.3E-20 122.5 17.6 186 22-236 9-305 (306)
73 TIGR01392 homoserO_Ac_trn homo 99.7 1.2E-15 2.6E-20 127.5 12.3 65 159-234 286-351 (351)
74 KOG1515 Arylacetamide deacetyl 99.7 6.1E-14 1.3E-18 114.7 21.9 190 24-236 70-335 (336)
75 KOG1454 Predicted hydrolase/ac 99.7 7.3E-15 1.6E-19 120.8 16.1 175 38-237 57-325 (326)
76 KOG1838 Alpha/beta hydrolase [ 99.6 1.5E-14 3.3E-19 119.2 16.6 179 38-235 124-387 (409)
77 COG3571 Predicted hydrolase of 99.6 6.7E-14 1.4E-18 100.1 16.7 194 30-235 4-210 (213)
78 TIGR01838 PHA_synth_I poly(R)- 99.6 2.5E-14 5.5E-19 123.8 17.5 167 26-208 172-457 (532)
79 KOG4667 Predicted esterase [Li 99.6 1E-14 2.2E-19 109.2 12.8 159 38-209 32-242 (269)
80 PRK05855 short chain dehydroge 99.6 7.2E-15 1.6E-19 130.4 14.4 107 21-137 6-113 (582)
81 PRK00175 metX homoserine O-ace 99.6 1.2E-14 2.6E-19 122.6 14.6 68 158-236 306-374 (379)
82 KOG2281 Dipeptidyl aminopeptid 99.6 4.5E-14 9.8E-19 120.4 16.9 193 28-235 626-866 (867)
83 TIGR03101 hydr2_PEP hydrolase, 99.6 8.6E-14 1.9E-18 111.1 17.3 172 26-209 10-247 (266)
84 KOG2100 Dipeptidyl aminopeptid 99.6 3.6E-14 7.9E-19 128.0 16.0 185 39-237 526-748 (755)
85 PLN02980 2-oxoglutarate decarb 99.6 3.7E-14 8E-19 137.6 16.1 181 39-236 1371-1639(1655)
86 PF07859 Abhydrolase_3: alpha/ 99.6 1.1E-14 2.4E-19 113.0 10.1 148 42-208 1-210 (211)
87 PRK07868 acyl-CoA synthetase; 99.6 1.4E-13 2.9E-18 129.0 18.6 191 24-236 45-361 (994)
88 PF03403 PAF-AH_p_II: Platelet 99.6 5.8E-14 1.3E-18 117.6 14.3 197 37-238 98-360 (379)
89 PRK05371 x-prolyl-dipeptidyl a 99.5 1.5E-13 3.3E-18 124.3 15.6 161 58-238 270-521 (767)
90 PF12715 Abhydrolase_7: Abhydr 99.5 1.3E-14 2.8E-19 118.5 7.1 176 28-209 101-349 (390)
91 KOG2382 Predicted alpha/beta h 99.5 2.3E-13 5E-18 108.7 13.9 175 38-237 51-314 (315)
92 KOG4409 Predicted hydrolase/ac 99.5 3.8E-13 8.2E-18 108.0 14.7 121 21-151 68-195 (365)
93 COG4757 Predicted alpha/beta h 99.5 9.4E-13 2E-17 99.8 13.6 185 28-233 18-280 (281)
94 TIGR01839 PHA_synth_II poly(R) 99.5 1.6E-12 3.4E-17 112.0 16.1 171 20-206 192-481 (560)
95 PF12740 Chlorophyllase2: Chlo 99.5 8.2E-12 1.8E-16 98.0 17.9 189 30-238 6-252 (259)
96 TIGR00976 /NonD putative hydro 99.5 1.7E-12 3.6E-17 114.6 15.9 111 28-147 9-128 (550)
97 PF02129 Peptidase_S15: X-Pro 99.5 2.9E-12 6.3E-17 103.4 14.8 132 63-206 53-271 (272)
98 KOG3847 Phospholipase A2 (plat 99.4 5.4E-12 1.2E-16 99.7 13.7 193 39-237 118-372 (399)
99 PF02273 Acyl_transf_2: Acyl t 99.4 5E-12 1.1E-16 96.7 11.9 171 28-208 15-239 (294)
100 KOG2564 Predicted acetyltransf 99.4 1.1E-11 2.3E-16 96.7 12.6 113 27-147 61-178 (343)
101 COG3208 GrsT Predicted thioest 99.4 3.4E-11 7.4E-16 92.6 14.6 166 37-234 5-234 (244)
102 PRK06765 homoserine O-acetyltr 99.4 7.6E-12 1.7E-16 105.4 11.8 66 159-235 321-387 (389)
103 PF00561 Abhydrolase_1: alpha/ 99.4 2.7E-12 5.9E-17 100.1 8.4 129 68-209 1-218 (230)
104 TIGR01849 PHB_depoly_PhaZ poly 99.4 4E-11 8.6E-16 100.5 15.6 188 28-236 86-406 (406)
105 PF05728 UPF0227: Uncharacteri 99.4 1.8E-11 3.9E-16 92.6 12.2 149 42-233 2-186 (187)
106 PF08538 DUF1749: Protein of u 99.3 1.3E-11 2.9E-16 98.6 11.2 187 28-234 20-303 (303)
107 PF06821 Ser_hydrolase: Serine 99.3 3.4E-11 7.5E-16 90.0 12.6 136 42-209 1-156 (171)
108 KOG2112 Lysophospholipase [Lip 99.3 6.4E-11 1.4E-15 88.9 13.0 179 40-235 4-203 (206)
109 PF07224 Chlorophyllase: Chlor 99.3 1.3E-10 2.7E-15 90.1 14.8 163 28-210 33-234 (307)
110 COG4188 Predicted dienelactone 99.3 2.4E-11 5.1E-16 99.0 11.1 158 41-208 72-296 (365)
111 PF03583 LIP: Secretory lipase 99.3 8.1E-11 1.8E-15 95.6 12.8 63 161-237 219-282 (290)
112 PF03959 FSH1: Serine hydrolas 99.3 2.7E-11 5.8E-16 94.2 8.5 165 38-208 3-203 (212)
113 PF10503 Esterase_phd: Esteras 99.2 3.3E-10 7.1E-15 87.8 13.6 145 38-188 15-196 (220)
114 COG3509 LpqC Poly(3-hydroxybut 99.2 1E-10 2.2E-15 92.2 10.1 129 18-151 36-179 (312)
115 PF06057 VirJ: Bacterial virul 99.2 2.2E-10 4.7E-15 85.5 11.2 159 40-234 3-190 (192)
116 KOG2624 Triglyceride lipase-ch 99.2 1.4E-09 2.9E-14 91.2 15.6 111 37-149 71-197 (403)
117 COG3243 PhaC Poly(3-hydroxyalk 99.2 5.2E-10 1.1E-14 92.3 12.6 163 28-206 93-370 (445)
118 PF06342 DUF1057: Alpha/beta h 99.2 3.9E-09 8.3E-14 83.1 16.7 138 40-187 36-238 (297)
119 KOG4627 Kynurenine formamidase 99.2 5.8E-11 1.2E-15 88.6 5.9 155 33-207 61-248 (270)
120 KOG2551 Phospholipase/carboxyh 99.1 3.7E-09 8.1E-14 80.1 13.7 179 38-236 4-220 (230)
121 PRK10439 enterobactin/ferric e 99.1 1.5E-08 3.2E-13 86.1 18.7 183 28-234 194-407 (411)
122 COG4099 Predicted peptidase [G 99.1 6.3E-10 1.4E-14 87.6 8.1 85 116-201 267-354 (387)
123 cd00707 Pancreat_lipase_like P 99.0 1.4E-09 3.1E-14 87.8 9.1 107 38-152 35-148 (275)
124 PF10230 DUF2305: Uncharacteri 99.0 9.7E-09 2.1E-13 82.5 13.1 164 39-207 2-265 (266)
125 PF09752 DUF2048: Uncharacteri 99.0 2.2E-08 4.8E-13 81.5 14.3 162 39-208 92-330 (348)
126 TIGR03502 lipase_Pla1_cef extr 99.0 1.3E-09 2.9E-14 97.9 7.9 96 39-136 449-573 (792)
127 PRK04940 hypothetical protein; 98.9 2.2E-08 4.8E-13 74.6 10.8 97 118-235 60-179 (180)
128 KOG3101 Esterase D [General fu 98.9 1.2E-08 2.5E-13 76.7 9.3 94 116-209 139-264 (283)
129 KOG3253 Predicted alpha/beta h 98.9 4.1E-08 8.9E-13 84.2 13.6 92 116-211 248-350 (784)
130 PF00975 Thioesterase: Thioest 98.9 4E-08 8.8E-13 77.0 12.1 169 40-233 1-229 (229)
131 TIGR03230 lipo_lipase lipoprot 98.9 2.6E-08 5.6E-13 84.6 11.6 107 38-152 40-155 (442)
132 PF06028 DUF915: Alpha/beta hy 98.9 1.4E-08 3E-13 80.6 8.6 183 38-233 10-252 (255)
133 COG0596 MhpC Predicted hydrola 98.8 4.9E-07 1.1E-11 70.7 17.2 95 39-147 21-119 (282)
134 PF12146 Hydrolase_4: Putative 98.8 1.4E-08 3.1E-13 65.8 6.5 74 28-109 4-78 (79)
135 KOG3975 Uncharacterized conser 98.8 4.7E-07 1E-11 69.9 14.8 183 23-212 13-289 (301)
136 COG2021 MET2 Homoserine acetyl 98.8 1.7E-07 3.8E-12 76.5 12.7 65 157-235 302-367 (368)
137 PF05705 DUF829: Eukaryotic pr 98.7 7.7E-07 1.7E-11 70.5 14.9 168 41-233 1-240 (240)
138 PF12048 DUF3530: Protein of u 98.7 2.3E-06 4.9E-11 70.2 17.6 184 40-236 88-309 (310)
139 COG3545 Predicted esterase of 98.7 2.5E-06 5.3E-11 62.7 14.9 106 117-235 58-178 (181)
140 COG1505 Serine proteases of th 98.7 5.9E-07 1.3E-11 77.4 13.0 195 28-238 407-648 (648)
141 COG2936 Predicted acyl esteras 98.7 6.1E-07 1.3E-11 77.7 13.2 111 28-147 32-155 (563)
142 PF10142 PhoPQ_related: PhoPQ- 98.6 3.6E-06 7.7E-11 70.0 16.7 104 116-236 170-320 (367)
143 PF00756 Esterase: Putative es 98.6 1.3E-07 2.8E-12 75.3 7.7 113 107-233 101-251 (251)
144 PF01674 Lipase_2: Lipase (cla 98.6 8.8E-08 1.9E-12 74.2 6.0 88 40-136 2-93 (219)
145 PF07819 PGAP1: PGAP1-like pro 98.6 4.5E-07 9.7E-12 71.0 9.1 102 38-151 3-123 (225)
146 cd00312 Esterase_lipase Estera 98.4 1.3E-06 2.8E-11 76.5 8.7 112 28-150 79-212 (493)
147 COG0627 Predicted esterase [Ge 98.4 5.2E-06 1.1E-10 68.0 11.5 106 119-237 153-312 (316)
148 COG1073 Hydrolases of the alph 98.4 5.1E-06 1.1E-10 67.1 11.3 200 28-238 33-299 (299)
149 PF10340 DUF2424: Protein of u 98.4 2.7E-05 5.9E-10 64.7 15.1 112 27-150 105-234 (374)
150 PF11339 DUF3141: Protein of u 98.4 5.5E-06 1.2E-10 70.6 11.1 54 157-211 293-354 (581)
151 COG3150 Predicted esterase [Ge 98.3 1.1E-05 2.3E-10 58.8 10.1 98 116-234 57-187 (191)
152 COG3946 VirJ Type IV secretory 98.3 2.5E-05 5.4E-10 64.6 13.5 83 38-134 259-342 (456)
153 COG4814 Uncharacterized protei 98.3 3.4E-05 7.3E-10 60.0 13.1 182 40-235 46-286 (288)
154 COG2382 Fes Enterochelin ester 98.3 6.7E-05 1.4E-09 60.1 14.8 169 26-208 80-282 (299)
155 COG2272 PnbA Carboxylesterase 98.3 4.2E-06 9.1E-11 71.0 8.2 118 28-151 80-217 (491)
156 PF00135 COesterase: Carboxyle 98.2 8.4E-06 1.8E-10 71.9 9.6 107 39-151 125-245 (535)
157 PLN02733 phosphatidylcholine-s 98.2 7.1E-06 1.5E-10 70.2 8.2 88 54-152 108-202 (440)
158 COG1770 PtrB Protease II [Amin 98.2 1.6E-05 3.4E-10 69.6 10.1 167 37-207 446-657 (682)
159 PF00151 Lipase: Lipase; Inte 98.2 9.4E-06 2E-10 67.1 8.2 127 38-172 70-215 (331)
160 PF05677 DUF818: Chlamydia CHL 98.1 3.2E-05 6.9E-10 62.9 10.3 100 28-138 124-235 (365)
161 KOG2237 Predicted serine prote 98.1 1.9E-05 4.2E-10 68.7 9.0 178 28-209 454-686 (712)
162 PRK10252 entF enterobactin syn 98.0 7.3E-05 1.6E-09 72.9 11.5 96 38-147 1067-1167(1296)
163 PF05990 DUF900: Alpha/beta hy 98.0 5.1E-05 1.1E-09 59.8 8.6 131 38-175 17-167 (233)
164 COG2819 Predicted hydrolase of 97.9 0.0011 2.3E-08 52.5 14.6 106 116-234 135-259 (264)
165 COG3319 Thioesterase domains o 97.9 4.9E-05 1.1E-09 60.4 7.0 96 40-150 1-102 (257)
166 KOG1553 Predicted alpha/beta h 97.8 2.2E-05 4.9E-10 63.6 4.5 124 40-178 244-400 (517)
167 KOG4840 Predicted hydrolases o 97.8 0.0015 3.3E-08 50.1 13.2 94 41-147 37-140 (299)
168 PF11144 DUF2920: Protein of u 97.8 0.0028 6E-08 53.2 15.8 37 163-200 295-331 (403)
169 COG4782 Uncharacterized protei 97.6 0.00039 8.5E-09 57.1 8.7 106 39-151 116-234 (377)
170 PF05057 DUF676: Putative seri 97.6 0.00019 4.2E-09 55.9 6.1 27 38-65 3-29 (217)
171 PF08386 Abhydrolase_4: TAP-li 97.4 0.00065 1.4E-08 46.4 6.3 61 160-235 33-93 (103)
172 COG1075 LipA Predicted acetylt 97.4 0.00052 1.1E-08 57.1 6.7 96 39-149 59-162 (336)
173 KOG4388 Hormone-sensitive lipa 97.4 0.0039 8.4E-08 54.3 11.6 47 162-211 788-834 (880)
174 PF03096 Ndr: Ndr family; Int 97.3 0.0061 1.3E-07 49.0 11.7 188 24-234 7-277 (283)
175 KOG2541 Palmitoyl protein thio 97.3 0.0016 3.4E-08 51.4 7.7 99 40-150 24-127 (296)
176 PF07082 DUF1350: Protein of u 97.3 0.0091 2E-07 46.9 11.8 160 30-208 8-206 (250)
177 KOG3724 Negative regulator of 97.1 0.0016 3.4E-08 58.5 6.8 87 39-137 89-201 (973)
178 PF02089 Palm_thioest: Palmito 97.1 0.0047 1E-07 49.5 8.9 104 39-150 5-115 (279)
179 PF05577 Peptidase_S28: Serine 97.1 0.002 4.4E-08 55.6 7.3 110 40-151 29-148 (434)
180 cd00741 Lipase Lipase. Lipase 97.0 0.0032 7E-08 46.1 6.7 73 103-175 12-97 (153)
181 KOG1551 Uncharacterized conser 96.9 0.0044 9.4E-08 48.9 6.9 39 164-208 309-347 (371)
182 KOG2931 Differentiation-relate 96.9 0.095 2.1E-06 42.2 14.4 115 24-149 30-155 (326)
183 PLN02633 palmitoyl protein thi 96.9 0.0083 1.8E-07 48.7 8.6 104 35-150 21-130 (314)
184 KOG1516 Carboxylesterase and r 96.8 0.0069 1.5E-07 53.9 8.7 103 28-138 97-215 (545)
185 PF02450 LCAT: Lecithin:choles 96.8 0.0033 7.1E-08 53.5 6.2 84 55-154 66-163 (389)
186 COG4287 PqaA PhoPQ-activated p 96.8 0.0021 4.6E-08 52.9 4.6 90 116-209 232-373 (507)
187 PLN02606 palmitoyl-protein thi 96.7 0.012 2.5E-07 47.8 8.1 100 38-149 25-130 (306)
188 PF06259 Abhydrolase_8: Alpha/ 96.6 0.0087 1.9E-07 44.9 6.7 75 101-175 90-171 (177)
189 KOG2521 Uncharacterized conser 96.6 0.074 1.6E-06 44.2 12.5 177 39-236 38-290 (350)
190 PTZ00472 serine carboxypeptida 96.3 0.017 3.8E-07 50.2 7.8 91 38-136 76-189 (462)
191 COG4947 Uncharacterized protei 96.2 0.052 1.1E-06 40.1 8.5 99 106-207 88-216 (227)
192 PF04301 DUF452: Protein of un 96.2 0.027 5.8E-07 43.6 7.4 37 116-152 55-91 (213)
193 PF01764 Lipase_3: Lipase (cla 96.2 0.0058 1.3E-07 43.8 3.6 33 104-136 49-82 (140)
194 KOG2565 Predicted hydrolases o 96.2 0.026 5.6E-07 46.8 7.5 103 24-137 130-248 (469)
195 PF11187 DUF2974: Protein of u 96.1 0.0099 2.1E-07 46.5 4.8 38 116-153 82-125 (224)
196 PF05576 Peptidase_S37: PS-10 96.0 0.11 2.5E-06 43.8 10.6 52 96-147 112-165 (448)
197 KOG2183 Prolylcarboxypeptidase 95.8 0.021 4.5E-07 48.0 5.4 99 40-141 81-191 (492)
198 cd00519 Lipase_3 Lipase (class 95.7 0.031 6.7E-07 43.8 5.8 72 103-174 112-194 (229)
199 PLN02517 phosphatidylcholine-s 95.5 0.028 6E-07 49.7 5.3 89 56-152 158-264 (642)
200 smart00824 PKS_TE Thioesterase 95.5 0.041 8.8E-07 41.8 5.8 80 54-147 13-98 (212)
201 PF01083 Cutinase: Cutinase; 95.1 0.054 1.2E-06 40.9 5.3 74 102-175 64-149 (179)
202 PF11288 DUF3089: Protein of u 94.6 0.05 1.1E-06 41.8 3.8 38 100-137 75-114 (207)
203 PLN02454 triacylglycerol lipas 94.5 0.036 7.8E-07 47.0 3.3 36 101-136 208-246 (414)
204 PLN02310 triacylglycerol lipas 94.3 0.031 6.8E-07 47.3 2.4 61 118-178 209-281 (405)
205 KOG4540 Putative lipase essent 94.2 0.096 2.1E-06 42.0 4.8 47 99-145 256-303 (425)
206 COG5153 CVT17 Putative lipase 94.2 0.096 2.1E-06 42.0 4.8 47 99-145 256-303 (425)
207 PF06850 PHB_depo_C: PHB de-po 94.0 0.15 3.3E-06 38.6 5.3 86 141-236 116-202 (202)
208 COG4553 DepA Poly-beta-hydroxy 94.0 0.86 1.9E-05 36.9 9.6 68 161-236 339-407 (415)
209 PLN03037 lipase class 3 family 93.9 0.039 8.4E-07 48.0 2.2 78 102-179 301-392 (525)
210 KOG2369 Lecithin:cholesterol a 93.9 0.13 2.7E-06 44.2 5.2 86 55-153 125-227 (473)
211 PLN00413 triacylglycerol lipas 93.1 0.11 2.5E-06 44.7 3.7 40 116-155 282-331 (479)
212 PLN02408 phospholipase A1 92.8 0.12 2.5E-06 43.3 3.4 57 118-174 200-267 (365)
213 PLN02571 triacylglycerol lipas 92.7 0.11 2.4E-06 44.1 3.2 18 119-136 227-244 (413)
214 PLN02162 triacylglycerol lipas 92.7 0.13 2.7E-06 44.3 3.4 40 116-155 276-325 (475)
215 KOG4372 Predicted alpha/beta h 92.5 0.28 6.1E-06 41.3 5.2 87 38-135 79-167 (405)
216 PLN02934 triacylglycerol lipas 92.3 0.16 3.4E-06 44.3 3.6 52 105-156 307-369 (515)
217 PLN02324 triacylglycerol lipas 92.0 0.15 3.3E-06 43.3 3.2 19 118-136 215-233 (415)
218 PLN02719 triacylglycerol lipas 91.8 0.17 3.7E-06 44.1 3.3 19 118-136 298-316 (518)
219 PLN02847 triacylglycerol lipas 91.8 0.46 1E-05 42.2 5.8 70 116-187 249-329 (633)
220 PF07519 Tannase: Tannase and 91.4 0.78 1.7E-05 40.2 7.0 123 62-187 54-186 (474)
221 PLN02753 triacylglycerol lipas 91.3 0.21 4.5E-06 43.7 3.3 19 118-136 312-330 (531)
222 PF03283 PAE: Pectinacetyleste 91.3 1.8 3.8E-05 36.6 8.7 35 102-136 137-174 (361)
223 PLN02802 triacylglycerol lipas 91.2 0.22 4.7E-06 43.4 3.3 19 118-136 330-348 (509)
224 PF07519 Tannase: Tannase and 91.1 0.51 1.1E-05 41.4 5.6 71 157-235 349-426 (474)
225 PLN02761 lipase class 3 family 91.1 0.15 3.2E-06 44.5 2.2 19 118-136 294-312 (527)
226 KOG4569 Predicted lipase [Lipi 89.7 0.35 7.7E-06 40.3 3.3 49 104-152 156-213 (336)
227 KOG3967 Uncharacterized conser 89.5 3.8 8.3E-05 31.7 8.3 35 116-150 188-226 (297)
228 KOG2182 Hydrolytic enzymes of 86.1 3.9 8.4E-05 35.7 7.2 86 63-150 113-206 (514)
229 PF05277 DUF726: Protein of un 84.0 3.1 6.7E-05 34.8 5.7 60 116-175 218-289 (345)
230 PF09994 DUF2235: Uncharacteri 83.7 7.4 0.00016 31.5 7.8 36 101-136 73-110 (277)
231 PF04083 Abhydro_lipase: Parti 81.2 2.8 6.1E-05 25.6 3.4 15 38-52 42-56 (63)
232 KOG2029 Uncharacterized conser 80.8 3.3 7.1E-05 36.9 4.9 35 102-136 507-544 (697)
233 PF08237 PE-PPE: PE-PPE domain 80.4 2.5 5.4E-05 33.2 3.7 21 116-136 46-66 (225)
234 TIGR03712 acc_sec_asp2 accesso 79.9 42 0.00091 29.6 12.2 107 30-147 279-386 (511)
235 PF06309 Torsin: Torsin; Inte 77.7 1.8 3.9E-05 30.5 2.0 43 27-69 40-83 (127)
236 PF10605 3HBOH: 3HB-oligomer h 72.5 8.6 0.00019 34.6 5.1 75 161-235 555-636 (690)
237 PF06441 EHN: Epoxide hydrolas 72.4 5.8 0.00013 27.4 3.4 30 23-52 73-105 (112)
238 PF12242 Eno-Rase_NADH_b: NAD( 67.6 9.6 0.00021 24.3 3.3 36 101-136 19-58 (78)
239 COG3673 Uncharacterized conser 63.4 11 0.00024 31.2 3.8 36 101-136 103-140 (423)
240 COG2185 Sbm Methylmalonyl-CoA 62.1 58 0.0013 23.6 8.3 94 37-156 10-107 (143)
241 KOG1202 Animal-type fatty acid 60.1 31 0.00067 34.2 6.4 91 38-150 2122-2218(2376)
242 COG4822 CbiK Cobalamin biosynt 59.4 64 0.0014 25.2 7.0 56 40-119 139-195 (265)
243 TIGR02884 spore_pdaA delta-lac 58.7 13 0.00029 29.0 3.5 35 40-74 187-221 (224)
244 PF00450 Peptidase_S10: Serine 57.7 10 0.00022 32.4 2.9 90 38-136 39-154 (415)
245 KOG2170 ATPase of the AAA+ sup 56.8 12 0.00027 30.7 3.0 48 27-74 97-145 (344)
246 TIGR02690 resist_ArsH arsenica 56.5 36 0.00077 26.6 5.4 26 105-131 109-141 (219)
247 PF06500 DUF1100: Alpha/beta h 55.2 7.1 0.00015 33.5 1.5 68 159-235 187-254 (411)
248 PF00698 Acyl_transf_1: Acyl t 53.1 11 0.00024 31.1 2.3 32 106-137 72-103 (318)
249 smart00827 PKS_AT Acyl transfe 52.5 16 0.00034 29.6 3.1 31 107-137 71-101 (298)
250 COG0529 CysC Adenylylsulfate k 51.4 1.1E+02 0.0023 23.4 7.3 38 38-75 21-59 (197)
251 COG0431 Predicted flavoprotein 51.3 39 0.00085 25.4 4.9 61 54-136 56-119 (184)
252 PTZ00445 p36-lilke protein; Pr 51.0 58 0.0013 25.4 5.7 93 54-152 29-144 (219)
253 PLN03016 sinapoylglucose-malat 49.2 26 0.00057 30.4 4.1 20 117-136 164-183 (433)
254 TIGR03131 malonate_mdcH malona 49.0 19 0.00041 29.2 3.1 29 108-136 66-94 (295)
255 TIGR02764 spore_ybaN_pdaB poly 47.8 19 0.0004 27.2 2.7 34 41-74 153-188 (191)
256 COG1647 Esterase/lipase [Gener 45.7 35 0.00075 26.8 3.8 47 157-209 11-57 (243)
257 PTZ00472 serine carboxypeptida 45.6 63 0.0014 28.4 5.9 27 161-187 364-390 (462)
258 COG0505 CarA Carbamoylphosphat 45.6 1E+02 0.0022 26.1 6.6 73 57-137 191-268 (368)
259 PHA02519 plasmid partition pro 45.6 31 0.00067 29.5 3.9 36 39-75 105-143 (387)
260 PF06792 UPF0261: Uncharacteri 45.4 1.4E+02 0.003 25.8 7.6 94 43-137 4-114 (403)
261 KOG4389 Acetylcholinesterase/B 44.4 1E+02 0.0022 27.4 6.7 47 103-149 197-253 (601)
262 COG2830 Uncharacterized protei 44.2 7.5 0.00016 28.8 -0.0 37 118-154 57-93 (214)
263 cd02067 B12-binding B12 bindin 43.6 1E+02 0.0022 21.0 8.1 20 55-74 15-34 (119)
264 COG3340 PepE Peptidase E [Amin 43.5 84 0.0018 24.5 5.5 38 38-75 31-70 (224)
265 KOG2385 Uncharacterized conser 42.5 28 0.00061 30.8 3.1 38 115-152 444-488 (633)
266 TIGR00128 fabD malonyl CoA-acy 41.8 28 0.00061 28.0 3.0 28 109-136 73-101 (290)
267 cd03818 GT1_ExpC_like This fam 41.0 56 0.0012 27.6 4.9 31 42-75 2-32 (396)
268 PRK02399 hypothetical protein; 40.3 2.2E+02 0.0048 24.6 8.0 94 43-137 6-116 (406)
269 PF03853 YjeF_N: YjeF-related 39.5 39 0.00084 25.1 3.2 36 38-74 24-59 (169)
270 PF08250 Sperm_act_pep: Sperm- 38.8 8.2 0.00018 14.3 -0.3 6 124-129 1-6 (10)
271 PLN02213 sinapoylglucose-malat 38.6 70 0.0015 26.5 4.9 63 69-136 3-69 (319)
272 PRK10673 acyl-CoA esterase; Pr 37.9 1.9E+02 0.004 22.3 7.3 63 160-235 15-77 (255)
273 TIGR02873 spore_ylxY probable 37.7 38 0.00082 27.4 3.1 34 40-74 231-264 (268)
274 cd08194 Fe-ADH6 Iron-containin 37.5 1.9E+02 0.0042 24.5 7.5 64 41-124 25-88 (375)
275 cd07198 Patatin Patatin-like p 37.3 36 0.00079 25.1 2.8 31 107-137 15-45 (172)
276 PF01583 APS_kinase: Adenylyls 37.2 69 0.0015 23.5 4.1 36 40-75 2-38 (156)
277 PF13207 AAA_17: AAA domain; P 36.6 48 0.001 22.4 3.2 31 42-75 1-32 (121)
278 PF01656 CbiA: CobQ/CobB/MinD/ 36.4 56 0.0012 24.2 3.8 20 56-75 16-35 (195)
279 PLN02213 sinapoylglucose-malat 35.9 1.3E+02 0.0028 24.9 6.0 28 161-188 233-260 (319)
280 PLN03050 pyridoxine (pyridoxam 35.7 80 0.0017 25.1 4.6 34 40-74 61-94 (246)
281 PRK10279 hypothetical protein; 35.6 39 0.00086 27.8 2.9 32 106-137 21-52 (300)
282 PF10686 DUF2493: Protein of u 35.5 85 0.0018 19.6 3.8 32 39-73 31-63 (71)
283 PRK07877 hypothetical protein; 35.1 1.5E+02 0.0033 27.8 6.8 78 116-202 106-183 (722)
284 cd07207 Pat_ExoU_VipD_like Exo 34.8 49 0.0011 24.8 3.2 31 107-137 16-46 (194)
285 PRK13869 plasmid-partitioning 34.6 76 0.0017 27.3 4.6 37 41-79 122-161 (405)
286 COG5441 Uncharacterized conser 34.4 2.5E+02 0.0053 23.4 7.0 94 42-136 4-111 (401)
287 cd01983 Fer4_NifH The Fer4_Nif 34.0 77 0.0017 19.9 3.8 32 43-74 2-34 (99)
288 COG3233 Predicted deacetylase 34.0 2.3E+02 0.0051 22.2 7.4 36 40-75 4-44 (233)
289 TIGR00632 vsr DNA mismatch end 33.9 56 0.0012 22.8 3.0 17 57-73 97-113 (117)
290 COG0400 Predicted esterase [Ge 33.2 1.7E+02 0.0036 22.7 5.9 45 38-82 145-191 (207)
291 PLN03016 sinapoylglucose-malat 33.2 1.3E+02 0.0028 26.3 5.8 28 161-188 347-374 (433)
292 cd07225 Pat_PNPLA6_PNPLA7 Pata 32.6 48 0.001 27.4 3.0 61 54-137 2-62 (306)
293 PF10081 Abhydrolase_9: Alpha/ 32.6 2.8E+02 0.0061 22.7 8.0 34 117-150 108-146 (289)
294 PF04084 ORC2: Origin recognit 32.5 2.5E+02 0.0054 23.5 7.2 102 43-147 57-175 (326)
295 cd08551 Fe-ADH iron-containing 32.4 3E+02 0.0064 23.2 7.9 65 40-124 24-88 (370)
296 PRK13705 plasmid-partitioning 32.4 60 0.0013 27.8 3.6 35 40-75 106-143 (388)
297 PF07582 AP_endonuc_2_N: AP en 31.8 1.1E+02 0.0025 18.0 4.5 41 56-115 2-43 (55)
298 cd08189 Fe-ADH5 Iron-containin 31.8 2.6E+02 0.0057 23.7 7.4 65 40-124 27-91 (374)
299 KOG1209 1-Acyl dihydroxyaceton 31.4 1E+02 0.0022 24.3 4.3 35 39-75 6-40 (289)
300 cd07205 Pat_PNPLA6_PNPLA7_NTE1 30.7 67 0.0014 23.7 3.3 32 106-137 16-47 (175)
301 cd07210 Pat_hypo_W_succinogene 30.6 61 0.0013 25.2 3.1 31 107-137 17-47 (221)
302 COG3727 Vsr DNA G:T-mismatch r 30.2 1E+02 0.0022 22.1 3.7 16 58-73 99-114 (150)
303 cd05312 NAD_bind_1_malic_enz N 30.2 1.4E+02 0.003 24.4 5.1 71 57-134 42-122 (279)
304 cd08192 Fe-ADH7 Iron-containin 30.1 3.1E+02 0.0067 23.2 7.6 64 41-124 26-89 (370)
305 COG0552 FtsY Signal recognitio 30.0 1.2E+02 0.0027 25.4 4.8 39 37-75 136-175 (340)
306 COG1255 Uncharacterized protei 30.0 59 0.0013 22.7 2.5 22 54-75 23-44 (129)
307 cd08178 AAD_C C-terminal alcoh 29.8 2.1E+02 0.0045 24.5 6.5 64 41-124 23-86 (398)
308 COG2939 Carboxypeptidase C (ca 29.3 1E+02 0.0022 27.3 4.5 38 99-136 173-216 (498)
309 cd07209 Pat_hypo_Ecoli_Z1214_l 29.3 64 0.0014 24.9 3.1 32 107-138 15-46 (215)
310 cd08185 Fe-ADH1 Iron-containin 29.2 3.1E+02 0.0066 23.3 7.4 65 40-124 26-91 (380)
311 cd03413 CbiK_C Anaerobic cobal 29.0 1.8E+02 0.004 19.5 7.2 27 41-67 3-29 (103)
312 PF06180 CbiK: Cobalt chelatas 29.0 1.4E+02 0.0031 24.0 5.0 60 40-123 143-203 (262)
313 cd05014 SIS_Kpsf KpsF-like pro 28.9 1.7E+02 0.0037 20.0 5.0 31 43-74 3-33 (128)
314 PLN02209 serine carboxypeptida 28.7 85 0.0019 27.4 4.0 20 117-136 166-185 (437)
315 COG1087 GalE UDP-glucose 4-epi 28.4 1E+02 0.0022 25.6 4.0 31 43-76 3-33 (329)
316 COG1752 RssA Predicted esteras 28.3 58 0.0013 26.7 2.8 30 108-137 29-58 (306)
317 PF13200 DUF4015: Putative gly 28.2 1.9E+02 0.0041 24.1 5.7 62 54-117 13-75 (316)
318 KOG2585 Uncharacterized conser 28.1 1.3E+02 0.0028 26.2 4.7 37 38-75 265-301 (453)
319 PLN02209 serine carboxypeptida 28.1 1.7E+02 0.0038 25.5 5.8 28 161-188 351-378 (437)
320 KOG0780 Signal recognition par 28.0 1.2E+02 0.0026 26.2 4.5 43 34-76 95-140 (483)
321 cd07227 Pat_Fungal_NTE1 Fungal 27.9 66 0.0014 26.0 3.0 33 106-138 26-58 (269)
322 cd07228 Pat_NTE_like_bacteria 27.8 82 0.0018 23.3 3.3 31 107-137 17-47 (175)
323 cd08190 HOT Hydroxyacid-oxoaci 27.5 3.4E+02 0.0073 23.5 7.4 64 40-123 24-87 (414)
324 TIGR02638 lactal_redase lactal 27.5 3.2E+02 0.0069 23.2 7.2 64 41-124 31-94 (379)
325 TIGR01287 nifH nitrogenase iro 27.3 60 0.0013 26.0 2.7 24 55-79 16-39 (275)
326 KOG2941 Beta-1,4-mannosyltrans 27.2 1.4E+02 0.0029 25.4 4.6 39 37-76 11-49 (444)
327 PRK09860 putative alcohol dehy 27.2 3.5E+02 0.0075 23.1 7.4 64 41-124 33-96 (383)
328 PF09419 PGP_phosphatase: Mito 27.0 1.3E+02 0.0028 22.4 4.2 53 62-128 35-88 (168)
329 PF08643 DUF1776: Fungal famil 26.8 1.1E+02 0.0024 25.2 4.1 32 42-75 5-36 (299)
330 PHA03256 BDLF3; Provisional 26.8 36 0.00078 21.2 1.0 10 1-10 1-10 (77)
331 PHA02518 ParA-like protein; Pr 26.7 71 0.0015 24.1 2.9 31 47-79 10-40 (211)
332 PRK13230 nitrogenase reductase 26.6 49 0.0011 26.6 2.1 24 55-79 17-40 (279)
333 cd02037 MRP-like MRP (Multiple 26.4 69 0.0015 23.4 2.7 21 55-75 16-36 (169)
334 COG3494 Uncharacterized protei 26.3 2.3E+02 0.0049 22.9 5.5 58 57-124 18-76 (279)
335 PF14253 AbiH: Bacteriophage a 26.3 53 0.0012 26.1 2.2 15 116-130 233-247 (270)
336 PRK15454 ethanol dehydrogenase 26.1 3.7E+02 0.0081 23.1 7.4 64 41-124 51-114 (395)
337 PRK06490 glutamine amidotransf 26.0 3E+02 0.0066 21.7 6.4 92 40-136 9-103 (239)
338 KOG3170 Conserved phosducin-li 25.7 1.5E+02 0.0033 22.9 4.3 57 14-71 137-205 (240)
339 PRK06703 flavodoxin; Provision 25.7 1.8E+02 0.0038 20.8 4.7 35 41-75 4-38 (151)
340 TIGR01281 DPOR_bchL light-inde 25.6 54 0.0012 26.1 2.1 23 56-79 17-39 (268)
341 TIGR01378 thi_PPkinase thiamin 25.6 86 0.0019 24.1 3.1 38 97-135 67-104 (203)
342 PF02606 LpxK: Tetraacyldisacc 25.5 99 0.0021 25.8 3.7 33 47-82 46-78 (326)
343 KOG1969 DNA replication checkp 25.5 3.1E+02 0.0068 26.0 6.9 33 40-75 326-359 (877)
344 PF09989 DUF2229: CoA enzyme a 25.5 92 0.002 24.3 3.3 37 39-75 183-220 (221)
345 TIGR03453 partition_RepA plasm 25.1 1.1E+02 0.0024 26.1 4.0 24 55-79 121-144 (387)
346 PRK00652 lpxK tetraacyldisacch 25.1 1.3E+02 0.0028 25.1 4.3 34 46-82 59-92 (325)
347 PRK13185 chlL protochlorophyll 25.1 66 0.0014 25.6 2.6 24 55-79 18-41 (270)
348 PRK10037 cell division protein 25.0 54 0.0012 25.9 2.0 24 55-79 18-41 (250)
349 COG3640 CooC CO dehydrogenase 24.9 1.3E+02 0.0028 24.0 3.9 34 42-75 2-37 (255)
350 PRK05368 homoserine O-succinyl 24.8 84 0.0018 25.9 3.1 32 102-136 121-152 (302)
351 TIGR03709 PPK2_rel_1 polyphosp 24.8 97 0.0021 25.0 3.4 38 38-75 54-92 (264)
352 PRK10624 L-1,2-propanediol oxi 24.7 4.1E+02 0.0088 22.6 7.4 63 41-123 32-94 (382)
353 cd02032 Bchl_like This family 24.6 1.1E+02 0.0025 24.2 3.9 21 55-75 16-36 (267)
354 COG0331 FabD (acyl-carrier-pro 24.5 76 0.0016 26.3 2.8 30 108-137 73-104 (310)
355 cd02040 NifH NifH gene encodes 24.4 72 0.0016 25.3 2.7 25 54-79 16-40 (270)
356 PRK13235 nifH nitrogenase redu 24.4 53 0.0012 26.3 1.9 21 55-75 17-37 (274)
357 cd07224 Pat_like Patatin-like 24.4 77 0.0017 24.9 2.7 31 107-137 16-48 (233)
358 PF01872 RibD_C: RibD C-termin 24.0 1.9E+02 0.0041 21.8 4.8 39 103-144 121-159 (200)
359 cd08181 PPD-like 1,3-propanedi 23.5 4.5E+02 0.0097 22.1 7.5 65 40-124 26-91 (357)
360 PRK03094 hypothetical protein; 23.5 1E+02 0.0022 19.8 2.7 22 54-75 8-29 (80)
361 COG3007 Uncharacterized paraqu 23.2 1.1E+02 0.0023 25.3 3.3 34 103-136 22-60 (398)
362 cd08171 GlyDH-like2 Glycerol d 23.1 2.3E+02 0.005 23.7 5.5 64 40-124 23-86 (345)
363 PF00289 CPSase_L_chain: Carba 22.9 1.2E+02 0.0026 20.8 3.1 33 41-74 74-106 (110)
364 COG0426 FpaA Uncharacterized f 22.9 5E+02 0.011 22.4 7.8 36 40-75 248-283 (388)
365 cd02022 DPCK Dephospho-coenzym 22.8 1.1E+02 0.0025 22.6 3.3 32 42-76 1-32 (179)
366 PF00465 Fe-ADH: Iron-containi 22.7 1.9E+02 0.004 24.4 4.9 64 41-124 23-86 (366)
367 COG4874 Uncharacterized protei 22.6 2.4E+02 0.0052 22.5 5.0 28 56-84 59-86 (318)
368 CHL00072 chlL photochlorophyll 22.5 84 0.0018 25.6 2.7 21 55-75 16-36 (290)
369 PF03698 UPF0180: Uncharacteri 22.4 1.1E+02 0.0024 19.7 2.6 22 54-75 8-29 (80)
370 cd01819 Patatin_and_cPLA2 Pata 22.4 94 0.002 22.5 2.7 29 108-136 16-46 (155)
371 PF10566 Glyco_hydro_97: Glyco 22.3 3.7E+02 0.0079 21.9 6.2 68 52-128 30-97 (273)
372 cd08193 HVD 5-hydroxyvalerate 22.2 4.9E+02 0.011 22.1 7.6 65 40-124 27-91 (376)
373 PRK07053 glutamine amidotransf 22.2 3.9E+02 0.0085 21.0 6.6 90 42-136 5-100 (234)
374 COG0062 Uncharacterized conser 22.1 2.3E+02 0.0049 21.9 4.8 36 39-75 49-84 (203)
375 PF08484 Methyltransf_14: C-me 22.1 1.4E+02 0.0031 21.9 3.6 47 101-148 53-101 (160)
376 TIGR03371 cellulose_yhjQ cellu 22.1 1.4E+02 0.0031 23.1 3.9 24 55-79 18-41 (246)
377 cd02033 BchX Chlorophyllide re 22.0 2E+02 0.0043 24.1 4.8 36 40-75 31-67 (329)
378 TIGR01303 IMP_DH_rel_1 IMP deh 21.8 3.8E+02 0.0083 23.8 6.7 61 54-136 224-284 (475)
379 TIGR00682 lpxK tetraacyldisacc 21.7 1.4E+02 0.0029 24.8 3.8 33 47-82 39-71 (311)
380 cd08188 Fe-ADH4 Iron-containin 21.7 5E+02 0.011 22.0 7.5 65 40-124 29-93 (377)
381 PF09370 TIM-br_sig_trns: TIM- 21.4 1.1E+02 0.0023 24.8 2.9 93 107-204 2-119 (268)
382 PRK08105 flavodoxin; Provision 21.2 3.2E+02 0.007 19.6 5.5 34 42-75 4-38 (149)
383 PRK09004 FMN-binding protein M 21.2 3.2E+02 0.0069 19.6 5.3 34 42-75 5-38 (146)
384 cd04950 GT1_like_1 Glycosyltra 21.0 2E+02 0.0044 24.1 4.8 39 39-78 4-43 (373)
385 PRK05625 5-amino-6-(5-phosphor 20.9 2.6E+02 0.0056 21.5 5.1 43 103-148 127-169 (217)
386 cd07222 Pat_PNPLA4 Patatin-lik 20.8 1E+02 0.0022 24.5 2.8 31 107-137 16-50 (246)
387 cd02036 MinD Bacterial cell di 20.7 1.1E+02 0.0024 22.3 2.8 22 54-75 15-36 (179)
388 COG0084 TatD Mg-dependent DNas 20.7 2.6E+02 0.0056 22.5 5.1 51 101-151 15-67 (256)
389 cd02117 NifH_like This family 20.7 77 0.0017 24.3 2.1 23 56-79 17-39 (212)
390 COG1506 DAP2 Dipeptidyl aminop 20.6 3.3E+02 0.0071 25.0 6.3 62 39-114 551-615 (620)
391 KOG4530 Predicted flavoprotein 20.5 3E+02 0.0065 20.5 4.8 22 54-75 75-97 (199)
392 cd08179 NADPH_BDH NADPH-depend 20.4 4.7E+02 0.01 22.1 6.9 64 41-124 25-89 (375)
393 COG1564 THI80 Thiamine pyropho 20.3 1.3E+02 0.0029 23.4 3.2 37 98-135 73-109 (212)
394 TIGR00227 ribD_Cterm riboflavi 20.2 3E+02 0.0066 21.0 5.3 42 104-148 129-170 (216)
395 KOG0744 AAA+-type ATPase [Post 20.1 1.7E+02 0.0037 24.7 3.9 32 40-75 177-208 (423)
396 PF06564 YhjQ: YhjQ protein; 20.0 1.4E+02 0.0031 23.7 3.4 28 47-75 11-38 (243)
No 1
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=100.00 E-value=1e-39 Score=243.51 Aligned_cols=238 Identities=42% Similarity=0.712 Sum_probs=216.9
Q ss_pred CCcccccCCCCCCCCCCCCceEEeeCCeeEEEecCCCCCeeEEEEeccCCCCCchHHHHHHHHHHCCCEEEeccCCCCCc
Q 026476 1 MSGPQCCANPPTLNPNSGAGHVEKLGGLNAYVTGSPDSKLAVLLISDVYGYEAPNLRKLADKVAAAGFYVAVPDFFHGDP 80 (238)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~vl~~hg~~g~~~~~~~~~a~~l~~~G~~v~~~d~~~g~~ 80 (238)
|++.+||.+++...+...-|+.+.++++++|+........+||++..++|...+..+..|+.++..||.|++||+|+|.+
T Consensus 1 n~~~~cc~~~~~~~~~~~~g~~~~v~gldaYv~gs~~~~~~li~i~DvfG~~~~n~r~~Adk~A~~Gy~v~vPD~~~Gdp 80 (242)
T KOG3043|consen 1 NQPMPCCPDGKIAAEVDDGGREEEVGGLDAYVVGSTSSKKVLIVIQDVFGFQFPNTREGADKVALNGYTVLVPDFFRGDP 80 (242)
T ss_pred CCCCCCCCCcccccccCCCCceEeecCeeEEEecCCCCCeEEEEEEeeeccccHHHHHHHHHHhcCCcEEEcchhhcCCC
Confidence 57889999999999988889999999999999976655578999999999987778999999999999999999999999
Q ss_pred cCCCC-CcchHhhHhhcCCCcchhcHHHHHHHHHhcC-CceEEEEEeeccHHHHHHcc-CCcCceEEEEeccCCcCcccc
Q 026476 81 YVADG-GKPLQEWIKDHGVDKGFEEAKPVIQALKSKG-ITAIGAAGFCWGAKVVVQLG-KREFIQAAVLLHPSFVTVDDI 157 (238)
Q Consensus 81 ~~~~~-~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~-~~~i~l~G~S~GG~~a~~~a-~~~~i~a~i~~~~~~~~~~~~ 157 (238)
++++. ......|+++..++...+++..++++++.++ ..+|+++||||||.++..+. ..+.+.+++++||.+.+.++.
T Consensus 81 ~~~~~~~~~~~~w~~~~~~~~~~~~i~~v~k~lk~~g~~kkIGv~GfCwGak~vv~~~~~~~~f~a~v~~hps~~d~~D~ 160 (242)
T KOG3043|consen 81 WSPSLQKSERPEWMKGHSPPKIWKDITAVVKWLKNHGDSKKIGVVGFCWGAKVVVTLSAKDPEFDAGVSFHPSFVDSADI 160 (242)
T ss_pred CCCCCChhhhHHHHhcCCcccchhHHHHHHHHHHHcCCcceeeEEEEeecceEEEEeeccchhheeeeEecCCcCChhHH
Confidence 88875 7778899999999999999999999999886 78999999999999999866 556999999999999999999
Q ss_pred cccCCcEEEEecCCCCCCCHHhHHHHHHHHhhcCCCCceEEEcCCCCeeeee-cCCCCCHHHHHHHHHHHHHHHHHHHHh
Q 026476 158 KGVEVPLSILGAEIDRLSPPALVKEFEEALNAKSGVDSFVKIFPKVAHGWTV-RYNVEDETAVKAAEEAHHNLLEWFAKY 236 (238)
Q Consensus 158 ~~~~~P~L~i~g~~D~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~H~~~~-~~~~~~~~~~~~~~~~~~~~~~fl~~~ 236 (238)
.++++|+|++.++.|.++|+..+..+.+.+..++....++++|+|.+|||.. +.+...|+++.+.++++.+++.||+++
T Consensus 161 ~~vk~Pilfl~ae~D~~~p~~~v~~~ee~lk~~~~~~~~v~~f~g~~HGf~~~r~~~~~Ped~~~~eea~~~~~~Wf~~y 240 (242)
T KOG3043|consen 161 ANVKAPILFLFAELDEDVPPKDVKAWEEKLKENPAVGSQVKTFSGVGHGFVARRANISSPEDKKAAEEAYQRFISWFKHY 240 (242)
T ss_pred hcCCCCEEEEeecccccCCHHHHHHHHHHHhcCcccceeEEEcCCccchhhhhccCCCChhHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999996666666789999999999997 666678889999999999999999998
Q ss_pred cC
Q 026476 237 VK 238 (238)
Q Consensus 237 ~~ 238 (238)
+.
T Consensus 241 ~~ 242 (242)
T KOG3043|consen 241 LA 242 (242)
T ss_pred hC
Confidence 63
No 2
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=100.00 E-value=3.9e-34 Score=223.63 Aligned_cols=206 Identities=30% Similarity=0.515 Sum_probs=153.4
Q ss_pred eeEEEecCCCC--CeeEEEEeccCCCCCchHHHHHHHHHHCCCEEEeccCCCCCccCCCCCcchHhhHh---hcCCCcch
Q 026476 28 LNAYVTGSPDS--KLAVLLISDVYGYEAPNLRKLADKVAAAGFYVAVPDFFHGDPYVADGGKPLQEWIK---DHGVDKGF 102 (238)
Q Consensus 28 ~~~~~~~p~~~--~~~vl~~hg~~g~~~~~~~~~a~~l~~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~---~~~~~~~~ 102 (238)
+++|+..|++. .|+||++|+++|.+ ..++.+++.|+++||.|++||+|.|.+..+.........+. ....+...
T Consensus 1 ~~ay~~~P~~~~~~~~Vvv~~d~~G~~-~~~~~~ad~lA~~Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (218)
T PF01738_consen 1 IDAYVARPEGGGPRPAVVVIHDIFGLN-PNIRDLADRLAEEGYVVLAPDLFGGRGAPPSDPEEAFAAMRELFAPRPEQVA 79 (218)
T ss_dssp EEEEEEEETTSSSEEEEEEE-BTTBS--HHHHHHHHHHHHTT-EEEEE-CCCCTS--CCCHHCHHHHHHHCHHHSHHHHH
T ss_pred CeEEEEeCCCCCCCCEEEEEcCCCCCc-hHHHHHHHHHHhcCCCEEecccccCCCCCccchhhHHHHHHHHHhhhHHHHH
Confidence 47899999864 68999999999986 78899999999999999999998777622222111111211 11135677
Q ss_pred hcHHHHHHHHHhcC---CceEEEEEeeccHHHHHHccCC-cCceEEEEeccC-C--cCcccccccCCcEEEEecCCCCCC
Q 026476 103 EEAKPVIQALKSKG---ITAIGAAGFCWGAKVVVQLGKR-EFIQAAVLLHPS-F--VTVDDIKGVEVPLSILGAEIDRLS 175 (238)
Q Consensus 103 ~d~~~~~~~l~~~~---~~~i~l~G~S~GG~~a~~~a~~-~~i~a~i~~~~~-~--~~~~~~~~~~~P~L~i~g~~D~~~ 175 (238)
.|+.+++++++++. .+||+++|||+||.+++.++.. +.+++++.+||. . .......++++|+|+++|++|+.+
T Consensus 80 ~~~~aa~~~l~~~~~~~~~kig~vGfc~GG~~a~~~a~~~~~~~a~v~~yg~~~~~~~~~~~~~~~~P~l~~~g~~D~~~ 159 (218)
T PF01738_consen 80 ADLQAAVDYLRAQPEVDPGKIGVVGFCWGGKLALLLAARDPRVDAAVSFYGGSPPPPPLEDAPKIKAPVLILFGENDPFF 159 (218)
T ss_dssp HHHHHHHHHHHCTTTCEEEEEEEEEETHHHHHHHHHHCCTTTSSEEEEES-SSSGGGHHHHGGG--S-EEEEEETT-TTS
T ss_pred HHHHHHHHHHHhccccCCCcEEEEEEecchHHhhhhhhhccccceEEEEcCCCCCCcchhhhcccCCCEeecCccCCCCC
Confidence 88999999999875 5799999999999999998854 489999999992 2 223457789999999999999999
Q ss_pred CHHhHHHHHHHHhhcCCCCceEEEcCCCCeeeeecCCCCCHHHHHHHHHHHHHHHHHHHHhc
Q 026476 176 PPALVKEFEEALNAKSGVDSFVKIFPKVAHGWTVRYNVEDETAVKAAEEAHHNLLEWFAKYV 237 (238)
Q Consensus 176 p~~~~~~~~~~~~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~ 237 (238)
|.+.++++.+.+ ++.+.++++++|+|++|+|.++... .+++.+++++|+++++||+++|
T Consensus 160 ~~~~~~~~~~~l-~~~~~~~~~~~y~ga~HgF~~~~~~--~~~~~aa~~a~~~~~~ff~~~L 218 (218)
T PF01738_consen 160 PPEEVEALEEAL-KAAGVDVEVHVYPGAGHGFANPSRP--PYDPAAAEDAWQRTLAFFKRHL 218 (218)
T ss_dssp -HHHHHHHHHHH-HCTTTTEEEEEETT--TTTTSTTST--T--HHHHHHHHHHHHHHHCC--
T ss_pred ChHHHHHHHHHH-HhcCCcEEEEECCCCcccccCCCCc--ccCHHHHHHHHHHHHHHHHhcC
Confidence 999999999999 5678899999999999999987665 5566789999999999999986
No 3
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.98 E-value=2.2e-30 Score=203.32 Aligned_cols=210 Identities=24% Similarity=0.426 Sum_probs=170.1
Q ss_pred CCeeEEEecCCCC--CeeEEEEeccCCCCCchHHHHHHHHHHCCCEEEeccCCCCCccCCCCCcchHhh----HhhcCCC
Q 026476 26 GGLNAYVTGSPDS--KLAVLLISDVYGYEAPNLRKLADKVAAAGFYVAVPDFFHGDPYVADGGKPLQEW----IKDHGVD 99 (238)
Q Consensus 26 ~~~~~~~~~p~~~--~~~vl~~hg~~g~~~~~~~~~a~~l~~~G~~v~~~d~~~g~~~~~~~~~~~~~~----~~~~~~~ 99 (238)
+.+++|+..|.+. .|+||++|+++|.+ ..++.+++.|++.||.|++||+|.+.+............ ..+....
T Consensus 12 ~~~~~~~a~P~~~~~~P~VIv~hei~Gl~-~~i~~~a~rlA~~Gy~v~~Pdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (236)
T COG0412 12 GELPAYLARPAGAGGFPGVIVLHEIFGLN-PHIRDVARRLAKAGYVVLAPDLYGRQGDPTDIEDEPAELETGLVERVDPA 90 (236)
T ss_pred ceEeEEEecCCcCCCCCEEEEEecccCCc-hHHHHHHHHHHhCCcEEEechhhccCCCCCcccccHHHHhhhhhccCCHH
Confidence 4589999999853 37999999999996 689999999999999999999985554433322111111 1234447
Q ss_pred cchhcHHHHHHHHHhcC---CceEEEEEeeccHHHHHHccCCc-CceEEEEeccCCcC--cccccccCCcEEEEecCCCC
Q 026476 100 KGFEEAKPVIQALKSKG---ITAIGAAGFCWGAKVVVQLGKRE-FIQAAVLLHPSFVT--VDDIKGVEVPLSILGAEIDR 173 (238)
Q Consensus 100 ~~~~d~~~~~~~l~~~~---~~~i~l~G~S~GG~~a~~~a~~~-~i~a~i~~~~~~~~--~~~~~~~~~P~L~i~g~~D~ 173 (238)
+...|+.+++++|++++ ..+|+++||||||.+++.++... .+++++++||.... .....++++|+|+++++.|.
T Consensus 91 ~~~~d~~a~~~~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~~~~v~a~v~fyg~~~~~~~~~~~~~~~pvl~~~~~~D~ 170 (236)
T COG0412 91 EVLADIDAALDYLARQPQVDPKRIGVVGFCMGGGLALLAATRAPEVKAAVAFYGGLIADDTADAPKIKVPVLLHLAGEDP 170 (236)
T ss_pred HHHHHHHHHHHHHHhCCCCCCceEEEEEEcccHHHHHHhhcccCCccEEEEecCCCCCCcccccccccCcEEEEecccCC
Confidence 88899999999999875 77999999999999999998554 89999999999884 34456899999999999999
Q ss_pred CCCHHhHHHHHHHHhhcCCCCceEEEcCCCCeeeeecC-CCCCHHHHHHHHHHHHHHHHHHHHhc
Q 026476 174 LSPPALVKEFEEALNAKSGVDSFVKIFPKVAHGWTVRY-NVEDETAVKAAEEAHHNLLEWFAKYV 237 (238)
Q Consensus 174 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~H~~~~~~-~~~~~~~~~~~~~~~~~~~~fl~~~~ 237 (238)
.+|.+....+.+.+ ...+..+++++|+++.|+|++.. +....++...+++.|+++++||++++
T Consensus 171 ~~p~~~~~~~~~~~-~~~~~~~~~~~y~ga~H~F~~~~~~~~~~y~~~aa~~a~~~~~~ff~~~~ 234 (236)
T COG0412 171 YIPAADVDALAAAL-EDAGVKVDLEIYPGAGHGFANDRADYHPGYDAAAAEDAWQRVLAFFKRLL 234 (236)
T ss_pred CCChhHHHHHHHHH-HhcCCCeeEEEeCCCccccccCCCcccccCCHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999 55556888999999999999763 11123445689999999999999986
No 4
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.94 E-value=4.8e-26 Score=170.19 Aligned_cols=176 Identities=15% Similarity=0.237 Sum_probs=148.4
Q ss_pred CCeeEEEEeccCCCCCchHHHHHHHHHHCCCEEEeccCCCCCccCCCCCcchHhhHhhcCCCcchhcHHHHHHHHHhcCC
Q 026476 38 SKLAVLLISDVYGYEAPNLRKLADKVAAAGFYVAVPDFFHGDPYVADGGKPLQEWIKDHGVDKGFEEAKPVIQALKSKGI 117 (238)
Q Consensus 38 ~~~~vl~~hg~~g~~~~~~~~~a~~l~~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~ 117 (238)
...+||++||..|+. ..++.++++|.++||.|.+|.+ +|||..+. -+-..++..+.+|+.+.++.|++.+.
T Consensus 14 G~~AVLllHGFTGt~-~Dvr~Lgr~L~e~GyTv~aP~y-pGHG~~~e-------~fl~t~~~DW~~~v~d~Y~~L~~~gy 84 (243)
T COG1647 14 GNRAVLLLHGFTGTP-RDVRMLGRYLNENGYTVYAPRY-PGHGTLPE-------DFLKTTPRDWWEDVEDGYRDLKEAGY 84 (243)
T ss_pred CCEEEEEEeccCCCc-HHHHHHHHHHHHCCceEecCCC-CCCCCCHH-------HHhcCCHHHHHHHHHHHHHHHHHcCC
Confidence 348999999999996 7899999999999999999999 99987652 23355667788999999999998899
Q ss_pred ceEEEEEeeccHHHHHHccCCcCceEEEEeccCCcC--------------------------------------------
Q 026476 118 TAIGAAGFCWGAKVVVQLGKREFIQAAVLLHPSFVT-------------------------------------------- 153 (238)
Q Consensus 118 ~~i~l~G~S~GG~~a~~~a~~~~i~a~i~~~~~~~~-------------------------------------------- 153 (238)
+.|+++|.||||.+++.+|.+-.+++++.+.++...
T Consensus 85 ~eI~v~GlSmGGv~alkla~~~p~K~iv~m~a~~~~k~~~~iie~~l~y~~~~kk~e~k~~e~~~~e~~~~~~~~~~~~~ 164 (243)
T COG1647 85 DEIAVVGLSMGGVFALKLAYHYPPKKIVPMCAPVNVKSWRIIIEGLLEYFRNAKKYEGKDQEQIDKEMKSYKDTPMTTTA 164 (243)
T ss_pred CeEEEEeecchhHHHHHHHhhCCccceeeecCCcccccchhhhHHHHHHHHHhhhccCCCHHHHHHHHHHhhcchHHHHH
Confidence 999999999999999999965558888887654321
Q ss_pred ---------cccccccCCcEEEEecCCCCCCCHHhHHHHHHHHhhcCCCCceEEEcCCCCeeeeecCCCCCHHHHHHHHH
Q 026476 154 ---------VDDIKGVEVPLSILGAEIDRLSPPALVKEFEEALNAKSGVDSFVKIFPKVAHGWTVRYNVEDETAVKAAEE 224 (238)
Q Consensus 154 ---------~~~~~~~~~P~L~i~g~~D~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~ 224 (238)
...+..|..|+|+++|.+|+++|.+.+..+++.+.+ .+.++.+|++++|-++++. ..+.
T Consensus 165 ~~~~~i~~~~~~~~~I~~pt~vvq~~~D~mv~~~sA~~Iy~~v~s---~~KeL~~~e~SgHVIt~D~---------Erd~ 232 (243)
T COG1647 165 QLKKLIKDARRSLDKIYSPTLVVQGRQDEMVPAESANFIYDHVES---DDKELKWLEGSGHVITLDK---------ERDQ 232 (243)
T ss_pred HHHHHHHHHHhhhhhcccchhheecccCCCCCHHHHHHHHHhccC---CcceeEEEccCCceeecch---------hHHH
Confidence 012567889999999999999999999999998832 2778999999999998764 4578
Q ss_pred HHHHHHHHHH
Q 026476 225 AHHNLLEWFA 234 (238)
Q Consensus 225 ~~~~~~~fl~ 234 (238)
+.+.++.||+
T Consensus 233 v~e~V~~FL~ 242 (243)
T COG1647 233 VEEDVITFLE 242 (243)
T ss_pred HHHHHHHHhh
Confidence 9999999996
No 5
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=99.92 E-value=4.6e-24 Score=189.40 Aligned_cols=198 Identities=19% Similarity=0.304 Sum_probs=153.8
Q ss_pred CeeEEEecCCCC-----CeeEEEEeccCC-CCCchHHHHHHHHHHCCCEEEeccCCCCCccCCCCCcchHhhHhhcCCCc
Q 026476 27 GLNAYVTGSPDS-----KLAVLLISDVYG-YEAPNLRKLADKVAAAGFYVAVPDFFHGDPYVADGGKPLQEWIKDHGVDK 100 (238)
Q Consensus 27 ~~~~~~~~p~~~-----~~~vl~~hg~~g-~~~~~~~~~a~~l~~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~ 100 (238)
.+++|+..|.+. .|.||++||+.. .....+....+.|+++||+|+.+++ ||.... ++.+........-..
T Consensus 377 ~i~~~l~~P~~~~~~k~yP~i~~~hGGP~~~~~~~~~~~~q~~~~~G~~V~~~n~-RGS~Gy---G~~F~~~~~~~~g~~ 452 (620)
T COG1506 377 TIHGWLYKPPGFDPRKKYPLIVYIHGGPSAQVGYSFNPEIQVLASAGYAVLAPNY-RGSTGY---GREFADAIRGDWGGV 452 (620)
T ss_pred EEEEEEecCCCCCCCCCCCEEEEeCCCCccccccccchhhHHHhcCCeEEEEeCC-CCCCcc---HHHHHHhhhhccCCc
Confidence 389999998642 278999999853 2223467888999999999999999 876432 122222222233356
Q ss_pred chhcHHHHHHHHHhc---CCceEEEEEeeccHHHHHHcc-CCcCceEEEEeccCCcC-----------------------
Q 026476 101 GFEEAKPVIQALKSK---GITAIGAAGFCWGAKVVVQLG-KREFIQAAVLLHPSFVT----------------------- 153 (238)
Q Consensus 101 ~~~d~~~~~~~l~~~---~~~~i~l~G~S~GG~~a~~~a-~~~~i~a~i~~~~~~~~----------------------- 153 (238)
..+|+.++++++.++ +.+||+++|+|+||.++++++ ..+.++++++..+....
T Consensus 453 ~~~D~~~~~~~l~~~~~~d~~ri~i~G~SyGGymtl~~~~~~~~f~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 532 (620)
T COG1506 453 DLEDLIAAVDALVKLPLVDPERIGITGGSYGGYMTLLAATKTPRFKAAVAVAGGVDWLLYFGESTEGLRFDPEENGGGPP 532 (620)
T ss_pred cHHHHHHHHHHHHhCCCcChHHeEEeccChHHHHHHHHHhcCchhheEEeccCcchhhhhccccchhhcCCHHHhCCCcc
Confidence 778999999988777 567999999999999999977 55678888876553210
Q ss_pred -----------cccccccCCcEEEEecCCCCCCCHHhHHHHHHHHhhcCCCCceEEEcCCCCeeeeecCCCCCHHHHHHH
Q 026476 154 -----------VDDIKGVEVPLSILGAEIDRLSPPALVKEFEEALNAKSGVDSFVKIFPKVAHGWTVRYNVEDETAVKAA 222 (238)
Q Consensus 154 -----------~~~~~~~~~P~L~i~g~~D~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~ 222 (238)
.....++++|+|+|||++|..+|.+++.++.++| +..|.++++++||+.+|++..+ ...
T Consensus 533 ~~~~~~~~~sp~~~~~~i~~P~LliHG~~D~~v~~~q~~~~~~aL-~~~g~~~~~~~~p~e~H~~~~~---------~~~ 602 (620)
T COG1506 533 EDREKYEDRSPIFYADNIKTPLLLIHGEEDDRVPIEQAEQLVDAL-KRKGKPVELVVFPDEGHGFSRP---------ENR 602 (620)
T ss_pred cChHHHHhcChhhhhcccCCCEEEEeecCCccCChHHHHHHHHHH-HHcCceEEEEEeCCCCcCCCCc---------hhH
Confidence 1125678999999999999999999999999999 4578999999999999999763 246
Q ss_pred HHHHHHHHHHHHHhcC
Q 026476 223 EEAHHNLLEWFAKYVK 238 (238)
Q Consensus 223 ~~~~~~~~~fl~~~~~ 238 (238)
...++.+++||+++++
T Consensus 603 ~~~~~~~~~~~~~~~~ 618 (620)
T COG1506 603 VKVLKEILDWFKRHLK 618 (620)
T ss_pred HHHHHHHHHHHHHHhc
Confidence 7899999999999875
No 6
>PRK13604 luxD acyl transferase; Provisional
Probab=99.92 E-value=9.4e-24 Score=169.27 Aligned_cols=170 Identities=14% Similarity=0.159 Sum_probs=132.1
Q ss_pred eeEEEecCCC----CCeeEEEEeccCCCCCchHHHHHHHHHHCCCEEEeccCCCCC-ccCCCCCcchHhhHhhcCCCcch
Q 026476 28 LNAYVTGSPD----SKLAVLLISDVYGYEAPNLRKLADKVAAAGFYVAVPDFFHGD-PYVADGGKPLQEWIKDHGVDKGF 102 (238)
Q Consensus 28 ~~~~~~~p~~----~~~~vl~~hg~~g~~~~~~~~~a~~l~~~G~~v~~~d~~~g~-~~~~~~~~~~~~~~~~~~~~~~~ 102 (238)
+.+|+..|+. +.+.||++||..+.. ..+..+|++|+++||.|+.+|+ +|+ |.|.+.-. ..+.....
T Consensus 22 L~Gwl~~P~~~~~~~~~~vIi~HGf~~~~-~~~~~~A~~La~~G~~vLrfD~-rg~~GeS~G~~~-------~~t~s~g~ 92 (307)
T PRK13604 22 IRVWETLPKENSPKKNNTILIASGFARRM-DHFAGLAEYLSSNGFHVIRYDS-LHHVGLSSGTID-------EFTMSIGK 92 (307)
T ss_pred EEEEEEcCcccCCCCCCEEEEeCCCCCCh-HHHHHHHHHHHHCCCEEEEecC-CCCCCCCCCccc-------cCcccccH
Confidence 8999998852 346788888877753 5689999999999999999998 665 65544211 11222346
Q ss_pred hcHHHHHHHHHhcCCceEEEEEeeccHHHHHHccCCcCceEEEEeccCCc------------------------------
Q 026476 103 EEAKPVIQALKSKGITAIGAAGFCWGAKVVVQLGKREFIQAAVLLHPSFV------------------------------ 152 (238)
Q Consensus 103 ~d~~~~~~~l~~~~~~~i~l~G~S~GG~~a~~~a~~~~i~a~i~~~~~~~------------------------------ 152 (238)
.|+.++++|+++++..+|+++||||||.+++.+|..+.++++|+..|...
T Consensus 93 ~Dl~aaid~lk~~~~~~I~LiG~SmGgava~~~A~~~~v~~lI~~sp~~~l~d~l~~~~~~~~~~~p~~~lp~~~d~~g~ 172 (307)
T PRK13604 93 NSLLTVVDWLNTRGINNLGLIAASLSARIAYEVINEIDLSFLITAVGVVNLRDTLERALGYDYLSLPIDELPEDLDFEGH 172 (307)
T ss_pred HHHHHHHHHHHhcCCCceEEEEECHHHHHHHHHhcCCCCCEEEEcCCcccHHHHHHHhhhcccccCcccccccccccccc
Confidence 89999999999887789999999999999988876666888777654321
Q ss_pred --------------C-c------ccccccCCcEEEEecCCCCCCCHHhHHHHHHHHhhcCCCCceEEEcCCCCeeeee
Q 026476 153 --------------T-V------DDIKGVEVPLSILGAEIDRLSPPALVKEFEEALNAKSGVDSFVKIFPKVAHGWTV 209 (238)
Q Consensus 153 --------------~-~------~~~~~~~~P~L~i~g~~D~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~H~~~~ 209 (238)
. . +...+++.|+|+|||++|.++|.+.++++++.+++ .+.+++.++|+.|.|..
T Consensus 173 ~l~~~~f~~~~~~~~~~~~~s~i~~~~~l~~PvLiIHG~~D~lVp~~~s~~l~e~~~s---~~kkl~~i~Ga~H~l~~ 247 (307)
T PRK13604 173 NLGSEVFVTDCFKHGWDTLDSTINKMKGLDIPFIAFTANNDSWVKQSEVIDLLDSIRS---EQCKLYSLIGSSHDLGE 247 (307)
T ss_pred cccHHHHHHHHHhcCccccccHHHHHhhcCCCEEEEEcCCCCccCHHHHHHHHHHhcc---CCcEEEEeCCCccccCc
Confidence 0 0 11345678999999999999999999999998732 36789999999999964
No 7
>PRK10566 esterase; Provisional
Probab=99.92 E-value=1.2e-23 Score=167.53 Aligned_cols=193 Identities=17% Similarity=0.209 Sum_probs=137.8
Q ss_pred CCeeEEEecCCC----CCeeEEEEeccCCCCCchHHHHHHHHHHCCCEEEeccCCCCCccCCCC--CcchHhhHhhcCCC
Q 026476 26 GGLNAYVTGSPD----SKLAVLLISDVYGYEAPNLRKLADKVAAAGFYVAVPDFFHGDPYVADG--GKPLQEWIKDHGVD 99 (238)
Q Consensus 26 ~~~~~~~~~p~~----~~~~vl~~hg~~g~~~~~~~~~a~~l~~~G~~v~~~d~~~g~~~~~~~--~~~~~~~~~~~~~~ 99 (238)
.++..+.+.|.+ +.|+||++||..+.. ..+..+++.|+++||.|+++|+ +|++.+... ......|... ..
T Consensus 10 ~~~~~~~~~p~~~~~~~~p~vv~~HG~~~~~-~~~~~~~~~l~~~G~~v~~~d~-~g~G~~~~~~~~~~~~~~~~~--~~ 85 (249)
T PRK10566 10 AGIEVLHAFPAGQRDTPLPTVFFYHGFTSSK-LVYSYFAVALAQAGFRVIMPDA-PMHGARFSGDEARRLNHFWQI--LL 85 (249)
T ss_pred cCcceEEEcCCCCCCCCCCEEEEeCCCCccc-chHHHHHHHHHhCCCEEEEecC-CcccccCCCccccchhhHHHH--HH
Confidence 456666666642 347899999977664 5678899999999999999999 887653221 1111111110 11
Q ss_pred cchhcHHHHHHHHHhc---CCceEEEEEeeccHHHHHHcc-CCcCceEEEEeccCCc---------C-------------
Q 026476 100 KGFEEAKPVIQALKSK---GITAIGAAGFCWGAKVVVQLG-KREFIQAAVLLHPSFV---------T------------- 153 (238)
Q Consensus 100 ~~~~d~~~~~~~l~~~---~~~~i~l~G~S~GG~~a~~~a-~~~~i~a~i~~~~~~~---------~------------- 153 (238)
...+|+.+++++++++ +.++|+++|||+||.+++.++ ..+.+++.+.+.+... .
T Consensus 86 ~~~~~~~~~~~~l~~~~~~~~~~i~v~G~S~Gg~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (249)
T PRK10566 86 QNMQEFPTLRAAIREEGWLLDDRLAVGGASMGGMTALGIMARHPWVKCVASLMGSGYFTSLARTLFPPLIPETAAQQAEF 165 (249)
T ss_pred HHHHHHHHHHHHHHhcCCcCccceeEEeecccHHHHHHHHHhCCCeeEEEEeeCcHHHHHHHHHhcccccccccccHHHH
Confidence 2346777788888765 467999999999999999977 5666776655432110 0
Q ss_pred ------------ccccccc-CCcEEEEecCCCCCCCHHhHHHHHHHHhhcCCC--CceEEEcCCCCeeeeecCCCCCHHH
Q 026476 154 ------------VDDIKGV-EVPLSILGAEIDRLSPPALVKEFEEALNAKSGV--DSFVKIFPKVAHGWTVRYNVEDETA 218 (238)
Q Consensus 154 ------------~~~~~~~-~~P~L~i~g~~D~~~p~~~~~~~~~~~~~~~~~--~~~~~~~~g~~H~~~~~~~~~~~~~ 218 (238)
...+.++ ++|+|+++|++|.++|++..+++.+.+ ...+. ++++++|+|++|.+.
T Consensus 166 ~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l-~~~g~~~~~~~~~~~~~~H~~~---------- 234 (249)
T PRK10566 166 NNIVAPLAEWEVTHQLEQLADRPLLLWHGLADDVVPAAESLRLQQAL-RERGLDKNLTCLWEPGVRHRIT---------- 234 (249)
T ss_pred HHHHHHHhhcChhhhhhhcCCCCEEEEEcCCCCcCCHHHHHHHHHHH-HhcCCCcceEEEecCCCCCccC----------
Confidence 0113344 689999999999999999999999999 44454 478889999999973
Q ss_pred HHHHHHHHHHHHHHHHHhc
Q 026476 219 VKAAEEAHHNLLEWFAKYV 237 (238)
Q Consensus 219 ~~~~~~~~~~~~~fl~~~~ 237 (238)
...++.+++||++++
T Consensus 235 ----~~~~~~~~~fl~~~~ 249 (249)
T PRK10566 235 ----PEALDAGVAFFRQHL 249 (249)
T ss_pred ----HHHHHHHHHHHHhhC
Confidence 246899999999875
No 8
>PHA02857 monoglyceride lipase; Provisional
Probab=99.92 E-value=5e-23 Score=166.31 Aligned_cols=191 Identities=15% Similarity=0.164 Sum_probs=141.5
Q ss_pred eeEEEecCC-CCCeeEEEEeccCCCCCchHHHHHHHHHHCCCEEEeccCCCCCccCCCCCcchHhhHhhcCCCcchhcHH
Q 026476 28 LNAYVTGSP-DSKLAVLLISDVYGYEAPNLRKLADKVAAAGFYVAVPDFFHGDPYVADGGKPLQEWIKDHGVDKGFEEAK 106 (238)
Q Consensus 28 ~~~~~~~p~-~~~~~vl~~hg~~g~~~~~~~~~a~~l~~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 106 (238)
+.++.+.|. .+.+.|+++||+.+. ...+..+++.|++.||.|+++|+ +|+|.+....... ......++|+.
T Consensus 13 l~~~~~~~~~~~~~~v~llHG~~~~-~~~~~~~~~~l~~~g~~via~D~-~G~G~S~~~~~~~------~~~~~~~~d~~ 84 (276)
T PHA02857 13 IYCKYWKPITYPKALVFISHGAGEH-SGRYEELAENISSLGILVFSHDH-IGHGRSNGEKMMI------DDFGVYVRDVV 84 (276)
T ss_pred EEEEeccCCCCCCEEEEEeCCCccc-cchHHHHHHHHHhCCCEEEEccC-CCCCCCCCccCCc------CCHHHHHHHHH
Confidence 566666775 344556666987665 46789999999999999999999 9998775421111 12233567777
Q ss_pred HHHHHHHhc-CCceEEEEEeeccHHHHHHcc-CCc-CceEEEEeccCCcC------------------------------
Q 026476 107 PVIQALKSK-GITAIGAAGFCWGAKVVVQLG-KRE-FIQAAVLLHPSFVT------------------------------ 153 (238)
Q Consensus 107 ~~~~~l~~~-~~~~i~l~G~S~GG~~a~~~a-~~~-~i~a~i~~~~~~~~------------------------------ 153 (238)
+.++.++.. ...++.++||||||.+++.++ ..| .++++|++.+....
T Consensus 85 ~~l~~~~~~~~~~~~~lvG~S~GG~ia~~~a~~~p~~i~~lil~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (276)
T PHA02857 85 QHVVTIKSTYPGVPVFLLGHSMGATISILAAYKNPNLFTAMILMSPLVNAEAVPRLNLLAAKLMGIFYPNKIVGKLCPES 164 (276)
T ss_pred HHHHHHHhhCCCCCEEEEEcCchHHHHHHHHHhCccccceEEEeccccccccccHHHHHHHHHHHHhCCCCccCCCCHhh
Confidence 777776654 346899999999999999988 444 57888887653100
Q ss_pred -------------------------------------cccccccCCcEEEEecCCCCCCCHHhHHHHHHHHhhcCCCCce
Q 026476 154 -------------------------------------VDDIKGVEVPLSILGAEIDRLSPPALVKEFEEALNAKSGVDSF 196 (238)
Q Consensus 154 -------------------------------------~~~~~~~~~P~L~i~g~~D~~~p~~~~~~~~~~~~~~~~~~~~ 196 (238)
...+.++++|+|+++|++|.++|++.+..+.+.+. . +.+
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvliv~G~~D~i~~~~~~~~l~~~~~-~---~~~ 240 (276)
T PHA02857 165 VSRDMDEVYKYQYDPLVNHEKIKAGFASQVLKATNKVRKIIPKIKTPILILQGTNNEISDVSGAYYFMQHAN-C---NRE 240 (276)
T ss_pred ccCCHHHHHHHhcCCCccCCCccHHHHHHHHHHHHHHHHhcccCCCCEEEEecCCCCcCChHHHHHHHHHcc-C---Cce
Confidence 00145678999999999999999999999988762 1 467
Q ss_pred EEEcCCCCeeeeecCCCCCHHHHHHHHHHHHHHHHHHHHhc
Q 026476 197 VKIFPKVAHGWTVRYNVEDETAVKAAEEAHHNLLEWFAKYV 237 (238)
Q Consensus 197 ~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~ 237 (238)
++++++++|.+..+..+ ..+++++++++||.++-
T Consensus 241 ~~~~~~~gH~~~~e~~~-------~~~~~~~~~~~~l~~~~ 274 (276)
T PHA02857 241 IKIYEGAKHHLHKETDE-------VKKSVMKEIETWIFNRV 274 (276)
T ss_pred EEEeCCCcccccCCchh-------HHHHHHHHHHHHHHHhc
Confidence 99999999999764332 46889999999999863
No 9
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.91 E-value=1.8e-23 Score=163.81 Aligned_cols=193 Identities=18% Similarity=0.226 Sum_probs=142.5
Q ss_pred eeEEEecCCC--CCee-EEEEeccCCCCCchHHHHHHHHHHCCCEEEeccCCCCCccCCCCCcchHhhHhhcCCCcchhc
Q 026476 28 LNAYVTGSPD--SKLA-VLLISDVYGYEAPNLRKLADKVAAAGFYVAVPDFFHGDPYVADGGKPLQEWIKDHGVDKGFEE 104 (238)
Q Consensus 28 ~~~~~~~p~~--~~~~-vl~~hg~~g~~~~~~~~~a~~l~~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d 104 (238)
+.+-.+.|.. +.++ |+++||..+.....+..+|..|+..||.|++.|+ +|+|.+.+-. .+ -..++..++|
T Consensus 40 lft~~W~p~~~~~pr~lv~~~HG~g~~~s~~~~~~a~~l~~~g~~v~a~D~-~GhG~SdGl~----~y--i~~~d~~v~D 112 (313)
T KOG1455|consen 40 LFTQSWLPLSGTEPRGLVFLCHGYGEHSSWRYQSTAKRLAKSGFAVYAIDY-EGHGRSDGLH----AY--VPSFDLVVDD 112 (313)
T ss_pred eEEEecccCCCCCCceEEEEEcCCcccchhhHHHHHHHHHhCCCeEEEeec-cCCCcCCCCc----cc--CCcHHHHHHH
Confidence 4444555643 3334 5566665554335678999999999999999999 9999876531 11 2233567888
Q ss_pred HHHHHHHHHhc---CCceEEEEEeeccHHHHHHccC-Cc-CceEEEEeccCCcC--------------------------
Q 026476 105 AKPVIQALKSK---GITAIGAAGFCWGAKVVVQLGK-RE-FIQAAVLLHPSFVT-------------------------- 153 (238)
Q Consensus 105 ~~~~~~~l~~~---~~~~i~l~G~S~GG~~a~~~a~-~~-~i~a~i~~~~~~~~-------------------------- 153 (238)
+...++.++.+ ...+..++|+||||.++++++. +| ...++|+..|...-
T Consensus 113 ~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~p~~w~G~ilvaPmc~i~~~~kp~p~v~~~l~~l~~liP~wk~ 192 (313)
T KOG1455|consen 113 VISFFDSIKEREENKGLPRFLFGESMGGAVALLIALKDPNFWDGAILVAPMCKISEDTKPHPPVISILTLLSKLIPTWKI 192 (313)
T ss_pred HHHHHHHHhhccccCCCCeeeeecCcchHHHHHHHhhCCcccccceeeecccccCCccCCCcHHHHHHHHHHHhCCceee
Confidence 99988887766 3458899999999999999984 55 45555554432110
Q ss_pred ----------------------------------------------cccccccCCcEEEEecCCCCCCCHHhHHHHHHHH
Q 026476 154 ----------------------------------------------VDDIKGVEVPLSILGAEIDRLSPPALVKEFEEAL 187 (238)
Q Consensus 154 ----------------------------------------------~~~~~~~~~P~L~i~g~~D~~~p~~~~~~~~~~~ 187 (238)
...+.+++.|.|++||++|.++.+..++.+++..
T Consensus 193 vp~~d~~~~~~kdp~~r~~~~~npl~y~g~pRl~T~~ElLr~~~~le~~l~~vtvPflilHG~dD~VTDp~~Sk~Lye~A 272 (313)
T KOG1455|consen 193 VPTKDIIDVAFKDPEKRKILRSDPLCYTGKPRLKTAYELLRVTADLEKNLNEVTVPFLILHGTDDKVTDPKVSKELYEKA 272 (313)
T ss_pred cCCccccccccCCHHHHHHhhcCCceecCCccHHHHHHHHHHHHHHHHhcccccccEEEEecCCCcccCcHHHHHHHHhc
Confidence 0116778999999999999999999999999987
Q ss_pred hhcCCCCceEEEcCCCCeeeeecCCCCCHHHHHHHHHHHHHHHHHHHHh
Q 026476 188 NAKSGVDSFVKIFPKVAHGWTVRYNVEDETAVKAAEEAHHNLLEWFAKY 236 (238)
Q Consensus 188 ~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~ 236 (238)
. ..+.++++|||+-|++...-.+ +..+.++.++++||+++
T Consensus 273 ~---S~DKTlKlYpGm~H~Ll~gE~~------en~e~Vf~DI~~Wl~~r 312 (313)
T KOG1455|consen 273 S---SSDKTLKLYPGMWHSLLSGEPD------ENVEIVFGDIISWLDER 312 (313)
T ss_pred c---CCCCceeccccHHHHhhcCCCc------hhHHHHHHHHHHHHHhc
Confidence 3 3378899999999999852222 26789999999999986
No 10
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=99.91 E-value=1.7e-22 Score=168.54 Aligned_cols=194 Identities=17% Similarity=0.172 Sum_probs=138.2
Q ss_pred eeEEEecCCC--CCeeEEEEeccCCCCCchHHHHHHHHHHCCCEEEeccCCCCCccCCCCCcchHhhHhhcCCCcchhcH
Q 026476 28 LNAYVTGSPD--SKLAVLLISDVYGYEAPNLRKLADKVAAAGFYVAVPDFFHGDPYVADGGKPLQEWIKDHGVDKGFEEA 105 (238)
Q Consensus 28 ~~~~~~~p~~--~~~~vl~~hg~~g~~~~~~~~~a~~l~~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~ 105 (238)
+..+.+.|.+ ..++||++||+.+....++..++..|+++||.|+++|+ +|+|.+..... . ..+.+..++|+
T Consensus 74 l~~~~~~p~~~~~~~~iv~lHG~~~~~~~~~~~~~~~l~~~g~~v~~~D~-~G~G~S~~~~~----~--~~~~~~~~~dv 146 (349)
T PLN02385 74 IFSKSWLPENSRPKAAVCFCHGYGDTCTFFFEGIARKIASSGYGVFAMDY-PGFGLSEGLHG----Y--IPSFDDLVDDV 146 (349)
T ss_pred EEEEEEecCCCCCCeEEEEECCCCCccchHHHHHHHHHHhCCCEEEEecC-CCCCCCCCCCC----C--cCCHHHHHHHH
Confidence 3334445642 35788999997665323457899999999999999999 99987753200 0 11234466778
Q ss_pred HHHHHHHHhc---CCceEEEEEeeccHHHHHHcc-CCc-CceEEEEeccCCc----------------------------
Q 026476 106 KPVIQALKSK---GITAIGAAGFCWGAKVVVQLG-KRE-FIQAAVLLHPSFV---------------------------- 152 (238)
Q Consensus 106 ~~~~~~l~~~---~~~~i~l~G~S~GG~~a~~~a-~~~-~i~a~i~~~~~~~---------------------------- 152 (238)
.++++.+... +..++.++||||||.+++.++ ..| .++++|++.+...
T Consensus 147 ~~~l~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~~p~~v~glVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 226 (349)
T PLN02385 147 IEHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVHLKQPNAWDGAILVAPMCKIADDVVPPPLVLQILILLANLLPKAKLV 226 (349)
T ss_pred HHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHhCcchhhheeEecccccccccccCchHHHHHHHHHHHHCCCceec
Confidence 8888777543 345899999999999999987 444 5777776643210
Q ss_pred -C-------------------------------------------cccccccCCcEEEEecCCCCCCCHHhHHHHHHHHh
Q 026476 153 -T-------------------------------------------VDDIKGVEVPLSILGAEIDRLSPPALVKEFEEALN 188 (238)
Q Consensus 153 -~-------------------------------------------~~~~~~~~~P~L~i~g~~D~~~p~~~~~~~~~~~~ 188 (238)
. ...+.++++|+|+++|++|.++|++.++.+++.+.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~i~~P~Lii~G~~D~vv~~~~~~~l~~~~~ 306 (349)
T PLN02385 227 PQKDLAELAFRDLKKRKMAEYNVIAYKDKPRLRTAVELLRTTQEIEMQLEEVSLPLLILHGEADKVTDPSVSKFLYEKAS 306 (349)
T ss_pred CCCccccccccCHHHHHHhhcCcceeCCCcchHHHHHHHHHHHHHHHhcccCCCCEEEEEeCCCCccChHHHHHHHHHcC
Confidence 0 00134678999999999999999999999988762
Q ss_pred hcCCCCceEEEcCCCCeeeeecCCCCCHHHHHHHHHHHHHHHHHHHHhc
Q 026476 189 AKSGVDSFVKIFPKVAHGWTVRYNVEDETAVKAAEEAHHNLLEWFAKYV 237 (238)
Q Consensus 189 ~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~ 237 (238)
..+.++++|++++|.+...... ...+.+++.+++||++++
T Consensus 307 ---~~~~~l~~i~~~gH~l~~e~p~------~~~~~v~~~i~~wL~~~~ 346 (349)
T PLN02385 307 ---SSDKKLKLYEDAYHSILEGEPD------EMIFQVLDDIISWLDSHS 346 (349)
T ss_pred ---CCCceEEEeCCCeeecccCCCh------hhHHHHHHHHHHHHHHhc
Confidence 2256789999999998754332 135678999999999875
No 11
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.91 E-value=2.2e-22 Score=166.70 Aligned_cols=201 Identities=16% Similarity=0.214 Sum_probs=143.4
Q ss_pred eEEeeCCeeEE--EecCCC---CCeeEEEEeccCCCCCchHHHHHHHHHHCCCEEEeccCCCCCccCCCCCcchHhhHhh
Q 026476 21 HVEKLGGLNAY--VTGSPD---SKLAVLLISDVYGYEAPNLRKLADKVAAAGFYVAVPDFFHGDPYVADGGKPLQEWIKD 95 (238)
Q Consensus 21 ~~~~~~~~~~~--~~~p~~---~~~~vl~~hg~~g~~~~~~~~~a~~l~~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~ 95 (238)
.++..+|...+ .+.|.+ ..+.||++||+.+.....+..++..|+++||.|+++|+ +|+|.+... . .. .
T Consensus 36 ~~~~~dg~~l~~~~~~~~~~~~~~~~VvllHG~~~~~~~~~~~~~~~L~~~Gy~V~~~D~-rGhG~S~~~-~---~~--~ 108 (330)
T PLN02298 36 FFTSPRGLSLFTRSWLPSSSSPPRALIFMVHGYGNDISWTFQSTAIFLAQMGFACFALDL-EGHGRSEGL-R---AY--V 108 (330)
T ss_pred eEEcCCCCEEEEEEEecCCCCCCceEEEEEcCCCCCcceehhHHHHHHHhCCCEEEEecC-CCCCCCCCc-c---cc--C
Confidence 44455665444 344432 34679999998644222456788899999999999999 999876531 1 00 1
Q ss_pred cCCCcchhcHHHHHHHHHhc---CCceEEEEEeeccHHHHHHcc-CCc-CceEEEEeccCCc------------------
Q 026476 96 HGVDKGFEEAKPVIQALKSK---GITAIGAAGFCWGAKVVVQLG-KRE-FIQAAVLLHPSFV------------------ 152 (238)
Q Consensus 96 ~~~~~~~~d~~~~~~~l~~~---~~~~i~l~G~S~GG~~a~~~a-~~~-~i~a~i~~~~~~~------------------ 152 (238)
...+...+|+.+++++++.. ...++.++||||||.+++.++ ..| .++++|++.+...
T Consensus 109 ~~~~~~~~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~ 188 (330)
T PLN02298 109 PNVDLVVEDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLANPEGFDGAVLVAPMCKISDKIRPPWPIPQILTFV 188 (330)
T ss_pred CCHHHHHHHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcCcccceeEEEecccccCCcccCCchHHHHHHHHH
Confidence 12345678999999998764 245799999999999999977 445 5888887654210
Q ss_pred ----------------C---------------c-----------------------ccccccCCcEEEEecCCCCCCCHH
Q 026476 153 ----------------T---------------V-----------------------DDIKGVEVPLSILGAEIDRLSPPA 178 (238)
Q Consensus 153 ----------------~---------------~-----------------------~~~~~~~~P~L~i~g~~D~~~p~~ 178 (238)
. + ..+.++++|+|+++|++|.++|++
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~ivp~~ 268 (330)
T PLN02298 189 ARFLPTLAIVPTADLLEKSVKVPAKKIIAKRNPMRYNGKPRLGTVVELLRVTDYLGKKLKDVSIPFIVLHGSADVVTDPD 268 (330)
T ss_pred HHHCCCCccccCCCcccccccCHHHHHHHHhCccccCCCccHHHHHHHHHHHHHHHHhhhhcCCCEEEEecCCCCCCCHH
Confidence 0 0 002357899999999999999999
Q ss_pred hHHHHHHHHhhcCCCCceEEEcCCCCeeeeecCCCCCHHHHHHHHHHHHHHHHHHHHhc
Q 026476 179 LVKEFEEALNAKSGVDSFVKIFPKVAHGWTVRYNVEDETAVKAAEEAHHNLLEWFAKYV 237 (238)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~ 237 (238)
.++++++.+. ..+.++++|++++|.+...... ...+.+++.+.+||.+++
T Consensus 269 ~~~~l~~~i~---~~~~~l~~~~~a~H~~~~e~pd------~~~~~~~~~i~~fl~~~~ 318 (330)
T PLN02298 269 VSRALYEEAK---SEDKTIKIYDGMMHSLLFGEPD------ENIEIVRRDILSWLNERC 318 (330)
T ss_pred HHHHHHHHhc---cCCceEEEcCCcEeeeecCCCH------HHHHHHHHHHHHHHHHhc
Confidence 9999988772 2246799999999998754332 135678899999999875
No 12
>PRK10749 lysophospholipase L2; Provisional
Probab=99.90 E-value=2e-22 Score=166.85 Aligned_cols=207 Identities=14% Similarity=0.136 Sum_probs=146.0
Q ss_pred CceEEeeCCeeEEEe--cCCCCCeeEEEEeccCCCCCchHHHHHHHHHHCCCEEEeccCCCCCccCCCCC-cchHhhHhh
Q 026476 19 AGHVEKLGGLNAYVT--GSPDSKLAVLLISDVYGYEAPNLRKLADKVAAAGFYVAVPDFFHGDPYVADGG-KPLQEWIKD 95 (238)
Q Consensus 19 ~~~~~~~~~~~~~~~--~p~~~~~~vl~~hg~~g~~~~~~~~~a~~l~~~G~~v~~~d~~~g~~~~~~~~-~~~~~~~~~ 95 (238)
.+.+...++...++. .|..+.++||++||..+. ...+..++..|++.||.|+++|+ +|+|.+.... ...... .
T Consensus 32 ~~~~~~~~g~~l~~~~~~~~~~~~~vll~HG~~~~-~~~y~~~~~~l~~~g~~v~~~D~-~G~G~S~~~~~~~~~~~--~ 107 (330)
T PRK10749 32 EAEFTGVDDIPIRFVRFRAPHHDRVVVICPGRIES-YVKYAELAYDLFHLGYDVLIIDH-RGQGRSGRLLDDPHRGH--V 107 (330)
T ss_pred ceEEEcCCCCEEEEEEccCCCCCcEEEEECCccch-HHHHHHHHHHHHHCCCeEEEEcC-CCCCCCCCCCCCCCcCc--c
Confidence 344555566555544 444445788999997665 35788999999999999999999 9998775321 000000 1
Q ss_pred cCCCcchhcHHHHHHHHHhc-CCceEEEEEeeccHHHHHHcc-CCc-CceEEEEeccCCc--------------------
Q 026476 96 HGVDKGFEEAKPVIQALKSK-GITAIGAAGFCWGAKVVVQLG-KRE-FIQAAVLLHPSFV-------------------- 152 (238)
Q Consensus 96 ~~~~~~~~d~~~~~~~l~~~-~~~~i~l~G~S~GG~~a~~~a-~~~-~i~a~i~~~~~~~-------------------- 152 (238)
...+...+|+..+++.+... +..++.++||||||.+++.++ ..+ .++++|++.+...
T Consensus 108 ~~~~~~~~d~~~~~~~~~~~~~~~~~~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~ 187 (330)
T PRK10749 108 ERFNDYVDDLAAFWQQEIQPGPYRKRYALAHSMGGAILTLFLQRHPGVFDAIALCAPMFGIVLPLPSWMARRILNWAEGH 187 (330)
T ss_pred ccHHHHHHHHHHHHHHHHhcCCCCCeEEEEEcHHHHHHHHHHHhCCCCcceEEEECchhccCCCCCcHHHHHHHHHHHHh
Confidence 23355677888888776443 567999999999999999876 444 5777776654210
Q ss_pred ---------------------------C-------------c-----------------------ccccccCCcEEEEec
Q 026476 153 ---------------------------T-------------V-----------------------DDIKGVEVPLSILGA 169 (238)
Q Consensus 153 ---------------------------~-------------~-----------------------~~~~~~~~P~L~i~g 169 (238)
. + ..+.++++|+|+|+|
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lii~G 267 (330)
T PRK10749 188 PRIRDGYAIGTGRWRPLPFAINVLTHSRERYRRNLRFYADDPELRVGGPTYHWVRESILAGEQVLAGAGDITTPLLLLQA 267 (330)
T ss_pred cCCCCcCCCCCCCCCCCCcCCCCCCCCHHHHHHHHHHHHhCCCcccCCCcHHHHHHHHHHHHHHHhhccCCCCCEEEEEe
Confidence 0 0 012457889999999
Q ss_pred CCCCCCCHHhHHHHHHHHhhcC--CCCceEEEcCCCCeeeeecCCCCCHHHHHHHHHHHHHHHHHHHHh
Q 026476 170 EIDRLSPPALVKEFEEALNAKS--GVDSFVKIFPKVAHGWTVRYNVEDETAVKAAEEAHHNLLEWFAKY 236 (238)
Q Consensus 170 ~~D~~~p~~~~~~~~~~~~~~~--~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~ 236 (238)
++|.+++++.++.+++.++... ..+.++++|+|++|......+. ..+.+++.+++||+++
T Consensus 268 ~~D~vv~~~~~~~~~~~l~~~~~~~~~~~l~~~~gagH~~~~E~~~-------~r~~v~~~i~~fl~~~ 329 (330)
T PRK10749 268 EEERVVDNRMHDRFCEARTAAGHPCEGGKPLVIKGAYHEILFEKDA-------MRSVALNAIVDFFNRH 329 (330)
T ss_pred CCCeeeCHHHHHHHHHHHhhcCCCCCCceEEEeCCCcchhhhCCcH-------HHHHHHHHHHHHHhhc
Confidence 9999999999999998883221 1356799999999998764431 3578999999999875
No 13
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=99.90 E-value=5.3e-23 Score=160.13 Aligned_cols=168 Identities=23% Similarity=0.317 Sum_probs=125.7
Q ss_pred HHHHHHHHHCCCEEEeccCCCCCccCCCCCcchHhhHhhcCCCcchhcHHHHHHHHHhc---CCceEEEEEeeccHHHHH
Q 026476 57 RKLADKVAAAGFYVAVPDFFHGDPYVADGGKPLQEWIKDHGVDKGFEEAKPVIQALKSK---GITAIGAAGFCWGAKVVV 133 (238)
Q Consensus 57 ~~~a~~l~~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~---~~~~i~l~G~S~GG~~a~ 133 (238)
....+.|+++||+|+.+|+ ||.+... ...............++|+.++++++.++ +.+||+++|+|+||.+++
T Consensus 4 ~~~~~~la~~Gy~v~~~~~-rGs~g~g---~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~ 79 (213)
T PF00326_consen 4 NWNAQLLASQGYAVLVPNY-RGSGGYG---KDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLAL 79 (213)
T ss_dssp SHHHHHHHTTT-EEEEEE--TTSSSSH---HHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHH
T ss_pred eHHHHHHHhCCEEEEEEcC-CCCCccc---hhHHHhhhccccccchhhHHHHHHHHhccccccceeEEEEcccccccccc
Confidence 3567889999999999999 8775321 11111111222245678999999999877 578999999999999999
Q ss_pred HccC-Cc-CceEEEEeccCCcC---------------------------------cccccc--cCCcEEEEecCCCCCCC
Q 026476 134 QLGK-RE-FIQAAVLLHPSFVT---------------------------------VDDIKG--VEVPLSILGAEIDRLSP 176 (238)
Q Consensus 134 ~~a~-~~-~i~a~i~~~~~~~~---------------------------------~~~~~~--~~~P~L~i~g~~D~~~p 176 (238)
.++. .+ .+++++...|.... ...+.+ +++|+|++||++|..+|
T Consensus 80 ~~~~~~~~~f~a~v~~~g~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~P~li~hG~~D~~Vp 159 (213)
T PF00326_consen 80 LAATQHPDRFKAAVAGAGVSDLFSYYGTTDIYTKAEYLEYGDPWDNPEFYRELSPISPADNVQIKPPVLIIHGENDPRVP 159 (213)
T ss_dssp HHHHHTCCGSSEEEEESE-SSTTCSBHHTCCHHHGHHHHHSSTTTSHHHHHHHHHGGGGGGCGGGSEEEEEEETTBSSST
T ss_pred hhhcccceeeeeeeccceecchhcccccccccccccccccCccchhhhhhhhhccccccccccCCCCEEEEccCCCCccC
Confidence 9774 54 67888887654221 011445 78999999999999999
Q ss_pred HHhHHHHHHHHhhcCCCCceEEEcCCCCeeeeecCCCCCHHHHHHHHHHHHHHHHHHHHhcC
Q 026476 177 PALVKEFEEALNAKSGVDSFVKIFPKVAHGWTVRYNVEDETAVKAAEEAHHNLLEWFAKYVK 238 (238)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~ 238 (238)
++++.+++++| ++.+.++++++||+.+|++... ....+..+++.+||+++|+
T Consensus 160 ~~~s~~~~~~L-~~~g~~~~~~~~p~~gH~~~~~---------~~~~~~~~~~~~f~~~~l~ 211 (213)
T PF00326_consen 160 PSQSLRLYNAL-RKAGKPVELLIFPGEGHGFGNP---------ENRRDWYERILDFFDKYLK 211 (213)
T ss_dssp THHHHHHHHHH-HHTTSSEEEEEETT-SSSTTSH---------HHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHH-HhcCCCEEEEEcCcCCCCCCCc---------hhHHHHHHHHHHHHHHHcC
Confidence 99999999999 5678899999999999988643 2345788999999999985
No 14
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.89 E-value=6.5e-22 Score=166.58 Aligned_cols=190 Identities=17% Similarity=0.252 Sum_probs=141.1
Q ss_pred eeEEEecCC--CCCeeEEEEeccCCCCCchHHHHHHHHHHCCCEEEeccCCCCCccCCCCCcchHhhHhhcCCCcchhcH
Q 026476 28 LNAYVTGSP--DSKLAVLLISDVYGYEAPNLRKLADKVAAAGFYVAVPDFFHGDPYVADGGKPLQEWIKDHGVDKGFEEA 105 (238)
Q Consensus 28 ~~~~~~~p~--~~~~~vl~~hg~~g~~~~~~~~~a~~l~~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~ 105 (238)
+....+.|. ...++||++||+.+. ...+..+++.|+++||.|+++|+ +|+|.+..... .....+...+|+
T Consensus 123 l~~~~~~p~~~~~~~~Vl~lHG~~~~-~~~~~~~a~~L~~~Gy~V~~~D~-rGhG~S~~~~~------~~~~~~~~~~Dl 194 (395)
T PLN02652 123 LFCRSWAPAAGEMRGILIIIHGLNEH-SGRYLHFAKQLTSCGFGVYAMDW-IGHGGSDGLHG------YVPSLDYVVEDT 194 (395)
T ss_pred EEEEEecCCCCCCceEEEEECCchHH-HHHHHHHHHHHHHCCCEEEEeCC-CCCCCCCCCCC------CCcCHHHHHHHH
Confidence 444455563 234678899998765 35678999999999999999999 99987754210 011234467889
Q ss_pred HHHHHHHHhc-CCceEEEEEeeccHHHHHHccCCc----CceEEEEeccCCc----------------------------
Q 026476 106 KPVIQALKSK-GITAIGAAGFCWGAKVVVQLGKRE----FIQAAVLLHPSFV---------------------------- 152 (238)
Q Consensus 106 ~~~~~~l~~~-~~~~i~l~G~S~GG~~a~~~a~~~----~i~a~i~~~~~~~---------------------------- 152 (238)
.++++.+... +..++.++||||||.+++.++.++ .++++|+..+...
T Consensus 195 ~~~l~~l~~~~~~~~i~lvGhSmGG~ial~~a~~p~~~~~v~glVL~sP~l~~~~~~~~~~~~~~l~~~~~p~~~~~~~~ 274 (395)
T PLN02652 195 EAFLEKIRSENPGVPCFLFGHSTGGAVVLKAASYPSIEDKLEGIVLTSPALRVKPAHPIVGAVAPIFSLVAPRFQFKGAN 274 (395)
T ss_pred HHHHHHHHHhCCCCCEEEEEECHHHHHHHHHHhccCcccccceEEEECcccccccchHHHHHHHHHHHHhCCCCcccCcc
Confidence 9999988765 345899999999999999877543 5777777654210
Q ss_pred ----C-------------------------------------cccccccCCcEEEEecCCCCCCCHHhHHHHHHHHhhcC
Q 026476 153 ----T-------------------------------------VDDIKGVEVPLSILGAEIDRLSPPALVKEFEEALNAKS 191 (238)
Q Consensus 153 ----~-------------------------------------~~~~~~~~~P~L~i~g~~D~~~p~~~~~~~~~~~~~~~ 191 (238)
. .+.+.++++|+|+++|++|.++|++.++.+++.+.
T Consensus 275 ~~~~~~s~~~~~~~~~~~dp~~~~g~i~~~~~~~~~~~~~~l~~~L~~I~vPvLIi~G~~D~vvp~~~a~~l~~~~~--- 351 (395)
T PLN02652 275 KRGIPVSRDPAALLAKYSDPLVYTGPIRVRTGHEILRISSYLTRNFKSVTVPFMVLHGTADRVTDPLASQDLYNEAA--- 351 (395)
T ss_pred cccCCcCCCHHHHHHHhcCCCcccCCchHHHHHHHHHHHHHHHhhcccCCCCEEEEEeCCCCCCCHHHHHHHHHhcC---
Confidence 0 00135578999999999999999999999988762
Q ss_pred CCCceEEEcCCCCeeeeecCCCCCHHHHHHHHHHHHHHHHHHHHhc
Q 026476 192 GVDSFVKIFPKVAHGWTVRYNVEDETAVKAAEEAHHNLLEWFAKYV 237 (238)
Q Consensus 192 ~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~ 237 (238)
+...++++|+|++|...... ..+++++.+.+||.+++
T Consensus 352 ~~~k~l~~~~ga~H~l~~e~---------~~e~v~~~I~~FL~~~~ 388 (395)
T PLN02652 352 SRHKDIKLYDGFLHDLLFEP---------EREEVGRDIIDWMEKRL 388 (395)
T ss_pred CCCceEEEECCCeEEeccCC---------CHHHHHHHHHHHHHHHh
Confidence 22467889999999987642 24789999999999875
No 15
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.87 E-value=1.4e-21 Score=142.69 Aligned_cols=142 Identities=25% Similarity=0.407 Sum_probs=115.8
Q ss_pred eEEEEeccCCCCCchHHHHHHHHHHCCCEEEeccCCCCCccCCCCCcchHhhHhhcCCCcchhcHHHHHHHHHh--cCCc
Q 026476 41 AVLLISDVYGYEAPNLRKLADKVAAAGFYVAVPDFFHGDPYVADGGKPLQEWIKDHGVDKGFEEAKPVIQALKS--KGIT 118 (238)
Q Consensus 41 ~vl~~hg~~g~~~~~~~~~a~~l~~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~--~~~~ 118 (238)
+||++||+.+.. ..+..+++.|+++||.|+.+|+ ++.+.+. ...++.++++.+.. .+.+
T Consensus 1 ~vv~~HG~~~~~-~~~~~~~~~l~~~G~~v~~~~~-~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~ 61 (145)
T PF12695_consen 1 VVVLLHGWGGSR-RDYQPLAEALAEQGYAVVAFDY-PGHGDSD-----------------GADAVERVLADIRAGYPDPD 61 (145)
T ss_dssp EEEEECTTTTTT-HHHHHHHHHHHHTTEEEEEESC-TTSTTSH-----------------HSHHHHHHHHHHHHHHCTCC
T ss_pred CEEEECCCCCCH-HHHHHHHHHHHHCCCEEEEEec-CCCCccc-----------------hhHHHHHHHHHHHhhcCCCC
Confidence 589999988774 6789999999999999999999 7766442 11356666666522 2778
Q ss_pred eEEEEEeeccHHHHHHcc-CCcCceEEEEeccCCcCcccccccCCcEEEEecCCCCCCCHHhHHHHHHHHhhcCCCCceE
Q 026476 119 AIGAAGFCWGAKVVVQLG-KREFIQAAVLLHPSFVTVDDIKGVEVPLSILGAEIDRLSPPALVKEFEEALNAKSGVDSFV 197 (238)
Q Consensus 119 ~i~l~G~S~GG~~a~~~a-~~~~i~a~i~~~~~~~~~~~~~~~~~P~L~i~g~~D~~~p~~~~~~~~~~~~~~~~~~~~~ 197 (238)
+|+++|||+||.+++.++ .++.++++|++.+ +...+.+.+.+.|+|+++|++|+++|.+..+++++.++ .+.++
T Consensus 62 ~i~l~G~S~Gg~~a~~~~~~~~~v~~~v~~~~-~~~~~~~~~~~~pv~~i~g~~D~~~~~~~~~~~~~~~~----~~~~~ 136 (145)
T PF12695_consen 62 RIILIGHSMGGAIAANLAARNPRVKAVVLLSP-YPDSEDLAKIRIPVLFIHGENDPLVPPEQVRRLYEALP----GPKEL 136 (145)
T ss_dssp EEEEEEETHHHHHHHHHHHHSTTESEEEEESE-SSGCHHHTTTTSEEEEEEETT-SSSHHHHHHHHHHHHC----SSEEE
T ss_pred cEEEEEEccCcHHHHHHhhhccceeEEEEecC-ccchhhhhccCCcEEEEEECCCCcCCHHHHHHHHHHcC----CCcEE
Confidence 999999999999999987 4589999999998 44466678899999999999999999999999999883 36889
Q ss_pred EEcCCCCee
Q 026476 198 KIFPKVAHG 206 (238)
Q Consensus 198 ~~~~g~~H~ 206 (238)
.+++|++|+
T Consensus 137 ~~i~g~~H~ 145 (145)
T PF12695_consen 137 YIIPGAGHF 145 (145)
T ss_dssp EEETTS-TT
T ss_pred EEeCCCcCc
Confidence 999999995
No 16
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.87 E-value=1.1e-20 Score=160.21 Aligned_cols=183 Identities=16% Similarity=0.192 Sum_probs=129.8
Q ss_pred CeeEEEecCCC-CCeeEEEEeccCCC-CCchHHHHHHHHHHCCCEEEeccCCCCCccCCCCCcchHhhHhhcCCCcchhc
Q 026476 27 GLNAYVTGSPD-SKLAVLLISDVYGY-EAPNLRKLADKVAAAGFYVAVPDFFHGDPYVADGGKPLQEWIKDHGVDKGFEE 104 (238)
Q Consensus 27 ~~~~~~~~p~~-~~~~vl~~hg~~g~-~~~~~~~~a~~l~~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d 104 (238)
.+++|+..|.. +..++|++||+.+. ....+..+++.|+++||+|+++|+ +|+|.+..... . ......
T Consensus 180 ~l~g~l~~P~~~~~~P~Vli~gG~~~~~~~~~~~~~~~La~~Gy~vl~~D~-pG~G~s~~~~~---------~-~d~~~~ 248 (414)
T PRK05077 180 PITGFLHLPKGDGPFPTVLVCGGLDSLQTDYYRLFRDYLAPRGIAMLTIDM-PSVGFSSKWKL---------T-QDSSLL 248 (414)
T ss_pred EEEEEEEECCCCCCccEEEEeCCcccchhhhHHHHHHHHHhCCCEEEEECC-CCCCCCCCCCc---------c-ccHHHH
Confidence 38999988863 22344555555543 224567789999999999999999 88876643100 0 011122
Q ss_pred HHHHHHHHHhc---CCceEEEEEeeccHHHHHHcc-CCc-CceEEEEeccCCcC--------------------------
Q 026476 105 AKPVIQALKSK---GITAIGAAGFCWGAKVVVQLG-KRE-FIQAAVLLHPSFVT-------------------------- 153 (238)
Q Consensus 105 ~~~~~~~l~~~---~~~~i~l~G~S~GG~~a~~~a-~~~-~i~a~i~~~~~~~~-------------------------- 153 (238)
..++++++..+ +.++|+++||||||.+++.++ ..+ .++++|++.+....
T Consensus 249 ~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~p~ri~a~V~~~~~~~~~~~~~~~~~~~p~~~~~~la~~lg~~ 328 (414)
T PRK05077 249 HQAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLEPPRLKAVACLGPVVHTLLTDPKRQQQVPEMYLDVLASRLGMH 328 (414)
T ss_pred HHHHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHhCCcCceEEEEECCccchhhcchhhhhhchHHHHHHHHHHhCCC
Confidence 35677888766 678999999999999999988 445 79999987654210
Q ss_pred cc------------------cc-cccCCcEEEEecCCCCCCCHHhHHHHHHHHhhcCCCCceEEEcCCCCeeeeecCCCC
Q 026476 154 VD------------------DI-KGVEVPLSILGAEIDRLSPPALVKEFEEALNAKSGVDSFVKIFPKVAHGWTVRYNVE 214 (238)
Q Consensus 154 ~~------------------~~-~~~~~P~L~i~g~~D~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~H~~~~~~~~~ 214 (238)
.. .+ .++++|+|+|+|++|+++|++.++.+.+.. . +.++.+++++ |.+.
T Consensus 329 ~~~~~~l~~~l~~~sl~~~~~l~~~i~~PvLiI~G~~D~ivP~~~a~~l~~~~---~--~~~l~~i~~~-~~~e------ 396 (414)
T PRK05077 329 DASDEALRVELNRYSLKVQGLLGRRCPTPMLSGYWKNDPFSPEEDSRLIASSS---A--DGKLLEIPFK-PVYR------ 396 (414)
T ss_pred CCChHHHHHHhhhccchhhhhhccCCCCcEEEEecCCCCCCCHHHHHHHHHhC---C--CCeEEEccCC-CccC------
Confidence 00 01 357899999999999999999999887655 1 4568889974 3221
Q ss_pred CHHHHHHHHHHHHHHHHHHHHhcC
Q 026476 215 DETAVKAAEEAHHNLLEWFAKYVK 238 (238)
Q Consensus 215 ~~~~~~~~~~~~~~~~~fl~~~~~ 238 (238)
..+++++.+.+||++++.
T Consensus 397 ------~~~~~~~~i~~wL~~~l~ 414 (414)
T PRK05077 397 ------NFDKALQEISDWLEDRLC 414 (414)
T ss_pred ------CHHHHHHHHHHHHHHHhC
Confidence 347899999999999863
No 17
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.87 E-value=1.8e-20 Score=152.24 Aligned_cols=201 Identities=18% Similarity=0.243 Sum_probs=148.7
Q ss_pred CceEEeeCCeeEEEe--cCCCCC-eeEEEEeccCCCCCchHHHHHHHHHHCCCEEEeccCCCCCccCC-CCCcchHhhHh
Q 026476 19 AGHVEKLGGLNAYVT--GSPDSK-LAVLLISDVYGYEAPNLRKLADKVAAAGFYVAVPDFFHGDPYVA-DGGKPLQEWIK 94 (238)
Q Consensus 19 ~~~~~~~~~~~~~~~--~p~~~~-~~vl~~hg~~g~~~~~~~~~a~~l~~~G~~v~~~d~~~g~~~~~-~~~~~~~~~~~ 94 (238)
.+.+...+++..++. .+..+. ..||++||.... ...+..+++.|+.+||.|++.|. ||+|.+. +......
T Consensus 11 ~~~~~~~d~~~~~~~~~~~~~~~~g~Vvl~HG~~Eh-~~ry~~la~~l~~~G~~V~~~D~-RGhG~S~r~~rg~~~---- 84 (298)
T COG2267 11 EGYFTGADGTRLRYRTWAAPEPPKGVVVLVHGLGEH-SGRYEELADDLAARGFDVYALDL-RGHGRSPRGQRGHVD---- 84 (298)
T ss_pred cceeecCCCceEEEEeecCCCCCCcEEEEecCchHH-HHHHHHHHHHHHhCCCEEEEecC-CCCCCCCCCCcCCch----
Confidence 455566677665554 333333 678888887665 46788999999999999999999 9999886 3211111
Q ss_pred hcCCCcchhcHHHHHHHHHhc-CCceEEEEEeeccHHHHHHcc-CC-cCceEEEEeccCCc-------------------
Q 026476 95 DHGVDKGFEEAKPVIQALKSK-GITAIGAAGFCWGAKVVVQLG-KR-EFIQAAVLLHPSFV------------------- 152 (238)
Q Consensus 95 ~~~~~~~~~d~~~~~~~l~~~-~~~~i~l~G~S~GG~~a~~~a-~~-~~i~a~i~~~~~~~------------------- 152 (238)
.+..+..|+..+++.+... ...++.++||||||.+++.++ .. +.++++|+..|.+.
T Consensus 85 --~f~~~~~dl~~~~~~~~~~~~~~p~~l~gHSmGg~Ia~~~~~~~~~~i~~~vLssP~~~l~~~~~~~~~~~~~~~~~~ 162 (298)
T COG2267 85 --SFADYVDDLDAFVETIAEPDPGLPVFLLGHSMGGLIALLYLARYPPRIDGLVLSSPALGLGGAILRLILARLALKLLG 162 (298)
T ss_pred --hHHHHHHHHHHHHHHHhccCCCCCeEEEEeCcHHHHHHHHHHhCCccccEEEEECccccCChhHHHHHHHHHhccccc
Confidence 1345778889999888764 567999999999999999977 33 47888877643210
Q ss_pred -------Ccc----c----------------------------------------------ccccCCcEEEEecCCCCCC
Q 026476 153 -------TVD----D----------------------------------------------IKGVEVPLSILGAEIDRLS 175 (238)
Q Consensus 153 -------~~~----~----------------------------------------------~~~~~~P~L~i~g~~D~~~ 175 (238)
... . ..++++|+|+++|++|.++
T Consensus 163 ~~~p~~~~~~~~~~~~~~~~~sr~~~~~~~~~~dP~~~~~~~~~~w~~~~~~a~~~~~~~~~~~~~~PvLll~g~~D~vv 242 (298)
T COG2267 163 RIRPKLPVDSNLLEGVLTDDLSRDPAEVAAYEADPLIGVGGPVSRWVDLALLAGRVPALRDAPAIALPVLLLQGGDDRVV 242 (298)
T ss_pred ccccccccCcccccCcCcchhhcCHHHHHHHhcCCccccCCccHHHHHHHHHhhcccchhccccccCCEEEEecCCCccc
Confidence 000 0 3456889999999999999
Q ss_pred C-HHhHHHHHHHHhhcCCCCceEEEcCCCCeeeeecCCCCCHHHHHHHHHHHHHHHHHHHHhc
Q 026476 176 P-PALVKEFEEALNAKSGVDSFVKIFPKVAHGWTVRYNVEDETAVKAAEEAHHNLLEWFAKYV 237 (238)
Q Consensus 176 p-~~~~~~~~~~~~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~ 237 (238)
+ .+...++++.+. ..+.++++|+|+.|...++.+. ..+++++.+.+||.++.
T Consensus 243 ~~~~~~~~~~~~~~---~~~~~~~~~~g~~He~~~E~~~-------~r~~~~~~~~~~l~~~~ 295 (298)
T COG2267 243 DNVEGLARFFERAG---SPDKELKVIPGAYHELLNEPDR-------AREEVLKDILAWLAEAL 295 (298)
T ss_pred cCcHHHHHHHHhcC---CCCceEEecCCcchhhhcCcch-------HHHHHHHHHHHHHHhhc
Confidence 9 677777777662 2247899999999999887654 34899999999999875
No 18
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=99.87 E-value=1.5e-20 Score=153.19 Aligned_cols=196 Identities=16% Similarity=0.083 Sum_probs=136.0
Q ss_pred ceEEeeCCeeEEEecCCCCCeeEEEEeccCCCCCchHHHHHHHHHHCCCEEEeccCCCCCccCCCCCcchHhhHhhcCCC
Q 026476 20 GHVEKLGGLNAYVTGSPDSKLAVLLISDVYGYEAPNLRKLADKVAAAGFYVAVPDFFHGDPYVADGGKPLQEWIKDHGVD 99 (238)
Q Consensus 20 ~~~~~~~~~~~~~~~p~~~~~~vl~~hg~~g~~~~~~~~~a~~l~~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~ 99 (238)
......+++..++.....+.++||++||+.++. ..+..++..|++. |.|+++|+ +|+|.+.............++.+
T Consensus 10 ~~~~~~~~~~i~y~~~G~~~~~vlllHG~~~~~-~~w~~~~~~L~~~-~~vi~~Dl-pG~G~S~~~~~~~~~~~~~~~~~ 86 (294)
T PLN02824 10 TRTWRWKGYNIRYQRAGTSGPALVLVHGFGGNA-DHWRKNTPVLAKS-HRVYAIDL-LGYGYSDKPNPRSAPPNSFYTFE 86 (294)
T ss_pred CceEEEcCeEEEEEEcCCCCCeEEEECCCCCCh-hHHHHHHHHHHhC-CeEEEEcC-CCCCCCCCCccccccccccCCHH
Confidence 455677777776654332457899999987764 6788899999877 69999999 99988754210000000122334
Q ss_pred cchhcHHHHHHHHHhcCCceEEEEEeeccHHHHHHccC-Cc-CceEEEEeccCCc-------------------------
Q 026476 100 KGFEEAKPVIQALKSKGITAIGAAGFCWGAKVVVQLGK-RE-FIQAAVLLHPSFV------------------------- 152 (238)
Q Consensus 100 ~~~~d~~~~~~~l~~~~~~~i~l~G~S~GG~~a~~~a~-~~-~i~a~i~~~~~~~------------------------- 152 (238)
...+|+.++++.+ +.+++.++||||||.+++.++. .| .++++|++.+...
T Consensus 87 ~~a~~l~~~l~~l---~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (294)
T PLN02824 87 TWGEQLNDFCSDV---VGDPAFVICNSVGGVVGLQAAVDAPELVRGVMLINISLRGLHIKKQPWLGRPFIKAFQNLLRET 163 (294)
T ss_pred HHHHHHHHHHHHh---cCCCeEEEEeCHHHHHHHHHHHhChhheeEEEEECCCcccccccccchhhhHHHHHHHHHHhch
Confidence 4455555555544 5689999999999999999883 44 6777777643210
Q ss_pred -------------------------C-------------------------------------cccccccCCcEEEEecC
Q 026476 153 -------------------------T-------------------------------------VDDIKGVEVPLSILGAE 170 (238)
Q Consensus 153 -------------------------~-------------------------------------~~~~~~~~~P~L~i~g~ 170 (238)
. .+.+.++++|+|+|+|+
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~ 243 (294)
T PLN02824 164 AVGKAFFKSVATPETVKNILCQCYHDDSAVTDELVEAILRPGLEPGAVDVFLDFISYSGGPLPEELLPAVKCPVLIAWGE 243 (294)
T ss_pred hHHHHHHHhhcCHHHHHHHHHHhccChhhccHHHHHHHHhccCCchHHHHHHHHhccccccchHHHHhhcCCCeEEEEec
Confidence 0 00134578899999999
Q ss_pred CCCCCCHHhHHHHHHHHhhcCCCCceEEEcCCCCeeeeecCCCCCHHHHHHHHHHHHHHHHHHHHh
Q 026476 171 IDRLSPPALVKEFEEALNAKSGVDSFVKIFPKVAHGWTVRYNVEDETAVKAAEEAHHNLLEWFAKY 236 (238)
Q Consensus 171 ~D~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~ 236 (238)
+|.++|.+..+.+.+.+ . ..+++++++++|..... ..++..+.+.+||+++
T Consensus 244 ~D~~~~~~~~~~~~~~~---~--~~~~~~i~~~gH~~~~e----------~p~~~~~~i~~fl~~~ 294 (294)
T PLN02824 244 KDPWEPVELGRAYANFD---A--VEDFIVLPGVGHCPQDE----------APELVNPLIESFVARH 294 (294)
T ss_pred CCCCCChHHHHHHHhcC---C--ccceEEeCCCCCChhhh----------CHHHHHHHHHHHHhcC
Confidence 99999998887765533 1 35688999999987653 3467888999999864
No 19
>PRK11460 putative hydrolase; Provisional
Probab=99.86 E-value=1.6e-20 Score=147.78 Aligned_cols=179 Identities=15% Similarity=0.135 Sum_probs=119.4
Q ss_pred CCeeEEEEeccCCCCCchHHHHHHHHHHCCC--EEEeccCCCCCccCCCCCcchHhhHhhcC--CC-------cchhcHH
Q 026476 38 SKLAVLLISDVYGYEAPNLRKLADKVAAAGF--YVAVPDFFHGDPYVADGGKPLQEWIKDHG--VD-------KGFEEAK 106 (238)
Q Consensus 38 ~~~~vl~~hg~~g~~~~~~~~~a~~l~~~G~--~v~~~d~~~g~~~~~~~~~~~~~~~~~~~--~~-------~~~~d~~ 106 (238)
..|.||++||..++. ..+..+++.|++.++ .++.|+. ...... .....|..... .+ .....+.
T Consensus 15 ~~~~vIlLHG~G~~~-~~~~~l~~~l~~~~~~~~~i~~~g---~~~~~~--~~g~~W~~~~~~~~~~~~~~~~~~~~~l~ 88 (232)
T PRK11460 15 AQQLLLLFHGVGDNP-VAMGEIGSWFAPAFPDALVVSVGG---PEPSGN--GAGRQWFSVQGITEDNRQARVAAIMPTFI 88 (232)
T ss_pred CCcEEEEEeCCCCCh-HHHHHHHHHHHHHCCCCEEECCCC---CCCcCC--CCCcccccCCCCCccchHHHHHHHHHHHH
Confidence 457899999987774 678899999998764 4555554 211100 00112321111 11 1122233
Q ss_pred HHHHHHHhc---CCceEEEEEeeccHHHHHHcc-CCcC-ceEEEEeccCCcCcccccccCCcEEEEecCCCCCCCHHhHH
Q 026476 107 PVIQALKSK---GITAIGAAGFCWGAKVVVQLG-KREF-IQAAVLLHPSFVTVDDIKGVEVPLSILGAEIDRLSPPALVK 181 (238)
Q Consensus 107 ~~~~~l~~~---~~~~i~l~G~S~GG~~a~~~a-~~~~-i~a~i~~~~~~~~~~~~~~~~~P~L~i~g~~D~~~p~~~~~ 181 (238)
++++++..+ +.++|+++|||+||.+++.++ ..+. +.+++.+++............+|+|++||++|+++|.+.++
T Consensus 89 ~~i~~~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~~~~~vv~~sg~~~~~~~~~~~~~pvli~hG~~D~vvp~~~~~ 168 (232)
T PRK11460 89 ETVRYWQQQSGVGASATALIGFSQGAIMALEAVKAEPGLAGRVIAFSGRYASLPETAPTATTIHLIHGGEDPVIDVAHAV 168 (232)
T ss_pred HHHHHHHHhcCCChhhEEEEEECHHHHHHHHHHHhCCCcceEEEEeccccccccccccCCCcEEEEecCCCCccCHHHHH
Confidence 344444333 356899999999999999977 5554 45566777655433333456889999999999999999999
Q ss_pred HHHHHHhhcCCCCceEEEcCCCCeeeeecCCCCCHHHHHHHHHHHHHHHHHHHHhc
Q 026476 182 EFEEALNAKSGVDSFVKIFPKVAHGWTVRYNVEDETAVKAAEEAHHNLLEWFAKYV 237 (238)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~ 237 (238)
++.+.+ ++.+.+++++.|++++|.+.. +..+.+.+||.+.+
T Consensus 169 ~~~~~L-~~~g~~~~~~~~~~~gH~i~~--------------~~~~~~~~~l~~~l 209 (232)
T PRK11460 169 AAQEAL-ISLGGDVTLDIVEDLGHAIDP--------------RLMQFALDRLRYTV 209 (232)
T ss_pred HHHHHH-HHCCCCeEEEEECCCCCCCCH--------------HHHHHHHHHHHHHc
Confidence 999999 456778999999999999953 45555666666543
No 20
>PRK00870 haloalkane dehalogenase; Provisional
Probab=99.85 E-value=1.4e-19 Score=148.10 Aligned_cols=195 Identities=15% Similarity=0.148 Sum_probs=132.1
Q ss_pred CceEEeeCC-----eeEEEecCCC-CCeeEEEEeccCCCCCchHHHHHHHHHHCCCEEEeccCCCCCccCCCCCcchHhh
Q 026476 19 AGHVEKLGG-----LNAYVTGSPD-SKLAVLLISDVYGYEAPNLRKLADKVAAAGFYVAVPDFFHGDPYVADGGKPLQEW 92 (238)
Q Consensus 19 ~~~~~~~~~-----~~~~~~~p~~-~~~~vl~~hg~~g~~~~~~~~~a~~l~~~G~~v~~~d~~~g~~~~~~~~~~~~~~ 92 (238)
.+++..+++ +..++..-.. ..|+|||+||+.+.. ..+..++..|.+.||.|+++|+ +|+|.+......
T Consensus 20 ~~~~~~~~~~~~~~~~i~y~~~G~~~~~~lvliHG~~~~~-~~w~~~~~~L~~~gy~vi~~Dl-~G~G~S~~~~~~---- 93 (302)
T PRK00870 20 APHYVDVDDGDGGPLRMHYVDEGPADGPPVLLLHGEPSWS-YLYRKMIPILAAAGHRVIAPDL-IGFGRSDKPTRR---- 93 (302)
T ss_pred CceeEeecCCCCceEEEEEEecCCCCCCEEEEECCCCCch-hhHHHHHHHHHhCCCEEEEECC-CCCCCCCCCCCc----
Confidence 556666665 5666553222 357899999987664 6778999999888999999999 999876432100
Q ss_pred HhhcCCCcchhcHHHHHHHHHhcCCceEEEEEeeccHHHHHHcc-CCc-CceEEEEeccCCc------------------
Q 026476 93 IKDHGVDKGFEEAKPVIQALKSKGITAIGAAGFCWGAKVVVQLG-KRE-FIQAAVLLHPSFV------------------ 152 (238)
Q Consensus 93 ~~~~~~~~~~~d~~~~~~~l~~~~~~~i~l~G~S~GG~~a~~~a-~~~-~i~a~i~~~~~~~------------------ 152 (238)
..+..+...+|+.+ ++.+.+.+++.++||||||.+++.++ ..| .+++++++.+...
T Consensus 94 -~~~~~~~~a~~l~~---~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~ 169 (302)
T PRK00870 94 -EDYTYARHVEWMRS---WFEQLDLTDVTLVCQDWGGLIGLRLAAEHPDRFARLVVANTGLPTGDGPMPDAFWAWRAFSQ 169 (302)
T ss_pred -ccCCHHHHHHHHHH---HHHHcCCCCEEEEEEChHHHHHHHHHHhChhheeEEEEeCCCCCCccccchHHHhhhhcccc
Confidence 01122333444444 44445677999999999999999988 333 5666665532100
Q ss_pred -------------------C------------c------------------------------ccccccCCcEEEEecCC
Q 026476 153 -------------------T------------V------------------------------DDIKGVEVPLSILGAEI 171 (238)
Q Consensus 153 -------------------~------------~------------------------------~~~~~~~~P~L~i~g~~ 171 (238)
. . ..+.++++|+|+|+|++
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~ 249 (302)
T PRK00870 170 YSPVLPVGRLVNGGTVRDLSDAVRAAYDAPFPDESYKAGARAFPLLVPTSPDDPAVAANRAAWAVLERWDKPFLTAFSDS 249 (302)
T ss_pred cCchhhHHHHhhccccccCCHHHHHHhhcccCChhhhcchhhhhhcCCCCCCCcchHHHHHHHHhhhcCCCceEEEecCC
Confidence 0 0 01245688999999999
Q ss_pred CCCCCHHhHHHHHHHHhhcCCCCceEEEcCCCCeeeeecCCCCCHHHHHHHHHHHHHHHHHHHHh
Q 026476 172 DRLSPPALVKEFEEALNAKSGVDSFVKIFPKVAHGWTVRYNVEDETAVKAAEEAHHNLLEWFAKY 236 (238)
Q Consensus 172 D~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~ 236 (238)
|+++|.+. +.+.+.+. +. ...++.++++++|..... ..++..+.+.+||+++
T Consensus 250 D~~~~~~~-~~~~~~~~-~~-~~~~~~~i~~~gH~~~~e----------~p~~~~~~l~~fl~~~ 301 (302)
T PRK00870 250 DPITGGGD-AILQKRIP-GA-AGQPHPTIKGAGHFLQED----------SGEELAEAVLEFIRAT 301 (302)
T ss_pred CCcccCch-HHHHhhcc-cc-cccceeeecCCCccchhh----------ChHHHHHHHHHHHhcC
Confidence 99998766 67777662 11 123467899999998653 3367888999999875
No 21
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=99.85 E-value=2.2e-19 Score=145.23 Aligned_cols=190 Identities=12% Similarity=0.094 Sum_probs=126.7
Q ss_pred CCceEEeeC-----CeeEEEecCCCCCeeEEEEeccCCCCCchHH---HHHHHHHHCCCEEEeccCCCCCccCCCCCcch
Q 026476 18 GAGHVEKLG-----GLNAYVTGSPDSKLAVLLISDVYGYEAPNLR---KLADKVAAAGFYVAVPDFFHGDPYVADGGKPL 89 (238)
Q Consensus 18 ~~~~~~~~~-----~~~~~~~~p~~~~~~vl~~hg~~g~~~~~~~---~~a~~l~~~G~~v~~~d~~~g~~~~~~~~~~~ 89 (238)
.++++..++ +...++... +..|+||++||+.+.. ..+. .....+++.||.|+++|+ +|+|.+......
T Consensus 5 ~~~~~~~~~~~~~~~~~~~y~~~-g~~~~ivllHG~~~~~-~~~~~~~~~~~~l~~~~~~vi~~D~-~G~G~S~~~~~~- 80 (282)
T TIGR03343 5 STSKFVKINEKGLSNFRIHYNEA-GNGEAVIMLHGGGPGA-GGWSNYYRNIGPFVDAGYRVILKDS-PGFNKSDAVVMD- 80 (282)
T ss_pred CcceEEEcccccccceeEEEEec-CCCCeEEEECCCCCch-hhHHHHHHHHHHHHhCCCEEEEECC-CCCCCCCCCcCc-
Confidence 345555443 244444433 3557899999975442 2232 335567778999999999 999877532100
Q ss_pred HhhHhhcCCCcchhcHHHHHHHHHhcCCceEEEEEeeccHHHHHHccC-Cc-CceEEEEeccCCc---------------
Q 026476 90 QEWIKDHGVDKGFEEAKPVIQALKSKGITAIGAAGFCWGAKVVVQLGK-RE-FIQAAVLLHPSFV--------------- 152 (238)
Q Consensus 90 ~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~i~l~G~S~GG~~a~~~a~-~~-~i~a~i~~~~~~~--------------- 152 (238)
........+|+. +.+...+.+++.++||||||.+++.++. .| .++++|++.+...
T Consensus 81 -----~~~~~~~~~~l~---~~l~~l~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~ 152 (282)
T TIGR03343 81 -----EQRGLVNARAVK---GLMDALDIEKAHLVGNSMGGATALNFALEYPDRIGKLILMGPGGLGPSLFAPMPMEGIKL 152 (282)
T ss_pred -----ccccchhHHHHH---HHHHHcCCCCeeEEEECchHHHHHHHHHhChHhhceEEEECCCCCCccccccCchHHHHH
Confidence 000011233444 4444457789999999999999999884 44 6777776543100
Q ss_pred ----------------------Cc----------------------------------------ccccccCCcEEEEecC
Q 026476 153 ----------------------TV----------------------------------------DDIKGVEVPLSILGAE 170 (238)
Q Consensus 153 ----------------------~~----------------------------------------~~~~~~~~P~L~i~g~ 170 (238)
.. ..+.++++|+|+++|+
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlli~G~ 232 (282)
T TIGR03343 153 LFKLYAEPSYETLKQMLNVFLFDQSLITEELLQGRWENIQRQPEHLKNFLISSQKAPLSTWDVTARLGEIKAKTLVTWGR 232 (282)
T ss_pred HHHHhcCCCHHHHHHHHhhCccCcccCcHHHHHhHHHHhhcCHHHHHHHHHhccccccccchHHHHHhhCCCCEEEEEcc
Confidence 00 0134578999999999
Q ss_pred CCCCCCHHhHHHHHHHHhhcCCCCceEEEcCCCCeeeeecCCCCCHHHHHHHHHHHHHHHHHHH
Q 026476 171 IDRLSPPALVKEFEEALNAKSGVDSFVKIFPKVAHGWTVRYNVEDETAVKAAEEAHHNLLEWFA 234 (238)
Q Consensus 171 ~D~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~ 234 (238)
+|.++|++..+++.+.++ +.+++++++++|..... ..+...+.+.+||+
T Consensus 233 ~D~~v~~~~~~~~~~~~~-----~~~~~~i~~agH~~~~e----------~p~~~~~~i~~fl~ 281 (282)
T TIGR03343 233 DDRFVPLDHGLKLLWNMP-----DAQLHVFSRCGHWAQWE----------HADAFNRLVIDFLR 281 (282)
T ss_pred CCCcCCchhHHHHHHhCC-----CCEEEEeCCCCcCCccc----------CHHHHHHHHHHHhh
Confidence 999999998888887662 56788999999998653 23577888889986
No 22
>PRK10162 acetyl esterase; Provisional
Probab=99.84 E-value=2.3e-19 Score=147.73 Aligned_cols=189 Identities=19% Similarity=0.205 Sum_probs=139.6
Q ss_pred CCeeEEEecCCC-CCeeEEEEeccC---CCCCchHHHHHHHHHHC-CCEEEeccCCCCCccCCCCCcchHhhHhhcCCCc
Q 026476 26 GGLNAYVTGSPD-SKLAVLLISDVY---GYEAPNLRKLADKVAAA-GFYVAVPDFFHGDPYVADGGKPLQEWIKDHGVDK 100 (238)
Q Consensus 26 ~~~~~~~~~p~~-~~~~vl~~hg~~---g~~~~~~~~~a~~l~~~-G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~ 100 (238)
+.+++.++.|.. ..|+||++||+. |+ ......+++.|+.. |+.|+++|| |..+ +.....
T Consensus 67 g~i~~~~y~P~~~~~p~vv~~HGGg~~~g~-~~~~~~~~~~la~~~g~~Vv~vdY-rlap--------------e~~~p~ 130 (318)
T PRK10162 67 GQVETRLYYPQPDSQATLFYLHGGGFILGN-LDTHDRIMRLLASYSGCTVIGIDY-TLSP--------------EARFPQ 130 (318)
T ss_pred CceEEEEECCCCCCCCEEEEEeCCcccCCC-chhhhHHHHHHHHHcCCEEEEecC-CCCC--------------CCCCCC
Confidence 348888888864 357889999854 33 23456788889884 999999998 5432 112344
Q ss_pred chhcHHHHHHHHHhc------CCceEEEEEeeccHHHHHHccC--------CcCceEEEEeccCCcCc------------
Q 026476 101 GFEEAKPVIQALKSK------GITAIGAAGFCWGAKVVVQLGK--------REFIQAAVLLHPSFVTV------------ 154 (238)
Q Consensus 101 ~~~d~~~~~~~l~~~------~~~~i~l~G~S~GG~~a~~~a~--------~~~i~a~i~~~~~~~~~------------ 154 (238)
..+|+.++++++.+. +.++|+++|+|+||.+++.++. .+.++++++++|.....
T Consensus 131 ~~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~~~~~s~~~~~~~~ 210 (318)
T PRK10162 131 AIEEIVAVCCYFHQHAEDYGINMSRIGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLYGLRDSVSRRLLGGVW 210 (318)
T ss_pred cHHHHHHHHHHHHHhHHHhCCChhHEEEEEECHHHHHHHHHHHHHHhcCCCccChhheEEECCccCCCCChhHHHhCCCc
Confidence 678999999988653 4579999999999999998762 13688888887743100
Q ss_pred -------------------------------ccccccCCcEEEEecCCCCCCCHHhHHHHHHHHhhcCCCCceEEEcCCC
Q 026476 155 -------------------------------DDIKGVEVPLSILGAEIDRLSPPALVKEFEEALNAKSGVDSFVKIFPKV 203 (238)
Q Consensus 155 -------------------------------~~~~~~~~P~L~i~g~~D~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~ 203 (238)
.++.....|+++++|+.|++. ++...+.+.+ ++.|+++++++|+|.
T Consensus 211 ~~l~~~~~~~~~~~y~~~~~~~~~p~~~p~~~~l~~~lPp~~i~~g~~D~L~--de~~~~~~~L-~~aGv~v~~~~~~g~ 287 (318)
T PRK10162 211 DGLTQQDLQMYEEAYLSNDADRESPYYCLFNNDLTRDVPPCFIAGAEFDPLL--DDSRLLYQTL-AAHQQPCEFKLYPGT 287 (318)
T ss_pred cccCHHHHHHHHHHhCCCccccCCcccCcchhhhhcCCCCeEEEecCCCcCc--ChHHHHHHHH-HHcCCCEEEEEECCC
Confidence 000122369999999999975 5788999999 567899999999999
Q ss_pred CeeeeecCCCCCHHHHHHHHHHHHHHHHHHHHhcC
Q 026476 204 AHGWTVRYNVEDETAVKAAEEAHHNLLEWFAKYVK 238 (238)
Q Consensus 204 ~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~ 238 (238)
.|+|....... ..++++++.+.+||+++++
T Consensus 288 ~H~f~~~~~~~-----~~a~~~~~~~~~~l~~~~~ 317 (318)
T PRK10162 288 LHAFLHYSRMM-----DTADDALRDGAQFFTAQLK 317 (318)
T ss_pred ceehhhccCch-----HHHHHHHHHHHHHHHHHhc
Confidence 99997543221 3567899999999999874
No 23
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.84 E-value=3e-19 Score=144.21 Aligned_cols=186 Identities=19% Similarity=0.188 Sum_probs=133.7
Q ss_pred CeeEEEecCCC-CCeeEEEEeccCCCC---CchHHHHHHHHHHCCCEEEeccCCCCCccCCCCCcchHhhHhhcCCCcch
Q 026476 27 GLNAYVTGSPD-SKLAVLLISDVYGYE---APNLRKLADKVAAAGFYVAVPDFFHGDPYVADGGKPLQEWIKDHGVDKGF 102 (238)
Q Consensus 27 ~~~~~~~~p~~-~~~~vl~~hg~~g~~---~~~~~~~a~~l~~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 102 (238)
.+.+++..|.+ +.++||++||+.+.. ...+..+++.|+++||.|+++|+ +|++.+.... .......
T Consensus 13 ~l~g~~~~p~~~~~~~vv~i~gg~~~~~g~~~~~~~la~~l~~~G~~v~~~Dl-~G~G~S~~~~---------~~~~~~~ 82 (274)
T TIGR03100 13 TLVGVLHIPGASHTTGVLIVVGGPQYRVGSHRQFVLLARRLAEAGFPVLRFDY-RGMGDSEGEN---------LGFEGID 82 (274)
T ss_pred EEEEEEEcCCCCCCCeEEEEeCCccccCCchhHHHHHHHHHHHCCCEEEEeCC-CCCCCCCCCC---------CCHHHHH
Confidence 37888888874 456899999865421 23356789999999999999999 8998765321 1223456
Q ss_pred hcHHHHHHHHHhc--CCceEEEEEeeccHHHHHHcc-CCcCceEEEEeccCCcCc-------------------------
Q 026476 103 EEAKPVIQALKSK--GITAIGAAGFCWGAKVVVQLG-KREFIQAAVLLHPSFVTV------------------------- 154 (238)
Q Consensus 103 ~d~~~~~~~l~~~--~~~~i~l~G~S~GG~~a~~~a-~~~~i~a~i~~~~~~~~~------------------------- 154 (238)
+|+.++++++++. +.++|.++|||+||.+++.++ ..+.++++|++.+.....
T Consensus 83 ~d~~~~~~~l~~~~~g~~~i~l~G~S~Gg~~a~~~a~~~~~v~~lil~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (274)
T TIGR03100 83 ADIAAAIDAFREAAPHLRRIVAWGLCDAASAALLYAPADLRVAGLVLLNPWVRTEAAQAASRIRHYYLGQLLSADFWRKL 162 (274)
T ss_pred HHHHHHHHHHHhhCCCCCcEEEEEECHHHHHHHHHhhhCCCccEEEEECCccCCcccchHHHHHHHHHHHHhChHHHHHh
Confidence 8899999999875 457899999999999999987 446899998886542200
Q ss_pred --------------------------------------ccccccCCcEEEEecCCCCCCCHHhH------HHHHHHHhhc
Q 026476 155 --------------------------------------DDIKGVEVPLSILGAEIDRLSPPALV------KEFEEALNAK 190 (238)
Q Consensus 155 --------------------------------------~~~~~~~~P~L~i~g~~D~~~p~~~~------~~~~~~~~~~ 190 (238)
..+.++++|+|+++|+.|...+ +.. .+..+.+ .
T Consensus 163 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~P~ll~~g~~D~~~~-~~~~~~~~~~~~~~~l-~- 239 (274)
T TIGR03100 163 LSGEVNLGSSLRGLGDALLKARQKGDEVAHGGLAERMKAGLERFQGPVLFILSGNDLTAQ-EFADSVLGEPAWRGAL-E- 239 (274)
T ss_pred cCCCccHHHHHHHHHHHHHhhhhcCCCcccchHHHHHHHHHHhcCCcEEEEEcCcchhHH-HHHHHhccChhhHHHh-h-
Confidence 0033568899999999998752 222 2233333 1
Q ss_pred CCCCceEEEcCCCCeeeeecCCCCCHHHHHHHHHHHHHHHHHHHH
Q 026476 191 SGVDSFVKIFPKVAHGWTVRYNVEDETAVKAAEEAHHNLLEWFAK 235 (238)
Q Consensus 191 ~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~ 235 (238)
..++++..+++++|.++.+ +..++..+.+.+||++
T Consensus 240 -~~~v~~~~~~~~~H~l~~e---------~~~~~v~~~i~~wL~~ 274 (274)
T TIGR03100 240 -DPGIERVEIDGADHTFSDR---------VWREWVAARTTEWLRR 274 (274)
T ss_pred -cCCeEEEecCCCCcccccH---------HHHHHHHHHHHHHHhC
Confidence 1367789999999966443 2457899999999963
No 24
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=99.84 E-value=5.4e-19 Score=142.35 Aligned_cols=190 Identities=17% Similarity=0.235 Sum_probs=131.6
Q ss_pred CCceEEeeCCeeEEEecCCC-CCeeEEEEeccCCCCCchHHHHHHHHHHCCCEEEeccCCCCCccCCCCCcchHhhHhhc
Q 026476 18 GAGHVEKLGGLNAYVTGSPD-SKLAVLLISDVYGYEAPNLRKLADKVAAAGFYVAVPDFFHGDPYVADGGKPLQEWIKDH 96 (238)
Q Consensus 18 ~~~~~~~~~~~~~~~~~p~~-~~~~vl~~hg~~g~~~~~~~~~a~~l~~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~ 96 (238)
..+++++++++..++..... ..++||++||+.+.. ..+..+...|++ +|.|+++|+ +|+|.+..... ...
T Consensus 6 ~~~~~~~~~~~~~~~~~~g~~~~~~vv~~hG~~~~~-~~~~~~~~~l~~-~~~vi~~D~-~G~G~S~~~~~------~~~ 76 (278)
T TIGR03056 6 DCSRRVTVGPFHWHVQDMGPTAGPLLLLLHGTGAST-HSWRDLMPPLAR-SFRVVAPDL-PGHGFTRAPFR------FRF 76 (278)
T ss_pred CccceeeECCEEEEEEecCCCCCCeEEEEcCCCCCH-HHHHHHHHHHhh-CcEEEeecC-CCCCCCCCccc------cCC
Confidence 45667788888877654332 358899999987764 567888888866 699999999 89987643211 012
Q ss_pred CCCcchhcHHHHHHHHHhcCCceEEEEEeeccHHHHHHcc-CCc-CceEEEEeccCCc----------------------
Q 026476 97 GVDKGFEEAKPVIQALKSKGITAIGAAGFCWGAKVVVQLG-KRE-FIQAAVLLHPSFV---------------------- 152 (238)
Q Consensus 97 ~~~~~~~d~~~~~~~l~~~~~~~i~l~G~S~GG~~a~~~a-~~~-~i~a~i~~~~~~~---------------------- 152 (238)
..+...+|+.+++ ++.+.+++.++||||||.+++.++ ..+ .+++++++.+...
T Consensus 77 ~~~~~~~~l~~~i---~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (278)
T TIGR03056 77 TLPSMAEDLSALC---AAEGLSPDGVIGHSAGAAIALRLALDGPVTPRMVVGINAALMPFEGMAGTLFPYMARVLACNPF 153 (278)
T ss_pred CHHHHHHHHHHHH---HHcCCCCceEEEECccHHHHHHHHHhCCcccceEEEEcCcccccccccccccchhhHhhhhccc
Confidence 2233344444444 344567899999999999999987 444 3665655432110
Q ss_pred --------------------------C--------------------------------cccccccCCcEEEEecCCCCC
Q 026476 153 --------------------------T--------------------------------VDDIKGVEVPLSILGAEIDRL 174 (238)
Q Consensus 153 --------------------------~--------------------------------~~~~~~~~~P~L~i~g~~D~~ 174 (238)
. ...+.++++|+|+++|++|.+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~g~~D~~ 233 (278)
T TIGR03056 154 TPPMMSRGAADQQRVERLIRDTGSLLDKAGMTYYGRLIRSPAHVDGALSMMAQWDLAPLNRDLPRITIPLHLIAGEEDKA 233 (278)
T ss_pred chHHHHhhcccCcchhHHhhccccccccchhhHHHHhhcCchhhhHHHHHhhcccccchhhhcccCCCCEEEEEeCCCcc
Confidence 0 001234678999999999999
Q ss_pred CCHHhHHHHHHHHhhcCCCCceEEEcCCCCeeeeecCCCCCHHHHHHHHHHHHHHHHHHH
Q 026476 175 SPPALVKEFEEALNAKSGVDSFVKIFPKVAHGWTVRYNVEDETAVKAAEEAHHNLLEWFA 234 (238)
Q Consensus 175 ~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~ 234 (238)
+|++..+.+.+.+. +.++..+++++|.+... ..++..+.+.+||+
T Consensus 234 vp~~~~~~~~~~~~-----~~~~~~~~~~gH~~~~e----------~p~~~~~~i~~f~~ 278 (278)
T TIGR03056 234 VPPDESKRAATRVP-----TATLHVVPGGGHLVHEE----------QADGVVGLILQAAE 278 (278)
T ss_pred cCHHHHHHHHHhcc-----CCeEEEECCCCCccccc----------CHHHHHHHHHHHhC
Confidence 99998888877652 45688899999988653 23678888888874
No 25
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=99.83 E-value=3.2e-19 Score=144.15 Aligned_cols=187 Identities=12% Similarity=0.149 Sum_probs=129.0
Q ss_pred eEEeeCCeeEEEec-C-CCCCeeEEEEeccCCCCCchHHHHHHHHHHCCCEEEeccCCCCCccCCCCCcchHhhHhhcCC
Q 026476 21 HVEKLGGLNAYVTG-S-PDSKLAVLLISDVYGYEAPNLRKLADKVAAAGFYVAVPDFFHGDPYVADGGKPLQEWIKDHGV 98 (238)
Q Consensus 21 ~~~~~~~~~~~~~~-p-~~~~~~vl~~hg~~g~~~~~~~~~a~~l~~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~ 98 (238)
++.++++....+.. . ....++|||+||+.+.. ..+..+++.|.+ +|.|+++|+ +|+|.+..... ..+.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~plvllHG~~~~~-~~w~~~~~~L~~-~~~vi~~Dl-~G~G~S~~~~~-------~~~~ 74 (276)
T TIGR02240 5 RTIDLDGQSIRTAVRPGKEGLTPLLIFNGIGANL-ELVFPFIEALDP-DLEVIAFDV-PGVGGSSTPRH-------PYRF 74 (276)
T ss_pred EEeccCCcEEEEEEecCCCCCCcEEEEeCCCcch-HHHHHHHHHhcc-CceEEEECC-CCCCCCCCCCC-------cCcH
Confidence 34455665554432 2 22347899999977664 567888888865 699999999 99987753210 1233
Q ss_pred CcchhcHHHHHHHHHhcCCceEEEEEeeccHHHHHHccC-Cc-CceEEEEeccCCc------------------------
Q 026476 99 DKGFEEAKPVIQALKSKGITAIGAAGFCWGAKVVVQLGK-RE-FIQAAVLLHPSFV------------------------ 152 (238)
Q Consensus 99 ~~~~~d~~~~~~~l~~~~~~~i~l~G~S~GG~~a~~~a~-~~-~i~a~i~~~~~~~------------------------ 152 (238)
+...+|+.++++.+ +.+++.++||||||.+++.+|. .| .+++.|++.+...
T Consensus 75 ~~~~~~~~~~i~~l---~~~~~~LvG~S~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (276)
T TIGR02240 75 PGLAKLAARMLDYL---DYGQVNAIGVSWGGALAQQFAHDYPERCKKLILAATAAGAVMVPGKPKVLMMMASPRRYIQPS 151 (276)
T ss_pred HHHHHHHHHHHHHh---CcCceEEEEECHHHHHHHHHHHHCHHHhhheEEeccCCccccCCCchhHHHHhcCchhhhccc
Confidence 44556666666655 5678999999999999999883 33 4555555432100
Q ss_pred ----------------C-------------------------------cccccccCCcEEEEecCCCCCCCHHhHHHHHH
Q 026476 153 ----------------T-------------------------------VDDIKGVEVPLSILGAEIDRLSPPALVKEFEE 185 (238)
Q Consensus 153 ----------------~-------------------------------~~~~~~~~~P~L~i~g~~D~~~p~~~~~~~~~ 185 (238)
. ...+.++++|+|+|+|++|+++|++..+++.+
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~v~~~~~~~l~~ 231 (276)
T TIGR02240 152 HGIHIAPDIYGGAFRRDPELAMAHASKVRSGGKLGYYWQLFAGLGWTSIHWLHKIQQPTLVLAGDDDPIIPLINMRLLAW 231 (276)
T ss_pred cccchhhhhccceeeccchhhhhhhhhcccCCCchHHHHHHHHcCCchhhHhhcCCCCEEEEEeCCCCcCCHHHHHHHHH
Confidence 0 01145778999999999999999999998888
Q ss_pred HHhhcCCCCceEEEcCCCCeeeeecCCCCCHHHHHHHHHHHHHHHHHHHHh
Q 026476 186 ALNAKSGVDSFVKIFPKVAHGWTVRYNVEDETAVKAAEEAHHNLLEWFAKY 236 (238)
Q Consensus 186 ~~~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~ 236 (238)
.+. +.+++++++ +|..... ..++..+.+.+|+.+.
T Consensus 232 ~~~-----~~~~~~i~~-gH~~~~e----------~p~~~~~~i~~fl~~~ 266 (276)
T TIGR02240 232 RIP-----NAELHIIDD-GHLFLIT----------RAEAVAPIIMKFLAEE 266 (276)
T ss_pred hCC-----CCEEEEEcC-CCchhhc----------cHHHHHHHHHHHHHHh
Confidence 762 346778885 9976543 2367888899998864
No 26
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.82 E-value=5.5e-19 Score=146.30 Aligned_cols=191 Identities=14% Similarity=0.163 Sum_probs=131.6
Q ss_pred eeEEEecCCCCCeeEEEEeccCCCCC-ch--------------------H----HHHHHHHHHCCCEEEeccCCCCCccC
Q 026476 28 LNAYVTGSPDSKLAVLLISDVYGYEA-PN--------------------L----RKLADKVAAAGFYVAVPDFFHGDPYV 82 (238)
Q Consensus 28 ~~~~~~~p~~~~~~vl~~hg~~g~~~-~~--------------------~----~~~a~~l~~~G~~v~~~d~~~g~~~~ 82 (238)
+..+.+.|+.++..|+++||..+... .. | ..+++.|+++||.|+++|+ +|+|.+
T Consensus 10 l~~~~~~~~~~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~~~G~~V~~~D~-rGHG~S 88 (332)
T TIGR01607 10 LKTYSWIVKNAIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFNKNGYSVYGLDL-QGHGES 88 (332)
T ss_pred EEEeeeeccCCeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHHHCCCcEEEecc-cccCCC
Confidence 45555566555567778888655321 11 1 4689999999999999999 999877
Q ss_pred CCCCcchHhhHhhcCCCcchhcHHHHHHHHHh-------------------c-C-CceEEEEEeeccHHHHHHccC-C--
Q 026476 83 ADGGKPLQEWIKDHGVDKGFEEAKPVIQALKS-------------------K-G-ITAIGAAGFCWGAKVVVQLGK-R-- 138 (238)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~-------------------~-~-~~~i~l~G~S~GG~~a~~~a~-~-- 138 (238)
.+..... ... ...+..++|+..+++.+++ . . ..++.++||||||.+++.++. .
T Consensus 89 ~~~~~~~-g~~--~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i~~~~~~~~~~ 165 (332)
T TIGR01607 89 DGLQNLR-GHI--NCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNIALRLLELLGK 165 (332)
T ss_pred ccccccc-cch--hhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHHHHHHHHHhcc
Confidence 5421100 010 1335577888888887764 1 2 458999999999999998652 1
Q ss_pred -------cCceEEEEeccCCc--------------------------------Cc-------------------------
Q 026476 139 -------EFIQAAVLLHPSFV--------------------------------TV------------------------- 154 (238)
Q Consensus 139 -------~~i~a~i~~~~~~~--------------------------------~~------------------------- 154 (238)
..++++|++.|.+. ..
T Consensus 166 ~~~~~~~~~i~g~i~~s~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~Dp~~~~~~~ 245 (332)
T TIGR01607 166 SNENNDKLNIKGCISLSGMISIKSVGSDDSFKFKYFYLPVMNFMSRVFPTFRISKKIRYEKSPYVNDIIKFDKFRYDGGI 245 (332)
T ss_pred ccccccccccceEEEeccceEEecccCCCcchhhhhHHHHHHHHHHHCCcccccCccccccChhhhhHHhcCccccCCcc
Confidence 14677765543210 00
Q ss_pred ----------------cccccc--CCcEEEEecCCCCCCCHHhHHHHHHHHhhcCCCCceEEEcCCCCeeeeecCCCCCH
Q 026476 155 ----------------DDIKGV--EVPLSILGAEIDRLSPPALVKEFEEALNAKSGVDSFVKIFPKVAHGWTVRYNVEDE 216 (238)
Q Consensus 155 ----------------~~~~~~--~~P~L~i~g~~D~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~H~~~~~~~~~~~ 216 (238)
..+..+ ++|+|+++|++|.+++++.++.+++.+. . .+.++++|++++|.+.....
T Consensus 246 s~~~~~~l~~~~~~~~~~~~~i~~~~P~Lii~G~~D~vv~~~~~~~~~~~~~-~--~~~~l~~~~g~~H~i~~E~~---- 318 (332)
T TIGR01607 246 TFNLASELIKATDTLDCDIDYIPKDIPILFIHSKGDCVCSYEGTVSFYNKLS-I--SNKELHTLEDMDHVITIEPG---- 318 (332)
T ss_pred cHHHHHHHHHHHHHHHhhHhhCCCCCCEEEEEeCCCCccCHHHHHHHHHhcc-C--CCcEEEEECCCCCCCccCCC----
Confidence 002334 6899999999999999999998887652 1 25678999999999987533
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 026476 217 TAVKAAEEAHHNLLEWFA 234 (238)
Q Consensus 217 ~~~~~~~~~~~~~~~fl~ 234 (238)
.+++++.+.+||+
T Consensus 319 -----~~~v~~~i~~wL~ 331 (332)
T TIGR01607 319 -----NEEVLKKIIEWIS 331 (332)
T ss_pred -----HHHHHHHHHHHhh
Confidence 3678899999986
No 27
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.82 E-value=6.3e-19 Score=139.88 Aligned_cols=171 Identities=18% Similarity=0.213 Sum_probs=119.9
Q ss_pred CCCeeEEEEeccCCCCCchHHHHHHHHHHCCCEEEeccCCCCCccCCCCCcchHhhHhhcCCCcchhcHHHHHHHHHhcC
Q 026476 37 DSKLAVLLISDVYGYEAPNLRKLADKVAAAGFYVAVPDFFHGDPYVADGGKPLQEWIKDHGVDKGFEEAKPVIQALKSKG 116 (238)
Q Consensus 37 ~~~~~vl~~hg~~g~~~~~~~~~a~~l~~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~ 116 (238)
.+.|+||++||+.+.. ..+..++..|.+ +|.|+++|+ +|+|.+..... .....+...+++.++++. .+
T Consensus 11 ~~~~~iv~lhG~~~~~-~~~~~~~~~l~~-~~~vi~~D~-~G~G~S~~~~~------~~~~~~~~~~~~~~~i~~---~~ 78 (257)
T TIGR03611 11 ADAPVVVLSSGLGGSG-SYWAPQLDVLTQ-RFHVVTYDH-RGTGRSPGELP------PGYSIAHMADDVLQLLDA---LN 78 (257)
T ss_pred CCCCEEEEEcCCCcch-hHHHHHHHHHHh-ccEEEEEcC-CCCCCCCCCCc------ccCCHHHHHHHHHHHHHH---hC
Confidence 3467899999987764 567777777764 799999999 89987653210 112223344455555443 45
Q ss_pred CceEEEEEeeccHHHHHHcc-CCc-CceEEEEeccCCcC-----------------------------------------
Q 026476 117 ITAIGAAGFCWGAKVVVQLG-KRE-FIQAAVLLHPSFVT----------------------------------------- 153 (238)
Q Consensus 117 ~~~i~l~G~S~GG~~a~~~a-~~~-~i~a~i~~~~~~~~----------------------------------------- 153 (238)
..++.++||||||.+++.++ ..+ .++++|++.+....
T Consensus 79 ~~~~~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (257)
T TIGR03611 79 IERFHFVGHALGGLIGLQLALRYPERLLSLVLINAWSRPDPHTRRCFDVRIALLQHAGPEAYVHAQALFLYPADWISENA 158 (257)
T ss_pred CCcEEEEEechhHHHHHHHHHHChHHhHHheeecCCCCCChhHHHHHHHHHHHHhccCcchhhhhhhhhhccccHhhccc
Confidence 67899999999999999987 333 46666655431000
Q ss_pred --------------------------------cccccccCCcEEEEecCCCCCCCHHhHHHHHHHHhhcCCCCceEEEcC
Q 026476 154 --------------------------------VDDIKGVEVPLSILGAEIDRLSPPALVKEFEEALNAKSGVDSFVKIFP 201 (238)
Q Consensus 154 --------------------------------~~~~~~~~~P~L~i~g~~D~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (238)
...+.++++|+|+++|++|.++|++..+++.+.++ +.+++.++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~-----~~~~~~~~ 233 (257)
T TIGR03611 159 ARLAADEAHALAHFPGKANVLRRINALEAFDVSARLDRIQHPVLLIANRDDMLVPYTQSLRLAAALP-----NAQLKLLP 233 (257)
T ss_pred hhhhhhhhhcccccCccHHHHHHHHHHHcCCcHHHhcccCccEEEEecCcCcccCHHHHHHHHHhcC-----CceEEEEC
Confidence 01144678999999999999999999888887662 34678899
Q ss_pred CCCeeeeecCCCCCHHHHHHHHHHHHHHHHHHH
Q 026476 202 KVAHGWTVRYNVEDETAVKAAEEAHHNLLEWFA 234 (238)
Q Consensus 202 g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~ 234 (238)
+++|.+... ..++..+.+.+||+
T Consensus 234 ~~gH~~~~~----------~~~~~~~~i~~fl~ 256 (257)
T TIGR03611 234 YGGHASNVT----------DPETFNRALLDFLK 256 (257)
T ss_pred CCCCCcccc----------CHHHHHHHHHHHhc
Confidence 999987653 23678888999986
No 28
>PRK10673 acyl-CoA esterase; Provisional
Probab=99.81 E-value=1.2e-18 Score=138.99 Aligned_cols=170 Identities=14% Similarity=0.143 Sum_probs=124.3
Q ss_pred CCeeEEEEeccCCCCCchHHHHHHHHHHCCCEEEeccCCCCCccCCCCCcchHhhHhhcCCCcchhcHHHHHHHHHhcCC
Q 026476 38 SKLAVLLISDVYGYEAPNLRKLADKVAAAGFYVAVPDFFHGDPYVADGGKPLQEWIKDHGVDKGFEEAKPVIQALKSKGI 117 (238)
Q Consensus 38 ~~~~vl~~hg~~g~~~~~~~~~a~~l~~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~ 117 (238)
.+|+||++||..++. ..+..++..|++ +|.|+++|+ +|+|.+... ...+.++..+|+.++++.+ +.
T Consensus 15 ~~~~iv~lhG~~~~~-~~~~~~~~~l~~-~~~vi~~D~-~G~G~s~~~--------~~~~~~~~~~d~~~~l~~l---~~ 80 (255)
T PRK10673 15 NNSPIVLVHGLFGSL-DNLGVLARDLVN-DHDIIQVDM-RNHGLSPRD--------PVMNYPAMAQDLLDTLDAL---QI 80 (255)
T ss_pred CCCCEEEECCCCCch-hHHHHHHHHHhh-CCeEEEECC-CCCCCCCCC--------CCCCHHHHHHHHHHHHHHc---CC
Confidence 458999999988774 567888888865 699999999 898866432 1123344556677666654 55
Q ss_pred ceEEEEEeeccHHHHHHcc-CCc-CceEEEEeccCCc----------------------C--------------c-----
Q 026476 118 TAIGAAGFCWGAKVVVQLG-KRE-FIQAAVLLHPSFV----------------------T--------------V----- 154 (238)
Q Consensus 118 ~~i~l~G~S~GG~~a~~~a-~~~-~i~a~i~~~~~~~----------------------~--------------~----- 154 (238)
.++.++||||||.+++.++ ..+ .+++++++.+... . .
T Consensus 81 ~~~~lvGhS~Gg~va~~~a~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (255)
T PRK10673 81 EKATFIGHSMGGKAVMALTALAPDRIDKLVAIDIAPVDYHVRRHDEIFAAINAVSEAGATTRQQAAAIMRQHLNEEGVIQ 160 (255)
T ss_pred CceEEEEECHHHHHHHHHHHhCHhhcceEEEEecCCCCccchhhHHHHHHHHHhhhcccccHHHHHHHHHHhcCCHHHHH
Confidence 6899999999999999987 334 6888887632100 0 0
Q ss_pred ----------------------------ccccccCCcEEEEecCCCCCCCHHhHHHHHHHHhhcCCCCceEEEcCCCCee
Q 026476 155 ----------------------------DDIKGVEVPLSILGAEIDRLSPPALVKEFEEALNAKSGVDSFVKIFPKVAHG 206 (238)
Q Consensus 155 ----------------------------~~~~~~~~P~L~i~g~~D~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~H~ 206 (238)
+.++++++|+|+|+|++|+.++++..+.+.+.+. +.++.++++++|.
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~-----~~~~~~~~~~gH~ 235 (255)
T PRK10673 161 FLLKSFVDGEWRFNVPVLWDQYPHIVGWEKIPAWPHPALFIRGGNSPYVTEAYRDDLLAQFP-----QARAHVIAGAGHW 235 (255)
T ss_pred HHHhcCCcceeEeeHHHHHHhHHHHhCCcccCCCCCCeEEEECCCCCCCCHHHHHHHHHhCC-----CcEEEEeCCCCCe
Confidence 0123457899999999999999988888877652 4568889999997
Q ss_pred eeecCCCCCHHHHHHHHHHHHHHHHHHHHh
Q 026476 207 WTVRYNVEDETAVKAAEEAHHNLLEWFAKY 236 (238)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~ 236 (238)
.... ..++..+.+.+||+++
T Consensus 236 ~~~~----------~p~~~~~~l~~fl~~~ 255 (255)
T PRK10673 236 VHAE----------KPDAVLRAIRRYLNDK 255 (255)
T ss_pred eecc----------CHHHHHHHHHHHHhcC
Confidence 7553 2357888899999763
No 29
>PRK03592 haloalkane dehalogenase; Provisional
Probab=99.81 E-value=4.6e-18 Score=138.70 Aligned_cols=188 Identities=12% Similarity=0.149 Sum_probs=130.2
Q ss_pred eEEeeCCeeEEEecCCCCCeeEEEEeccCCCCCchHHHHHHHHHHCCCEEEeccCCCCCccCCCCCcchHhhHhhcCCCc
Q 026476 21 HVEKLGGLNAYVTGSPDSKLAVLLISDVYGYEAPNLRKLADKVAAAGFYVAVPDFFHGDPYVADGGKPLQEWIKDHGVDK 100 (238)
Q Consensus 21 ~~~~~~~~~~~~~~p~~~~~~vl~~hg~~g~~~~~~~~~a~~l~~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~ 100 (238)
...+.++...++..- +++++||++||..++. ..++.+++.|++.+ .|+++|+ +|+|.+..... .++...
T Consensus 10 ~~~~~~g~~i~y~~~-G~g~~vvllHG~~~~~-~~w~~~~~~L~~~~-~via~D~-~G~G~S~~~~~-------~~~~~~ 78 (295)
T PRK03592 10 RRVEVLGSRMAYIET-GEGDPIVFLHGNPTSS-YLWRNIIPHLAGLG-RCLAPDL-IGMGASDKPDI-------DYTFAD 78 (295)
T ss_pred eEEEECCEEEEEEEe-CCCCEEEEECCCCCCH-HHHHHHHHHHhhCC-EEEEEcC-CCCCCCCCCCC-------CCCHHH
Confidence 344667777665543 3568999999987764 67789999998885 9999999 99987754211 122233
Q ss_pred chhcHHHHHHHHHhcCCceEEEEEeeccHHHHHHcc-CCc-CceEEEEeccCCc-------C------------------
Q 026476 101 GFEEAKPVIQALKSKGITAIGAAGFCWGAKVVVQLG-KRE-FIQAAVLLHPSFV-------T------------------ 153 (238)
Q Consensus 101 ~~~d~~~~~~~l~~~~~~~i~l~G~S~GG~~a~~~a-~~~-~i~a~i~~~~~~~-------~------------------ 153 (238)
..+|+.++++. .+.+++.++||||||.+++.++ ..| .++++|++.+... .
T Consensus 79 ~a~dl~~ll~~---l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (295)
T PRK03592 79 HARYLDAWFDA---LGLDDVVLVGHDWGSALGFDWAARHPDRVRGIAFMEAIVRPMTWDDFPPAVRELFQALRSPGEGEE 155 (295)
T ss_pred HHHHHHHHHHH---hCCCCeEEEEECHHHHHHHHHHHhChhheeEEEEECCCCCCcchhhcchhHHHHHHHHhCcccccc
Confidence 44555555544 4668999999999999999988 444 5777776553100 0
Q ss_pred --------------c---------------------------------------------------ccccccCCcEEEEe
Q 026476 154 --------------V---------------------------------------------------DDIKGVEVPLSILG 168 (238)
Q Consensus 154 --------------~---------------------------------------------------~~~~~~~~P~L~i~ 168 (238)
. ..+.++++|+|+|+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~ 235 (295)
T PRK03592 156 MVLEENVFIERVLPGSILRPLSDEEMAVYRRPFPTPESRRPTLSWPRELPIDGEPADVVALVEEYAQWLATSDVPKLLIN 235 (295)
T ss_pred cccchhhHHhhcccCcccccCCHHHHHHHHhhcCCchhhhhhhhhhhhcCCCCcchhhHhhhhHhHHHhccCCCCeEEEe
Confidence 0 00234688999999
Q ss_pred cCCCCCCCHHhHHHHHHHHhhcCCCCceEEEcCCCCeeeeecCCCCCHHHHHHHHHHHHHHHHHHHHh
Q 026476 169 AEIDRLSPPALVKEFEEALNAKSGVDSFVKIFPKVAHGWTVRYNVEDETAVKAAEEAHHNLLEWFAKY 236 (238)
Q Consensus 169 g~~D~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~ 236 (238)
|++|.++++....++...+.. +.+++++++++|..... ..++..+.+.+||++.
T Consensus 236 G~~D~~~~~~~~~~~~~~~~~----~~~~~~i~~~gH~~~~e----------~p~~v~~~i~~fl~~~ 289 (295)
T PRK03592 236 AEPGAILTTGAIRDWCRSWPN----QLEITVFGAGLHFAQED----------SPEEIGAAIAAWLRRL 289 (295)
T ss_pred ccCCcccCcHHHHHHHHHhhh----hcceeeccCcchhhhhc----------CHHHHHHHHHHHHHHh
Confidence 999999955555454443211 45688999999998753 2367888999999875
No 30
>PLN02965 Probable pheophorbidase
Probab=99.80 E-value=4.3e-18 Score=136.03 Aligned_cols=169 Identities=15% Similarity=0.092 Sum_probs=119.1
Q ss_pred eEEEEeccCCCCCchHHHHHHHHHHCCCEEEeccCCCCCccCCCCCcchHhhHhhcCCCcchhcHHHHHHHHHhcCC-ce
Q 026476 41 AVLLISDVYGYEAPNLRKLADKVAAAGFYVAVPDFFHGDPYVADGGKPLQEWIKDHGVDKGFEEAKPVIQALKSKGI-TA 119 (238)
Q Consensus 41 ~vl~~hg~~g~~~~~~~~~a~~l~~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~-~~ 119 (238)
.|||+||+++.. ..+..++..|++.||.|+++|+ +|+|.+..... ...+.+...+|+.++++.+ +. .+
T Consensus 5 ~vvllHG~~~~~-~~w~~~~~~L~~~~~~via~Dl-~G~G~S~~~~~------~~~~~~~~a~dl~~~l~~l---~~~~~ 73 (255)
T PLN02965 5 HFVFVHGASHGA-WCWYKLATLLDAAGFKSTCVDL-TGAGISLTDSN------TVSSSDQYNRPLFALLSDL---PPDHK 73 (255)
T ss_pred EEEEECCCCCCc-CcHHHHHHHHhhCCceEEEecC-CcCCCCCCCcc------ccCCHHHHHHHHHHHHHhc---CCCCC
Confidence 589999987664 5678999999988999999999 99987753210 0112233455566665544 44 49
Q ss_pred EEEEEeeccHHHHHHccC-Cc-CceEEEEeccCC-----------------------------c--C-------------
Q 026476 120 IGAAGFCWGAKVVVQLGK-RE-FIQAAVLLHPSF-----------------------------V--T------------- 153 (238)
Q Consensus 120 i~l~G~S~GG~~a~~~a~-~~-~i~a~i~~~~~~-----------------------------~--~------------- 153 (238)
+.++||||||.+++.++. .| .++++|++.+.. . .
T Consensus 74 ~~lvGhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (255)
T PLN02965 74 VILVGHSIGGGSVTEALCKFTDKISMAIYVAAAMVKPGSIISPRLKNVMEGTEKIWDYTFGEGPDKPPTGIMMKPEFVRH 153 (255)
T ss_pred EEEEecCcchHHHHHHHHhCchheeEEEEEccccCCCCCCccHHHHhhhhccccceeeeeccCCCCCcchhhcCHHHHHH
Confidence 999999999999999873 33 566666543210 0 0
Q ss_pred -------------------c-------------ccccccCCcEEEEecCCCCCCCHHhHHHHHHHHhhcCCCCceEEEcC
Q 026476 154 -------------------V-------------DDIKGVEVPLSILGAEIDRLSPPALVKEFEEALNAKSGVDSFVKIFP 201 (238)
Q Consensus 154 -------------------~-------------~~~~~~~~P~L~i~g~~D~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (238)
. ..+..+++|+|+++|++|..+|++..+.+.+.+. +.++++++
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vP~lvi~g~~D~~~~~~~~~~~~~~~~-----~a~~~~i~ 228 (255)
T PLN02965 154 YYYNQSPLEDYTLSSKLLRPAPVRAFQDLDKLPPNPEAEKVPRVYIKTAKDNLFDPVRQDVMVENWP-----PAQTYVLE 228 (255)
T ss_pred HHhcCCCHHHHHHHHHhcCCCCCcchhhhhhccchhhcCCCCEEEEEcCCCCCCCHHHHHHHHHhCC-----cceEEEec
Confidence 0 0012478999999999999999998888888762 35688899
Q ss_pred CCCeeeeecCCCCCHHHHHHHHHHHHHHHHHHHH
Q 026476 202 KVAHGWTVRYNVEDETAVKAAEEAHHNLLEWFAK 235 (238)
Q Consensus 202 g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~ 235 (238)
+++|...... .+++.+.+.+|++.
T Consensus 229 ~~GH~~~~e~----------p~~v~~~l~~~~~~ 252 (255)
T PLN02965 229 DSDHSAFFSV----------PTTLFQYLLQAVSS 252 (255)
T ss_pred CCCCchhhcC----------HHHHHHHHHHHHHH
Confidence 9999987643 34566666666554
No 31
>PRK10349 carboxylesterase BioH; Provisional
Probab=99.80 E-value=2.1e-18 Score=137.80 Aligned_cols=162 Identities=19% Similarity=0.174 Sum_probs=115.2
Q ss_pred eeEEEEeccCCCCCchHHHHHHHHHHCCCEEEeccCCCCCccCCCCCcchHhhHhhcCCCcchhcHHHHHHHHHhcCCce
Q 026476 40 LAVLLISDVYGYEAPNLRKLADKVAAAGFYVAVPDFFHGDPYVADGGKPLQEWIKDHGVDKGFEEAKPVIQALKSKGITA 119 (238)
Q Consensus 40 ~~vl~~hg~~g~~~~~~~~~a~~l~~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~ 119 (238)
|+||++||+.++. ..+..+...|.+. |.|+++|+ +|+|.+.... .. .+.+.++.+.+...++
T Consensus 14 ~~ivllHG~~~~~-~~w~~~~~~L~~~-~~vi~~Dl-~G~G~S~~~~--------~~-------~~~~~~~~l~~~~~~~ 75 (256)
T PRK10349 14 VHLVLLHGWGLNA-EVWRCIDEELSSH-FTLHLVDL-PGFGRSRGFG--------AL-------SLADMAEAVLQQAPDK 75 (256)
T ss_pred CeEEEECCCCCCh-hHHHHHHHHHhcC-CEEEEecC-CCCCCCCCCC--------CC-------CHHHHHHHHHhcCCCC
Confidence 4699999976664 6778899999765 99999999 9998775310 01 1222333333445679
Q ss_pred EEEEEeeccHHHHHHccC-Cc-CceEEEEeccCCc---------------------------------------C-----
Q 026476 120 IGAAGFCWGAKVVVQLGK-RE-FIQAAVLLHPSFV---------------------------------------T----- 153 (238)
Q Consensus 120 i~l~G~S~GG~~a~~~a~-~~-~i~a~i~~~~~~~---------------------------------------~----- 153 (238)
+.++||||||.+++.++. .| .+++.|++.+... .
T Consensus 76 ~~lvGhS~Gg~ia~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (256)
T PRK10349 76 AIWLGWSLGGLVASQIALTHPERVQALVTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDFQRTVERFLALQTMGTETAR 155 (256)
T ss_pred eEEEEECHHHHHHHHHHHhChHhhheEEEecCccceecCCCCCcccHHHHHHHHHHHHhchHHHHHHHHHHHHccCchHH
Confidence 999999999999999883 33 6777776543100 0
Q ss_pred ---------------------------------cccccccCCcEEEEecCCCCCCCHHhHHHHHHHHhhcCCCCceEEEc
Q 026476 154 ---------------------------------VDDIKGVEVPLSILGAEIDRLSPPALVKEFEEALNAKSGVDSFVKIF 200 (238)
Q Consensus 154 ---------------------------------~~~~~~~~~P~L~i~g~~D~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 200 (238)
.+.+.++++|+|+++|++|.++|.+..+.+.+.++ +.++.++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~i~-----~~~~~~i 230 (256)
T PRK10349 156 QDARALKKTVLALPMPEVDVLNGGLEILKTVDLRQPLQNVSMPFLRLYGYLDGLVPRKVVPMLDKLWP-----HSESYIF 230 (256)
T ss_pred HHHHHHHHHhhccCCCcHHHHHHHHHHHHhCccHHHHhhcCCCeEEEecCCCccCCHHHHHHHHHhCC-----CCeEEEe
Confidence 00145678999999999999999988887777662 5578899
Q ss_pred CCCCeeeeecCCCCCHHHHHHHHHHHHHHHHHHH
Q 026476 201 PKVAHGWTVRYNVEDETAVKAAEEAHHNLLEWFA 234 (238)
Q Consensus 201 ~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~ 234 (238)
++++|..... ..+...+.+.+|-+
T Consensus 231 ~~~gH~~~~e----------~p~~f~~~l~~~~~ 254 (256)
T PRK10349 231 AKAAHAPFIS----------HPAEFCHLLVALKQ 254 (256)
T ss_pred CCCCCCcccc----------CHHHHHHHHHHHhc
Confidence 9999988763 23566666776654
No 32
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=99.80 E-value=1.4e-18 Score=135.52 Aligned_cols=188 Identities=19% Similarity=0.251 Sum_probs=107.6
Q ss_pred ecCCC-CCeeEEEEeccCCCCCchHHHHHHH-HHHCCCEEEeccCCCCCccCCCCCcchHhhHhhcCC-----------C
Q 026476 33 TGSPD-SKLAVLLISDVYGYEAPNLRKLADK-VAAAGFYVAVPDFFHGDPYVADGGKPLQEWIKDHGV-----------D 99 (238)
Q Consensus 33 ~~p~~-~~~~vl~~hg~~g~~~~~~~~~a~~-l~~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~-----------~ 99 (238)
..|++ ..+.||++||.+++ ...+..+... +......++.|... ........+.....|++.... .
T Consensus 7 ~~~~~~~~~lvi~LHG~G~~-~~~~~~~~~~~~~~~~~~~i~p~ap-~~~~~~~~g~~~~~Wf~~~~~~~~~~~~~~~i~ 84 (216)
T PF02230_consen 7 IEPKGKAKPLVILLHGYGDS-EDLFALLAELNLALPNTRFISPRAP-SRPVTVPGGYRMPAWFDIYDFDPEGPEDEAGIE 84 (216)
T ss_dssp E--SST-SEEEEEE--TTS--HHHHHHHHHHHTCSTTEEEEEE----EEE-GGGTT-EEE-SS-BSCSSSSSEB-HHHHH
T ss_pred eCCCCCCceEEEEECCCCCC-cchhHHHHhhcccCCceEEEeccCC-CCCcccccccCCCceeeccCCCcchhhhHHHHH
Confidence 34544 45788889986444 3444333331 22236777777652 110000001111133322211 1
Q ss_pred cchhcHHHHHHHHHhc--CCceEEEEEeeccHHHHHHcc-CC-cCceEEEEeccCCcCccccc----c-cCCcEEEEecC
Q 026476 100 KGFEEAKPVIQALKSK--GITAIGAAGFCWGAKVVVQLG-KR-EFIQAAVLLHPSFVTVDDIK----G-VEVPLSILGAE 170 (238)
Q Consensus 100 ~~~~d~~~~~~~l~~~--~~~~i~l~G~S~GG~~a~~~a-~~-~~i~a~i~~~~~~~~~~~~~----~-~~~P~L~i~g~ 170 (238)
+..+.+.++++...+. +.++|.+.|||+||.+++.++ +. ..+.++|+++|......... . .+.|++++||+
T Consensus 85 ~s~~~l~~li~~~~~~~i~~~ri~l~GFSQGa~~al~~~l~~p~~~~gvv~lsG~~~~~~~~~~~~~~~~~~pi~~~hG~ 164 (216)
T PF02230_consen 85 ESAERLDELIDEEVAYGIDPSRIFLGGFSQGAAMALYLALRYPEPLAGVVALSGYLPPESELEDRPEALAKTPILIIHGD 164 (216)
T ss_dssp HHHHHHHHHHHHHHHTT--GGGEEEEEETHHHHHHHHHHHCTSSTSSEEEEES---TTGCCCHCCHCCCCTS-EEEEEET
T ss_pred HHHHHHHHHHHHHHHcCCChhheehhhhhhHHHHHHHHHHHcCcCcCEEEEeeccccccccccccccccCCCcEEEEecC
Confidence 1122233444433232 567999999999999999987 44 37899999988766443222 1 26799999999
Q ss_pred CCCCCCHHhHHHHHHHHhhcCCCCceEEEcCCCCeeeeecCCCCCHHHHHHHHHHHHHHHHHHHHhc
Q 026476 171 IDRLSPPALVKEFEEALNAKSGVDSFVKIFPKVAHGWTVRYNVEDETAVKAAEEAHHNLLEWFAKYV 237 (238)
Q Consensus 171 ~D~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~ 237 (238)
+|+++|.+.+++..+.+ ++.+.+++++.|+|++|.+. .+.++.+.+||++++
T Consensus 165 ~D~vvp~~~~~~~~~~L-~~~~~~v~~~~~~g~gH~i~--------------~~~~~~~~~~l~~~~ 216 (216)
T PF02230_consen 165 EDPVVPFEWAEKTAEFL-KAAGANVEFHEYPGGGHEIS--------------PEELRDLREFLEKHI 216 (216)
T ss_dssp T-SSSTHHHHHHHHHHH-HCTT-GEEEEEETT-SSS----------------HHHHHHHHHHHHHH-
T ss_pred CCCcccHHHHHHHHHHH-HhcCCCEEEEEcCCCCCCCC--------------HHHHHHHHHHHhhhC
Confidence 99999999999999999 56777899999999999984 468888999999874
No 33
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=99.80 E-value=1.6e-18 Score=129.52 Aligned_cols=185 Identities=18% Similarity=0.233 Sum_probs=142.7
Q ss_pred CeeEEEecCCCCCeeEEEEeccCCCCCchHHHHHHHHHHC-CCEEEeccCCCCCccCCCCCcchHhhHhhcCCCcchhcH
Q 026476 27 GLNAYVTGSPDSKLAVLLISDVYGYEAPNLRKLADKVAAA-GFYVAVPDFFHGDPYVADGGKPLQEWIKDHGVDKGFEEA 105 (238)
Q Consensus 27 ~~~~~~~~p~~~~~~vl~~hg~~g~~~~~~~~~a~~l~~~-G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~ 105 (238)
.+++|+...+...|+++++|+..|+- ......++.+..+ +..|+.+++ ||.|.+.+. ...+...-|.
T Consensus 66 tL~a~~~~~E~S~pTlLyfh~NAGNm-Ghr~~i~~~fy~~l~mnv~ivsY-RGYG~S~Gs----------psE~GL~lDs 133 (300)
T KOG4391|consen 66 TLDAYLMLSESSRPTLLYFHANAGNM-GHRLPIARVFYVNLKMNVLIVSY-RGYGKSEGS----------PSEEGLKLDS 133 (300)
T ss_pred eEeeeeecccCCCceEEEEccCCCcc-cchhhHHHHHHHHcCceEEEEEe-eccccCCCC----------ccccceeccH
Confidence 37888888777789999999988874 4445677766654 999999999 999887653 1224467899
Q ss_pred HHHHHHHHhc---CCceEEEEEeeccHHHHHHccCC--cCceEEEEeccC---------------------------CcC
Q 026476 106 KPVIQALKSK---GITAIGAAGFCWGAKVVVQLGKR--EFIQAAVLLHPS---------------------------FVT 153 (238)
Q Consensus 106 ~~~~~~l~~~---~~~~i~l~G~S~GG~~a~~~a~~--~~i~a~i~~~~~---------------------------~~~ 153 (238)
+++++++..+ +..+|.+.|.|.||..|+.+|++ +++.++|+-..- +.+
T Consensus 134 ~avldyl~t~~~~dktkivlfGrSlGGAvai~lask~~~ri~~~ivENTF~SIp~~~i~~v~p~~~k~i~~lc~kn~~~S 213 (300)
T KOG4391|consen 134 EAVLDYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSDRISAIIVENTFLSIPHMAIPLVFPFPMKYIPLLCYKNKWLS 213 (300)
T ss_pred HHHHHHHhcCccCCcceEEEEecccCCeeEEEeeccchhheeeeeeechhccchhhhhheeccchhhHHHHHHHHhhhcc
Confidence 9999999877 57799999999999999998854 367777653210 011
Q ss_pred cccccccCCcEEEEecCCCCCCCHHhHHHHHHHHhhcCCCCceEEEcCCCCeeeeecCCCCCHHHHHHHHHHHHHHHHHH
Q 026476 154 VDDIKGVEVPLSILGAEIDRLSPPALVKEFEEALNAKSGVDSFVKIFPKVAHGWTVRYNVEDETAVKAAEEAHHNLLEWF 233 (238)
Q Consensus 154 ~~~~~~~~~P~L~i~g~~D~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl 233 (238)
...+...+.|.|++.|.+|.++||-+.+.+++.+.+ ...++..||++.|.-+.-. +-.|+.+.+||
T Consensus 214 ~~ki~~~~~P~LFiSGlkDelVPP~~Mr~Ly~~c~S---~~Krl~eFP~gtHNDT~i~-----------dGYfq~i~dFl 279 (300)
T KOG4391|consen 214 YRKIGQCRMPFLFISGLKDELVPPVMMRQLYELCPS---RTKRLAEFPDGTHNDTWIC-----------DGYFQAIEDFL 279 (300)
T ss_pred hhhhccccCceEEeecCccccCCcHHHHHHHHhCch---hhhhheeCCCCccCceEEe-----------ccHHHHHHHHH
Confidence 223455678999999999999999999999998743 3667999999999876432 35889999999
Q ss_pred HHhc
Q 026476 234 AKYV 237 (238)
Q Consensus 234 ~~~~ 237 (238)
.+..
T Consensus 280 aE~~ 283 (300)
T KOG4391|consen 280 AEVV 283 (300)
T ss_pred HHhc
Confidence 8753
No 34
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=99.80 E-value=9.3e-18 Score=140.57 Aligned_cols=174 Identities=17% Similarity=0.142 Sum_probs=117.9
Q ss_pred CeeEEEEeccCCCCCchHHHHHHHHHHCCCEEEeccCCCCCccCCCCCcchHhhHhhcCCCcchhcHHHHHHHHHhcCCc
Q 026476 39 KLAVLLISDVYGYEAPNLRKLADKVAAAGFYVAVPDFFHGDPYVADGGKPLQEWIKDHGVDKGFEEAKPVIQALKSKGIT 118 (238)
Q Consensus 39 ~~~vl~~hg~~g~~~~~~~~~a~~l~~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~ 118 (238)
.|+|||+||+.+.. ..+..++..|++ +|.|+++|+ +|+|.+...... .++.+...+++.++++ +.+.+
T Consensus 88 gp~lvllHG~~~~~-~~w~~~~~~L~~-~~~via~Dl-~G~G~S~~~~~~------~~~~~~~a~~l~~~l~---~l~~~ 155 (360)
T PLN02679 88 GPPVLLVHGFGASI-PHWRRNIGVLAK-NYTVYAIDL-LGFGASDKPPGF------SYTMETWAELILDFLE---EVVQK 155 (360)
T ss_pred CCeEEEECCCCCCH-HHHHHHHHHHhc-CCEEEEECC-CCCCCCCCCCCc------cccHHHHHHHHHHHHH---HhcCC
Confidence 37899999987764 567888888876 799999999 999876432100 1122233444444444 44667
Q ss_pred eEEEEEeeccHHHHHHccC--Cc-CceEEEEeccCCc-------------------------------------------
Q 026476 119 AIGAAGFCWGAKVVVQLGK--RE-FIQAAVLLHPSFV------------------------------------------- 152 (238)
Q Consensus 119 ~i~l~G~S~GG~~a~~~a~--~~-~i~a~i~~~~~~~------------------------------------------- 152 (238)
++.++||||||.+++.++. .| .+++.|++.+...
T Consensus 156 ~~~lvGhS~Gg~ia~~~a~~~~P~rV~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (360)
T PLN02679 156 PTVLIGNSVGSLACVIAASESTRDLVRGLVLLNCAGGMNNKAVVDDWRIKLLLPLLWLIDFLLKQRGIASALFNRVKQRD 235 (360)
T ss_pred CeEEEEECHHHHHHHHHHHhcChhhcCEEEEECCccccccccccchHHHhhhcchHHHHHHHhhchhhHHHHHHHhcCHH
Confidence 9999999999999988663 33 5777776542100
Q ss_pred -----------Cc-------------------------------------ccccccCCcEEEEecCCCCCCCHHhH-HHH
Q 026476 153 -----------TV-------------------------------------DDIKGVEVPLSILGAEIDRLSPPALV-KEF 183 (238)
Q Consensus 153 -----------~~-------------------------------------~~~~~~~~P~L~i~g~~D~~~p~~~~-~~~ 183 (238)
.. ..+.++++|+|+|+|++|.++|++.. .+.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PtLii~G~~D~~~p~~~~~~~~ 315 (360)
T PLN02679 236 NLKNILLSVYGNKEAVDDELVEIIRGPADDEGALDAFVSIVTGPPGPNPIKLIPRISLPILVLWGDQDPFTPLDGPVGKY 315 (360)
T ss_pred HHHHHHHHhccCcccCCHHHHHHHHhhccCCChHHHHHHHHhcCCCCCHHHHhhhcCCCEEEEEeCCCCCcCchhhHHHH
Confidence 00 01345788999999999999988742 223
Q ss_pred HHHHhhcCCCCceEEEcCCCCeeeeecCCCCCHHHHHHHHHHHHHHHHHHHH
Q 026476 184 EEALNAKSGVDSFVKIFPKVAHGWTVRYNVEDETAVKAAEEAHHNLLEWFAK 235 (238)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~ 235 (238)
.+.+.+ .-.+.+++++++++|....+ ..++..+.+.+||++
T Consensus 316 ~~~l~~-~ip~~~l~~i~~aGH~~~~E----------~Pe~~~~~I~~FL~~ 356 (360)
T PLN02679 316 FSSLPS-QLPNVTLYVLEGVGHCPHDD----------RPDLVHEKLLPWLAQ 356 (360)
T ss_pred HHhhhc-cCCceEEEEcCCCCCCcccc----------CHHHHHHHHHHHHHh
Confidence 333322 12257899999999987653 346788899999976
No 35
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.79 E-value=1e-17 Score=139.93 Aligned_cols=196 Identities=17% Similarity=0.176 Sum_probs=135.7
Q ss_pred CceEE-eeCCeeEEEecCCC---CCeeEEEEeccCCCC----CchHHHHHHHHHHCCCEEEeccCCCCCccCCCCCcchH
Q 026476 19 AGHVE-KLGGLNAYVTGSPD---SKLAVLLISDVYGYE----APNLRKLADKVAAAGFYVAVPDFFHGDPYVADGGKPLQ 90 (238)
Q Consensus 19 ~~~~~-~~~~~~~~~~~p~~---~~~~vl~~hg~~g~~----~~~~~~~a~~l~~~G~~v~~~d~~~g~~~~~~~~~~~~ 90 (238)
.++++ +.+.+..+.+.|.. ..++||++|+..... ....+.+++.|+++||.|+++|+ +|.+.+.. ..
T Consensus 38 ~~~~v~~~~~~~l~~~~~~~~~~~~~pvl~v~~~~~~~~~~d~~~~~~~~~~L~~~G~~V~~~D~-~g~g~s~~-~~--- 112 (350)
T TIGR01836 38 PKEVVYREDKVVLYRYTPVKDNTHKTPLLIVYALVNRPYMLDLQEDRSLVRGLLERGQDVYLIDW-GYPDRADR-YL--- 112 (350)
T ss_pred CCceEEEcCcEEEEEecCCCCcCCCCcEEEeccccccceeccCCCCchHHHHHHHCCCeEEEEeC-CCCCHHHh-cC---
Confidence 33333 55668888887752 235788888854321 11236899999999999999998 77654321 11
Q ss_pred hhHhhcCCCcch-hcHHHHHHHHHhc-CCceEEEEEeeccHHHHHHcc-CCc-CceEEEEeccCCcC-------------
Q 026476 91 EWIKDHGVDKGF-EEAKPVIQALKSK-GITAIGAAGFCWGAKVVVQLG-KRE-FIQAAVLLHPSFVT------------- 153 (238)
Q Consensus 91 ~~~~~~~~~~~~-~d~~~~~~~l~~~-~~~~i~l~G~S~GG~~a~~~a-~~~-~i~a~i~~~~~~~~------------- 153 (238)
+..... .++.+++++++++ +.+++.++||||||.+++.++ ..+ .+++++++.+....
T Consensus 113 ------~~~d~~~~~~~~~v~~l~~~~~~~~i~lvGhS~GG~i~~~~~~~~~~~v~~lv~~~~p~~~~~~~~~~~~~~~~ 186 (350)
T TIGR01836 113 ------TLDDYINGYIDKCVDYICRTSKLDQISLLGICQGGTFSLCYAALYPDKIKNLVTMVTPVDFETPGNMLSNWARH 186 (350)
T ss_pred ------CHHHHHHHHHHHHHHHHHHHhCCCcccEEEECHHHHHHHHHHHhCchheeeEEEeccccccCCCCchhhhhccc
Confidence 112222 4578888888776 567999999999999999876 333 56666655331100
Q ss_pred --------------------------c-----------------------------------------------------
Q 026476 154 --------------------------V----------------------------------------------------- 154 (238)
Q Consensus 154 --------------------------~----------------------------------------------------- 154 (238)
+
T Consensus 187 ~~~~~~~~~~~~~p~~~~~~~f~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~d~~~~~~~~~~~~~~~~~~~n 266 (350)
T TIGR01836 187 VDIDLAVDTMGNIPGELLNLTFLMLKPFSLGYQKYVNLVDILEDERKVENFLRMEKWIFDSPDQAGEAFRQFVKDFYQQN 266 (350)
T ss_pred cCHHHHHHhcCCCCHHHHHHHHHhcCcchhhhHHHHHHHHhcCChHHHHHHHHHHHHhcCCcCccHHHHHHHHHHHHhcC
Confidence 0
Q ss_pred -------------ccccccCCcEEEEecCCCCCCCHHhHHHHHHHHhhcCCCCceEEEcCCCCeeeeecCCCCCHHHHHH
Q 026476 155 -------------DDIKGVEVPLSILGAEIDRLSPPALVKEFEEALNAKSGVDSFVKIFPKVAHGWTVRYNVEDETAVKA 221 (238)
Q Consensus 155 -------------~~~~~~~~P~L~i~g~~D~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~ 221 (238)
.++.++++|+|+++|++|.++|++.++.+.+.+. +.+++++++++++|++..... .
T Consensus 267 ~l~~g~~~~~~~~~~l~~i~~Pvliv~G~~D~i~~~~~~~~~~~~~~---~~~~~~~~~~~gH~~~~~~~~--------~ 335 (350)
T TIGR01836 267 GLINGEVEIGGRKVDLKNIKMPILNIYAERDHLVPPDASKALNDLVS---SEDYTELSFPGGHIGIYVSGK--------A 335 (350)
T ss_pred cccCCeeEECCEEccHHhCCCCeEEEecCCCCcCCHHHHHHHHHHcC---CCCeEEEEcCCCCEEEEECch--------h
Confidence 0133568899999999999999999999988772 236778899975666665432 4
Q ss_pred HHHHHHHHHHHHHHh
Q 026476 222 AEEAHHNLLEWFAKY 236 (238)
Q Consensus 222 ~~~~~~~~~~fl~~~ 236 (238)
.++.|+.+.+||+++
T Consensus 336 ~~~v~~~i~~wl~~~ 350 (350)
T TIGR01836 336 QKEVPPAIGKWLQAR 350 (350)
T ss_pred HhhhhHHHHHHHHhC
Confidence 578999999999864
No 36
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=99.79 E-value=8e-19 Score=129.74 Aligned_cols=203 Identities=13% Similarity=0.113 Sum_probs=145.8
Q ss_pred CCCCCCCCCceEEeeCCeeEEEecCCCCCeeEEEEeccCCCCCchHHHHHHHHHHC-CCEEEeccCCCCCccCCCCCcch
Q 026476 11 PTLNPNSGAGHVEKLGGLNAYVTGSPDSKLAVLLISDVYGYEAPNLRKLADKVAAA-GFYVAVPDFFHGDPYVADGGKPL 89 (238)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~vl~~hg~~g~~~~~~~~~a~~l~~~-G~~v~~~d~~~g~~~~~~~~~~~ 89 (238)
+..+....+..-+.+++...-+.........||++.|..|+.+.++......+... -+.+++.|. +|+|.+....+
T Consensus 14 ~~~~~~~~te~kv~vng~ql~y~~~G~G~~~iLlipGalGs~~tDf~pql~~l~k~l~~TivawDP-pGYG~SrPP~R-- 90 (277)
T KOG2984|consen 14 SPMTQSDYTESKVHVNGTQLGYCKYGHGPNYILLIPGALGSYKTDFPPQLLSLFKPLQVTIVAWDP-PGYGTSRPPER-- 90 (277)
T ss_pred CccccchhhhheeeecCceeeeeecCCCCceeEecccccccccccCCHHHHhcCCCCceEEEEECC-CCCCCCCCCcc--
Confidence 33444445666678888776666544444678999999887666665544444443 489999998 88776654322
Q ss_pred HhhHhhcCCCcchhcHHHHHHHHHhcCCceEEEEEeeccHHHHHHccCCc--CceEEEEeccCCcC--------------
Q 026476 90 QEWIKDHGVDKGFEEAKPVIQALKSKGITAIGAAGFCWGAKVVVQLGKRE--FIQAAVLLHPSFVT-------------- 153 (238)
Q Consensus 90 ~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~i~l~G~S~GG~~a~~~a~~~--~i~a~i~~~~~~~~-------------- 153 (238)
.+..+...+|++.+++..+.+..+++.++|+|-||.+++.+|++. .|...|.+.+...-
T Consensus 91 -----kf~~~ff~~Da~~avdLM~aLk~~~fsvlGWSdGgiTalivAak~~e~v~rmiiwga~ayvn~~~~ma~kgiRdv 165 (277)
T KOG2984|consen 91 -----KFEVQFFMKDAEYAVDLMEALKLEPFSVLGWSDGGITALIVAAKGKEKVNRMIIWGAAAYVNHLGAMAFKGIRDV 165 (277)
T ss_pred -----cchHHHHHHhHHHHHHHHHHhCCCCeeEeeecCCCeEEEEeeccChhhhhhheeecccceecchhHHHHhchHHH
Confidence 112233457888999988888889999999999999999988532 56666655432110
Q ss_pred -------------------------------------------cccccccCCcEEEEecCCCCCCCHHhHHHHHHHHhhc
Q 026476 154 -------------------------------------------VDDIKGVEVPLSILGAEIDRLSPPALVKEFEEALNAK 190 (238)
Q Consensus 154 -------------------------------------------~~~~~~~~~P~L~i~g~~D~~~p~~~~~~~~~~~~~~ 190 (238)
...+++++||+|++||++|++++...+..+....
T Consensus 166 ~kWs~r~R~P~e~~Yg~e~f~~~wa~wvD~v~qf~~~~dG~fCr~~lp~vkcPtli~hG~kDp~~~~~hv~fi~~~~--- 242 (277)
T KOG2984|consen 166 NKWSARGRQPYEDHYGPETFRTQWAAWVDVVDQFHSFCDGRFCRLVLPQVKCPTLIMHGGKDPFCGDPHVCFIPVLK--- 242 (277)
T ss_pred hhhhhhhcchHHHhcCHHHHHHHHHHHHHHHHHHhhcCCCchHhhhcccccCCeeEeeCCcCCCCCCCCccchhhhc---
Confidence 0117889999999999999999988888776654
Q ss_pred CCCCceEEEcCCCCeeeeecCCCCCHHHHHHHHHHHHHHHHHHHHh
Q 026476 191 SGVDSFVKIFPKVAHGWTVRYNVEDETAVKAAEEAHHNLLEWFAKY 236 (238)
Q Consensus 191 ~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~ 236 (238)
. -.+++++|.+.|.|..++ +++....+++||+..
T Consensus 243 ~--~a~~~~~peGkHn~hLry----------a~eFnklv~dFl~~~ 276 (277)
T KOG2984|consen 243 S--LAKVEIHPEGKHNFHLRY----------AKEFNKLVLDFLKST 276 (277)
T ss_pred c--cceEEEccCCCcceeeec----------hHHHHHHHHHHHhcc
Confidence 2 345789999999999864 468888999999864
No 37
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=99.79 E-value=2.3e-18 Score=140.90 Aligned_cols=189 Identities=19% Similarity=0.189 Sum_probs=124.0
Q ss_pred eeEEEecCC-C--CCeeEEEEeccCCCCCchHHHHHHHHHHCCCEEEeccCCCCCccCCCC-----CcchHhhHh-----
Q 026476 28 LNAYVTGSP-D--SKLAVLLISDVYGYEAPNLRKLADKVAAAGFYVAVPDFFHGDPYVADG-----GKPLQEWIK----- 94 (238)
Q Consensus 28 ~~~~~~~p~-~--~~~~vl~~hg~~g~~~~~~~~~a~~l~~~G~~v~~~d~~~g~~~~~~~-----~~~~~~~~~----- 94 (238)
+.+|+..|+ . +.|+||.+||..+.. ...... -.++.+||+|+.+|. ||++....+ ......+..
T Consensus 69 V~g~l~~P~~~~~~~Pavv~~hGyg~~~-~~~~~~-~~~a~~G~~vl~~d~-rGqg~~~~d~~~~~~~~~~g~~~~g~~~ 145 (320)
T PF05448_consen 69 VYGWLYRPKNAKGKLPAVVQFHGYGGRS-GDPFDL-LPWAAAGYAVLAMDV-RGQGGRSPDYRGSSGGTLKGHITRGIDD 145 (320)
T ss_dssp EEEEEEEES-SSSSEEEEEEE--TT--G-GGHHHH-HHHHHTT-EEEEE---TTTSSSS-B-SSBSSS-SSSSTTTTTTS
T ss_pred EEEEEEecCCCCCCcCEEEEecCCCCCC-CCcccc-cccccCCeEEEEecC-CCCCCCCCCccccCCCCCccHHhcCccC
Confidence 789999997 3 348899999876653 333333 348899999999999 898732211 001111110
Q ss_pred ---hcCCCcchhcHHHHHHHHHhc---CCceEEEEEeeccHHHHHHcc-CCcCceEEEEeccCCcC--------------
Q 026476 95 ---DHGVDKGFEEAKPVIQALKSK---GITAIGAAGFCWGAKVVVQLG-KREFIQAAVLLHPSFVT-------------- 153 (238)
Q Consensus 95 ---~~~~~~~~~d~~~~~~~l~~~---~~~~i~l~G~S~GG~~a~~~a-~~~~i~a~i~~~~~~~~-------------- 153 (238)
+.-......|+..++++++++ |.++|++.|.|+||.+++.+| .+++|++++...|..-+
T Consensus 146 ~~e~~yyr~~~~D~~ravd~l~slpevD~~rI~v~G~SqGG~lal~~aaLd~rv~~~~~~vP~l~d~~~~~~~~~~~~~y 225 (320)
T PF05448_consen 146 NPEDYYYRRVYLDAVRAVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAALDPRVKAAAADVPFLCDFRRALELRADEGPY 225 (320)
T ss_dssp -TTT-HHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSST-SEEEEESESSSSHHHHHHHT--STTT
T ss_pred chHHHHHHHHHHHHHHHHHHHHhCCCcCcceEEEEeecCchHHHHHHHHhCccccEEEecCCCccchhhhhhcCCccccH
Confidence 000123557899999999988 578999999999999999977 67899999988764321
Q ss_pred -----------------------------cccccccCCcEEEEecCCCCCCCHHhHHHHHHHHhhcCCCCceEEEcCCCC
Q 026476 154 -----------------------------VDDIKGVEVPLSILGAEIDRLSPPALVKEFEEALNAKSGVDSFVKIFPKVA 204 (238)
Q Consensus 154 -----------------------------~~~~~~~~~P~L~i~g~~D~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 204 (238)
.....+|++|+|+-.|-.|+++|+...-..++.+. .++++.+||..+
T Consensus 226 ~~~~~~~~~~d~~~~~~~~v~~~L~Y~D~~nfA~ri~~pvl~~~gl~D~~cPP~t~fA~yN~i~----~~K~l~vyp~~~ 301 (320)
T PF05448_consen 226 PEIRRYFRWRDPHHEREPEVFETLSYFDAVNFARRIKCPVLFSVGLQDPVCPPSTQFAAYNAIP----GPKELVVYPEYG 301 (320)
T ss_dssp HHHHHHHHHHSCTHCHHHHHHHHHHTT-HHHHGGG--SEEEEEEETT-SSS-HHHHHHHHCC------SSEEEEEETT--
T ss_pred HHHHHHHhccCCCcccHHHHHHHHhhhhHHHHHHHcCCCEEEEEecCCCCCCchhHHHHHhccC----CCeeEEeccCcC
Confidence 00146789999999999999999999999998873 268899999999
Q ss_pred eeeeecCCCCCHHHHHHHHHHHHHHHHHHHHh
Q 026476 205 HGWTVRYNVEDETAVKAAEEAHHNLLEWFAKY 236 (238)
Q Consensus 205 H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~ 236 (238)
|.... +...+..++||++|
T Consensus 302 He~~~-------------~~~~~~~~~~l~~~ 320 (320)
T PF05448_consen 302 HEYGP-------------EFQEDKQLNFLKEH 320 (320)
T ss_dssp SSTTH-------------HHHHHHHHHHHHH-
T ss_pred CCchh-------------hHHHHHHHHHHhcC
Confidence 98633 34478899999876
No 38
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.79 E-value=5.9e-18 Score=133.38 Aligned_cols=168 Identities=16% Similarity=0.202 Sum_probs=114.3
Q ss_pred CCeeEEEEeccCCCCCchHHHHHHHHHHCCCEEEeccCCCCCccCCCCCcchHhhHhhcCCCcchhcHHHHHHHHHhcCC
Q 026476 38 SKLAVLLISDVYGYEAPNLRKLADKVAAAGFYVAVPDFFHGDPYVADGGKPLQEWIKDHGVDKGFEEAKPVIQALKSKGI 117 (238)
Q Consensus 38 ~~~~vl~~hg~~g~~~~~~~~~a~~l~~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~ 117 (238)
..|++|++||..+. ...+..+++.|. .||.|+++|+ +|+|.+..... ..+.....+|+.++++. .+.
T Consensus 12 ~~~~li~~hg~~~~-~~~~~~~~~~l~-~~~~v~~~d~-~G~G~s~~~~~-------~~~~~~~~~~~~~~i~~---~~~ 78 (251)
T TIGR02427 12 GAPVLVFINSLGTD-LRMWDPVLPALT-PDFRVLRYDK-RGHGLSDAPEG-------PYSIEDLADDVLALLDH---LGI 78 (251)
T ss_pred CCCeEEEEcCcccc-hhhHHHHHHHhh-cccEEEEecC-CCCCCCCCCCC-------CCCHHHHHHHHHHHHHH---hCC
Confidence 45778888886555 456788888875 5899999999 89886643210 11223344455555443 356
Q ss_pred ceEEEEEeeccHHHHHHcc-CCc-CceEEEEeccCCc--------------------------------------C----
Q 026476 118 TAIGAAGFCWGAKVVVQLG-KRE-FIQAAVLLHPSFV--------------------------------------T---- 153 (238)
Q Consensus 118 ~~i~l~G~S~GG~~a~~~a-~~~-~i~a~i~~~~~~~--------------------------------------~---- 153 (238)
+++.++|||+||.+++.++ ..| .+++++++.+... .
T Consensus 79 ~~v~liG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (251)
T TIGR02427 79 ERAVFCGLSLGGLIAQGLAARRPDRVRALVLSNTAAKIGTPESWNARIAAVRAEGLAALADAVLERWFTPGFREAHPARL 158 (251)
T ss_pred CceEEEEeCchHHHHHHHHHHCHHHhHHHhhccCccccCchhhHHHHHhhhhhccHHHHHHHHHHHHcccccccCChHHH
Confidence 7899999999999999977 332 4555554322100 0
Q ss_pred ---------------------------cccccccCCcEEEEecCCCCCCCHHhHHHHHHHHhhcCCCCceEEEcCCCCee
Q 026476 154 ---------------------------VDDIKGVEVPLSILGAEIDRLSPPALVKEFEEALNAKSGVDSFVKIFPKVAHG 206 (238)
Q Consensus 154 ---------------------------~~~~~~~~~P~L~i~g~~D~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~H~ 206 (238)
...+.++++|+|+++|++|.++|.+..+.+.+.+. +.+++++++++|.
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvlii~g~~D~~~~~~~~~~~~~~~~-----~~~~~~~~~~gH~ 233 (251)
T TIGR02427 159 DLYRNMLVRQPPDGYAGCCAAIRDADFRDRLGAIAVPTLCIAGDQDGSTPPELVREIADLVP-----GARFAEIRGAGHI 233 (251)
T ss_pred HHHHHHHHhcCHHHHHHHHHHHhcccHHHHhhhcCCCeEEEEeccCCcCChHHHHHHHHhCC-----CceEEEECCCCCc
Confidence 01134578999999999999999998888777652 4568899999998
Q ss_pred eeecCCCCCHHHHHHHHHHHHHHHHHH
Q 026476 207 WTVRYNVEDETAVKAAEEAHHNLLEWF 233 (238)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~fl 233 (238)
..... .++..+.+.+||
T Consensus 234 ~~~~~----------p~~~~~~i~~fl 250 (251)
T TIGR02427 234 PCVEQ----------PEAFNAALRDFL 250 (251)
T ss_pred ccccC----------hHHHHHHHHHHh
Confidence 76532 256777777776
No 39
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.78 E-value=4e-18 Score=133.97 Aligned_cols=161 Identities=20% Similarity=0.209 Sum_probs=115.4
Q ss_pred eeEEEEeccCCCCCchHHHHHHHHHHCCCEEEeccCCCCCccCCCCCcchHhhHhhcCCCcchhcHHHHHHHHHhcCCce
Q 026476 40 LAVLLISDVYGYEAPNLRKLADKVAAAGFYVAVPDFFHGDPYVADGGKPLQEWIKDHGVDKGFEEAKPVIQALKSKGITA 119 (238)
Q Consensus 40 ~~vl~~hg~~g~~~~~~~~~a~~l~~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~ 119 (238)
|+||++||+.+.. ..+..+++.|++ +|.|+++|+ +|++.+... . ..++.++++.+.+...++
T Consensus 5 ~~iv~~HG~~~~~-~~~~~~~~~l~~-~~~vi~~d~-~G~G~s~~~-----------~----~~~~~~~~~~~~~~~~~~ 66 (245)
T TIGR01738 5 VHLVLIHGWGMNA-EVFRCLDEELSA-HFTLHLVDL-PGHGRSRGF-----------G----PLSLADAAEAIAAQAPDP 66 (245)
T ss_pred ceEEEEcCCCCch-hhHHHHHHhhcc-CeEEEEecC-CcCccCCCC-----------C----CcCHHHHHHHHHHhCCCC
Confidence 7899999976664 677889998865 699999999 898876431 0 013344444444444479
Q ss_pred EEEEEeeccHHHHHHcc-CCc-CceEEEEeccCCc-------C-------------------------------------
Q 026476 120 IGAAGFCWGAKVVVQLG-KRE-FIQAAVLLHPSFV-------T------------------------------------- 153 (238)
Q Consensus 120 i~l~G~S~GG~~a~~~a-~~~-~i~a~i~~~~~~~-------~------------------------------------- 153 (238)
+.++||||||.+++.++ ..| .++++|++.+... .
T Consensus 67 ~~lvG~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (245)
T TIGR01738 67 AIWLGWSLGGLVALHIAATHPDRVRALVTVASSPCFSAREDWPEGIKPDVLTGFQQQLSDDYQRTIERFLALQTLGTPTA 146 (245)
T ss_pred eEEEEEcHHHHHHHHHHHHCHHhhheeeEecCCcccccCCcccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcc
Confidence 99999999999999987 444 4777766532100 0
Q ss_pred ----------------c------------------ccccccCCcEEEEecCCCCCCCHHhHHHHHHHHhhcCCCCceEEE
Q 026476 154 ----------------V------------------DDIKGVEVPLSILGAEIDRLSPPALVKEFEEALNAKSGVDSFVKI 199 (238)
Q Consensus 154 ----------------~------------------~~~~~~~~P~L~i~g~~D~~~p~~~~~~~~~~~~~~~~~~~~~~~ 199 (238)
. ..+.++++|+|+++|++|.++|++..+.+.+.+. +.++++
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~-----~~~~~~ 221 (245)
T TIGR01738 147 RQDARALKQTLLARPTPNVQVLQAGLEILATVDLRQPLQNISVPFLRLYGYLDGLVPAKVVPYLDKLAP-----HSELYI 221 (245)
T ss_pred chHHHHHHHHhhccCCCCHHHHHHHHHHhhcccHHHHHhcCCCCEEEEeecCCcccCHHHHHHHHHhCC-----CCeEEE
Confidence 0 0135788999999999999999988888777652 567889
Q ss_pred cCCCCeeeeecCCCCCHHHHHHHHHHHHHHHHHH
Q 026476 200 FPKVAHGWTVRYNVEDETAVKAAEEAHHNLLEWF 233 (238)
Q Consensus 200 ~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl 233 (238)
+++++|..... ..++..+.+.+|+
T Consensus 222 ~~~~gH~~~~e----------~p~~~~~~i~~fi 245 (245)
T TIGR01738 222 FAKAAHAPFLS----------HAEAFCALLVAFK 245 (245)
T ss_pred eCCCCCCcccc----------CHHHHHHHHHhhC
Confidence 99999997663 2356777777764
No 40
>PRK10985 putative hydrolase; Provisional
Probab=99.78 E-value=1.4e-17 Score=137.70 Aligned_cols=182 Identities=16% Similarity=0.199 Sum_probs=125.4
Q ss_pred CCeeEEEEeccCCCCC-chHHHHHHHHHHCCCEEEeccCCCCCccCCCCCcchHhhHhhcCCCcchhcHHHHHHHHHhc-
Q 026476 38 SKLAVLLISDVYGYEA-PNLRKLADKVAAAGFYVAVPDFFHGDPYVADGGKPLQEWIKDHGVDKGFEEAKPVIQALKSK- 115 (238)
Q Consensus 38 ~~~~vl~~hg~~g~~~-~~~~~~a~~l~~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~- 115 (238)
..|.||++||..|... ..+..++..|.++||.|+++|+ ||++.++..... .+ .....+|+..++++++++
T Consensus 57 ~~p~vll~HG~~g~~~~~~~~~~~~~l~~~G~~v~~~d~-rG~g~~~~~~~~------~~-~~~~~~D~~~~i~~l~~~~ 128 (324)
T PRK10985 57 HKPRLVLFHGLEGSFNSPYAHGLLEAAQKRGWLGVVMHF-RGCSGEPNRLHR------IY-HSGETEDARFFLRWLQREF 128 (324)
T ss_pred CCCEEEEeCCCCCCCcCHHHHHHHHHHHHCCCEEEEEeC-CCCCCCccCCcc------eE-CCCchHHHHHHHHHHHHhC
Confidence 3578999999877532 3456799999999999999999 998755432000 01 122468899999999875
Q ss_pred CCceEEEEEeeccHHHHHHcc-CC-c--CceEEEEeccCCcC--------------------------------------
Q 026476 116 GITAIGAAGFCWGAKVVVQLG-KR-E--FIQAAVLLHPSFVT-------------------------------------- 153 (238)
Q Consensus 116 ~~~~i~l~G~S~GG~~a~~~a-~~-~--~i~a~i~~~~~~~~-------------------------------------- 153 (238)
+..++.++||||||.++..++ .. + .+++++++.++...
T Consensus 129 ~~~~~~~vG~S~GG~i~~~~~~~~~~~~~~~~~v~i~~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~ 208 (324)
T PRK10985 129 GHVPTAAVGYSLGGNMLACLLAKEGDDLPLDAAVIVSAPLMLEACSYRMEQGFSRVYQRYLLNLLKANAARKLAAYPGTL 208 (324)
T ss_pred CCCCEEEEEecchHHHHHHHHHhhCCCCCccEEEEEcCCCCHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 567899999999999877755 32 2 37787777554210
Q ss_pred ---------------------------------------cccccccCCcEEEEecCCCCCCCHHhHHHHHHHHhhcCCCC
Q 026476 154 ---------------------------------------VDDIKGVEVPLSILGAEIDRLSPPALVKEFEEALNAKSGVD 194 (238)
Q Consensus 154 ---------------------------------------~~~~~~~~~P~L~i~g~~D~~~p~~~~~~~~~~~~~~~~~~ 194 (238)
...+.++++|+|+|+|++|++++++....+.+.. .+
T Consensus 209 ~~~~~~~~~~~~~~~fd~~~~~~~~g~~~~~~~y~~~~~~~~l~~i~~P~lii~g~~D~~~~~~~~~~~~~~~-----~~ 283 (324)
T PRK10985 209 PINLAQLKSVRRLREFDDLITARIHGFADAIDYYRQCSALPLLNQIRKPTLIIHAKDDPFMTHEVIPKPESLP-----PN 283 (324)
T ss_pred cCCHHHHhcCCcHHHHhhhheeccCCCCCHHHHHHHCChHHHHhCCCCCEEEEecCCCCCCChhhChHHHHhC-----CC
Confidence 0115678899999999999999988777654322 15
Q ss_pred ceEEEcCCCCeeeeecCCCCCHHHHHHHHHHHHHHHHHHHHhc
Q 026476 195 SFVKIFPKVAHGWTVRYNVEDETAVKAAEEAHHNLLEWFAKYV 237 (238)
Q Consensus 195 ~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~ 237 (238)
.++.++++++|.-........+ ...+-+.+.+||...+
T Consensus 284 ~~~~~~~~~GH~~~~~g~~~~~-----~~w~~~~~~~~~~~~~ 321 (324)
T PRK10985 284 VEYQLTEHGGHVGFVGGTLLKP-----QMWLEQRIPDWLTTYL 321 (324)
T ss_pred eEEEECCCCCceeeCCCCCCCC-----CccHHHHHHHHHHHhh
Confidence 6788899999966544321000 1245566888887653
No 41
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.78 E-value=4.2e-17 Score=131.75 Aligned_cols=196 Identities=13% Similarity=0.117 Sum_probs=123.0
Q ss_pred eeEEEecCC----CCCeeEEEEeccCCCCCchHHH--HHHHH-HHCCCEEEeccCC-CCCccCCCC--Cc--chHhh-Hh
Q 026476 28 LNAYVTGSP----DSKLAVLLISDVYGYEAPNLRK--LADKV-AAAGFYVAVPDFF-HGDPYVADG--GK--PLQEW-IK 94 (238)
Q Consensus 28 ~~~~~~~p~----~~~~~vl~~hg~~g~~~~~~~~--~a~~l-~~~G~~v~~~d~~-~g~~~~~~~--~~--~~~~~-~~ 94 (238)
+...++.|+ .+.|+|+++||..+.. ..+.. ....+ ++.|+.|++||.. +|.+.+... +. ....| .+
T Consensus 27 ~~~~v~~P~~~~~~~~P~vvllHG~~~~~-~~~~~~~~~~~la~~~g~~Vv~Pd~~~~g~~~~~~~~~w~~g~~~~~~~d 105 (275)
T TIGR02821 27 MTFGVFLPPQAAAGPVPVLWYLSGLTCTH-ENFMIKAGAQRFAAEHGLALVAPDTSPRGTGIAGEDDAWDFGKGAGFYVD 105 (275)
T ss_pred eEEEEEcCCCccCCCCCEEEEccCCCCCc-cHHHhhhHHHHHHhhcCcEEEEeCCCCCcCCCCCCcccccccCCcccccc
Confidence 446666664 2458899999887654 33322 22344 4569999999973 444322110 00 00011 00
Q ss_pred hcC-C----CcchhcH-HHHHHHHHh---cCCceEEEEEeeccHHHHHHcc-CCc-CceEEEEeccCCcC----------
Q 026476 95 DHG-V----DKGFEEA-KPVIQALKS---KGITAIGAAGFCWGAKVVVQLG-KRE-FIQAAVLLHPSFVT---------- 153 (238)
Q Consensus 95 ~~~-~----~~~~~d~-~~~~~~l~~---~~~~~i~l~G~S~GG~~a~~~a-~~~-~i~a~i~~~~~~~~---------- 153 (238)
... + .+....+ .++...+.+ .+.++++++||||||.+++.++ ..| .+++++++.+....
T Consensus 106 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (275)
T TIGR02821 106 ATEEPWSQHYRMYSYIVQELPALVAAQFPLDGERQGITGHSMGGHGALVIALKNPDRFKSVSAFAPIVAPSRCPWGQKAF 185 (275)
T ss_pred CCcCcccccchHHHHHHHHHHHHHHhhCCCCCCceEEEEEChhHHHHHHHHHhCcccceEEEEECCccCcccCcchHHHH
Confidence 000 0 0111221 223333333 2567999999999999999987 444 67777776654211
Q ss_pred -------ccc---------c--cccCCcEEEEecCCCCCCCH-HhHHHHHHHHhhcCCCCceEEEcCCCCeeeeecCCCC
Q 026476 154 -------VDD---------I--KGVEVPLSILGAEIDRLSPP-ALVKEFEEALNAKSGVDSFVKIFPKVAHGWTVRYNVE 214 (238)
Q Consensus 154 -------~~~---------~--~~~~~P~L~i~g~~D~~~p~-~~~~~~~~~~~~~~~~~~~~~~~~g~~H~~~~~~~~~ 214 (238)
... . .....|+++++|++|+.+|. .+...+.+.+ ++.+.++++..+||.+|+|..
T Consensus 186 ~~~l~~~~~~~~~~~~~~~~~~~~~~~plli~~G~~D~~v~~~~~~~~~~~~l-~~~g~~v~~~~~~g~~H~f~~----- 259 (275)
T TIGR02821 186 SAYLGADEAAWRSYDASLLVADGGRHSTILIDQGTADQFLDEQLRPDAFEQAC-RAAGQALTLRRQAGYDHSYYF----- 259 (275)
T ss_pred HHHhcccccchhhcchHHHHhhcccCCCeeEeecCCCcccCccccHHHHHHHH-HHcCCCeEEEEeCCCCccchh-----
Confidence 000 0 12457999999999999998 5788899998 567889999999999999943
Q ss_pred CHHHHHHHHHHHHHHHHHHHHhc
Q 026476 215 DETAVKAAEEAHHNLLEWFAKYV 237 (238)
Q Consensus 215 ~~~~~~~~~~~~~~~~~fl~~~~ 237 (238)
....+...++|+.+++
T Consensus 260 -------~~~~~~~~~~~~~~~~ 275 (275)
T TIGR02821 260 -------IASFIADHLRHHAERL 275 (275)
T ss_pred -------HHHhHHHHHHHHHhhC
Confidence 4677888888888764
No 42
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.77 E-value=5.1e-17 Score=130.79 Aligned_cols=173 Identities=20% Similarity=0.270 Sum_probs=114.8
Q ss_pred CCeeEEEEeccCCCCCchHHHHHHHHHHCCCEEEeccCCCCCccCCCCCcchHhhHhhcCCCcchhcHHHHHHHHHhcCC
Q 026476 38 SKLAVLLISDVYGYEAPNLRKLADKVAAAGFYVAVPDFFHGDPYVADGGKPLQEWIKDHGVDKGFEEAKPVIQALKSKGI 117 (238)
Q Consensus 38 ~~~~vl~~hg~~g~~~~~~~~~a~~l~~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~ 117 (238)
+.++||++||+.|.....+..+...+.+.||.|+++|+ +|++.+....... . ..+.+...+|+.++++ ..+.
T Consensus 24 ~~~~vl~~hG~~g~~~~~~~~~~~~l~~~g~~vi~~d~-~G~G~s~~~~~~~-~---~~~~~~~~~~~~~~~~---~~~~ 95 (288)
T TIGR01250 24 EKIKLLLLHGGPGMSHEYLENLRELLKEEGREVIMYDQ-LGCGYSDQPDDSD-E---LWTIDYFVDELEEVRE---KLGL 95 (288)
T ss_pred CCCeEEEEcCCCCccHHHHHHHHHHHHhcCCEEEEEcC-CCCCCCCCCCccc-c---cccHHHHHHHHHHHHH---HcCC
Confidence 45789999998776544556666666666999999999 8988664321000 0 0112233344444433 3356
Q ss_pred ceEEEEEeeccHHHHHHcc-CCc-CceEEEEeccCCc---------------C---------------------------
Q 026476 118 TAIGAAGFCWGAKVVVQLG-KRE-FIQAAVLLHPSFV---------------T--------------------------- 153 (238)
Q Consensus 118 ~~i~l~G~S~GG~~a~~~a-~~~-~i~a~i~~~~~~~---------------~--------------------------- 153 (238)
.++.++||||||.+++.++ ..| .+++++++.+... .
T Consensus 96 ~~~~liG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (288)
T TIGR01250 96 DKFYLLGHSWGGMLAQEYALKYGQHLKGLIISSMLDSAPEYVKELNRLRKELPPEVRAAIKRCEASGDYDNPEYQEAVEV 175 (288)
T ss_pred CcEEEEEeehHHHHHHHHHHhCccccceeeEecccccchHHHHHHHHHHhhcChhHHHHHHHHHhccCcchHHHHHHHHH
Confidence 7899999999999999987 444 5777765432100 0
Q ss_pred ------------------------------------------------cccccccCCcEEEEecCCCCCCCHHhHHHHHH
Q 026476 154 ------------------------------------------------VDDIKGVEVPLSILGAEIDRLSPPALVKEFEE 185 (238)
Q Consensus 154 ------------------------------------------------~~~~~~~~~P~L~i~g~~D~~~p~~~~~~~~~ 185 (238)
...+.++++|+|+++|++|.+ +++..+.+.+
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~-~~~~~~~~~~ 254 (288)
T TIGR01250 176 FYHHLLCRTRKWPEALKHLKSGMNTNVYNIMQGPNEFTITGNLKDWDITDKLSEIKVPTLLTVGEFDTM-TPEAAREMQE 254 (288)
T ss_pred HHHHhhcccccchHHHHHHhhccCHHHHhcccCCccccccccccccCHHHHhhccCCCEEEEecCCCcc-CHHHHHHHHH
Confidence 001245789999999999985 5677777776
Q ss_pred HHhhcCCCCceEEEcCCCCeeeeecCCCCCHHHHHHHHHHHHHHHHHHH
Q 026476 186 ALNAKSGVDSFVKIFPKVAHGWTVRYNVEDETAVKAAEEAHHNLLEWFA 234 (238)
Q Consensus 186 ~~~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~ 234 (238)
.+. +.+++++++++|...... .++..+.+.+||+
T Consensus 255 ~~~-----~~~~~~~~~~gH~~~~e~----------p~~~~~~i~~fl~ 288 (288)
T TIGR01250 255 LIA-----GSRLVVFPDGSHMTMIED----------PEVYFKLLSDFIR 288 (288)
T ss_pred hcc-----CCeEEEeCCCCCCcccCC----------HHHHHHHHHHHhC
Confidence 552 456889999999876642 3577788888873
No 43
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.77 E-value=1.6e-17 Score=132.22 Aligned_cols=185 Identities=21% Similarity=0.322 Sum_probs=129.9
Q ss_pred CCC-CCeeEEEEeccCC-CCCchHHHHHHHHHHCCCEEEeccCCCCCccCCCCCcchHhhHhhcCCCcchhcHHHHHHHH
Q 026476 35 SPD-SKLAVLLISDVYG-YEAPNLRKLADKVAAAGFYVAVPDFFHGDPYVADGGKPLQEWIKDHGVDKGFEEAKPVIQAL 112 (238)
Q Consensus 35 p~~-~~~~vl~~hg~~g-~~~~~~~~~a~~l~~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l 112 (238)
|.. ..|.||++||..| .+.+..+.+++.+.++||.|+++++ ||.+.++.... +..-....+|+..+++++
T Consensus 70 p~~~~~P~vVl~HGL~G~s~s~y~r~L~~~~~~rg~~~Vv~~~-Rgcs~~~n~~p-------~~yh~G~t~D~~~~l~~l 141 (345)
T COG0429 70 PRAAKKPLVVLFHGLEGSSNSPYARGLMRALSRRGWLVVVFHF-RGCSGEANTSP-------RLYHSGETEDIRFFLDWL 141 (345)
T ss_pred ccccCCceEEEEeccCCCCcCHHHHHHHHHHHhcCCeEEEEec-ccccCCcccCc-------ceecccchhHHHHHHHHH
Confidence 543 3478999999876 3456778999999999999999999 99987653200 111123448999999999
Q ss_pred Hhc-CCceEEEEEeeccH-HHHHHccC---CcCceEEEEeccCCc-----------------------------------
Q 026476 113 KSK-GITAIGAAGFCWGA-KVVVQLGK---REFIQAAVLLHPSFV----------------------------------- 152 (238)
Q Consensus 113 ~~~-~~~~i~l~G~S~GG-~~a~~~a~---~~~i~a~i~~~~~~~----------------------------------- 152 (238)
+.+ ...++..+|+|+|| +++..++. +..+.+++.+..++.
T Consensus 142 ~~~~~~r~~~avG~SLGgnmLa~ylgeeg~d~~~~aa~~vs~P~Dl~~~~~~l~~~~s~~ly~r~l~~~L~~~~~~kl~~ 221 (345)
T COG0429 142 KARFPPRPLYAVGFSLGGNMLANYLGEEGDDLPLDAAVAVSAPFDLEACAYRLDSGFSLRLYSRYLLRNLKRNAARKLKE 221 (345)
T ss_pred HHhCCCCceEEEEecccHHHHHHHHHhhccCcccceeeeeeCHHHHHHHHHHhcCchhhhhhHHHHHHHHHHHHHHHHHh
Confidence 886 57799999999999 55555663 235666665532210
Q ss_pred --------------------------------------------CcccccccCCcEEEEecCCCCCCCHHhHHHHHHHHh
Q 026476 153 --------------------------------------------TVDDIKGVEVPLSILGAEIDRLSPPALVKEFEEALN 188 (238)
Q Consensus 153 --------------------------------------------~~~~~~~~~~P~L~i~g~~D~~~p~~~~~~~~~~~~ 188 (238)
....+++|++|+|+|++.+|++++++.........
T Consensus 222 l~~~~p~~~~~~ik~~~ti~eFD~~~Tap~~Gf~da~dYYr~aSs~~~L~~Ir~PtLii~A~DDP~~~~~~iP~~~~~~- 300 (345)
T COG0429 222 LEPSLPGTVLAAIKRCRTIREFDDLLTAPLHGFADAEDYYRQASSLPLLPKIRKPTLIINAKDDPFMPPEVIPKLQEML- 300 (345)
T ss_pred cCcccCcHHHHHHHhhchHHhccceeeecccCCCcHHHHHHhccccccccccccceEEEecCCCCCCChhhCCcchhcC-
Confidence 01127889999999999999999998777666543
Q ss_pred hcCCCCceEEEcCCCCe-eeeecCCCCCHHHHHHHHHHHHHHHHHHHHhc
Q 026476 189 AKSGVDSFVKIFPKVAH-GWTVRYNVEDETAVKAAEEAHHNLLEWFAKYV 237 (238)
Q Consensus 189 ~~~~~~~~~~~~~g~~H-~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~ 237 (238)
++ .+++..-+.+|| ||....... ....+.+++.+||+..+
T Consensus 301 -np--~v~l~~t~~GGHvGfl~~~~~~------~~~W~~~ri~~~l~~~~ 341 (345)
T COG0429 301 -NP--NVLLQLTEHGGHVGFLGGKLLH------PQMWLEQRILDWLDPFL 341 (345)
T ss_pred -CC--ceEEEeecCCceEEeccCcccc------chhhHHHHHHHHHHHHH
Confidence 23 566777776788 665532211 12367788999998754
No 44
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.77 E-value=2.6e-17 Score=126.87 Aligned_cols=181 Identities=16% Similarity=0.134 Sum_probs=130.4
Q ss_pred eeEEEecCCC-CCeeEEEEeccCCCCCchHHHHHHHHHH-CCCEEEeccCCCCCccCCCCCcchHhhHhhcCCCcchhcH
Q 026476 28 LNAYVTGSPD-SKLAVLLISDVYGYEAPNLRKLADKVAA-AGFYVAVPDFFHGDPYVADGGKPLQEWIKDHGVDKGFEEA 105 (238)
Q Consensus 28 ~~~~~~~p~~-~~~~vl~~hg~~g~~~~~~~~~a~~l~~-~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~ 105 (238)
+.+....|.. ..+.+|+.||....- ..+..+-..|.. .++.++.+|+ +|.|.+.+.. ......+|+
T Consensus 48 ~~~~y~~~~~~~~~~lly~hGNa~Dl-gq~~~~~~~l~~~ln~nv~~~DY-SGyG~S~G~p----------sE~n~y~Di 115 (258)
T KOG1552|consen 48 IVCMYVRPPEAAHPTLLYSHGNAADL-GQMVELFKELSIFLNCNVVSYDY-SGYGRSSGKP----------SERNLYADI 115 (258)
T ss_pred EEEEEEcCccccceEEEEcCCcccch-HHHHHHHHHHhhcccceEEEEec-ccccccCCCc----------ccccchhhH
Confidence 4455555543 457888888863322 234445555555 3899999999 9998887642 122456899
Q ss_pred HHHHHHHHhcC--CceEEEEEeeccHHHHHHccCCcCceEEEEeccCCc-------------------CcccccccCCcE
Q 026476 106 KPVIQALKSKG--ITAIGAAGFCWGAKVVVQLGKREFIQAAVLLHPSFV-------------------TVDDIKGVEVPL 164 (238)
Q Consensus 106 ~~~~~~l~~~~--~~~i~l~G~S~GG~~a~~~a~~~~i~a~i~~~~~~~-------------------~~~~~~~~~~P~ 164 (238)
+++.+++++.. .++|.++|+|+|...++.+|.+..+.++|+..|-.. ..+....+++|+
T Consensus 116 ~avye~Lr~~~g~~~~Iil~G~SiGt~~tv~Lasr~~~~alVL~SPf~S~~rv~~~~~~~~~~~d~f~~i~kI~~i~~PV 195 (258)
T KOG1552|consen 116 KAVYEWLRNRYGSPERIILYGQSIGTVPTVDLASRYPLAAVVLHSPFTSGMRVAFPDTKTTYCFDAFPNIEKISKITCPV 195 (258)
T ss_pred HHHHHHHHhhcCCCceEEEEEecCCchhhhhHhhcCCcceEEEeccchhhhhhhccCcceEEeeccccccCcceeccCCE
Confidence 99999999884 589999999999999999884434888887654311 134467789999
Q ss_pred EEEecCCCCCCCHHhHHHHHHHHhhcCCCCceEEEcCCCCeeeeecCCCCCHHHHHHHHHHHHHHHHHHHH
Q 026476 165 SILGAEIDRLSPPALVKEFEEALNAKSGVDSFVKIFPKVAHGWTVRYNVEDETAVKAAEEAHHNLLEWFAK 235 (238)
Q Consensus 165 L~i~g~~D~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~ 235 (238)
|++||++|+++|....+++++.++ . +++-.+..|++|.....+ .+..+.+..|+..
T Consensus 196 LiiHgtdDevv~~sHg~~Lye~~k-~---~~epl~v~g~gH~~~~~~-----------~~yi~~l~~f~~~ 251 (258)
T KOG1552|consen 196 LIIHGTDDEVVDFSHGKALYERCK-E---KVEPLWVKGAGHNDIELY-----------PEYIEHLRRFISS 251 (258)
T ss_pred EEEecccCceecccccHHHHHhcc-c---cCCCcEEecCCCcccccC-----------HHHHHHHHHHHHH
Confidence 999999999999999999999873 2 355566677888765433 3566777777654
No 45
>PLN02511 hydrolase
Probab=99.77 E-value=1.5e-17 Score=140.36 Aligned_cols=182 Identities=19% Similarity=0.194 Sum_probs=122.7
Q ss_pred CCeeEEEEeccCCCCCc-hHHHHHHHHHHCCCEEEeccCCCCCccCCCCCcchHhhHhhcCCCcchhcHHHHHHHHHhc-
Q 026476 38 SKLAVLLISDVYGYEAP-NLRKLADKVAAAGFYVAVPDFFHGDPYVADGGKPLQEWIKDHGVDKGFEEAKPVIQALKSK- 115 (238)
Q Consensus 38 ~~~~vl~~hg~~g~~~~-~~~~~a~~l~~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~- 115 (238)
..|.||++||+.|.... ++..++..+.+.||.|+++|+ ||+|.++.... ........+|+.+++++++.+
T Consensus 99 ~~p~vvllHG~~g~s~~~y~~~~~~~~~~~g~~vv~~d~-rG~G~s~~~~~-------~~~~~~~~~Dl~~~i~~l~~~~ 170 (388)
T PLN02511 99 DAPVLILLPGLTGGSDDSYVRHMLLRARSKGWRVVVFNS-RGCADSPVTTP-------QFYSASFTGDLRQVVDHVAGRY 170 (388)
T ss_pred CCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEec-CCCCCCCCCCc-------CEEcCCchHHHHHHHHHHHHHC
Confidence 45789999998775433 456788888899999999999 99987653200 111234678999999999876
Q ss_pred CCceEEEEEeeccHHHHHHcc-CCc---CceEEEEeccCCc---------------------------------------
Q 026476 116 GITAIGAAGFCWGAKVVVQLG-KRE---FIQAAVLLHPSFV--------------------------------------- 152 (238)
Q Consensus 116 ~~~~i~l~G~S~GG~~a~~~a-~~~---~i~a~i~~~~~~~--------------------------------------- 152 (238)
+..++.++||||||.+++.++ ..+ .+++++++.++..
T Consensus 171 ~~~~~~lvG~SlGg~i~~~yl~~~~~~~~v~~~v~is~p~~l~~~~~~~~~~~~~~y~~~~~~~l~~~~~~~~~~~~~~~ 250 (388)
T PLN02511 171 PSANLYAAGWSLGANILVNYLGEEGENCPLSGAVSLCNPFDLVIADEDFHKGFNNVYDKALAKALRKIFAKHALLFEGLG 250 (388)
T ss_pred CCCCEEEEEechhHHHHHHHHHhcCCCCCceEEEEECCCcCHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhhCC
Confidence 446899999999999999976 333 2677766533210
Q ss_pred ---C------------------------------------cccccccCCcEEEEecCCCCCCCHHhHH-HHHHHHhhcCC
Q 026476 153 ---T------------------------------------VDDIKGVEVPLSILGAEIDRLSPPALVK-EFEEALNAKSG 192 (238)
Q Consensus 153 ---~------------------------------------~~~~~~~~~P~L~i~g~~D~~~p~~~~~-~~~~~~~~~~~ 192 (238)
. ...+.++++|+|+|+|++|+++|.+... ...+. .
T Consensus 251 ~~~~~~~~~~~~~~~~fd~~~t~~~~gf~~~~~yy~~~s~~~~L~~I~vPtLiI~g~dDpi~p~~~~~~~~~~~-----~ 325 (388)
T PLN02511 251 GEYNIPLVANAKTVRDFDDGLTRVSFGFKSVDAYYSNSSSSDSIKHVRVPLLCIQAANDPIAPARGIPREDIKA-----N 325 (388)
T ss_pred CccCHHHHHhCCCHHHHHHhhhhhcCCCCCHHHHHHHcCchhhhccCCCCeEEEEcCCCCcCCcccCcHhHHhc-----C
Confidence 0 0114568899999999999999876542 23222 2
Q ss_pred CCceEEEcCCCCeeeeecCCCCCHHHHHHHHHHHHHHHHHHHHh
Q 026476 193 VDSFVKIFPKVAHGWTVRYNVEDETAVKAAEEAHHNLLEWFAKY 236 (238)
Q Consensus 193 ~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~ 236 (238)
.+.++.++++++|.-......... ....+.+.+.+||+..
T Consensus 326 p~~~l~~~~~gGH~~~~E~p~~~~----~~~w~~~~i~~Fl~~~ 365 (388)
T PLN02511 326 PNCLLIVTPSGGHLGWVAGPEAPF----GAPWTDPVVMEFLEAL 365 (388)
T ss_pred CCEEEEECCCcceeccccCCCCCC----CCccHHHHHHHHHHHH
Confidence 267799999999965543321000 0013456677777654
No 46
>PLN02442 S-formylglutathione hydrolase
Probab=99.77 E-value=9.6e-17 Score=130.05 Aligned_cols=199 Identities=15% Similarity=0.146 Sum_probs=125.5
Q ss_pred CeeEEEecCC----CCCeeEEEEeccCCCCCch--HHHHHHHHHHCCCEEEeccCC-CCCccCC-------CCCcc-hHh
Q 026476 27 GLNAYVTGSP----DSKLAVLLISDVYGYEAPN--LRKLADKVAAAGFYVAVPDFF-HGDPYVA-------DGGKP-LQE 91 (238)
Q Consensus 27 ~~~~~~~~p~----~~~~~vl~~hg~~g~~~~~--~~~~a~~l~~~G~~v~~~d~~-~g~~~~~-------~~~~~-~~~ 91 (238)
.++.+++.|. .+.|+|+++||+.+....+ ...+.+.++..|+.|+.||.. +|..... +.... ...
T Consensus 31 ~~~~~vy~P~~~~~~~~Pvv~~lHG~~~~~~~~~~~~~~~~~~~~~g~~Vv~pd~~~~g~~~~~~~~~~~~~~~~~~~~~ 110 (283)
T PLN02442 31 SMTFSVYFPPASDSGKVPVLYWLSGLTCTDENFIQKSGAQRAAAARGIALVAPDTSPRGLNVEGEADSWDFGVGAGFYLN 110 (283)
T ss_pred ceEEEEEcCCcccCCCCCEEEEecCCCcChHHHHHhhhHHHHHhhcCeEEEecCCCCCCCCCCCCccccccCCCcceeec
Confidence 4677777675 2458899999977754222 133556777789999999973 2311000 00000 000
Q ss_pred hHhh-----cCCCcchhcHHHHHHHH-HhcCCceEEEEEeeccHHHHHHcc-CCc-CceEEEEeccCCcCc---------
Q 026476 92 WIKD-----HGVDKGFEEAKPVIQAL-KSKGITAIGAAGFCWGAKVVVQLG-KRE-FIQAAVLLHPSFVTV--------- 154 (238)
Q Consensus 92 ~~~~-----~~~~~~~~d~~~~~~~l-~~~~~~~i~l~G~S~GG~~a~~~a-~~~-~i~a~i~~~~~~~~~--------- 154 (238)
.... .......+++..+++.. +..+.++++++|+||||.+++.++ .+| .+++++++.+.....
T Consensus 111 ~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (283)
T PLN02442 111 ATQEKWKNWRMYDYVVKELPKLLSDNFDQLDTSRASIFGHSMGGHGALTIYLKNPDKYKSVSAFAPIANPINCPWGQKAF 190 (283)
T ss_pred cccCCCcccchhhhHHHHHHHHHHHHHHhcCCCceEEEEEChhHHHHHHHHHhCchhEEEEEEECCccCcccCchhhHHH
Confidence 0000 00011234444444433 234678999999999999999987 444 577777776653210
Q ss_pred --------------------ccccccCCcEEEEecCCCCCCCHH-hHHHHHHHHhhcCCCCceEEEcCCCCeeeeecCCC
Q 026476 155 --------------------DDIKGVEVPLSILGAEIDRLSPPA-LVKEFEEALNAKSGVDSFVKIFPKVAHGWTVRYNV 213 (238)
Q Consensus 155 --------------------~~~~~~~~P~L~i~g~~D~~~p~~-~~~~~~~~~~~~~~~~~~~~~~~g~~H~~~~~~~~ 213 (238)
......++|+|+++|++|++++.. +.+.+.+.+ ++.+.++++++++|.+|++.
T Consensus 191 ~~~~g~~~~~~~~~d~~~~~~~~~~~~~pvli~~G~~D~~v~~~~~s~~~~~~l-~~~g~~~~~~~~pg~~H~~~----- 264 (283)
T PLN02442 191 TNYLGSDKADWEEYDATELVSKFNDVSATILIDQGEADKFLKEQLLPENFEEAC-KEAGAPVTLRLQPGYDHSYF----- 264 (283)
T ss_pred HHHcCCChhhHHHcChhhhhhhccccCCCEEEEECCCCccccccccHHHHHHHH-HHcCCCeEEEEeCCCCccHH-----
Confidence 012236789999999999998864 578888888 45677899999999999984
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHhcC
Q 026476 214 EDETAVKAAEEAHHNLLEWFAKYVK 238 (238)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~fl~~~~~ 238 (238)
......++.+.|..+++|
T Consensus 265 -------~~~~~i~~~~~~~~~~~~ 282 (283)
T PLN02442 265 -------FIATFIDDHINHHAQALK 282 (283)
T ss_pred -------HHHHHHHHHHHHHHHHhc
Confidence 345566667777777654
No 47
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.76 E-value=4.6e-17 Score=136.84 Aligned_cols=182 Identities=20% Similarity=0.256 Sum_probs=121.1
Q ss_pred eeCCeeEEEecCC-CCCeeEEEEeccCCCCCchHHHHHHHHHHCCCEEEeccCCCCCccCCCCCcchHhhHhhcCCCcch
Q 026476 24 KLGGLNAYVTGSP-DSKLAVLLISDVYGYEAPNLRKLADKVAAAGFYVAVPDFFHGDPYVADGGKPLQEWIKDHGVDKGF 102 (238)
Q Consensus 24 ~~~~~~~~~~~p~-~~~~~vl~~hg~~g~~~~~~~~~a~~l~~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 102 (238)
.+++...++.... +..++||++||+.++. ..+..++..|... |.|+++|+ +|++.+..... ..+.....
T Consensus 115 ~~~~~~i~~~~~g~~~~~~vl~~HG~~~~~-~~~~~~~~~l~~~-~~v~~~d~-~g~G~s~~~~~-------~~~~~~~~ 184 (371)
T PRK14875 115 RIGGRTVRYLRLGEGDGTPVVLIHGFGGDL-NNWLFNHAALAAG-RPVIALDL-PGHGASSKAVG-------AGSLDELA 184 (371)
T ss_pred eEcCcEEEEecccCCCCCeEEEECCCCCcc-chHHHHHHHHhcC-CEEEEEcC-CCCCCCCCCCC-------CCCHHHHH
Confidence 4444444333222 3457899999987764 5677888888765 99999999 89886632100 11111222
Q ss_pred hcHHHHHHHHHhcCCceEEEEEeeccHHHHHHcc-CCc-CceEEEEeccCCcCc--------------------------
Q 026476 103 EEAKPVIQALKSKGITAIGAAGFCWGAKVVVQLG-KRE-FIQAAVLLHPSFVTV-------------------------- 154 (238)
Q Consensus 103 ~d~~~~~~~l~~~~~~~i~l~G~S~GG~~a~~~a-~~~-~i~a~i~~~~~~~~~-------------------------- 154 (238)
+++ .+.+...+..++.++|||+||.+++.++ ..+ .+++++++.+.....
T Consensus 185 ~~~---~~~~~~~~~~~~~lvG~S~Gg~~a~~~a~~~~~~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (371)
T PRK14875 185 AAV---LAFLDALGIERAHLVGHSMGGAVALRLAARAPQRVASLTLIAPAGLGPEINGDYIDGFVAAESRRELKPVLELL 261 (371)
T ss_pred HHH---HHHHHhcCCccEEEEeechHHHHHHHHHHhCchheeEEEEECcCCcCcccchhHHHHhhcccchhHHHHHHHHH
Confidence 233 3334444667999999999999999877 444 688888775431000
Q ss_pred ----------------------------------------------ccccccCCcEEEEecCCCCCCCHHhHHHHHHHHh
Q 026476 155 ----------------------------------------------DDIKGVEVPLSILGAEIDRLSPPALVKEFEEALN 188 (238)
Q Consensus 155 ----------------------------------------------~~~~~~~~P~L~i~g~~D~~~p~~~~~~~~~~~~ 188 (238)
..+.++++|+|+++|++|.++|++..+.+..
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~vp~~~~~~l~~--- 338 (371)
T PRK14875 262 FADPALVTRQMVEDLLKYKRLDGVDDALRALADALFAGGRQRVDLRDRLASLAIPVLVIWGEQDRIIPAAHAQGLPD--- 338 (371)
T ss_pred hcChhhCCHHHHHHHHHHhccccHHHHHHHHHHHhccCcccchhHHHHHhcCCCCEEEEEECCCCccCHHHHhhccC---
Confidence 0134578999999999999999876554321
Q ss_pred hcCCCCceEEEcCCCCeeeeecCCCCCHHHHHHHHHHHHHHHHHHHHh
Q 026476 189 AKSGVDSFVKIFPKVAHGWTVRYNVEDETAVKAAEEAHHNLLEWFAKY 236 (238)
Q Consensus 189 ~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~ 236 (238)
..+++++++++|..... ..++..+.+.+||+++
T Consensus 339 -----~~~~~~~~~~gH~~~~e----------~p~~~~~~i~~fl~~~ 371 (371)
T PRK14875 339 -----GVAVHVLPGAGHMPQME----------AAADVNRLLAEFLGKA 371 (371)
T ss_pred -----CCeEEEeCCCCCChhhh----------CHHHHHHHHHHHhccC
Confidence 45688999999987643 2357788888998753
No 48
>PRK06489 hypothetical protein; Provisional
Probab=99.76 E-value=1.6e-17 Score=139.24 Aligned_cols=193 Identities=18% Similarity=0.243 Sum_probs=120.4
Q ss_pred eCCeeEEEecCCC-C-------CeeEEEEeccCCCCCchH-HHHHHHH-------HHCCCEEEeccCCCCCccCCCCCcc
Q 026476 25 LGGLNAYVTGSPD-S-------KLAVLLISDVYGYEAPNL-RKLADKV-------AAAGFYVAVPDFFHGDPYVADGGKP 88 (238)
Q Consensus 25 ~~~~~~~~~~p~~-~-------~~~vl~~hg~~g~~~~~~-~~~a~~l-------~~~G~~v~~~d~~~g~~~~~~~~~~ 88 (238)
.+++..++..-.. . .|+|||+||+.+....+. ..+.+.| .+.+|.|+++|+ +|+|.+......
T Consensus 47 ~~g~~i~y~~~G~~~~~~~~~~gpplvllHG~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~Via~Dl-~GhG~S~~p~~~ 125 (360)
T PRK06489 47 LPELRLHYTTLGTPHRNADGEIDNAVLVLHGTGGSGKSFLSPTFAGELFGPGQPLDASKYFIILPDG-IGHGKSSKPSDG 125 (360)
T ss_pred cCCceEEEEecCCCCcccccCCCCeEEEeCCCCCchhhhccchhHHHhcCCCCcccccCCEEEEeCC-CCCCCCCCCCcC
Confidence 4456666543222 2 588999999887642222 2455544 246799999999 999876432110
Q ss_pred hHhhHhhcCCCcchhcHH-HHHHHH-HhcCCceEE-EEEeeccHHHHHHcc-CCc-CceEEEEeccCC------------
Q 026476 89 LQEWIKDHGVDKGFEEAK-PVIQAL-KSKGITAIG-AAGFCWGAKVVVQLG-KRE-FIQAAVLLHPSF------------ 151 (238)
Q Consensus 89 ~~~~~~~~~~~~~~~d~~-~~~~~l-~~~~~~~i~-l~G~S~GG~~a~~~a-~~~-~i~a~i~~~~~~------------ 151 (238)
.......+. .+++. .+++.+ .+.+.+++. ++||||||.+++.++ ..| .++++|++.+..
T Consensus 126 ~~~~~~~~~----~~~~a~~~~~~l~~~lgi~~~~~lvG~SmGG~vAl~~A~~~P~~V~~LVLi~s~~~~~~~~~~~~~~ 201 (360)
T PRK06489 126 LRAAFPRYD----YDDMVEAQYRLVTEGLGVKHLRLILGTSMGGMHAWMWGEKYPDFMDALMPMASQPTEMSGRNWMWRR 201 (360)
T ss_pred CCCCCCccc----HHHHHHHHHHHHHHhcCCCceeEEEEECHHHHHHHHHHHhCchhhheeeeeccCcccccHHHHHHHH
Confidence 000000111 22322 333333 334667875 899999999999987 444 566666543210
Q ss_pred ---------------------------------------------cC---------------------------------
Q 026476 152 ---------------------------------------------VT--------------------------------- 153 (238)
Q Consensus 152 ---------------------------------------------~~--------------------------------- 153 (238)
..
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (360)
T PRK06489 202 MLIESIRNDPAWNNGNYTTQPPSLKRANPMFAIATSGGTLAYQAQAPTRAAADKLVDERLAAPVTADANDFLYQWDSSRD 281 (360)
T ss_pred HHHHHHHhCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHhcCChHHHHHHHHHHHHhhhhcCHHHHHHHHHHhhc
Confidence 00
Q ss_pred ---cccccccCCcEEEEecCCCCCCCHHhH--HHHHHHHhhcCCCCceEEEcCCC----CeeeeecCCCCCHHHHHHHHH
Q 026476 154 ---VDDIKGVEVPLSILGAEIDRLSPPALV--KEFEEALNAKSGVDSFVKIFPKV----AHGWTVRYNVEDETAVKAAEE 224 (238)
Q Consensus 154 ---~~~~~~~~~P~L~i~g~~D~~~p~~~~--~~~~~~~~~~~~~~~~~~~~~g~----~H~~~~~~~~~~~~~~~~~~~ 224 (238)
.+.+.++++|+|+|+|++|.++|++.. +.+.+.++ +.++++++++ +|... . ..++
T Consensus 282 ~d~~~~L~~I~~PvLvI~G~~D~~~p~~~~~~~~la~~ip-----~a~l~~i~~a~~~~GH~~~-e----------~P~~ 345 (360)
T PRK06489 282 YNPSPDLEKIKAPVLAINSADDERNPPETGVMEAALKRVK-----HGRLVLIPASPETRGHGTT-G----------SAKF 345 (360)
T ss_pred cChHHHHHhCCCCEEEEecCCCcccChhhHHHHHHHHhCc-----CCeEEEECCCCCCCCcccc-c----------CHHH
Confidence 001346789999999999999998865 66776662 4578899985 99874 2 2357
Q ss_pred HHHHHHHHHHHhcC
Q 026476 225 AHHNLLEWFAKYVK 238 (238)
Q Consensus 225 ~~~~~~~fl~~~~~ 238 (238)
..+.+.+||++..|
T Consensus 346 ~~~~i~~FL~~~~~ 359 (360)
T PRK06489 346 WKAYLAEFLAQVPK 359 (360)
T ss_pred HHHHHHHHHHhccc
Confidence 78889999987643
No 49
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=99.76 E-value=2.2e-17 Score=121.37 Aligned_cols=170 Identities=18% Similarity=0.240 Sum_probs=124.3
Q ss_pred CCeeEEEEec---cCC-CCCchHHHHHHHHHHCCCEEEeccCCCCCccCCCCCcchHhhHhhcCCCcchhcHHHHHHHHH
Q 026476 38 SKLAVLLISD---VYG-YEAPNLRKLADKVAAAGFYVAVPDFFHGDPYVADGGKPLQEWIKDHGVDKGFEEAKPVIQALK 113 (238)
Q Consensus 38 ~~~~vl~~hg---~~g-~~~~~~~~~a~~l~~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~ 113 (238)
..|..|++|. ..| .+..-...+++.|.++||.++.+|+ ||-|.+.+. |-.. ..-.+|+.++++|++
T Consensus 27 ~~~iAli~HPHPl~gGtm~nkvv~~la~~l~~~G~atlRfNf-RgVG~S~G~------fD~G---iGE~~Da~aaldW~~ 96 (210)
T COG2945 27 AAPIALICHPHPLFGGTMNNKVVQTLARALVKRGFATLRFNF-RGVGRSQGE------FDNG---IGELEDAAAALDWLQ 96 (210)
T ss_pred CCceEEecCCCccccCccCCHHHHHHHHHHHhCCceEEeecc-cccccccCc------ccCC---cchHHHHHHHHHHHH
Confidence 4567778874 123 2234557899999999999999999 998877653 1111 124589999999999
Q ss_pred hc-CCce-EEEEEeeccHHHHHHcc-CCcCceEEEEeccCCc--CcccccccCCcEEEEecCCCCCCCHHhHHHHHHHHh
Q 026476 114 SK-GITA-IGAAGFCWGAKVVVQLG-KREFIQAAVLLHPSFV--TVDDIKGVEVPLSILGAEIDRLSPPALVKEFEEALN 188 (238)
Q Consensus 114 ~~-~~~~-i~l~G~S~GG~~a~~~a-~~~~i~a~i~~~~~~~--~~~~~~~~~~P~L~i~g~~D~~~p~~~~~~~~~~~~ 188 (238)
++ +..+ .++.|||+|+++++.++ +.+.+...+.+.+... +...+.....|.|+|+|+.|.+++...+.+.++.
T Consensus 97 ~~hp~s~~~~l~GfSFGa~Ia~~la~r~~e~~~~is~~p~~~~~dfs~l~P~P~~~lvi~g~~Ddvv~l~~~l~~~~~-- 174 (210)
T COG2945 97 ARHPDSASCWLAGFSFGAYIAMQLAMRRPEILVFISILPPINAYDFSFLAPCPSPGLVIQGDADDVVDLVAVLKWQES-- 174 (210)
T ss_pred hhCCCchhhhhcccchHHHHHHHHHHhcccccceeeccCCCCchhhhhccCCCCCceeEecChhhhhcHHHHHHhhcC--
Confidence 98 3334 47899999999999988 5666666665554433 3345667788999999999988887776665553
Q ss_pred hcCCCCceEEEcCCCCeeeeecCCCCCHHHHHHHHHHHHHHHHHHH
Q 026476 189 AKSGVDSFVKIFPKVAHGWTVRYNVEDETAVKAAEEAHHNLLEWFA 234 (238)
Q Consensus 189 ~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~ 234 (238)
.+.+++..+++.|-|..+ .....+.+.+||.
T Consensus 175 ----~~~~~i~i~~a~HFF~gK-----------l~~l~~~i~~~l~ 205 (210)
T COG2945 175 ----IKITVITIPGADHFFHGK-----------LIELRDTIADFLE 205 (210)
T ss_pred ----CCCceEEecCCCceeccc-----------HHHHHHHHHHHhh
Confidence 367788999999999764 3567788888884
No 50
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=99.76 E-value=8.3e-17 Score=128.28 Aligned_cols=195 Identities=16% Similarity=0.234 Sum_probs=139.5
Q ss_pred CceEEeeCCeeEEEecCC-CCCeeEEEEeccCCCCCchHHHHHHHHHHCCCEEEeccCCCCCccCCCCCcchHhhHhhcC
Q 026476 19 AGHVEKLGGLNAYVTGSP-DSKLAVLLISDVYGYEAPNLRKLADKVAAAGFYVAVPDFFHGDPYVADGGKPLQEWIKDHG 97 (238)
Q Consensus 19 ~~~~~~~~~~~~~~~~p~-~~~~~vl~~hg~~g~~~~~~~~~a~~l~~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~ 97 (238)
...+.+.+++...+..-. +.+|.|+++||..... -.++.....|+++||+|+++|+ +|.|.+... .....++
T Consensus 23 ~hk~~~~~gI~~h~~e~g~~~gP~illlHGfPe~w-yswr~q~~~la~~~~rviA~Dl-rGyG~Sd~P-----~~~~~Yt 95 (322)
T KOG4178|consen 23 SHKFVTYKGIRLHYVEGGPGDGPIVLLLHGFPESW-YSWRHQIPGLASRGYRVIAPDL-RGYGFSDAP-----PHISEYT 95 (322)
T ss_pred ceeeEEEccEEEEEEeecCCCCCEEEEEccCCccc-hhhhhhhhhhhhcceEEEecCC-CCCCCCCCC-----CCcceee
Confidence 345557788777776432 3568999999988764 4668899999999999999999 999876543 1222444
Q ss_pred CCcchhcHHHHHHHHHhcCCceEEEEEeeccHHHHHHcc--CCcCceEEEEeccCCcC----------------------
Q 026476 98 VDKGFEEAKPVIQALKSKGITAIGAAGFCWGAKVVVQLG--KREFIQAAVLLHPSFVT---------------------- 153 (238)
Q Consensus 98 ~~~~~~d~~~~~~~l~~~~~~~i~l~G~S~GG~~a~~~a--~~~~i~a~i~~~~~~~~---------------------- 153 (238)
......|+..+++.+ +.+++.++||+||+.+|+.++ ..+++++.|++......
T Consensus 96 ~~~l~~di~~lld~L---g~~k~~lvgHDwGaivaw~la~~~Perv~~lv~~nv~~~~p~~~~~~~~~~~f~~~~y~~~f 172 (322)
T KOG4178|consen 96 IDELVGDIVALLDHL---GLKKAFLVGHDWGAIVAWRLALFYPERVDGLVTLNVPFPNPKLKPLDSSKAIFGKSYYICLF 172 (322)
T ss_pred HHHHHHHHHHHHHHh---ccceeEEEeccchhHHHHHHHHhChhhcceEEEecCCCCCcccchhhhhccccCccceeEec
Confidence 455677777777776 578999999999999999988 34478888776432110
Q ss_pred ------------------------------------------------------------------------------cc
Q 026476 154 ------------------------------------------------------------------------------VD 155 (238)
Q Consensus 154 ------------------------------------------------------------------------------~~ 155 (238)
+-
T Consensus 173 Q~~~~~E~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~t~edi~~~~~~f~~~g~~gplNyyrn~~r~w~a~~~ 252 (322)
T KOG4178|consen 173 QEPGKPETELSKDDTEMLVKTFRTRKTPGPLIVPKQPNENPLWLTEEDIAFYVSKFQIDGFTGPLNYYRNFRRNWEAAPW 252 (322)
T ss_pred cccCcchhhhccchhHHhHHhhhccccCCccccCCCCCCccchhhHHHHHHHHhccccccccccchhhHHHhhCchhccc
Confidence 00
Q ss_pred cccccCCcEEEEecCCCCCCCHHhHHHHHHHHhhcCCCCceEEEcCCCCeeeeecCCCCCHHHHHHHHHHHHHHHHHHHH
Q 026476 156 DIKGVEVPLSILGAEIDRLSPPALVKEFEEALNAKSGVDSFVKIFPKVAHGWTVRYNVEDETAVKAAEEAHHNLLEWFAK 235 (238)
Q Consensus 156 ~~~~~~~P~L~i~g~~D~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~ 235 (238)
.+.++++|+++|+|++|.+.+.......++..... ..+.++++|++|....+ ..++..+.+++|+++
T Consensus 253 ~~~~i~iPv~fi~G~~D~v~~~p~~~~~~rk~vp~---l~~~vv~~~~gH~vqqe----------~p~~v~~~i~~f~~~ 319 (322)
T KOG4178|consen 253 ALAKITIPVLFIWGDLDPVLPYPIFGELYRKDVPR---LTERVVIEGIGHFVQQE----------KPQEVNQAILGFINS 319 (322)
T ss_pred cccccccceEEEEecCcccccchhHHHHHHHhhcc---ccceEEecCCccccccc----------CHHHHHHHHHHHHHh
Confidence 13467889999999999987766333333332121 23577899999988653 236889999999987
Q ss_pred h
Q 026476 236 Y 236 (238)
Q Consensus 236 ~ 236 (238)
.
T Consensus 320 ~ 320 (322)
T KOG4178|consen 320 F 320 (322)
T ss_pred h
Confidence 5
No 51
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.75 E-value=6.9e-17 Score=127.80 Aligned_cols=161 Identities=11% Similarity=0.113 Sum_probs=111.0
Q ss_pred CeeEEEEeccCCCCCchHHHHHHHHHHCCCEEEeccCCCCCccCCCCCcchHhhHhhcCCCcchhcHHHHHHHHHhcCCc
Q 026476 39 KLAVLLISDVYGYEAPNLRKLADKVAAAGFYVAVPDFFHGDPYVADGGKPLQEWIKDHGVDKGFEEAKPVIQALKSKGIT 118 (238)
Q Consensus 39 ~~~vl~~hg~~g~~~~~~~~~a~~l~~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~ 118 (238)
.|+||++||+.++. ..+..+++.| + +|.|+++|+ +|+|.+.... ........+|+. +.+++.+.+
T Consensus 2 ~p~vvllHG~~~~~-~~w~~~~~~l-~-~~~vi~~D~-~G~G~S~~~~--------~~~~~~~~~~l~---~~l~~~~~~ 66 (242)
T PRK11126 2 LPWLVFLHGLLGSG-QDWQPVGEAL-P-DYPRLYIDL-PGHGGSAAIS--------VDGFADVSRLLS---QTLQSYNIL 66 (242)
T ss_pred CCEEEEECCCCCCh-HHHHHHHHHc-C-CCCEEEecC-CCCCCCCCcc--------ccCHHHHHHHHH---HHHHHcCCC
Confidence 46799999988775 5778888888 3 699999999 9998764321 012222334444 444455678
Q ss_pred eEEEEEeeccHHHHHHcc-CC-cC-ceEEEEeccCCc--C----------------------------------------
Q 026476 119 AIGAAGFCWGAKVVVQLG-KR-EF-IQAAVLLHPSFV--T---------------------------------------- 153 (238)
Q Consensus 119 ~i~l~G~S~GG~~a~~~a-~~-~~-i~a~i~~~~~~~--~---------------------------------------- 153 (238)
++.++||||||.+++.++ .. +. ++++++..+... .
T Consensus 67 ~~~lvG~S~Gg~va~~~a~~~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (242)
T PRK11126 67 PYWLVGYSLGGRIAMYYACQGLAGGLCGLIVEGGNPGLQNAEERQARWQNDRQWAQRFRQEPLEQVLADWYQQPVFASLN 146 (242)
T ss_pred CeEEEEECHHHHHHHHHHHhCCcccccEEEEeCCCCCCCCHHHHHHHHhhhHHHHHHhccCcHHHHHHHHHhcchhhccC
Confidence 999999999999999987 33 33 888776532210 0
Q ss_pred c----------------------------------ccccccCCcEEEEecCCCCCCCHHhHHHHHHHHhhcCCCCceEEE
Q 026476 154 V----------------------------------DDIKGVEVPLSILGAEIDRLSPPALVKEFEEALNAKSGVDSFVKI 199 (238)
Q Consensus 154 ~----------------------------------~~~~~~~~P~L~i~g~~D~~~p~~~~~~~~~~~~~~~~~~~~~~~ 199 (238)
. +.+.++++|+|+++|++|+.+. .+.+. . +.++++
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~-----~~~~~----~--~~~~~~ 215 (242)
T PRK11126 147 AEQRQQLVAKRSNNNGAAVAAMLEATSLAKQPDLRPALQALTFPFYYLCGERDSKFQ-----ALAQQ----L--ALPLHV 215 (242)
T ss_pred ccHHHHHHHhcccCCHHHHHHHHHhcCcccCCcHHHHhhccCCCeEEEEeCCcchHH-----HHHHH----h--cCeEEE
Confidence 0 0134578999999999998541 22221 1 467889
Q ss_pred cCCCCeeeeecCCCCCHHHHHHHHHHHHHHHHHHHH
Q 026476 200 FPKVAHGWTVRYNVEDETAVKAAEEAHHNLLEWFAK 235 (238)
Q Consensus 200 ~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~ 235 (238)
+++++|.+.... .++..+.+.+||++
T Consensus 216 i~~~gH~~~~e~----------p~~~~~~i~~fl~~ 241 (242)
T PRK11126 216 IPNAGHNAHREN----------PAAFAASLAQILRL 241 (242)
T ss_pred eCCCCCchhhhC----------hHHHHHHHHHHHhh
Confidence 999999887632 36788889999865
No 52
>PRK03204 haloalkane dehalogenase; Provisional
Probab=99.75 E-value=1.4e-16 Score=129.38 Aligned_cols=186 Identities=15% Similarity=0.172 Sum_probs=122.2
Q ss_pred CceEEeeCCeeEEEecCCCCCeeEEEEeccCCCCCchHHHHHHHHHHCCCEEEeccCCCCCccCCCCCcchHhhHhhcCC
Q 026476 19 AGHVEKLGGLNAYVTGSPDSKLAVLLISDVYGYEAPNLRKLADKVAAAGFYVAVPDFFHGDPYVADGGKPLQEWIKDHGV 98 (238)
Q Consensus 19 ~~~~~~~~~~~~~~~~p~~~~~~vl~~hg~~g~~~~~~~~~a~~l~~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~ 98 (238)
...+..+++...++.. .+.+++|||+||+.... ..+..+...|.+ +|.|+++|+ +|+|.+..... .
T Consensus 15 ~~~~~~~~~~~i~y~~-~G~~~~iv~lHG~~~~~-~~~~~~~~~l~~-~~~vi~~D~-~G~G~S~~~~~----------~ 80 (286)
T PRK03204 15 ESRWFDSSRGRIHYID-EGTGPPILLCHGNPTWS-FLYRDIIVALRD-RFRCVAPDY-LGFGLSERPSG----------F 80 (286)
T ss_pred cceEEEcCCcEEEEEE-CCCCCEEEEECCCCccH-HHHHHHHHHHhC-CcEEEEECC-CCCCCCCCCCc----------c
Confidence 4455566666655543 33468899999976543 456788888865 599999999 89987643210 0
Q ss_pred CcchhcHHHHHHH-HHhcCCceEEEEEeeccHHHHHHcc-CCc-CceEEEEeccCCcC----------------------
Q 026476 99 DKGFEEAKPVIQA-LKSKGITAIGAAGFCWGAKVVVQLG-KRE-FIQAAVLLHPSFVT---------------------- 153 (238)
Q Consensus 99 ~~~~~d~~~~~~~-l~~~~~~~i~l~G~S~GG~~a~~~a-~~~-~i~a~i~~~~~~~~---------------------- 153 (238)
....++..+.+.. +...+.+++.++||||||.+++.++ ..| .++++|++.+....
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (286)
T PRK03204 81 GYQIDEHARVIGEFVDHLGLDRYLSMGQDWGGPISMAVAVERADRVRGVVLGNTWFWPADTLAMKAFSRVMSSPPVQYAI 160 (286)
T ss_pred ccCHHHHHHHHHHHHHHhCCCCEEEEEECccHHHHHHHHHhChhheeEEEEECccccCCCchhHHHHHHHhccccchhhh
Confidence 0112333333332 3334678899999999999999987 333 67777764321100
Q ss_pred ------------------cc-------------------------c-------ccc---------cCCcEEEEecCCCCC
Q 026476 154 ------------------VD-------------------------D-------IKG---------VEVPLSILGAEIDRL 174 (238)
Q Consensus 154 ------------------~~-------------------------~-------~~~---------~~~P~L~i~g~~D~~ 174 (238)
.. . +.+ +++|+|+|+|++|.+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PtliI~G~~D~~ 240 (286)
T PRK03204 161 LRRNFFVERLIPAGTEHRPSSAVMAHYRAVQPNAAARRGVAEMPKQILAARPLLARLAREVPATLGTKPTLLVWGMKDVA 240 (286)
T ss_pred hhhhHHHHHhccccccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHhcchhhHHHHHhhhhhhhhcCCCCeEEEecCCCcc
Confidence 00 0 001 179999999999998
Q ss_pred CCHH-hHHHHHHHHhhcCCCCceEEEcCCCCeeeeecCCCCCHHHHHHHHHHHHHHHHHH
Q 026476 175 SPPA-LVKEFEEALNAKSGVDSFVKIFPKVAHGWTVRYNVEDETAVKAAEEAHHNLLEWF 233 (238)
Q Consensus 175 ~p~~-~~~~~~~~~~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl 233 (238)
+++. ..+.+.+.++ +.+++++++++|..... ..++..+.+.+||
T Consensus 241 ~~~~~~~~~~~~~ip-----~~~~~~i~~aGH~~~~e----------~Pe~~~~~i~~~~ 285 (286)
T PRK03204 241 FRPKTILPRLRATFP-----DHVLVELPNAKHFIQED----------APDRIAAAIIERF 285 (286)
T ss_pred cCcHHHHHHHHHhcC-----CCeEEEcCCCccccccc----------CHHHHHHHHHHhc
Confidence 8654 4666777662 45788999999998764 2357777888886
No 53
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.75 E-value=5.3e-17 Score=127.63 Aligned_cols=167 Identities=16% Similarity=0.251 Sum_probs=109.9
Q ss_pred eeEEEEeccCCCCCchHHHHHHHHHHCCCEEEeccCCCCCccCCCCCcchHhhHhhcCCCcchhcHHHHHHHH-HhcCCc
Q 026476 40 LAVLLISDVYGYEAPNLRKLADKVAAAGFYVAVPDFFHGDPYVADGGKPLQEWIKDHGVDKGFEEAKPVIQAL-KSKGIT 118 (238)
Q Consensus 40 ~~vl~~hg~~g~~~~~~~~~a~~l~~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l-~~~~~~ 118 (238)
|+||++||..+.. ..+..+++.|+ .||.|+++|+ +|+|.+..... ....+..+.++ .+++.+ +..+.+
T Consensus 2 ~~vv~~hG~~~~~-~~~~~~~~~L~-~~~~v~~~d~-~g~G~s~~~~~-----~~~~~~~~~~~---~~~~~~~~~~~~~ 70 (251)
T TIGR03695 2 PVLVFLHGFLGSG-ADWQALIELLG-PHFRCLAIDL-PGHGSSQSPDE-----IERYDFEEAAQ---DILATLLDQLGIE 70 (251)
T ss_pred CEEEEEcCCCCch-hhHHHHHHHhc-ccCeEEEEcC-CCCCCCCCCCc-----cChhhHHHHHH---HHHHHHHHHcCCC
Confidence 6799999988774 67889999998 8999999999 88886643200 00111111222 213333 233667
Q ss_pred eEEEEEeeccHHHHHHcc-CCc-CceEEEEeccCCc--------------------------------------------
Q 026476 119 AIGAAGFCWGAKVVVQLG-KRE-FIQAAVLLHPSFV-------------------------------------------- 152 (238)
Q Consensus 119 ~i~l~G~S~GG~~a~~~a-~~~-~i~a~i~~~~~~~-------------------------------------------- 152 (238)
++.++|||+||.+++.++ ..+ .+++++++.+...
T Consensus 71 ~~~l~G~S~Gg~ia~~~a~~~~~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (251)
T TIGR03695 71 PFFLVGYSMGGRIALYYALQYPERVQGLILESGSPGLATEEERAARRQNDEQLAQRFEQEGLEAFLDDWYQQPLFASQKN 150 (251)
T ss_pred eEEEEEeccHHHHHHHHHHhCchheeeeEEecCCCCcCchHhhhhhhhcchhhhhHHHhcCccHHHHHHhcCceeeeccc
Confidence 999999999999999987 334 4666666543210
Q ss_pred -Cc----------------------------------ccccccCCcEEEEecCCCCCCCHHhHHHHHHHHhhcCCCCceE
Q 026476 153 -TV----------------------------------DDIKGVEVPLSILGAEIDRLSPPALVKEFEEALNAKSGVDSFV 197 (238)
Q Consensus 153 -~~----------------------------------~~~~~~~~P~L~i~g~~D~~~p~~~~~~~~~~~~~~~~~~~~~ 197 (238)
.. ..+.++++|+|+++|++|..++ +..+.+.+.+ .+.++
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~-~~~~~~~~~~-----~~~~~ 224 (251)
T TIGR03695 151 LPPEQRQALRAKRLANNPEGLAKMLRATGLGKQPSLWPKLQALTIPVLYLCGEKDEKFV-QIAKEMQKLL-----PNLTL 224 (251)
T ss_pred CChHHhHHHHHhcccccchHHHHHHHHhhhhcccchHHHhhCCCCceEEEeeCcchHHH-HHHHHHHhcC-----CCCcE
Confidence 00 0134578999999999998653 3334343322 25678
Q ss_pred EEcCCCCeeeeecCCCCCHHHHHHHHHHHHHHHHHH
Q 026476 198 KIFPKVAHGWTVRYNVEDETAVKAAEEAHHNLLEWF 233 (238)
Q Consensus 198 ~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl 233 (238)
+.+++++|...... .++..+.+.+||
T Consensus 225 ~~~~~~gH~~~~e~----------~~~~~~~i~~~l 250 (251)
T TIGR03695 225 VIIANAGHNIHLEN----------PEAFAKILLAFL 250 (251)
T ss_pred EEEcCCCCCcCccC----------hHHHHHHHHHHh
Confidence 89999999876532 246777788876
No 54
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=99.75 E-value=1.6e-16 Score=136.08 Aligned_cols=186 Identities=15% Similarity=0.164 Sum_probs=120.9
Q ss_pred CCeeEEEe--cCCC--CCeeEEEEeccCCCCCchHH-HHHHHHH---HCCCEEEeccCCCCCccCCCCCcchHhhHhhcC
Q 026476 26 GGLNAYVT--GSPD--SKLAVLLISDVYGYEAPNLR-KLADKVA---AAGFYVAVPDFFHGDPYVADGGKPLQEWIKDHG 97 (238)
Q Consensus 26 ~~~~~~~~--~p~~--~~~~vl~~hg~~g~~~~~~~-~~a~~l~---~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~ 97 (238)
+++..++. .|.. .+++|||+||+.+.. ..+. .+...|+ +.+|.|+++|+ +|+|.++..... .+.
T Consensus 184 ~~~~l~~~~~gp~~~~~k~~VVLlHG~~~s~-~~W~~~~~~~L~~~~~~~yrVia~Dl-~G~G~S~~p~~~------~yt 255 (481)
T PLN03087 184 SNESLFVHVQQPKDNKAKEDVLFIHGFISSS-AFWTETLFPNFSDAAKSTYRLFAVDL-LGFGRSPKPADS------LYT 255 (481)
T ss_pred CCeEEEEEEecCCCCCCCCeEEEECCCCccH-HHHHHHHHHHHHHHhhCCCEEEEECC-CCCCCCcCCCCC------cCC
Confidence 34444444 4443 247899999987764 3444 3445554 46999999999 999877532100 112
Q ss_pred CCcchhcHHHHHHHHHhcCCceEEEEEeeccHHHHHHcc-CCc-CceEEEEeccCCc----------------------C
Q 026476 98 VDKGFEEAKPVIQALKSKGITAIGAAGFCWGAKVVVQLG-KRE-FIQAAVLLHPSFV----------------------T 153 (238)
Q Consensus 98 ~~~~~~d~~~~~~~l~~~~~~~i~l~G~S~GG~~a~~~a-~~~-~i~a~i~~~~~~~----------------------~ 153 (238)
.+...+++.. ..+...+.+++.++||||||.+++.++ .+| .++++|++.+... .
T Consensus 256 l~~~a~~l~~--~ll~~lg~~k~~LVGhSmGG~iAl~~A~~~Pe~V~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (481)
T PLN03087 256 LREHLEMIER--SVLERYKVKSFHIVAHSLGCILALALAVKHPGAVKSLTLLAPPYYPVPKGVQATQYVMRKVAPRRVWP 333 (481)
T ss_pred HHHHHHHHHH--HHHHHcCCCCEEEEEECHHHHHHHHHHHhChHhccEEEEECCCccccccchhHHHHHHHHhcccccCC
Confidence 2222333321 233444678999999999999999987 444 5777776642110 0
Q ss_pred ----------------c--------------------------------------c-c----------------------
Q 026476 154 ----------------V--------------------------------------D-D---------------------- 156 (238)
Q Consensus 154 ----------------~--------------------------------------~-~---------------------- 156 (238)
. . .
T Consensus 334 ~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~l~~~i~~~~~~l~~~l~~l 413 (481)
T PLN03087 334 PIAFGASVACWYEHISRTICLVICKNHRLWEFLTRLLTRNRMRTFLIEGFFCHTHNAAWHTLHNIICGSGSKLDGYLDHV 413 (481)
T ss_pred ccccchhHHHHHHHHHhhhhcccccchHHHHHHHHHhhhhhhhHHHHHHHHhccchhhHHHHHHHHhchhhhhhhHHHHH
Confidence 0 0 0
Q ss_pred ccccCCcEEEEecCCCCCCCHHhHHHHHHHHhhcCCCCceEEEcCCCCeeeeecCCCCCHHHHHHHHHHHHHHHHHHHH
Q 026476 157 IKGVEVPLSILGAEIDRLSPPALVKEFEEALNAKSGVDSFVKIFPKVAHGWTVRYNVEDETAVKAAEEAHHNLLEWFAK 235 (238)
Q Consensus 157 ~~~~~~P~L~i~g~~D~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~ 235 (238)
..++++|+|+++|++|.++|++..+.+.+.++ +.+++++++++|...... ..++..+.+.+|+..
T Consensus 414 ~~~I~vPtLII~Ge~D~ivP~~~~~~la~~iP-----~a~l~vI~~aGH~~~v~e---------~p~~fa~~L~~F~~~ 478 (481)
T PLN03087 414 RDQLKCDVAIFHGGDDELIPVECSYAVKAKVP-----RARVKVIDDKDHITIVVG---------RQKEFARELEEIWRR 478 (481)
T ss_pred HHhCCCCEEEEEECCCCCCCHHHHHHHHHhCC-----CCEEEEeCCCCCcchhhc---------CHHHHHHHHHHHhhc
Confidence 01478999999999999999999999888772 467899999999865311 235677777777753
No 55
>PLN02578 hydrolase
Probab=99.74 E-value=2.5e-16 Score=131.67 Aligned_cols=181 Identities=15% Similarity=0.135 Sum_probs=122.7
Q ss_pred eeCCeeEEEecCCCCCeeEEEEeccCCCCCchHHHHHHHHHHCCCEEEeccCCCCCccCCCCCcchHhhHhhcCCCcchh
Q 026476 24 KLGGLNAYVTGSPDSKLAVLLISDVYGYEAPNLRKLADKVAAAGFYVAVPDFFHGDPYVADGGKPLQEWIKDHGVDKGFE 103 (238)
Q Consensus 24 ~~~~~~~~~~~p~~~~~~vl~~hg~~g~~~~~~~~~a~~l~~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (238)
...+....+... +++++||++||..++. ..+..++..|++ +|.|+++|+ +|+|.+.... ..++.....+
T Consensus 72 ~~~~~~i~Y~~~-g~g~~vvliHG~~~~~-~~w~~~~~~l~~-~~~v~~~D~-~G~G~S~~~~-------~~~~~~~~a~ 140 (354)
T PLN02578 72 TWRGHKIHYVVQ-GEGLPIVLIHGFGASA-FHWRYNIPELAK-KYKVYALDL-LGFGWSDKAL-------IEYDAMVWRD 140 (354)
T ss_pred EECCEEEEEEEc-CCCCeEEEECCCCCCH-HHHHHHHHHHhc-CCEEEEECC-CCCCCCCCcc-------cccCHHHHHH
Confidence 444555544433 3557899999977663 567788888865 599999999 8998765321 0122222334
Q ss_pred cHHHHHHHHHhcCCceEEEEEeeccHHHHHHcc-CCc-CceEEEEeccCCc-----------------------------
Q 026476 104 EAKPVIQALKSKGITAIGAAGFCWGAKVVVQLG-KRE-FIQAAVLLHPSFV----------------------------- 152 (238)
Q Consensus 104 d~~~~~~~l~~~~~~~i~l~G~S~GG~~a~~~a-~~~-~i~a~i~~~~~~~----------------------------- 152 (238)
|+.++ +++...+++.++|||+||.+++.+| ..| .+++++++.+...
T Consensus 141 ~l~~~---i~~~~~~~~~lvG~S~Gg~ia~~~A~~~p~~v~~lvLv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (354)
T PLN02578 141 QVADF---VKEVVKEPAVLVGNSLGGFTALSTAVGYPELVAGVALLNSAGQFGSESREKEEAIVVEETVLTRFVVKPLKE 217 (354)
T ss_pred HHHHH---HHHhccCCeEEEEECHHHHHHHHHHHhChHhcceEEEECCCccccccccccccccccccchhhHHHhHHHHH
Confidence 44444 4444567899999999999999988 333 5666665432100
Q ss_pred -----------------------------C-----------------------------------------cccccccCC
Q 026476 153 -----------------------------T-----------------------------------------VDDIKGVEV 162 (238)
Q Consensus 153 -----------------------------~-----------------------------------------~~~~~~~~~ 162 (238)
. .+.+.++++
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~ 297 (354)
T PLN02578 218 WFQRVVLGFLFWQAKQPSRIESVLKSVYKDKSNVDDYLVESITEPAADPNAGEVYYRLMSRFLFNQSRYTLDSLLSKLSC 297 (354)
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHhcCCcccCCHHHHHHHHhcccCCchHHHHHHHHHHHhcCCCCCCHHHHhhcCCC
Confidence 0 001345789
Q ss_pred cEEEEecCCCCCCCHHhHHHHHHHHhhcCCCCceEEEcCCCCeeeeecCCCCCHHHHHHHHHHHHHHHHHHH
Q 026476 163 PLSILGAEIDRLSPPALVKEFEEALNAKSGVDSFVKIFPKVAHGWTVRYNVEDETAVKAAEEAHHNLLEWFA 234 (238)
Q Consensus 163 P~L~i~g~~D~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~ 234 (238)
|+|+|+|++|.++|.+.++++.+.+. +.+++.++ ++|..... ..++..+.+.+|++
T Consensus 298 PvLiI~G~~D~~v~~~~~~~l~~~~p-----~a~l~~i~-~GH~~~~e----------~p~~~~~~I~~fl~ 353 (354)
T PLN02578 298 PLLLLWGDLDPWVGPAKAEKIKAFYP-----DTTLVNLQ-AGHCPHDE----------VPEQVNKALLEWLS 353 (354)
T ss_pred CEEEEEeCCCCCCCHHHHHHHHHhCC-----CCEEEEeC-CCCCcccc----------CHHHHHHHHHHHHh
Confidence 99999999999999999888888662 34577775 79998653 33678888999985
No 56
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=99.74 E-value=4.1e-16 Score=125.81 Aligned_cols=166 Identities=17% Similarity=0.096 Sum_probs=112.4
Q ss_pred CeeEEEecCCCCCeeEEEEeccCCCCCchHHHHHHHHHHCCCEEEeccCCCCCccCCCCCcchHhhHhhcCCCcchhcHH
Q 026476 27 GLNAYVTGSPDSKLAVLLISDVYGYEAPNLRKLADKVAAAGFYVAVPDFFHGDPYVADGGKPLQEWIKDHGVDKGFEEAK 106 (238)
Q Consensus 27 ~~~~~~~~p~~~~~~vl~~hg~~g~~~~~~~~~a~~l~~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 106 (238)
|-..+...|.+.+|+|||+||.++.. ..+..++..|.+.||.|+++|+ +|++.+...... ..+ ...++.
T Consensus 6 ~~~~~~~~~~~~~p~vvliHG~~~~~-~~w~~~~~~L~~~g~~vi~~dl-~g~G~s~~~~~~------~~~---~~~~~~ 74 (273)
T PLN02211 6 GEEVTDMKPNRQPPHFVLIHGISGGS-WCWYKIRCLMENSGYKVTCIDL-KSAGIDQSDADS------VTT---FDEYNK 74 (273)
T ss_pred ccccccccccCCCCeEEEECCCCCCc-CcHHHHHHHHHhCCCEEEEecc-cCCCCCCCCccc------CCC---HHHHHH
Confidence 34445555766678999999987764 5678999999999999999999 888765321100 011 122334
Q ss_pred HHHHHHHhcC-CceEEEEEeeccHHHHHHccC-Cc-CceEEEEeccCCc-------------------------------
Q 026476 107 PVIQALKSKG-ITAIGAAGFCWGAKVVVQLGK-RE-FIQAAVLLHPSFV------------------------------- 152 (238)
Q Consensus 107 ~~~~~l~~~~-~~~i~l~G~S~GG~~a~~~a~-~~-~i~a~i~~~~~~~------------------------------- 152 (238)
.+.+++++.. .+++.++||||||.+++.++. .+ .+++.|.+.+...
T Consensus 75 ~l~~~i~~l~~~~~v~lvGhS~GG~v~~~~a~~~p~~v~~lv~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (273)
T PLN02211 75 PLIDFLSSLPENEKVILVGHSAGGLSVTQAIHRFPKKICLAVYVAATMLKLGFQTDEDMKDGVPDLSEFGDVYELGFGLG 154 (273)
T ss_pred HHHHHHHhcCCCCCEEEEEECchHHHHHHHHHhChhheeEEEEeccccCCCCCCHHHHHhccccchhhhccceeeeeccC
Confidence 4455555553 479999999999999998773 33 5666655522100
Q ss_pred ------C----------------c-------------------------cccccc-CCcEEEEecCCCCCCCHHhHHHHH
Q 026476 153 ------T----------------V-------------------------DDIKGV-EVPLSILGAEIDRLSPPALVKEFE 184 (238)
Q Consensus 153 ------~----------------~-------------------------~~~~~~-~~P~L~i~g~~D~~~p~~~~~~~~ 184 (238)
. + +...++ ++|+++|.|++|..+|++..+++.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~l~I~g~~D~~ip~~~~~~m~ 234 (273)
T PLN02211 155 PDQPPTSAIIKKEFRRKILYQMSPQEDSTLAAMLLRPGPILALRSARFEEETGDIDKVPRVYIKTLHDHVVKPEQQEAMI 234 (273)
T ss_pred CCCCCceeeeCHHHHHHHHhcCCCHHHHHHHHHhcCCcCccccccccccccccccCccceEEEEeCCCCCCCHHHHHHHH
Confidence 0 0 001123 679999999999999999989888
Q ss_pred HHHhhcCCCCceEEEcCCCCeeeee
Q 026476 185 EALNAKSGVDSFVKIFPKVAHGWTV 209 (238)
Q Consensus 185 ~~~~~~~~~~~~~~~~~g~~H~~~~ 209 (238)
+.+ .+ .+++.++ ++|.-+.
T Consensus 235 ~~~---~~--~~~~~l~-~gH~p~l 253 (273)
T PLN02211 235 KRW---PP--SQVYELE-SDHSPFF 253 (273)
T ss_pred HhC---Cc--cEEEEEC-CCCCccc
Confidence 876 23 2577787 6897655
No 57
>PRK11071 esterase YqiA; Provisional
Probab=99.73 E-value=2.1e-16 Score=120.65 Aligned_cols=151 Identities=14% Similarity=0.143 Sum_probs=105.1
Q ss_pred eeEEEEeccCCCCCchHH--HHHHHHHHC--CCEEEeccCCCCCccCCCCCcchHhhHhhcCCCcchhcHHHHHHHHHhc
Q 026476 40 LAVLLISDVYGYEAPNLR--KLADKVAAA--GFYVAVPDFFHGDPYVADGGKPLQEWIKDHGVDKGFEEAKPVIQALKSK 115 (238)
Q Consensus 40 ~~vl~~hg~~g~~~~~~~--~~a~~l~~~--G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~ 115 (238)
|+||++||+.++. ..++ .+...+.+. +|.|+++|+ +|++. ...+++.++ +.+.
T Consensus 2 p~illlHGf~ss~-~~~~~~~~~~~l~~~~~~~~v~~~dl-~g~~~------------------~~~~~l~~l---~~~~ 58 (190)
T PRK11071 2 STLLYLHGFNSSP-RSAKATLLKNWLAQHHPDIEMIVPQL-PPYPA------------------DAAELLESL---VLEH 58 (190)
T ss_pred CeEEEECCCCCCc-chHHHHHHHHHHHHhCCCCeEEeCCC-CCCHH------------------HHHHHHHHH---HHHc
Confidence 5799999988764 3344 356667663 799999999 66530 122333333 3344
Q ss_pred CCceEEEEEeeccHHHHHHccCCcCceEEEEeccCCcC----------------c---------------cccc--ccCC
Q 026476 116 GITAIGAAGFCWGAKVVVQLGKREFIQAAVLLHPSFVT----------------V---------------DDIK--GVEV 162 (238)
Q Consensus 116 ~~~~i~l~G~S~GG~~a~~~a~~~~i~a~i~~~~~~~~----------------~---------------~~~~--~~~~ 162 (238)
+.+++.++|+||||.+++.++.....+ +|++.+...+ . -+.. +..+
T Consensus 59 ~~~~~~lvG~S~Gg~~a~~~a~~~~~~-~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~i~~~~ 137 (190)
T PRK11071 59 GGDPLGLVGSSLGGYYATWLSQCFMLP-AVVVNPAVRPFELLTDYLGENENPYTGQQYVLESRHIYDLKVMQIDPLESPD 137 (190)
T ss_pred CCCCeEEEEECHHHHHHHHHHHHcCCC-EEEECCCCCHHHHHHHhcCCcccccCCCcEEEcHHHHHHHHhcCCccCCChh
Confidence 667999999999999999988433233 3555544321 0 0011 2566
Q ss_pred cEEEEecCCCCCCCHHhHHHHHHHHhhcCCCCceEEEcCCCCeeeeecCCCCCHHHHHHHHHHHHHHHHHHH
Q 026476 163 PLSILGAEIDRLSPPALVKEFEEALNAKSGVDSFVKIFPKVAHGWTVRYNVEDETAVKAAEEAHHNLLEWFA 234 (238)
Q Consensus 163 P~L~i~g~~D~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~ 234 (238)
|+++++|++|+++|.+.+.++++.. .+++++|++|.|.. .++.++.+.+||+
T Consensus 138 ~v~iihg~~De~V~~~~a~~~~~~~--------~~~~~~ggdH~f~~------------~~~~~~~i~~fl~ 189 (190)
T PRK11071 138 LIWLLQQTGDEVLDYRQAVAYYAAC--------RQTVEEGGNHAFVG------------FERYFNQIVDFLG 189 (190)
T ss_pred hEEEEEeCCCCcCCHHHHHHHHHhc--------ceEEECCCCcchhh------------HHHhHHHHHHHhc
Confidence 8899999999999999999998854 25577999999943 3688999999985
No 58
>PRK10115 protease 2; Provisional
Probab=99.73 E-value=3.6e-16 Score=140.24 Aligned_cols=172 Identities=13% Similarity=0.132 Sum_probs=126.4
Q ss_pred eeEEEe-cCC----CCCeeEEEEeccCCCC-CchHHHHHHHHHHCCCEEEeccCCCCCccCCCCCcchHhhHhh---cCC
Q 026476 28 LNAYVT-GSP----DSKLAVLLISDVYGYE-APNLRKLADKVAAAGFYVAVPDFFHGDPYVADGGKPLQEWIKD---HGV 98 (238)
Q Consensus 28 ~~~~~~-~p~----~~~~~vl~~hg~~g~~-~~~~~~~a~~l~~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~---~~~ 98 (238)
+++++. .|. ++.|.||++||+++.. ...+......|+++||+|+.++. ||.+.-.. .|... ..-
T Consensus 429 Ip~~l~~~~~~~~~~~~P~ll~~hGg~~~~~~p~f~~~~~~l~~rG~~v~~~n~-RGs~g~G~------~w~~~g~~~~k 501 (686)
T PRK10115 429 VPVSLVYHRKHFRKGHNPLLVYGYGSYGASIDADFSFSRLSLLDRGFVYAIVHV-RGGGELGQ------QWYEDGKFLKK 501 (686)
T ss_pred EEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCccHHHHHHHHCCcEEEEEEc-CCCCccCH------HHHHhhhhhcC
Confidence 776444 342 3458899999988743 24456667889999999999999 77653321 22221 112
Q ss_pred CcchhcHHHHHHHHHhc---CCceEEEEEeeccHHHHHHcc-CCc-CceEEEEeccCCc---------------------
Q 026476 99 DKGFEEAKPVIQALKSK---GITAIGAAGFCWGAKVVVQLG-KRE-FIQAAVLLHPSFV--------------------- 152 (238)
Q Consensus 99 ~~~~~d~~~~~~~l~~~---~~~~i~l~G~S~GG~~a~~~a-~~~-~i~a~i~~~~~~~--------------------- 152 (238)
....+|+.+++++|.++ +.+|+++.|.|.||.++..++ ..| .++|+|+..|...
T Consensus 502 ~~~~~D~~a~~~~Lv~~g~~d~~rl~i~G~S~GG~l~~~~~~~~Pdlf~A~v~~vp~~D~~~~~~~~~~p~~~~~~~e~G 581 (686)
T PRK10115 502 KNTFNDYLDACDALLKLGYGSPSLCYGMGGSAGGMLMGVAINQRPELFHGVIAQVPFVDVVTTMLDESIPLTTGEFEEWG 581 (686)
T ss_pred CCcHHHHHHHHHHHHHcCCCChHHeEEEEECHHHHHHHHHHhcChhheeEEEecCCchhHhhhcccCCCCCChhHHHHhC
Confidence 35678999999999887 478999999999999999866 444 7888887654321
Q ss_pred ---------------CcccccccCCc-EEEEecCCCCCCCHHhHHHHHHHHhhcCCCCceEEEc---CCCCeee
Q 026476 153 ---------------TVDDIKGVEVP-LSILGAEIDRLSPPALVKEFEEALNAKSGVDSFVKIF---PKVAHGW 207 (238)
Q Consensus 153 ---------------~~~~~~~~~~P-~L~i~g~~D~~~p~~~~~~~~~~~~~~~~~~~~~~~~---~g~~H~~ 207 (238)
+...+.+++.| +|+++|++|+-||+.++.++.++| +..+.+.++.++ ++.||+.
T Consensus 582 ~p~~~~~~~~l~~~SP~~~v~~~~~P~lLi~~g~~D~RV~~~~~~k~~a~L-r~~~~~~~~vl~~~~~~~GHg~ 654 (686)
T PRK10115 582 NPQDPQYYEYMKSYSPYDNVTAQAYPHLLVTTGLHDSQVQYWEPAKWVAKL-RELKTDDHLLLLCTDMDSGHGG 654 (686)
T ss_pred CCCCHHHHHHHHHcCchhccCccCCCceeEEecCCCCCcCchHHHHHHHHH-HhcCCCCceEEEEecCCCCCCC
Confidence 01124556778 667799999999999999999999 456767777787 8899994
No 59
>PLN00021 chlorophyllase
Probab=99.73 E-value=8.2e-16 Score=125.69 Aligned_cols=191 Identities=17% Similarity=0.223 Sum_probs=124.7
Q ss_pred CeeEEEecCC--CCCeeEEEEeccCCCCCchHHHHHHHHHHCCCEEEeccCCCCCccCCCCCcchHhhHhhcCCCcchhc
Q 026476 27 GLNAYVTGSP--DSKLAVLLISDVYGYEAPNLRKLADKVAAAGFYVAVPDFFHGDPYVADGGKPLQEWIKDHGVDKGFEE 104 (238)
Q Consensus 27 ~~~~~~~~p~--~~~~~vl~~hg~~g~~~~~~~~~a~~l~~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d 104 (238)
++++.++.|. +..|+||++||+.+.. ..+..+++.|+++||.|+++|+ ++.... .. ....++
T Consensus 38 ~~p~~v~~P~~~g~~PvVv~lHG~~~~~-~~y~~l~~~Las~G~~VvapD~-~g~~~~-~~-------------~~~i~d 101 (313)
T PLN00021 38 PKPLLVATPSEAGTYPVLLFLHGYLLYN-SFYSQLLQHIASHGFIVVAPQL-YTLAGP-DG-------------TDEIKD 101 (313)
T ss_pred CceEEEEeCCCCCCCCEEEEECCCCCCc-ccHHHHHHHHHhCCCEEEEecC-CCcCCC-Cc-------------hhhHHH
Confidence 4778888885 3458899999987764 6789999999999999999998 553211 00 012234
Q ss_pred HHHHHHHHHh-----------cCCceEEEEEeeccHHHHHHccC-Cc------CceEEEEeccCCcC-------c-----
Q 026476 105 AKPVIQALKS-----------KGITAIGAAGFCWGAKVVVQLGK-RE------FIQAAVLLHPSFVT-------V----- 154 (238)
Q Consensus 105 ~~~~~~~l~~-----------~~~~~i~l~G~S~GG~~a~~~a~-~~------~i~a~i~~~~~~~~-------~----- 154 (238)
+.++++|+++ .+.++++++|||+||.+++.++. .+ .++++|.+.+..-. +
T Consensus 102 ~~~~~~~l~~~l~~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv~g~~~~~~~~p~il~~ 181 (313)
T PLN00021 102 AAAVINWLSSGLAAVLPEGVRPDLSKLALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPVDGTSKGKQTPPPVLTY 181 (313)
T ss_pred HHHHHHHHHhhhhhhcccccccChhheEEEEECcchHHHHHHHhhccccccccceeeEEeeccccccccccCCCCccccc
Confidence 5555555543 13478999999999999999883 32 57888887764211 0
Q ss_pred -ccccccCCcEEEEecCCCC-----CCC----HH-hHHHHHHHHhhcCCCCceEEEcCCCCeeeeecCC-CC--------
Q 026476 155 -DDIKGVEVPLSILGAEIDR-----LSP----PA-LVKEFEEALNAKSGVDSFVKIFPKVAHGWTVRYN-VE-------- 214 (238)
Q Consensus 155 -~~~~~~~~P~L~i~g~~D~-----~~p----~~-~~~~~~~~~~~~~~~~~~~~~~~g~~H~~~~~~~-~~-------- 214 (238)
....++..|+|++.+..|. .+| .. .-.+++++++ .+..+.+.++++|.-..+.. ..
T Consensus 182 ~~~s~~~~~P~liig~g~~~~~~~~~~p~~ap~~~~~~~f~~~~~----~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~ 257 (313)
T PLN00021 182 APHSFNLDIPVLVIGTGLGGEPRNPLFPPCAPDGVNHAEFFNECK----APAVHFVAKDYGHMDMLDDDTSGIRGKITGC 257 (313)
T ss_pred CcccccCCCCeEEEecCCCcccccccccccCCCCCCHHHHHHhcC----CCeeeeeecCCCcceeecCCCcccccccccc
Confidence 0223477999999998763 222 43 3366777662 25667777888885442222 00
Q ss_pred ---C-HHHHHHHHHHHHHHHHHHHHhc
Q 026476 215 ---D-ETAVKAAEEAHHNLLEWFAKYV 237 (238)
Q Consensus 215 ---~-~~~~~~~~~~~~~~~~fl~~~~ 237 (238)
. .......+...-.++.||++++
T Consensus 258 ~c~~g~~~~~~r~~~~g~~~aFl~~~l 284 (313)
T PLN00021 258 MCKNGKPRKPMRRFVGGAVVAFLKAYL 284 (313)
T ss_pred ccCCCCchHHHHHHHHHHHHHHHHHHh
Confidence 1 1122345556678999999876
No 60
>PLN02872 triacylglycerol lipase
Probab=99.73 E-value=6.4e-17 Score=136.02 Aligned_cols=185 Identities=18% Similarity=0.156 Sum_probs=122.8
Q ss_pred CeeEEEEeccCCCCCch-----HHHHHHHHHHCCCEEEeccCCCCCccCCCC----CcchHhhHhhcCCCcc-hhcHHHH
Q 026476 39 KLAVLLISDVYGYEAPN-----LRKLADKVAAAGFYVAVPDFFHGDPYVADG----GKPLQEWIKDHGVDKG-FEEAKPV 108 (238)
Q Consensus 39 ~~~vl~~hg~~g~~~~~-----~~~~a~~l~~~G~~v~~~d~~~g~~~~~~~----~~~~~~~~~~~~~~~~-~~d~~~~ 108 (238)
+|+|+++||..++...+ ...++..|+++||.|+++|. ||.+++.+. .....-| .....+. ..|+.++
T Consensus 74 ~~~Vll~HGl~~ss~~w~~~~~~~sla~~La~~GydV~l~n~-RG~~~s~gh~~~~~~~~~fw--~~s~~e~a~~Dl~a~ 150 (395)
T PLN02872 74 GPPVLLQHGLFMAGDAWFLNSPEQSLGFILADHGFDVWVGNV-RGTRWSYGHVTLSEKDKEFW--DWSWQELALYDLAEM 150 (395)
T ss_pred CCeEEEeCcccccccceeecCcccchHHHHHhCCCCcccccc-cccccccCCCCCCccchhcc--CCcHHHHHHHHHHHH
Confidence 57899999976543221 24688889999999999999 887654321 0110011 1222223 3799999
Q ss_pred HHHHHhcCCceEEEEEeeccHHHHHHccCCc----CceEEEEeccCCc--------------------------------
Q 026476 109 IQALKSKGITAIGAAGFCWGAKVVVQLGKRE----FIQAAVLLHPSFV-------------------------------- 152 (238)
Q Consensus 109 ~~~l~~~~~~~i~l~G~S~GG~~a~~~a~~~----~i~a~i~~~~~~~-------------------------------- 152 (238)
++++.+....++.++||||||.+++.++.+| .+++++++.|...
T Consensus 151 id~i~~~~~~~v~~VGhS~Gg~~~~~~~~~p~~~~~v~~~~~l~P~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 230 (395)
T PLN02872 151 IHYVYSITNSKIFIVGHSQGTIMSLAALTQPNVVEMVEAAALLCPISYLDHVTAPLVLRMVFMHLDQMVVAMGIHQLNFR 230 (395)
T ss_pred HHHHHhccCCceEEEEECHHHHHHHHHhhChHHHHHHHHHHHhcchhhhccCCCHHHHHHHHHhHHHHHHHhcCceecCC
Confidence 9999776557999999999999988554332 1222221111000
Q ss_pred --------------------------------------------------------------------------------
Q 026476 153 -------------------------------------------------------------------------------- 152 (238)
Q Consensus 153 -------------------------------------------------------------------------------- 152 (238)
T Consensus 231 ~~~~~~~~~~~C~~~~~c~~~~~~~~g~~~~~n~~~~~~~~~~~pagtS~k~~~H~~Q~~~s~~f~~yDyg~~~n~~~Yg 310 (395)
T PLN02872 231 SDVLVKLLDSICEGHMDCNDLLTSITGTNCCFNASRIDYYLEYEPHPSSVKNLRHLFQMIRKGTFAHYDYGIFKNLKLYG 310 (395)
T ss_pred cHHHHHHHHHHccCchhHHHHHHHHhCCCcccchhhhhHHHhcCCCcchHHHHHHHHHHHhcCCcccCCCCchhhHHHhC
Confidence
Q ss_pred ----Cccccccc--CCcEEEEecCCCCCCCHHhHHHHHHHHhhcCCCCceEEEcCCCCeeeeecCCCCCHHHHHHHHHHH
Q 026476 153 ----TVDDIKGV--EVPLSILGAEIDRLSPPALVKEFEEALNAKSGVDSFVKIFPKVAHGWTVRYNVEDETAVKAAEEAH 226 (238)
Q Consensus 153 ----~~~~~~~~--~~P~L~i~g~~D~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~ 226 (238)
+.-++.++ ++|+++++|++|.+++++.++++.+.+. . ..+++.+++.+|..+.-.. +..++++
T Consensus 311 ~~~pP~Y~l~~i~~~~Pv~i~~G~~D~lv~~~dv~~l~~~Lp---~-~~~l~~l~~~gH~dfi~~~-------eape~V~ 379 (395)
T PLN02872 311 QVNPPAFDLSLIPKSLPLWMGYGGTDGLADVTDVEHTLAELP---S-KPELLYLENYGHIDFLLST-------SAKEDVY 379 (395)
T ss_pred CCCCCCcCcccCCCCccEEEEEcCCCCCCCHHHHHHHHHHCC---C-ccEEEEcCCCCCHHHHhCc-------chHHHHH
Confidence 00015566 5799999999999999999999988873 1 2468889999997322111 1457899
Q ss_pred HHHHHHHHHhc
Q 026476 227 HNLLEWFAKYV 237 (238)
Q Consensus 227 ~~~~~fl~~~~ 237 (238)
+.+++||+++.
T Consensus 380 ~~Il~fL~~~~ 390 (395)
T PLN02872 380 NHMIQFFRSLG 390 (395)
T ss_pred HHHHHHHHHhh
Confidence 99999999764
No 61
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.73 E-value=6.2e-17 Score=125.43 Aligned_cols=152 Identities=20% Similarity=0.312 Sum_probs=111.4
Q ss_pred EEEEeccCCCCCchHHHHHHHHHHCCCEEEeccCCCCCccCCCCCcchHhhHhhcCCCcchhcHHHHHHHHHhcCCceEE
Q 026476 42 VLLISDVYGYEAPNLRKLADKVAAAGFYVAVPDFFHGDPYVADGGKPLQEWIKDHGVDKGFEEAKPVIQALKSKGITAIG 121 (238)
Q Consensus 42 vl~~hg~~g~~~~~~~~~a~~l~~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~i~ 121 (238)
||++||+.+.. ..+..+++.|+ +||.|+++|+ +|+|.+..... ..... ..+.+..+.+++++.+.+++.
T Consensus 1 vv~~hG~~~~~-~~~~~~~~~l~-~~~~v~~~d~-~G~G~s~~~~~-----~~~~~---~~~~~~~l~~~l~~~~~~~~~ 69 (228)
T PF12697_consen 1 VVFLHGFGGSS-ESWDPLAEALA-RGYRVIAFDL-PGHGRSDPPPD-----YSPYS---IEDYAEDLAELLDALGIKKVI 69 (228)
T ss_dssp EEEE-STTTTG-GGGHHHHHHHH-TTSEEEEEEC-TTSTTSSSHSS-----GSGGS---HHHHHHHHHHHHHHTTTSSEE
T ss_pred eEEECCCCCCH-HHHHHHHHHHh-CCCEEEEEec-CCccccccccc-----cCCcc---hhhhhhhhhhccccccccccc
Confidence 78999988774 67889999994 7999999999 89887654210 00112 222334444455555667999
Q ss_pred EEEeeccHHHHHHcc-CCc-CceEEEEeccCCc-------C---------------------------------------
Q 026476 122 AAGFCWGAKVVVQLG-KRE-FIQAAVLLHPSFV-------T--------------------------------------- 153 (238)
Q Consensus 122 l~G~S~GG~~a~~~a-~~~-~i~a~i~~~~~~~-------~--------------------------------------- 153 (238)
++|||+||.+++.++ ..| .++++|++.+... .
T Consensus 70 lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (228)
T PF12697_consen 70 LVGHSMGGMIALRLAARYPDRVKGLVLLSPPPPLPDSPSRSFGPSFIRRLLAWRSRSLRRLASRFFYRWFDGDEPEDLIR 149 (228)
T ss_dssp EEEETHHHHHHHHHHHHSGGGEEEEEEESESSSHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHH
T ss_pred ccccccccccccccccccccccccceeecccccccccccccccchhhhhhhhcccccccccccccccccccccccccccc
Confidence 999999999999988 444 7999998876552 0
Q ss_pred -------------------cccccccCCcEEEEecCCCCCCCHHhHHHHHHHHhhcCCCCceEEEcCCCCeeeee
Q 026476 154 -------------------VDDIKGVEVPLSILGAEIDRLSPPALVKEFEEALNAKSGVDSFVKIFPKVAHGWTV 209 (238)
Q Consensus 154 -------------------~~~~~~~~~P~L~i~g~~D~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~H~~~~ 209 (238)
...+.++++|+++++|++|.+++.+..+.+.+.+. +++++++++++|....
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~pvl~i~g~~D~~~~~~~~~~~~~~~~-----~~~~~~~~~~gH~~~~ 219 (228)
T PF12697_consen 150 SSRRALAEYLRSNLWQADLSEALPRIKVPVLVIHGEDDPIVPPESAEELADKLP-----NAELVVIPGAGHFLFL 219 (228)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHGSSSEEEEEEETTSSSSHHHHHHHHHHHST-----TEEEEEETTSSSTHHH
T ss_pred ccccccccccccccccccccccccccCCCeEEeecCCCCCCCHHHHHHHHHHCC-----CCEEEEECCCCCccHH
Confidence 00145678999999999999999888888777652 5789999999999754
No 62
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.72 E-value=2e-16 Score=123.09 Aligned_cols=153 Identities=14% Similarity=0.154 Sum_probs=102.6
Q ss_pred EEecCC---CCCeeEEEEeccCCCCCchHH---HHHHHHHHCCCEEEeccCCCCCccCCCCCcchHhhHhh---cCCCcc
Q 026476 31 YVTGSP---DSKLAVLLISDVYGYEAPNLR---KLADKVAAAGFYVAVPDFFHGDPYVADGGKPLQEWIKD---HGVDKG 101 (238)
Q Consensus 31 ~~~~p~---~~~~~vl~~hg~~g~~~~~~~---~~a~~l~~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~---~~~~~~ 101 (238)
|++.|+ ++.|.||++||..+.. ..+. .+...+.+.||.|++||+ +|.+..... ..|... ......
T Consensus 2 ~ly~P~~~~~~~P~vv~lHG~~~~~-~~~~~~~~~~~~a~~~g~~Vv~Pd~-~g~~~~~~~----~~~~~~~~~~~~~~~ 75 (212)
T TIGR01840 2 YVYVPAGLTGPRALVLALHGCGQTA-SAYVIDWGWKAAADRYGFVLVAPEQ-TSYNSSNNC----WDWFFTHHRARGTGE 75 (212)
T ss_pred EEEcCCCCCCCCCEEEEeCCCCCCH-HHHhhhcChHHHHHhCCeEEEecCC-cCccccCCC----CCCCCccccCCCCcc
Confidence 455564 3458899999977653 3332 355656667999999999 776432111 011111 111234
Q ss_pred hhcHHHHHHHHHhc---CCceEEEEEeeccHHHHHHcc-CCc-CceEEEEeccCCcCcc---------------------
Q 026476 102 FEEAKPVIQALKSK---GITAIGAAGFCWGAKVVVQLG-KRE-FIQAAVLLHPSFVTVD--------------------- 155 (238)
Q Consensus 102 ~~d~~~~~~~l~~~---~~~~i~l~G~S~GG~~a~~~a-~~~-~i~a~i~~~~~~~~~~--------------------- 155 (238)
..++..+++.+++. +.++|.++|||+||.+++.++ .++ .+.+++.+.+......
T Consensus 76 ~~~~~~~i~~~~~~~~id~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (212)
T TIGR01840 76 VESLHQLIDAVKANYSIDPNRVYVTGLSAGGGMTAVLGCTYPDVFAGGASNAGLPYGEASSSISATPQMCTAATAASVCR 155 (212)
T ss_pred HHHHHHHHHHHHHhcCcChhheEEEEECHHHHHHHHHHHhCchhheEEEeecCCcccccccchhhHhhcCCCCCHHHHHH
Confidence 56778888888765 457999999999999999987 455 4777777776542110
Q ss_pred -------cccccCCcEEEEecCCCCCCCHHhHHHHHHHHhh
Q 026476 156 -------DIKGVEVPLSILGAEIDRLSPPALVKEFEEALNA 189 (238)
Q Consensus 156 -------~~~~~~~P~L~i~g~~D~~~p~~~~~~~~~~~~~ 189 (238)
.......|++++||++|.+||++.++.+.+.+++
T Consensus 156 ~~~~~~~~~~~~~p~~~i~hG~~D~vVp~~~~~~~~~~l~~ 196 (212)
T TIGR01840 156 LVRGMQSEYNGPTPIMSVVHGDADYTVLPGNADEIRDAMLK 196 (212)
T ss_pred HHhccCCcccCCCCeEEEEEcCCCceeCcchHHHHHHHHHH
Confidence 0112344578999999999999999999999954
No 63
>PRK07581 hypothetical protein; Validated
Probab=99.72 E-value=1e-16 Score=133.28 Aligned_cols=183 Identities=10% Similarity=0.131 Sum_probs=114.4
Q ss_pred CeeEEEEeccCCCCCchHHHHH---HHHHHCCCEEEeccCCCCCccCCCCCcchHhh-HhhcCCCcchhcHHHHHHHHH-
Q 026476 39 KLAVLLISDVYGYEAPNLRKLA---DKVAAAGFYVAVPDFFHGDPYVADGGKPLQEW-IKDHGVDKGFEEAKPVIQALK- 113 (238)
Q Consensus 39 ~~~vl~~hg~~g~~~~~~~~~a---~~l~~~G~~v~~~d~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~d~~~~~~~l~- 113 (238)
.+++|++||+++.....+..+. ..|...+|.|+++|+ +|+|.+.........+ +..+......+|+.+....+.
T Consensus 40 ~~~~vll~~~~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~-~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 118 (339)
T PRK07581 40 KDNAILYPTWYSGTHQDNEWLIGPGRALDPEKYFIIIPNM-FGNGLSSSPSNTPAPFNAARFPHVTIYDNVRAQHRLLTE 118 (339)
T ss_pred CCCEEEEeCCCCCCcccchhhccCCCccCcCceEEEEecC-CCCCCCCCCCCCCCCCCCCCCCceeHHHHHHHHHHHHHH
Confidence 3455555666553323333322 356667899999999 9998764321100000 001111123456665444443
Q ss_pred hcCCceE-EEEEeeccHHHHHHcc-CCc-CceEEEEeccCCc--------------------------------------
Q 026476 114 SKGITAI-GAAGFCWGAKVVVQLG-KRE-FIQAAVLLHPSFV-------------------------------------- 152 (238)
Q Consensus 114 ~~~~~~i-~l~G~S~GG~~a~~~a-~~~-~i~a~i~~~~~~~-------------------------------------- 152 (238)
+++.+++ .++||||||.+++.++ ++| .+++.|++.+...
T Consensus 119 ~lgi~~~~~lvG~S~GG~va~~~a~~~P~~V~~Lvli~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 198 (339)
T PRK07581 119 KFGIERLALVVGWSMGAQQTYHWAVRYPDMVERAAPIAGTAKTTPHNFVFLEGLKAALTADPAFNGGWYAEPPERGLRAH 198 (339)
T ss_pred HhCCCceEEEEEeCHHHHHHHHHHHHCHHHHhhheeeecCCCCCHHHHHHHHHHHHHHHhCCCCCCCCCCCcHHHHHHHH
Confidence 4578884 7999999999999988 444 4555554411000
Q ss_pred ------------------------------------------C--------------------------cccccccCCcE
Q 026476 153 ------------------------------------------T--------------------------VDDIKGVEVPL 164 (238)
Q Consensus 153 ------------------------------------------~--------------------------~~~~~~~~~P~ 164 (238)
. ...+.++++|+
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~L~~I~~Pt 278 (339)
T PRK07581 199 ARVYAGWGFSQAFYRQELWRAMGYASLEDFLVGFWEGNFLPRDPNNLLAMLWTWQRGDISRNPAYGGDLAAALGSITAKT 278 (339)
T ss_pred HHHHHHHHhHHHHHHhhhccccChhhHHHHHHHHHHHhhcccCcccHHHHHHHhhhcccccCcccCCCHHHHHhcCCCCE
Confidence 0 00123478999
Q ss_pred EEEecCCCCCCCHHhHHHHHHHHhhcCCCCceEEEcCC-CCeeeeecCCCCCHHHHHHHHHHHHHHHHHHHHhc
Q 026476 165 SILGAEIDRLSPPALVKEFEEALNAKSGVDSFVKIFPK-VAHGWTVRYNVEDETAVKAAEEAHHNLLEWFAKYV 237 (238)
Q Consensus 165 L~i~g~~D~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g-~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~ 237 (238)
|+|+|++|.++|++..+.+.+.+. +.+++++++ ++|....... ++....+.+||++.+
T Consensus 279 LvI~G~~D~~~p~~~~~~l~~~ip-----~a~l~~i~~~~GH~~~~~~~----------~~~~~~~~~~~~~~~ 337 (339)
T PRK07581 279 FVMPISTDLYFPPEDCEAEAALIP-----NAELRPIESIWGHLAGFGQN----------PADIAFIDAALKELL 337 (339)
T ss_pred EEEEeCCCCCCCHHHHHHHHHhCC-----CCeEEEeCCCCCccccccCc----------HHHHHHHHHHHHHHH
Confidence 999999999999999888877662 356889998 8997765332 467778888888764
No 64
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=99.72 E-value=2e-16 Score=131.06 Aligned_cols=181 Identities=19% Similarity=0.261 Sum_probs=113.9
Q ss_pred CeeEEEecCCCCC--eeEEEEeccCCCCCchHHHHHHHHHHCCCEEEeccCCCCCccCCCCCcchHhhHhhcCCCcchhc
Q 026476 27 GLNAYVTGSPDSK--LAVLLISDVYGYEAPNLRKLADKVAAAGFYVAVPDFFHGDPYVADGGKPLQEWIKDHGVDKGFEE 104 (238)
Q Consensus 27 ~~~~~~~~p~~~~--~~vl~~hg~~g~~~~~~~~~a~~l~~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d 104 (238)
.+++|+..|.+.. |+||++-|.-+...+.+..+.++|+.+|++++++|. +|.|.+... .-+.+.+ .-
T Consensus 176 ~I~g~LhlP~~~~p~P~VIv~gGlDs~qeD~~~l~~~~l~~rGiA~LtvDm-PG~G~s~~~-------~l~~D~~---~l 244 (411)
T PF06500_consen 176 TIPGYLHLPSGEKPYPTVIVCGGLDSLQEDLYRLFRDYLAPRGIAMLTVDM-PGQGESPKW-------PLTQDSS---RL 244 (411)
T ss_dssp EEEEEEEESSSSS-EEEEEEE--TTS-GGGGHHHHHCCCHHCT-EEEEE---TTSGGGTTT--------S-S-CC---HH
T ss_pred EEEEEEEcCCCCCCCCEEEEeCCcchhHHHHHHHHHHHHHhCCCEEEEEcc-CCCcccccC-------CCCcCHH---HH
Confidence 3899998887433 444544444455434444556789999999999999 898876421 1111112 23
Q ss_pred HHHHHHHHHhc---CCceEEEEEeeccHHHHHHcc--CCcCceEEEEeccCCcC--------------------------
Q 026476 105 AKPVIQALKSK---GITAIGAAGFCWGAKVVVQLG--KREFIQAAVLLHPSFVT-------------------------- 153 (238)
Q Consensus 105 ~~~~~~~l~~~---~~~~i~l~G~S~GG~~a~~~a--~~~~i~a~i~~~~~~~~-------------------------- 153 (238)
..++++++.++ |..||+++|+|+||++|..+| ..++++++|++.+..-.
T Consensus 245 ~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le~~RlkavV~~Ga~vh~~ft~~~~~~~~P~my~d~LA~rlG~~ 324 (411)
T PF06500_consen 245 HQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALEDPRLKAVVALGAPVHHFFTDPEWQQRVPDMYLDVLASRLGMA 324 (411)
T ss_dssp HHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHTTTT-SEEEEES---SCGGH-HHHHTTS-HHHHHHHHHHCT-S
T ss_pred HHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHhcccceeeEeeeCchHhhhhccHHHHhcCCHHHHHHHHHHhCCc
Confidence 45677888776 578999999999999999987 45799999998765221
Q ss_pred ------------------cccc--cccCCcEEEEecCCCCCCCHHhHHHHHHHHhhcCCCCceEEEcCCCC-eeeeecCC
Q 026476 154 ------------------VDDI--KGVEVPLSILGAEIDRLSPPALVKEFEEALNAKSGVDSFVKIFPKVA-HGWTVRYN 212 (238)
Q Consensus 154 ------------------~~~~--~~~~~P~L~i~g~~D~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~-H~~~~~~~ 212 (238)
...+ .+..+|+|.+.+++|+++|.++.+.+... +. +-+...++... |.
T Consensus 325 ~~~~~~l~~el~~~SLk~qGlL~~rr~~~plL~i~~~~D~v~P~eD~~lia~~--s~---~gk~~~~~~~~~~~------ 393 (411)
T PF06500_consen 325 AVSDESLRGELNKFSLKTQGLLSGRRCPTPLLAINGEDDPVSPIEDSRLIAES--ST---DGKALRIPSKPLHM------ 393 (411)
T ss_dssp CE-HHHHHHHGGGGSTTTTTTTTSS-BSS-EEEEEETT-SSS-HHHHHHHHHT--BT---T-EEEEE-SSSHHH------
T ss_pred cCCHHHHHHHHHhcCcchhccccCCCCCcceEEeecCCCCCCCHHHHHHHHhc--CC---CCceeecCCCcccc------
Confidence 0013 55678999999999999999998876653 22 33455555322 32
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHhc
Q 026476 213 VEDETAVKAAEEAHHNLLEWFAKYV 237 (238)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~fl~~~~ 237 (238)
..+++...+.+||++.|
T Consensus 394 --------gy~~al~~~~~Wl~~~l 410 (411)
T PF06500_consen 394 --------GYPQALDEIYKWLEDKL 410 (411)
T ss_dssp --------HHHHHHHHHHHHHHHHH
T ss_pred --------chHHHHHHHHHHHHHhc
Confidence 34689999999999875
No 65
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=99.72 E-value=5.2e-17 Score=135.27 Aligned_cols=184 Identities=17% Similarity=0.197 Sum_probs=119.5
Q ss_pred CCeeEEEecCCCCCeeEEEEeccCCCCCc-----------hHHHHHH---HHHHCCCEEEeccCCCCCccCCCCCcchHh
Q 026476 26 GGLNAYVTGSPDSKLAVLLISDVYGYEAP-----------NLRKLAD---KVAAAGFYVAVPDFFHGDPYVADGGKPLQE 91 (238)
Q Consensus 26 ~~~~~~~~~p~~~~~~vl~~hg~~g~~~~-----------~~~~~a~---~l~~~G~~v~~~d~~~g~~~~~~~~~~~~~ 91 (238)
+++..++..-...++++||+||+++.... ++..+.. .|...+|.|+++|+ +|++.+...
T Consensus 44 ~~~~l~y~~~G~~~~p~vll~g~~~~~~~~~~~~~~~~~~~w~~~v~~~~~L~~~~~~Vi~~Dl-~G~g~s~~~------ 116 (343)
T PRK08775 44 EDLRLRYELIGPAGAPVVFVAGGISAHRHVAATATFPEKGWWEGLVGSGRALDPARFRLLAFDF-IGADGSLDV------ 116 (343)
T ss_pred CCceEEEEEeccCCCCEEEEecCCCcccccccccCCCCCCcchhccCCCCccCccccEEEEEeC-CCCCCCCCC------
Confidence 44555554322224468888887776432 4555664 46455799999999 888755321
Q ss_pred hHhhcCCCcchhcHHHHHHHHHhcCCce-EEEEEeeccHHHHHHcc-CCc-CceEEEEeccCC-----------------
Q 026476 92 WIKDHGVDKGFEEAKPVIQALKSKGITA-IGAAGFCWGAKVVVQLG-KRE-FIQAAVLLHPSF----------------- 151 (238)
Q Consensus 92 ~~~~~~~~~~~~d~~~~~~~l~~~~~~~-i~l~G~S~GG~~a~~~a-~~~-~i~a~i~~~~~~----------------- 151 (238)
........+|+.++ +.+.+.++ +.++||||||.+++.++ +.| .+++.|++.+..
T Consensus 117 ---~~~~~~~a~dl~~l---l~~l~l~~~~~lvG~SmGG~vA~~~A~~~P~~V~~LvLi~s~~~~~~~~~~~~~~~~~~~ 190 (343)
T PRK08775 117 ---PIDTADQADAIALL---LDALGIARLHAFVGYSYGALVGLQFASRHPARVRTLVVVSGAHRAHPYAAAWRALQRRAV 190 (343)
T ss_pred ---CCCHHHHHHHHHHH---HHHcCCCcceEEEEECHHHHHHHHHHHHChHhhheEEEECccccCCHHHHHHHHHHHHHH
Confidence 11112234444444 44446656 47999999999999987 444 555555543210
Q ss_pred -----------------------c------------C------------------------------------------c
Q 026476 152 -----------------------V------------T------------------------------------------V 154 (238)
Q Consensus 152 -----------------------~------------~------------------------------------------~ 154 (238)
. . .
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (343)
T PRK08775 191 ALGQLQCAEKHGLALARQLAMLSYRTPEEFEERFDAPPEVINGRVRVAAEDYLDAAGAQYVARTPVNAYLRLSESIDLHR 270 (343)
T ss_pred HcCCCCCCchhHHHHHHHHHHHHcCCHHHHHHHhCCCccccCCCccchHHHHHHHHHHHHHHhcChhHHHHHHHHHhhcC
Confidence 0 0 0
Q ss_pred ccccccCCcEEEEecCCCCCCCHHhHHHHHHHHhhcCCCCceEEEcCC-CCeeeeecCCCCCHHHHHHHHHHHHHHHHHH
Q 026476 155 DDIKGVEVPLSILGAEIDRLSPPALVKEFEEALNAKSGVDSFVKIFPK-VAHGWTVRYNVEDETAVKAAEEAHHNLLEWF 233 (238)
Q Consensus 155 ~~~~~~~~P~L~i~g~~D~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g-~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl 233 (238)
..+.++++|+|+++|++|.++|++....+.+.+. + +.+++++++ ++|..... ..++..+.+.+||
T Consensus 271 ~~l~~I~~PtLvi~G~~D~~~p~~~~~~~~~~i~--p--~a~l~~i~~~aGH~~~lE----------~Pe~~~~~l~~FL 336 (343)
T PRK08775 271 VDPEAIRVPTVVVAVEGDRLVPLADLVELAEGLG--P--RGSLRVLRSPYGHDAFLK----------ETDRIDAILTTAL 336 (343)
T ss_pred CChhcCCCCeEEEEeCCCEeeCHHHHHHHHHHcC--C--CCeEEEEeCCccHHHHhc----------CHHHHHHHHHHHH
Confidence 0134578899999999999999998888887662 1 456889984 89988764 2367888889999
Q ss_pred HHh
Q 026476 234 AKY 236 (238)
Q Consensus 234 ~~~ 236 (238)
++.
T Consensus 337 ~~~ 339 (343)
T PRK08775 337 RST 339 (343)
T ss_pred Hhc
Confidence 864
No 66
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=99.71 E-value=5.9e-16 Score=129.92 Aligned_cols=186 Identities=15% Similarity=0.146 Sum_probs=125.1
Q ss_pred eeCCeeEEEecC-CCCCeeEEEEeccCCCCCchHHHHHHHHHHCCCEEEeccCCCCCccCCCCCcchHhhHhhcCCCcch
Q 026476 24 KLGGLNAYVTGS-PDSKLAVLLISDVYGYEAPNLRKLADKVAAAGFYVAVPDFFHGDPYVADGGKPLQEWIKDHGVDKGF 102 (238)
Q Consensus 24 ~~~~~~~~~~~p-~~~~~~vl~~hg~~g~~~~~~~~~a~~l~~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 102 (238)
..+++...+..- ....++|||+||+.+.. ..++.++..|++ +|.|+++|+ +|+|.+...... ....++.+...
T Consensus 111 ~~~~~~~~y~~~G~~~~~~ivllHG~~~~~-~~w~~~~~~L~~-~~~Via~Dl-pG~G~S~~p~~~---~~~~ys~~~~a 184 (383)
T PLN03084 111 SSDLFRWFCVESGSNNNPPVLLIHGFPSQA-YSYRKVLPVLSK-NYHAIAFDW-LGFGFSDKPQPG---YGFNYTLDEYV 184 (383)
T ss_pred cCCceEEEEEecCCCCCCeEEEECCCCCCH-HHHHHHHHHHhc-CCEEEEECC-CCCCCCCCCccc---ccccCCHHHHH
Confidence 334444443321 12357899999987653 567888988875 799999999 899876542110 00012233344
Q ss_pred hcHHHHHHHHHhcCCceEEEEEeeccHHHHHHcc-CCc-CceEEEEeccCCcC---------------------------
Q 026476 103 EEAKPVIQALKSKGITAIGAAGFCWGAKVVVQLG-KRE-FIQAAVLLHPSFVT--------------------------- 153 (238)
Q Consensus 103 ~d~~~~~~~l~~~~~~~i~l~G~S~GG~~a~~~a-~~~-~i~a~i~~~~~~~~--------------------------- 153 (238)
+++.++++.+ +.+++.++|||+||.+++.++ ..| .++++|++.+....
T Consensus 185 ~~l~~~i~~l---~~~~~~LvG~s~GG~ia~~~a~~~P~~v~~lILi~~~~~~~~~~~p~~l~~~~~~l~~~~~~~~~~~ 261 (383)
T PLN03084 185 SSLESLIDEL---KSDKVSLVVQGYFSPPVVKYASAHPDKIKKLILLNPPLTKEHAKLPSTLSEFSNFLLGEIFSQDPLR 261 (383)
T ss_pred HHHHHHHHHh---CCCCceEEEECHHHHHHHHHHHhChHhhcEEEEECCCCccccccchHHHHHHHHHHhhhhhhcchHH
Confidence 5555555544 567899999999999999987 333 57777666533100
Q ss_pred ----------c---------------------------------cc-------c------cccCCcEEEEecCCCCCCCH
Q 026476 154 ----------V---------------------------------DD-------I------KGVEVPLSILGAEIDRLSPP 177 (238)
Q Consensus 154 ----------~---------------------------------~~-------~------~~~~~P~L~i~g~~D~~~p~ 177 (238)
. .. + .++++|+|+++|+.|.+++.
T Consensus 262 ~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~l~~~~r~~~~~l~~~~~~l~~~l~~~~i~vPvLiI~G~~D~~v~~ 341 (383)
T PLN03084 262 ASDKALTSCGPYAMKEDDAMVYRRPYLTSGSSGFALNAISRSMKKELKKYIEEMRSILTDKNWKTPITVCWGLRDRWLNY 341 (383)
T ss_pred HHhhhhcccCccCCCHHHHHHHhccccCCcchHHHHHHHHHHhhcccchhhHHHHhhhccccCCCCEEEEeeCCCCCcCH
Confidence 0 00 0 13588999999999999999
Q ss_pred HhHHHHHHHHhhcCCCCceEEEcCCCCeeeeecCCCCCHHHHHHHHHHHHHHHHHHH
Q 026476 178 ALVKEFEEALNAKSGVDSFVKIFPKVAHGWTVRYNVEDETAVKAAEEAHHNLLEWFA 234 (238)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~ 234 (238)
+..+++.+.. +.+++++++++|....+ ..++..+.+.+||.
T Consensus 342 ~~~~~~a~~~------~a~l~vIp~aGH~~~~E----------~Pe~v~~~I~~Fl~ 382 (383)
T PLN03084 342 DGVEDFCKSS------QHKLIELPMAGHHVQED----------CGEELGGIISGILS 382 (383)
T ss_pred HHHHHHHHhc------CCeEEEECCCCCCcchh----------CHHHHHHHHHHHhh
Confidence 8877766642 45788999999988663 34678888888886
No 67
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.71 E-value=1.8e-15 Score=128.28 Aligned_cols=103 Identities=14% Similarity=0.105 Sum_probs=66.9
Q ss_pred CCCCeeEEEEeccCCCCCchHHHHHHHHHHCCCEEEeccCCCCCccCCCCCcchHhhHhhcCCCcchhc-HHHHHHHHHh
Q 026476 36 PDSKLAVLLISDVYGYEAPNLRKLADKVAAAGFYVAVPDFFHGDPYVADGGKPLQEWIKDHGVDKGFEE-AKPVIQALKS 114 (238)
Q Consensus 36 ~~~~~~vl~~hg~~g~~~~~~~~~a~~l~~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d-~~~~~~~l~~ 114 (238)
+...|+||++||+.+.. ..+...++.|++ +|.|+++|+ +|+|.+....... .......+. +..+.++++.
T Consensus 102 ~~~~p~vvllHG~~~~~-~~~~~~~~~L~~-~~~vi~~D~-rG~G~S~~~~~~~------~~~~~~~~~~~~~i~~~~~~ 172 (402)
T PLN02894 102 KEDAPTLVMVHGYGASQ-GFFFRNFDALAS-RFRVIAIDQ-LGWGGSSRPDFTC------KSTEETEAWFIDSFEEWRKA 172 (402)
T ss_pred CCCCCEEEEECCCCcch-hHHHHHHHHHHh-CCEEEEECC-CCCCCCCCCCccc------ccHHHHHHHHHHHHHHHHHH
Confidence 34568999999986653 456677788876 599999999 9998764321000 000111111 2233345555
Q ss_pred cCCceEEEEEeeccHHHHHHcc-CCc-CceEEEEe
Q 026476 115 KGITAIGAAGFCWGAKVVVQLG-KRE-FIQAAVLL 147 (238)
Q Consensus 115 ~~~~~i~l~G~S~GG~~a~~~a-~~~-~i~a~i~~ 147 (238)
.+.+++.++||||||.+++.++ ..+ .++++|++
T Consensus 173 l~~~~~~lvGhS~GG~la~~~a~~~p~~v~~lvl~ 207 (402)
T PLN02894 173 KNLSNFILLGHSFGGYVAAKYALKHPEHVQHLILV 207 (402)
T ss_pred cCCCCeEEEEECHHHHHHHHHHHhCchhhcEEEEE
Confidence 5777999999999999999987 433 56665554
No 68
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.70 E-value=2.1e-16 Score=122.04 Aligned_cols=175 Identities=19% Similarity=0.202 Sum_probs=128.7
Q ss_pred eeEEEecCCC---CCeeEEEEeccCCCCCchHHHHHHHHHHCCCEEEeccCCCCCccCCCC-----Cc-chHhhHhhc--
Q 026476 28 LNAYVTGSPD---SKLAVLLISDVYGYEAPNLRKLADKVAAAGFYVAVPDFFHGDPYVADG-----GK-PLQEWIKDH-- 96 (238)
Q Consensus 28 ~~~~~~~p~~---~~~~vl~~hg~~g~~~~~~~~~a~~l~~~G~~v~~~d~~~g~~~~~~~-----~~-~~~~~~~~~-- 96 (238)
+.+|+..|.. +.|+||.+||..|.. ..+..+ -.++..||+|+.+|. ||++.+..+ .. +...++.+.
T Consensus 69 I~gwlvlP~~~~~~~P~vV~fhGY~g~~-g~~~~~-l~wa~~Gyavf~Mdv-RGQg~~~~dt~~~p~~~s~pG~mtrGil 145 (321)
T COG3458 69 IKGWLVLPRHEKGKLPAVVQFHGYGGRG-GEWHDM-LHWAVAGYAVFVMDV-RGQGSSSQDTADPPGGPSDPGFMTRGIL 145 (321)
T ss_pred EEEEEEeecccCCccceEEEEeeccCCC-CCcccc-ccccccceeEEEEec-ccCCCccccCCCCCCCCcCCceeEeecc
Confidence 8899998863 458999999977654 222232 347788999999999 998766332 11 233333222
Q ss_pred ------CCCcchhcHHHHHHHHHhc---CCceEEEEEeeccHHHHHHcc-CCcCceEEEEeccCCcCc------------
Q 026476 97 ------GVDKGFEEAKPVIQALKSK---GITAIGAAGFCWGAKVVVQLG-KREFIQAAVLLHPSFVTV------------ 154 (238)
Q Consensus 97 ------~~~~~~~d~~~~~~~l~~~---~~~~i~l~G~S~GG~~a~~~a-~~~~i~a~i~~~~~~~~~------------ 154 (238)
-......|+..+++.+.+. +.+||++.|.|+||.+++..+ .+++|+++++.+|-+-..
T Consensus 146 D~kd~yyyr~v~~D~~~ave~~~sl~~vde~Ri~v~G~SqGGglalaaaal~~rik~~~~~~Pfl~df~r~i~~~~~~~y 225 (321)
T COG3458 146 DRKDTYYYRGVFLDAVRAVEILASLDEVDEERIGVTGGSQGGGLALAAAALDPRIKAVVADYPFLSDFPRAIELATEGPY 225 (321)
T ss_pred cCCCceEEeeehHHHHHHHHHHhccCccchhheEEeccccCchhhhhhhhcChhhhcccccccccccchhheeecccCcH
Confidence 1246677888888888776 578999999999999999976 678999999887643210
Q ss_pred ---------------------------ccccccCCcEEEEecCCCCCCCHHhHHHHHHHHhhcCCCCceEEEcCCCCeee
Q 026476 155 ---------------------------DDIKGVEVPLSILGAEIDRLSPPALVKEFEEALNAKSGVDSFVKIFPKVAHGW 207 (238)
Q Consensus 155 ---------------------------~~~~~~~~P~L~i~g~~D~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~H~~ 207 (238)
....+++.|+|+..|-.|+++||...-.+++.+. . ++++.+|+--.|.-
T Consensus 226 dei~~y~k~h~~~e~~v~~TL~yfD~~n~A~RiK~pvL~svgL~D~vcpPstqFA~yN~l~-~---~K~i~iy~~~aHe~ 301 (321)
T COG3458 226 DEIQTYFKRHDPKEAEVFETLSYFDIVNLAARIKVPVLMSVGLMDPVCPPSTQFAAYNALT-T---SKTIEIYPYFAHEG 301 (321)
T ss_pred HHHHHHHHhcCchHHHHHHHHhhhhhhhHHHhhccceEEeecccCCCCCChhhHHHhhccc-C---CceEEEeecccccc
Confidence 0145789999999999999999999888888883 2 55678888667765
Q ss_pred ee
Q 026476 208 TV 209 (238)
Q Consensus 208 ~~ 209 (238)
..
T Consensus 302 ~p 303 (321)
T COG3458 302 GP 303 (321)
T ss_pred Cc
Confidence 43
No 69
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=99.69 E-value=4.1e-16 Score=120.99 Aligned_cols=135 Identities=25% Similarity=0.364 Sum_probs=90.9
Q ss_pred hcHHHHHHHHHhc---CCceEEEEEeeccHHHHHHcc-CCcCceEEEEeccCCcC-------------------------
Q 026476 103 EEAKPVIQALKSK---GITAIGAAGFCWGAKVVVQLG-KREFIQAAVLLHPSFVT------------------------- 153 (238)
Q Consensus 103 ~d~~~~~~~l~~~---~~~~i~l~G~S~GG~~a~~~a-~~~~i~a~i~~~~~~~~------------------------- 153 (238)
+-+..+++||+++ +.++|+|+|.|.||-+|+.+| ..+.|+++|++.|....
T Consensus 4 Eyfe~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~~i~avVa~~ps~~~~~~~~~~~~~~~~lp~~~~~~~~~~ 83 (213)
T PF08840_consen 4 EYFEEAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFPQISAVVAISPSSVVFQGIGFYRDSSKPLPYLPFDISKFS 83 (213)
T ss_dssp HHHHHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSSSEEEEEEES--SB--SSEEEETTE--EE----B-GGG-E
T ss_pred HHHHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCCCccEEEEeCCceeEecchhcccCCCccCCcCCcChhhce
Confidence 5678899999988 357999999999999999988 56799999988654210
Q ss_pred ---------------c---------ccccccCCcEEEEecCCCCCCCHH-hHHHHHHHHhhcCCC--CceEEEcCCCCee
Q 026476 154 ---------------V---------DDIKGVEVPLSILGAEIDRLSPPA-LVKEFEEALNAKSGV--DSFVKIFPKVAHG 206 (238)
Q Consensus 154 ---------------~---------~~~~~~~~P~L~i~g~~D~~~p~~-~~~~~~~~~~~~~~~--~~~~~~~~g~~H~ 206 (238)
. -.+.++++|+|+|.|++|.+.|.. .++.+.+.++ +.+. ++++..|+++||.
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~a~IpvE~i~~piLli~g~dD~~WpS~~~a~~i~~rL~-~~~~~~~~~~l~Y~~aGH~ 162 (213)
T PF08840_consen 84 WNEPGLLRSRYAFELADDKAVEEARIPVEKIKGPILLISGEDDQIWPSSEMAEQIEERLK-AAGFPHNVEHLSYPGAGHL 162 (213)
T ss_dssp E-TTS-EE-TT-B--TTTGGGCCCB--GGG--SEEEEEEETT-SSS-HHHHHHHHHHHHH-CTT-----EEEEETTB-S-
T ss_pred ecCCcceehhhhhhcccccccccccccHHHcCCCEEEEEeCCCCccchHHHHHHHHHHHH-HhCCCCcceEEEcCCCCce
Confidence 0 015678999999999999999875 4666777774 4443 5788889999999
Q ss_pred eeecCCCC-----------------CHH-HHHHHHHHHHHHHHHHHHhcC
Q 026476 207 WTVRYNVE-----------------DET-AVKAAEEAHHNLLEWFAKYVK 238 (238)
Q Consensus 207 ~~~~~~~~-----------------~~~-~~~~~~~~~~~~~~fl~~~~~ 238 (238)
+..++.+. .+. +..+.++.|+.+++||++||.
T Consensus 163 i~~Py~P~~~~~~~~~~~~~~~~GG~~~~~a~A~~dsW~~~l~Fl~~~L~ 212 (213)
T PF08840_consen 163 IEPPYFPHCRASYHKFIGTPLAWGGEPEAHAKAQEDSWKKILEFLRKHLG 212 (213)
T ss_dssp --STT-----EEEETTTTEEEE--B-HHHHHHHHHHHHHHHHHHHHHH--
T ss_pred ecCCCCCCcccccccccCCcccCCCChHHHHHHHHHHHHHHHHHHHHHhC
Confidence 97665431 122 235688999999999999974
No 70
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=99.69 E-value=5.1e-15 Score=121.76 Aligned_cols=184 Identities=24% Similarity=0.311 Sum_probs=132.1
Q ss_pred eeEEEecC--CC--CCeeEEEEeccC---CCCCchHHHHHHHHHHCCCEEEeccCCCCCccCCCCCcchHhhHhhcCCCc
Q 026476 28 LNAYVTGS--PD--SKLAVLLISDVY---GYEAPNLRKLADKVAAAGFYVAVPDFFHGDPYVADGGKPLQEWIKDHGVDK 100 (238)
Q Consensus 28 ~~~~~~~p--~~--~~~~vl~~hg~~---g~~~~~~~~~a~~l~~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~ 100 (238)
++..++.| .. +.|+||++||+. |........++..++..|+.|+++|| |--+ +..+..
T Consensus 64 ~~~~~y~p~~~~~~~~p~vly~HGGg~~~g~~~~~~~~~~~~~~~~g~~vv~vdY-rlaP--------------e~~~p~ 128 (312)
T COG0657 64 VPVRVYRPDRKAAATAPVVLYLHGGGWVLGSLRTHDALVARLAAAAGAVVVSVDY-RLAP--------------EHPFPA 128 (312)
T ss_pred eeEEEECCCCCCCCCCcEEEEEeCCeeeecChhhhHHHHHHHHHHcCCEEEecCC-CCCC--------------CCCCCc
Confidence 66777777 32 358899999854 23212223455555567999999999 3322 334456
Q ss_pred chhcHHHHHHHHHhc------CCceEEEEEeeccHHHHHHccC--C----cCceEEEEeccCCcCc--------------
Q 026476 101 GFEEAKPVIQALKSK------GITAIGAAGFCWGAKVVVQLGK--R----EFIQAAVLLHPSFVTV-------------- 154 (238)
Q Consensus 101 ~~~d~~~~~~~l~~~------~~~~i~l~G~S~GG~~a~~~a~--~----~~i~a~i~~~~~~~~~-------------- 154 (238)
.++|+.+++.+++++ +.++|+++|+|.||.+++.++. + +...+.+++++.....
T Consensus 129 ~~~d~~~a~~~l~~~~~~~g~dp~~i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~~d~~~~~~~~~~~~~~~~ 208 (312)
T COG0657 129 ALEDAYAAYRWLRANAAELGIDPSRIAVAGDSAGGHLALALALAARDRGLPLPAAQVLISPLLDLTSSAASLPGYGEADL 208 (312)
T ss_pred hHHHHHHHHHHHHhhhHhhCCCccceEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEecccCCcccccchhhcCCccc
Confidence 788999999999866 4789999999999999999772 1 3577777777652210
Q ss_pred -------------------------------ccccccCCcEEEEecCCCCCCCHHhHHHHHHHHhhcCCCCceEEEcCCC
Q 026476 155 -------------------------------DDIKGVEVPLSILGAEIDRLSPPALVKEFEEALNAKSGVDSFVKIFPKV 203 (238)
Q Consensus 155 -------------------------------~~~~~~~~P~L~i~g~~D~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~ 203 (238)
+.+.. ..|+++++|+.|.+.+ +...+.+.+ ++.|++++++.++|+
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~p~~spl~~~~~~~-lPP~~i~~a~~D~l~~--~~~~~a~~L-~~agv~~~~~~~~g~ 284 (312)
T COG0657 209 LDAAAILAWFADLYLGAAPDREDPEASPLASDDLSG-LPPTLIQTAEFDPLRD--EGEAYAERL-RAAGVPVELRVYPGM 284 (312)
T ss_pred cCHHHHHHHHHHHhCcCccccCCCccCccccccccC-CCCEEEEecCCCcchh--HHHHHHHHH-HHcCCeEEEEEeCCc
Confidence 00222 5799999999999876 778889999 678899999999999
Q ss_pred CeeeeecCCCCCHHHHHHHHHHHHHHHHHHHHhc
Q 026476 204 AHGWTVRYNVEDETAVKAAEEAHHNLLEWFAKYV 237 (238)
Q Consensus 204 ~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~ 237 (238)
.|+|..-.. ..+.+.+..+.+|+.+.+
T Consensus 285 ~H~f~~~~~-------~~a~~~~~~~~~~l~~~~ 311 (312)
T COG0657 285 IHGFDLLTG-------PEARSALRQIAAFLRAAL 311 (312)
T ss_pred ceeccccCc-------HHHHHHHHHHHHHHHHhc
Confidence 999954332 145566888888888554
No 71
>COG0400 Predicted esterase [General function prediction only]
Probab=99.69 E-value=8.6e-16 Score=117.49 Aligned_cols=177 Identities=19% Similarity=0.222 Sum_probs=118.7
Q ss_pred CeeEEEEeccCCCCCchHHHHHHHHHHCCCEEEeccCCCCCccCCCCCcchHhhHhhcC--CCcchhcHHHHHHHHH---
Q 026476 39 KLAVLLISDVYGYEAPNLRKLADKVAAAGFYVAVPDFFHGDPYVADGGKPLQEWIKDHG--VDKGFEEAKPVIQALK--- 113 (238)
Q Consensus 39 ~~~vl~~hg~~g~~~~~~~~~a~~l~~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~--~~~~~~d~~~~~~~l~--- 113 (238)
.|.||++||.+|.. ..+..+...+..+ +.++.|... ..-.+ ...+..|..... .+....+.....+++.
T Consensus 18 ~~~iilLHG~Ggde-~~~~~~~~~~~P~-~~~is~rG~---v~~~g-~~~~f~~~~~~~~d~edl~~~~~~~~~~l~~~~ 91 (207)
T COG0400 18 APLLILLHGLGGDE-LDLVPLPELILPN-ATLVSPRGP---VAENG-GPRFFRRYDEGSFDQEDLDLETEKLAEFLEELA 91 (207)
T ss_pred CcEEEEEecCCCCh-hhhhhhhhhcCCC-CeEEcCCCC---ccccC-cccceeecCCCccchhhHHHHHHHHHHHHHHHH
Confidence 46799999987764 4455555555444 666665442 11000 111111111111 1223333344444443
Q ss_pred hc---CCceEEEEEeeccHHHHHHcc-CCc-CceEEEEeccCCcCccc-c-cccCCcEEEEecCCCCCCCHHhHHHHHHH
Q 026476 114 SK---GITAIGAAGFCWGAKVVVQLG-KRE-FIQAAVLLHPSFVTVDD-I-KGVEVPLSILGAEIDRLSPPALVKEFEEA 186 (238)
Q Consensus 114 ~~---~~~~i~l~G~S~GG~~a~~~a-~~~-~i~a~i~~~~~~~~~~~-~-~~~~~P~L~i~g~~D~~~p~~~~~~~~~~ 186 (238)
++ +.+++.++|||.|+.+++.+. ..+ .++++++++|....... . .....|+|++||+.|+++|...+.++.+.
T Consensus 92 ~~~gi~~~~ii~~GfSqGA~ial~~~l~~~~~~~~ail~~g~~~~~~~~~~~~~~~pill~hG~~Dpvvp~~~~~~l~~~ 171 (207)
T COG0400 92 EEYGIDSSRIILIGFSQGANIALSLGLTLPGLFAGAILFSGMLPLEPELLPDLAGTPILLSHGTEDPVVPLALAEALAEY 171 (207)
T ss_pred HHhCCChhheEEEecChHHHHHHHHHHhCchhhccchhcCCcCCCCCccccccCCCeEEEeccCcCCccCHHHHHHHHHH
Confidence 22 468999999999999999977 444 78999999887765432 2 23467999999999999999999999999
Q ss_pred HhhcCCCCceEEEcCCCCeeeeecCCCCCHHHHHHHHHHHHHHHHHHHHhc
Q 026476 187 LNAKSGVDSFVKIFPKVAHGWTVRYNVEDETAVKAAEEAHHNLLEWFAKYV 237 (238)
Q Consensus 187 ~~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~ 237 (238)
+ ++.|.+++.+.++ ++|.+. .+..+.+.+|+.+.+
T Consensus 172 l-~~~g~~v~~~~~~-~GH~i~--------------~e~~~~~~~wl~~~~ 206 (207)
T COG0400 172 L-TASGADVEVRWHE-GGHEIP--------------PEELEAARSWLANTL 206 (207)
T ss_pred H-HHcCCCEEEEEec-CCCcCC--------------HHHHHHHHHHHHhcc
Confidence 9 5688999999999 799985 366777778888754
No 72
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.68 E-value=3.4e-15 Score=122.52 Aligned_cols=186 Identities=13% Similarity=0.124 Sum_probs=116.4
Q ss_pred EEeeCCeeEEEecCC-CCCeeEEEEeccCCCCCchHHHHHHHHHHCCCEEEeccCCCCCccCCCCCcchHhhHhhcCCCc
Q 026476 22 VEKLGGLNAYVTGSP-DSKLAVLLISDVYGYEAPNLRKLADKVAAAGFYVAVPDFFHGDPYVADGGKPLQEWIKDHGVDK 100 (238)
Q Consensus 22 ~~~~~~~~~~~~~p~-~~~~~vl~~hg~~g~~~~~~~~~a~~l~~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~ 100 (238)
+...++...++.... ...++||++||+.+.. .. ..+...+...+|.|+++|+ +|+|.+...... .......
T Consensus 9 ~~~~~~~~l~y~~~g~~~~~~lvllHG~~~~~-~~-~~~~~~~~~~~~~vi~~D~-~G~G~S~~~~~~-----~~~~~~~ 80 (306)
T TIGR01249 9 LNVSDNHQLYYEQSGNPDGKPVVFLHGGPGSG-TD-PGCRRFFDPETYRIVLFDQ-RGCGKSTPHACL-----EENTTWD 80 (306)
T ss_pred EEcCCCcEEEEEECcCCCCCEEEEECCCCCCC-CC-HHHHhccCccCCEEEEECC-CCCCCCCCCCCc-----ccCCHHH
Confidence 333345555544322 2256899999977653 22 3455556567899999999 999877532100 0111122
Q ss_pred chhcHHHHHHHHHhcCCceEEEEEeeccHHHHHHcc-CCc-CceEEEEeccC----------------------------
Q 026476 101 GFEEAKPVIQALKSKGITAIGAAGFCWGAKVVVQLG-KRE-FIQAAVLLHPS---------------------------- 150 (238)
Q Consensus 101 ~~~d~~~~~~~l~~~~~~~i~l~G~S~GG~~a~~~a-~~~-~i~a~i~~~~~---------------------------- 150 (238)
..+|+..+++. .+.+++.++||||||.+++.++ ..| .++++|++...
T Consensus 81 ~~~dl~~l~~~---l~~~~~~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (306)
T TIGR01249 81 LVADIEKLREK---LGIKNWLVFGGSWGSTLALAYAQTHPEVVTGLVLRGIFLLREKEWSWFYEGGASMIYPDAWQRFMD 157 (306)
T ss_pred HHHHHHHHHHH---cCCCCEEEEEECHHHHHHHHHHHHChHhhhhheeeccccCCHHHHHHHHhcchhhhCHHHHHHHhh
Confidence 33444444433 3567899999999999999987 444 45544443210
Q ss_pred -----Cc---------------C---------------c-----------------------------------------
Q 026476 151 -----FV---------------T---------------V----------------------------------------- 154 (238)
Q Consensus 151 -----~~---------------~---------------~----------------------------------------- 154 (238)
.. . .
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (306)
T TIGR01249 158 SIPENERNEQLVNAYHDRLQSGDEETKLAAAKAWVDWESTTLLRPINEIVSTAEDFKFSLAFARLENHYFVNKGFLDVEN 237 (306)
T ss_pred hCChhhhhccHHHHHHHHccCCCHHHHHHHHHHHHHHhChhhcCCCCCccccccchHHHHHHHHHHHhHHHHhchhcCch
Confidence 00 0 0
Q ss_pred ---cccccc-CCcEEEEecCCCCCCCHHhHHHHHHHHhhcCCCCceEEEcCCCCeeeeecCCCCCHHHHHHHHHHHHHHH
Q 026476 155 ---DDIKGV-EVPLSILGAEIDRLSPPALVKEFEEALNAKSGVDSFVKIFPKVAHGWTVRYNVEDETAVKAAEEAHHNLL 230 (238)
Q Consensus 155 ---~~~~~~-~~P~L~i~g~~D~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (238)
..+.++ ++|+|+++|++|.++|.+.++.+.+.+. +.+++++++++|.... +...+.+.
T Consensus 238 ~~~~~~~~i~~~P~lii~g~~D~~~p~~~~~~~~~~~~-----~~~~~~~~~~gH~~~~-------------~~~~~~i~ 299 (306)
T TIGR01249 238 FILDNISKIRNIPTYIVHGRYDLCCPLQSAWALHKAFP-----EAELKVTNNAGHSAFD-------------PNNLAALV 299 (306)
T ss_pred HHHHhhhhccCCCeEEEecCCCCCCCHHHHHHHHHhCC-----CCEEEEECCCCCCCCC-------------hHHHHHHH
Confidence 001233 5899999999999999999998888762 4568899999999743 24556666
Q ss_pred HHHHHh
Q 026476 231 EWFAKY 236 (238)
Q Consensus 231 ~fl~~~ 236 (238)
+|+.+.
T Consensus 300 ~~~~~~ 305 (306)
T TIGR01249 300 HALETY 305 (306)
T ss_pred HHHHHh
Confidence 666654
No 73
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=99.66 E-value=1.2e-15 Score=127.54 Aligned_cols=65 Identities=18% Similarity=0.306 Sum_probs=47.8
Q ss_pred ccCCcEEEEecCCCCCCCHHhHHHHHHHHhhcCCCCceE-EEcCCCCeeeeecCCCCCHHHHHHHHHHHHHHHHHHH
Q 026476 159 GVEVPLSILGAEIDRLSPPALVKEFEEALNAKSGVDSFV-KIFPKVAHGWTVRYNVEDETAVKAAEEAHHNLLEWFA 234 (238)
Q Consensus 159 ~~~~P~L~i~g~~D~~~p~~~~~~~~~~~~~~~~~~~~~-~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~ 234 (238)
++++|+|+|+|++|.++|++.++.+.+.++ +....+++ .++++++|..... ..++..+.+.+||+
T Consensus 286 ~I~~P~Lvi~G~~D~~~p~~~~~~~a~~i~-~~~~~v~~~~i~~~~GH~~~le----------~p~~~~~~l~~FL~ 351 (351)
T TIGR01392 286 RIKAPFLVVSITSDWLFPPAESRELAKALP-AAGLRVTYVEIESPYGHDAFLV----------ETDQVEELIRGFLR 351 (351)
T ss_pred hCCCCEEEEEeCCccccCHHHHHHHHHHHh-hcCCceEEEEeCCCCCcchhhc----------CHHHHHHHHHHHhC
Confidence 567899999999999999999999999883 22212222 2567889987653 23677788888874
No 74
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=99.66 E-value=6.1e-14 Score=114.66 Aligned_cols=190 Identities=17% Similarity=0.254 Sum_probs=142.5
Q ss_pred eeCCeeEEEecCCC-----CCeeEEEEeccC---C-CCCchHHHHHHHHHHC-CCEEEeccCCCCCccCCCCCcchHhhH
Q 026476 24 KLGGLNAYVTGSPD-----SKLAVLLISDVY---G-YEAPNLRKLADKVAAA-GFYVAVPDFFHGDPYVADGGKPLQEWI 93 (238)
Q Consensus 24 ~~~~~~~~~~~p~~-----~~~~vl~~hg~~---g-~~~~~~~~~a~~l~~~-G~~v~~~d~~~g~~~~~~~~~~~~~~~ 93 (238)
+.+++...++.|.. +.|.||++||++ | .....++.++..++.. ++.|+.+|| |--+
T Consensus 70 ~~~~l~vRly~P~~~~~~~~~p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~~~~vvvSVdY-RLAP------------- 135 (336)
T KOG1515|consen 70 PFTNLPVRLYRPTSSSSETKLPVLVYFHGGGFCLGSANSPAYDSFCTRLAAELNCVVVSVDY-RLAP------------- 135 (336)
T ss_pred CCCCeEEEEEcCCCCCcccCceEEEEEeCCccEeCCCCCchhHHHHHHHHHHcCeEEEecCc-ccCC-------------
Confidence 44678888888752 348899999864 2 2356788999999665 999999999 4433
Q ss_pred hhcCCCcchhcHHHHHHHHHhc-------CCceEEEEEeeccHHHHHHccC--------CcCceEEEEeccCCcCc----
Q 026476 94 KDHGVDKGFEEAKPVIQALKSK-------GITAIGAAGFCWGAKVVVQLGK--------REFIQAAVLLHPSFVTV---- 154 (238)
Q Consensus 94 ~~~~~~~~~~d~~~~~~~l~~~-------~~~~i~l~G~S~GG~~a~~~a~--------~~~i~a~i~~~~~~~~~---- 154 (238)
+..+....+|...++.|+.++ |.+||+++|-|.||.+|..++. .+++++.|+++|.+...
T Consensus 136 -Eh~~Pa~y~D~~~Al~w~~~~~~~~~~~D~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~~~~~~~ 214 (336)
T KOG1515|consen 136 -EHPFPAAYDDGWAALKWVLKNSWLKLGADPSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQGTDRTE 214 (336)
T ss_pred -CCCCCccchHHHHHHHHHHHhHHHHhCCCcccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccCCCCCCC
Confidence 334455678888888887663 6889999999999999998762 24799999998754310
Q ss_pred -----------------------------------------c-----ccccc-CCcEEEEecCCCCCCCHHhHHHHHHHH
Q 026476 155 -----------------------------------------D-----DIKGV-EVPLSILGAEIDRLSPPALVKEFEEAL 187 (238)
Q Consensus 155 -----------------------------------------~-----~~~~~-~~P~L~i~g~~D~~~p~~~~~~~~~~~ 187 (238)
. +..-. ..|+|++.++.|.+. ++...+.++|
T Consensus 215 ~e~~~~~~~~~~~~~~~~~~~w~~~lP~~~~~~~~p~~np~~~~~~~d~~~~~lp~tlv~~ag~D~L~--D~~~~Y~~~L 292 (336)
T KOG1515|consen 215 SEKQQNLNGSPELARPKIDKWWRLLLPNGKTDLDHPFINPVGNSLAKDLSGLGLPPTLVVVAGYDVLR--DEGLAYAEKL 292 (336)
T ss_pred HHHHHhhcCCcchhHHHHHHHHHHhCCCCCCCcCCccccccccccccCccccCCCceEEEEeCchhhh--hhhHHHHHHH
Confidence 0 01111 236999999999864 7788889999
Q ss_pred hhcCCCCceEEEcCCCCeeeeecCCCCCHHHHHHHHHHHHHHHHHHHHh
Q 026476 188 NAKSGVDSFVKIFPKVAHGWTVRYNVEDETAVKAAEEAHHNLLEWFAKY 236 (238)
Q Consensus 188 ~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~ 236 (238)
++.|+++++..++++.|+|..-.... ..+.+..+.+.+|+++.
T Consensus 293 -kk~Gv~v~~~~~e~~~H~~~~~~~~~-----~~a~~~~~~i~~fi~~~ 335 (336)
T KOG1515|consen 293 -KKAGVEVTLIHYEDGFHGFHILDPSS-----KEAHALMDAIVEFIKSN 335 (336)
T ss_pred -HHcCCeEEEEEECCCeeEEEecCCch-----hhHHHHHHHHHHHHhhc
Confidence 67899999889999999998655431 35788899999999864
No 75
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.65 E-value=7.3e-15 Score=120.80 Aligned_cols=175 Identities=20% Similarity=0.238 Sum_probs=121.9
Q ss_pred CCeeEEEEeccCCCCCchHHHHHHHHHHC-CCEEEeccCCCCCccCCCCCcchHhhHhhcCCCcchhcHHHHHHHHHhcC
Q 026476 38 SKLAVLLISDVYGYEAPNLRKLADKVAAA-GFYVAVPDFFHGDPYVADGGKPLQEWIKDHGVDKGFEEAKPVIQALKSKG 116 (238)
Q Consensus 38 ~~~~vl~~hg~~g~~~~~~~~~a~~l~~~-G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~ 116 (238)
..++||++||+.++ ...++.....|.+. |+.|+++|. .|+|++...... ..-...+.+..+.+...+..
T Consensus 57 ~~~pvlllHGF~~~-~~~w~~~~~~L~~~~~~~v~aiDl-~G~g~~s~~~~~--------~~y~~~~~v~~i~~~~~~~~ 126 (326)
T KOG1454|consen 57 DKPPVLLLHGFGAS-SFSWRRVVPLLSKAKGLRVLAIDL-PGHGYSSPLPRG--------PLYTLRELVELIRRFVKEVF 126 (326)
T ss_pred CCCcEEEeccccCC-cccHhhhccccccccceEEEEEec-CCCCcCCCCCCC--------CceehhHHHHHHHHHHHhhc
Confidence 56899999998875 46678888888877 699999999 787743322111 11112222333334444446
Q ss_pred CceEEEEEeeccHHHHHHcc-CCc-CceEEE---EeccCCcC--------------------------------------
Q 026476 117 ITAIGAAGFCWGAKVVVQLG-KRE-FIQAAV---LLHPSFVT-------------------------------------- 153 (238)
Q Consensus 117 ~~~i~l~G~S~GG~~a~~~a-~~~-~i~a~i---~~~~~~~~-------------------------------------- 153 (238)
..++.++|||+||.++..+| ..| .++..+ .+.+....
T Consensus 127 ~~~~~lvghS~Gg~va~~~Aa~~P~~V~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 206 (326)
T KOG1454|consen 127 VEPVSLVGHSLGGIVALKAAAYYPETVDSLVLLDLLGPPVYSTPKGIKGLRRLLDKFLSALELLIPLSLTEPVRLVSEGL 206 (326)
T ss_pred CcceEEEEeCcHHHHHHHHHHhCcccccceeeecccccccccCCcchhHHHHhhhhhccHhhhcCccccccchhheeHhh
Confidence 67899999999999999988 444 577776 33211100
Q ss_pred -------------------------------------------------cccccccC-CcEEEEecCCCCCCCHHhHHHH
Q 026476 154 -------------------------------------------------VDDIKGVE-VPLSILGAEIDRLSPPALVKEF 183 (238)
Q Consensus 154 -------------------------------------------------~~~~~~~~-~P~L~i~g~~D~~~p~~~~~~~ 183 (238)
.+.+.++. +|+|+++|++|+++|.+.+..+
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~pvlii~G~~D~~~p~~~~~~~ 286 (326)
T KOG1454|consen 207 LRCLKVVYTDPSRLLEKLLHLLSRPVKEHFHRDARLSLFLELLGFDENLLSLIKKIWKCPVLIIWGDKDQIVPLELAEEL 286 (326)
T ss_pred hcceeeeccccccchhhhhhheecccccchhhhheeeEEEeccCccchHHHhhccccCCceEEEEcCcCCccCHHHHHHH
Confidence 00134455 9999999999999999977777
Q ss_pred HHHHhhcCCCCceEEEcCCCCeeeeecCCCCCHHHHHHHHHHHHHHHHHHHHhc
Q 026476 184 EEALNAKSGVDSFVKIFPKVAHGWTVRYNVEDETAVKAAEEAHHNLLEWFAKYV 237 (238)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~ 237 (238)
.+.+ .+.+++++++++|.-... ..++....+..|++++.
T Consensus 287 ~~~~-----pn~~~~~I~~~gH~~h~e----------~Pe~~~~~i~~Fi~~~~ 325 (326)
T KOG1454|consen 287 KKKL-----PNAELVEIPGAGHLPHLE----------RPEEVAALLRSFIARLR 325 (326)
T ss_pred HhhC-----CCceEEEeCCCCcccccC----------CHHHHHHHHHHHHHHhc
Confidence 7655 267899999999988663 34678889999998763
No 76
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=99.64 E-value=1.5e-14 Score=119.20 Aligned_cols=179 Identities=17% Similarity=0.230 Sum_probs=122.0
Q ss_pred CCeeEEEEeccCC-CCCchHHHHHHHHHHCCCEEEeccCCCCCccCCCCCcchHhhHhhcCCCcchhcHHHHHHHHHhc-
Q 026476 38 SKLAVLLISDVYG-YEAPNLRKLADKVAAAGFYVAVPDFFHGDPYVADGGKPLQEWIKDHGVDKGFEEAKPVIQALKSK- 115 (238)
Q Consensus 38 ~~~~vl~~hg~~g-~~~~~~~~~a~~l~~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~- 115 (238)
..|.||++||..| ++...++.++....+.||.|++++. ||.+.++-... +.-....-+|+.+++++++++
T Consensus 124 ~~P~vvilpGltg~S~~~YVr~lv~~a~~~G~r~VVfN~-RG~~g~~LtTp-------r~f~ag~t~Dl~~~v~~i~~~~ 195 (409)
T KOG1838|consen 124 TDPIVVILPGLTGGSHESYVRHLVHEAQRKGYRVVVFNH-RGLGGSKLTTP-------RLFTAGWTEDLREVVNHIKKRY 195 (409)
T ss_pred CCcEEEEecCCCCCChhHHHHHHHHHHHhCCcEEEEECC-CCCCCCccCCC-------ceeecCCHHHHHHHHHHHHHhC
Confidence 4589999999876 4456778999999999999999999 89765542100 111134568999999999988
Q ss_pred CCceEEEEEeeccHHHHHHccC----CcCceEEEEeccCCcC--------------------------------------
Q 026476 116 GITAIGAAGFCWGAKVVVQLGK----REFIQAAVLLHPSFVT-------------------------------------- 153 (238)
Q Consensus 116 ~~~~i~l~G~S~GG~~a~~~a~----~~~i~a~i~~~~~~~~-------------------------------------- 153 (238)
+..++..+|+||||.+...+.. +..+.+++++..++..
T Consensus 196 P~a~l~avG~S~Gg~iL~nYLGE~g~~~~l~~a~~v~~Pwd~~~~~~~~~~~~~~~~y~~~l~~~l~~~~~~~r~~~~~~ 275 (409)
T KOG1838|consen 196 PQAPLFAVGFSMGGNILTNYLGEEGDNTPLIAAVAVCNPWDLLAASRSIETPLYRRFYNRALTLNLKRIVLRHRHTLFED 275 (409)
T ss_pred CCCceEEEEecchHHHHHHHhhhccCCCCceeEEEEeccchhhhhhhHHhcccchHHHHHHHHHhHHHHHhhhhhhhhhc
Confidence 5668999999999999999653 2256666665443321
Q ss_pred ---------------------------------------cccccccCCcEEEEecCCCCCCCHHhHHHHHHHHhhcCCCC
Q 026476 154 ---------------------------------------VDDIKGVEVPLSILGAEIDRLSPPALVKEFEEALNAKSGVD 194 (238)
Q Consensus 154 ---------------------------------------~~~~~~~~~P~L~i~g~~D~~~p~~~~~~~~~~~~~~~~~~ 194 (238)
...+.+|++|+|+|++.+|+++|.+.... +.+.+++ +
T Consensus 276 ~vd~d~~~~~~SvreFD~~~t~~~~gf~~~deYY~~aSs~~~v~~I~VP~L~ina~DDPv~p~~~ip~--~~~~~np--~ 351 (409)
T KOG1838|consen 276 PVDFDVILKSRSVREFDEALTRPMFGFKSVDEYYKKASSSNYVDKIKVPLLCINAADDPVVPEEAIPI--DDIKSNP--N 351 (409)
T ss_pred cchhhhhhhcCcHHHHHhhhhhhhcCCCcHHHHHhhcchhhhcccccccEEEEecCCCCCCCcccCCH--HHHhcCC--c
Confidence 01167899999999999999998864332 2221333 5
Q ss_pred ceEEEcCCCCe-eeeecCCCCCHHHHHHHHHHHHH-HHHHHHH
Q 026476 195 SFVKIFPKVAH-GWTVRYNVEDETAVKAAEEAHHN-LLEWFAK 235 (238)
Q Consensus 195 ~~~~~~~g~~H-~~~~~~~~~~~~~~~~~~~~~~~-~~~fl~~ 235 (238)
+-+.+-.-+|| ||.....++ ...++++ +.+||..
T Consensus 352 v~l~~T~~GGHlgfleg~~p~-------~~~w~~~~l~ef~~~ 387 (409)
T KOG1838|consen 352 VLLVITSHGGHLGFLEGLWPS-------ARTWMDKLLVEFLGN 387 (409)
T ss_pred EEEEEeCCCceeeeeccCCCc-------cchhHHHHHHHHHHH
Confidence 55555555677 666543221 1234444 6777764
No 77
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.63 E-value=6.7e-14 Score=100.08 Aligned_cols=194 Identities=16% Similarity=0.184 Sum_probs=122.3
Q ss_pred EEEecCCCCCeeEE-EEeccCC-CCCchHHHHHHHHHHCCCEEEeccCCCCCccCCCCCcchHhhHhhcCCCcchhcHHH
Q 026476 30 AYVTGSPDSKLAVL-LISDVYG-YEAPNLRKLADKVAAAGFYVAVPDFFHGDPYVADGGKPLQEWIKDHGVDKGFEEAKP 107 (238)
Q Consensus 30 ~~~~~p~~~~~~vl-~~hg~~g-~~~~~~~~~a~~l~~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 107 (238)
.++..|.++.+++| +.||..+ .....+...|..|+.+|+.|.-+++.....+..+..+. .............
T Consensus 4 ~~~~~pag~~~~tilLaHGAGasmdSt~m~~~a~~la~~G~~vaRfefpYma~Rrtg~rkP------p~~~~t~~~~~~~ 77 (213)
T COG3571 4 GFLFDPAGPAPVTILLAHGAGASMDSTSMTAVAAALARRGWLVARFEFPYMAARRTGRRKP------PPGSGTLNPEYIV 77 (213)
T ss_pred ccccCCCCCCCEEEEEecCCCCCCCCHHHHHHHHHHHhCceeEEEeecchhhhccccCCCC------cCccccCCHHHHH
Confidence 45567777666555 5555443 34567889999999999999999984111111110000 0000111122233
Q ss_pred HHHHHHhc-CCceEEEEEeeccHHHHHHccC--CcCceEEEEeccCCcC--------cccccccCCcEEEEecCCCCCCC
Q 026476 108 VIQALKSK-GITAIGAAGFCWGAKVVVQLGK--REFIQAAVLLHPSFVT--------VDDIKGVEVPLSILGAEIDRLSP 176 (238)
Q Consensus 108 ~~~~l~~~-~~~~i~l~G~S~GG~~a~~~a~--~~~i~a~i~~~~~~~~--------~~~~~~~~~P~L~i~g~~D~~~p 176 (238)
.+..++.. ...++.+-|+||||.++.+++. .-.|++.+++.-++.+ .+++..+++|+||.+|+.|++-.
T Consensus 78 ~~aql~~~l~~gpLi~GGkSmGGR~aSmvade~~A~i~~L~clgYPfhppGKPe~~Rt~HL~gl~tPtli~qGtrD~fGt 157 (213)
T COG3571 78 AIAQLRAGLAEGPLIIGGKSMGGRVASMVADELQAPIDGLVCLGYPFHPPGKPEQLRTEHLTGLKTPTLITQGTRDEFGT 157 (213)
T ss_pred HHHHHHhcccCCceeeccccccchHHHHHHHhhcCCcceEEEecCccCCCCCcccchhhhccCCCCCeEEeecccccccC
Confidence 34445444 4568999999999999999883 2358888887544332 24578899999999999999988
Q ss_pred HHhHHHHHHHHhhcCCCCceEEEcCCCCeeeeecCCCCCHHHHHHHHHHHHHHHHHHHH
Q 026476 177 PALVKEFEEALNAKSGVDSFVKIFPKVAHGWTVRYNVEDETAVKAAEEAHHNLLEWFAK 235 (238)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~ 235 (238)
.+++..+. + ..+.+++++.++.|.+.....-+.....+......+.+..|..+
T Consensus 158 r~~Va~y~--l----s~~iev~wl~~adHDLkp~k~vsgls~~~hL~~~A~~va~~~~~ 210 (213)
T COG3571 158 RDEVAGYA--L----SDPIEVVWLEDADHDLKPRKLVSGLSTADHLKTLAEQVAGWARR 210 (213)
T ss_pred HHHHHhhh--c----CCceEEEEeccCccccccccccccccHHHHHHHHHHHHHHHHhh
Confidence 87773221 2 23889999999999986544221111113445566778888765
No 78
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.63 E-value=2.5e-14 Score=123.84 Aligned_cols=167 Identities=14% Similarity=0.155 Sum_probs=117.6
Q ss_pred CCeeEEEecCCC---CCeeEEEEeccCCCCCch----HHHHHHHHHHCCCEEEeccCCCCCccCCCCCcchHhhHhhcCC
Q 026476 26 GGLNAYVTGSPD---SKLAVLLISDVYGYEAPN----LRKLADKVAAAGFYVAVPDFFHGDPYVADGGKPLQEWIKDHGV 98 (238)
Q Consensus 26 ~~~~~~~~~p~~---~~~~vl~~hg~~g~~~~~----~~~~a~~l~~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~ 98 (238)
+-+..+.+.|.. ..++||++|++.....-. -+.++++|.++||.|+++|+ +|++.+... . +.
T Consensus 172 ~~~eLi~Y~P~t~~~~~~PlLiVp~~i~k~yilDL~p~~Slv~~L~~qGf~V~~iDw-rgpg~s~~~-~---------~~ 240 (532)
T TIGR01838 172 ELFQLIQYEPTTETVHKTPLLIVPPWINKYYILDLRPQNSLVRWLVEQGHTVFVISW-RNPDASQAD-K---------TF 240 (532)
T ss_pred CcEEEEEeCCCCCcCCCCcEEEECcccccceeeecccchHHHHHHHHCCcEEEEEEC-CCCCccccc-C---------Ch
Confidence 457888888864 347899999976532111 14899999999999999999 777644221 1 11
Q ss_pred Ccch-hcHHHHHHHHHhc-CCceEEEEEeeccHHHHH-----HccCC-c-CceEEEEeccCCcC----------------
Q 026476 99 DKGF-EEAKPVIQALKSK-GITAIGAAGFCWGAKVVV-----QLGKR-E-FIQAAVLLHPSFVT---------------- 153 (238)
Q Consensus 99 ~~~~-~d~~~~~~~l~~~-~~~~i~l~G~S~GG~~a~-----~~a~~-~-~i~a~i~~~~~~~~---------------- 153 (238)
+.+. +++.++++.+++. +.+++.++||||||.++. ..+.. + .+++++.+......
T Consensus 241 ddY~~~~i~~al~~v~~~~g~~kv~lvG~cmGGtl~a~ala~~aa~~~~~rv~slvll~t~~Df~~~G~l~~f~~~~~~~ 320 (532)
T TIGR01838 241 DDYIRDGVIAALEVVEAITGEKQVNCVGYCIGGTLLSTALAYLAARGDDKRIKSATFFTTLLDFSDPGELGVFVDEEIVA 320 (532)
T ss_pred hhhHHHHHHHHHHHHHHhcCCCCeEEEEECcCcHHHHHHHHHHHHhCCCCccceEEEEecCcCCCCcchhhhhcCchhHH
Confidence 1222 4577788887765 678999999999999852 22333 3 57777766432110
Q ss_pred --------------------------------------------------------------------------------
Q 026476 154 -------------------------------------------------------------------------------- 153 (238)
Q Consensus 154 -------------------------------------------------------------------------------- 153 (238)
T Consensus 321 ~~e~~~~~~G~lpg~~m~~~F~~lrp~~l~w~~~v~~yl~g~~~~~fdll~Wn~D~t~lP~~~~~~~lr~ly~~N~L~~G 400 (532)
T TIGR01838 321 GIERQNGGGGYLDGRQMAVTFSLLRENDLIWNYYVDNYLKGKSPVPFDLLFWNSDSTNLPGKMHNFYLRNLYLQNALTTG 400 (532)
T ss_pred HHHHHHHhcCCCCHHHHHHHHHhcChhhHHHHHHHHHHhcCCCccchhHHHHhccCccchHHHHHHHHHHHHhcCCCcCC
Confidence
Q ss_pred -------cccccccCCcEEEEecCCCCCCCHHhHHHHHHHHhhcCCCCceEEEcCCCCeeee
Q 026476 154 -------VDDIKGVEVPLSILGAEIDRLSPPALVKEFEEALNAKSGVDSFVKIFPKVAHGWT 208 (238)
Q Consensus 154 -------~~~~~~~~~P~L~i~g~~D~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~H~~~ 208 (238)
..++.++++|+|+++|++|.++|.+.+..+.+.+. ..+..++++++|...
T Consensus 401 ~~~v~g~~~dL~~I~vPvLvV~G~~D~IvP~~sa~~l~~~i~-----~~~~~vL~~sGHi~~ 457 (532)
T TIGR01838 401 GLEVCGVRLDLSKVKVPVYIIATREDHIAPWQSAYRGAALLG-----GPKTFVLGESGHIAG 457 (532)
T ss_pred eeEECCEecchhhCCCCEEEEeeCCCCcCCHHHHHHHHHHCC-----CCEEEEECCCCCchH
Confidence 01167789999999999999999999998887662 234567888999875
No 79
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=99.63 E-value=1e-14 Score=109.20 Aligned_cols=159 Identities=16% Similarity=0.178 Sum_probs=119.7
Q ss_pred CCeeEEEEeccCCC-CCchHHHHHHHHHHCCCEEEeccCCCCCccCCCCCcchHhhHhhcCCCcchhcHHHHHHHHHhcC
Q 026476 38 SKLAVLLISDVYGY-EAPNLRKLADKVAAAGFYVAVPDFFHGDPYVADGGKPLQEWIKDHGVDKGFEEAKPVIQALKSKG 116 (238)
Q Consensus 38 ~~~~vl~~hg~~g~-~~~~~~~~a~~l~~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~ 116 (238)
....+|++||.... +...+..+|..|++.||.++.+|+ +|.|.+.+. +... .....++|+..+++++....
T Consensus 32 s~e~vvlcHGfrS~Kn~~~~~~vA~~~e~~gis~fRfDF-~GnGeS~gs------f~~G-n~~~eadDL~sV~q~~s~~n 103 (269)
T KOG4667|consen 32 STEIVVLCHGFRSHKNAIIMKNVAKALEKEGISAFRFDF-SGNGESEGS------FYYG-NYNTEADDLHSVIQYFSNSN 103 (269)
T ss_pred CceEEEEeeccccccchHHHHHHHHHHHhcCceEEEEEe-cCCCCcCCc------cccC-cccchHHHHHHHHHHhccCc
Confidence 34678889987763 235567899999999999999999 999877653 1000 11234589999999997654
Q ss_pred CceEEEEEeeccHHHHHHcc-CCcCceEEEEeccCCcCc-----------------------------------------
Q 026476 117 ITAIGAAGFCWGAKVVVQLG-KREFIQAAVLLHPSFVTV----------------------------------------- 154 (238)
Q Consensus 117 ~~~i~l~G~S~GG~~a~~~a-~~~~i~a~i~~~~~~~~~----------------------------------------- 154 (238)
..--.++|||-||.+++.++ ..+.++-+|.+.|.....
T Consensus 104 r~v~vi~gHSkGg~Vvl~ya~K~~d~~~viNcsGRydl~~~I~eRlg~~~l~~ike~Gfid~~~rkG~y~~rvt~eSlmd 183 (269)
T KOG4667|consen 104 RVVPVILGHSKGGDVVLLYASKYHDIRNVINCSGRYDLKNGINERLGEDYLERIKEQGFIDVGPRKGKYGYRVTEESLMD 183 (269)
T ss_pred eEEEEEEeecCccHHHHHHHHhhcCchheEEcccccchhcchhhhhcccHHHHHHhCCceecCcccCCcCceecHHHHHH
Confidence 33446899999999999988 455677777776653310
Q ss_pred -------ccc--cccCCcEEEEecCCCCCCCHHhHHHHHHHHhhcCCCCceEEEcCCCCeeeee
Q 026476 155 -------DDI--KGVEVPLSILGAEIDRLSPPALVKEFEEALNAKSGVDSFVKIFPKVAHGWTV 209 (238)
Q Consensus 155 -------~~~--~~~~~P~L~i~g~~D~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~H~~~~ 209 (238)
+.. -+.+||+|-+||.+|.++|.+.++++++.+. +..+++++|+.|.|+.
T Consensus 184 rLntd~h~aclkId~~C~VLTvhGs~D~IVPve~AkefAk~i~-----nH~L~iIEgADHnyt~ 242 (269)
T KOG4667|consen 184 RLNTDIHEACLKIDKQCRVLTVHGSEDEIVPVEDAKEFAKIIP-----NHKLEIIEGADHNYTG 242 (269)
T ss_pred HHhchhhhhhcCcCccCceEEEeccCCceeechhHHHHHHhcc-----CCceEEecCCCcCccc
Confidence 001 2357999999999999999999999999883 3568999999999975
No 80
>PRK05855 short chain dehydrogenase; Validated
Probab=99.63 E-value=7.2e-15 Score=130.41 Aligned_cols=107 Identities=15% Similarity=0.107 Sum_probs=73.2
Q ss_pred eEEeeCCeeEEEecCC-CCCeeEEEEeccCCCCCchHHHHHHHHHHCCCEEEeccCCCCCccCCCCCcchHhhHhhcCCC
Q 026476 21 HVEKLGGLNAYVTGSP-DSKLAVLLISDVYGYEAPNLRKLADKVAAAGFYVAVPDFFHGDPYVADGGKPLQEWIKDHGVD 99 (238)
Q Consensus 21 ~~~~~~~~~~~~~~p~-~~~~~vl~~hg~~g~~~~~~~~~a~~l~~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~ 99 (238)
.++..+++..++..-. .+.|+|||+||+.+.. ..+..+...| ..||.|+++|+ +|+|.+...... ..++.+
T Consensus 6 ~~~~~~g~~l~~~~~g~~~~~~ivllHG~~~~~-~~w~~~~~~L-~~~~~Vi~~D~-~G~G~S~~~~~~-----~~~~~~ 77 (582)
T PRK05855 6 TVVSSDGVRLAVYEWGDPDRPTVVLVHGYPDNH-EVWDGVAPLL-ADRFRVVAYDV-RGAGRSSAPKRT-----AAYTLA 77 (582)
T ss_pred EEEeeCCEEEEEEEcCCCCCCeEEEEcCCCchH-HHHHHHHHHh-hcceEEEEecC-CCCCCCCCCCcc-----cccCHH
Confidence 3456667665554322 2468899999987764 5678899988 66899999999 999877532100 022334
Q ss_pred cchhcHHHHHHHHHhcCCceEEEEEeeccHHHHHHccC
Q 026476 100 KGFEEAKPVIQALKSKGITAIGAAGFCWGAKVVVQLGK 137 (238)
Q Consensus 100 ~~~~d~~~~~~~l~~~~~~~i~l~G~S~GG~~a~~~a~ 137 (238)
...+|+..+++.+.. ..++.++||||||.+++.++.
T Consensus 78 ~~a~dl~~~i~~l~~--~~~~~lvGhS~Gg~~a~~~a~ 113 (582)
T PRK05855 78 RLADDFAAVIDAVSP--DRPVHLLAHDWGSIQGWEAVT 113 (582)
T ss_pred HHHHHHHHHHHHhCC--CCcEEEEecChHHHHHHHHHh
Confidence 556677777765521 235999999999999987663
No 81
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=99.62 E-value=1.2e-14 Score=122.59 Aligned_cols=68 Identities=16% Similarity=0.175 Sum_probs=53.2
Q ss_pred cccCCcEEEEecCCCCCCCHHhHHHHHHHHhhcCCCCceEEEcC-CCCeeeeecCCCCCHHHHHHHHHHHHHHHHHHHHh
Q 026476 158 KGVEVPLSILGAEIDRLSPPALVKEFEEALNAKSGVDSFVKIFP-KVAHGWTVRYNVEDETAVKAAEEAHHNLLEWFAKY 236 (238)
Q Consensus 158 ~~~~~P~L~i~g~~D~~~p~~~~~~~~~~~~~~~~~~~~~~~~~-g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~ 236 (238)
.++++|+|+|+|++|.++|++.++.+.+.+. ..+..+++.+++ +++|..... ..++..+.+.+||++.
T Consensus 306 ~~I~~PtLvI~G~~D~~~p~~~~~~la~~i~-~a~~~~~l~~i~~~~GH~~~le----------~p~~~~~~L~~FL~~~ 374 (379)
T PRK00175 306 ARIKARFLVVSFTSDWLFPPARSREIVDALL-AAGADVSYAEIDSPYGHDAFLL----------DDPRYGRLVRAFLERA 374 (379)
T ss_pred hcCCCCEEEEEECCccccCHHHHHHHHHHHH-hcCCCeEEEEeCCCCCchhHhc----------CHHHHHHHHHHHHHhh
Confidence 4578899999999999999999999999993 333344666664 899987653 2357788899999874
No 82
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=99.61 E-value=4.5e-14 Score=120.39 Aligned_cols=193 Identities=19% Similarity=0.211 Sum_probs=135.1
Q ss_pred eeEEEecCC-----CCCeeEEEEeccCCCC-----C--chHHHHHHHHHHCCCEEEeccCCCCCccCCCCCcchHhhHhh
Q 026476 28 LNAYVTGSP-----DSKLAVLLISDVYGYE-----A--PNLRKLADKVAAAGFYVAVPDFFHGDPYVADGGKPLQEWIKD 95 (238)
Q Consensus 28 ~~~~~~~p~-----~~~~~vl~~hg~~g~~-----~--~~~~~~a~~l~~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~ 95 (238)
+.+.++.|. .+.|+++.+.|+.+.. . ..+.+ ...|+++||.|+++|. ||.... +..+..++..
T Consensus 626 lYgmiyKPhn~~pgkkYptvl~VYGGP~VQlVnnsfkgi~ylR-~~~LaslGy~Vv~IDn-RGS~hR---GlkFE~~ik~ 700 (867)
T KOG2281|consen 626 LYGMIYKPHNFQPGKKYPTVLNVYGGPGVQLVNNSFKGIQYLR-FCRLASLGYVVVFIDN-RGSAHR---GLKFESHIKK 700 (867)
T ss_pred EEEEEEccccCCCCCCCceEEEEcCCCceEEeeccccceehhh-hhhhhhcceEEEEEcC-CCcccc---chhhHHHHhh
Confidence 667777775 2458899999987721 1 11122 3458999999999999 776433 3445556555
Q ss_pred cCCCcchhcHHHHHHHHHhc----CCceEEEEEeeccHHHHHH-ccCCcCc-eEEEEeccCCc---------------C-
Q 026476 96 HGVDKGFEEAKPVIQALKSK----GITAIGAAGFCWGAKVVVQ-LGKREFI-QAAVLLHPSFV---------------T- 153 (238)
Q Consensus 96 ~~~~~~~~d~~~~~~~l~~~----~~~~i~l~G~S~GG~~a~~-~a~~~~i-~a~i~~~~~~~---------------~- 153 (238)
..-.-.++|-.+.+++|.++ +.++|++-|||+||++++. ++++|.| +++|+-.|... +
T Consensus 701 kmGqVE~eDQVeglq~Laeq~gfidmdrV~vhGWSYGGYLSlm~L~~~P~IfrvAIAGapVT~W~~YDTgYTERYMg~P~ 780 (867)
T KOG2281|consen 701 KMGQVEVEDQVEGLQMLAEQTGFIDMDRVGVHGWSYGGYLSLMGLAQYPNIFRVAIAGAPVTDWRLYDTGYTERYMGYPD 780 (867)
T ss_pred ccCeeeehhhHHHHHHHHHhcCcccchheeEeccccccHHHHHHhhcCcceeeEEeccCcceeeeeecccchhhhcCCCc
Confidence 44444456666777777666 6789999999999999999 5577865 44444322110 0
Q ss_pred --------------cccccccCCcEEEEecCCCCCCCHHhHHHHHHHHhhcCCCCceEEEcCCCCeeeeecCCCCCHHHH
Q 026476 154 --------------VDDIKGVEVPLSILGAEIDRLSPPALVKEFEEALNAKSGVDSFVKIFPKVAHGWTVRYNVEDETAV 219 (238)
Q Consensus 154 --------------~~~~~~~~~P~L~i~g~~D~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~ 219 (238)
.+.+++-...+|++||--|..|......++.+++ -+.|+++++++||+-.|+.-++..
T Consensus 781 ~nE~gY~agSV~~~VeklpdepnRLlLvHGliDENVHF~Hts~Lvs~l-vkagKpyeL~IfP~ERHsiR~~es------- 852 (867)
T KOG2281|consen 781 NNEHGYGAGSVAGHVEKLPDEPNRLLLVHGLIDENVHFAHTSRLVSAL-VKAGKPYELQIFPNERHSIRNPES------- 852 (867)
T ss_pred cchhcccchhHHHHHhhCCCCCceEEEEecccccchhhhhHHHHHHHH-HhCCCceEEEEccccccccCCCcc-------
Confidence 0114444557999999999999999999999999 567889999999999999965432
Q ss_pred HHHHHHHHHHHHHHHH
Q 026476 220 KAAEEAHHNLLEWFAK 235 (238)
Q Consensus 220 ~~~~~~~~~~~~fl~~ 235 (238)
.+-+-.+++.|+++
T Consensus 853 --~~~yE~rll~FlQ~ 866 (867)
T KOG2281|consen 853 --GIYYEARLLHFLQE 866 (867)
T ss_pred --chhHHHHHHHHHhh
Confidence 23344568888876
No 83
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.61 E-value=8.6e-14 Score=111.09 Aligned_cols=172 Identities=16% Similarity=0.110 Sum_probs=117.4
Q ss_pred CCeeEEEecCCCC--CeeEEEEeccCCCC---CchHHHHHHHHHHCCCEEEeccCCCCCccCCCCCcchHhhHhhcCCCc
Q 026476 26 GGLNAYVTGSPDS--KLAVLLISDVYGYE---APNLRKLADKVAAAGFYVAVPDFFHGDPYVADGGKPLQEWIKDHGVDK 100 (238)
Q Consensus 26 ~~~~~~~~~p~~~--~~~vl~~hg~~g~~---~~~~~~~a~~l~~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~ 100 (238)
+.+.+++..|.+. .++||++||+.+.. ...+..+++.|+++||.|+++|+ +|+|.+.+... ......
T Consensus 10 g~~~~~~~~p~~~~~~~~VlllHG~g~~~~~~~~~~~~la~~La~~Gy~Vl~~Dl-~G~G~S~g~~~-------~~~~~~ 81 (266)
T TIGR03101 10 GFRFCLYHPPVAVGPRGVVIYLPPFAEEMNKSRRMVALQARAFAAGGFGVLQIDL-YGCGDSAGDFA-------AARWDV 81 (266)
T ss_pred CcEEEEEecCCCCCCceEEEEECCCcccccchhHHHHHHHHHHHHCCCEEEEECC-CCCCCCCCccc-------cCCHHH
Confidence 4466766766543 46788999865421 13345678999999999999999 89987654211 112234
Q ss_pred chhcHHHHHHHHHhcCCceEEEEEeeccHHHHHHcc-CC-cCceEEEEeccCCcC---------------------c---
Q 026476 101 GFEEAKPVIQALKSKGITAIGAAGFCWGAKVVVQLG-KR-EFIQAAVLLHPSFVT---------------------V--- 154 (238)
Q Consensus 101 ~~~d~~~~~~~l~~~~~~~i~l~G~S~GG~~a~~~a-~~-~~i~a~i~~~~~~~~---------------------~--- 154 (238)
..+|+..+++++++.+..+|.++||||||.+++.++ .. ..++++|++.+.... .
T Consensus 82 ~~~Dv~~ai~~L~~~~~~~v~LvG~SmGG~vAl~~A~~~p~~v~~lVL~~P~~~g~~~l~~~lrl~~~~~~~~~~~~~~~ 161 (266)
T TIGR03101 82 WKEDVAAAYRWLIEQGHPPVTLWGLRLGALLALDAANPLAAKCNRLVLWQPVVSGKQQLQQFLRLRLVARRLGGESAEAS 161 (266)
T ss_pred HHHHHHHHHHHHHhcCCCCEEEEEECHHHHHHHHHHHhCccccceEEEeccccchHHHHHHHHHHHHHHHhccccccccc
Confidence 668999999999888778999999999999999877 44 367778877653210 0
Q ss_pred ------------------------------ccccc---cCCcEEEEecCC--CCCCCHHhHHHHHHHHhhcCCCCceEEE
Q 026476 155 ------------------------------DDIKG---VEVPLSILGAEI--DRLSPPALVKEFEEALNAKSGVDSFVKI 199 (238)
Q Consensus 155 ------------------------------~~~~~---~~~P~L~i~g~~--D~~~p~~~~~~~~~~~~~~~~~~~~~~~ 199 (238)
-++.+ ...++|++.-.. |+- ......++.+.+ .+.|+.++...
T Consensus 162 ~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~-~~~g~~v~~~~ 239 (266)
T TIGR03101 162 NSLRERLLAGEDVEIAGYELAPALASDLDQRQLAPAVPKNCPVHWFEVRPEEGAT-LSPVFSRLGEQW-VQSGVEVTVDL 239 (266)
T ss_pred hhHHhhccCCCeEEEeceecCHHHHHHHHhcccCCCCCCCCceEEEEeccccCCC-CCHHHHHHHHHH-HHcCCeEeeee
Confidence 00111 144677776643 332 334566777778 56899999999
Q ss_pred cCCCCeeeee
Q 026476 200 FPKVAHGWTV 209 (238)
Q Consensus 200 ~~g~~H~~~~ 209 (238)
++| . .|..
T Consensus 240 ~~~-~-~~~~ 247 (266)
T TIGR03101 240 VPG-P-AFWQ 247 (266)
T ss_pred cCC-c-hhhc
Confidence 997 4 5544
No 84
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=99.60 E-value=3.6e-14 Score=128.01 Aligned_cols=185 Identities=12% Similarity=0.120 Sum_probs=131.0
Q ss_pred CeeEEEEeccCCCC---CchHHHHHHH-HHHCCCEEEeccCCCCCccCCCCCcchHhhHhhcCCCcchhcHHHHHHHHHh
Q 026476 39 KLAVLLISDVYGYE---APNLRKLADK-VAAAGFYVAVPDFFHGDPYVADGGKPLQEWIKDHGVDKGFEEAKPVIQALKS 114 (238)
Q Consensus 39 ~~~vl~~hg~~g~~---~~~~~~~a~~-l~~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~ 114 (238)
-|.++..||+.++. ....-.+... +...|++|+.+|. ||.+... ..+.....+.--...++|...+++++.+
T Consensus 526 yPllv~~yGGP~sq~v~~~~~~~~~~~~~s~~g~~v~~vd~-RGs~~~G---~~~~~~~~~~lG~~ev~D~~~~~~~~~~ 601 (755)
T KOG2100|consen 526 YPLLVVVYGGPGSQSVTSKFSVDWNEVVVSSRGFAVLQVDG-RGSGGYG---WDFRSALPRNLGDVEVKDQIEAVKKVLK 601 (755)
T ss_pred CCEEEEecCCCCcceeeeeEEecHHHHhhccCCeEEEEEcC-CCcCCcc---hhHHHHhhhhcCCcchHHHHHHHHHHHh
Confidence 46777888887621 1222344444 4456999999999 8875442 2222222222223456777777777766
Q ss_pred c---CCceEEEEEeeccHHHHHHcc-CCc--CceEEEEeccCCcC---------------------------cccccccC
Q 026476 115 K---GITAIGAAGFCWGAKVVVQLG-KRE--FIQAAVLLHPSFVT---------------------------VDDIKGVE 161 (238)
Q Consensus 115 ~---~~~~i~l~G~S~GG~~a~~~a-~~~--~i~a~i~~~~~~~~---------------------------~~~~~~~~ 161 (238)
. |.+||+++|+|.||.+++.+. ..+ -++++++..|...- ...+..++
T Consensus 602 ~~~iD~~ri~i~GwSyGGy~t~~~l~~~~~~~fkcgvavaPVtd~~~yds~~terymg~p~~~~~~y~e~~~~~~~~~~~ 681 (755)
T KOG2100|consen 602 LPFIDRSRVAIWGWSYGGYLTLKLLESDPGDVFKCGVAVAPVTDWLYYDSTYTERYMGLPSENDKGYEESSVSSPANNIK 681 (755)
T ss_pred cccccHHHeEEeccChHHHHHHHHhhhCcCceEEEEEEecceeeeeeecccccHhhcCCCccccchhhhccccchhhhhc
Confidence 5 788999999999999999976 443 46777887765321 01133455
Q ss_pred CcE-EEEecCCCCCCCHHhHHHHHHHHhhcCCCCceEEEcCCCCeeeeecCCCCCHHHHHHHHHHHHHHHHHHHHhc
Q 026476 162 VPL-SILGAEIDRLSPPALVKEFEEALNAKSGVDSFVKIFPKVAHGWTVRYNVEDETAVKAAEEAHHNLLEWFAKYV 237 (238)
Q Consensus 162 ~P~-L~i~g~~D~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~ 237 (238)
.|. |++||+.|..++.++..++.++| ...|+++.+.+||+..|++..... ....+..+..||++.+
T Consensus 682 ~~~~LliHGt~DdnVh~q~s~~~~~aL-~~~gv~~~~~vypde~H~is~~~~---------~~~~~~~~~~~~~~~~ 748 (755)
T KOG2100|consen 682 TPKLLLIHGTEDDNVHFQQSAILIKAL-QNAGVPFRLLVYPDENHGISYVEV---------ISHLYEKLDRFLRDCF 748 (755)
T ss_pred cCCEEEEEcCCcCCcCHHHHHHHHHHH-HHCCCceEEEEeCCCCcccccccc---------hHHHHHHHHHHHHHHc
Confidence 555 99999999999999999999999 578999999999999999986532 3578899999998654
No 85
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.59 E-value=3.7e-14 Score=137.62 Aligned_cols=181 Identities=12% Similarity=0.143 Sum_probs=119.5
Q ss_pred CeeEEEEeccCCCCCchHHHHHHHHHHCCCEEEeccCCCCCccCCCCCcchHhhH-hhcCCCcchhcHHHHHHHHHhcCC
Q 026476 39 KLAVLLISDVYGYEAPNLRKLADKVAAAGFYVAVPDFFHGDPYVADGGKPLQEWI-KDHGVDKGFEEAKPVIQALKSKGI 117 (238)
Q Consensus 39 ~~~vl~~hg~~g~~~~~~~~~a~~l~~~G~~v~~~d~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~d~~~~~~~l~~~~~ 117 (238)
.++||++||+.++. ..+..++..|.+ +|.|+++|+ +|+|.+........... .....+...+++.++ +.+.+.
T Consensus 1371 ~~~vVllHG~~~s~-~~w~~~~~~L~~-~~rVi~~Dl-~G~G~S~~~~~~~~~~~~~~~si~~~a~~l~~l---l~~l~~ 1444 (1655)
T PLN02980 1371 GSVVLFLHGFLGTG-EDWIPIMKAISG-SARCISIDL-PGHGGSKIQNHAKETQTEPTLSVELVADLLYKL---IEHITP 1444 (1655)
T ss_pred CCeEEEECCCCCCH-HHHHHHHHHHhC-CCEEEEEcC-CCCCCCCCccccccccccccCCHHHHHHHHHHH---HHHhCC
Confidence 57899999988875 567888888865 599999999 99987643210000000 011112223333333 344466
Q ss_pred ceEEEEEeeccHHHHHHcc-CCc-CceEEEEeccCCc----------------------------------C--------
Q 026476 118 TAIGAAGFCWGAKVVVQLG-KRE-FIQAAVLLHPSFV----------------------------------T-------- 153 (238)
Q Consensus 118 ~~i~l~G~S~GG~~a~~~a-~~~-~i~a~i~~~~~~~----------------------------------~-------- 153 (238)
+++.++||||||.+++.++ ..| .+++.|++.+... .
T Consensus 1445 ~~v~LvGhSmGG~iAl~~A~~~P~~V~~lVlis~~p~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~ 1524 (1655)
T PLN02980 1445 GKVTLVGYSMGARIALYMALRFSDKIEGAVIISGSPGLKDEVARKIRSAKDDSRARMLIDHGLEIFLENWYSGELWKSLR 1524 (1655)
T ss_pred CCEEEEEECHHHHHHHHHHHhChHhhCEEEEECCCCccCchHHHHHHhhhhhHHHHHHHhhhHHHHHHHhccHHHhhhhc
Confidence 7999999999999999988 444 6777776542100 0
Q ss_pred ------------------------------------cccccccCCcEEEEecCCCCCCCHHhHHHHHHHHhhc-C-----
Q 026476 154 ------------------------------------VDDIKGVEVPLSILGAEIDRLSPPALVKEFEEALNAK-S----- 191 (238)
Q Consensus 154 ------------------------------------~~~~~~~~~P~L~i~g~~D~~~p~~~~~~~~~~~~~~-~----- 191 (238)
.+.+.++++|+|+|+|++|.+++ +...++.+.+... .
T Consensus 1525 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dl~~~L~~I~~PtLlI~Ge~D~~~~-~~a~~~~~~i~~a~~~~~~~ 1603 (1655)
T PLN02980 1525 NHPHFNKIVASRLLHKDVPSLAKLLSDLSIGRQPSLWEDLKQCDTPLLLVVGEKDVKFK-QIAQKMYREIGKSKESGNDK 1603 (1655)
T ss_pred cCHHHHHHHHHHHhcCCHHHHHHHHHHhhhcccchHHHHHhhCCCCEEEEEECCCCccH-HHHHHHHHHccccccccccc
Confidence 01145678899999999999875 5666777766321 0
Q ss_pred -CCCceEEEcCCCCeeeeecCCCCCHHHHHHHHHHHHHHHHHHHHh
Q 026476 192 -GVDSFVKIFPKVAHGWTVRYNVEDETAVKAAEEAHHNLLEWFAKY 236 (238)
Q Consensus 192 -~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~ 236 (238)
....+++++++++|..+.. ..++..+.+.+||++.
T Consensus 1604 ~~~~a~lvvI~~aGH~~~lE----------~Pe~f~~~I~~FL~~~ 1639 (1655)
T PLN02980 1604 GKEIIEIVEIPNCGHAVHLE----------NPLPVIRALRKFLTRL 1639 (1655)
T ss_pred cccceEEEEECCCCCchHHH----------CHHHHHHHHHHHHHhc
Confidence 0125799999999988763 2357888899999864
No 86
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=99.58 E-value=1.1e-14 Score=112.97 Aligned_cols=148 Identities=24% Similarity=0.297 Sum_probs=108.1
Q ss_pred EEEEeccC---CCCCchHHHHHHHHHH-CCCEEEeccCCCCCccCCCCCcchHhhHhhcCCCcchhcHHHHHHHHHhc--
Q 026476 42 VLLISDVY---GYEAPNLRKLADKVAA-AGFYVAVPDFFHGDPYVADGGKPLQEWIKDHGVDKGFEEAKPVIQALKSK-- 115 (238)
Q Consensus 42 vl~~hg~~---g~~~~~~~~~a~~l~~-~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~-- 115 (238)
||++||+. |.. .....++..+++ .|+.|+++|| |-.+ +......++|+.++++++.+.
T Consensus 1 v~~~HGGg~~~g~~-~~~~~~~~~la~~~g~~v~~~~Y-rl~p--------------~~~~p~~~~D~~~a~~~l~~~~~ 64 (211)
T PF07859_consen 1 VVYIHGGGWVMGSK-ESHWPFAARLAAERGFVVVSIDY-RLAP--------------EAPFPAALEDVKAAYRWLLKNAD 64 (211)
T ss_dssp EEEE--STTTSCGT-TTHHHHHHHHHHHHTSEEEEEE----TT--------------TSSTTHHHHHHHHHHHHHHHTHH
T ss_pred CEEECCcccccCCh-HHHHHHHHHHHhhccEEEEEeec-cccc--------------cccccccccccccceeeeccccc
Confidence 68999864 332 445778888886 7999999999 3221 334466889999999999775
Q ss_pred ----CCceEEEEEeeccHHHHHHccC---C---cCceEEEEeccCCcC--c------------c----------------
Q 026476 116 ----GITAIGAAGFCWGAKVVVQLGK---R---EFIQAAVLLHPSFVT--V------------D---------------- 155 (238)
Q Consensus 116 ----~~~~i~l~G~S~GG~~a~~~a~---~---~~i~a~i~~~~~~~~--~------------~---------------- 155 (238)
+.++|+++|+|.||.+++.++. + +.++++++++|.... . +
T Consensus 65 ~~~~d~~~i~l~G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (211)
T PF07859_consen 65 KLGIDPERIVLIGDSAGGHLALSLALRARDRGLPKPKGIILISPWTDLQDFDGPSYDDSNENKDDPFLPAPKIDWFWKLY 144 (211)
T ss_dssp HHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTTCHESEEEEESCHSSTSTSSCHHHHHHHHHSTTSSSBHHHHHHHHHHH
T ss_pred cccccccceEEeecccccchhhhhhhhhhhhcccchhhhhcccccccchhcccccccccccccccccccccccccccccc
Confidence 4679999999999999999873 1 358999998875311 0 0
Q ss_pred ---------ccc-----cc--CCcEEEEecCCCCCCCHHhHHHHHHHHhhcCCCCceEEEcCCCCeeee
Q 026476 156 ---------DIK-----GV--EVPLSILGAEIDRLSPPALVKEFEEALNAKSGVDSFVKIFPKVAHGWT 208 (238)
Q Consensus 156 ---------~~~-----~~--~~P~L~i~g~~D~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~H~~~ 208 (238)
.+. .. .+|+++++|+.|.++ ++...+.+.+ ++.|+++++++++|..|+|.
T Consensus 145 ~~~~~~~~~~~sp~~~~~~~~~Pp~~i~~g~~D~l~--~~~~~~~~~L-~~~gv~v~~~~~~g~~H~f~ 210 (211)
T PF07859_consen 145 LPGSDRDDPLASPLNASDLKGLPPTLIIHGEDDVLV--DDSLRFAEKL-KKAGVDVELHVYPGMPHGFF 210 (211)
T ss_dssp HSTGGTTSTTTSGGGSSCCTTCHEEEEEEETTSTTH--HHHHHHHHHH-HHTT-EEEEEEETTEETTGG
T ss_pred cccccccccccccccccccccCCCeeeeccccccch--HHHHHHHHHH-HHCCCCEEEEEECCCeEEee
Confidence 011 11 349999999999864 5778999999 56889999999999999984
No 87
>PRK07868 acyl-CoA synthetase; Validated
Probab=99.58 E-value=1.4e-13 Score=129.05 Aligned_cols=191 Identities=17% Similarity=0.192 Sum_probs=127.3
Q ss_pred eeCCeeEEEecCCC-------CCeeEEEEeccCCCCCchHH-----HHHHHHHHCCCEEEeccCCCCCccCCCCCcchHh
Q 026476 24 KLGGLNAYVTGSPD-------SKLAVLLISDVYGYEAPNLR-----KLADKVAAAGFYVAVPDFFHGDPYVADGGKPLQE 91 (238)
Q Consensus 24 ~~~~~~~~~~~p~~-------~~~~vl~~hg~~g~~~~~~~-----~~a~~l~~~G~~v~~~d~~~g~~~~~~~~~~~~~ 91 (238)
+.+.+..+.+.|.. .+++|||+||+.... ..++ .+...|.++||.|+++|+ |.+..+.. .
T Consensus 45 ~~~~~~l~~y~~~~~~~~~~~~~~plllvhg~~~~~-~~~d~~~~~s~v~~L~~~g~~v~~~d~--G~~~~~~~-----~ 116 (994)
T PRK07868 45 SVPMYRLRRYFPPDNRPGQPPVGPPVLMVHPMMMSA-DMWDVTRDDGAVGILHRAGLDPWVIDF--GSPDKVEG-----G 116 (994)
T ss_pred EcCcEEEEEeCCCCccccccCCCCcEEEECCCCCCc-cceecCCcccHHHHHHHCCCEEEEEcC--CCCChhHc-----C
Confidence 55668888887753 347999999976643 2333 358899999999999995 43221110 0
Q ss_pred hHhhcCCCcchhcHHHHHHHHHhcCCceEEEEEeeccHHHHHHccC-C-c-CceEEEEeccCC----------------c
Q 026476 92 WIKDHGVDKGFEEAKPVIQALKSKGITAIGAAGFCWGAKVVVQLGK-R-E-FIQAAVLLHPSF----------------V 152 (238)
Q Consensus 92 ~~~~~~~~~~~~d~~~~~~~l~~~~~~~i~l~G~S~GG~~a~~~a~-~-~-~i~a~i~~~~~~----------------~ 152 (238)
. .......+..+.++++.+++...+++.++||||||.+++.++. + + +++..+++.... .
T Consensus 117 ~--~~~l~~~i~~l~~~l~~v~~~~~~~v~lvG~s~GG~~a~~~aa~~~~~~v~~lvl~~~~~d~~~~~~~~~~~~~~~~ 194 (994)
T PRK07868 117 M--ERNLADHVVALSEAIDTVKDVTGRDVHLVGYSQGGMFCYQAAAYRRSKDIASIVTFGSPVDTLAALPMGIPAGLAAA 194 (994)
T ss_pred c--cCCHHHHHHHHHHHHHHHHHhhCCceEEEEEChhHHHHHHHHHhcCCCccceEEEEecccccCCCCcccchhhhhhc
Confidence 0 1122223344555556555555568999999999999988663 3 3 577666521110 0
Q ss_pred --------------------------------------------------C----------c------------------
Q 026476 153 --------------------------------------------------T----------V------------------ 154 (238)
Q Consensus 153 --------------------------------------------------~----------~------------------ 154 (238)
+ .
T Consensus 195 ~~~~~~~~~~~~~~~p~~~~~~~~~~l~p~~~~~~~~~~~~~l~~~~~~~~~e~~~~~~~~~~w~~~~g~~~~~~~~~~~ 274 (994)
T PRK07868 195 AADFMADHVFNRLDIPGWMARTGFQMLDPVKTAKARVDFLRQLHDREALLPREQQRRFLESEGWIAWSGPAISELLKQFI 274 (994)
T ss_pred ccccchhhhhhcCCCCHHHHHHHHHhcChhHHHHHHHHHHHhcCchhhhccchhhHhHHHHhhccccchHHHHHHHHHHH
Confidence 0 0
Q ss_pred ----------------ccccccCCcEEEEecCCCCCCCHHhHHHHHHHHhhcCCCCceE-EEcCCCCeeeeecCCCCCHH
Q 026476 155 ----------------DDIKGVEVPLSILGAEIDRLSPPALVKEFEEALNAKSGVDSFV-KIFPKVAHGWTVRYNVEDET 217 (238)
Q Consensus 155 ----------------~~~~~~~~P~L~i~g~~D~~~p~~~~~~~~~~~~~~~~~~~~~-~~~~g~~H~~~~~~~~~~~~ 217 (238)
.++.++++|+|+|+|++|.++|++.++.+.+.+ .+ .++ .++++++|.-..-...
T Consensus 275 ~~n~~~~g~~~~~~~~~~L~~i~~P~L~i~G~~D~ivp~~~~~~l~~~i---~~--a~~~~~~~~~GH~g~~~g~~---- 345 (994)
T PRK07868 275 AHNRMMTGGFAINGQMVTLADITCPVLAFVGEVDDIGQPASVRGIRRAA---PN--AEVYESLIRAGHFGLVVGSR---- 345 (994)
T ss_pred HhCcccCceEEECCEEcchhhCCCCEEEEEeCCCCCCCHHHHHHHHHhC---CC--CeEEEEeCCCCCEeeeechh----
Confidence 014577899999999999999999999998876 22 334 4567789976543332
Q ss_pred HHHHHHHHHHHHHHHHHHh
Q 026476 218 AVKAAEEAHHNLLEWFAKY 236 (238)
Q Consensus 218 ~~~~~~~~~~~~~~fl~~~ 236 (238)
..++.|..+.+||+++
T Consensus 346 ---a~~~~wp~i~~wl~~~ 361 (994)
T PRK07868 346 ---AAQQTWPTVADWVKWL 361 (994)
T ss_pred ---hhhhhChHHHHHHHHh
Confidence 5688999999999975
No 88
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=99.58 E-value=5.8e-14 Score=117.61 Aligned_cols=197 Identities=17% Similarity=0.254 Sum_probs=107.3
Q ss_pred CCCeeEEEEeccCCCCCchHHHHHHHHHHCCCEEEeccCCCCCcc-CC--CCCc--chH----h-----hHh--------
Q 026476 37 DSKLAVLLISDVYGYEAPNLRKLADKVAAAGFYVAVPDFFHGDPY-VA--DGGK--PLQ----E-----WIK-------- 94 (238)
Q Consensus 37 ~~~~~vl~~hg~~g~~~~~~~~~a~~l~~~G~~v~~~d~~~g~~~-~~--~~~~--~~~----~-----~~~-------- 94 (238)
++-|.|||=||.+|.+ ..+..++..||++||+|+++|+..|... +. .+.. ... . |+.
T Consensus 98 ~~~PvvIFSHGlgg~R-~~yS~~~~eLAS~GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (379)
T PF03403_consen 98 GKFPVVIFSHGLGGSR-TSYSAICGELASHGYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRDFDPEE 176 (379)
T ss_dssp S-EEEEEEE--TT--T-TTTHHHHHHHHHTT-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE-----GGG
T ss_pred CCCCEEEEeCCCCcch-hhHHHHHHHHHhCCeEEEEeccCCCceeEEEeccCCCccccccccccccccceeccccccchh
Confidence 3457888888888886 5789999999999999999998434311 10 1100 000 0 000
Q ss_pred -----hcCCCcchhcHHHHHHHHHhc-----------------------CCceEEEEEeeccHHHHHHcc-CCcCceEEE
Q 026476 95 -----DHGVDKGFEEAKPVIQALKSK-----------------------GITAIGAAGFCWGAKVVVQLG-KREFIQAAV 145 (238)
Q Consensus 95 -----~~~~~~~~~d~~~~~~~l~~~-----------------------~~~~i~l~G~S~GG~~a~~~a-~~~~i~a~i 145 (238)
..-......++..+++.+++. +.++|+++|||+||.+++.++ ...+++++|
T Consensus 177 ~~~~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGGATa~~~l~~d~r~~~~I 256 (379)
T PF03403_consen 177 EFELRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGGATALQALRQDTRFKAGI 256 (379)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHHHHHHHHHHH-TT--EEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCchHHHHHHHHhhccCcceEE
Confidence 000123345566677766531 245899999999999999976 557899999
Q ss_pred EeccCCcCc--ccccccCCcEEEEecCCCCCCCHHhHHHHHHHHhhcCCCCceEEEcCCCCeeeeecCCCC---------
Q 026476 146 LLHPSFVTV--DDIKGVEVPLSILGAEIDRLSPPALVKEFEEALNAKSGVDSFVKIFPKVAHGWTVRYNVE--------- 214 (238)
Q Consensus 146 ~~~~~~~~~--~~~~~~~~P~L~i~g~~D~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~H~~~~~~~~~--------- 214 (238)
++.+...+. +....++.|+|+|+++. +........+.+.. . .+....+..+.|..|.-..+...-
T Consensus 257 ~LD~W~~Pl~~~~~~~i~~P~L~InSe~--f~~~~~~~~~~~~~-~-~~~~~~~~ti~gt~H~s~sD~~ll~P~~l~~~~ 332 (379)
T PF03403_consen 257 LLDPWMFPLGDEIYSKIPQPLLFINSES--FQWWENIFRMKKVI-S-NNKESRMLTIKGTAHLSFSDFPLLSPWLLGKFL 332 (379)
T ss_dssp EES---TTS-GGGGGG--S-EEEEEETT--T--HHHHHHHHTT----TTS-EEEEEETT--GGGGSGGGGTS-HHHHHHT
T ss_pred EeCCcccCCCcccccCCCCCEEEEECcc--cCChhhHHHHHHHh-c-cCCCcEEEEECCCcCCCcchhhhhhHHHHHHHh
Confidence 999987743 33567889999999854 33344444444433 2 233566778889999543321111
Q ss_pred ----CHHHHHHHHHHHHHHHHHHHHhcC
Q 026476 215 ----DETAVKAAEEAHHNLLEWFAKYVK 238 (238)
Q Consensus 215 ----~~~~~~~~~~~~~~~~~fl~~~~~ 238 (238)
........+...+.+++||+++|+
T Consensus 333 ~~~g~~dp~~a~~i~~~~~l~FL~~~L~ 360 (379)
T PF03403_consen 333 GLKGSIDPERALRINNRASLAFLRRHLG 360 (379)
T ss_dssp TSS-SS-HHHHHHHHHHHHHHHHHHHHT
T ss_pred ccccCcCHHHHHHHHHHHHHHHHHHhcC
Confidence 112234566777889999999864
No 89
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=99.55 E-value=1.5e-13 Score=124.33 Aligned_cols=161 Identities=16% Similarity=0.179 Sum_probs=119.3
Q ss_pred HHHHHHHHCCCEEEeccCCCCCccCCCCCcchHhhHhhcCCCcchhcHHHHHHHHHhc-----------------CCceE
Q 026476 58 KLADKVAAAGFYVAVPDFFHGDPYVADGGKPLQEWIKDHGVDKGFEEAKPVIQALKSK-----------------GITAI 120 (238)
Q Consensus 58 ~~a~~l~~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~-----------------~~~~i 120 (238)
.+.++|+++||+|+..|. ||.+.|.+... .......+|+.++|+|+..+ ...+|
T Consensus 270 ~~~~~~~~rGYaVV~~D~-RGtg~SeG~~~--------~~~~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkV 340 (767)
T PRK05371 270 SLNDYFLPRGFAVVYVSG-IGTRGSDGCPT--------TGDYQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKV 340 (767)
T ss_pred hHHHHHHhCCeEEEEEcC-CCCCCCCCcCc--------cCCHHHHHHHHHHHHHHhhCCccccccccccccccCCCCCee
Confidence 577899999999999999 99987765311 11133568999999999843 14699
Q ss_pred EEEEeeccHHHHHHcc--CCcCceEEEEeccCC-----------------c-------------C---------------
Q 026476 121 GAAGFCWGAKVVVQLG--KREFIQAAVLLHPSF-----------------V-------------T--------------- 153 (238)
Q Consensus 121 ~l~G~S~GG~~a~~~a--~~~~i~a~i~~~~~~-----------------~-------------~--------------- 153 (238)
+++|.|+||.+++.+| ..+.++++|...+.. . .
T Consensus 341 Gm~G~SY~G~~~~~aAa~~pp~LkAIVp~a~is~~yd~yr~~G~~~~~~g~~ged~d~l~~~~~~r~~~~~~~~~~~~~~ 420 (767)
T PRK05371 341 AMTGKSYLGTLPNAVATTGVEGLETIIPEAAISSWYDYYRENGLVRAPGGYQGEDLDVLAELTYSRNLLAGDYLRHNEAC 420 (767)
T ss_pred EEEEEcHHHHHHHHHHhhCCCcceEEEeeCCCCcHHHHhhcCCceeccCCcCCcchhhHHHHhhhcccCcchhhcchHHH
Confidence 9999999999999876 346788888753210 0 0
Q ss_pred ---------------------------cccccccCCcEEEEecCCCCCCCHHhHHHHHHHHhhcCCCCceEEEcCCCCee
Q 026476 154 ---------------------------VDDIKGVEVPLSILGAEIDRLSPPALVKEFEEALNAKSGVDSFVKIFPKVAHG 206 (238)
Q Consensus 154 ---------------------------~~~~~~~~~P~L~i~g~~D~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~H~ 206 (238)
...+.++++|+|++||..|..++++++.+++++++ ..+.+.++.+.++ +|.
T Consensus 421 ~~~~~~~~~~~~~~~~~y~~fW~~rn~~~~~~kIkvPvLlIhGw~D~~V~~~~s~~ly~aL~-~~g~pkkL~l~~g-~H~ 498 (767)
T PRK05371 421 EKLLAELTAAQDRKTGDYNDFWDDRNYLKDADKIKASVLVVHGLNDWNVKPKQVYQWWDALP-ENGVPKKLFLHQG-GHV 498 (767)
T ss_pred HHHHhhhhhhhhhcCCCccHHHHhCCHhhHhhCCCCCEEEEeeCCCCCCChHHHHHHHHHHH-hcCCCeEEEEeCC-Ccc
Confidence 01135688999999999999999999999999994 4466778877775 786
Q ss_pred eeecCCCCCHHHHHHHHHHHHHHHHHHHHhcC
Q 026476 207 WTVRYNVEDETAVKAAEEAHHNLLEWFAKYVK 238 (238)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~ 238 (238)
..... ...+..+.+.+||.++|+
T Consensus 499 ~~~~~---------~~~d~~e~~~~Wfd~~Lk 521 (767)
T PRK05371 499 YPNNW---------QSIDFRDTMNAWFTHKLL 521 (767)
T ss_pred CCCch---------hHHHHHHHHHHHHHhccc
Confidence 54321 235677889999998874
No 90
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=99.54 E-value=1.3e-14 Score=118.52 Aligned_cols=176 Identities=21% Similarity=0.167 Sum_probs=97.0
Q ss_pred eeEEEecCCC---CCeeEEEEeccCCCC-----------------CchHHHHHHHHHHCCCEEEeccCCCCCccCCCC--
Q 026476 28 LNAYVTGSPD---SKLAVLLISDVYGYE-----------------APNLRKLADKVAAAGFYVAVPDFFHGDPYVADG-- 85 (238)
Q Consensus 28 ~~~~~~~p~~---~~~~vl~~hg~~g~~-----------------~~~~~~~a~~l~~~G~~v~~~d~~~g~~~~~~~-- 85 (238)
+++|+..|++ +.|+||++||-.+.. ...-..++..|+++||+|+++|. .|.|.....
T Consensus 101 vpaylLvPd~~~~p~PAVL~lHgHg~~Ke~~~g~~gv~~~~~~~~~~~~~~~g~~LAk~GYVvla~D~-~g~GER~~~e~ 179 (390)
T PF12715_consen 101 VPAYLLVPDGAKGPFPAVLCLHGHGGGKEKMAGEDGVSPDLKDDYDDPKQDYGDQLAKRGYVVLAPDA-LGFGERGDMEG 179 (390)
T ss_dssp EEEEEEEETT--S-EEEEEEE--TT--HHHHCT---SSGCG--STTSTTT-HHHHHHTTTSEEEEE---TTSGGG-SSCC
T ss_pred EEEEEEecCCCCCCCCEEEEeCCCCCCcccccCCcccccccchhhccccccHHHHHHhCCCEEEEEcc-ccccccccccc
Confidence 7899998875 348899999743311 00113579999999999999999 555432211
Q ss_pred -Cc----c---hHhhHhhcCC---CcchhcHHHHHHHHHhc---CCceEEEEEeeccHHHHHHcc-CCcCceEEEEeccC
Q 026476 86 -GK----P---LQEWIKDHGV---DKGFEEAKPVIQALKSK---GITAIGAAGFCWGAKVVVQLG-KREFIQAAVLLHPS 150 (238)
Q Consensus 86 -~~----~---~~~~~~~~~~---~~~~~d~~~~~~~l~~~---~~~~i~l~G~S~GG~~a~~~a-~~~~i~a~i~~~~~ 150 (238)
.. + ...+....+. -...-|...++|+|.++ +.+||+++||||||..++.++ ..++|+++|+..-.
T Consensus 180 ~~~~~~~~~~~la~~~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~GfSmGg~~a~~LaALDdRIka~v~~~~l 259 (390)
T PF12715_consen 180 AAQGSNYDCQALARNLLMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMGFSMGGYRAWWLAALDDRIKATVANGYL 259 (390)
T ss_dssp CTTTTS--HHHHHHHHHHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEEEGGGHHHHHHHHHH-TT--EEEEES-B
T ss_pred cccccchhHHHHHHHHHHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEeecccHHHHHHHHHcchhhHhHhhhhhh
Confidence 00 1 1111111111 11223455588999887 578999999999999999987 67799888764211
Q ss_pred C--------c------------------Cc--------ccccc--cCCcEEEEecCCCCCCCHHhHHHHHHHHhhcCCCC
Q 026476 151 F--------V------------------TV--------DDIKG--VEVPLSILGAEIDRLSPPALVKEFEEALNAKSGVD 194 (238)
Q Consensus 151 ~--------~------------------~~--------~~~~~--~~~P~L~i~g~~D~~~p~~~~~~~~~~~~~~~~~~ 194 (238)
. . -+ .++.. ...|+|++.|.+|..+|. +++.++.. . ...+
T Consensus 260 ~~~~~~~~~mt~~~~~~~~~~~~~~~~~iPgl~r~~D~PdIasliAPRPll~~nG~~Dklf~i--V~~AY~~~-~-~p~n 335 (390)
T PF12715_consen 260 CTTQERALLMTMPNNNGLRGFPNCICNYIPGLWRYFDFPDIASLIAPRPLLFENGGKDKLFPI--VRRAYAIM-G-APDN 335 (390)
T ss_dssp --HHHHHHHB----TTS----SS-GGG--TTCCCC--HHHHHHTTTTS-EEESS-B-HHHHHH--HHHHHHHT-T--GGG
T ss_pred hccchhhHhhccccccccCcCcchhhhhCccHHhhCccHHHHHHhCCCcchhhcCCcccccHH--HHHHHHhc-C-CCcc
Confidence 0 0 00 00111 245999999999987754 77777766 2 3348
Q ss_pred ceEEEcCCCCeeeee
Q 026476 195 SFVKIFPKVAHGWTV 209 (238)
Q Consensus 195 ~~~~~~~g~~H~~~~ 209 (238)
++++.||+ .|....
T Consensus 336 ~~~~~~p~-~~~~~~ 349 (390)
T PF12715_consen 336 FQIHHYPK-FADPEI 349 (390)
T ss_dssp EEE---GG-G-SGGG
T ss_pred eEEeeccc-ccChhh
Confidence 88889995 555543
No 91
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.54 E-value=2.3e-13 Score=108.75 Aligned_cols=175 Identities=15% Similarity=0.184 Sum_probs=129.1
Q ss_pred CCeeEEEEeccCCCCCchHHHHHHHHHHC-CCEEEeccCCCCCccCCCCCcchHhhHhhcCCCcchhcHHHHHHHHHhc-
Q 026476 38 SKLAVLLISDVYGYEAPNLRKLADKVAAA-GFYVAVPDFFHGDPYVADGGKPLQEWIKDHGVDKGFEEAKPVIQALKSK- 115 (238)
Q Consensus 38 ~~~~vl~~hg~~g~~~~~~~~~a~~l~~~-G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~- 115 (238)
..|+++++||..|+. ..++.++..|++. |-.++++|. |.+|.++.. .........+|+..+++..+..
T Consensus 51 ~~Pp~i~lHGl~GS~-~Nw~sv~k~Ls~~l~~~v~~vd~-RnHG~Sp~~--------~~h~~~~ma~dv~~Fi~~v~~~~ 120 (315)
T KOG2382|consen 51 RAPPAIILHGLLGSK-ENWRSVAKNLSRKLGRDVYAVDV-RNHGSSPKI--------TVHNYEAMAEDVKLFIDGVGGST 120 (315)
T ss_pred CCCceEEecccccCC-CCHHHHHHHhcccccCceEEEec-ccCCCCccc--------cccCHHHHHHHHHHHHHHccccc
Confidence 569999999999996 6789999999987 889999999 888877643 1233456778888888888643
Q ss_pred CCceEEEEEeeccH-HHHHHcc-CCc-CceEEEEec-cC-CcC-------------------------------------
Q 026476 116 GITAIGAAGFCWGA-KVVVQLG-KRE-FIQAAVLLH-PS-FVT------------------------------------- 153 (238)
Q Consensus 116 ~~~~i~l~G~S~GG-~~a~~~a-~~~-~i~a~i~~~-~~-~~~------------------------------------- 153 (238)
.-.++.++|||||| .+++..+ ..| .+...|... .+ ...
T Consensus 121 ~~~~~~l~GHsmGG~~~~m~~t~~~p~~~~rliv~D~sP~~~~~~~~e~~e~i~~m~~~d~~~~~~~~rke~~~~l~~~~ 200 (315)
T KOG2382|consen 121 RLDPVVLLGHSMGGVKVAMAETLKKPDLIERLIVEDISPGGVGRSYGEYRELIKAMIQLDLSIGVSRGRKEALKSLIEVG 200 (315)
T ss_pred ccCCceecccCcchHHHHHHHHHhcCcccceeEEEecCCccCCcccchHHHHHHHHHhccccccccccHHHHHHHHHHHh
Confidence 34689999999999 5555544 233 333333321 10 000
Q ss_pred -------------------------------------------cccc--cccCCcEEEEecCCCCCCCHHhHHHHHHHHh
Q 026476 154 -------------------------------------------VDDI--KGVEVPLSILGAEIDRLSPPALVKEFEEALN 188 (238)
Q Consensus 154 -------------------------------------------~~~~--~~~~~P~L~i~g~~D~~~p~~~~~~~~~~~~ 188 (238)
..++ .....|+|+++|.++.++|.+.-.++...+.
T Consensus 201 ~d~~~~~fi~~nl~~~~~~~s~~w~~nl~~i~~~~~~~~~~s~~~~l~~~~~~~pvlfi~g~~S~fv~~~~~~~~~~~fp 280 (315)
T KOG2382|consen 201 FDNLVRQFILTNLKKSPSDGSFLWRVNLDSIASLLDEYEILSYWADLEDGPYTGPVLFIKGLQSKFVPDEHYPRMEKIFP 280 (315)
T ss_pred cchHHHHHHHHhcCcCCCCCceEEEeCHHHHHHHHHHHHhhcccccccccccccceeEEecCCCCCcChhHHHHHHHhcc
Confidence 0002 3457799999999999999998888888763
Q ss_pred hcCCCCceEEEcCCCCeeeeecCCCCCHHHHHHHHHHHHHHHHHHHHhc
Q 026476 189 AKSGVDSFVKIFPKVAHGWTVRYNVEDETAVKAAEEAHHNLLEWFAKYV 237 (238)
Q Consensus 189 ~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~ 237 (238)
.++++.++++||..+.+.+ ++..+.+.+||.++.
T Consensus 281 -----~~e~~~ld~aGHwVh~E~P----------~~~~~~i~~Fl~~~~ 314 (315)
T KOG2382|consen 281 -----NVEVHELDEAGHWVHLEKP----------EEFIESISEFLEEPE 314 (315)
T ss_pred -----chheeecccCCceeecCCH----------HHHHHHHHHHhcccC
Confidence 5789999999999987543 688999999988754
No 92
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.53 E-value=3.8e-13 Score=108.04 Aligned_cols=121 Identities=16% Similarity=0.099 Sum_probs=76.2
Q ss_pred eEEee-CCeeEEEec--CC-CCCeeEEEEeccCCCCCchHHHHHHHHHHCCCEEEeccCCCCCccCCCCCcchHhhHhhc
Q 026476 21 HVEKL-GGLNAYVTG--SP-DSKLAVLLISDVYGYEAPNLRKLADKVAAAGFYVAVPDFFHGDPYVADGGKPLQEWIKDH 96 (238)
Q Consensus 21 ~~~~~-~~~~~~~~~--p~-~~~~~vl~~hg~~g~~~~~~~~~a~~l~~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~ 96 (238)
+.+++ ++...|... ++ ...+++|++||.++.- ..+-.-.+.|++ ...|.++|+ .|.|++....-. .
T Consensus 68 ~~v~i~~~~~iw~~~~~~~~~~~~plVliHGyGAg~-g~f~~Nf~~La~-~~~vyaiDl-lG~G~SSRP~F~-------~ 137 (365)
T KOG4409|consen 68 KYVRIPNGIEIWTITVSNESANKTPLVLIHGYGAGL-GLFFRNFDDLAK-IRNVYAIDL-LGFGRSSRPKFS-------I 137 (365)
T ss_pred eeeecCCCceeEEEeecccccCCCcEEEEeccchhH-HHHHHhhhhhhh-cCceEEecc-cCCCCCCCCCCC-------C
Confidence 34444 345555543 33 3457899999965432 344444555666 799999999 898877653111 0
Q ss_pred CCCcchhcHHHHH-HHHHhcCCceEEEEEeeccHHHHHHcc-CCc-CceEEEEeccCC
Q 026476 97 GVDKGFEEAKPVI-QALKSKGITAIGAAGFCWGAKVVVQLG-KRE-FIQAAVLLHPSF 151 (238)
Q Consensus 97 ~~~~~~~d~~~~~-~~l~~~~~~~i~l~G~S~GG~~a~~~a-~~~-~i~a~i~~~~~~ 151 (238)
+.........+.+ +|-+..+.+++.|+|||+||+++..+| .+| +|+..|+..|..
T Consensus 138 d~~~~e~~fvesiE~WR~~~~L~KmilvGHSfGGYLaa~YAlKyPerV~kLiLvsP~G 195 (365)
T KOG4409|consen 138 DPTTAEKEFVESIEQWRKKMGLEKMILVGHSFGGYLAAKYALKYPERVEKLILVSPWG 195 (365)
T ss_pred CcccchHHHHHHHHHHHHHcCCcceeEeeccchHHHHHHHHHhChHhhceEEEecccc
Confidence 1111112222222 333445788999999999999999998 555 788888887654
No 93
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.50 E-value=9.4e-13 Score=99.80 Aligned_cols=185 Identities=19% Similarity=0.238 Sum_probs=129.9
Q ss_pred eeEEEecCCCCCeeEEEEeccCCCCCchHHHHHHHHHHCCCEEEeccCCCCCccCCCCC-----cchHhhHhhcCCCcch
Q 026476 28 LNAYVTGSPDSKLAVLLISDVYGYEAPNLRKLADKVAAAGFYVAVPDFFHGDPYVADGG-----KPLQEWIKDHGVDKGF 102 (238)
Q Consensus 28 ~~~~~~~p~~~~~~vl~~hg~~g~~~~~~~~~a~~l~~~G~~v~~~d~~~g~~~~~~~~-----~~~~~~~~~~~~~~~~ 102 (238)
++++.+...++.+.-|++.+..|.....++++|...+++||.|++.|+ ||.+-+.... -...+| ..
T Consensus 18 l~~~~~pA~~~~~g~~~va~a~Gv~~~fYRrfA~~a~~~Gf~Vlt~dy-RG~g~S~p~~~~~~~~~~~Dw--------A~ 88 (281)
T COG4757 18 LPGQRFPADGKASGRLVVAGATGVGQYFYRRFAAAAAKAGFEVLTFDY-RGIGQSRPASLSGSQWRYLDW--------AR 88 (281)
T ss_pred CccccccCCCCCCCcEEecccCCcchhHhHHHHHHhhccCceEEEEec-ccccCCCccccccCccchhhh--------hh
Confidence 566666444555667777777776556789999999999999999999 8887654331 122333 44
Q ss_pred hcHHHHHHHHHhc-CCceEEEEEeeccHHHHHHccCCcCceEEEEeccC-------------------------------
Q 026476 103 EEAKPVIQALKSK-GITAIGAAGFCWGAKVVVQLGKREFIQAAVLLHPS------------------------------- 150 (238)
Q Consensus 103 ~d~~~~~~~l~~~-~~~~i~l~G~S~GG~~a~~~a~~~~i~a~i~~~~~------------------------------- 150 (238)
.|+.++++++++. +.-+...+|||+||.+..++...++..+...+...
T Consensus 89 ~D~~aal~~~~~~~~~~P~y~vgHS~GGqa~gL~~~~~k~~a~~vfG~gagwsg~m~~~~~l~~~~l~~lv~p~lt~w~g 168 (281)
T COG4757 89 LDFPAALAALKKALPGHPLYFVGHSFGGQALGLLGQHPKYAAFAVFGSGAGWSGWMGLRERLGAVLLWNLVGPPLTFWKG 168 (281)
T ss_pred cchHHHHHHHHhhCCCCceEEeeccccceeecccccCcccceeeEeccccccccchhhhhcccceeeccccccchhhccc
Confidence 7899999999875 45688999999999999988866544333322100
Q ss_pred ---------C--cC-------------c-------------ccccccCCcEEEEecCCCCCCCHHhHHHHHHHHhhcCCC
Q 026476 151 ---------F--VT-------------V-------------DDIKGVEVPLSILGAEIDRLSPPALVKEFEEALNAKSGV 193 (238)
Q Consensus 151 ---------~--~~-------------~-------------~~~~~~~~P~L~i~g~~D~~~p~~~~~~~~~~~~~~~~~ 193 (238)
. .+ + +..+.+++|++++...+|+.+|+...+.+.+... +.
T Consensus 169 ~~p~~l~G~G~d~p~~v~RdW~RwcR~p~y~fddp~~~~~~q~yaaVrtPi~~~~~~DD~w~P~As~d~f~~~y~---nA 245 (281)
T COG4757 169 YMPKDLLGLGSDLPGTVMRDWARWCRHPRYYFDDPAMRNYRQVYAAVRTPITFSRALDDPWAPPASRDAFASFYR---NA 245 (281)
T ss_pred cCcHhhcCCCccCcchHHHHHHHHhcCccccccChhHhHHHHHHHHhcCceeeeccCCCCcCCHHHHHHHHHhhh---cC
Confidence 0 00 0 0145678999999999999999999999999873 44
Q ss_pred CceEEEcCCC----CeeeeecCCCCCHHHHHHHHHHHHHHHHHH
Q 026476 194 DSFVKIFPKV----AHGWTVRYNVEDETAVKAAEEAHHNLLEWF 233 (238)
Q Consensus 194 ~~~~~~~~g~----~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl 233 (238)
+.+.+.++-. +|.=..+ ...|..|+++++||
T Consensus 246 pl~~~~~~~~~~~lGH~gyfR---------~~~Ealwk~~L~w~ 280 (281)
T COG4757 246 PLEMRDLPRAEGPLGHMGYFR---------EPFEALWKEMLGWF 280 (281)
T ss_pred cccceecCcccCcccchhhhc---------cchHHHHHHHHHhh
Confidence 6777777643 5532222 12377999999987
No 94
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.49 E-value=1.6e-12 Score=111.98 Aligned_cols=171 Identities=13% Similarity=0.119 Sum_probs=121.1
Q ss_pred ceEE-eeCCeeEEEecCCC---CCeeEEEEeccCCCCC----chHHHHHHHHHHCCCEEEeccCCCCCccCCCCCcchHh
Q 026476 20 GHVE-KLGGLNAYVTGSPD---SKLAVLLISDVYGYEA----PNLRKLADKVAAAGFYVAVPDFFHGDPYVADGGKPLQE 91 (238)
Q Consensus 20 ~~~~-~~~~~~~~~~~p~~---~~~~vl~~hg~~g~~~----~~~~~~a~~l~~~G~~v~~~d~~~g~~~~~~~~~~~~~ 91 (238)
|+++ +-+-+..+.+.|.. ...+||+++.+..... ..-+.++++|.++||.|+++|+ +..+...
T Consensus 192 g~VV~~n~l~eLiqY~P~te~v~~~PLLIVPp~INK~YIlDL~P~~SlVr~lv~qG~~VflIsW-~nP~~~~-------- 262 (560)
T TIGR01839 192 GAVVFRNEVLELIQYKPITEQQHARPLLVVPPQINKFYIFDLSPEKSFVQYCLKNQLQVFIISW-RNPDKAH-------- 262 (560)
T ss_pred CceeEECCceEEEEeCCCCCCcCCCcEEEechhhhhhheeecCCcchHHHHHHHcCCeEEEEeC-CCCChhh--------
Confidence 3444 33457888888853 2478999998764211 1116899999999999999997 4432211
Q ss_pred hHhhcCCCcchhcHHHHHHHHHhc-CCceEEEEEeeccHHHHHH----cc-CCc--CceEEEEeccCCcC----------
Q 026476 92 WIKDHGVDKGFEEAKPVIQALKSK-GITAIGAAGFCWGAKVVVQ----LG-KRE--FIQAAVLLHPSFVT---------- 153 (238)
Q Consensus 92 ~~~~~~~~~~~~d~~~~~~~l~~~-~~~~i~l~G~S~GG~~a~~----~a-~~~--~i~a~i~~~~~~~~---------- 153 (238)
...+.+.+++.+.++++.+++. +..+|.++|+|+||.++.. ++ ..+ +|+..+++......
T Consensus 263 --r~~~ldDYv~~i~~Ald~V~~~tG~~~vnl~GyC~GGtl~a~~~a~~aA~~~~~~V~sltllatplDf~~~g~l~~f~ 340 (560)
T TIGR01839 263 --REWGLSTYVDALKEAVDAVRAITGSRDLNLLGACAGGLTCAALVGHLQALGQLRKVNSLTYLVSLLDSTMESPAALFA 340 (560)
T ss_pred --cCCCHHHHHHHHHHHHHHHHHhcCCCCeeEEEECcchHHHHHHHHHHHhcCCCCceeeEEeeecccccCCCCcchhcc
Confidence 1223344556788899999887 6789999999999999996 34 333 57877765321110
Q ss_pred --------------------------------------------------------------------------------
Q 026476 154 -------------------------------------------------------------------------------- 153 (238)
Q Consensus 154 -------------------------------------------------------------------------------- 153 (238)
T Consensus 341 ~e~~~~~~e~~~~~~G~lpg~~ma~~F~~LrP~dliw~y~v~~yllg~~p~~fdll~Wn~D~t~lPg~~~~e~l~ly~~N 420 (560)
T TIGR01839 341 DEQTLEAAKRRSYQAGVLDGSEMAKVFAWMRPNDLIWNYWVNNYLLGNEPPAFDILYWNNDTTRLPAAFHGDLLDMFKSN 420 (560)
T ss_pred ChHHHHHHHHHHHhcCCcCHHHHHHHHHhcCchhhhHHHHHHHhhcCCCcchhhHHHHhCcCccchHHHHHHHHHHHhcC
Confidence
Q ss_pred -------------cccccccCCcEEEEecCCCCCCCHHhHHHHHHHHhhcCCCCceEEEcCCCCee
Q 026476 154 -------------VDDIKGVEVPLSILGAEIDRLSPPALVKEFEEALNAKSGVDSFVKIFPKVAHG 206 (238)
Q Consensus 154 -------------~~~~~~~~~P~L~i~g~~D~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~H~ 206 (238)
.-++.+|++|+|++.+++|.++|.+.+.++.+.+. + +++++..+ +||-
T Consensus 421 ~L~~pG~l~v~G~~idL~~I~~Pvl~va~~~DHIvPw~s~~~~~~l~g---s-~~~fvl~~-gGHI 481 (560)
T TIGR01839 421 PLTRPDALEVCGTPIDLKKVKCDSFSVAGTNDHITPWDAVYRSALLLG---G-KRRFVLSN-SGHI 481 (560)
T ss_pred CCCCCCCEEECCEEechhcCCCCeEEEecCcCCcCCHHHHHHHHHHcC---C-CeEEEecC-CCcc
Confidence 01178899999999999999999999999988772 2 67888888 5883
No 95
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.48 E-value=8.2e-12 Score=98.00 Aligned_cols=189 Identities=16% Similarity=0.174 Sum_probs=119.2
Q ss_pred EEEecCC--CCCeeEEEEeccCCCCCchHHHHHHHHHHCCCEEEeccCCCCCccCCCCCcchHhhHhhcCCCcchhcHHH
Q 026476 30 AYVTGSP--DSKLAVLLISDVYGYEAPNLRKLADKVAAAGFYVAVPDFFHGDPYVADGGKPLQEWIKDHGVDKGFEEAKP 107 (238)
Q Consensus 30 ~~~~~p~--~~~~~vl~~hg~~g~~~~~~~~~a~~l~~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 107 (238)
..++.|+ ++-|.+||+||.. ....+|..+.++++++||+|+.+|++ ...... .....+++.+
T Consensus 6 l~v~~P~~~g~yPVv~f~~G~~-~~~s~Ys~ll~hvAShGyIVV~~d~~-~~~~~~--------------~~~~~~~~~~ 69 (259)
T PF12740_consen 6 LLVYYPSSAGTYPVVLFLHGFL-LINSWYSQLLEHVASHGYIVVAPDLY-SIGGPD--------------DTDEVASAAE 69 (259)
T ss_pred eEEEecCCCCCcCEEEEeCCcC-CCHHHHHHHHHHHHhCceEEEEeccc-ccCCCC--------------cchhHHHHHH
Confidence 4445565 4457777787765 44577999999999999999999973 221111 0113355666
Q ss_pred HHHHHHhc-----------CCceEEEEEeeccHHHHHHccC-C------cCceEEEEeccCCc------------Cc-cc
Q 026476 108 VIQALKSK-----------GITAIGAAGFCWGAKVVVQLGK-R------EFIQAAVLLHPSFV------------TV-DD 156 (238)
Q Consensus 108 ~~~~l~~~-----------~~~~i~l~G~S~GG~~a~~~a~-~------~~i~a~i~~~~~~~------------~~-~~ 156 (238)
+++|+.+. |..+|++.|||-||-++..++. + .++++++.+.|.-- +. ..
T Consensus 70 vi~Wl~~~L~~~l~~~v~~D~s~l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPVdG~~~~~~~~P~v~~~~p~ 149 (259)
T PF12740_consen 70 VIDWLAKGLESKLPLGVKPDFSKLALAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPVDGMSKGSQTEPPVLTYTPQ 149 (259)
T ss_pred HHHHHHhcchhhccccccccccceEEeeeCCCCHHHHHHHhhhcccccccceeEEEEeccccccccccCCCCccccCccc
Confidence 66666442 4579999999999999998773 2 27899999876531 01 11
Q ss_pred ccccCCcEEEEecCCCC---------CCCHH-hHHHHHHHHhhcCCCCceEEEcCCCCeeeeecCC-CC-----------
Q 026476 157 IKGVEVPLSILGAEIDR---------LSPPA-LVKEFEEALNAKSGVDSFVKIFPKVAHGWTVRYN-VE----------- 214 (238)
Q Consensus 157 ~~~~~~P~L~i~g~~D~---------~~p~~-~~~~~~~~~~~~~~~~~~~~~~~g~~H~~~~~~~-~~----------- 214 (238)
..+...|+|+|-..-.+ -.|.. .-++++++++ .+....+..+.+|.-+.+.. ..
T Consensus 150 s~~~~~P~lviGtGLg~~~~~~~~~~CaP~g~n~~~Ff~~~~----~p~~~~v~~~~GH~d~LDd~~~~~~~~~~~~~~C 225 (259)
T PF12740_consen 150 SFDFSMPALVIGTGLGGEPRNPLFPPCAPAGVNYREFFDECK----PPSWHFVAKDYGHMDFLDDDTPGYVGLCLFRCLC 225 (259)
T ss_pred ccCCCCCeEEEecccCcccccccCCCCCCCCCCHHHHHHhcC----CCEEEEEeCCCCchHhhcCCCcchhHHHHHHhhc
Confidence 22345899999777764 22333 5677888772 24556666788996554333 10
Q ss_pred --CHHHH-HHHHHHHHHHHHHHHHhcC
Q 026476 215 --DETAV-KAAEEAHHNLLEWFAKYVK 238 (238)
Q Consensus 215 --~~~~~-~~~~~~~~~~~~fl~~~~~ 238 (238)
-+..+ .+.+-.--.+.+||+..++
T Consensus 226 k~g~~~~~~~r~f~~g~~vAfl~~~l~ 252 (259)
T PF12740_consen 226 KNGPDDRDPMRRFVGGIMVAFLNAQLQ 252 (259)
T ss_pred cCCCCCHHHHHHHHHHHHHHHHHHHhc
Confidence 01021 2334444568889988763
No 96
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=99.48 E-value=1.7e-12 Score=114.62 Aligned_cols=111 Identities=12% Similarity=0.020 Sum_probs=81.0
Q ss_pred eeEEEecCCC--CCeeEEEEeccCCCCC---chHHHHHHHHHHCCCEEEeccCCCCCccCCCCCcchHhhHhhcCCCcch
Q 026476 28 LNAYVTGSPD--SKLAVLLISDVYGYEA---PNLRKLADKVAAAGFYVAVPDFFHGDPYVADGGKPLQEWIKDHGVDKGF 102 (238)
Q Consensus 28 ~~~~~~~p~~--~~~~vl~~hg~~g~~~---~~~~~~a~~l~~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 102 (238)
+.++++.|++ +.|+||++|+...... ......++.|+++||+|+++|+ ||++.+.+... ... ....
T Consensus 9 L~~~~~~P~~~~~~P~Il~~~gyg~~~~~~~~~~~~~~~~l~~~Gy~vv~~D~-RG~g~S~g~~~-------~~~-~~~~ 79 (550)
T TIGR00976 9 LAIDVYRPAGGGPVPVILSRTPYGKDAGLRWGLDKTEPAWFVAQGYAVVIQDT-RGRGASEGEFD-------LLG-SDEA 79 (550)
T ss_pred EEEEEEecCCCCCCCEEEEecCCCCchhhccccccccHHHHHhCCcEEEEEec-cccccCCCceE-------ecC-cccc
Confidence 6667777763 4578888887543321 1223466789999999999999 99987764311 111 4577
Q ss_pred hcHHHHHHHHHhc--CCceEEEEEeeccHHHHHHccC--CcCceEEEEe
Q 026476 103 EEAKPVIQALKSK--GITAIGAAGFCWGAKVVVQLGK--REFIQAAVLL 147 (238)
Q Consensus 103 ~d~~~~~~~l~~~--~~~~i~l~G~S~GG~~a~~~a~--~~~i~a~i~~ 147 (238)
+|+.+++++++++ ...+|+++|+|+||.+++.++. .+.+++++..
T Consensus 80 ~D~~~~i~~l~~q~~~~~~v~~~G~S~GG~~a~~~a~~~~~~l~aiv~~ 128 (550)
T TIGR00976 80 ADGYDLVDWIAKQPWCDGNVGMLGVSYLAVTQLLAAVLQPPALRAIAPQ 128 (550)
T ss_pred hHHHHHHHHHHhCCCCCCcEEEEEeChHHHHHHHHhccCCCceeEEeec
Confidence 8999999999887 3469999999999999999874 3478888764
No 97
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=99.46 E-value=2.9e-12 Score=103.39 Aligned_cols=132 Identities=20% Similarity=0.195 Sum_probs=92.7
Q ss_pred HHHCCCEEEeccCCCCCccCCCCCcchHhhHhhcCCCcchhcHHHHHHHHHhcC--CceEEEEEeeccHHHHHHccC--C
Q 026476 63 VAAAGFYVAVPDFFHGDPYVADGGKPLQEWIKDHGVDKGFEEAKPVIQALKSKG--ITAIGAAGFCWGAKVVVQLGK--R 138 (238)
Q Consensus 63 l~~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~--~~~i~l~G~S~GG~~a~~~a~--~ 138 (238)
|+++||+|++.|. ||.+.|.+.... ......+|..++|+|+.+++ ..+|+++|.|++|..++.+|. .
T Consensus 53 ~~~~GY~vV~~D~-RG~g~S~G~~~~--------~~~~e~~D~~d~I~W~~~Qpws~G~VGm~G~SY~G~~q~~~A~~~~ 123 (272)
T PF02129_consen 53 FAERGYAVVVQDV-RGTGGSEGEFDP--------MSPNEAQDGYDTIEWIAAQPWSNGKVGMYGISYGGFTQWAAAARRP 123 (272)
T ss_dssp HHHTT-EEEEEE--TTSTTS-S-B-T--------TSHHHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTTT-
T ss_pred HHhCCCEEEEECC-cccccCCCcccc--------CChhHHHHHHHHHHHHHhCCCCCCeEEeeccCHHHHHHHHHHhcCC
Confidence 9999999999999 999888764111 13456789999999999984 469999999999999999774 4
Q ss_pred cCceEEEEeccCCcC-----------------------------------------------------------------
Q 026476 139 EFIQAAVLLHPSFVT----------------------------------------------------------------- 153 (238)
Q Consensus 139 ~~i~a~i~~~~~~~~----------------------------------------------------------------- 153 (238)
|.++|++...+....
T Consensus 124 p~LkAi~p~~~~~d~~~~~~~~gG~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (272)
T PF02129_consen 124 PHLKAIVPQSGWSDLYRDSIYPGGAFRLGFFAGWEDLQSQQEDPQSRPAPDRDYLRERARYEALGDSPLGRLPRDPPYWD 203 (272)
T ss_dssp TTEEEEEEESE-SBTCCTSSEETTEEBCCHHHHHHHHHHHHHHHTCCCCSSSHHHHHHHHHHCHHHHHHHHCHGGTHHHH
T ss_pred CCceEEEecccCCcccccchhcCCcccccchhHHHHHHHHhhcccCCCchhhhhhhhhhhhhhhhhHHHhhhccccHHHH
Confidence 589998876432110
Q ss_pred -----------------cccccccCCcEEEEecCCCCCCCHHhHHHHHHHHhhcCC-CCceEEEcCCCCee
Q 026476 154 -----------------VDDIKGVEVPLSILGAEIDRLSPPALVKEFEEALNAKSG-VDSFVKIFPKVAHG 206 (238)
Q Consensus 154 -----------------~~~~~~~~~P~L~i~g~~D~~~p~~~~~~~~~~~~~~~~-~~~~~~~~~g~~H~ 206 (238)
...+.++++|+|++.|..|..+. ....+.++.+ .+.+ .+..+.+-|+ .|+
T Consensus 204 ~~~~~~~~~~~w~~~~~~~~~~~i~vP~l~v~Gw~D~~~~-~~~~~~~~~l-~~~~~~~~~Liigpw-~H~ 271 (272)
T PF02129_consen 204 EWLDHPPYDPFWQERSPSERLDKIDVPVLIVGGWYDTLFL-RGALRAYEAL-RAPGSKPQRLIIGPW-THG 271 (272)
T ss_dssp HHHHT-SSSHHHHTTBHHHHHGG--SEEEEEEETTCSSTS-HHHHHHHHHH-CTTSTC-EEEEEESE-STT
T ss_pred HHHhCCCcCHHHHhCChHHHHhhCCCCEEEecccCCcccc-hHHHHHHHHh-hcCCCCCCEEEEeCC-CCC
Confidence 00146789999999999996666 6667777878 4444 4557777774 664
No 98
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=99.43 E-value=5.4e-12 Score=99.65 Aligned_cols=193 Identities=13% Similarity=0.170 Sum_probs=127.3
Q ss_pred CeeEEEEeccCCCCCchHHHHHHHHHHCCCEEEeccCCCCCc--cCCCC------CcchHhhHhhcCC------------
Q 026476 39 KLAVLLISDVYGYEAPNLRKLADKVAAAGFYVAVPDFFHGDP--YVADG------GKPLQEWIKDHGV------------ 98 (238)
Q Consensus 39 ~~~vl~~hg~~g~~~~~~~~~a~~l~~~G~~v~~~d~~~g~~--~~~~~------~~~~~~~~~~~~~------------ 98 (238)
-|.|||=||..|++ ..|..++-.||++||.|.++++ |-.+ ++.-. +.-...|+.-...
T Consensus 118 ~PvvvFSHGLggsR-t~YSa~c~~LAShG~VVaavEH-RD~SA~~Ty~~~~~~~n~~lveq~~~ir~v~~~ekef~irNe 195 (399)
T KOG3847|consen 118 YPVVVFSHGLGGSR-TLYSAYCTSLASHGFVVAAVEH-RDRSACWTYVLKEKHENEPLVEQWIKIRLVEANEKEFHIRNE 195 (399)
T ss_pred ccEEEEecccccch-hhHHHHhhhHhhCceEEEEeec-ccCcceeEEEecccccCCcccccceEeeeeccCceeEEeeCH
Confidence 47778888887876 6889999999999999999998 3332 11110 1111122211100
Q ss_pred --CcchhcHHHHHHHHHhc------------------------CCceEEEEEeeccHHHHHHcc-CCcCceEEEEeccCC
Q 026476 99 --DKGFEEAKPVIQALKSK------------------------GITAIGAAGFCWGAKVVVQLG-KREFIQAAVLLHPSF 151 (238)
Q Consensus 99 --~~~~~d~~~~~~~l~~~------------------------~~~~i~l~G~S~GG~~a~~~a-~~~~i~a~i~~~~~~ 151 (238)
.+.++.+..++..+++. +..+++++|||+||.+++... ...+++++|++.+..
T Consensus 196 qv~~R~~Ec~~aL~il~~i~~g~~~~~~L~g~~~~~~~~K~nl~~s~~aViGHSFGgAT~i~~ss~~t~FrcaI~lD~WM 275 (399)
T KOG3847|consen 196 QVGQRAQECQKALKILEQINDGGTPDNVLPGNNSDLEQLKGNLDTSQAAVIGHSFGGATSIASSSSHTDFRCAIALDAWM 275 (399)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCCchhcccCccccHHHHhcchhhhhhhheeccccchhhhhhhccccceeeeeeeeeee
Confidence 12334455555555433 124799999999999999865 556899999999887
Q ss_pred cCcc--cccccCCcEEEEecCCCCCCCHHhHHHHHHHHhhcCCCCceEEEcCCCCeeeeecCCC-------------CCH
Q 026476 152 VTVD--DIKGVEVPLSILGAEIDRLSPPALVKEFEEALNAKSGVDSFVKIFPKVAHGWTVRYNV-------------EDE 216 (238)
Q Consensus 152 ~~~~--~~~~~~~P~L~i~g~~D~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~H~~~~~~~~-------------~~~ 216 (238)
.+.+ ..++++-|+|+|.- |.+-..+....+.+.+.. +..-.+..+.|+-|.-..+... ...
T Consensus 276 ~Pl~~~~~~~arqP~~finv--~~fQ~~en~~vmKki~~~--n~g~~~it~~GsVHqnfsDfpfv~p~~i~k~f~~kg~~ 351 (399)
T KOG3847|consen 276 FPLDQLQYSQARQPTLFINV--EDFQWNENLLVMKKIESQ--NEGNHVITLDGSVHQNFSDFPFVTPNWIGKVFKVKGET 351 (399)
T ss_pred cccchhhhhhccCCeEEEEc--ccccchhHHHHHHhhhCC--CccceEEEEccceecccccCccccHHHHHHHhccCCCC
Confidence 7654 46788999999995 334457777777777632 2234577888888854322111 112
Q ss_pred HHHHHHHHHHHHHHHHHHHhc
Q 026476 217 TAVKAAEEAHHNLLEWFAKYV 237 (238)
Q Consensus 217 ~~~~~~~~~~~~~~~fl~~~~ 237 (238)
+.....+.+.+..++||++|+
T Consensus 352 dpy~~~~~~~r~slaFLq~h~ 372 (399)
T KOG3847|consen 352 DPYEAMQIAIRASLAFLQKHL 372 (399)
T ss_pred ChHHHHHHHHHHHHHHHHhhh
Confidence 222567888899999999986
No 99
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=99.41 E-value=5e-12 Score=96.71 Aligned_cols=171 Identities=18% Similarity=0.258 Sum_probs=101.9
Q ss_pred eeEEEecCCCC---CeeEEEEeccCCCCCchHHHHHHHHHHCCCEEEeccCCCCCccCCCCCcchHhhHhhcCCCcchhc
Q 026476 28 LNAYVTGSPDS---KLAVLLISDVYGYEAPNLRKLADKVAAAGFYVAVPDFFHGDPYVADGGKPLQEWIKDHGVDKGFEE 104 (238)
Q Consensus 28 ~~~~~~~p~~~---~~~vl~~hg~~g~~~~~~~~~a~~l~~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d 104 (238)
+..|-..|+.. +...|++..+++.....+..+|.+|+..||.|+-+|...--|.+.+. +..++......+
T Consensus 15 I~vwet~P~~~~~~~~~tiliA~Gf~rrmdh~agLA~YL~~NGFhViRyDsl~HvGlSsG~-------I~eftms~g~~s 87 (294)
T PF02273_consen 15 IRVWETRPKNNEPKRNNTILIAPGFARRMDHFAGLAEYLSANGFHVIRYDSLNHVGLSSGD-------INEFTMSIGKAS 87 (294)
T ss_dssp EEEEEE---TTS---S-EEEEE-TT-GGGGGGHHHHHHHHTTT--EEEE---B--------------------HHHHHHH
T ss_pred EEEeccCCCCCCcccCCeEEEecchhHHHHHHHHHHHHHhhCCeEEEeccccccccCCCCC-------hhhcchHHhHHH
Confidence 67777778642 23455555556765678899999999999999999984333544432 234444556789
Q ss_pred HHHHHHHHHhcCCceEEEEEeeccHHHHHHccCCcCceEEEEeccCCc--------------------------------
Q 026476 105 AKPVIQALKSKGITAIGAAGFCWGAKVVVQLGKREFIQAAVLLHPSFV-------------------------------- 152 (238)
Q Consensus 105 ~~~~~~~l~~~~~~~i~l~G~S~GG~~a~~~a~~~~i~a~i~~~~~~~-------------------------------- 152 (238)
+..+++|++..+..+++++--|..|.+|+..+.+..+.-.|...|...
T Consensus 88 L~~V~dwl~~~g~~~~GLIAaSLSaRIAy~Va~~i~lsfLitaVGVVnlr~TLe~al~~Dyl~~~i~~lp~dldfeGh~l 167 (294)
T PF02273_consen 88 LLTVIDWLATRGIRRIGLIAASLSARIAYEVAADINLSFLITAVGVVNLRDTLEKALGYDYLQLPIEQLPEDLDFEGHNL 167 (294)
T ss_dssp HHHHHHHHHHTT---EEEEEETTHHHHHHHHTTTS--SEEEEES--S-HHHHHHHHHSS-GGGS-GGG--SEEEETTEEE
T ss_pred HHHHHHHHHhcCCCcchhhhhhhhHHHHHHHhhccCcceEEEEeeeeeHHHHHHHHhccchhhcchhhCCCccccccccc
Confidence 999999999989999999999999999999987666666555544321
Q ss_pred -------------------CcccccccCCcEEEEecCCCCCCCHHhHHHHHHHHhhcCCCCceEEEcCCCCeeee
Q 026476 153 -------------------TVDDIKGVEVPLSILGAEIDRLSPPALVKEFEEALNAKSGVDSFVKIFPKVAHGWT 208 (238)
Q Consensus 153 -------------------~~~~~~~~~~P~L~i~g~~D~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~H~~~ 208 (238)
+..+.+++.+|++.+++.+|..|-...+..+.+.+++ + ..++...+|+.|.+.
T Consensus 168 ~~~vFv~dc~e~~w~~l~ST~~~~k~l~iP~iaF~A~~D~WV~q~eV~~~~~~~~s--~-~~klysl~Gs~HdL~ 239 (294)
T PF02273_consen 168 GAEVFVTDCFEHGWDDLDSTINDMKRLSIPFIAFTANDDDWVKQSEVEELLDNINS--N-KCKLYSLPGSSHDLG 239 (294)
T ss_dssp EHHHHHHHHHHTT-SSHHHHHHHHTT--S-EEEEEETT-TTS-HHHHHHHHTT-TT-----EEEEEETT-SS-TT
T ss_pred chHHHHHHHHHcCCccchhHHHHHhhCCCCEEEEEeCCCccccHHHHHHHHHhcCC--C-ceeEEEecCccchhh
Confidence 0112567899999999999999999888888887732 2 677888999999984
No 100
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=99.38 E-value=1.1e-11 Score=96.66 Aligned_cols=113 Identities=17% Similarity=0.189 Sum_probs=77.6
Q ss_pred CeeEEEecCCCC-CeeEEEEeccCCCCCchHHHHHHHHHHC-CCEEEeccCCCCCccCCCCCcchHhhHhhcCCCcchhc
Q 026476 27 GLNAYVTGSPDS-KLAVLLISDVYGYEAPNLRKLADKVAAA-GFYVAVPDFFHGDPYVADGGKPLQEWIKDHGVDKGFEE 104 (238)
Q Consensus 27 ~~~~~~~~p~~~-~~~vl~~hg~~g~~~~~~~~~a~~l~~~-G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d 104 (238)
++..|+..|..+ .|.+++.|| +|...-.+..++..|.+. -+.|+++|+ |||+.+.-... .....+...+|
T Consensus 61 t~n~Y~t~~~~t~gpil~l~HG-~G~S~LSfA~~a~el~s~~~~r~~a~Dl-RgHGeTk~~~e------~dlS~eT~~KD 132 (343)
T KOG2564|consen 61 TFNVYLTLPSATEGPILLLLHG-GGSSALSFAIFASELKSKIRCRCLALDL-RGHGETKVENE------DDLSLETMSKD 132 (343)
T ss_pred eEEEEEecCCCCCccEEEEeec-CcccchhHHHHHHHHHhhcceeEEEeec-cccCccccCCh------hhcCHHHHHHH
Confidence 478888877544 455555555 554455678899999887 788999999 99987653211 12334556778
Q ss_pred HHHHHHHHHhcCCceEEEEEeeccHHHHHHccCC---cCceEEEEe
Q 026476 105 AKPVIQALKSKGITAIGAAGFCWGAKVVVQLGKR---EFIQAAVLL 147 (238)
Q Consensus 105 ~~~~~~~l~~~~~~~i~l~G~S~GG~~a~~~a~~---~~i~a~i~~ 147 (238)
+.+++..+=...+.+|.++||||||.+|...+.. |.+.+.+.+
T Consensus 133 ~~~~i~~~fge~~~~iilVGHSmGGaIav~~a~~k~lpsl~Gl~vi 178 (343)
T KOG2564|consen 133 FGAVIKELFGELPPQIILVGHSMGGAIAVHTAASKTLPSLAGLVVI 178 (343)
T ss_pred HHHHHHHHhccCCCceEEEeccccchhhhhhhhhhhchhhhceEEE
Confidence 8777766644456789999999999999886633 345555443
No 101
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.37 E-value=3.4e-11 Score=92.65 Aligned_cols=166 Identities=14% Similarity=0.153 Sum_probs=113.2
Q ss_pred CCCeeEEEEeccCCCCCchHHHHHHHHHHCCCEEEeccCCCCCccCCCCCcchHhhHhhcCCCcchhcHHHHHHHHHhc-
Q 026476 37 DSKLAVLLISDVYGYEAPNLRKLADKVAAAGFYVAVPDFFHGDPYVADGGKPLQEWIKDHGVDKGFEEAKPVIQALKSK- 115 (238)
Q Consensus 37 ~~~~~vl~~hg~~g~~~~~~~~~a~~l~~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~- 115 (238)
+....+++++..+|+. ..++.+.+.|-. -+.++++++ +|.+.... +....|+..+++.+...
T Consensus 5 ~~~~~L~cfP~AGGsa-~~fr~W~~~lp~-~iel~avql-PGR~~r~~--------------ep~~~di~~Lad~la~el 67 (244)
T COG3208 5 GARLRLFCFPHAGGSA-SLFRSWSRRLPA-DIELLAVQL-PGRGDRFG--------------EPLLTDIESLADELANEL 67 (244)
T ss_pred CCCceEEEecCCCCCH-HHHHHHHhhCCc-hhheeeecC-CCcccccC--------------CcccccHHHHHHHHHHHh
Confidence 3456788999887774 678888886655 488999999 77764321 12345666666555433
Q ss_pred ----CCceEEEEEeeccHHHHHHccCC----c-CceEEEEeccCCcC-------------------------c-------
Q 026476 116 ----GITAIGAAGFCWGAKVVVQLGKR----E-FIQAAVLLHPSFVT-------------------------V------- 154 (238)
Q Consensus 116 ----~~~~i~l~G~S~GG~~a~~~a~~----~-~i~a~i~~~~~~~~-------------------------~------- 154 (238)
...+.+++||||||.+|..+|+. . .+.+.++.....+. +
T Consensus 68 ~~~~~d~P~alfGHSmGa~lAfEvArrl~~~g~~p~~lfisg~~aP~~~~~~~i~~~~D~~~l~~l~~lgG~p~e~led~ 147 (244)
T COG3208 68 LPPLLDAPFALFGHSMGAMLAFEVARRLERAGLPPRALFISGCRAPHYDRGKQIHHLDDADFLADLVDLGGTPPELLEDP 147 (244)
T ss_pred ccccCCCCeeecccchhHHHHHHHHHHHHHcCCCcceEEEecCCCCCCcccCCccCCCHHHHHHHHHHhCCCChHHhcCH
Confidence 23589999999999999998842 1 24444433221110 0
Q ss_pred ----------------------ccccccCCcEEEEecCCCCCCCHHhHHHHHHHHhhcCCCCceEEEcCCCCeeeeecCC
Q 026476 155 ----------------------DDIKGVEVPLSILGAEIDRLSPPALVKEFEEALNAKSGVDSFVKIFPKVAHGWTVRYN 212 (238)
Q Consensus 155 ----------------------~~~~~~~~P~L~i~g~~D~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~H~~~~~~~ 212 (238)
..-..+.+|+.++.|++|..+..+....+.+.. +...++++|+| +|.|.+.
T Consensus 148 El~~l~LPilRAD~~~~e~Y~~~~~~pl~~pi~~~~G~~D~~vs~~~~~~W~~~t----~~~f~l~~fdG-gHFfl~~-- 220 (244)
T COG3208 148 ELMALFLPILRADFRALESYRYPPPAPLACPIHAFGGEKDHEVSRDELGAWREHT----KGDFTLRVFDG-GHFFLNQ-- 220 (244)
T ss_pred HHHHHHHHHHHHHHHHhcccccCCCCCcCcceEEeccCcchhccHHHHHHHHHhh----cCCceEEEecC-cceehhh--
Confidence 002467899999999999999888888777765 23788999996 9999763
Q ss_pred CCCHHHHHHHHHHHHHHHHHHH
Q 026476 213 VEDETAVKAAEEAHHNLLEWFA 234 (238)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~fl~ 234 (238)
..+++...+.+.+.
T Consensus 221 --------~~~~v~~~i~~~l~ 234 (244)
T COG3208 221 --------QREEVLARLEQHLA 234 (244)
T ss_pred --------hHHHHHHHHHHHhh
Confidence 44566666666664
No 102
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=99.36 E-value=7.6e-12 Score=105.42 Aligned_cols=66 Identities=18% Similarity=0.217 Sum_probs=52.5
Q ss_pred ccCCcEEEEecCCCCCCCHHhHHHHHHHHhhcCCCCceEEEcCC-CCeeeeecCCCCCHHHHHHHHHHHHHHHHHHHH
Q 026476 159 GVEVPLSILGAEIDRLSPPALVKEFEEALNAKSGVDSFVKIFPK-VAHGWTVRYNVEDETAVKAAEEAHHNLLEWFAK 235 (238)
Q Consensus 159 ~~~~P~L~i~g~~D~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g-~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~ 235 (238)
++++|+|+|+|++|.++|++..+++.+.++ ..+.+.+++++++ .+|..... ..++..+.+.+||++
T Consensus 321 ~I~~PtLvI~G~~D~l~p~~~~~~la~~lp-~~~~~a~l~~I~s~~GH~~~le----------~p~~~~~~I~~FL~~ 387 (389)
T PRK06765 321 NIEANVLMIPCKQDLLQPPRYNYKMVDILQ-KQGKYAEVYEIESINGHMAGVF----------DIHLFEKKIYEFLNR 387 (389)
T ss_pred cCCCCEEEEEeCCCCCCCHHHHHHHHHHhh-hcCCCeEEEEECCCCCcchhhc----------CHHHHHHHHHHHHcc
Confidence 578999999999999999999999998883 3334678888985 78987542 235778889999876
No 103
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=99.36 E-value=2.7e-12 Score=100.12 Aligned_cols=129 Identities=21% Similarity=0.334 Sum_probs=93.1
Q ss_pred CEEEeccCCCCCccCCCCCcchHhhHhhcCCCcchhcHHHHHHHHHhc-CCceEEEEEeeccHHHHHHcc-CCc-CceEE
Q 026476 68 FYVAVPDFFHGDPYVADGGKPLQEWIKDHGVDKGFEEAKPVIQALKSK-GITAIGAAGFCWGAKVVVQLG-KRE-FIQAA 144 (238)
Q Consensus 68 ~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~-~~~~i~l~G~S~GG~~a~~~a-~~~-~i~a~ 144 (238)
|.|+++|. ||.+.+... + ......-...|+.+.++.+.+. +.+++.++||||||.+++.++ ..| .++++
T Consensus 1 f~vi~~d~-rG~g~S~~~------~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vG~S~Gg~~~~~~a~~~p~~v~~l 72 (230)
T PF00561_consen 1 FDVILFDL-RGFGYSSPH------W-DPDFPDYTTDDLAADLEALREALGIKKINLVGHSMGGMLALEYAAQYPERVKKL 72 (230)
T ss_dssp EEEEEEEC-TTSTTSSSC------C-GSGSCTHCHHHHHHHHHHHHHHHTTSSEEEEEETHHHHHHHHHHHHSGGGEEEE
T ss_pred CEEEEEeC-CCCCCCCCC------c-cCCcccccHHHHHHHHHHHHHHhCCCCeEEEEECCChHHHHHHHHHCchhhcCc
Confidence 67999999 999887630 0 0001112335555555555444 677899999999999999987 455 69999
Q ss_pred EEeccC---------------CcC--------------------------------------------------------
Q 026476 145 VLLHPS---------------FVT-------------------------------------------------------- 153 (238)
Q Consensus 145 i~~~~~---------------~~~-------------------------------------------------------- 153 (238)
+++.+. ...
T Consensus 73 vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (230)
T PF00561_consen 73 VLISPPPDLPDGLWNRIWPRGNLQGQLLDNFFNFLSDPIKPLLGRWPKQFFAYDREFVEDFLKQFQSQQYARFAETDAFD 152 (230)
T ss_dssp EEESESSHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCHHHHHH
T ss_pred EEEeeeccchhhhhHHHHhhhhhhhhHHHhhhccccccchhhhhhhhhheeeccCccccchhhccchhhhhHHHHHHHHh
Confidence 888774 000
Q ss_pred ---------------cccccccCCcEEEEecCCCCCCCHHhHHHHHHHHhhcCCCCceEEEcCCCCeeeee
Q 026476 154 ---------------VDDIKGVEVPLSILGAEIDRLSPPALVKEFEEALNAKSGVDSFVKIFPKVAHGWTV 209 (238)
Q Consensus 154 ---------------~~~~~~~~~P~L~i~g~~D~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~H~~~~ 209 (238)
...+.++++|+|+++|++|.++|++....+.+.+. +.+++++++++|....
T Consensus 153 ~~~~~~~~~~~~~~~~~~l~~i~~p~l~i~~~~D~~~p~~~~~~~~~~~~-----~~~~~~~~~~GH~~~~ 218 (230)
T PF00561_consen 153 NMFWNALGYFSVWDPSPALSNIKVPTLIIWGEDDPLVPPESSEQLAKLIP-----NSQLVLIEGSGHFAFL 218 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTTSEEEEEEETTCSSSHHHHHHHHHHHST-----TEEEEEETTCCSTHHH
T ss_pred hhccccccccccccccccccccCCCeEEEEeCCCCCCCHHHHHHHHHhcC-----CCEEEECCCCChHHHh
Confidence 00156789999999999999999999998777662 4678899998998754
No 104
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=99.36 E-value=4e-11 Score=100.47 Aligned_cols=188 Identities=16% Similarity=0.079 Sum_probs=124.0
Q ss_pred eeEEEecCCC-C----CeeEEEEeccCCCCCchHHHHHHHHHHCCCEEEeccCCCCCccCCCCCcchHhhHhhcCCCcch
Q 026476 28 LNAYVTGSPD-S----KLAVLLISDVYGYEAPNLRKLADKVAAAGFYVAVPDFFHGDPYVADGGKPLQEWIKDHGVDKGF 102 (238)
Q Consensus 28 ~~~~~~~p~~-~----~~~vl~~hg~~g~~~~~~~~~a~~l~~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 102 (238)
+..+.+.|.. + .|+||++....|......+.+.+.|.. |+.|++.|+ +....... .....+.+.++
T Consensus 86 ~~L~~y~~~~~~~~~~~~pvLiV~Pl~g~~~~L~RS~V~~Ll~-g~dVYl~DW--~~p~~vp~------~~~~f~ldDYi 156 (406)
T TIGR01849 86 CRLIHFKRQGFRAELPGPAVLIVAPMSGHYATLLRSTVEALLP-DHDVYITDW--VNARMVPL------SAGKFDLEDYI 156 (406)
T ss_pred eEEEEECCCCcccccCCCcEEEEcCCchHHHHHHHHHHHHHhC-CCcEEEEeC--CCCCCCch------hcCCCCHHHHH
Confidence 5566666652 1 268999998877554556899999999 999999997 33321100 00122333344
Q ss_pred hcHHHHHHHHHhcCCceEEEEEeeccHHHHHHcc-----CC-c-CceEEEEeccCCcC----------------------
Q 026476 103 EEAKPVIQALKSKGITAIGAAGFCWGAKVVVQLG-----KR-E-FIQAAVLLHPSFVT---------------------- 153 (238)
Q Consensus 103 ~d~~~~~~~l~~~~~~~i~l~G~S~GG~~a~~~a-----~~-~-~i~a~i~~~~~~~~---------------------- 153 (238)
+-+.++++. .+.+ +.++|+|+||.+++.++ .. | .++..+++.++...
T Consensus 157 ~~l~~~i~~---~G~~-v~l~GvCqgG~~~laa~Al~a~~~~p~~~~sltlm~~PID~~~~p~~v~~~a~~~~i~~~~~~ 232 (406)
T TIGR01849 157 DYLIEFIRF---LGPD-IHVIAVCQPAVPVLAAVALMAENEPPAQPRSMTLMGGPIDARASPTVVNELAREKPIEWFQHN 232 (406)
T ss_pred HHHHHHHHH---hCCC-CcEEEEchhhHHHHHHHHHHHhcCCCCCcceEEEEecCccCCCCCchHHHHhhcccHHHHHHH
Confidence 334444443 3555 99999999999977543 11 2 47777766432110
Q ss_pred --------------------------------------------------------------------------------
Q 026476 154 -------------------------------------------------------------------------------- 153 (238)
Q Consensus 154 -------------------------------------------------------------------------------- 153 (238)
T Consensus 233 ~i~~vp~~~~g~gr~v~PG~~~~~~F~~mnp~r~~~~~~~~~~~l~~gd~~~~~~~~~f~~~y~d~~dlpge~y~~~v~~ 312 (406)
T TIGR01849 233 VIMRVPFPYPGAGRLVYPGFLQLAGFISMNLDRHTKAHSDFFLHLVKGDGQEADKHRIFYDEYLAVMDMTAEFYLQTIDV 312 (406)
T ss_pred hhhccCccccCCCCcccCHHHHHHHHHHcCcchHHHHHHHHHHHHhcCCcchHHHHHHHHHHhhhccCCcHHHHHHHHHH
Confidence
Q ss_pred -----------------cccccccC-CcEEEEecCCCCCCCHHhHHHHHHHHhhcCCCCceEEEcCCCCe-eeeecCCCC
Q 026476 154 -----------------VDDIKGVE-VPLSILGAEIDRLSPPALVKEFEEALNAKSGVDSFVKIFPKVAH-GWTVRYNVE 214 (238)
Q Consensus 154 -----------------~~~~~~~~-~P~L~i~g~~D~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~H-~~~~~~~~~ 214 (238)
.-++++|+ +|+|.+.|++|.++|++++..+.+.+..-+...++.+..+++|| |......
T Consensus 313 vf~~n~L~~G~l~v~G~~Vdl~~I~~~pll~V~ge~D~I~p~~qt~aa~~l~~~~~s~~k~~~~~~~~GH~Gvf~G~r-- 390 (406)
T TIGR01849 313 VFQQFLLPQGKFIVEGKRVDPGAITRVALLTVEGENDDISGLGQTKAALRLCTGIPEDMKRHHLQPGVGHYGVFSGSR-- 390 (406)
T ss_pred HHHhCCccCCcEEECCEEecHHHCcccceEEEeccCCCcCCHHHhHHHHHHhhcCChhhceEeecCCCCeEEEeeChh--
Confidence 00167888 99999999999999999999999986211222455666656788 5555432
Q ss_pred CHHHHHHHHHHHHHHHHHHHHh
Q 026476 215 DETAVKAAEEAHHNLLEWFAKY 236 (238)
Q Consensus 215 ~~~~~~~~~~~~~~~~~fl~~~ 236 (238)
..++.|..+.+||.++
T Consensus 391 ------~~~~i~P~i~~wl~~~ 406 (406)
T TIGR01849 391 ------FREEIYPLVREFIRRN 406 (406)
T ss_pred ------hhhhhchHHHHHHHhC
Confidence 5688999999999874
No 105
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=99.36 E-value=1.8e-11 Score=92.62 Aligned_cols=149 Identities=15% Similarity=0.117 Sum_probs=94.2
Q ss_pred EEEEeccCCCC-CchHHHHHHHHHHCC--CEEEeccCCCCCccCCCCCcchHhhHhhcCCCcchhcHHHHHHHHHhcCCc
Q 026476 42 VLLISDVYGYE-APNLRKLADKVAAAG--FYVAVPDFFHGDPYVADGGKPLQEWIKDHGVDKGFEEAKPVIQALKSKGIT 118 (238)
Q Consensus 42 vl~~hg~~g~~-~~~~~~~a~~l~~~G--~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~ 118 (238)
||.+||..++. ......+.+.+++.+ ..+.+|+. +-. +...++ .+.+.+.+...+
T Consensus 2 ilYlHGF~Ssp~S~Ka~~l~~~~~~~~~~~~~~~p~l-~~~------------------p~~a~~---~l~~~i~~~~~~ 59 (187)
T PF05728_consen 2 ILYLHGFNSSPQSFKAQALKQYFAEHGPDIQYPCPDL-PPF------------------PEEAIA---QLEQLIEELKPE 59 (187)
T ss_pred eEEecCCCCCCCCHHHHHHHHHHHHhCCCceEECCCC-CcC------------------HHHHHH---HHHHHHHhCCCC
Confidence 68899977643 122346777788765 45677776 111 111222 233334444445
Q ss_pred eEEEEEeeccHHHHHHccCCcCceEEEEeccCCcCc--------------------------cc-----c--cccCCcEE
Q 026476 119 AIGAAGFCWGAKVVVQLGKREFIQAAVLLHPSFVTV--------------------------DD-----I--KGVEVPLS 165 (238)
Q Consensus 119 ~i~l~G~S~GG~~a~~~a~~~~i~a~i~~~~~~~~~--------------------------~~-----~--~~~~~P~L 165 (238)
.+.++|.|+||..|..++....+++ |++.|...+. .. . .....+++
T Consensus 60 ~~~liGSSlGG~~A~~La~~~~~~a-vLiNPav~p~~~l~~~iG~~~~~~~~e~~~~~~~~~~~l~~l~~~~~~~~~~~l 138 (187)
T PF05728_consen 60 NVVLIGSSLGGFYATYLAERYGLPA-VLINPAVRPYELLQDYIGEQTNPYTGESYELTEEHIEELKALEVPYPTNPERYL 138 (187)
T ss_pred CeEEEEEChHHHHHHHHHHHhCCCE-EEEcCCCCHHHHHHHhhCccccCCCCccceechHhhhhcceEeccccCCCccEE
Confidence 6999999999999999997667777 6666654310 00 1 12345899
Q ss_pred EEecCCCCCCCHHhHHHHHHHHhhcCCCCceEEEcCCCCeeeeecCCCCCHHHHHHHHHHHHHHHHHH
Q 026476 166 ILGAEIDRLSPPALVKEFEEALNAKSGVDSFVKIFPKVAHGWTVRYNVEDETAVKAAEEAHHNLLEWF 233 (238)
Q Consensus 166 ~i~g~~D~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl 233 (238)
+++++.|++++.+.+...++ + ....+.+|++|.|.+ .++....+.+|+
T Consensus 139 vll~~~DEvLd~~~a~~~~~------~--~~~~i~~ggdH~f~~------------f~~~l~~i~~f~ 186 (187)
T PF05728_consen 139 VLLQTGDEVLDYREAVAKYR------G--CAQIIEEGGDHSFQD------------FEEYLPQIIAFL 186 (187)
T ss_pred EEEecCCcccCHHHHHHHhc------C--ceEEEEeCCCCCCcc------------HHHHHHHHHHhh
Confidence 99999999998854433332 1 223355677999964 467888899887
No 106
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=99.34 E-value=1.3e-11 Score=98.65 Aligned_cols=187 Identities=22% Similarity=0.284 Sum_probs=78.9
Q ss_pred eeEEEecCCC--CCeeEEEEeccC-C-CCCchHHHHHHHHHHCCCEEEeccCC---CCCccCCCCCcchHhhHhhcCCCc
Q 026476 28 LNAYVTGSPD--SKLAVLLISDVY-G-YEAPNLRKLADKVAAAGFYVAVPDFF---HGDPYVADGGKPLQEWIKDHGVDK 100 (238)
Q Consensus 28 ~~~~~~~p~~--~~~~vl~~hg~~-g-~~~~~~~~~a~~l~~~G~~v~~~d~~---~g~~~~~~~~~~~~~~~~~~~~~~ 100 (238)
+.+|-+.+.. ....|||+-|.. | ...+++..+++.|...||.++-+.+. .|.|.+ ..++
T Consensus 20 ~~afe~~~~~~~~~~~llfIGGLtDGl~tvpY~~~La~aL~~~~wsl~q~~LsSSy~G~G~~--------------SL~~ 85 (303)
T PF08538_consen 20 LVAFEFTSSSSSAPNALLFIGGLTDGLLTVPYLPDLAEALEETGWSLFQVQLSSSYSGWGTS--------------SLDR 85 (303)
T ss_dssp TEEEEEEEE-TTSSSEEEEE--TT--TT-STCHHHHHHHHT-TT-EEEEE--GGGBTTS-S----------------HHH
T ss_pred CeEEEecCCCCCCCcEEEEECCCCCCCCCCchHHHHHHHhccCCeEEEEEEecCccCCcCcc--------------hhhh
Confidence 5555554432 334566666644 2 22467889999998889999998872 222211 2345
Q ss_pred chhcHHHHHHHHHhc-----CCceEEEEEeeccHHHHHHccC-------CcCceEEEEeccCCcC---------------
Q 026476 101 GFEEAKPVIQALKSK-----GITAIGAAGFCWGAKVVVQLGK-------REFIQAAVLLHPSFVT--------------- 153 (238)
Q Consensus 101 ~~~d~~~~~~~l~~~-----~~~~i~l~G~S~GG~~a~~~a~-------~~~i~a~i~~~~~~~~--------------- 153 (238)
.++|+.+++++++.. +.++|+|+|||-|..-++.+.. .+.|+++|+-.|.-..
T Consensus 86 D~~eI~~~v~ylr~~~~g~~~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVSDREa~~~~~~~~~~~~~ 165 (303)
T PF08538_consen 86 DVEEIAQLVEYLRSEKGGHFGREKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVSDREAILNFLGEREAYEE 165 (303)
T ss_dssp HHHHHHHHHHHHHHHS------S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE---TTSTTTSHHH---HHH
T ss_pred HHHHHHHHHHHHHHhhccccCCccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCCChhHhhhcccchHHHHH
Confidence 678999999999987 4679999999999999999762 2468888876442110
Q ss_pred -----------------------------------------------------------cccccccCCcEEEEecCCCCC
Q 026476 154 -----------------------------------------------------------VDDIKGVEVPLSILGAEIDRL 174 (238)
Q Consensus 154 -----------------------------------------------------------~~~~~~~~~P~L~i~g~~D~~ 174 (238)
...+.++..|+|++.+++|++
T Consensus 166 ~v~~A~~~i~~g~~~~~lp~~~~~~~~~~~PiTA~Rf~SL~s~~gdDD~FSSDL~de~l~~tfG~v~~plLvl~Sg~DEy 245 (303)
T PF08538_consen 166 LVALAKELIAEGKGDEILPREFTPLVFYDTPITAYRFLSLASPGGDDDYFSSDLSDERLKKTFGKVSKPLLVLYSGKDEY 245 (303)
T ss_dssp HHHHHHHHHHCT-TT-GG----GGTTT-SS---HHHHHT-S-SSHHHHTHHHHHTT-HHHHTGGG--S-EEEEEE--TT-
T ss_pred HHHHHHHHHHcCCCCceeeccccccccCCCcccHHHHHhccCCCCcccccCCCCCHHHHHHHhccCCCceEEEecCCCce
Confidence 011567788999999999999
Q ss_pred CCHHh-HHHHHHHHhhcCC---CCceEEEcCCCCeeeeecCCCCCHHHHHHHHHHHHHHHHHHH
Q 026476 175 SPPAL-VKEFEEALNAKSG---VDSFVKIFPKVAHGWTVRYNVEDETAVKAAEEAHHNLLEWFA 234 (238)
Q Consensus 175 ~p~~~-~~~~~~~~~~~~~---~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~ 234 (238)
+|... .+++.+.++...+ ....-.++||+.|.+..+... ...+.+.+++..||+
T Consensus 246 vP~~vdk~~Ll~rw~~a~~~~~~s~~S~iI~GA~H~~~~~~~~------~~~~~l~~rV~~fl~ 303 (303)
T PF08538_consen 246 VPPWVDKEALLERWKAATNPKIWSPLSGIIPGASHNVSGPSQA------EAREWLVERVVKFLK 303 (303)
T ss_dssp ----------------------------------------------------------------
T ss_pred ecccccccccccccccccccccccccccccccccccccccccc------cccccccccccccCC
Confidence 98753 3344444422222 122345799999999765433 135678888998885
No 107
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=99.33 E-value=3.4e-11 Score=90.03 Aligned_cols=136 Identities=15% Similarity=0.109 Sum_probs=92.2
Q ss_pred EEEEeccCCC-CCchHHHHHHHHHHCCCEEEeccCCCCCccCCCCCcchHhhHhhcCCCcchhcHHHHHHHHHhc---CC
Q 026476 42 VLLISDVYGY-EAPNLRKLADKVAAAGFYVAVPDFFHGDPYVADGGKPLQEWIKDHGVDKGFEEAKPVIQALKSK---GI 117 (238)
Q Consensus 42 vl~~hg~~g~-~~~~~~~~a~~l~~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~---~~ 117 (238)
|+++||..|+ ...++..+.+.|... +.|-.++.. .-+..++++.+++. ..
T Consensus 1 v~IvhG~~~s~~~HW~~wl~~~l~~~-~~V~~~~~~-------------------------~P~~~~W~~~l~~~i~~~~ 54 (171)
T PF06821_consen 1 VLIVHGYGGSPPDHWQPWLERQLENS-VRVEQPDWD-------------------------NPDLDEWVQALDQAIDAID 54 (171)
T ss_dssp EEEE--TTSSTTTSTHHHHHHHHTTS-EEEEEC--T-------------------------S--HHHHHHHHHHCCHC-T
T ss_pred CEEeCCCCCCCccHHHHHHHHhCCCC-eEEeccccC-------------------------CCCHHHHHHHHHHHHhhcC
Confidence 6889998764 245677888888887 777777750 01344555555544 23
Q ss_pred ceEEEEEeeccHHHHHHcc-C--CcCceEEEEeccCCcC-c----c--------cccccCCcEEEEecCCCCCCCHHhHH
Q 026476 118 TAIGAAGFCWGAKVVVQLG-K--REFIQAAVLLHPSFVT-V----D--------DIKGVEVPLSILGAEIDRLSPPALVK 181 (238)
Q Consensus 118 ~~i~l~G~S~GG~~a~~~a-~--~~~i~a~i~~~~~~~~-~----~--------~~~~~~~P~L~i~g~~D~~~p~~~~~ 181 (238)
+++.++|||+|..+++.++ . ..+|++++++.|.-.. . . .......|.++|.+++|+++|.+.++
T Consensus 55 ~~~ilVaHSLGc~~~l~~l~~~~~~~v~g~lLVAp~~~~~~~~~~~~~~~f~~~p~~~l~~~~~viaS~nDp~vp~~~a~ 134 (171)
T PF06821_consen 55 EPTILVAHSLGCLTALRWLAEQSQKKVAGALLVAPFDPDDPEPFPPELDGFTPLPRDPLPFPSIVIASDNDPYVPFERAQ 134 (171)
T ss_dssp TTEEEEEETHHHHHHHHHHHHTCCSSEEEEEEES--SCGCHHCCTCGGCCCTTSHCCHHHCCEEEEEETTBSSS-HHHHH
T ss_pred CCeEEEEeCHHHHHHHHHHhhcccccccEEEEEcCCCcccccchhhhccccccCcccccCCCeEEEEcCCCCccCHHHHH
Confidence 5689999999999999977 3 3489999998876432 0 0 12234568899999999999999999
Q ss_pred HHHHHHhhcCCCCceEEEcCCCCeeeee
Q 026476 182 EFEEALNAKSGVDSFVKIFPKVAHGWTV 209 (238)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~g~~H~~~~ 209 (238)
++.+.+ +.++..++++||-...
T Consensus 135 ~~A~~l------~a~~~~~~~~GHf~~~ 156 (171)
T PF06821_consen 135 RLAQRL------GAELIILGGGGHFNAA 156 (171)
T ss_dssp HHHHHH------T-EEEEETS-TTSSGG
T ss_pred HHHHHc------CCCeEECCCCCCcccc
Confidence 999998 4568899999997654
No 108
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.32 E-value=6.4e-11 Score=88.90 Aligned_cols=179 Identities=15% Similarity=0.233 Sum_probs=113.2
Q ss_pred eeEEEEeccCCCCCchHHHHHHHHHHCCCEEEeccCCCCCccCCCCCcchHhhHhhcCCC----cchhcHHH-------H
Q 026476 40 LAVLLISDVYGYEAPNLRKLADKVAAAGFYVAVPDFFHGDPYVADGGKPLQEWIKDHGVD----KGFEEAKP-------V 108 (238)
Q Consensus 40 ~~vl~~hg~~g~~~~~~~~~a~~l~~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~----~~~~d~~~-------~ 108 (238)
..||++||...+. ..+..+...+.-....-++|..+ -...+...+..+..|.+..... ...+.+.. +
T Consensus 4 atIi~LHglGDsg-~~~~~~~~~l~l~NiKwIcP~aP-~rpvt~~~G~~~~aWfd~~~~~~~~~~d~~~~~~aa~~i~~L 81 (206)
T KOG2112|consen 4 ATIIFLHGLGDSG-SGWAQFLKQLPLPNIKWICPTAP-SRPVTLNGGAFMNAWFDIMELSSDAPEDEEGLHRAADNIANL 81 (206)
T ss_pred EEEEEEecCCCCC-ccHHHHHHcCCCCCeeEEcCCCC-CCcccccCCCcccceecceeeCcccchhhhHHHHHHHHHHHH
Confidence 4688899876554 44555666655567888888663 2222221122223344433221 11112222 2
Q ss_pred HHHHHhc--CCceEEEEEeeccHHHHHHcc-CCc-CceEEEEeccCCcCc-ccccc-----cCCcEEEEecCCCCCCCHH
Q 026476 109 IQALKSK--GITAIGAAGFCWGAKVVVQLG-KRE-FIQAAVLLHPSFVTV-DDIKG-----VEVPLSILGAEIDRLSPPA 178 (238)
Q Consensus 109 ~~~l~~~--~~~~i~l~G~S~GG~~a~~~a-~~~-~i~a~i~~~~~~~~~-~~~~~-----~~~P~L~i~g~~D~~~p~~ 178 (238)
++.-.+. +.++|.+-|+||||.+++..+ ..+ .+..++..++..... ..++. ...|++.-||+.|+++|..
T Consensus 82 i~~e~~~Gi~~~rI~igGfs~G~a~aL~~~~~~~~~l~G~~~~s~~~p~~~~~~~~~~~~~~~~~i~~~Hg~~d~~vp~~ 161 (206)
T KOG2112|consen 82 IDNEPANGIPSNRIGIGGFSQGGALALYSALTYPKALGGIFALSGFLPRASIGLPGWLPGVNYTPILLCHGTADPLVPFR 161 (206)
T ss_pred HHHHHHcCCCccceeEcccCchHHHHHHHHhccccccceeeccccccccchhhccCCccccCcchhheecccCCceeehH
Confidence 2222222 467999999999999999977 443 455555555544321 11111 1679999999999999999
Q ss_pred hHHHHHHHHhhcCCCCceEEEcCCCCeeeeecCCCCCHHHHHHHHHHHHHHHHHHHH
Q 026476 179 LVKEFEEALNAKSGVDSFVKIFPKVAHGWTVRYNVEDETAVKAAEEAHHNLLEWFAK 235 (238)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~ 235 (238)
-.+...+.+ ...+..++++.|+|.+|.... +-++++..|+++
T Consensus 162 ~g~~s~~~l-~~~~~~~~f~~y~g~~h~~~~--------------~e~~~~~~~~~~ 203 (206)
T KOG2112|consen 162 FGEKSAQFL-KSLGVRVTFKPYPGLGHSTSP--------------QELDDLKSWIKT 203 (206)
T ss_pred HHHHHHHHH-HHcCCceeeeecCCccccccH--------------HHHHHHHHHHHH
Confidence 999999988 566778999999999999753 566777888876
No 109
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.31 E-value=1.3e-10 Score=90.07 Aligned_cols=163 Identities=16% Similarity=0.218 Sum_probs=106.3
Q ss_pred eeEEEecCC--CCCeeEEEEeccCCCCCchHHHHHHHHHHCCCEEEeccCCCCCccCCCCCcchHhhHhhcCCCcchhcH
Q 026476 28 LNAYVTGSP--DSKLAVLLISDVYGYEAPNLRKLADKVAAAGFYVAVPDFFHGDPYVADGGKPLQEWIKDHGVDKGFEEA 105 (238)
Q Consensus 28 ~~~~~~~p~--~~~~~vl~~hg~~g~~~~~~~~~a~~l~~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~ 105 (238)
.+..+..|+ ++-|.|+|+||+.-.+ .+|..+-++++++||.|++|+.+...+ ..+ ...++++
T Consensus 33 kpLlI~tP~~~G~yPVilF~HG~~l~n-s~Ys~lL~HIASHGfIVVAPQl~~~~~-p~~--------------~~Ei~~a 96 (307)
T PF07224_consen 33 KPLLIVTPSEAGTYPVILFLHGFNLYN-SFYSQLLAHIASHGFIVVAPQLYTLFP-PDG--------------QDEIKSA 96 (307)
T ss_pred CCeEEecCCcCCCccEEEEeechhhhh-HHHHHHHHHHhhcCeEEEechhhcccC-CCc--------------hHHHHHH
Confidence 456667776 3457888888876654 789999999999999999999953222 111 1234667
Q ss_pred HHHHHHHHhc-----------CCceEEEEEeeccHHHHHHccCCc----CceEEEEeccCCcC-------c------ccc
Q 026476 106 KPVIQALKSK-----------GITAIGAAGFCWGAKVVVQLGKRE----FIQAAVLLHPSFVT-------V------DDI 157 (238)
Q Consensus 106 ~~~~~~l~~~-----------~~~~i~l~G~S~GG~~a~~~a~~~----~i~a~i~~~~~~~~-------~------~~~ 157 (238)
.++++|+.+. +..+++++|||.||.+|..+|... .+.+.|.+.|..-. + ..-
T Consensus 97 a~V~~WL~~gL~~~Lp~~V~~nl~klal~GHSrGGktAFAlALg~a~~lkfsaLIGiDPV~G~~k~~~t~P~iLty~p~S 176 (307)
T PF07224_consen 97 ASVINWLPEGLQHVLPENVEANLSKLALSGHSRGGKTAFALALGYATSLKFSALIGIDPVAGTSKGKQTPPPILTYVPQS 176 (307)
T ss_pred HHHHHHHHhhhhhhCCCCcccccceEEEeecCCccHHHHHHHhcccccCchhheecccccCCCCCCCCCCCCeeecCCcc
Confidence 7778887643 357999999999999999988432 46677766553211 0 122
Q ss_pred cccCCcEEEEecCCC-------CCCCHH--hHHHHHHHHhhcCCCCceEEEcCCCCeeeeec
Q 026476 158 KGVEVPLSILGAEID-------RLSPPA--LVKEFEEALNAKSGVDSFVKIFPKVAHGWTVR 210 (238)
Q Consensus 158 ~~~~~P~L~i~g~~D-------~~~p~~--~~~~~~~~~~~~~~~~~~~~~~~g~~H~~~~~ 210 (238)
.++..|+++|-..-- +-+.++ .-++++.+++ . +.-..+-.+-||.-+.+
T Consensus 177 F~l~iPv~VIGtGLg~~~~~~~~~CaP~gvnH~eFf~eCk-~---p~~hfV~~dYGHmDmLD 234 (307)
T PF07224_consen 177 FDLDIPVLVIGTGLGPKRNPLFPPCAPDGVNHEEFFNECK-P---PCAHFVAKDYGHMDMLD 234 (307)
T ss_pred cccCCceEEEecCcCccccCCCCCCCCCCcCHHHHHHhhc-c---cceeeeecccccccccc
Confidence 356789999876444 223333 3566777773 2 33344555677865543
No 110
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=99.31 E-value=2.4e-11 Score=98.95 Aligned_cols=158 Identities=22% Similarity=0.341 Sum_probs=104.9
Q ss_pred eEEEEeccCCCCCchHHHHHHHHHHCCCEEEeccCCCCCcc--CCCC--C---cchHhhHhhcCCCcchhcHHHHHHHHH
Q 026476 41 AVLLISDVYGYEAPNLRKLADKVAAAGFYVAVPDFFHGDPY--VADG--G---KPLQEWIKDHGVDKGFEEAKPVIQALK 113 (238)
Q Consensus 41 ~vl~~hg~~g~~~~~~~~~a~~l~~~G~~v~~~d~~~g~~~--~~~~--~---~~~~~~~~~~~~~~~~~d~~~~~~~l~ 113 (238)
+||++.|+.|.....+..+++++++.||.|..+++ .|... .+.. . ..-.+|. +...|+..+++++.
T Consensus 72 PlvvlshG~Gs~~~~f~~~A~~lAs~Gf~Va~~~h-pgs~~~~~~~~~~~~~~~~p~~~~------erp~dis~lLd~L~ 144 (365)
T COG4188 72 PLVVLSHGSGSYVTGFAWLAEHLASYGFVVAAPDH-PGSNAGGAPAAYAGPGSYAPAEWW------ERPLDISALLDALL 144 (365)
T ss_pred CeEEecCCCCCCccchhhhHHHHhhCceEEEeccC-CCcccccCChhhcCCcccchhhhh------cccccHHHHHHHHH
Confidence 45555555555467899999999999999999999 66421 1111 0 0111232 34578888888886
Q ss_pred hc----------CCceEEEEEeeccHHHHHHccC-C--------------------------------------------
Q 026476 114 SK----------GITAIGAAGFCWGAKVVVQLGK-R-------------------------------------------- 138 (238)
Q Consensus 114 ~~----------~~~~i~l~G~S~GG~~a~~~a~-~-------------------------------------------- 138 (238)
++ +..+|+++|||+||+.++.++. +
T Consensus 145 ~~~~sP~l~~~ld~~~Vgv~GhS~GG~T~m~laGA~~~~~~~~~~C~~~~~~~~~~~~~~~~~l~q~~av~~~~~~~~~r 224 (365)
T COG4188 145 QLTASPALAGRLDPQRVGVLGHSFGGYTAMELAGAELDAEALLQHCESASRICLDPPGLNGRLLNQCAAVWLPRQAYDLR 224 (365)
T ss_pred HhhcCcccccccCccceEEEecccccHHHHHhccccccHHHHHHHhhhhhhcccCCCCcChhhhccccccccchhhhccc
Confidence 65 3579999999999999998762 1
Q ss_pred -cCceEEEEeccCC---cCcccccccCCcEEEEecCCCCCCCHH-hHHHHHHHHhhcCCCCceEEEcCCCCeeee
Q 026476 139 -EFIQAAVLLHPSF---VTVDDIKGVEVPLSILGAEIDRLSPPA-LVKEFEEALNAKSGVDSFVKIFPKVAHGWT 208 (238)
Q Consensus 139 -~~i~a~i~~~~~~---~~~~~~~~~~~P~L~i~g~~D~~~p~~-~~~~~~~~~~~~~~~~~~~~~~~g~~H~~~ 208 (238)
++|++++++.+.. ....-+.+++.|++++.|..|.+.|+. ........+ .+....+...+++.|--.
T Consensus 225 DpriravvA~~p~~~~~Fg~tgl~~v~~P~~~~a~s~D~~aP~~~~~~~~f~~l---~g~~k~~~~vp~a~h~sf 296 (365)
T COG4188 225 DPRIRAVVAINPALGMIFGTTGLVKVTDPVLLAAGSADGFAPPVTEQIRPFGYL---PGALKYLRLVPGATHFSF 296 (365)
T ss_pred cccceeeeeccCCcccccccccceeeecceeeecccccccCCcccccccccccC---CcchhheeecCCCccccc
Confidence 1344444444322 223447788999999999999987664 344444444 344455778888899443
No 111
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=99.28 E-value=8.1e-11 Score=95.55 Aligned_cols=63 Identities=21% Similarity=0.302 Sum_probs=52.0
Q ss_pred CCcEEEEecCCCCCCCHHhHHHHHHHHhhcCC-CCceEEEcCCCCeeeeecCCCCCHHHHHHHHHHHHHHHHHHHHhc
Q 026476 161 EVPLSILGAEIDRLSPPALVKEFEEALNAKSG-VDSFVKIFPKVAHGWTVRYNVEDETAVKAAEEAHHNLLEWFAKYV 237 (238)
Q Consensus 161 ~~P~L~i~g~~D~~~p~~~~~~~~~~~~~~~~-~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~ 237 (238)
+.|+++.+|..|.++|....+++.+.+ .+.| .+++++.+++.+|.-.. .......++||.+.+
T Consensus 219 ~~Pv~i~~g~~D~vvP~~~~~~l~~~~-c~~G~a~V~~~~~~~~~H~~~~-------------~~~~~~a~~Wl~~rf 282 (290)
T PF03583_consen 219 TVPVLIYQGTADEVVPPADTDALVAKW-CAAGGADVEYVRYPGGGHLGAA-------------FASAPDALAWLDDRF 282 (290)
T ss_pred CCCEEEEecCCCCCCChHHHHHHHHHH-HHcCCCCEEEEecCCCChhhhh-------------hcCcHHHHHHHHHHH
Confidence 679999999999999999999999999 5567 79999999999997632 234456778888765
No 112
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=99.26 E-value=2.7e-11 Score=94.15 Aligned_cols=165 Identities=18% Similarity=0.147 Sum_probs=83.6
Q ss_pred CCeeEEEEeccCCCCCchH----HHHHHHHHHCCCEEEeccCCCC----CccCCC---------CCcchHhhHhhcCCCc
Q 026476 38 SKLAVLLISDVYGYEAPNL----RKLADKVAAAGFYVAVPDFFHG----DPYVAD---------GGKPLQEWIKDHGVDK 100 (238)
Q Consensus 38 ~~~~vl~~hg~~g~~~~~~----~~~a~~l~~~G~~v~~~d~~~g----~~~~~~---------~~~~~~~~~~~~~~~~ 100 (238)
+++.||++||...+ ..-+ ..+...|.+.++..+.+|...- .+.... .......|........
T Consensus 3 ~k~riLcLHG~~~n-a~if~~q~~~l~~~l~~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~ 81 (212)
T PF03959_consen 3 RKPRILCLHGYGQN-AEIFRQQTSALRKALKKLDFEFVFVDGPHEVPPGPGIEPFSSEAESAFGDPGPFYSWWDPDDDDH 81 (212)
T ss_dssp ---EEEEE--TT---HHHHHHHTHHHHHHHHHTT-EEEEE--SEE---GGG-SS---HHHHHHHHTT--EESS---S-SG
T ss_pred CCceEEEeCCCCcC-HHHHHHHHHHHHHHHhhCcEEEEEecCCcccCCcccccccccccccccCCCCcceeeeecCCCcc
Confidence 35789999997654 2333 4566667665788888887311 111110 0112233443333222
Q ss_pred chhcHHHHHHHHHhc---CCceEEEEEeeccHHHHHHccC----------CcCceEEEEeccCCcCcc------cccccC
Q 026476 101 GFEEAKPVIQALKSK---GITAIGAAGFCWGAKVVVQLGK----------REFIQAAVLLHPSFVTVD------DIKGVE 161 (238)
Q Consensus 101 ~~~d~~~~~~~l~~~---~~~~i~l~G~S~GG~~a~~~a~----------~~~i~a~i~~~~~~~~~~------~~~~~~ 161 (238)
...++...++++.+. ...=.+++|||+||.+|..++. .+.++.+|++.|...... ...+++
T Consensus 82 ~~~~~~~sl~~l~~~i~~~GPfdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~p~~~~~~~~~~~~~i~ 161 (212)
T PF03959_consen 82 EYEGLDESLDYLRDYIEENGPFDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFPPPDPDYQELYDEPKIS 161 (212)
T ss_dssp GG---HHHHHHHHHHHHHH---SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES----EEE-GTTTT--TT--
T ss_pred cccCHHHHHHHHHHHHHhcCCeEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccCCCchhhhhhhccccCC
Confidence 334455555544432 1225789999999999998662 135889998877655322 134579
Q ss_pred CcEEEEecCCCCCCCHHhHHHHHHHHhhcCCCCceEEEcCCCCeeee
Q 026476 162 VPLSILGAEIDRLSPPALVKEFEEALNAKSGVDSFVKIFPKVAHGWT 208 (238)
Q Consensus 162 ~P~L~i~g~~D~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~H~~~ 208 (238)
+|+|-|+|++|.+++++..+.+.+.+... .++...+| +|.+-
T Consensus 162 iPtlHv~G~~D~~~~~~~s~~L~~~~~~~----~~v~~h~g-GH~vP 203 (212)
T PF03959_consen 162 IPTLHVIGENDPVVPPERSEALAEMFDPD----ARVIEHDG-GHHVP 203 (212)
T ss_dssp -EEEEEEETT-SSS-HHHHHHHHHHHHHH----EEEEEESS-SSS--
T ss_pred CCeEEEEeCCCCCcchHHHHHHHHhccCC----cEEEEECC-CCcCc
Confidence 99999999999999999999999998421 56778885 88874
No 113
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=99.24 E-value=3.3e-10 Score=87.78 Aligned_cols=145 Identities=10% Similarity=0.091 Sum_probs=87.9
Q ss_pred CCeeEEEEeccCCCCCchHHH--HHHHHHHC-CCEEEeccCCCCCccCCCCCcchHhhHhhcC--CCcchhcHHHHHHHH
Q 026476 38 SKLAVLLISDVYGYEAPNLRK--LADKVAAA-GFYVAVPDFFHGDPYVADGGKPLQEWIKDHG--VDKGFEEAKPVIQAL 112 (238)
Q Consensus 38 ~~~~vl~~hg~~g~~~~~~~~--~a~~l~~~-G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~--~~~~~~d~~~~~~~l 112 (238)
+.|.||++||..+.. ..+.. -...++++ ||.|+.|+.. ..... .....|..... -......+.++++.+
T Consensus 15 ~~PLVv~LHG~~~~a-~~~~~~s~~~~lAd~~GfivvyP~~~-~~~~~----~~cw~w~~~~~~~g~~d~~~i~~lv~~v 88 (220)
T PF10503_consen 15 PVPLVVVLHGCGQSA-EDFAAGSGWNALADREGFIVVYPEQS-RRANP----QGCWNWFSDDQQRGGGDVAFIAALVDYV 88 (220)
T ss_pred CCCEEEEeCCCCCCH-HHHHhhcCHHHHhhcCCeEEEccccc-ccCCC----CCcccccccccccCccchhhHHHHHHhH
Confidence 347888999987653 33221 11235554 9999999962 21111 11112222111 112234466667777
Q ss_pred Hhc---CCceEEEEEeeccHHHHHHcc-CCc-CceEEEEeccCCcC-------------------ccc-------c-ccc
Q 026476 113 KSK---GITAIGAAGFCWGAKVVVQLG-KRE-FIQAAVLLHPSFVT-------------------VDD-------I-KGV 160 (238)
Q Consensus 113 ~~~---~~~~i~l~G~S~GG~~a~~~a-~~~-~i~a~i~~~~~~~~-------------------~~~-------~-~~~ 160 (238)
..+ |.+||.+.|+|.||.++..++ ..| .+.++..+.|.... +.. . ..-
T Consensus 89 ~~~~~iD~~RVyv~G~S~Gg~ma~~la~~~pd~faa~a~~sG~~~~~a~~~~~a~~~m~~g~~~~p~~~~~a~~~~g~~~ 168 (220)
T PF10503_consen 89 AARYNIDPSRVYVTGLSNGGMMANVLACAYPDLFAAVAVVSGVPYGCAASGASALSAMRSGPRPAPAAAWGARSDAGAYP 168 (220)
T ss_pred hhhcccCCCceeeEEECHHHHHHHHHHHhCCccceEEEeecccccccccCcccHHHHhhCCCCCChHHHHHhhhhccCCC
Confidence 655 788999999999999999988 566 45555554443221 000 0 011
Q ss_pred CCcEEEEecCCCCCCCHHhHHHHHHHHh
Q 026476 161 EVPLSILGAEIDRLSPPALVKEFEEALN 188 (238)
Q Consensus 161 ~~P~L~i~g~~D~~~p~~~~~~~~~~~~ 188 (238)
..|++++||+.|..|.+...+++.+.+.
T Consensus 169 ~~P~~v~hG~~D~tV~~~n~~~~~~q~~ 196 (220)
T PF10503_consen 169 GYPRIVFHGTADTTVNPQNADQLVAQWL 196 (220)
T ss_pred CCCEEEEecCCCCccCcchHHHHHHHHH
Confidence 3599999999999999988888877763
No 114
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.22 E-value=1e-10 Score=92.17 Aligned_cols=129 Identities=15% Similarity=0.157 Sum_probs=76.8
Q ss_pred CCceEEeeC-CeeEEEecCCC---CCeeEEEEeccCCCCCchHHHHH--HHHHHC-CCEEEeccCCCCCccCCCCCcchH
Q 026476 18 GAGHVEKLG-GLNAYVTGSPD---SKLAVLLISDVYGYEAPNLRKLA--DKVAAA-GFYVAVPDFFHGDPYVADGGKPLQ 90 (238)
Q Consensus 18 ~~~~~~~~~-~~~~~~~~p~~---~~~~vl~~hg~~g~~~~~~~~~a--~~l~~~-G~~v~~~d~~~g~~~~~~~~~~~~ 90 (238)
...++...+ ....+++.|.+ +.|.||++||..++. ..+.... +.|++. ||.|+.||.+++....... .
T Consensus 36 ~~~s~~~~g~~r~y~l~vP~g~~~~apLvv~LHG~~~sg-ag~~~~sg~d~lAd~~gFlV~yPdg~~~~wn~~~~----~ 110 (312)
T COG3509 36 SVASFDVNGLKRSYRLYVPPGLPSGAPLVVVLHGSGGSG-AGQLHGTGWDALADREGFLVAYPDGYDRAWNANGC----G 110 (312)
T ss_pred CccccccCCCccceEEEcCCCCCCCCCEEEEEecCCCCh-HHhhcccchhhhhcccCcEEECcCccccccCCCcc----c
Confidence 344443333 36666777753 236789999988764 3444444 556655 9999999885444312111 1
Q ss_pred hhHhhcCC---CcchhcHHHHHHHHHhc---CCceEEEEEeeccHHHHHHcc-CCcCc-eEEEEeccCC
Q 026476 91 EWIKDHGV---DKGFEEAKPVIQALKSK---GITAIGAAGFCWGAKVVVQLG-KREFI-QAAVLLHPSF 151 (238)
Q Consensus 91 ~~~~~~~~---~~~~~d~~~~~~~l~~~---~~~~i~l~G~S~GG~~a~~~a-~~~~i-~a~i~~~~~~ 151 (238)
.|....+. ...+..+.++++.+..+ +..+|++.|.|.||.|+..++ ..+.+ .++..+.+..
T Consensus 111 ~~~~p~~~~~g~ddVgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~~faa~A~VAg~~ 179 (312)
T COG3509 111 NWFGPADRRRGVDDVGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYPDIFAAIAPVAGLL 179 (312)
T ss_pred ccCCcccccCCccHHHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCcccccceeeeeccc
Confidence 12111111 22334466666666555 567999999999999999988 54644 4444444443
No 115
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=99.22 E-value=2.2e-10 Score=85.46 Aligned_cols=159 Identities=18% Similarity=0.239 Sum_probs=109.2
Q ss_pred eeEEEEeccCCCCCchHHHHHHHHHHCCCEEEeccCCCCCccCCCCCcchHhhHhhcCCCcchhcHHHHHHHHHhc-CCc
Q 026476 40 LAVLLISDVYGYEAPNLRKLADKVAAAGFYVAVPDFFHGDPYVADGGKPLQEWIKDHGVDKGFEEAKPVIQALKSK-GIT 118 (238)
Q Consensus 40 ~~vl~~hg~~g~~~~~~~~~a~~l~~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~-~~~ 118 (238)
..+|++.|-.|++ ..-..+++.|+++|+.|+-+|. ..+-| .+.++++...|+.++++...++ +.+
T Consensus 3 t~~v~~SGDgGw~-~~d~~~a~~l~~~G~~VvGvds-l~Yfw------------~~rtP~~~a~Dl~~~i~~y~~~w~~~ 68 (192)
T PF06057_consen 3 TLAVFFSGDGGWR-DLDKQIAEALAKQGVPVVGVDS-LRYFW------------SERTPEQTAADLARIIRHYRARWGRK 68 (192)
T ss_pred EEEEEEeCCCCch-hhhHHHHHHHHHCCCeEEEech-HHHHh------------hhCCHHHHHHHHHHHHHHHHHHhCCc
Confidence 3578888888885 6668999999999999999997 22222 2446677889999999887776 788
Q ss_pred eEEEEEeeccHHHHHHcc-CC-----cCceEEEEeccCCc---------------------CcccccccC-CcEEEEecC
Q 026476 119 AIGAAGFCWGAKVVVQLG-KR-----EFIQAAVLLHPSFV---------------------TVDDIKGVE-VPLSILGAE 170 (238)
Q Consensus 119 ~i~l~G~S~GG~~a~~~a-~~-----~~i~a~i~~~~~~~---------------------~~~~~~~~~-~P~L~i~g~ 170 (238)
++.|+|+|+|+-+...+. +- .+|+.++++.+... ...++.++. .|+++|+|+
T Consensus 69 ~vvLiGYSFGADvlP~~~nrLp~~~r~~v~~v~Ll~p~~~~dFeihv~~wlg~~~~~~~~~~~pei~~l~~~~v~CiyG~ 148 (192)
T PF06057_consen 69 RVVLIGYSFGADVLPFIYNRLPAALRARVAQVVLLSPSTTADFEIHVSGWLGMGGDDAAYPVIPEIAKLPPAPVQCIYGE 148 (192)
T ss_pred eEEEEeecCCchhHHHHHhhCCHHHHhheeEEEEeccCCcceEEEEhhhhcCCCCCcccCCchHHHHhCCCCeEEEEEcC
Confidence 999999999998777644 32 36888887754321 112234443 499999998
Q ss_pred CCCCCCHHhHHHHHHHHhhcCCCCceEEEcCCCCeeeeecCCCCCHHHHHHHHHHHHHHHHHHH
Q 026476 171 IDRLSPPALVKEFEEALNAKSGVDSFVKIFPKVAHGWTVRYNVEDETAVKAAEEAHHNLLEWFA 234 (238)
Q Consensus 171 ~D~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~ 234 (238)
+|.-. .+.. + . ..+.+....|| +|-|..+ .+...+.+++-|+
T Consensus 149 ~E~d~---~cp~----l-~--~~~~~~i~lpG-gHHfd~d-----------y~~La~~Il~~l~ 190 (192)
T PF06057_consen 149 DEDDS---LCPS----L-R--QPGVEVIALPG-GHHFDGD-----------YDALAKRILDALK 190 (192)
T ss_pred CCCCC---cCcc----c-c--CCCcEEEEcCC-CcCCCCC-----------HHHHHHHHHHHHh
Confidence 87531 1111 2 1 22677889997 6666442 2455566666554
No 116
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=99.18 E-value=1.4e-09 Score=91.17 Aligned_cols=111 Identities=21% Similarity=0.266 Sum_probs=77.7
Q ss_pred CCCeeEEEEeccCCCCCchH-----HHHHHHHHHCCCEEEeccCCCCCccCCCC----CcchHhhHhhcCC-CcchhcHH
Q 026476 37 DSKLAVLLISDVYGYEAPNL-----RKLADKVAAAGFYVAVPDFFHGDPYVADG----GKPLQEWIKDHGV-DKGFEEAK 106 (238)
Q Consensus 37 ~~~~~vl~~hg~~g~~~~~~-----~~~a~~l~~~G~~v~~~d~~~g~~~~~~~----~~~~~~~~~~~~~-~~~~~d~~ 106 (238)
+++|+|++.||...+...+. ..++-.|+.+||.|+.-+. ||..++... .....++- +... +-...|+.
T Consensus 71 ~~rp~Vll~HGLl~sS~~Wv~n~p~~sLaf~LadaGYDVWLgN~-RGn~ySr~h~~l~~~~~~~FW-~FS~~Em~~yDLP 148 (403)
T KOG2624|consen 71 KKRPVVLLQHGLLASSSSWVLNGPEQSLAFLLADAGYDVWLGNN-RGNTYSRKHKKLSPSSDKEFW-DFSWHEMGTYDLP 148 (403)
T ss_pred CCCCcEEEeeccccccccceecCccccHHHHHHHcCCceeeecC-cCcccchhhcccCCcCCccee-ecchhhhhhcCHH
Confidence 56789999999776432222 5789999999999999999 887666543 11011110 1122 33667999
Q ss_pred HHHHHHHhc-CCceEEEEEeeccHHHHHHccC-Cc----CceEEEEecc
Q 026476 107 PVIQALKSK-GITAIGAAGFCWGAKVVVQLGK-RE----FIQAAVLLHP 149 (238)
Q Consensus 107 ~~~~~l~~~-~~~~i~l~G~S~GG~~a~~~a~-~~----~i~a~i~~~~ 149 (238)
+.++++.+. +.+++..+|||+|+.....+.+ +| +|+..+++.|
T Consensus 149 A~IdyIL~~T~~~kl~yvGHSQGtt~~fv~lS~~p~~~~kI~~~~aLAP 197 (403)
T KOG2624|consen 149 AMIDYILEKTGQEKLHYVGHSQGTTTFFVMLSERPEYNKKIKSFIALAP 197 (403)
T ss_pred HHHHHHHHhccccceEEEEEEccchhheehhcccchhhhhhheeeeecc
Confidence 999999776 6789999999999998888653 32 4777766654
No 117
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=99.18 E-value=5.2e-10 Score=92.26 Aligned_cols=163 Identities=18% Similarity=0.187 Sum_probs=112.2
Q ss_pred eeEEEecCCCC---CeeEEEEeccCCCC----CchHHHHHHHHHHCCCEEEeccCCCCCccCCCCCcchHhhHhhcCCCc
Q 026476 28 LNAYVTGSPDS---KLAVLLISDVYGYE----APNLRKLADKVAAAGFYVAVPDFFHGDPYVADGGKPLQEWIKDHGVDK 100 (238)
Q Consensus 28 ~~~~~~~p~~~---~~~vl~~hg~~g~~----~~~~~~~a~~l~~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~ 100 (238)
+....+.|... .+++|++|.+...- ...-+.+.+.+.++|..|+++++ +....... ..+.++
T Consensus 93 ~~liqy~p~~e~v~~~PlLiVpP~iNk~yi~Dl~~~~s~V~~l~~~g~~vfvIsw-~nPd~~~~----------~~~~ed 161 (445)
T COG3243 93 LELIQYKPLTEKVLKRPLLIVPPWINKFYILDLSPEKSLVRWLLEQGLDVFVISW-RNPDASLA----------AKNLED 161 (445)
T ss_pred hhhhccCCCCCccCCCceEeeccccCceeEEeCCCCccHHHHHHHcCCceEEEec-cCchHhhh----------hccHHH
Confidence 44555556432 36899999866421 11226899999999999999997 44332211 222233
Q ss_pred ch-hcHHHHHHHHHhc-CCceEEEEEeeccHHHHHHccC---CcCceEEEEeccCCcC----------------------
Q 026476 101 GF-EEAKPVIQALKSK-GITAIGAAGFCWGAKVVVQLGK---REFIQAAVLLHPSFVT---------------------- 153 (238)
Q Consensus 101 ~~-~d~~~~~~~l~~~-~~~~i~l~G~S~GG~~a~~~a~---~~~i~a~i~~~~~~~~---------------------- 153 (238)
++ +++..+++.+++. +.++|-++|+|.||.++..+++ ..+|+....+......
T Consensus 162 Yi~e~l~~aid~v~~itg~~~InliGyCvGGtl~~~ala~~~~k~I~S~T~lts~~DF~~~g~l~if~n~~~~~~~~~~i 241 (445)
T COG3243 162 YILEGLSEAIDTVKDITGQKDINLIGYCVGGTLLAAALALMAAKRIKSLTLLTSPVDFSHAGDLGIFANEATIEALDADI 241 (445)
T ss_pred HHHHHHHHHHHHHHHHhCccccceeeEecchHHHHHHHHhhhhcccccceeeecchhhccccccccccCHHHHHHHHhhh
Confidence 44 7788889988887 4589999999999999887542 1246666554221110
Q ss_pred --------------------------------------------------------------------------------
Q 026476 154 -------------------------------------------------------------------------------- 153 (238)
Q Consensus 154 -------------------------------------------------------------------------------- 153 (238)
T Consensus 242 ~~~g~lpg~~ma~~F~mLrpndliw~~fV~nyl~ge~pl~fdllyWn~dst~~~~~~~~~~Lrn~y~~N~l~~g~~~v~G 321 (445)
T COG3243 242 VQKGILPGWYMAIVFFLLRPNDLIWNYFVNNYLDGEQPLPFDLLYWNADSTRLPGAAHSEYLRNFYLENRLIRGGLEVSG 321 (445)
T ss_pred hhccCCChHHHHHHHHhcCccccchHHHHHHhcCCCCCCchhHHHhhCCCccCchHHHHHHHHHHHHhChhhccceEECC
Confidence
Q ss_pred -cccccccCCcEEEEecCCCCCCCHHhHHHHHHHHhhcCCCCceEEEcCCCCee
Q 026476 154 -VDDIKGVEVPLSILGAEIDRLSPPALVKEFEEALNAKSGVDSFVKIFPKVAHG 206 (238)
Q Consensus 154 -~~~~~~~~~P~L~i~g~~D~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~H~ 206 (238)
.-++.+++||++++.+++|.+.|.+.+......+ .| ++++...+ +||-
T Consensus 322 ~~VdL~~It~pvy~~a~~~DhI~P~~Sv~~g~~l~---~g-~~~f~l~~-sGHI 370 (445)
T COG3243 322 TMVDLGDITCPVYNLAAEEDHIAPWSSVYLGARLL---GG-EVTFVLSR-SGHI 370 (445)
T ss_pred EEechhhcccceEEEeecccccCCHHHHHHHHHhc---CC-ceEEEEec-CceE
Confidence 0117789999999999999999999988888776 33 67777776 6883
No 118
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=99.17 E-value=3.9e-09 Score=83.12 Aligned_cols=138 Identities=14% Similarity=0.147 Sum_probs=98.3
Q ss_pred eeEEEEeccCCCCCchHHHHHHHHHHCCCEEEeccCCCCCccCCCCCcchHhhHhhcCCCcchhcHHHHHHHHHhcCCce
Q 026476 40 LAVLLISDVYGYEAPNLRKLADKVAAAGFYVAVPDFFHGDPYVADGGKPLQEWIKDHGVDKGFEEAKPVIQALKSKGITA 119 (238)
Q Consensus 40 ~~vl~~hg~~g~~~~~~~~~a~~l~~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~ 119 (238)
.+||=+||..|++ .+++.+...|.+.|++++.+++ +|.+.+++.... .++..+...-+.++++.+.= .++
T Consensus 36 gTVv~~hGsPGSH-~DFkYi~~~l~~~~iR~I~iN~-PGf~~t~~~~~~------~~~n~er~~~~~~ll~~l~i--~~~ 105 (297)
T PF06342_consen 36 GTVVAFHGSPGSH-NDFKYIRPPLDEAGIRFIGINY-PGFGFTPGYPDQ------QYTNEERQNFVNALLDELGI--KGK 105 (297)
T ss_pred eeEEEecCCCCCc-cchhhhhhHHHHcCeEEEEeCC-CCCCCCCCCccc------ccChHHHHHHHHHHHHHcCC--CCc
Confidence 4688899999997 6789999999999999999999 898776653110 11222222333444443311 368
Q ss_pred EEEEEeeccHHHHHHccCCcCceEEEEeccCCcCc---------------------------------------------
Q 026476 120 IGAAGFCWGAKVVVQLGKREFIQAAVLLHPSFVTV--------------------------------------------- 154 (238)
Q Consensus 120 i~l~G~S~GG~~a~~~a~~~~i~a~i~~~~~~~~~--------------------------------------------- 154 (238)
+.++|||.|+-.|+.++......+.+++.|....+
T Consensus 106 ~i~~gHSrGcenal~la~~~~~~g~~lin~~G~r~HkgIrp~~r~~~i~~l~~~lp~~~~~~i~~~~y~~iG~KV~~Gee 185 (297)
T PF06342_consen 106 LIFLGHSRGCENALQLAVTHPLHGLVLINPPGLRPHKGIRPLSRMETINYLYDLLPRFIINAIMYFYYRMIGFKVSDGEE 185 (297)
T ss_pred eEEEEeccchHHHHHHHhcCccceEEEecCCccccccCcCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhCeeecChHH
Confidence 99999999999999988444566777777654321
Q ss_pred --------------------ccccccCCcEEEEecCCCCCCCHHhHHHHHHHH
Q 026476 155 --------------------DDIKGVEVPLSILGAEIDRLSPPALVKEFEEAL 187 (238)
Q Consensus 155 --------------------~~~~~~~~P~L~i~g~~D~~~p~~~~~~~~~~~ 187 (238)
+.+.+.++|+|+.+|.+|.++-.+...++.+.+
T Consensus 186 A~na~r~m~~~df~~q~~~I~~ln~~~ikvli~ygg~DhLIEeeI~~E~a~~f 238 (297)
T PF06342_consen 186 AINAMRSMQNCDFEEQKEYIDKLNKKPIKVLIAYGGKDHLIEEEISFEFAMKF 238 (297)
T ss_pred HHHHHHHHHhcCHHHHHHHHHHhccCCCcEEEEEcCcchhhHHHHHHHHHHHh
Confidence 114455689999999999999877777776655
No 119
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=99.16 E-value=5.8e-11 Score=88.62 Aligned_cols=155 Identities=15% Similarity=0.181 Sum_probs=109.2
Q ss_pred ecCCCCCeeEEEEeccC---CCCCchHHHHHHHHHHCCCEEEeccCCCCCccCCCCCcchHhhHhhcCCCcchhcHHHHH
Q 026476 33 TGSPDSKLAVLLISDVY---GYEAPNLRKLADKVAAAGFYVAVPDFFHGDPYVADGGKPLQEWIKDHGVDKGFEEAKPVI 109 (238)
Q Consensus 33 ~~p~~~~~~vl~~hg~~---g~~~~~~~~~a~~l~~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 109 (238)
+.|+...|..|++||++ |.. ......+.-..++||+|.+++| +. .+. ....++.+.++...+
T Consensus 61 wg~~~~~klfIfIHGGYW~~g~r-k~clsiv~~a~~~gY~vasvgY--~l--~~q----------~htL~qt~~~~~~gv 125 (270)
T KOG4627|consen 61 WGSTNQAKLFIFIHGGYWQEGDR-KMCLSIVGPAVRRGYRVASVGY--NL--CPQ----------VHTLEQTMTQFTHGV 125 (270)
T ss_pred ecCCCCccEEEEEecchhhcCch-hcccchhhhhhhcCeEEEEecc--Cc--Ccc----------cccHHHHHHHHHHHH
Confidence 34566678999999976 333 3344666767788999999997 11 111 112344556677777
Q ss_pred HHHHhc--CCceEEEEEeeccHHHHHHcc---CCcCceEEEEeccCCc-------------------------Ccccccc
Q 026476 110 QALKSK--GITAIGAAGFCWGAKVVVQLG---KREFIQAAVLLHPSFV-------------------------TVDDIKG 159 (238)
Q Consensus 110 ~~l~~~--~~~~i~l~G~S~GG~~a~~~a---~~~~i~a~i~~~~~~~-------------------------~~~~~~~ 159 (238)
+|+-+. ..+++.+-|||.|+.++..+. +.|+|.+.+++.|... +...+..
T Consensus 126 ~filk~~~n~k~l~~gGHSaGAHLa~qav~R~r~prI~gl~l~~GvY~l~EL~~te~g~dlgLt~~~ae~~Scdl~~~~~ 205 (270)
T KOG4627|consen 126 NFILKYTENTKVLTFGGHSAGAHLAAQAVMRQRSPRIWGLILLCGVYDLRELSNTESGNDLGLTERNAESVSCDLWEYTD 205 (270)
T ss_pred HHHHHhcccceeEEEcccchHHHHHHHHHHHhcCchHHHHHHHhhHhhHHHHhCCccccccCcccchhhhcCccHHHhcC
Confidence 777655 467899999999999999854 4678888887766432 0122566
Q ss_pred cCCcEEEEecCCCCCCCHHhHHHHHHHHhhcCCCCceEEEcCCCCeee
Q 026476 160 VEVPLSILGAEIDRLSPPALVKEFEEALNAKSGVDSFVKIFPKVAHGW 207 (238)
Q Consensus 160 ~~~P~L~i~g~~D~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~H~~ 207 (238)
++.|+|++.++.|..--.++.+.+.+.++ +..+..|++.+|.-
T Consensus 206 v~~~ilVv~~~~espklieQnrdf~~q~~-----~a~~~~f~n~~hy~ 248 (270)
T KOG4627|consen 206 VTVWILVVAAEHESPKLIEQNRDFADQLR-----KASFTLFKNYDHYD 248 (270)
T ss_pred ceeeeeEeeecccCcHHHHhhhhHHHHhh-----hcceeecCCcchhh
Confidence 78899999999998655688888888773 24477899888865
No 120
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=99.11 E-value=3.7e-09 Score=80.08 Aligned_cols=179 Identities=16% Similarity=0.172 Sum_probs=110.6
Q ss_pred CCeeEEEEeccCCCCC---chHHHHHHHHHHCCCEEEeccCCC-----CCccCCCC---------CcchHhhHhhcC-CC
Q 026476 38 SKLAVLLISDVYGYEA---PNLRKLADKVAAAGFYVAVPDFFH-----GDPYVADG---------GKPLQEWIKDHG-VD 99 (238)
Q Consensus 38 ~~~~vl~~hg~~g~~~---~~~~~~a~~l~~~G~~v~~~d~~~-----g~~~~~~~---------~~~~~~~~~~~~-~~ 99 (238)
+.+-||++||+..+.. .....+...|.+. +-.+.+|.++ ......+. ..+...|..... ..
T Consensus 4 ~k~rvLcLHGfrQsg~~F~~Ktg~~rK~l~k~-~el~f~~aPh~~~~~~~~~~~~~~~~~a~~~~~~~~~~Wf~~n~~~~ 82 (230)
T KOG2551|consen 4 KKLRVLCLHGFRQSGKVFSEKTGSLRKLLKKL-AELVFPDAPHELPKADLPDSEREKKFDAPPDVEQNRYGWFSNNEASF 82 (230)
T ss_pred CCceEEEecchhhccHHHHHHhhhHHHHHHhh-heEEecCCCccCCcccCCcccccccccCCcccccchhhhhccccccc
Confidence 3567999999775421 1223455555555 6666666521 11111110 111345655443 21
Q ss_pred cchhc----HHHHHHHHHhcCCceEEEEEeeccHHHHHHccC----------CcCceEEEEeccCCcCc------ccccc
Q 026476 100 KGFEE----AKPVIQALKSKGITAIGAAGFCWGAKVVVQLGK----------REFIQAAVLLHPSFVTV------DDIKG 159 (238)
Q Consensus 100 ~~~~d----~~~~~~~l~~~~~~~i~l~G~S~GG~~a~~~a~----------~~~i~a~i~~~~~~~~~------~~~~~ 159 (238)
....- +.-+.+++++.++ ==+|+|||+|+.++..++. .|.++-+|.++|-.... .....
T Consensus 83 ~~~~~~eesl~yl~~~i~enGP-FDGllGFSQGA~laa~l~~~~~~~~~~~~~P~~kF~v~~SGf~~~~~~~~~~~~~~~ 161 (230)
T KOG2551|consen 83 TEYFGFEESLEYLEDYIKENGP-FDGLLGFSQGAALAALLAGLGQKGLPYVKQPPFKFAVFISGFKFPSKKLDESAYKRP 161 (230)
T ss_pred ccccChHHHHHHHHHHHHHhCC-CccccccchhHHHHHHhhcccccCCcccCCCCeEEEEEEecCCCCcchhhhhhhccC
Confidence 12222 3334455555532 2369999999999998764 24678899888765542 22457
Q ss_pred cCCcEEEEecCCCCCCCHHhHHHHHHHHhhcCCCCceEEEcCCCCeeeeecCCCCCHHHHHHHHHHHHHHHHHHHHh
Q 026476 160 VEVPLSILGAEIDRLSPPALVKEFEEALNAKSGVDSFVKIFPKVAHGWTVRYNVEDETAVKAAEEAHHNLLEWFAKY 236 (238)
Q Consensus 160 ~~~P~L~i~g~~D~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~ 236 (238)
+++|.|-|.|+.|.++|.+.+..+++.+. + .++..-+ ++|-+-+. ....+.+.+||++.
T Consensus 162 i~~PSLHi~G~~D~iv~~~~s~~L~~~~~-~----a~vl~Hp-ggH~VP~~------------~~~~~~i~~fi~~~ 220 (230)
T KOG2551|consen 162 LSTPSLHIFGETDTIVPSERSEQLAESFK-D----ATVLEHP-GGHIVPNK------------AKYKEKIADFIQSF 220 (230)
T ss_pred CCCCeeEEecccceeecchHHHHHHHhcC-C----CeEEecC-CCccCCCc------------hHHHHHHHHHHHHH
Confidence 89999999999999999999999999882 2 2455667 49988543 24556677777653
No 121
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=99.10 E-value=1.5e-08 Score=86.11 Aligned_cols=183 Identities=10% Similarity=0.045 Sum_probs=109.9
Q ss_pred eeEEEecCCC----CCeeEEEEeccCCCCCchHHHHHHHHHHCC----CEEEeccCCCCCccCCCCCcchHhhHhhcCCC
Q 026476 28 LNAYVTGSPD----SKLAVLLISDVYGYEAPNLRKLADKVAAAG----FYVAVPDFFHGDPYVADGGKPLQEWIKDHGVD 99 (238)
Q Consensus 28 ~~~~~~~p~~----~~~~vl~~hg~~g~~~~~~~~~a~~l~~~G----~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~ 99 (238)
...+++.|.+ +.|.|+++||..-..........+.|.+.| .+++.+|...+..+... -.....+. .
T Consensus 194 r~v~VY~P~~y~~~~~PvlyllDG~~w~~~~~~~~~ld~li~~g~i~P~ivV~id~~~~~~R~~e-l~~~~~f~-----~ 267 (411)
T PRK10439 194 RRVWIYTTGDAAPEERPLAILLDGQFWAESMPVWPALDSLTHRGQLPPAVYLLIDAIDTTHRSQE-LPCNADFW-----L 267 (411)
T ss_pred eEEEEEECCCCCCCCCCEEEEEECHHhhhcCCHHHHHHHHHHcCCCCceEEEEECCCCccccccc-CCchHHHH-----H
Confidence 6678887753 347777888743222233456677777776 34567775211111100 00000110 0
Q ss_pred cchhcHHHHHHHHHhc-----CCceEEEEEeeccHHHHHHcc-CCc-CceEEEEeccCCcCc-----------cccc---
Q 026476 100 KGFEEAKPVIQALKSK-----GITAIGAAGFCWGAKVVVQLG-KRE-FIQAAVLLHPSFVTV-----------DDIK--- 158 (238)
Q Consensus 100 ~~~~d~~~~~~~l~~~-----~~~~i~l~G~S~GG~~a~~~a-~~~-~i~a~i~~~~~~~~~-----------~~~~--- 158 (238)
-.. .+++-+++++ +.++.+|+|+||||..|+.++ .+| .+.++++++|.+.-+ +.+.
T Consensus 268 ~l~---~eLlP~I~~~y~~~~d~~~~~IaG~S~GGl~AL~~al~~Pd~Fg~v~s~Sgs~ww~~~~~~~~~~l~~~l~~~~ 344 (411)
T PRK10439 268 AVQ---QELLPQVRAIAPFSDDADRTVVAGQSFGGLAALYAGLHWPERFGCVLSQSGSFWWPHRGGQQEGVLLEQLKAGE 344 (411)
T ss_pred HHH---HHHHHHHHHhCCCCCCccceEEEEEChHHHHHHHHHHhCcccccEEEEeccceecCCccCCchhHHHHHHHhcc
Confidence 112 2333444433 567899999999999999987 555 688888888764211 0011
Q ss_pred --ccCCcEEEEecCCCCCCCHHhHHHHHHHHhhcCCCCceEEEcCCCCeeeeecCCCCCHHHHHHHHHHHHHHHHHHH
Q 026476 159 --GVEVPLSILGAEIDRLSPPALVKEFEEALNAKSGVDSFVKIFPKVAHGWTVRYNVEDETAVKAAEEAHHNLLEWFA 234 (238)
Q Consensus 159 --~~~~P~L~i~g~~D~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~ 234 (238)
.....+++-+|+.|..+ .+..+++.+.| .+.|.++++.+++| +|.+. .....+.+.+.||-
T Consensus 345 ~~~~~lr~~i~~G~~E~~~-~~~~~~l~~~L-~~~G~~~~~~~~~G-GHd~~------------~Wr~~L~~~L~~l~ 407 (411)
T PRK10439 345 VSARGLRIVLEAGRREPMI-MRANQALYAQL-HPAGHSVFWRQVDG-GHDAL------------CWRGGLIQGLIDLW 407 (411)
T ss_pred cCCCCceEEEeCCCCCchH-HHHHHHHHHHH-HHCCCcEEEEECCC-CcCHH------------HHHHHHHHHHHHHh
Confidence 11235777789888654 56778899999 56788999999997 79873 34455555566654
No 122
>COG4099 Predicted peptidase [General function prediction only]
Probab=99.07 E-value=6.3e-10 Score=87.59 Aligned_cols=85 Identities=19% Similarity=0.154 Sum_probs=67.1
Q ss_pred CCceEEEEEeeccHHHHHHcc-CCc-CceEEEEeccCCcCccccccc-CCcEEEEecCCCCCCCHHhHHHHHHHHhhcCC
Q 026476 116 GITAIGAAGFCWGAKVVVQLG-KRE-FIQAAVLLHPSFVTVDDIKGV-EVPLSILGAEIDRLSPPALVKEFEEALNAKSG 192 (238)
Q Consensus 116 ~~~~i~l~G~S~GG~~a~~~a-~~~-~i~a~i~~~~~~~~~~~~~~~-~~P~L~i~g~~D~~~p~~~~~~~~~~~~~~~~ 192 (238)
|.+||.++|.|+||..++.++ ..| .+.+++.+.|.+........+ +.|+-++|+.+|+++|.+.+.-+++.++ .-+
T Consensus 267 D~sRIYviGlSrG~~gt~al~~kfPdfFAaa~~iaG~~d~v~lv~~lk~~piWvfhs~dDkv~Pv~nSrv~y~~lk-~~~ 345 (387)
T COG4099 267 DRSRIYVIGLSRGGFGTWALAEKFPDFFAAAVPIAGGGDRVYLVRTLKKAPIWVFHSSDDKVIPVSNSRVLYERLK-ALD 345 (387)
T ss_pred ccceEEEEeecCcchhhHHHHHhCchhhheeeeecCCCchhhhhhhhccCceEEEEecCCCccccCcceeehHHHH-hhc
Confidence 678999999999999999988 555 688888999888765555444 5699999999999999999888888883 333
Q ss_pred CCceEEEcC
Q 026476 193 VDSFVKIFP 201 (238)
Q Consensus 193 ~~~~~~~~~ 201 (238)
.++.+..|.
T Consensus 346 ~kv~Ytaf~ 354 (387)
T COG4099 346 RKVNYTAFL 354 (387)
T ss_pred cccchhhhh
Confidence 355555554
No 123
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=99.03 E-value=1.4e-09 Score=87.76 Aligned_cols=107 Identities=16% Similarity=0.122 Sum_probs=73.2
Q ss_pred CCeeEEEEeccCCCC-CchHHHHHHHHHH-CCCEEEeccCCCCCccCCCCCcchHhhHhhcCCCcchhcHHHHHHHHHhc
Q 026476 38 SKLAVLLISDVYGYE-APNLRKLADKVAA-AGFYVAVPDFFHGDPYVADGGKPLQEWIKDHGVDKGFEEAKPVIQALKSK 115 (238)
Q Consensus 38 ~~~~vl~~hg~~g~~-~~~~~~~a~~l~~-~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~ 115 (238)
..|++|++||+.+.. ..+...+++.+.+ .+|.|+++|+ ++.... . .... ........+++..+++.+.+.
T Consensus 35 ~~p~vilIHG~~~~~~~~~~~~l~~~ll~~~~~nVi~vD~-~~~~~~-~----y~~a--~~~~~~v~~~la~~l~~L~~~ 106 (275)
T cd00707 35 SRPTRFIIHGWTSSGEESWISDLRKAYLSRGDYNVIVVDW-GRGANP-N----YPQA--VNNTRVVGAELAKFLDFLVDN 106 (275)
T ss_pred CCCcEEEEcCCCCCCCCcHHHHHHHHHHhcCCCEEEEEEC-cccccc-C----hHHH--HHhHHHHHHHHHHHHHHHHHh
Confidence 458899999988754 3455667776655 5899999998 655211 1 0000 111122345677778777654
Q ss_pred ---CCceEEEEEeeccHHHHHHccCC--cCceEEEEeccCCc
Q 026476 116 ---GITAIGAAGFCWGAKVVVQLGKR--EFIQAAVLLHPSFV 152 (238)
Q Consensus 116 ---~~~~i~l~G~S~GG~~a~~~a~~--~~i~a~i~~~~~~~ 152 (238)
+.++|.++|||+||.++..++.. ++++.++.+.|...
T Consensus 107 ~g~~~~~i~lIGhSlGa~vAg~~a~~~~~~v~~iv~LDPa~p 148 (275)
T cd00707 107 TGLSLENVHLIGHSLGAHVAGFAGKRLNGKLGRITGLDPAGP 148 (275)
T ss_pred cCCChHHEEEEEecHHHHHHHHHHHHhcCccceeEEecCCcc
Confidence 45799999999999999998842 37999999876543
No 124
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=99.01 E-value=9.7e-09 Score=82.47 Aligned_cols=164 Identities=15% Similarity=0.143 Sum_probs=110.0
Q ss_pred CeeEEEEeccCCCCCchHHHHHHHHHHC---CCEEEeccCCCCCccCCCCCcchHhhHhhcCCCcchhcHHHHHHHHHhc
Q 026476 39 KLAVLLISDVYGYEAPNLRKLADKVAAA---GFYVAVPDFFHGDPYVADGGKPLQEWIKDHGVDKGFEEAKPVIQALKSK 115 (238)
Q Consensus 39 ~~~vl~~hg~~g~~~~~~~~~a~~l~~~---G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~ 115 (238)
+..++++.|-.|. ...|..+...|.++ .+.|++..+ .|+.......... .-.+.++.+.+++-..++++.+...
T Consensus 2 ~~li~~IPGNPGl-v~fY~~Fl~~L~~~l~~~~~i~~ish-~Gh~~~~~~~~~~-~~~~~~sL~~QI~hk~~~i~~~~~~ 78 (266)
T PF10230_consen 2 RPLIVFIPGNPGL-VEFYEEFLSALYEKLNPQFEILGISH-AGHSTSPSNSKFS-PNGRLFSLQDQIEHKIDFIKELIPQ 78 (266)
T ss_pred cEEEEEECCCCCh-HHHHHHHHHHHHHhCCCCCeeEEecC-CCCcCCccccccc-CCCCccCHHHHHHHHHHHHHHHhhh
Confidence 3568889999998 47889999999865 799999999 8886554320000 0011223334444444444444332
Q ss_pred ---CCceEEEEEeeccHHHHHHcc-CCc----CceEEEEeccCCcC----------------------------------
Q 026476 116 ---GITAIGAAGFCWGAKVVVQLG-KRE----FIQAAVLLHPSFVT---------------------------------- 153 (238)
Q Consensus 116 ---~~~~i~l~G~S~GG~~a~~~a-~~~----~i~a~i~~~~~~~~---------------------------------- 153 (238)
...++.++|||.|+++++.+. +.+ .|+.++.+.|....
T Consensus 79 ~~~~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi~~ia~Sp~G~~l~~~~~~~~~~~~~~~~~~~l~~~l 158 (266)
T PF10230_consen 79 KNKPNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTIEDIAKSPNGRRLTPLLFSPPPLVWLASFLSFLLSLL 158 (266)
T ss_pred hcCCCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCccccccCCchhHHHHHHHhhccHHHHHHHHHHHHHHHC
Confidence 456899999999999999987 333 78888887654211
Q ss_pred --------------------------------------------------c-cc-cccc---CCcEEEEecCCCCCCCHH
Q 026476 154 --------------------------------------------------V-DD-IKGV---EVPLSILGAEIDRLSPPA 178 (238)
Q Consensus 154 --------------------------------------------------~-~~-~~~~---~~P~L~i~g~~D~~~p~~ 178 (238)
. +. +... ...+.+.+|.+|..+|.+
T Consensus 159 P~~~~~~lv~~~~~~~~~~~~~t~~~l~~~~~v~qaL~Ma~~Em~~I~~~d~~~~~~~~~~~~~kl~f~fg~~D~Wvp~~ 238 (266)
T PF10230_consen 159 PESVLRWLVRWVMGFPPPAVEATTKFLLSPRVVRQALYMARDEMREIREDDNDELIKHHNENGDKLWFYFGQNDHWVPNE 238 (266)
T ss_pred CHHHHHHHHHHHcCCChHHHHHHHHHhcCHHHHHHHHHHHHHHHHHccCcchHHHHHHhccCCCEEEEEEeCCCCCCCHH
Confidence 0 00 1111 568999999999999999
Q ss_pred hHHHHHHHHhhcCCCCceEEEcCCCCeee
Q 026476 179 LVKEFEEALNAKSGVDSFVKIFPKVAHGW 207 (238)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~g~~H~~ 207 (238)
..+++.+.+. ....++.+.. +|..|+|
T Consensus 239 ~~~~l~~~~~-~~~~~~~v~~-~~i~HaF 265 (266)
T PF10230_consen 239 TRDELIERYP-GHEPDVVVDE-EGIPHAF 265 (266)
T ss_pred HHHHHHHHcC-CCCCeEEEec-CCCCCCC
Confidence 9999999883 2223455555 7788887
No 125
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=98.99 E-value=2.2e-08 Score=81.52 Aligned_cols=162 Identities=15% Similarity=0.138 Sum_probs=100.7
Q ss_pred CeeEEEEeccCCCCC-chHHHHHHHHHHCCCEEEeccCC-CCCccCCCC-C---cchHhhHhhcCCCcchhcHHHHHHHH
Q 026476 39 KLAVLLISDVYGYEA-PNLRKLADKVAAAGFYVAVPDFF-HGDPYVADG-G---KPLQEWIKDHGVDKGFEEAKPVIQAL 112 (238)
Q Consensus 39 ~~~vl~~hg~~g~~~-~~~~~~a~~l~~~G~~v~~~d~~-~g~~~~~~~-~---~~~~~~~~~~~~~~~~~d~~~~~~~l 112 (238)
+|.+|.+.|-+.... ....-+|.-|.+.|+..+.++.+ +|.-.+... . ....+.+- .-...+.++..+++|+
T Consensus 92 rp~~IhLagTGDh~f~rR~~l~a~pLl~~gi~s~~le~Pyyg~RkP~~Q~~s~l~~VsDl~~--~g~~~i~E~~~Ll~Wl 169 (348)
T PF09752_consen 92 RPVCIHLAGTGDHGFWRRRRLMARPLLKEGIASLILENPYYGQRKPKDQRRSSLRNVSDLFV--MGRATILESRALLHWL 169 (348)
T ss_pred CceEEEecCCCccchhhhhhhhhhHHHHcCcceEEEecccccccChhHhhcccccchhHHHH--HHhHHHHHHHHHHHHH
Confidence 567777776543211 12223489999999999998873 333222111 0 11111110 1135677888999999
Q ss_pred HhcCCceEEEEEeeccHHHHHHccC-CcCceEEEE-eccCCc--------------------C-----------------
Q 026476 113 KSKGITAIGAAGFCWGAKVVVQLGK-REFIQAAVL-LHPSFV--------------------T----------------- 153 (238)
Q Consensus 113 ~~~~~~~i~l~G~S~GG~~a~~~a~-~~~i~a~i~-~~~~~~--------------------~----------------- 153 (238)
++++..++++.|.||||.+|.+.+. .|..-+++. +.+... .
T Consensus 170 ~~~G~~~~g~~G~SmGG~~A~laa~~~p~pv~~vp~ls~~sAs~vFt~Gvls~~i~W~~L~~q~~~~~~~~~~~~~~~~~ 249 (348)
T PF09752_consen 170 EREGYGPLGLTGISMGGHMAALAASNWPRPVALVPCLSWSSASVVFTEGVLSNSINWDALEKQFEDTVYEEEISDIPAQN 249 (348)
T ss_pred HhcCCCceEEEEechhHhhHHhhhhcCCCceeEEEeecccCCCcchhhhhhhcCCCHHHHHHHhcccchhhhhcccccCc
Confidence 9999899999999999999999874 443222322 211100 0
Q ss_pred ---------------------------ccccccc-----CCcEEEEecCCCCCCCHHhHHHHHHHHhhcCCCCceEEEcC
Q 026476 154 ---------------------------VDDIKGV-----EVPLSILGAEIDRLSPPALVKEFEEALNAKSGVDSFVKIFP 201 (238)
Q Consensus 154 ---------------------------~~~~~~~-----~~P~L~i~g~~D~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (238)
..++.+. ...+.++.+++|.++|.+.+..+.+.. + ..|+..++
T Consensus 250 ~~~~~~~~~~~~~~~Ea~~~m~~~md~~T~l~nf~~P~dp~~ii~V~A~~DaYVPr~~v~~Lq~~W---P--GsEvR~l~ 324 (348)
T PF09752_consen 250 KSLPLDSMEERRRDREALRFMRGVMDSFTHLTNFPVPVDPSAIIFVAAKNDAYVPRHGVLSLQEIW---P--GSEVRYLP 324 (348)
T ss_pred ccccchhhccccchHHHHHHHHHHHHhhccccccCCCCCCCcEEEEEecCceEechhhcchHHHhC---C--CCeEEEec
Confidence 0001222 235789999999999999999888876 3 45677888
Q ss_pred CCCeeee
Q 026476 202 KVAHGWT 208 (238)
Q Consensus 202 g~~H~~~ 208 (238)
| ||--.
T Consensus 325 g-GHVsA 330 (348)
T PF09752_consen 325 G-GHVSA 330 (348)
T ss_pred C-CcEEE
Confidence 6 88443
No 126
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=98.99 E-value=1.3e-09 Score=97.91 Aligned_cols=96 Identities=14% Similarity=0.088 Sum_probs=70.4
Q ss_pred CeeEEEEeccCCCCCchHHHHHHHHHHCCCEEEeccCCCCCccCCCC-C--------cchHhhHh-------hcCCCcch
Q 026476 39 KLAVLLISDVYGYEAPNLRKLADKVAAAGFYVAVPDFFHGDPYVADG-G--------KPLQEWIK-------DHGVDKGF 102 (238)
Q Consensus 39 ~~~vl~~hg~~g~~~~~~~~~a~~l~~~G~~v~~~d~~~g~~~~~~~-~--------~~~~~~~~-------~~~~~~~~ 102 (238)
.|+||++||+.+.. ..+..+++.|+++||.|+++|+ +|||.+... . .....++. +...++.+
T Consensus 449 ~P~VVllHG~~g~~-~~~~~lA~~La~~Gy~VIaiDl-pGHG~S~~~~~~~~~~a~~~~~~~y~Nl~~l~~aRDn~rQ~v 526 (792)
T TIGR03502 449 WPVVIYQHGITGAK-ENALAFAGTLAAAGVATIAIDH-PLHGARSFDANASGVNATNANVLAYMNLASLLVARDNLRQSI 526 (792)
T ss_pred CcEEEEeCCCCCCH-HHHHHHHHHHHhCCcEEEEeCC-CCCCccccccccccccccccCccceeccccccccccCHHHHH
Confidence 46899999988875 6788999999999999999999 888765221 0 00011111 22446777
Q ss_pred hcHHHHHHHHH------h-------cCCceEEEEEeeccHHHHHHcc
Q 026476 103 EEAKPVIQALK------S-------KGITAIGAAGFCWGAKVVVQLG 136 (238)
Q Consensus 103 ~d~~~~~~~l~------~-------~~~~~i~l~G~S~GG~~a~~~a 136 (238)
.|+..+...++ . .+..++.++||||||.++..++
T Consensus 527 ~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~ 573 (792)
T TIGR03502 527 LDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFI 573 (792)
T ss_pred HHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHH
Confidence 88888888776 1 1356999999999999999866
No 127
>PRK04940 hypothetical protein; Provisional
Probab=98.91 E-value=2.2e-08 Score=74.56 Aligned_cols=97 Identities=8% Similarity=0.019 Sum_probs=68.9
Q ss_pred ceEEEEEeeccHHHHHHccCCcCceEEEEeccCCcCcc---------------------cccccCC--cEEEEecCCCCC
Q 026476 118 TAIGAAGFCWGAKVVVQLGKREFIQAAVLLHPSFVTVD---------------------DIKGVEV--PLSILGAEIDRL 174 (238)
Q Consensus 118 ~~i~l~G~S~GG~~a~~~a~~~~i~a~i~~~~~~~~~~---------------------~~~~~~~--P~L~i~g~~D~~ 174 (238)
+++.++|.|+||+.|..++..-.+++++ ++|...+.. ++. ++. ..+++..+.|++
T Consensus 60 ~~~~liGSSLGGyyA~~La~~~g~~aVL-iNPAv~P~~~L~~~ig~~~~y~~~~~~h~~eL~-~~~p~r~~vllq~gDEv 137 (180)
T PRK04940 60 ERPLICGVGLGGYWAERIGFLCGIRQVI-FNPNLFPEENMEGKIDRPEEYADIATKCVTNFR-EKNRDRCLVILSRNDEV 137 (180)
T ss_pred CCcEEEEeChHHHHHHHHHHHHCCCEEE-ECCCCChHHHHHHHhCCCcchhhhhHHHHHHhh-hcCcccEEEEEeCCCcc
Confidence 5799999999999999999766776665 455433211 111 233 358999999999
Q ss_pred CCHHhHHHHHHHHhhcCCCCceEEEcCCCCeeeeecCCCCCHHHHHHHHHHHHHHHHHHHH
Q 026476 175 SPPALVKEFEEALNAKSGVDSFVKIFPKVAHGWTVRYNVEDETAVKAAEEAHHNLLEWFAK 235 (238)
Q Consensus 175 ~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~ 235 (238)
.....+.+.++. -+.+.+.+|+.|.|.. .++....+++|++.
T Consensus 138 LDyr~a~~~y~~-------~y~~~v~~GGdH~f~~------------fe~~l~~I~~F~~~ 179 (180)
T PRK04940 138 LDSQRTAEELHP-------YYEIVWDEEQTHKFKN------------ISPHLQRIKAFKTL 179 (180)
T ss_pred cCHHHHHHHhcc-------CceEEEECCCCCCCCC------------HHHHHHHHHHHHhc
Confidence 877655544332 1247789999999954 57889999999863
No 128
>KOG3101 consensus Esterase D [General function prediction only]
Probab=98.91 E-value=1.2e-08 Score=76.74 Aligned_cols=94 Identities=15% Similarity=0.156 Sum_probs=62.0
Q ss_pred CCceEEEEEeeccHHHHHHcc-CCc-CceEEEEeccCCcC-----------------c------------ccccccCCcE
Q 026476 116 GITAIGAAGFCWGAKVVVQLG-KRE-FIQAAVLLHPSFVT-----------------V------------DDIKGVEVPL 164 (238)
Q Consensus 116 ~~~~i~l~G~S~GG~~a~~~a-~~~-~i~a~i~~~~~~~~-----------------~------------~~~~~~~~P~ 164 (238)
+..++++.||||||.-|+..+ +++ +.+.+-++.|...+ . .........+
T Consensus 139 d~~k~~IfGHSMGGhGAl~~~Lkn~~kykSvSAFAPI~NP~~cpWGqKAf~gYLG~~ka~W~~yDat~lik~y~~~~~~i 218 (283)
T KOG3101|consen 139 DPLKVGIFGHSMGGHGALTIYLKNPSKYKSVSAFAPICNPINCPWGQKAFTGYLGDNKAQWEAYDATHLIKNYRGVGDDI 218 (283)
T ss_pred cchhcceeccccCCCceEEEEEcCcccccceeccccccCcccCcchHHHhhcccCCChHHHhhcchHHHHHhcCCCCccE
Confidence 567899999999999999976 544 34444444332111 0 1123344569
Q ss_pred EEEecCCCCCCCHH-hHHHHHHHHhhcCCCCceEEEcCCCCeeeee
Q 026476 165 SILGAEIDRLSPPA-LVKEFEEALNAKSGVDSFVKIFPKVAHGWTV 209 (238)
Q Consensus 165 L~i~g~~D~~~p~~-~~~~~~~~~~~~~~~~~~~~~~~g~~H~~~~ 209 (238)
|+-+|+.|++.+.+ ..+.+.++.......++.++.-+|-.|+...
T Consensus 219 lIdqG~~D~Fl~~qLlPe~l~~a~~~~~~~~v~~r~~~gyDHSYyf 264 (283)
T KOG3101|consen 219 LIDQGAADNFLAEQLLPENLLEACKATWQAPVVFRLQEGYDHSYYF 264 (283)
T ss_pred EEecCccchhhhhhcChHHHHHHhhccccccEEEEeecCCCcceee
Confidence 99999999988733 2445666663334467888888888898765
No 129
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.91 E-value=4.1e-08 Score=84.16 Aligned_cols=92 Identities=15% Similarity=0.202 Sum_probs=76.4
Q ss_pred CCceEEEEEeeccHHHHHHccCCc---CceEEEEeccC--------CcCcccccccCCcEEEEecCCCCCCCHHhHHHHH
Q 026476 116 GITAIGAAGFCWGAKVVVQLGKRE---FIQAAVLLHPS--------FVTVDDIKGVEVPLSILGAEIDRLSPPALVKEFE 184 (238)
Q Consensus 116 ~~~~i~l~G~S~GG~~a~~~a~~~---~i~a~i~~~~~--------~~~~~~~~~~~~P~L~i~g~~D~~~p~~~~~~~~ 184 (238)
...+|.|+|+|||+.++..+...+ .++++|++.-. .+..+.+.+++.|+||+.|.+|..+++...+.+.
T Consensus 248 pha~IiLvGrsmGAlVachVSpsnsdv~V~~vVCigypl~~vdgprgirDE~Lldmk~PVLFV~Gsnd~mcspn~ME~vr 327 (784)
T KOG3253|consen 248 PHAPIILVGRSMGALVACHVSPSNSDVEVDAVVCIGYPLDTVDGPRGIRDEALLDMKQPVLFVIGSNDHMCSPNSMEEVR 327 (784)
T ss_pred CCCceEEEecccCceeeEEeccccCCceEEEEEEecccccCCCcccCCcchhhHhcCCceEEEecCCcccCCHHHHHHHH
Confidence 456899999999988888877433 49999998533 3345678889999999999999999999999999
Q ss_pred HHHhhcCCCCceEEEcCCCCeeeeecC
Q 026476 185 EALNAKSGVDSFVKIFPKVAHGWTVRY 211 (238)
Q Consensus 185 ~~~~~~~~~~~~~~~~~g~~H~~~~~~ 211 (238)
+.++. .++++++++++|.+..+.
T Consensus 328 eKMqA----~~elhVI~~adhsmaipk 350 (784)
T KOG3253|consen 328 EKMQA----EVELHVIGGADHSMAIPK 350 (784)
T ss_pred HHhhc----cceEEEecCCCccccCCc
Confidence 98842 678999999999997654
No 130
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=98.88 E-value=4e-08 Score=77.02 Aligned_cols=169 Identities=18% Similarity=0.204 Sum_probs=103.3
Q ss_pred eeEEEEeccCCCCCchHHHHHHHHHHCCCEEEeccCCCCCccCCCCCcchHhhHhhcCCCcchhcHHHHHHHHHhc-CCc
Q 026476 40 LAVLLISDVYGYEAPNLRKLADKVAAAGFYVAVPDFFHGDPYVADGGKPLQEWIKDHGVDKGFEEAKPVIQALKSK-GIT 118 (238)
Q Consensus 40 ~~vl~~hg~~g~~~~~~~~~a~~l~~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~-~~~ 118 (238)
++|+++|++.|. ...|..+++.|....+.|+.++. +|...... ......+-+...++.+++. +..
T Consensus 1 ~~lf~~p~~gG~-~~~y~~la~~l~~~~~~v~~i~~-~~~~~~~~------------~~~si~~la~~y~~~I~~~~~~g 66 (229)
T PF00975_consen 1 RPLFCFPPAGGS-ASSYRPLARALPDDVIGVYGIEY-PGRGDDEP------------PPDSIEELASRYAEAIRARQPEG 66 (229)
T ss_dssp -EEEEESSTTCS-GGGGHHHHHHHTTTEEEEEEECS-TTSCTTSH------------EESSHHHHHHHHHHHHHHHTSSS
T ss_pred CeEEEEcCCccC-HHHHHHHHHhCCCCeEEEEEEec-CCCCCCCC------------CCCCHHHHHHHHHHHhhhhCCCC
Confidence 368999999887 47889999999886688889888 66541110 0011112233444555554 334
Q ss_pred eEEEEEeeccHHHHHHccCC-----cCceEEEEeccCCcCcc--------------------------------------
Q 026476 119 AIGAAGFCWGAKVVVQLGKR-----EFIQAAVLLHPSFVTVD-------------------------------------- 155 (238)
Q Consensus 119 ~i~l~G~S~GG~~a~~~a~~-----~~i~a~i~~~~~~~~~~-------------------------------------- 155 (238)
++.++|||+||.+|..+|+. ..+..++++.+......
T Consensus 67 p~~L~G~S~Gg~lA~E~A~~Le~~G~~v~~l~liD~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (229)
T PF00975_consen 67 PYVLAGWSFGGILAFEMARQLEEAGEEVSRLILIDSPPPSIKERPRSREPSDEQFIEELRRIGGTPDASLEDEELLARLL 146 (229)
T ss_dssp SEEEEEETHHHHHHHHHHHHHHHTT-SESEEEEESCSSTTCHSCHHHHHCHHHHHHHHHHHHCHHHHHHCHHHHHHHHHH
T ss_pred CeeehccCccHHHHHHHHHHHHHhhhccCceEEecCCCCCcccchhhhhhhHHHHHHHHHHhcCCchhhhcCHHHHHHHH
Confidence 99999999999999998842 35778888874322100
Q ss_pred ------------c-cccc---CCcEEEEecCCCCCCCHHhHHHHHHHHhhcCCCCceEEEcCCCCeeeeecCCCCCHHHH
Q 026476 156 ------------D-IKGV---EVPLSILGAEIDRLSPPALVKEFEEALNAKSGVDSFVKIFPKVAHGWTVRYNVEDETAV 219 (238)
Q Consensus 156 ------------~-~~~~---~~P~L~i~g~~D~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~ 219 (238)
. .... .+|.++.....|+....+.......+- .....+++++..+| +|..... .
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~-~~~~~~~~~~~v~G-~H~~~l~-~------- 216 (229)
T PF00975_consen 147 RALRDDFQALENYSIRPIDKQKVPITLFYALDDPLVSMDRLEEADRWW-DYTSGDVEVHDVPG-DHFSMLK-P------- 216 (229)
T ss_dssp HHHHHHHHHHHTCS-TTSSSESSEEEEEEECSSSSSSHHCGGHHCHHH-GCBSSSEEEEEESS-ETTGHHS-T-------
T ss_pred HHHHHHHHHHhhccCCccccCCCcEEEEecCCCccccchhhhhHHHHH-HhcCCCcEEEEEcC-CCcEecc-h-------
Confidence 0 1111 346788888888876555212211122 33444778889996 8877665 2
Q ss_pred HHHHHHHHHHHHHH
Q 026476 220 KAAEEAHHNLLEWF 233 (238)
Q Consensus 220 ~~~~~~~~~~~~fl 233 (238)
...+..+.+.+||
T Consensus 217 -~~~~i~~~I~~~~ 229 (229)
T PF00975_consen 217 -HVAEIAEKIAEWL 229 (229)
T ss_dssp -THHHHHHHHHHHH
T ss_pred -HHHHHHHHHhccC
Confidence 2345556666554
No 131
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=98.88 E-value=2.6e-08 Score=84.62 Aligned_cols=107 Identities=12% Similarity=0.042 Sum_probs=71.9
Q ss_pred CCeeEEEEeccCCCC--CchHHHHHHHHHHC--CCEEEeccCCCCCccCCCCCcchHhhHhhcCCCcchhcHHHHHHHHH
Q 026476 38 SKLAVLLISDVYGYE--APNLRKLADKVAAA--GFYVAVPDFFHGDPYVADGGKPLQEWIKDHGVDKGFEEAKPVIQALK 113 (238)
Q Consensus 38 ~~~~vl~~hg~~g~~--~~~~~~~a~~l~~~--G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~ 113 (238)
..|++|++||+.+.. ..+...+++.|... .+.|+++|+ +|++.+... ... . ......+++.++++++.
T Consensus 40 ~~ptvIlIHG~~~s~~~~~w~~~l~~al~~~~~d~nVI~VDw-~g~g~s~y~-~a~-~-----~t~~vg~~la~lI~~L~ 111 (442)
T TIGR03230 40 ETKTFIVIHGWTVTGMFESWVPKLVAALYEREPSANVIVVDW-LSRAQQHYP-TSA-A-----YTKLVGKDVAKFVNWMQ 111 (442)
T ss_pred CCCeEEEECCCCcCCcchhhHHHHHHHHHhccCCCEEEEEEC-CCcCCCCCc-ccc-c-----cHHHHHHHHHHHHHHHH
Confidence 458999999987532 23444577666533 699999999 777644211 000 0 01123356677777775
Q ss_pred hc---CCceEEEEEeeccHHHHHHccCC--cCceEEEEeccCCc
Q 026476 114 SK---GITAIGAAGFCWGAKVVVQLGKR--EFIQAAVLLHPSFV 152 (238)
Q Consensus 114 ~~---~~~~i~l~G~S~GG~~a~~~a~~--~~i~a~i~~~~~~~ 152 (238)
+. +.+++.++||||||.+|..++.. .++..++.+.|..+
T Consensus 112 ~~~gl~l~~VhLIGHSLGAhIAg~ag~~~p~rV~rItgLDPAgP 155 (442)
T TIGR03230 112 EEFNYPWDNVHLLGYSLGAHVAGIAGSLTKHKVNRITGLDPAGP 155 (442)
T ss_pred HhhCCCCCcEEEEEECHHHHHHHHHHHhCCcceeEEEEEcCCCC
Confidence 43 46899999999999999998842 37899998887543
No 132
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=98.86 E-value=1.4e-08 Score=80.55 Aligned_cols=183 Identities=13% Similarity=0.114 Sum_probs=112.2
Q ss_pred CCeeEEEEeccCCCCCchHHHHHHHHH-HCCCE--EEeccCC-CCCccCCCC--CcchHhhH-----hh--cCCCcchhc
Q 026476 38 SKLAVLLISDVYGYEAPNLRKLADKVA-AAGFY--VAVPDFF-HGDPYVADG--GKPLQEWI-----KD--HGVDKGFEE 104 (238)
Q Consensus 38 ~~~~vl~~hg~~g~~~~~~~~~a~~l~-~~G~~--v~~~d~~-~g~~~~~~~--~~~~~~~~-----~~--~~~~~~~~d 104 (238)
...++||+||+.|+. ..+..+++.+. +.|.. ++..+-. .|.-.-.+. .......+ .. ....+....
T Consensus 10 ~~tPTifihG~~gt~-~s~~~mi~~~~~~~~~~~~~l~v~V~~~G~v~~~G~~~~~~~nPiIqV~F~~n~~~~~~~qa~w 88 (255)
T PF06028_consen 10 STTPTIFIHGYGGTA-NSFNHMINRLENKQGVAQKVLTVTVSKNGKVKVSGKLSKNAKNPIIQVNFEDNRNANYKKQAKW 88 (255)
T ss_dssp S-EEEEEE--TTGGC-CCCHHHHHHHHHCSTS-S-EEEEEEETTSEEEEES---TT-SS-EEEEEESSTT-CHHHHHHHH
T ss_pred CCCcEEEECCCCCCh-hHHHHHHHHHHhhcCCCceEEEEEECCCCeEEEeeecCCCCCCCEEEEEecCCCcCCHHHHHHH
Confidence 347899999998875 56789999997 66532 3333321 343111110 00000000 01 112345566
Q ss_pred HHHHHHHHHhc-CCceEEEEEeeccHHHHHHccC-------CcCceEEEEeccCCcCccc--------------------
Q 026476 105 AKPVIQALKSK-GITAIGAAGFCWGAKVVVQLGK-------REFIQAAVLLHPSFVTVDD-------------------- 156 (238)
Q Consensus 105 ~~~~~~~l~~~-~~~~i~l~G~S~GG~~a~~~a~-------~~~i~a~i~~~~~~~~~~~-------------------- 156 (238)
+..++.+|+++ ...++-++||||||..+..++. .|.+...|.+.+++.....
T Consensus 89 l~~vl~~L~~~Y~~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfng~~~~~~~~~~~~~~~~gp~~~~~ 168 (255)
T PF06028_consen 89 LKKVLKYLKKKYHFKKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFNGILGMNDDQNQNDLNKNGPKSMTP 168 (255)
T ss_dssp HHHHHHHHHHCC--SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TTTTTCCSC-TTTT-CSTT-BSS--H
T ss_pred HHHHHHHHHHhcCCCEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccCccccccccchhhhhcccCCcccCH
Confidence 78888888877 7899999999999999998652 2478999999876542100
Q ss_pred -------c----cccCCcEEEEecC------CCCCCCHHhHHHHHHHHhhcCCCCceEEEcCC--CCeeeeecCCCCCHH
Q 026476 157 -------I----KGVEVPLSILGAE------IDRLSPPALVKEFEEALNAKSGVDSFVKIFPK--VAHGWTVRYNVEDET 217 (238)
Q Consensus 157 -------~----~~~~~P~L~i~g~------~D~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g--~~H~~~~~~~~~~~~ 217 (238)
. ..-...+|-|.|. .|..||...+..+.-.+ ......++.+++.| +.|+-..+
T Consensus 169 ~y~~l~~~~~~~~p~~i~VLnI~G~~~~g~~sDG~V~~~Ss~sl~~L~-~~~~~~Y~e~~v~G~~a~HS~Lhe------- 240 (255)
T PF06028_consen 169 MYQDLLKNRRKNFPKNIQVLNIYGDLEDGSNSDGIVPNASSLSLRYLL-KNRAKSYQEKTVTGKDAQHSQLHE------- 240 (255)
T ss_dssp HHHHHHHTHGGGSTTT-EEEEEEEESBTTCSBTSSSBHHHHCTHHHHC-TTTSSEEEEEEEESGGGSCCGGGC-------
T ss_pred HHHHHHHHHHhhCCCCeEEEEEecccCCCCCCCeEEeHHHHHHHHHHh-hcccCceEEEEEECCCCccccCCC-------
Confidence 1 1123579999998 79999999999999888 44445778888876 36766542
Q ss_pred HHHHHHHHHHHHHHHH
Q 026476 218 AVKAAEEAHHNLLEWF 233 (238)
Q Consensus 218 ~~~~~~~~~~~~~~fl 233 (238)
..++.+.+.+||
T Consensus 241 ----N~~V~~~I~~FL 252 (255)
T PF06028_consen 241 ----NPQVDKLIIQFL 252 (255)
T ss_dssp ----CHHHHHHHHHHH
T ss_pred ----CHHHHHHHHHHh
Confidence 256778888887
No 133
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.84 E-value=4.9e-07 Score=70.73 Aligned_cols=95 Identities=16% Similarity=0.276 Sum_probs=57.1
Q ss_pred CeeEEEEeccCCCCCchHHHHHHHHHHC--CCEEEeccCCCCCccCCCCCcchHhhHhhcCCCcchhcHHHHHHHHHhcC
Q 026476 39 KLAVLLISDVYGYEAPNLRKLADKVAAA--GFYVAVPDFFHGDPYVADGGKPLQEWIKDHGVDKGFEEAKPVIQALKSKG 116 (238)
Q Consensus 39 ~~~vl~~hg~~g~~~~~~~~~a~~l~~~--G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~ 116 (238)
.|.++++||+.+.. ..+......+... .|.++.+|. +|++.+. . . .........++..+++ ..+
T Consensus 21 ~~~i~~~hg~~~~~-~~~~~~~~~~~~~~~~~~~~~~d~-~g~g~s~-~-~-------~~~~~~~~~~~~~~~~---~~~ 86 (282)
T COG0596 21 GPPLVLLHGFPGSS-SVWRPVFKVLPALAARYRVIAPDL-RGHGRSD-P-A-------GYSLSAYADDLAALLD---ALG 86 (282)
T ss_pred CCeEEEeCCCCCch-hhhHHHHHHhhccccceEEEEecc-cCCCCCC-c-c-------cccHHHHHHHHHHHHH---HhC
Confidence 45899999988764 3333322233332 189999999 7888764 0 0 0000111334444444 445
Q ss_pred CceEEEEEeeccHHHHHHcc-CCc-CceEEEEe
Q 026476 117 ITAIGAAGFCWGAKVVVQLG-KRE-FIQAAVLL 147 (238)
Q Consensus 117 ~~~i~l~G~S~GG~~a~~~a-~~~-~i~a~i~~ 147 (238)
..++.++|||+||.+++.++ ..+ .+++++.+
T Consensus 87 ~~~~~l~G~S~Gg~~~~~~~~~~p~~~~~~v~~ 119 (282)
T COG0596 87 LEKVVLVGHSMGGAVALALALRHPDRVRGLVLI 119 (282)
T ss_pred CCceEEEEecccHHHHHHHHHhcchhhheeeEe
Confidence 56699999999999999877 333 34444443
No 134
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=98.83 E-value=1.4e-08 Score=65.81 Aligned_cols=74 Identities=16% Similarity=0.123 Sum_probs=52.3
Q ss_pred eeEEEecCCCC-CeeEEEEeccCCCCCchHHHHHHHHHHCCCEEEeccCCCCCccCCCCCcchHhhHhhcCCCcchhcHH
Q 026476 28 LNAYVTGSPDS-KLAVLLISDVYGYEAPNLRKLADKVAAAGFYVAVPDFFHGDPYVADGGKPLQEWIKDHGVDKGFEEAK 106 (238)
Q Consensus 28 ~~~~~~~p~~~-~~~vl~~hg~~g~~~~~~~~~a~~l~~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 106 (238)
+....+.|+++ +..|+++||.... ...+..+++.|+++||.|+++|+ +|+|.|.+.... ...++..++|+.
T Consensus 4 L~~~~w~p~~~~k~~v~i~HG~~eh-~~ry~~~a~~L~~~G~~V~~~D~-rGhG~S~g~rg~------~~~~~~~v~D~~ 75 (79)
T PF12146_consen 4 LFYRRWKPENPPKAVVVIVHGFGEH-SGRYAHLAEFLAEQGYAVFAYDH-RGHGRSEGKRGH------IDSFDDYVDDLH 75 (79)
T ss_pred EEEEEecCCCCCCEEEEEeCCcHHH-HHHHHHHHHHHHhCCCEEEEECC-CcCCCCCCcccc------cCCHHHHHHHHH
Confidence 45566677765 5667777776554 47899999999999999999999 999988753111 112244566666
Q ss_pred HHH
Q 026476 107 PVI 109 (238)
Q Consensus 107 ~~~ 109 (238)
.++
T Consensus 76 ~~~ 78 (79)
T PF12146_consen 76 QFI 78 (79)
T ss_pred HHh
Confidence 654
No 135
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.80 E-value=4.7e-07 Score=69.93 Aligned_cols=183 Identities=16% Similarity=0.128 Sum_probs=115.0
Q ss_pred EeeCCeeEEEecCCCCCeeEEEEeccCCCCCchHHHHHHHHHHC-C--CEEEeccCCCCCccCCCCCcchHhhHhhcCCC
Q 026476 23 EKLGGLNAYVTGSPDSKLAVLLISDVYGYEAPNLRKLADKVAAA-G--FYVAVPDFFHGDPYVADGGKPLQEWIKDHGVD 99 (238)
Q Consensus 23 ~~~~~~~~~~~~p~~~~~~vl~~hg~~g~~~~~~~~~a~~l~~~-G--~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~ 99 (238)
+++-.+.-|+..+....+.++.+.|..|.. ..|.++++.|.+. + ..++.+.. -|+...+..-++..... ..+.-
T Consensus 13 ~si~~~~~~v~~~~~~~~li~~IpGNPG~~-gFY~~F~~~L~~~l~~r~~~wtIsh-~~H~~~P~sl~~~~s~~-~~eif 89 (301)
T KOG3975|consen 13 TSILTLKPWVTKSGEDKPLIVWIPGNPGLL-GFYTEFARHLHLNLIDRLPVWTISH-AGHALMPASLREDHSHT-NEEIF 89 (301)
T ss_pred ccceeeeeeeccCCCCceEEEEecCCCCch-hHHHHHHHHHHHhcccccceeEEec-cccccCCcccccccccc-ccccc
Confidence 333344444444433456677888988885 7889999999876 2 44777777 56655442211111111 11111
Q ss_pred cchhcHHHHHHHHHhc--CCceEEEEEeeccHHHHHHccC-C-c--CceEEEEeccCCcC--------------------
Q 026476 100 KGFEEAKPVIQALKSK--GITAIGAAGFCWGAKVVVQLGK-R-E--FIQAAVLLHPSFVT-------------------- 153 (238)
Q Consensus 100 ~~~~d~~~~~~~l~~~--~~~~i~l~G~S~GG~~a~~~a~-~-~--~i~a~i~~~~~~~~-------------------- 153 (238)
...+.+.--++++++. ...||.++|||-|+++.+.+.. . + .+..++++.|....
T Consensus 90 sL~~QV~HKlaFik~~~Pk~~ki~iiGHSiGaYm~Lqil~~~k~~~~vqKa~~LFPTIerM~eSpnG~~~t~~l~~~~hv 169 (301)
T KOG3975|consen 90 SLQDQVDHKLAFIKEYVPKDRKIYIIGHSIGAYMVLQILPSIKLVFSVQKAVLLFPTIERMHESPNGIRLTKVLRYLPHV 169 (301)
T ss_pred chhhHHHHHHHHHHHhCCCCCEEEEEecchhHHHHHHHhhhcccccceEEEEEecchHHHHhcCCCceEeeeeeeeehhh
Confidence 2334566677777776 3569999999999999999763 2 1 45555555432100
Q ss_pred -----------------------------------------------------------------cccccccCCcEEEEe
Q 026476 154 -----------------------------------------------------------------VDDIKGVEVPLSILG 168 (238)
Q Consensus 154 -----------------------------------------------------------------~~~~~~~~~P~L~i~ 168 (238)
.+..+...+-+-+.+
T Consensus 170 ~~lt~yi~~~~lp~~ir~~Li~~~l~~~n~p~e~l~tal~l~h~~v~rn~v~la~qEm~eV~~~d~e~~een~d~l~Fyy 249 (301)
T KOG3975|consen 170 VSLTSYIYWILLPGFIRFILIKFMLCGSNGPQEFLSTALFLTHPQVVRNSVGLAAQEMEEVTTRDIEYCEENLDSLWFYY 249 (301)
T ss_pred hheeeeeeeecChHHHHHHHHHHhcccCCCcHHHHhhHHHhhcHHHHHHHhhhchHHHHHHHHhHHHHHHhcCcEEEEEc
Confidence 000333456788999
Q ss_pred cCCCCCCCHHhHHHHHHHHhhcCCCCceEEEcCCCCeeeeecCC
Q 026476 169 AEIDRLSPPALVKEFEEALNAKSGVDSFVKIFPKVAHGWTVRYN 212 (238)
Q Consensus 169 g~~D~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~H~~~~~~~ 212 (238)
|++|..+|.+..+.+.+.++ ..+.++.+ .+..|.|-.+..
T Consensus 250 gt~DgW~p~~~~d~~kdd~~---eed~~Lde-dki~HAFV~~~~ 289 (301)
T KOG3975|consen 250 GTNDGWVPSHYYDYYKDDVP---EEDLKLDE-DKIPHAFVVKHA 289 (301)
T ss_pred cCCCCCcchHHHHHHhhhcc---hhceeecc-ccCCcceeeccc
Confidence 99999999998888888773 33666666 568899976543
No 136
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=98.78 E-value=1.7e-07 Score=76.53 Aligned_cols=65 Identities=22% Similarity=0.382 Sum_probs=45.2
Q ss_pred ccccCCcEEEEecCCCCCCCHHhHHHHHHHHhhcCCCCceEEEcC-CCCeeeeecCCCCCHHHHHHHHHHHHHHHHHHHH
Q 026476 157 IKGVEVPLSILGAEIDRLSPPALVKEFEEALNAKSGVDSFVKIFP-KVAHGWTVRYNVEDETAVKAAEEAHHNLLEWFAK 235 (238)
Q Consensus 157 ~~~~~~P~L~i~g~~D~~~p~~~~~~~~~~~~~~~~~~~~~~~~~-g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~ 235 (238)
+++++.|+|++.-+.|.++|+++.+.+.+.+ ...+. +++++ ..||.-+.- ..+..-..+.+||+.
T Consensus 302 l~~i~~~~lv~gi~sD~lfp~~~~~~~~~~L-~~~~~---~~~i~S~~GHDaFL~----------e~~~~~~~i~~fL~~ 367 (368)
T COG2021 302 LARIKAPVLVVGITSDWLFPPELQRALAEAL-PAAGA---LREIDSPYGHDAFLV----------ESEAVGPLIRKFLAL 367 (368)
T ss_pred HhcCccCEEEEEecccccCCHHHHHHHHHhc-cccCc---eEEecCCCCchhhhc----------chhhhhHHHHHHhhc
Confidence 6778999999999999999999999999999 44443 44443 346633221 123444677788764
No 137
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=98.73 E-value=7.7e-07 Score=70.50 Aligned_cols=168 Identities=15% Similarity=0.135 Sum_probs=114.4
Q ss_pred eEEEEeccCCCCCchHHHHHHHHHHCCCEEEeccCCCCCccCCCCCcchHhhHhhcCC-CcchhcHHHHHHHHHhcC---
Q 026476 41 AVLLISDVYGYEAPNLRKLADKVAAAGFYVAVPDFFHGDPYVADGGKPLQEWIKDHGV-DKGFEEAKPVIQALKSKG--- 116 (238)
Q Consensus 41 ~vl~~hg~~g~~~~~~~~~a~~l~~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~d~~~~~~~l~~~~--- 116 (238)
++|++-||.|.....+...++...+.|+.++++-.. -... ..+ .....-+..+++.+.+..
T Consensus 1 plvvl~gW~gA~~~hl~KY~~~Y~~~g~~il~~~~~-~~~~--------------~~~~~~~~~~~~~l~~~l~~~~~~~ 65 (240)
T PF05705_consen 1 PLVVLLGWMGAKPKHLAKYSDLYQDPGFDILLVTSP-PADF--------------FWPSKRLAPAADKLLELLSDSQSAS 65 (240)
T ss_pred CEEEEEeCCCCCHHHHHHHHHHHHhcCCeEEEEeCC-HHHH--------------eeeccchHHHHHHHHHHhhhhccCC
Confidence 478888999977667777888888899999987761 1110 000 112233344555554432
Q ss_pred CceEEEEEeeccHHHHHHc-cC-----C------cCceEEEEeccCCc--------------Ccc---------------
Q 026476 117 ITAIGAAGFCWGAKVVVQL-GK-----R------EFIQAAVLLHPSFV--------------TVD--------------- 155 (238)
Q Consensus 117 ~~~i~l~G~S~GG~~a~~~-a~-----~------~~i~a~i~~~~~~~--------------~~~--------------- 155 (238)
..+|.+-.||.||...+.. .. . +.+++.|.=+.+.. +..
T Consensus 66 ~~~il~H~FSnGG~~~~~~l~~~~~~~~~~~~~~~~i~g~I~DS~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (240)
T PF05705_consen 66 PPPILFHSFSNGGSFLYSQLLEAYQSRKKFGKLLPRIKGIIFDSCPGIPTYSSSARAFSAALPKSSPRWFVPLWPLLQFL 145 (240)
T ss_pred CCCEEEEEEECchHHHHHHHHHHHHhcccccccccccceeEEeCCCCccccccHHHHHHHHcCccchhhHHHHHHHHHHH
Confidence 2389999999998888763 21 1 23666664332210 000
Q ss_pred ---------------------------cccccCCcEEEEecCCCCCCCHHhHHHHHHHHhhcCCCCceEEEcCCCCeeee
Q 026476 156 ---------------------------DIKGVEVPLSILGAEIDRLSPPALVKEFEEALNAKSGVDSFVKIFPKVAHGWT 208 (238)
Q Consensus 156 ---------------------------~~~~~~~P~L~i~g~~D~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~H~~~ 208 (238)
......+|-|++++++|.+++.+.++++.+.. ++.|.+++.+.|+++.|.-+
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~lylYS~~D~l~~~~~ve~~~~~~-~~~G~~V~~~~f~~S~HV~H 224 (240)
T PF05705_consen 146 LRLSIISYFIFGYPDVQEYYRRALNDFANSPSRCPRLYLYSKADPLIPWRDVEEHAEEA-RRKGWDVRAEKFEDSPHVAH 224 (240)
T ss_pred HHHHHHHHHHhcCCcHHHHHHHHHhhhhcCCCCCCeEEecCCCCcCcCHHHHHHHHHHH-HHcCCeEEEecCCCCchhhh
Confidence 02334679999999999999999999999998 55788899999999999887
Q ss_pred ecCCCCCHHHHHHHHHHHHHHHHHH
Q 026476 209 VRYNVEDETAVKAAEEAHHNLLEWF 233 (238)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~fl 233 (238)
.+..+ ++.|+.+.+|+
T Consensus 225 ~r~~p---------~~Y~~~v~~fw 240 (240)
T PF05705_consen 225 LRKHP---------DRYWRAVDEFW 240 (240)
T ss_pred cccCH---------HHHHHHHHhhC
Confidence 66544 68888888874
No 138
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=98.72 E-value=2.3e-06 Score=70.23 Aligned_cols=184 Identities=13% Similarity=0.109 Sum_probs=112.3
Q ss_pred eeEEEEeccCCC--CCchHHHHHHHHHHCCCEEEeccCCCCCcc--CCCC----------Cc---chH-----------h
Q 026476 40 LAVLLISDVYGY--EAPNLRKLADKVAAAGFYVAVPDFFHGDPY--VADG----------GK---PLQ-----------E 91 (238)
Q Consensus 40 ~~vl~~hg~~g~--~~~~~~~~a~~l~~~G~~v~~~d~~~g~~~--~~~~----------~~---~~~-----------~ 91 (238)
-+||++|+.... ....+..+.+.|...||.++++... -... .+.. .. ... .
T Consensus 88 G~vIilp~~g~~~d~p~~i~~LR~~L~~~GW~Tlsit~P-~~~~~~~p~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~ 166 (310)
T PF12048_consen 88 GAVIILPDWGEHPDWPGLIAPLRRELPDHGWATLSITLP-DPAPPASPNRATEAEEVPSAGDQQLSQPSDEPSPASAQEA 166 (310)
T ss_pred eEEEEecCCCCCCCcHhHHHHHHHHhhhcCceEEEecCC-CcccccCCccCCCCCCCCCCCCCCcCCCCCCCccccccHh
Confidence 578899987643 1245678999999999999987762 2100 0000 00 000 0
Q ss_pred hHhhcCCCcchhcHHHHHHHHHhcCCceEEEEEeeccHHHHHHccC-Cc--CceEEEEeccCCcCc-------ccccccC
Q 026476 92 WIKDHGVDKGFEEAKPVIQALKSKGITAIGAAGFCWGAKVVVQLGK-RE--FIQAAVLLHPSFVTV-------DDIKGVE 161 (238)
Q Consensus 92 ~~~~~~~~~~~~d~~~~~~~l~~~~~~~i~l~G~S~GG~~a~~~a~-~~--~i~a~i~~~~~~~~~-------~~~~~~~ 161 (238)
-............+.++++++++++..+|.|+||+.|+.+++.+.. .+ .+++.|.+.+..... +.+...+
T Consensus 167 ~~~~~~~~~~~ari~Aa~~~~~~~~~~~ivlIg~G~gA~~~~~~la~~~~~~~daLV~I~a~~p~~~~n~~l~~~la~l~ 246 (310)
T PF12048_consen 167 EAREAYEERLFARIEAAIAFAQQQGGKNIVLIGHGTGAGWAARYLAEKPPPMPDALVLINAYWPQPDRNPALAEQLAQLK 246 (310)
T ss_pred HHhHHHHHHHHHHHHHHHHHHHhcCCceEEEEEeChhHHHHHHHHhcCCCcccCeEEEEeCCCCcchhhhhHHHHhhccC
Confidence 0000011345566888888888888778999999999999999663 33 588999888765543 2356788
Q ss_pred CcEEEEecCCCCCCCHHhHHHHHHHHhhcCCCCceEEEcCCCCeeeeecCCCCCHHHHHHHHHHHHHHHHHHHHh
Q 026476 162 VPLSILGAEIDRLSPPALVKEFEEALNAKSGVDSFVKIFPKVAHGWTVRYNVEDETAVKAAEEAHHNLLEWFAKY 236 (238)
Q Consensus 162 ~P~L~i~g~~D~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~ 236 (238)
.|+|=|++.+.+. .......=....+++.+..+.-..+.+..|.... ..+.+.++|..||+++
T Consensus 247 iPvLDi~~~~~~~-~~~~a~~R~~~a~r~~~~~YrQ~~L~~~~~~~~~-----------~~~~l~~rIrGWL~~~ 309 (310)
T PF12048_consen 247 IPVLDIYSADNPA-SQQTAKQRKQAAKRNKKPDYRQIQLPGLPDNPSG-----------WQEQLLRRIRGWLKRH 309 (310)
T ss_pred CCEEEEecCCChH-HHHHHHHHHHHHHhccCCCceeEecCCCCCChhh-----------HHHHHHHHHHHHHHhh
Confidence 9999999866221 1222221122222233345555556655554321 2344899999999876
No 139
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=98.68 E-value=2.5e-06 Score=62.72 Aligned_cols=106 Identities=12% Similarity=0.071 Sum_probs=73.4
Q ss_pred CceEEEEEeeccHHHHHHccC--CcCceEEEEeccCCcCcc-------------cccccCCcEEEEecCCCCCCCHHhHH
Q 026476 117 ITAIGAAGFCWGAKVVVQLGK--REFIQAAVLLHPSFVTVD-------------DIKGVEVPLSILGAEIDRLSPPALVK 181 (238)
Q Consensus 117 ~~~i~l~G~S~GG~~a~~~a~--~~~i~a~i~~~~~~~~~~-------------~~~~~~~P~L~i~g~~D~~~p~~~~~ 181 (238)
.+++.+++||+|..++..++. ..+|++++++.|.....+ ...+..-|.+++.+.+|++++.+..+
T Consensus 58 ~~~~vlVAHSLGc~~v~h~~~~~~~~V~GalLVAppd~~~~~~~~~~~~tf~~~p~~~lpfps~vvaSrnDp~~~~~~a~ 137 (181)
T COG3545 58 EGPVVLVAHSLGCATVAHWAEHIQRQVAGALLVAPPDVSRPEIRPKHLMTFDPIPREPLPFPSVVVASRNDPYVSYEHAE 137 (181)
T ss_pred CCCeEEEEecccHHHHHHHHHhhhhccceEEEecCCCccccccchhhccccCCCccccCCCceeEEEecCCCCCCHHHHH
Confidence 456999999999999999873 448999998887654321 11223348999999999999999999
Q ss_pred HHHHHHhhcCCCCceEEEcCCCCeeeeecCCCCCHHHHHHHHHHHHHHHHHHHH
Q 026476 182 EFEEALNAKSGVDSFVKIFPKVAHGWTVRYNVEDETAVKAAEEAHHNLLEWFAK 235 (238)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~ 235 (238)
.+.+.+. ..+...+.+||--...... ...+.+..+.+|+.+
T Consensus 138 ~~a~~wg------s~lv~~g~~GHiN~~sG~g-------~wpeg~~~l~~~~s~ 178 (181)
T COG3545 138 DLANAWG------SALVDVGEGGHINAESGFG-------PWPEGYALLAQLLSR 178 (181)
T ss_pred HHHHhcc------HhheecccccccchhhcCC-------CcHHHHHHHHHHhhh
Confidence 9998872 3466677778855433221 123445555555544
No 140
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=98.66 E-value=5.9e-07 Score=77.36 Aligned_cols=195 Identities=18% Similarity=0.229 Sum_probs=133.6
Q ss_pred eeEEEec-C--CCCCeeEEEEeccCCC-CCchHHHHHHHHHHCCCEEEeccCCCCCccCCCCCcchHhhHh---hcCCCc
Q 026476 28 LNAYVTG-S--PDSKLAVLLISDVYGY-EAPNLRKLADKVAAAGFYVAVPDFFHGDPYVADGGKPLQEWIK---DHGVDK 100 (238)
Q Consensus 28 ~~~~~~~-p--~~~~~~vl~~hg~~g~-~~~~~~~~a~~l~~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~---~~~~~~ 100 (238)
++-++.. - ..+.|++|.-.|++.. ..+.+......+.++|..-+..+. ||.|--. .+|-. +....+
T Consensus 407 IPYFiv~K~~~~d~~pTll~aYGGF~vsltP~fs~~~~~WLerGg~~v~ANI-RGGGEfG------p~WH~Aa~k~nrq~ 479 (648)
T COG1505 407 IPYFIVRKGAKKDENPTLLYAYGGFNISLTPRFSGSRKLWLERGGVFVLANI-RGGGEFG------PEWHQAGMKENKQN 479 (648)
T ss_pred ccEEEEecCCcCCCCceEEEeccccccccCCccchhhHHHHhcCCeEEEEec-ccCCccC------HHHHHHHhhhcchh
Confidence 7777764 1 1246888888888862 235555666888999988888898 7765322 23321 333456
Q ss_pred chhcHHHHHHHHHhcC---CceEEEEEeeccHHHHHHcc-CCc-CceEEEEeccCC---------------------cCc
Q 026476 101 GFEEAKPVIQALKSKG---ITAIGAAGFCWGAKVVVQLG-KRE-FIQAAVLLHPSF---------------------VTV 154 (238)
Q Consensus 101 ~~~d~~~~~~~l~~~~---~~~i~l~G~S~GG~~a~~~a-~~~-~i~a~i~~~~~~---------------------~~~ 154 (238)
..+|..++.+.|.+++ ++++++.|-|-||.++.... ++| .+.|+++-.|.. ..+
T Consensus 480 vfdDf~AVaedLi~rgitspe~lgi~GgSNGGLLvg~alTQrPelfgA~v~evPllDMlRYh~l~aG~sW~~EYG~Pd~P 559 (648)
T COG1505 480 VFDDFIAVAEDLIKRGITSPEKLGIQGGSNGGLLVGAALTQRPELFGAAVCEVPLLDMLRYHLLTAGSSWIAEYGNPDDP 559 (648)
T ss_pred hhHHHHHHHHHHHHhCCCCHHHhhhccCCCCceEEEeeeccChhhhCceeeccchhhhhhhcccccchhhHhhcCCCCCH
Confidence 7899999999998884 57999999999999988744 666 455555543321 111
Q ss_pred cc------------cc--ccCCcEEEEecCCCCCCCHHhHHHHHHHHhhcCCCCceEEEcCCCCeeeeecCCCCCHHHHH
Q 026476 155 DD------------IK--GVEVPLSILGAEIDRLSPPALVKEFEEALNAKSGVDSFVKIFPKVAHGWTVRYNVEDETAVK 220 (238)
Q Consensus 155 ~~------------~~--~~~~P~L~i~g~~D~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~ 220 (238)
++ ++ +.=.|+||-.+..|.-|.|.++++++.+| ...+.++-+.+--++||+-..+..
T Consensus 560 ~d~~~l~~YSPy~nl~~g~kYP~~LITTs~~DDRVHPaHarKfaa~L-~e~~~pv~~~e~t~gGH~g~~~~~-------- 630 (648)
T COG1505 560 EDRAFLLAYSPYHNLKPGQKYPPTLITTSLHDDRVHPAHARKFAAKL-QEVGAPVLLREETKGGHGGAAPTA-------- 630 (648)
T ss_pred HHHHHHHhcCchhcCCccccCCCeEEEcccccccccchHHHHHHHHH-HhcCCceEEEeecCCcccCCCChH--------
Confidence 11 11 22359999999999988899999999999 456677777666677887644321
Q ss_pred HHHHHHHHHHHHHHHhcC
Q 026476 221 AAEEAHHNLLEWFAKYVK 238 (238)
Q Consensus 221 ~~~~~~~~~~~fl~~~~~ 238 (238)
...+.+..+..||.+.|.
T Consensus 631 ~~A~~~a~~~afl~r~L~ 648 (648)
T COG1505 631 EIARELADLLAFLLRTLG 648 (648)
T ss_pred HHHHHHHHHHHHHHHhhC
Confidence 234555678889988763
No 141
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=98.66 E-value=6.1e-07 Score=77.73 Aligned_cols=111 Identities=14% Similarity=0.088 Sum_probs=77.9
Q ss_pred eeEEEecCC--CCCeeEEEEec-cCCCC---CchHHHHHH---HHHHCCCEEEeccCCCCCccCCCCCcchHhhHhhcCC
Q 026476 28 LNAYVTGSP--DSKLAVLLISD-VYGYE---APNLRKLAD---KVAAAGFYVAVPDFFHGDPYVADGGKPLQEWIKDHGV 98 (238)
Q Consensus 28 ~~~~~~~p~--~~~~~vl~~hg-~~g~~---~~~~~~~a~---~l~~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~ 98 (238)
|.+-++.|+ ++.|+++..+. -+..+ ......+.. .++.+||+|+..|. ||.+.|.+. +....
T Consensus 32 L~~dIy~Pa~~g~~Pvll~~~~~Py~k~~~~~~~~~~~~p~~~~~aa~GYavV~qDv-RG~~~SeG~------~~~~~-- 102 (563)
T COG2936 32 LAADIYRPAGAGPLPVLLSRTRLPYRKRNGTFGPQLSALPQPAWFAAQGYAVVNQDV-RGRGGSEGV------FDPES-- 102 (563)
T ss_pred EEEEEEccCCCCCCceeEEeeccccccccccCcchhhcccccceeecCceEEEEecc-cccccCCcc------cceec--
Confidence 455556676 45577777771 11111 223344555 69999999999999 999888764 10011
Q ss_pred CcchhcHHHHHHHHHhc--CCceEEEEEeeccHHHHHHccC--CcCceEEEEe
Q 026476 99 DKGFEEAKPVIQALKSK--GITAIGAAGFCWGAKVVVQLGK--REFIQAAVLL 147 (238)
Q Consensus 99 ~~~~~d~~~~~~~l~~~--~~~~i~l~G~S~GG~~a~~~a~--~~~i~a~i~~ 147 (238)
.+-.+|..+.|+|+.++ ...+|+++|.|++|...+.+|. .|.+++++..
T Consensus 103 ~~E~~Dg~D~I~Wia~QpWsNG~Vgm~G~SY~g~tq~~~Aa~~pPaLkai~p~ 155 (563)
T COG2936 103 SREAEDGYDTIEWLAKQPWSNGNVGMLGLSYLGFTQLAAAALQPPALKAIAPT 155 (563)
T ss_pred cccccchhHHHHHHHhCCccCCeeeeecccHHHHHHHHHHhcCCchheeeccc
Confidence 13568999999999998 4679999999999999999773 4578887754
No 142
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=98.64 E-value=3.6e-06 Score=70.02 Aligned_cols=104 Identities=13% Similarity=0.191 Sum_probs=83.5
Q ss_pred CCceEEEEEeeccHHHHHHcc-CCcCceEEEEe-----------------cc-CCcC-----------------------
Q 026476 116 GITAIGAAGFCWGAKVVVQLG-KREFIQAAVLL-----------------HP-SFVT----------------------- 153 (238)
Q Consensus 116 ~~~~i~l~G~S~GG~~a~~~a-~~~~i~a~i~~-----------------~~-~~~~----------------------- 153 (238)
..++..+.|.|-=|.++++.| .+++|+|++-+ +| .+..
T Consensus 170 ~i~~FvV~GaSKRGWTtWltaa~D~RV~aivP~Vid~LN~~~~l~h~y~~yG~~ws~a~~dY~~~gi~~~l~tp~f~~L~ 249 (367)
T PF10142_consen 170 NIEKFVVTGASKRGWTTWLTAAVDPRVKAIVPIVIDVLNMKANLEHQYRSYGGNWSFAFQDYYNEGITQQLDTPEFDKLM 249 (367)
T ss_pred CccEEEEeCCchHhHHHHHhhccCcceeEEeeEEEccCCcHHHHHHHHHHhCCCCccchhhhhHhCchhhcCCHHHHHHH
Confidence 578999999999999999977 57799999865 23 2211
Q ss_pred -----cccccccCCcEEEEecCCCCCCCHHhHHHHHHHHhhcCCCCceEEEcCCCCeeeeecCCCCCHHHHHHHHHHHHH
Q 026476 154 -----VDDIKGVEVPLSILGAEIDRLSPPALVKEFEEALNAKSGVDSFVKIFPKVAHGWTVRYNVEDETAVKAAEEAHHN 228 (238)
Q Consensus 154 -----~~~~~~~~~P~L~i~g~~D~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~ 228 (238)
.....+++.|-++|.|.+|+++.++...-+++.| +| +..+..+|+++|+... ..+.+.
T Consensus 250 ~ivDP~~Y~~rL~~PK~ii~atgDeFf~pD~~~~y~d~L---~G-~K~lr~vPN~~H~~~~-------------~~~~~~ 312 (367)
T PF10142_consen 250 QIVDPYSYRDRLTMPKYIINATGDEFFVPDSSNFYYDKL---PG-EKYLRYVPNAGHSLIG-------------SDVVQS 312 (367)
T ss_pred HhcCHHHHHHhcCccEEEEecCCCceeccCchHHHHhhC---CC-CeeEEeCCCCCcccch-------------HHHHHH
Confidence 0114567899999999999999999999999988 45 5679999999999854 467778
Q ss_pred HHHHHHHh
Q 026476 229 LLEWFAKY 236 (238)
Q Consensus 229 ~~~fl~~~ 236 (238)
+..|++..
T Consensus 313 l~~f~~~~ 320 (367)
T PF10142_consen 313 LRAFYNRI 320 (367)
T ss_pred HHHHHHHH
Confidence 88888764
No 143
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=98.62 E-value=1.3e-07 Score=75.29 Aligned_cols=113 Identities=16% Similarity=0.274 Sum_probs=69.6
Q ss_pred HHHHHHHhc---CCceEEEEEeeccHHHHHHcc-CCc-CceEEEEeccCCcCc-------------c----------ccc
Q 026476 107 PVIQALKSK---GITAIGAAGFCWGAKVVVQLG-KRE-FIQAAVLLHPSFVTV-------------D----------DIK 158 (238)
Q Consensus 107 ~~~~~l~~~---~~~~i~l~G~S~GG~~a~~~a-~~~-~i~a~i~~~~~~~~~-------------~----------~~~ 158 (238)
+++.++++. ...+.+++|+||||..|+.++ .+| .+.++++++|..... . ...
T Consensus 101 el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~F~~~~~~S~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~ 180 (251)
T PF00756_consen 101 ELIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPDLFGAVIAFSGALDPSPSLWGPSDDEAWKENDPFDLIKALSQK 180 (251)
T ss_dssp HHHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTTTESEEEEESEESETTHCHHHHSTCGHHGGCHHHHHHHHHHHT
T ss_pred cchhHHHHhcccccceeEEeccCCCcHHHHHHHHhCccccccccccCccccccccccCcCCcHHhhhccHHHHhhhhhcc
Confidence 344455444 223389999999999999988 555 688888888542110 0 012
Q ss_pred ccCCcEEEEecCCCCCCC-H---------HhHHHHHHHHhhcCCCCceEEEcCCCCeeeeecCCCCCHHHHHHHHHHHHH
Q 026476 159 GVEVPLSILGAEIDRLSP-P---------ALVKEFEEALNAKSGVDSFVKIFPKVAHGWTVRYNVEDETAVKAAEEAHHN 228 (238)
Q Consensus 159 ~~~~P~L~i~g~~D~~~p-~---------~~~~~~~~~~~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~ 228 (238)
.-..++.+..|++|.... . +...++.+.+ ...+.+..++.++| +|.+ ...+..+..
T Consensus 181 ~~~~~i~l~~G~~d~~~~~~~~~~~~~~~~~~~~~~~~l-~~~g~~~~~~~~~G-~H~~------------~~W~~~l~~ 246 (251)
T PF00756_consen 181 KKPLRIYLDVGTKDEFGGWEDSAQILQFLANNRELAQLL-KAKGIPHTYHVFPG-GHDW------------AYWRRRLPD 246 (251)
T ss_dssp TSEEEEEEEEETTSTTHHCSHHHHHHHHHHHHHHHHHHC-CCEECTTESEEEHS-ESSH------------HHHHHHHHH
T ss_pred cCCCeEEEEeCCCCcccccccCHHHHHHHHHhHhhHHHH-HHcCCCceEEEecC-ccch------------hhHHHHHHH
Confidence 234578889999998432 1 1223333334 34456777888884 7776 245566666
Q ss_pred HHHHH
Q 026476 229 LLEWF 233 (238)
Q Consensus 229 ~~~fl 233 (238)
.+.||
T Consensus 247 ~L~~~ 251 (251)
T PF00756_consen 247 ALPWM 251 (251)
T ss_dssp HHHHH
T ss_pred HHhhC
Confidence 66664
No 144
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=98.61 E-value=8.8e-08 Score=74.19 Aligned_cols=88 Identities=18% Similarity=0.188 Sum_probs=54.6
Q ss_pred eeEEEEeccCCCCCchHHHHHHHHHHCCCE---EEeccCCCCCccCCCCCcchHhhHhhcCCCcchhcHHHHHHHHHhc-
Q 026476 40 LAVLLISDVYGYEAPNLRKLADKVAAAGFY---VAVPDFFHGDPYVADGGKPLQEWIKDHGVDKGFEEAKPVIQALKSK- 115 (238)
Q Consensus 40 ~~vl~~hg~~g~~~~~~~~~a~~l~~~G~~---v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~- 115 (238)
.+|||+||..+.....+..++..|.++||. ++++++ -...... ..... ....+..+++.++++.+++.
T Consensus 2 ~PVVlVHG~~~~~~~~w~~~~~~l~~~GY~~~~vya~ty-g~~~~~~-----~~~~~--~~~~~~~~~l~~fI~~Vl~~T 73 (219)
T PF01674_consen 2 RPVVLVHGTGGNAYSNWSTLAPYLKAAGYCDSEVYALTY-GSGNGSP-----SVQNA--HMSCESAKQLRAFIDAVLAYT 73 (219)
T ss_dssp --EEEE--TTTTTCGGCCHHHHHHHHTT--CCCEEEE---S-CCHHT-----HHHHH--HB-HHHHHHHHHHHHHHHHHH
T ss_pred CCEEEECCCCcchhhCHHHHHHHHHHcCCCcceeEeccC-CCCCCCC-----ccccc--ccchhhHHHHHHHHHHHHHhh
Confidence 479999999885557788999999999999 799997 2222111 00111 11223446788888888776
Q ss_pred CCceEEEEEeeccHHHHHHcc
Q 026476 116 GITAIGAAGFCWGAKVVVQLG 136 (238)
Q Consensus 116 ~~~~i~l~G~S~GG~~a~~~a 136 (238)
+. +|-|+||||||.++..+.
T Consensus 74 Ga-kVDIVgHS~G~~iaR~yi 93 (219)
T PF01674_consen 74 GA-KVDIVGHSMGGTIARYYI 93 (219)
T ss_dssp T---EEEEEETCHHHHHHHHH
T ss_pred CC-EEEEEEcCCcCHHHHHHH
Confidence 67 999999999999999865
No 145
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=98.57 E-value=4.5e-07 Score=71.01 Aligned_cols=102 Identities=18% Similarity=0.190 Sum_probs=62.6
Q ss_pred CCeeEEEEeccCCCCCchHHHHHHHHHH--------CCCEEEeccCCCCCccCCCCCcchHhhHhhcCCCcchhcHHHHH
Q 026476 38 SKLAVLLISDVYGYEAPNLRKLADKVAA--------AGFYVAVPDFFHGDPYVADGGKPLQEWIKDHGVDKGFEEAKPVI 109 (238)
Q Consensus 38 ~~~~vl~~hg~~g~~~~~~~~~a~~l~~--------~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 109 (238)
.+.+|||+||..|+. ...+.++..+.+ ..+.+++.|+ ........ +. ...+..+-+..++
T Consensus 3 ~g~pVlFIhG~~Gs~-~q~rsl~~~~~~~~~~~~~~~~~d~ft~df-~~~~s~~~-g~---------~l~~q~~~~~~~i 70 (225)
T PF07819_consen 3 SGIPVLFIHGNAGSY-KQVRSLASELQRKALLNDNSSHFDFFTVDF-NEELSAFH-GR---------TLQRQAEFLAEAI 70 (225)
T ss_pred CCCEEEEECcCCCCH-hHHHHHHHHHhhhhhhccCccceeEEEecc-Cccccccc-cc---------cHHHHHHHHHHHH
Confidence 357899999988874 566777766632 1577888887 33311110 01 1111223333344
Q ss_pred HHHHhc------CCceEEEEEeeccHHHHHHccCC-----cCceEEEEeccCC
Q 026476 110 QALKSK------GITAIGAAGFCWGAKVVVQLGKR-----EFIQAAVLLHPSF 151 (238)
Q Consensus 110 ~~l~~~------~~~~i~l~G~S~GG~~a~~~a~~-----~~i~a~i~~~~~~ 151 (238)
+.+.+. +..+|.++||||||.++..+... ..++.+|.+..+.
T Consensus 71 ~~i~~~~~~~~~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~tPh 123 (225)
T PF07819_consen 71 KYILELYKSNRPPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGTPH 123 (225)
T ss_pred HHHHHhhhhccCCCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEcCCC
Confidence 433221 46799999999999999886632 2588888886553
No 146
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=98.40 E-value=1.3e-06 Score=76.50 Aligned_cols=112 Identities=15% Similarity=0.147 Sum_probs=71.3
Q ss_pred eeEEEecCC-----CCCeeEEEEeccC---CCCCchHHHHHHHHHHC-C-CEEEeccCCC-CC-ccCCCCCcchHhhHhh
Q 026476 28 LNAYVTGSP-----DSKLAVLLISDVY---GYEAPNLRKLADKVAAA-G-FYVAVPDFFH-GD-PYVADGGKPLQEWIKD 95 (238)
Q Consensus 28 ~~~~~~~p~-----~~~~~vl~~hg~~---g~~~~~~~~~a~~l~~~-G-~~v~~~d~~~-g~-~~~~~~~~~~~~~~~~ 95 (238)
+...++.|. .+.|++|++||+. |... .. ....|+.. + ++|++++| | |. |....... .
T Consensus 79 l~l~i~~p~~~~~~~~~pv~v~ihGG~~~~g~~~-~~--~~~~~~~~~~~~~vv~~~y-Rlg~~g~~~~~~~-------~ 147 (493)
T cd00312 79 LYLNVYTPKNTKPGNSLPVMVWIHGGGFMFGSGS-LY--PGDGLAREGDNVIVVSINY-RLGVLGFLSTGDI-------E 147 (493)
T ss_pred CeEEEEeCCCCCCCCCCCEEEEEcCCccccCCCC-CC--ChHHHHhcCCCEEEEEecc-cccccccccCCCC-------C
Confidence 555555664 2358899999863 3321 11 23445544 3 99999999 4 43 22111000 1
Q ss_pred cCCCcchhcHHHHHHHHHhc------CCceEEEEEeeccHHHHHHccCC----cCceEEEEeccC
Q 026476 96 HGVDKGFEEAKPVIQALKSK------GITAIGAAGFCWGAKVVVQLGKR----EFIQAAVLLHPS 150 (238)
Q Consensus 96 ~~~~~~~~d~~~~~~~l~~~------~~~~i~l~G~S~GG~~a~~~a~~----~~i~a~i~~~~~ 150 (238)
......+.|...+++|+++. ++++|.++|+|.||.++..++.. +.++++|+.+|.
T Consensus 148 ~~~n~g~~D~~~al~wv~~~i~~fggd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg~ 212 (493)
T cd00312 148 LPGNYGLKDQRLALKWVQDNIAAFGGDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSGS 212 (493)
T ss_pred CCcchhHHHHHHHHHHHHHHHHHhCCCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcCC
Confidence 11233568999999999875 57899999999999999987643 246777777654
No 147
>COG0627 Predicted esterase [General function prediction only]
Probab=98.40 E-value=5.2e-06 Score=67.96 Aligned_cols=106 Identities=22% Similarity=0.265 Sum_probs=75.4
Q ss_pred eEEEEEeeccHHHHHHcc-CC-cCceEEEEeccCCcCc---------cc---------------------------cc--
Q 026476 119 AIGAAGFCWGAKVVVQLG-KR-EFIQAAVLLHPSFVTV---------DD---------------------------IK-- 158 (238)
Q Consensus 119 ~i~l~G~S~GG~~a~~~a-~~-~~i~a~i~~~~~~~~~---------~~---------------------------~~-- 158 (238)
+.+++||||||.-|+.+| .+ ++++.+..++|...+. .. ..
T Consensus 153 ~~aI~G~SMGG~GAl~lA~~~pd~f~~~sS~Sg~~~~s~~~~~~~~~~~~~g~~~~~~~~G~~~~~~w~~~D~~~~~~~l 232 (316)
T COG0627 153 GRAIAGHSMGGYGALKLALKHPDRFKSASSFSGILSPSSPWGPTLAMGDPWGGKAFNAMLGPDSDPAWQENDPLSLIEKL 232 (316)
T ss_pred CceeEEEeccchhhhhhhhhCcchhceeccccccccccccccccccccccccCccHHHhcCCCccccccccCchhHHHHh
Confidence 789999999999999988 55 3666666665543221 00 11
Q ss_pred --c----------cCCcEEEEecCCCCCCC--HHhHHHHHHHHhhcCCCCceEEEcCCCCeeeeecCCCCCHHHHHHHHH
Q 026476 159 --G----------VEVPLSILGAEIDRLSP--PALVKEFEEALNAKSGVDSFVKIFPKVAHGWTVRYNVEDETAVKAAEE 224 (238)
Q Consensus 159 --~----------~~~P~L~i~g~~D~~~p--~~~~~~~~~~~~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~ 224 (238)
. ...++++-+|..|.+.. ......+.+++ ++.|.+.++...++..|++. ....
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~d~g~ad~~~~~~~~~~~~~~~a~-~~~g~~~~~~~~~~G~Hsw~------------~w~~ 299 (316)
T COG0627 233 VANANTRIWVYGGSPPELLIDNGPADFFLAANNLSTRAFAEAL-RAAGIPNGVRDQPGGDHSWY------------FWAS 299 (316)
T ss_pred hhcccccceecccCCCccccccccchhhhhhcccCHHHHHHHH-HhcCCCceeeeCCCCCcCHH------------HHHH
Confidence 1 34677777898888764 33467788888 56677888888877899983 4677
Q ss_pred HHHHHHHHHHHhc
Q 026476 225 AHHNLLEWFAKYV 237 (238)
Q Consensus 225 ~~~~~~~fl~~~~ 237 (238)
.++..+.|+.+.+
T Consensus 300 ~l~~~~~~~a~~l 312 (316)
T COG0627 300 QLADHLPWLAGAL 312 (316)
T ss_pred HHHHHHHHHHHHh
Confidence 8888888888765
No 148
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=98.38 E-value=5.1e-06 Score=67.14 Aligned_cols=200 Identities=17% Similarity=0.094 Sum_probs=113.7
Q ss_pred eeEEEecCC-----CCCeeEEEEeccCCCCCchHHHHHHHHHHCCCEEEeccC---------CCCCccCCCCCcchHhh-
Q 026476 28 LNAYVTGSP-----DSKLAVLLISDVYGYEAPNLRKLADKVAAAGFYVAVPDF---------FHGDPYVADGGKPLQEW- 92 (238)
Q Consensus 28 ~~~~~~~p~-----~~~~~vl~~hg~~g~~~~~~~~~a~~l~~~G~~v~~~d~---------~~g~~~~~~~~~~~~~~- 92 (238)
+.+.+..|. .+.|.+++.|+..+... .....+..++..++.++..+. .+|..............
T Consensus 33 ~~~~l~~p~~~~~~~~~p~v~~~h~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 111 (299)
T COG1073 33 LAAVLHLPPSGNEEKKLPAVVFLHGFGSSKE-QSLGYAVLLAEKGYRVLAGDASLFGESGGDPRGLADSEGYAEDFSAAV 111 (299)
T ss_pred eeeEEEecCCCCccccCceEEeccCcccccc-CcchHHHHhhhceeEEeeeccccccccccccccccCccccccccchhh
Confidence 455555554 24578999999877643 334488889999999888874 12221111110000000
Q ss_pred ----------------Hh---hcCCCcchhcHHHHHHHHHhc----CCceEEEEEeeccHHHHHHccCC------cCceE
Q 026476 93 ----------------IK---DHGVDKGFEEAKPVIQALKSK----GITAIGAAGFCWGAKVVVQLGKR------EFIQA 143 (238)
Q Consensus 93 ----------------~~---~~~~~~~~~d~~~~~~~l~~~----~~~~i~l~G~S~GG~~a~~~a~~------~~i~a 143 (238)
.. .........+...+..++... ...++.++|.|+||..++..... ..+..
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~g~~~~~~~~~~~~~~~~~~~~~ 191 (299)
T COG1073 112 LLLLSEGVLDKDYRLLGASLGPRILAGLSLGGPSAGALLAWGPTRLDASRIVVWGESLGGALALLLLGANPELARELIDY 191 (299)
T ss_pred eeeeccccccHHHHHHhhhcCcceEEEEEeeccchHHHhhcchhHHHhhcccceeeccCceeeccccccchHHHHhhhhh
Confidence 00 000011112233333333322 24478888888888888774321 00000
Q ss_pred EE-------------Eecc---------CCcCcccccccC-CcEEEEecCCCCCCCHHhHHHHHHHHhhcCCCCceEEEc
Q 026476 144 AV-------------LLHP---------SFVTVDDIKGVE-VPLSILGAEIDRLSPPALVKEFEEALNAKSGVDSFVKIF 200 (238)
Q Consensus 144 ~i-------------~~~~---------~~~~~~~~~~~~-~P~L~i~g~~D~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 200 (238)
.+ .+.. .......+..+. +|+|+++|.+|.++|......+++..+ .. +.+...+
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~i~~~P~l~~~G~~D~~vp~~~~~~~~~~~~-~~--~~~~~~~ 268 (299)
T COG1073 192 LITPGGFAPLPAPEAPLDTLPLRAVLLLLLDPFDDAEKISPRPVLLVHGERDEVVPLRDAEDLYEAAR-ER--PKKLLFV 268 (299)
T ss_pred hccCCCCCCCCcccccccccccchhhhccCcchhhHhhcCCcceEEEecCCCcccchhhhHHHHhhhc-cC--CceEEEe
Confidence 00 0000 000112234455 699999999999999999999998873 21 5567788
Q ss_pred CCCCeeeeecCCCCCHHHHHHHHHHHHHHHHHHHHhcC
Q 026476 201 PKVAHGWTVRYNVEDETAVKAAEEAHHNLLEWFAKYVK 238 (238)
Q Consensus 201 ~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~ 238 (238)
+++.|........ ..++.++++.+||.+++.
T Consensus 269 ~~~~H~~~~~~~~-------~~~~~~~~~~~f~~~~l~ 299 (299)
T COG1073 269 PGGGHIDLYDNPP-------AVEQALDKLAEFLERHLL 299 (299)
T ss_pred cCCccccccCccH-------HHHHHHHHHHHHHHHhcC
Confidence 8889988753221 456899999999999863
No 149
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=98.37 E-value=2.7e-05 Score=64.69 Aligned_cols=112 Identities=13% Similarity=0.159 Sum_probs=69.6
Q ss_pred CeeEEEec-CCC----CCeeEEEEeccC---CCCCchHHHHHHHHHHC--CCEEEeccCCCCCccCCCCCcchHhhHhhc
Q 026476 27 GLNAYVTG-SPD----SKLAVLLISDVY---GYEAPNLRKLADKVAAA--GFYVAVPDFFHGDPYVADGGKPLQEWIKDH 96 (238)
Q Consensus 27 ~~~~~~~~-p~~----~~~~vl~~hg~~---g~~~~~~~~~a~~l~~~--G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~ 96 (238)
.-..|+.. |.. ..|.||.+||++ +.. +....+...+... ..++++.|| .-..... ...
T Consensus 105 ~~s~Wlvk~P~~~~pk~DpVlIYlHGGGY~l~~~-p~qi~~L~~i~~~l~~~SILvLDY-sLt~~~~----------~~~ 172 (374)
T PF10340_consen 105 SQSYWLVKAPNRFKPKSDPVLIYLHGGGYFLGTT-PSQIEFLLNIYKLLPEVSILVLDY-SLTSSDE----------HGH 172 (374)
T ss_pred cceEEEEeCCcccCCCCCcEEEEEcCCeeEecCC-HHHHHHHHHHHHHcCCCeEEEEec-ccccccc----------CCC
Confidence 33467776 653 358888999853 221 1111222222221 568999998 2211000 122
Q ss_pred CCCcchhcHHHHHHHHH-hcCCceEEEEEeeccHHHHHHccC---C----cCceEEEEeccC
Q 026476 97 GVDKGFEEAKPVIQALK-SKGITAIGAAGFCWGAKVVVQLGK---R----EFIQAAVLLHPS 150 (238)
Q Consensus 97 ~~~~~~~d~~~~~~~l~-~~~~~~i~l~G~S~GG~~a~~~a~---~----~~i~a~i~~~~~ 150 (238)
....++.++.+..+.|. +.+.++|.++|-|.||.+++.+.. + +..+.+|+++|.
T Consensus 173 ~yPtQL~qlv~~Y~~Lv~~~G~~nI~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPW 234 (374)
T PF10340_consen 173 KYPTQLRQLVATYDYLVESEGNKNIILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPW 234 (374)
T ss_pred cCchHHHHHHHHHHHHHhccCCCeEEEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCC
Confidence 34557788888888887 568889999999999999998652 2 246788888765
No 150
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=98.36 E-value=5.5e-06 Score=70.56 Aligned_cols=54 Identities=19% Similarity=0.387 Sum_probs=40.2
Q ss_pred ccccCCcEEEEecCCCCCCCHHhHHHH-------HHHHhhcCCCCceEEEcCCCCe-eeeecC
Q 026476 157 IKGVEVPLSILGAEIDRLSPPALVKEF-------EEALNAKSGVDSFVKIFPKVAH-GWTVRY 211 (238)
Q Consensus 157 ~~~~~~P~L~i~g~~D~~~p~~~~~~~-------~~~~~~~~~~~~~~~~~~g~~H-~~~~~~ 211 (238)
+++|++|+.++.|..|.++|++++..+ .+.+ ...|....+.+-+..|| |++...
T Consensus 293 Lr~Ir~Piivfas~gDnITPP~QaL~WI~dlY~~~~ei-~a~gQ~IVY~~h~~vGHLGIFVS~ 354 (581)
T PF11339_consen 293 LRNIRSPIIVFASYGDNITPPQQALNWIPDLYPDTEEI-KAAGQTIVYLLHESVGHLGIFVSG 354 (581)
T ss_pred hhhCCCCEEEEeccCCCCCChhHhccchHhhcCCHHHH-HhCCCEEEEEecCCCCceEEEecc
Confidence 788999999999999999999988433 3444 34555555666777888 776543
No 151
>COG3150 Predicted esterase [General function prediction only]
Probab=98.32 E-value=1.1e-05 Score=58.80 Aligned_cols=98 Identities=12% Similarity=0.095 Sum_probs=62.9
Q ss_pred CCceEEEEEeeccHHHHHHccCCcCceEEEEeccCCcCc-----------------------c--------ccccc-CCc
Q 026476 116 GITAIGAAGFCWGAKVVVQLGKREFIQAAVLLHPSFVTV-----------------------D--------DIKGV-EVP 163 (238)
Q Consensus 116 ~~~~i~l~G~S~GG~~a~~~a~~~~i~a~i~~~~~~~~~-----------------------~--------~~~~~-~~P 163 (238)
+...++++|-|+||+.|.+++..-.+++++. +|...+. . .+..+ +..
T Consensus 57 ~~~~p~ivGssLGGY~At~l~~~~Girav~~-NPav~P~e~l~gylg~~en~ytg~~y~le~~hI~~l~~~~~~~l~~p~ 135 (191)
T COG3150 57 GDESPLIVGSSLGGYYATWLGFLCGIRAVVF-NPAVRPYELLTGYLGRPENPYTGQEYVLESRHIATLCVLQFRELNRPR 135 (191)
T ss_pred CCCCceEEeecchHHHHHHHHHHhCChhhhc-CCCcCchhhhhhhcCCCCCCCCcceEEeehhhHHHHHHhhccccCCCc
Confidence 4445899999999999999997777777764 3322210 0 01222 234
Q ss_pred EEEEecCC-CCCCCHHhHHHHHHHHhhcCCCCceEEEcCCCCeeeeecCCCCCHHHHHHHHHHHHHHHHHHH
Q 026476 164 LSILGAEI-DRLSPPALVKEFEEALNAKSGVDSFVKIFPKVAHGWTVRYNVEDETAVKAAEEAHHNLLEWFA 234 (238)
Q Consensus 164 ~L~i~g~~-D~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~ 234 (238)
.+++.... |.+....++...+..+ ...+..|..|+|.. .++.++.+..|+.
T Consensus 136 ~~~lL~qtgDEvLDyr~a~a~y~~~--------~~~V~dgg~H~F~~------------f~~~l~~i~aF~g 187 (191)
T COG3150 136 CLVLLSQTGDEVLDYRQAVAYYHPC--------YEIVWDGGDHKFKG------------FSRHLQRIKAFKG 187 (191)
T ss_pred EEEeecccccHHHHHHHHHHHhhhh--------hheeecCCCccccc------------hHHhHHHHHHHhc
Confidence 55555555 8877655554444433 35567788999954 4678888888874
No 152
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=98.31 E-value=2.5e-05 Score=64.58 Aligned_cols=83 Identities=16% Similarity=0.185 Sum_probs=65.6
Q ss_pred CCeeEEEEeccCCCCCchHHHHHHHHHHCCCEEEeccCCCCCccCCCCCcchHhhHhhcCCCcchhcHHHHHHHHHhc-C
Q 026476 38 SKLAVLLISDVYGYEAPNLRKLADKVAAAGFYVAVPDFFHGDPYVADGGKPLQEWIKDHGVDKGFEEAKPVIQALKSK-G 116 (238)
Q Consensus 38 ~~~~vl~~hg~~g~~~~~~~~~a~~l~~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~-~ 116 (238)
.....||+.|-.|+. .--+.++..|.++|+.|+-+|. -++-|+ ..++++...|+..++++.+.+ +
T Consensus 259 sd~~av~~SGDGGWr-~lDk~v~~~l~~~gvpVvGvds-LRYfW~------------~rtPe~~a~Dl~r~i~~y~~~w~ 324 (456)
T COG3946 259 SDTVAVFYSGDGGWR-DLDKEVAEALQKQGVPVVGVDS-LRYFWS------------ERTPEQIAADLSRLIRFYARRWG 324 (456)
T ss_pred cceEEEEEecCCchh-hhhHHHHHHHHHCCCceeeeeh-hhhhhc------------cCCHHHHHHHHHHHHHHHHHhhC
Confidence 345677888877775 5668999999999999999998 344333 335566788999999988776 7
Q ss_pred CceEEEEEeeccHHHHHH
Q 026476 117 ITAIGAAGFCWGAKVVVQ 134 (238)
Q Consensus 117 ~~~i~l~G~S~GG~~a~~ 134 (238)
..++.++|+|+|+-+--.
T Consensus 325 ~~~~~liGySfGADvlP~ 342 (456)
T COG3946 325 AKRVLLIGYSFGADVLPF 342 (456)
T ss_pred cceEEEEeecccchhhHH
Confidence 889999999999987654
No 153
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=98.30 E-value=3.4e-05 Score=60.02 Aligned_cols=182 Identities=13% Similarity=0.122 Sum_probs=112.2
Q ss_pred eeEEEEeccCCCCCchHHHHHHHHHHCC-----CEEEeccCCCCCccCCCC-Ccc----hHhh---HhhcCCCcchhcHH
Q 026476 40 LAVLLISDVYGYEAPNLRKLADKVAAAG-----FYVAVPDFFHGDPYVADG-GKP----LQEW---IKDHGVDKGFEEAK 106 (238)
Q Consensus 40 ~~vl~~hg~~g~~~~~~~~~a~~l~~~G-----~~v~~~d~~~g~~~~~~~-~~~----~~~~---~~~~~~~~~~~d~~ 106 (238)
-+.|++||..|.. ..++.+++.|.+.+ -.++.+|. .|.-...+. .+. .-++ ..+........-++
T Consensus 46 iPTIfIhGsgG~a-sS~~~Mv~ql~~~~~~~~e~Lt~~V~~-dgslk~tGk~~Kd~~nP~I~~gfe~n~~s~~~~s~wlk 123 (288)
T COG4814 46 IPTIFIHGSGGTA-SSLNGMVNQLLPDYKAGTESLTMTVDV-DGSLKVTGKISKDAKNPIIEFGFEDNTASGLDQSKWLK 123 (288)
T ss_pred cceEEEecCCCCh-hHHHHHHHHhhhcccccccceEEEEcC-CCcEEEeeeecccCCCCeEEEEEecCcCchhhHHHHHH
Confidence 4689999988874 67899999998875 34566665 553111110 000 0000 01112234455677
Q ss_pred HHHHHHHhc-CCceEEEEEeeccHHHHHHccC-------CcCceEEEEeccCCc-C----ccc-----------------
Q 026476 107 PVIQALKSK-GITAIGAAGFCWGAKVVVQLGK-------REFIQAAVLLHPSFV-T----VDD----------------- 156 (238)
Q Consensus 107 ~~~~~l~~~-~~~~i~l~G~S~GG~~a~~~a~-------~~~i~a~i~~~~~~~-~----~~~----------------- 156 (238)
.++.+|+++ +..++-++||||||.....++. .|.++..|.+.+.+. . .+.
T Consensus 124 ~~msyL~~~Y~i~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gpfN~~~l~~de~v~~v~~~~~~~~~t~y~ 203 (288)
T COG4814 124 KAMSYLQKHYNIPKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGPFNVGNLVPDETVTDVLKDGPGLIKTPYY 203 (288)
T ss_pred HHHHHHHHhcCCceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEecccccccccCCCcchheeeccCccccCcHHH
Confidence 888888877 7889999999999998887652 357888888877654 0 000
Q ss_pred ------cc--ccCCcEEEEecCCC------CCCCHHhHHHHHHHHhhcCCCCceEEEcCC--CCeeeeecCCCCCHHHHH
Q 026476 157 ------IK--GVEVPLSILGAEID------RLSPPALVKEFEEALNAKSGVDSFVKIFPK--VAHGWTVRYNVEDETAVK 220 (238)
Q Consensus 157 ------~~--~~~~P~L~i~g~~D------~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g--~~H~~~~~~~~~~~~~~~ 220 (238)
.. .-..-+|+|.|+-| ..||...+...+..+ ...+..+...+|+| +.|.-....
T Consensus 204 ~y~~~n~k~v~~~~evl~IaGDl~dg~~tDG~Vp~assls~~~lf-~~~~ksy~e~~~~Gk~a~Hs~lhen--------- 273 (288)
T COG4814 204 DYIAKNYKKVSPNTEVLLIAGDLDDGKQTDGAVPWASSLSIYHLF-KKNGKSYIESLYKGKDARHSKLHEN--------- 273 (288)
T ss_pred HHHHhcceeCCCCcEEEEEecccccCCcCCCceechHhHHHHHHh-ccCcceeEEEeeeCCcchhhccCCC---------
Confidence 00 11346899999865 456777777777777 34444555556775 356654322
Q ss_pred HHHHHHHHHHHHHHH
Q 026476 221 AAEEAHHNLLEWFAK 235 (238)
Q Consensus 221 ~~~~~~~~~~~fl~~ 235 (238)
..+.+.+..||-+
T Consensus 274 --~~v~~yv~~FLw~ 286 (288)
T COG4814 274 --PTVAKYVKNFLWE 286 (288)
T ss_pred --hhHHHHHHHHhhc
Confidence 3466667777643
No 154
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=98.28 E-value=6.7e-05 Score=60.06 Aligned_cols=169 Identities=17% Similarity=0.176 Sum_probs=91.9
Q ss_pred CCeeEEEecCCC-----CCeeEEEEeccCCCCCchHHHHHHHHHHCC----CEEEeccCCCCCccCCCCCcchHhhHhhc
Q 026476 26 GGLNAYVTGSPD-----SKLAVLLISDVYGYEAPNLRKLADKVAAAG----FYVAVPDFFHGDPYVADGGKPLQEWIKDH 96 (238)
Q Consensus 26 ~~~~~~~~~p~~-----~~~~vl~~hg~~g~~~~~~~~~a~~l~~~G----~~v~~~d~~~g~~~~~~~~~~~~~~~~~~ 96 (238)
++...+++.|.+ +.|.++++||-.-.+....-...+.|...| -.++.+|+ ... ...+..-.
T Consensus 80 ~~~~~vv~lppgy~~~~k~pvl~~~DG~~~~~~g~i~~~~dsli~~g~i~pai~vgid~--~d~--------~~R~~~~~ 149 (299)
T COG2382 80 SERRRVVYLPPGYNPLEKYPVLYLQDGQDWFRSGRIPRILDSLIAAGEIPPAILVGIDY--IDV--------KKRREELH 149 (299)
T ss_pred cceeEEEEeCCCCCccccccEEEEeccHHHHhcCChHHHHHHHHHcCCCCCceEEecCC--CCH--------HHHHHHhc
Confidence 345555555542 346777888643222233445556666554 56666775 110 00010000
Q ss_pred CCCcchhc-HHHHHHHHHhc-----CCceEEEEEeeccHHHHHHcc-CCc-CceEEEEeccCCcCcc-------------
Q 026476 97 GVDKGFEE-AKPVIQALKSK-----GITAIGAAGFCWGAKVVVQLG-KRE-FIQAAVLLHPSFVTVD------------- 155 (238)
Q Consensus 97 ~~~~~~~d-~~~~~~~l~~~-----~~~~i~l~G~S~GG~~a~~~a-~~~-~i~a~i~~~~~~~~~~------------- 155 (238)
......+. +.+++=++++. ....-+|+|-|+||.+++..+ ..| .+..++..+|......
T Consensus 150 ~n~~~~~~L~~eLlP~v~~~yp~~~~a~~r~L~G~SlGG~vsL~agl~~Pe~FG~V~s~Sps~~~~~~~~~~~~~~~~~l 229 (299)
T COG2382 150 CNEAYWRFLAQELLPYVEERYPTSADADGRVLAGDSLGGLVSLYAGLRHPERFGHVLSQSGSFWWTPLDTQPQGEVAESL 229 (299)
T ss_pred ccHHHHHHHHHHhhhhhhccCcccccCCCcEEeccccccHHHHHHHhcCchhhceeeccCCccccCccccccccchhhhh
Confidence 11111111 23334445443 345678999999999999988 455 5666666666543210
Q ss_pred ----cccccCCcEEEEecCCCCCCCHHhHHHHHHHHhhcCCCCceEEEcCCCCeeee
Q 026476 156 ----DIKGVEVPLSILGAEIDRLSPPALVKEFEEALNAKSGVDSFVKIFPKVAHGWT 208 (238)
Q Consensus 156 ----~~~~~~~P~L~i~g~~D~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~H~~~ 208 (238)
.......-++...++.+.+.+ ..+++++.+ .+.+.++.+..|+| +|.+.
T Consensus 230 ~~~~a~~~~~~~~l~~g~~~~~~~~--pNr~L~~~L-~~~g~~~~yre~~G-gHdw~ 282 (299)
T COG2382 230 KILHAIGTDERIVLTTGGEEGDFLR--PNRALAAQL-EKKGIPYYYREYPG-GHDWA 282 (299)
T ss_pred hhhhccCccceEEeecCCccccccc--hhHHHHHHH-HhcCCcceeeecCC-CCchh
Confidence 011112233444444444544 466788888 56788999999997 99883
No 155
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=98.27 E-value=4.2e-06 Score=71.00 Aligned_cols=118 Identities=13% Similarity=0.102 Sum_probs=74.5
Q ss_pred eeEEEecCC---CCCeeEEEEeccC---CCCCchHHHHHHHHHHCC-CEEEeccCCCCC-ccCCCCCcchHhhH--hhcC
Q 026476 28 LNAYVTGSP---DSKLAVLLISDVY---GYEAPNLRKLADKVAAAG-FYVAVPDFFHGD-PYVADGGKPLQEWI--KDHG 97 (238)
Q Consensus 28 ~~~~~~~p~---~~~~~vl~~hg~~---g~~~~~~~~~a~~l~~~G-~~v~~~d~~~g~-~~~~~~~~~~~~~~--~~~~ 97 (238)
+..-++.|+ .+.|++|.|||+. |+.... ..=...|+++| ++||+++|.-|. |.-.-. .+. +...
T Consensus 80 L~LNIwaP~~~a~~~PVmV~IHGG~y~~Gs~s~~-~ydgs~La~~g~vVvVSvNYRLG~lGfL~~~-----~~~~~~~~~ 153 (491)
T COG2272 80 LYLNIWAPEVPAEKLPVMVYIHGGGYIMGSGSEP-LYDGSALAARGDVVVVSVNYRLGALGFLDLS-----SLDTEDAFA 153 (491)
T ss_pred eeEEeeccCCCCCCCcEEEEEeccccccCCCccc-ccChHHHHhcCCEEEEEeCcccccceeeehh-----hcccccccc
Confidence 555555565 3458899999854 332221 23446788887 999999984232 221110 000 0111
Q ss_pred CCcchhcHHHHHHHHHhc------CCceEEEEEeeccHHHHHHccCCc----CceEEEEeccCC
Q 026476 98 VDKGFEEAKPVIQALKSK------GITAIGAAGFCWGAKVVVQLGKRE----FIQAAVLLHPSF 151 (238)
Q Consensus 98 ~~~~~~d~~~~~~~l~~~------~~~~i~l~G~S~GG~~a~~~a~~~----~i~a~i~~~~~~ 151 (238)
..-.+.|...+++|+++. |+++|.|+|.|.|++.++.+.+.| .++.+|+.+|..
T Consensus 154 ~n~Gl~DqilALkWV~~NIe~FGGDp~NVTl~GeSAGa~si~~Lla~P~AkGLF~rAi~~Sg~~ 217 (491)
T COG2272 154 SNLGLLDQILALKWVRDNIEAFGGDPQNVTLFGESAGAASILTLLAVPSAKGLFHRAIALSGAA 217 (491)
T ss_pred ccccHHHHHHHHHHHHHHHHHhCCCccceEEeeccchHHHHHHhhcCccchHHHHHHHHhCCCC
Confidence 123678999999999876 688999999999999999876544 344555555443
No 156
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=98.21 E-value=8.4e-06 Score=71.91 Aligned_cols=107 Identities=15% Similarity=0.103 Sum_probs=65.8
Q ss_pred CeeEEEEeccC---CCCCchHHHHHHHHHHCCCEEEeccCCCCC-ccCCCCCcchHhhHhhcCCCcchhcHHHHHHHHHh
Q 026476 39 KLAVLLISDVY---GYEAPNLRKLADKVAAAGFYVAVPDFFHGD-PYVADGGKPLQEWIKDHGVDKGFEEAKPVIQALKS 114 (238)
Q Consensus 39 ~~~vl~~hg~~---g~~~~~~~~~a~~l~~~G~~v~~~d~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~ 114 (238)
.|++|++||+. |........-...++..+++||+++|+-|. |.-........ .....+.|...+++|+++
T Consensus 125 lPV~v~ihGG~f~~G~~~~~~~~~~~~~~~~~vivVt~nYRlg~~Gfl~~~~~~~~------~gN~Gl~Dq~~AL~WV~~ 198 (535)
T PF00135_consen 125 LPVMVWIHGGGFMFGSGSFPPYDGASLAASKDVIVVTINYRLGAFGFLSLGDLDAP------SGNYGLLDQRLALKWVQD 198 (535)
T ss_dssp EEEEEEE--STTTSSCTTSGGGHTHHHHHHHTSEEEEE----HHHHH-BSSSTTSH------BSTHHHHHHHHHHHHHHH
T ss_pred cceEEEeecccccCCCcccccccccccccCCCEEEEEecccccccccccccccccC------chhhhhhhhHHHHHHHHh
Confidence 48889999854 332112334455567789999999993221 22111100000 123467899999999998
Q ss_pred c------CCceEEEEEeeccHHHHHHcc-C---CcCceEEEEeccCC
Q 026476 115 K------GITAIGAAGFCWGAKVVVQLG-K---REFIQAAVLLHPSF 151 (238)
Q Consensus 115 ~------~~~~i~l~G~S~GG~~a~~~a-~---~~~i~a~i~~~~~~ 151 (238)
. |+++|.|+|+|.||..+..+. . ++.++.+|+.+|..
T Consensus 199 nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SGs~ 245 (535)
T PF00135_consen 199 NIAAFGGDPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSGSA 245 (535)
T ss_dssp HGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES--T
T ss_pred hhhhcccCCcceeeeeecccccccceeeecccccccccccccccccc
Confidence 6 578999999999999999855 2 34699999998843
No 157
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=98.19 E-value=7.1e-06 Score=70.23 Aligned_cols=88 Identities=9% Similarity=0.160 Sum_probs=63.2
Q ss_pred chHHHHHHHHHHCCCEEEeccCCCCCccCCCCCcchHhhHhhcCCCcchhcHHHHHHHHHhc-CCceEEEEEeeccHHHH
Q 026476 54 PNLRKLADKVAAAGFYVAVPDFFHGDPYVADGGKPLQEWIKDHGVDKGFEEAKPVIQALKSK-GITAIGAAGFCWGAKVV 132 (238)
Q Consensus 54 ~~~~~~a~~l~~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~-~~~~i~l~G~S~GG~~a 132 (238)
..+..+.+.|.+.||.+ ..|+ .|.+++... ........+++.+.++.+.+. +..++.++||||||.++
T Consensus 108 ~~~~~li~~L~~~GY~~-~~dL-~g~gYDwR~---------~~~~~~~~~~Lk~lIe~~~~~~g~~kV~LVGHSMGGlva 176 (440)
T PLN02733 108 YYFHDMIEQLIKWGYKE-GKTL-FGFGYDFRQ---------SNRLPETMDGLKKKLETVYKASGGKKVNIISHSMGGLLV 176 (440)
T ss_pred HHHHHHHHHHHHcCCcc-CCCc-ccCCCCccc---------cccHHHHHHHHHHHHHHHHHHcCCCCEEEEEECHhHHHH
Confidence 56789999999999866 7788 777766421 001123456777777766554 56799999999999999
Q ss_pred HHcc-CCc-----CceEEEEeccCCc
Q 026476 133 VQLG-KRE-----FIQAAVLLHPSFV 152 (238)
Q Consensus 133 ~~~a-~~~-----~i~a~i~~~~~~~ 152 (238)
+.++ ..+ .|+..|.+.+++.
T Consensus 177 ~~fl~~~p~~~~k~I~~~I~la~P~~ 202 (440)
T PLN02733 177 KCFMSLHSDVFEKYVNSWIAIAAPFQ 202 (440)
T ss_pred HHHHHHCCHhHHhHhccEEEECCCCC
Confidence 9866 333 4788888876544
No 158
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=98.18 E-value=1.6e-05 Score=69.60 Aligned_cols=167 Identities=13% Similarity=0.087 Sum_probs=108.0
Q ss_pred CCCeeEEEEeccCCCC-CchHHHHHHHHHHCCCEEEeccCCCCCccCCCCCcchHhhHhhcCCCcchhcHHHHHHHHHhc
Q 026476 37 DSKLAVLLISDVYGYE-APNLRKLADKVAAAGFYVAVPDFFHGDPYVADGGKPLQEWIKDHGVDKGFEEAKPVIQALKSK 115 (238)
Q Consensus 37 ~~~~~vl~~hg~~g~~-~~~~~~~a~~l~~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~ 115 (238)
++.|.+|...|.+|.+ .+.+....-.|..+|++-....- ||.+.-...+...+....+ ..-..|..++.++|.+.
T Consensus 446 g~~p~lLygYGaYG~s~~p~Fs~~~lSLlDRGfiyAIAHV-RGGgelG~~WYe~GK~l~K---~NTf~DFIa~a~~Lv~~ 521 (682)
T COG1770 446 GSAPLLLYGYGAYGISMDPSFSIARLSLLDRGFVYAIAHV-RGGGELGRAWYEDGKLLNK---KNTFTDFIAAARHLVKE 521 (682)
T ss_pred CCCcEEEEEeccccccCCcCcccceeeeecCceEEEEEEe-ecccccChHHHHhhhhhhc---cccHHHHHHHHHHHHHc
Confidence 3458888899988843 24455556668889998777777 7765443222222222221 34568889999988877
Q ss_pred ---CCceEEEEEeeccHHHHHHcc-CCc-CceEEEEeccCCcC---------------------c---------------
Q 026476 116 ---GITAIGAAGFCWGAKVVVQLG-KRE-FIQAAVLLHPSFVT---------------------V--------------- 154 (238)
Q Consensus 116 ---~~~~i~l~G~S~GG~~a~~~a-~~~-~i~a~i~~~~~~~~---------------------~--------------- 154 (238)
..++|+++|-|.||+++..++ ..| .++++|+..|-... +
T Consensus 522 g~~~~~~i~a~GGSAGGmLmGav~N~~P~lf~~iiA~VPFVDvltTMlD~slPLT~~E~~EWGNP~d~e~y~yikSYSPY 601 (682)
T COG1770 522 GYTSPDRIVAIGGSAGGMLMGAVANMAPDLFAGIIAQVPFVDVLTTMLDPSLPLTVTEWDEWGNPLDPEYYDYIKSYSPY 601 (682)
T ss_pred CcCCccceEEeccCchhHHHHHHHhhChhhhhheeecCCccchhhhhcCCCCCCCccchhhhCCcCCHHHHHHHhhcCch
Confidence 367999999999999999976 455 56666654432110 0
Q ss_pred ccc-cccCCcEEEEecCCCCCCCHHhHHHHHHHHhhc-CC-CCceEEEcCCCCeee
Q 026476 155 DDI-KGVEVPLSILGAEIDRLSPPALVKEFEEALNAK-SG-VDSFVKIFPKVAHGW 207 (238)
Q Consensus 155 ~~~-~~~~~P~L~i~g~~D~~~p~~~~~~~~~~~~~~-~~-~~~~~~~~~g~~H~~ 207 (238)
+.+ ++.-.|+|++.|.+|+-|......+...+|+.. .+ .++-++.-=.+||+=
T Consensus 602 dNV~a~~YP~ilv~~Gl~D~rV~YwEpAKWvAkLR~~~td~~plLlkt~M~aGHgG 657 (682)
T COG1770 602 DNVEAQPYPAILVTTGLNDPRVQYWEPAKWVAKLRELKTDGNPLLLKTNMDAGHGG 657 (682)
T ss_pred hccccCCCCceEEEccccCCccccchHHHHHHHHhhcccCCCcEEEEecccccCCC
Confidence 001 233458999999999999887777777777421 22 245555523478854
No 159
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=98.17 E-value=9.4e-06 Score=67.12 Aligned_cols=127 Identities=15% Similarity=0.123 Sum_probs=70.1
Q ss_pred CCeeEEEEeccCCCC--CchHHHHHHHHHHC---CCEEEeccCCCCCccCCCCCcchHhhHhhcCCCcchhcHHHHHHHH
Q 026476 38 SKLAVLLISDVYGYE--APNLRKLADKVAAA---GFYVAVPDFFHGDPYVADGGKPLQEWIKDHGVDKGFEEAKPVIQAL 112 (238)
Q Consensus 38 ~~~~vl~~hg~~g~~--~~~~~~~a~~l~~~---G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l 112 (238)
+.|.+|++||+.+.. ..++..+.+.+.++ ++.|+++|+ ...... ....... .....-+.+..++..|
T Consensus 70 ~~pt~iiiHGw~~~~~~~~~~~~~~~all~~~~~d~NVI~VDW-s~~a~~-----~Y~~a~~--n~~~vg~~la~~l~~L 141 (331)
T PF00151_consen 70 SKPTVIIIHGWTGSGSSESWIQDMIKALLQKDTGDYNVIVVDW-SRGASN-----NYPQAVA--NTRLVGRQLAKFLSFL 141 (331)
T ss_dssp TSEEEEEE--TT-TT-TTTHHHHHHHHHHCC--S-EEEEEEE--HHHHSS------HHHHHH--HHHHHHHHHHHHHHHH
T ss_pred CCCeEEEEcCcCCcccchhHHHHHHHHHHhhccCCceEEEEcc-hhhccc-----cccchhh--hHHHHHHHHHHHHHHH
Confidence 458999999998754 45777888876664 899999998 221110 0000000 0112223445555666
Q ss_pred Hh---cCCceEEEEEeeccHHHHHHccC--Cc--CceEEEEeccCCcCcc------ccccc-CCcEEEEecCCC
Q 026476 113 KS---KGITAIGAAGFCWGAKVVVQLGK--RE--FIQAAVLLHPSFVTVD------DIKGV-EVPLSILGAEID 172 (238)
Q Consensus 113 ~~---~~~~~i~l~G~S~GG~~a~~~a~--~~--~i~a~i~~~~~~~~~~------~~~~~-~~P~L~i~g~~D 172 (238)
.. .+.++|.++|||+||.+|..+++ .. +|..+..+.|..+..+ .+.+- ..=|-+||...+
T Consensus 142 ~~~~g~~~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDPAgP~F~~~~~~~rL~~~DA~fVdvIHT~~~ 215 (331)
T PF00151_consen 142 INNFGVPPENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDPAGPLFENNPPSERLDKSDAKFVDVIHTNAG 215 (331)
T ss_dssp HHHH---GGGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-B-TTTTTS-TTTS--GGGSSEEEEE-SSES
T ss_pred HhhcCCChhHEEEEeeccchhhhhhhhhhccCcceeeEEEecCcccccccCCChhHhhhccCCceEEEEEcCCc
Confidence 53 26789999999999999999883 23 7888888887654321 11111 224667777554
No 160
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=98.13 E-value=3.2e-05 Score=62.90 Aligned_cols=100 Identities=11% Similarity=0.074 Sum_probs=67.6
Q ss_pred eeEEEe-cCC-CCCeeEEEEeccCCCCCch-H-----HHHHHHHHHCCCEEEeccCCCCCccCCCCCcchHhhHhhcCCC
Q 026476 28 LNAYVT-GSP-DSKLAVLLISDVYGYEAPN-L-----RKLADKVAAAGFYVAVPDFFHGDPYVADGGKPLQEWIKDHGVD 99 (238)
Q Consensus 28 ~~~~~~-~p~-~~~~~vl~~hg~~g~~~~~-~-----~~~a~~l~~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~ 99 (238)
+++... .|+ .+...||+.-|..+..+.. + ..+-+..-..|..|++++| ||-+.+.+. ....
T Consensus 124 IDt~~I~~~~a~~~RWiL~s~GNg~~~E~~~~~~~~~~~~~~~ak~~~aNvl~fNY-pGVg~S~G~----------~s~~ 192 (365)
T PF05677_consen 124 IDTMAIHQPEAKPQRWILVSNGNGECYENRAMLDYKDDWIQRFAKELGANVLVFNY-PGVGSSTGP----------PSRK 192 (365)
T ss_pred EEEEEeeCCCCCCCcEEEEEcCChHHhhhhhhhccccHHHHHHHHHcCCcEEEECC-CccccCCCC----------CCHH
Confidence 444433 344 3456788887755432221 1 2233333345999999999 998877653 1235
Q ss_pred cchhcHHHHHHHHHhc----CCceEEEEEeeccHHHHHHccCC
Q 026476 100 KGFEEAKPVIQALKSK----GITAIGAAGFCWGAKVVVQLGKR 138 (238)
Q Consensus 100 ~~~~d~~~~~~~l~~~----~~~~i~l~G~S~GG~~a~~~a~~ 138 (238)
..+.|..+.+++++++ .+++|.+.|||+||.++..+..+
T Consensus 193 dLv~~~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~~ 235 (365)
T PF05677_consen 193 DLVKDYQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAEALKK 235 (365)
T ss_pred HHHHHHHHHHHHHHhcccCCChheEEEeeccccHHHHHHHHHh
Confidence 5788999999999864 35799999999999998886544
No 161
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=98.10 E-value=1.9e-05 Score=68.68 Aligned_cols=178 Identities=16% Similarity=0.189 Sum_probs=110.0
Q ss_pred eeEEEecCC-----CCCeeEEEEeccCCCC-CchHHHHHHHHHHCCCEEEeccCCCCCccCCCCCcchHhhHhhcCCCcc
Q 026476 28 LNAYVTGSP-----DSKLAVLLISDVYGYE-APNLRKLADKVAAAGFYVAVPDFFHGDPYVADGGKPLQEWIKDHGVDKG 101 (238)
Q Consensus 28 ~~~~~~~p~-----~~~~~vl~~hg~~g~~-~~~~~~~a~~l~~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~ 101 (238)
+|.++...+ ++.|.+|..+|++|-. .+.++.--..|...|+.....|. ||.|.-...+...+..... ...
T Consensus 454 VPM~Iv~kk~~k~dg~~P~LLygYGay~isl~p~f~~srl~lld~G~Vla~a~V-RGGGe~G~~WHk~G~lakK---qN~ 529 (712)
T KOG2237|consen 454 VPMFIVYKKDIKLDGSKPLLLYGYGAYGISLDPSFRASRLSLLDRGWVLAYANV-RGGGEYGEQWHKDGRLAKK---QNS 529 (712)
T ss_pred cceEEEEechhhhcCCCceEEEEecccceeeccccccceeEEEecceEEEEEee-ccCcccccchhhccchhhh---ccc
Confidence 555554422 3568999999988832 12333333345568998888888 7765332211111111111 346
Q ss_pred hhcHHHHHHHHHhcC---CceEEEEEeeccHHHHHHcc-CCc-CceEEEEeccCCc---------------------Ccc
Q 026476 102 FEEAKPVIQALKSKG---ITAIGAAGFCWGAKVVVQLG-KRE-FIQAAVLLHPSFV---------------------TVD 155 (238)
Q Consensus 102 ~~d~~~~~~~l~~~~---~~~i~l~G~S~GG~~a~~~a-~~~-~i~a~i~~~~~~~---------------------~~~ 155 (238)
..|..+..++|-+.+ +.+.++.|.|.||.++.... .+| .++|+|+-.|... .++
T Consensus 530 f~Dfia~AeyLve~gyt~~~kL~i~G~SaGGlLvga~iN~rPdLF~avia~VpfmDvL~t~~~tilplt~sd~ee~g~p~ 609 (712)
T KOG2237|consen 530 FDDFIACAEYLVENGYTQPSKLAIEGGSAGGLLVGACINQRPDLFGAVIAKVPFMDVLNTHKDTILPLTTSDYEEWGNPE 609 (712)
T ss_pred HHHHHHHHHHHHHcCCCCccceeEecccCccchhHHHhccCchHhhhhhhcCcceehhhhhccCccccchhhhcccCChh
Confidence 789999999998884 67999999999999999865 666 4555554322111 010
Q ss_pred c------------cccc-----CCcEEEEecCCCCCCCHHhHHHHHHHHhhc----CC--CCceEEEcCCCCeeeee
Q 026476 156 D------------IKGV-----EVPLSILGAEIDRLSPPALVKEFEEALNAK----SG--VDSFVKIFPKVAHGWTV 209 (238)
Q Consensus 156 ~------------~~~~-----~~P~L~i~g~~D~~~p~~~~~~~~~~~~~~----~~--~~~~~~~~~g~~H~~~~ 209 (238)
+ ..++ =..+|+..+.+|+-|++....++.+.++.. .. .++-+++..++||+.-.
T Consensus 610 ~~~~~~~i~~y~pv~~i~~q~~YPS~lvtta~hD~RV~~~~~~K~vAklre~~~~~~~q~~pvll~i~~~agH~~~~ 686 (712)
T KOG2237|consen 610 DFEDLIKISPYSPVDNIKKQVQYPSMLVTTADHDDRVGPLESLKWVAKLREATCDSLKQTNPVLLRIETKAGHGAEK 686 (712)
T ss_pred hhhhhheecccCccCCCchhccCcceEEeeccCCCcccccchHHHHHHHHHHhhcchhcCCCEEEEEecCCccccCC
Confidence 0 1111 236889999998766665555555555321 11 36778899999999754
No 162
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=97.97 E-value=7.3e-05 Score=72.87 Aligned_cols=96 Identities=10% Similarity=0.070 Sum_probs=61.9
Q ss_pred CCeeEEEEeccCCCCCchHHHHHHHHHHCCCEEEeccCCCCCccCCCCCcchHhhHhhcCCCcchhcHHHHHHHHHhcCC
Q 026476 38 SKLAVLLISDVYGYEAPNLRKLADKVAAAGFYVAVPDFFHGDPYVADGGKPLQEWIKDHGVDKGFEEAKPVIQALKSKGI 117 (238)
Q Consensus 38 ~~~~vl~~hg~~g~~~~~~~~~a~~l~~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~ 117 (238)
..++++++|++.|.. ..|..+++.|.. ++.|+.++. +|++..... ....+...+++.+.++.+ ...
T Consensus 1067 ~~~~l~~lh~~~g~~-~~~~~l~~~l~~-~~~v~~~~~-~g~~~~~~~---------~~~l~~la~~~~~~i~~~--~~~ 1132 (1296)
T PRK10252 1067 DGPTLFCFHPASGFA-WQFSVLSRYLDP-QWSIYGIQS-PRPDGPMQT---------ATSLDEVCEAHLATLLEQ--QPH 1132 (1296)
T ss_pred CCCCeEEecCCCCch-HHHHHHHHhcCC-CCcEEEEEC-CCCCCCCCC---------CCCHHHHHHHHHHHHHhh--CCC
Confidence 347899999988874 567888888854 599999998 776533211 112222333333333322 134
Q ss_pred ceEEEEEeeccHHHHHHccC----C-cCceEEEEe
Q 026476 118 TAIGAAGFCWGAKVVVQLGK----R-EFIQAAVLL 147 (238)
Q Consensus 118 ~~i~l~G~S~GG~~a~~~a~----~-~~i~a~i~~ 147 (238)
.++.++|||+||.++..+|. . ..+...+++
T Consensus 1133 ~p~~l~G~S~Gg~vA~e~A~~l~~~~~~v~~l~l~ 1167 (1296)
T PRK10252 1133 GPYHLLGYSLGGTLAQGIAARLRARGEEVAFLGLL 1167 (1296)
T ss_pred CCEEEEEechhhHHHHHHHHHHHHcCCceeEEEEe
Confidence 58999999999999999874 2 245555544
No 163
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=97.97 E-value=5.1e-05 Score=59.76 Aligned_cols=131 Identities=15% Similarity=0.169 Sum_probs=81.1
Q ss_pred CCeeEEEEeccCCCCCchHHHHHHHHHHCCC--EEEeccCCCCCccCCCCCcchHhhHhhcCCCcchhcHHHHHHHHHhc
Q 026476 38 SKLAVLLISDVYGYEAPNLRKLADKVAAAGF--YVAVPDFFHGDPYVADGGKPLQEWIKDHGVDKGFEEAKPVIQALKSK 115 (238)
Q Consensus 38 ~~~~vl~~hg~~g~~~~~~~~~a~~l~~~G~--~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~ 115 (238)
.+..+|++||+.-.-.......++.....++ .++.+.+ +..+..... +..+........++..+++.+.+.
T Consensus 17 ~~~vlvfVHGyn~~f~~a~~r~aql~~~~~~~~~~i~FsW-PS~g~~~~Y------~~d~~~a~~s~~~l~~~L~~L~~~ 89 (233)
T PF05990_consen 17 DKEVLVFVHGYNNSFEDALRRAAQLAHDLGFPGVVILFSW-PSDGSLLGY------FYDRESARFSGPALARFLRDLARA 89 (233)
T ss_pred CCeEEEEEeCCCCCHHHHHHHHHHHHHHhCCCceEEEEEc-CCCCChhhh------hhhhhhHHHHHHHHHHHHHHHHhc
Confidence 4568899998654433445566665555555 5788887 443322111 111111223345566677777666
Q ss_pred -CCceEEEEEeeccHHHHHHccC-----C------cCceEEEEeccCCcCc------ccccccCCcEEEEecCCCCCC
Q 026476 116 -GITAIGAAGFCWGAKVVVQLGK-----R------EFIQAAVLLHPSFVTV------DDIKGVEVPLSILGAEIDRLS 175 (238)
Q Consensus 116 -~~~~i~l~G~S~GG~~a~~~a~-----~------~~i~a~i~~~~~~~~~------~~~~~~~~P~L~i~g~~D~~~ 175 (238)
+..+|.+++||||+.+.+.... . ..+..++++.|..... ..+.+...++.+.+..+|...
T Consensus 90 ~~~~~I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDid~d~f~~~~~~~~~~~~~itvy~s~~D~AL 167 (233)
T PF05990_consen 90 PGIKRIHILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDIDNDVFRSQLPDLGSSARRITVYYSRNDRAL 167 (233)
T ss_pred cCCceEEEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCCCHHHHHHHHHHHhhcCCCEEEEEcCCchHH
Confidence 6789999999999999998542 1 1466777777654431 123445678999999999754
No 164
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=97.90 E-value=0.0011 Score=52.51 Aligned_cols=106 Identities=14% Similarity=0.152 Sum_probs=62.1
Q ss_pred CCceEEEEEeeccHHHHHHcc-CC-cCceEEEEeccCCcCc--------cccccc-CCcEEEEecCC--C---CCCCH--
Q 026476 116 GITAIGAAGFCWGAKVVVQLG-KR-EFIQAAVLLHPSFVTV--------DDIKGV-EVPLSILGAEI--D---RLSPP-- 177 (238)
Q Consensus 116 ~~~~i~l~G~S~GG~~a~~~a-~~-~~i~a~i~~~~~~~~~--------~~~~~~-~~P~L~i~g~~--D---~~~p~-- 177 (238)
+.++.+++|||+||.+++... .+ ..+...++++|...-. +..... ..++.+.-|.. | .....
T Consensus 135 ~~~~~~i~GhSlGGLfvl~aLL~~p~~F~~y~~~SPSlWw~n~~~l~~~~~~~~~~~~~i~l~iG~~e~~~~~~~~~~~~ 214 (264)
T COG2819 135 NSERTAIIGHSLGGLFVLFALLTYPDCFGRYGLISPSLWWHNEAILREIESLKLLKTKRICLYIGSGELDSSRSIRMAEN 214 (264)
T ss_pred CcccceeeeecchhHHHHHHHhcCcchhceeeeecchhhhCCHHHhccccccccCCCcceEEEecccccCcchhhhhhhH
Confidence 467899999999999999955 55 4677888877753211 111111 33455554444 2 22222
Q ss_pred -HhHHHHHHHHhhcCCCCceEEEcCCCCeeeeecCCCCCHHHHHHHHHHHHHHHHHHH
Q 026476 178 -ALVKEFEEALNAKSGVDSFVKIFPKVAHGWTVRYNVEDETAVKAAEEAHHNLLEWFA 234 (238)
Q Consensus 178 -~~~~~~~~~~~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~ 234 (238)
..+.+..+.+....+....+..+++.+|+-.. ...+..++.|+.
T Consensus 215 ~~~~~~~~~~~~~~~g~~~~f~~~~~~~H~~~~-------------~~~~~~al~~l~ 259 (264)
T COG2819 215 KQEAAELSSLLEKRTGARLVFQEEPLEHHGSVI-------------HASLPSALRFLD 259 (264)
T ss_pred HHHHHHHHHHHhhccCCceEecccccccccchH-------------HHHHHHHHHhhh
Confidence 23333344442226777778888887887532 345566666664
No 165
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.88 E-value=4.9e-05 Score=60.39 Aligned_cols=96 Identities=14% Similarity=0.035 Sum_probs=65.6
Q ss_pred eeEEEEeccCCCCCchHHHHHHHHHHCCCEEEeccCCCCCccCCCCCcchHhhHhhcCCCcchhcHHHHHHHHHhc-CCc
Q 026476 40 LAVLLISDVYGYEAPNLRKLADKVAAAGFYVAVPDFFHGDPYVADGGKPLQEWIKDHGVDKGFEEAKPVIQALKSK-GIT 118 (238)
Q Consensus 40 ~~vl~~hg~~g~~~~~~~~~a~~l~~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~-~~~ 118 (238)
|++.++|+..|.- ..+..++..|... ..|+..+. +|.+.... .....-+.+...++.+++. +..
T Consensus 1 ~pLF~fhp~~G~~-~~~~~L~~~l~~~-~~v~~l~a-~g~~~~~~------------~~~~l~~~a~~yv~~Ir~~QP~G 65 (257)
T COG3319 1 PPLFCFHPAGGSV-LAYAPLAAALGPL-LPVYGLQA-PGYGAGEQ------------PFASLDDMAAAYVAAIRRVQPEG 65 (257)
T ss_pred CCEEEEcCCCCcH-HHHHHHHHHhccC-ceeecccc-Cccccccc------------ccCCHHHHHHHHHHHHHHhCCCC
Confidence 5788999998874 5678999999888 88888887 66643211 1111223344455556554 677
Q ss_pred eEEEEEeeccHHHHHHccCC-----cCceEEEEeccC
Q 026476 119 AIGAAGFCWGAKVVVQLGKR-----EFIQAAVLLHPS 150 (238)
Q Consensus 119 ~i~l~G~S~GG~~a~~~a~~-----~~i~a~i~~~~~ 150 (238)
+..++|+|+||.+|..+|.. ..+...+++...
T Consensus 66 Py~L~G~S~GG~vA~evA~qL~~~G~~Va~L~llD~~ 102 (257)
T COG3319 66 PYVLLGWSLGGAVAFEVAAQLEAQGEEVAFLGLLDAV 102 (257)
T ss_pred CEEEEeeccccHHHHHHHHHHHhCCCeEEEEEEeccC
Confidence 99999999999999998842 245555555433
No 166
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=97.84 E-value=2.2e-05 Score=63.62 Aligned_cols=124 Identities=16% Similarity=0.084 Sum_probs=80.6
Q ss_pred eeEEEEeccCCCCCchHHHHHHHHHHCCCEEEeccCCCCCccCCCCCcchHhhHhhcCCCcchhcHHHHHHHHHhc---C
Q 026476 40 LAVLLISDVYGYEAPNLRKLADKVAAAGFYVAVPDFFHGDPYVADGGKPLQEWIKDHGVDKGFEEAKPVIQALKSK---G 116 (238)
Q Consensus 40 ~~vl~~hg~~g~~~~~~~~~a~~l~~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~---~ 116 (238)
..||++-|..|..+ -.....=++.||.|+-.++ +|.+.+.+-. -+.+....+.+++++.-+. .
T Consensus 244 ~LvIC~EGNAGFYE---vG~m~tP~~lgYsvLGwNh-PGFagSTG~P----------~p~n~~nA~DaVvQfAI~~Lgf~ 309 (517)
T KOG1553|consen 244 DLVICFEGNAGFYE---VGVMNTPAQLGYSVLGWNH-PGFAGSTGLP----------YPVNTLNAADAVVQFAIQVLGFR 309 (517)
T ss_pred eEEEEecCCccceE---eeeecChHHhCceeeccCC-CCccccCCCC----------CcccchHHHHHHHHHHHHHcCCC
Confidence 45666666556432 1333445678999999999 8886654321 1111222334444444332 4
Q ss_pred CceEEEEEeeccHHHHHHcc-CCcCceEEEEeccCCc-----------------------------CcccccccCCcEEE
Q 026476 117 ITAIGAAGFCWGAKVVVQLG-KREFIQAAVLLHPSFV-----------------------------TVDDIKGVEVPLSI 166 (238)
Q Consensus 117 ~~~i~l~G~S~GG~~a~~~a-~~~~i~a~i~~~~~~~-----------------------------~~~~~~~~~~P~L~ 166 (238)
.+.|.+.|+|.||..+.++| ..|.++++|+-.. +. ..+.+.+.+.|+++
T Consensus 310 ~edIilygWSIGGF~~~waAs~YPdVkavvLDAt-FDDllpLAl~rMP~~~~giV~~aiRnh~NLnnaell~ry~GPi~l 388 (517)
T KOG1553|consen 310 QEDIILYGWSIGGFPVAWAASNYPDVKAVVLDAT-FDDLLPLALFRMPTFFSGIVEHAIRNHMNLNNAELLARYKGPIRL 388 (517)
T ss_pred ccceEEEEeecCCchHHHHhhcCCCceEEEeecc-hhhhhhHHhhhchHHHHHHHHHHHHHhcccchHHHHHhhcCchhH
Confidence 67899999999999999988 6789999986421 11 01235667889999
Q ss_pred EecCCCCCCCHH
Q 026476 167 LGAEIDRLSPPA 178 (238)
Q Consensus 167 i~g~~D~~~p~~ 178 (238)
|--++|+++...
T Consensus 389 IRRt~dEIitt~ 400 (517)
T KOG1553|consen 389 IRRTQDEIITTA 400 (517)
T ss_pred hhhhhHhhhhcc
Confidence 999999887544
No 167
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=97.78 E-value=0.0015 Score=50.12 Aligned_cols=94 Identities=15% Similarity=0.189 Sum_probs=62.1
Q ss_pred eEEEEeccCCC---CCchHHHHHHHHHHCCCEEEeccCCCCC--ccCCCCCcchHhhHhhcCCCcchhcHHHHHHHHHhc
Q 026476 41 AVLLISDVYGY---EAPNLRKLADKVAAAGFYVAVPDFFHGD--PYVADGGKPLQEWIKDHGVDKGFEEAKPVIQALKSK 115 (238)
Q Consensus 41 ~vl~~hg~~g~---~~~~~~~~a~~l~~~G~~v~~~d~~~g~--~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~ 115 (238)
..|++-|+.|. .......++..|-+.+|..+.+-. +.. |+. .....+..+|+..+++.+...
T Consensus 37 ~~vvfiGGLgdgLl~~~y~~~L~~~lde~~wslVq~q~-~Ssy~G~G------------t~slk~D~edl~~l~~Hi~~~ 103 (299)
T KOG4840|consen 37 VKVVFIGGLGDGLLICLYTTMLNRYLDENSWSLVQPQL-RSSYNGYG------------TFSLKDDVEDLKCLLEHIQLC 103 (299)
T ss_pred EEEEEEcccCCCccccccHHHHHHHHhhccceeeeeec-cccccccc------------cccccccHHHHHHHHHHhhcc
Confidence 44555555542 124557899999999999999887 332 121 223345678888888877554
Q ss_pred C-CceEEEEEeeccHHHHHHccCC----cCceEEEEe
Q 026476 116 G-ITAIGAAGFCWGAKVVVQLGKR----EFIQAAVLL 147 (238)
Q Consensus 116 ~-~~~i~l~G~S~GG~~a~~~a~~----~~i~a~i~~ 147 (238)
+ ...|.++|||-|..=.+.+..+ ..++++|+.
T Consensus 104 ~fSt~vVL~GhSTGcQdi~yYlTnt~~~r~iraaIlq 140 (299)
T KOG4840|consen 104 GFSTDVVLVGHSTGCQDIMYYLTNTTKDRKIRAAILQ 140 (299)
T ss_pred CcccceEEEecCccchHHHHHHHhccchHHHHHHHHh
Confidence 3 4599999999999887775421 245555554
No 168
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=97.77 E-value=0.0028 Score=53.21 Aligned_cols=37 Identities=22% Similarity=0.244 Sum_probs=32.7
Q ss_pred cEEEEecCCCCCCCHHhHHHHHHHHhhcCCCCceEEEc
Q 026476 163 PLSILGAEIDRLSPPALVKEFEEALNAKSGVDSFVKIF 200 (238)
Q Consensus 163 P~L~i~g~~D~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 200 (238)
=....|+..|+..|.+.-.++++.+ .+.|-+++++.+
T Consensus 295 ~yvsYHs~~D~~~p~~~K~~l~~~l-~~lgfda~l~lI 331 (403)
T PF11144_consen 295 IYVSYHSIKDDLAPAEDKEELYEIL-KNLGFDATLHLI 331 (403)
T ss_pred EEEEEeccCCCCCCHHHHHHHHHHH-HHcCCCeEEEEe
Confidence 4557899999999999999999999 678889899887
No 169
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.63 E-value=0.00039 Score=57.06 Aligned_cols=106 Identities=10% Similarity=0.080 Sum_probs=65.1
Q ss_pred CeeEEEEeccCCCCCchHHHHHHHHHHCCCE--EEeccCCCCCccCCCCCcchHhhHhhcCCCcchhcHHHHHHHHHhc-
Q 026476 39 KLAVLLISDVYGYEAPNLRKLADKVAAAGFY--VAVPDFFHGDPYVADGGKPLQEWIKDHGVDKGFEEAKPVIQALKSK- 115 (238)
Q Consensus 39 ~~~vl~~hg~~g~~~~~~~~~a~~l~~~G~~--v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~- 115 (238)
+..+||+||....-.....++++.....|+. .+++.++ ..+.-.+. ..++........++..++.+|.+.
T Consensus 116 k~vlvFvHGfNntf~dav~R~aqI~~d~g~~~~pVvFSWP-S~g~l~~Y------n~DreS~~~Sr~aLe~~lr~La~~~ 188 (377)
T COG4782 116 KTVLVFVHGFNNTFEDAVYRTAQIVHDSGNDGVPVVFSWP-SRGSLLGY------NYDRESTNYSRPALERLLRYLATDK 188 (377)
T ss_pred CeEEEEEcccCCchhHHHHHHHHHHhhcCCCcceEEEEcC-CCCeeeec------ccchhhhhhhHHHHHHHHHHHHhCC
Confidence 3567788876543345566788888877754 4455552 11111110 011222233446678888888776
Q ss_pred CCceEEEEEeeccHHHHHHccC-----C-----cCceEEEEeccCC
Q 026476 116 GITAIGAAGFCWGAKVVVQLGK-----R-----EFIQAAVLLHPSF 151 (238)
Q Consensus 116 ~~~~i~l~G~S~GG~~a~~~a~-----~-----~~i~a~i~~~~~~ 151 (238)
...+|.+++||||.++++...+ . .+|+-+|+..+..
T Consensus 189 ~~~~I~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPDi 234 (377)
T COG4782 189 PVKRIYLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPDI 234 (377)
T ss_pred CCceEEEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCCC
Confidence 4789999999999999997542 1 2577777776653
No 170
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=97.57 E-value=0.00019 Score=55.90 Aligned_cols=27 Identities=15% Similarity=0.397 Sum_probs=21.5
Q ss_pred CCeeEEEEeccCCCCCchHHHHHHHHHH
Q 026476 38 SKLAVLLISDVYGYEAPNLRKLADKVAA 65 (238)
Q Consensus 38 ~~~~vl~~hg~~g~~~~~~~~~a~~l~~ 65 (238)
+...||++||..|+. ..+..+.+.+..
T Consensus 3 ~~hLvV~vHGL~G~~-~d~~~~~~~l~~ 29 (217)
T PF05057_consen 3 PVHLVVFVHGLWGNP-ADMRYLKNHLEK 29 (217)
T ss_pred CCEEEEEeCCCCCCH-HHHHHHHHHHHH
Confidence 346799999999985 677888888777
No 171
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=97.40 E-value=0.00065 Score=46.37 Aligned_cols=61 Identities=15% Similarity=0.188 Sum_probs=47.1
Q ss_pred cCCcEEEEecCCCCCCCHHhHHHHHHHHhhcCCCCceEEEcCCCCeeeeecCCCCCHHHHHHHHHHHHHHHHHHHH
Q 026476 160 VEVPLSILGAEIDRLSPPALVKEFEEALNAKSGVDSFVKIFPKVAHGWTVRYNVEDETAVKAAEEAHHNLLEWFAK 235 (238)
Q Consensus 160 ~~~P~L~i~g~~D~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~ 235 (238)
...|+|++.++.|+.+|.+.++++.+.+. +..++..+|.+|+...... .-+.+.+.+||.+
T Consensus 33 ~~~piL~l~~~~Dp~TP~~~a~~~~~~l~-----~s~lvt~~g~gHg~~~~~s----------~C~~~~v~~yl~~ 93 (103)
T PF08386_consen 33 GAPPILVLGGTHDPVTPYEGARAMAARLP-----GSRLVTVDGAGHGVYAGGS----------PCVDKAVDDYLLD 93 (103)
T ss_pred CCCCEEEEecCcCCCCcHHHHHHHHHHCC-----CceEEEEeccCcceecCCC----------hHHHHHHHHHHHc
Confidence 35899999999999999999999999882 2468888999999874221 2355667777763
No 172
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=97.38 E-value=0.00052 Score=57.13 Aligned_cols=96 Identities=16% Similarity=0.131 Sum_probs=61.4
Q ss_pred CeeEEEEeccCCCCCchHHHHHHHHHHCCCE---EEeccCCCCCccCCCCCcchHhhHhhcCCCcchhcHHHHHHHH-Hh
Q 026476 39 KLAVLLISDVYGYEAPNLRKLADKVAAAGFY---VAVPDFFHGDPYVADGGKPLQEWIKDHGVDKGFEEAKPVIQAL-KS 114 (238)
Q Consensus 39 ~~~vl~~hg~~g~~~~~~~~~a~~l~~~G~~---v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l-~~ 114 (238)
.-+++++||..+. ...+..+...++..|+. +..++. .+...... .....+.+.+.++.+ +.
T Consensus 59 ~~pivlVhG~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~-------------~~~~~~ql~~~V~~~l~~ 123 (336)
T COG1075 59 KEPIVLVHGLGGG-YGNFLPLDYRLAILGWLTNGVYAFEL-SGGDGTYS-------------LAVRGEQLFAYVDEVLAK 123 (336)
T ss_pred CceEEEEccCcCC-cchhhhhhhhhcchHHHhcccccccc-cccCCCcc-------------ccccHHHHHHHHHHHHhh
Confidence 3489999998444 46778888888888888 888887 43311111 011112223333222 22
Q ss_pred cCCceEEEEEeeccHHHHHHccCC-c---CceEEEEecc
Q 026476 115 KGITAIGAAGFCWGAKVVVQLGKR-E---FIQAAVLLHP 149 (238)
Q Consensus 115 ~~~~~i~l~G~S~GG~~a~~~a~~-~---~i~a~i~~~~ 149 (238)
.+..++.++||||||.++..++.. + .++.++.+.+
T Consensus 124 ~ga~~v~LigHS~GG~~~ry~~~~~~~~~~V~~~~tl~t 162 (336)
T COG1075 124 TGAKKVNLIGHSMGGLDSRYYLGVLGGANRVASVVTLGT 162 (336)
T ss_pred cCCCceEEEeecccchhhHHHHhhcCccceEEEEEEecc
Confidence 367899999999999999987742 2 5777777654
No 173
>KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism]
Probab=97.36 E-value=0.0039 Score=54.33 Aligned_cols=47 Identities=17% Similarity=0.298 Sum_probs=40.0
Q ss_pred CcEEEEecCCCCCCCHHhHHHHHHHHhhcCCCCceEEEcCCCCeeeeecC
Q 026476 162 VPLSILGAEIDRLSPPALVKEFEEALNAKSGVDSFVKIFPKVAHGWTVRY 211 (238)
Q Consensus 162 ~P~L~i~g~~D~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~H~~~~~~ 211 (238)
.|+.|+.-..|+.. +++-+++.++ ++.|.++.+.+.++.-|||.+..
T Consensus 788 Pp~~i~ac~mDP~L--DD~vmfA~kL-r~lG~~v~l~vle~lPHGFLnft 834 (880)
T KOG4388|consen 788 PPVHIVACAMDPML--DDSVMFARKL-RNLGQPVTLRVLEDLPHGFLNFT 834 (880)
T ss_pred CCceEEEeccCcch--hHHHHHHHHH-HhcCCceeehhhhcCCccceeHH
Confidence 48889999899964 6778899999 67888999999999999998754
No 174
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=97.32 E-value=0.0061 Score=48.96 Aligned_cols=188 Identities=15% Similarity=0.174 Sum_probs=102.4
Q ss_pred eeCCeeEEEecCC-CCCeeEEEEeccCCCCCchHH-----HHHHHHHHCCCEEEeccCCCCCccCCCCCcchHhhHhhcC
Q 026476 24 KLGGLNAYVTGSP-DSKLAVLLISDVYGYEAPNLR-----KLADKVAAAGFYVAVPDFFHGDPYVADGGKPLQEWIKDHG 97 (238)
Q Consensus 24 ~~~~~~~~~~~p~-~~~~~vl~~hg~~g~~~~~~~-----~~a~~l~~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~ 97 (238)
..|.+..++.... +++|++|=+|+.+-++..-+. .-++.+.+ .+.++=+|. +|+...... ...-..-.+
T Consensus 7 ~~G~v~V~v~G~~~~~kp~ilT~HDvGlNh~scF~~ff~~~~m~~i~~-~f~i~Hi~a-PGqe~ga~~---~p~~y~yPs 81 (283)
T PF03096_consen 7 PYGSVHVTVQGDPKGNKPAILTYHDVGLNHKSCFQGFFNFEDMQEILQ-NFCIYHIDA-PGQEEGAAT---LPEGYQYPS 81 (283)
T ss_dssp TTEEEEEEEESS--TTS-EEEEE--TT--HHHHCHHHHCSHHHHHHHT-TSEEEEEE--TTTSTT--------TT-----
T ss_pred CceEEEEEEEecCCCCCceEEEeccccccchHHHHHHhcchhHHHHhh-ceEEEEEeC-CCCCCCccc---ccccccccC
Confidence 3455777777543 457888889986533211111 22333444 599999999 887533221 000001112
Q ss_pred CCcchhcHHHHHHHHHhcCCceEEEEEeeccHHHHHHcc-CCc-CceEEEEeccCCcC----------------------
Q 026476 98 VDKGFEEAKPVIQALKSKGITAIGAAGFCWGAKVVVQLG-KRE-FIQAAVLLHPSFVT---------------------- 153 (238)
Q Consensus 98 ~~~~~~d~~~~~~~l~~~~~~~i~l~G~S~GG~~a~~~a-~~~-~i~a~i~~~~~~~~---------------------- 153 (238)
.++..+++..+++++ +.+.+.-+|--.|+.+-.++| .+| ++.+.|++++....
T Consensus 82 md~LAe~l~~Vl~~f---~lk~vIg~GvGAGAnIL~rfAl~~p~~V~GLiLvn~~~~~~gw~Ew~~~K~~~~~L~~~gmt 158 (283)
T PF03096_consen 82 MDQLAEMLPEVLDHF---GLKSVIGFGVGAGANILARFALKHPERVLGLILVNPTCTAAGWMEWFYQKLSSWLLYSYGMT 158 (283)
T ss_dssp HHHHHCTHHHHHHHH---T---EEEEEETHHHHHHHHHHHHSGGGEEEEEEES---S---HHHHHHHHHH-------CTT
T ss_pred HHHHHHHHHHHHHhC---CccEEEEEeeccchhhhhhccccCccceeEEEEEecCCCCccHHHHHHHHHhcccccccccc
Confidence 256677788888777 567888899999999998887 444 78899888643210
Q ss_pred -----------------------------------------------------cccccccCCcEEEEecCCCCCCCHHhH
Q 026476 154 -----------------------------------------------------VDDIKGVEVPLSILGAEIDRLSPPALV 180 (238)
Q Consensus 154 -----------------------------------------------------~~~~~~~~~P~L~i~g~~D~~~p~~~~ 180 (238)
....+...||+|++.|++-+. .+.+
T Consensus 159 ~~~~d~Ll~h~Fg~~~~~~n~Dlv~~yr~~l~~~~Np~Nl~~f~~sy~~R~DL~~~~~~~~c~vLlvvG~~Sp~--~~~v 236 (283)
T PF03096_consen 159 SSVKDYLLWHYFGKEEEENNSDLVQTYRQHLDERINPKNLALFLNSYNSRTDLSIERPSLGCPVLLVVGDNSPH--VDDV 236 (283)
T ss_dssp S-HHHHHHHHHS-HHHHHCT-HHHHHHHHHHHT-TTHHHHHHHHHHHHT-----SECTTCCS-EEEEEETTSTT--HHHH
T ss_pred cchHHhhhhcccccccccccHHHHHHHHHHHhcCCCHHHHHHHHHHHhccccchhhcCCCCCCeEEEEecCCcc--hhhH
Confidence 011345579999999987774 5677
Q ss_pred HHHHHHHhhcCCCCceEEEcCCCCeeeeecCCCCCHHHHHHHHHHHHHHHHHHH
Q 026476 181 KEFEEALNAKSGVDSFVKIFPKVAHGWTVRYNVEDETAVKAAEEAHHNLLEWFA 234 (238)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~ 234 (238)
..+...+. ..+.++...++++=.... +....+.+.+.=||+
T Consensus 237 v~~ns~Ld---p~~ttllkv~dcGglV~e----------EqP~klaea~~lFlQ 277 (283)
T PF03096_consen 237 VEMNSKLD---PTKTTLLKVADCGGLVLE----------EQPGKLAEAFKLFLQ 277 (283)
T ss_dssp HHHHHHS----CCCEEEEEETT-TT-HHH----------H-HHHHHHHHHHHHH
T ss_pred HHHHhhcC---cccceEEEecccCCcccc----------cCcHHHHHHHHHHHc
Confidence 78888773 226677777766433322 123445555555665
No 175
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=97.27 E-value=0.0016 Score=51.35 Aligned_cols=99 Identities=11% Similarity=0.059 Sum_probs=64.0
Q ss_pred eeEEEEeccCCCCC-chHHHHHHHHHHC-CCEEEeccCCCCCccCCCCCcchHhhHhhcCCCcchhcHHHHHHHHHhcCC
Q 026476 40 LAVLLISDVYGYEA-PNLRKLADKVAAA-GFYVAVPDFFHGDPYVADGGKPLQEWIKDHGVDKGFEEAKPVIQALKSKGI 117 (238)
Q Consensus 40 ~~vl~~hg~~g~~~-~~~~~~a~~l~~~-G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~ 117 (238)
.++|++||.+.... ..+..+.+.+.+. |..|.+.|.+.|...+ |.. ...++++.+.+.+...++. .
T Consensus 24 ~P~ii~HGigd~c~~~~~~~~~q~l~~~~g~~v~~leig~g~~~s---------~l~--pl~~Qv~~~ce~v~~m~~l-s 91 (296)
T KOG2541|consen 24 VPVIVWHGIGDSCSSLSMANLTQLLEELPGSPVYCLEIGDGIKDS---------SLM--PLWEQVDVACEKVKQMPEL-S 91 (296)
T ss_pred CCEEEEeccCcccccchHHHHHHHHHhCCCCeeEEEEecCCcchh---------hhc--cHHHHHHHHHHHHhcchhc-c
Confidence 67999999876432 3478888888887 9999999984442111 111 1122333333333322222 4
Q ss_pred ceEEEEEeeccHHHHHHccC---CcCceEEEEeccC
Q 026476 118 TAIGAAGFCWGAKVVVQLGK---REFIQAAVLLHPS 150 (238)
Q Consensus 118 ~~i~l~G~S~GG~~a~~~a~---~~~i~a~i~~~~~ 150 (238)
+-+.++|+|+||.++-.++. .|.++..|.+.++
T Consensus 92 qGynivg~SQGglv~Raliq~cd~ppV~n~ISL~gP 127 (296)
T KOG2541|consen 92 QGYNIVGYSQGGLVARALIQFCDNPPVKNFISLGGP 127 (296)
T ss_pred CceEEEEEccccHHHHHHHHhCCCCCcceeEeccCC
Confidence 56889999999999988772 5678888877553
No 176
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=97.26 E-value=0.0091 Score=46.88 Aligned_cols=160 Identities=16% Similarity=0.166 Sum_probs=88.8
Q ss_pred EEEecCCCCCeeEEEEeccC--CC-CCchHHHHHHHHHHCCCEEEeccCCCCCccCCCCCcchHhhHhhcCCCcchhcHH
Q 026476 30 AYVTGSPDSKLAVLLISDVY--GY-EAPNLRKLADKVAAAGFYVAVPDFFHGDPYVADGGKPLQEWIKDHGVDKGFEEAK 106 (238)
Q Consensus 30 ~~~~~p~~~~~~vl~~hg~~--g~-~~~~~~~~a~~l~~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 106 (238)
.|+..|.. ..+||-+-|+. |. ..-.|+.+.+.|+++||.|++.-+-.+.. .+.-. ....+...
T Consensus 8 ~wvl~P~~-P~gvihFiGGaf~ga~P~itYr~lLe~La~~Gy~ViAtPy~~tfD----------H~~~A---~~~~~~f~ 73 (250)
T PF07082_consen 8 SWVLIPPR-PKGVIHFIGGAFVGAAPQITYRYLLERLADRGYAVIATPYVVTFD----------HQAIA---REVWERFE 73 (250)
T ss_pred cEEEeCCC-CCEEEEEcCcceeccCcHHHHHHHHHHHHhCCcEEEEEecCCCCc----------HHHHH---HHHHHHHH
Confidence 46667764 34677666643 43 22356889999999999999988722211 01000 11233445
Q ss_pred HHHHHHHhcC-----CceEEEEEeeccHHHHHHccCCc--CceEEEEec--cC--------------C------cCccc-
Q 026476 107 PVIQALKSKG-----ITAIGAAGFCWGAKVVVQLGKRE--FIQAAVLLH--PS--------------F------VTVDD- 156 (238)
Q Consensus 107 ~~~~~l~~~~-----~~~i~l~G~S~GG~~a~~~a~~~--~i~a~i~~~--~~--------------~------~~~~~- 156 (238)
.+++.+.... .-++.-+|||+|.-+-+++.... ..++-|+++ .. . +++++
T Consensus 74 ~~~~~L~~~~~~~~~~lP~~~vGHSlGcklhlLi~s~~~~~r~gniliSFNN~~a~~aIP~~~~l~~~l~~EF~PsP~ET 153 (250)
T PF07082_consen 74 RCLRALQKRGGLDPAYLPVYGVGHSLGCKLHLLIGSLFDVERAGNILISFNNFPADEAIPLLEQLAPALRLEFTPSPEET 153 (250)
T ss_pred HHHHHHHHhcCCCcccCCeeeeecccchHHHHHHhhhccCcccceEEEecCChHHHhhCchHhhhccccccCccCCHHHH
Confidence 5555555541 24788899999999999877321 222323331 10 0 00111
Q ss_pred ------ccccCCcEEEEecCCCCCCCHHhHHHHHHHHhhcCCCCceEEEcCCCCeeee
Q 026476 157 ------IKGVEVPLSILGAEIDRLSPPALVKEFEEALNAKSGVDSFVKIFPKVAHGWT 208 (238)
Q Consensus 157 ------~~~~~~P~L~i~g~~D~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~H~~~ 208 (238)
--.+.. .|+|.=.+|.+ ++...+.+.++.+.....+....+| .|..-
T Consensus 154 ~~li~~~Y~~~r-nLLIkF~~D~i---Dqt~~L~~~L~~r~~~~~~~~~L~G-~HLTP 206 (250)
T PF07082_consen 154 RRLIRESYQVRR-NLLIKFNDDDI---DQTDELEQILQQRFPDMVSIQTLPG-NHLTP 206 (250)
T ss_pred HHHHHHhcCCcc-ceEEEecCCCc---cchHHHHHHHhhhccccceEEeCCC-CCCCc
Confidence 011233 34444446654 4666677777544444567788885 88763
No 177
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=97.09 E-value=0.0016 Score=58.48 Aligned_cols=87 Identities=18% Similarity=0.154 Sum_probs=51.9
Q ss_pred CeeEEEEeccCCCCCchHHHHHHHHHH----------------CCCEEEeccCCCCCccCCCCCcchHhhHhhcCCCcch
Q 026476 39 KLAVLLISDVYGYEAPNLRKLADKVAA----------------AGFYVAVPDFFHGDPYVADGGKPLQEWIKDHGVDKGF 102 (238)
Q Consensus 39 ~~~vl~~hg~~g~~~~~~~~~a~~l~~----------------~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 102 (238)
+-+|+++.|..|+. ...+.+|..... ..|.-+++|+ .+ ++ ..+......++.
T Consensus 89 GIPVLFIPGNAGSy-KQvRSiAS~a~n~y~~~~~e~t~~~d~~~~~DFFaVDF-nE---------e~-tAm~G~~l~dQt 156 (973)
T KOG3724|consen 89 GIPVLFIPGNAGSY-KQVRSIASVAQNAYQGGPFEKTEDRDNPFSFDFFAVDF-NE---------EF-TAMHGHILLDQT 156 (973)
T ss_pred CceEEEecCCCCch-HHHHHHHHHHhhhhcCCchhhhhcccCccccceEEEcc-cc---------hh-hhhccHhHHHHH
Confidence 35799999998874 566777665542 1233444444 11 11 111222223344
Q ss_pred hcHHHHHHHHHhc-------C---CceEEEEEeeccHHHHHHccC
Q 026476 103 EEAKPVIQALKSK-------G---ITAIGAAGFCWGAKVVVQLGK 137 (238)
Q Consensus 103 ~d~~~~~~~l~~~-------~---~~~i~l~G~S~GG~~a~~~a~ 137 (238)
+-+..++.++.++ + +..|.++||||||.+|..++.
T Consensus 157 EYV~dAIk~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~t 201 (973)
T KOG3724|consen 157 EYVNDAIKYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLT 201 (973)
T ss_pred HHHHHHHHHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHh
Confidence 5555666655433 1 456999999999999998763
No 178
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=97.09 E-value=0.0047 Score=49.53 Aligned_cols=104 Identities=13% Similarity=0.184 Sum_probs=49.0
Q ss_pred CeeEEEEeccCCCC--CchHHHHHHHHHHC--CCEEEeccCCCCCccCCCCCcchHhhHhhcCCCcchhcHHHHHHHHHh
Q 026476 39 KLAVLLISDVYGYE--APNLRKLADKVAAA--GFYVAVPDFFHGDPYVADGGKPLQEWIKDHGVDKGFEEAKPVIQALKS 114 (238)
Q Consensus 39 ~~~vl~~hg~~g~~--~~~~~~~a~~l~~~--G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~ 114 (238)
..+||++||++... ...+..+...+.+. |.-|.+++. |.+.... ....+... ...+++.+.+.++...+
T Consensus 5 ~~PvViwHGmGD~~~~~~~m~~i~~~i~~~~PG~yV~si~i--g~~~~~D---~~~s~f~~--v~~Qv~~vc~~l~~~p~ 77 (279)
T PF02089_consen 5 PLPVVIWHGMGDSCCNPSSMGSIKELIEEQHPGTYVHSIEI--GNDPSED---VENSFFGN--VNDQVEQVCEQLANDPE 77 (279)
T ss_dssp S--EEEE--TT--S--TTTHHHHHHHHHHHSTT--EEE--S--SSSHHHH---HHHHHHSH--HHHHHHHHHHHHHH-GG
T ss_pred CCcEEEEEcCccccCChhHHHHHHHHHHHhCCCceEEEEEE--CCCcchh---hhhhHHHH--HHHHHHHHHHHHhhChh
Confidence 46899999987542 22455666555554 777888776 2221100 00111110 01122223333332222
Q ss_pred cCCceEEEEEeeccHHHHHHccC---CcCceEEEEeccC
Q 026476 115 KGITAIGAAGFCWGAKVVVQLGK---REFIQAAVLLHPS 150 (238)
Q Consensus 115 ~~~~~i~l~G~S~GG~~a~~~a~---~~~i~a~i~~~~~ 150 (238)
. .+-+-++|||+||.+.-.++. .+.++..|.+.+.
T Consensus 78 L-~~G~~~IGfSQGgl~lRa~vq~c~~~~V~nlISlggp 115 (279)
T PF02089_consen 78 L-ANGFNAIGFSQGGLFLRAYVQRCNDPPVHNLISLGGP 115 (279)
T ss_dssp G-TT-EEEEEETCHHHHHHHHHHH-TSS-EEEEEEES--
T ss_pred h-hcceeeeeeccccHHHHHHHHHCCCCCceeEEEecCc
Confidence 2 257899999999999998772 4689999998654
No 179
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=97.07 E-value=0.002 Score=55.59 Aligned_cols=110 Identities=14% Similarity=0.059 Sum_probs=63.0
Q ss_pred eeEEEEeccCCCCCc--hHHHHHHHHHHC-CCEEEeccCC-CCCccCCCCCcchHhhHhhcCCCcchhcHHHHHHHHHhc
Q 026476 40 LAVLLISDVYGYEAP--NLRKLADKVAAA-GFYVAVPDFF-HGDPYVADGGKPLQEWIKDHGVDKGFEEAKPVIQALKSK 115 (238)
Q Consensus 40 ~~vl~~hg~~g~~~~--~~~~~a~~l~~~-G~~v~~~d~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~ 115 (238)
.+|+|+-|+-+.-.. ....+...||++ |-.+++.+++ .|.+.+..+ ...+-++-.+.++.++|+..+++.++.+
T Consensus 29 gpifl~~ggE~~~~~~~~~~~~~~~lA~~~~a~~v~lEHRyYG~S~P~~~--~s~~nL~yLt~~QALaD~a~F~~~~~~~ 106 (434)
T PF05577_consen 29 GPIFLYIGGEGPIEPFWINNGFMWELAKEFGALVVALEHRYYGKSQPFGD--LSTENLRYLTSEQALADLAYFIRYVKKK 106 (434)
T ss_dssp SEEEEEE--SS-HHHHHHH-HHHHHHHHHHTEEEEEE--TTSTTB-TTGG--GGGSTTTC-SHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCccchhhhcCChHHHHHHHcCCcEEEeehhhhcCCCCccc--cchhhHHhcCHHHHHHHHHHHHHHHHHh
Confidence 345555554443111 113466667776 8899999983 344443322 1112233345588999999999999854
Q ss_pred ----CCceEEEEEeeccHHHHHHcc-CCc-CceEEEEeccCC
Q 026476 116 ----GITAIGAAGFCWGAKVVVQLG-KRE-FIQAAVLLHPSF 151 (238)
Q Consensus 116 ----~~~~i~l~G~S~GG~~a~~~a-~~~-~i~a~i~~~~~~ 151 (238)
...|+.++|-|+||.+|.++- ..| .+.++++-+++.
T Consensus 107 ~~~~~~~pwI~~GgSY~G~Laaw~r~kyP~~~~ga~ASSapv 148 (434)
T PF05577_consen 107 YNTAPNSPWIVFGGSYGGALAAWFRLKYPHLFDGAWASSAPV 148 (434)
T ss_dssp TTTGCC--EEEEEETHHHHHHHHHHHH-TTT-SEEEEET--C
T ss_pred hcCCCCCCEEEECCcchhHHHHHHHhhCCCeeEEEEecccee
Confidence 345899999999999999976 566 566777666554
No 180
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=96.98 E-value=0.0032 Score=46.10 Aligned_cols=73 Identities=11% Similarity=0.055 Sum_probs=47.4
Q ss_pred hcHHHHHHHHHhc-CCceEEEEEeeccHHHHHHccC---C---cCceEEEEeccCCcCccc------ccccCCcEEEEec
Q 026476 103 EEAKPVIQALKSK-GITAIGAAGFCWGAKVVVQLGK---R---EFIQAAVLLHPSFVTVDD------IKGVEVPLSILGA 169 (238)
Q Consensus 103 ~d~~~~~~~l~~~-~~~~i~l~G~S~GG~~a~~~a~---~---~~i~a~i~~~~~~~~~~~------~~~~~~P~L~i~g 169 (238)
..+...++..... +..+|.++|||+||.+|.+++. . .....++.+.++...... .......+..++.
T Consensus 12 ~~i~~~~~~~~~~~p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p~~~~~~~~~~~~~~~~~~~~~~i~~ 91 (153)
T cd00741 12 NLVLPLLKSALAQYPDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPPRVGNAAFAEDRLDPSDALFVDRIVN 91 (153)
T ss_pred HHHHHHHHHHHHHCCCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCCcccchHHHHHhhhccCCccEEEEEE
Confidence 3344444443332 5679999999999999999772 1 245667777666554332 2234557888888
Q ss_pred CCCCCC
Q 026476 170 EIDRLS 175 (238)
Q Consensus 170 ~~D~~~ 175 (238)
..|.+.
T Consensus 92 ~~D~v~ 97 (153)
T cd00741 92 DNDIVP 97 (153)
T ss_pred CCCccC
Confidence 889763
No 181
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.90 E-value=0.0044 Score=48.90 Aligned_cols=39 Identities=21% Similarity=0.261 Sum_probs=28.9
Q ss_pred EEEEecCCCCCCCHHhHHHHHHHHhhcCCCCceEEEcCCCCeeee
Q 026476 164 LSILGAEIDRLSPPALVKEFEEALNAKSGVDSFVKIFPKVAHGWT 208 (238)
Q Consensus 164 ~L~i~g~~D~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~H~~~ 208 (238)
+.++.+++|..+|...+..+++.. +| +++...+ .||--.
T Consensus 309 ~ivv~A~~D~Yipr~gv~~lQ~~W---Pg--~eVr~~e-gGHVsa 347 (371)
T KOG1551|consen 309 IIVVQAKEDAYIPRTGVRSLQEIW---PG--CEVRYLE-GGHVSA 347 (371)
T ss_pred EEEEEecCCccccccCcHHHHHhC---CC--CEEEEee-cCceee
Confidence 567889999999998888888876 44 4555666 477554
No 182
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=96.89 E-value=0.095 Score=42.20 Aligned_cols=115 Identities=17% Similarity=0.168 Sum_probs=72.2
Q ss_pred eeCCeeEEEec-CCCCCeeEEEEeccCCCCCchH-----HHHHHHHHHCCCEEEeccCCCCCccCCCCCcchHhhHhhc-
Q 026476 24 KLGGLNAYVTG-SPDSKLAVLLISDVYGYEAPNL-----RKLADKVAAAGFYVAVPDFFHGDPYVADGGKPLQEWIKDH- 96 (238)
Q Consensus 24 ~~~~~~~~~~~-p~~~~~~vl~~hg~~g~~~~~~-----~~~a~~l~~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~- 96 (238)
..|.+..++.. |++++|++|=.|+..-++...+ ..-+..+..+ |.++-+|. +|+...... +...+
T Consensus 30 ~~G~v~V~V~Gd~~~~kpaiiTyhDlglN~~scFq~ff~~p~m~ei~~~-fcv~HV~~-PGqe~gAp~------~p~~y~ 101 (326)
T KOG2931|consen 30 AHGVVHVTVYGDPKGNKPAIITYHDLGLNHKSCFQGFFNFPDMAEILEH-FCVYHVDA-PGQEDGAPS------FPEGYP 101 (326)
T ss_pred ccccEEEEEecCCCCCCceEEEecccccchHhHhHHhhcCHhHHHHHhh-eEEEecCC-CccccCCcc------CCCCCC
Confidence 33567777774 4556678777887543321112 1334456666 89999998 777432211 11111
Q ss_pred --CCCcchhcHHHHHHHHHhcCCceEEEEEeeccHHHHHHcc-CCc-CceEEEEecc
Q 026476 97 --GVDKGFEEAKPVIQALKSKGITAIGAAGFCWGAKVVVQLG-KRE-FIQAAVLLHP 149 (238)
Q Consensus 97 --~~~~~~~d~~~~~~~l~~~~~~~i~l~G~S~GG~~a~~~a-~~~-~i~a~i~~~~ 149 (238)
+.+...+++..+++++ +.+.|.-+|--.|+++-.++| .+| ++.+.|+++.
T Consensus 102 yPsmd~LAd~l~~VL~~f---~lk~vIg~GvGAGAyIL~rFAl~hp~rV~GLvLIn~ 155 (326)
T KOG2931|consen 102 YPSMDDLADMLPEVLDHF---GLKSVIGMGVGAGAYILARFALNHPERVLGLVLINC 155 (326)
T ss_pred CCCHHHHHHHHHHHHHhc---CcceEEEecccccHHHHHHHHhcChhheeEEEEEec
Confidence 1244566667777666 567888899999999999988 444 7888888753
No 183
>PLN02633 palmitoyl protein thioesterase family protein
Probab=96.88 E-value=0.0083 Score=48.70 Aligned_cols=104 Identities=11% Similarity=0.076 Sum_probs=63.3
Q ss_pred CCCCCeeEEEEeccCCCC-CchHHHHHHHHHHC-CCEEEeccCCCCCccCCCCCcchHhhHhhcCCCcchhcHHHHHHHH
Q 026476 35 SPDSKLAVLLISDVYGYE-APNLRKLADKVAAA-GFYVAVPDFFHGDPYVADGGKPLQEWIKDHGVDKGFEEAKPVIQAL 112 (238)
Q Consensus 35 p~~~~~~vl~~hg~~g~~-~~~~~~~a~~l~~~-G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l 112 (238)
|-....++|++||.+... ...+..+.+.+.+. |.-+.++.. |.+.. ..|+. ...++++.+.+.+...
T Consensus 21 ~~~~~~P~ViwHG~GD~c~~~g~~~~~~l~~~~~g~~~~~i~i--g~~~~-------~s~~~--~~~~Qve~vce~l~~~ 89 (314)
T PLN02633 21 HVSVSVPFIMLHGIGTQCSDATNANFTQLLTNLSGSPGFCLEI--GNGVG-------DSWLM--PLTQQAEIACEKVKQM 89 (314)
T ss_pred cccCCCCeEEecCCCcccCCchHHHHHHHHHhCCCCceEEEEE--CCCcc-------cccee--CHHHHHHHHHHHHhhc
Confidence 334456899999986532 34677888888664 777777665 33211 01211 1123334444444333
Q ss_pred HhcCCceEEEEEeeccHHHHHHccC---C-cCceEEEEeccC
Q 026476 113 KSKGITAIGAAGFCWGAKVVVQLGK---R-EFIQAAVLLHPS 150 (238)
Q Consensus 113 ~~~~~~~i~l~G~S~GG~~a~~~a~---~-~~i~a~i~~~~~ 150 (238)
++. .+-+-++|||+||.++-.+.. . |.++..|.+.+.
T Consensus 90 ~~l-~~G~naIGfSQGGlflRa~ierc~~~p~V~nlISlggp 130 (314)
T PLN02633 90 KEL-SQGYNIVGRSQGNLVARGLIEFCDGGPPVYNYISLAGP 130 (314)
T ss_pred hhh-hCcEEEEEEccchHHHHHHHHHCCCCCCcceEEEecCC
Confidence 333 235889999999999998762 3 679999888653
No 184
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=96.82 E-value=0.0069 Score=53.89 Aligned_cols=103 Identities=14% Similarity=0.078 Sum_probs=63.8
Q ss_pred eeEEEecCCCC----CeeEEEEeccC---CCCCc-hHHHHHHHHHHCCCEEEeccCCCCC-cc-CCCCCcchHhhHhhcC
Q 026476 28 LNAYVTGSPDS----KLAVLLISDVY---GYEAP-NLRKLADKVAAAGFYVAVPDFFHGD-PY-VADGGKPLQEWIKDHG 97 (238)
Q Consensus 28 ~~~~~~~p~~~----~~~vl~~hg~~---g~~~~-~~~~~a~~l~~~G~~v~~~d~~~g~-~~-~~~~~~~~~~~~~~~~ 97 (238)
+..-++.|+.. .|++|++||+. |.... ........+..+..+|+.+.++-|. |. +.++... .
T Consensus 97 LylNV~tp~~~~~~~~pV~V~iHGG~~~~gs~~~~~~~~~~~~~~~~~VVvVt~~YRLG~lGF~st~d~~~--------~ 168 (545)
T KOG1516|consen 97 LYLNVYTPQGCSESKLPVMVYIHGGGFQFGSASSFEIISPAYVLLLKDVVVVTINYRLGPLGFLSTGDSAA--------P 168 (545)
T ss_pred ceEEEeccCCCccCCCCEEEEEeCCceeeccccchhhcCchhccccCCEEEEEecccceeceeeecCCCCC--------C
Confidence 55666667632 58899999863 22101 1223333344457889999984232 21 1111000 1
Q ss_pred CCcchhcHHHHHHHHHhc------CCceEEEEEeeccHHHHHHccCC
Q 026476 98 VDKGFEEAKPVIQALKSK------GITAIGAAGFCWGAKVVVQLGKR 138 (238)
Q Consensus 98 ~~~~~~d~~~~~~~l~~~------~~~~i~l~G~S~GG~~a~~~a~~ 138 (238)
-.-.+.|...+++|+++. ++++|.++|||.||..+..++..
T Consensus 169 gN~gl~Dq~~AL~wv~~~I~~FGGdp~~vTl~G~saGa~~v~~l~~S 215 (545)
T KOG1516|consen 169 GNLGLFDQLLALRWVKDNIPSFGGDPKNVTLFGHSAGAASVSLLTLS 215 (545)
T ss_pred CcccHHHHHHHHHHHHHHHHhcCCCCCeEEEEeechhHHHHHHHhcC
Confidence 123456899999999876 58899999999999999887643
No 185
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=96.79 E-value=0.0033 Score=53.48 Aligned_cols=84 Identities=17% Similarity=0.180 Sum_probs=57.4
Q ss_pred hHHHHHHHHHHCCCEEE----e--ccCCCCCccCCCCCcchHhhHhhcCCCcchhcHHHHHHHHHhcCCceEEEEEeecc
Q 026476 55 NLRKLADKVAAAGFYVA----V--PDFFHGDPYVADGGKPLQEWIKDHGVDKGFEEAKPVIQALKSKGITAIGAAGFCWG 128 (238)
Q Consensus 55 ~~~~~a~~l~~~G~~v~----~--~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~i~l~G~S~G 128 (238)
.+..+++.|.+.||..= + +|+ |-... ..+.....++..|+.+.+....|+.|+|||||
T Consensus 66 ~~~~li~~L~~~GY~~~~~l~~~pYDW-R~~~~---------------~~~~~~~~lk~~ie~~~~~~~~kv~li~HSmG 129 (389)
T PF02450_consen 66 YFAKLIENLEKLGYDRGKDLFAAPYDW-RLSPA---------------ERDEYFTKLKQLIEEAYKKNGKKVVLIAHSMG 129 (389)
T ss_pred hHHHHHHHHHhcCcccCCEEEEEeech-hhchh---------------hHHHHHHHHHHHHHHHHHhcCCcEEEEEeCCC
Confidence 57899999999887642 1 343 11110 01234456777777766655789999999999
Q ss_pred HHHHHHcc-CC-------cCceEEEEeccCCcCc
Q 026476 129 AKVVVQLG-KR-------EFIQAAVLLHPSFVTV 154 (238)
Q Consensus 129 G~~a~~~a-~~-------~~i~a~i~~~~~~~~~ 154 (238)
|.++..+. .. ..|++.|.+.+++...
T Consensus 130 gl~~~~fl~~~~~~~W~~~~i~~~i~i~~p~~Gs 163 (389)
T PF02450_consen 130 GLVARYFLQWMPQEEWKDKYIKRFISIGTPFGGS 163 (389)
T ss_pred chHHHHHHHhccchhhHHhhhhEEEEeCCCCCCC
Confidence 99999854 21 2599999998887643
No 186
>COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only]
Probab=96.78 E-value=0.0021 Score=52.91 Aligned_cols=90 Identities=14% Similarity=0.120 Sum_probs=70.5
Q ss_pred CCceEEEEEeeccHHHHHHcc-CCcCceEEEEe-----------------cc-CCcC----------------c------
Q 026476 116 GITAIGAAGFCWGAKVVVQLG-KREFIQAAVLL-----------------HP-SFVT----------------V------ 154 (238)
Q Consensus 116 ~~~~i~l~G~S~GG~~a~~~a-~~~~i~a~i~~-----------------~~-~~~~----------------~------ 154 (238)
..+...+.|-|-=|+.+++.| .+|++.+++.+ || .+.. +
T Consensus 232 ~Ik~F~VTGaSKRgWttwLTAIaDprv~aIvp~v~D~Lni~a~L~hiyrsYGgnwpi~l~pyyaegi~erl~tp~fkqL~ 311 (507)
T COG4287 232 EIKGFMVTGASKRGWTTWLTAIADPRVFAIVPFVYDNLNIEAQLLHIYRSYGGNWPIKLAPYYAEGIDERLETPLFKQLL 311 (507)
T ss_pred eeeeEEEeccccchHHHHHHHhcCcchhhhhhhHHhhcccHHHHHHHHHhhCCCCCcccchhHhhhHHHhhcCHHHHHHH
Confidence 577899999999999999988 88888888765 22 1110 0
Q ss_pred -----------ccccccCCcEEEEecCCCCCCCHHhHHHHHHHHhhcCCCCceEEEcCCCCeeeee
Q 026476 155 -----------DDIKGVEVPLSILGAEIDRLSPPALVKEFEEALNAKSGVDSFVKIFPKVAHGWTV 209 (238)
Q Consensus 155 -----------~~~~~~~~P~L~i~g~~D~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~H~~~~ 209 (238)
....++..|-.++.+..|.+++++.+.-.++.+ +| ..-+...|++.|...+
T Consensus 312 ~IiDPlay~~try~~RLalpKyivnaSgDdff~pDsa~lYyd~L---PG-~kaLrmvPN~~H~~~n 373 (507)
T COG4287 312 EIIDPLAYRNTRYQLRLALPKYIVNASGDDFFVPDSANLYYDDL---PG-EKALRMVPNDPHNLIN 373 (507)
T ss_pred HhhcHHHHhhhhhhhhccccceeecccCCcccCCCccceeeccC---CC-ceeeeeCCCCcchhhH
Confidence 013566789999999999999999999999987 56 3458899999998865
No 187
>PLN02606 palmitoyl-protein thioesterase
Probab=96.68 E-value=0.012 Score=47.79 Aligned_cols=100 Identities=13% Similarity=0.058 Sum_probs=58.8
Q ss_pred CCeeEEEEeccCC-CCCchHHHHHHHHHHC-CCEEEeccCCCCCccCCCCCcchHhhHhhcCCCcchhcHHHHHHHHHhc
Q 026476 38 SKLAVLLISDVYG-YEAPNLRKLADKVAAA-GFYVAVPDFFHGDPYVADGGKPLQEWIKDHGVDKGFEEAKPVIQALKSK 115 (238)
Q Consensus 38 ~~~~vl~~hg~~g-~~~~~~~~~a~~l~~~-G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~ 115 (238)
...+||++||.+. .....+..+.+.+.+. |+-+.++.. |.+.. . .+.. ...++++.+.+.+...++.
T Consensus 25 ~~~PvViwHGlgD~~~~~~~~~~~~~i~~~~~~pg~~v~i--g~~~~----~---s~~~--~~~~Qv~~vce~l~~~~~L 93 (306)
T PLN02606 25 LSVPFVLFHGFGGECSNGKVSNLTQFLINHSGYPGTCVEI--GNGVQ----D---SLFM--PLRQQASIACEKIKQMKEL 93 (306)
T ss_pred CCCCEEEECCCCcccCCchHHHHHHHHHhCCCCCeEEEEE--CCCcc----c---cccc--CHHHHHHHHHHHHhcchhh
Confidence 3468999999873 2235778888888533 665555554 21110 0 1110 1122334444444333333
Q ss_pred CCceEEEEEeeccHHHHHHcc-C--C-cCceEEEEecc
Q 026476 116 GITAIGAAGFCWGAKVVVQLG-K--R-EFIQAAVLLHP 149 (238)
Q Consensus 116 ~~~~i~l~G~S~GG~~a~~~a-~--~-~~i~a~i~~~~ 149 (238)
.+-+-++|||+||.+.-.++ + . |.++..|.+.+
T Consensus 94 -~~G~naIGfSQGglflRa~ierc~~~p~V~nlISlgg 130 (306)
T PLN02606 94 -SEGYNIVAESQGNLVARGLIEFCDNAPPVINYVSLGG 130 (306)
T ss_pred -cCceEEEEEcchhHHHHHHHHHCCCCCCcceEEEecC
Confidence 23588999999999999877 2 3 57888888754
No 188
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=96.63 E-value=0.0087 Score=44.91 Aligned_cols=75 Identities=16% Similarity=0.202 Sum_probs=53.4
Q ss_pred chhcHHHHHHHHHhc--CCceEEEEEeeccHHHHHHccCC--cCceEEEEeccCCcCcccccccC---CcEEEEecCCCC
Q 026476 101 GFEEAKPVIQALKSK--GITAIGAAGFCWGAKVVVQLGKR--EFIQAAVLLHPSFVTVDDIKGVE---VPLSILGAEIDR 173 (238)
Q Consensus 101 ~~~d~~~~~~~l~~~--~~~~i~l~G~S~GG~~a~~~a~~--~~i~a~i~~~~~~~~~~~~~~~~---~P~L~i~g~~D~ 173 (238)
...++..+++-|+.. +..++.++|||+|..++-..++. ..+..++.+..+........++. ..+....+.+|+
T Consensus 90 ga~~L~~f~~gl~a~~~~~~~~tv~GHSYGS~v~G~A~~~~~~~vddvv~~GSPG~g~~~a~~l~~~~~~v~a~~a~~D~ 169 (177)
T PF06259_consen 90 GAPRLARFLDGLRATHGPDAHLTVVGHSYGSTVVGLAAQQGGLRVDDVVLVGSPGMGVDSASDLGVPPGHVYAMTAPGDP 169 (177)
T ss_pred HHHHHHHHHHHhhhhcCCCCCEEEEEecchhHHHHHHhhhCCCCcccEEEECCCCCCCCCHHHcCCCCCcEEEeeCCCCC
Confidence 344566666666554 45699999999999999998855 47888888777666554444444 348888888887
Q ss_pred CC
Q 026476 174 LS 175 (238)
Q Consensus 174 ~~ 175 (238)
+-
T Consensus 170 I~ 171 (177)
T PF06259_consen 170 IA 171 (177)
T ss_pred cc
Confidence 63
No 189
>KOG2521 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.60 E-value=0.074 Score=44.24 Aligned_cols=177 Identities=12% Similarity=0.054 Sum_probs=107.3
Q ss_pred CeeEEEEeccCCCCCchHHHHHHHHHHCCCEEEeccCCCCCccCCCCCcchHhhHhhcCCCcchhcHHHHHHHHHh-c--
Q 026476 39 KLAVLLISDVYGYEAPNLRKLADKVAAAGFYVAVPDFFHGDPYVADGGKPLQEWIKDHGVDKGFEEAKPVIQALKS-K-- 115 (238)
Q Consensus 39 ~~~vl~~hg~~g~~~~~~~~~a~~l~~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~-~-- 115 (238)
.++|+++-||.|.....+...+..+.+.||.++..-.. -...... .....-....+...+..+.+ .
T Consensus 38 ~k~Iv~~~gWag~~~r~l~ky~~~Yq~~g~~~~~~tap-~~~~~~~----------~s~~~~sl~~~~~~l~~L~~~~~~ 106 (350)
T KOG2521|consen 38 EKPIVVLLGWAGAIDRNLMKYSKIYQDKGYIVVRITAP-CPSVFLS----------ASRRILSLSLASTRLSELLSDYNS 106 (350)
T ss_pred cccEEEEeeeccccchhHHHHHHHHhcCCceEEEecCc-ccccccc----------cccccchhhHHHHHHHHHhhhccC
Confidence 35788888999976666777888888889999877762 2211111 00111122233223322222 2
Q ss_pred CCceEEEEEeeccHHHHHH-c--c--CC-c---CceEEEEe-ccCCc---------------------------------
Q 026476 116 GITAIGAAGFCWGAKVVVQ-L--G--KR-E---FIQAAVLL-HPSFV--------------------------------- 152 (238)
Q Consensus 116 ~~~~i~l~G~S~GG~~a~~-~--a--~~-~---~i~a~i~~-~~~~~--------------------------------- 152 (238)
+..+|.+-=||+||...+. + + .. | ++...+.+ ..+..
T Consensus 107 ~~~pi~fh~FS~ng~~~~~si~~~~~~~~~~~~~~~~~~~fdS~p~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~i~~~ 186 (350)
T KOG2521|consen 107 DPCPIIFHVFSGNGVRLMYSISLQLIKHEPKAAQLSGGIIFDSAPARSSPVQLGWAVSFSSPPDDYVARWARLNYHITLL 186 (350)
T ss_pred CcCceEEEEecCCceeehHHHHHHHhhcCchhHhhcCCceEeccccccchhhhcceeccccCchhhHHHHHhcCeEEEEE
Confidence 4668888899999987665 2 1 11 2 11111111 00000
Q ss_pred -------------------C-----------cccccccCCcEEEEecCCCCCCCHHhHHHHHHHHhhcCCCCceEEEcCC
Q 026476 153 -------------------T-----------VDDIKGVEVPLSILGAEIDRLSPPALVKEFEEALNAKSGVDSFVKIFPK 202 (238)
Q Consensus 153 -------------------~-----------~~~~~~~~~P~L~i~g~~D~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g 202 (238)
. ..+-.....+.|.+.+..|.++|.+..+++.+.. ++.|..+.-.-+.+
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~ly~~s~~d~v~~~~~ie~f~~~~-~~~g~~v~s~~~~d 265 (350)
T KOG2521|consen 187 TMAGNEGGAYLLGPLAEKISMSRKYHFLDRYEEQRNELPWNQLYLYSDNDDVLPADEIEKFIALR-REKGVNVKSVKFKD 265 (350)
T ss_pred EeeecccchhhhhhhhhccccccchHHHHHHHhhhhcccccceeecCCccccccHHHHHHHHHHH-HhcCceEEEeeccC
Confidence 0 0001112558889999999999999999998877 56777888888888
Q ss_pred CCeeeeecCCCCCHHHHHHHHHHHHHHHHHHHHh
Q 026476 203 VAHGWTVRYNVEDETAVKAAEEAHHNLLEWFAKY 236 (238)
Q Consensus 203 ~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~ 236 (238)
+.|--+.+..+ ...++...+|++..
T Consensus 266 s~H~~h~r~~p---------~~y~~~~~~Fl~~~ 290 (350)
T KOG2521|consen 266 SEHVAHFRSFP---------KTYLKKCSEFLRSV 290 (350)
T ss_pred ccceeeeccCc---------HHHHHHHHHHHHhc
Confidence 88977665544 46778888888763
No 190
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=96.34 E-value=0.017 Score=50.23 Aligned_cols=91 Identities=15% Similarity=0.133 Sum_probs=54.4
Q ss_pred CCeeEEEEeccCCCCCchHHHHHH-------------------HHHHCCCEEEeccCCCCCccCCCCCcchHhhHhhcCC
Q 026476 38 SKLAVLLISDVYGYEAPNLRKLAD-------------------KVAAAGFYVAVPDFFHGDPYVADGGKPLQEWIKDHGV 98 (238)
Q Consensus 38 ~~~~vl~~hg~~g~~~~~~~~~a~-------------------~l~~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~ 98 (238)
+.|.||.++|+.|.. . +..+.. .+.+. ..++.+|.+.|.|.+...... . ....
T Consensus 76 ~~Pl~lwlnGGPG~s-s-~~G~f~E~GP~~i~~~~~~~~~n~~sW~~~-~~~l~iDqP~G~G~S~~~~~~---~--~~~~ 147 (462)
T PTZ00472 76 EAPVLLWMTGGPGCS-S-MFALLAENGPCLMNETTGDIYNNTYSWNNE-AYVIYVDQPAGVGFSYADKAD---Y--DHNE 147 (462)
T ss_pred CCCEEEEECCCCcHH-H-HHhhhccCCCeEEeCCCCceeECCcccccc-cCeEEEeCCCCcCcccCCCCC---C--CCCh
Confidence 458899999988853 1 111110 12222 567777765566666542111 1 1122
Q ss_pred CcchhcHHHHHHHHHhc----CCceEEEEEeeccHHHHHHcc
Q 026476 99 DKGFEEAKPVIQALKSK----GITAIGAAGFCWGAKVVVQLG 136 (238)
Q Consensus 99 ~~~~~d~~~~~~~l~~~----~~~~i~l~G~S~GG~~a~~~a 136 (238)
++..+|+..+++.+-++ ...++.|+|+|+||..+..+|
T Consensus 148 ~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a 189 (462)
T PTZ00472 148 SEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATA 189 (462)
T ss_pred HHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHH
Confidence 45667777777644332 347999999999999888766
No 191
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.25 E-value=0.052 Score=40.14 Aligned_cols=99 Identities=12% Similarity=0.231 Sum_probs=60.6
Q ss_pred HHHHHHHHhc-CCceEEEEEeeccHHHHHHcc-CCc-CceEEEEeccCCcC-----------------cccccccC----
Q 026476 106 KPVIQALKSK-GITAIGAAGFCWGAKVVVQLG-KRE-FIQAAVLLHPSFVT-----------------VDDIKGVE---- 161 (238)
Q Consensus 106 ~~~~~~l~~~-~~~~i~l~G~S~GG~~a~~~a-~~~-~i~a~i~~~~~~~~-----------------~~~~~~~~---- 161 (238)
.+.-+++.+. -+.+..+-|.||||..|..+. +.| ....+|+++|.... .+.++.+.
T Consensus 88 ~AyerYv~eEalpgs~~~sgcsmGayhA~nfvfrhP~lftkvialSGvYdardffg~yyddDv~ynsP~dylpg~~dp~~ 167 (227)
T COG4947 88 RAYERYVIEEALPGSTIVSGCSMGAYHAANFVFRHPHLFTKVIALSGVYDARDFFGGYYDDDVYYNSPSDYLPGLADPFR 167 (227)
T ss_pred HHHHHHHHHhhcCCCccccccchhhhhhhhhheeChhHhhhheeecceeeHHHhccccccCceeecChhhhccCCcChHH
Confidence 3344455544 234566889999999999976 666 45667777654321 11122222
Q ss_pred ------CcEEEEecCCCCCCCHHhHHHHHHHHhhcCCCCceEEEcCCCCeee
Q 026476 162 ------VPLSILGAEIDRLSPPALVKEFEEALNAKSGVDSFVKIFPKVAHGW 207 (238)
Q Consensus 162 ------~P~L~i~g~~D~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~H~~ 207 (238)
..+.+-.|.+|++.+. .+.+.+.+ ++..++..+++++|..|.+
T Consensus 168 l~rlr~~~~vfc~G~e~~~L~~--~~~L~~~l-~dKqipaw~~~WggvaHdw 216 (227)
T COG4947 168 LERLRRIDMVFCIGDEDPFLDN--NQHLSRLL-SDKQIPAWMHVWGGVAHDW 216 (227)
T ss_pred HHHHhhccEEEEecCccccccc--hHHHHHHh-ccccccHHHHHhccccccc
Confidence 2456677878877643 34556666 4445577777888877776
No 192
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=96.22 E-value=0.027 Score=43.55 Aligned_cols=37 Identities=11% Similarity=0.066 Sum_probs=29.0
Q ss_pred CCceEEEEEeeccHHHHHHccCCcCceEEEEeccCCc
Q 026476 116 GITAIGAAGFCWGAKVVVQLGKREFIQAAVLLHPSFV 152 (238)
Q Consensus 116 ~~~~i~l~G~S~GG~~a~~~a~~~~i~a~i~~~~~~~ 152 (238)
..++|.|+++|||-+.|..+.....++..+++.|...
T Consensus 55 ~y~~i~lvAWSmGVw~A~~~l~~~~~~~aiAINGT~~ 91 (213)
T PF04301_consen 55 GYREIYLVAWSMGVWAANRVLQGIPFKRAIAINGTPY 91 (213)
T ss_pred cCceEEEEEEeHHHHHHHHHhccCCcceeEEEECCCC
Confidence 3579999999999999998765556777777776543
No 193
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=96.21 E-value=0.0058 Score=43.81 Aligned_cols=33 Identities=15% Similarity=0.141 Sum_probs=23.3
Q ss_pred cHHHHHHHHHhc-CCceEEEEEeeccHHHHHHcc
Q 026476 104 EAKPVIQALKSK-GITAIGAAGFCWGAKVVVQLG 136 (238)
Q Consensus 104 d~~~~~~~l~~~-~~~~i~l~G~S~GG~~a~~~a 136 (238)
.+.+.++.+.+. ...+|.+.|||+||.+|..++
T Consensus 49 ~~~~~l~~~~~~~~~~~i~itGHSLGGalA~l~a 82 (140)
T PF01764_consen 49 QILDALKELVEKYPDYSIVITGHSLGGALASLAA 82 (140)
T ss_dssp HHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHH
T ss_pred HHHHHHHHHHhcccCccchhhccchHHHHHHHHH
Confidence 334444333333 457999999999999999976
No 194
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=96.19 E-value=0.026 Score=46.82 Aligned_cols=103 Identities=18% Similarity=0.262 Sum_probs=66.0
Q ss_pred eeCCeeEEEec---CC----CCCeeEEEEeccCCCCCchHHHHHHHHHHC---C------CEEEeccCCCCCccCCCCCc
Q 026476 24 KLGGLNAYVTG---SP----DSKLAVLLISDVYGYEAPNLRKLADKVAAA---G------FYVAVPDFFHGDPYVADGGK 87 (238)
Q Consensus 24 ~~~~~~~~~~~---p~----~~~~~vl~~hg~~g~~~~~~~~~a~~l~~~---G------~~v~~~d~~~g~~~~~~~~~ 87 (238)
.|+|+.+.... |. ++..++|++|||.|+- ..+-.+...|..- | |-|++|.. +|.+++....+
T Consensus 130 eIeGL~iHFlhvk~p~~k~~k~v~PlLl~HGwPGsv-~EFykfIPlLT~p~~hg~~~d~~FEVI~PSl-PGygwSd~~sk 207 (469)
T KOG2565|consen 130 EIEGLKIHFLHVKPPQKKKKKKVKPLLLLHGWPGSV-REFYKFIPLLTDPKRHGNESDYAFEVIAPSL-PGYGWSDAPSK 207 (469)
T ss_pred hhcceeEEEEEecCCccccCCcccceEEecCCCchH-HHHHhhhhhhcCccccCCccceeEEEeccCC-CCcccCcCCcc
Confidence 56677665542 32 1236899999999974 3445666666543 2 77999999 99999875422
Q ss_pred chHhhHhhcCCCcchhcHHHHHHHHHhcCCceEEEEEeeccHHHHHHccC
Q 026476 88 PLQEWIKDHGVDKGFEEAKPVIQALKSKGITAIGAAGFCWGAKVVVQLGK 137 (238)
Q Consensus 88 ~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~i~l~G~S~GG~~a~~~a~ 137 (238)
. ++. .++-++-+-...-..+.++..+=|--||..++..+|.
T Consensus 208 ~--------GFn-~~a~ArvmrkLMlRLg~nkffiqGgDwGSiI~snlas 248 (469)
T KOG2565|consen 208 T--------GFN-AAATARVMRKLMLRLGYNKFFIQGGDWGSIIGSNLAS 248 (469)
T ss_pred C--------Ccc-HHHHHHHHHHHHHHhCcceeEeecCchHHHHHHHHHh
Confidence 1 111 1111111222333448899999999999999999883
No 195
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=96.14 E-value=0.0099 Score=46.51 Aligned_cols=38 Identities=11% Similarity=-0.004 Sum_probs=30.8
Q ss_pred CCceEEEEEeeccHHHHHHccCC------cCceEEEEeccCCcC
Q 026476 116 GITAIGAAGFCWGAKVVVQLGKR------EFIQAAVLLHPSFVT 153 (238)
Q Consensus 116 ~~~~i~l~G~S~GG~~a~~~a~~------~~i~a~i~~~~~~~~ 153 (238)
...+|.+.|||.||.+|..++.. ++|..+..+.|+...
T Consensus 82 ~~~~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDgPGf~ 125 (224)
T PF11187_consen 82 YPGKIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDGPGFS 125 (224)
T ss_pred CCCCEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeCCCCC
Confidence 44579999999999999997632 378999999887764
No 196
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=96.04 E-value=0.11 Score=43.80 Aligned_cols=52 Identities=13% Similarity=0.046 Sum_probs=41.0
Q ss_pred cCCCcchhcHHHHHHHHHhcCCceEEEEEeeccHHHHHHccC-Cc-CceEEEEe
Q 026476 96 HGVDKGFEEAKPVIQALKSKGITAIGAAGFCWGAKVVVQLGK-RE-FIQAAVLL 147 (238)
Q Consensus 96 ~~~~~~~~d~~~~~~~l~~~~~~~i~l~G~S~GG~~a~~~a~-~~-~i~a~i~~ 147 (238)
.+..+...|.-++++.++..-.++-.-.|.|-||++++..=+ .| .+++.|..
T Consensus 112 Lti~QAA~D~Hri~~A~K~iY~~kWISTG~SKGGmTa~y~rrFyP~DVD~tVaY 165 (448)
T PF05576_consen 112 LTIWQAASDQHRIVQAFKPIYPGKWISTGGSKGGMTAVYYRRFYPDDVDGTVAY 165 (448)
T ss_pred ccHhHhhHHHHHHHHHHHhhccCCceecCcCCCceeEEEEeeeCCCCCCeeeee
Confidence 455678899999999999886678888999999999987653 23 67777765
No 197
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=95.82 E-value=0.021 Score=47.99 Aligned_cols=99 Identities=11% Similarity=0.131 Sum_probs=63.2
Q ss_pred eeEEEEeccCCC------CCchHHHHHHHHHHCCCEEEeccC-CCCCccCCCCC-cchHhhHhhcCCCcchhcHHHHHHH
Q 026476 40 LAVLLISDVYGY------EAPNLRKLADKVAAAGFYVAVPDF-FHGDPYVADGG-KPLQEWIKDHGVDKGFEEAKPVIQA 111 (238)
Q Consensus 40 ~~vl~~hg~~g~------~~~~~~~~a~~l~~~G~~v~~~d~-~~g~~~~~~~~-~~~~~~~~~~~~~~~~~d~~~~~~~ 111 (238)
.+|++..|--|. +...+.++|..| +..+|-+++ |.|...+.+.. ....+...-.+.++.+.|...++..
T Consensus 81 gPIffYtGNEGdie~Fa~ntGFm~D~Ap~~---~AllVFaEHRyYGeS~PFG~~s~k~~~hlgyLtseQALADfA~ll~~ 157 (492)
T KOG2183|consen 81 GPIFFYTGNEGDIEWFANNTGFMWDLAPEL---KALLVFAEHRYYGESLPFGSQSYKDARHLGYLTSEQALADFAELLTF 157 (492)
T ss_pred CceEEEeCCcccHHHHHhccchHHhhhHhh---CceEEEeehhccccCCCCcchhccChhhhccccHHHHHHHHHHHHHH
Confidence 578888876552 223333444433 555666676 35665554431 1112222333447888999999999
Q ss_pred HHhc---CCceEEEEEeeccHHHHHHcc-CCcCc
Q 026476 112 LKSK---GITAIGAAGFCWGAKVVVQLG-KREFI 141 (238)
Q Consensus 112 l~~~---~~~~i~l~G~S~GG~~a~~~a-~~~~i 141 (238)
+++. ...+|.++|-|+||+++.++= ..|.|
T Consensus 158 lK~~~~a~~~pvIafGGSYGGMLaAWfRlKYPHi 191 (492)
T KOG2183|consen 158 LKRDLSAEASPVIAFGGSYGGMLAAWFRLKYPHI 191 (492)
T ss_pred HhhccccccCcEEEecCchhhHHHHHHHhcChhh
Confidence 9876 356899999999999999864 66643
No 198
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=95.66 E-value=0.031 Score=43.82 Aligned_cols=72 Identities=10% Similarity=-0.013 Sum_probs=39.7
Q ss_pred hcHHHHHHHHHhc-CCceEEEEEeeccHHHHHHccCC------cCceEEEEeccCCcCccccc----ccCCcEEEEecCC
Q 026476 103 EEAKPVIQALKSK-GITAIGAAGFCWGAKVVVQLGKR------EFIQAAVLLHPSFVTVDDIK----GVEVPLSILGAEI 171 (238)
Q Consensus 103 ~d~~~~~~~l~~~-~~~~i~l~G~S~GG~~a~~~a~~------~~i~a~i~~~~~~~~~~~~~----~~~~P~L~i~g~~ 171 (238)
.++...+..++++ +..+|.+.|||+||.+|.+++.. ...-.++.+.++......+. ....-++-+.-.+
T Consensus 112 ~~~~~~~~~~~~~~p~~~i~vtGHSLGGaiA~l~a~~l~~~~~~~~i~~~tFg~P~vg~~~~a~~~~~~~~~~~rvv~~~ 191 (229)
T cd00519 112 NQVLPELKSALKQYPDYKIIVTGHSLGGALASLLALDLRLRGPGSDVTVYTFGQPRVGNAAFAEYLESTKGRVYRVVHGN 191 (229)
T ss_pred HHHHHHHHHHHhhCCCceEEEEccCHHHHHHHHHHHHHHhhCCCCceEEEEeCCCCCCCHHHHHHhhccCCCEEEEEECC
Confidence 3444444433333 45799999999999999987631 22233445555444333332 2333344444447
Q ss_pred CCC
Q 026476 172 DRL 174 (238)
Q Consensus 172 D~~ 174 (238)
|.+
T Consensus 192 D~V 194 (229)
T cd00519 192 DIV 194 (229)
T ss_pred Ccc
Confidence 754
No 199
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=95.50 E-value=0.028 Score=49.68 Aligned_cols=89 Identities=15% Similarity=0.150 Sum_probs=57.0
Q ss_pred HHHHHHHHHHCCCEEEeccCCCCCccCCCCCcchHhhHhhcCCCcchhcHHHHHHHHHhc-CCceEEEEEeeccHHHHHH
Q 026476 56 LRKLADKVAAAGFYVAVPDFFHGDPYVADGGKPLQEWIKDHGVDKGFEEAKPVIQALKSK-GITAIGAAGFCWGAKVVVQ 134 (238)
Q Consensus 56 ~~~~a~~l~~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~-~~~~i~l~G~S~GG~~a~~ 134 (238)
+..+.+.|++.||. --++ .+-+++-.- .. ......++....++..|+.+.+. +..|+.|+||||||.+++.
T Consensus 158 w~kLIe~L~~iGY~--~~nL-~gAPYDWRl--s~---~~le~rd~YF~rLK~lIE~ay~~nggkKVVLV~HSMGglv~ly 229 (642)
T PLN02517 158 WAVLIANLARIGYE--EKNM-YMAAYDWRL--SF---QNTEVRDQTLSRLKSNIELMVATNGGKKVVVVPHSMGVLYFLH 229 (642)
T ss_pred HHHHHHHHHHcCCC--CCce-eeccccccc--Cc---cchhhhhHHHHHHHHHHHHHHHHcCCCeEEEEEeCCchHHHHH
Confidence 37899999999997 3454 444433210 00 00001134556678888877655 4679999999999999997
Q ss_pred ccC-----------------CcCceEEEEeccCCc
Q 026476 135 LGK-----------------REFIQAAVLLHPSFV 152 (238)
Q Consensus 135 ~a~-----------------~~~i~a~i~~~~~~~ 152 (238)
+.. +..|++.|.+.+++.
T Consensus 230 FL~wv~~~~~~gG~gG~~W~dKyI~s~I~Iagp~l 264 (642)
T PLN02517 230 FMKWVEAPAPMGGGGGPGWCAKHIKAVMNIGGPFL 264 (642)
T ss_pred HHHhccccccccCCcchHHHHHHHHHheecccccC
Confidence 431 014788888877654
No 200
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=95.47 E-value=0.041 Score=41.78 Aligned_cols=80 Identities=16% Similarity=0.027 Sum_probs=46.9
Q ss_pred chHHHHHHHHHHCCCEEEeccCCCCCccCCCCCcchHhhHhhcCCCcchhcHHHHHHHHHhc-CCceEEEEEeeccHHHH
Q 026476 54 PNLRKLADKVAAAGFYVAVPDFFHGDPYVADGGKPLQEWIKDHGVDKGFEEAKPVIQALKSK-GITAIGAAGFCWGAKVV 132 (238)
Q Consensus 54 ~~~~~~a~~l~~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~-~~~~i~l~G~S~GG~~a 132 (238)
..+..++..|.. .+.|+.++. +|.+........ ....+...++.+... +..++.++|||+||.++
T Consensus 13 ~~~~~~~~~l~~-~~~v~~~~~-~g~~~~~~~~~~------------~~~~~~~~~~~l~~~~~~~~~~l~g~s~Gg~~a 78 (212)
T smart00824 13 HEYARLAAALRG-RRDVSALPL-PGFGPGEPLPAS------------ADALVEAQAEAVLRAAGGRPFVLVGHSSGGLLA 78 (212)
T ss_pred HHHHHHHHhcCC-CccEEEecC-CCCCCCCCCCCC------------HHHHHHHHHHHHHHhcCCCCeEEEEECHHHHHH
Confidence 456778887765 588999998 666433211111 111122223333332 35689999999999999
Q ss_pred HHccCC-----cCceEEEEe
Q 026476 133 VQLGKR-----EFIQAAVLL 147 (238)
Q Consensus 133 ~~~a~~-----~~i~a~i~~ 147 (238)
..++.. ..+...+.+
T Consensus 79 ~~~a~~l~~~~~~~~~l~~~ 98 (212)
T smart00824 79 HAVAARLEARGIPPAAVVLL 98 (212)
T ss_pred HHHHHHHHhCCCCCcEEEEE
Confidence 887631 245555544
No 201
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=95.13 E-value=0.054 Score=40.86 Aligned_cols=74 Identities=20% Similarity=0.121 Sum_probs=45.4
Q ss_pred hhcHHHHHHHHHhc-CCceEEEEEeeccHHHHHHccCC--------cCceEEEEeccCCcCcc--cc-cccCCcEEEEec
Q 026476 102 FEEAKPVIQALKSK-GITAIGAAGFCWGAKVVVQLGKR--------EFIQAAVLLHPSFVTVD--DI-KGVEVPLSILGA 169 (238)
Q Consensus 102 ~~d~~~~~~~l~~~-~~~~i~l~G~S~GG~~a~~~a~~--------~~i~a~i~~~~~~~~~~--~~-~~~~~P~L~i~g 169 (238)
..++...++....+ +..+|.|+|+|+|+.++..++.. .+|.+++++.-+..... .+ ....-.++-++-
T Consensus 64 ~~~~~~~i~~~~~~CP~~kivl~GYSQGA~V~~~~~~~~~l~~~~~~~I~avvlfGdP~~~~~~~~~~~~~~~~~~~~C~ 143 (179)
T PF01083_consen 64 VANLVRLIEEYAARCPNTKIVLAGYSQGAMVVGDALSGDGLPPDVADRIAAVVLFGDPRRGAGQPGIPGDYSDRVRSYCN 143 (179)
T ss_dssp HHHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHTTSSHHHHHHEEEEEEES-TTTBTTTTTBTCSCGGGEEEE-B
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEecccccHHHHHHHHhccCChhhhhhEEEEEEecCCcccCCccccCcccccceeEEcC
Confidence 34555555544444 45699999999999999997643 26888888764433211 11 123335777777
Q ss_pred CCCCCC
Q 026476 170 EIDRLS 175 (238)
Q Consensus 170 ~~D~~~ 175 (238)
..|.++
T Consensus 144 ~gD~vC 149 (179)
T PF01083_consen 144 PGDPVC 149 (179)
T ss_dssp TT-GGG
T ss_pred CCCccc
Confidence 777765
No 202
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=94.57 E-value=0.05 Score=41.83 Aligned_cols=38 Identities=16% Similarity=0.190 Sum_probs=29.5
Q ss_pred cchhcHHHHHHH-HHhc-CCceEEEEEeeccHHHHHHccC
Q 026476 100 KGFEEAKPVIQA-LKSK-GITAIGAAGFCWGAKVVVQLGK 137 (238)
Q Consensus 100 ~~~~d~~~~~~~-l~~~-~~~~i~l~G~S~GG~~a~~~a~ 137 (238)
-...|+.++.++ |++. ...+|.|+|||+|+.+...+.+
T Consensus 75 ~ay~DV~~AF~~yL~~~n~GRPfILaGHSQGs~~l~~LL~ 114 (207)
T PF11288_consen 75 LAYSDVRAAFDYYLANYNNGRPFILAGHSQGSMHLLRLLK 114 (207)
T ss_pred hhHHHHHHHHHHHHHhcCCCCCEEEEEeChHHHHHHHHHH
Confidence 356788888874 4444 3458999999999999999874
No 203
>PLN02454 triacylglycerol lipase
Probab=94.54 E-value=0.036 Score=47.02 Aligned_cols=36 Identities=17% Similarity=0.147 Sum_probs=25.3
Q ss_pred chhcHHHHHHHHHhc-CCc--eEEEEEeeccHHHHHHcc
Q 026476 101 GFEEAKPVIQALKSK-GIT--AIGAAGFCWGAKVVVQLG 136 (238)
Q Consensus 101 ~~~d~~~~~~~l~~~-~~~--~i~l~G~S~GG~~a~~~a 136 (238)
..+++...++.+.+. ... +|.++|||+||.+|++.|
T Consensus 208 ~r~qvl~~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA 246 (414)
T PLN02454 208 ARSQLLAKIKELLERYKDEKLSIVLTGHSLGASLATLAA 246 (414)
T ss_pred HHHHHHHHHHHHHHhCCCCCceEEEEecCHHHHHHHHHH
Confidence 344555555555444 222 599999999999999977
No 204
>PLN02310 triacylglycerol lipase
Probab=94.26 E-value=0.031 Score=47.28 Aligned_cols=61 Identities=10% Similarity=0.071 Sum_probs=36.6
Q ss_pred ceEEEEEeeccHHHHHHccC-----CcC-ceEEEEeccCCcCccc----ccccCCcEEEEecCCCCC--CCHH
Q 026476 118 TAIGAAGFCWGAKVVVQLGK-----REF-IQAAVLLHPSFVTVDD----IKGVEVPLSILGAEIDRL--SPPA 178 (238)
Q Consensus 118 ~~i~l~G~S~GG~~a~~~a~-----~~~-i~a~i~~~~~~~~~~~----~~~~~~P~L~i~g~~D~~--~p~~ 178 (238)
.+|.++|||+||.+|++.|. .+. .-.++.+.++...... +......++=+.-..|.+ +|+.
T Consensus 209 ~sI~vTGHSLGGALAtLaA~dl~~~~~~~~v~vyTFGsPRVGN~~Fa~~~~~~~~~~~RVvn~~DiVP~lPp~ 281 (405)
T PLN02310 209 VSLTVTGHSLGGALALLNAYEAATTIPDLFVSVISFGAPRVGNIAFKEKLNELGVKTLRVVVKQDKVPKLPGL 281 (405)
T ss_pred ceEEEEcccHHHHHHHHHHHHHHHhCcCcceeEEEecCCCcccHHHHHHHHhcCCCEEEEEECCCccCccCcc
Confidence 48999999999999999762 122 1235566555554332 222334455555557754 5653
No 205
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=94.21 E-value=0.096 Score=42.01 Aligned_cols=47 Identities=19% Similarity=0.229 Sum_probs=34.2
Q ss_pred CcchhcHHHHHHHHHhc-CCceEEEEEeeccHHHHHHccCCcCceEEE
Q 026476 99 DKGFEEAKPVIQALKSK-GITAIGAAGFCWGAKVVVQLGKREFIQAAV 145 (238)
Q Consensus 99 ~~~~~d~~~~~~~l~~~-~~~~i~l~G~S~GG~~a~~~a~~~~i~a~i 145 (238)
++...++.+++..+++. +..+|.+.|||+||.+|.++...-.+-.+.
T Consensus 256 dryySa~ldI~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~fglP~Va 303 (425)
T KOG4540|consen 256 DRYYSAALDILGAVRRIYPDARIWLTGHSLGGAIASLLGIRFGLPVVA 303 (425)
T ss_pred cchhHHHHHHHHHHHHhCCCceEEEeccccchHHHHHhccccCCceEE
Confidence 34556666666666666 567999999999999999998544444443
No 206
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=94.21 E-value=0.096 Score=42.01 Aligned_cols=47 Identities=19% Similarity=0.229 Sum_probs=34.2
Q ss_pred CcchhcHHHHHHHHHhc-CCceEEEEEeeccHHHHHHccCCcCceEEE
Q 026476 99 DKGFEEAKPVIQALKSK-GITAIGAAGFCWGAKVVVQLGKREFIQAAV 145 (238)
Q Consensus 99 ~~~~~d~~~~~~~l~~~-~~~~i~l~G~S~GG~~a~~~a~~~~i~a~i 145 (238)
++...++.+++..+++. +..+|.+.|||+||.+|.++...-.+-.+.
T Consensus 256 dryySa~ldI~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~fglP~Va 303 (425)
T COG5153 256 DRYYSAALDILGAVRRIYPDARIWLTGHSLGGAIASLLGIRFGLPVVA 303 (425)
T ss_pred cchhHHHHHHHHHHHHhCCCceEEEeccccchHHHHHhccccCCceEE
Confidence 34556666666666666 567999999999999999998544444443
No 207
>PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase. This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid.
Probab=94.01 E-value=0.15 Score=38.61 Aligned_cols=86 Identities=16% Similarity=0.100 Sum_probs=59.7
Q ss_pred ceEEEEeccCCcCcccccccCCcEEEEecCCCCCCCHHhHHHHHHHHhhcCCCCceEEEcCCCCe-eeeecCCCCCHHHH
Q 026476 141 IQAAVLLHPSFVTVDDIKGVEVPLSILGAEIDRLSPPALVKEFEEALNAKSGVDSFVKIFPKVAH-GWTVRYNVEDETAV 219 (238)
Q Consensus 141 i~a~i~~~~~~~~~~~~~~~~~P~L~i~g~~D~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~H-~~~~~~~~~~~~~~ 219 (238)
.++-....|....+..+ -++++|-|-|+.|.+..+.+.....+.+..-+......++.+|++| |+++...
T Consensus 116 ~~G~~~~~Gr~Vdp~aI--~~taLlTVEGe~DDIsg~GQT~AA~~LC~glp~~~k~~~~~~g~GHYGlF~G~r------- 186 (202)
T PF06850_consen 116 PRGTWTVRGRPVDPAAI--RRTALLTVEGERDDISGPGQTHAAHDLCTGLPADMKRHHLQPGVGHYGLFNGSR------- 186 (202)
T ss_pred cCCceEECCEEcchHHc--ccceeEEeecCcccCCcchHHHHHHHHhcCCCHHHhhhcccCCCCeeecccchh-------
Confidence 44555555665555544 2457888999999999999998888877433333555677889999 4444322
Q ss_pred HHHHHHHHHHHHHHHHh
Q 026476 220 KAAEEAHHNLLEWFAKY 236 (238)
Q Consensus 220 ~~~~~~~~~~~~fl~~~ 236 (238)
..++.+..+.+|+.++
T Consensus 187 -wr~~I~P~i~~fi~~~ 202 (202)
T PF06850_consen 187 -WREEIYPRIREFIRQH 202 (202)
T ss_pred -hhhhhhHHHHHHHHhC
Confidence 4577888899998764
No 208
>COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism]
Probab=93.96 E-value=0.86 Score=36.92 Aligned_cols=68 Identities=19% Similarity=0.162 Sum_probs=47.0
Q ss_pred CCcEEEEecCCCCCCCHHhHHHHHHHHhhcCCCCceEEEcCCCCe-eeeecCCCCCHHHHHHHHHHHHHHHHHHHHh
Q 026476 161 EVPLSILGAEIDRLSPPALVKEFEEALNAKSGVDSFVKIFPKVAH-GWTVRYNVEDETAVKAAEEAHHNLLEWFAKY 236 (238)
Q Consensus 161 ~~P~L~i~g~~D~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~H-~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~ 236 (238)
++-++-+-|++|.+.-..+.++..+.+..-+........-+++|| |.++... -.++...++.+|+.++
T Consensus 339 ~~aL~tvEGEnDDIsgvGQTkAA~~LC~nIpe~mk~hy~qp~vGHYGVFnGsr--------fr~eIvPri~dFI~~~ 407 (415)
T COG4553 339 NVALFTVEGENDDISGVGQTKAAHDLCSNIPEDMKQHYMQPDVGHYGVFNGSR--------FREEIVPRIRDFIRRY 407 (415)
T ss_pred ceeEEEeecccccccccchhHHHHHHHhcChHHHHHHhcCCCCCccceeccch--------HHHHHHHHHHHHHHHh
Confidence 356788999999998777777777766322222344566788999 4444332 3467888899998875
No 209
>PLN03037 lipase class 3 family protein; Provisional
Probab=93.87 E-value=0.039 Score=47.98 Aligned_cols=78 Identities=14% Similarity=0.162 Sum_probs=44.6
Q ss_pred hhcHHHHHHHHHhcC-CceEEEEEeeccHHHHHHccC-----CcC--ceEEEEeccCCcCccc----ccccCCcEEEEec
Q 026476 102 FEEAKPVIQALKSKG-ITAIGAAGFCWGAKVVVQLGK-----REF--IQAAVLLHPSFVTVDD----IKGVEVPLSILGA 169 (238)
Q Consensus 102 ~~d~~~~~~~l~~~~-~~~i~l~G~S~GG~~a~~~a~-----~~~--i~a~i~~~~~~~~~~~----~~~~~~P~L~i~g 169 (238)
.+++..+++..+..+ ..+|.+.|||+||.+|++.|. .+. .-.++.+.++...... +......++=|.-
T Consensus 301 l~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~DIa~~~p~~~~VtvyTFGsPRVGN~aFA~~~~~l~~~~lRVVN 380 (525)
T PLN03037 301 MEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYEAARSVPALSNISVISFGAPRVGNLAFKEKLNELGVKVLRVVN 380 (525)
T ss_pred HHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHHHHHhCCCCCCeeEEEecCCCccCHHHHHHHHhcCCCEEEEEE
Confidence 344444444443322 347999999999999999762 122 2234555555444332 2233456666666
Q ss_pred CCCCC--CCHHh
Q 026476 170 EIDRL--SPPAL 179 (238)
Q Consensus 170 ~~D~~--~p~~~ 179 (238)
..|.+ +|+..
T Consensus 381 ~~DiVP~lPp~~ 392 (525)
T PLN03037 381 KQDIVPKLPGII 392 (525)
T ss_pred CCCccccCCchh
Confidence 68865 66643
No 210
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=93.86 E-value=0.13 Score=44.17 Aligned_cols=86 Identities=17% Similarity=0.230 Sum_probs=54.6
Q ss_pred hHHHHHHHHHHCCCE----E--EeccCCCCCccCCCCCcchHhhHhhcCCCcchhcHHHHHHHHHhc-CCceEEEEEeec
Q 026476 55 NLRKLADKVAAAGFY----V--AVPDFFHGDPYVADGGKPLQEWIKDHGVDKGFEEAKPVIQALKSK-GITAIGAAGFCW 127 (238)
Q Consensus 55 ~~~~~a~~l~~~G~~----v--~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~-~~~~i~l~G~S~ 127 (238)
.++.+.+.|+.-||. + ..+|+ +.+... ....++....++..++..-+. +.+||.+++|||
T Consensus 125 ~w~~~i~~lv~~GYe~~~~l~ga~YDw--Rls~~~-----------~e~rd~yl~kLK~~iE~~~~~~G~kkVvlisHSM 191 (473)
T KOG2369|consen 125 YWHELIENLVGIGYERGKTLFGAPYDW--RLSYHN-----------SEERDQYLSKLKKKIETMYKLNGGKKVVLISHSM 191 (473)
T ss_pred HHHHHHHHHHhhCcccCceeeccccch--hhccCC-----------hhHHHHHHHHHHHHHHHHHHHcCCCceEEEecCC
Confidence 457788888888876 2 23333 221111 111234556677777766555 458999999999
Q ss_pred cHHHHHHccC-Cc---------CceEEEEeccCCcC
Q 026476 128 GAKVVVQLGK-RE---------FIQAAVLLHPSFVT 153 (238)
Q Consensus 128 GG~~a~~~a~-~~---------~i~a~i~~~~~~~~ 153 (238)
|+.+.+.... .+ -|++.+.+.+.+..
T Consensus 192 G~l~~lyFl~w~~~~~~~W~~k~I~sfvnig~p~lG 227 (473)
T KOG2369|consen 192 GGLYVLYFLKWVEAEGPAWCDKYIKSFVNIGAPWLG 227 (473)
T ss_pred ccHHHHHHHhcccccchhHHHHHHHHHHccCchhcC
Confidence 9999998652 21 36677777666553
No 211
>PLN00413 triacylglycerol lipase
Probab=93.05 E-value=0.11 Score=44.69 Aligned_cols=40 Identities=10% Similarity=0.129 Sum_probs=28.5
Q ss_pred CCceEEEEEeeccHHHHHHccC----C------cCceEEEEeccCCcCcc
Q 026476 116 GITAIGAAGFCWGAKVVVQLGK----R------EFIQAAVLLHPSFVTVD 155 (238)
Q Consensus 116 ~~~~i~l~G~S~GG~~a~~~a~----~------~~i~a~i~~~~~~~~~~ 155 (238)
+..+|.+.|||+||.+|.+.+. . .++..++.+.++.....
T Consensus 282 p~~kliVTGHSLGGALAtLaA~~L~~~~~~~~~~ri~~VYTFG~PRVGN~ 331 (479)
T PLN00413 282 PTSKFILSGHSLGGALAILFTAVLIMHDEEEMLERLEGVYTFGQPRVGDE 331 (479)
T ss_pred CCCeEEEEecCHHHHHHHHHHHHHHhccchhhccccceEEEeCCCCCccH
Confidence 5668999999999999999762 1 13446667766665443
No 212
>PLN02408 phospholipase A1
Probab=92.80 E-value=0.12 Score=43.35 Aligned_cols=57 Identities=9% Similarity=0.049 Sum_probs=33.2
Q ss_pred ceEEEEEeeccHHHHHHccCC-----c--CceEEEEeccCCcCccc----ccccCCcEEEEecCCCCC
Q 026476 118 TAIGAAGFCWGAKVVVQLGKR-----E--FIQAAVLLHPSFVTVDD----IKGVEVPLSILGAEIDRL 174 (238)
Q Consensus 118 ~~i~l~G~S~GG~~a~~~a~~-----~--~i~a~i~~~~~~~~~~~----~~~~~~P~L~i~g~~D~~ 174 (238)
.+|.+.|||+||.+|.+.|.. + ..-.++.+.++...... +......++=|.-..|.+
T Consensus 200 ~sI~vTGHSLGGALAtLaA~dl~~~~~~~~~V~v~tFGsPRVGN~~Fa~~~~~~~~~~lRVvN~~D~V 267 (365)
T PLN02408 200 LSLTITGHSLGAALATLTAYDIKTTFKRAPMVTVISFGGPRVGNRSFRRQLEKQGTKVLRIVNSDDVI 267 (365)
T ss_pred ceEEEeccchHHHHHHHHHHHHHHhcCCCCceEEEEcCCCCcccHHHHHHHHhcCCcEEEEEeCCCCc
Confidence 369999999999999997621 1 12335666655554322 222233445444446653
No 213
>PLN02571 triacylglycerol lipase
Probab=92.74 E-value=0.11 Score=44.13 Aligned_cols=18 Identities=22% Similarity=0.298 Sum_probs=16.8
Q ss_pred eEEEEEeeccHHHHHHcc
Q 026476 119 AIGAAGFCWGAKVVVQLG 136 (238)
Q Consensus 119 ~i~l~G~S~GG~~a~~~a 136 (238)
+|.++|||+||.+|.+.|
T Consensus 227 sI~VTGHSLGGALAtLaA 244 (413)
T PLN02571 227 SITICGHSLGAALATLNA 244 (413)
T ss_pred cEEEeccchHHHHHHHHH
Confidence 799999999999999976
No 214
>PLN02162 triacylglycerol lipase
Probab=92.67 E-value=0.13 Score=44.34 Aligned_cols=40 Identities=8% Similarity=0.027 Sum_probs=28.3
Q ss_pred CCceEEEEEeeccHHHHHHccC------Cc----CceEEEEeccCCcCcc
Q 026476 116 GITAIGAAGFCWGAKVVVQLGK------RE----FIQAAVLLHPSFVTVD 155 (238)
Q Consensus 116 ~~~~i~l~G~S~GG~~a~~~a~------~~----~i~a~i~~~~~~~~~~ 155 (238)
+..++.+.|||+||.+|.+.+. .. .+..++.+..+.....
T Consensus 276 p~~kliVTGHSLGGALAtLaAa~L~~~~~~~l~~~~~~vYTFGqPRVGn~ 325 (475)
T PLN02162 276 KNLKYILTGHSLGGALAALFPAILAIHGEDELLDKLEGIYTFGQPRVGDE 325 (475)
T ss_pred CCceEEEEecChHHHHHHHHHHHHHHccccccccccceEEEeCCCCccCH
Confidence 4569999999999999998642 11 2445677766666544
No 215
>KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=92.48 E-value=0.28 Score=41.31 Aligned_cols=87 Identities=16% Similarity=0.160 Sum_probs=44.4
Q ss_pred CCeeEEEEeccCCCCCchHHHHHHHHHHC--CCEEEeccCCCCCccCCCCCcchHhhHhhcCCCcchhcHHHHHHHHHhc
Q 026476 38 SKLAVLLISDVYGYEAPNLRKLADKVAAA--GFYVAVPDFFHGDPYVADGGKPLQEWIKDHGVDKGFEEAKPVIQALKSK 115 (238)
Q Consensus 38 ~~~~vl~~hg~~g~~~~~~~~~a~~l~~~--G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~ 115 (238)
+...||+.||..|.....++..+...... +...+.-.. .+.-.....+ -.++. . +....+++.+...
T Consensus 79 ~~HLvVlthGi~~~~~~~~~~~~~~~~kk~p~~~iv~~g~-~~~~~~T~~G---v~~lG----~---Rla~~~~e~~~~~ 147 (405)
T KOG4372|consen 79 PKHLVVLTHGLHGADMEYWKEKIEQMTKKMPDKLIVVRGK-MNNMCQTFDG---VDVLG----E---RLAEEVKETLYDY 147 (405)
T ss_pred CceEEEeccccccccHHHHHHHHHhhhcCCCcceEeeecc-ccchhhcccc---ceeee----c---ccHHHHhhhhhcc
Confidence 34578999999883234555555655554 332222222 2221111000 01111 1 1222233333332
Q ss_pred CCceEEEEEeeccHHHHHHc
Q 026476 116 GITAIGAAGFCWGAKVVVQL 135 (238)
Q Consensus 116 ~~~~i~l~G~S~GG~~a~~~ 135 (238)
..++|..+|||+||.++..+
T Consensus 148 si~kISfvghSLGGLvar~A 167 (405)
T KOG4372|consen 148 SIEKISFVGHSLGGLVARYA 167 (405)
T ss_pred ccceeeeeeeecCCeeeeEE
Confidence 36899999999999887764
No 216
>PLN02934 triacylglycerol lipase
Probab=92.34 E-value=0.16 Score=44.26 Aligned_cols=52 Identities=6% Similarity=0.096 Sum_probs=32.0
Q ss_pred HHHHHHHHHhc-CCceEEEEEeeccHHHHHHccCC----------cCceEEEEeccCCcCccc
Q 026476 105 AKPVIQALKSK-GITAIGAAGFCWGAKVVVQLGKR----------EFIQAAVLLHPSFVTVDD 156 (238)
Q Consensus 105 ~~~~~~~l~~~-~~~~i~l~G~S~GG~~a~~~a~~----------~~i~a~i~~~~~~~~~~~ 156 (238)
+...++.+.++ +..+|.+.|||+||.+|.+.+.. +.+..++.+..+......
T Consensus 307 v~~~lk~ll~~~p~~kIvVTGHSLGGALAtLaA~~L~l~~~~~~l~~~~~vYTFGsPRVGN~~ 369 (515)
T PLN02934 307 VRSKLKSLLKEHKNAKFVVTGHSLGGALAILFPTVLVLQEETEVMKRLLGVYTFGQPRIGNRQ 369 (515)
T ss_pred HHHHHHHHHHHCCCCeEEEeccccHHHHHHHHHHHHHHhcccccccCceEEEEeCCCCccCHH
Confidence 33444333333 55699999999999999997621 122345666666555443
No 217
>PLN02324 triacylglycerol lipase
Probab=92.04 E-value=0.15 Score=43.31 Aligned_cols=19 Identities=26% Similarity=0.277 Sum_probs=17.2
Q ss_pred ceEEEEEeeccHHHHHHcc
Q 026476 118 TAIGAAGFCWGAKVVVQLG 136 (238)
Q Consensus 118 ~~i~l~G~S~GG~~a~~~a 136 (238)
.+|.+.|||+||.+|.+.|
T Consensus 215 ~sItvTGHSLGGALAtLaA 233 (415)
T PLN02324 215 ISITFTGHSLGAVMSVLSA 233 (415)
T ss_pred ceEEEecCcHHHHHHHHHH
Confidence 3799999999999999976
No 218
>PLN02719 triacylglycerol lipase
Probab=91.82 E-value=0.17 Score=44.06 Aligned_cols=19 Identities=21% Similarity=0.319 Sum_probs=17.4
Q ss_pred ceEEEEEeeccHHHHHHcc
Q 026476 118 TAIGAAGFCWGAKVVVQLG 136 (238)
Q Consensus 118 ~~i~l~G~S~GG~~a~~~a 136 (238)
.+|.+.|||+||.+|.+.|
T Consensus 298 ~sItVTGHSLGGALAtLaA 316 (518)
T PLN02719 298 LSITVTGHSLGGALAVLSA 316 (518)
T ss_pred ceEEEecCcHHHHHHHHHH
Confidence 4899999999999999966
No 219
>PLN02847 triacylglycerol lipase
Probab=91.77 E-value=0.46 Score=42.24 Aligned_cols=70 Identities=16% Similarity=0.170 Sum_probs=38.2
Q ss_pred CCceEEEEEeeccHHHHHHcc---C-Cc---CceEEEEeccCCcCcccccccCCc--EEEEecCCCCC--CCHHhHHHHH
Q 026476 116 GITAIGAAGFCWGAKVVVQLG---K-RE---FIQAAVLLHPSFVTVDDIKGVEVP--LSILGAEIDRL--SPPALVKEFE 184 (238)
Q Consensus 116 ~~~~i~l~G~S~GG~~a~~~a---~-~~---~i~a~i~~~~~~~~~~~~~~~~~P--~L~i~g~~D~~--~p~~~~~~~~ 184 (238)
+.-+|.++|||+||.+|.+++ + .+ .+. ++.+.|+..-...+.....+ +-++++ +|.+ ++...+++|.
T Consensus 249 PdYkLVITGHSLGGGVAALLAilLRe~~~fssi~-CyAFgPp~cvS~eLAe~~k~fVTSVVng-~DIVPRLS~~Sl~dLR 326 (633)
T PLN02847 249 PDFKIKIVGHSLGGGTAALLTYILREQKEFSSTT-CVTFAPAACMTWDLAESGKHFITTIING-SDLVPTFSAASVDDLR 326 (633)
T ss_pred CCCeEEEeccChHHHHHHHHHHHHhcCCCCCCce-EEEecCchhcCHHHHHHhhhheEEEEeC-CCCCccCCHHHHHHHH
Confidence 445999999999999999876 2 22 232 34444432212222222222 345666 5633 4455566665
Q ss_pred HHH
Q 026476 185 EAL 187 (238)
Q Consensus 185 ~~~ 187 (238)
..+
T Consensus 327 ~EV 329 (633)
T PLN02847 327 SEV 329 (633)
T ss_pred HHH
Confidence 544
No 220
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=91.44 E-value=0.78 Score=40.23 Aligned_cols=123 Identities=15% Similarity=0.087 Sum_probs=66.0
Q ss_pred HHHHCCCEEEeccCCCCCccCCC--C--CcchHhhHhhcCCCcchhcHHHHHHHHHh----cCCceEEEEEeeccHHHHH
Q 026476 62 KVAAAGFYVAVPDFFHGDPYVAD--G--GKPLQEWIKDHGVDKGFEEAKPVIQALKS----KGITAIGAAGFCWGAKVVV 133 (238)
Q Consensus 62 ~l~~~G~~v~~~d~~~g~~~~~~--~--~~~~~~~~~~~~~~~~~~d~~~~~~~l~~----~~~~~i~l~G~S~GG~~a~ 133 (238)
.-.++||+++.=|. ||..... . .....+.+..+.. +.+.++..+-+.+-+ +.+.+-...|.|-||.-++
T Consensus 54 ~~~~~G~A~~~TD~--Gh~~~~~~~~~~~~~n~~~~~dfa~-ra~h~~~~~aK~l~~~~Yg~~p~~sY~~GcS~GGRqgl 130 (474)
T PF07519_consen 54 TALARGYATASTDS--GHQGSAGSDDASFGNNPEALLDFAY-RALHETTVVAKALIEAFYGKAPKYSYFSGCSTGGRQGL 130 (474)
T ss_pred hhhhcCeEEEEecC--CCCCCcccccccccCCHHHHHHHHh-hHHHHHHHHHHHHHHHHhCCCCCceEEEEeCCCcchHH
Confidence 34467999999995 7754432 1 1111111111111 112222222222222 2577899999999999999
Q ss_pred Hcc-CCc-CceEEEEeccCCcCcccccccCCcEEEEecCCCCCCCHHhHHHHHHHH
Q 026476 134 QLG-KRE-FIQAAVLLHPSFVTVDDIKGVEVPLSILGAEIDRLSPPALVKEFEEAL 187 (238)
Q Consensus 134 ~~a-~~~-~i~a~i~~~~~~~~~~~~~~~~~P~L~i~g~~D~~~p~~~~~~~~~~~ 187 (238)
..| +.| ..+++++..|............-+...+.......+++...+.+.+++
T Consensus 131 ~~AQryP~dfDGIlAgaPA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~av 186 (474)
T PF07519_consen 131 MAAQRYPEDFDGILAGAPAINWTHLQLAHAWPAQVMYPDPGGYLSPCKLDLIHAAV 186 (474)
T ss_pred HHHHhChhhcCeEEeCCchHHHHHHHHHhhhhhhhhccCCCCCCCHHHHHHHHHHH
Confidence 988 556 789999887765432211111112233333235566666666665554
No 221
>PLN02753 triacylglycerol lipase
Probab=91.29 E-value=0.21 Score=43.67 Aligned_cols=19 Identities=16% Similarity=0.314 Sum_probs=17.7
Q ss_pred ceEEEEEeeccHHHHHHcc
Q 026476 118 TAIGAAGFCWGAKVVVQLG 136 (238)
Q Consensus 118 ~~i~l~G~S~GG~~a~~~a 136 (238)
.+|.+.|||+||.+|.+.|
T Consensus 312 ~sItVTGHSLGGALAtLaA 330 (531)
T PLN02753 312 LSITVTGHSLGGALAILSA 330 (531)
T ss_pred ceEEEEccCHHHHHHHHHH
Confidence 5999999999999999976
No 222
>PF03283 PAE: Pectinacetylesterase
Probab=91.27 E-value=1.8 Score=36.61 Aligned_cols=35 Identities=14% Similarity=0.174 Sum_probs=28.3
Q ss_pred hhcHHHHHHHHHhc---CCceEEEEEeeccHHHHHHcc
Q 026476 102 FEEAKPVIQALKSK---GITAIGAAGFCWGAKVVVQLG 136 (238)
Q Consensus 102 ~~d~~~~~~~l~~~---~~~~i~l~G~S~GG~~a~~~a 136 (238)
..-++++++++.+. ..++|.|.|.|.||.-++.-+
T Consensus 137 ~~i~~avl~~l~~~gl~~a~~vlltG~SAGG~g~~~~~ 174 (361)
T PF03283_consen 137 YRILRAVLDDLLSNGLPNAKQVLLTGCSAGGLGAILHA 174 (361)
T ss_pred HHHHHHHHHHHHHhcCcccceEEEeccChHHHHHHHHH
Confidence 44577888888765 468999999999999999854
No 223
>PLN02802 triacylglycerol lipase
Probab=91.23 E-value=0.22 Score=43.38 Aligned_cols=19 Identities=21% Similarity=0.392 Sum_probs=17.3
Q ss_pred ceEEEEEeeccHHHHHHcc
Q 026476 118 TAIGAAGFCWGAKVVVQLG 136 (238)
Q Consensus 118 ~~i~l~G~S~GG~~a~~~a 136 (238)
.+|.+.|||+||.+|.+.|
T Consensus 330 ~sI~VTGHSLGGALAtLaA 348 (509)
T PLN02802 330 LSITVTGHSLGAALALLVA 348 (509)
T ss_pred ceEEEeccchHHHHHHHHH
Confidence 3799999999999999976
No 224
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=91.13 E-value=0.51 Score=41.36 Aligned_cols=71 Identities=18% Similarity=0.164 Sum_probs=51.3
Q ss_pred ccccCCcEEEEecCCCCCCCHHhHHHHHHHHhhcCCC-------CceEEEcCCCCeeeeecCCCCCHHHHHHHHHHHHHH
Q 026476 157 IKGVEVPLSILGAEIDRLSPPALVKEFEEALNAKSGV-------DSFVKIFPKVAHGWTVRYNVEDETAVKAAEEAHHNL 229 (238)
Q Consensus 157 ~~~~~~P~L~i~g~~D~~~p~~~~~~~~~~~~~~~~~-------~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~ 229 (238)
+.+--..+|+.||..|+++|+....++++.+.+..+. -+++...||++|......... -..+..+
T Consensus 349 F~~~GGKLI~~HG~aD~~I~p~~ti~YY~~V~~~~g~~~~~v~dF~RlF~vPGm~HC~gG~g~~~--------~d~l~aL 420 (474)
T PF07519_consen 349 FRARGGKLILYHGWADPLIPPQGTIDYYERVVARMGGALADVDDFYRLFMVPGMGHCGGGPGPDP--------FDALTAL 420 (474)
T ss_pred HHhcCCeEEEEecCCCCccCCCcHHHHHHHHHHhcccccccccceeEEEecCCCcccCCCCCCCC--------CCHHHHH
Confidence 3344468999999999999999988888888554432 467788999999886543221 2467777
Q ss_pred HHHHHH
Q 026476 230 LEWFAK 235 (238)
Q Consensus 230 ~~fl~~ 235 (238)
.+|..+
T Consensus 421 ~~WVE~ 426 (474)
T PF07519_consen 421 VDWVEN 426 (474)
T ss_pred HHHHhC
Confidence 777754
No 225
>PLN02761 lipase class 3 family protein
Probab=91.06 E-value=0.15 Score=44.52 Aligned_cols=19 Identities=21% Similarity=0.347 Sum_probs=17.3
Q ss_pred ceEEEEEeeccHHHHHHcc
Q 026476 118 TAIGAAGFCWGAKVVVQLG 136 (238)
Q Consensus 118 ~~i~l~G~S~GG~~a~~~a 136 (238)
.+|.+.|||+||.+|.+.|
T Consensus 294 ~sItVTGHSLGGALAtLaA 312 (527)
T PLN02761 294 ISITVTGHSLGASLALVSA 312 (527)
T ss_pred ceEEEeccchHHHHHHHHH
Confidence 4899999999999999866
No 226
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=89.71 E-value=0.35 Score=40.33 Aligned_cols=49 Identities=10% Similarity=-0.024 Sum_probs=31.0
Q ss_pred cHHHHHHHHHhc-CCceEEEEEeeccHHHHHHccC----Cc----CceEEEEeccCCc
Q 026476 104 EAKPVIQALKSK-GITAIGAAGFCWGAKVVVQLGK----RE----FIQAAVLLHPSFV 152 (238)
Q Consensus 104 d~~~~~~~l~~~-~~~~i~l~G~S~GG~~a~~~a~----~~----~i~a~i~~~~~~~ 152 (238)
.+.+.++.+.++ +.-+|.+.|||+||.+|.+.|. +. ....++.+..+..
T Consensus 156 ~~~~~~~~L~~~~~~~~i~vTGHSLGgAlA~laa~~i~~~~~~~~~~v~v~tFG~PRv 213 (336)
T KOG4569|consen 156 GLDAELRRLIELYPNYSIWVTGHSLGGALASLAALDLVKNGLKTSSPVKVYTFGQPRV 213 (336)
T ss_pred HHHHHHHHHHHhcCCcEEEEecCChHHHHHHHHHHHHHHcCCCCCCceEEEEecCCCc
Confidence 444444444443 4459999999999999999773 11 2345555655544
No 227
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=89.52 E-value=3.8 Score=31.73 Aligned_cols=35 Identities=11% Similarity=0.166 Sum_probs=26.1
Q ss_pred CCceEEEEEeeccHHHHHHcc-CCc---CceEEEEeccC
Q 026476 116 GITAIGAAGFCWGAKVVVQLG-KRE---FIQAAVLLHPS 150 (238)
Q Consensus 116 ~~~~i~l~G~S~GG~~a~~~a-~~~---~i~a~i~~~~~ 150 (238)
....+.++.||.||...+.+. +.+ .+.++.+-...
T Consensus 188 ~~~sv~vvahsyGG~~t~~l~~~f~~d~~v~aialTDs~ 226 (297)
T KOG3967|consen 188 KAESVFVVAHSYGGSLTLDLVERFPDDESVFAIALTDSA 226 (297)
T ss_pred CcceEEEEEeccCChhHHHHHHhcCCccceEEEEeeccc
Confidence 467999999999999999977 433 56666554444
No 228
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=86.06 E-value=3.9 Score=35.68 Aligned_cols=86 Identities=13% Similarity=0.028 Sum_probs=56.6
Q ss_pred HHH-CCCEEEeccCC-CCCccCCCCCcchHhhHhhcCCCcchhcHHHHHHHHHhc----CCceEEEEEeeccHHHHHHcc
Q 026476 63 VAA-AGFYVAVPDFF-HGDPYVADGGKPLQEWIKDHGVDKGFEEAKPVIQALKSK----GITAIGAAGFCWGAKVVVQLG 136 (238)
Q Consensus 63 l~~-~G~~v~~~d~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~----~~~~i~l~G~S~GG~~a~~~a 136 (238)
+|+ .|..|+..+++ .|...+... .+. .-++.....+.+.|+..+|+.+..+ +..+...+|-|+-|.++.++=
T Consensus 113 ~AkkfgA~v~~lEHRFYG~S~P~~~-~st-~nlk~LSs~QALaDla~fI~~~n~k~n~~~~~~WitFGgSYsGsLsAW~R 190 (514)
T KOG2182|consen 113 WAKKFGATVFQLEHRFYGQSSPIGD-LST-SNLKYLSSLQALADLAEFIKAMNAKFNFSDDSKWITFGGSYSGSLSAWFR 190 (514)
T ss_pred HHHHhCCeeEEeeeeccccCCCCCC-Ccc-cchhhhhHHHHHHHHHHHHHHHHhhcCCCCCCCeEEECCCchhHHHHHHH
Confidence 444 48999999983 454433332 111 1234445578889999999988776 234889999999999999865
Q ss_pred -CCc-CceEEEEeccC
Q 026476 137 -KRE-FIQAAVLLHPS 150 (238)
Q Consensus 137 -~~~-~i~a~i~~~~~ 150 (238)
..| .+.++++-+++
T Consensus 191 ~~yPel~~GsvASSap 206 (514)
T KOG2182|consen 191 EKYPELTVGSVASSAP 206 (514)
T ss_pred HhCchhheeecccccc
Confidence 455 45555544443
No 229
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=83.99 E-value=3.1 Score=34.82 Aligned_cols=60 Identities=20% Similarity=0.243 Sum_probs=40.8
Q ss_pred CCceEEEEEeeccHHHHHHcc----CC---cCceEEEEeccCCcCc-cccc----ccCCcEEEEecCCCCCC
Q 026476 116 GITAIGAAGFCWGAKVVVQLG----KR---EFIQAAVLLHPSFVTV-DDIK----GVEVPLSILGAEIDRLS 175 (238)
Q Consensus 116 ~~~~i~l~G~S~GG~~a~~~a----~~---~~i~a~i~~~~~~~~~-~~~~----~~~~P~L~i~g~~D~~~ 175 (238)
+..+|.++|||+|+.+..... .+ ..|..++++.++.... ..+. -+...+.-+++++|.+.
T Consensus 218 G~RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gapv~~~~~~W~~~r~vVsGr~vN~YS~~D~vL 289 (345)
T PF05277_consen 218 GERPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAPVPSDPEEWRKIRSVVSGRLVNVYSENDWVL 289 (345)
T ss_pred CCCceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCCCCCCHHHHHHHHHHccCeEEEEecCcHHHH
Confidence 445799999999999988743 22 2467778776554433 2222 24668888899888753
No 230
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=83.74 E-value=7.4 Score=31.54 Aligned_cols=36 Identities=17% Similarity=0.058 Sum_probs=27.3
Q ss_pred chhcHHHHHHHHHhc--CCceEEEEEeeccHHHHHHcc
Q 026476 101 GFEEAKPVIQALKSK--GITAIGAAGFCWGAKVVVQLG 136 (238)
Q Consensus 101 ~~~d~~~~~~~l~~~--~~~~i~l~G~S~GG~~a~~~a 136 (238)
....+..++.++.+. +.++|.++|||-|+.+|-.++
T Consensus 73 ~~~~I~~ay~~l~~~~~~gd~I~lfGFSRGA~~AR~~a 110 (277)
T PF09994_consen 73 IEARIRDAYRFLSKNYEPGDRIYLFGFSRGAYTARAFA 110 (277)
T ss_pred hHHHHHHHHHHHHhccCCcceEEEEecCccHHHHHHHH
Confidence 445566667666443 567999999999999998765
No 231
>PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B.
Probab=81.21 E-value=2.8 Score=25.61 Aligned_cols=15 Identities=27% Similarity=0.220 Sum_probs=7.1
Q ss_pred CCeeEEEEeccCCCC
Q 026476 38 SKLAVLLISDVYGYE 52 (238)
Q Consensus 38 ~~~~vl~~hg~~g~~ 52 (238)
++|+|++.||..++.
T Consensus 42 ~k~pVll~HGL~~ss 56 (63)
T PF04083_consen 42 KKPPVLLQHGLLQSS 56 (63)
T ss_dssp T--EEEEE--TT--G
T ss_pred CCCcEEEECCcccCh
Confidence 458899999988764
No 232
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=80.80 E-value=3.3 Score=36.95 Aligned_cols=35 Identities=14% Similarity=0.158 Sum_probs=25.0
Q ss_pred hhcHHHHHHHHHhc---CCceEEEEEeeccHHHHHHcc
Q 026476 102 FEEAKPVIQALKSK---GITAIGAAGFCWGAKVVVQLG 136 (238)
Q Consensus 102 ~~d~~~~~~~l~~~---~~~~i~l~G~S~GG~~a~~~a 136 (238)
......+++.++.. +..+|..+||||||.++=.+.
T Consensus 507 ~~Rs~~lleql~~~~VG~~RPivwI~HSmGGLl~K~lL 544 (697)
T KOG2029|consen 507 AARSNELLEQLQAAGVGDDRPIVWIGHSMGGLLAKKLL 544 (697)
T ss_pred HHHHHHHHHHHHHhccCCCCceEEEecccchHHHHHHH
Confidence 33455666666655 256899999999999887643
No 233
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=80.38 E-value=2.5 Score=33.16 Aligned_cols=21 Identities=19% Similarity=0.158 Sum_probs=18.3
Q ss_pred CCceEEEEEeeccHHHHHHcc
Q 026476 116 GITAIGAAGFCWGAKVVVQLG 136 (238)
Q Consensus 116 ~~~~i~l~G~S~GG~~a~~~a 136 (238)
..+++.++|+|+|+.++...+
T Consensus 46 ~~~~vvV~GySQGA~Va~~~~ 66 (225)
T PF08237_consen 46 AGGPVVVFGYSQGAVVASNVL 66 (225)
T ss_pred CCCCEEEEEECHHHHHHHHHH
Confidence 467899999999999998855
No 234
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=79.88 E-value=42 Score=29.56 Aligned_cols=107 Identities=10% Similarity=-0.056 Sum_probs=54.6
Q ss_pred EEEecCCC-CCeeEEEEeccCCCCCchHHHHHHHHHHCCCEEEeccCCCCCccCCCCCcchHhhHhhcCCCcchhcHHHH
Q 026476 30 AYVTGSPD-SKLAVLLISDVYGYEAPNLRKLADKVAAAGFYVAVPDFFHGDPYVADGGKPLQEWIKDHGVDKGFEEAKPV 108 (238)
Q Consensus 30 ~~~~~p~~-~~~~vl~~hg~~g~~~~~~~~~a~~l~~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 108 (238)
.|+..|.. +.|..|.+.|.... ..+. ---.+.+.|.--+.+.-+|=.|...--+. .++ .....+-+...
T Consensus 279 ~yYFnPGD~KPPL~VYFSGyR~a--EGFE-gy~MMk~Lg~PfLL~~DpRleGGaFYlGs--~ey-----E~~I~~~I~~~ 348 (511)
T TIGR03712 279 IYYFNPGDFKPPLNVYFSGYRPA--EGFE-GYFMMKRLGAPFLLIGDPRLEGGAFYLGS--DEY-----EQGIINVIQEK 348 (511)
T ss_pred EEecCCcCCCCCeEEeeccCccc--Ccch-hHHHHHhcCCCeEEeeccccccceeeeCc--HHH-----HHHHHHHHHHH
Confidence 45556765 34556778775442 1221 11224455766665544232232210000 000 01122233333
Q ss_pred HHHHHhcCCceEEEEEeeccHHHHHHccCCcCceEEEEe
Q 026476 109 IQALKSKGITAIGAAGFCWGAKVVVQLGKREFIQAAVLL 147 (238)
Q Consensus 109 ~~~l~~~~~~~i~l~G~S~GG~~a~~~a~~~~i~a~i~~ 147 (238)
+++|.- +.+.+.+-|.|||..-|+.+++.=...|+|+.
T Consensus 349 L~~LgF-~~~qLILSGlSMGTfgAlYYga~l~P~AIiVg 386 (511)
T TIGR03712 349 LDYLGF-DHDQLILSGLSMGTFGALYYGAKLSPHAIIVG 386 (511)
T ss_pred HHHhCC-CHHHeeeccccccchhhhhhcccCCCceEEEc
Confidence 333321 35689999999999999999876555666553
No 235
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=77.71 E-value=1.8 Score=30.55 Aligned_cols=43 Identities=16% Similarity=0.188 Sum_probs=28.7
Q ss_pred CeeEEEecCCCCCeeEEEEeccCCCCCchH-HHHHHHHHHCCCE
Q 026476 27 GLNAYVTGSPDSKLAVLLISDVYGYEAPNL-RKLADKVAAAGFY 69 (238)
Q Consensus 27 ~~~~~~~~p~~~~~~vl~~hg~~g~~~~~~-~~~a~~l~~~G~~ 69 (238)
.+..++..+...+|.|+-+||+.|...... +-+|+.|...|..
T Consensus 40 ai~~~l~~~~p~KpLVlSfHG~tGtGKn~v~~liA~~ly~~G~~ 83 (127)
T PF06309_consen 40 AIKGHLANPNPRKPLVLSFHGWTGTGKNFVSRLIAEHLYKSGMK 83 (127)
T ss_pred HHHHHHcCCCCCCCEEEEeecCCCCcHHHHHHHHHHHHHhcccC
Confidence 366777666556688888999998754333 3466666666643
No 236
>PF10605 3HBOH: 3HB-oligomer hydrolase (3HBOH) ; InterPro: IPR016582 This entry represents a group of predicted D-(-)-3-hydroxybutyrate oligomer hydrolases (also known as 3HB-oligomer hydrolase), which function in the degradation of poly-3-hydroxybutyrate (PHB). These enzymes catalyse the hydrolysis of D(-)-3-hydroxybutyrate oligomers (3HB-oligomers) into 3HB-monomers [, ].; GO: 0047989 hydroxybutyrate-dimer hydrolase activity, 0019605 butyrate metabolic process, 0005615 extracellular space
Probab=72.51 E-value=8.6 Score=34.58 Aligned_cols=75 Identities=13% Similarity=-0.047 Sum_probs=44.4
Q ss_pred CCcEEEEecCCCCCCCHHhHHHHHHHHhhc-CC--CCceEEEcCCCCeeeeecC----CCCCHHHHHHHHHHHHHHHHHH
Q 026476 161 EVPLSILGAEIDRLSPPALVKEFEEALNAK-SG--VDSFVKIFPKVAHGWTVRY----NVEDETAVKAAEEAHHNLLEWF 233 (238)
Q Consensus 161 ~~P~L~i~g~~D~~~p~~~~~~~~~~~~~~-~~--~~~~~~~~~g~~H~~~~~~----~~~~~~~~~~~~~~~~~~~~fl 233 (238)
..|++++||..|.++|....-+-+-.+.+. -| ....+....++.|.-..-. ......-..+..++++.+.+||
T Consensus 555 GKPaIiVhGR~DaLlPvnh~Sr~Y~~ln~~~eG~~s~lrYyeV~naqHfDaf~~~pG~~~r~VPlh~Y~~qALd~M~a~L 634 (690)
T PF10605_consen 555 GKPAIIVHGRSDALLPVNHTSRPYLGLNRQVEGRASRLRYYEVTNAQHFDAFLDFPGFDTRFVPLHPYFFQALDLMWAHL 634 (690)
T ss_pred CCceEEEecccceecccCCCchHHHHHhhhhcccccceeEEEecCCeechhhccCCCCCcccccccHHHHHHHHHHHHHh
Confidence 569999999999999987554444444232 23 3566777777777443211 1111111235566777777777
Q ss_pred HH
Q 026476 234 AK 235 (238)
Q Consensus 234 ~~ 235 (238)
+.
T Consensus 635 ~~ 636 (690)
T PF10605_consen 635 KS 636 (690)
T ss_pred hc
Confidence 64
No 237
>PF06441 EHN: Epoxide hydrolase N terminus; InterPro: IPR010497 This entry represents the N-terminal region of the eukaryotic epoxide hydrolase protein. Epoxide hydrolases (3.3.2.3 from EC) comprise a group of functionally related enzymes that catalyse the addition of water to oxirane compounds (epoxides), thereby usually generating vicinal trans-diols. EHs have been found in all types of living organisms, including mammals, invertebrates, plants, fungi and bacteria. In animals, the major interest in EH is directed towards their detoxification capacity for epoxides since they are important safeguards against the cytotoxic and genotoxic potential of oxirane derivatives that are often reactive electrophiles because of the high tension of the three-membered ring system and the strong polarisation of the C--O bonds. This is of significant relevance because epoxides are frequent intermediary metabolites, which arise during the biotransformation of foreign compounds []. This domain is often found in conjunction with IPR000073 from INTERPRO.; GO: 0004301 epoxide hydrolase activity, 0009636 response to toxin, 0016020 membrane; PDB: 3G0I_B 3G02_A 1QO7_A.
Probab=72.43 E-value=5.8 Score=27.37 Aligned_cols=30 Identities=20% Similarity=0.273 Sum_probs=16.4
Q ss_pred EeeCCeeEEEec--CCC-CCeeEEEEeccCCCC
Q 026476 23 EKLGGLNAYVTG--SPD-SKLAVLLISDVYGYE 52 (238)
Q Consensus 23 ~~~~~~~~~~~~--p~~-~~~~vl~~hg~~g~~ 52 (238)
+.+++++..... +++ ...++||+||+.|+-
T Consensus 73 t~I~g~~iHFih~rs~~~~aiPLll~HGWPgSf 105 (112)
T PF06441_consen 73 TEIDGLDIHFIHVRSKRPNAIPLLLLHGWPGSF 105 (112)
T ss_dssp EEETTEEEEEEEE--S-TT-EEEEEE--SS--G
T ss_pred EEEeeEEEEEEEeeCCCCCCeEEEEECCCCccH
Confidence 367788777653 332 347899999999874
No 238
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=67.59 E-value=9.6 Score=24.26 Aligned_cols=36 Identities=17% Similarity=0.184 Sum_probs=27.4
Q ss_pred chhcHHHHHHHHHhc----CCceEEEEEeeccHHHHHHcc
Q 026476 101 GFEEAKPVIQALKSK----GITAIGAAGFCWGAKVVVQLG 136 (238)
Q Consensus 101 ~~~d~~~~~~~l~~~----~~~~i~l~G~S~GG~~a~~~a 136 (238)
-.+.+.+.+++++++ +++++.++|-|-|=.+|..++
T Consensus 19 C~~~V~~qI~yvk~~~~~~GpK~VLViGaStGyGLAsRIa 58 (78)
T PF12242_consen 19 CARNVENQIEYVKSQGKINGPKKVLVIGASTGYGLASRIA 58 (78)
T ss_dssp HHHHHHHHHHHHHHC---TS-SEEEEES-SSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCCCceEEEEecCCcccHHHHHH
Confidence 345678888888885 568999999999998887755
No 239
>COG3673 Uncharacterized conserved protein [Function unknown]
Probab=63.38 E-value=11 Score=31.17 Aligned_cols=36 Identities=22% Similarity=0.096 Sum_probs=28.5
Q ss_pred chhcHHHHHHHHHhc--CCceEEEEEeeccHHHHHHcc
Q 026476 101 GFEEAKPVIQALKSK--GITAIGAAGFCWGAKVVVQLG 136 (238)
Q Consensus 101 ~~~d~~~~~~~l~~~--~~~~i~l~G~S~GG~~a~~~a 136 (238)
....+..+..+|-.. ..++|.++|||-|+..+--+|
T Consensus 103 L~~nI~~AYrFL~~~yepGD~Iy~FGFSRGAf~aRVla 140 (423)
T COG3673 103 LVQNIREAYRFLIFNYEPGDEIYAFGFSRGAFSARVLA 140 (423)
T ss_pred HHHHHHHHHHHHHHhcCCCCeEEEeeccchhHHHHHHH
Confidence 445577777777665 678999999999999988765
No 240
>COG2185 Sbm Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) [Lipid metabolism]
Probab=62.11 E-value=58 Score=23.58 Aligned_cols=94 Identities=16% Similarity=0.186 Sum_probs=53.1
Q ss_pred CCCeeEEEEeccCCCCCchHHHHHHHHHHCCCEEEeccCCCCCccCCCCCcchHhhHhhcCCCcchhcHHHHHHHHHhcC
Q 026476 37 DSKLAVLLISDVYGYEAPNLRKLADKVAAAGFYVAVPDFFHGDPYVADGGKPLQEWIKDHGVDKGFEEAKPVIQALKSKG 116 (238)
Q Consensus 37 ~~~~~vl~~hg~~g~~~~~~~~~a~~l~~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~ 116 (238)
+.+|.|++.--+...+....+-+++.|++.||.|+..-.+ .+ -.++++...+.+
T Consensus 10 g~rprvlvak~GlDgHd~gakvia~~l~d~GfeVi~~g~~----~t----------------------p~e~v~aA~~~d 63 (143)
T COG2185 10 GARPRVLVAKLGLDGHDRGAKVIARALADAGFEVINLGLF----QT----------------------PEEAVRAAVEED 63 (143)
T ss_pred CCCceEEEeccCccccccchHHHHHHHHhCCceEEecCCc----CC----------------------HHHHHHHHHhcC
Confidence 3456666555333322356678899999999999986652 00 122333334446
Q ss_pred CceEEEEEeeccHHHHHHcc----CCcCceEEEEeccCCcCccc
Q 026476 117 ITAIGAAGFCWGAKVVVQLG----KREFIQAAVLLHPSFVTVDD 156 (238)
Q Consensus 117 ~~~i~l~G~S~GG~~a~~~a----~~~~i~a~i~~~~~~~~~~~ 156 (238)
..-|++.+.+.|...-..-. +...+..+..+.|..+++++
T Consensus 64 v~vIgvSsl~g~h~~l~~~lve~lre~G~~~i~v~~GGvip~~d 107 (143)
T COG2185 64 VDVIGVSSLDGGHLTLVPGLVEALREAGVEDILVVVGGVIPPGD 107 (143)
T ss_pred CCEEEEEeccchHHHHHHHHHHHHHHhCCcceEEeecCccCchh
Confidence 67777777776655444321 22344445545556565554
No 241
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=60.14 E-value=31 Score=34.18 Aligned_cols=91 Identities=16% Similarity=0.332 Sum_probs=53.2
Q ss_pred CCeeEEEEeccCCCCCchHHHHHHHHHHCCCEEEeccCCCCCccCCCCCcchHhhHhhcCCCcchhcHHH-HHHHHHhc-
Q 026476 38 SKLAVLLISDVYGYEAPNLRKLADKVAAAGFYVAVPDFFHGDPYVADGGKPLQEWIKDHGVDKGFEEAKP-VIQALKSK- 115 (238)
Q Consensus 38 ~~~~vl~~hg~~g~~~~~~~~~a~~l~~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~~l~~~- 115 (238)
+.|++.|+|.+-|.. ..++.++..|. +|-| |...+ +.-+...++++.+ .++.+++.
T Consensus 2122 e~~~~Ffv~pIEG~t-t~l~~la~rle-------~PaY--glQ~T------------~~vP~dSies~A~~yirqirkvQ 2179 (2376)
T KOG1202|consen 2122 EEPPLFFVHPIEGFT-TALESLASRLE-------IPAY--GLQCT------------EAVPLDSIESLAAYYIRQIRKVQ 2179 (2376)
T ss_pred cCCceEEEeccccch-HHHHHHHhhcC-------Ccch--hhhcc------------ccCCcchHHHHHHHHHHHHHhcC
Confidence 468999999988874 45565555432 2222 22111 1111222333333 45566554
Q ss_pred CCceEEEEEeeccHHHHHHccC----CcCceEEEEeccC
Q 026476 116 GITAIGAAGFCWGAKVVVQLGK----REFIQAAVLLHPS 150 (238)
Q Consensus 116 ~~~~i~l~G~S~GG~~a~~~a~----~~~i~a~i~~~~~ 150 (238)
+..+--++|.|+|..++..++. .......|.+.|.
T Consensus 2180 P~GPYrl~GYSyG~~l~f~ma~~Lqe~~~~~~lillDGs 2218 (2376)
T KOG1202|consen 2180 PEGPYRLAGYSYGACLAFEMASQLQEQQSPAPLILLDGS 2218 (2376)
T ss_pred CCCCeeeeccchhHHHHHHHHHHHHhhcCCCcEEEecCc
Confidence 5567889999999999998872 2345557776553
No 242
>COG4822 CbiK Cobalamin biosynthesis protein CbiK, Co2+ chelatase [Coenzyme metabolism]
Probab=59.42 E-value=64 Score=25.19 Aligned_cols=56 Identities=23% Similarity=0.255 Sum_probs=32.9
Q ss_pred eeEEEEeccCCCCCchHHHHHHHHHHCCC-EEEeccCCCCCccCCCCCcchHhhHhhcCCCcchhcHHHHHHHHHhcCCc
Q 026476 40 LAVLLISDVYGYEAPNLRKLADKVAAAGF-YVAVPDFFHGDPYVADGGKPLQEWIKDHGVDKGFEEAKPVIQALKSKGIT 118 (238)
Q Consensus 40 ~~vl~~hg~~g~~~~~~~~~a~~l~~~G~-~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~ 118 (238)
..|++.||........|.-+-..|...|| .|++... .|. .++..++++++..+..
T Consensus 139 ~~vlmgHGt~h~s~~~YacLd~~~~~~~f~~v~v~~v-e~y-----------------------P~~d~vi~~l~~~~~~ 194 (265)
T COG4822 139 ILVLMGHGTDHHSNAAYACLDHVLDEYGFDNVFVAAV-EGY-----------------------PLVDTVIEYLRKNGIK 194 (265)
T ss_pred EEEEEecCCCccHHHHHHHHHHHHHhcCCCceEEEEe-cCC-----------------------CcHHHHHHHHHHcCCc
Confidence 44556666544333455556666777788 5555444 232 2467788888876544
Q ss_pred e
Q 026476 119 A 119 (238)
Q Consensus 119 ~ 119 (238)
.
T Consensus 195 ~ 195 (265)
T COG4822 195 E 195 (265)
T ss_pred e
Confidence 4
No 243
>TIGR02884 spore_pdaA delta-lactam-biosynthetic de-N-acetylase. Muramic delta-lactam is an unusual constituent of peptidoglycan, found only in bacterial spores in the peptidoglycan wall, or spore cortex. The proteins in this family are PdaA (yfjS), a member of a larger family of polysaccharide deacetylases, and are specificially involved in delta-lactam biosynthesis. PdaA acts immediately after CwlD, an N-acetylmuramoyl-L-alanine amidase and performs a de-N-acetylation. PdaA may also perform the following transpeptidation for lactam ring formation, as heterologous expression in E. coli of CwlD and PdaA together is sufficient for delta-lactam production.
Probab=58.72 E-value=13 Score=28.97 Aligned_cols=35 Identities=26% Similarity=0.320 Sum_probs=26.8
Q ss_pred eeEEEEeccCCCCCchHHHHHHHHHHCCCEEEecc
Q 026476 40 LAVLLISDVYGYEAPNLRKLADKVAAAGFYVAVPD 74 (238)
Q Consensus 40 ~~vl~~hg~~g~~~~~~~~~a~~l~~~G~~v~~~d 74 (238)
..||++|.........+..+.+.|.++||..+.++
T Consensus 187 g~IiLlHd~~~~t~~aL~~ii~~lk~~Gy~fvtl~ 221 (224)
T TIGR02884 187 GAILLLHAVSKDNAEALDKIIKDLKEQGYTFKSLD 221 (224)
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEhH
Confidence 35899998543334567889999999999988765
No 244
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=57.72 E-value=10 Score=32.35 Aligned_cols=90 Identities=14% Similarity=0.099 Sum_probs=45.1
Q ss_pred CCeeEEEEeccCCCCCchHHHHHHHHHHCC----------------------CEEEeccCCCCCccCCCCCcchHhhHhh
Q 026476 38 SKLAVLLISDVYGYEAPNLRKLADKVAAAG----------------------FYVAVPDFFHGDPYVADGGKPLQEWIKD 95 (238)
Q Consensus 38 ~~~~vl~~hg~~g~~~~~~~~~a~~l~~~G----------------------~~v~~~d~~~g~~~~~~~~~~~~~~~~~ 95 (238)
+.|.||.+.|+.|.. ..+ -.|.+.| ..++-+|.+-|.|.|....... ..
T Consensus 39 ~~Pl~~wlnGGPG~S-S~~----g~f~e~GP~~~~~~~~~~l~~n~~sW~~~an~l~iD~PvGtGfS~~~~~~~----~~ 109 (415)
T PF00450_consen 39 DDPLILWLNGGPGCS-SMW----GLFGENGPFRINPDGPYTLEDNPYSWNKFANLLFIDQPVGTGFSYGNDPSD----YV 109 (415)
T ss_dssp SS-EEEEEE-TTTB--THH----HHHCTTSSEEEETTSTSEEEE-TT-GGGTSEEEEE--STTSTT-EESSGGG----GS
T ss_pred CccEEEEecCCceec-ccc----ccccccCceEEeecccccccccccccccccceEEEeecCceEEeecccccc----cc
Confidence 458888999988864 221 2233333 4455556434555544321110 01
Q ss_pred cCCCcchhcHHHHHHHH-Hhc---CCceEEEEEeeccHHHHHHcc
Q 026476 96 HGVDKGFEEAKPVIQAL-KSK---GITAIGAAGFCWGAKVVVQLG 136 (238)
Q Consensus 96 ~~~~~~~~d~~~~~~~l-~~~---~~~~i~l~G~S~GG~~a~~~a 136 (238)
.+.++..+|+..++... ... ...++.|.|-|+||..+..+|
T Consensus 110 ~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a 154 (415)
T PF00450_consen 110 WNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALA 154 (415)
T ss_dssp -SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHH
T ss_pred chhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhH
Confidence 12233444444444322 222 345999999999999887765
No 245
>KOG2170 consensus ATPase of the AAA+ superfamily [General function prediction only]
Probab=56.83 E-value=12 Score=30.69 Aligned_cols=48 Identities=15% Similarity=0.119 Sum_probs=31.3
Q ss_pred CeeEEEecCCCCCeeEEEEeccCCCCCchH-HHHHHHHHHCCCEEEecc
Q 026476 27 GLNAYVTGSPDSKLAVLLISDVYGYEAPNL-RKLADKVAAAGFYVAVPD 74 (238)
Q Consensus 27 ~~~~~~~~p~~~~~~vl~~hg~~g~~~~~~-~~~a~~l~~~G~~v~~~d 74 (238)
.+.+|+..|...+|.+|=+||+.|+..... .-+|+.+.+.|..--.+.
T Consensus 97 alk~~~~n~~p~KPLvLSfHG~tGTGKN~Va~iiA~n~~~~Gl~S~~V~ 145 (344)
T KOG2170|consen 97 ALKSHWANPNPRKPLVLSFHGWTGTGKNYVAEIIAENLYRGGLRSPFVH 145 (344)
T ss_pred HHHHHhcCCCCCCCeEEEecCCCCCchhHHHHHHHHHHHhccccchhHH
Confidence 366888877766788888999999754333 345666666664433333
No 246
>TIGR02690 resist_ArsH arsenical resistance protein ArsH. Members of this protein family occur in arsenate resistance operons that include at least two different types of arsenate reductase. ArsH is not required for arsenate resistance in some systems. This family belongs to the larger family of NADPH-dependent FMN reductases (Pfam model pfam03358). The function of ArsH is not known.
Probab=56.53 E-value=36 Score=26.62 Aligned_cols=26 Identities=12% Similarity=0.068 Sum_probs=17.6
Q ss_pred HHHHHHHHHhc-------CCceEEEEEeeccHHH
Q 026476 105 AKPVIQALKSK-------GITAIGAAGFCWGAKV 131 (238)
Q Consensus 105 ~~~~~~~l~~~-------~~~~i~l~G~S~GG~~ 131 (238)
++.++||+... ..++++++|.| ||..
T Consensus 109 LKNaiDwls~~~~~~~~~~~KpvaivgaS-gg~~ 141 (219)
T TIGR02690 109 QKDQIDWIPLSVGPVRPTQGKTLAVMQVS-GGSQ 141 (219)
T ss_pred HHHHHHhcccCcccccccCCCcEEEEEeC-CcHh
Confidence 67788888542 24679999988 4433
No 247
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=55.21 E-value=7.1 Score=33.51 Aligned_cols=68 Identities=19% Similarity=0.290 Sum_probs=38.6
Q ss_pred ccCCcEEEEecCCCCCCCHHhHHHHHHHHhhcCCCCceEEEcCCCCeeeeecCCCCCHHHHHHHHHHHHHHHHHHHH
Q 026476 159 GVEVPLSILGAEIDRLSPPALVKEFEEALNAKSGVDSFVKIFPKVAHGWTVRYNVEDETAVKAAEEAHHNLLEWFAK 235 (238)
Q Consensus 159 ~~~~P~L~i~g~~D~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~ 235 (238)
.-..|++++.|.-|.+- .+....+.+.+ ...|...-..-.||.|+....+..+ ..+..++.+++||..
T Consensus 187 ~~p~P~VIv~gGlDs~q-eD~~~l~~~~l-~~rGiA~LtvDmPG~G~s~~~~l~~-------D~~~l~~aVLd~L~~ 254 (411)
T PF06500_consen 187 EKPYPTVIVCGGLDSLQ-EDLYRLFRDYL-APRGIAMLTVDMPGQGESPKWPLTQ-------DSSRLHQAVLDYLAS 254 (411)
T ss_dssp SS-EEEEEEE--TTS-G-GGGHHHHHCCC-HHCT-EEEEE--TTSGGGTTT-S-S--------CCHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCcchhH-HHHHHHHHHHH-HhCCCEEEEEccCCCcccccCCCCc-------CHHHHHHHHHHHHhc
Confidence 34569999999999864 34444444545 3467666666688888764322222 235788899999976
No 248
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2.3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A ....
Probab=53.14 E-value=11 Score=31.10 Aligned_cols=32 Identities=19% Similarity=0.225 Sum_probs=25.1
Q ss_pred HHHHHHHHhcCCceEEEEEeeccHHHHHHccC
Q 026476 106 KPVIQALKSKGITAIGAAGFCWGAKVVVQLGK 137 (238)
Q Consensus 106 ~~~~~~l~~~~~~~i~l~G~S~GG~~a~~~a~ 137 (238)
.++.+.+++.+..+-.++|||+|=..|+.++.
T Consensus 72 ~al~~~l~~~Gi~P~~v~GhSlGE~aA~~aaG 103 (318)
T PF00698_consen 72 VALARLLRSWGIKPDAVIGHSLGEYAALVAAG 103 (318)
T ss_dssp HHHHHHHHHTTHCESEEEESTTHHHHHHHHTT
T ss_pred hhhhhhhcccccccceeeccchhhHHHHHHCC
Confidence 34456667778888899999999999997763
No 249
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=52.55 E-value=16 Score=29.65 Aligned_cols=31 Identities=13% Similarity=0.208 Sum_probs=24.0
Q ss_pred HHHHHHHhcCCceEEEEEeeccHHHHHHccC
Q 026476 107 PVIQALKSKGITAIGAAGFCWGAKVVVQLGK 137 (238)
Q Consensus 107 ~~~~~l~~~~~~~i~l~G~S~GG~~a~~~a~ 137 (238)
++.+.+++.+..+-.++|||+|-..|+.++.
T Consensus 71 a~~~~l~~~Gi~p~~~~GhSlGE~aA~~~ag 101 (298)
T smart00827 71 ALARLWRSWGVRPDAVVGHSLGEIAAAYVAG 101 (298)
T ss_pred HHHHHHHHcCCcccEEEecCHHHHHHHHHhC
Confidence 3445566667778899999999999987763
No 250
>COG0529 CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism]
Probab=51.41 E-value=1.1e+02 Score=23.36 Aligned_cols=38 Identities=26% Similarity=0.267 Sum_probs=28.7
Q ss_pred CCeeEEEEeccCCCCCc-hHHHHHHHHHHCCCEEEeccC
Q 026476 38 SKLAVLLISDVYGYEAP-NLRKLADKVAAAGFYVAVPDF 75 (238)
Q Consensus 38 ~~~~vl~~hg~~g~~~~-~~~~~a~~l~~~G~~v~~~d~ 75 (238)
..+.+|.+.|..|+... --..+.+.|.+.|+.+++.|.
T Consensus 21 ~~~~viW~TGLSGsGKSTiA~ale~~L~~~G~~~y~LDG 59 (197)
T COG0529 21 QKGAVIWFTGLSGSGKSTIANALEEKLFAKGYHVYLLDG 59 (197)
T ss_pred CCCeEEEeecCCCCCHHHHHHHHHHHHHHcCCeEEEecC
Confidence 34678899997775422 225678888899999999996
No 251
>COG0431 Predicted flavoprotein [General function prediction only]
Probab=51.30 E-value=39 Score=25.44 Aligned_cols=61 Identities=25% Similarity=0.346 Sum_probs=41.1
Q ss_pred chHHHHHHHHHHC-CCEEEeccCCCCCccCCCCCcchHhhHhhcCCCcchhcHHHHHHHHHhc--CCceEEEEEeeccHH
Q 026476 54 PNLRKLADKVAAA-GFYVAVPDFFHGDPYVADGGKPLQEWIKDHGVDKGFEEAKPVIQALKSK--GITAIGAAGFCWGAK 130 (238)
Q Consensus 54 ~~~~~~a~~l~~~-G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~--~~~~i~l~G~S~GG~ 130 (238)
.....+.+.++.. |+.+.+|+|..+.+ .-++.++||+... ..+++.+++-|.|+.
T Consensus 56 ~~v~~~~~~i~~aD~li~~tPeYn~s~p----------------------g~lKnaiD~l~~~~~~~Kpv~~~~~s~g~~ 113 (184)
T COG0431 56 PAVQALREAIAAADGLIIATPEYNGSYP----------------------GALKNAIDWLSREALGGKPVLLLGTSGGGA 113 (184)
T ss_pred HHHHHHHHHHHhCCEEEEECCccCCCCC----------------------HHHHHHHHhCCHhHhCCCcEEEEecCCCch
Confidence 4467777887776 88888888822222 2356677777544 457888888888877
Q ss_pred HHHHcc
Q 026476 131 VVVQLG 136 (238)
Q Consensus 131 ~a~~~a 136 (238)
-.....
T Consensus 114 ~~~~a~ 119 (184)
T COG0431 114 GGLRAQ 119 (184)
T ss_pred hHHHHH
Confidence 777544
No 252
>PTZ00445 p36-lilke protein; Provisional
Probab=50.98 E-value=58 Score=25.36 Aligned_cols=93 Identities=19% Similarity=0.134 Sum_probs=53.5
Q ss_pred chHHHHHHHHHHCCCEEEeccCCCCCccCCCCCcchHhhHhhc-----CCCcchhcHHHHHHHHHhcCCceEEEEEeecc
Q 026476 54 PNLRKLADKVAAAGFYVAVPDFFHGDPYVADGGKPLQEWIKDH-----GVDKGFEEAKPVIQALKSKGITAIGAAGFCWG 128 (238)
Q Consensus 54 ~~~~~~a~~l~~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~-----~~~~~~~d~~~~~~~l~~~~~~~i~l~G~S~G 128 (238)
...+.+.+.|.+.|+.+++.|+ ...=..- .-++|.+.. -......++..++..+++.+. +|.++=||-=
T Consensus 29 ~~~~~~v~~L~~~GIk~Va~D~-DnTlI~~----HsgG~~~~~~~~~~~~~~~tpefk~~~~~l~~~~I-~v~VVTfSd~ 102 (219)
T PTZ00445 29 ESADKFVDLLNECGIKVIASDF-DLTMITK----HSGGYIDPDNDDIRVLTSVTPDFKILGKRLKNSNI-KISVVTFSDK 102 (219)
T ss_pred HHHHHHHHHHHHcCCeEEEecc-hhhhhhh----hcccccCCCcchhhhhccCCHHHHHHHHHHHHCCC-eEEEEEccch
Confidence 3456788999999999999998 3220000 000011110 011234567777777776543 7888888864
Q ss_pred HH--------------HHHHccC----CcCceEEEEeccCCc
Q 026476 129 AK--------------VVVQLGK----REFIQAAVLLHPSFV 152 (238)
Q Consensus 129 G~--------------~a~~~a~----~~~i~a~i~~~~~~~ 152 (238)
-. ++-.... .-.++.+.++||...
T Consensus 103 ~~~~~~~~~~~Isg~~li~~~lk~s~~~~~i~~~~~yyp~~w 144 (219)
T PTZ00445 103 ELIPSENRPRYISGDRMVEAALKKSKCDFKIKKVYAYYPKFW 144 (219)
T ss_pred hhccccCCcceechHHHHHHHHHhcCccceeeeeeeeCCccc
Confidence 33 4433332 126778888888843
No 253
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=49.23 E-value=26 Score=30.45 Aligned_cols=20 Identities=15% Similarity=0.152 Sum_probs=16.4
Q ss_pred CceEEEEEeeccHHHHHHcc
Q 026476 117 ITAIGAAGFCWGAKVVVQLG 136 (238)
Q Consensus 117 ~~~i~l~G~S~GG~~a~~~a 136 (238)
..++.++|.|+||..+..+|
T Consensus 164 ~~~~yi~GESYaG~yvP~la 183 (433)
T PLN03016 164 SNPLYVVGDSYSGMIVPALV 183 (433)
T ss_pred CCCEEEEccCccceehHHHH
Confidence 45899999999998776654
No 254
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit. Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group.
Probab=48.96 E-value=19 Score=29.25 Aligned_cols=29 Identities=17% Similarity=0.142 Sum_probs=23.1
Q ss_pred HHHHHHhcCCceEEEEEeeccHHHHHHcc
Q 026476 108 VIQALKSKGITAIGAAGFCWGAKVVVQLG 136 (238)
Q Consensus 108 ~~~~l~~~~~~~i~l~G~S~GG~~a~~~a 136 (238)
..+.+++.+..+..++|||+|=..|..++
T Consensus 66 l~~~l~~~g~~P~~v~GhS~GE~aAa~~a 94 (295)
T TIGR03131 66 AWRALLALLPRPSAVAGYSVGEYAAAVVA 94 (295)
T ss_pred HHHHHHhcCCCCcEEeecCHHHHHHHHHh
Confidence 44555666778899999999999888866
No 255
>TIGR02764 spore_ybaN_pdaB polysaccharide deacetylase family sporulation protein PdaB. This model describes the YbaN protein family, also called PdaB and SpoVIE, of Gram-positive bacteria. Although ybaN null mutants have only a mild sporulation defect, ybaN/ytrI double mutants show drastically reducted sporulation efficiencies. This synthetic defect suggests the role of this sigmaE-controlled gene in sporulation had been masked by functional redundancy. Members of this family are homologous to a characterized polysaccharide deacetylase; the exact function this protein family is unknown.
Probab=47.78 E-value=19 Score=27.18 Aligned_cols=34 Identities=12% Similarity=0.226 Sum_probs=24.3
Q ss_pred eEEEEeccCC--CCCchHHHHHHHHHHCCCEEEecc
Q 026476 41 AVLLISDVYG--YEAPNLRKLADKVAAAGFYVAVPD 74 (238)
Q Consensus 41 ~vl~~hg~~g--~~~~~~~~~a~~l~~~G~~v~~~d 74 (238)
.||++|.... .....+..+.+.|.++||..+.++
T Consensus 153 ~Iil~Hd~~~~~~t~~~l~~~i~~l~~~Gy~~vtl~ 188 (191)
T TIGR02764 153 DIILLHASDSAKQTVKALPTIIKKLKEKGYEFVTIS 188 (191)
T ss_pred CEEEEeCCCCcHhHHHHHHHHHHHHHHCCCEEEEHH
Confidence 4999995322 113456788899999999988764
No 256
>COG1647 Esterase/lipase [General function prediction only]
Probab=45.70 E-value=35 Score=26.82 Aligned_cols=47 Identities=21% Similarity=0.341 Sum_probs=32.2
Q ss_pred ccccCCcEEEEecCCCCCCCHHhHHHHHHHHhhcCCCCceEEEcCCCCeeeee
Q 026476 157 IKGVEVPLSILGAEIDRLSPPALVKEFEEALNAKSGVDSFVKIFPKVAHGWTV 209 (238)
Q Consensus 157 ~~~~~~P~L~i~g~~D~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~H~~~~ 209 (238)
+..-+.-+|+|||- .-.+..++.+.+.++ ..|-.+..-.|| |||...
T Consensus 11 f~~G~~AVLllHGF---TGt~~Dvr~Lgr~L~-e~GyTv~aP~yp--GHG~~~ 57 (243)
T COG1647 11 FEGGNRAVLLLHGF---TGTPRDVRMLGRYLN-ENGYTVYAPRYP--GHGTLP 57 (243)
T ss_pred eccCCEEEEEEecc---CCCcHHHHHHHHHHH-HCCceEecCCCC--CCCCCH
Confidence 33445679999993 236789999999995 446555555577 577643
No 257
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=45.63 E-value=63 Score=28.39 Aligned_cols=27 Identities=22% Similarity=0.171 Sum_probs=24.1
Q ss_pred CCcEEEEecCCCCCCCHHhHHHHHHHH
Q 026476 161 EVPLSILGAEIDRLSPPALVKEFEEAL 187 (238)
Q Consensus 161 ~~P~L~i~g~~D~~~p~~~~~~~~~~~ 187 (238)
..++|+.+|+.|-+++.-..+++.+.+
T Consensus 364 gikVLiYnGd~D~icn~~Gt~~wi~~L 390 (462)
T PTZ00472 364 GVRVMIYAGDMDFICNWIGNKAWTLAL 390 (462)
T ss_pred CceEEEEECCcCeecCcHhHHHHHHhC
Confidence 469999999999999998888888877
No 258
>COG0505 CarA Carbamoylphosphate synthase small subunit [Amino acid transport and metabolism / Nucleotide transport and metabolism]
Probab=45.59 E-value=1e+02 Score=26.07 Aligned_cols=73 Identities=18% Similarity=0.167 Sum_probs=42.0
Q ss_pred HHHHHHHHHCCCEEEeccCCCCCc-----cCCCCCcchHhhHhhcCCCcchhcHHHHHHHHHhcCCceEEEEEeeccHHH
Q 026476 57 RKLADKVAAAGFYVAVPDFFHGDP-----YVADGGKPLQEWIKDHGVDKGFEEAKPVIQALKSKGITAIGAAGFCWGAKV 131 (238)
Q Consensus 57 ~~~a~~l~~~G~~v~~~d~~~g~~-----~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~i~l~G~S~GG~~ 131 (238)
+.+.+.|+++|+.|.++.+ .-.. ..+. ..+-...+ ..-+.+..+++.+++.-..+|=++|.|+|=.+
T Consensus 191 ~nIlr~L~~rg~~vtVVP~-~t~~eeIl~~~pD------GiflSNGP-GDP~~~~~~i~~ik~l~~~~iPifGICLGHQl 262 (368)
T COG0505 191 RNILRELVKRGCRVTVVPA-DTSAEEILALNPD------GIFLSNGP-GDPAPLDYAIETIKELLGTKIPIFGICLGHQL 262 (368)
T ss_pred HHHHHHHHHCCCeEEEEcC-CCCHHHHHhhCCC------EEEEeCCC-CChhHHHHHHHHHHHHhccCCCeEEEcHHHHH
Confidence 3577889999999998887 2211 0000 01111111 11145566666666552234469999999988
Q ss_pred HHHccC
Q 026476 132 VVQLGK 137 (238)
Q Consensus 132 a~~~a~ 137 (238)
..++..
T Consensus 263 lalA~G 268 (368)
T COG0505 263 LALALG 268 (368)
T ss_pred HHHhcC
Confidence 877653
No 259
>PHA02519 plasmid partition protein SopA; Reviewed
Probab=45.58 E-value=31 Score=29.52 Aligned_cols=36 Identities=17% Similarity=-0.001 Sum_probs=25.0
Q ss_pred CeeEEEEe---ccCCCCCchHHHHHHHHHHCCCEEEeccC
Q 026476 39 KLAVLLIS---DVYGYEAPNLRKLADKVAAAGFYVAVPDF 75 (238)
Q Consensus 39 ~~~vl~~h---g~~g~~~~~~~~~a~~l~~~G~~v~~~d~ 75 (238)
.+.||.+. |+.|.. .....+|..|+.+|+.|+++|.
T Consensus 105 ~~~vIav~n~KGGVGKT-Tta~nLA~~LA~~G~rVLlIDl 143 (387)
T PHA02519 105 NPVVLAVMSHKGGVYKT-SSAVHTAQWLALQGHRVLLIEG 143 (387)
T ss_pred CceEEEEecCCCCCcHH-HHHHHHHHHHHhCCCcEEEEeC
Confidence 34455555 344432 3446899999999999999994
No 260
>PF06792 UPF0261: Uncharacterised protein family (UPF0261); InterPro: IPR008322 The proteins in this entry are functionally uncharacterised.
Probab=45.37 E-value=1.4e+02 Score=25.79 Aligned_cols=94 Identities=15% Similarity=0.086 Sum_probs=51.2
Q ss_pred EEEeccCCCCCchHHHHHHHHHHCCCEEEeccCCCCCccCCCC-CcchHhhHhhc-----------CCCcchhc-HHHHH
Q 026476 43 LLISDVYGYEAPNLRKLADKVAAAGFYVAVPDFFHGDPYVADG-GKPLQEWIKDH-----------GVDKGFEE-AKPVI 109 (238)
Q Consensus 43 l~~hg~~g~~~~~~~~~a~~l~~~G~~v~~~d~~~g~~~~~~~-~~~~~~~~~~~-----------~~~~~~~d-~~~~~ 109 (238)
|++-|-..++...+..+.+.+.+.|..|+.+|. .-.+.+... .-+..+..... +..+.++- ...+.
T Consensus 4 I~iigT~DTK~~E~~yl~~~i~~~G~~v~~iDv-g~~~~~~~~~di~~~eVa~~~g~~~~~~~~~~dRg~ai~~M~~ga~ 82 (403)
T PF06792_consen 4 IAIIGTLDTKGEELLYLRDQIEAQGVEVLLIDV-GTLGEPSFPPDISREEVARAAGDSIEAVRSSGDRGEAIEAMARGAA 82 (403)
T ss_pred EEEEEccCCCHHHHHHHHHHHHHCCCcEEEEEc-CCCCCCCCCCCcCHHHHHHhcCCChHHhhccCCHHHHHHHHHHHHH
Confidence 344455555567788899999999999999998 222222111 11111111111 11111111 22223
Q ss_pred HHHHhc----CCceEEEEEeeccHHHHHHccC
Q 026476 110 QALKSK----GITAIGAAGFCWGAKVVVQLGK 137 (238)
Q Consensus 110 ~~l~~~----~~~~i~l~G~S~GG~~a~~~a~ 137 (238)
.+++++ ...-|.-+|-|.|..++..+.+
T Consensus 83 ~~v~~l~~~g~i~Gvi~~GGs~GT~lat~aMr 114 (403)
T PF06792_consen 83 RFVSDLYDEGKIDGVIGIGGSGGTALATAAMR 114 (403)
T ss_pred HHHHHHHhcCCccEEEEecCCccHHHHHHHHH
Confidence 333333 2456778888999999988764
No 261
>KOG4389 consensus Acetylcholinesterase/Butyrylcholinesterase [Signal transduction mechanisms]
Probab=44.39 E-value=1e+02 Score=27.41 Aligned_cols=47 Identities=21% Similarity=0.208 Sum_probs=31.0
Q ss_pred hcHHHHHHHHHhc------CCceEEEEEeeccHHHHHH-ccC---CcCceEEEEecc
Q 026476 103 EEAKPVIQALKSK------GITAIGAAGFCWGAKVVVQ-LGK---REFIQAAVLLHP 149 (238)
Q Consensus 103 ~d~~~~~~~l~~~------~~~~i~l~G~S~GG~~a~~-~a~---~~~i~a~i~~~~ 149 (238)
-|-+-++.|+++. ++++|.|+|-|.|+.-+.. +.+ ++.++.+|+-+|
T Consensus 197 ~DQqLAl~WV~~Ni~aFGGnp~~vTLFGESAGaASv~aHLlsP~S~glF~raIlQSG 253 (601)
T KOG4389|consen 197 LDQQLALQWVQENIAAFGGNPSRVTLFGESAGAASVVAHLLSPGSRGLFHRAILQSG 253 (601)
T ss_pred HHHHHHHHHHHHhHHHhCCCcceEEEeccccchhhhhheecCCCchhhHHHHHhhcC
Confidence 3455577888776 5789999999999876655 332 234455554433
No 262
>COG2830 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=44.18 E-value=7.5 Score=28.75 Aligned_cols=37 Identities=11% Similarity=0.089 Sum_probs=29.5
Q ss_pred ceEEEEEeeccHHHHHHccCCcCceEEEEeccCCcCc
Q 026476 118 TAIGAAGFCWGAKVVVQLGKREFIQAAVLLHPSFVTV 154 (238)
Q Consensus 118 ~~i~l~G~S~GG~~a~~~a~~~~i~a~i~~~~~~~~~ 154 (238)
..|-++.+|||-++|-.+...-+++..+++.|...+-
T Consensus 57 ~hirlvAwSMGVwvAeR~lqg~~lksatAiNGTgLpc 93 (214)
T COG2830 57 RHIRLVAWSMGVWVAERVLQGIRLKSATAINGTGLPC 93 (214)
T ss_pred hhhhhhhhhHHHHHHHHHHhhccccceeeecCCCCCc
Confidence 3566899999999999988766788888888776543
No 263
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=43.62 E-value=1e+02 Score=20.96 Aligned_cols=20 Identities=25% Similarity=0.197 Sum_probs=15.0
Q ss_pred hHHHHHHHHHHCCCEEEecc
Q 026476 55 NLRKLADKVAAAGFYVAVPD 74 (238)
Q Consensus 55 ~~~~~a~~l~~~G~~v~~~d 74 (238)
...-++..|...||.|+...
T Consensus 15 G~~~~~~~l~~~G~~V~~lg 34 (119)
T cd02067 15 GKNIVARALRDAGFEVIDLG 34 (119)
T ss_pred HHHHHHHHHHHCCCEEEECC
Confidence 34677888888999996654
No 264
>COG3340 PepE Peptidase E [Amino acid transport and metabolism]
Probab=43.52 E-value=84 Score=24.53 Aligned_cols=38 Identities=13% Similarity=0.145 Sum_probs=27.0
Q ss_pred CCeeEEEEeccCCCCC--chHHHHHHHHHHCCCEEEeccC
Q 026476 38 SKLAVLLISDVYGYEA--PNLRKLADKVAAAGFYVAVPDF 75 (238)
Q Consensus 38 ~~~~vl~~hg~~g~~~--~~~~~~a~~l~~~G~~v~~~d~ 75 (238)
+.+.|.++.-..+... .+.......|+++|+.+.-.+.
T Consensus 31 ~~~~i~FIPtAs~~~~~~~Yv~k~~~~l~~lg~~v~~L~l 70 (224)
T COG3340 31 KRKTIAFIPTASVDSEDDFYVEKVRNALAKLGLEVSELHL 70 (224)
T ss_pred CCceEEEEecCccccchHHHHHHHHHHHHHcCCeeeeeec
Confidence 3567888876555432 2456778889999999988887
No 265
>KOG2385 consensus Uncharacterized conserved protein [Function unknown]
Probab=42.48 E-value=28 Score=30.83 Aligned_cols=38 Identities=26% Similarity=0.563 Sum_probs=26.7
Q ss_pred cCCceEEEEEeeccHHHHHH----ccCCc---CceEEEEeccCCc
Q 026476 115 KGITAIGAAGFCWGAKVVVQ----LGKRE---FIQAAVLLHPSFV 152 (238)
Q Consensus 115 ~~~~~i~l~G~S~GG~~a~~----~a~~~---~i~a~i~~~~~~~ 152 (238)
++..+|.++|||.|+.+... ++... -|..++++..+..
T Consensus 444 qG~RPVTLVGFSLGARvIf~CL~~Lakkke~~iIEnViL~GaPv~ 488 (633)
T KOG2385|consen 444 QGNRPVTLVGFSLGARVIFECLLELAKKKEVGIIENVILFGAPVP 488 (633)
T ss_pred cCCCceeEeeeccchHHHHHHHHHHhhcccccceeeeeeccCCcc
Confidence 36779999999999999874 33322 4666776665544
No 266
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=41.78 E-value=28 Score=28.03 Aligned_cols=28 Identities=25% Similarity=0.251 Sum_probs=21.9
Q ss_pred HHHHHhcC-CceEEEEEeeccHHHHHHcc
Q 026476 109 IQALKSKG-ITAIGAAGFCWGAKVVVQLG 136 (238)
Q Consensus 109 ~~~l~~~~-~~~i~l~G~S~GG~~a~~~a 136 (238)
.+.+++.+ ..+-.++|||+|=..|+.++
T Consensus 73 ~~~l~~~g~i~p~~v~GhS~GE~aAa~~a 101 (290)
T TIGR00128 73 YLKLKEQGGLKPDFAAGHSLGEYSALVAA 101 (290)
T ss_pred HHHHHHcCCCCCCEEeecCHHHHHHHHHh
Confidence 34455555 77889999999999888776
No 267
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=40.95 E-value=56 Score=27.63 Aligned_cols=31 Identities=26% Similarity=0.361 Sum_probs=25.2
Q ss_pred EEEEeccCCCCCchHHHHHHHHHHCCCEEEeccC
Q 026476 42 VLLISDVYGYEAPNLRKLADKVAAAGFYVAVPDF 75 (238)
Q Consensus 42 vl~~hg~~g~~~~~~~~~a~~l~~~G~~v~~~d~ 75 (238)
||++|..+- ..++.+++.|+++|+.|.++-.
T Consensus 2 il~~~~~~p---~~~~~la~~L~~~G~~v~~~~~ 32 (396)
T cd03818 2 ILFVHQNFP---GQFRHLAPALAAQGHEVVFLTE 32 (396)
T ss_pred EEEECCCCc---hhHHHHHHHHHHCCCEEEEEec
Confidence 788997553 3468999999999999988765
No 268
>PRK02399 hypothetical protein; Provisional
Probab=40.33 E-value=2.2e+02 Score=24.61 Aligned_cols=94 Identities=14% Similarity=0.168 Sum_probs=50.7
Q ss_pred EEEeccCCCCCchHHHHHHHHHHCCCEEEeccCCCCCccC--CCC----------CcchHhhHhhcCCCcchhc-HHHHH
Q 026476 43 LLISDVYGYEAPNLRKLADKVAAAGFYVAVPDFFHGDPYV--ADG----------GKPLQEWIKDHGVDKGFEE-AKPVI 109 (238)
Q Consensus 43 l~~hg~~g~~~~~~~~~a~~l~~~G~~v~~~d~~~g~~~~--~~~----------~~~~~~~~~~~~~~~~~~d-~~~~~ 109 (238)
|++-|-..++...+..+.+.+.++|..|+.+|. ...+.+ ..+ ..+........+..+.++- .+.+.
T Consensus 6 I~iigT~DTK~~E~~yl~~~i~~~g~~v~~iDv-~~~~~p~~~~dis~~~Va~~~g~~~~~~~~~~dRg~ai~~M~~ga~ 84 (406)
T PRK02399 6 IYIAGTLDTKGEELAYVKDLIEAAGLEVVTVDV-SGLGEPPFEPDISAEEVAEAAGDGIEAVFCGGDRGSAMAAMAEGAA 84 (406)
T ss_pred EEEEeccCCcHHHHHHHHHHHHHCCCceEEEec-CCCCCCCCCCCCCHHHHHHHcCCCHHHhhcCccHHHHHHHHHHHHH
Confidence 445555666556777888888889999999997 322211 110 0111111111111111111 22222
Q ss_pred HHHHh---c-CCceEEEEEeeccHHHHHHccC
Q 026476 110 QALKS---K-GITAIGAAGFCWGAKVVVQLGK 137 (238)
Q Consensus 110 ~~l~~---~-~~~~i~l~G~S~GG~~a~~~a~ 137 (238)
.++++ + ...-|.-+|-|.|..++..+.+
T Consensus 85 ~~v~~L~~~g~i~gviglGGs~GT~lat~aMr 116 (406)
T PRK02399 85 AFVRELYERGDVAGVIGLGGSGGTALATPAMR 116 (406)
T ss_pred HHHHHHHhcCCccEEEEecCcchHHHHHHHHH
Confidence 33332 2 3567888888999999988663
No 269
>PF03853 YjeF_N: YjeF-related protein N-terminus; InterPro: IPR004443 The YjeF N-terminal domains occur either as single proteins or fusions with other domains and are commonly associated with enzymes. In bacteria and archaea, YjeF N-terminal domains are often fused to a YjeF C-terminal domain with high structural homology to the members of a ribokinase-like superfamily (see PDOC00806 from PROSITEDOC)and/or belong to operons that encode enzymes of diverse functions: pyridoxal phosphate biosynthetic protein PdxJ; phosphopanteine-protein transferase; ATP/GTP hydrolase; and pyruvate-formate lyase 1-activating enzyme. In plants, the YjeF N-terminal domain is fused to a C-terminal putative pyridoxamine 5'-phosphate oxidase. In eukaryotes, proteins that consist of (Sm)-FDF-YjeF N-terminal domains may be involved in RNA processing [, ]. The YjeF N-terminal domains represent a novel version of the Rossmann fold, one of the most common protein folds in nature observed in numerous enzyme families, that has acquired a set of catalytic residues and structural features that distinguish them from the conventional dehydrogenases. The YjeF N-terminal domain is comprised of a three-layer alpha-beta-alpha sandwich with a central beta-sheet surrounded by helices. The conservation of the acidic residues in the predicted active site of the YjeF N-terminal domains is reminiscent of the presence of such residues in the active sites of diverse hydrolases [, ].; PDB: 3K5W_A 2O8N_A 2DG2_F 3RNO_A 1JZT_B 3D3K_A 3D3J_A 3RSG_A 3RT9_A 3RRF_A ....
Probab=39.51 E-value=39 Score=25.06 Aligned_cols=36 Identities=19% Similarity=0.106 Sum_probs=25.4
Q ss_pred CCeeEEEEeccCCCCCchHHHHHHHHHHCCCEEEecc
Q 026476 38 SKLAVLLISDVYGYEAPNLRKLADKVAAAGFYVAVPD 74 (238)
Q Consensus 38 ~~~~vl~~hg~~g~~~~~~~~~a~~l~~~G~~v~~~d 74 (238)
..+.|+++.|.. ++..+--..|++|+++|+.|.++-
T Consensus 24 ~~~~v~il~G~G-nNGgDgl~~AR~L~~~G~~V~v~~ 59 (169)
T PF03853_consen 24 KGPRVLILCGPG-NNGGDGLVAARHLANRGYNVTVYL 59 (169)
T ss_dssp TT-EEEEEE-SS-HHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCeEEEEECCC-CChHHHHHHHHHHHHCCCeEEEEE
Confidence 457788888864 334455689999999999988833
No 270
>PF08250 Sperm_act_pep: Sperm-activating peptides; InterPro: IPR013254 The sperm-activating peptides (SAPs) are isolated in egg-conditioned media (egg jelly) of sea urchins. SAPs have several effects on sea urchin spermatozoa: stimulate sperm respiration and motility through intracellular alkalinization, transient elevation of cAMP, cGMP and Ca2+ levels in sperm cells [, ].
Probab=38.85 E-value=8.2 Score=14.31 Aligned_cols=6 Identities=50% Similarity=1.115 Sum_probs=2.9
Q ss_pred EeeccH
Q 026476 124 GFCWGA 129 (238)
Q Consensus 124 G~S~GG 129 (238)
||++||
T Consensus 1 gf~l~G 6 (10)
T PF08250_consen 1 GFSLGG 6 (10)
T ss_pred Cccccc
Confidence 445544
No 271
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=38.55 E-value=70 Score=26.47 Aligned_cols=63 Identities=13% Similarity=0.067 Sum_probs=35.4
Q ss_pred EEEeccCCCCCccCCCCCcchHhhHhhcCCCcchhcHHHHHH-HHHhc---CCceEEEEEeeccHHHHHHcc
Q 026476 69 YVAVPDFFHGDPYVADGGKPLQEWIKDHGVDKGFEEAKPVIQ-ALKSK---GITAIGAAGFCWGAKVVVQLG 136 (238)
Q Consensus 69 ~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-~l~~~---~~~~i~l~G~S~GG~~a~~~a 136 (238)
.++-+|.+-|.|.|...... . .......++|+..++. +++.. ...++.|.|-|+||..+-.+|
T Consensus 3 NvLfiDqPvGvGfSy~~~~~--~---~~~d~~~a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la 69 (319)
T PLN02213 3 NIIFLDQPVGSGFSYSKTPI--D---KTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALV 69 (319)
T ss_pred cEEEecCCCCCCCCCCCCCC--C---ccccHHHHHHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHH
Confidence 47778875566666532100 0 0111122355555543 33222 346899999999998777665
No 272
>PRK10673 acyl-CoA esterase; Provisional
Probab=37.94 E-value=1.9e+02 Score=22.28 Aligned_cols=63 Identities=14% Similarity=0.124 Sum_probs=36.3
Q ss_pred cCCcEEEEecCCCCCCCHHhHHHHHHHHhhcCCCCceEEEcCCCCeeeeecCCCCCHHHHHHHHHHHHHHHHHHHH
Q 026476 160 VEVPLSILGAEIDRLSPPALVKEFEEALNAKSGVDSFVKIFPKVAHGWTVRYNVEDETAVKAAEEAHHNLLEWFAK 235 (238)
Q Consensus 160 ~~~P~L~i~g~~D~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~ 235 (238)
...|++++||..+. ......+.+.+. + .+.++.+.--+||.+...... ..+...+++.+++++
T Consensus 15 ~~~~iv~lhG~~~~---~~~~~~~~~~l~-~---~~~vi~~D~~G~G~s~~~~~~------~~~~~~~d~~~~l~~ 77 (255)
T PRK10673 15 NNSPIVLVHGLFGS---LDNLGVLARDLV-N---DHDIIQVDMRNHGLSPRDPVM------NYPAMAQDLLDTLDA 77 (255)
T ss_pred CCCCEEEECCCCCc---hhHHHHHHHHHh-h---CCeEEEECCCCCCCCCCCCCC------CHHHHHHHHHHHHHH
Confidence 45789999997654 234445555552 2 355667766678876542221 234455556666553
No 273
>TIGR02873 spore_ylxY probable sporulation protein, polysaccharide deacetylase family. Members of this protein family are most closely related to TIGR02764, a subset of polysaccharide deacetylase family proteins found in a species if and only if the species forms endospores like those of Bacillus subtilis or Clostridium tetani. This family is likewise restricted to spore-formers, but is not universal among them in having sequences with full-length matches to the model.
Probab=37.71 E-value=38 Score=27.36 Aligned_cols=34 Identities=12% Similarity=0.219 Sum_probs=26.3
Q ss_pred eeEEEEeccCCCCCchHHHHHHHHHHCCCEEEecc
Q 026476 40 LAVLLISDVYGYEAPNLRKLADKVAAAGFYVAVPD 74 (238)
Q Consensus 40 ~~vl~~hg~~g~~~~~~~~~a~~l~~~G~~v~~~d 74 (238)
..||++|....+ ...+..+...|.++||..+.++
T Consensus 231 G~IILmHd~~~T-~~aL~~iI~~Lk~kGy~fvtl~ 264 (268)
T TIGR02873 231 GAMVLMHPTASS-TEGLEEMITIIKEKGYKIGTIT 264 (268)
T ss_pred CcEEEEcCCccH-HHHHHHHHHHHHHCCCEEEeHH
Confidence 358899976443 4567889999999999988775
No 274
>cd08194 Fe-ADH6 Iron-containing alcohol dehydrogenases-like. Iron-containing alcohol dehydrogenase-like. Proteins of this family have not been characterized. Their specific function is unknown. The protein structure represents a dehydroquinate synthase-like fold and belongs to the alcohol dehydrogenase-like superfamily. They are distinct from other alcohol dehydrogenases which contain different protein domains. Alcohol dehydrogenase catalyzes the reduction of acetaldehyde to alcohol with NADP as cofactor. Its activity requires iron ions.
Probab=37.52 E-value=1.9e+02 Score=24.46 Aligned_cols=64 Identities=23% Similarity=0.234 Sum_probs=40.0
Q ss_pred eEEEEeccCCCCCchHHHHHHHHHHCCCEEEeccCCCCCccCCCCCcchHhhHhhcCCCcchhcHHHHHHHHHhcCCceE
Q 026476 41 AVLLISDVYGYEAPNLRKLADKVAAAGFYVAVPDFFHGDPYVADGGKPLQEWIKDHGVDKGFEEAKPVIQALKSKGITAI 120 (238)
Q Consensus 41 ~vl~~hg~~g~~~~~~~~~a~~l~~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~i 120 (238)
.++++.+..-........+...|.+.|..+..++...+.+ ..+.+.++++.+++.+.+-|
T Consensus 25 r~livt~~~~~~~g~~~~v~~~L~~~gi~~~~~~~v~~~p--------------------~~~~v~~~~~~~~~~~~D~I 84 (375)
T cd08194 25 RPLIVTDKVMVKLGLVDKLTDSLKKEGIESAIFDDVVSEP--------------------TDESVEEGVKLAKEGGCDVI 84 (375)
T ss_pred eEEEEcCcchhhcchHHHHHHHHHHCCCeEEEECCCCCCc--------------------CHHHHHHHHHHHHhcCCCEE
Confidence 4666666432222356778888988898887766422221 24667888888887766665
Q ss_pred EEEE
Q 026476 121 GAAG 124 (238)
Q Consensus 121 ~l~G 124 (238)
.-+|
T Consensus 85 IaiG 88 (375)
T cd08194 85 IALG 88 (375)
T ss_pred EEeC
Confidence 5554
No 275
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=37.35 E-value=36 Score=25.11 Aligned_cols=31 Identities=32% Similarity=0.261 Sum_probs=24.6
Q ss_pred HHHHHHHhcCCceEEEEEeeccHHHHHHccC
Q 026476 107 PVIQALKSKGITAIGAAGFCWGAKVVVQLGK 137 (238)
Q Consensus 107 ~~~~~l~~~~~~~i~l~G~S~GG~~a~~~a~ 137 (238)
.+++.+.+++...-.+.|-|.|+..+..++.
T Consensus 15 Gvl~aL~e~gi~~d~v~GtSaGAi~aa~~a~ 45 (172)
T cd07198 15 GVAKALRERGPLIDIIAGTSAGAIVAALLAS 45 (172)
T ss_pred HHHHHHHHcCCCCCEEEEECHHHHHHHHHHc
Confidence 4566666666667779999999999999885
No 276
>PF01583 APS_kinase: Adenylylsulphate kinase; InterPro: IPR002891 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This domain contains an ATP binding P-loop motif [].; GO: 0005524 ATP binding, 0016301 kinase activity, 0016772 transferase activity, transferring phosphorus-containing groups, 0000103 sulfate assimilation; PDB: 1M7H_B 1M7G_B 3CR7_B 1D6J_A 2OFW_G 1X6V_B 1XNJ_A 1XJQ_B 2PEY_A 2PEZ_B ....
Probab=37.15 E-value=69 Score=23.54 Aligned_cols=36 Identities=22% Similarity=0.221 Sum_probs=25.5
Q ss_pred eeEEEEeccCCCCCch-HHHHHHHHHHCCCEEEeccC
Q 026476 40 LAVLLISDVYGYEAPN-LRKLADKVAAAGFYVAVPDF 75 (238)
Q Consensus 40 ~~vl~~hg~~g~~~~~-~~~~a~~l~~~G~~v~~~d~ 75 (238)
+.||.+.|..|+.... -..+.+.|.+.|+.|+..|.
T Consensus 2 g~vIwltGlsGsGKtTlA~~L~~~L~~~g~~~~~LDg 38 (156)
T PF01583_consen 2 GFVIWLTGLSGSGKTTLARALERRLFARGIKVYLLDG 38 (156)
T ss_dssp -EEEEEESSTTSSHHHHHHHHHHHHHHTTS-EEEEEH
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHHcCCcEEEecC
Confidence 5789999987764322 24677778888999999986
No 277
>PF13207 AAA_17: AAA domain; PDB: 3AKC_A 3AKE_A 3AKD_A 2QL6_G 2QT1_A 2QSZ_A 2QSY_A 2QT0_A 2QG6_A 2P0E_A ....
Probab=36.63 E-value=48 Score=22.45 Aligned_cols=31 Identities=35% Similarity=0.382 Sum_probs=24.3
Q ss_pred EEEEeccCCCCCchHHHHHHHHHHC-CCEEEeccC
Q 026476 42 VLLISDVYGYEAPNLRKLADKVAAA-GFYVAVPDF 75 (238)
Q Consensus 42 vl~~hg~~g~~~~~~~~~a~~l~~~-G~~v~~~d~ 75 (238)
+|++.|..|+.. ..++..|++. |+.++..|-
T Consensus 1 vI~I~G~~gsGK---ST~a~~La~~~~~~~i~~d~ 32 (121)
T PF13207_consen 1 VIIISGPPGSGK---STLAKELAERLGFPVISMDD 32 (121)
T ss_dssp EEEEEESTTSSH---HHHHHHHHHHHTCEEEEEHH
T ss_pred CEEEECCCCCCH---HHHHHHHHHHHCCeEEEecc
Confidence 578888877642 4688888887 999988886
No 278
>PF01656 CbiA: CobQ/CobB/MinD/ParA nucleotide binding domain; InterPro: IPR002586 This entry consists of various cobyrinic acid a,c-diamide synthases. These include CbiA and CbiP from Salmonella typhimurium []., and CobQ from Rhodobacter capsulatus []. These amidases catalyse amidations to various side chains of hydrogenobyrinic acid or cobyrinic acid a,c-diamide in the biosynthesis of cobalamin (vitamin B12) from uroporphyrinogen III. Vitamin B12 is an important cofactor and an essential nutrient for many plants and animals and is primarily produced by bacteria [].; PDB: 3K9G_A 3K9H_B 3EZ9_B 3EZF_A 3EZ2_B 3EZ6_A 3EZ7_A 1G3Q_A 1G3R_A 1DTS_A ....
Probab=36.44 E-value=56 Score=24.22 Aligned_cols=20 Identities=30% Similarity=0.308 Sum_probs=17.1
Q ss_pred HHHHHHHHHHCCCEEEeccC
Q 026476 56 LRKLADKVAAAGFYVAVPDF 75 (238)
Q Consensus 56 ~~~~a~~l~~~G~~v~~~d~ 75 (238)
...+|..|+++|+.|+++|.
T Consensus 16 a~~la~~la~~g~~VlliD~ 35 (195)
T PF01656_consen 16 AANLAQALARKGKKVLLIDL 35 (195)
T ss_dssp HHHHHHHHHHTTS-EEEEEE
T ss_pred HHHHHhcccccccccccccc
Confidence 35799999999999999998
No 279
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=35.88 E-value=1.3e+02 Score=24.92 Aligned_cols=28 Identities=18% Similarity=0.140 Sum_probs=24.7
Q ss_pred CCcEEEEecCCCCCCCHHhHHHHHHHHh
Q 026476 161 EVPLSILGAEIDRLSPPALVKEFEEALN 188 (238)
Q Consensus 161 ~~P~L~i~g~~D~~~p~~~~~~~~~~~~ 188 (238)
..++|+..|+.|-++|.-..+++.+.|.
T Consensus 233 ~i~VliY~Gd~D~icn~~g~~~wi~~L~ 260 (319)
T PLN02213 233 GYRSLIYSGDHDIAVPFLATQAWIRSLN 260 (319)
T ss_pred CceEEEEECCcCeeCCcHhHHHHHHhcC
Confidence 4699999999999999988888888883
No 280
>PLN03050 pyridoxine (pyridoxamine) 5'-phosphate oxidase; Provisional
Probab=35.74 E-value=80 Score=25.15 Aligned_cols=34 Identities=24% Similarity=0.114 Sum_probs=25.2
Q ss_pred eeEEEEeccCCCCCchHHHHHHHHHHCCCEEEecc
Q 026476 40 LAVLLISDVYGYEAPNLRKLADKVAAAGFYVAVPD 74 (238)
Q Consensus 40 ~~vl~~hg~~g~~~~~~~~~a~~l~~~G~~v~~~d 74 (238)
+.|+++.|.. ++..+-.-.|++|.++||.|.++-
T Consensus 61 ~~V~VlcG~G-NNGGDGlv~AR~L~~~G~~V~v~~ 94 (246)
T PLN03050 61 PRVLLVCGPG-NNGGDGLVAARHLAHFGYEVTVCY 94 (246)
T ss_pred CeEEEEECCC-CCchhHHHHHHHHHHCCCeEEEEE
Confidence 4588888754 434555689999999999887654
No 281
>PRK10279 hypothetical protein; Provisional
Probab=35.63 E-value=39 Score=27.77 Aligned_cols=32 Identities=34% Similarity=0.249 Sum_probs=25.7
Q ss_pred HHHHHHHHhcCCceEEEEEeeccHHHHHHccC
Q 026476 106 KPVIQALKSKGITAIGAAGFCWGAKVVVQLGK 137 (238)
Q Consensus 106 ~~~~~~l~~~~~~~i~l~G~S~GG~~a~~~a~ 137 (238)
..+++.+.+.+...-.++|-|+|+.++..+|.
T Consensus 21 iGVL~aL~E~gi~~d~i~GtS~GAlvga~yA~ 52 (300)
T PRK10279 21 IGVINALKKVGIEIDIVAGCSIGSLVGAAYAC 52 (300)
T ss_pred HHHHHHHHHcCCCcCEEEEEcHHHHHHHHHHc
Confidence 34667777777777789999999999998874
No 282
>PF10686 DUF2493: Protein of unknown function (DUF2493); InterPro: IPR019627 This entry is represented by Mycobacteriophage D29, Gp61. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. Members of this family are mainly Proteobacteria. The function is not known.
Probab=35.48 E-value=85 Score=19.57 Aligned_cols=32 Identities=16% Similarity=0.101 Sum_probs=19.8
Q ss_pred CeeEEEEeccCCCCCchHHHHHHHHHHC-CCEEEec
Q 026476 39 KLAVLLISDVYGYEAPNLRKLADKVAAA-GFYVAVP 73 (238)
Q Consensus 39 ~~~vl~~hg~~g~~~~~~~~~a~~l~~~-G~~v~~~ 73 (238)
.|.++|+||+.- .....+|..++.. |+.++.+
T Consensus 31 ~~~~~lvhGga~---~GaD~iA~~wA~~~gv~~~~~ 63 (71)
T PF10686_consen 31 HPDMVLVHGGAP---KGADRIAARWARERGVPVIRF 63 (71)
T ss_pred CCCEEEEECCCC---CCHHHHHHHHHHHCCCeeEEe
Confidence 366888888531 2345677777765 7765543
No 283
>PRK07877 hypothetical protein; Provisional
Probab=35.13 E-value=1.5e+02 Score=27.83 Aligned_cols=78 Identities=14% Similarity=0.128 Sum_probs=47.3
Q ss_pred CCceEEEEEeeccHHHHHHccCCcCceEEEEeccCCcCcccccccCCcEEEEecCCCCCCCHHhHHHHHHHHhhcCCCCc
Q 026476 116 GITAIGAAGFCWGAKVVVQLGKREFIQAAVLLHPSFVTVDDIKGVEVPLSILGAEIDRLSPPALVKEFEEALNAKSGVDS 195 (238)
Q Consensus 116 ~~~~i~l~G~S~GG~~a~~~a~~~~i~a~i~~~~~~~~~~~~~~~~~P~L~i~g~~D~~~p~~~~~~~~~~~~~~~~~~~ 195 (238)
...+|.++|-+.|+.++..+++..-+..+.++....+..+++.+ . ++...|-- ...++.+.+.+ .+.+..+
T Consensus 106 ~~~~V~IvG~GlGs~~a~~LaraGvvG~l~lvD~D~ve~sNLnR----q--~~~~~diG--~~Kv~~a~~~l-~~inp~i 176 (722)
T PRK07877 106 GRLRIGVVGLSVGHAIAHTLAAEGLCGELRLADFDTLELSNLNR----V--PAGVFDLG--VNKAVVAARRI-AELDPYL 176 (722)
T ss_pred hcCCEEEEEecHHHHHHHHHHHccCCCeEEEEcCCEEccccccc----c--cCChhhcc--cHHHHHHHHHH-HHHCCCC
Confidence 45799999999988888888865434667776666555554443 2 35555633 33344455555 2233345
Q ss_pred eEEEcCC
Q 026476 196 FVKIFPK 202 (238)
Q Consensus 196 ~~~~~~g 202 (238)
++..++.
T Consensus 177 ~v~~~~~ 183 (722)
T PRK07877 177 PVEVFTD 183 (722)
T ss_pred EEEEEec
Confidence 5666653
No 284
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=34.78 E-value=49 Score=24.78 Aligned_cols=31 Identities=29% Similarity=0.295 Sum_probs=23.8
Q ss_pred HHHHHHHhcCCceEEEEEeeccHHHHHHccC
Q 026476 107 PVIQALKSKGITAIGAAGFCWGAKVVVQLGK 137 (238)
Q Consensus 107 ~~~~~l~~~~~~~i~l~G~S~GG~~a~~~a~ 137 (238)
.+++.+.+++...=.++|-|.|+.++..++.
T Consensus 16 Gvl~~L~e~~~~~d~i~GtSaGai~aa~~a~ 46 (194)
T cd07207 16 GALKALEEAGILKKRVAGTSAGAITAALLAL 46 (194)
T ss_pred HHHHHHHHcCCCcceEEEECHHHHHHHHHHc
Confidence 4566666665555679999999999999874
No 285
>PRK13869 plasmid-partitioning protein RepA; Provisional
Probab=34.57 E-value=76 Score=27.34 Aligned_cols=37 Identities=22% Similarity=0.290 Sum_probs=25.4
Q ss_pred eEEEEe---ccCCCCCchHHHHHHHHHHCCCEEEeccCCCCC
Q 026476 41 AVLLIS---DVYGYEAPNLRKLADKVAAAGFYVAVPDFFHGD 79 (238)
Q Consensus 41 ~vl~~h---g~~g~~~~~~~~~a~~l~~~G~~v~~~d~~~g~ 79 (238)
.||.+. |+.|.. .....+|..|+..|+.|+++|. ..+
T Consensus 122 ~vIav~n~KGGvGKT-Tta~nLA~~LA~~G~rVLlIDl-DpQ 161 (405)
T PRK13869 122 QVIAVTNFKGGSGKT-TTSAHLAQYLALQGYRVLAVDL-DPQ 161 (405)
T ss_pred eEEEEEcCCCCCCHH-HHHHHHHHHHHhcCCceEEEcC-CCC
Confidence 344444 344432 3346899999999999999998 444
No 286
>COG5441 Uncharacterized conserved protein [Function unknown]
Probab=34.40 E-value=2.5e+02 Score=23.35 Aligned_cols=94 Identities=15% Similarity=0.113 Sum_probs=50.2
Q ss_pred EEEEeccCCCCCchHHHHHHHHHHCCCEEEeccCC-CCCccCCCCCcchHhhH-----------hhcCC-CcchhcHHHH
Q 026476 42 VLLISDVYGYEAPNLRKLADKVAAAGFYVAVPDFF-HGDPYVADGGKPLQEWI-----------KDHGV-DKGFEEAKPV 108 (238)
Q Consensus 42 vl~~hg~~g~~~~~~~~~a~~l~~~G~~v~~~d~~-~g~~~~~~~~~~~~~~~-----------~~~~~-~~~~~d~~~~ 108 (238)
.|++-|-...+...+..+++.+...|..++.+|.- .+...+..+ -+..+.. ...+. ........++
T Consensus 4 rIyVvgT~DTKg~EL~ylad~I~~aG~~~v~vDvs~~~~~~~~~d-is~~~VA~~hp~~~qAv~~~~Drg~AiaaMa~A~ 82 (401)
T COG5441 4 RIYVVGTADTKGEELAYLADLIEAAGGSPVLVDVSTLRNPTSEVD-ISAEDVAGAHPGGRQAVLDGNDRGSAIAAMAEAF 82 (401)
T ss_pred eEEEEecCCCcchhHHHHHHHHHHcCCCeEEEEeeccCCCCCCcc-cCHHHHhhhCCCcceeEeccCchhHHHHHHHHHH
Confidence 34445544454567788999999999999999982 122111111 1111111 11111 1222334566
Q ss_pred HHHHHhc-CCceEEEEEeeccHHHHHHcc
Q 026476 109 IQALKSK-GITAIGAAGFCWGAKVVVQLG 136 (238)
Q Consensus 109 ~~~l~~~-~~~~i~l~G~S~GG~~a~~~a 136 (238)
++++.++ +..-+.-+|-|.|-.++.-.+
T Consensus 83 ~r~l~sR~dV~gmig~GGsgGT~lit~~m 111 (401)
T COG5441 83 VRFLSSRGDVAGMIGMGGSGGTALITPAM 111 (401)
T ss_pred HHHhhcccchhheeecCCCcchHhhhhHH
Confidence 6777776 344555556677766666554
No 287
>cd01983 Fer4_NifH The Fer4_NifH superfamily contains a variety of proteins which share a common ATP-binding domain. Functionally, proteins in this superfamily use the energy from hydrolysis of NTP to transfer electron or ion.
Probab=34.04 E-value=77 Score=19.90 Aligned_cols=32 Identities=22% Similarity=0.226 Sum_probs=21.3
Q ss_pred EEEeccCCCC-CchHHHHHHHHHHCCCEEEecc
Q 026476 43 LLISDVYGYE-APNLRKLADKVAAAGFYVAVPD 74 (238)
Q Consensus 43 l~~hg~~g~~-~~~~~~~a~~l~~~G~~v~~~d 74 (238)
+++.|..|.. ......++..|++.|+.|+..|
T Consensus 2 ~~~~g~~G~Gktt~~~~l~~~l~~~g~~v~~~~ 34 (99)
T cd01983 2 IVVTGKGGVGKTTLAANLAAALAKRGKRVLLID 34 (99)
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHCCCeEEEEC
Confidence 3444433432 2344688999999999998887
No 288
>COG3233 Predicted deacetylase [General function prediction only]
Probab=33.99 E-value=2.3e+02 Score=22.24 Aligned_cols=36 Identities=25% Similarity=0.338 Sum_probs=22.2
Q ss_pred eeEEEEeccCCCCCchHHH---HHHHHHHCCCEE--EeccC
Q 026476 40 LAVLLISDVYGYEAPNLRK---LADKVAAAGFYV--AVPDF 75 (238)
Q Consensus 40 ~~vl~~hg~~g~~~~~~~~---~a~~l~~~G~~v--~~~d~ 75 (238)
+.++++|.......+.+.. +++.+..++..+ ++|++
T Consensus 4 ~~iillhdVSpv~~~~~~~i~~~ide~~~~~~t~lLViPn~ 44 (233)
T COG3233 4 PLIILLHDVSPVYWPTLSNIDAAIDEYGAQNSTVLLVIPNH 44 (233)
T ss_pred cceEEEEecCcccchhHHHHHHHHHHhCCCCceEEEEeecc
Confidence 4789999987654455544 444444455555 56666
No 289
>TIGR00632 vsr DNA mismatch endonuclease Vsr. All proteins in this family for which functions are known are G:T mismatch endonucleases that function in a specialized mismatch repair process used usually to repair G:T mismatches in specific sections of the genome. This family was based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). Members of this family typically are found near to a DNA cytosine methyltransferase.
Probab=33.94 E-value=56 Score=22.75 Aligned_cols=17 Identities=18% Similarity=0.380 Sum_probs=13.1
Q ss_pred HHHHHHHHHCCCEEEec
Q 026476 57 RKLADKVAAAGFYVAVP 73 (238)
Q Consensus 57 ~~~a~~l~~~G~~v~~~ 73 (238)
...-..|.+.|+.|+.+
T Consensus 97 ~~~~~~L~~~Gw~Vlr~ 113 (117)
T TIGR00632 97 RRVNSRLQELGWRVLRV 113 (117)
T ss_pred HHHHHHHHHCcCEEEEE
Confidence 34566788899999875
No 290
>COG0400 Predicted esterase [General function prediction only]
Probab=33.18 E-value=1.7e+02 Score=22.68 Aligned_cols=45 Identities=20% Similarity=0.081 Sum_probs=32.1
Q ss_pred CCeeEEEEeccCCC--CCchHHHHHHHHHHCCCEEEeccCCCCCccC
Q 026476 38 SKLAVLLISDVYGY--EAPNLRKLADKVAAAGFYVAVPDFFHGDPYV 82 (238)
Q Consensus 38 ~~~~vl~~hg~~g~--~~~~~~~~a~~l~~~G~~v~~~d~~~g~~~~ 82 (238)
+.++|++.||-..- .......+.+.|.+.|+.|..-++.-||..+
T Consensus 145 ~~~pill~hG~~Dpvvp~~~~~~l~~~l~~~g~~v~~~~~~~GH~i~ 191 (207)
T COG0400 145 AGTPILLSHGTEDPVVPLALAEALAEYLTASGADVEVRWHEGGHEIP 191 (207)
T ss_pred CCCeEEEeccCcCCccCHHHHHHHHHHHHHcCCCEEEEEecCCCcCC
Confidence 45789999986542 2344567889999999999988873355543
No 291
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=33.18 E-value=1.3e+02 Score=26.29 Aligned_cols=28 Identities=18% Similarity=0.140 Sum_probs=24.6
Q ss_pred CCcEEEEecCCCCCCCHHhHHHHHHHHh
Q 026476 161 EVPLSILGAEIDRLSPPALVKEFEEALN 188 (238)
Q Consensus 161 ~~P~L~i~g~~D~~~p~~~~~~~~~~~~ 188 (238)
..++|+..|+.|-++|.-..+++.+.|.
T Consensus 347 ~irVLiY~Gd~D~icn~~Gt~~wi~~L~ 374 (433)
T PLN03016 347 GYRSLIYSGDHDIAVPFLATQAWIRSLN 374 (433)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhCC
Confidence 3699999999999999999888888873
No 292
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=32.60 E-value=48 Score=27.36 Aligned_cols=61 Identities=20% Similarity=0.141 Sum_probs=40.2
Q ss_pred chHHHHHHHHHHCCCEEEeccCCCCCccCCCCCcchHhhHhhcCCCcchhcHHHHHHHHHhcCCceEEEEEeeccHHHHH
Q 026476 54 PNLRKLADKVAAAGFYVAVPDFFHGDPYVADGGKPLQEWIKDHGVDKGFEEAKPVIQALKSKGITAIGAAGFCWGAKVVV 133 (238)
Q Consensus 54 ~~~~~~a~~l~~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~i~l~G~S~GG~~a~ 133 (238)
.++.++++.|.... ..++.+. .+.. .. --..+++.+.+++...=.++|-|+|+.++.
T Consensus 2 ~d~~rl~r~l~~~~-~gLvL~G---GG~R--------G~-----------ahiGvL~aLee~gi~~d~v~GtSaGAi~ga 58 (306)
T cd07225 2 SDFSRLARVLTGNS-IALVLGG---GGAR--------GC-----------AHIGVIKALEEAGIPVDMVGGTSIGAFIGA 58 (306)
T ss_pred ChHHHHHHHhcCCC-EEEEECC---hHHH--------HH-----------HHHHHHHHHHHcCCCCCEEEEECHHHHHHH
Confidence 35788899988875 3444443 2211 11 123466777777766667999999999999
Q ss_pred HccC
Q 026476 134 QLGK 137 (238)
Q Consensus 134 ~~a~ 137 (238)
.++.
T Consensus 59 ~ya~ 62 (306)
T cd07225 59 LYAE 62 (306)
T ss_pred HHHc
Confidence 9874
No 293
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=32.60 E-value=2.8e+02 Score=22.74 Aligned_cols=34 Identities=18% Similarity=0.078 Sum_probs=23.3
Q ss_pred CceEEEEEeeccHHHHHHccC-----CcCceEEEEeccC
Q 026476 117 ITAIGAAGFCWGAKVVVQLGK-----REFIQAAVLLHPS 150 (238)
Q Consensus 117 ~~~i~l~G~S~GG~~a~~~a~-----~~~i~a~i~~~~~ 150 (238)
-.|+.+.|-|+|+.-+...-. ...+.+++...++
T Consensus 108 RPkL~l~GeSLGa~g~~~af~~~~~~~~~vdGalw~GpP 146 (289)
T PF10081_consen 108 RPKLYLYGESLGAYGGEAAFDGLDDLRDRVDGALWVGPP 146 (289)
T ss_pred CCeEEEeccCccccchhhhhccHHHhhhhcceEEEeCCC
Confidence 458999999999988876432 1256666655443
No 294
>PF04084 ORC2: Origin recognition complex subunit 2 ; InterPro: IPR007220 The Origin Recognition Complex (ORC) is a six-subunit ATP-dependent DNA-binding complex encoded in yeast by ORC1-6 []. ORC is a central component for eukaryotic DNA replication, and binds chromatin at replication origins throughout the cell cycle []. ORC directs DNA replication throughout the genome and is required for its initiation [, , ]. ORC bound at replication origins serves as the foundation for assembly of the pre-replicative complex (pre-RC), which includes Cdc6, Tah11 (aka Cdt1), and the Mcm2-7 complex [, , ]. Pre-RC assembly during G1 is required for replication licensing of chromosomes prior to DNA synthesis during S phase [, , ]. Cell cycle-regulated phosphorylation of Orc2, Orc6, Cdc6, and MCM by the cyclin-dependent protein kinase Cdc28 regulates initiation of DNA replication, including blocking reinitiation in G2/M phase [, , , ]. In yeast, ORC also plays a role in the establishment of silencing at the mating-type loci Hidden MAT Left (HML) and Hidden MAT Right (HMR) [, , ]. ORC participates in the assembly of transcriptionally silent chromatin at HML and HMR by recruiting the Sir1 silencing protein to the HML and HMR silencers [, , ]. Both Orc1 and Orc5 bind ATP, though only Orc1 has ATPase activity []. The binding of ATP by Orc1 is required for ORC binding to DNA and is essential for cell viability []. The ATPase activity of Orc1 is involved in formation of the pre-RC [, , ]. ATP binding by Orc5 is crucial for the stability of ORC as a whole. Only the Orc1-5 subunits are required for origin binding; Orc6 is essential for maintenance of pre-RCs once formed []. Interactions within ORC suggest that Orc2-3-6 may form a core complex []. ORC homologues have been found in various eukaryotes, including fission yeast, insects, amphibians, and humans []. This entry represents subunit 2, which binds the origin of replication. It plays a role in chromosome replication and mating type transcriptional silencing.; GO: 0006260 DNA replication, 0000808 origin recognition complex, 0005634 nucleus
Probab=32.52 E-value=2.5e+02 Score=23.48 Aligned_cols=102 Identities=15% Similarity=0.062 Sum_probs=55.3
Q ss_pred EEEeccCCCCCchHHHHHHHHHHCC--CEEEeccCC-CCCccCCCC-CcchHhhH-hh--cCCCcchhcHHHHHHHHHhc
Q 026476 43 LLISDVYGYEAPNLRKLADKVAAAG--FYVAVPDFF-HGDPYVADG-GKPLQEWI-KD--HGVDKGFEEAKPVIQALKSK 115 (238)
Q Consensus 43 l~~hg~~g~~~~~~~~~a~~l~~~G--~~v~~~d~~-~g~~~~~~~-~~~~~~~~-~~--~~~~~~~~d~~~~~~~l~~~ 115 (238)
|+++|. |+...-+..+++.+.... ..|++++.| ++.. ... -......+ .. .......+.+..+++.++..
T Consensus 57 lL~YG~-GSKr~lL~~Fa~~~l~~~~~~~~vvvnGy~p~~~--~k~il~~I~~~l~~~~~~~~~~~~~~~~~i~~~l~~~ 133 (326)
T PF04084_consen 57 LLFYGY-GSKRKLLNDFAEKYLSDWGDGPVVVVNGYFPSLS--IKDILNTIEEALLPEPSKKPKSPSEQLDFIISYLESR 133 (326)
T ss_pred EEEEec-ChHHHHHHHHHHHHhhccCCCcEEEEEccCCCCc--HHHHHHHHHHHHhhhcccccCCHHHHHHHHHHHHhcc
Confidence 677875 544467788888888773 566666653 2221 110 00111111 11 12233444555666777666
Q ss_pred C-CceEEEEEeeccHHH--------HHH-ccCCcCceEEEEe
Q 026476 116 G-ITAIGAAGFCWGAKV--------VVQ-LGKREFIQAAVLL 147 (238)
Q Consensus 116 ~-~~~i~l~G~S~GG~~--------a~~-~a~~~~i~a~i~~ 147 (238)
. ..++.++=|+.=|-. ++. +|+-|.|.-++.+
T Consensus 134 ~~~~~l~lvIHnIDg~~LR~~~~Q~~La~LA~~p~I~lIASi 175 (326)
T PF04084_consen 134 PSPPPLYLVIHNIDGPSLRNEKAQSLLAQLASIPNIHLIASI 175 (326)
T ss_pred CCCCceEEEEECCCChhhcChHHHHHHHHHHcCCCeEEEEec
Confidence 4 678999988876655 112 4455666665554
No 295
>cd08551 Fe-ADH iron-containing alcohol dehydrogenases (Fe-ADH)-like. Large metal-containing alcohol dehydrogenases (ADH), known as iron-containing alcohol dehydrogenases. They contain a dehydroquinate synthase-like protein structural fold and mostly contain iron. They are distinct from other alcohol dehydrogenases which contains different protein domains. There are several distinct families of alcohol dehydrogenases: Zinc-containing long-chain alcohol dehydrogenases; insect-type, or short-chain alcohol dehydrogenases; iron-containing alcohol dehydrogenases, and others. The iron-containing family has a Rossmann fold-like topology that resembles the fold of the zinc-dependent alcohol dehydrogenases, but lacks sequence homology, and differs in strand arrangement. ADH catalyzes the reversible oxidation of alcohol to acetaldehyde with the simultaneous reduction of NAD(P)+ to NAD(P)H.
Probab=32.41 E-value=3e+02 Score=23.22 Aligned_cols=65 Identities=22% Similarity=0.303 Sum_probs=38.8
Q ss_pred eeEEEEeccCCCCCchHHHHHHHHHHCCCEEEeccCCCCCccCCCCCcchHhhHhhcCCCcchhcHHHHHHHHHhcCCce
Q 026476 40 LAVLLISDVYGYEAPNLRKLADKVAAAGFYVAVPDFFHGDPYVADGGKPLQEWIKDHGVDKGFEEAKPVIQALKSKGITA 119 (238)
Q Consensus 40 ~~vl~~hg~~g~~~~~~~~~a~~l~~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~ 119 (238)
..++++.+..-........+...|.++|+.+..++...+.. ..+++.++++.+++.+.+-
T Consensus 24 ~~~lvv~~~~~~~~~~~~~v~~~L~~~~~~~~~~~~~~~~p--------------------~~~~v~~~~~~~~~~~~d~ 83 (370)
T cd08551 24 RKALIVTDPGLVKTGVLDKVIDSLKEAGIEVVIFDGVEPNP--------------------TLSNVDAAVAAYREEGCDG 83 (370)
T ss_pred CeEEEEeCcchhhCccHHHHHHHHHHcCCeEEEECCCCCCC--------------------CHHHHHHHHHHHHhcCCCE
Confidence 34556665433222455678888888888777665311111 2467788888887766665
Q ss_pred EEEEE
Q 026476 120 IGAAG 124 (238)
Q Consensus 120 i~l~G 124 (238)
|..+|
T Consensus 84 IiaiG 88 (370)
T cd08551 84 VIAVG 88 (370)
T ss_pred EEEeC
Confidence 55443
No 296
>PRK13705 plasmid-partitioning protein SopA; Provisional
Probab=32.40 E-value=60 Score=27.81 Aligned_cols=35 Identities=17% Similarity=0.051 Sum_probs=24.4
Q ss_pred eeEEEEe---ccCCCCCchHHHHHHHHHHCCCEEEeccC
Q 026476 40 LAVLLIS---DVYGYEAPNLRKLADKVAAAGFYVAVPDF 75 (238)
Q Consensus 40 ~~vl~~h---g~~g~~~~~~~~~a~~l~~~G~~v~~~d~ 75 (238)
+.||-+. |+.|.. .-...+|..|+.+|+.|+++|.
T Consensus 106 ~~vIai~n~KGGVGKT-T~a~nLA~~LA~~G~rVLlID~ 143 (388)
T PRK13705 106 PPVIGVAAHKGGVYKT-SVSVHLAQDLALKGLRVLLVEG 143 (388)
T ss_pred CeEEEEECCCCCchHH-HHHHHHHHHHHhcCCCeEEEcC
Confidence 4455555 333432 3346899999999999999994
No 297
>PF07582 AP_endonuc_2_N: AP endonuclease family 2 C terminus; InterPro: IPR011418 DNA damaging agents such as the anti-tumour drugs bleomycin and neocarzinostatin or those that generate oxygen radicals produce a variety of lesions in DNA. Amongst these is base-loss which forms apurinic/apyrimidinic (AP) sites or strand breaks with atypical 3' termini. DNA repair at the AP sites is initiated by specific endonuclease cleavage of the phosphodiester backbone. Such endonucleases are also generally capable of removing blocking groups from the 3' terminus of DNA strand breaks. AP endonucleases can be classified into two families based on sequence similarity []. This entry represents a highly-conserved sequence found at the C terminus of several apurinic/apyrimidinic (AP) endonucleases in a range of Gram-positive and Gram-negative bacteria. ; PDB: 3LMZ_A 2ZDS_D.
Probab=31.84 E-value=1.1e+02 Score=18.02 Aligned_cols=41 Identities=10% Similarity=0.072 Sum_probs=24.6
Q ss_pred HHHHHHHHHHCCCE-EEeccCCCCCccCCCCCcchHhhHhhcCCCcchhcHHHHHHHHHhc
Q 026476 56 LRKLADKVAAAGFY-VAVPDFFHGDPYVADGGKPLQEWIKDHGVDKGFEEAKPVIQALKSK 115 (238)
Q Consensus 56 ~~~~a~~l~~~G~~-v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~ 115 (238)
+..+...|...||. ++++++ .-.. ....+.+...++++++.
T Consensus 2 w~~i~~~L~~~GYdG~~siE~-ED~~------------------~~~~~G~~~a~~~lr~~ 43 (55)
T PF07582_consen 2 WKRIFSALREIGYDGWLSIEH-EDAL------------------MDPEEGAREAAAFLRKL 43 (55)
T ss_dssp HHHHHHHHHHTT--SEEEE----STT------------------TSHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHcCCCceEEEEe-ecCC------------------CCHHHHHHHHHHHHHHh
Confidence 46788889999988 778886 2111 12345677788888775
No 298
>cd08189 Fe-ADH5 Iron-containing alcohol dehydrogenases-like. Iron-containing alcohol dehydrogenase-like. Alcohol dehydrogenase catalyzes the reduction of acetaldehyde to alcohol with NADP as cofactor. Its activity requires iron ions. The protein structure represents a dehydroquinate synthase-like fold and belongs to the alcohol dehydrogenase-like superfamily. They are distinct from other alcohol dehydrogenases which contains different protein domain. Proteins of this family have not been characterized. Their specific function is unknown.
Probab=31.76 E-value=2.6e+02 Score=23.66 Aligned_cols=65 Identities=26% Similarity=0.246 Sum_probs=39.2
Q ss_pred eeEEEEeccCCCCCchHHHHHHHHHHCCCEEEeccCCCCCccCCCCCcchHhhHhhcCCCcchhcHHHHHHHHHhcCCce
Q 026476 40 LAVLLISDVYGYEAPNLRKLADKVAAAGFYVAVPDFFHGDPYVADGGKPLQEWIKDHGVDKGFEEAKPVIQALKSKGITA 119 (238)
Q Consensus 40 ~~vl~~hg~~g~~~~~~~~~a~~l~~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~ 119 (238)
..++++.+..-.+...+..+...|.+.|+.+..+|..... -..+.+.++++.+++.+.+-
T Consensus 27 ~~~lvvt~~~~~~~g~~~~v~~~L~~~g~~~~~~~~v~~~--------------------p~~~~v~~~~~~~~~~~~d~ 86 (374)
T cd08189 27 KKVLIVTDKGLVKLGLLDKVLEALEGAGIEYAVYDGVPPD--------------------PTIENVEAGLALYRENGCDA 86 (374)
T ss_pred CeEEEEeCcchhhcccHHHHHHHHHhcCCeEEEeCCCCCC--------------------cCHHHHHHHHHHHHhcCCCE
Confidence 3566666643222234567888888888877766541111 12356788888888776665
Q ss_pred EEEEE
Q 026476 120 IGAAG 124 (238)
Q Consensus 120 i~l~G 124 (238)
|..+|
T Consensus 87 IIaiG 91 (374)
T cd08189 87 ILAVG 91 (374)
T ss_pred EEEeC
Confidence 55443
No 299
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=31.44 E-value=1e+02 Score=24.25 Aligned_cols=35 Identities=20% Similarity=0.110 Sum_probs=23.9
Q ss_pred CeeEEEEeccCCCCCchHHHHHHHHHHCCCEEEeccC
Q 026476 39 KLAVLLISDVYGYEAPNLRKLADKVAAAGFYVAVPDF 75 (238)
Q Consensus 39 ~~~vl~~hg~~g~~~~~~~~~a~~l~~~G~~v~~~d~ 75 (238)
.+..|++.|.... .--..++..|++.||.|++-..
T Consensus 6 ~~k~VlItgcs~G--GIG~ala~ef~~~G~~V~AtaR 40 (289)
T KOG1209|consen 6 QPKKVLITGCSSG--GIGYALAKEFARNGYLVYATAR 40 (289)
T ss_pred CCCeEEEeecCCc--chhHHHHHHHHhCCeEEEEEcc
Confidence 3456666654322 1236899999999999998664
No 300
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc
Probab=30.69 E-value=67 Score=23.68 Aligned_cols=32 Identities=28% Similarity=0.217 Sum_probs=23.8
Q ss_pred HHHHHHHHhcCCceEEEEEeeccHHHHHHccC
Q 026476 106 KPVIQALKSKGITAIGAAGFCWGAKVVVQLGK 137 (238)
Q Consensus 106 ~~~~~~l~~~~~~~i~l~G~S~GG~~a~~~a~ 137 (238)
..+++.+.+++...=.++|-|.|+.++..++.
T Consensus 16 ~Gvl~~L~~~~~~~d~i~GtSaGal~a~~~a~ 47 (175)
T cd07205 16 IGVLKALEEAGIPIDIVSGTSAGAIVGALYAA 47 (175)
T ss_pred HHHHHHHHHcCCCeeEEEEECHHHHHHHHHHc
Confidence 34556666655455579999999999999874
No 301
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=30.55 E-value=61 Score=25.24 Aligned_cols=31 Identities=23% Similarity=0.200 Sum_probs=23.3
Q ss_pred HHHHHHHhcCCceEEEEEeeccHHHHHHccC
Q 026476 107 PVIQALKSKGITAIGAAGFCWGAKVVVQLGK 137 (238)
Q Consensus 107 ~~~~~l~~~~~~~i~l~G~S~GG~~a~~~a~ 137 (238)
.+++.+.+.+...-.+.|-|.|+.++..++.
T Consensus 17 GvL~aL~e~gi~~~~i~GtSaGAi~aa~~a~ 47 (221)
T cd07210 17 GFLAALLEMGLEPSAISGTSAGALVGGLFAS 47 (221)
T ss_pred HHHHHHHHcCCCceEEEEeCHHHHHHHHHHc
Confidence 3555666655555579999999999999874
No 302
>COG3727 Vsr DNA G:T-mismatch repair endonuclease [DNA replication, recombination, and repair]
Probab=30.22 E-value=1e+02 Score=22.06 Aligned_cols=16 Identities=19% Similarity=0.283 Sum_probs=12.3
Q ss_pred HHHHHHHHCCCEEEec
Q 026476 58 KLADKVAAAGFYVAVP 73 (238)
Q Consensus 58 ~~a~~l~~~G~~v~~~ 73 (238)
.....|.+.|+.|+++
T Consensus 99 r~~~~L~~~GwrvlvV 114 (150)
T COG3727 99 RDIKRLQQLGWRVLVV 114 (150)
T ss_pred HHHHHHHHcCCeEEEE
Confidence 4556688899999875
No 303
>cd05312 NAD_bind_1_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 1. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists of eukaryotic and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH
Probab=30.21 E-value=1.4e+02 Score=24.42 Aligned_cols=71 Identities=11% Similarity=0.080 Sum_probs=36.8
Q ss_pred HHHHHHHHHCCC-------EEEeccCCCCCccCCCC--CcchHhhHhhcCCCcchhcHHHHHHHHHhcCCceEEEEEee-
Q 026476 57 RKLADKVAAAGF-------YVAVPDFFHGDPYVADG--GKPLQEWIKDHGVDKGFEEAKPVIQALKSKGITAIGAAGFC- 126 (238)
Q Consensus 57 ~~~a~~l~~~G~-------~v~~~d~~~g~~~~~~~--~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~i~l~G~S- 126 (238)
+.+.+.+.+.|. .++..|. +|-=..... ......+...... ....++.++++.+ ++-.++|.|
T Consensus 42 ~ll~~~~~~~G~~~eeA~~~i~~vD~-~Gll~~~r~~l~~~~~~~a~~~~~-~~~~~L~e~i~~v-----~ptvlIG~S~ 114 (279)
T cd05312 42 DLIVSAMVREGLSEEEARKKIWLVDS-KGLLTKDRKDLTPFKKPFARKDEE-KEGKSLLEVVKAV-----KPTVLIGLSG 114 (279)
T ss_pred HHHHHHHHHcCCChhhccCeEEEEcC-CCeEeCCCCcchHHHHHHHhhcCc-ccCCCHHHHHHhc-----CCCEEEEeCC
Confidence 445555666688 7899998 775222111 1111122222111 1234566665544 345799999
Q ss_pred ccHHHHHH
Q 026476 127 WGAKVVVQ 134 (238)
Q Consensus 127 ~GG~~a~~ 134 (238)
.||.+.-.
T Consensus 115 ~~g~ft~e 122 (279)
T cd05312 115 VGGAFTEE 122 (279)
T ss_pred CCCCCCHH
Confidence 47765544
No 304
>cd08192 Fe-ADH7 Iron-containing alcohol dehydrogenases-like, involved in the linear alkylbenzenesulfonate (LAS) degradation pathway. NAD-dependent iron-containing alcohol dehydrogenase-like. Proteins in this family are NAD-dependent alcohol dehydrogenases which are involved in the linear alkylbenzenesulfonate (LAS) degradation pathway. They catalyze the oxidation of beta-hydroxy CoA ester to beta-oxo CoA ester, which then be subject to CoA-dependent thiolysis to yield acetyl-CoA and 6-C8-SPC-CoA. The major laundry surfactant in worldwide use is commercial linear alkylbenzenesulfonate (LAS) which contains 20 congeners of linear alkanes (C10 to C13). LAS is fully biodegradable in oxic environments. Degradation involves microbial communities. Parvibaculum lavamentivorans DS-1T is a representative member of many heterotrophic, LAS-degrading communities, in which it catalyzes the first steps of LAS degradation. Strain DS-1T is a small heterotrophic bacterium able to omega-oxygenate the comm
Probab=30.13 E-value=3.1e+02 Score=23.18 Aligned_cols=64 Identities=17% Similarity=0.152 Sum_probs=38.6
Q ss_pred eEEEEeccCCCCCchHHHHHHHHHHCCCEEEeccCCCCCccCCCCCcchHhhHhhcCCCcchhcHHHHHHHHHhcCCceE
Q 026476 41 AVLLISDVYGYEAPNLRKLADKVAAAGFYVAVPDFFHGDPYVADGGKPLQEWIKDHGVDKGFEEAKPVIQALKSKGITAI 120 (238)
Q Consensus 41 ~vl~~hg~~g~~~~~~~~~a~~l~~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~i 120 (238)
.++++.+..-........+.+.|.+.|+.+..++...... ..+.+.++++.+++.+.+-|
T Consensus 26 ~~liv~~~~~~~~~~~~~v~~~L~~~g~~~~~~~~v~~~p--------------------~~~~v~~~~~~~~~~~~d~I 85 (370)
T cd08192 26 RPLIVTDPGLAALGLVARVLALLEDAGLAAALFDEVPPNP--------------------TEAAVEAGLAAYRAGGCDGV 85 (370)
T ss_pred eEEEEcCcchhhCccHHHHHHHHHHcCCeEEEeCCCCCCC--------------------CHHHHHHHHHHHHhcCCCEE
Confidence 4556665322222356778888888888877765311111 23567778888877766665
Q ss_pred EEEE
Q 026476 121 GAAG 124 (238)
Q Consensus 121 ~l~G 124 (238)
.-+|
T Consensus 86 IaiG 89 (370)
T cd08192 86 IAFG 89 (370)
T ss_pred EEeC
Confidence 5444
No 305
>COG0552 FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=29.95 E-value=1.2e+02 Score=25.36 Aligned_cols=39 Identities=26% Similarity=0.267 Sum_probs=29.9
Q ss_pred CCCeeEEEEeccCCCC-CchHHHHHHHHHHCCCEEEeccC
Q 026476 37 DSKLAVLLISDVYGYE-APNLRKLADKVAAAGFYVAVPDF 75 (238)
Q Consensus 37 ~~~~~vl~~hg~~g~~-~~~~~~~a~~l~~~G~~v~~~d~ 75 (238)
.++|.|+++-|.-|.. .....-+|.+|-++|+.|+..-.
T Consensus 136 ~~~p~Vil~vGVNG~GKTTTIaKLA~~l~~~g~~VllaA~ 175 (340)
T COG0552 136 EKKPFVILFVGVNGVGKTTTIAKLAKYLKQQGKSVLLAAG 175 (340)
T ss_pred CCCcEEEEEEecCCCchHhHHHHHHHHHHHCCCeEEEEec
Confidence 3568899999977642 34567899999999999997653
No 306
>COG1255 Uncharacterized protein conserved in archaea [Function unknown]
Probab=29.95 E-value=59 Score=22.66 Aligned_cols=22 Identities=27% Similarity=0.388 Sum_probs=19.6
Q ss_pred chHHHHHHHHHHCCCEEEeccC
Q 026476 54 PNLRKLADKVAAAGFYVAVPDF 75 (238)
Q Consensus 54 ~~~~~~a~~l~~~G~~v~~~d~ 75 (238)
..+..+|+.|+++||.|++.|-
T Consensus 23 G~~~~VA~~L~e~g~dv~atDI 44 (129)
T COG1255 23 GFFLDVAKRLAERGFDVLATDI 44 (129)
T ss_pred chHHHHHHHHHHcCCcEEEEec
Confidence 3467899999999999999997
No 307
>cd08178 AAD_C C-terminal alcohol dehydrogenase domain of the acetaldehyde dehydrogenase-alcohol dehydrogenase bifunctional two-domain protein (AAD). Alcohol dehydrogenase domain located on the C-terminal of a bifunctional two-domain protein. The N-terminal of the protein contains an acetaldehyde-CoA dehydrogenase domain. This protein is involved in pyruvate metabolism. Pyruvate is converted to acetyl-CoA and formate by pyruvate formate-lysase (PFL). Under anaerobic condition, acetyl-CoA is reduced to acetaldehyde and ethanol by this two-domain protein. Acetyl-CoA is first converted into an enzyme-bound thiohemiacetal by the N-terminal acetaldehyde dehydrogenase domain. The enzyme-bound thiohemiacetal is subsequently reduced by the C-terminal NAD+-dependent alcohol dehydrogenase domain. In E. coli, this protein is called AdhE and was shown pyruvate formate-lysase (PFL) deactivase activity, which is involved in the inactivation of PFL, a key enzyme in anaerobic metabolism. In Escherichi
Probab=29.78 E-value=2.1e+02 Score=24.52 Aligned_cols=64 Identities=19% Similarity=0.229 Sum_probs=38.8
Q ss_pred eEEEEeccCCCCCchHHHHHHHHHHCCCEEEeccCCCCCccCCCCCcchHhhHhhcCCCcchhcHHHHHHHHHhcCCceE
Q 026476 41 AVLLISDVYGYEAPNLRKLADKVAAAGFYVAVPDFFHGDPYVADGGKPLQEWIKDHGVDKGFEEAKPVIQALKSKGITAI 120 (238)
Q Consensus 41 ~vl~~hg~~g~~~~~~~~~a~~l~~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~i 120 (238)
.++++.+..-........+.+.|.+.|+.+..++-..... ..+.+.++++.+++.+.+-|
T Consensus 23 k~liVtd~~~~~~g~~~~v~~~L~~~gi~~~~f~~v~~~p--------------------~~~~v~~~~~~~~~~~~D~I 82 (398)
T cd08178 23 RAFIVTDRFMVKLGYVDKVIDVLKRRGVETEVFSDVEPDP--------------------SLETVRKGLELMNSFKPDTI 82 (398)
T ss_pred eEEEEcChhHHhCccHHHHHHHHHHCCCeEEEecCCCCCc--------------------CHHHHHHHHHHHHhcCCCEE
Confidence 4566665322222356778888988998887766311111 23567778888887766655
Q ss_pred EEEE
Q 026476 121 GAAG 124 (238)
Q Consensus 121 ~l~G 124 (238)
..+|
T Consensus 83 IaiG 86 (398)
T cd08178 83 IALG 86 (398)
T ss_pred EEeC
Confidence 5444
No 308
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=29.31 E-value=1e+02 Score=27.32 Aligned_cols=38 Identities=8% Similarity=0.128 Sum_probs=27.0
Q ss_pred CcchhcHHHHHHHHHh----cC--CceEEEEEeeccHHHHHHcc
Q 026476 99 DKGFEEAKPVIQALKS----KG--ITAIGAAGFCWGAKVVVQLG 136 (238)
Q Consensus 99 ~~~~~d~~~~~~~l~~----~~--~~~i~l~G~S~GG~~a~~~a 136 (238)
....+|+..+.+.+.. .. ..+..|+|-|+||.-+..+|
T Consensus 173 ~~~~~D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A 216 (498)
T COG2939 173 EGAGKDVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFA 216 (498)
T ss_pred hccchhHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHH
Confidence 4455676666665533 32 34899999999999888876
No 309
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=29.25 E-value=64 Score=24.90 Aligned_cols=32 Identities=25% Similarity=0.195 Sum_probs=24.3
Q ss_pred HHHHHHHhcCCceEEEEEeeccHHHHHHccCC
Q 026476 107 PVIQALKSKGITAIGAAGFCWGAKVVVQLGKR 138 (238)
Q Consensus 107 ~~~~~l~~~~~~~i~l~G~S~GG~~a~~~a~~ 138 (238)
.+++.+.+.+..-=.+.|-|.|+..+..++..
T Consensus 15 Gvl~aL~e~g~~~d~i~GtS~GAl~aa~~a~~ 46 (215)
T cd07209 15 GVLKALAEAGIEPDIISGTSIGAINGALIAGG 46 (215)
T ss_pred HHHHHHHHcCCCCCEEEEECHHHHHHHHHHcC
Confidence 35566666665555799999999999998853
No 310
>cd08185 Fe-ADH1 Iron-containing alcohol dehydrogenases-like. Iron-containing alcohol dehydrogenases-like (ADH). Alcohol dehydrogenase catalyzes the reduction of acetaldehyde to alcohol with NADP as cofactor. Its activity requires iron ions. The protein structure represents a dehydroquinate synthase fold and is a member of the iron-containing alcohol dehydrogenase-like family. They are distinct from other alcohol dehydrogenases which contain different protein domains. Proteins of this family have not been characterized. Their specific function is unknown. They are present in bacteria and archaea.
Probab=29.17 E-value=3.1e+02 Score=23.30 Aligned_cols=65 Identities=15% Similarity=0.155 Sum_probs=40.9
Q ss_pred eeEEEEeccCC-CCCchHHHHHHHHHHCCCEEEeccCCCCCccCCCCCcchHhhHhhcCCCcchhcHHHHHHHHHhcCCc
Q 026476 40 LAVLLISDVYG-YEAPNLRKLADKVAAAGFYVAVPDFFHGDPYVADGGKPLQEWIKDHGVDKGFEEAKPVIQALKSKGIT 118 (238)
Q Consensus 40 ~~vl~~hg~~g-~~~~~~~~~a~~l~~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~ 118 (238)
..++++++... .....+..+...|.+.|..+..++-....+ ..+++.++++.+++.+.+
T Consensus 26 ~r~livt~~~~~~~~g~~~~v~~~L~~~~~~~~~~~~v~~~p--------------------~~~~v~~~~~~~~~~~~D 85 (380)
T cd08185 26 KKALIVTGNGSSKKTGYLDRVIELLKQAGVEVVVFDKVEPNP--------------------TTTTVMEGAALAREEGCD 85 (380)
T ss_pred CeEEEEeCCCchhhccHHHHHHHHHHHcCCeEEEeCCccCCC--------------------CHHHHHHHHHHHHHcCCC
Confidence 45777777443 123456778888888888877665311111 235677788888877666
Q ss_pred eEEEEE
Q 026476 119 AIGAAG 124 (238)
Q Consensus 119 ~i~l~G 124 (238)
-|.-+|
T Consensus 86 ~IiavG 91 (380)
T cd08185 86 FVVGLG 91 (380)
T ss_pred EEEEeC
Confidence 665554
No 311
>cd03413 CbiK_C Anaerobic cobalamin biosynthetic cobalt chelatase (CbiK), C-terminal domain. CbiK is part of the cobalt-early path for cobalamin biosynthesis. It catalyzes the insertion of cobalt into the oxidized form of precorrin-2, factor II (sirohydrochlorin), the second step of the anaerobic branch of vitamin B12 biosynthesis. CbiK belongs to the class II family of chelatases, and is a homomeric enzyme that does not require ATP for its enzymatic activity.
Probab=29.05 E-value=1.8e+02 Score=19.50 Aligned_cols=27 Identities=7% Similarity=-0.069 Sum_probs=16.5
Q ss_pred eEEEEeccCCCCCchHHHHHHHHHHCC
Q 026476 41 AVLLISDVYGYEAPNLRKLADKVAAAG 67 (238)
Q Consensus 41 ~vl~~hg~~g~~~~~~~~~a~~l~~~G 67 (238)
.|++-||........+..+++.+.+++
T Consensus 3 illvgHGSr~~~~~~~~~l~~~l~~~~ 29 (103)
T cd03413 3 VVFMGHGTDHPSNAVYAALEYVLREED 29 (103)
T ss_pred EEEEECCCCchhhhHHHHHHHHHHhcC
Confidence 345557655432356778888887664
No 312
>PF06180 CbiK: Cobalt chelatase (CbiK); InterPro: IPR010388 This group, typified by Salmonella typhimurium CbiK, contains anaerobic cobalt chelatases that act in the anaerobic cobalamin biosynthesis pathway [, ]. Cobalamin (vitamin B12) can be complexed with metal via ATP-dependent reactions (aerobic pathway) (e.g., in Pseudomonas denitrificans) or via ATP-independent reactions (anaerobic pathway) (e.g., in S. typhimurium) [, ]. The corresponding cobalt chelatases are not homologous. This group belongs to the class of ATP-independent, single-subunit chelatases that also includes distantly related protoporphyrin IX (PPIX) ferrochelatase (HemH) (Class II chelatases) []. The structure of S. typhimurium CbiK shows that it has a remarkably similar topology to Bacillus subtilis ferrochelatase despite only weak sequence conservation []. Both enzymes contain a histidine residue identified as the metal ion ligand, but CbiK contains a second histidine in place of the glutamic acid residue identified as a general base in PPIX ferrochelatase []. Site-directed mutagenesis has confirmed a role for this histidine and a nearby glutamic acid in cobalt binding, modulating metal ion specificity as well as catalytic efficiency []. It should be noted that CysG and Met8p, which are multifunctional proteins associated with siroheme biosynthesis, include chelatase activity and can therefore be considered as the third class of chelatases []. As with the class II chelatases, they do not require ATP for activity. However, they are not structurally similar to HemH or CbiK, and it is likely that they have arisen by the acquisition of a chelatase function within a dehydrogenase catalytic framework [, ].; GO: 0016852 sirohydrochlorin cobaltochelatase activity; PDB: 1QGO_A 2XWP_A 2XVZ_A 2XVX_A 2XVY_A.
Probab=28.98 E-value=1.4e+02 Score=24.05 Aligned_cols=60 Identities=23% Similarity=0.225 Sum_probs=30.4
Q ss_pred eeEEEEeccCCCCCchHHHHHHHHHHCCCE-EEeccCCCCCccCCCCCcchHhhHhhcCCCcchhcHHHHHHHHHhcCCc
Q 026476 40 LAVLLISDVYGYEAPNLRKLADKVAAAGFY-VAVPDFFHGDPYVADGGKPLQEWIKDHGVDKGFEEAKPVIQALKSKGIT 118 (238)
Q Consensus 40 ~~vl~~hg~~g~~~~~~~~~a~~l~~~G~~-v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~ 118 (238)
..|++-||........|..+...|.+.|+. |++--. .|. .++..+++.+++.+..
T Consensus 143 a~vlmGHGt~h~an~~Y~~l~~~l~~~~~~~v~vgtv-EG~-----------------------P~~~~vi~~L~~~g~k 198 (262)
T PF06180_consen 143 AVVLMGHGTPHPANAAYSALQAMLKKHGYPNVFVGTV-EGY-----------------------PSLEDVIARLKKKGIK 198 (262)
T ss_dssp EEEEEE---SCHHHHHHHHHHHHHHCCT-TTEEEEET-TSS-----------------------SBHHHHHHHHHHHT-S
T ss_pred EEEEEeCCCCCCccHHHHHHHHHHHhCCCCeEEEEEe-CCC-----------------------CCHHHHHHHHHhcCCC
Confidence 445556664432234566777778777632 333222 221 1356677777776666
Q ss_pred eEEEE
Q 026476 119 AIGAA 123 (238)
Q Consensus 119 ~i~l~ 123 (238)
+|.|+
T Consensus 199 ~V~L~ 203 (262)
T PF06180_consen 199 KVHLI 203 (262)
T ss_dssp EEEEE
T ss_pred eEEEE
Confidence 65554
No 313
>cd05014 SIS_Kpsf KpsF-like protein. KpsF is an arabinose-5-phosphate isomerase which contains SIS (Sugar ISomerase) domains. SIS domains are found in many phosphosugar isomerases and phosphosugar binding proteins. KpsF catalyzes the reversible reaction of ribulose 5-phosphate to arabinose 5-phosphate. This is the second step in the CMP-Kdo biosynthesis pathway.
Probab=28.85 E-value=1.7e+02 Score=19.95 Aligned_cols=31 Identities=16% Similarity=0.148 Sum_probs=18.7
Q ss_pred EEEeccCCCCCchHHHHHHHHHHCCCEEEecc
Q 026476 43 LLISDVYGYEAPNLRKLADKVAAAGFYVAVPD 74 (238)
Q Consensus 43 l~~hg~~g~~~~~~~~~a~~l~~~G~~v~~~d 74 (238)
|++.|.+++. .....+...|...|..+...+
T Consensus 3 I~i~G~G~S~-~~a~~~~~~l~~~g~~~~~~~ 33 (128)
T cd05014 3 VVVTGVGKSG-HIARKIAATLSSTGTPAFFLH 33 (128)
T ss_pred EEEEeCcHhH-HHHHHHHHHhhcCCCceEEcc
Confidence 4555554432 344567777777787777664
No 314
>PLN02209 serine carboxypeptidase
Probab=28.67 E-value=85 Score=27.39 Aligned_cols=20 Identities=15% Similarity=0.122 Sum_probs=16.3
Q ss_pred CceEEEEEeeccHHHHHHcc
Q 026476 117 ITAIGAAGFCWGAKVVVQLG 136 (238)
Q Consensus 117 ~~~i~l~G~S~GG~~a~~~a 136 (238)
..++.+.|-|+||..+-.+|
T Consensus 166 ~~~~yi~GESYaG~yvP~~a 185 (437)
T PLN02209 166 SNPFYVVGDSYSGMIVPALV 185 (437)
T ss_pred CCCEEEEecCcCceehHHHH
Confidence 35899999999998766655
No 315
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=28.43 E-value=1e+02 Score=25.60 Aligned_cols=31 Identities=23% Similarity=0.326 Sum_probs=24.3
Q ss_pred EEEeccCCCCCchHHHHHHHHHHCCCEEEeccCC
Q 026476 43 LLISDVYGYEAPNLRKLADKVAAAGFYVAVPDFF 76 (238)
Q Consensus 43 l~~hg~~g~~~~~~~~~a~~l~~~G~~v~~~d~~ 76 (238)
|++.|+.|. .. ...+..|.+.||.|+++|.+
T Consensus 3 iLVtGGAGY-IG--SHtv~~Ll~~G~~vvV~DNL 33 (329)
T COG1087 3 VLVTGGAGY-IG--SHTVRQLLKTGHEVVVLDNL 33 (329)
T ss_pred EEEecCcch-hH--HHHHHHHHHCCCeEEEEecC
Confidence 667777775 22 46788899999999999985
No 316
>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=28.34 E-value=58 Score=26.72 Aligned_cols=30 Identities=33% Similarity=0.328 Sum_probs=25.0
Q ss_pred HHHHHHhcCCceEEEEEeeccHHHHHHccC
Q 026476 108 VIQALKSKGITAIGAAGFCWGAKVVVQLGK 137 (238)
Q Consensus 108 ~~~~l~~~~~~~i~l~G~S~GG~~a~~~a~ 137 (238)
+++.|.+.+...-.+.|-|+|+.++..+|.
T Consensus 29 Vl~aL~e~gi~~~~iaGtS~GAiva~l~A~ 58 (306)
T COG1752 29 VLKALEEAGIPIDVIAGTSAGAIVAALYAA 58 (306)
T ss_pred HHHHHHHcCCCccEEEecCHHHHHHHHHHc
Confidence 566666777778889999999999999884
No 317
>PF13200 DUF4015: Putative glycosyl hydrolase domain
Probab=28.22 E-value=1.9e+02 Score=24.12 Aligned_cols=62 Identities=23% Similarity=0.296 Sum_probs=37.0
Q ss_pred chHHHHHHHHHHCCCEEEeccCCCCCccCCCCCcchHhhHhhcC-CCcchhcHHHHHHHHHhcCC
Q 026476 54 PNLRKLADKVAAAGFYVAVPDFFHGDPYVADGGKPLQEWIKDHG-VDKGFEEAKPVIQALKSKGI 117 (238)
Q Consensus 54 ~~~~~~a~~l~~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~d~~~~~~~l~~~~~ 117 (238)
..+..+.+.+.+.+...+++|. ......-...... ....... ....+.|+.++++.+++++.
T Consensus 13 ~~~~~~~~~i~~t~lNavVIDv-Kdd~G~i~y~s~~-~~~~~~ga~~~~i~D~~~l~~~l~e~gI 75 (316)
T PF13200_consen 13 ERLDKLLDLIKRTELNAVVIDV-KDDDGNITYDSQV-PLAREIGAVKPYIKDLKALVKKLKEHGI 75 (316)
T ss_pred HHHHHHHHHHHhcCCceEEEEE-ecCCceEEecCCC-chhhhcccccccccCHHHHHHHHHHCCC
Confidence 5678888888888999999998 4321110000000 0111111 12235899999999998853
No 318
>KOG2585 consensus Uncharacterized conserved protein [Function unknown]
Probab=28.14 E-value=1.3e+02 Score=26.24 Aligned_cols=37 Identities=8% Similarity=-0.076 Sum_probs=26.2
Q ss_pred CCeeEEEEeccCCCCCchHHHHHHHHHHCCCEEEeccC
Q 026476 38 SKLAVLLISDVYGYEAPNLRKLADKVAAAGFYVAVPDF 75 (238)
Q Consensus 38 ~~~~vl~~hg~~g~~~~~~~~~a~~l~~~G~~v~~~d~ 75 (238)
..|.|+++.|...+ ...-.-.+++|+..||.++++-.
T Consensus 265 ~~P~V~Ilcgpgnn-ggdg~v~gRHL~~~G~~~vi~~p 301 (453)
T KOG2585|consen 265 QWPLVAILCGPGNN-GGDGLVCGRHLAQHGYTPVIYYP 301 (453)
T ss_pred CCceEEEEeCCCCc-cchhHHHHHHHHHcCceeEEEee
Confidence 34668888875433 33445599999999999887654
No 319
>PLN02209 serine carboxypeptidase
Probab=28.12 E-value=1.7e+02 Score=25.51 Aligned_cols=28 Identities=18% Similarity=0.179 Sum_probs=24.5
Q ss_pred CCcEEEEecCCCCCCCHHhHHHHHHHHh
Q 026476 161 EVPLSILGAEIDRLSPPALVKEFEEALN 188 (238)
Q Consensus 161 ~~P~L~i~g~~D~~~p~~~~~~~~~~~~ 188 (238)
..++|+..|+.|-+++.-..+++.+.+.
T Consensus 351 girVLiY~GD~D~icn~~Gte~wi~~L~ 378 (437)
T PLN02209 351 GYRSLIFSGDHDITMPFQATQAWIKSLN 378 (437)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhcC
Confidence 3589999999999999988888888873
No 320
>KOG0780 consensus Signal recognition particle, subunit Srp54 [Intracellular trafficking, secretion, and vesicular transport]
Probab=28.03 E-value=1.2e+02 Score=26.19 Aligned_cols=43 Identities=26% Similarity=0.326 Sum_probs=30.9
Q ss_pred cCCCCCeeEEEEeccCCCC-CchHHHHHHHHHHCCCEEE--eccCC
Q 026476 34 GSPDSKLAVLLISDVYGYE-APNLRKLADKVAAAGFYVA--VPDFF 76 (238)
Q Consensus 34 ~p~~~~~~vl~~hg~~g~~-~~~~~~~a~~l~~~G~~v~--~~d~~ 76 (238)
.|...+|.||++-|.-|.. ...+..+|.++..+||.|. +-|-|
T Consensus 95 ~~~K~kpsVimfVGLqG~GKTTtc~KlA~y~kkkG~K~~LvcaDTF 140 (483)
T KOG0780|consen 95 QPKKGKPSVIMFVGLQGSGKTTTCTKLAYYYKKKGYKVALVCADTF 140 (483)
T ss_pred ccccCCCcEEEEEeccCCCcceeHHHHHHHHHhcCCceeEEeeccc
Confidence 3455668899999866532 3556789999999999865 55554
No 321
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6. These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.
Probab=27.92 E-value=66 Score=26.02 Aligned_cols=33 Identities=24% Similarity=0.249 Sum_probs=25.2
Q ss_pred HHHHHHHHhcCCceEEEEEeeccHHHHHHccCC
Q 026476 106 KPVIQALKSKGITAIGAAGFCWGAKVVVQLGKR 138 (238)
Q Consensus 106 ~~~~~~l~~~~~~~i~l~G~S~GG~~a~~~a~~ 138 (238)
..+++.+.+.+..-=.+.|-|+|+.++..++..
T Consensus 26 iGVL~aLeE~gi~~d~v~GtSaGAiiga~ya~g 58 (269)
T cd07227 26 IGILQALEEAGIPIDAIGGTSIGSFVGGLYARE 58 (269)
T ss_pred HHHHHHHHHcCCCccEEEEECHHHHHHHHHHcC
Confidence 345667767666666799999999999998743
No 322
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=27.80 E-value=82 Score=23.30 Aligned_cols=31 Identities=32% Similarity=0.279 Sum_probs=23.4
Q ss_pred HHHHHHHhcCCceEEEEEeeccHHHHHHccC
Q 026476 107 PVIQALKSKGITAIGAAGFCWGAKVVVQLGK 137 (238)
Q Consensus 107 ~~~~~l~~~~~~~i~l~G~S~GG~~a~~~a~ 137 (238)
.+++.+.+++...=.+.|-|.|+..+..++.
T Consensus 17 Gvl~~L~e~g~~~d~i~GtSaGAi~aa~~a~ 47 (175)
T cd07228 17 GVLRALEEEGIEIDIIAGSSIGALVGALYAA 47 (175)
T ss_pred HHHHHHHHCCCCeeEEEEeCHHHHHHHHHHc
Confidence 3456666665556679999999999999874
No 323
>cd08190 HOT Hydroxyacid-oxoacid transhydrogenase (HOT) involved in gamma-hydroxybutyrate metabolism. Hydroxyacid-oxoacid transhydrogenase (HOT), also known as D-2-hydroxyglutarate transhydrogenase. It catalyzes the conversion of gamma-hydroxybutyrate (GHB) to succinic semialdehyde (SSA), coupled to the stoichiometric conversion of alpha-ketoglutarate to D-2-hydroxyglutarate in gamma-Hydroxybutyrate catabolism. Unlike many other alcohols, which are oxidized by NAD-linked dehydrogenases, gamma-hydroxybutyrate is metabolized to succinate semialdehyde by hydroxyacid-oxoacid transhydrogenase which does not require free NAD or NADP, but instead using alpha -ketoglutarate as an acceptor, converting it to d-2-hydroxyglutarate. Alpha-ketoglutarate serves as an intermediate acceptor to regenerate NAD(P) required for the oxidation of GHB. HOT also catalyzes the reversible oxidation of a hydroxyacid obligatorily coupled to the reduction of an oxoacid, and requires no cofactor. In mammals, the HOT
Probab=27.52 E-value=3.4e+02 Score=23.47 Aligned_cols=64 Identities=27% Similarity=0.224 Sum_probs=38.4
Q ss_pred eeEEEEeccCCCCCchHHHHHHHHHHCCCEEEeccCCCCCccCCCCCcchHhhHhhcCCCcchhcHHHHHHHHHhcCCce
Q 026476 40 LAVLLISDVYGYEAPNLRKLADKVAAAGFYVAVPDFFHGDPYVADGGKPLQEWIKDHGVDKGFEEAKPVIQALKSKGITA 119 (238)
Q Consensus 40 ~~vl~~hg~~g~~~~~~~~~a~~l~~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~ 119 (238)
+.++++.+..-........+.+.|.+.|+.+..++.....+ ..+.+.++++.+++.+.+-
T Consensus 24 ~~vlivt~~~~~~~g~~~~v~~~L~~~gi~~~~f~~v~~~p--------------------~~~~v~~~~~~~~~~~~D~ 83 (414)
T cd08190 24 RRVCLVTDPNLAQLPPVKVVLDSLEAAGINFEVYDDVRVEP--------------------TDESFKDAIAFAKKGQFDA 83 (414)
T ss_pred CeEEEEECcchhhcchHHHHHHHHHHcCCcEEEeCCCCCCc--------------------CHHHHHHHHHHHHhcCCCE
Confidence 35666666432222345778888888888887765311111 2356777888888776655
Q ss_pred EEEE
Q 026476 120 IGAA 123 (238)
Q Consensus 120 i~l~ 123 (238)
|.-+
T Consensus 84 IIai 87 (414)
T cd08190 84 FVAV 87 (414)
T ss_pred EEEe
Confidence 4444
No 324
>TIGR02638 lactal_redase lactaldehyde reductase. This clade of genes encoding iron-containing alcohol dehydrogenase (pfam00465) proteins is generally found in apparent operons for the catabolism of rhamnose or fucose. Catabolism of both of these monosaccharides results in lactaldehyde which is reduced by this enzyme to 1,2 propanediol. This protein is alternatively known by the name 1,2 propanediol oxidoreductase. This enzyme is active under anaerobic conditions in E. coli while being inactivated by reactive oxygen species under aerobic conditions. Under aerobic conditions the lactaldehyde product of rhamnose and fucose catabolism is believed to be oxidized to lactate by a separate enzyme, lactaldehyde dehydrogenase.
Probab=27.48 E-value=3.2e+02 Score=23.23 Aligned_cols=64 Identities=20% Similarity=0.182 Sum_probs=37.5
Q ss_pred eEEEEeccCCCCCchHHHHHHHHHHCCCEEEeccCCCCCccCCCCCcchHhhHhhcCCCcchhcHHHHHHHHHhcCCceE
Q 026476 41 AVLLISDVYGYEAPNLRKLADKVAAAGFYVAVPDFFHGDPYVADGGKPLQEWIKDHGVDKGFEEAKPVIQALKSKGITAI 120 (238)
Q Consensus 41 ~vl~~hg~~g~~~~~~~~~a~~l~~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~i 120 (238)
.++++.+..-........+...|.+.|+.+..++-.. .+-..+.+.++++.+++.+.+-|
T Consensus 31 r~lvvt~~~~~~~g~~~~v~~~L~~~~i~~~~~~~v~--------------------~~p~~~~v~~~~~~~~~~~~D~I 90 (379)
T TIGR02638 31 KALVVTDKDLIKFGVADKVTDLLDEAGIAYELFDEVK--------------------PNPTITVVKAGVAAFKASGADYL 90 (379)
T ss_pred EEEEEcCcchhhccchHHHHHHHHHCCCeEEEECCCC--------------------CCcCHHHHHHHHHHHHhcCCCEE
Confidence 4666665332222345677788888888776655311 11124667788888887766655
Q ss_pred EEEE
Q 026476 121 GAAG 124 (238)
Q Consensus 121 ~l~G 124 (238)
..+|
T Consensus 91 iaiG 94 (379)
T TIGR02638 91 IAIG 94 (379)
T ss_pred EEeC
Confidence 5443
No 325
>TIGR01287 nifH nitrogenase iron protein. This model describes nitrogenase (EC 1.18.6.1) iron protein, also called nitrogenase reductase or nitrogenase component II. This model includes molybdenum-iron nitrogenase reductase (nifH), vanadium-iron nitrogenase reductase (vnfH), and iron-iron nitrogenase reductase (anfH). The model excludes the homologous protein from the light-independent protochlorophyllide reductase.
Probab=27.30 E-value=60 Score=25.98 Aligned_cols=24 Identities=17% Similarity=0.187 Sum_probs=20.0
Q ss_pred hHHHHHHHHHHCCCEEEeccCCCCC
Q 026476 55 NLRKLADKVAAAGFYVAVPDFFHGD 79 (238)
Q Consensus 55 ~~~~~a~~l~~~G~~v~~~d~~~g~ 79 (238)
-...+|..|+++|+.|+++|. ..+
T Consensus 16 ~a~nLA~~La~~G~~VlliD~-D~q 39 (275)
T TIGR01287 16 TTQNIAAALAEMGKKVMIVGC-DPK 39 (275)
T ss_pred HHHHHHHHHHHCCCeEEEEeC-CCC
Confidence 346899999999999999998 544
No 326
>KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=27.21 E-value=1.4e+02 Score=25.44 Aligned_cols=39 Identities=23% Similarity=0.357 Sum_probs=31.0
Q ss_pred CCCeeEEEEeccCCCCCchHHHHHHHHHHCCCEEEeccCC
Q 026476 37 DSKLAVLLISDVYGYEAPNLRKLADKVAAAGFYVAVPDFF 76 (238)
Q Consensus 37 ~~~~~vl~~hg~~g~~~~~~~~~a~~l~~~G~~v~~~d~~ 76 (238)
.++.++|++-|-.|.. +++..-|..|+..||.|=..-+.
T Consensus 11 ~k~ra~vvVLGDvGRS-PRMqYHA~Sla~~gf~VdliGy~ 49 (444)
T KOG2941|consen 11 KKKRAIVVVLGDVGRS-PRMQYHALSLAKLGFQVDLIGYV 49 (444)
T ss_pred ccceEEEEEecccCCC-hHHHHHHHHHHHcCCeEEEEEec
Confidence 3456777777777875 78999999999999999877763
No 327
>PRK09860 putative alcohol dehydrogenase; Provisional
Probab=27.16 E-value=3.5e+02 Score=23.09 Aligned_cols=64 Identities=11% Similarity=0.122 Sum_probs=38.0
Q ss_pred eEEEEeccCCCCCchHHHHHHHHHHCCCEEEeccCCCCCccCCCCCcchHhhHhhcCCCcchhcHHHHHHHHHhcCCceE
Q 026476 41 AVLLISDVYGYEAPNLRKLADKVAAAGFYVAVPDFFHGDPYVADGGKPLQEWIKDHGVDKGFEEAKPVIQALKSKGITAI 120 (238)
Q Consensus 41 ~vl~~hg~~g~~~~~~~~~a~~l~~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~i 120 (238)
.++++.+..-.....+..+...|.+.|..+..+|.-.. +-..+++.++++.+++.+.+-|
T Consensus 33 ~~livt~~~~~~~g~~~~v~~~L~~~~i~~~~f~~v~~--------------------np~~~~v~~~~~~~~~~~~D~I 92 (383)
T PRK09860 33 RTLIVTDNMLTKLGMAGDVQKALEERNIFSVIYDGTQP--------------------NPTTENVAAGLKLLKENNCDSV 92 (383)
T ss_pred EEEEEcCcchhhCccHHHHHHHHHHcCCeEEEeCCCCC--------------------CcCHHHHHHHHHHHHHcCCCEE
Confidence 45555553212224566788888888877766663111 1134677888888888766665
Q ss_pred EEEE
Q 026476 121 GAAG 124 (238)
Q Consensus 121 ~l~G 124 (238)
.-+|
T Consensus 93 iaiG 96 (383)
T PRK09860 93 ISLG 96 (383)
T ss_pred EEeC
Confidence 5454
No 328
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=27.04 E-value=1.3e+02 Score=22.41 Aligned_cols=53 Identities=13% Similarity=-0.088 Sum_probs=35.6
Q ss_pred HHHHCCCEEEeccCCCCCccCCCCCcchHhhHhhcCCCcchhcHHHHHHHHHhcCC-ceEEEEEeecc
Q 026476 62 KVAAAGFYVAVPDFFHGDPYVADGGKPLQEWIKDHGVDKGFEEAKPVIQALKSKGI-TAIGAAGFCWG 128 (238)
Q Consensus 62 ~l~~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~-~~i~l~G~S~G 128 (238)
.|.+.|+..++.|. ...=.. | .......++.++++.+++... ++|.++--|.|
T Consensus 35 ~Lk~~Gik~li~Dk-DNTL~~---------~----~~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaG 88 (168)
T PF09419_consen 35 HLKKKGIKALIFDK-DNTLTP---------P----YEDEIPPEYAEWLNELKKQFGKDRVLIVSNSAG 88 (168)
T ss_pred hhhhcCceEEEEcC-CCCCCC---------C----CcCcCCHHHHHHHHHHHHHCCCCeEEEEECCCC
Confidence 47888999999998 333111 1 112344677888888887744 48999977764
No 329
>PF08643 DUF1776: Fungal family of unknown function (DUF1776); InterPro: IPR013952 This is a fungal protein of unknown function. One of the proteins P32792 from SWISSPROT has been localised to the mitochondria [].
Probab=26.83 E-value=1.1e+02 Score=25.22 Aligned_cols=32 Identities=31% Similarity=0.313 Sum_probs=24.0
Q ss_pred EEEEeccCCCCCchHHHHHHHHHHCCCEEEeccC
Q 026476 42 VLLISDVYGYEAPNLRKLADKVAAAGFYVAVPDF 75 (238)
Q Consensus 42 vl~~hg~~g~~~~~~~~~a~~l~~~G~~v~~~d~ 75 (238)
||++.|... .+..+.++.-|.++||.|++--.
T Consensus 5 vVvI~Gs~~--~PltR~la~DLeRRGFIV~v~~~ 36 (299)
T PF08643_consen 5 VVVIAGSPH--DPLTRSLALDLERRGFIVYVTVS 36 (299)
T ss_pred EEEEECCCC--CccHHHHHHHHhhCCeEEEEEeC
Confidence 566666432 46678999999999999997654
No 330
>PHA03256 BDLF3; Provisional
Probab=26.82 E-value=36 Score=21.23 Aligned_cols=10 Identities=40% Similarity=0.843 Sum_probs=7.4
Q ss_pred CCcccccCCC
Q 026476 1 MSGPQCCANP 10 (238)
Q Consensus 1 ~~~~~~~~~~ 10 (238)
||-|.|+.+.
T Consensus 1 msapgcs~~~ 10 (77)
T PHA03256 1 MSAPGCSERQ 10 (77)
T ss_pred CCCCCccccc
Confidence 7788888763
No 331
>PHA02518 ParA-like protein; Provisional
Probab=26.68 E-value=71 Score=24.11 Aligned_cols=31 Identities=23% Similarity=0.172 Sum_probs=22.7
Q ss_pred ccCCCCCchHHHHHHHHHHCCCEEEeccCCCCC
Q 026476 47 DVYGYEAPNLRKLADKVAAAGFYVAVPDFFHGD 79 (238)
Q Consensus 47 g~~g~~~~~~~~~a~~l~~~G~~v~~~d~~~g~ 79 (238)
|+.|.. .....+|..|+++|+.|+++|. ..+
T Consensus 10 GGvGKT-T~a~~la~~la~~g~~vlliD~-D~q 40 (211)
T PHA02518 10 GGAGKT-TVATNLASWLHADGHKVLLVDL-DPQ 40 (211)
T ss_pred CCCCHH-HHHHHHHHHHHhCCCeEEEEeC-CCC
Confidence 344432 3446789999999999999998 544
No 332
>PRK13230 nitrogenase reductase-like protein; Reviewed
Probab=26.63 E-value=49 Score=26.59 Aligned_cols=24 Identities=21% Similarity=0.200 Sum_probs=20.0
Q ss_pred hHHHHHHHHHHCCCEEEeccCCCCC
Q 026476 55 NLRKLADKVAAAGFYVAVPDFFHGD 79 (238)
Q Consensus 55 ~~~~~a~~l~~~G~~v~~~d~~~g~ 79 (238)
....+|..|+++|+.|+++|. .-+
T Consensus 17 ~a~nLA~~La~~G~rVLliD~-Dpq 40 (279)
T PRK13230 17 TVCNIAAALAESGKKVLVVGC-DPK 40 (279)
T ss_pred HHHHHHHHHHhCCCEEEEEee-CCc
Confidence 346899999999999999998 444
No 333
>cd02037 MRP-like MRP (Multiple Resistance and pH adaptation) is a homologue of the Fer4_NifH superfamily. Like the other members of the superfamily, MRP contains a ATP-binding domain at the N-termini. It is found in bacteria as a membrane-spanning protein and functions as a Na+/H+ antiporter.
Probab=26.41 E-value=69 Score=23.42 Aligned_cols=21 Identities=29% Similarity=0.246 Sum_probs=18.5
Q ss_pred hHHHHHHHHHHCCCEEEeccC
Q 026476 55 NLRKLADKVAAAGFYVAVPDF 75 (238)
Q Consensus 55 ~~~~~a~~l~~~G~~v~~~d~ 75 (238)
-...+|..+++.|+.|+++|.
T Consensus 16 ~a~~LA~~la~~g~~vllvD~ 36 (169)
T cd02037 16 VAVNLALALAKLGYKVGLLDA 36 (169)
T ss_pred HHHHHHHHHHHcCCcEEEEeC
Confidence 346899999999999999998
No 334
>COG3494 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=26.33 E-value=2.3e+02 Score=22.87 Aligned_cols=58 Identities=19% Similarity=0.330 Sum_probs=41.8
Q ss_pred HHHHHHHHHCCCEEEeccCCCCCccCCCCCcchHhhHhhcCC-CcchhcHHHHHHHHHhcCCceEEEEE
Q 026476 57 RKLADKVAAAGFYVAVPDFFHGDPYVADGGKPLQEWIKDHGV-DKGFEEAKPVIQALKSKGITAIGAAG 124 (238)
Q Consensus 57 ~~~a~~l~~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~d~~~~~~~l~~~~~~~i~l~G 124 (238)
..++....++|+.++.+-. ++.... +|. .+.. .-.+.++-.++.+++.++.++|.+.|
T Consensus 18 ~~va~~a~~~G~~~~ii~l-~~eaD~--------~~~-~~e~~~~~iG~vg~lik~l~~~~v~~vVl~G 76 (279)
T COG3494 18 LEVAENARNQGYAPFIIGL-RGEADP--------ELK-EFEYKEVSIGEVGKLIKLLKTEGVDRVVLAG 76 (279)
T ss_pred HHHHHHHHhCCCCcEEEEe-cCccch--------hhh-cCCCeEEeHHHHHHHHHHHHHcCCcEEEEec
Confidence 5788999999999999988 554321 121 2221 23567888899999998888988887
No 335
>PF14253 AbiH: Bacteriophage abortive infection AbiH
Probab=26.27 E-value=53 Score=26.13 Aligned_cols=15 Identities=27% Similarity=0.255 Sum_probs=12.7
Q ss_pred CCceEEEEEeeccHH
Q 026476 116 GITAIGAAGFCWGAK 130 (238)
Q Consensus 116 ~~~~i~l~G~S~GG~ 130 (238)
+...|.++|||+|..
T Consensus 233 ~i~~I~i~GhSl~~~ 247 (270)
T PF14253_consen 233 DIDEIIIYGHSLGEV 247 (270)
T ss_pred CCCEEEEEeCCCchh
Confidence 468999999999864
No 336
>PRK15454 ethanol dehydrogenase EutG; Provisional
Probab=26.12 E-value=3.7e+02 Score=23.06 Aligned_cols=64 Identities=17% Similarity=0.265 Sum_probs=37.8
Q ss_pred eEEEEeccCCCCCchHHHHHHHHHHCCCEEEeccCCCCCccCCCCCcchHhhHhhcCCCcchhcHHHHHHHHHhcCCceE
Q 026476 41 AVLLISDVYGYEAPNLRKLADKVAAAGFYVAVPDFFHGDPYVADGGKPLQEWIKDHGVDKGFEEAKPVIQALKSKGITAI 120 (238)
Q Consensus 41 ~vl~~hg~~g~~~~~~~~~a~~l~~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~i 120 (238)
.+|++.+..-.....+..+...|.+.|..+..+|.....+ ..+.+.+.++.+++.+.+-|
T Consensus 51 ~~lvv~~~~~~~~g~~~~v~~~L~~~gi~~~~~~~v~~~P--------------------~~~~v~~~~~~~r~~~~D~I 110 (395)
T PRK15454 51 HLFVMADSFLHQAGMTAGLTRSLAVKGIAMTLWPCPVGEP--------------------CITDVCAAVAQLRESGCDGV 110 (395)
T ss_pred EEEEEcCcchhhCccHHHHHHHHHHcCCeEEEECCCCCCc--------------------CHHHHHHHHHHHHhcCcCEE
Confidence 4444444221223456778888888888777665311111 23567788888888766665
Q ss_pred EEEE
Q 026476 121 GAAG 124 (238)
Q Consensus 121 ~l~G 124 (238)
.-+|
T Consensus 111 iavG 114 (395)
T PRK15454 111 IAFG 114 (395)
T ss_pred EEeC
Confidence 5554
No 337
>PRK06490 glutamine amidotransferase; Provisional
Probab=26.01 E-value=3e+02 Score=21.69 Aligned_cols=92 Identities=11% Similarity=0.085 Sum_probs=42.2
Q ss_pred eeEEEEeccCCCCCchHHHHHHHHHHCCCEEEeccCCCCCccCCCCCcchHhhHhhcCC---CcchhcHHHHHHHHHhcC
Q 026476 40 LAVLLISDVYGYEAPNLRKLADKVAAAGFYVAVPDFFHGDPYVADGGKPLQEWIKDHGV---DKGFEEAKPVIQALKSKG 116 (238)
Q Consensus 40 ~~vl~~hg~~g~~~~~~~~~a~~l~~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~---~~~~~d~~~~~~~l~~~~ 116 (238)
..+++.|-..+. ...+.+.|...|+.+-+.+...+...+. .-.....++-.-.+ .+...-+...++++++.-
T Consensus 9 ~vlvi~h~~~~~----~g~l~~~l~~~g~~~~v~~~~~~~~~p~-~l~~~dgvii~Ggp~~~~d~~~wi~~~~~~i~~~~ 83 (239)
T PRK06490 9 PVLIVLHQERST----PGRVGQLLQERGYPLDIRRPRLGDPLPD-TLEDHAGAVIFGGPMSANDPDDFIRREIDWISVPL 83 (239)
T ss_pred eEEEEecCCCCC----ChHHHHHHHHCCCceEEEeccCCCCCCC-cccccCEEEEECCCCCCCCCchHHHHHHHHHHHHH
Confidence 445555643332 3457788888888777665433322110 00000001000000 001111222333443221
Q ss_pred CceEEEEEeeccHHHHHHcc
Q 026476 117 ITAIGAAGFCWGAKVVVQLG 136 (238)
Q Consensus 117 ~~~i~l~G~S~GG~~a~~~a 136 (238)
..++=++|.|+|..+.....
T Consensus 84 ~~~~PvLGIC~G~Qlla~al 103 (239)
T PRK06490 84 KENKPFLGICLGAQMLARHL 103 (239)
T ss_pred HCCCCEEEECHhHHHHHHHc
Confidence 12345999999999988854
No 338
>KOG3170 consensus Conserved phosducin-like protein [Signal transduction mechanisms]
Probab=25.68 E-value=1.5e+02 Score=22.89 Aligned_cols=57 Identities=11% Similarity=0.026 Sum_probs=37.3
Q ss_pred CCCCCCceEEeeCCeeEEEecCCCCCeeEEEEecc------------CCCCCchHHHHHHHHHHCCCEEE
Q 026476 14 NPNSGAGHVEKLGGLNAYVTGSPDSKLAVLLISDV------------YGYEAPNLRKLADKVAAAGFYVA 71 (238)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~vl~~hg~------------~g~~~~~~~~~a~~l~~~G~~v~ 71 (238)
..-.|.-+++.+-...+.-..|+..-|++++.|++ +|.+ ..+..++..|.+.|-++-
T Consensus 137 a~kfp~iKFVki~at~cIpNYPe~nlPTl~VY~~G~lk~q~igll~lgG~n-~t~ed~e~~L~qaga~l~ 205 (240)
T KOG3170|consen 137 ACKFPQIKFVKIPATTCIPNYPESNLPTLLVYHHGALKKQMIGLLELGGMN-LTMEDVEDFLVQAGAALT 205 (240)
T ss_pred hhcCCcceEEecccccccCCCcccCCCeEEEeecchHHhheehhhhhcCCc-CCHHHHHHHHHhcccccc
Confidence 34456677776655555555577677888887753 2343 456789999999885443
No 339
>PRK06703 flavodoxin; Provisional
Probab=25.68 E-value=1.8e+02 Score=20.81 Aligned_cols=35 Identities=9% Similarity=0.089 Sum_probs=21.8
Q ss_pred eEEEEeccCCCCCchHHHHHHHHHHCCCEEEeccC
Q 026476 41 AVLLISDVYGYEAPNLRKLADKVAAAGFYVAVPDF 75 (238)
Q Consensus 41 ~vl~~hg~~g~~~~~~~~~a~~l~~~G~~v~~~d~ 75 (238)
.+|+.....|+.......+++.|...|+.|-+.+.
T Consensus 4 v~IiY~S~tGnT~~iA~~ia~~l~~~g~~v~~~~~ 38 (151)
T PRK06703 4 ILIAYASMSGNTEDIADLIKVSLDAFDHEVVLQEM 38 (151)
T ss_pred EEEEEECCCchHHHHHHHHHHHHHhcCCceEEEeh
Confidence 45555556666433445666777777887776665
No 340
>TIGR01281 DPOR_bchL light-independent protochlorophyllide reductase, iron-sulfur ATP-binding protein. The BchL peptide (ChlL in chloroplast and cyanobacteria) is an ATP-binding iron-sulfur protein of the dark form protochlorophyllide reductase, an enzyme similar to nitrogenase. This subunit resembles the nitrogenase NifH subunit.
Probab=25.63 E-value=54 Score=26.14 Aligned_cols=23 Identities=17% Similarity=-0.006 Sum_probs=19.4
Q ss_pred HHHHHHHHHHCCCEEEeccCCCCC
Q 026476 56 LRKLADKVAAAGFYVAVPDFFHGD 79 (238)
Q Consensus 56 ~~~~a~~l~~~G~~v~~~d~~~g~ 79 (238)
...+|..|+++|+.|+++|. .-+
T Consensus 17 ~~nLA~~La~~g~rVLliD~-D~q 39 (268)
T TIGR01281 17 SSNLSVAFAKLGKRVLQIGC-DPK 39 (268)
T ss_pred HHHHHHHHHhCCCeEEEEec-Ccc
Confidence 46899999999999999998 443
No 341
>TIGR01378 thi_PPkinase thiamine pyrophosphokinase. This model has been revised. Originally, it described strictly eukaryotic thiamine pyrophosphokinase. However, it is now expanded to include also homologous enzymes, apparently functionally equivalent, from species that rely on thiamine pyrophosphokinase rather than thiamine-monophosphate kinase (TIGR01379) to produce the active TPP cofactor. This includes the thiamine pyrophosphokinase from Bacillus subtilis, previously designated YloS.
Probab=25.58 E-value=86 Score=24.06 Aligned_cols=38 Identities=16% Similarity=0.184 Sum_probs=29.9
Q ss_pred CCCcchhcHHHHHHHHHhcCCceEEEEEeeccHHHHHHc
Q 026476 97 GVDKGFEEAKPVIQALKSKGITAIGAAGFCWGAKVVVQL 135 (238)
Q Consensus 97 ~~~~~~~d~~~~~~~l~~~~~~~i~l~G~S~GG~~a~~~ 135 (238)
..++...|...+++++.+++.+.|.++|. .||.+=..+
T Consensus 67 ~~eKD~TD~e~Al~~~~~~~~~~i~i~Ga-~GgR~DH~l 104 (203)
T TIGR01378 67 PPEKDTTDLELALKYALERGADEITILGA-TGGRLDHTL 104 (203)
T ss_pred CCCCCCCHHHHHHHHHHHCCCCEEEEEcC-CCCcHHHHH
Confidence 45677789999999988888889999994 777765443
No 342
>PF02606 LpxK: Tetraacyldisaccharide-1-P 4'-kinase; InterPro: IPR003758 Tetraacyldisaccharide 4'-kinase phosphorylates the 4'-position of a tetraacyldisaccharide 1-phosphate precursor (DS-1-P) of lipid A, but the enzyme has not yet been purified because of instability []. This enzyme is involved in the synthesis of lipid A portion of the bacterial lipopolysaccharide layer (LPS).; GO: 0005524 ATP binding, 0009029 tetraacyldisaccharide 4'-kinase activity, 0009245 lipid A biosynthetic process
Probab=25.48 E-value=99 Score=25.80 Aligned_cols=33 Identities=24% Similarity=0.194 Sum_probs=26.2
Q ss_pred ccCCCCCchHHHHHHHHHHCCCEEEeccCCCCCccC
Q 026476 47 DVYGYEAPNLRKLADKVAAAGFYVAVPDFFHGDPYV 82 (238)
Q Consensus 47 g~~g~~~~~~~~~a~~l~~~G~~v~~~d~~~g~~~~ 82 (238)
|+.|. .+....+++.|.++|+.+.+.. ||++..
T Consensus 46 GGTGK-TP~v~~L~~~L~~~G~~~~IlS--RGYg~~ 78 (326)
T PF02606_consen 46 GGTGK-TPLVIWLARLLQARGYRPAILS--RGYGRK 78 (326)
T ss_pred CCCCc-hHHHHHHHHHHHhcCCceEEEc--CCCCCC
Confidence 55565 3777899999999999999888 677654
No 343
>KOG1969 consensus DNA replication checkpoint protein CHL12/CTF18 [Cell cycle control, cell division, chromosome partitioning; Replication, recombination and repair]
Probab=25.48 E-value=3.1e+02 Score=25.96 Aligned_cols=33 Identities=24% Similarity=0.312 Sum_probs=26.2
Q ss_pred eeEEEEeccCCCCCchHHHHHHHHHHC-CCEEEeccC
Q 026476 40 LAVLLISDVYGYEAPNLRKLADKVAAA-GFYVAVPDF 75 (238)
Q Consensus 40 ~~vl~~hg~~g~~~~~~~~~a~~l~~~-G~~v~~~d~ 75 (238)
.-|+++||..|... ..+|..+|.+ ||.|+=++.
T Consensus 326 kKilLL~GppGlGK---TTLAHViAkqaGYsVvEINA 359 (877)
T KOG1969|consen 326 KKILLLCGPPGLGK---TTLAHVIAKQAGYSVVEINA 359 (877)
T ss_pred cceEEeecCCCCCh---hHHHHHHHHhcCceEEEecc
Confidence 45999999888643 4677778876 999998886
No 344
>PF09989 DUF2229: CoA enzyme activase uncharacterised domain (DUF2229); InterPro: IPR018709 Proteins containing this domain include various bacterial hypothetical proteins, as well as CoA enzyme activases. The exact function of this domain has not, as yet, been defined.
Probab=25.46 E-value=92 Score=24.32 Aligned_cols=37 Identities=24% Similarity=0.321 Sum_probs=25.9
Q ss_pred CeeEEEEeccCCC-CCchHHHHHHHHHHCCCEEEeccC
Q 026476 39 KLAVLLISDVYGY-EAPNLRKLADKVAAAGFYVAVPDF 75 (238)
Q Consensus 39 ~~~vl~~hg~~g~-~~~~~~~~a~~l~~~G~~v~~~d~ 75 (238)
.+.|+++-+-+.. ...-...+.+.|.+.|+.|+..|+
T Consensus 183 ~~~Ivl~GrpY~~~D~~in~~I~~~l~~~G~~vit~d~ 220 (221)
T PF09989_consen 183 KPAIVLLGRPYNIYDPFINMGIPDKLRSLGVPVITEDM 220 (221)
T ss_pred CceEEEEcCCCcCCCcccCCchHHHHHHCCCeeeCccc
Confidence 3566666555543 222336899999999999999885
No 345
>TIGR03453 partition_RepA plasmid partitioning protein RepA. Members of this family are the RepA (or ParA) protein involved in replicon partitioning. All known examples occur in bacterial species with two or more replicons, on a plasmid or the smaller chromosome. Note that an apparent exception may be seen as a pseudomolecule from assembly of an incompletely sequenced genome. Members of this family belong to a larger family that also includes the enzyme cobyrinic acid a,c-diamide synthase, but assignment of that name to members of this family would be in error.
Probab=25.10 E-value=1.1e+02 Score=26.07 Aligned_cols=24 Identities=25% Similarity=0.320 Sum_probs=19.5
Q ss_pred hHHHHHHHHHHCCCEEEeccCCCCC
Q 026476 55 NLRKLADKVAAAGFYVAVPDFFHGD 79 (238)
Q Consensus 55 ~~~~~a~~l~~~G~~v~~~d~~~g~ 79 (238)
....+|..|+..|+.|+++|. ..+
T Consensus 121 ~a~nLA~~La~~G~rVLlID~-DpQ 144 (387)
T TIGR03453 121 TAAHLAQYLALRGYRVLAIDL-DPQ 144 (387)
T ss_pred HHHHHHHHHHhcCCCEEEEec-CCC
Confidence 346789999999999999998 443
No 346
>PRK00652 lpxK tetraacyldisaccharide 4'-kinase; Reviewed
Probab=25.07 E-value=1.3e+02 Score=25.10 Aligned_cols=34 Identities=24% Similarity=0.216 Sum_probs=26.1
Q ss_pred eccCCCCCchHHHHHHHHHHCCCEEEeccCCCCCccC
Q 026476 46 SDVYGYEAPNLRKLADKVAAAGFYVAVPDFFHGDPYV 82 (238)
Q Consensus 46 hg~~g~~~~~~~~~a~~l~~~G~~v~~~d~~~g~~~~ 82 (238)
-|+.|. .+....+++.|.++|+.|.++. ||++..
T Consensus 59 vGGtGK-TP~v~~L~~~l~~~g~~~~ils--RGYg~~ 92 (325)
T PRK00652 59 VGGTGK-TPVVIALAEQLQARGLKPGVVS--RGYGGK 92 (325)
T ss_pred CCCCCh-HHHHHHHHHHHHHCCCeEEEEC--CCCCCC
Confidence 356665 3677899999999999998887 676553
No 347
>PRK13185 chlL protochlorophyllide reductase iron-sulfur ATP-binding protein; Provisional
Probab=25.07 E-value=66 Score=25.63 Aligned_cols=24 Identities=17% Similarity=0.033 Sum_probs=20.0
Q ss_pred hHHHHHHHHHHCCCEEEeccCCCCC
Q 026476 55 NLRKLADKVAAAGFYVAVPDFFHGD 79 (238)
Q Consensus 55 ~~~~~a~~l~~~G~~v~~~d~~~g~ 79 (238)
....+|..|+++|+.|+++|. ..+
T Consensus 18 ~~~nLA~~la~~G~kVLliD~-Dpq 41 (270)
T PRK13185 18 TSSNLSAAFAKLGKKVLQIGC-DPK 41 (270)
T ss_pred HHHHHHHHHHHCCCeEEEEec-cCC
Confidence 346899999999999999998 543
No 348
>PRK10037 cell division protein; Provisional
Probab=25.03 E-value=54 Score=25.88 Aligned_cols=24 Identities=29% Similarity=0.064 Sum_probs=20.0
Q ss_pred hHHHHHHHHHHCCCEEEeccCCCCC
Q 026476 55 NLRKLADKVAAAGFYVAVPDFFHGD 79 (238)
Q Consensus 55 ~~~~~a~~l~~~G~~v~~~d~~~g~ 79 (238)
....+|..|+++|+.|+++|. ..+
T Consensus 18 ~a~nLA~~La~~G~rVLlID~-D~q 41 (250)
T PRK10037 18 ITAALAWSLQMLGENVLVIDA-CPD 41 (250)
T ss_pred HHHHHHHHHHhcCCcEEEEeC-Chh
Confidence 346899999999999999998 444
No 349
>COG3640 CooC CO dehydrogenase maturation factor [Cell division and chromosome partitioning]
Probab=24.86 E-value=1.3e+02 Score=24.02 Aligned_cols=34 Identities=21% Similarity=0.299 Sum_probs=22.5
Q ss_pred EEEEeccCCCCCchHHHH-HHHHHHC-CCEEEeccC
Q 026476 42 VLLISDVYGYEAPNLRKL-ADKVAAA-GFYVAVPDF 75 (238)
Q Consensus 42 vl~~hg~~g~~~~~~~~~-a~~l~~~-G~~v~~~d~ 75 (238)
.|.+.|=+|.....+..+ +..|.++ ||.|+++|.
T Consensus 2 kIaI~GKGG~GKTtiaalll~~l~~~~~~~VLvVDa 37 (255)
T COG3640 2 KIAITGKGGVGKTTIAALLLKRLLSKGGYNVLVVDA 37 (255)
T ss_pred eEEEecCCCccHHHHHHHHHHHHHhcCCceEEEEeC
Confidence 355666555544455554 6666666 599999997
No 350
>PRK05368 homoserine O-succinyltransferase; Provisional
Probab=24.83 E-value=84 Score=25.95 Aligned_cols=32 Identities=19% Similarity=0.396 Sum_probs=26.0
Q ss_pred hhcHHHHHHHHHhcCCceEEEEEeeccHHHHHHcc
Q 026476 102 FEEAKPVIQALKSKGITAIGAAGFCWGAKVVVQLG 136 (238)
Q Consensus 102 ~~d~~~~~~~l~~~~~~~i~l~G~S~GG~~a~~~a 136 (238)
...+..+++|+++. .+.++|.|||..+++.+.
T Consensus 121 W~El~~i~~w~~~~---~~s~LgICwGaQa~a~al 152 (302)
T PRK05368 121 WDELKEILDWAKTH---VTSTLFICWAAQAALYHL 152 (302)
T ss_pred HHHHHHHHHHHHHc---CCCEEEEcHHHHHHHHHc
Confidence 45588899999875 456999999999999755
No 351
>TIGR03709 PPK2_rel_1 polyphosphate:nucleotide phosphotransferase, PPK2 family. Members of this protein family belong to the polyphosphate kinase 2 (PPK2) family, which is not related in sequence to PPK1. While PPK1 tends to act in the biosynthesis of polyphosphate, or poly(P), members of the PPK2 family tend to use the terminal phosphate of poly(P) to regenerate ATP or GTP from the corresponding nucleoside diphosphate, or ADP from AMP as is the case with polyphosphate:AMP phosphotransferase (PAP). Members of this protein family most likely transfer the terminal phosphate between poly(P) and some nucleotide, but it is not clear which.
Probab=24.83 E-value=97 Score=25.02 Aligned_cols=38 Identities=13% Similarity=0.157 Sum_probs=29.3
Q ss_pred CCeeEEEEeccCCCC-CchHHHHHHHHHHCCCEEEeccC
Q 026476 38 SKLAVLLISDVYGYE-APNLRKLADKVAAAGFYVAVPDF 75 (238)
Q Consensus 38 ~~~~vl~~hg~~g~~-~~~~~~~a~~l~~~G~~v~~~d~ 75 (238)
..|+||++.|+-+.. ...++.+...|..+|+.|.++..
T Consensus 54 ~~~vlIv~eG~DaAGKG~~I~~l~~~lDPRg~~V~s~~~ 92 (264)
T TIGR03709 54 RRSLLLVLQAMDAAGKDGTIRHVMSGVNPQGCQVTSFKA 92 (264)
T ss_pred CCcEEEEEECCCCCCchHHHHHHHHhcCCCeeEEEeCCC
Confidence 358899999976543 24557888888889999999875
No 352
>PRK10624 L-1,2-propanediol oxidoreductase; Provisional
Probab=24.70 E-value=4.1e+02 Score=22.61 Aligned_cols=63 Identities=21% Similarity=0.224 Sum_probs=36.6
Q ss_pred eEEEEeccCCCCCchHHHHHHHHHHCCCEEEeccCCCCCccCCCCCcchHhhHhhcCCCcchhcHHHHHHHHHhcCCceE
Q 026476 41 AVLLISDVYGYEAPNLRKLADKVAAAGFYVAVPDFFHGDPYVADGGKPLQEWIKDHGVDKGFEEAKPVIQALKSKGITAI 120 (238)
Q Consensus 41 ~vl~~hg~~g~~~~~~~~~a~~l~~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~i 120 (238)
.++++.+..-........+...|.+.|+.+..+|-... +-..+.+..+++.+++.+.+-|
T Consensus 32 ~~lvvtd~~~~~~g~~~~v~~~L~~~g~~~~~~~~v~~--------------------~p~~~~v~~~~~~~~~~~~D~I 91 (382)
T PRK10624 32 KALIVTDKTLVKCGVVAKVTDVLDAAGLAYEIYDGVKP--------------------NPTIEVVKEGVEVFKASGADYL 91 (382)
T ss_pred EEEEEeCcchhhCcchHHHHHHHHHCCCeEEEeCCCCC--------------------CcCHHHHHHHHHHHHhcCCCEE
Confidence 46666653222223456777888888887766653111 1123667778888887766644
Q ss_pred EEE
Q 026476 121 GAA 123 (238)
Q Consensus 121 ~l~ 123 (238)
.-+
T Consensus 92 Iai 94 (382)
T PRK10624 92 IAI 94 (382)
T ss_pred EEe
Confidence 433
No 353
>cd02032 Bchl_like This family of proteins contains bchL and chlL. Protochlorophyllide reductase catalyzes the reductive formation of chlorophyllide from protochlorophyllide during biosynthesis of chlorophylls and bacteriochlorophylls. Three genes, bchL, bchN and bchB, are involved in light-independent protochlorophyllide reduction in bacteriochlorophyll biosynthesis. In cyanobacteria, algae, and gymnosperms, three similar genes, chlL, chlN and chlB are involved in protochlorophyllide reduction during chlorophylls biosynthesis. BchL/chlL, bchN/chlN and bchB/chlB exhibit significant sequence similarity to the nifH, nifD and nifK subunits of nitrogenase, respectively. Nitrogenase catalyzes the reductive formation of ammonia from dinitrogen.
Probab=24.64 E-value=1.1e+02 Score=24.22 Aligned_cols=21 Identities=19% Similarity=0.044 Sum_probs=18.6
Q ss_pred hHHHHHHHHHHCCCEEEeccC
Q 026476 55 NLRKLADKVAAAGFYVAVPDF 75 (238)
Q Consensus 55 ~~~~~a~~l~~~G~~v~~~d~ 75 (238)
....+|..|+.+|+.|+++|.
T Consensus 16 ~a~nLA~~la~~G~rvlliD~ 36 (267)
T cd02032 16 TSSNLSVALAKRGKKVLQIGC 36 (267)
T ss_pred HHHHHHHHHHHCCCcEEEEec
Confidence 346899999999999999998
No 354
>COG0331 FabD (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]
Probab=24.52 E-value=76 Score=26.29 Aligned_cols=30 Identities=17% Similarity=0.215 Sum_probs=22.3
Q ss_pred HHHHHHhcC--CceEEEEEeeccHHHHHHccC
Q 026476 108 VIQALKSKG--ITAIGAAGFCWGAKVVVQLGK 137 (238)
Q Consensus 108 ~~~~l~~~~--~~~i~l~G~S~GG~~a~~~a~ 137 (238)
+++.++++. ..+..+.|||+|=+.|+.++.
T Consensus 73 ~~~~l~~~~~~~~p~~~aGHSlGEysAl~~ag 104 (310)
T COG0331 73 AYRVLAEQGLGVKPDFVAGHSLGEYSALAAAG 104 (310)
T ss_pred HHHHHHHhcCCCCCceeecccHhHHHHHHHcc
Confidence 344444543 678899999999999998764
No 355
>cd02040 NifH NifH gene encodes component II (iron protein) of nitrogenase. Nitrogenase is responsible for the biological nitrogen fixation, i.e. reduction of molecular nitrogen to ammonia. NifH consists of two oxygen-sensitive metallosulfur proteins: the mollybdenum-iron (alternatively, vanadium-iron or iron-iron) protein (commonly referred to as component 1), and the iron protein (commonly referred to as component 2). The iron protein is a homodimer, with an Fe4S4 cluster bound between the subunits and two ATP-binding domains. It supplies energy by ATP hydrolysis, and transfers electrons from reduced ferredoxin or flavodoxin to component 1 for the reduction of molecular nitrogen to ammonia.
Probab=24.44 E-value=72 Score=25.31 Aligned_cols=25 Identities=16% Similarity=0.179 Sum_probs=20.5
Q ss_pred chHHHHHHHHHHCCCEEEeccCCCCC
Q 026476 54 PNLRKLADKVAAAGFYVAVPDFFHGD 79 (238)
Q Consensus 54 ~~~~~~a~~l~~~G~~v~~~d~~~g~ 79 (238)
.....+|..|++.|+.|+++|. ..+
T Consensus 16 T~~~nLA~~La~~G~kVlliD~-Dpq 40 (270)
T cd02040 16 TTTQNLSAALAEMGKKVMIVGC-DPK 40 (270)
T ss_pred HHHHHHHHHHHhCCCeEEEEEc-CCC
Confidence 3346899999999999999998 544
No 356
>PRK13235 nifH nitrogenase reductase; Reviewed
Probab=24.36 E-value=53 Score=26.33 Aligned_cols=21 Identities=19% Similarity=0.116 Sum_probs=18.6
Q ss_pred hHHHHHHHHHHCCCEEEeccC
Q 026476 55 NLRKLADKVAAAGFYVAVPDF 75 (238)
Q Consensus 55 ~~~~~a~~l~~~G~~v~~~d~ 75 (238)
..-.+|..|++.|+.|+++|.
T Consensus 17 ~~~nLA~~La~~G~rVLlID~ 37 (274)
T PRK13235 17 TTQNTVAGLAEMGKKVMVVGC 37 (274)
T ss_pred HHHHHHHHHHHCCCcEEEEec
Confidence 346899999999999999998
No 357
>cd07224 Pat_like Patatin-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=24.36 E-value=77 Score=24.88 Aligned_cols=31 Identities=19% Similarity=0.183 Sum_probs=23.9
Q ss_pred HHHHHHHhcCCc--eEEEEEeeccHHHHHHccC
Q 026476 107 PVIQALKSKGIT--AIGAAGFCWGAKVVVQLGK 137 (238)
Q Consensus 107 ~~~~~l~~~~~~--~i~l~G~S~GG~~a~~~a~ 137 (238)
.+++.+.+++.. .-.+.|-|.|+..+..++.
T Consensus 16 GVl~~L~e~gi~~~~~~i~G~SAGAl~aa~~as 48 (233)
T cd07224 16 GVLSLLIEAGVINETTPLAGASAGSLAAACSAS 48 (233)
T ss_pred HHHHHHHHcCCCCCCCEEEEEcHHHHHHHHHHc
Confidence 466777776543 3479999999999999874
No 358
>PF01872 RibD_C: RibD C-terminal domain; InterPro: IPR002734 This domain is found in the C terminus of the bifunctional deaminase-reductase of Escherichia coli, Bacillus subtilis and other bacteria in combination with IPR002125 from INTERPRO that catalyses the second and third steps in the biosynthesis of riboflavin, i.e., the deamination of 2,5-diamino-6-ribosylamino-4(3H)-pyrimidinone 5'-phosphate (deaminase) and the subsequent reduction of the ribosyl side chain (reductase) []. The domain is also present in some HTP reductases from archaea and fungi.; GO: 0008703 5-amino-6-(5-phosphoribosylamino)uracil reductase activity, 0009231 riboflavin biosynthetic process, 0055114 oxidation-reduction process; PDB: 3KY8_B 3KGY_B 2GD9_B 3JTW_B 2XW7_B 2D5N_B 2B3Z_A 3EX8_B 2AZN_A 2P4G_A ....
Probab=24.03 E-value=1.9e+02 Score=21.76 Aligned_cols=39 Identities=15% Similarity=0.256 Sum_probs=28.4
Q ss_pred hcHHHHHHHHHhcCCceEEEEEeeccHHHHHHccCCcCceEE
Q 026476 103 EEAKPVIQALKSKGITAIGAAGFCWGAKVVVQLGKREFIQAA 144 (238)
Q Consensus 103 ~d~~~~~~~l~~~~~~~i~l~G~S~GG~~a~~~a~~~~i~a~ 144 (238)
.|+..+++.+++++..+|.+.| ||.+...+.+...++-.
T Consensus 121 ~dl~~~l~~L~~~g~~~i~v~G---G~~l~~~~l~~gLvDEl 159 (200)
T PF01872_consen 121 VDLEEALRRLKERGGKDILVEG---GGSLNGSFLRAGLVDEL 159 (200)
T ss_dssp EHHHHHHHHHHHTTTSEEEEEE---HHHHHHHHHHTT--SEE
T ss_pred cCHHHHHHHHHhcCCCEEEEec---hHHHHHHHHhCCCCCEE
Confidence 3688999999999889999987 77777776655544443
No 359
>cd08181 PPD-like 1,3-propanediol dehydrogenase-like (PPD). 1,3-propanediol dehydrogenase-like (PPD). This family is a member of the iron-containing alcohol dehydrogenase superfamily, and exhibits a dehydroquinate synthase-like fold. Protein sequence similarity search and other biochemical evidences suggest that they are close to the iron-containing 1,3-propanediol dehydrogenase (EC 1.1.1.202). 1,3-propanediol dehydrogenase catalyzes the oxidation of propane-1,3-diol to 3-hydroxypropanal with the simultaneous reduction of NADP+ to NADPH. The protein structure of Thermotoga maritima TM0920 gene contains one NADP+ and one iron ion.
Probab=23.53 E-value=4.5e+02 Score=22.11 Aligned_cols=65 Identities=11% Similarity=0.128 Sum_probs=39.4
Q ss_pred eeEEEEeccCC-CCCchHHHHHHHHHHCCCEEEeccCCCCCccCCCCCcchHhhHhhcCCCcchhcHHHHHHHHHhcCCc
Q 026476 40 LAVLLISDVYG-YEAPNLRKLADKVAAAGFYVAVPDFFHGDPYVADGGKPLQEWIKDHGVDKGFEEAKPVIQALKSKGIT 118 (238)
Q Consensus 40 ~~vl~~hg~~g-~~~~~~~~~a~~l~~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~ 118 (238)
+.++++.+... ........+...|.+.|..+..+|..... -..+++.++++.+++.+.+
T Consensus 26 ~r~lvVt~~~~~~~~g~~~~v~~~L~~~g~~~~~~~~v~~~--------------------p~~~~v~~~~~~~~~~~~D 85 (357)
T cd08181 26 KRALIVTGKSSAKKNGSLDDVTKALEELGIEYEIFDEVEEN--------------------PSLETIMEAVEIAKKFNAD 85 (357)
T ss_pred CEEEEEeCCchHhhcCcHHHHHHHHHHcCCeEEEeCCCCCC--------------------cCHHHHHHHHHHHHhcCCC
Confidence 35666666433 22234567888888888887766531111 1235678888888877666
Q ss_pred eEEEEE
Q 026476 119 AIGAAG 124 (238)
Q Consensus 119 ~i~l~G 124 (238)
-|..+|
T Consensus 86 ~IIavG 91 (357)
T cd08181 86 FVIGIG 91 (357)
T ss_pred EEEEeC
Confidence 555443
No 360
>PRK03094 hypothetical protein; Provisional
Probab=23.52 E-value=1e+02 Score=19.84 Aligned_cols=22 Identities=14% Similarity=0.206 Sum_probs=18.2
Q ss_pred chHHHHHHHHHHCCCEEEeccC
Q 026476 54 PNLRKLADKVAAAGFYVAVPDF 75 (238)
Q Consensus 54 ~~~~~~a~~l~~~G~~v~~~d~ 75 (238)
..+..+.++|.++||.|+-+..
T Consensus 8 ~~Ls~i~~~L~~~GYeVv~l~~ 29 (80)
T PRK03094 8 QSLTDVQQALKQKGYEVVQLRS 29 (80)
T ss_pred cCcHHHHHHHHHCCCEEEecCc
Confidence 3567899999999999997764
No 361
>COG3007 Uncharacterized paraquat-inducible protein B [Function unknown]
Probab=23.19 E-value=1.1e+02 Score=25.31 Aligned_cols=34 Identities=15% Similarity=0.182 Sum_probs=28.1
Q ss_pred hcHHHHHHHHHhc-----CCceEEEEEeeccHHHHHHcc
Q 026476 103 EEAKPVIQALKSK-----GITAIGAAGFCWGAKVVVQLG 136 (238)
Q Consensus 103 ~d~~~~~~~l~~~-----~~~~i~l~G~S~GG~~a~~~a 136 (238)
..+.+-+++++.. +++|+.++|-|-|=.++..++
T Consensus 22 ~nV~~QI~y~k~~gp~~ngPKkVLviGaSsGyGLa~RIs 60 (398)
T COG3007 22 ANVLQQIDYVKAAGPIKNGPKKVLVIGASSGYGLAARIS 60 (398)
T ss_pred HHHHHHHHHHHhcCCccCCCceEEEEecCCcccHHHHHH
Confidence 4577778888876 578999999999998888865
No 362
>cd08171 GlyDH-like2 Glycerol dehydrogenase-like. Glycerol dehydrogenases-like. The proteins in this family have not been characterized, but they show sequence homology with glycerol dehydrogenase. Glycerol dehydrogenases (GlyDH) is a key enzyme in the glycerol dissimilation pathway. In anaerobic conditions, many microorganisms utilize glycerol as a source of carbon through coupled oxidative and reductive pathways. One of the pathways involves the oxidation of glycerol to dihydroxyacetone with the reduction of NAD+ to NADH catalyzed by glycerol dehydrogenases. Dihydroxyacetone is then phosphorylated by dihydroxyacetone kinase and enters the glycolytic pathway for further degradation. The activity of GlyDH is zinc-dependent. The zinc ion plays a role in stabilizing an alkoxide intermediate at the active site.
Probab=23.08 E-value=2.3e+02 Score=23.71 Aligned_cols=64 Identities=14% Similarity=0.207 Sum_probs=37.9
Q ss_pred eeEEEEeccCCCCCchHHHHHHHHHHCCCEEEeccCCCCCccCCCCCcchHhhHhhcCCCcchhcHHHHHHHHHhcCCce
Q 026476 40 LAVLLISDVYGYEAPNLRKLADKVAAAGFYVAVPDFFHGDPYVADGGKPLQEWIKDHGVDKGFEEAKPVIQALKSKGITA 119 (238)
Q Consensus 40 ~~vl~~hg~~g~~~~~~~~~a~~l~~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~ 119 (238)
.-++++++..... .....+.+.|.++|..+..++.+.+.+ ..+.+.++++..++.+.+-
T Consensus 23 ~r~liv~d~~~~~-~~~~~v~~~l~~~~~~~~~~~~~~~~p--------------------~~~~v~~~~~~~~~~~~d~ 81 (345)
T cd08171 23 KKVVVIGGKTALA-AAKDKIKAALEQSGIEITDFIWYGGES--------------------TYENVERLKKNPAVQEADM 81 (345)
T ss_pred CEEEEEeCHHHHH-HHHHHHHHHHHHCCCeEEEEEecCCCC--------------------CHHHHHHHHHHHhhcCCCE
Confidence 3467777643322 334567777888888877666433321 2356677777777666665
Q ss_pred EEEEE
Q 026476 120 IGAAG 124 (238)
Q Consensus 120 i~l~G 124 (238)
|..+|
T Consensus 82 iiavG 86 (345)
T cd08171 82 IFAVG 86 (345)
T ss_pred EEEeC
Confidence 55444
No 363
>PF00289 CPSase_L_chain: Carbamoyl-phosphate synthase L chain, N-terminal domain; InterPro: IPR005481 Carbamoyl phosphate synthase (CPSase) is a heterodimeric enzyme composed of a small and a large subunit (with the exception of CPSase III, see below). CPSase catalyses the synthesis of carbamoyl phosphate from biocarbonate, ATP and glutamine (6.3.5.5 from EC) or ammonia (6.3.4.16 from EC), and represents the first committed step in pyrimidine and arginine biosynthesis in prokaryotes and eukaryotes, and in the urea cycle in most terrestrial vertebrates [, ]. CPSase has three active sites, one in the small subunit and two in the large subunit. The small subunit contains the glutamine binding site and catalyses the hydrolysis of glutamine to glutamate and ammonia. The large subunit has two homologous carboxy phosphate domains, both of which have ATP-binding sites; however, the N-terminal carboxy phosphate domain catalyses the phosphorylation of biocarbonate, while the C-terminal domain catalyses the phosphorylation of the carbamate intermediate []. The carboxy phosphate domain found duplicated in the large subunit of CPSase is also present as a single copy in the biotin-dependent enzymes acetyl-CoA carboxylase (6.4.1.2 from EC) (ACC), propionyl-CoA carboxylase (6.4.1.3 from EC) (PCCase), pyruvate carboxylase (6.4.1.1 from EC) (PC) and urea carboxylase (6.3.4.6 from EC). Most prokaryotes carry one form of CPSase that participates in both arginine and pyrimidine biosynthesis, however certain bacteria can have separate forms. The large subunit in bacterial CPSase has four structural domains: the carboxy phosphate domain 1, the oligomerisation domain, the carbamoyl phosphate domain 2 and the allosteric domain []. CPSase heterodimers from Escherichia coli contain two molecular tunnels: an ammonia tunnel and a carbamate tunnel. These inter-domain tunnels connect the three distinct active sites, and function as conduits for the transport of unstable reaction intermediates (ammonia and carbamate) between successive active sites []. The catalytic mechanism of CPSase involves the diffusion of carbamate through the interior of the enzyme from the site of synthesis within the N-terminal domain of the large subunit to the site of phosphorylation within the C-terminal domain. Eukaryotes have two distinct forms of CPSase: a mitochondrial enzyme (CPSase I) that participates in both arginine biosynthesis and the urea cycle; and a cytosolic enzyme (CPSase II) involved in pyrimidine biosynthesis. CPSase II occurs as part of a multi-enzyme complex along with aspartate transcarbamoylase and dihydroorotase; this complex is referred to as the CAD protein []. The hepatic expression of CPSase is transcriptionally regulated by glucocorticoids and/or cAMP []. There is a third form of the enzyme, CPSase III, found in fish, which uses glutamine as a nitrogen source instead of ammonia []. CPSase III is closely related to CPSase I, and is composed of a single polypeptide that may have arisen from gene fusion of the glutaminase and synthetase domains []. This entry represents the N-terminal domain of the large subunit of carbamoyl phosphate synthase. This domain can also be found in certain other related proteins. ; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 3VA7_A 3OUU_A 3OUZ_B 1W96_B 1W93_A 1ULZ_A 3HB9_C 3HO8_A 3BG5_C 3HBL_A ....
Probab=22.87 E-value=1.2e+02 Score=20.75 Aligned_cols=33 Identities=21% Similarity=0.311 Sum_probs=20.4
Q ss_pred eEEEEeccCCCCCchHHHHHHHHHHCCCEEEecc
Q 026476 41 AVLLISDVYGYEAPNLRKLADKVAAAGFYVAVPD 74 (238)
Q Consensus 41 ~vl~~hg~~g~~~~~~~~~a~~l~~~G~~v~~~d 74 (238)
.+..+|+++|.- .....|++.+.+.|+..+-|+
T Consensus 74 g~~~i~pGyg~l-se~~~fa~~~~~~gi~fiGp~ 106 (110)
T PF00289_consen 74 GADAIHPGYGFL-SENAEFAEACEDAGIIFIGPS 106 (110)
T ss_dssp TESEEESTSSTT-TTHHHHHHHHHHTT-EESSS-
T ss_pred cCcccccccchh-HHHHHHHHHHHHCCCEEECcC
Confidence 466677777753 345677777777777666543
No 364
>COG0426 FpaA Uncharacterized flavoproteins [Energy production and conversion]
Probab=22.85 E-value=5e+02 Score=22.41 Aligned_cols=36 Identities=19% Similarity=0.313 Sum_probs=27.5
Q ss_pred eeEEEEeccCCCCCchHHHHHHHHHHCCCEEEeccC
Q 026476 40 LAVLLISDVYGYEAPNLRKLADKVAAAGFYVAVPDF 75 (238)
Q Consensus 40 ~~vl~~hg~~g~~~~~~~~~a~~l~~~G~~v~~~d~ 75 (238)
.++|+.-..+|+.....+.+++.|.+.|..|.+.+.
T Consensus 248 ~V~l~Y~smyg~T~~ma~aiaegl~~~gv~v~~~~~ 283 (388)
T COG0426 248 KVDLIYDSMYGNTEKMAQAIAEGLMKEGVDVEVINL 283 (388)
T ss_pred eEEEEEecccCCHHHHHHHHHHHhhhcCCceEEEEc
Confidence 455566667787655567888888899999999887
No 365
>cd02022 DPCK Dephospho-coenzyme A kinase (DPCK, EC 2.7.1.24) catalyzes the phosphorylation of dephosphocoenzyme A (dCoA) to yield CoA, which is the final step in CoA biosynthesis.
Probab=22.80 E-value=1.1e+02 Score=22.61 Aligned_cols=32 Identities=16% Similarity=0.158 Sum_probs=24.7
Q ss_pred EEEEeccCCCCCchHHHHHHHHHHCCCEEEeccCC
Q 026476 42 VLLISDVYGYEAPNLRKLADKVAAAGFYVAVPDFF 76 (238)
Q Consensus 42 vl~~hg~~g~~~~~~~~~a~~l~~~G~~v~~~d~~ 76 (238)
+|.+.|..|+.. ..++..|++.|+.|+..|.+
T Consensus 1 ii~itG~~gsGK---st~~~~l~~~g~~~i~~D~~ 32 (179)
T cd02022 1 IIGLTGGIGSGK---STVAKLLKELGIPVIDADKI 32 (179)
T ss_pred CEEEECCCCCCH---HHHHHHHHHCCCCEEecCHH
Confidence 467888888642 46888888899999988873
No 366
>PF00465 Fe-ADH: Iron-containing alcohol dehydrogenase ; InterPro: IPR001670 Alcohol dehydrogenase (1.1.1.1 from EC) (ADH) catalyzes the reversible oxidation of ethanol to acetaldehyde with the concomitant reduction of NAD. Currently three, structurally and catalytically, different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Iron-containing ADH's have been found in yeast (gene ADH4) [], as well as in Zymomonas mobilis (gene adhB) []. These two iron-containing ADH's are closely related to the following enzymes: Escherichia coli propanediol oxidoreductase (1.1.1.77 from EC) (gene fucO) [], an enzyme involved in the metabolism of fucose and which also seems to contain ferrous ion(s). Clostridium acetobutylicum NADPH- and NADH-dependent butanol dehydrogenases (1.1.1 from EC) (genes adh1, bdhA and bdhB) [], an enzyme which has activity using butanol and ethanol as substrates. E. coli adhE [], an iron-dependent enzyme which harbor three different activities: alcohol dehydrogenase, acetaldehyde dehydrogenase (acetylating) (1.2.1.10 from EC) and pyruvate-formate-lyase deactivase. Bacterial glycerol dehydrogenase (1.1.1.6 from EC) (gene gldA or dhaD) []. Clostridium kluyveri NAD-dependent 4-hydroxybutyrate dehydrogenase (4hbd) (1.1.1.61 from EC). Citrobacter freundii and Klebsiella pneumoniae 1,3-propanediol dehydrogenase (1.1.1.202 from EC) (gene dhaT). Bacillus methanolicus NAD-dependent methanol dehydrogenase (1.1.1.244 from EC) []. E. coli and Salmonella typhimurium ethanolamine utilization protein eutG. E. coli hypothetical protein yiaY. ; GO: 0016491 oxidoreductase activity, 0046872 metal ion binding, 0055114 oxidation-reduction process; PDB: 1RRM_A 2BL4_A 2BI4_A 3BFJ_R 1KQ3_A 1JQ5_A 1JPU_A 1JQA_A 3JZD_A 3UHJ_A ....
Probab=22.68 E-value=1.9e+02 Score=24.41 Aligned_cols=64 Identities=23% Similarity=0.280 Sum_probs=41.2
Q ss_pred eEEEEeccCCCCCchHHHHHHHHHHCCCEEEeccCCCCCccCCCCCcchHhhHhhcCCCcchhcHHHHHHHHHhcCCceE
Q 026476 41 AVLLISDVYGYEAPNLRKLADKVAAAGFYVAVPDFFHGDPYVADGGKPLQEWIKDHGVDKGFEEAKPVIQALKSKGITAI 120 (238)
Q Consensus 41 ~vl~~hg~~g~~~~~~~~~a~~l~~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~i 120 (238)
.++++.+..-.....+..+...|.+.|+.+..++.+.+.. ..+++.++++.+++.+.+-|
T Consensus 23 r~lvVt~~~~~~~~~~~~v~~~L~~~~i~~~~~~~~~~~p--------------------~~~~v~~~~~~~~~~~~D~I 82 (366)
T PF00465_consen 23 RVLVVTDPSLSKSGLVDRVLDALEEAGIEVQVFDGVGPNP--------------------TLEDVDEAAEQARKFGADCI 82 (366)
T ss_dssp EEEEEEEHHHHHHTHHHHHHHHHHHTTCEEEEEEEESSS---------------------BHHHHHHHHHHHHHTTSSEE
T ss_pred CEEEEECchHHhCccHHHHHHHHhhCceEEEEEecCCCCC--------------------cHHHHHHHHHHHHhcCCCEE
Confidence 4555555421111246778888888999998888422222 34788899999988877765
Q ss_pred EEEE
Q 026476 121 GAAG 124 (238)
Q Consensus 121 ~l~G 124 (238)
..+|
T Consensus 83 IaiG 86 (366)
T PF00465_consen 83 IAIG 86 (366)
T ss_dssp EEEE
T ss_pred EEcC
Confidence 5554
No 367
>COG4874 Uncharacterized protein conserved in bacteria containing a pentein-type domain [Function unknown]
Probab=22.62 E-value=2.4e+02 Score=22.55 Aligned_cols=28 Identities=21% Similarity=0.294 Sum_probs=21.9
Q ss_pred HHHHHHHHHHCCCEEEeccCCCCCccCCC
Q 026476 56 LRKLADKVAAAGFYVAVPDFFHGDPYVAD 84 (238)
Q Consensus 56 ~~~~a~~l~~~G~~v~~~d~~~g~~~~~~ 84 (238)
+..++..|.+.|..|.++|. -|.+.++.
T Consensus 59 f~amve~L~~~GvdV~ifdd-tg~~~TPD 86 (318)
T COG4874 59 FNAMVEGLRQAGVDVVIFDD-TGQGETPD 86 (318)
T ss_pred HHHHHHHHHhcCceEEEeec-CCCCCCCc
Confidence 34567778899999999998 77766554
No 368
>CHL00072 chlL photochlorophyllide reductase subunit L
Probab=22.50 E-value=84 Score=25.61 Aligned_cols=21 Identities=14% Similarity=-0.024 Sum_probs=18.7
Q ss_pred hHHHHHHHHHHCCCEEEeccC
Q 026476 55 NLRKLADKVAAAGFYVAVPDF 75 (238)
Q Consensus 55 ~~~~~a~~l~~~G~~v~~~d~ 75 (238)
....+|..|++.|+.|+++|.
T Consensus 16 ta~nLA~~La~~G~rVLlID~ 36 (290)
T CHL00072 16 TSCNISIALARRGKKVLQIGC 36 (290)
T ss_pred HHHHHHHHHHHCCCeEEEEec
Confidence 446899999999999999998
No 369
>PF03698 UPF0180: Uncharacterised protein family (UPF0180); InterPro: IPR005370 The members of this family are small uncharacterised proteins.
Probab=22.45 E-value=1.1e+02 Score=19.71 Aligned_cols=22 Identities=14% Similarity=0.243 Sum_probs=18.8
Q ss_pred chHHHHHHHHHHCCCEEEeccC
Q 026476 54 PNLRKLADKVAAAGFYVAVPDF 75 (238)
Q Consensus 54 ~~~~~~a~~l~~~G~~v~~~d~ 75 (238)
..+..+.++|.++||.|+-++.
T Consensus 8 ~~Ls~v~~~L~~~GyeVv~l~~ 29 (80)
T PF03698_consen 8 EGLSNVKEALREKGYEVVDLEN 29 (80)
T ss_pred CCchHHHHHHHHCCCEEEecCC
Confidence 3467899999999999999885
No 370
>cd01819 Patatin_and_cPLA2 Patatins and Phospholipases. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates. This family also includes the catalytic domain of cytosolic phospholipase A2 (PLA2; EC 3.1.1.4) hydrolyzes the sn-2-acyl ester bond of phospholipids to release arachidonic acid. At the active site, cPLA2 contains a serine nucleophile through which the catalytic mechanism is initiated. The active site is partially covered by a solvent-accessible flexible lid. cPLA2 displays interfacial activation as it exists in both "closed lid" and "open lid" forms.
Probab=22.41 E-value=94 Score=22.54 Aligned_cols=29 Identities=34% Similarity=0.352 Sum_probs=21.3
Q ss_pred HHHHHHhcCC--ceEEEEEeeccHHHHHHcc
Q 026476 108 VIQALKSKGI--TAIGAAGFCWGAKVVVQLG 136 (238)
Q Consensus 108 ~~~~l~~~~~--~~i~l~G~S~GG~~a~~~a 136 (238)
+++.+.+++. .--.+.|.|.|+.++..++
T Consensus 16 vl~~l~~~~~~~~~~~~~G~SaGa~~~~~~~ 46 (155)
T cd01819 16 VLSALAERGLLDCVTYLAGTSGGAWVAATLY 46 (155)
T ss_pred HHHHHHHhCCccCCCEEEEEcHHHHHHHHHh
Confidence 4555555543 4556889999999999987
No 371
>PF10566 Glyco_hydro_97: Glycoside hydrolase 97 ; InterPro: IPR019563 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This is the 97th family of glycosidases, in this case bacterial. The central part of the GH97 family protein sequences represents a typical and complete (beta/alpha)8-barrel or catalytic TIM-barrel type domain. The N- and C-terminal parts of the sequences, mainly consisting of beta-strands, most probably form two additional non-catalytic domains with as yet unknown functions. The non-catalytic domains of glycosidases from the alpha-galactosidase and alpha-glucosidase superfamilies are also predominantly composed of beta-strands, and at least some of these domains are involved in oligomerisation and carbohydrate binding. In all known glycosidases with the (beta-alpha)8-barrel fold, the amino acid residues at the active site are located on the C-termini of the beta-strands []. ; PDB: 2JKP_A 2JKE_A 2D73_B 2ZQ0_B 2JKA_A 3A24_A.
Probab=22.34 E-value=3.7e+02 Score=21.90 Aligned_cols=68 Identities=15% Similarity=-0.065 Sum_probs=40.7
Q ss_pred CCchHHHHHHHHHHCCCEEEeccCCCCCccCCCCCcchHhhHhhcCCCcchhcHHHHHHHHHhcCCceEEEEEeecc
Q 026476 52 EAPNLRKLADKVAAAGFYVAVPDFFHGDPYVADGGKPLQEWIKDHGVDKGFEEAKPVIQALKSKGITAIGAAGFCWG 128 (238)
Q Consensus 52 ~~~~~~~~a~~l~~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~i~l~G~S~G 128 (238)
+....+.+.+.-++.|+--+.+|--.-...... .. .........|+.+++++.++++ -.|.|+.||-+
T Consensus 30 ~t~~~k~yIDfAa~~G~eYvlvD~GW~~~~~~~-~~-------d~~~~~~~~dl~elv~Ya~~Kg-Vgi~lw~~~~~ 97 (273)
T PF10566_consen 30 TTETQKRYIDFAAEMGIEYVLVDAGWYGWEKDD-DF-------DFTKPIPDFDLPELVDYAKEKG-VGIWLWYHSET 97 (273)
T ss_dssp SHHHHHHHHHHHHHTT-SEEEEBTTCCGS--TT-T---------TT-B-TT--HHHHHHHHHHTT--EEEEEEECCH
T ss_pred CHHHHHHHHHHHHHcCCCEEEeccccccccccc-cc-------cccccCCccCHHHHHHHHHHcC-CCEEEEEeCCc
Confidence 346678899988899999888886211100000 00 1111223478999999999975 37889999988
No 372
>cd08193 HVD 5-hydroxyvalerate dehydrogenase (HVD) catalyzes the oxidation of 5-hydroxyvalerate to 5-oxovalerate with NAD+ as cofactor. 5-hydroxyvalerate dehydrogenase (HVD) is an iron-containing (type III) NAD-dependent alcohol dehydrogenase. It plays a role in the cyclopentanol metabolism biochemical pathway. It catalyzes the oxidation of 5-hydroxyvalerate to 5-oxovalerate with NAD+ as cofactor. This cyclopentanol (cpn) degradation pathway is present in some bacteria which can use cyclopentanol as sole carbon source. In Comamonas sp. strain NCIMB 9872, this enzyme is encoded by the CpnD gene.
Probab=22.23 E-value=4.9e+02 Score=22.05 Aligned_cols=65 Identities=23% Similarity=0.221 Sum_probs=38.1
Q ss_pred eeEEEEeccCCCCCchHHHHHHHHHHCCCEEEeccCCCCCccCCCCCcchHhhHhhcCCCcchhcHHHHHHHHHhcCCce
Q 026476 40 LAVLLISDVYGYEAPNLRKLADKVAAAGFYVAVPDFFHGDPYVADGGKPLQEWIKDHGVDKGFEEAKPVIQALKSKGITA 119 (238)
Q Consensus 40 ~~vl~~hg~~g~~~~~~~~~a~~l~~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~ 119 (238)
..++++.+..-.....+..+...|.+.|..+..++..... -..+.+.++++.+++.+.+-
T Consensus 27 ~~~livt~~~~~~~~~~~~v~~~L~~~~~~~~~~~~v~~~--------------------p~~~~v~~~~~~~~~~~~D~ 86 (376)
T cd08193 27 KRVLVVTDPGILKAGLIDPLLASLEAAGIEVTVFDDVEAD--------------------PPEAVVEAAVEAARAAGADG 86 (376)
T ss_pred CeEEEEcCcchhhCccHHHHHHHHHHcCCeEEEECCCCCC--------------------cCHHHHHHHHHHHHhcCCCE
Confidence 3456666532112235677888888888877665531111 12366778888887766665
Q ss_pred EEEEE
Q 026476 120 IGAAG 124 (238)
Q Consensus 120 i~l~G 124 (238)
|.-+|
T Consensus 87 IIaiG 91 (376)
T cd08193 87 VIGFG 91 (376)
T ss_pred EEEeC
Confidence 54443
No 373
>PRK07053 glutamine amidotransferase; Provisional
Probab=22.19 E-value=3.9e+02 Score=20.97 Aligned_cols=90 Identities=20% Similarity=0.206 Sum_probs=42.1
Q ss_pred EEEEeccCCCCCchHHHHHHHHHHCCCEEEeccCCCCCccCCCCCcchHhh------HhhcCCCcchhcHHHHHHHHHhc
Q 026476 42 VLLISDVYGYEAPNLRKLADKVAAAGFYVAVPDFFHGDPYVADGGKPLQEW------IKDHGVDKGFEEAKPVIQALKSK 115 (238)
Q Consensus 42 vl~~hg~~g~~~~~~~~~a~~l~~~G~~v~~~d~~~g~~~~~~~~~~~~~~------~~~~~~~~~~~d~~~~~~~l~~~ 115 (238)
|+++.+.... ....+++.|...|+.+-+.....+....+.. ...... ...++ +.....+....++++..
T Consensus 5 ilviqh~~~e---~~g~i~~~L~~~g~~~~v~~~~~~~~~~~~~-~~~d~lii~Ggp~~~~d-~~~~p~~~~~~~~i~~~ 79 (234)
T PRK07053 5 AVAIRHVAFE---DLGSFEQVLGARGYRVRYVDVGVDDLETLDA-LEPDLLVVLGGPIGVYD-DELYPFLAPEIALLRQR 79 (234)
T ss_pred EEEEECCCCC---CChHHHHHHHHCCCeEEEEecCCCccCCCCc-cCCCEEEECCCCCCCCC-CCcCCcHHHHHHHHHHH
Confidence 5555554332 2346888888889877666542221101100 000000 00001 00011233344444332
Q ss_pred CCceEEEEEeeccHHHHHHcc
Q 026476 116 GITAIGAAGFCWGAKVVVQLG 136 (238)
Q Consensus 116 ~~~~i~l~G~S~GG~~a~~~a 136 (238)
-...+=++|.|+|..+.....
T Consensus 80 ~~~~~PvlGIC~G~Qlla~al 100 (234)
T PRK07053 80 LAAGLPTLGICLGAQLIARAL 100 (234)
T ss_pred HHCCCCEEEECccHHHHHHHc
Confidence 112345999999999988865
No 374
>COG0062 Uncharacterized conserved protein [Function unknown]
Probab=22.13 E-value=2.3e+02 Score=21.92 Aligned_cols=36 Identities=22% Similarity=0.144 Sum_probs=26.5
Q ss_pred CeeEEEEeccCCCCCchHHHHHHHHHHCCCEEEeccC
Q 026476 39 KLAVLLISDVYGYEAPNLRKLADKVAAAGFYVAVPDF 75 (238)
Q Consensus 39 ~~~vl~~hg~~g~~~~~~~~~a~~l~~~G~~v~~~d~ 75 (238)
.+.|+++.|..++ ..+-.-.|++|...|+.|.++-.
T Consensus 49 ~~~v~vlcG~GnN-GGDG~VaAR~L~~~G~~V~v~~~ 84 (203)
T COG0062 49 ARRVLVLCGPGNN-GGDGLVAARHLKAAGYAVTVLLL 84 (203)
T ss_pred CCEEEEEECCCCc-cHHHHHHHHHHHhCCCceEEEEe
Confidence 4558888876444 45556789999999988887765
No 375
>PF08484 Methyltransf_14: C-methyltransferase C-terminal domain; InterPro: IPR013691 This domain is found in bacterial C-methyltransferase proteins, often together with other methyltransferase domains such as IPR013216 from INTERPRO or IPR013217 from INTERPRO. ; PDB: 4E2X_A 3NDJ_A 3NDI_A 4E32_A 4E33_A 4E31_A 4E2Y_A 4E2W_A 4E2Z_A 4E30_A.
Probab=22.07 E-value=1.4e+02 Score=21.91 Aligned_cols=47 Identities=15% Similarity=0.105 Sum_probs=25.2
Q ss_pred chhcHHHHHHHHHhcCCceEEEEEeeccHHHHHHccC--CcCceEEEEec
Q 026476 101 GFEEAKPVIQALKSKGITAIGAAGFCWGAKVVVQLGK--REFIQAAVLLH 148 (238)
Q Consensus 101 ~~~d~~~~~~~l~~~~~~~i~l~G~S~GG~~a~~~a~--~~~i~a~i~~~ 148 (238)
..+++.+.++.++.. ..+|+++|-|..|.+-+.+.. ...|..++=..
T Consensus 53 ~~~~l~~~L~~~~~~-gk~I~~yGA~~kg~tlln~~g~~~~~I~~vvD~n 101 (160)
T PF08484_consen 53 SKAELREFLEKLKAE-GKRIAGYGAGAKGNTLLNYFGLDNDLIDYVVDDN 101 (160)
T ss_dssp HHHHHHHHHHHHHHT-T--EEEE---SHHHHHHHHHT--TTTS--EEES-
T ss_pred HHHHHHHHHHHHHHc-CCEEEEECcchHHHHHHHHhCCCcceeEEEEeCC
Confidence 344455555555554 478999999999998888663 33466666543
No 376
>TIGR03371 cellulose_yhjQ cellulose synthase operon protein YhjQ. Members of this family are the YhjQ protein, found immediately upsteam of bacterial cellulose synthase (bcs) genes in a broad range of bacteria, including both copies of the bcs locus in Klebsiella pneumoniae. In several species it is seen clearly as part of the bcs operon. It is identified as a probable component of the bacterial cellulose metabolic process not only by gene location, but also by partial phylogenetic profiling, or Haft-Selengut algorithm (PubMed:16930487), based on a bacterial cellulose biosynthesis genome property profile. Cellulose plays an important role in biofilm formation and structural integrity in some bacteria. Mutants in yhjQ in Escherichia coli, show altered morphology an growth, but the function of YhjQ has not yet been determined.
Probab=22.05 E-value=1.4e+02 Score=23.11 Aligned_cols=24 Identities=21% Similarity=0.101 Sum_probs=19.9
Q ss_pred hHHHHHHHHHHCCCEEEeccCCCCC
Q 026476 55 NLRKLADKVAAAGFYVAVPDFFHGD 79 (238)
Q Consensus 55 ~~~~~a~~l~~~G~~v~~~d~~~g~ 79 (238)
-...+|..|++.|+.|+++|. ..+
T Consensus 18 ~a~nla~~la~~g~~VlliD~-D~q 41 (246)
T TIGR03371 18 LTANLASALKLLGEPVLAIDL-DPQ 41 (246)
T ss_pred HHHHHHHHHHhCCCcEEEEeC-CCc
Confidence 346899999999999999998 443
No 377
>cd02033 BchX Chlorophyllide reductase converts chlorophylls into bacteriochlorophylls by reducing the chlorin B-ring. This family contains the X subunit of this three-subunit enzyme. Sequence and structure similarity between bchX, protochlorophyllide reductase L subunit (bchL and chlL) and nitrogenase Fe protein (nifH gene) suggest their functional similarity. Members of the BchX family serve as the unique electron donors to their respective catalytic subunits (bchN-bchB, bchY-bchZ and nitrogenase component 1). Mechanistically, they hydrolyze ATP and transfer electrons through a Fe4-S4 cluster.
Probab=21.97 E-value=2e+02 Score=24.12 Aligned_cols=36 Identities=19% Similarity=0.113 Sum_probs=24.6
Q ss_pred eeEEEEeccCCCCC-chHHHHHHHHHHCCCEEEeccC
Q 026476 40 LAVLLISDVYGYEA-PNLRKLADKVAAAGFYVAVPDF 75 (238)
Q Consensus 40 ~~vl~~hg~~g~~~-~~~~~~a~~l~~~G~~v~~~d~ 75 (238)
.-+|.+.|-.|... .-...++..|+++|+.|+++|.
T Consensus 31 ~~ii~v~gkgG~GKSt~a~nLa~~la~~g~rVllid~ 67 (329)
T cd02033 31 TQIIAIYGKGGIGKSFTLANLSYMMAQQGKRVLLIGC 67 (329)
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEEe
Confidence 34555556444322 2235789999999999999887
No 378
>TIGR01303 IMP_DH_rel_1 IMP dehydrogenase family protein. This model represents a family of proteins, often annotated as a putative IMP dehydrogenase, related to IMP dehydrogenase and GMP reductase and restricted to the high GC Gram-positive bacteria. All species in which a member is found so far (Corynebacterium glutamicum, Mycobacterium tuberculosis, Streptomyces coelicolor, etc.) also have IMP dehydrogenase as described by TIGRFAMs entry TIGR01302.
Probab=21.84 E-value=3.8e+02 Score=23.76 Aligned_cols=61 Identities=25% Similarity=0.180 Sum_probs=39.5
Q ss_pred chHHHHHHHHHHCCCEEEeccCCCCCccCCCCCcchHhhHhhcCCCcchhcHHHHHHHHHhcCCceEEEEEeeccHHHHH
Q 026476 54 PNLRKLADKVAAAGFYVAVPDFFHGDPYVADGGKPLQEWIKDHGVDKGFEEAKPVIQALKSKGITAIGAAGFCWGAKVVV 133 (238)
Q Consensus 54 ~~~~~~a~~l~~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~i~l~G~S~GG~~a~ 133 (238)
.....++..|.++|..++++|.-+|++ +.+.+.++++++.-++...++|+.+-.-.+.
T Consensus 224 ~~~~~ra~~Lv~aGVd~i~~D~a~g~~----------------------~~~~~~i~~i~~~~~~~~vi~g~~~t~~~~~ 281 (475)
T TIGR01303 224 GDVGGKAKALLDAGVDVLVIDTAHGHQ----------------------VKMISAIKAVRALDLGVPIVAGNVVSAEGVR 281 (475)
T ss_pred ccHHHHHHHHHHhCCCEEEEeCCCCCc----------------------HHHHHHHHHHHHHCCCCeEEEeccCCHHHHH
Confidence 456789999999999999999743332 2355566666665334445556666555555
Q ss_pred Hcc
Q 026476 134 QLG 136 (238)
Q Consensus 134 ~~a 136 (238)
.+.
T Consensus 282 ~l~ 284 (475)
T TIGR01303 282 DLL 284 (475)
T ss_pred HHH
Confidence 544
No 379
>TIGR00682 lpxK tetraacyldisaccharide 4'-kinase. Also called lipid-A 4'-kinase. This essential gene encodes an enzyme in the pathway of lipid A biosynthesis in Gram-negative organisms. A single copy of this protein is found in Gram-negative bacteria. PSI-BLAST converges on this set of apparent orthologs without identifying any other homologs.
Probab=21.72 E-value=1.4e+02 Score=24.84 Aligned_cols=33 Identities=24% Similarity=0.211 Sum_probs=25.7
Q ss_pred ccCCCCCchHHHHHHHHHHCCCEEEeccCCCCCccC
Q 026476 47 DVYGYEAPNLRKLADKVAAAGFYVAVPDFFHGDPYV 82 (238)
Q Consensus 47 g~~g~~~~~~~~~a~~l~~~G~~v~~~d~~~g~~~~ 82 (238)
|+.|. .+....+++.|.++|+.+.++. ||++..
T Consensus 39 GGTGK-TP~v~~La~~l~~~G~~~~IlS--RGYg~~ 71 (311)
T TIGR00682 39 GGTGK-TPVVVWLAELLKDRGLRVGVLS--RGYGSK 71 (311)
T ss_pred CCcCh-HHHHHHHHHHHHHCCCEEEEEC--CCCCCC
Confidence 55565 3677899999999999999888 677653
No 380
>cd08188 Fe-ADH4 Iron-containing alcohol dehydrogenases-like. Iron-containing alcohol dehydrogenase-like. Alcohol dehydrogenase catalyzes the reduction of acetaldehyde to alcohol with NADP as cofactor. Its activity requires iron ions. The protein structure represents a dehydroquinate synthase-like fold and is belonged to the alcohol dehydrogenase-like superfamily. They are distinct from other alcohol dehydrogenases which contain different protein domains. Proteins of this family have not been characterized. Their specific function is unknown.
Probab=21.66 E-value=5e+02 Score=22.01 Aligned_cols=65 Identities=23% Similarity=0.157 Sum_probs=37.0
Q ss_pred eeEEEEeccCCCCCchHHHHHHHHHHCCCEEEeccCCCCCccCCCCCcchHhhHhhcCCCcchhcHHHHHHHHHhcCCce
Q 026476 40 LAVLLISDVYGYEAPNLRKLADKVAAAGFYVAVPDFFHGDPYVADGGKPLQEWIKDHGVDKGFEEAKPVIQALKSKGITA 119 (238)
Q Consensus 40 ~~vl~~hg~~g~~~~~~~~~a~~l~~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~ 119 (238)
..++++.+..-........+...|.+.|+.+..++-.... -..+++.+.++.+++.+.+-
T Consensus 29 ~~~livt~~~~~~~~~~~~v~~~L~~~~~~~~~~~~v~~~--------------------p~~~~v~~~~~~~~~~~~d~ 88 (377)
T cd08188 29 KKVLLVSDPGVIKAGWVDRVIESLEEAGLEYVVFSDVSPN--------------------PRDEEVMAGAELYLENGCDV 88 (377)
T ss_pred CeEEEEeCcchhhCccHHHHHHHHHHcCCeEEEeCCCCCC--------------------CCHHHHHHHHHHHHhcCCCE
Confidence 3456666533222234567888888888877665521111 12356777777777766665
Q ss_pred EEEEE
Q 026476 120 IGAAG 124 (238)
Q Consensus 120 i~l~G 124 (238)
|..+|
T Consensus 89 IIaiG 93 (377)
T cd08188 89 IIAVG 93 (377)
T ss_pred EEEeC
Confidence 55443
No 381
>PF09370 TIM-br_sig_trns: TIM-barrel signal transduction protein; InterPro: IPR009215 Members of this family are predicted to have a TIM barrel fold, based on PSI-BLAST analysis (iteration 4) and on SCOP prediction (using SMART). Interestingly, this novel domain also exists as an N-terminal domain of sigma54-dependent transcriptional activators (enhancer-binding proteins). Because sigma54 dependent activators typically have a three-domain structure: the variable N-terminal regulatory (activation) domain involved in signal recognition/receiving, the central AAA-type ATPase domain, and the DNA-binding domain (see PIRSF003187 from PIRSF, PIRSF005263 from PIRSF, PIRSF003184 from PIRSF, PIRSF005263 from PIRSF, IPR014443 from INTERPRO for details), the proteins of the current entry may be predicted to play a role in signal recognition/receiving and signal transduction.; PDB: 2P10_C.
Probab=21.39 E-value=1.1e+02 Score=24.81 Aligned_cols=93 Identities=14% Similarity=0.182 Sum_probs=48.4
Q ss_pred HHHHHHHhcCCceEEEEEeeccHHHHHHccCCcCceEEEEeccCCc------------C------------cccccccC-
Q 026476 107 PVIQALKSKGITAIGAAGFCWGAKVVVQLGKREFIQAAVLLHPSFV------------T------------VDDIKGVE- 161 (238)
Q Consensus 107 ~~~~~l~~~~~~~i~l~G~S~GG~~a~~~a~~~~i~a~i~~~~~~~------------~------------~~~~~~~~- 161 (238)
++++.++++-..+--++|-+.|..++...+....++-++.++...+ + .+-++.++
T Consensus 2 eil~~l~~~i~~~~pIig~gaGtGlsAk~ae~gGaDlI~~ynsGrfR~~G~~SlagllpygnaN~iv~em~~eiLp~v~~ 81 (268)
T PF09370_consen 2 EILDRLRAQIKAGKPIIGAGAGTGLSAKCAEKGGADLILIYNSGRFRMAGRGSLAGLLPYGNANEIVMEMAREILPVVKD 81 (268)
T ss_dssp HHHHHHHHHHHTT--EEEEEESSHHHHHHHHHTT-SEEEE-HHHHHHHTT--GGGGGBTEEEHHHHHHHHHHHHGGG-SS
T ss_pred hHHHHHHHHHhCCCceEEEeeccchhhHHHHhcCCCEEEEecchhHhhCCCcchhhhhcccCHhHHHHHHHHhhhhhccC
Confidence 4555665541122347888999999999987777888887754321 1 11134443
Q ss_pred CcEEEEecCCCCCCCHHhHHHHHHHHhhcCCCCceEEEcCCCC
Q 026476 162 VPLSILGAEIDRLSPPALVKEFEEALNAKSGVDSFVKIFPKVA 204 (238)
Q Consensus 162 ~P~L~i~g~~D~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 204 (238)
.|++.=....||+.. ...+.+.++ ..|.. =+.-||..+
T Consensus 82 tPViaGv~atDP~~~---~~~fl~~lk-~~Gf~-GV~NfPTvg 119 (268)
T PF09370_consen 82 TPVIAGVCATDPFRD---MDRFLDELK-ELGFS-GVQNFPTVG 119 (268)
T ss_dssp S-EEEEE-TT-TT-----HHHHHHHHH-HHT-S-EEEE-S-GG
T ss_pred CCEEEEecCcCCCCc---HHHHHHHHH-HhCCc-eEEECCcce
Confidence 799998888998764 455556663 33321 144577443
No 382
>PRK08105 flavodoxin; Provisional
Probab=21.21 E-value=3.2e+02 Score=19.63 Aligned_cols=34 Identities=21% Similarity=0.178 Sum_probs=20.9
Q ss_pred EEEEec-cCCCCCchHHHHHHHHHHCCCEEEeccC
Q 026476 42 VLLISD-VYGYEAPNLRKLADKVAAAGFYVAVPDF 75 (238)
Q Consensus 42 vl~~hg-~~g~~~~~~~~~a~~l~~~G~~v~~~d~ 75 (238)
|+++.+ -.|+....-..+++.+.+.|+.|.+.+.
T Consensus 4 i~I~YgS~tGnte~~A~~l~~~l~~~g~~~~~~~~ 38 (149)
T PRK08105 4 VGIFVGTVYGNALLVAEEAEAILTAQGHEVTLFED 38 (149)
T ss_pred EEEEEEcCchHHHHHHHHHHHHHHhCCCceEEech
Confidence 334443 4455433345677777778998887775
No 383
>PRK09004 FMN-binding protein MioC; Provisional
Probab=21.19 E-value=3.2e+02 Score=19.57 Aligned_cols=34 Identities=24% Similarity=0.231 Sum_probs=19.4
Q ss_pred EEEEeccCCCCCchHHHHHHHHHHCCCEEEeccC
Q 026476 42 VLLISDVYGYEAPNLRKLADKVAAAGFYVAVPDF 75 (238)
Q Consensus 42 vl~~hg~~g~~~~~~~~~a~~l~~~G~~v~~~d~ 75 (238)
.|++..-.|+....-..+++.+.+.|+.|-+.+.
T Consensus 5 ~I~ygS~tGnae~~A~~l~~~~~~~g~~~~~~~~ 38 (146)
T PRK09004 5 TLISGSTLGGAEYVADHLAEKLEEAGFSTETLHG 38 (146)
T ss_pred EEEEEcCchHHHHHHHHHHHHHHHcCCceEEecc
Confidence 3443334455433335566667677888776665
No 384
>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=21.04 E-value=2e+02 Score=24.12 Aligned_cols=39 Identities=21% Similarity=0.288 Sum_probs=29.2
Q ss_pred CeeEEEE-eccCCCCCchHHHHHHHHHHCCCEEEeccCCCC
Q 026476 39 KLAVLLI-SDVYGYEAPNLRKLADKVAAAGFYVAVPDFFHG 78 (238)
Q Consensus 39 ~~~vl~~-hg~~g~~~~~~~~~a~~l~~~G~~v~~~d~~~g 78 (238)
.+.+|++ |..++.....-..++..|+++|+.|+-++. .|
T Consensus 4 ~~~~~~~~~~~w~~~~~~~qhl~~~~a~~~~~vl~v~~-~~ 43 (373)
T cd04950 4 RPDILVFSADDWDFLWQRPQHLAARLAERGNRVLYVEP-PG 43 (373)
T ss_pred CCeEEEecccCcCCCCCCHHHHHHHHHhCCCeEEEEeC-CC
Confidence 3556666 556665456678999999999999998887 44
No 385
>PRK05625 5-amino-6-(5-phosphoribosylamino)uracil reductase; Validated
Probab=20.94 E-value=2.6e+02 Score=21.47 Aligned_cols=43 Identities=14% Similarity=0.295 Sum_probs=32.1
Q ss_pred hcHHHHHHHHHhcCCceEEEEEeeccHHHHHHccCCcCceEEEEec
Q 026476 103 EEAKPVIQALKSKGITAIGAAGFCWGAKVVVQLGKREFIQAAVLLH 148 (238)
Q Consensus 103 ~d~~~~~~~l~~~~~~~i~l~G~S~GG~~a~~~a~~~~i~a~i~~~ 148 (238)
.|+.++++.+++++..+|.+.| ||.++..+.....++-.++..
T Consensus 127 ~dl~~~l~~L~~~g~~~vlveG---G~~l~~~fl~~~LvDel~l~i 169 (217)
T PRK05625 127 VDLPDLLEDLYERGIKRLMVEG---GGTLIWSMFKEGLVDEVRVTV 169 (217)
T ss_pred cCHHHHHHHHHHCCCCEEEEec---CHHHHHHHHHCCCCcEEEEEE
Confidence 4678888888888888888877 778888777666666665543
No 386
>cd07222 Pat_PNPLA4 Patatin-like phospholipase domain containing protein 4. PNPLA4, also known as GS2 (gene sequence-2), shows both lipase and transacylation activities. GS2 lipase is expressed in various tissues, predominantly in muscle and adipocytes tissue. It is also expressed in keratinocytes and shows retinyl ester hydrolase, acylglycerol, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: GS2 from mammals, PNPLA4 (Patatin-like phospholipase domain-containing protein 4), and iPLA2-eta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=20.79 E-value=1e+02 Score=24.49 Aligned_cols=31 Identities=26% Similarity=0.199 Sum_probs=22.6
Q ss_pred HHHHHHHhcCCc---eE-EEEEeeccHHHHHHccC
Q 026476 107 PVIQALKSKGIT---AI-GAAGFCWGAKVVVQLGK 137 (238)
Q Consensus 107 ~~~~~l~~~~~~---~i-~l~G~S~GG~~a~~~a~ 137 (238)
.+++.+.+++.. ++ .+.|-|.|+..+..++.
T Consensus 16 GVl~~L~e~g~~l~~~~~~i~GtSaGAl~aa~~a~ 50 (246)
T cd07222 16 GAAKALLRHGKKLLKRVKRFAGASAGSLVAAVLLT 50 (246)
T ss_pred HHHHHHHHcCchhhccCCEEEEECHHHHHHHHHhc
Confidence 456666666542 23 79999999999999874
No 387
>cd02036 MinD Bacterial cell division requires the formation of a septum at mid-cell. The site is determined by the min operon products MinC, MinD and MinE. MinC is a nonspecific inhibitor of the septum protein FtsZ. MinE is the supressor of MinC. MinD plays a pivotal role, selecting the mid-cell over other sites through the activation and regulation of MinC and MinE. MinD is a membrane-associated ATPase, related to nitrogenase iron protein. More distantly related proteins include flagellar biosynthesis proteins and ParA chromosome partitioning proteins. MinD is a monomer.
Probab=20.72 E-value=1.1e+02 Score=22.26 Aligned_cols=22 Identities=23% Similarity=0.321 Sum_probs=18.8
Q ss_pred chHHHHHHHHHHCCCEEEeccC
Q 026476 54 PNLRKLADKVAAAGFYVAVPDF 75 (238)
Q Consensus 54 ~~~~~~a~~l~~~G~~v~~~d~ 75 (238)
.-...++..|+++|+.|+.+|.
T Consensus 15 t~a~~la~~l~~~g~~vllvD~ 36 (179)
T cd02036 15 TTTANLGTALAQLGYKVVLIDA 36 (179)
T ss_pred HHHHHHHHHHHhCCCeEEEEeC
Confidence 3446899999999999999987
No 388
>COG0084 TatD Mg-dependent DNase [DNA replication, recombination, and repair]
Probab=20.68 E-value=2.6e+02 Score=22.47 Aligned_cols=51 Identities=24% Similarity=0.178 Sum_probs=41.2
Q ss_pred chhcHHHHHHHHHhcCCceEEEEEeeccHHH-HHHcc-CCcCceEEEEeccCC
Q 026476 101 GFEEAKPVIQALKSKGITAIGAAGFCWGAKV-VVQLG-KREFIQAAVLLHPSF 151 (238)
Q Consensus 101 ~~~d~~~~~~~l~~~~~~~i~l~G~S~GG~~-a~~~a-~~~~i~a~i~~~~~~ 151 (238)
..+|..++++..++.+..++.++|.+....- ++.++ ..+.+-+++.++|..
T Consensus 15 ~~~d~~~vi~~a~~~gv~~~~~~g~~~~~~~~~~~la~~y~~v~~~~G~HP~~ 67 (256)
T COG0084 15 FDEDRDEVIARAREAGVKKMVVVGTDLEDFKRALELAEKYPNVYAAVGVHPLD 67 (256)
T ss_pred hcCCHHHHHHHHHHcCCcEEEEeecCHHHHHHHHHHHHhCCCeEEEEeeCCCc
Confidence 4457788888888888899999999999888 44477 567888888888876
No 389
>cd02117 NifH_like This family contains the NifH (iron protein) of nitrogenase, L subunit (BchL/ChlL) of the protochlorophyllide reductase and the BchX subunit of the Chlorophyllide reductase. Members of this family use energey from ATP hydrolysis and transfer electrons through a Fe4-S4 cluster to other subunit for reduction of substrate.
Probab=20.68 E-value=77 Score=24.25 Aligned_cols=23 Identities=17% Similarity=0.101 Sum_probs=19.5
Q ss_pred HHHHHHHHHHCCCEEEeccCCCCC
Q 026476 56 LRKLADKVAAAGFYVAVPDFFHGD 79 (238)
Q Consensus 56 ~~~~a~~l~~~G~~v~~~d~~~g~ 79 (238)
...+|..|++.|+.|+++|. .-+
T Consensus 17 ~~nLA~~la~~G~rvLliD~-D~q 39 (212)
T cd02117 17 SQNLSAALAEMGKKVLQVGC-DPK 39 (212)
T ss_pred HHHHHHHHHHCCCcEEEEeC-CCC
Confidence 46899999999999999997 433
No 390
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=20.64 E-value=3.3e+02 Score=25.01 Aligned_cols=62 Identities=19% Similarity=0.222 Sum_probs=38.5
Q ss_pred CeeEEEEeccCCCC--CchHHHHHHHHHHCCCEEEeccCC-CCCccCCCCCcchHhhHhhcCCCcchhcHHHHHHHHHh
Q 026476 39 KLAVLLISDVYGYE--APNLRKLADKVAAAGFYVAVPDFF-HGDPYVADGGKPLQEWIKDHGVDKGFEEAKPVIQALKS 114 (238)
Q Consensus 39 ~~~vl~~hg~~g~~--~~~~~~~a~~l~~~G~~v~~~d~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~ 114 (238)
..++||+||....+ ......+.+.|..+|..|-..-+. .+|+.+. ++....-+..+++|+++
T Consensus 551 ~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p~e~H~~~~--------------~~~~~~~~~~~~~~~~~ 615 (620)
T COG1506 551 KTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVFPDEGHGFSR--------------PENRVKVLKEILDWFKR 615 (620)
T ss_pred CCCEEEEeecCCccCChHHHHHHHHHHHHcCceEEEEEeCCCCcCCCC--------------chhHHHHHHHHHHHHHH
Confidence 46899999976532 234467888898889887666552 3454332 12234455666666654
No 391
>KOG4530 consensus Predicted flavoprotein [General function prediction only]
Probab=20.47 E-value=3e+02 Score=20.47 Aligned_cols=22 Identities=18% Similarity=0.385 Sum_probs=14.7
Q ss_pred chHHHHHHHHHHC-CCEEEeccC
Q 026476 54 PNLRKLADKVAAA-GFYVAVPDF 75 (238)
Q Consensus 54 ~~~~~~a~~l~~~-G~~v~~~d~ 75 (238)
...+.+.+.++.. ++.-+.|.|
T Consensus 75 ~~t~aw~~ki~~aD~ivFvtPqY 97 (199)
T KOG4530|consen 75 PVTEAWRQKILEADSIVFVTPQY 97 (199)
T ss_pred HHHHHHHHHHhhcceEEEecccc
Confidence 3446677777776 666667776
No 392
>cd08179 NADPH_BDH NADPH-dependent butanol dehydrogenase involved in the butanol and ethanol formation pathway in bacteria. NADPH-dependent butanol dehydrogenase (BDH) is involved in the butanol and ethanol formation pathway of some bacteria. The fermentation process is characterized by an acid producing growth phase, followed by a solvent producing phase. The latter phase is associated with the induction of solventogenic enzymes such as butanol dehydrogenase. The activity of the enzymes require NADPH as cofactor, as well as divalent ions zinc or iron. This family is a member of the iron-containing alcohol dehydrogenase superfamily. Protein structure has a dehydroquinate synthase-like fold.
Probab=20.36 E-value=4.7e+02 Score=22.12 Aligned_cols=64 Identities=19% Similarity=0.101 Sum_probs=38.4
Q ss_pred eEEEEeccCCC-CCchHHHHHHHHHHCCCEEEeccCCCCCccCCCCCcchHhhHhhcCCCcchhcHHHHHHHHHhcCCce
Q 026476 41 AVLLISDVYGY-EAPNLRKLADKVAAAGFYVAVPDFFHGDPYVADGGKPLQEWIKDHGVDKGFEEAKPVIQALKSKGITA 119 (238)
Q Consensus 41 ~vl~~hg~~g~-~~~~~~~~a~~l~~~G~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~ 119 (238)
.++++.+.... .......+.+.|.+.|+.+..++..... -..+.+.++++.+++.+.+-
T Consensus 25 r~livt~~~~~~~~g~~~~v~~~L~~~g~~~~~~~~v~~~--------------------p~~~~v~~~~~~~~~~~~D~ 84 (375)
T cd08179 25 KAFIVTGGGSMKKFGFLDKVEAYLKEAGIEVEVFEGVEPD--------------------PSVETVLKGAEAMREFEPDW 84 (375)
T ss_pred eEEEEeCchHHHhCChHHHHHHHHHHcCCeEEEeCCCCCC--------------------cCHHHHHHHHHHHHhcCCCE
Confidence 45666653321 1245567888888889988776631111 12356778888888776665
Q ss_pred EEEEE
Q 026476 120 IGAAG 124 (238)
Q Consensus 120 i~l~G 124 (238)
|..+|
T Consensus 85 IIavG 89 (375)
T cd08179 85 IIALG 89 (375)
T ss_pred EEEeC
Confidence 44443
No 393
>COG1564 THI80 Thiamine pyrophosphokinase [Coenzyme metabolism]
Probab=20.34 E-value=1.3e+02 Score=23.37 Aligned_cols=37 Identities=16% Similarity=0.258 Sum_probs=30.7
Q ss_pred CCcchhcHHHHHHHHHhcCCceEEEEEeeccHHHHHHc
Q 026476 98 VDKGFEEAKPVIQALKSKGITAIGAAGFCWGAKVVVQL 135 (238)
Q Consensus 98 ~~~~~~d~~~~~~~l~~~~~~~i~l~G~S~GG~~a~~~ 135 (238)
.++...|..-+++++.+++...|.++| -+||.+=-.+
T Consensus 73 ~eKd~TD~elAl~~a~e~g~d~i~i~G-a~GGR~DH~l 109 (212)
T COG1564 73 AEKDSTDLELALDEALERGADEIVILG-ALGGRLDHAL 109 (212)
T ss_pred hhhccchHHHHHHHHHHcCCCEEEEEe-cCCChHHHHH
Confidence 377888999999999999888999999 7888765543
No 394
>TIGR00227 ribD_Cterm riboflavin-specific deaminase C-terminal domain. Eubacterial riboflavin-specific deaminases have a zinc-binding domain recognized by the dCMP_cyt_deam model toward the N-terminus and this domain toward the C-terminus. Yeast HTP reductase, a riboflavin-biosynthetic enzyme, and several archaeal proteins believed related to riboflavin biosynthesis consist only of this domain and lack the dCMP_cyt_deam domain.
Probab=20.16 E-value=3e+02 Score=20.97 Aligned_cols=42 Identities=19% Similarity=0.356 Sum_probs=31.3
Q ss_pred cHHHHHHHHHhcCCceEEEEEeeccHHHHHHccCCcCceEEEEec
Q 026476 104 EAKPVIQALKSKGITAIGAAGFCWGAKVVVQLGKREFIQAAVLLH 148 (238)
Q Consensus 104 d~~~~~~~l~~~~~~~i~l~G~S~GG~~a~~~a~~~~i~a~i~~~ 148 (238)
|+.++++.+++++..+|.+.| |+.++..+.....++-.++..
T Consensus 129 dl~~~l~~L~~~g~~~llveG---G~~L~~~fl~~~LvDel~l~i 170 (216)
T TIGR00227 129 DLKKLMEILYEEGINSVMVEG---GGTLNGSLLKEGLVDELIVYI 170 (216)
T ss_pred CHHHHHHHHHHcCCCEEEEee---CHHHHHHHHHCCCCCEEEEEE
Confidence 788899999888888888865 677777776666676665543
No 395
>KOG0744 consensus AAA+-type ATPase [Posttranslational modification, protein turnover, chaperones]
Probab=20.11 E-value=1.7e+02 Score=24.73 Aligned_cols=32 Identities=16% Similarity=0.185 Sum_probs=20.4
Q ss_pred eeEEEEeccCCCCCchHHHHHHHHHHCCCEEEeccC
Q 026476 40 LAVLLISDVYGYEAPNLRKLADKVAAAGFYVAVPDF 75 (238)
Q Consensus 40 ~~vl~~hg~~g~~~~~~~~~a~~l~~~G~~v~~~d~ 75 (238)
.-+|++||-.|... ..++..|+++ ..+=+.|-
T Consensus 177 NRliLlhGPPGTGK---TSLCKaLaQk-LSIR~~~~ 208 (423)
T KOG0744|consen 177 NRLILLHGPPGTGK---TSLCKALAQK-LSIRTNDR 208 (423)
T ss_pred eeEEEEeCCCCCCh---hHHHHHHHHh-heeeecCc
Confidence 34899999888642 4566777665 33444454
No 396
>PF06564 YhjQ: YhjQ protein; InterPro: IPR017746 The YhjQ protein is encoded immediately upstream of bacterial cellulose synthase (bcs) genes in a broad range of bacteria, including both copies of the bcs locus in Klebsiella pneumoniae, and in several species is clearly part of the bcs operon. It is identified as a probable component of the bacterial cellulose metabolic process not only by gene location, but also by partial phylogenetic profiling, or Haft-Selengut algorithm [], based on a bacterial cellulose biosynthesis genome property profile. Cellulose plays an important role in biofilm formation and structural integrity in some bacteria. Mutants in yhjQ in Escherichia coli, show altered morphology an growth, but the function of YhjQ has not yet been determined.
Probab=20.04 E-value=1.4e+02 Score=23.73 Aligned_cols=28 Identities=25% Similarity=0.080 Sum_probs=21.8
Q ss_pred ccCCCCCchHHHHHHHHHHCCCEEEeccC
Q 026476 47 DVYGYEAPNLRKLADKVAAAGFYVAVPDF 75 (238)
Q Consensus 47 g~~g~~~~~~~~~a~~l~~~G~~v~~~d~ 75 (238)
|+.|.. .-...+|..|++.|..|+++|+
T Consensus 11 GGvG~T-TltAnLA~aL~~~G~~VlaID~ 38 (243)
T PF06564_consen 11 GGVGKT-TLTANLAWALARLGESVLAIDL 38 (243)
T ss_pred CCCCHH-HHHHHHHHHHHHCCCcEEEEeC
Confidence 344442 4456899999999999999997
Done!