BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026480
(238 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q32L65|MARH2_BOVIN E3 ubiquitin-protein ligase MARCH2 OS=Bos taurus GN=MARCH2 PE=2
SV=1
Length = 245
Score = 52.0 bits (123), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Query: 14 NPETTSHCRICHEEEFESCNSLEAPCACSGTVKFAHRDCIQRWCYEKGNTTCEICLQEY 72
P CRICHE + SL +PC CSGT+ H+ C++RW + CE+C E+
Sbjct: 57 TPSDGPFCRICHEGA--NGESLLSPCGCSGTLGAVHKSCLERWLSSSNTSYCELCHTEF 113
>sp|Q9H992|MARH7_HUMAN E3 ubiquitin-protein ligase MARCH7 OS=Homo sapiens GN=MARCH7 PE=1
SV=1
Length = 704
Score = 52.0 bits (123), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 8/59 (13%)
Query: 21 CRICHEEEFESCNSLEAPCACSGTVKFAHRDCIQRWCYEKGN--------TTCEICLQE 71
CRIC S N L PC C+G++++ H+DC+++W K N TTCE+C ++
Sbjct: 552 CRICQMAAASSSNLLIEPCKCTGSLQYVHQDCMKKWLQAKINSGSSLEAVTTCELCKEK 610
>sp|Q5R9W2|MARH7_PONAB E3 ubiquitin-protein ligase MARCH7 OS=Pongo abelii GN=MARCH7 PE=2
SV=1
Length = 707
Score = 52.0 bits (123), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 8/59 (13%)
Query: 21 CRICHEEEFESCNSLEAPCACSGTVKFAHRDCIQRWCYEKGN--------TTCEICLQE 71
CRIC S N L PC C+G++++ H+DC+++W K N TTCE+C ++
Sbjct: 552 CRICQMAAASSSNLLIEPCKCTGSLQYVHQDCMKKWLQAKINSGSSLEAVTTCELCKEK 610
>sp|Q3TZ87|MARH9_MOUSE E3 ubiquitin-protein ligase MARCH9 OS=Mus musculus GN=March9 PE=2
SV=1
Length = 348
Score = 50.8 bits (120), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Query: 18 TSHCRICHEEEFESCNSLEAPCACSGTVKFAHRDCIQRWCYEKGNTTCEICLQEYGPGYT 77
T CRIC + + L +PC C G+V+ H+ C+ RW E+G+ +CE+C +Y
Sbjct: 107 TPQCRICFQGPEQ--GELLSPCRCDGSVRCTHQPCLIRWISERGSWSCELCYFKYQVLAI 164
Query: 78 APSKKSQLIEAAVTIRDSLQI 98
+ Q ++T+ + +QI
Sbjct: 165 STKNPLQWQAISLTVIEKVQI 185
>sp|Q86YJ5|MARH9_HUMAN E3 ubiquitin-protein ligase MARCH9 OS=Homo sapiens GN=MARCH9 PE=1
SV=2
Length = 346
Score = 50.4 bits (119), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Query: 18 TSHCRICHEEEFESCNSLEAPCACSGTVKFAHRDCIQRWCYEKGNTTCEICLQEYGPGYT 77
T CRIC + + L +PC C G+V+ H+ C+ RW E+G+ +CE+C +Y
Sbjct: 107 TPQCRICFQGPEQ--GELLSPCRCDGSVRCTHQPCLIRWISERGSWSCELCYFKYQVLAI 164
Query: 78 APSKKSQLIEAAVTIRDSLQI 98
+ Q ++T+ + +QI
Sbjct: 165 STKNPLQWQAISLTVIEKVQI 185
>sp|Q9P0N8|MARH2_HUMAN E3 ubiquitin-protein ligase MARCH2 OS=Homo sapiens GN=MARCH2 PE=1
SV=1
Length = 246
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 14 NPETTSHCRICHEEEFESCNSLEAPCACSGTVKFAHRDCIQRWCYEKGNTTCEICLQEY 72
P CRICHE C L +PC C+GT+ H+ C+++W + CE+C E+
Sbjct: 57 TPSDGPFCRICHEGANGEC--LLSPCGCTGTLGAVHKSCLEKWLSSSNTSYCELCHTEF 113
>sp|Q0P496|MARH4_DANRE E3 ubiquitin-protein ligase MARCH4 OS=Danio rerio GN=march4 PE=2
SV=1
Length = 421
Score = 50.1 bits (118), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Query: 18 TSHCRICHEEEFESCNSLEAPCACSGTVKFAHRDCIQRWCYEKGNTTCEICLQEYGPGYT 77
T CRIC + + L +PC CSG+V+ H C+ +W E+G+ +CE+C +Y
Sbjct: 140 TPLCRICFQGPEQ--GELLSPCRCSGSVRCTHEPCLIKWISERGSWSCELCYYKYQVIAI 197
Query: 78 APSKKSQLIEAAVTIRDSLQI 98
+ Q ++T+ + +QI
Sbjct: 198 STKNPLQWQAISLTVIEKVQI 218
>sp|Q1LVZ2|MARH2_DANRE E3 ubiquitin-protein ligase MARCH2 OS=Danio rerio GN=march2 PE=2
SV=1
Length = 249
Score = 50.1 bits (118), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Query: 21 CRICHEEEFESCNS--LEAPCACSGTVKFAHRDCIQRWCYEKGNTTCEICLQEY 72
CRICHE + + CNS L +PC C+GT+ H+ C+++W + CE+C E+
Sbjct: 64 CRICHEGQ-DVCNSEGLLSPCDCTGTLGTVHKSCLEKWLSSSNTSYCELCHTEF 116
>sp|Q5XI50|MARH7_RAT E3 ubiquitin-protein ligase MARCH7 OS=Rattus norvegicus GN=March7
PE=2 SV=1
Length = 692
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 8/59 (13%)
Query: 21 CRICHEEEFESCNSLEAPCACSGTVKFAHRDCIQRWCYEKGN--------TTCEICLQE 71
CRIC S N L PC C+G++++ H++C+++W K N TTCE+C ++
Sbjct: 553 CRICQMAAASSSNLLIEPCKCTGSLQYVHQECMKKWLQAKINSGSSLEAVTTCELCKEK 611
>sp|Q9WV66|MARH7_MOUSE E3 ubiquitin-protein ligase MARCH7 OS=Mus musculus GN=March7 PE=2
SV=1
Length = 693
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 8/59 (13%)
Query: 21 CRICHEEEFESCNSLEAPCACSGTVKFAHRDCIQRWCYEKGN--------TTCEICLQE 71
CRIC S N L PC C+G++++ H++C+++W K N TTCE+C ++
Sbjct: 554 CRICQMAAASSSNLLIEPCKCTGSLQYVHQECMKKWLQAKINSGSSLEAVTTCELCKEK 612
>sp|Q8TCQ1|MARH1_HUMAN E3 ubiquitin-protein ligase MARCH1 OS=Homo sapiens GN=MARCH1 PE=1
SV=1
Length = 289
Score = 48.5 bits (114), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 15 PETTSHCRICHEEEFESCNSLEAPCACSGTVKFAHRDCIQRWCYEKGNTTCEICLQEY 72
P T CRICH E E + L PC C+GT++F H+ C+ +W CE+C ++
Sbjct: 74 PSTQDICRICHCEGDEE-SPLITPCRCTGTLRFVHQSCLHQWIKSSDTRCCELCKYDF 130
>sp|Q5R9W1|MARH6_PONAB E3 ubiquitin-protein ligase MARCH6 OS=Pongo abelii GN=MARCH6 PE=2
SV=1
Length = 910
Score = 48.5 bits (114), Expect = 4e-05, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Query: 21 CRICHEEEFESCNSLEAPCACSGTVKFAHRDCIQRWCYEKGNTTCEICLQEYG--PGYTA 78
CR+C E L PC C+G++KF H++C+ +W CE+C + P Y+
Sbjct: 9 CRVCRSEGTPE-KPLYHPCVCTGSIKFIHQECLVQWLKHSRKEYCELCKHRFAFTPIYS- 66
Query: 79 PSKKSQL 85
P S+L
Sbjct: 67 PDMPSRL 73
>sp|Q6ZQ89|MARH6_MOUSE E3 ubiquitin-protein ligase MARCH6 OS=Mus musculus GN=March6 PE=2
SV=2
Length = 909
Score = 48.5 bits (114), Expect = 4e-05, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Query: 21 CRICHEEEFESCNSLEAPCACSGTVKFAHRDCIQRWCYEKGNTTCEICLQEYG--PGYTA 78
CR+C E L PC C+G++KF H++C+ +W CE+C + P Y+
Sbjct: 9 CRVCRSEGTPE-KPLYHPCVCTGSIKFIHQECLVQWLKHSRKEYCELCKHRFAFTPIYS- 66
Query: 79 PSKKSQL 85
P S+L
Sbjct: 67 PDMPSRL 73
>sp|O60337|MARH6_HUMAN E3 ubiquitin-protein ligase MARCH6 OS=Homo sapiens GN=MARCH6 PE=1
SV=2
Length = 910
Score = 48.5 bits (114), Expect = 4e-05, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Query: 21 CRICHEEEFESCNSLEAPCACSGTVKFAHRDCIQRWCYEKGNTTCEICLQEYG--PGYTA 78
CR+C E L PC C+G++KF H++C+ +W CE+C + P Y+
Sbjct: 9 CRVCRSEGTPE-KPLYHPCVCTGSIKFIHQECLVQWLKHSRKEYCELCKHRFAFTPIYS- 66
Query: 79 PSKKSQL 85
P S+L
Sbjct: 67 PDMPSRL 73
>sp|Q6NZQ8|MARH1_MOUSE E3 ubiquitin-protein ligase MARCH1 OS=Mus musculus GN=March1 PE=1
SV=2
Length = 289
Score = 48.5 bits (114), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 15 PETTSHCRICHEEEFESCNSLEAPCACSGTVKFAHRDCIQRWCYEKGNTTCEICLQEY 72
P T CRICH E E + L PC C+GT++F H+ C+ +W CE+C ++
Sbjct: 74 PSTQDICRICHCEGDEE-SPLITPCRCTGTLRFVHQSCLHQWIKSSDTRCCELCKYDF 130
>sp|A6P320|MARHB_RAT E3 ubiquitin-protein ligase MARCH11 OS=Rattus norvegicus GN=March11
PE=1 SV=1
Length = 398
Score = 48.5 bits (114), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 21 CRICHE--EEFESCNSLEAPCACSGTVKFAHRDCIQRWCYEKGNTTCEICLQEYGPGYTA 78
C+IC + E+ E N PC C G+V++ H+ C+ +W E+G+ TCE+C Y
Sbjct: 166 CKICFQGAEQGELLN----PCRCDGSVRYTHQLCLLKWISERGSWTCELCCYRYHVTAIK 221
Query: 79 PSKKSQLIEAAVTIRDSLQI 98
+ Q ++T+ + +Q+
Sbjct: 222 MKQPCQWQSISITLVEKVQM 241
>sp|Q8CBH7|MARHB_MOUSE E3 ubiquitin-protein ligase MARCH11 OS=Mus musculus GN=March11 PE=2
SV=2
Length = 400
Score = 48.5 bits (114), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 21 CRICHE--EEFESCNSLEAPCACSGTVKFAHRDCIQRWCYEKGNTTCEICLQEYGPGYTA 78
C+IC + E+ E N PC C G+V++ H+ C+ +W E+G+ TCE+C Y
Sbjct: 168 CKICFQGAEQGELLN----PCRCDGSVRYTHQLCLLKWISERGSWTCELCCYRYHVTAIK 223
Query: 79 PSKKSQLIEAAVTIRDSLQI 98
+ Q ++T+ + +Q+
Sbjct: 224 MKQPCQWQSISITLVEKVQM 243
>sp|Q5I0I2|MARH2_RAT E3 ubiquitin-protein ligase MARCH2 OS=Rattus norvegicus GN=March2
PE=1 SV=1
Length = 246
Score = 48.1 bits (113), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Query: 14 NPETTSHCRICHEEEFESCNSLEAPCACSGTVKFAHRDCIQRWCYEKGNTTCEICLQEYG 73
P CRICHE + +L +PC C+GT+ H+ C+++W + CE+C E+
Sbjct: 57 TPSDCPFCRICHEGA--NGENLLSPCGCTGTLGAVHKSCLEKWLSSSNTSYCELCHTEFA 114
>sp|Q80TE3|MARH4_MOUSE E3 ubiquitin-protein ligase MARCH4 OS=Mus musculus GN=March4 PE=2
SV=3
Length = 409
Score = 47.8 bits (112), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 18 TSHCRICHEEEFESCNSLEAPCACSGTVKFAHRDCIQRWCYEKGNTTCEICLQEYGPGYT 77
T CRIC + + L +PC C G+VK H+ C+ +W E+G +CE+C +Y
Sbjct: 159 TPLCRICFQGPEQ--GELLSPCRCDGSVKCTHQPCLIKWISERGCWSCELCYYKYHVIAI 216
Query: 78 APSKKSQLIEAAVTIRDSLQI 98
+ Q ++T+ + +QI
Sbjct: 217 STKNPLQWQAISLTVIEKVQI 237
>sp|Q9P2E8|MARH4_HUMAN E3 ubiquitin-protein ligase MARCH4 OS=Homo sapiens GN=MARCH4 PE=2
SV=2
Length = 410
Score = 47.4 bits (111), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 4/75 (5%)
Query: 18 TSHCRICHEEEFESCNSLEAPCACSGTVKFAHRDCIQRWCYEKGNTTCEICLQEYGPGYT 77
T CRIC + + L +PC C G+VK H+ C+ +W E+G +CE+C +Y
Sbjct: 160 TPLCRICFQGPEQ--GELLSPCRCDGSVKCTHQPCLIKWISERGCWSCELCYYKY--HVI 215
Query: 78 APSKKSQLIEAAVTI 92
A S K+ L A+++
Sbjct: 216 AISTKNPLQWQAISL 230
>sp|A6NNE9|MARHB_HUMAN E3 ubiquitin-protein ligase MARCH11 OS=Homo sapiens GN=MARCH11 PE=2
SV=3
Length = 402
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 21 CRICHE--EEFESCNSLEAPCACSGTVKFAHRDCIQRWCYEKGNTTCEICLQEYGPGYTA 78
C+IC + E+ E N PC C G+V++ H+ C+ +W E+G+ TCE+C Y
Sbjct: 170 CKICFQGAEQGELLN----PCRCDGSVRYTHQLCLLKWISERGSWTCELCCYRYHVIAIK 225
Query: 79 PSKKSQLIEAAVTIRDSLQI 98
+ Q ++T+ + +Q+
Sbjct: 226 MKQPCQWQSISITLVEKVQM 245
>sp|Q99M02|MARH2_MOUSE E3 ubiquitin-protein ligase MARCH2 OS=Mus musculus GN=March2 PE=2
SV=1
Length = 246
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Query: 21 CRICHEEEFESCNSLEAPCACSGTVKFAHRDCIQRWCYEKGNTTCEICLQEYG 73
CRICHE + +L +PC C+GT+ H+ C+++W + CE+C E+
Sbjct: 64 CRICHEGA--NGENLLSPCGCTGTLGAVHKSCLEKWLSSSNTSYCELCHTEFA 114
>sp|P40318|DOA10_YEAST ERAD-associated E3 ubiquitin-protein ligase DOA10
OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=SSM4 PE=1 SV=1
Length = 1319
Score = 46.6 bits (109), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 30/66 (45%), Gaps = 9/66 (13%)
Query: 11 FKSNPETTSHCRICHEEEFESCNSLEAPCACSGTVKFAHRDCIQRWCYEK--------GN 62
F + + + CRIC E E N L PC C G++K+ H C+ W K +
Sbjct: 29 FNDDAPSGATCRICRGEATED-NPLFHPCKCRGSIKYMHESCLLEWVASKNIDISKPGAD 87
Query: 63 TTCEIC 68
C+IC
Sbjct: 88 VKCDIC 93
>sp|Q5XIV2|MARHA_RAT Probable E3 ubiquitin-protein ligase MARCH10 OS=Rattus norvegicus
GN=March10 PE=2 SV=1
Length = 790
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 8/58 (13%)
Query: 21 CRICHEEEFESCNSLEAPCACSGTVKFAHRDCIQRWCYEKGNT--------TCEICLQ 70
CRIC N L PC C G+++F H++C+++W K + TCE+C Q
Sbjct: 641 CRICQIAGGSPANPLLEPCGCVGSLQFVHQECLKKWLKVKITSGADLSTVKTCEMCKQ 698
>sp|Q68FA7|MARH3_XENTR E3 ubiquitin-protein ligase MARCH3 OS=Xenopus tropicalis GN=march3
PE=2 SV=1
Length = 251
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 31/63 (49%), Gaps = 6/63 (9%)
Query: 6 LFVEDFKSNPETTSHCRICHEEEFESCNSLEAPCACSGTVKFAHRDCIQRWCYEKGNTTC 65
L + F P CRICHE + L +PC C+GT+ HR C++ W + C
Sbjct: 58 LTTQSFNDRPM----CRICHEGSTQ--EDLLSPCECTGTLGTIHRSCLEHWLSSSNTSYC 111
Query: 66 EIC 68
E+C
Sbjct: 112 ELC 114
>sp|Q86UD3|MARH3_HUMAN E3 ubiquitin-protein ligase MARCH3 OS=Homo sapiens GN=MARCH3 PE=2
SV=1
Length = 253
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Query: 21 CRICHEEEFESCNSLEAPCACSGTVKFAHRDCIQRWCYEKGNTTCEIC 68
CRICHE S L +PC C+GT+ HR C++ W + CE+C
Sbjct: 71 CRICHEGS--SQEDLLSPCECTGTLGTIHRSCLEHWLSSSNTSYCELC 116
>sp|Q5XIE5|MARH3_RAT E3 ubiquitin-protein ligase MARCH3 OS=Rattus norvegicus GN=March3
PE=1 SV=1
Length = 253
Score = 45.8 bits (107), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Query: 21 CRICHEEEFESCNSLEAPCACSGTVKFAHRDCIQRWCYEKGNTTCEIC 68
CRICHE S L +PC C+GT+ HR C++ W + CE+C
Sbjct: 71 CRICHEGS--SQEDLLSPCECTGTLGTIHRSCLEHWLSSSNTSYCELC 116
>sp|A0JN69|MARH3_BOVIN E3 ubiquitin-protein ligase MARCH3 OS=Bos taurus GN=MARCH3 PE=2
SV=1
Length = 253
Score = 45.8 bits (107), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Query: 21 CRICHEEEFESCNSLEAPCACSGTVKFAHRDCIQRWCYEKGNTTCEIC 68
CRICHE S L +PC C+GT+ HR C++ W + CE+C
Sbjct: 71 CRICHEGS--SQEDLLSPCECTGTLGTIHRSCLEHWLSSSNTSYCELC 116
>sp|Q0IH10|MARH3_XENLA E3 ubiquitin-protein ligase MARCH3 OS=Xenopus laevis GN=march3 PE=2
SV=1
Length = 252
Score = 45.8 bits (107), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Query: 21 CRICHEEEFESCNSLEAPCACSGTVKFAHRDCIQRWCYEKGNTTCEIC 68
CRICHE + L +PC C+GT+ HR C++ W + CE+C
Sbjct: 70 CRICHEGSTQ--EDLLSPCECTGTLGTIHRSCLEHWLSSSNTSYCELC 115
>sp|Q0VD59|MARH8_BOVIN E3 ubiquitin-protein ligase MARCH8 OS=Bos taurus GN=MARCH8 PE=2
SV=1
Length = 289
Score = 45.4 bits (106), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 15 PETTSHCRICHEEEFESCNSLEAPCACSGTVKFAHRDCIQRWCYEKGNTTCEICLQEY 72
P CRICH E + + L PC C+G++ F H+ C+Q+W CE+C E+
Sbjct: 72 PSNQDICRICHCEGDDE-SPLITPCRCTGSLHFVHQTCLQQWIKSSDTRCCELCKYEF 128
>sp|Q8BRX9|MARH3_MOUSE E3 ubiquitin-protein ligase MARCH3 OS=Mus musculus GN=March3 PE=2
SV=1
Length = 218
Score = 45.4 bits (106), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Query: 21 CRICHEEEFESCNSLEAPCACSGTVKFAHRDCIQRWCYEKGNTTCEIC 68
CRICHE S L +PC C+GT+ HR C++ W + CE+C
Sbjct: 71 CRICHEGS--SQEDLLSPCECTGTLGTIHRSCLEHWLSSSNTSYCELC 116
>sp|Q9DBD2|MARH8_MOUSE E3 ubiquitin-protein ligase MARCH8 OS=Mus musculus GN=March8 PE=2
SV=1
Length = 286
Score = 45.4 bits (106), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Query: 14 NPETTSHCRICH-EEEFESCNSLEAPCACSGTVKFAHRDCIQRWCYEKGNTTCEICLQEY 72
P CRICH E + ES L PC C+G++ F H+ C+Q+W CE+C E+
Sbjct: 69 TPSNQDICRICHCEGDDES--PLITPCHCTGSLHFVHQACLQQWIKSSDTRCCELCKYEF 126
>sp|Q5PQ35|MARH2_XENLA E3 ubiquitin-protein ligase MARCH2 OS=Xenopus laevis GN=march2 PE=2
SV=1
Length = 246
Score = 45.4 bits (106), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 21 CRICHEEEFESCNSLEAPCACSGTVKFAHRDCIQRWCYEKGNTTCEICLQEYG 73
CRICHE + L +PC C+GT+ H+ C+++W + CE+C E+
Sbjct: 64 CRICHEGG--NGERLLSPCDCTGTLGTVHKTCLEKWLSSSNTSYCELCHTEFA 114
>sp|Q5T0T0|MARH8_HUMAN E3 ubiquitin-protein ligase MARCH8 OS=Homo sapiens GN=MARCH8 PE=1
SV=1
Length = 291
Score = 45.4 bits (106), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 14 NPETTSHCRICHEEEFESCNSLEAPCACSGTVKFAHRDCIQRWCYEKGNTTCEICLQEY 72
P + CRICH E + + L PC C+G++ F H+ C+Q+W CE+C E+
Sbjct: 73 TPSSQDICRICHCEGDDE-SPLITPCHCTGSLHFVHQACLQQWIKSSDTRCCELCKYEF 130
>sp|O60103|DOA10_SCHPO ERAD-associated E3 ubiquitin-protein ligase doa10
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=doa10 PE=1 SV=1
Length = 1242
Score = 45.4 bits (106), Expect = 4e-04, Method: Composition-based stats.
Identities = 16/52 (30%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 21 CRICHEEEFESCNSLEAPCACSGTVKFAHRDCIQRWCYEKGNTTCEICLQEY 72
CR+C E + L PC C+G++++ H++C+ W T CE+C ++
Sbjct: 8 CRVCRCEGAPD-SPLFHPCKCTGSIRYVHQECLVEWLGHSKKTHCELCKAKF 58
>sp|Q8NA82|MARHA_HUMAN Probable E3 ubiquitin-protein ligase MARCH10 OS=Homo sapiens
GN=MARCH10 PE=2 SV=3
Length = 808
Score = 45.1 bits (105), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 8/58 (13%)
Query: 21 CRICHEEEFESCNSLEAPCACSGTVKFAHRDCIQRWCYEKGNT--------TCEICLQ 70
CRIC N L PC C G+++F H++C+++W K + TCE+C Q
Sbjct: 659 CRICQIAGGSPSNPLLEPCGCVGSLQFVHQECLKKWLKVKITSGADLGAVKTCEMCKQ 716
>sp|Q28EX7|MARH2_XENTR E3 ubiquitin-protein ligase MARCH2 OS=Xenopus tropicalis GN=march2
PE=2 SV=1
Length = 246
Score = 45.1 bits (105), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Query: 21 CRICHEEEFESCNSLEAPCACSGTVKFAHRDCIQRWCYEKGNTTCEICLQEY 72
CRICHE + L +PC C+GT+ H+ C+++W + CE+C E+
Sbjct: 64 CRICHEGG--NGERLLSPCDCTGTLGTVHKTCLEKWLSSSNTSYCELCHTEF 113
>sp|Q28IK8|MARH8_XENTR E3 ubiquitin-protein ligase MARCH8 OS=Xenopus tropicalis GN=march8
PE=2 SV=1
Length = 264
Score = 45.1 bits (105), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 14 NPETTSHCRICHEEEFESCNSLEAPCACSGTVKFAHRDCIQRWCYEKGNTTCEICLQEY 72
P + CRICH E + + L PC C+G++ F H+ C+Q+W CE+C E+
Sbjct: 46 TPSSQDICRICHCEGDDE-SPLITPCHCTGSLHFVHQACLQQWIKSSDTRCCELCKFEF 103
>sp|Q5XH39|MARH8_XENLA E3 ubiquitin-protein ligase MARCH8 OS=Xenopus laevis GN=march8 PE=2
SV=2
Length = 264
Score = 45.1 bits (105), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 15 PETTSHCRICHEEEFESCNSLEAPCACSGTVKFAHRDCIQRWCYEKGNTTCEICLQEY 72
P + CRICH E + + L PC C+G++ F H+ C+Q+W CE+C E+
Sbjct: 47 PSSQDICRICHCEGDDE-SPLITPCHCTGSLHFVHQACLQQWIKSSDTRCCELCKFEF 103
>sp|Q6NYK8|MARH5_DANRE E3 ubiquitin-protein ligase MARCH5 OS=Danio rerio GN=march5 PE=2
SV=1
Length = 289
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 28/60 (46%), Gaps = 7/60 (11%)
Query: 20 HCRICHEEEFES-CNSLEAPCACSGTVKFAHRDCIQRWCYEK------GNTTCEICLQEY 72
HC +C E E +PC C G K+ H+ C+QRW EK G +C C EY
Sbjct: 11 HCWVCFATEKEDRAAEWVSPCRCKGCTKWIHQSCLQRWLDEKQKGNSGGAVSCPQCGTEY 70
>sp|Q91T40|LAP_LSDV E3 ubiquitin-protein ligase LAP OS=Lumpy skin disease virus
GN=LW010 PE=3 SV=1
Length = 162
Score = 40.4 bits (93), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 33/70 (47%), Gaps = 7/70 (10%)
Query: 16 ETTSHCRICHEEEFESCNSLEAPCACSGTVKFAHRDCIQRWCYEKGNTTCEICLQEYGPG 75
T +HC IC +E S N C C K H++C++ W NT C+IC +Y
Sbjct: 6 NTNTHCWICKDEYNVSTNF----CNCKNEFKIVHKNCLEEWINFSHNTKCKICNGKYN-- 59
Query: 76 YTAPSKKSQL 85
+KKS L
Sbjct: 60 -IKKNKKSCL 68
>sp|Q5ZJ41|MARH5_CHICK E3 ubiquitin-protein ligase MARCH5 OS=Gallus gallus GN=MARCH5
PE=2 SV=1
Length = 281
Score = 39.3 bits (90), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 33/66 (50%), Gaps = 8/66 (12%)
Query: 15 PETTSH-CRICHE-EEFESCNSLEAPCACSGTVKFAHRDCIQRWCYEK--GNTT----CE 66
P+T C +C +E + PC C G+ K+ H+ C+QRW EK GN+T C
Sbjct: 10 PQTMDRSCWVCFATDEDDRTAEWVRPCRCRGSTKWVHQTCLQRWVDEKQRGNSTARVACP 69
Query: 67 ICLQEY 72
C EY
Sbjct: 70 QCNAEY 75
>sp|Q6GM44|MARH5_XENLA E3 ubiquitin-protein ligase MARCH5 OS=Xenopus laevis GN=march5
PE=2 SV=1
Length = 283
Score = 39.3 bits (90), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 24/41 (58%), Gaps = 6/41 (14%)
Query: 38 PCACSGTVKFAHRDCIQRWCYEK--GNTT----CEICLQEY 72
PC C G+ K+ H+ C+QRW EK GN+T C C EY
Sbjct: 35 PCRCRGSTKWVHQACLQRWVDEKQRGNSTARVACPQCNAEY 75
>sp|Q3KNM2|MARH5_MOUSE E3 ubiquitin-protein ligase MARCH5 OS=Mus musculus GN=March5 PE=2
SV=1
Length = 278
Score = 38.9 bits (89), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 24/41 (58%), Gaps = 6/41 (14%)
Query: 38 PCACSGTVKFAHRDCIQRWCYEK--GNTT----CEICLQEY 72
PC C G+ K+ H+ C+QRW EK GN+T C C EY
Sbjct: 32 PCRCRGSTKWVHQACLQRWVDEKQRGNSTARVACPQCNAEY 72
>sp|Q9NX47|MARH5_HUMAN E3 ubiquitin-protein ligase MARCH5 OS=Homo sapiens GN=MARCH5 PE=1
SV=1
Length = 278
Score = 38.9 bits (89), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 24/41 (58%), Gaps = 6/41 (14%)
Query: 38 PCACSGTVKFAHRDCIQRWCYEK--GNTT----CEICLQEY 72
PC C G+ K+ H+ C+QRW EK GN+T C C EY
Sbjct: 32 PCRCRGSTKWVHQACLQRWVDEKQRGNSTARVACPQCNAEY 72
>sp|Q0X0A5|MARH5_CHLAE E3 ubiquitin-protein ligase MARCH5 OS=Chlorocebus aethiops
GN=MARCH5 PE=2 SV=1
Length = 278
Score = 38.9 bits (89), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 24/41 (58%), Gaps = 6/41 (14%)
Query: 38 PCACSGTVKFAHRDCIQRWCYEK--GNTT----CEICLQEY 72
PC C G+ K+ H+ C+QRW EK GN+T C C EY
Sbjct: 32 PCRCRGSTKWVHQACLQRWVDEKQRGNSTARVACPQCNAEY 72
>sp|Q3ZC24|MARH5_BOVIN E3 ubiquitin-protein ligase MARCH5 OS=Bos taurus GN=MARCH5 PE=2
SV=1
Length = 278
Score = 38.9 bits (89), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 24/41 (58%), Gaps = 6/41 (14%)
Query: 38 PCACSGTVKFAHRDCIQRWCYEK--GNTT----CEICLQEY 72
PC C G+ K+ H+ C+QRW EK GN+T C C EY
Sbjct: 32 PCRCRGSTKWVHQACLQRWVDEKQRGNSTARVACPQCNAEY 72
>sp|P90495|MIR1_HHV8P E3 ubiquitin-protein ligase MIR1 OS=Human herpesvirus 8 type P
(isolate GK18) GN=K3 PE=1 SV=1
Length = 333
Score = 37.4 bits (85), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Query: 21 CRICHEEEFESCNSLEAPCACSGTVKFAHRDCIQRWCYEKGNTTCEICLQEY 72
C IC+EE N C C+G ++ HR C+ W NT C+IC Y
Sbjct: 9 CWICNEE---LGNERFRACGCTGELENVHRSCLSTWLTISRNTACQICGVVY 57
>sp|P90489|MIR2_HHV8P E3 ubiquitin-protein ligase MIR2 OS=Human herpesvirus 8 type P
(isolate GK18) GN=K5 PE=1 SV=1
Length = 256
Score = 37.4 bits (85), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 24/52 (46%), Gaps = 3/52 (5%)
Query: 21 CRICHEEEFESCNSLEAPCACSGTVKFAHRDCIQRWCYEKGNTTCEICLQEY 72
C IC EE N PCAC+G + H C+ W NT C++C Y
Sbjct: 15 CWICREE---VGNEGIHPCACTGELDVVHPQCLSTWLTVSRNTACQMCRVIY 63
>sp|O41933|MIR1_MHV68 E3 ubiquitin-protein ligase MIR1 OS=Murid herpesvirus 4 GN=K3
PE=1 SV=1
Length = 201
Score = 37.0 bits (84), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 4/57 (7%)
Query: 16 ETTSHCRICHEEEFESCNSLEAPCACSGTVKFAHRDCIQRWCYEKGNTTCEICLQEY 72
T C ICH+ E L+ C C G+ +H+DC++ W TC +C Y
Sbjct: 3 STGEFCWICHQPE----GPLKRFCGCKGSCAVSHQDCLRGWLETSRRQTCALCGTPY 55
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.133 0.408
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 93,529,367
Number of Sequences: 539616
Number of extensions: 3878648
Number of successful extensions: 96205
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1159
Number of HSP's successfully gapped in prelim test: 98
Number of HSP's that attempted gapping in prelim test: 66311
Number of HSP's gapped (non-prelim): 19510
length of query: 238
length of database: 191,569,459
effective HSP length: 114
effective length of query: 124
effective length of database: 130,053,235
effective search space: 16126601140
effective search space used: 16126601140
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)