Query 026481
Match_columns 238
No_of_seqs 16 out of 18
Neff 2.1
Searched_HMMs 13730
Date Mon Mar 25 14:36:39 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026481.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/026481hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1i5na_ a.24.10.3 (A:) Chemota 62.8 16 0.0012 24.8 7.4 65 124-188 33-102 (128)
2 d1rbli_ d.73.1.1 (I:) Ribulose 61.0 2.8 0.0002 31.0 3.0 50 70-120 8-83 (109)
3 d1khya_ a.174.1.1 (A:) N-termi 59.0 17 0.0012 24.4 6.8 46 134-179 43-93 (139)
4 d2f8ja1 c.67.1.1 (A:1-334) His 54.3 2.8 0.0002 32.4 2.1 51 153-205 19-71 (334)
5 d1tqga_ a.24.10.3 (A:) Chemota 52.3 22 0.0016 23.5 6.4 69 116-187 29-102 (105)
6 d1w07a2 a.29.3.2 (A:462-659) A 49.9 9.8 0.00071 28.8 4.6 76 114-196 77-154 (198)
7 d2ddha2 a.29.3.2 (A:475-655) P 48.7 12 0.00084 28.1 4.9 75 114-196 68-144 (181)
8 d1rrqa1 a.96.1.2 (A:9-229) Cat 47.9 22 0.0016 27.0 6.5 89 84-175 42-144 (221)
9 d1keaa_ a.96.1.2 (A:) Thymine- 43.5 14 0.00099 28.4 4.6 89 83-174 46-149 (217)
10 d2fnaa1 a.4.5.11 (A:284-356) H 39.5 7.1 0.00051 27.1 2.1 30 82-111 35-71 (73)
11 d1b65a_ d.154.1.1 (A:) L-amino 37.6 17 0.0013 31.0 4.7 49 127-181 312-363 (367)
12 d1svdm1 d.73.1.1 (M:3-110) Rib 37.2 11 0.00077 27.7 2.8 30 71-101 9-38 (108)
13 d1c20a_ a.4.3.1 (A:) DNA-bindi 34.7 19 0.0014 25.7 3.9 76 89-189 27-108 (128)
14 d1ulib_ d.17.4.4 (B:) Biphenyl 34.0 16 0.0012 26.2 3.5 23 165-187 7-29 (177)
15 d1wdds_ d.73.1.1 (S:) Ribulose 32.7 13 0.00096 27.8 2.8 30 71-101 10-39 (122)
16 d2b5dx2 c.6.2.4 (X:1-404) Alph 31.3 41 0.003 27.9 6.0 50 133-182 315-372 (404)
17 d2akja4 d.134.1.1 (A:175-345) 29.3 9.7 0.00071 28.3 1.5 37 170-208 114-161 (171)
18 d1wqlb1 d.17.4.4 (B:5-186) Sma 29.3 33 0.0024 24.7 4.5 27 161-187 8-34 (182)
19 d1k75a_ c.82.1.2 (A:) L-histid 28.8 35 0.0026 29.6 5.3 87 98-188 4-99 (431)
20 d1r2fa_ a.25.1.2 (A:) Ribonucl 26.3 1.3E+02 0.0097 23.1 9.8 96 82-192 8-111 (283)
21 d2abka_ a.96.1.1 (A:) Endonucl 26.1 9.9 0.00072 29.1 1.0 92 55-157 22-116 (211)
22 d1o6ba_ c.26.1.3 (A:) Phosphop 25.8 33 0.0024 22.8 3.7 40 79-120 122-162 (163)
23 d1xxxa1 c.1.10.1 (A:5-300) Dih 25.7 1.3E+02 0.0093 22.7 8.6 54 125-180 234-291 (296)
24 d1aopa3 d.134.1.1 (A:149-345) 25.5 23 0.0017 27.3 3.2 37 170-208 137-184 (197)
25 d1v2da_ c.67.1.1 (A:) Glutamin 25.3 8.1 0.00059 29.6 0.4 47 156-204 28-75 (368)
26 d2j9ua1 a.24.28.1 (A:148-241) 25.1 19 0.0014 25.9 2.4 21 133-153 5-25 (94)
27 d1t6ca1 c.55.1.8 (A:7-132) Exo 25.1 35 0.0026 23.9 3.9 42 164-205 47-103 (126)
28 d1bh9b_ a.22.1.3 (B:) TAF(II)2 24.9 41 0.003 23.6 4.2 35 141-182 49-83 (89)
29 d1orna_ a.96.1.1 (A:) Endonucl 24.3 13 0.00094 28.3 1.4 72 84-158 44-118 (214)
30 d1ryua_ a.4.3.1 (A:) SWI-SNF c 24.3 22 0.0016 25.3 2.6 93 73-189 5-105 (120)
31 d2g7sa2 a.121.1.1 (A:77-192) P 24.3 16 0.0011 24.0 1.7 29 159-187 31-59 (116)
32 d1bxni_ d.73.1.1 (I:) Ribulose 23.5 25 0.0018 26.3 2.9 45 76-120 7-77 (129)
33 d1k0wa_ c.74.1.1 (A:) L-ribulo 23.5 60 0.0043 22.7 4.9 36 128-171 180-215 (223)
34 d1li5a1 a.27.1.1 (A:316-402) C 23.4 90 0.0066 20.1 5.9 13 150-162 70-82 (87)
35 d1v72a1 c.67.1.1 (A:6-350) Phe 23.3 15 0.0011 25.9 1.5 44 155-201 4-49 (345)
36 d1ig6a_ a.4.3.1 (A:) MRF-2 DNA 23.1 21 0.0015 24.7 2.2 84 88-197 7-94 (107)
37 d1o04a_ c.82.1.1 (A:) Aldehyde 22.9 12 0.00085 31.4 1.0 87 75-161 40-136 (494)
38 d1f5na1 a.114.1.1 (A:284-583) 22.5 1.3E+02 0.0095 21.6 7.8 45 166-212 70-114 (300)
39 d1g8qa_ a.135.1.1 (A:) CD81 ex 22.5 86 0.0063 21.6 5.5 45 167-219 4-49 (90)
40 d2r5ea1 c.67.1.1 (A:12-429) Ky 22.4 20 0.0014 28.2 2.2 50 154-203 27-79 (418)
41 d1i60a_ c.1.15.4 (A:) Hypothet 22.3 76 0.0056 22.9 5.5 62 120-189 75-136 (278)
42 d1zoda1 c.67.1.4 (A:3-433) Dia 21.4 1.2E+02 0.0084 24.2 6.9 60 76-139 54-124 (431)
43 d1uk5a_ a.7.7.1 (A:) BAG-famil 21.2 54 0.0039 23.6 4.3 37 144-187 64-103 (111)
44 d1mxra_ a.25.1.2 (A:) Ribonucl 21.1 1.8E+02 0.013 22.7 11.4 108 71-193 16-134 (339)
45 d1ky8a_ c.82.1.1 (A:) Non-phos 20.8 28 0.002 28.9 3.0 75 76-150 42-123 (499)
46 d1ojra_ c.74.1.1 (A:) L-rhamnu 20.3 1E+02 0.0074 23.8 6.1 44 127-178 220-263 (274)
47 d2qfka1 a.1.1.2 (A:1-137) Deha 20.2 27 0.0019 24.4 2.3 20 170-189 116-135 (137)
No 1
>d1i5na_ a.24.10.3 (A:) Chemotaxis protein CheA P1 domain {Salmonella typhimurium [TaxId: 90371]}
Probab=62.78 E-value=16 Score=24.85 Aligned_cols=65 Identities=17% Similarity=0.248 Sum_probs=47.3
Q ss_pred HHHHHHHHHHHHHHHHHHHH-----HHHHHhhhhhhccCCCCCCCcCCchHHHHHHHHHHHHHHHHHhhc
Q 026481 124 GQEVLKNVFSAAEAVEEFIG-----IIMNIKMEFDDEIGLSGENVKPLSNELSSAIRTVYQRYATYLDAF 188 (238)
Q Consensus 124 GqeaL~nvfrAAeAvEeFgG-----iL~sLrmeiDDl~GlsGEnVkPLPd~~~~Al~tay~rY~~YLdsF 188 (238)
..+.+.++||++-.+.--.| .|..|=-++.|++..--++-.|+++.+.+.+..+++.-..+|+++
T Consensus 33 ~~~~~~~l~R~~HTLKG~a~~~gl~~i~~lah~lE~~l~~lr~~~~~~~~~~~~~l~~~~d~l~~~l~~~ 102 (128)
T d1i5na_ 33 DAEQLNAIFRAAHSIKGGAGTFGFTILQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAY 102 (128)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTTSSCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHhhHHhhcChHHHHHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 36789999999877665444 345555666666664434455888899999999999888888765
No 2
>d1rbli_ d.73.1.1 (I:) Ribulose 1,5-bisphosphate carboxylase-oxygenase {Synechococcus sp., strain pcc 6301 [TaxId: 1131]}
Probab=60.96 E-value=2.8 Score=30.98 Aligned_cols=50 Identities=22% Similarity=0.478 Sum_probs=38.7
Q ss_pred cccccccCCCCCCCCCHHHHHHHHHHHHccc-----------------C--CCc-------hhHHHHHHhhhcccCC
Q 026481 70 NRSFSEDVAHMPVIRDPEIQRAFKDLMAADW-----------------G--ELP-------ASVIHDAKSALSRNND 120 (238)
Q Consensus 70 ~R~fS~d~~hlP~i~Dpei~~afKdLmA~sW-----------------~--elp-------~svv~~ak~alSk~td 120 (238)
.|.| |+.|-||+++|.+|.+-...|++-.| . .|| +.|+.+.+.|++...+
T Consensus 8 ~~~~-eTfSyLP~Ltd~~I~~QV~yll~qGw~i~iE~ad~~~~~~~yW~mwklPmf~~~d~~~Vl~ele~c~~~~p~ 83 (109)
T d1rbli_ 8 ERRF-ETFSYLPPLSDRQIAAQIEYMIEQGFHPLIEFNEHSNPEEFYWTMWKLPLFACAAPQQVLDEVRECRSEYGD 83 (109)
T ss_dssp CCCC-STTTTSSCCCHHHHHHHHHHHHHHTCEEEEEEESCCCTTCCCCEECSSCCTTCCCHHHHHHHHHHHHHHCTT
T ss_pred Cccc-cccccCCCCCHHHHHHHHHHHHhCCCceeEEEccCCCccceeeeecccCcccCCCHHHHHHHHHHHHHhCCc
Confidence 4667 69999999999999999999998654 4 555 3577777777766543
No 3
>d1khya_ a.174.1.1 (A:) N-terminal domain of ClpB (heat shock protein F84.1) {Escherichia coli [TaxId: 562]}
Probab=58.98 E-value=17 Score=24.43 Aligned_cols=46 Identities=7% Similarity=0.042 Sum_probs=29.6
Q ss_pred HHHHHHHHHHHHHHHhhhhhhccCC----CCC-CCcCCchHHHHHHHHHHH
Q 026481 134 AAEAVEEFIGIIMNIKMEFDDEIGL----SGE-NVKPLSNELSSAIRTVYQ 179 (238)
Q Consensus 134 AAeAvEeFgGiL~sLrmeiDDl~Gl----sGE-nVkPLPd~~~~Al~tay~ 179 (238)
+....+.+|..+..++.+++..+.- +|. +.-|+..+..+.++.+.+
T Consensus 43 ~~~iL~~~g~d~~~~~~~~~~~l~~~p~~~~~~~~~~~s~~~~~vl~~A~~ 93 (139)
T d1khya_ 43 VSPLLTSAGINAGQLRTDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDK 93 (139)
T ss_dssp HHHHHHHHTCCHHHHHHHHHHHHTTSCCC-------CBCHHHHHHHHHHHH
T ss_pred HHHHHHHcCCcHHHHHHHHHHHhhccccccCccccccccHHHHHHHHHHHH
Confidence 5567889999888888887776544 222 233566777777777654
No 4
>d2f8ja1 c.67.1.1 (A:1-334) Histidinol-phosphate aminotransferase HisC {Thermotoga maritima [TaxId: 2336]}
Probab=54.32 E-value=2.8 Score=32.42 Aligned_cols=51 Identities=20% Similarity=0.173 Sum_probs=34.8
Q ss_pred hhccCCC-CCCCcCCchHHHHHHHHHHHHHH-HHHhhcCCChhHHHHHHHHhhhh
Q 026481 153 DDEIGLS-GENVKPLSNELSSAIRTVYQRYA-TYLDAFGPDESYLRKKVETELGS 205 (238)
Q Consensus 153 DDl~Gls-GEnVkPLPd~~~~Al~tay~rY~-~YLdsFgpdE~yLrKKVE~ELGt 205 (238)
-|+|.|+ |||-=|.|+.+.+|+.++.+.-. .|--.-| ..-||+.+-.-++.
T Consensus 19 ~d~~~l~~~enp~~~p~~i~~~~~~~~~~~~~~~yp~~g--~~~Lr~aia~~~~~ 71 (334)
T d2f8ja1 19 RDKTYLALNENPFPFPEDLVDEVFRRLNSDALRIYYDSP--DEELIEKILSYLDT 71 (334)
T ss_dssp CCSEECSSCCCSSCCCHHHHHHHHHHCCTTGGGSCCCSS--CHHHHHHHHHHHTC
T ss_pred CCceEEECCCCCCCCCHHHHHHHHHHhhcchhcCCCCCC--cHHHHHHHHHHhcc
Confidence 5899995 99999999999999988775421 1111222 23389988876543
No 5
>d1tqga_ a.24.10.3 (A:) Chemotaxis protein CheA P1 domain {Thermotoga maritima [TaxId: 2336]}
Probab=52.29 E-value=22 Score=23.49 Aligned_cols=69 Identities=13% Similarity=0.263 Sum_probs=46.6
Q ss_pred cccCCchhHHHHHHHHHHHHHHHHHHHH-----HHHHHhhhhhhccCCCCCCCcCCchHHHHHHHHHHHHHHHHHhh
Q 026481 116 SRNNDDKAGQEVLKNVFSAAEAVEEFIG-----IIMNIKMEFDDEIGLSGENVKPLSNELSSAIRTVYQRYATYLDA 187 (238)
Q Consensus 116 Sk~tdDkAGqeaL~nvfrAAeAvEeFgG-----iL~sLrmeiDDl~GlsGEnVkPLPd~~~~Al~tay~rY~~YLds 187 (238)
.++.+| .+.+..+||++-.+.--.| .+..|=-++.|+.---=++-.|+++.+.+.+..+.+....++++
T Consensus 29 e~~~~~---~~~~~~l~R~~HTLKG~a~~~gl~~i~~lah~lE~~l~~~~~~~~~~~~~~~~~l~~~~d~l~~~l~~ 102 (105)
T d1tqga_ 29 EKNPED---MELINEAFRALHTLKGMAGTMGFSSMAKLCHTLENILDKARNSEIKITSDLLDKIFAGVDMITRMVDK 102 (105)
T ss_dssp HHCTTC---HHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTTSSCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHCCCc---HHHHHHHHHHHHHHcCchhhcCHHHHHHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 344444 5788999998876654444 23444445555544334455677889999999999998888875
No 6
>d1w07a2 a.29.3.2 (A:462-659) Acyl-coenzyme A oxidase 1, domains 3 and 4 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=49.94 E-value=9.8 Score=28.80 Aligned_cols=76 Identities=18% Similarity=0.277 Sum_probs=34.5
Q ss_pred hhcccCCchhHHHHHHHHHH--HHHHHHHHHHHHHHHhhhhhhccCCCCCCCcCCchHHHHHHHHHHHHHHHHHhhcCCC
Q 026481 114 ALSRNNDDKAGQEVLKNVFS--AAEAVEEFIGIIMNIKMEFDDEIGLSGENVKPLSNELSSAIRTVYQRYATYLDAFGPD 191 (238)
Q Consensus 114 alSk~tdDkAGqeaL~nvfr--AAeAvEeFgGiL~sLrmeiDDl~GlsGEnVkPLPd~~~~Al~tay~rY~~YLdsFgpd 191 (238)
++.+...|..=+++|++++. |.-.+++..|.+-+- . =+|++.++.|.+.+.+-+...=.==....||||+.
T Consensus 77 ~i~~~~~~~~~k~vL~~L~~LyaL~~i~~~~g~fl~~-----~--~ls~~q~~~l~~~i~~L~~~Lrp~Av~LVDAF~~p 149 (198)
T d1w07a2 77 KLEQDIGGKGVKKQLNNLCYIYALYLLHKHLGDFLST-----N--CITPKQASLANDQLRSLYTQVRPNAVALVDAFNYT 149 (198)
T ss_dssp HTTSCCCSTTHHHHHHHHHHHHHHHHHHHTHHHHHHT-----T--SSCHHHHHHHHHHHHHHHHHHGGGHHHHHHTTCCC
T ss_pred HHhccCCChHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----C--CCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCC
Confidence 34443345555667776653 334444444432210 0 12333333333333322222222234567888888
Q ss_pred hhHHH
Q 026481 192 ESYLR 196 (238)
Q Consensus 192 E~yLr 196 (238)
+..|.
T Consensus 150 D~~L~ 154 (198)
T d1w07a2 150 DHYLN 154 (198)
T ss_dssp HHHHT
T ss_pred HHHhc
Confidence 87764
No 7
>d2ddha2 a.29.3.2 (A:475-655) Peroxisomal acyl-CoA oxidase-II, domains 3 and 4 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=48.74 E-value=12 Score=28.06 Aligned_cols=75 Identities=19% Similarity=0.244 Sum_probs=39.9
Q ss_pred hhcccCCchhHHHHHHHHHH--HHHHHHHHHHHHHHHhhhhhhccCCCCCCCcCCchHHHHHHHHHHHHHHHHHhhcCCC
Q 026481 114 ALSRNNDDKAGQEVLKNVFS--AAEAVEEFIGIIMNIKMEFDDEIGLSGENVKPLSNELSSAIRTVYQRYATYLDAFGPD 191 (238)
Q Consensus 114 alSk~tdDkAGqeaL~nvfr--AAeAvEeFgGiL~sLrmeiDDl~GlsGEnVkPLPd~~~~Al~tay~rY~~YLdsFgpd 191 (238)
++.+.. |+.=+++|+++++ |..-+|+.-|.+.+-. . +|++.++.|++.+.+.+...=.-=+...|+||+.
T Consensus 68 ~i~~~~-~~~~k~vL~~L~~LyaL~~i~~~~g~fl~~g-----~--ls~~q~~~i~~~i~~L~~~lrp~Av~LVDaF~~~ 139 (181)
T d2ddha2 68 KLPKIQ-DKAVQAVLRNLCLLYSLYGISQKGGDFLEGS-----I--ITGAQLSQVNARILELLTLIRPNAVALVDAFDFK 139 (181)
T ss_dssp HGGGCS-SHHHHHHHHHHHHHHHHHHHHHTHHHHHHTT-----S--SCHHHHHHHHHHHHHHHHHHGGGHHHHHHTTCCC
T ss_pred HHHhCC-ChHHHHHHHHHHHHHHHHHHHHhHHHHHhcC-----C--CCHHHHHHHHHHHHHHHHHHHHHHHHHhHhcCCC
Confidence 455543 5556777777665 3445555555332110 0 3444444444444443333322334677999999
Q ss_pred hhHHH
Q 026481 192 ESYLR 196 (238)
Q Consensus 192 E~yLr 196 (238)
+..|+
T Consensus 140 D~~L~ 144 (181)
T d2ddha2 140 DMTLG 144 (181)
T ss_dssp HHHHT
T ss_pred HHHHc
Confidence 98875
No 8
>d1rrqa1 a.96.1.2 (A:9-229) Catalytic domain of MutY {Bacillus stearothermophilus [TaxId: 1422]}
Probab=47.85 E-value=22 Score=26.99 Aligned_cols=89 Identities=12% Similarity=0.091 Sum_probs=53.7
Q ss_pred CCHHHHHHHHHHHHc--ccCCCchhHHHHHHhhhcccCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCC---
Q 026481 84 RDPEIQRAFKDLMAA--DWGELPASVIHDAKSALSRNNDDKAGQEVLKNVFSAAEAVEEFIGIIMNIKMEFDDEIGL--- 158 (238)
Q Consensus 84 ~Dpei~~afKdLmA~--sW~elp~svv~~ak~alSk~tdDkAGqeaL~nvfrAAeAvEeFgGiL~sLrmeiDDl~Gl--- 158 (238)
+|.-+.++++.|++. +|..|-..-..++++.+...+=-. .+..-.=.+.+.+++|+|.+-..+.+|-.|=|+
T Consensus 42 ~~~~v~~~~~~L~~~~~t~~~la~a~~~~l~~~i~~~G~~~---ra~~l~~~~~~~~~~~~G~vp~~~~~Ll~LpGIG~k 118 (221)
T d1rrqa1 42 RVETVIPYFEQFIDRFPTLEALADADEDEVLKAWEGLGYYS---RVRNLHAAVKEVKTRYGGKVPDDPDEFSRLKGVGPY 118 (221)
T ss_dssp CHHHHHHHHHHHHHHSCSHHHHHHSCHHHHHHHHTTSSCTH---HHHHHHHHHHHHHHHHTTCCCCSHHHHHTSTTCCHH
T ss_pred cHHHHHHHHHHHHHhcchHHHHHhhcHHHHHhhhccchhhh---hhHHHHHHHHHHhhhcCCCCchHHHHHHHHHHhhhH
Confidence 588899999999884 444443344456666666543322 233333346788899999766655555444443
Q ss_pred ---------CCCCCcCCchHHHHHHH
Q 026481 159 ---------SGENVKPLSNELSSAIR 175 (238)
Q Consensus 159 ---------sGEnVkPLPd~~~~Al~ 175 (238)
-|..+-|+..++.+-+.
T Consensus 119 TA~~il~~a~~~p~~~VDt~v~Rv~~ 144 (221)
T d1rrqa1 119 TVGAVLSLAYGVPEPAVNGNVMRVLS 144 (221)
T ss_dssp HHHHHHHHHTCCCCCCCCHHHHHHHH
T ss_pred HHHHHHHHHhcCcccccCccHHHHHH
Confidence 35666666666655443
No 9
>d1keaa_ a.96.1.2 (A:) Thymine-DNA glycosylase {Archaeon Methanobacterium thermoformicicum [TaxId: 145262]}
Probab=43.49 E-value=14 Score=28.42 Aligned_cols=89 Identities=7% Similarity=0.153 Sum_probs=57.1
Q ss_pred CCCHHHHHHHHHHHHc--ccCCCchhHHHHHHhhhcccCCchhHHHHHHHHHHHHHH-HHHHHHHHHHHhhhhhhccCC-
Q 026481 83 IRDPEIQRAFKDLMAA--DWGELPASVIHDAKSALSRNNDDKAGQEVLKNVFSAAEA-VEEFIGIIMNIKMEFDDEIGL- 158 (238)
Q Consensus 83 i~Dpei~~afKdLmA~--sW~elp~svv~~ak~alSk~tdDkAGqeaL~nvfrAAeA-vEeFgGiL~sLrmeiDDl~Gl- 158 (238)
-+|..+..+++.|+.. +|..|-.+-..++++++...+=- ..--++..++|+. +++|||.+-.-+.||-.|=|+
T Consensus 46 T~~~~v~~~~~~l~~~~pt~~~la~a~~~~l~~~i~~~G~~---~~KA~~l~~~a~~i~~~~~g~~p~~~~~L~~LpGVG 122 (217)
T d1keaa_ 46 TTAGHVKKIYDKFFVKYKCFEDILKTPKSEIAKDIKEIGLS---NQRAEQLKELARVVINDYGGRVPRNRKAILDLPGVG 122 (217)
T ss_dssp SCHHHHHHHHHHHHHHCCSHHHHHHSCHHHHHHHTGGGSCH---HHHHHHHHHHHHHHHHHHTTSCCSCHHHHHTSTTCC
T ss_pred CcHHHHHHHHHHHHHhcccHHHHHHhhHHHHHHHHHHHHhh---hHHHHHHHHHHHHHHhhccCCcchhhHHHHHHHhhh
Confidence 4788999999999874 34444344445666666653311 2244667777775 567999777666666555554
Q ss_pred -----------CCCCCcCCchHHHHHH
Q 026481 159 -----------SGENVKPLSNELSSAI 174 (238)
Q Consensus 159 -----------sGEnVkPLPd~~~~Al 174 (238)
-|+.+.|+.+++.+-+
T Consensus 123 ~kTA~~il~~~~~~~~~~vD~~v~Rv~ 149 (217)
T d1keaa_ 123 KYTCAAVMCLAFGKKAAMVDANFVRVI 149 (217)
T ss_dssp HHHHHHHHHHTTCCCCCCCCHHHHHHH
T ss_pred hhhhHHHHHHhcCCcccccccchhhhh
Confidence 4677777777765544
No 10
>d2fnaa1 a.4.5.11 (A:284-356) Hypothetical protein SSO1545, C-terminal domain {Sulfolobus solfataricus [TaxId: 2287]}
Probab=39.45 E-value=7.1 Score=27.09 Aligned_cols=30 Identities=27% Similarity=0.289 Sum_probs=25.1
Q ss_pred CCCCHHHHHHHHHHHHcccC-------CCchhHHHHH
Q 026481 82 VIRDPEIQRAFKDLMAADWG-------ELPASVIHDA 111 (238)
Q Consensus 82 ~i~Dpei~~afKdLmA~sW~-------elp~svv~~a 111 (238)
.|.|+.+-+.++.|+--+|= .|||.|+..|
T Consensus 35 ~I~d~~ls~lL~nL~k~~~iek~~~~Y~i~DPv~~~a 71 (73)
T d2fnaa1 35 EISDSEIYNYLTQLTKHSWIIKEGEKYCPSEPLISLA 71 (73)
T ss_dssp CCCHHHHHHHHHHHHHTTSEEESSSCEEESSHHHHHH
T ss_pred CCChHHHHHHHHHHHHcCceeecCCeeccCcHHHHHh
Confidence 58899999999999999994 5788887654
No 11
>d1b65a_ d.154.1.1 (A:) L-aminopeptidase D-Ala-esterase/amidase DmpA {Ochrobactrum anthropi [TaxId: 529]}
Probab=37.64 E-value=17 Score=30.99 Aligned_cols=49 Identities=24% Similarity=0.393 Sum_probs=35.4
Q ss_pred HHHHHHHH-HHHHHHHHHHHHHHhhhhhhccCCC--CCCCcCCchHHHHHHHHHHHHH
Q 026481 127 VLKNVFSA-AEAVEEFIGIIMNIKMEFDDEIGLS--GENVKPLSNELSSAIRTVYQRY 181 (238)
Q Consensus 127 aL~nvfrA-AeAvEeFgGiL~sLrmeiDDl~Gls--GEnVkPLPd~~~~Al~tay~rY 181 (238)
.|..+|+| |||+||- ||.+|.++ .+..|.. |.-+.-|| .+.|+...+||
T Consensus 312 ~l~~lf~Aaaea~eeA--I~nal~~A-~t~~G~~~~~~~~~alp---~d~~~~~~~~~ 363 (367)
T d1b65a_ 312 PLDTVYLAAVDSVEEA--VVNAMIAA-EDMGGTPFDRLLVQAID---HERLRAVLRQY 363 (367)
T ss_dssp GGHHHHHHHHHHHHHH--HHHHHHHC-CCEECSTTCSCEECCCC---HHHHHHHHHHT
T ss_pred hhCHHHHHHHHHHHHH--HHHHHHhc-CCccCcCCCCCEecCCC---HHHHHHHHHHh
Confidence 45667774 6888885 78888776 5677874 44588999 56677777777
No 12
>d1svdm1 d.73.1.1 (M:3-110) Ribulose 1,5-bisphosphate carboxylase-oxygenase {Halothiobacillus neapolitanus [TaxId: 927]}
Probab=37.17 E-value=11 Score=27.73 Aligned_cols=30 Identities=20% Similarity=0.455 Sum_probs=25.6
Q ss_pred ccccccCCCCCCCCCHHHHHHHHHHHHcccC
Q 026481 71 RSFSEDVAHMPVIRDPEIQRAFKDLMAADWG 101 (238)
Q Consensus 71 R~fS~d~~hlP~i~Dpei~~afKdLmA~sW~ 101 (238)
+.| |+.|-||+++|.+|.+-...|++-.|.
T Consensus 9 ~~~-eTfSyLP~Ltde~I~~QV~yll~qGw~ 38 (108)
T d1svdm1 9 LKY-ETFSYLPPMNAERIRAQIKYAIAQGWS 38 (108)
T ss_dssp CCC-STTTTSCCCCHHHHHHHHHHHHHTTCE
T ss_pred ccc-cccccCCCCCHHHHHHHHHHHHHCCCE
Confidence 444 588999999999999999999987663
No 13
>d1c20a_ a.4.3.1 (A:) DNA-binding domain from the dead ringer protein {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=34.73 E-value=19 Score=25.70 Aligned_cols=76 Identities=16% Similarity=0.196 Sum_probs=45.5
Q ss_pred HHHHHHHHHcccCCC--chhHHHHHHhhhcccCCchhHHHHHHHHHHHHHHHHHHHHHH--HH--HhhhhhhccCCCCCC
Q 026481 89 QRAFKDLMAADWGEL--PASVIHDAKSALSRNNDDKAGQEVLKNVFSAAEAVEEFIGII--MN--IKMEFDDEIGLSGEN 162 (238)
Q Consensus 89 ~~afKdLmA~sW~el--p~svv~~ak~alSk~tdDkAGqeaL~nvfrAAeAvEeFgGiL--~s--LrmeiDDl~GlsGEn 162 (238)
.+.+.+.|...+..+ ++. ..|+.+ |.|+.=.+|.++||-= .. .=.+|-..+|+.
T Consensus 27 ~~~L~~f~~~rg~~~~~~P~---------------i~gk~v--DL~~Ly~~V~~~GG~~~V~~~~~W~~va~~lg~~--- 86 (128)
T d1c20a_ 27 LDDLFSFMQKRGTPINRLPI---------------MAKSVL--DLYELYNLVIARGGLVDVINKKLWQEIIKGLHLP--- 86 (128)
T ss_dssp HHHHHHHHTTTSSCSSCCCE---------------ETTEEC--CHHHHHHHHHHHTCHHHHHHHTTHHHHHHHTCCC---
T ss_pred HHHHHHHHHHcCCccCcCCe---------------ECCeec--cHHHHHHHHHHhcCHHHhcccccHHHHHHHhCCC---
Confidence 455556677777655 221 234433 7899999999999933 22 123455556663
Q ss_pred CcCCchHHHHHHHHHHHHHHHHHhhcC
Q 026481 163 VKPLSNELSSAIRTVYQRYATYLDAFG 189 (238)
Q Consensus 163 VkPLPd~~~~Al~tay~rY~~YLdsFg 189 (238)
|-......+|++.|.|| |..|+
T Consensus 87 --~~~~~~~~~L~~~Y~k~---L~~fE 108 (128)
T d1c20a_ 87 --SSITSAAFTLRTQYMKY---LYPYE 108 (128)
T ss_dssp --SSCCSHHHHHHHHHHHH---THHHH
T ss_pred --CCCCcHHHHHHHHHHHH---HHHHH
Confidence 22334566788887765 66663
No 14
>d1ulib_ d.17.4.4 (B:) Biphenyl dioxygenase small subunit BphA2 {Rhodococcus sp. (strain RHA1) [TaxId: 101510]}
Probab=34.03 E-value=16 Score=26.15 Aligned_cols=23 Identities=26% Similarity=0.406 Sum_probs=19.9
Q ss_pred CCchHHHHHHHHHHHHHHHHHhh
Q 026481 165 PLSNELSSAIRTVYQRYATYLDA 187 (238)
Q Consensus 165 PLPd~~~~Al~tay~rY~~YLds 187 (238)
|...+++..|+..+-||+..||+
T Consensus 7 ~~~~~l~~eI~~~l~r~A~~LD~ 29 (177)
T d1ulib_ 7 PVDPSLQHEIEQFYYWEAKLLND 29 (177)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHHHHHHhcc
Confidence 44588999999999999988875
No 15
>d1wdds_ d.73.1.1 (S:) Ribulose 1,5-bisphosphate carboxylase-oxygenase {Rice (Oryza sativa) [TaxId: 4530]}
Probab=32.70 E-value=13 Score=27.78 Aligned_cols=30 Identities=17% Similarity=0.516 Sum_probs=26.1
Q ss_pred ccccccCCCCCCCCCHHHHHHHHHHHHcccC
Q 026481 71 RSFSEDVAHMPVIRDPEIQRAFKDLMAADWG 101 (238)
Q Consensus 71 R~fS~d~~hlP~i~Dpei~~afKdLmA~sW~ 101 (238)
|.| |+.|-||+++|-+|.+-..-|++--|.
T Consensus 10 ~k~-ETfSyLP~ltd~qI~~QI~yll~qGw~ 39 (122)
T d1wdds_ 10 KKF-ETLSYLPPLTVEDLLKQIEYLLRSKWV 39 (122)
T ss_dssp CCC-STTTTSSCCCHHHHHHHHHHHHHTTCE
T ss_pred ccc-eeeccCCCCCHHHHHHHHHHHHHCCCe
Confidence 344 588999999999999999999998883
No 16
>d2b5dx2 c.6.2.4 (X:1-404) Alpha-amylase AmyC {Thermotoga maritima [TaxId: 2336]}
Probab=31.34 E-value=41 Score=27.86 Aligned_cols=50 Identities=10% Similarity=0.034 Sum_probs=38.6
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhcc--------CCCCCCCcCCchHHHHHHHHHHHHHH
Q 026481 133 SAAEAVEEFIGIIMNIKMEFDDEI--------GLSGENVKPLSNELSSAIRTVYQRYA 182 (238)
Q Consensus 133 rAAeAvEeFgGiL~sLrmeiDDl~--------GlsGEnVkPLPd~~~~Al~tay~rY~ 182 (238)
+|.++++.|-..+..+...+.+.. .+-|||-+.=+.+=.+-|+..|++-.
T Consensus 315 ~a~~~a~~f~~~~~~~~~~~~~~~~~~~vv~i~~DgE~fGh~w~eG~~fL~~l~~~l~ 372 (404)
T d2b5dx2 315 AVEEHARDFLHKKESQARRLMDIMGVEPVIVAPFDAELFGHWWFEGVFFLKRFFELVN 372 (404)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSSCCEEEEEEEGGGBTTTBTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhhccCCCCEEEEEecchhcccCchhHHHHHHHHHHHHh
Confidence 678888899888877777776654 36789988777777788999988754
No 17
>d2akja4 d.134.1.1 (A:175-345) Ferredoxin--nitrite reductase, NIR {Spinach (Spinacia oleracea) [TaxId: 3562]}
Probab=29.30 E-value=9.7 Score=28.25 Aligned_cols=37 Identities=16% Similarity=0.416 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHHH-----------HHHhhcCCChhHHHHHHHHhhhhhhh
Q 026481 170 LSSAIRTVYQRYA-----------TYLDAFGPDESYLRKKVETELGSKMI 208 (238)
Q Consensus 170 ~~~Al~tay~rY~-----------~YLdsFgpdE~yLrKKVE~ELGtkmI 208 (238)
+..||-.+|++|. .+++.+|.|+ .|+.||.+||.+.+
T Consensus 114 ~~~av~~~y~~~g~r~~r~~aR~~~li~~~G~e~--f~~~v~~~l~~~~~ 161 (171)
T d2akja4 114 VCKAMLEAFRDLGFRGNRQKCRMMWLIDELGMEA--FRGEVEKRMPEQVL 161 (171)
T ss_dssp HHHHHHHHHHHHCCCSSGGGCSHHHHHHHHCHHH--HHHHHHTTSTTSCC
T ss_pred HHHHHHHHHHHhcccchhhhhHHHHHHHHcCHHH--HHHHHHHHhCcccc
Confidence 3456666777553 2689999753 47889999987654
No 18
>d1wqlb1 d.17.4.4 (B:5-186) Small subunit of cumene dioxygenase CumA2 {Pseudomonas fluorescens [TaxId: 294]}
Probab=29.28 E-value=33 Score=24.69 Aligned_cols=27 Identities=37% Similarity=0.394 Sum_probs=23.0
Q ss_pred CCCcCCchHHHHHHHHHHHHHHHHHhh
Q 026481 161 ENVKPLSNELSSAIRTVYQRYATYLDA 187 (238)
Q Consensus 161 EnVkPLPd~~~~Al~tay~rY~~YLds 187 (238)
..-.|++-+++.+|+..+-||+..||.
T Consensus 8 ~~~~~~~~~l~~eIe~fl~r~A~lLD~ 34 (182)
T d1wqlb1 8 WPEMPVSLELQNAVEQFYYREAQLLDY 34 (182)
T ss_dssp CCSSCCCHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence 345788999999999999999987775
No 19
>d1k75a_ c.82.1.2 (A:) L-histidinol dehydrogenase HisD {Escherichia coli [TaxId: 562]}
Probab=28.81 E-value=35 Score=29.65 Aligned_cols=87 Identities=22% Similarity=0.322 Sum_probs=52.2
Q ss_pred cccCCCchhHHHHHHhhhcccCCchhHHHHHHHHHHHHHHHHHHHH-HHHHHhhhhhhc----cCCCCCCC----cCCch
Q 026481 98 ADWGELPASVIHDAKSALSRNNDDKAGQEVLKNVFSAAEAVEEFIG-IIMNIKMEFDDE----IGLSGENV----KPLSN 168 (238)
Q Consensus 98 ~sW~elp~svv~~ak~alSk~tdDkAGqeaL~nvfrAAeAvEeFgG-iL~sLrmeiDDl----~GlsGEnV----kPLPd 168 (238)
.+|.+|...- -+..|.+.. ....+++-+.|...-+.|.+-|= -|..+-..+|.. +-+|.++. +-+|+
T Consensus 4 i~~~~l~~~e---~~~ll~R~~-~~~~~~v~~~V~~Ii~~Vr~~GD~AL~~yt~kFD~~~~~~l~Vs~~Ei~~A~~~l~~ 79 (431)
T d1k75a_ 4 IDWNSCTAEQ---QRQLLMRPA-ISASESITRTVNDILDNVKARGDEALREYSAKFDKTTVTALKVSAEEIAAASERLSD 79 (431)
T ss_dssp EEGGGSCHHH---HHHHTCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCCCCSCSBCCHHHHHHHHHHSCH
T ss_pred eehhhCCHHH---HHHHcCCCC-CCccHHHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCccccccCHHHHHHHHhhCCH
Confidence 4788887643 344455432 11233344445555566666665 555666667632 22333332 24889
Q ss_pred HHHHHHHHHHHHHHHHHhhc
Q 026481 169 ELSSAIRTVYQRYATYLDAF 188 (238)
Q Consensus 169 ~~~~Al~tay~rY~~YLdsF 188 (238)
++.+||+.+++|=.+|=..=
T Consensus 80 el~~AI~~A~~rI~~FH~~Q 99 (431)
T d1k75a_ 80 ELKQAMAVAVKNIETFHTAQ 99 (431)
T ss_dssp HHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHhh
Confidence 99999999999998887653
No 20
>d1r2fa_ a.25.1.2 (A:) Ribonucleotide reductase R2 {Salmonella typhimurium [TaxId: 90371]}
Probab=26.33 E-value=1.3e+02 Score=23.08 Aligned_cols=96 Identities=14% Similarity=0.146 Sum_probs=57.6
Q ss_pred CCCCHHHHHHHHHHHHcccCCCchhHHHHHHhhhcccCCchhHHHHHHHHHHHHHHHHHHHH-HHH-HHhhhhhhccCCC
Q 026481 82 VIRDPEIQRAFKDLMAADWGELPASVIHDAKSALSRNNDDKAGQEVLKNVFSAAEAVEEFIG-IIM-NIKMEFDDEIGLS 159 (238)
Q Consensus 82 ~i~Dpei~~afKdLmA~sW~elp~svv~~ak~alSk~tdDkAGqeaL~nvfrAAeAvEeFgG-iL~-sLrmeiDDl~Gls 159 (238)
.|.|+......|...+.-|..=.=++-+|.+.= .+-|++ -|+++++++..--..+..=+ .+. .+..
T Consensus 8 ~~~d~~~~~~y~k~~~~fW~peEi~l~~D~~dw-~~Lt~~--Er~~~~~~l~~~~~~D~~v~~~~~~~~~~--------- 75 (283)
T d1r2fa_ 8 KIQDDKDLEVWNRLTSNFWLPEKVPLSNDIPAW-QTLSAA--EQQLTIRVFTGLTLLDTIQNIAGAPSLMA--------- 75 (283)
T ss_dssp SCSCHHHHHHHHHHHHTCCCGGGSCGGGGHHHH-HTSCHH--HHHHHHHHHHHHHHHHHHHHHTHHHHHHT---------
T ss_pred CCCcHHHHHHHHHHHhCCCCCcccChHhhHHHH-hhCCHH--HHHHHHHHHHHHHHHHHHHHccchhhhhh---------
Confidence 578899999999999999976554555565543 343444 48888888654433332222 111 1111
Q ss_pred CCCCcCCchH-----HHHHHHHHHHH-HHHHHhhcCCCh
Q 026481 160 GENVKPLSNE-----LSSAIRTVYQR-YATYLDAFGPDE 192 (238)
Q Consensus 160 GEnVkPLPd~-----~~~Al~tay~r-Y~~YLdsFgpdE 192 (238)
.-+.|+. .+-+.+++|++ |...|+++|.++
T Consensus 76 ---~~~~~E~~~~~~~q~~~E~iH~~~Ys~il~~l~~~~ 111 (283)
T d1r2fa_ 76 ---DAITPHEEAVLSNISFMEAVHARSYSSIFSTLCQTK 111 (283)
T ss_dssp ---TCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
T ss_pred ---hcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 1123442 34566777776 888899999765
No 21
>d2abka_ a.96.1.1 (A:) Endonuclease III {Escherichia coli [TaxId: 562]}
Probab=26.10 E-value=9.9 Score=29.11 Aligned_cols=92 Identities=12% Similarity=0.130 Sum_probs=55.5
Q ss_pred CCCCcCCcccccccccccccccCCCCCCCCCHHHHHHHHHHHHc--ccCCCchhHHHHHHhhhcccCCchhHHHHHHHHH
Q 026481 55 IPFDCRSSLVMSIGCNRSFSEDVAHMPVIRDPEIQRAFKDLMAA--DWGELPASVIHDAKSALSRNNDDKAGQEVLKNVF 132 (238)
Q Consensus 55 ~~~d~~~~~s~~~~~~R~fS~d~~hlP~i~Dpei~~afKdLmA~--sW~elp~svv~~ak~alSk~tdDkAGqeaL~nvf 132 (238)
.+.+.++||-.=++- ..| .--+|.-+.++++.|+.. +|..|-..-+.+++++++..+=- ...-+|..
T Consensus 22 ~~l~~~~p~~vli~~--iLs------qqT~~~~v~~~~~~l~~~~~t~~~la~a~~~~l~~~i~~~G~y---~~Ka~~l~ 90 (211)
T d2abka_ 22 TELNFSSPFELLIAV--LLS------AQATDVSVNKATAKLYPVANTPAAMLELGVEGVKTYIKTIGLY---NSKAENII 90 (211)
T ss_dssp CSSCCSSHHHHHHHH--HHT------TTSCHHHHHHHHHHHTTTCCSHHHHHHHHHHHHHHHHTTSTTH---HHHHHHHH
T ss_pred CCCCCCCHHHHHHHH--HHh------ccchHHHHHHHHHHHHHhccChHHHHhhhHhHhHHHHHHhhhh---hhHHHHHH
Confidence 344566777632211 111 345688999999999874 44444444456667777653321 23446777
Q ss_pred HHHH-HHHHHHHHHHHHhhhhhhccC
Q 026481 133 SAAE-AVEEFIGIIMNIKMEFDDEIG 157 (238)
Q Consensus 133 rAAe-AvEeFgGiL~sLrmeiDDl~G 157 (238)
++|+ -+++|||.+-.-+.+|-.|=|
T Consensus 91 ~~a~~i~~~~~g~~p~~~~~L~~LpG 116 (211)
T d2abka_ 91 KTCRILLEQHNGEVPEDRAALEALPG 116 (211)
T ss_dssp HHHHHHHHHTTTSCCSCHHHHHHSTT
T ss_pred HHHHHHHHHhcCchhHHHHHHHHHHh
Confidence 7777 578999977666655555444
No 22
>d1o6ba_ c.26.1.3 (A:) Phosphopantetheine adenylyltransferase {Bacillus subtilis [TaxId: 1423]}
Probab=25.78 E-value=33 Score=22.76 Aligned_cols=40 Identities=8% Similarity=0.192 Sum_probs=31.0
Q ss_pred CCCCCCCHHHHHHHHHHHHcccCC-CchhHHHHHHhhhcccCC
Q 026481 79 HMPVIRDPEIQRAFKDLMAADWGE-LPASVIHDAKSALSRNND 120 (238)
Q Consensus 79 hlP~i~Dpei~~afKdLmA~sW~e-lp~svv~~ak~alSk~td 120 (238)
...+|+--+|++.++ ...+|.. +|++|.+-.|+...++++
T Consensus 122 ~~~~ISST~IR~~i~--~g~~i~~lVP~~V~~yI~e~~~~~~~ 162 (163)
T d1o6ba_ 122 QYSFLSSSIVKEVAR--YDGSVSEFVPPEVELALQQKFRQGGS 162 (163)
T ss_dssp TTTTCCHHHHHHHHH--TTCCCTTTSCHHHHHHHHHHHHSCSC
T ss_pred hhhccCHHHHHHHHH--cCCChHHhCCHHHHHHHHHHHhccCC
Confidence 345688899998765 3667888 599999999988877653
No 23
>d1xxxa1 c.1.10.1 (A:5-300) Dihydrodipicolinate synthase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=25.66 E-value=1.3e+02 Score=22.66 Aligned_cols=54 Identities=13% Similarity=0.095 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCCC----cCCchHHHHHHHHHHHH
Q 026481 125 QEVLKNVFSAAEAVEEFIGIIMNIKMEFDDEIGLSGENV----KPLSNELSSAIRTVYQR 180 (238)
Q Consensus 125 qeaL~nvfrAAeAvEeFgGiL~sLrmeiDDl~GlsGEnV----kPLPd~~~~Al~tay~r 180 (238)
++.-..++..-+++-.++|+ ..+|-.+ .+.|+.+-++ .||+++..++|+++.+.
T Consensus 234 ~~l~~~l~~l~~~~~~~~~~-~~~K~~l-~~~G~~~g~~R~Pl~~l~~e~~~~l~~~l~~ 291 (296)
T d1xxxa1 234 RKINIAVAPLCNAMSRLGGV-TLSKAGL-RLQGIDVGDPRLPQVAATPEQIDALAADMRA 291 (296)
T ss_dssp HHHHHHHHHHHHHHHHHCHH-HHHHHHH-HHTTCCCCCCCTTSCCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHccCCH-HHHHHHH-HHCCCCCCCcCCCCCCCCHHHHHHHHHHHHH
Confidence 33333444445566677764 4455544 7788866544 34778888888888765
No 24
>d1aopa3 d.134.1.1 (A:149-345) Sulfite reductase hemoprotein (SiRHP), domains 2 and 4 {Escherichia coli [TaxId: 562]}
Probab=25.47 E-value=23 Score=27.33 Aligned_cols=37 Identities=22% Similarity=0.416 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHH----------HHHH-hhcCCChhHHHHHHHHhhhhhhh
Q 026481 170 LSSAIRTVYQRY----------ATYL-DAFGPDESYLRKKVETELGSKMI 208 (238)
Q Consensus 170 ~~~Al~tay~rY----------~~YL-dsFgpdE~yLrKKVE~ELGtkmI 208 (238)
+..||-.+|.+| .+|| +..|.| ..|++||.+||-++-
T Consensus 137 v~~aI~~v~rd~G~R~nR~kaRlk~li~~~G~e--~Fr~~Ve~~~g~~l~ 184 (197)
T d1aopa3 137 VAEAVVTTQRDWGNRTDRKNAKTKYTLERVGVE--TFKAEVERRAGIKFE 184 (197)
T ss_dssp HHHHHHHHHHHHSCSSCSTTCSHHHHHHHHCHH--HHHHHHHHHHTCCCB
T ss_pred HHHHHHHHHHHhCCHhhccccchhhhHHhcCHH--HHHHHHHHHhCCccc
Confidence 445667777776 4554 888875 368899999997764
No 25
>d1v2da_ c.67.1.1 (A:) Glutamine aminotransferase {Thermus thermophilus [TaxId: 274]}
Probab=25.29 E-value=8.1 Score=29.62 Aligned_cols=47 Identities=26% Similarity=0.334 Sum_probs=30.9
Q ss_pred cCCC-CCCCcCCchHHHHHHHHHHHHHHHHHhhcCCChhHHHHHHHHhhh
Q 026481 156 IGLS-GENVKPLSNELSSAIRTVYQRYATYLDAFGPDESYLRKKVETELG 204 (238)
Q Consensus 156 ~Gls-GEnVkPLPd~~~~Al~tay~rY~~YLdsFgpdE~yLrKKVE~ELG 204 (238)
|-|+ |+..-|.|+.+.+|++.+-+++..|-+.-|-. =||+.+-..+|
T Consensus 28 I~ls~g~p~~~~p~~i~~al~~~l~~~~~Y~~~~G~~--elr~aiA~~~~ 75 (368)
T d1v2da_ 28 VNLGQGFPSNPPPPFLLEAVRRALGRQDQYAPPAGLP--ALREALAEEFA 75 (368)
T ss_dssp EECCCCSCSSCCCHHHHHHHHHHTTTSCSCCCTTCCH--HHHHHHHHHHT
T ss_pred EEecCCCCCCCCCHHHHHHHHHHhhcccCCCCCcCCH--HHHHHHHhhcc
Confidence 3443 56667889999999998877655454444433 37887765543
No 26
>d2j9ua1 a.24.28.1 (A:148-241) Vacuolar protein sorting-associated protein 28, VPS28 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=25.12 E-value=19 Score=25.89 Aligned_cols=21 Identities=29% Similarity=0.570 Sum_probs=18.5
Q ss_pred HHHHHHHHHHHHHHHHhhhhh
Q 026481 133 SAAEAVEEFIGIIMNIKMEFD 153 (238)
Q Consensus 133 rAAeAvEeFgGiL~sLrmeiD 153 (238)
-.||+++-|..++++||+.+-
T Consensus 5 ~Vae~~~~FIT~mDaLkL~~~ 25 (94)
T d2j9ua1 5 YVAEATGNFITVMDALKLNYN 25 (94)
T ss_dssp HHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHHhhcCc
Confidence 369999999999999999764
No 27
>d1t6ca1 c.55.1.8 (A:7-132) Exopolyphosphatase Ppx {Aquifex aeolicus [TaxId: 63363]}
Probab=25.06 E-value=35 Score=23.93 Aligned_cols=42 Identities=19% Similarity=0.335 Sum_probs=34.5
Q ss_pred cCCchHHHHHHHHHHHHHHHHHhhcCCCh---------------hHHHHHHHHhhhh
Q 026481 164 KPLSNELSSAIRTVYQRYATYLDAFGPDE---------------SYLRKKVETELGS 205 (238)
Q Consensus 164 kPLPd~~~~Al~tay~rY~~YLdsFgpdE---------------~yLrKKVE~ELGt 205 (238)
+.|+++..+.+-.+.++|...++.||+++ .++.++|+..+|-
T Consensus 47 g~ls~~~i~~~~~~l~~f~~~~~~~~v~~~~~vaTsA~R~A~N~~~~~~~i~~~tgi 103 (126)
T d1t6ca1 47 GRLQEDRIEETIQVLKEYKKLIDEFKVERVKAVATEAIRRAKNAEEFLERVKREVGL 103 (126)
T ss_dssp SSCCHHHHHHHHHHHHHHHHHHHHTTCSEEEEEECHHHHTSTTHHHHHHHHHHHTCC
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHhcCccceEEehhHHHHhCcCHHHHHHHHHHHHCC
Confidence 67999988889999999999999999875 4566677776664
No 28
>d1bh9b_ a.22.1.3 (B:) TAF(II)28 {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.87 E-value=41 Score=23.63 Aligned_cols=35 Identities=20% Similarity=0.492 Sum_probs=18.4
Q ss_pred HHHHHHHHhhhhhhccCCCCCCCcCCchHHHHHHHHHHHHHH
Q 026481 141 FIGIIMNIKMEFDDEIGLSGENVKPLSNELSSAIRTVYQRYA 182 (238)
Q Consensus 141 FgGiL~sLrmeiDDl~GlsGEnVkPLPd~~~~Al~tay~rY~ 182 (238)
|=|-|++.=.++-|--| +.+||..+| |+.||.||.
T Consensus 49 FvGEiVE~A~~V~~~~~----e~~PL~P~H---ireA~rrl~ 83 (89)
T d1bh9b_ 49 FVGEVVEEALDVCEKWG----EMPPLQPKH---MREAVRRLK 83 (89)
T ss_dssp HHHHHHHHHHHHHHHTT----CCSSCCHHH---HHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhc----cCCCCCcHH---HHHHHHHHH
Confidence 44544444444433332 368996555 455666664
No 29
>d1orna_ a.96.1.1 (A:) Endonuclease III {Escherichia coli [TaxId: 562]}
Probab=24.29 E-value=13 Score=28.34 Aligned_cols=72 Identities=11% Similarity=0.127 Sum_probs=0.0
Q ss_pred CCHHHHHHHHHHHHc--ccCCCchhHHHHHHhhhcccCCchhHHHHHHHHHHHHHH-HHHHHHHHHHHhhhhhhccCC
Q 026481 84 RDPEIQRAFKDLMAA--DWGELPASVIHDAKSALSRNNDDKAGQEVLKNVFSAAEA-VEEFIGIIMNIKMEFDDEIGL 158 (238)
Q Consensus 84 ~Dpei~~afKdLmA~--sW~elp~svv~~ak~alSk~tdDkAGqeaL~nvfrAAeA-vEeFgGiL~sLrmeiDDl~Gl 158 (238)
+|.-+.++++.|+.. +|.++-..-..++.+.+...+= .....+|..++|+. +|+|||.+-.-+.+|-.|=|+
T Consensus 44 ~~~~v~~~~~~l~~~~pt~~~la~~~~~e~~~~i~~~g~---y~~ka~~l~~~a~~i~~~~~g~vp~~~~~L~~LpGV 118 (214)
T d1orna_ 44 TDALVNKVTKRLFEKYRTPHDYIAVPLEELEQDIRSIGL---YRNKARNIQKLCAMLIDKYNGEVPRDRDELMKLPGV 118 (214)
T ss_dssp CHHHHHHHHHHHHHHCCSHHHHHSSCHHHHHHHTGGGSS---HHHHHHHHHHHHHHHHHHSTTSCCSCHHHHTTSTTC
T ss_pred hHHHHHHHHhhhhcccCchhhhhhccHHHhhhhhhhhhh---hhHHHHHHHHHhhhHHHHhCCCCCCCHHHHHhCcCc
No 30
>d1ryua_ a.4.3.1 (A:) SWI-SNF complex protein p270, SMARCF1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.26 E-value=22 Score=25.25 Aligned_cols=93 Identities=15% Similarity=0.249 Sum_probs=51.6
Q ss_pred ccccCCCCCCCCC-HH---HHHHHHHHHHcccCCCchhHHHHHHhhhcccCCchhHHHHHHHHHHHHHHHHHHHHH-HHH
Q 026481 73 FSEDVAHMPVIRD-PE---IQRAFKDLMAADWGELPASVIHDAKSALSRNNDDKAGQEVLKNVFSAAEAVEEFIGI-IMN 147 (238)
Q Consensus 73 fS~d~~hlP~i~D-pe---i~~afKdLmA~sW~elp~svv~~ak~alSk~tdDkAGqeaL~nvfrAAeAvEeFgGi-L~s 147 (238)
|.+-+..|=++.| || ....+.+.|..+...++.. --..|+++ |+|+-=.+|-++||- -|+
T Consensus 5 ~~~~~~~L~e~~~~~e~~~Fl~~L~~F~~~rg~~~~~~-------------P~i~gr~v--DL~~Ly~~V~~~GG~~~V~ 69 (120)
T d1ryua_ 5 TNEKITKLYELGGEPERKMWVDRYLAFTEEKAMGMTNL-------------PAVGRKPL--DLYRLYVSVKEIGGLTQVN 69 (120)
T ss_dssp CSCCCCGGGCSSSCHHHHHHHHHHHHHHHHTTSCSSCC-------------SCCSSSSC--CHHHHHHHHHHHTCTTGGG
T ss_pred hhHHHHHHHccCCcHHHHHHHHHHHHHHHHCCCCCCcC-------------CeECCeec--cHHHHHHHHHHhcCHHhhc
Confidence 4444555555553 33 3445566666666655211 11334443 678888899999993 222
Q ss_pred Hh---hhhhhccCCCCCCCcCCchHHHHHHHHHHHHHHHHHhhcC
Q 026481 148 IK---MEFDDEIGLSGENVKPLSNELSSAIRTVYQRYATYLDAFG 189 (238)
Q Consensus 148 Lr---meiDDl~GlsGEnVkPLPd~~~~Al~tay~rY~~YLdsFg 189 (238)
-+ .+|-+.+|+. + ......+|++.|.|| |..|+
T Consensus 70 ~~~~W~~Va~~l~~~-----~-~~~~~~~Lk~~Y~r~---L~~yE 105 (120)
T d1ryua_ 70 KNKKWRELATNLNVG-----T-SSSAASSLKKQYIQC---LYAFE 105 (120)
T ss_dssp TSSHHHHHHHHTTSC-----C-SSHHHHHHHHHHHHH---TTTTT
T ss_pred ccchHHHHHHHhCCC-----C-CCCHHHHHHHHHHHH---HHHHH
Confidence 22 3444555542 2 224567888887765 77664
No 31
>d2g7sa2 a.121.1.1 (A:77-192) Putative transcriptional regulator Atu0279 {Agrobacterium tumefaciens [TaxId: 358]}
Probab=24.25 E-value=16 Score=24.03 Aligned_cols=29 Identities=14% Similarity=0.329 Sum_probs=23.0
Q ss_pred CCCCCcCCchHHHHHHHHHHHHHHHHHhh
Q 026481 159 SGENVKPLSNELSSAIRTVYQRYATYLDA 187 (238)
Q Consensus 159 sGEnVkPLPd~~~~Al~tay~rY~~YLds 187 (238)
..-+..++|+.+..+++..|++..++|..
T Consensus 31 ~a~E~~~~~~~v~~~~~~~~~~~~~~l~~ 59 (116)
T d2g7sa2 31 LASEIPVLPETVVLEVRAHFRSLSDWLTA 59 (116)
T ss_dssp HHTTGGGSCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhhccCCHHHHHHHHHHHHHHHHHHHH
Confidence 34445678999999999999998887753
No 32
>d1bxni_ d.73.1.1 (I:) Ribulose 1,5-bisphosphate carboxylase-oxygenase {Alcaligenes eutrophus [TaxId: 106590]}
Probab=23.54 E-value=25 Score=26.30 Aligned_cols=45 Identities=16% Similarity=0.403 Sum_probs=35.0
Q ss_pred cCCCCCCCCCHHHHHHHHHHHHcccC-------------------CC-------chhHHHHHHhhhcccCC
Q 026481 76 DVAHMPVIRDPEIQRAFKDLMAADWG-------------------EL-------PASVIHDAKSALSRNND 120 (238)
Q Consensus 76 d~~hlP~i~Dpei~~afKdLmA~sW~-------------------el-------p~svv~~ak~alSk~td 120 (238)
..+-||+++|-+|.+-+..|++-.|. .| ++.|+.+++.|++...+
T Consensus 7 tfSyLP~Ltd~~I~~QV~yll~qG~~i~iE~ad~r~~r~~yW~mw~lPmf~~~d~~~Vl~ele~c~~e~p~ 77 (129)
T d1bxni_ 7 TFSFLPELTDEQITKQLEYCLNQGWAVGLEYTDDPHPRNTYWEMFGLPMFDLRDAAGILMEINNARNTFPN 77 (129)
T ss_dssp BTTTSSCCCHHHHHHHHHHHHHHTCEEEEEEESCCCTTCCCCEESSSCBTTCCCHHHHHHHHHHHHHHCSS
T ss_pred eeccCCCCCHHHHHHHHHHHHHCCCEeeEEEecCcCcccchhhccccccccCCCHHHHHHHHHHHHHHCCc
Confidence 45689999999999999999987653 45 36777777777776544
No 33
>d1k0wa_ c.74.1.1 (A:) L-ribulose-5-phosphate 4-epimerase {Escherichia coli [TaxId: 562]}
Probab=23.46 E-value=60 Score=22.72 Aligned_cols=36 Identities=11% Similarity=0.082 Sum_probs=20.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCCCcCCchHHH
Q 026481 128 LKNVFSAAEAVEEFIGIIMNIKMEFDDEIGLSGENVKPLSNELS 171 (238)
Q Consensus 128 L~nvfrAAeAvEeFgGiL~sLrmeiDDl~GlsGEnVkPLPd~~~ 171 (238)
++.+|..++.+|+.-=+...-++ .|..+.++|+++.
T Consensus 180 ~~eA~~~~~~lE~~a~~~~~a~~--------~g~~~~~~~~e~~ 215 (223)
T d1k0wa_ 180 AEDAVHNAIVLEEVAYMGIFCRQ--------LAPQLPDMQQTLL 215 (223)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH--------HCTTCCCCCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH--------cCCCCCCCCHHHH
Confidence 45566666666665443322222 1666778887764
No 34
>d1li5a1 a.27.1.1 (A:316-402) Cysteinyl-tRNA synthetase (CysRS) {Escherichia coli [TaxId: 562]}
Probab=23.37 E-value=90 Score=20.09 Aligned_cols=13 Identities=15% Similarity=0.332 Sum_probs=9.5
Q ss_pred hhhhhccCCCCCC
Q 026481 150 MEFDDEIGLSGEN 162 (238)
Q Consensus 150 meiDDl~GlsGEn 162 (238)
.++.+++|+-+++
T Consensus 70 ~~~~~vLGll~~~ 82 (87)
T d1li5a1 70 RKLSAVLGLLEQE 82 (87)
T ss_dssp HHHHTTTTCSCSC
T ss_pred HHHHhHcCCCCCC
Confidence 4678888887764
No 35
>d1v72a1 c.67.1.1 (A:6-350) Phenylserine aldolase PSALD {Pseudomonas putida [TaxId: 303]}
Probab=23.34 E-value=15 Score=25.89 Aligned_cols=44 Identities=23% Similarity=0.371 Sum_probs=28.3
Q ss_pred ccCCCCCCCcCCchHHHHHHHHHHHHHHHHHhhcCCChhH--HHHHHHH
Q 026481 155 EIGLSGENVKPLSNELSSAIRTVYQRYATYLDAFGPDESY--LRKKVET 201 (238)
Q Consensus 155 l~GlsGEnVkPLPd~~~~Al~tay~rY~~YLdsFgpdE~y--LrKKVE~ 201 (238)
+.+..-+|+.|+.+++.+|+..+- ..+...+|+++.. ||+++-.
T Consensus 4 ~~~f~s~n~~g~~P~v~~A~~~a~---~~~~~~~~~~~~~~~l~~~la~ 49 (345)
T d1v72a1 4 ALGFSSDNIAGASPEVAQALVKHS---SGQAGPYGTDELTAQVKRKFCE 49 (345)
T ss_dssp CCBCSCGGGCCCCHHHHHHHHHTT---SSCCCSTTCSHHHHHHHHHHHH
T ss_pred CcCcCCCCCCCCCHHHHHHHHHHh---ccCccccCCCHHHHHHHHHHHH
Confidence 456677899998888888876542 2345556777654 4444433
No 36
>d1ig6a_ a.4.3.1 (A:) MRF-2 DNA-binding domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.09 E-value=21 Score=24.73 Aligned_cols=84 Identities=15% Similarity=0.200 Sum_probs=48.6
Q ss_pred HHHHHHHHHHcccCCCchhHHHHHHhhhcccCCchhHHHHHHHHHHHHHHHHHHHH--HHHH--HhhhhhhccCCCCCCC
Q 026481 88 IQRAFKDLMAADWGELPASVIHDAKSALSRNNDDKAGQEVLKNVFSAAEAVEEFIG--IIMN--IKMEFDDEIGLSGENV 163 (238)
Q Consensus 88 i~~afKdLmA~sW~elp~svv~~ak~alSk~tdDkAGqeaL~nvfrAAeAvEeFgG--iL~s--LrmeiDDl~GlsGEnV 163 (238)
....+.+.|+.....++..- -..|+. -|.|+-=.+|.++|| .+.. .=.+|-..+|+.-.+
T Consensus 7 Fl~~L~~F~~~rg~~~~~~P-------------~i~gk~--vDL~~Ly~~V~~~GG~~~V~~~~~W~~ia~~lg~~~~~- 70 (107)
T d1ig6a_ 7 FLVALYKYMKERKTPIERIP-------------YLGFKQ--INLWTMFQAAQKLGGYETITARRQWKHIYDELGGNPGS- 70 (107)
T ss_dssp HHHHHHHHHHTTTCCGGGCC-------------CSSSSS--CCHHHHHHHHHHTTHHHHHHHHTTHHHHHHHHTCCTTC-
T ss_pred HHHHHHHHHHHcCCCCCcCC-------------eECCcc--ccHHHHHHHHHHhCChhhccccccHHHHHHHhCCCCCC-
Confidence 34556666776665543211 123333 267888889999999 3332 234666677763222
Q ss_pred cCCchHHHHHHHHHHHHHHHHHhhcCCChhHHHH
Q 026481 164 KPLSNELSSAIRTVYQRYATYLDAFGPDESYLRK 197 (238)
Q Consensus 164 kPLPd~~~~Al~tay~rY~~YLdsFgpdE~yLrK 197 (238)
.....+|++.|.|| |..| |.|++.
T Consensus 71 ----~~~~~~Lk~~Y~~~---L~~y---E~~~~~ 94 (107)
T d1ig6a_ 71 ----TSAATCTRRHYERL---ILPY---ERFIKG 94 (107)
T ss_dssp ----TTTTTTHHHHHHHH---TTTT---HHHHHH
T ss_pred ----CCHHHHHHHHHHHH---HHHH---HHHHhc
Confidence 12346788777665 7777 566654
No 37
>d1o04a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Human (Homo sapiens), mitochondrial [TaxId: 9606]}
Probab=22.95 E-value=12 Score=31.45 Aligned_cols=87 Identities=16% Similarity=0.181 Sum_probs=54.3
Q ss_pred ccCCCCCCCCCHHHHHHHHHHHHc-----ccCCCchh----HHHHHHhhhcccCCchhHHHHHHHHHHHHHH-HHHHHHH
Q 026481 75 EDVAHMPVIRDPEIQRAFKDLMAA-----DWGELPAS----VIHDAKSALSRNNDDKAGQEVLKNVFSAAEA-VEEFIGI 144 (238)
Q Consensus 75 ~d~~hlP~i~Dpei~~afKdLmA~-----sW~elp~s----vv~~ak~alSk~tdDkAGqeaL~nvfrAAeA-vEeFgGi 144 (238)
+.+..+|.-+..||..|++.--++ .|..+|.. ++..+...|.++.|+.+--+.++.=--..++ .+|....
T Consensus 40 ~~i~~v~~a~~~dv~~Av~aA~~Af~~~~~W~~~~~~eRa~iL~~~a~~l~~~~eela~~~~~E~GK~~~ea~~~ev~~~ 119 (494)
T d1o04a_ 40 EVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMV 119 (494)
T ss_dssp EEEEEEECBCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHH
T ss_pred CEEEEEeCCCHHHHHHHHHHHHHHHhccchhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCcchhhhhhhHHHHH
Confidence 456678888999999988765554 59999875 7777777888877776655554442112233 2344555
Q ss_pred HHHHhhhhhhccCCCCC
Q 026481 145 IMNIKMEFDDEIGLSGE 161 (238)
Q Consensus 145 L~sLrmeiDDl~GlsGE 161 (238)
+..++.-.+..-.+.||
T Consensus 120 ~~~~~~~a~~~~~~~~~ 136 (494)
T d1o04a_ 120 LKCLRYYAGWADKYHGK 136 (494)
T ss_dssp HHHHHHHHHHTTTCCEE
T ss_pred HHHHHHHHHHHHHhcCc
Confidence 55555544444444443
No 38
>d1f5na1 a.114.1.1 (A:284-583) Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.49 E-value=1.3e+02 Score=21.62 Aligned_cols=45 Identities=13% Similarity=0.140 Sum_probs=31.6
Q ss_pred CchHHHHHHHHHHHHHHHHHhhcCCChhHHHHHHHHhhhhhhhhhhh
Q 026481 166 LSNELSSAIRTVYQRYATYLDAFGPDESYLRKKVETELGSKMIFLKM 212 (238)
Q Consensus 166 LPd~~~~Al~tay~rY~~YLdsFgpdE~yLrKKVE~ELGtkmI~LKm 212 (238)
|-+.|..++..+.+-|.. .+||.+..=.++++...+..+.-.+++
T Consensus 70 l~~~h~~~~~~a~~~f~~--~~~~~~~~~~~~~L~~~l~~~~~~~~~ 114 (300)
T d1f5na1 70 LLDLHRDSEREAIEVFIR--SSFKDVDHLFQKELAAQLEKKRDDFCK 114 (300)
T ss_dssp HHHHHHHHHHHHHHHHHH--HCCCCGGGHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH--hcchhhHHHHHHHHHHHHHHHHHHHHH
Confidence 344566777777777764 689987776777777777777766644
No 39
>d1g8qa_ a.135.1.1 (A:) CD81 extracellular domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.48 E-value=86 Score=21.56 Aligned_cols=45 Identities=13% Similarity=0.360 Sum_probs=32.6
Q ss_pred chHHHHHHHHHHHH-HHHHHhhcCCChhHHHHHHHHhhhhhhhhhhhhhcCCCC
Q 026481 167 SNELSSAIRTVYQR-YATYLDAFGPDESYLRKKVETELGSKMIFLKMRCAGLGS 219 (238)
Q Consensus 167 Pd~~~~Al~tay~r-Y~~YLdsFgpdE~yLrKKVE~ELGtkmI~LKmRcsGlgs 219 (238)
.|++.+.|.+.|+- |..|+. .++..-+|.-+ ++||-=.-|+|.+.
T Consensus 4 kd~V~~ev~~FY~~~Y~~y~~--~~~~~~~k~tL------k~fH~~L~CCG~~~ 49 (90)
T d1g8qa_ 4 KDQIAKDVKQFYDQALQQAVV--DDDANNAKAVV------KTFHETLDCCGSST 49 (90)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH--CTTCHHHHHHH------HHHHHHHTCCSCTT
T ss_pred hhHHHHHHHHHHHHHHHHHhh--cCCcchHHHHH------HHHHHHHccCCCCC
Confidence 36777888888877 888876 34444454422 58999999999886
No 40
>d2r5ea1 c.67.1.1 (A:12-429) Kynurenine--oxoglutarate transaminase I {Yellowfever mosquito (Aedes aegypti) [TaxId: 7159]}
Probab=22.39 E-value=20 Score=28.20 Aligned_cols=50 Identities=8% Similarity=-0.003 Sum_probs=32.8
Q ss_pred hccCCC-CCCCcCCchHHHHHHHHHHHHHHHHHhhcCCChhH--HHHHHHHhh
Q 026481 154 DEIGLS-GENVKPLSNELSSAIRTVYQRYATYLDAFGPDESY--LRKKVETEL 203 (238)
Q Consensus 154 Dl~Gls-GEnVkPLPd~~~~Al~tay~rY~~YLdsFgpdE~y--LrKKVE~EL 203 (238)
|.|.|+ |+.--|-|+.+.+|++.+-+.....+..++|.+.+ ||+.|-..+
T Consensus 27 ~~I~L~~G~Pd~~~p~~i~eal~~a~~~~~~~~~~Y~~~~G~~~lReaiA~~~ 79 (418)
T d2r5ea1 27 KPLNLGQGFPDYHAPKYALNALAAAANSPDPLANQYTRGFGHPRLVQALSKLY 79 (418)
T ss_dssp CCEECSSSCCSSCCCHHHHHHHHHHHTCSCGGGGSCCCTTCCHHHHHHHHHHH
T ss_pred CCEEccCCCCCCCCCHHHHHHHHHHHhCCCccCcCCCCCCCCHHHHHHHHHHH
Confidence 445555 55445678999999998876554444556676654 677776543
No 41
>d1i60a_ c.1.15.4 (A:) Hypothetical protein IolI {Bacillus subtilis [TaxId: 1423]}
Probab=22.30 E-value=76 Score=22.92 Aligned_cols=62 Identities=13% Similarity=0.140 Sum_probs=41.0
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCCCcCCchHHHHHHHHHHHHHHHHHhhcC
Q 026481 120 DDKAGQEVLKNVFSAAEAVEEFIGIIMNIKMEFDDEIGLSGENVKPLSNELSSAIRTVYQRYATYLDAFG 189 (238)
Q Consensus 120 dDkAGqeaL~nvfrAAeAvEeFgGiL~sLrmeiDDl~GlsGEnVkPLPd~~~~Al~tay~rY~~YLdsFg 189 (238)
|+..-+++++.+-++.+++-++|...+ .+.-.+.+-.+-+++..+.+...+++-..|.+.+|
T Consensus 75 ~~~~~~~~~~~~~~~i~~a~~lG~~~i--------~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~G 136 (278)
T d1i60a_ 75 DEKGHNEIITEFKGMMETCKTLGVKYV--------VAVPLVTEQKIVKEEIKKSSVDVLTELSDIAEPYG 136 (278)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHTCCEE--------EEECCBCSSCCCHHHHHHHHHHHHHHHHHHHGGGT
T ss_pred CHHHHHHHHHHHHHHHHHHHHcCCCcc--------ccccccCCCCCCHHHHHHHHHHHHHHHHHHHHHhC
Confidence 333446778888888899988887432 12222334444455666677777889899998877
No 42
>d1zoda1 c.67.1.4 (A:3-433) Dialkylglycine decarboxylase {Pseudomonas cepacia [TaxId: 292]}
Probab=21.43 E-value=1.2e+02 Score=24.17 Aligned_cols=60 Identities=20% Similarity=0.157 Sum_probs=42.9
Q ss_pred cCCCCCCCCCHHHHHHHHHHHHccc----CCCchhHHHHHHhhhccc--CCc-----hhHHHHHHHHHHHHHHHH
Q 026481 76 DVAHMPVIRDPEIQRAFKDLMAADW----GELPASVIHDAKSALSRN--NDD-----KAGQEVLKNVFSAAEAVE 139 (238)
Q Consensus 76 d~~hlP~i~Dpei~~afKdLmA~sW----~elp~svv~~ak~alSk~--tdD-----kAGqeaL~nvfrAAeAvE 139 (238)
.++| .+|+|.+|+++-+..-+ .-+.+..++-|++-+... .-| ..|-||.+++.|.|++..
T Consensus 54 ~lGh----~~p~v~~ai~~q~~~~~~~~~~~~~~~~~~la~~L~~~~~~~~~~v~f~~sGseA~e~Alk~Ar~~t 124 (431)
T d1zoda1 54 VLGH----CHPEIVSVIGEYAGKLDHLFSEMLSRPVVDLATRLANITPPGLDRALLLSTGAESNEAAIRMAKLVT 124 (431)
T ss_dssp TTCB----TCHHHHHHHHHHHHHCCCCCTTCCCHHHHHHHHHHHHHSCTTCCEEEEESCHHHHHHHHHHHHHHHH
T ss_pred hhcC----CCHHHHHHHHHHHhhccccccccccHHHHHHHHHHHHhCCcccceeeecccccchHHHHHHHHHHhc
Confidence 4556 68999999999887544 234566666677655432 223 469999999999999885
No 43
>d1uk5a_ a.7.7.1 (A:) BAG-family molecular chaperone regulator-3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=21.22 E-value=54 Score=23.59 Aligned_cols=37 Identities=16% Similarity=0.147 Sum_probs=20.4
Q ss_pred HHHHHhhhhhhccCCCCCCCcCCchHHHHHHHHH---HHHHHHHHhh
Q 026481 144 IIMNIKMEFDDEIGLSGENVKPLSNELSSAIRTV---YQRYATYLDA 187 (238)
Q Consensus 144 iL~sLrmeiDDl~GlsGEnVkPLPd~~~~Al~ta---y~rY~~YLds 187 (238)
+|+.+...||.+- -.|+ +.+..|=+.+ -|.|.++||.
T Consensus 64 ~L~~~LlkLD~Ie-~~G~------~~vR~~RK~~vk~vQ~~l~~LD~ 103 (111)
T d1uk5a_ 64 YLTKELLALDSVD-PEGR------ADVRQARRDGVRKVQTILEKLEQ 103 (111)
T ss_dssp HHHHHHHHHHSCC-CSSC------HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCcc-cCCC------HHHHHHHHHHHHHHHHHHHHHHh
Confidence 6888888888653 2222 2333333333 3556666664
No 44
>d1mxra_ a.25.1.2 (A:) Ribonucleotide reductase R2 {Escherichia coli [TaxId: 562]}
Probab=21.14 E-value=1.8e+02 Score=22.74 Aligned_cols=108 Identities=9% Similarity=0.066 Sum_probs=70.7
Q ss_pred ccccccCCCCC---CCCCHHHHHHHHHHHHcccCCCchhHHHHHHhhhcccCCchhHHHHHHHHHHHHHHHHHHHHH-HH
Q 026481 71 RSFSEDVAHMP---VIRDPEIQRAFKDLMAADWGELPASVIHDAKSALSRNNDDKAGQEVLKNVFSAAEAVEEFIGI-IM 146 (238)
Q Consensus 71 R~fS~d~~hlP---~i~Dpei~~afKdLmA~sW~elp~svv~~ak~alSk~tdDkAGqeaL~nvfrAAeAvEeFgGi-L~ 146 (238)
+.|-.+.+++. .++=|++.+-.|..++.-|..=.=++-+|++.= ++-+ ..-|+++++++..--+.++.-+. +.
T Consensus 16 ~~~~g~~~~~~~~~~~ky~~~~~ly~~~~~~fW~p~Ei~ls~D~~dw-~~L~--~~Ek~~~~~~l~~f~~~D~~v~~~~~ 92 (339)
T d1mxra_ 16 PMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDY-QALP--EHEKHIFISNLKYQTLLDSIQGRSPN 92 (339)
T ss_dssp CSBSSSCCCSCCCSCCSCHHHHHHHHHHHHTCCCGGGSCCTTHHHHH-HTSC--HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccCCCCCcccCCccccHHHHHHHHHHHhCCCCcccccchhhHHHH-HHCC--HHHHHHHHHHHHHHHHhhHHHhcccH
Confidence 45555555544 778999999999999999975544555666653 3333 34499999998776666654442 21
Q ss_pred -HHhhhhhhccCCCCCCCcCCchH-----HHHHHHHHHHH-HHHHHhhcCCChh
Q 026481 147 -NIKMEFDDEIGLSGENVKPLSNE-----LSSAIRTVYQR-YATYLDAFGPDES 193 (238)
Q Consensus 147 -sLrmeiDDl~GlsGEnVkPLPd~-----~~~Al~tay~r-Y~~YLdsFgpdE~ 193 (238)
.+... -+.|+. .+-+.+++|.+ |..+|++++.++.
T Consensus 93 ~~~~~~------------~~~pE~~~~~~~q~~~E~iH~~sYs~il~~l~~d~~ 134 (339)
T d1mxra_ 93 VALLPL------------ISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPS 134 (339)
T ss_dssp HHTGGG------------BCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSCHH
T ss_pred HHHHHh------------cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchH
Confidence 22222 233443 34556777766 8999999998753
No 45
>d1ky8a_ c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN {Archaeon Thermoproteus tenax [TaxId: 2271]}
Probab=20.83 E-value=28 Score=28.87 Aligned_cols=75 Identities=20% Similarity=0.262 Sum_probs=43.1
Q ss_pred cCCCCCCCCCHHHHHHHHHHHHc---ccCCCch----hHHHHHHhhhcccCCchhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 026481 76 DVAHMPVIRDPEIQRAFKDLMAA---DWGELPA----SVIHDAKSALSRNNDDKAGQEVLKNVFSAAEAVEEFIGIIMNI 148 (238)
Q Consensus 76 d~~hlP~i~Dpei~~afKdLmA~---sW~elp~----svv~~ak~alSk~tdDkAGqeaL~nvfrAAeAvEeFgGiL~sL 148 (238)
-+.++|.....||..|++..-++ +|..+|. ++...+...|.++.|+.+--..++-=--..+|..|+...+..+
T Consensus 42 ~i~~v~~a~~~dv~~Av~~A~~a~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~etGk~~~~a~~Ev~~~i~~~ 121 (499)
T d1ky8a_ 42 TIAKVISPSREEVERTLDVLFKRGRWSARDMPGTERLAVLRKAADIIERNLDVFAEVLVMNAGKPKSAAVGEVKAAVDRL 121 (499)
T ss_dssp EEEEEECCCHHHHHHHHHHHHHTHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
T ss_pred EEEEEeCCCHHHHHHHHHHHHHhchhhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhhhhhcccccc
Confidence 45677888888888777544322 6878876 4666667777777666554444332111233334455555444
Q ss_pred hh
Q 026481 149 KM 150 (238)
Q Consensus 149 rm 150 (238)
+-
T Consensus 122 ~~ 123 (499)
T d1ky8a_ 122 RL 123 (499)
T ss_dssp HG
T ss_pred cc
Confidence 43
No 46
>d1ojra_ c.74.1.1 (A:) L-rhamnulose-1-phosphate aldolase {Escherichia coli [TaxId: 562]}
Probab=20.29 E-value=1e+02 Score=23.81 Aligned_cols=44 Identities=16% Similarity=0.259 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCCCcCCchHHHHHHHHHH
Q 026481 127 VLKNVFSAAEAVEEFIGIIMNIKMEFDDEIGLSGENVKPLSNELSSAIRTVY 178 (238)
Q Consensus 127 aL~nvfrAAeAvEeFgGiL~sLrmeiDDl~GlsGEnVkPLPd~~~~Al~tay 178 (238)
-++++|..+|.+|+.--+....+. .|.+..+||++-.++|+..|
T Consensus 220 sl~eA~~~~e~lE~~A~i~l~a~~--------~G~~~~~l~~eei~~l~~~f 263 (274)
T d1ojra_ 220 TLDETFGLIDTAEKSAQVLVKVYS--------MGGMKQTISREELIALGKRF 263 (274)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHH--------TTCCSSCCCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHh--------cCCCCCCCCHHHHHHHHHHH
Confidence 367788889999998886665553 36667899998888877655
No 47
>d2qfka1 a.1.1.2 (A:1-137) Dehaloperoxidase {Amphitrite ornata [TaxId: 129555]}
Probab=20.21 E-value=27 Score=24.45 Aligned_cols=20 Identities=15% Similarity=0.076 Sum_probs=14.9
Q ss_pred HHHHHHHHHHHHHHHHhhcC
Q 026481 170 LSSAIRTVYQRYATYLDAFG 189 (238)
Q Consensus 170 ~~~Al~tay~rY~~YLdsFg 189 (238)
...|-+..|+.-++=|.+.|
T Consensus 116 ~~~AW~k~~~~i~~~l~sag 135 (137)
T d2qfka1 116 DSQSWDRFGKNLVSALSSAG 135 (137)
T ss_dssp CHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHhcc
Confidence 35688888888887777665
Done!