BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 026481
         (238 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q9SX77|UMP6_ARATH Uncharacterized protein At1g47420, mitochondrial OS=Arabidopsis
           thaliana GN=At1g47420 PE=1 SV=1
          Length = 257

 Score =  254 bits (648), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 125/221 (56%), Positives = 157/221 (71%), Gaps = 14/221 (6%)

Query: 27  NNHHL-RHLSSSRSLFSLSSPAAS------------IPSKSIPFDCRSSLVMSIGCNRSF 73
            +HH+ +HLS  R+L +++ P AS            I   S+  D +    M +G  R F
Sbjct: 31  GSHHIEKHLSRHRTLITVA-PNASVIGDVQINKGSFISYASVSRDLQYPRAMGMGQVRRF 89

Query: 74  SEDVAHMPVIRDPEIQRAFKDLMAADWGELPASVIHDAKSALSRNNDDKAGQEVLKNVFS 133
           SEDV+HMP + D ++  AFKDLMAADW ELP++V+ DAK+A+S+N DDKAGQE LKNVF 
Sbjct: 90  SEDVSHMPEMEDSDVLNAFKDLMAADWAELPSAVVKDAKTAISKNTDDKAGQEALKNVFR 149

Query: 134 AAEAVEEFIGIIMNIKMEFDDEIGLSGENVKPLSNELSSAIRTVYQRYATYLDAFGPDES 193
           AAEAVEEF GI+ +IKME DD IG+SGE VKPL N+++ A+RT YQRYA YLD+F P+E 
Sbjct: 150 AAEAVEEFGGILTSIKMEIDDSIGMSGEGVKPLPNDITDALRTAYQRYAEYLDSFEPEEV 209

Query: 194 YLRKKVETELGSKMIFLKMRCAGLGSEWGKVFYYGCQCHCG 234
           YL+KKVE ELG+KMI LKMRC+GLGSEWGKV   G     G
Sbjct: 210 YLKKKVEMELGTKMIHLKMRCSGLGSEWGKVTVLGTSGLSG 250


>sp|Q8WN96|ITPR2_BOVIN Inositol 1,4,5-trisphosphate receptor type 2 OS=Bos taurus GN=ITPR2
           PE=2 SV=1
          Length = 2701

 Score = 35.0 bits (79), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 30/105 (28%), Positives = 48/105 (45%), Gaps = 19/105 (18%)

Query: 53  KSIPFDCRSSLVMSIGCNRSFSEDVAHMPVIRDPEIQRAFKDLMAADWGELPASV-IHDA 111
           +S+PFD R+S          F   + HM V RDP+ +       A  W E+P  + IH+ 
Sbjct: 768 ESLPFDLRAS----------FCRLMLHMHVDRDPQ-ESVVPVRYARLWTEIPTKITIHEY 816

Query: 112 KSALSRNNDDKAGQEVLKNVFS-AAEAVEEFIGIIMNIKMEFDDE 155
            S    + +D      +K  F+   E VEE++  ++N    F D+
Sbjct: 817 DSITDSSRND------MKRKFALTMEFVEEYLKEVVNQPFPFGDK 855


>sp|Q8WSR4|ITPR_ASTPE Inositol 1,4,5-trisphosphate receptor OS=Asterina pectinifera
           GN=IP3R PE=1 SV=1
          Length = 2698

 Score = 34.3 bits (77), Expect = 0.77,   Method: Composition-based stats.
 Identities = 31/109 (28%), Positives = 53/109 (48%), Gaps = 17/109 (15%)

Query: 50  IPSKSIPFDCRSSLVMSIGCNRSFSEDVAHMPVIRDPEIQRAFKDLMAADWGELPASV-I 108
           +  +S+P+D R+S          F+  + HM V RDP+ ++      A  W E+P  + I
Sbjct: 753 MSDESLPYDLRAS----------FTRLMLHMHVDRDPK-EQVTPVKYAELWSEIPTQITI 801

Query: 109 HDAKSALSRNNDDKAGQEVLKNVFS-AAEAVEEFI-GIIMNIKMEFDDE 155
            D   A   NN   AG+E  +  FS   + VEE++  ++  + + +D E
Sbjct: 802 DDYDGA---NNLTHAGKEDAQPKFSLTIKFVEEYLCNVVSGVLVVYDKE 847


>sp|Q6TS43|CAPSD_CPVBM Capsid protein VP1 OS=Bombyx mori cytoplasmic polyhedrosis virus
           PE=1 SV=1
          Length = 1333

 Score = 32.3 bits (72), Expect = 3.3,   Method: Composition-based stats.
 Identities = 21/68 (30%), Positives = 38/68 (55%), Gaps = 4/68 (5%)

Query: 131 VFSAAEAVEEFI-GIIMNI-KMEFDDEIGLSGENVKPLSNELSSAIRTVYQRYATYLDAF 188
           V + AE   E++ G++M + K+  D+ + + GE   P+SN LS+ +  V +   TY +  
Sbjct: 237 VTAGAEQSAEYVSGLLMVLFKVMTDNRLVIVGETTTPMSNTLSTVVNNVLR--TTYHNNV 294

Query: 189 GPDESYLR 196
           G + + LR
Sbjct: 295 GVNPALLR 302


>sp|Q0V8C2|EXOC3_BOVIN Exocyst complex component 3 OS=Bos taurus GN=EXOC3 PE=2 SV=1
          Length = 745

 Score = 32.0 bits (71), Expect = 3.9,   Method: Composition-based stats.
 Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 3/56 (5%)

Query: 87  EIQRAFKDLMAADWGELPASV--IHDAKSALSRNNDDKAGQEVLKNVFSAAEAVEE 140
           +IQ++  D+ + DW +   ++  + D K A+ R++   A  E LKN+FS  E V E
Sbjct: 74  DIQQSLADV-SKDWRQSINTIESLKDVKDAVVRHSQLAAAVENLKNIFSVPEIVRE 128


>sp|Q01969|OMPA_THEMA Outer membrane protein alpha OS=Thermotoga maritima (strain ATCC
           43589 / MSB8 / DSM 3109 / JCM 10099) GN=omp-alpha PE=1
           SV=2
          Length = 400

 Score = 30.8 bits (68), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 23/72 (31%), Positives = 39/72 (54%), Gaps = 1/72 (1%)

Query: 136 EAVEEFIGIIMNIKMEFDDEIGLSGENVKPLSNELSSAIRTVYQRYATYLDAFGPDESYL 195
           E +E+   +   I+MEFD EI L+ E V  +  +L +  R  Y+RY   +DA   + +  
Sbjct: 131 ELLEKIDAVKEEIEMEFDKEISLNREVVNNIGLKLGNLSRD-YERYKENVDAKISEVNEK 189

Query: 196 RKKVETELGSKM 207
              +E +LG+K+
Sbjct: 190 LAALEKDLGNKI 201


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.320    0.132    0.386 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 80,048,779
Number of Sequences: 539616
Number of extensions: 3065661
Number of successful extensions: 8898
Number of sequences better than 100.0: 15
Number of HSP's better than 100.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 8896
Number of HSP's gapped (non-prelim): 15
length of query: 238
length of database: 191,569,459
effective HSP length: 114
effective length of query: 124
effective length of database: 130,053,235
effective search space: 16126601140
effective search space used: 16126601140
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)