Query 026491
Match_columns 238
No_of_seqs 125 out of 1263
Neff 8.2
Searched_HMMs 13730
Date Mon Mar 25 14:49:53 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026491.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/026491hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1q90g_ f.23.26.1 (G:) PetG su 11.4 96 0.007 15.0 2.5 17 47-63 6-22 (30)
2 d1ttka_ g.3.6.1 (A:) Conotoxin 10.7 31 0.0022 16.0 0.3 6 1-6 12-17 (26)
3 d1jb0l_ f.31.1.1 (L:) Photosys 6.5 2.4E+02 0.018 19.2 3.7 23 212-234 123-146 (151)
4 d2a65a1 f.54.1.1 (A:5-513) Na( 5.6 6.4E+02 0.047 19.9 21.6 110 20-131 6-119 (509)
5 d1qnta1 a.4.2.1 (A:92-176) O6- 5.4 1.9E+02 0.014 17.5 2.5 21 78-99 17-37 (85)
6 d1dlja2 c.2.1.6 (A:1-196) UDP- 5.1 69 0.0051 22.3 0.0 13 31-43 4-16 (196)
7 d2dsxa1 g.41.5.1 (A:1-52) Rubr 4.7 1.2E+02 0.009 16.8 1.0 15 3-17 8-22 (52)
8 d1brfa_ g.41.5.1 (A:) Rubredox 4.5 1.2E+02 0.0087 17.0 0.8 15 3-17 7-21 (53)
9 d2r6gf1 e.70.1.1 (F:13-260) Ma 4.4 5.4E+02 0.039 18.6 5.0 28 36-64 15-42 (248)
10 d1mv8a2 c.2.1.6 (A:1-202) GDP- 4.4 81 0.0059 22.2 -0.1 13 31-43 4-16 (202)
No 1
>d1q90g_ f.23.26.1 (G:) PetG subunit of the cytochrome b6f complex {Chlamydomonas reinhardtii [TaxId: 3055]}
Probab=11.43 E-value=96 Score=14.99 Aligned_cols=17 Identities=29% Similarity=0.442 Sum_probs=12.1
Q ss_pred hhhhHHHHHHHHHHHHH
Q 026491 47 PLGWIAGVVGLIIATIV 63 (238)
Q Consensus 47 ~~G~~~G~i~l~~~~~~ 63 (238)
-+|++.|.+-+.+.+.+
T Consensus 6 l~GivlGlipiTl~Glf 22 (30)
T d1q90g_ 6 LCGIVLGLVPVTIAGLF 22 (30)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHhHHHhhHHHHHHHHH
Confidence 36788888877777654
No 2
>d1ttka_ g.3.6.1 (A:) Conotoxin {Sea snail (Conus magus), M VIIa [TaxId: 6492]}
Probab=10.75 E-value=31 Score=16.03 Aligned_cols=6 Identities=67% Similarity=1.685 Sum_probs=3.7
Q ss_pred Cccccc
Q 026491 1 MYYCCY 6 (238)
Q Consensus 1 ~~~~~~ 6 (238)
||-||-
T Consensus 12 mydcct 17 (26)
T d1ttka_ 12 MYDCCT 17 (26)
T ss_dssp TCCCTT
T ss_pred HHHhcc
Confidence 566764
No 3
>d1jb0l_ f.31.1.1 (L:) Photosystem I reaction center subunit XI, PsaL {Synechococcus elongatus [TaxId: 32046]}
Probab=6.53 E-value=2.4e+02 Score=19.19 Aligned_cols=23 Identities=17% Similarity=0.114 Sum_probs=15.2
Q ss_pred HhHHHHHHHHhc-cCchhhhhhcc
Q 026491 212 IGACANLVFAFN-TGMLPEIQVRE 234 (238)
Q Consensus 212 ~~a~gi~~Fafg-~~v~p~I~~~M 234 (238)
+.++|-.+|||- ...++-++.-|
T Consensus 123 ~Gg~GGa~fAy~Ll~n~~~~d~i~ 146 (151)
T d1jb0l_ 123 VGAMGSAFVAFFLLENFLVVDGIM 146 (151)
T ss_dssp HHHHHHHHHHHHHHHTHHHHHHHH
T ss_pred hccccHHHHHHHHHcchHHHHHHH
Confidence 467888999995 45555555444
No 4
>d2a65a1 f.54.1.1 (A:5-513) Na(+):neurotransmitter symporter homologue LeuT {Aquifex aeolicus [TaxId: 63363]}
Probab=5.58 E-value=6.4e+02 Score=19.86 Aligned_cols=110 Identities=8% Similarity=0.044 Sum_probs=63.8
Q ss_pred hhHHHHHHHHhhhhhhh-hhhhhHHhhhhhhhH---HHHHHHHHHHHHHHHHHHHHHhccccCCcccCcHHHHHHHHcCc
Q 026491 20 SWFQVGFVLTTGINSAY-VLGYPGTVMVPLGWI---AGVVGLIIATIVSLNANALIAKLHEFGGKRHIRYRDLAGHIYGR 95 (238)
Q Consensus 20 s~~~a~~~l~~~~iG~G-iLalP~a~~~~~G~~---~G~i~l~~~~~~~~yt~~lL~~~~~~~~~~~~sY~~l~~~~~G~ 95 (238)
+..+-.+..+...+|.| +.=.|+-+.++.|.. +=.+++++.+.=..+--..+.+... .+ ....++.+.....+.
T Consensus 6 s~~~fila~~g~avGlGNiWrFPyl~~~nGGgaFlipY~~~l~l~gvPll~lE~~lGq~~~-~g-~i~~~~~i~~~~~~~ 83 (509)
T d2a65a1 6 TRLGLILAMAGNAVGLGNFLRFPVQAAENGGGAFMIPYIIAFLLVGIPLMWIEWAMGRYGG-AQ-GHGTTPAIFYLLWRN 83 (509)
T ss_dssp CHHHHHHHHHHHHSSHHHHTHHHHHHHHTTTHHHHHHHHHHHHHTHHHHHHHHHHHHHHHH-TT-TCCSHHHHHHHHSCS
T ss_pred ChHHHHHHHHHHHhcccHHHhhhHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHcCCCC-CC-cccHHHHHHHHhccC
Confidence 44555666777888886 455898745666632 1112222222222222233333322 12 245788888776654
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 026491 96 RAYALTWGLQYVNLFMINTGYIILAGQALKAAFVLF 131 (238)
Q Consensus 96 ~~~~~v~~~~~i~~~g~~v~yli~~~~~l~~~~~~~ 131 (238)
+.-..+.....+.++..++-|.+..+..+.-.++.+
T Consensus 84 ~~~~giG~~~~~~~~~i~~yy~vi~~w~l~Y~~~s~ 119 (509)
T d2a65a1 84 RFAKILGVFGLWIPLVVAIYYVYIESWTLGFAIKFL 119 (509)
T ss_dssp HHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cchhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 443455666777778888889999888887666554
No 5
>d1qnta1 a.4.2.1 (A:92-176) O6-alkylguanine-DNA alkyltransferase {Human (Homo sapiens) [TaxId: 9606]}
Probab=5.43 E-value=1.9e+02 Score=17.52 Aligned_cols=21 Identities=29% Similarity=0.265 Sum_probs=14.4
Q ss_pred CCcccCcHHHHHHHHcCccchh
Q 026491 78 GGKRHIRYRDLAGHIYGRRAYA 99 (238)
Q Consensus 78 ~~~~~~sY~~l~~~~~G~~~~~ 99 (238)
.|+ ..||.|+|+.+--|+...
T Consensus 17 ~G~-v~TYg~iA~~~g~p~aaR 37 (85)
T d1qnta1 17 FGE-VISYQQLAALAGNPKAAR 37 (85)
T ss_dssp TTC-CEEHHHHHHHTTCTTCHH
T ss_pred CCC-cccHHHHHHHcCCcchHH
Confidence 344 579999999865555533
No 6
>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]}
Probab=5.07 E-value=69 Score=22.35 Aligned_cols=13 Identities=8% Similarity=0.079 Sum_probs=10.4
Q ss_pred hhhhhhhhhhhHH
Q 026491 31 GINSAYVLGYPGT 43 (238)
Q Consensus 31 ~~iG~GiLalP~a 43 (238)
+++|.|-+++|.|
T Consensus 4 ~ViGlG~vGl~~a 16 (196)
T d1dlja2 4 AVAGSGYVGLSLG 16 (196)
T ss_dssp EEECCSHHHHHHH
T ss_pred EEECCChhHHHHH
Confidence 4678888888876
No 7
>d2dsxa1 g.41.5.1 (A:1-52) Rubredoxin {Desulfovibrio gigas [TaxId: 879]}
Probab=4.72 E-value=1.2e+02 Score=16.79 Aligned_cols=15 Identities=13% Similarity=0.047 Sum_probs=11.1
Q ss_pred cccccccCCCccccc
Q 026491 3 YCCYVSSSYFFHLEM 17 (238)
Q Consensus 3 ~~~~~~~~~~~~~~~ 17 (238)
-|.|+..+..|+++.
T Consensus 8 ~CgyiYdp~~Gd~~~ 22 (52)
T d2dsxa1 8 VCGYEYDPAKGDPDS 22 (52)
T ss_dssp TTCCEECTTTCBGGG
T ss_pred CCCeEECcccCCccc
Confidence 378888888777654
No 8
>d1brfa_ g.41.5.1 (A:) Rubredoxin {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=4.46 E-value=1.2e+02 Score=16.96 Aligned_cols=15 Identities=13% Similarity=0.153 Sum_probs=10.9
Q ss_pred cccccccCCCccccc
Q 026491 3 YCCYVSSSYFFHLEM 17 (238)
Q Consensus 3 ~~~~~~~~~~~~~~~ 17 (238)
-|.|+..+..|+++.
T Consensus 7 ~CgyiYd~~~Gd~~~ 21 (53)
T d1brfa_ 7 ICGYIYDEDAGDPDN 21 (53)
T ss_dssp TTCCEEETTTCBGGG
T ss_pred CCCcEECcccCCccc
Confidence 378888888777654
No 9
>d2r6gf1 e.70.1.1 (F:13-260) Maltose transport system permease protein MalF {Escherichia coli [TaxId: 562]}
Probab=4.39 E-value=5.4e+02 Score=18.64 Aligned_cols=28 Identities=7% Similarity=-0.091 Sum_probs=20.0
Q ss_pred hhhhhhHHhhhhhhhHHHHHHHHHHHHHH
Q 026491 36 YVLGYPGTVMVPLGWIAGVVGLIIATIVS 64 (238)
Q Consensus 36 GiLalP~a~~~~~G~~~G~i~l~~~~~~~ 64 (238)
.+.+.|.+ +++.-|..+.+++++..++.
T Consensus 15 ~~~~~~~~-~~~~~~~~a~~~~~~~~~~~ 42 (248)
T d2r6gf1 15 VGYLVVLM-YAQGEYLFAITTLILSSAGL 42 (248)
T ss_dssp HHHTHHHH-HGGGCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHH-HHcchHHHHHHHHHHHHheE
Confidence 45667778 88988888777766665544
No 10
>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}
Probab=4.38 E-value=81 Score=22.25 Aligned_cols=13 Identities=15% Similarity=-0.038 Sum_probs=11.0
Q ss_pred hhhhhhhhhhhHH
Q 026491 31 GINSAYVLGYPGT 43 (238)
Q Consensus 31 ~~iG~GiLalP~a 43 (238)
+++|+|-+++|.|
T Consensus 4 ~ViGlG~vGl~~a 16 (202)
T d1mv8a2 4 SIFGLGYVGAVCA 16 (202)
T ss_dssp EEECCSTTHHHHH
T ss_pred EEECCCHhHHHHH
Confidence 4689999999987
Done!