BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026479
(238 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O80674|BH106_ARATH Transcription factor bHLH106 OS=Arabidopsis thaliana GN=BHLH106
PE=2 SV=1
Length = 253
Score = 275 bits (703), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 162/255 (63%), Positives = 201/255 (78%), Gaps = 21/255 (8%)
Query: 1 MQPENSE--LYRFLAQNGVGYYGFPGSACEFSSMMQQSFCSSSSYS---FPLEVSGLTET 55
MQPE S+ LY FLA N VG G+ S ++M QS C SSS + +PL +SG+ ET
Sbjct: 1 MQPETSDQMLYSFLAGNEVGGGGYCVSGDYMTTM--QSLCGSSSSTSSYYPLAISGIGET 58
Query: 56 TPEDRALAALKNHKEAEKRRRERINSHLNKLRSILSCNSKLDKASLLARVVQRVRELKEQ 115
+DRALAAL+NHKEAE+RRRERINSHLNKLR++LSCNSK DKA+LLA+VVQRVRELK+Q
Sbjct: 59 MAQDRALAALRNHKEAERRRRERINSHLNKLRNVLSCNSKTDKATLLAKVVQRVRELKQQ 118
Query: 116 TIELTEVES--FPSETDEITVLASSDYSSDGTLIFKASLCCEDRSDLLPDIIEILKSLHL 173
T+E ++ + PSETDEI+VL DYS+DG +IFKASLCCEDRSDLLPD++EILKSL++
Sbjct: 119 TLETSDSDQTLLPSETDEISVLHFGDYSNDGHIIFKASLCCEDRSDLLPDLMEILKSLNM 178
Query: 174 KTLKSEMVTLGGRIRNVLIIAAEKD-HSIESVHFLQNALKSLLERSNSS----------- 221
KTL++EMVT+GGR R+VL++AA+K+ H +ESVHFLQNALKSLLERS+ S
Sbjct: 179 KTLRAEMVTIGGRTRSVLVVAADKEMHGVESVHFLQNALKSLLERSSKSLMERSSGGGGG 238
Query: 222 DRSKRRRVLDHKIMI 236
+RSKRRR LDH IM+
Sbjct: 239 ERSKRRRALDHIIMV 253
>sp|Q9LET0|BH107_ARATH Putative transcription factor bHLH107 OS=Arabidopsis thaliana
GN=BHLH107 PE=2 SV=1
Length = 230
Score = 227 bits (578), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 124/222 (55%), Positives = 164/222 (73%), Gaps = 15/222 (6%)
Query: 29 FSSMMQQSFCSSSSYSFPLEVSGLTETTPEDRALAALKNHKEAEKRRRERINSHLNKLRS 88
F + + C+SS+ + S T ED+ALA+L+NHKEAE++RR RINSHLNKLR
Sbjct: 10 FYAFLTGGLCASSTSTTVTSSSDPFATVYEDKALASLRNHKEAERKRRARINSHLNKLRK 69
Query: 89 ILSCNSKLDKASLLARVVQRVRELKEQTIELTEVESFPSETDEITVLASSDYS--SDGTL 146
+LSCNSK DK++LLA+VVQRV+ELK+QT+E+T+ E+ PSETDEI+VL D S D +
Sbjct: 70 LLSCNSKTDKSTLLAKVVQRVKELKQQTLEITD-ETIPSETDEISVLNIEDCSRGDDRRI 128
Query: 147 IFKASLCCEDRSDLLPDIIEILKSLHLKTLKSEMVTLGGRIRNVLIIAAEKD-HSIESVH 205
IFK S CCEDR +LL D++E LKSL ++TL ++M T+GGR RNVL++AA+K+ H ++SV+
Sbjct: 129 IFKVSFCCEDRPELLKDLMETLKSLQMETLFADMTTVGGRTRNVLVVAADKEHHGVQSVN 188
Query: 206 FLQNALKSLLERSNSS-----------DRSKRRRVLDHKIMI 236
FLQNALKSLLERS+ S +R KRRR LDH IM+
Sbjct: 189 FLQNALKSLLERSSKSVMVGHGGGGGEERLKRRRALDHIIMV 230
>sp|Q9S7Y1|BH030_ARATH Transcription factor bHLH30 OS=Arabidopsis thaliana GN=BHLH30 PE=1
SV=1
Length = 368
Score = 160 bits (404), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 103/241 (42%), Positives = 146/241 (60%), Gaps = 23/241 (9%)
Query: 18 GYYGFPGSACEFSSMMQQ-----------SFCSSSSYSFPLEVSGLTETTPED-RALAAL 65
GY GF G+ +Q S + E+ +T D +ALAA
Sbjct: 116 GYEGFGGATSAAHHHHEQLRILSEALGPVVQAGSGPFGLQAELGKMTAQEIMDAKALAAS 175
Query: 66 KNHKEAEKRRRERINSHLNKLRSILSCNSKLDKASLLARVVQRVRELKEQTIELTEVESF 125
K+H EAE+RRRERIN+HL KLRSIL +K DKASLLA V+Q V+ELK +T ++E
Sbjct: 176 KSHSEAERRRRERINNHLAKLRSILPNTTKTDKASLLAEVIQHVKELKRETSVISETNLV 235
Query: 126 PSETDEITV-LASSDYSSDGTLIFKASLCCEDRSDLLPDIIEILKSLHLKTLKSEMVTLG 184
P+E+DE+TV + + DG + KASLCCEDRSDLLPD+I+ LK++ LKTLK+E+ T+G
Sbjct: 236 PTESDELTVAFTEEEETGDGRFVIKASLCCEDRSDLLPDMIKTLKAMRLKTLKAEITTVG 295
Query: 185 GRIRNVLIIAAEKDHSIES-----VHFLQNALKSLLERSN-----SSDRSKRRRVLDHKI 234
GR++NVL + E+ E + ++ ALK+++E+SN SS +KR+R+ H
Sbjct: 296 GRVKNVLFVTGEESSGEEVEEEYCIGTIEEALKAVMEKSNVEESSSSGNAKRQRMSSHNT 355
Query: 235 M 235
+
Sbjct: 356 I 356
>sp|Q9LS08|BH032_ARATH Transcription factor AIG1 OS=Arabidopsis thaliana GN=BHLH32 PE=1
SV=1
Length = 344
Score = 144 bits (362), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 80/161 (49%), Positives = 116/161 (72%), Gaps = 3/161 (1%)
Query: 40 SSSYSFPLEVSGL--TETTPEDRALAALKNHKEAEKRRRERINSHLNKLRSILSCNSKLD 97
SS+ F E+ G + + +ALAA K+H EAE+RRRERIN+HL KLRSIL +K D
Sbjct: 106 GSSFGFDGEIMGKLSAQEVMDAKALAASKSHSEAERRRRERINTHLAKLRSILPNTTKTD 165
Query: 98 KASLLARVVQRVRELKEQTIELTEVESFPSETDEITVLASSDYSSDGTLIFKASLCCEDR 157
KASLLA V+Q ++ELK QT ++T+ P+E D++TV +S + +G L+ +AS CC+DR
Sbjct: 166 KASLLAEVIQHMKELKRQTSQITDTYQVPTECDDLTVDSSYN-DEEGNLVIRASFCCQDR 224
Query: 158 SDLLPDIIEILKSLHLKTLKSEMVTLGGRIRNVLIIAAEKD 198
+DL+ D+I LKSL L+TLK+E+ T+GGR++N+L ++ E D
Sbjct: 225 TDLMHDVINALKSLRLRTLKAEIATVGGRVKNILFLSREYD 265
>sp|Q9XEF0|BH051_ARATH Transcription factor bHLH51 OS=Arabidopsis thaliana GN=BHLH51 PE=2
SV=1
Length = 254
Score = 124 bits (312), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 69/162 (42%), Positives = 111/162 (68%), Gaps = 13/162 (8%)
Query: 39 SSSSY--SFPLE--VSGLTETTPEDRALAALKNHKEAEKRRRERINSHLNKLRSILSCNS 94
SSSS+ +FP + V G+ ++A + ++H+ AEKRRR+RINSHL LR ++ +
Sbjct: 40 SSSSFGGNFPADDCVGGI------EKAESLSRSHRLAEKRRRDRINSHLTALRKLVPNSD 93
Query: 95 KLDKASLLARVVQRVRELKEQTIELTEVESFPSETDEITVLAS--SDYSSD-GTLIFKAS 151
KLDKA+LLA V+++V+ELK++ E + P+E DE+TV SD+ S+ T+IFKAS
Sbjct: 94 KLDKAALLATVIEQVKELKQKAAESPIFQDLPTEADEVTVQPETISDFESNTNTIIFKAS 153
Query: 152 LCCEDRSDLLPDIIEILKSLHLKTLKSEMVTLGGRIRNVLII 193
CCED+ + + +II +L L L+T+++E++++GGR+R I+
Sbjct: 154 FCCEDQPEAISEIIRVLTKLQLETIQAEIISVGGRMRINFIL 195
>sp|P0CB25|BH131_ARATH Transcription factor bHLH131 OS=Arabidopsis thaliana GN=BHLH131
PE=2 SV=1
Length = 256
Score = 84.7 bits (208), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 93/168 (55%), Gaps = 10/168 (5%)
Query: 29 FSSMMQQSFCSSSSYSFPLEVSGLTETTPEDRALA---ALKNHKEAEKRRRERINSHLNK 85
+S+ M +SF + ++ S L G + T P+ + + A K H +AE+RRR RINS
Sbjct: 54 YSTTMGRSFFAGAATSSKLFSRGFSVTKPKSKTESKEVAAKKHSDAERRRRLRINSQFAT 113
Query: 86 LRSILSCNSKLDKASLLARVVQRVRELKEQTIELTEVESFPSETDEITVLASSDYSSDGT 145
LR+IL K DKAS+L V+ ELK+ + ++ + PS D + + D+ ++
Sbjct: 114 LRTILPNLVKQDKASVLGETVRYFNELKKM---VQDIPTTPSLEDNLRL----DHCNNNR 166
Query: 146 LIFKASLCCEDRSDLLPDIIEILKSLHLKTLKSEMVTLGGRIRNVLII 193
+ + C DR L+ ++ E +K++ K +++E++T+GGR + L +
Sbjct: 167 DLARVVFSCSDREGLMSEVAESMKAVKAKAVRAEIMTVGGRTKCALFV 214
>sp|Q2HIV9|BH035_ARATH Transcription factor bHLH35 OS=Arabidopsis thaliana GN=BHLH35 PE=2
SV=1
Length = 248
Score = 54.7 bits (130), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 90/191 (47%), Gaps = 35/191 (18%)
Query: 44 SFPLE--VSG-LTETTPEDRALAALKNHKEAEKRRRERINSHLNKLRSILSCNSKLDKAS 100
S+PLE +SG ++P+ A + + +E+ RR+++N L LRS++ +K+DKAS
Sbjct: 29 SWPLEEAISGSYDSSSPDGAASSPASKNIVSERNRRQKLNQRLFALRSVVPNITKMDKAS 88
Query: 101 LLARVVQRVREL----KEQTIELTEVESFPSET---------DEITVLASS-----DYSS 142
++ + + L K+ E+ E+ES P + D + + S D S
Sbjct: 89 IIKDAISYIEGLQYEEKKLEAEIRELESTPKSSLSFSKDFDRDLLVPVTSKKMKQLDSGS 148
Query: 143 DGTLI--------------FKASLCCEDRSDLLPDIIEILKSLHLKTLKSEMVTLGGRIR 188
+LI S+ C R+D + + E+ +SL+LK L S + + G I
Sbjct: 149 STSLIEVLELKVTFMGERTMVVSVTCNKRTDTMVKLCEVFESLNLKILTSNLTSFSGMIF 208
Query: 189 NVLIIAAEKDH 199
+ + I A+++
Sbjct: 209 HTVFIEADEEE 219
>sp|O23090|BH014_ARATH Transcription factor bHLH14 OS=Arabidopsis thaliana GN=BHLH14 PE=2
SV=1
Length = 423
Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 63/120 (52%), Gaps = 4/120 (3%)
Query: 15 NGVGYYGFPGSACEFSSMMQQSFCSSSSYSFPLEVSGLTETTPEDRALAALKNHKEAEKR 74
N G Y P + + S Q F S LE + + T E A L +H EAEK+
Sbjct: 199 NQTGSYPKP-AVSDHSKSGNQQFGSERKRRRKLETTRVAAATKEKHHPAVL-SHVEAEKQ 256
Query: 75 RRERINSHLNKLRSILSCNSKLDKASLLARVVQRVRELKEQTIEL-TEVESFP-SETDEI 132
RRE++N LR+I+ S++DKASLL+ V + LK + +L TE++ +ETD++
Sbjct: 257 RREKLNHRFYALRAIVPKVSRMDKASLLSDAVSYIESLKSKIDDLETEIKKMKMTETDKL 316
>sp|Q9ZPY8|AIB_ARATH Transcription factor ABA-INDUCIBLE bHLH-TYPE OS=Arabidopsis
thaliana GN=AIB PE=2 SV=2
Length = 566
Score = 52.4 bits (124), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 47/73 (64%), Gaps = 6/73 (8%)
Query: 67 NHKEAEKRRRERINSHLNKLRSILSCNSKLDKASLLARVVQRVRELKEQTIELTEVESFP 126
NH EAE++RRE++N LRS++ SK+DKASLL + ++EL+E+ +++ E E
Sbjct: 395 NHVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAISYIKELQEK-VKIMEDERVG 453
Query: 127 -----SETDEITV 134
SE++ ITV
Sbjct: 454 TDKSLSESNTITV 466
>sp|Q39204|RAP1_ARATH Transcription factor MYC2 OS=Arabidopsis thaliana GN=RAP1 PE=1 SV=2
Length = 623
Score = 51.2 bits (121), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Query: 67 NHKEAEKRRRERINSHLNKLRSILSCNSKLDKASLLARVVQRVRELKEQTIELTEVE 123
NH EAE++RRE++N LR+++ SK+DKASLL + + ELK + ++ TE E
Sbjct: 452 NHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAIAYINELKSKVVK-TESE 507
>sp|Q9ZVX2|AMS_ARATH Transcription factor ABORTED MICROSPORES OS=Arabidopsis thaliana
GN=AMS PE=1 SV=2
Length = 571
Score = 51.2 bits (121), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 50/86 (58%), Gaps = 2/86 (2%)
Query: 71 AEKRRRERINSHLNKLRSILSCNSKLDKASLLARVVQRVRELKEQTIELTEVESFPSETD 130
AE+RRR+++N L LRS++ +KLD+AS+L + V+EL+ + EL + SET+
Sbjct: 318 AERRRRKKLNDRLYALRSLVPRITKLDRASILGDAINYVKELQNEAKELQDELEENSETE 377
Query: 131 EITVLASSDYSSDGTLI--FKASLCC 154
+ + S +GT++ F L C
Sbjct: 378 DGSNRPQGGMSLNGTVVTGFHPGLSC 403
>sp|Q9FIP9|ATR2_ARATH Transcription factor ATR2 OS=Arabidopsis thaliana GN=ATR2 PE=1 SV=1
Length = 592
Score = 48.9 bits (115), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 32/47 (68%)
Query: 67 NHKEAEKRRRERINSHLNKLRSILSCNSKLDKASLLARVVQRVRELK 113
NH EAE++RRE++N LR+++ SK+DKASLL + + ELK
Sbjct: 415 NHVEAERQRREKLNQRFYSLRAVVPNVSKMDKASLLGDAISYINELK 461
>sp|O49687|BH004_ARATH Transcription factor MYC4 OS=Arabidopsis thaliana GN=BHLH4 PE=2
SV=1
Length = 589
Score = 48.1 bits (113), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 32/47 (68%)
Query: 67 NHKEAEKRRRERINSHLNKLRSILSCNSKLDKASLLARVVQRVRELK 113
NH EAE++RRE++N LR+++ SK+DKASLL + + ELK
Sbjct: 416 NHVEAERQRREKLNQRFYSLRAVVPNVSKMDKASLLGDAISYISELK 462
>sp|Q9LNJ5|BH013_ARATH Transcription factor bHLH13 OS=Arabidopsis thaliana GN=BHLH13 PE=2
SV=1
Length = 590
Score = 47.8 bits (112), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 31/46 (67%)
Query: 67 NHKEAEKRRRERINSHLNKLRSILSCNSKLDKASLLARVVQRVREL 112
NH EAE++RRE++N LRS++ SK+DKASLL V + EL
Sbjct: 433 NHVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAVSYINEL 478
>sp|O23487|BH003_ARATH Transcription factor bHLH3 OS=Arabidopsis thaliana GN=BHLH3 PE=2
SV=1
Length = 467
Score = 47.4 bits (111), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
Query: 67 NHKEAEKRRRERINSHLNKLRSILSCNSKLDKASLLARVVQRVRELKEQTIELTEVE 123
NH EAE++RRE++N LR+++ SK+DKASLLA + + +++++ I + E E
Sbjct: 320 NHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLADAITYITDMQKK-IRVYETE 375
>sp|P13027|ARRS_MAIZE Anthocyanin regulatory R-S protein OS=Zea mays GN=R-S PE=2 SV=1
Length = 612
Score = 47.4 bits (111), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 45/71 (63%), Gaps = 3/71 (4%)
Query: 62 LAALKNHKEAEKRRRERINSHLNKLRSILSCNSKLDKASLLARVVQRVRELKEQTIELT- 120
++A KNH +E++RRE++N L+S+L +++KAS+LA + ++EL+ + EL
Sbjct: 413 MSATKNHVMSERKRREKLNEMFLVLKSLLPSIHRVNKASILAETIAYLKELQRRVQELES 472
Query: 121 --EVESFPSET 129
E S PSET
Sbjct: 473 SREPASRPSET 483
>sp|Q9LPW3|SCRM2_ARATH Transcription factor SCREAM2 OS=Arabidopsis thaliana GN=SCRM2 PE=1
SV=1
Length = 450
Score = 46.6 bits (109), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
Query: 71 AEKRRRERINSHLNKLRSILSCNSKLDKASLLARVVQRVRELKEQTIEL-TEVESFPSET 129
AE+RRR+++N L LRS++ SK+D+AS+L + ++EL ++ +L TE+ES P +
Sbjct: 271 AERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHTELESTPPSS 330
Query: 130 DEITVLASS 138
+ L +
Sbjct: 331 SSLHPLTPT 339
>sp|Q9CAD0|EGL1_ARATH Transcription factor EGL1 OS=Arabidopsis thaliana GN=BHLH2 PE=1
SV=1
Length = 596
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 40/64 (62%), Gaps = 5/64 (7%)
Query: 56 TPEDRALAALKNHKEAEKRRRERINSHLNKLRSILSCNSKLDKASLLARVVQRVRELKEQ 115
TPE+ NH +EK+RRE++N LRSI+ SK+DK S+L ++ +++L+++
Sbjct: 399 TPEETG-----NHALSEKKRREKLNERFMTLRSIIPSISKIDKVSILDDTIEYLQDLQKR 453
Query: 116 TIEL 119
EL
Sbjct: 454 VQEL 457
>sp|Q6YGZ5|BMAL1_TYTAL Aryl hydrocarbon receptor nuclear translocator-like protein 1
OS=Tyto alba GN=ARNTL PE=2 SV=1
Length = 633
Score = 45.8 bits (107), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 47/80 (58%), Gaps = 4/80 (5%)
Query: 52 LTETTPEDRALAALKNHKEAEKRRRERINSHLNKLRSIL-SCNS---KLDKASLLARVVQ 107
L T + R A + H + EKRRR+++NS +++L S++ +CN+ KLDK ++L VQ
Sbjct: 68 LEYTDQQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQ 127
Query: 108 RVRELKEQTIELTEVESFPS 127
++ L+ T TE P+
Sbjct: 128 HMKTLRGATNPYTEANYKPA 147
>sp|A0MLS5|BMAL1_HORSE Aryl hydrocarbon receptor nuclear translocator-like protein 1
OS=Equus caballus GN=ARNTL PE=2 SV=1
Length = 626
Score = 45.4 bits (106), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 45/74 (60%), Gaps = 4/74 (5%)
Query: 58 EDRALAALKNHKEAEKRRRERINSHLNKLRSIL-SCNS---KLDKASLLARVVQRVRELK 113
+ R A + H + EKRRR+++NS +++L S++ +CN+ KLDK ++L VQ ++ L+
Sbjct: 67 QGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLR 126
Query: 114 EQTIELTEVESFPS 127
T TE P+
Sbjct: 127 GATNPYTEANYKPT 140
>sp|Q8QGQ7|BMAL2_CHICK Aryl hydrocarbon receptor nuclear translocator-like protein 2
OS=Gallus gallus GN=ARNTL2 PE=1 SV=1
Length = 622
Score = 45.4 bits (106), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 50/89 (56%), Gaps = 8/89 (8%)
Query: 47 LEVSGLTETTPEDRALAALKNHKEA----EKRRRERINSHLNKLRSILS-CNS---KLDK 98
+EV G + ED +K+ +EA EKRRR+++N+ + +L +++ CN KLDK
Sbjct: 72 VEVDGDPQKRNEDEEHLKIKDFREAHSQTEKRRRDKMNNLIEELSAMIPQCNPMARKLDK 131
Query: 99 ASLLARVVQRVRELKEQTIELTEVESFPS 127
++L VQ ++ LK T TEV PS
Sbjct: 132 LTVLRMAVQHLKSLKGSTSSYTEVRYKPS 160
>sp|Q9WTL8|BMAL1_MOUSE Aryl hydrocarbon receptor nuclear translocator-like protein 1
OS=Mus musculus GN=Arntl PE=1 SV=2
Length = 632
Score = 45.4 bits (106), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 45/74 (60%), Gaps = 4/74 (5%)
Query: 58 EDRALAALKNHKEAEKRRRERINSHLNKLRSIL-SCNS---KLDKASLLARVVQRVRELK 113
+ R A + H + EKRRR+++NS +++L S++ +CN+ KLDK ++L VQ ++ L+
Sbjct: 74 QGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLR 133
Query: 114 EQTIELTEVESFPS 127
T TE P+
Sbjct: 134 GATNPYTEANYKPT 147
>sp|Q91YA9|BMAL1_NANGA Aryl hydrocarbon receptor nuclear translocator-like protein 1
OS=Nannospalax galili GN=Arntl PE=1 SV=1
Length = 626
Score = 45.4 bits (106), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 45/74 (60%), Gaps = 4/74 (5%)
Query: 58 EDRALAALKNHKEAEKRRRERINSHLNKLRSIL-SCNS---KLDKASLLARVVQRVRELK 113
+ R A + H + EKRRR+++NS +++L S++ +CN+ KLDK ++L VQ ++ L+
Sbjct: 67 QGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLR 126
Query: 114 EQTIELTEVESFPS 127
T TE P+
Sbjct: 127 GATNPYTEANYKPT 140
>sp|Q5R4T2|BMAL1_PONAB Aryl hydrocarbon receptor nuclear translocator-like protein 1
OS=Pongo abelii GN=ARNTL PE=2 SV=1
Length = 625
Score = 45.1 bits (105), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 45/74 (60%), Gaps = 4/74 (5%)
Query: 58 EDRALAALKNHKEAEKRRRERINSHLNKLRSIL-SCNS---KLDKASLLARVVQRVRELK 113
+ R A + H + EKRRR+++NS +++L S++ +CN+ KLDK ++L VQ ++ L+
Sbjct: 67 QGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLR 126
Query: 114 EQTIELTEVESFPS 127
T TE P+
Sbjct: 127 GATNPYTEANYKPT 140
>sp|Q9I8T7|BMAL1_CHICK Aryl hydrocarbon receptor nuclear translocator-like protein 1
OS=Gallus gallus GN=ARNTL PE=1 SV=1
Length = 633
Score = 45.1 bits (105), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 45/74 (60%), Gaps = 4/74 (5%)
Query: 58 EDRALAALKNHKEAEKRRRERINSHLNKLRSIL-SCNS---KLDKASLLARVVQRVRELK 113
+ R A + H + EKRRR+++NS +++L S++ +CN+ KLDK ++L VQ ++ L+
Sbjct: 74 QGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLR 133
Query: 114 EQTIELTEVESFPS 127
T TE P+
Sbjct: 134 GATNPYTEANYKPA 147
>sp|O88529|BMAL1_MESAU Aryl hydrocarbon receptor nuclear translocator-like protein 1
OS=Mesocricetus auratus GN=ARNTL PE=2 SV=1
Length = 626
Score = 45.1 bits (105), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 45/74 (60%), Gaps = 4/74 (5%)
Query: 58 EDRALAALKNHKEAEKRRRERINSHLNKLRSIL-SCNS---KLDKASLLARVVQRVRELK 113
+ R A + H + EKRRR+++NS +++L S++ +CN+ KLDK ++L VQ ++ L+
Sbjct: 67 QGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLR 126
Query: 114 EQTIELTEVESFPS 127
T TE P+
Sbjct: 127 GATNPYTEANYKPT 140
>sp|O00327|BMAL1_HUMAN Aryl hydrocarbon receptor nuclear translocator-like protein 1
OS=Homo sapiens GN=ARNTL PE=1 SV=2
Length = 626
Score = 45.1 bits (105), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 45/74 (60%), Gaps = 4/74 (5%)
Query: 58 EDRALAALKNHKEAEKRRRERINSHLNKLRSIL-SCNS---KLDKASLLARVVQRVRELK 113
+ R A + H + EKRRR+++NS +++L S++ +CN+ KLDK ++L VQ ++ L+
Sbjct: 67 QGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLR 126
Query: 114 EQTIELTEVESFPS 127
T TE P+
Sbjct: 127 GATNPYTEANYKPT 140
>sp|Q9EPW1|BMAL1_RAT Aryl hydrocarbon receptor nuclear translocator-like protein 1
OS=Rattus norvegicus GN=Arntl PE=2 SV=4
Length = 626
Score = 45.1 bits (105), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 45/74 (60%), Gaps = 4/74 (5%)
Query: 58 EDRALAALKNHKEAEKRRRERINSHLNKLRSIL-SCNS---KLDKASLLARVVQRVRELK 113
+ R A + H + EKRRR+++NS +++L S++ +CN+ KLDK ++L VQ ++ L+
Sbjct: 67 QGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLR 126
Query: 114 EQTIELTEVESFPS 127
T TE P+
Sbjct: 127 GATNPYTEANYKPT 140
>sp|P13526|ARLC_MAIZE Anthocyanin regulatory Lc protein OS=Zea mays GN=LC PE=2 SV=1
Length = 610
Score = 45.1 bits (105), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 42/67 (62%), Gaps = 3/67 (4%)
Query: 66 KNHKEAEKRRRERINSHLNKLRSILSCNSKLDKASLLARVVQRVRELKEQTIELT---EV 122
KNH +E++RRE++N L+S+L +++KAS+LA + ++EL+ + EL E
Sbjct: 415 KNHVMSERKRREKLNEMFLVLKSLLPSIHRVNKASILAETIAYLKELQRRVQELESSREP 474
Query: 123 ESFPSET 129
S PSET
Sbjct: 475 ASRPSET 481
>sp|Q9FT81|TT8_ARATH Transcription factor TT8 OS=Arabidopsis thaliana GN=TT8 PE=1 SV=2
Length = 518
Score = 45.1 bits (105), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 55/112 (49%), Gaps = 3/112 (2%)
Query: 67 NHKEAEKRRRERINSHLNKLRSILSCNSKLDKASLLARVVQRVRELKEQTIELTEVESFP 126
+H AE+RRRE++N LRS++ +K+DK S+L + V L+++ EL
Sbjct: 363 SHVVAERRRREKLNEKFITLRSMVPFVTKMDKVSILGDTIAYVNHLRKRVHELENTHHEQ 422
Query: 127 SETDEITVLASSDYSSDGTLIFKASLC---CEDRSDLLPDIIEILKSLHLKT 175
T + + ++I L CE R LL DI+++L L ++T
Sbjct: 423 QHKRTRTCKRKTSEEVEVSIIENDVLLEMRCEYRDGLLLDILQVLHELGIET 474
>sp|Q9LUK7|BH028_ARATH Transcription factor bHLH28 OS=Arabidopsis thaliana GN=BHLH28 PE=2
SV=1
Length = 511
Score = 44.3 bits (103), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 31/50 (62%)
Query: 67 NHKEAEKRRRERINSHLNKLRSILSCNSKLDKASLLARVVQRVRELKEQT 116
NH EAE+ RRE++N LR+++ SK+DK SLL V + ELK +
Sbjct: 343 NHVEAERMRREKLNHRFYALRAVVPNVSKMDKTSLLEDAVCYINELKSKA 392
>sp|Q9LSE2|ICE1_ARATH Transcription factor ICE1 OS=Arabidopsis thaliana GN=SCRM PE=1 SV=1
Length = 494
Score = 44.3 bits (103), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
Query: 71 AEKRRRERINSHLNKLRSILSCNSKLDKASLLARVVQRVRELKEQTIEL-TEVESFP 126
AE+RRR+++N L LRS++ SK+D+AS+L + ++EL ++ +L E+ES P
Sbjct: 311 AERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELESTP 367
>sp|Q8GZ38|UNE10_ARATH Transcription factor UNE10 OS=Arabidopsis thaliana GN=UNE10 PE=2
SV=1
Length = 399
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 35/48 (72%)
Query: 68 HKEAEKRRRERINSHLNKLRSILSCNSKLDKASLLARVVQRVRELKEQ 115
H ++E++RR++IN + L+ ++ +SK DKAS+L V++ +++L+ Q
Sbjct: 218 HNQSERKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQ 265
>sp|Q9FUA4|SPT_ARATH Transcription factor SPATULA OS=Arabidopsis thaliana GN=SPT PE=1
SV=1
Length = 373
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 37/57 (64%)
Query: 64 ALKNHKEAEKRRRERINSHLNKLRSILSCNSKLDKASLLARVVQRVRELKEQTIELT 120
A + H +EKRRR RIN + L+S++ ++K DKAS+L ++ +++L+ Q LT
Sbjct: 198 AAEVHNLSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLT 254
>sp|Q700E3|BH027_ARATH Transcription factor bHLH27 OS=Arabidopsis thaliana GN=BHLH27 PE=2
SV=1
Length = 263
Score = 42.4 bits (98), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 55/89 (61%), Gaps = 8/89 (8%)
Query: 44 SFPLE--VSGLTETTPEDRALAALKNHKE--AEKRRRERINSHLNKLRSILSCNSKLDKA 99
S+P+E SG E++ D A + + K +E+ RR+++N L LRS++ SKLDKA
Sbjct: 27 SWPMEEAFSGSGESSSPDGAATSPASSKNVVSERNRRQKLNQRLFALRSVVPNISKLDKA 86
Query: 100 SLLARVVQRVREL--KEQTI--ELTEVES 124
S++ + ++EL +E+T+ E+ E+ES
Sbjct: 87 SVIKDSIDYMQELIDQEKTLEAEIRELES 115
>sp|O61734|CYCL_DROME Protein cycle OS=Drosophila melanogaster GN=cyc PE=2 SV=2
Length = 413
Score = 42.4 bits (98), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 36/52 (69%), Gaps = 4/52 (7%)
Query: 66 KNHKEAEKRRRERINSHLNKLRSIL----SCNSKLDKASLLARVVQRVRELK 113
+NH E EKRRR+++N+++N+L S++ + KLDK ++L VQ +R ++
Sbjct: 33 QNHSEIEKRRRDKMNTYINELSSMIPMCFAMQRKLDKLTVLRMAVQHLRGIR 84
>sp|Q9LEZ3|BIM1_ARATH Transcription factor BIM1 OS=Arabidopsis thaliana GN=BIM1 PE=1 SV=2
Length = 529
Score = 42.4 bits (98), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 47/86 (54%), Gaps = 2/86 (2%)
Query: 32 MMQQSFCSSSSYSFPLEVSGLTETTPEDRALAALKN-HKEAEKRRRERINSHLNKLRSIL 90
M ++S +S S+ L V +P D+ L ++ H E+RRR +IN LR ++
Sbjct: 244 MKKESSSTSQSHRVDLRVKADVRGSPNDQKLNTPRSKHSATEQRRRSKINDRFQMLRQLI 303
Query: 91 -SCNSKLDKASLLARVVQRVRELKEQ 115
+ + K DKAS L V++ ++ L+E+
Sbjct: 304 PNSDQKRDKASFLLEVIEYIQFLQEK 329
>sp|Q9FN69|GL3_ARATH Transcription factor GLABRA 3 OS=Arabidopsis thaliana GN=GL3 PE=1
SV=1
Length = 637
Score = 42.0 bits (97), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 47/100 (47%), Gaps = 14/100 (14%)
Query: 56 TPEDRALAALKNHKEAEKRRRERINSHLNKLRSILSCNSKLDKASLLARVVQRVRELKEQ 115
+PE R NH EK+RRE++N LR I+ +K+DK S+L ++ ++EL+ +
Sbjct: 432 SPEARDETG--NHAVLEKKRREKLNERFMTLRKIIPSINKIDKVSILDDTIEYLQELERR 489
Query: 116 TIELTEVESFPSETDEITVLASSDYSSDGTLIFKASLCCE 155
EL S+D + GT+ K C+
Sbjct: 490 VQELESCRE------------STDTETRGTMTMKRKKPCD 517
>sp|Q9SVU6|BH023_ARATH Transcription factor bHLH23 OS=Arabidopsis thaliana GN=BHLH23 PE=2
SV=1
Length = 413
Score = 40.8 bits (94), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Query: 54 ETTPEDRALAALKNHKEAEKRRRERINSHLNKLRSILSCNSKLDKASLLARVVQRVRELK 113
++T R+ AA+ HK +E+RRR++IN + L+ +L +K D++S+L V++ V+ L+
Sbjct: 269 DSTSSKRSRAAIM-HKLSERRRRQKINEMMKALQELLPRCTKTDRSSMLDDVIEYVKSLQ 327
Query: 114 EQ 115
Q
Sbjct: 328 SQ 329
>sp|Q2VPD4|BMAL2_MOUSE Aryl hydrocarbon receptor nuclear translocator-like protein 2
OS=Mus musculus GN=Arntl2 PE=2 SV=2
Length = 579
Score = 40.4 bits (93), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 33/53 (62%), Gaps = 4/53 (7%)
Query: 68 HKEAEKRRRERINSHLNKLRSILSCN----SKLDKASLLARVVQRVRELKEQT 116
H + EKRRR+++N + KL S++ + KLDK S+L R VQ +R L+ T
Sbjct: 53 HSQMEKRRRDKMNHLIQKLSSMIPPHIPTAHKLDKLSVLRRAVQYLRSLRGMT 105
>sp|Q8S3F1|BH020_ARATH Transcription factor NAI1 OS=Arabidopsis thaliana GN=NAI1 PE=2 SV=1
Length = 320
Score = 40.0 bits (92), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 42/72 (58%)
Query: 65 LKNHKEAEKRRRERINSHLNKLRSILSCNSKLDKASLLARVVQRVRELKEQTIELTEVES 124
LK H AE++RR+++N L L ++L K DKA++L ++ +++L+E+ +L E
Sbjct: 130 LKEHVLAERKRRQKLNERLIALSALLPGLKKTDKATVLEDAIKHLKQLQERVKKLEEERV 189
Query: 125 FPSETDEITVLA 136
+ D+ +L
Sbjct: 190 VTKKMDQSIILV 201
>sp|Q9T072|BH025_ARATH Transcription factor bHLH25 OS=Arabidopsis thaliana GN=BHLH25 PE=2
SV=2
Length = 328
Score = 40.0 bits (92), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 57/116 (49%), Gaps = 4/116 (3%)
Query: 51 GLTETTPEDRALAALKNHKEAEKRRRERINSHLNKLRSILSCNSKLDKASLLARVVQRVR 110
G P R + ++H AE++RRE++ L +++ K+DKAS+L ++ ++
Sbjct: 136 GTKRAQPFSRNQSNAQDHIIAERKRREKLTQRFVALSALVPGLKKMDKASVLGDALKHIK 195
Query: 111 ELKEQTIELTEVESFPSETDEITVLASSDYSSDGTLIFKASLCCEDR-SDL-LPDI 164
L+E+ EL E + + V S D F +S CED SDL LP+I
Sbjct: 196 YLQERVGELEEQKKERRLESMVLVKKSKLILDDNNQSFSSS--CEDGFSDLDLPEI 249
>sp|Q0V7X4|FIT_ARATH Transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION
FACTOR OS=Arabidopsis thaliana GN=FIT PE=1 SV=1
Length = 318
Score = 39.7 bits (91), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 32/49 (65%)
Query: 71 AEKRRRERINSHLNKLRSILSCNSKLDKASLLARVVQRVRELKEQTIEL 119
+E+RRR R+ L LRS++ +K+DKAS++ V V+EL+ Q +L
Sbjct: 135 SERRRRGRMKDKLYALRSLVPNITKMDKASIVGDAVLYVQELQSQAKKL 183
>sp|Q10186|YAWC_SCHPO Uncharacterized bHLH domain-containing protein C3F10.12c
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPAC3F10.12c PE=4 SV=1
Length = 201
Score = 38.9 bits (89), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 54/115 (46%), Gaps = 9/115 (7%)
Query: 5 NSELYRFLAQNGVGYYGFPGSACEFSSMMQQSFCSSSSYSFPLEVSGLTE-----TTPED 59
N +Y + V Y +P +F +++ +S + + SG T E+
Sbjct: 28 NDIVYNDFYAHAVSYNPYPSEKIDFP---KKNTAHKNSTTSTVASSGNTTMEKPCVGSEE 84
Query: 60 RALAALKNHKEAEKRRRERINSHLNKLRSILSCNSKLDKASLLARVVQRVRELKE 114
A +HKE E+RRRE I+ + +L +I+ K +K S+L R Q +R LKE
Sbjct: 85 WYKAKRLSHKEVERRRREAISEGIKELANIVPGCEK-NKGSILQRTAQYIRSLKE 138
>sp|Q9M128|BH057_ARATH Transcription factor bHLH57 OS=Arabidopsis thaliana GN=BHLH57 PE=2
SV=1
Length = 315
Score = 38.5 bits (88), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
Query: 68 HKEAEKRRRERINSHLNKLRSIL--SCNSKLDKASLLARVVQRVRELKEQTIELTEVESF 125
H E+ RR ++N HLN LRS++ S + D+AS++ + ++EL EQ ++ E E
Sbjct: 117 HIAVERNRRRQMNEHLNSLRSLMPPSFLQRGDQASIVGGAIDFIKEL-EQLLQSLEAEKR 175
Query: 126 PSETDE 131
TDE
Sbjct: 176 KDGTDE 181
>sp|O80536|PIF3_ARATH Transcription factor PIF3 OS=Arabidopsis thaliana GN=PIF3 PE=1 SV=1
Length = 524
Score = 38.5 bits (88), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 39/70 (55%), Gaps = 5/70 (7%)
Query: 51 GLTETTPEDRALAALKN-----HKEAEKRRRERINSHLNKLRSILSCNSKLDKASLLARV 105
G E P L + ++ H +E+RRR+RIN + L+ ++ +K+DKAS+L
Sbjct: 326 GRKEAGPSRTGLGSKRSRSAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEA 385
Query: 106 VQRVRELKEQ 115
++ ++ L+ Q
Sbjct: 386 IEYLKSLQLQ 395
>sp|Q9NQ87|HEYL_HUMAN Hairy/enhancer-of-split related with YRPW motif-like protein
OS=Homo sapiens GN=HEYL PE=2 SV=2
Length = 328
Score = 38.5 bits (88), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 7/65 (10%)
Query: 55 TTPEDRALAALKNHKEA-EKRRRERINSHLNKLRSILSC------NSKLDKASLLARVVQ 107
+TP + A K H+ EKRRR+RINS L++LR ++ +SKL+KA +L V
Sbjct: 34 STPSSSQMQARKKHRGIIEKRRRDRINSSLSELRRLVPTAFEKQGSSKLEKAEVLQMTVD 93
Query: 108 RVREL 112
++ L
Sbjct: 94 HLKML 98
>sp|Q700C7|SPCH_ARATH Transcription factor SPEECHLESS OS=Arabidopsis thaliana GN=SPCH
PE=1 SV=1
Length = 364
Score = 38.5 bits (88), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 33/50 (66%), Gaps = 2/50 (4%)
Query: 67 NHKEAEKRRRERINSHLNKLRSILSC--NSKLDKASLLARVVQRVRELKE 114
+H E+ RR+++N HL LRS++ C + D+AS++ VV+ + EL++
Sbjct: 103 SHVTVERNRRKQMNEHLTVLRSLMPCFYVKRGDQASIIGGVVEYISELQQ 152
>sp|O08785|CLOCK_MOUSE Circadian locomoter output cycles protein kaput OS=Mus musculus
GN=Clock PE=1 SV=1
Length = 855
Score = 38.5 bits (88), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 44/69 (63%), Gaps = 3/69 (4%)
Query: 51 GLTETTPEDRALAALKNHKEAEKRRRERINSHLNKLRSILSCNS-KLDKASLLARVVQRV 109
GL E +D+A +N ++EK+RR++ N + +L S+L N+ K+DK+++L + + +
Sbjct: 24 GLVEEDDKDKAKRVSRN--KSEKKRRDQFNVLIKELGSMLPGNARKMDKSTVLQKSIDFL 81
Query: 110 RELKEQTIE 118
R+ KE T +
Sbjct: 82 RKHKETTAQ 90
>sp|P49379|CBF1_KLULA Centromere-binding protein 1 OS=Kluyveromyces lactis (strain ATCC
8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 /
WM37) GN=CBF1 PE=3 SV=2
Length = 359
Score = 38.5 bits (88), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 36/58 (62%), Gaps = 3/58 (5%)
Query: 68 HKEAEKRRRERINSHLNKLRSILSCNSKLDKASLLARVVQRVRELKEQTIELTEVESF 125
HKE E+RRR+ IN+ + KL +L + KA++L+R + ++++KE E +E +
Sbjct: 254 HKEVERRRRQNINTAIEKLSDLLPV-KETSKAAILSRAAEYIQKMKE--TETANIEKW 308
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.129 0.350
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 76,672,010
Number of Sequences: 539616
Number of extensions: 2752164
Number of successful extensions: 12109
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 87
Number of HSP's successfully gapped in prelim test: 180
Number of HSP's that attempted gapping in prelim test: 11951
Number of HSP's gapped (non-prelim): 288
length of query: 238
length of database: 191,569,459
effective HSP length: 114
effective length of query: 124
effective length of database: 130,053,235
effective search space: 16126601140
effective search space used: 16126601140
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 59 (27.3 bits)