BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026478
(238 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q84WW5|VAP13_ARATH Vesicle-associated protein 1-3 OS=Arabidopsis thaliana GN=PVA13
PE=2 SV=1
Length = 239
Score = 323 bits (829), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 166/236 (70%), Positives = 196/236 (83%), Gaps = 1/236 (0%)
Query: 1 MSTGDLVNIQPSELKFPFELKKQSSCSMQLTNKTD-KFVAFKVKTTNPKKYCVRPNTGII 59
M+TGDLVNI P+ELKFPFELKKQSSCSMQLTNKT + VAFKVKTTNP+KYCVRPNTG++
Sbjct: 1 MTTGDLVNIHPTELKFPFELKKQSSCSMQLTNKTTTQCVAFKVKTTNPRKYCVRPNTGVV 60
Query: 60 LPRTSCAVTVTMQAQKEAPPDFQCKDKFLLLSVVAPDGATAKDIGPDMFTKEDGKVVEEF 119
LP SC VTVTMQAQKEAP D QCKDKFL+ +VV DG T+K++ +MF KE G+V+E+F
Sbjct: 61 LPGDSCNVTVTMQAQKEAPLDMQCKDKFLVQTVVVSDGTTSKEVLAEMFNKEAGRVIEDF 120
Query: 120 KLRVVYIPANPPSPVPEGSEEGSSPRAFSQENGNHHNSSFDDVSKSLEVPKEKSSEAWSM 179
KLRVVYIPANPPSPVPEGSEEG+SP A + + S FDDVS++ E EKSSEAWSM
Sbjct: 121 KLRVVYIPANPPSPVPEGSEEGNSPMASLNDIASQSASLFDDVSRTFEETSEKSSEAWSM 180
Query: 180 ISKLTEEKTSAMQQNQKLRQELEFVRKEISKSRAGGFSTVFVLLIGLLGILVGYLV 235
ISKLTEEKTSA QQ+QKLR ELE +RKE SK ++GG S + +LL+GLLG ++GYL+
Sbjct: 181 ISKLTEEKTSATQQSQKLRLELEMLRKETSKKQSGGHSLLLMLLVGLLGCVIGYLL 236
>sp|Q8VZ95|VAP11_ARATH Vesicle-associated protein 1-1 OS=Arabidopsis thaliana GN=PVA11
PE=1 SV=1
Length = 256
Score = 263 bits (671), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 141/240 (58%), Positives = 186/240 (77%), Gaps = 2/240 (0%)
Query: 1 MSTGDLVNIQPSELKFPFELKKQSSCSMQLTNKTDKFVAFKVKTTNPKKYCVRPNTGIIL 60
MS +L+ ++P +L+FPFELKKQ SCS+ LTNKTD VAFKVKTTNPKKYCVRPNTG++L
Sbjct: 17 MSNSELLTVEPLDLQFPFELKKQISCSLYLTNKTDNNVAFKVKTTNPKKYCVRPNTGVVL 76
Query: 61 PRTSCAVTVTMQAQKEAPPDFQCKDKFLLLSVVAPDGATAKDIGPDMFTKEDGKVVEEFK 120
PR++C V VTMQAQKEAP D QCKDKFLL V+A G TAK++ P+MF+KE G VEE K
Sbjct: 77 PRSTCEVLVTMQAQKEAPSDMQCKDKFLLQGVIASPGVTAKEVTPEMFSKEAGHRVEETK 136
Query: 121 LRVVYI-PANPPSPVPEGSEEGSSPRAFSQENGNHHNSSFDD-VSKSLEVPKEKSSEAWS 178
LRV Y+ P PPSPV EGSEEGSSPRA +NG+ SF+ + + +E +SEA +
Sbjct: 137 LRVTYVAPPRPPSPVHEGSEEGSSPRASVSDNGHGSEFSFERFIVDNKAGHQENTSEARA 196
Query: 179 MISKLTEEKTSAMQQNQKLRQELEFVRKEISKSRAGGFSTVFVLLIGLLGILVGYLVKTT 238
+I+KLTEEK SA+Q N +L++EL+ +R+E KS++GG ++VLL+GL+G+++GY++K T
Sbjct: 197 LITKLTEEKQSAIQLNNRLQRELDQLRRESKKSQSGGIPFMYVLLVGLIGLILGYIMKRT 256
>sp|Q9SHC8|VAP12_ARATH Vesicle-associated protein 1-2 OS=Arabidopsis thaliana GN=PVA12
PE=1 SV=1
Length = 239
Score = 254 bits (648), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 139/238 (58%), Positives = 181/238 (76%), Gaps = 2/238 (0%)
Query: 3 TGDLVNIQPSELKFPFELKKQSSCSMQLTNKTDKFVAFKVKTTNPKKYCVRPNTGIILPR 62
+ +L+ I P +L+FPFELKKQ SCS+ L NKTD +VAFKVKTTNPKKYCVRPNTG++ PR
Sbjct: 2 SNELLTIDPVDLQFPFELKKQISCSLYLGNKTDNYVAFKVKTTNPKKYCVRPNTGVVHPR 61
Query: 63 TSCAVTVTMQAQKEAPPDFQCKDKFLLLSVVAPDGATAKDIGPDMFTKEDGKVVEEFKLR 122
+S V VTMQAQKEAP D QCKDKFLL VVA GAT KD+ +MF+KE G VEE KLR
Sbjct: 62 SSSEVLVTMQAQKEAPADLQCKDKFLLQCVVASPGATPKDVTHEMFSKEAGHRVEETKLR 121
Query: 123 VVYI-PANPPSPVPEGSEEGSSPRAFSQENGNHHN-SSFDDVSKSLEVPKEKSSEAWSMI 180
VVY+ P PPSPV EGSEEGSSPRA +NGN + ++ S ++ SSEA +++
Sbjct: 122 VVYVAPPRPPSPVREGSEEGSSPRASVSDNGNASDFTAAPRFSADRVDAQDNSSEARALV 181
Query: 181 SKLTEEKTSAMQQNQKLRQELEFVRKEISKSRAGGFSTVFVLLIGLLGILVGYLVKTT 238
+KLTEEK SA+Q N +L+QEL+ +R+E +S++GG ++VLL+GL+G+++GY++K T
Sbjct: 182 TKLTEEKNSAVQLNNRLQQELDQLRRESKRSKSGGIPFMYVLLVGLIGLILGYIMKRT 239
>sp|Q9LVU1|VAP21_ARATH Vesicle-associated protein 2-1 OS=Arabidopsis thaliana GN=PVA21
PE=2 SV=1
Length = 220
Score = 195 bits (496), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 104/234 (44%), Positives = 147/234 (62%), Gaps = 28/234 (11%)
Query: 6 LVNIQPSELKFPFELKKQSSCSMQLTNKTDKFVAFKVKTTNPKKYCVRPNTGIILPRTSC 65
L++IQP ELKF FEL+KQS C +++ NKT+ +VAFKVKTT+PKKY VRPNTG+I P SC
Sbjct: 9 LISIQPDELKFLFELEKQSYCDLKVANKTENYVAFKVKTTSPKKYFVRPNTGVIQPWDSC 68
Query: 66 AVTVTMQAQKEAPPDFQCKDKFLLLSVVAPDGATAKDIGPDMFTKEDGKVVEEFKLRVVY 125
+ VT+QAQ+E PPD QCKDKFLL S + P ++ D FTK+ GK + E KL+V Y
Sbjct: 69 IIRVTLQAQREYPPDMQCKDKFLLQSTIVPPHTDVDELPQDTFTKDSGKTLTECKLKVSY 128
Query: 126 IPANPPSPVPEGSEEGSSPRAFSQENGNHHNSSFDDVSKSLEVPKEKSSEAWSMISKLTE 185
I PS SE G++ NG+ +SSE S I +L E
Sbjct: 129 I---TPSTTQRSSESGAT-------NGDG-----------------QSSETISTIQRLKE 161
Query: 186 EKTSAMQQNQKLRQELEFVRKEISKSRAG-GFSTVFVLLIGLLGILVGYLVKTT 238
E+ +A++Q Q+L+ ELE VR+ ++ +G G S ++GL+G+++G+++K T
Sbjct: 162 ERDAAVKQTQQLQHELETVRRRRNQRNSGNGLSLKLAAMVGLIGLIIGFILKLT 215
>sp|Q9SYC9|VAP14_ARATH Vesicle-associated protein 1-4 OS=Arabidopsis thaliana GN=PVA14
PE=2 SV=1
Length = 571
Score = 183 bits (464), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 92/168 (54%), Positives = 119/168 (70%), Gaps = 2/168 (1%)
Query: 3 TGDLVNIQPSELKFPFELKKQSSCSMQLTNKTDKFVAFKVKTTNPKKYCVRPNTGIILPR 62
+ +L+ I P +++FP EL K+ SCS+ LTNKT+ +VAFK KTTN KKY VRPN G++LPR
Sbjct: 173 SDELLIIDPVDVQFPIELNKKVSCSLNLTNKTENYVAFKAKTTNAKKYYVRPNVGVVLPR 232
Query: 63 TSCAVTVTMQAQKEAPPDFQCKDKFLLLSVVAPDGATAKDIGPDMFTKEDGKVVEEFKLR 122
+SC V V MQA KEAP D QC+DK L V TAKD+ +MF+KE G EE +L+
Sbjct: 233 SSCEVLVIMQALKEAPADMQCRDKLLFQCKVVEPETTAKDVTSEMFSKEAGHPAEETRLK 292
Query: 123 VVYI-PANPPSPVPEGSEEGSSPRAFSQENGNHHNSSFDDVSKSLEVP 169
V+Y+ P PPSPV EG+EEGSSPRA +NGN + +F D+ +SL VP
Sbjct: 293 VMYVTPPQPPSPVQEGTEEGSSPRASVSDNGN-ASEAFVDMLRSLLVP 339
Score = 165 bits (418), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 80/154 (51%), Positives = 103/154 (66%), Gaps = 1/154 (0%)
Query: 1 MSTGDLVNIQPSELKFPFELKKQSSCSMQLTNKTDKFVAFKVKTTNPKKYCVRPNTGIIL 60
MST +L+ +++FP EL KQ SCS+ LTNKTD +VAFK +TT PK YCV+P+ G++L
Sbjct: 1 MSTDELLTFDHVDIRFPIELNKQGSCSLNLTNKTDNYVAFKAQTTKPKMYCVKPSVGVVL 60
Query: 61 PRTSCAVTVTMQAQKEAPPDFQCKDKFLLLSVVAPDGATAKDIGPDMFTKEDGKVVEEFK 120
PR+SC V V MQA KEAP D QCKDK L V G K++ +MF+KE G VEE
Sbjct: 61 PRSSCEVLVVMQALKEAPADRQCKDKLLFQCKVVEPGTMDKEVTSEMFSKEAGHRVEETI 120
Query: 121 LRVVYI-PANPPSPVPEGSEEGSSPRAFSQENGN 153
+++Y+ P P SPV EG E+GSSP A + GN
Sbjct: 121 FKIIYVAPPQPQSPVQEGLEDGSSPSASVSDKGN 154
>sp|O82213|VAP31_ARATH Vesicle-associated protein 3-1 OS=Arabidopsis thaliana GN=PVA31
PE=3 SV=1
Length = 149
Score = 164 bits (414), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 78/126 (61%), Positives = 96/126 (76%)
Query: 1 MSTGDLVNIQPSELKFPFELKKQSSCSMQLTNKTDKFVAFKVKTTNPKKYCVRPNTGIIL 60
MS +L+ I+P L+FPFELKKQ SCS+ LTNKTD VAFKVKTTN YCVRPN G+IL
Sbjct: 1 MSNNELLEIEPMYLQFPFELKKQMSCSLYLTNKTDNNVAFKVKTTNRNNYCVRPNYGLIL 60
Query: 61 PRTSCAVTVTMQAQKEAPPDFQCKDKFLLLSVVAPDGATAKDIGPDMFTKEDGKVVEEFK 120
P+++C V VTMQAQKE P D Q +KF++ SV+A G TAK++ +MF+KE G VVEE K
Sbjct: 61 PKSTCKVLVTMQAQKEVPSDMQSFEKFMIQSVLASPGVTAKEVTREMFSKESGHVVEETK 120
Query: 121 LRVVYI 126
LRV Y+
Sbjct: 121 LRVTYV 126
>sp|B9DHD7|VAP22_ARATH Vesicle-associated protein 2-2 OS=Arabidopsis thaliana GN=PVA22
PE=1 SV=1
Length = 386
Score = 150 bits (379), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 74/133 (55%), Positives = 93/133 (69%), Gaps = 3/133 (2%)
Query: 6 LVNIQPSELKFPFELKKQSSCSMQLTNKTDKFVAFKVKTTNPKKYCVRPNTGIILPRTSC 65
L++IQP L+F +LKKQ+SC +QLTN T +VAFKVKTT+PKKYCVRPN G++ P+++C
Sbjct: 5 LLDIQPRTLQFAVDLKKQTSCVVQLTNTTHHYVAFKVKTTSPKKYCVRPNVGVVAPKSTC 64
Query: 66 AVTVTMQAQKEAPPDFQCKDKFLLLSVVAPDGATAKDIGPDMFTKEDGKVVEEFKLRVVY 125
TV MQA KE PPD CKDKFL+ S T +DI MF+K +GK +EE KLRV
Sbjct: 65 EFTVIMQAFKEPPPDMVCKDKFLIQSTAVSAETTDEDITASMFSKAEGKHIEENKLRVTL 124
Query: 126 IPANPPSPVPEGS 138
+ PPS PE S
Sbjct: 125 V---PPSDSPELS 134
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 172 KSSEAWSMISKLTEEKTSAMQQNQKLRQELEFVR-KEISKSRAGGFSTVFVLLIGLLGIL 230
K +A S ISKL EE++ + Q Q L+ EL +R K+I K GF ++V ++ + +
Sbjct: 320 KLKQADSTISKLMEERSISSQHRQSLQHELAELRTKKIVKEVHNGFPLLYVCVVAFIAYV 379
Query: 231 VGYLVKT 237
+G+ ++T
Sbjct: 380 IGHFLRT 386
>sp|Q16943|VP33_APLCA Vesicle-associated membrane protein/synaptobrevin-binding protein
OS=Aplysia californica PE=2 SV=1
Length = 260
Score = 82.0 bits (201), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 98/203 (48%), Gaps = 27/203 (13%)
Query: 13 ELKFPFELKKQSSCSMQLTNKTDKFVAFKVKTTNPKKYCVRPNTGIILPRTSCAVTVTMQ 72
EL+F + ++L+N TD+ + FKVKTT PK+YCVRPN+GI+ P+TS AV V +Q
Sbjct: 15 ELRFKGPFTDVVTADLKLSNPTDRRICFKVKTTAPKRYCVRPNSGILEPKTSIAVAVMLQ 74
Query: 73 AQKEAPPDFQCKDKFLLLSVVAPDGATA------KDIGPDMFTKEDGKVVEEFKLRVVYI 126
P+ + K KF++ S+ APD KD P+ + KLR V+
Sbjct: 75 PFNYD-PNEKNKHKFMVQSMYAPDHVVESQELLWKDAPPESLM--------DTKLRCVF- 124
Query: 127 PANPPSPVPEGSEEGSSPRAFSQENGNHHNSSFDDVSKSLEVPKEKSSEAWSMISKLTEE 186
+P+GS + + A + H S +LE P S + + K
Sbjct: 125 ------EMPDGSHQAPASDASRATDAGAHFS-----ESALEDPTVASRKTETQSPKRVGA 173
Query: 187 KTSAMQQNQKLRQELEFVRKEIS 209
SA + +KL+ EL+ + EI+
Sbjct: 174 VGSAGEDVKKLQHELKKAQSEIT 196
>sp|O60119|YH75_SCHPO Vesicle-associated membrane protein-associated protein C16G5.05c
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPBC16G5.05c PE=1 SV=1
Length = 383
Score = 82.0 bits (201), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 63/108 (58%), Gaps = 4/108 (3%)
Query: 28 MQLTNKTDKFVAFKVKTTNPKKYCVRPNTGIILPRTSCAVTVTMQAQKEAP-PDFQCKDK 86
+ + N + V FKVKTT PK YCVRPN+G I P+++ V V +QA KE P PDF+C+DK
Sbjct: 23 ISVHNPNPEPVIFKVKTTAPKHYCVRPNSGKIEPKSTVNVQVLLQAMKEEPAPDFKCRDK 82
Query: 87 FLLLSVVAPDGATAKDIGPDMFTKE---DGKVVEEFKLRVVYIPANPP 131
FL+ S+ D T+ F E G+ + + K+R VY PP
Sbjct: 83 FLIQSMAIGDADTSNVENYHEFWTEMEKQGRSIFDRKIRCVYSTKQPP 130
>sp|P40075|SCS2_YEAST Vesicle-associated membrane protein-associated protein SCS2
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=SCS2 PE=1 SV=3
Length = 244
Score = 76.6 bits (187), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 71/124 (57%), Gaps = 5/124 (4%)
Query: 7 VNIQPSELKFPFELKKQSSCSMQLTNKTDKFVAFKVKTTNPKKYCVRPNTGIILPRTSCA 66
V I P L + L +QS+ ++N +D+ +AFKVKTT PK YCVRPN ++ P +
Sbjct: 4 VEISPDVLVYKSPLTEQSTEYASISNNSDQTIAFKVKTTAPKFYCVRPNAAVVAPGETIQ 63
Query: 67 VTVTMQAQKEAP-PDFQCKDKFLLLSVVAP---DGATAKDIGPDMFTKEDGKVVEEFKLR 122
V V E P DF+C+DKFL++++ +P +G D+ D+ + + + + K++
Sbjct: 64 VQVIFLGLTEEPAADFKCRDKFLVITLPSPYDLNGKAVADVWSDLEAEFKQQAISK-KIK 122
Query: 123 VVYI 126
V Y+
Sbjct: 123 VKYL 126
>sp|Q5R601|VAPA_PONAB Vesicle-associated membrane protein-associated protein A OS=Pongo
abelii GN=VAPA PE=2 SV=2
Length = 249
Score = 76.3 bits (186), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 116/250 (46%), Gaps = 40/250 (16%)
Query: 6 LVNIQPSELKFPFELKKQSSCSMQLTNKTDKFVAFKVKTTNPKKYCVRPNTGIILPRTSC 65
LV P++LKF + +++L N +D+ V FKVKTT P++YCVRPN+GII P ++
Sbjct: 15 LVLDPPTDLKFKGPFTDVVTTNLKLRNPSDRKVCFKVKTTAPRRYCVRPNSGIIDPGSTV 74
Query: 66 AVTVTMQAQKEAPPDFQCKDKFLLLSVVAPDG-----ATAKDIGPDMFTKEDGKVVEEFK 120
V+V +Q + P+ + K KF++ ++ AP A K+ PD + K
Sbjct: 75 TVSVMLQPF-DYDPNEKSKHKFMVQTIFAPPNTSDMEAVWKEAKPDELM--------DSK 125
Query: 121 LRVVYIPANPPSPVPEGSEEGSSPRAFSQENG---NHHNSSFDDVS--KSLEVPKEKSSE 175
LR V+ N + + + P S+++G H+ S +D K +E K E
Sbjct: 126 LRCVFEMPNENDKLNDMEPSKAVPLNASKQDGPMPKPHSVSLNDTETRKLMEECKRLQGE 185
Query: 176 AWSMISKLTEEKTSAMQQNQKLRQELEFVRKEISKSRAGGFSTVFV----------LLIG 225
+ KL+EE N+ LR E +RK + G ST LL+
Sbjct: 186 ----MMKLSEE-------NRHLRDEGLRLRKVAHSDKPGSTSTASFRDNVTSPLPSLLVV 234
Query: 226 LLGILVGYLV 235
+ I +G+ +
Sbjct: 235 IAAIFIGFFL 244
>sp|Q9P0L0|VAPA_HUMAN Vesicle-associated membrane protein-associated protein A OS=Homo
sapiens GN=VAPA PE=1 SV=3
Length = 249
Score = 76.3 bits (186), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 116/250 (46%), Gaps = 40/250 (16%)
Query: 6 LVNIQPSELKFPFELKKQSSCSMQLTNKTDKFVAFKVKTTNPKKYCVRPNTGIILPRTSC 65
LV P++LKF + +++L N +D+ V FKVKTT P++YCVRPN+GII P ++
Sbjct: 15 LVLDPPTDLKFKGPFTDVVTTNLKLRNPSDRKVCFKVKTTAPRRYCVRPNSGIIDPGSTV 74
Query: 66 AVTVTMQAQKEAPPDFQCKDKFLLLSVVAPDG-----ATAKDIGPDMFTKEDGKVVEEFK 120
V+V +Q + P+ + K KF++ ++ AP A K+ PD + K
Sbjct: 75 TVSVMLQPF-DYDPNEKSKHKFMVQTIFAPPNTSDMEAVWKEAKPDELM--------DSK 125
Query: 121 LRVVYIPANPPSPVPEGSEEGSSPRAFSQENG---NHHNSSFDDVS--KSLEVPKEKSSE 175
LR V+ N + + + P S+++G H+ S +D K +E K E
Sbjct: 126 LRCVFEMPNENDKLNDMEPSKAVPLNASKQDGPMPKPHSVSLNDTETRKLMEECKRLQGE 185
Query: 176 AWSMISKLTEEKTSAMQQNQKLRQELEFVRKEISKSRAGGFSTVFV----------LLIG 225
+ KL+EE N+ LR E +RK + G ST LL+
Sbjct: 186 ----MMKLSEE-------NRHLRDEGLRLRKVAHSDKPGSTSTASFRDNVTSPLPSLLVV 234
Query: 226 LLGILVGYLV 235
+ I +G+ +
Sbjct: 235 IAAIFIGFFL 244
>sp|Q9WV55|VAPA_MOUSE Vesicle-associated membrane protein-associated protein A OS=Mus
musculus GN=Vapa PE=1 SV=2
Length = 249
Score = 75.1 bits (183), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 115/250 (46%), Gaps = 40/250 (16%)
Query: 6 LVNIQPSELKFPFELKKQSSCSMQLTNKTDKFVAFKVKTTNPKKYCVRPNTGIILPRTSC 65
LV PS+LKF + +++L N +D+ V FKVKTT P++YCVRPN+GII P +
Sbjct: 15 LVLDPPSDLKFKGPFTDVVTTNLKLQNPSDRKVCFKVKTTAPRRYCVRPNSGIIDPGSIV 74
Query: 66 AVTVTMQAQKEAPPDFQCKDKFLLLSVVAPDG-----ATAKDIGPDMFTKEDGKVVEEFK 120
V+V +Q + P+ + K KF++ ++ AP A K+ PD + K
Sbjct: 75 TVSVMLQPF-DYDPNEKSKHKFMVQTIFAPPNISDMEAVWKEAKPDELM--------DSK 125
Query: 121 LRVVYIPANPPSPVPEGSEEGSSPRAFSQENG---NHHNSSFDDVS--KSLEVPKEKSSE 175
LR V+ N + + + P S+++G H+ S +D K +E K E
Sbjct: 126 LRCVFEMPNENDKLNDMEPSKAVPLNASKQDGPLPKPHSVSLNDTETRKLMEECKRLQGE 185
Query: 176 AWSMISKLTEEKTSAMQQNQKLRQELEFVRKEISKSRAGGFSTVFV----------LLIG 225
+ KL+EE N+ LR E +RK + G S V LL+
Sbjct: 186 ----MMKLSEE-------NRHLRDEGLRLRKVAHSDKPGSTSAVSFRDNVTSPLPSLLVV 234
Query: 226 LLGILVGYLV 235
+ I +G+ +
Sbjct: 235 IAAIFIGFFL 244
>sp|Q9Z270|VAPA_RAT Vesicle-associated membrane protein-associated protein A OS=Rattus
norvegicus GN=Vapa PE=1 SV=3
Length = 249
Score = 74.3 bits (181), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 115/250 (46%), Gaps = 40/250 (16%)
Query: 6 LVNIQPSELKFPFELKKQSSCSMQLTNKTDKFVAFKVKTTNPKKYCVRPNTGIILPRTSC 65
LV PS+LKF + +++L N +D+ V FKVKTT P++YCVRPN+G+I P +
Sbjct: 15 LVLDPPSDLKFKGPFTDVVTTNLKLQNPSDRKVCFKVKTTAPRRYCVRPNSGVIDPGSIV 74
Query: 66 AVTVTMQAQKEAPPDFQCKDKFLLLSVVAPDG-----ATAKDIGPDMFTKEDGKVVEEFK 120
V+V +Q + P+ + K KF++ ++ AP A K+ PD + K
Sbjct: 75 TVSVMLQPF-DYDPNEKSKHKFMVQTIFAPPNISDMEAVWKEAKPDELM--------DSK 125
Query: 121 LRVVYIPANPPSPVPEGSEEGSSPRAFSQENG---NHHNSSFDDVS--KSLEVPKEKSSE 175
LR V+ N + + + P S+++G H+ S +D K +E K E
Sbjct: 126 LRCVFEMPNENDKLNDMEPSKAVPLNASKQDGPLPKPHSVSLNDTETRKLMEECKRLQGE 185
Query: 176 AWSMISKLTEEKTSAMQQNQKLRQELEFVRKEISKSRAGGFSTVFV----------LLIG 225
+ KL+EE N+ LR E +RK + G S V LL+
Sbjct: 186 ----MMKLSEE-------NRHLRDEGLRLRKVAHSDKPGSTSAVSFRDNVTSPLPSLLVV 234
Query: 226 LLGILVGYLV 235
+ I +G+ +
Sbjct: 235 IAAIFIGFFL 244
>sp|Q10484|YDFC_SCHPO Uncharacterized protein C17C9.12 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC17C9.12 PE=1 SV=2
Length = 319
Score = 74.3 bits (181), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 61/115 (53%), Gaps = 2/115 (1%)
Query: 12 SELKFPFELKKQSSCSMQLTNKTDKFVAFKVKTTNPKKYCVRPNTGIILPRTSCAVTVTM 71
S + FP L + C ++L N + FKVKTT PK+YCVRPN G I ++ +V V +
Sbjct: 7 STIVFPRPLTRLVKCDLELRNTAPYPIGFKVKTTAPKQYCVRPNGGRIEANSAVSVEVIL 66
Query: 72 QAQKEAP-PDFQCKDKFLLLSVVAPDGATAKDIGPDMFTKEDGKVVEEFKLRVVY 125
Q P P +C+DKFL+ S DI D++T+ + E K+R VY
Sbjct: 67 QPLDHEPAPGTKCRDKFLVQSTELKPELQGMDIA-DIWTQVSKANISERKIRCVY 120
>sp|Q0VCY1|VAPA_BOVIN Vesicle-associated membrane protein-associated protein A OS=Bos
taurus GN=VAPA PE=2 SV=1
Length = 249
Score = 72.8 bits (177), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 113/248 (45%), Gaps = 36/248 (14%)
Query: 6 LVNIQPSELKFPFELKKQSSCSMQLTNKTDKFVAFKVKTTNPKKYCVRPNTGIILPRTSC 65
LV P++LKF + +++L N +D+ V FKVKTT P++YCVRPN+GII P +
Sbjct: 15 LVLDPPTDLKFKGPFTDVVTTNLKLRNPSDRKVCFKVKTTAPRRYCVRPNSGIIDPGLTV 74
Query: 66 AVTVTMQAQKEAPPDFQCKDKFLLLSVVAPDG-----ATAKDIGPDMFTKEDGKVVEEFK 120
V+V +Q + P+ + K KF++ ++ AP A K+ PD + K
Sbjct: 75 TVSVMLQPF-DYDPNEKSKHKFMVQTIFAPPNISDMEAVWKEAKPDELM--------DSK 125
Query: 121 LRVVYIPANPPSPVPEGSEEGSSPRAFSQENG---NHHNSSFDDVSKSLEVPKEKSSEAW 177
LR V+ N + + + P ++++G H+ S D V + K +
Sbjct: 126 LRCVFEMPNENDKLNDMEPSKAVPLNAAKQDGPVPKPHSVSLSDTETRKLVEECKRLQGE 185
Query: 178 SMISKLTEEKTSAMQQNQKLRQELEFVRKEISKSRAGGFSTVFV----------LLIGLL 227
M KL+EE N+ LR E +RK + G S V LL+ +
Sbjct: 186 MM--KLSEE-------NRLLRDEGLRLRKVAHSEKPGSTSAVSFRENVTSPLPSLLVVIA 236
Query: 228 GILVGYLV 235
I +G+ +
Sbjct: 237 AIFIGFFL 244
>sp|A2VDZ9|VAPB_BOVIN Vesicle-associated membrane protein-associated protein B OS=Bos
taurus GN=VAPB PE=2 SV=1
Length = 243
Score = 69.3 bits (168), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 122/248 (49%), Gaps = 32/248 (12%)
Query: 6 LVNIQP-SELKFPFELKKQSSCSMQLTNKTDKFVAFKVKTTNPKKYCVRPNTGIILPRTS 64
+++++P ELKF + +++L N TD+ V FKVKTT P++YCVRPN+GII S
Sbjct: 7 VLSLEPQHELKFRGPFTDVVTTNLKLGNPTDRNVCFKVKTTAPRRYCVRPNSGIIDAGAS 66
Query: 65 CAVTVTMQAQKEAPPDFQCKDKFLLLSVVAPDGATAKDIGPDMFTKEDGKVVEEFKLRVV 124
V+V +Q + P+ + K KF++ S+ AP + + ED + + KLR V
Sbjct: 67 INVSVMLQPF-DYDPNEKSKHKFMVQSMFAPTDTSDMEAVWKEAKPED---LMDSKLRCV 122
Query: 125 Y-IPANPPSP--------VPEGSEEGSSPRAFSQENGNHHNSSFDD--VSKSLEVPKEKS 173
+ +PA P +P + + +P +SS DD V K +E K
Sbjct: 123 FELPAENDKPHDVEINKIIPTTASKTETPTV-----SKALSSSLDDTEVKKVMEECKRLQ 177
Query: 174 SEAWSMISKLTEEKTSAMQQNQ-KLRQELEFVRKEISKSRAG---GFST---VFVLLIGL 226
SE + +L EE +++ ++R+ + + + AG G ST V+L +
Sbjct: 178 SE----VQRLREENKQFKEEDGLRMRKTAQSNSPAPASAMAGKEEGLSTRLLALVVLFFI 233
Query: 227 LGILVGYL 234
+G+++G +
Sbjct: 234 VGVIIGKI 241
>sp|A5GFS8|VAPB_PIG Vesicle-associated membrane protein-associated protein B OS=Sus
scrofa GN=VAPB PE=3 SV=1
Length = 243
Score = 67.4 bits (163), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 75/250 (30%), Positives = 121/250 (48%), Gaps = 36/250 (14%)
Query: 6 LVNIQP-SELKFPFELKKQSSCSMQLTNKTDKFVAFKVKTTNPKKYCVRPNTGIILPRTS 64
+++++P ELKF + +++L N TD+ V FKVKTT P++YCVRPN+GII S
Sbjct: 7 VLSLEPQHELKFRGPFTDVVTTNLKLGNPTDRNVCFKVKTTAPRRYCVRPNSGIIDAGAS 66
Query: 65 CAVTVTMQAQKEAPPDFQCKDKFLLLSVVAPDGATAKDIGPDMFTKEDGKVVEEFKLRVV 124
V+V +Q + P+ + K KF++ S+ AP + + ED + + KLR V
Sbjct: 67 INVSVMLQPF-DYDPNEKSKHKFMVQSMFAPADTSDMEAAWKEAKPED---LMDSKLRCV 122
Query: 125 Y-IPANPPSPVPEGSEEGSSPRAFSQEN---GNHHNSSFDD--VSKSLEVPKEKSSEAWS 178
+ +PA P + S A E +S+ DD V K +E K SE
Sbjct: 123 FELPAENDKPHDVEINKIISTTASKTETPVVSKALSSALDDTEVKKVMEECKRLQSE--- 179
Query: 179 MISKLTEEKTSAMQQNQKLRQE--LEFVRKEISKSRA---------GGFST---VFVLLI 224
+ +L EE N++L++E L + +S S A G ST V+L
Sbjct: 180 -VQRLREE-------NKQLKEEDGLRMRKPVLSNSPAPAPATPGKEEGLSTRLLALVVLF 231
Query: 225 GLLGILVGYL 234
++G+++G +
Sbjct: 232 FIVGVIIGKI 241
>sp|Q9QY76|VAPB_MOUSE Vesicle-associated membrane protein-associated protein B OS=Mus
musculus GN=Vapb PE=2 SV=3
Length = 243
Score = 66.2 bits (160), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 102/205 (49%), Gaps = 28/205 (13%)
Query: 6 LVNIQP-SELKFPFELKKQSSCSMQLTNKTDKFVAFKVKTTNPKKYCVRPNTGIILPRTS 64
+++++P ELKF + +++L N TD+ V FKVKTT P++YCVRPN+G+I S
Sbjct: 7 VLSLEPQHELKFRGPFTDVVTTNLKLGNPTDRNVCFKVKTTVPRRYCVRPNSGVIDAGAS 66
Query: 65 CAVTVTMQAQKEAPPDFQCKDKFLLLSVVAPDGATAKDIGPDMFTKEDGKVVEEFKLRVV 124
V+V +Q + P+ + K KF++ S+ AP + + ED + + KLR V
Sbjct: 67 LNVSVMLQPF-DYDPNEKSKHKFMVQSMFAPPDTSDMEAVWKEAKPED---LMDSKLRCV 122
Query: 125 Y-IPANPPSPVPEGSEEGSSPRAFSQENGNHHNSSFDDVSKSLEVPKEKSSEAWSMISKL 183
+ +PA EN H+ + + + E + A S+ S L
Sbjct: 123 FELPA---------------------ENAKPHDVEINKIIPTSASKTEAPAAAKSLTSPL 161
Query: 184 TE-EKTSAMQQNQKLRQELEFVRKE 207
+ E M++ ++L+ E++ +R+E
Sbjct: 162 DDTEVKKVMEECRRLQGEVQRLREE 186
>sp|Q6Q595|SCS22_YEAST Vesicle-associated membrane protein-associated protein SCS22
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=SCS22 PE=1 SV=2
Length = 175
Score = 65.9 bits (159), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 78/157 (49%), Gaps = 16/157 (10%)
Query: 7 VNIQPSELKFPFELKKQSSCSMQLTNKTDKFVAFKVKTTNPKKYCVRPNTGIILPRTSCA 66
+ I P +L F L KQS+ ++L N +K V FKV+T+ P KYCVRPN II S
Sbjct: 1 MRIVPEKLVFKAPLNKQSTEYIKLENDGEKRVIFKVRTSAPTKYCVRPNVAIIGAHESVN 60
Query: 67 VTVTMQAQKEAPPD---FQCKDKFLLLSVVAP-------DGATAKDIGPDMFTK-EDGKV 115
V + ++ D Q +DKFL++++ P DG D P++ + +D V
Sbjct: 61 VQIVFLGLPKSTADDEMDQKRDKFLIVTLPIPAAYQNVEDGELLSD-WPNLEEQYKDDIV 119
Query: 116 VEEFKLRVVYIPANPPSPVPEGSEEGSSPRAFSQENG 152
++ K+ +P PS G+ + S RA S NG
Sbjct: 120 FKKIKIFHSVLPKRKPS----GNHDAESARAPSAGNG 152
>sp|O95292|VAPB_HUMAN Vesicle-associated membrane protein-associated protein B/C
OS=Homo sapiens GN=VAPB PE=1 SV=3
Length = 243
Score = 64.7 bits (156), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 58/91 (63%), Gaps = 2/91 (2%)
Query: 6 LVNIQP-SELKFPFELKKQSSCSMQLTNKTDKFVAFKVKTTNPKKYCVRPNTGIILPRTS 64
+++++P ELKF + +++L N TD+ V FKVKTT P++YCVRPN+GII S
Sbjct: 7 VLSLEPQHELKFRGPFTDVVTTNLKLGNPTDRNVCFKVKTTAPRRYCVRPNSGIIDAGAS 66
Query: 65 CAVTVTMQAQKEAPPDFQCKDKFLLLSVVAP 95
V+V +Q + P+ + K KF++ S+ AP
Sbjct: 67 INVSVMLQPF-DYDPNEKSKHKFMVQSMFAP 96
>sp|Q9Z269|VAPB_RAT Vesicle-associated membrane protein-associated protein B OS=Rattus
norvegicus GN=Vapb PE=1 SV=3
Length = 243
Score = 63.9 bits (154), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 100/205 (48%), Gaps = 28/205 (13%)
Query: 6 LVNIQP-SELKFPFELKKQSSCSMQLTNKTDKFVAFKVKTTNPKKYCVRPNTGIILPRTS 64
+++++P ELKF + +++L N TD+ V FKVKTT P++YCVRPN+G+I S
Sbjct: 7 VLSLEPQHELKFRGPFTDVVTTNLKLGNPTDRNVCFKVKTTAPRRYCVRPNSGVIDAGAS 66
Query: 65 CAVTVTMQAQKEAPPDFQCKDKFLLLSVVAPDGATAKDIGPDMFTKEDGKVVEEFKLRVV 124
V+V +Q + P+ + K KF++ S+ AP + + ED + + KLR V
Sbjct: 67 LNVSVMLQPF-DYDPNEKSKHKFMVQSMFAPPDTSDMEAVWKEAKPED---LMDSKLRCV 122
Query: 125 Y-IPANPPSPVPEGSEEGSSPRAFSQENGNHHNSSFDDVSKSLEVPKEKSSEAWSMISKL 183
+ +PA EN H+ + + + E A + S L
Sbjct: 123 FELPA---------------------ENAKPHDVEINKIMPTSASKTEAPVAAKPLTSPL 161
Query: 184 TE-EKTSAMQQNQKLRQELEFVRKE 207
+ E M++ ++L+ E++ +R+E
Sbjct: 162 DDAEVKKVMEECRRLQGEVQRLREE 186
>sp|Q1ECE0|VAP41_ARATH Vesicle-associated protein 4-1 OS=Arabidopsis thaliana GN=PVA41
PE=2 SV=1
Length = 266
Score = 57.4 bits (137), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 66/126 (52%), Gaps = 8/126 (6%)
Query: 12 SELKFPFELKKQSSCSMQLTNKTDKFVAFKVKTTNPKKYCVRPNTGIILPRTSCAVTV-- 69
S L FP+E KQ +++L N + AFK +TT PK +RP G++ P S TV
Sbjct: 83 SYLYFPYEPGKQVRSAIKLKNTSKSHTAFKFQTTAPKSCYMRPPGGVLAPGESVFATVFK 142
Query: 70 ---TMQAQKEAPPDFQCKDKFLLLSVVAPDGATAKDIGPDMFTKEDGKVVEEFKLRVVYI 126
+ ++ P + + K KF ++S+ G + P++F ++ +V E LRV++I
Sbjct: 143 FVEHPENNEKQPLNQKSKVKFKIMSLKVKPGV---EYVPELFDEQKDQVAVEQVLRVIFI 199
Query: 127 PANPPS 132
A+ PS
Sbjct: 200 DADRPS 205
>sp|Q8VYN2|VAP42_ARATH Vesicle-associated protein 4-2 OS=Arabidopsis thaliana GN=PVA42
PE=1 SV=1
Length = 295
Score = 54.3 bits (129), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 66/131 (50%), Gaps = 8/131 (6%)
Query: 1 MSTGDLVNIQPSE-LKFPFELKKQSSCSMQLTNKTDKFVAFKVKTTNPKKYCVRPNTGII 59
+ T + + PSE L FP+E KQ ++++ N + VAFK +TT PK +RP I+
Sbjct: 102 LPTKRRLKLDPSEKLYFPYEPGKQVRSAIKIKNTSKSHVAFKFQTTAPKSCFMRPPGAIL 161
Query: 60 LPRTSCAVTVTMQAQ----KEAPPDFQCKDKFLLLSVVAPDGATAKDIGPDMFTKEDGKV 115
P + TV + E P D + + KF ++S+ D P++F ++ V
Sbjct: 162 APGETIIATVFKFVEPPENNEKPMDQRSRVKFKIMSLKV---KGPMDYVPELFDEQKDDV 218
Query: 116 VEEFKLRVVYI 126
+E LRV+++
Sbjct: 219 SKEQILRVIFL 229
>sp|Q8LPQ7|VAP43_ARATH Vesicle-associated protein 4-3 OS=Arabidopsis thaliana GN=PVA43
PE=2 SV=1
Length = 287
Score = 53.5 bits (127), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 68/138 (49%), Gaps = 9/138 (6%)
Query: 1 MSTGDLVNIQPS-ELKFPFELKKQSSCSMQLTNKTDKFVAFKVKTTNPKKYCVRPNTGII 59
+ T + + PS +L FP+E KQ ++++ N + VAFK +TT PK +RP I+
Sbjct: 94 LPTKRRLKLDPSAKLYFPYEPGKQVRSAIKIKNTSKSHVAFKFQTTVPKSCFMRPAGAIL 153
Query: 60 LPRTSCAVTVTMQAQ----KEAPPDFQCKDKFLLLSVVAPDGATAKDIGPDMFTKEDGKV 115
P TV + E P + + KF ++S+ D P++F ++ V
Sbjct: 154 APGEEIIATVFKFVEPPENNEKPMEQKSGVKFKIMSLKM---KVPTDYMPELFEEQKDHV 210
Query: 116 VEEFKLRVVYI-PANPPS 132
EE +RVV++ P NP S
Sbjct: 211 SEEQVMRVVFLDPENPNS 228
>sp|Q8NHP6|MSPD2_HUMAN Motile sperm domain-containing protein 2 OS=Homo sapiens GN=MOSPD2
PE=1 SV=1
Length = 518
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 63/134 (47%), Gaps = 12/134 (8%)
Query: 4 GDLVNIQPSE-LKFPFELKKQSSCSMQLTNKTDKFVAFKVKTTNPKKYCVRPNTGIILPR 62
G L++I P+E L F + + LTN T VAFKV+TT P+KY V+P+ P
Sbjct: 325 GPLLHISPAEELYFGSTESGEKKTLIVLTNVTKNIVAFKVRTTAPEKYRVKPSNSSCDPG 384
Query: 63 TSCAVTVTMQAQKEAPPDFQCKDKFLLLSVVAPDGATAKDIGPDMFTKEDGKV----VEE 118
S + V+ +D+FL++ A + + GP T+ +V V E
Sbjct: 385 ASVDIVVSPHGGLTV----SAQDRFLIM---AAEMEQSSGTGPAELTQFWKEVPRNKVME 437
Query: 119 FKLRVVYIPANPPS 132
+LR + ++ P+
Sbjct: 438 HRLRCHTVESSKPN 451
>sp|Q9CWP6|MSPD2_MOUSE Motile sperm domain-containing protein 2 OS=Mus musculus GN=Mospd2
PE=1 SV=2
Length = 518
Score = 42.0 bits (97), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 65/137 (47%), Gaps = 14/137 (10%)
Query: 4 GDLVNIQPSE-LKFPFELKKQSSCSMQLTNKTDKFVAFKVKTTNPKKYCVRPNTGIILPR 62
G L++I P+E L F + + LTN T VAFKV+TT P+KY V+P+ P
Sbjct: 325 GPLLHISPAEELYFGSIESGEKKTLIVLTNVTKNIVAFKVRTTAPEKYRVKPSNSSCDPG 384
Query: 63 TSCAVTVTMQAQKEAPPDFQCKDKFLLLSVVAPDGATAKDIGP---DMFTKE--DGKVVE 117
S + V+ +D+FL++ A + + GP F KE KV+E
Sbjct: 385 ASIDIIVSPHGGLTV----SAQDRFLIM---AAEMEQSSGTGPAELSQFWKEVPRNKVME 437
Query: 118 EFKLRVVYIPANPPSPV 134
+LR + ++ P+ +
Sbjct: 438 H-RLRCHTVESSKPNSL 453
>sp|P27440|MSP2_ASCSU Major sperm protein isoform beta OS=Ascaris suum PE=1 SV=3
Length = 127
Score = 40.8 bits (94), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 47/96 (48%), Gaps = 3/96 (3%)
Query: 4 GDLVNIQP-SELKFPFELKKQSSCSMQLTNKTDKFVAFKVKTTNPKKYCVRPNTGIILPR 62
GD +N QP S++ F + + +++TN + + + +KTTN ++ V P G++ P+
Sbjct: 8 GD-INTQPGSKIVFNAPYDDKHTYHIKITNAGGRRIGWAIKTTNMRRLGVDPPCGVLDPK 66
Query: 63 TSCAVTVTMQAQKEAPPDFQCKDKFLLLSVVAPDGA 98
S + V+ A D D+ + PDGA
Sbjct: 67 ESVLMAVSCDTFNAATEDLN-NDRITIEWTNTPDGA 101
>sp|P27439|MSP1_ASCSU Major sperm protein isoform alpha OS=Ascaris suum PE=1 SV=3
Length = 127
Score = 39.7 bits (91), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 54/113 (47%), Gaps = 5/113 (4%)
Query: 4 GDLVNIQPSE-LKFPFELKKQSSCSMQLTNKTDKFVAFKVKTTNPKKYCVRPNTGIILPR 62
GD +N QPS+ + F + + +++TN + + + +KTTN ++ V P G++ P+
Sbjct: 8 GD-INTQPSQKIVFNAPYDDKHTYHIKITNAGGRRIGWAIKTTNMRRLSVDPPCGVLDPK 66
Query: 63 TSCAVTVTMQAQKEAPPDFQCKDKFLLLSVVAPDGATAKDIGPDMFTKEDGKV 115
+ V+ A D D+ + PDGA AK + F + DG V
Sbjct: 67 EKVLMAVSCDTFNAATEDLN-NDRITIEWTNTPDGA-AKQFRREWF-QGDGMV 116
>sp|Q92JK8|CLPB_RICCN Chaperone protein ClpB OS=Rickettsia conorii (strain ATCC VR-613 /
Malish 7) GN=clpB PE=3 SV=1
Length = 857
Score = 37.4 bits (85), Expect = 0.094, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 38/66 (57%), Gaps = 4/66 (6%)
Query: 146 AFSQENGNHHNSSFDDVSKSLEVPKEKSSEAWSMISKLTEEKTSAMQQNQKLRQELEFVR 205
A +EN H + ++ +LE + S+++ M +K EK S +QQ QKL++EL+ R
Sbjct: 429 ALKKENDEHSKKKIEHLTTALE---KLESQSYDMGAKWQAEK-SKLQQTQKLKEELDRSR 484
Query: 206 KEISKS 211
E+ ++
Sbjct: 485 NELERA 490
>sp|P34538|YNC5_CAEEL Uncharacterized protein R05D3.5 OS=Caenorhabditis elegans
GN=R05D3.5 PE=2 SV=3
Length = 178
Score = 36.6 bits (83), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 43/85 (50%), Gaps = 2/85 (2%)
Query: 19 ELKKQSSCSMQLTNKTDKFVAFKVKTTNPKKYCVRPNTGIILPRTSCAVTVTMQAQKEAP 78
E +K S +++L N T V++KV+ T+ + V+P G + P + ++ + Q Q +
Sbjct: 76 EDRKPISVNLKLHNPTAVTVSYKVRCTSADIFRVQPPLGFVKPSETVSIVIWYQNQDKK- 134
Query: 79 PDFQCKDKFLLLSVVAPDGATAKDI 103
D K+ + DG TA+++
Sbjct: 135 -DAISKNHYFAFYHTNSDGRTAREL 158
>sp|P13263|MSP2_ONCVO Major sperm protein 2 OS=Onchocerca volvulus PE=2 SV=3
Length = 127
Score = 36.2 bits (82), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/95 (23%), Positives = 43/95 (45%), Gaps = 1/95 (1%)
Query: 4 GDLVNIQPSELKFPFELKKQSSCSMQLTNKTDKFVAFKVKTTNPKKYCVRPNTGIILPRT 63
GD+ S++ F + + +++TN + + + +KTTN K+ V P G++ P+
Sbjct: 8 GDIHTQPGSKIVFNAPYDDKHTYHIKITNAGGRRIGWAIKTTNMKRLGVDPPCGVLDPKE 67
Query: 64 SCAVTVTMQAQKEAPPDFQCKDKFLLLSVVAPDGA 98
+ + V+ D D+ + PDGA
Sbjct: 68 NVLMAVSCDTFDATREDIN-NDRITIEWTNTPDGA 101
>sp|P13262|MSP1_ONCVO Major sperm protein 1 OS=Onchocerca volvulus PE=2 SV=3
Length = 127
Score = 36.2 bits (82), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 22/95 (23%), Positives = 42/95 (44%), Gaps = 1/95 (1%)
Query: 4 GDLVNIQPSELKFPFELKKQSSCSMQLTNKTDKFVAFKVKTTNPKKYCVRPNTGIILPRT 63
GD+ S++ F + + + +TN + + + +KTTN K+ V P G++ P+
Sbjct: 8 GDIHTQPGSKIVFNAPYDDKHTYHINITNAGGRRIGWAIKTTNMKRLGVDPPCGVLDPKE 67
Query: 64 SCAVTVTMQAQKEAPPDFQCKDKFLLLSVVAPDGA 98
+ + V+ D D+ + PDGA
Sbjct: 68 NVLMAVSCDTFDATREDIN-NDRITIEWTNTPDGA 101
>sp|P34593|YOD1_CAEEL Uncharacterized protein ZC262.1 OS=Caenorhabditis elegans
GN=ZC262.1 PE=4 SV=1
Length = 131
Score = 35.8 bits (81), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 44/88 (50%), Gaps = 2/88 (2%)
Query: 19 ELKKQSSCSMQLTNKTDKFVAFKVKTTNPKKYCVRPNTGIILPRTSCAVTVTMQAQKEAP 78
E +K S +++L N T V++KV+ T+ + V+P G + P + ++ + Q Q +
Sbjct: 29 EDRKPISVNLKLHNPTAVTVSYKVRCTSADIFRVQPPLGFVKPSETVSIVIWYQNQDKK- 87
Query: 79 PDFQCKDKFLLLSVVAPDGATAKDIGPD 106
D K+ + DG TA+++ +
Sbjct: 88 -DAISKNHYFAFYHTNSDGRTARELWAN 114
>sp|Q9ZEA9|CLPB_RICPR Chaperone protein ClpB OS=Rickettsia prowazekii (strain Madrid E)
GN=clpB PE=3 SV=1
Length = 858
Score = 35.8 bits (81), Expect = 0.27, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 37/66 (56%), Gaps = 4/66 (6%)
Query: 146 AFSQENGNHHNSSFDDVSKSLEVPKEKSSEAWSMISKLTEEKTSAMQQNQKLRQELEFVR 205
A +EN H +++ L K+ S+++ M +K EK S +QQ QKL++ELE R
Sbjct: 429 ALKKENDEHSKKKITSLTEEL---KKLESKSYDMNTKWQAEK-SKLQQAQKLKEELEQAR 484
Query: 206 KEISKS 211
++ ++
Sbjct: 485 IDLERA 490
>sp|Q55FT4|TSUA_DICDI Probable serine/threonine-protein kinase tsuA OS=Dictyostelium
discoideum GN=tsuA PE=1 SV=1
Length = 2247
Score = 35.8 bits (81), Expect = 0.29, Method: Composition-based stats.
Identities = 29/80 (36%), Positives = 40/80 (50%), Gaps = 11/80 (13%)
Query: 151 NGNHHNSSFDDVSKSLEVPKEKSSEAWSM---ISKLTEEKTSAMQQNQKLRQELEFVRKE 207
NGN N D++S++ E +S E W IS +EE S KLR + +F+ K
Sbjct: 1007 NGNSQNERLDEISEASE--SLESLEFWRFHESISFKSEENAS------KLRSDKQFLHKI 1058
Query: 208 ISKSRAGGFSTVFVLLIGLL 227
IS A FS + L IGL+
Sbjct: 1059 ISHLSASSFSMIERLPIGLI 1078
>sp|Q4UN57|CLPB_RICFE Chaperone protein ClpB OS=Rickettsia felis (strain ATCC VR-1525 /
URRWXCal2) GN=clpB PE=3 SV=2
Length = 858
Score = 35.4 bits (80), Expect = 0.35, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 37/66 (56%), Gaps = 4/66 (6%)
Query: 146 AFSQENGNHHNSSFDDVSKSLEVPKEKSSEAWSMISKLTEEKTSAMQQNQKLRQELEFVR 205
A +EN H +++ LE + S+++ M +K EK S +QQ QKL++ELE R
Sbjct: 429 ALKKENDEHSKKKITHLTEELE---KLESKSYDMKAKWQAEK-SKLQQAQKLKEELERAR 484
Query: 206 KEISKS 211
++ ++
Sbjct: 485 IDLERA 490
>sp|Q23246|SSPZC_CAEEL Sperm-specific protein ZC168.6 OS=Caenorhabditis elegans
GN=ZC168.6 PE=1 SV=1
Length = 107
Score = 35.0 bits (79), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 6 LVNIQPSELKFPFELKKQSSCSMQLTNKTDKFVAFKVKTTNPKKYCVRPNTGII 59
++N+ P +P + + +T+++D +AFKVK++N + Y VRP G +
Sbjct: 1 MINVDPPTGNYP---ATGGNSTHNITSESDSRLAFKVKSSNNEHYRVRPVYGFV 51
>sp|Q9XXL3|SSP31_CAEEL Sperm-specific class P protein 31 OS=Caenorhabditis elegans
GN=ssp-31 PE=1 SV=1
Length = 107
Score = 33.9 bits (76), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Query: 6 LVNIQPSELKFPFELKKQSSCSMQLTNKTDKFVAFKVKTTNPKKYCVRPNTGII 59
++NI P +P S + + ++++ +AFKVK++N + Y VRP G +
Sbjct: 1 MINIDPPSGDYP---ASGGSSTHYIVSESESRLAFKVKSSNNESYRVRPVYGFV 51
>sp|Q68XR2|CLPB_RICTY Chaperone protein ClpB OS=Rickettsia typhi (strain ATCC VR-144 /
Wilmington) GN=clpB PE=3 SV=1
Length = 858
Score = 33.9 bits (76), Expect = 1.1, Method: Composition-based stats.
Identities = 20/66 (30%), Positives = 36/66 (54%), Gaps = 4/66 (6%)
Query: 146 AFSQENGNHHNSSFDDVSKSLEVPKEKSSEAWSMISKLTEEKTSAMQQNQKLRQELEFVR 205
A +EN H +++ L K+ S+++ M +K K S +QQ QKL++ELE R
Sbjct: 429 ALKKENDEHSKKKITSLTEEL---KQLDSKSYDMNTKWQAAK-SKLQQAQKLKEELEQAR 484
Query: 206 KEISKS 211
++ ++
Sbjct: 485 IDLDRA 490
>sp|Q94053|MSP78_CAEEL Major sperm protein 78 OS=Caenorhabditis elegans GN=msp-78 PE=2
SV=3
Length = 127
Score = 33.9 bits (76), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 57/124 (45%), Gaps = 4/124 (3%)
Query: 4 GDLVNIQPSELKFPFELKKQSSCSMQLTNKTDKFVAFKVKTTNPKKYCVRPNTGIILPRT 63
GD+ +++ F + + +++ N + + + + +KTTN K+ V P G++ P+
Sbjct: 8 GDIQTQPGTKIVFNAPYDDKHTYHIKVINSSARRIGYGIKTTNMKRLGVDPPCGVLDPKE 67
Query: 64 SCAVTVTMQAQKEAPPDFQCKDKFLLLSVVAPDGATAKDIGPDMFTKEDGKVVEEFKLRV 123
+ + V+ A D D+ + PDGA AK + F + DG +V L +
Sbjct: 68 AVLLAVSCDAFAFGQEDTN-NDRITIEWTNTPDGA-AKQFRREWF-QGDG-MVRRKNLPI 123
Query: 124 VYIP 127
Y P
Sbjct: 124 EYNP 127
>sp|P53023|MSP3_GLORO Major sperm protein 3 OS=Globodera rostochiensis GN=MSP-3 PE=2
SV=2
Length = 126
Score = 33.5 bits (75), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/69 (23%), Positives = 34/69 (49%)
Query: 5 DLVNIQPSELKFPFELKKQSSCSMQLTNKTDKFVAFKVKTTNPKKYCVRPNTGIILPRTS 64
D+ + ++ F +++ +++ N K + F KTT PK+ + P G++ P+ S
Sbjct: 8 DIATMPAQKVVFNAPFDNKATYYVRIINPGTKRIGFAFKTTKPKRINMNPPNGVLGPKES 67
Query: 65 CAVTVTMQA 73
V ++ A
Sbjct: 68 VNVAISCDA 76
>sp|P53022|MSP2_GLORO Major sperm protein 2 OS=Globodera rostochiensis GN=MSP-2 PE=2
SV=2
Length = 126
Score = 33.5 bits (75), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/73 (21%), Positives = 35/73 (47%)
Query: 1 MSTGDLVNIQPSELKFPFELKKQSSCSMQLTNKTDKFVAFKVKTTNPKKYCVRPNTGIIL 60
+ GD+ + ++ F +++ +++ N + F KTT PK+ + P G++
Sbjct: 4 LPPGDIATMPNQKVVFNAPFDNKATYYVRVINPGTNRIGFAFKTTKPKRINMNPPNGVLG 63
Query: 61 PRTSCAVTVTMQA 73
P+ S V ++ A
Sbjct: 64 PKESVNVAISCDA 76
>sp|P53018|MSP32_CAEEL Major sperm protein 32 OS=Caenorhabditis elegans GN=msp-32 PE=2
SV=1
Length = 190
Score = 33.5 bits (75), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 58/123 (47%), Gaps = 5/123 (4%)
Query: 6 LVNIQP-SELKFPFELKKQSSCSMQLTNKTDKFVAFKVKTTNPKKYCVRPNTGIILPRTS 64
++ QP +++ F + + +++ N + + + + +KTTN K+ V P G++ P+ +
Sbjct: 72 MIQTQPGTKIVFNAPYDDKHTYHIKVINSSARRIGYGIKTTNMKRLGVDPPCGVLDPKEA 131
Query: 65 CAVTVTMQAQKEAPPDFQCKDKFLLLSVVAPDGATAKDIGPDMFTKEDGKVVEEFKLRVV 124
+ V+ A D D+ + PDGA AK + F + DG +V L +
Sbjct: 132 VLLAVSCDAFAFGQEDTN-NDRITVEWTNTPDGA-AKQFRREWF-QGDG-MVRRKNLPIE 187
Query: 125 YIP 127
Y P
Sbjct: 188 YNP 190
>sp|O45433|SSP32_CAEEL Sperm-specific class P protein 32 OS=Caenorhabditis elegans
GN=ssp-32 PE=2 SV=1
Length = 107
Score = 33.5 bits (75), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 6 LVNIQPSELKFPFELKKQSSCSMQLTNKTDKFVAFKVKTTNPKKYCVRPNTGIILPR 62
++ I+P FP S + +T+ + +AFKVK++N + Y VRP G + R
Sbjct: 1 MLTIEPPSATFP---ASGGSSTHTITSVNESRMAFKVKSSNNEHYRVRPVYGFVEAR 54
>sp|Q23519|MS152_CAEEL Major sperm protein 152 OS=Caenorhabditis elegans GN=msp-152 PE=2
SV=3
Length = 127
Score = 33.5 bits (75), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 57/124 (45%), Gaps = 4/124 (3%)
Query: 4 GDLVNIQPSELKFPFELKKQSSCSMQLTNKTDKFVAFKVKTTNPKKYCVRPNTGIILPRT 63
GD+ +++ F + + +++ N + + + + +KTTN K+ V P G++ P+
Sbjct: 8 GDIQTQPGTKIVFNAPYDDKHTYHIKVINSSARRIGYGIKTTNMKRLGVDPPCGVLDPKE 67
Query: 64 SCAVTVTMQAQKEAPPDFQCKDKFLLLSVVAPDGATAKDIGPDMFTKEDGKVVEEFKLRV 123
+ + V+ A D D+ + PDGA AK + F + DG +V L +
Sbjct: 68 AVLLAVSCDAFAFGQEDTN-NDRITVEWTNTPDGA-AKQFRREWF-QGDG-MVRRKNLPI 123
Query: 124 VYIP 127
Y P
Sbjct: 124 EYNP 127
>sp|P53021|MSP1_GLORO Major sperm protein 1 OS=Globodera rostochiensis GN=MSP-1 PE=2
SV=2
Length = 126
Score = 33.5 bits (75), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/69 (23%), Positives = 34/69 (49%)
Query: 5 DLVNIQPSELKFPFELKKQSSCSMQLTNKTDKFVAFKVKTTNPKKYCVRPNTGIILPRTS 64
D+ + ++ F +++ +++ N K + F KTT PK+ + P G++ P+ S
Sbjct: 8 DIATMPAQKVVFNAPFDNKATYYVRIINPGTKRIGFAFKTTKPKRINMNPPNGVLGPKES 67
Query: 65 CAVTVTMQA 73
V ++ A
Sbjct: 68 VNVAISCDA 76
>sp|P53017|MSP19_CAEEL Major sperm protein 19/31/40/45/50/51/53/59/61/65/81/113/142
OS=Caenorhabditis elegans GN=msp-19 PE=1 SV=2
Length = 127
Score = 33.5 bits (75), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 57/124 (45%), Gaps = 4/124 (3%)
Query: 4 GDLVNIQPSELKFPFELKKQSSCSMQLTNKTDKFVAFKVKTTNPKKYCVRPNTGIILPRT 63
GD+ +++ F + + +++ N + + + + +KTTN K+ V P G++ P+
Sbjct: 8 GDIQTQPGTKIVFNAPYDDKHTYHIKVINSSARRIGYGIKTTNMKRLGVDPPCGVLDPKE 67
Query: 64 SCAVTVTMQAQKEAPPDFQCKDKFLLLSVVAPDGATAKDIGPDMFTKEDGKVVEEFKLRV 123
+ + V+ A D D+ + PDGA AK + F + DG +V L +
Sbjct: 68 AVLLAVSCDAFAFGQEDTN-NDRITVEWTNTPDGA-AKQFRREWF-QGDG-MVRRKNLPI 123
Query: 124 VYIP 127
Y P
Sbjct: 124 EYNP 127
>sp|Q19832|MSP3_CAEEL Major sperm protein 3 OS=Caenorhabditis elegans GN=msp-3 PE=2 SV=3
Length = 127
Score = 33.5 bits (75), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/95 (22%), Positives = 44/95 (46%), Gaps = 1/95 (1%)
Query: 4 GDLVNIQPSELKFPFELKKQSSCSMQLTNKTDKFVAFKVKTTNPKKYCVRPNTGIILPRT 63
GD+ +++ F + + +++ N + + + + +KTTN K+ V P G++ P+
Sbjct: 8 GDIQTQPGTKIVFNAPYDDKHTYHIKVINSSARRIGYGIKTTNMKRLGVDPPCGVLDPKE 67
Query: 64 SCAVTVTMQAQKEAPPDFQCKDKFLLLSVVAPDGA 98
+ + V+ A D D+ + PDGA
Sbjct: 68 AVLLAVSCDAFAFGQEDTN-NDRITVEWTNTPDGA 101
>sp|Q9TVW5|MSP77_CAEEL Major sperm protein 77/79 OS=Caenorhabditis elegans GN=msp-77 PE=2
SV=3
Length = 127
Score = 33.5 bits (75), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/95 (22%), Positives = 44/95 (46%), Gaps = 1/95 (1%)
Query: 4 GDLVNIQPSELKFPFELKKQSSCSMQLTNKTDKFVAFKVKTTNPKKYCVRPNTGIILPRT 63
GD+ +++ F + + +++ N + + + + +KTTN K+ V P G++ P+
Sbjct: 8 GDIQTQPGTKIVFNAPYDDKHTYHIKVINSSARRIGYGIKTTNMKRLGVDPPCGVLDPKE 67
Query: 64 SCAVTVTMQAQKEAPPDFQCKDKFLLLSVVAPDGA 98
+ + V+ A D D+ + PDGA
Sbjct: 68 AVLLAVSCDAFAFGQEDTN-NDRITVEWTNTPDGA 101
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.130 0.365
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 87,786,972
Number of Sequences: 539616
Number of extensions: 3639016
Number of successful extensions: 12009
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 73
Number of HSP's successfully gapped in prelim test: 52
Number of HSP's that attempted gapping in prelim test: 11892
Number of HSP's gapped (non-prelim): 149
length of query: 238
length of database: 191,569,459
effective HSP length: 114
effective length of query: 124
effective length of database: 130,053,235
effective search space: 16126601140
effective search space used: 16126601140
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 59 (27.3 bits)