BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>026494
MASPSFNGDKYRSYLHGEEEKNTKWRFGSAPNYDVVDKLFEEGRTKVWPPGSLEEKVQNL
VKTWEMEMFHKTCFEDYKSVDPNNYTFSLNGRKPITLEEKRKLGGGYNSFMQTSLPEKYR
GYNPAEETVESSHIAFTKAFPRGFALEVVHVYSGPPVIVYKFRHWGYMEGPFKSHAPTGD
LVELYGIAIFEVDEQMKIVKVEFFLDRGELLGGLMKLKGDNSCGEEEALSCPFLRSTG

High Scoring Gene Products

Symbol, full name Information P value
AT1G78780 protein from Arabidopsis thaliana 4.2e-56

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  026494
        (238 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2037503 - symbol:AT1G78780 "AT1G78780" species...   578  4.2e-56   1
ASPGD|ASPL0000016045 - symbol:AN3877 species:162425 "Emer...   314  3.9e-28   1


>TAIR|locus:2037503 [details] [associations]
            symbol:AT1G78780 "AT1G78780" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
            "cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002684 GenomeReviews:CT485782_GR
            UniGene:At.34243 UniGene:At.48392 EMBL:AY088545 IPI:IPI00530867
            RefSeq:NP_565189.1 ProteinModelPortal:Q8L9B0 STRING:Q8L9B0
            PRIDE:Q8L9B0 ProMEX:Q8L9B0 DNASU:844214 EnsemblPlants:AT1G78780.2
            GeneID:844214 KEGG:ath:AT1G78780 TAIR:At1g78780 InParanoid:Q8L9B0
            OMA:GTYNLFM PhylomeDB:Q8L9B0 ProtClustDB:CLSN2689307
            Genevestigator:Q8L9B0 Uniprot:Q8L9B0
        Length = 238

 Score = 578 (208.5 bits), Expect = 4.2e-56, P = 4.2e-56
 Identities = 100/198 (50%), Positives = 144/198 (72%)

Query:     9 DKYRSYLHGEEEKNTKWRFGSAPNYDVVDKLFEEGRTKVWPPGSLEEKVQNLVKTWEMEM 68
             DKYRS L  E+    +WR+ + P+++ V++LFEEG+TKVWP GSLEE VQN +K+WEME 
Sbjct:     8 DKYRSVL--EDAGQVQWRYDNPPDFNSVNQLFEEGQTKVWPEGSLEETVQNAIKSWEMEF 65

Query:    69 FHKTCFEDYKSVDPNNYTFSLNGRKPITLEEKRKLGGGYNSFMQTSLPEKYRGYNPAEET 128
              HK   +D+K+++P  +   +NGR+ ++ EE  +LG  YN+ ++ SLPE+++ Y P EE+
Sbjct:    66 SHKIRLQDFKTINPEKFKLFVNGREGLSAEETLRLGS-YNALLKNSLPEEFQYYKPEEES 124

Query:   129 VESSHIAFTKAFPRGFALEVVHVYSGPPVIVYKFRHWGYMEGPFKSHAPTGDLVELYGIA 188
              ESSH AF  A PRGFA E++ VYSGPPVI +KFRHWGY EG FK HAPTG++V+  G+ 
Sbjct:   125 FESSHDAFRSALPRGFAWEILSVYSGPPVIAFKFRHWGYFEGTFKGHAPTGEMVQFLGLG 184

Query:   189 IFEVDEQMKIVKVEFFLD 206
             + +VDE ++  ++E + D
Sbjct:   185 VLKVDESLRAEEIEIYYD 202


>ASPGD|ASPL0000016045 [details] [associations]
            symbol:AN3877 species:162425 "Emericella nidulans"
            [GO:0008150 "biological_process" evidence=ND] [GO:0003674
            "molecular_function" evidence=ND] [GO:0005575 "cellular_component"
            evidence=ND] EMBL:BN001302 EMBL:AACD01000062 RefSeq:XP_661481.1
            EnsemblFungi:CADANIAT00004826 GeneID:2873296 KEGG:ani:AN3877.2
            eggNOG:NOG86993 HOGENOM:HOG000169851 OMA:FDIEANF OrthoDB:EOG4NZZ38
            Uniprot:Q5B6F3
        Length = 249

 Score = 314 (115.6 bits), Expect = 3.9e-28, P = 3.9e-28
 Identities = 68/191 (35%), Positives = 108/191 (56%)

Query:    25 WRFGSAPNYDVVDKLFEEGRTKVWPPGSLEEKVQNLVKTWEMEMFHKTCFEDYKSVDPNN 84
             WR+G  P+Y    + +E+ +T   P  SL   VQNLVK WE+E   KT  +D+++++P  
Sbjct:    24 WRYGRIPDYTKTREFYEKTKTTSHPATSLASLVQNLVKNWEIEASFKTSLDDWRTINPET 83

Query:    85 YTFSLNGRKPITLEEKRKLGGGYNSFMQTSLPEKYRGYNPAEETVESSHIAFTKAFPRGF 144
             YTFSLNG  P    E     G YN+ +  +   +Y  Y+P +   E SH +F +  P  F
Sbjct:    84 YTFSLNGG-PAQPGEHMLRVGTYNALINAN---EY--YDPEQNDFEGSHKSFKRMMPT-F 136

Query:   145 ALEVVHVYSGPPVIVYKFRHWGYMEGPFKSHAPTGDLV---------ELYGIAIFEVDEQ 195
             A EV  VY GPPV+V ++RHWG M+G +      G++V         ++ GI + +V+E+
Sbjct:   137 AWEVKEVYCGPPVVVARWRHWGLMKGDYVGKNGRGEVVRVKAHGGPIDIEGIVVAKVNEK 196

Query:   196 MKIVKVEFFLD 206
             +++ K++ + D
Sbjct:   197 LQLEKIDVWFD 207


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.317   0.136   0.421    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      238       226   0.00078  113 3  11 22  0.43    33
                                                     32  0.41    36


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  613 (65 KB)
  Total size of DFA:  202 KB (2113 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  20.33u 0.13s 20.46t   Elapsed:  00:00:00
  Total cpu time:  20.33u 0.13s 20.46t   Elapsed:  00:00:00
  Start:  Fri May 10 16:26:04 2013   End:  Fri May 10 16:26:04 2013

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