BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026495
(237 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225438783|ref|XP_002283079.1| PREDICTED: CBS domain-containing protein CBSX1, chloroplastic-like
[Vitis vinifera]
Length = 246
Score = 313 bits (801), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 160/221 (72%), Positives = 183/221 (82%), Gaps = 3/221 (1%)
Query: 1 MDSIVLPHSISVARLR-APPAGRTSGRTSFALQLPCLLLSRPGCR--VFSVLATSSDRVS 57
MD+I+LP +++V +R A + SG SF Q+PC LL +PG + V S + + S+R+S
Sbjct: 1 MDAILLPETLAVVGIRPAFASAFGSGSASFPHQMPCTLLFQPGRKPPVGSTVGSRSERIS 60
Query: 58 ALRRSSAVFASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRIT 117
+RRS A+ A+GTL ANS +GVYTVGDFMT KE+LHVVK TTTV+EALEILVE RIT
Sbjct: 61 GIRRSPALAAAGTLMANSVPSKNGVYTVGDFMTRKEDLHVVKATTTVEEALEILVENRIT 120
Query: 118 GFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGK 177
GFPVIDDDWKLVGLVSDYDLLALDSISG G D MFPEVDSTWKTFNE+QKLLSKTNGK
Sbjct: 121 GFPVIDDDWKLVGLVSDYDLLALDSISGGGLTDTIMFPEVDSTWKTFNELQKLLSKTNGK 180
Query: 178 MVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADG 218
+VGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVD+DG
Sbjct: 181 VVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDSDG 221
Score = 38.1 bits (87), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 31/49 (63%), Gaps = 2/49 (4%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVS 133
VGD MT VV+ TT +++A +L+E + PV+D D KLVG+++
Sbjct: 182 VGDLMTPAP--VVVRETTNLEDAARLLLETKYRRLPVVDSDGKLVGIIT 228
>gi|317106695|dbj|BAJ53196.1| JHL03K20.5 [Jatropha curcas]
Length = 236
Score = 308 bits (790), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 167/221 (75%), Positives = 180/221 (81%), Gaps = 14/221 (6%)
Query: 1 MDSIV---LPHSISVARLRAPPAGRTSGRTSFALQLPCLLLSRPGCRVFSVLATSSDRVS 57
MDSI+ L H + + RLRA TS SFA QLPCLL SRPG R+ + A +S
Sbjct: 1 MDSILHQELLH-LPITRLRATA---TSPIVSFAQQLPCLLSSRPGRRLLPLSA-----IS 51
Query: 58 ALRRSSAVFASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRIT 117
RRSSA+ ASG A+S P SGVYTVGDFMT KE+L VVKPTTTVDEAL+ LVE RIT
Sbjct: 52 HPRRSSAIAASGAFVASS--PKSGVYTVGDFMTRKEDLQVVKPTTTVDEALQTLVEHRIT 109
Query: 118 GFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGK 177
GFPVIDDDWKLVGLVSDYDLLALDSISG GR DNSMFPEVDSTWKTFNEVQKLLSKTNGK
Sbjct: 110 GFPVIDDDWKLVGLVSDYDLLALDSISGGGRTDNSMFPEVDSTWKTFNEVQKLLSKTNGK 169
Query: 178 MVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADG 218
+VGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVD++G
Sbjct: 170 LVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDSEG 210
Score = 37.0 bits (84), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%), Gaps = 2/49 (4%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVS 133
VGD MT VV+ TT +++A +L+E + PV+D + KLVG+++
Sbjct: 171 VGDLMTPAPV--VVRETTNLEDAARLLLETKYRRLPVVDSEGKLVGIIT 217
>gi|255587643|ref|XP_002534340.1| conserved hypothetical protein [Ricinus communis]
gi|223525462|gb|EEF28042.1| conserved hypothetical protein [Ricinus communis]
Length = 239
Score = 293 bits (751), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 159/214 (74%), Positives = 170/214 (79%), Gaps = 11/214 (5%)
Query: 5 VLPHSISVARLRAPPAGRTSGRTSFALQLPCLLLSRPGCRVFSVLATSSDRVSALRRSSA 64
+L H ++ R A P SFA QLPCLL S R L+ +S RRSS
Sbjct: 11 LLNHPLTRLRSTASPT-----VVSFAHQLPCLLSSATVSRRLFHLSV----ISWPRRSST 61
Query: 65 VFASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDD 124
+ A+GTL ANS P SGVYTVGDFMT KE+L VVKPTTTVDEAL+ LVE RITGFPVIDD
Sbjct: 62 ISATGTLMANS--PKSGVYTVGDFMTRKEDLCVVKPTTTVDEALQTLVEHRITGFPVIDD 119
Query: 125 DWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMT 184
DWKLVGLVSDYDLLALDSISG GR DNSMFPEVDSTWKTFNEVQKLLSKTNGK+VGDLMT
Sbjct: 120 DWKLVGLVSDYDLLALDSISGGGRTDNSMFPEVDSTWKTFNEVQKLLSKTNGKLVGDLMT 179
Query: 185 PAPVVVRETTNLEDAARLLLETKYRRLPVVDADG 218
PAPVVVRETTNLEDAARLLLETKYRRLPVVDA+G
Sbjct: 180 PAPVVVRETTNLEDAARLLLETKYRRLPVVDAEG 213
>gi|147802944|emb|CAN64036.1| hypothetical protein VITISV_021555 [Vitis vinifera]
Length = 288
Score = 290 bits (743), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 160/263 (60%), Positives = 182/263 (69%), Gaps = 45/263 (17%)
Query: 1 MDSIVLPHSISVARLR-APPAGRTSGRTSFALQLPCLLLSRPGCR--VFSVLATSSDRVS 57
MD+I+ P +++V +R A + SG SF Q+PC LL +PG + V S + + S+R+S
Sbjct: 1 MDAILPPETLAVVGIRPAFASAFGSGSASFPHQMPCTLLFQPGRKPPVGSTVGSRSERIS 60
Query: 58 ALRRSSAVFASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRIT 117
LRRS A+ A+GTL ANS +GVYTVGDFMT KE+LHVVK TTTV+EALEILVE RIT
Sbjct: 61 GLRRSPALAAAGTLMANSVPSKNGVYTVGDFMTRKEDLHVVKATTTVEEALEILVENRIT 120
Query: 118 GFPVIDDDWKLVGLVSDYDLLALDSI---------------------------------- 143
GFPVIDDDWKLVGLVSDYDLLALDSI
Sbjct: 121 GFPVIDDDWKLVGLVSDYDLLALDSISELPQLKHVPEDISGKSLVLHGSLERQMKSLFLT 180
Query: 144 --------SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTN 195
SG G D MFPEVDSTWKTFNE+QKLLSKTNGK+VGDLMTPAPVVVRETTN
Sbjct: 181 AVDVLIFGSGGGLTDTIMFPEVDSTWKTFNELQKLLSKTNGKVVGDLMTPAPVVVRETTN 240
Query: 196 LEDAARLLLETKYRRLPVVDADG 218
LEDAARLLLETKYRRLPVVD+DG
Sbjct: 241 LEDAARLLLETKYRRLPVVDSDG 263
Score = 38.1 bits (87), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 31/49 (63%), Gaps = 2/49 (4%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVS 133
VGD MT VV+ TT +++A +L+E + PV+D D KLVG+++
Sbjct: 224 VGDLMTPAPV--VVRETTNLEDAARLLLETKYRRLPVVDSDGKLVGIIT 270
>gi|224081731|ref|XP_002306482.1| predicted protein [Populus trichocarpa]
gi|222855931|gb|EEE93478.1| predicted protein [Populus trichocarpa]
Length = 208
Score = 282 bits (721), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 145/189 (76%), Positives = 160/189 (84%), Gaps = 10/189 (5%)
Query: 33 LPCLLLSRPGCRVFSVLATSSDRVSALRRSSAVFA---SGTLTANSAAPSSGVYTVGDFM 89
+PCLL S PG ++ S+ +S RRS ++ A SGTL ANS P SGVYTVGDFM
Sbjct: 1 MPCLLFSTPGRKLVSL-----SSISWPRRSPSLIAAASSGTLMANS--PKSGVYTVGDFM 53
Query: 90 TTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRA 149
T KE+LHVVKPTTTV+EALE LVE+RITGFPVIDDDWKLVGLVSDYDLLALDSISG GR
Sbjct: 54 TRKEDLHVVKPTTTVNEALETLVERRITGFPVIDDDWKLVGLVSDYDLLALDSISGGGRT 113
Query: 150 DNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYR 209
+ +MFPEVDSTWKTFNEVQ LL+KTNGK+VGDLMTPAPVVVRETTNLED+ RLLLETKYR
Sbjct: 114 ETNMFPEVDSTWKTFNEVQMLLNKTNGKVVGDLMTPAPVVVRETTNLEDSVRLLLETKYR 173
Query: 210 RLPVVDADG 218
RLPVVDADG
Sbjct: 174 RLPVVDADG 182
Score = 37.0 bits (84), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 32/49 (65%), Gaps = 2/49 (4%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVS 133
VGD MT VV+ TT +++++ +L+E + PV+D D KLVG+++
Sbjct: 143 VGDLMTPAPV--VVRETTNLEDSVRLLLETKYRRLPVVDADGKLVGIIT 189
>gi|449443418|ref|XP_004139474.1| PREDICTED: CBS domain-containing protein CBSX1, chloroplastic-like
[Cucumis sativus]
Length = 235
Score = 275 bits (703), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 145/214 (67%), Positives = 166/214 (77%), Gaps = 18/214 (8%)
Query: 9 SISVARLRAPPAGRTSGRTSFALQL----PCLLLSRPGCRVFSVLATSSDRVSALRRSSA 64
S+S+A RA SF++Q PC RP + A+ + LR+S++
Sbjct: 10 SLSLAPFRA---------KSFSVQEMLFGPC---RRPSLPILH--ASVAQSFPELRKSTS 55
Query: 65 VFASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDD 124
+ ASGTL ANS +GVY VGDFMT KEELHVVKPTT+VDEALEILVEKRITGFPVIDD
Sbjct: 56 IAASGTLMANSVPSGTGVYIVGDFMTRKEELHVVKPTTSVDEALEILVEKRITGFPVIDD 115
Query: 125 DWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMT 184
+WKLVG+VSDYDLLALDSISG GR D SMFPEVDS+WKTFNEVQ+LLSKTNGK+VGDLMT
Sbjct: 116 NWKLVGVVSDYDLLALDSISGGGRTDTSMFPEVDSSWKTFNEVQRLLSKTNGKVVGDLMT 175
Query: 185 PAPVVVRETTNLEDAARLLLETKYRRLPVVDADG 218
AP+VVRE T+LED ARLLL+TKYRRLPVVDADG
Sbjct: 176 TAPLVVREITDLEDVARLLLQTKYRRLPVVDADG 209
>gi|449525190|ref|XP_004169601.1| PREDICTED: CBS domain-containing protein CBSX1, chloroplastic-like
[Cucumis sativus]
Length = 235
Score = 275 bits (702), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 145/214 (67%), Positives = 166/214 (77%), Gaps = 18/214 (8%)
Query: 9 SISVARLRAPPAGRTSGRTSFALQL----PCLLLSRPGCRVFSVLATSSDRVSALRRSSA 64
S+S+A RA SF++Q PC RP + A+ + LR+S++
Sbjct: 10 SLSLAPFRA---------KSFSVQEMLFGPC---RRPSLPILH--ASVAQSFPELRKSTS 55
Query: 65 VFASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDD 124
+ ASGTL ANS +GVY VGDFMT KEELHVVKPTT+VDEALEILVEKRITGFPVIDD
Sbjct: 56 IAASGTLMANSLPSGTGVYIVGDFMTRKEELHVVKPTTSVDEALEILVEKRITGFPVIDD 115
Query: 125 DWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMT 184
+WKLVG+VSDYDLLALDSISG GR D SMFPEVDS+WKTFNEVQ+LLSKTNGK+VGDLMT
Sbjct: 116 NWKLVGVVSDYDLLALDSISGGGRTDTSMFPEVDSSWKTFNEVQRLLSKTNGKVVGDLMT 175
Query: 185 PAPVVVRETTNLEDAARLLLETKYRRLPVVDADG 218
AP+VVRE T+LED ARLLL+TKYRRLPVVDADG
Sbjct: 176 TAPLVVREITDLEDVARLLLQTKYRRLPVVDADG 209
>gi|15234564|ref|NP_195409.1| cystathionine beta-synthase domain-containing protein [Arabidopsis
thaliana]
gi|75219197|sp|O23193.2|CBSX1_ARATH RecName: Full=CBS domain-containing protein CBSX1, chloroplastic;
AltName: Full=CBS domain-containing protein 2;
Short=AtCDCP2; AltName: Full=Protein LOSS OF THE TIMING
OF ET AND JA BIOSYNTHESIS 2; Short=AtLEJ2; Flags:
Precursor
gi|4006881|emb|CAB16799.1| putative protein [Arabidopsis thaliana]
gi|7270640|emb|CAB80357.1| putative protein [Arabidopsis thaliana]
gi|21537376|gb|AAM61717.1| unknown [Arabidopsis thaliana]
gi|28392900|gb|AAO41886.1| unknown protein [Arabidopsis thaliana]
gi|28827758|gb|AAO50723.1| unknown protein [Arabidopsis thaliana]
gi|332661316|gb|AEE86716.1| cystathionine beta-synthase domain-containing protein [Arabidopsis
thaliana]
Length = 236
Score = 271 bits (692), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 130/157 (82%), Positives = 144/157 (91%)
Query: 62 SSAVFASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPV 121
S++ A TL NS++P SGVYTVG+FMT KE+LHVVKPTTTVDEALE+LVE RITGFPV
Sbjct: 54 SASSAAGSTLMTNSSSPRSGVYTVGEFMTKKEDLHVVKPTTTVDEALELLVENRITGFPV 113
Query: 122 IDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGD 181
ID+DWKLVGLVSDYDLLALDSISGSGR +NSMFPEVDSTWKTFN VQKLLSKTNGK+VGD
Sbjct: 114 IDEDWKLVGLVSDYDLLALDSISGSGRTENSMFPEVDSTWKTFNAVQKLLSKTNGKLVGD 173
Query: 182 LMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADG 218
LMTPAP+VV E TNLEDAA++LLETKYRRLPVVD+DG
Sbjct: 174 LMTPAPLVVEEKTNLEDAAKILLETKYRRLPVVDSDG 210
Score = 37.4 bits (85), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 31/49 (63%), Gaps = 2/49 (4%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVS 133
VGD MT VV+ T +++A +IL+E + PV+D D KLVG+++
Sbjct: 171 VGDLMTPAP--LVVEEKTNLEDAAKILLETKYRRLPVVDSDGKLVGIIT 217
>gi|356541776|ref|XP_003539349.1| PREDICTED: CBS domain-containing protein CBSX1, chloroplastic
[Glycine max]
gi|255632210|gb|ACU16463.1| unknown [Glycine max]
Length = 228
Score = 270 bits (690), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 128/152 (84%), Positives = 142/152 (93%)
Query: 67 ASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDW 126
A+ TLTAN +P SG+YTVGDFMT KE+LHVVKPTT+VDEALEILVE RITGFPVIDD+W
Sbjct: 51 AANTLTANDVSPRSGLYTVGDFMTKKEDLHVVKPTTSVDEALEILVENRITGFPVIDDNW 110
Query: 127 KLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPA 186
KLVG+VSDYDLLALDSISG G DN+MFPEVDSTWKTFNEVQKLLSKTNGK++G+LMT A
Sbjct: 111 KLVGVVSDYDLLALDSISGHGLKDNNMFPEVDSTWKTFNEVQKLLSKTNGKLIGELMTTA 170
Query: 187 PVVVRETTNLEDAARLLLETKYRRLPVVDADG 218
P+VVRETTNLEDAARLLLETK+RRLPVVDA+G
Sbjct: 171 PMVVRETTNLEDAARLLLETKFRRLPVVDAEG 202
Score = 36.6 bits (83), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 32/49 (65%), Gaps = 2/49 (4%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVS 133
+G+ MTT VV+ TT +++A +L+E + PV+D + +LVG+++
Sbjct: 163 IGELMTTAP--MVVRETTNLEDAARLLLETKFRRLPVVDAEGRLVGIIT 209
>gi|297802232|ref|XP_002869000.1| hypothetical protein ARALYDRAFT_490898 [Arabidopsis lyrata subsp.
lyrata]
gi|297314836|gb|EFH45259.1| hypothetical protein ARALYDRAFT_490898 [Arabidopsis lyrata subsp.
lyrata]
Length = 236
Score = 269 bits (687), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 129/157 (82%), Positives = 144/157 (91%)
Query: 62 SSAVFASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPV 121
S++ A TL NS++P SGVYTVG+FMT K++LHVVKPTTTVDEALE+LVE RITGFPV
Sbjct: 54 SASSAAGSTLMKNSSSPRSGVYTVGEFMTKKDDLHVVKPTTTVDEALELLVENRITGFPV 113
Query: 122 IDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGD 181
ID+DWKLVGLVSDYDLLALDSISGSGR +NSMFPEVDSTWKTFN VQKLLSKTNGK+VGD
Sbjct: 114 IDEDWKLVGLVSDYDLLALDSISGSGRTENSMFPEVDSTWKTFNAVQKLLSKTNGKLVGD 173
Query: 182 LMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADG 218
LMTPAP+VV E TNLEDAA++LLETKYRRLPVVD+DG
Sbjct: 174 LMTPAPLVVEEKTNLEDAAKILLETKYRRLPVVDSDG 210
Score = 37.7 bits (86), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 31/49 (63%), Gaps = 2/49 (4%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVS 133
VGD MT VV+ T +++A +IL+E + PV+D D KLVG+++
Sbjct: 171 VGDLMTPAP--LVVEEKTNLEDAAKILLETKYRRLPVVDSDGKLVGIIT 217
>gi|357482805|ref|XP_003611689.1| Inosine-5'-monophosphate dehydrogenase [Medicago truncatula]
gi|355513024|gb|AES94647.1| Inosine-5'-monophosphate dehydrogenase [Medicago truncatula]
Length = 224
Score = 269 bits (687), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 128/158 (81%), Positives = 145/158 (91%)
Query: 61 RSSAVFASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFP 120
R S +FA+ TLTANS P +GVYTVGDFMT K+ELH VKPTTTVDEAL+ LVE RITGFP
Sbjct: 41 RGSPLFAANTLTANSVPPKNGVYTVGDFMTKKDELHTVKPTTTVDEALDSLVEHRITGFP 100
Query: 121 VIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVG 180
VIDD+WKLVG+VSDYDLLALDSISG G+ DNS+FP+VDSTWKTFNEVQ+LLSKTNGK++G
Sbjct: 101 VIDDNWKLVGVVSDYDLLALDSISGQGQTDNSLFPDVDSTWKTFNEVQRLLSKTNGKVIG 160
Query: 181 DLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADG 218
+LMT AP+VVRETTNLEDAARLLLETK+RRLPVVDA+G
Sbjct: 161 ELMTTAPMVVRETTNLEDAARLLLETKFRRLPVVDAEG 198
>gi|356496921|ref|XP_003517313.1| PREDICTED: CBS domain-containing protein CBSX1, chloroplastic-like
[Glycine max]
Length = 228
Score = 268 bits (686), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 136/182 (74%), Positives = 153/182 (84%), Gaps = 4/182 (2%)
Query: 40 RPGCRVFSVLATSSDRVSA---LRRSSAVFASGTLTANSAAPSSGVYTVGDFMTTKEELH 96
RP C + + S R S R S + A+ TLTAN+ +P SG+YTVGDFMT KE+LH
Sbjct: 22 RPLCHPLAASSASFHRSSPPLPRFRFSPLLAANTLTANNISPRSGLYTVGDFMTKKEDLH 81
Query: 97 VVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPE 156
VVKPTT+VDEALEILVE RITGFPVIDD+WKLVG+VSDYDLLALDSISG G DN MFPE
Sbjct: 82 VVKPTTSVDEALEILVENRITGFPVIDDNWKLVGVVSDYDLLALDSISGHGLKDN-MFPE 140
Query: 157 VDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDA 216
VDSTWKTFNEVQKLLSKTNGK++G+LMT AP+VVRETTNLEDAARLLLETK+RRLPVVDA
Sbjct: 141 VDSTWKTFNEVQKLLSKTNGKLIGELMTTAPMVVRETTNLEDAARLLLETKFRRLPVVDA 200
Query: 217 DG 218
+G
Sbjct: 201 EG 202
Score = 36.6 bits (83), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 32/49 (65%), Gaps = 2/49 (4%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVS 133
+G+ MTT VV+ TT +++A +L+E + PV+D + +LVG+++
Sbjct: 163 IGELMTTAP--MVVRETTNLEDAARLLLETKFRRLPVVDAEGRLVGIIT 209
>gi|217075546|gb|ACJ86133.1| unknown [Medicago truncatula]
gi|388495112|gb|AFK35622.1| unknown [Medicago truncatula]
Length = 224
Score = 266 bits (681), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 127/158 (80%), Positives = 144/158 (91%)
Query: 61 RSSAVFASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFP 120
R S +FA+ TLTANS P +GVYTVGDFMT K+ELH VKPTTTVDEAL+ LVE RITGFP
Sbjct: 41 RGSPLFAANTLTANSVPPKNGVYTVGDFMTKKDELHTVKPTTTVDEALDSLVEHRITGFP 100
Query: 121 VIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVG 180
VIDD+WKLVG+VSDYDLLALDSISG G+ DNS+FP+VDSTWKTFNEVQ+L SKTNGK++G
Sbjct: 101 VIDDNWKLVGVVSDYDLLALDSISGQGQTDNSLFPDVDSTWKTFNEVQRLQSKTNGKVIG 160
Query: 181 DLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADG 218
+LMT AP+VVRETTNLEDAARLLLETK+RRLPVVDA+G
Sbjct: 161 ELMTTAPMVVRETTNLEDAARLLLETKFRRLPVVDAEG 198
>gi|296082380|emb|CBI21385.3| unnamed protein product [Vitis vinifera]
Length = 172
Score = 261 bits (668), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 128/146 (87%), Positives = 134/146 (91%)
Query: 73 ANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLV 132
ANS +GVYTVGDFMT KE+LHVVK TTTV+EALEILVE RITGFPVIDDDWKLVGLV
Sbjct: 2 ANSVPSKNGVYTVGDFMTRKEDLHVVKATTTVEEALEILVENRITGFPVIDDDWKLVGLV 61
Query: 133 SDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRE 192
SDYDLLALDSISG G D MFPEVDSTWKTFNE+QKLLSKTNGK+VGDLMTPAPVVVRE
Sbjct: 62 SDYDLLALDSISGGGLTDTIMFPEVDSTWKTFNELQKLLSKTNGKVVGDLMTPAPVVVRE 121
Query: 193 TTNLEDAARLLLETKYRRLPVVDADG 218
TTNLEDAARLLLETKYRRLPVVD+DG
Sbjct: 122 TTNLEDAARLLLETKYRRLPVVDSDG 147
Score = 36.6 bits (83), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 31/49 (63%), Gaps = 2/49 (4%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVS 133
VGD MT VV+ TT +++A +L+E + PV+D D KLVG+++
Sbjct: 108 VGDLMTPAP--VVVRETTNLEDAARLLLETKYRRLPVVDSDGKLVGIIT 154
>gi|442570759|pdb|4GQV|A Chain A, Crystal Structure Of Cbs-pair Protein, Cbsx1 From
Arabidopsis Thaliana
Length = 166
Score = 258 bits (659), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 123/139 (88%), Positives = 133/139 (95%)
Query: 80 SGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 139
SGVYTVG+FMT KE+LHVVKPTTTVDEALE+LVE RITGFPVID+DWKLVGLVSDYDLLA
Sbjct: 2 SGVYTVGEFMTKKEDLHVVKPTTTVDEALELLVENRITGFPVIDEDWKLVGLVSDYDLLA 61
Query: 140 LDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDA 199
LDSISGSGR +NSMFPEVDSTWKTFN VQKLLSKTNGK+VGDLMTPAP+VV E TNLEDA
Sbjct: 62 LDSISGSGRTENSMFPEVDSTWKTFNAVQKLLSKTNGKLVGDLMTPAPLVVEEKTNLEDA 121
Query: 200 ARLLLETKYRRLPVVDADG 218
A++LLETKYRRLPVVD+DG
Sbjct: 122 AKILLETKYRRLPVVDSDG 140
>gi|343172406|gb|AEL98907.1| cystathionine beta-synthase domain-containing protein, partial
[Silene latifolia]
gi|343172408|gb|AEL98908.1| cystathionine beta-synthase domain-containing protein, partial
[Silene latifolia]
Length = 227
Score = 256 bits (654), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 138/210 (65%), Positives = 160/210 (76%), Gaps = 10/210 (4%)
Query: 9 SISVARLRAPPAGRTSGRTSFALQLPCLLLSRPGCRVFSVLATSSDRVSALRRSSAVFAS 68
S+S R R P+ TS +LP + R F + +SS ++ +SA S
Sbjct: 2 SLSSTRRRFTPSASLLS-TSIIPKLPSV------SRTFRL--SSSSKLRCFSAASAAVNS 52
Query: 69 GTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKL 128
T +S+ +GVYTVGDFMTT+E L VVKPTTTVDEALEILVEKRITGFPVIDDDWKL
Sbjct: 53 -TFNGHSSPSKNGVYTVGDFMTTRENLAVVKPTTTVDEALEILVEKRITGFPVIDDDWKL 111
Query: 129 VGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPV 188
VGLVSDYDLLALD+ISG+G + SMFPEVDS+WK FNE+QKLLSKTNGK+V D+MT AP+
Sbjct: 112 VGLVSDYDLLALDTISGTGLGEASMFPEVDSSWKVFNELQKLLSKTNGKLVADVMTQAPL 171
Query: 189 VVRETTNLEDAARLLLETKYRRLPVVDADG 218
VVRETTNL+DAARLLLETKYRRLPVVDADG
Sbjct: 172 VVRETTNLDDAARLLLETKYRRLPVVDADG 201
Score = 38.1 bits (87), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 31/49 (63%), Gaps = 2/49 (4%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVS 133
V D MT + VV+ TT +D+A +L+E + PV+D D KLVG+++
Sbjct: 162 VADVMT--QAPLVVRETTNLDDAARLLLETKYRRLPVVDADGKLVGIIT 208
>gi|34015153|gb|AAQ56349.1| putative CBS domain containing protein [Oryza sativa Japonica
Group]
Length = 190
Score = 249 bits (636), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 120/158 (75%), Positives = 138/158 (87%), Gaps = 1/158 (0%)
Query: 62 SSAVFASGTLTANSAAP-SSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFP 120
SS SG + + P +SG+YTVGDFMT +EELHVVK TT+VDEALE+LVE RITGFP
Sbjct: 7 SSPALVSGLMVVRAKNPQNSGIYTVGDFMTKREELHVVKSTTSVDEALEMLVEHRITGFP 66
Query: 121 VIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVG 180
VIDD+W LVG+VSDYDLLALDSISG+G A+ +FPEVDSTWKTFNE+QKLLSKTNGK++G
Sbjct: 67 VIDDEWNLVGVVSDYDLLALDSISGNGLAEVDIFPEVDSTWKTFNEIQKLLSKTNGKVIG 126
Query: 181 DLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADG 218
D+MT AP+VVRETTNLEDAARLLLETKYRRLPVVD+ G
Sbjct: 127 DVMTSAPLVVRETTNLEDAARLLLETKYRRLPVVDSSG 164
>gi|388522595|gb|AFK49359.1| unknown [Lotus japonicus]
Length = 222
Score = 246 bits (628), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 116/145 (80%), Positives = 133/145 (91%)
Query: 74 NSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVS 133
NS P +GVYTVGDFMT +E+LHVVKPTTTVDEALE+LVE R+TGFPVIDD W LV +VS
Sbjct: 52 NSVPPKNGVYTVGDFMTKREDLHVVKPTTTVDEALEMLVEHRVTGFPVIDDKWNLVCVVS 111
Query: 134 DYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRET 193
DYDLLALDSISG+GR ++SMFPEVDS+WKTFNEVQ LLSKTNGK++G+LMT AP+VVRE
Sbjct: 112 DYDLLALDSISGNGRKESSMFPEVDSSWKTFNEVQNLLSKTNGKVIGELMTTAPMVVREN 171
Query: 194 TNLEDAARLLLETKYRRLPVVDADG 218
TNLEDAARLLLETK+RRLPVVD++G
Sbjct: 172 TNLEDAARLLLETKFRRLPVVDSEG 196
>gi|225428867|ref|XP_002285148.1| PREDICTED: CBS domain-containing protein CBSX1, chloroplastic
[Vitis vinifera]
gi|297741249|emb|CBI32380.3| unnamed protein product [Vitis vinifera]
Length = 230
Score = 246 bits (628), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 120/161 (74%), Positives = 134/161 (83%), Gaps = 3/161 (1%)
Query: 58 ALRRSSAVFASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRIT 117
ALRR A +T NS +G Y VGDFMT KE LHVVKPTT VDEALE LVEK+IT
Sbjct: 47 ALRRRPA---HAAITTNSVPHRNGTYRVGDFMTKKEHLHVVKPTTPVDEALEALVEKKIT 103
Query: 118 GFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGK 177
GFPVID+DWKLVGLVSDYDLLALDSISG + D ++FP+VDS+WK FN++QKLL+KT GK
Sbjct: 104 GFPVIDEDWKLVGLVSDYDLLALDSISGGAQIDTTLFPDVDSSWKAFNQIQKLLAKTKGK 163
Query: 178 MVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADG 218
+VGD+MTPAPVVV ETTNLEDAARLLLETKYRRLPVVD DG
Sbjct: 164 VVGDVMTPAPVVVHETTNLEDAARLLLETKYRRLPVVDGDG 204
Score = 37.0 bits (84), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVS 133
VGD MT VV TT +++A +L+E + PV+D D KLVG+V+
Sbjct: 165 VGDVMTPAPV--VVHETTNLEDAARLLLETKYRRLPVVDGDGKLVGIVT 211
>gi|115475836|ref|NP_001061514.1| Os08g0313200 [Oryza sativa Japonica Group]
gi|50508236|dbj|BAD31758.1| putative CBS domain containing protein [Oryza sativa Japonica
Group]
gi|113623483|dbj|BAF23428.1| Os08g0313200 [Oryza sativa Japonica Group]
gi|215768507|dbj|BAH00736.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218194170|gb|EEC76597.1| hypothetical protein OsI_14449 [Oryza sativa Indica Group]
gi|222640324|gb|EEE68456.1| hypothetical protein OsJ_26849 [Oryza sativa Japonica Group]
gi|258644543|dbj|BAI39797.1| CBS domain-containing protein -like [Oryza sativa Indica Group]
gi|258644675|dbj|BAI39922.1| CBS domain-containing protein -like [Oryza sativa Indica Group]
Length = 235
Score = 246 bits (627), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 117/146 (80%), Positives = 134/146 (91%)
Query: 73 ANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLV 132
A+ A +SG+YTVGDFMT +EELHVVK TT+VDEALE+LVE RITGFPVIDD+W LVG+V
Sbjct: 64 ASVAGQNSGIYTVGDFMTKREELHVVKSTTSVDEALEMLVEHRITGFPVIDDEWNLVGVV 123
Query: 133 SDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRE 192
SDYDLLALDSISG+G A+ +FPEVDSTWKTFNE+QKLLSKTNGK++GD+MT AP+VVRE
Sbjct: 124 SDYDLLALDSISGNGLAEVDIFPEVDSTWKTFNEIQKLLSKTNGKVIGDVMTSAPLVVRE 183
Query: 193 TTNLEDAARLLLETKYRRLPVVDADG 218
TTNLEDAARLLLETKYRRLPVVD+ G
Sbjct: 184 TTNLEDAARLLLETKYRRLPVVDSSG 209
>gi|449445894|ref|XP_004140707.1| PREDICTED: CBS domain-containing protein CBSX1, chloroplastic-like
[Cucumis sativus]
gi|449486597|ref|XP_004157343.1| PREDICTED: CBS domain-containing protein CBSX1, chloroplastic-like
[Cucumis sativus]
Length = 239
Score = 244 bits (622), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 121/166 (72%), Positives = 137/166 (82%)
Query: 53 SDRVSALRRSSAVFASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILV 112
SDR A V AS + P G YTVGDFMT KE L+VVKPTTTVDEALE+LV
Sbjct: 48 SDRFPARPPLPLVLASSGAGVVDSFPLRGTYTVGDFMTRKENLYVVKPTTTVDEALEVLV 107
Query: 113 EKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLS 172
EKRITGFPV+DDDW LVG+VSDYDLLALDSISG ++D ++FP+VDS+WKTFNE+QKLL
Sbjct: 108 EKRITGFPVVDDDWNLVGVVSDYDLLALDSISGGTQSDTNLFPDVDSSWKTFNEIQKLLC 167
Query: 173 KTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADG 218
KTNGK+VGDLMT +P+ VRET+NLEDAARLLLETKYRRLPVVDADG
Sbjct: 168 KTNGKVVGDLMTSSPLAVRETSNLEDAARLLLETKYRRLPVVDADG 213
>gi|224096724|ref|XP_002310713.1| predicted protein [Populus trichocarpa]
gi|222853616|gb|EEE91163.1| predicted protein [Populus trichocarpa]
Length = 156
Score = 242 bits (618), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 118/130 (90%), Positives = 124/130 (95%)
Query: 89 MTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGR 148
MT KE+LHVVKPTTTVDEALE LVE RITGFPVIDDDWKLVGLVSDYDLLALDSISG GR
Sbjct: 1 MTRKEDLHVVKPTTTVDEALEALVEHRITGFPVIDDDWKLVGLVSDYDLLALDSISGGGR 60
Query: 149 ADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKY 208
+ +MFPEV+STWKTFNEVQ+LLSKTNGK+VGDLMTPAPVVVRETTNLEDAARLLLETKY
Sbjct: 61 TETNMFPEVESTWKTFNEVQRLLSKTNGKVVGDLMTPAPVVVRETTNLEDAARLLLETKY 120
Query: 209 RRLPVVDADG 218
RRLPVVDADG
Sbjct: 121 RRLPVVDADG 130
>gi|224056130|ref|XP_002298732.1| predicted protein [Populus trichocarpa]
gi|222845990|gb|EEE83537.1| predicted protein [Populus trichocarpa]
Length = 236
Score = 239 bits (611), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 120/158 (75%), Positives = 132/158 (83%), Gaps = 1/158 (0%)
Query: 61 RSSAVFASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFP 120
RSS A T+ ANS SG+YTVGDFMT KE L+VVK TTVDEALE LVEKRITGFP
Sbjct: 54 RSSVAVALSTV-ANSVPARSGIYTVGDFMTKKEGLYVVKANTTVDEALEALVEKRITGFP 112
Query: 121 VIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVG 180
VIDDDW+LVG+VSDYDLLALDSISG + D ++FP VDS+WKTFNE+QKLL K NGK+VG
Sbjct: 113 VIDDDWRLVGVVSDYDLLALDSISGGCQNDTNLFPNVDSSWKTFNELQKLLIKNNGKLVG 172
Query: 181 DLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADG 218
DLMTP P+VV ETTNLEDA RLLLETKYRRLPVVD DG
Sbjct: 173 DLMTPNPLVVYETTNLEDAVRLLLETKYRRLPVVDDDG 210
Score = 43.1 bits (100), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 35/54 (64%), Gaps = 2/54 (3%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 138
VGD MT VV TT +++A+ +L+E + PV+DDD KLVG+++ D++
Sbjct: 171 VGDLMTPNP--LVVYETTNLEDAVRLLLETKYRRLPVVDDDGKLVGIITRGDIV 222
>gi|18418376|ref|NP_567952.1| cystathionine beta-synthase domain-containing protein [Arabidopsis
thaliana]
gi|75268156|sp|Q9C5D0.1|CBSX2_ARATH RecName: Full=CBS domain-containing protein CBSX2, chloroplastic;
AltName: Full=CBS domain-containing protein 1;
Short=AtCDCP1; AltName: Full=Protein LOSS OF THE TIMING
OF ET AND JA BIOSYNTHESIS 1; Short=AtLEJ1; Flags:
Precursor
gi|13430838|gb|AAK26041.1|AF360331_1 unknown protein [Arabidopsis thaliana]
gi|15810601|gb|AAL07188.1| unknown protein [Arabidopsis thaliana]
gi|332660926|gb|AEE86326.1| cystathionine beta-synthase domain-containing protein [Arabidopsis
thaliana]
Length = 238
Score = 238 bits (606), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 117/170 (68%), Positives = 142/170 (83%), Gaps = 11/170 (6%)
Query: 60 RRSSAVFASGTLTANSAAPSS-----------GVYTVGDFMTTKEELHVVKPTTTVDEAL 108
RRSS S T++A AAP+S G YTVGDFMT ++ LHVVKP+T+VD+AL
Sbjct: 43 RRSSTFSPSITVSAFFAAPASVNNNNSVPAKNGGYTVGDFMTPRQNLHVVKPSTSVDDAL 102
Query: 109 EILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQ 168
E+LVEK++TG PVIDD+W LVG+VSDYDLLALDSISG + D ++FP+VDSTWKTFNE+Q
Sbjct: 103 ELLVEKKVTGLPVIDDNWTLVGVVSDYDLLALDSISGRSQNDTNLFPDVDSTWKTFNELQ 162
Query: 169 KLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADG 218
KL+SKT GK+VGDLMTP+P+VVR++TNLEDAARLLLETK+RRLPVVDADG
Sbjct: 163 KLISKTYGKVVGDLMTPSPLVVRDSTNLEDAARLLLETKFRRLPVVDADG 212
>gi|255555395|ref|XP_002518734.1| conserved hypothetical protein [Ricinus communis]
gi|223542115|gb|EEF43659.1| conserved hypothetical protein [Ricinus communis]
Length = 220
Score = 237 bits (605), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 114/164 (69%), Positives = 139/164 (84%), Gaps = 1/164 (0%)
Query: 55 RVSALRRSSAVFASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEK 114
R SALR ++ TLT N+ P +G+YTVGDFMT KE+L+VVK TTVDEALE +VEK
Sbjct: 34 RRSALRSRTSAINFSTLT-NNGLPRNGMYTVGDFMTRKEDLYVVKTMTTVDEALEAMVEK 92
Query: 115 RITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKT 174
+I+GFPV+DD+WKLVG+VSDYDLLAL+SISG ++ ++FP+ DS+WKTFNE+QKLL+K
Sbjct: 93 KISGFPVVDDNWKLVGVVSDYDLLALNSISGRNQSGTNLFPDTDSSWKTFNEMQKLLTKN 152
Query: 175 NGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADG 218
NGK+VGDLMTPAP+VV ETTNLEDAARLLL+TKY RLPVVD DG
Sbjct: 153 NGKVVGDLMTPAPLVVNETTNLEDAARLLLDTKYHRLPVVDGDG 196
>gi|147839911|emb|CAN65905.1| hypothetical protein VITISV_004872 [Vitis vinifera]
Length = 298
Score = 237 bits (605), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 113/145 (77%), Positives = 127/145 (87%)
Query: 74 NSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVS 133
N+ +G Y VGDFMT KE LHVVKPTT VDEALE LVEK+ITGFPVID+DWKLVGLVS
Sbjct: 128 NACHHRNGTYRVGDFMTKKEHLHVVKPTTPVDEALEALVEKKITGFPVIDEDWKLVGLVS 187
Query: 134 DYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRET 193
DYDLLALDSISG + D ++FP+VDS+WK FN++QKLL+KT GK+VGD+MTPAPVVV ET
Sbjct: 188 DYDLLALDSISGGAQIDTTLFPDVDSSWKAFNQIQKLLAKTKGKVVGDVMTPAPVVVHET 247
Query: 194 TNLEDAARLLLETKYRRLPVVDADG 218
TNLEDAARLLLETKYRRLPVVD DG
Sbjct: 248 TNLEDAARLLLETKYRRLPVVDGDG 272
Score = 37.0 bits (84), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVS 133
VGD MT VV TT +++A +L+E + PV+D D KLVG+V+
Sbjct: 233 VGDVMTPAPV--VVHETTNLEDAARLLLETKYRRLPVVDGDGKLVGIVT 279
>gi|297802578|ref|XP_002869173.1| hypothetical protein ARALYDRAFT_491262 [Arabidopsis lyrata subsp.
lyrata]
gi|297315009|gb|EFH45432.1| hypothetical protein ARALYDRAFT_491262 [Arabidopsis lyrata subsp.
lyrata]
Length = 237
Score = 237 bits (604), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 112/157 (71%), Positives = 139/157 (88%), Gaps = 1/157 (0%)
Query: 63 SAVFASGTLTANSAAPS-SGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPV 121
SA FA+ N++ P+ +G YTVGDFMT ++ LHVVKP+T+VD+ALE+LVEK++TG PV
Sbjct: 55 SAFFAAPASVNNNSVPAKNGGYTVGDFMTPRQNLHVVKPSTSVDDALELLVEKKVTGLPV 114
Query: 122 IDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGD 181
IDD+W LVG+VSDYDLLALDSISG + D ++FP+VDSTWKTFNE+QKL+SKT GK+VGD
Sbjct: 115 IDDNWTLVGVVSDYDLLALDSISGRSQNDTNLFPDVDSTWKTFNELQKLISKTYGKVVGD 174
Query: 182 LMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADG 218
LMTP+P+VVR++TNLEDAARLLLETK+RRLPVVDADG
Sbjct: 175 LMTPSPLVVRDSTNLEDAARLLLETKFRRLPVVDADG 211
>gi|326488002|dbj|BAJ89840.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326512290|dbj|BAJ96126.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 230
Score = 236 bits (602), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 117/164 (71%), Positives = 136/164 (82%), Gaps = 2/164 (1%)
Query: 57 SALRRSSAVFASGTLTANSAA--PSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEK 114
S++R S+A A G L +++ + G YTVGDFMT +E LHVVKP+T+VDEALE LVE
Sbjct: 41 SSIRASAATAARGNLPHHTSVVVEAGGAYTVGDFMTKREHLHVVKPSTSVDEALERLVEH 100
Query: 115 RITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKT 174
RITGFPV DD W LVG+VSDYDLLALDSISG+G+A+ +FPEVDSTWKTF E+QKLLSKT
Sbjct: 101 RITGFPVTDDHWNLVGVVSDYDLLALDSISGNGQAEPDIFPEVDSTWKTFREIQKLLSKT 160
Query: 175 NGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADG 218
NGK+V D+MT AP+VVRETTNLEDAARLLL TKYRRLPVVD G
Sbjct: 161 NGKVVSDVMTSAPLVVRETTNLEDAARLLLVTKYRRLPVVDGSG 204
>gi|195619856|gb|ACG31758.1| IMP dehydrogenase [Zea mays]
gi|195637366|gb|ACG38151.1| IMP dehydrogenase [Zea mays]
gi|413922004|gb|AFW61936.1| IMP dehydrogenase [Zea mays]
Length = 232
Score = 234 bits (598), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 111/146 (76%), Positives = 131/146 (89%)
Query: 73 ANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLV 132
A+ A S+G Y VGD MT +EELHVVKPTT+VD+ALE+LV+ RI+GFPVIDDDW LVG+V
Sbjct: 61 ASVAGQSTGSYRVGDVMTKREELHVVKPTTSVDDALEMLVKHRISGFPVIDDDWNLVGVV 120
Query: 133 SDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRE 192
SDYDLLALD+ISG+G A+ +FPEVDSTWKTF+E+QKLLSKTNGK++ D+MTPAP+VVRE
Sbjct: 121 SDYDLLALDTISGAGPAEADIFPEVDSTWKTFHEIQKLLSKTNGKVIADVMTPAPLVVRE 180
Query: 193 TTNLEDAARLLLETKYRRLPVVDADG 218
TTNLEDAARLLL TKYRRLPVVD+ G
Sbjct: 181 TTNLEDAARLLLVTKYRRLPVVDSSG 206
>gi|357145579|ref|XP_003573692.1| PREDICTED: CBS domain-containing protein CBSX1, chloroplastic-like
[Brachypodium distachyon]
Length = 233
Score = 233 bits (594), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 112/143 (78%), Positives = 127/143 (88%)
Query: 76 AAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDY 135
A +S YTVGDFMT +EELHVVKPTT+VDEALE LVE RITGFPVIDDDW LVG+VSDY
Sbjct: 65 AGETSRTYTVGDFMTKREELHVVKPTTSVDEALERLVEHRITGFPVIDDDWNLVGVVSDY 124
Query: 136 DLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTN 195
DLLALDSISG+G A+ +FPEVDSTWKTF E+QKLLSKTNG+++ D+MT +P+VVRETTN
Sbjct: 125 DLLALDSISGNGMAEGDIFPEVDSTWKTFREIQKLLSKTNGQVISDVMTSSPLVVRETTN 184
Query: 196 LEDAARLLLETKYRRLPVVDADG 218
LEDAARLLL TKYRRLPVVD+ G
Sbjct: 185 LEDAARLLLVTKYRRLPVVDSSG 207
>gi|226529195|ref|NP_001149160.1| LOC100282782 [Zea mays]
gi|195625176|gb|ACG34418.1| IMP dehydrogenase [Zea mays]
Length = 232
Score = 230 bits (587), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 110/146 (75%), Positives = 130/146 (89%)
Query: 73 ANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLV 132
A+ A S+G Y VGD MT +EELHVVKPTT+VD+ALE+LV+ RI+GFPVIDDDW LVG+V
Sbjct: 61 ASVAGQSTGSYRVGDVMTKREELHVVKPTTSVDDALEMLVKHRISGFPVIDDDWNLVGVV 120
Query: 133 SDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRE 192
SDYDLLALD+ISG+G A+ +FPEVDST KTF+E+QKLLSKTNGK++ D+MTPAP+VVRE
Sbjct: 121 SDYDLLALDTISGAGPAEADIFPEVDSTSKTFHEIQKLLSKTNGKVIADVMTPAPLVVRE 180
Query: 193 TTNLEDAARLLLETKYRRLPVVDADG 218
TTNLEDAARLLL TKYRRLPVVD+ G
Sbjct: 181 TTNLEDAARLLLVTKYRRLPVVDSSG 206
>gi|356499765|ref|XP_003518707.1| PREDICTED: CBS domain-containing protein CBSX1, chloroplastic-like
[Glycine max]
Length = 225
Score = 228 bits (582), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 115/170 (67%), Positives = 137/170 (80%), Gaps = 3/170 (1%)
Query: 52 SSDRVSALRR---SSAVFASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEAL 108
SS V RR SS + + T NS ++G YTV DFMT K++LHVVK TTTVDEAL
Sbjct: 32 SSSAVPKRRRFSNSSGFRLASSQTVNSVPRANGTYTVSDFMTKKQDLHVVKTTTTVDEAL 91
Query: 109 EILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQ 168
E LV RI+G PVID+DW LVG+VSDYDLLA+DSISG ++D ++FP+VDSTWKTFNE+Q
Sbjct: 92 EALVNNRISGLPVIDEDWNLVGVVSDYDLLAIDSISGGPQSDANLFPDVDSTWKTFNELQ 151
Query: 169 KLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADG 218
KLLSKTNG++VGDLMTP P+VV E+T+LE+AARLLLETKYRRLPVVD DG
Sbjct: 152 KLLSKTNGQVVGDLMTPTPLVVHESTSLEEAARLLLETKYRRLPVVDDDG 201
Score = 42.0 bits (97), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 32/49 (65%), Gaps = 2/49 (4%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVS 133
VGD MT VV +T+++EA +L+E + PV+DDD KLVGL++
Sbjct: 162 VGDLMTPTP--LVVHESTSLEEAARLLLETKYRRLPVVDDDGKLVGLIT 208
>gi|357150779|ref|XP_003575573.1| PREDICTED: CBS domain-containing protein CBSX1, chloroplastic-like
[Brachypodium distachyon]
Length = 230
Score = 228 bits (581), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 107/141 (75%), Positives = 127/141 (90%), Gaps = 2/141 (1%)
Query: 80 SGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 139
+GVYTVGDFMT K+ LHVVKP+T+VDEALE+LV+ RI+GFPVIDD+WKLVG+VSDYDLLA
Sbjct: 64 NGVYTVGDFMTKKDNLHVVKPSTSVDEALEMLVQHRISGFPVIDDNWKLVGVVSDYDLLA 123
Query: 140 LDSISGSGRADN--SMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLE 197
LDS++G G AD SMFPEVDSTWKTF E+Q+LLSKTNGK++ D+MTP P+VVRETTNL+
Sbjct: 124 LDSMAGCGLADKNTSMFPEVDSTWKTFREIQRLLSKTNGKVISDVMTPTPLVVRETTNLD 183
Query: 198 DAARLLLETKYRRLPVVDADG 218
AARLLLETKY RLPVV++ G
Sbjct: 184 AAARLLLETKYHRLPVVNSTG 204
>gi|388507816|gb|AFK41974.1| unknown [Medicago truncatula]
Length = 221
Score = 227 bits (578), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 109/147 (74%), Positives = 128/147 (87%), Gaps = 2/147 (1%)
Query: 72 TANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGL 131
T NS ++G YTV DFMT K LHVVK TT+VDEALE LV+ RI+G PVID++W LVG+
Sbjct: 51 TVNSVPRANGTYTVSDFMTKKHNLHVVKTTTSVDEALEALVKNRISGLPVIDEEWNLVGV 110
Query: 132 VSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVR 191
VSDYDLLA+D+ISGS +D S+FP+VDSTWKTFNE+QKLLSKTNGK+VGDLMTP+P+VV
Sbjct: 111 VSDYDLLAIDTISGS--SDASLFPDVDSTWKTFNEIQKLLSKTNGKVVGDLMTPSPLVVH 168
Query: 192 ETTNLEDAARLLLETKYRRLPVVDADG 218
E+T+LEDAARLLLETKYRRLPVVD DG
Sbjct: 169 ESTSLEDAARLLLETKYRRLPVVDKDG 195
Score = 37.7 bits (86), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 31/49 (63%), Gaps = 2/49 (4%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVS 133
VGD MT VV +T++++A +L+E + PV+D D KLVGL++
Sbjct: 156 VGDLMTPSPL--VVHESTSLEDAARLLLETKYRRLPVVDKDGKLVGLIT 202
>gi|294462367|gb|ADE76732.1| unknown [Picea sitchensis]
Length = 252
Score = 225 bits (573), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 107/149 (71%), Positives = 123/149 (82%)
Query: 70 TLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLV 129
TL A P V+TVGDFMT KE L VVKPTT VDEA+E LV RITG PV+D+DWKLV
Sbjct: 82 TLMATDVPPKHEVFTVGDFMTRKENLIVVKPTTMVDEAMESLVANRITGLPVVDNDWKLV 141
Query: 130 GLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVV 189
G+VSDYDLLALDSISG+GR + FP+V STWK FNE+Q LL+KTNGK+V ++MTP+P+V
Sbjct: 142 GVVSDYDLLALDSISGAGRTETGFFPQVGSTWKAFNELQNLLNKTNGKIVAEVMTPSPLV 201
Query: 190 VRETTNLEDAARLLLETKYRRLPVVDADG 218
+RETTNLEDAARLLLETKYRRLPVVD G
Sbjct: 202 IRETTNLEDAARLLLETKYRRLPVVDNSG 230
>gi|356624493|pdb|3SL7|A Chain A, Crystal Structure Of Cbs-Pair Protein, Cbsx2 From
Arabidopsis Thaliana
gi|356624494|pdb|3SL7|B Chain B, Crystal Structure Of Cbs-Pair Protein, Cbsx2 From
Arabidopsis Thaliana
Length = 180
Score = 222 bits (566), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 103/136 (75%), Positives = 125/136 (91%)
Query: 83 YTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS 142
YTVGDF T ++ LHVVKP+T+VD+ALE+LVEK++TG PVIDD+W LVG+VSDYDLLALDS
Sbjct: 4 YTVGDFXTPRQNLHVVKPSTSVDDALELLVEKKVTGLPVIDDNWTLVGVVSDYDLLALDS 63
Query: 143 ISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARL 202
ISG + D ++FP+VDSTWKTFNE+QKL+SKT GK+VGDL TP+P+VVR++TNLEDAARL
Sbjct: 64 ISGRSQNDTNLFPDVDSTWKTFNELQKLISKTYGKVVGDLXTPSPLVVRDSTNLEDAARL 123
Query: 203 LLETKYRRLPVVDADG 218
LLETK+RRLPVVDADG
Sbjct: 124 LLETKFRRLPVVDADG 139
Score = 45.8 bits (107), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 50/83 (60%), Gaps = 10/83 (12%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL--AL-- 140
VGD T VV+ +T +++A +L+E + PV+D D KL+G+++ +++ AL
Sbjct: 100 VGDLXTPSP--LVVRDSTNLEDAARLLLETKFRRLPVVDADGKLIGILTRGNVVRAALQI 157
Query: 141 ----DSISGSGRADNSMFPEVDS 159
DSISG + D ++FP+VDS
Sbjct: 158 KRNADSISGRSQNDTNLFPDVDS 180
>gi|363808222|ref|NP_001242233.1| uncharacterized protein LOC100781400 [Glycine max]
gi|255647096|gb|ACU24016.1| unknown [Glycine max]
Length = 222
Score = 221 bits (563), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 108/157 (68%), Positives = 128/157 (81%)
Query: 62 SSAVFASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPV 121
SS + + T NS +G YTV DF T K++LHVVK TTTVDEALE LV RI+G PV
Sbjct: 44 SSGFRLASSQTVNSVPRGNGTYTVADFATKKQDLHVVKTTTTVDEALEALVNYRISGLPV 103
Query: 122 IDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGD 181
ID+ W LVG+VSDYDLLA+DSISG ++D ++FP VDSTWKTFNE+QKLLSKTNG++VGD
Sbjct: 104 IDEVWNLVGVVSDYDLLAIDSISGGPQSDANLFPNVDSTWKTFNELQKLLSKTNGQVVGD 163
Query: 182 LMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADG 218
LMTP P+VV E+T+LE+AARLLLETKYRRLPVVD DG
Sbjct: 164 LMTPTPLVVHESTSLEEAARLLLETKYRRLPVVDDDG 200
Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 32/49 (65%), Gaps = 2/49 (4%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVS 133
VGD MT VV +T+++EA +L+E + PV+DDD KLVGL++
Sbjct: 161 VGDLMTPTP--LVVHESTSLEEAARLLLETKYRRLPVVDDDGKLVGLIT 207
>gi|224103629|ref|XP_002313129.1| predicted protein [Populus trichocarpa]
gi|222849537|gb|EEE87084.1| predicted protein [Populus trichocarpa]
Length = 163
Score = 220 bits (560), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 107/138 (77%), Positives = 120/138 (86%), Gaps = 1/138 (0%)
Query: 82 VYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALD 141
++TVGDFMT +E+LHV K TTVDEALE LVEKRITGFPVIDD+WKLVG+VSDYDLL L
Sbjct: 1 IHTVGDFMTKREDLHVFKANTTVDEALEALVEKRITGFPVIDDNWKLVGVVSDYDLLVLG 60
Query: 142 SISGSG-RADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAA 200
SISGS + D ++FP VDS+WKTFNE+QKLL K NGK+VGDLMTP P+VV ETTNLEDA
Sbjct: 61 SISGSSCQNDTNLFPNVDSSWKTFNELQKLLIKNNGKVVGDLMTPNPLVVYETTNLEDAV 120
Query: 201 RLLLETKYRRLPVVDADG 218
RLLLETKYRRLPVVD DG
Sbjct: 121 RLLLETKYRRLPVVDNDG 138
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 35/54 (64%), Gaps = 2/54 (3%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 138
VGD MT VV TT +++A+ +L+E + PV+D+D KLVG+++ D++
Sbjct: 99 VGDLMTPNP--LVVYETTNLEDAVRLLLETKYRRLPVVDNDGKLVGIITRGDIV 150
>gi|313235700|emb|CBY11152.1| unnamed protein product [Oikopleura dioica]
Length = 158
Score = 219 bits (559), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 107/108 (99%), Positives = 107/108 (99%)
Query: 111 LVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKL 170
L EKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKL
Sbjct: 24 LYEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKL 83
Query: 171 LSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADG 218
LSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADG
Sbjct: 84 LSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADG 131
Score = 36.6 bits (83), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 31/49 (63%), Gaps = 2/49 (4%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVS 133
VGD MT VV+ TT +++A +L+E + PV+D D KLVG+++
Sbjct: 92 VGDLMTPAP--VVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIIT 138
>gi|238008544|gb|ACR35307.1| unknown [Zea mays]
gi|413922006|gb|AFW61938.1| hypothetical protein ZEAMMB73_004773 [Zea mays]
Length = 156
Score = 219 bits (559), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 103/130 (79%), Positives = 121/130 (93%)
Query: 89 MTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGR 148
MT +EELHVVKPTT+VD+ALE+LV+ RI+GFPVIDDDW LVG+VSDYDLLALD+ISG+G
Sbjct: 1 MTKREELHVVKPTTSVDDALEMLVKHRISGFPVIDDDWNLVGVVSDYDLLALDTISGAGP 60
Query: 149 ADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKY 208
A+ +FPEVDSTWKTF+E+QKLLSKTNGK++ D+MTPAP+VVRETTNLEDAARLLL TKY
Sbjct: 61 AEADIFPEVDSTWKTFHEIQKLLSKTNGKVIADVMTPAPLVVRETTNLEDAARLLLVTKY 120
Query: 209 RRLPVVDADG 218
RRLPVVD+ G
Sbjct: 121 RRLPVVDSSG 130
>gi|442570760|pdb|4GQW|A Chain A, Crystal Structure Of Cbs-pair Protein, Cbsx1 (loop
Deletion) From Arabidopsis Thaliana
Length = 152
Score = 219 bits (558), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 110/139 (79%), Positives = 119/139 (85%), Gaps = 14/139 (10%)
Query: 80 SGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 139
SGVYTVG+FMT KE+LHVVKPTTTVDEALE+LVE RITGFPVID+DWKLVGLVSDYDLLA
Sbjct: 2 SGVYTVGEFMTKKEDLHVVKPTTTVDEALELLVENRITGFPVIDEDWKLVGLVSDYDLLA 61
Query: 140 LDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDA 199
LDS DSTWKTFN VQKLLSKTNGK+VGDLMTPAP+VV E TNLEDA
Sbjct: 62 LDS--------------GDSTWKTFNAVQKLLSKTNGKLVGDLMTPAPLVVEEKTNLEDA 107
Query: 200 ARLLLETKYRRLPVVDADG 218
A++LLETKYRRLPVVD+DG
Sbjct: 108 AKILLETKYRRLPVVDSDG 126
>gi|413922005|gb|AFW61937.1| hypothetical protein ZEAMMB73_004773 [Zea mays]
Length = 260
Score = 219 bits (557), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 111/174 (63%), Positives = 131/174 (75%), Gaps = 28/174 (16%)
Query: 73 ANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDE-------------------------- 106
A+ A S+G Y VGD MT +EELHVVKPTT+VD+
Sbjct: 61 ASVAGQSTGSYRVGDVMTKREELHVVKPTTSVDDGALFLICCTCLPYFRSVERDHSILLF 120
Query: 107 --ALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTF 164
ALE+LV+ RI+GFPVIDDDW LVG+VSDYDLLALD+ISG+G A+ +FPEVDSTWKTF
Sbjct: 121 FAALEMLVKHRISGFPVIDDDWNLVGVVSDYDLLALDTISGAGPAEADIFPEVDSTWKTF 180
Query: 165 NEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADG 218
+E+QKLLSKTNGK++ D+MTPAP+VVRETTNLEDAARLLL TKYRRLPVVD+ G
Sbjct: 181 HEIQKLLSKTNGKVIADVMTPAPLVVRETTNLEDAARLLLVTKYRRLPVVDSSG 234
>gi|226506150|ref|NP_001147441.1| cystathionin beta synthase protein [Zea mays]
gi|195611422|gb|ACG27541.1| cystathionin beta synthase protein [Zea mays]
Length = 227
Score = 212 bits (540), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 99/138 (71%), Positives = 122/138 (88%), Gaps = 2/138 (1%)
Query: 83 YTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS 142
YTVGDFMTT++ LHVV+PTT VD+ALE+LV+ RI+GFPV+DDDW LVG+VSDYDLLALDS
Sbjct: 64 YTVGDFMTTRDNLHVVQPTTPVDQALELLVQHRISGFPVVDDDWNLVGVVSDYDLLALDS 123
Query: 143 ISGSGRADNS--MFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAA 200
+SG+ AD S MFP+VDSTWKTF+E+Q++LSKTNGK++GD+MT +P+ VR TNL+ A
Sbjct: 124 MSGNELADTSTNMFPDVDSTWKTFHELQRILSKTNGKVIGDVMTSSPLAVRINTNLDAAT 183
Query: 201 RLLLETKYRRLPVVDADG 218
RLLLETKYRRLPVVD+ G
Sbjct: 184 RLLLETKYRRLPVVDSMG 201
>gi|115477978|ref|NP_001062584.1| Os09g0115500 [Oryza sativa Japonica Group]
gi|46389988|dbj|BAD16230.1| CBS domain containing protein-like [Oryza sativa Japonica Group]
gi|113630817|dbj|BAF24498.1| Os09g0115500 [Oryza sativa Japonica Group]
gi|215686955|dbj|BAG89764.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215692644|dbj|BAG88064.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218201664|gb|EEC84091.1| hypothetical protein OsI_30399 [Oryza sativa Indica Group]
gi|222641067|gb|EEE69199.1| hypothetical protein OsJ_28393 [Oryza sativa Japonica Group]
Length = 227
Score = 210 bits (535), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 101/142 (71%), Positives = 121/142 (85%), Gaps = 2/142 (1%)
Query: 79 SSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 138
++GVYTVGDFMT + LHVV P T+VDEALE LV+ +I+GFPV+DD KLVG+VSDYDLL
Sbjct: 60 NNGVYTVGDFMTKRPNLHVVTPATSVDEALETLVQHKISGFPVVDDTGKLVGVVSDYDLL 119
Query: 139 ALDSISGSGRA--DNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNL 196
ALDSISGSG + SMFPEVDSTWKTF E+Q+LLSKTNGK++ D+MT +P+ VRE+TNL
Sbjct: 120 ALDSISGSGLTGTNTSMFPEVDSTWKTFREIQRLLSKTNGKVIADVMTYSPLAVRESTNL 179
Query: 197 EDAARLLLETKYRRLPVVDADG 218
+ A RLLLETKYRRLPVVD+ G
Sbjct: 180 DAATRLLLETKYRRLPVVDSTG 201
>gi|414587994|tpg|DAA38565.1| TPA: cystathionin beta synthase protein [Zea mays]
Length = 227
Score = 210 bits (535), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 98/138 (71%), Positives = 121/138 (87%), Gaps = 2/138 (1%)
Query: 83 YTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS 142
YTVGDFMT ++ LHVV+PTT VD+ALE+LV+ RI+GFPV+DDDW LVG+VSDYDLLALDS
Sbjct: 64 YTVGDFMTRRDNLHVVQPTTPVDQALELLVQHRISGFPVVDDDWNLVGVVSDYDLLALDS 123
Query: 143 ISGSGRADNS--MFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAA 200
+SG+ AD S MFP+VDSTWKTF+E+Q++LSKTNGK++GD+MT +P+ VR TNL+ A
Sbjct: 124 MSGNELADTSTNMFPDVDSTWKTFHELQRILSKTNGKVIGDVMTSSPLAVRINTNLDAAT 183
Query: 201 RLLLETKYRRLPVVDADG 218
RLLLETKYRRLPVVD+ G
Sbjct: 184 RLLLETKYRRLPVVDSMG 201
>gi|413922007|gb|AFW61939.1| hypothetical protein ZEAMMB73_004773 [Zea mays]
Length = 184
Score = 204 bits (518), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 103/158 (65%), Positives = 121/158 (76%), Gaps = 28/158 (17%)
Query: 89 MTTKEELHVVKPTTTVDE----------------------------ALEILVEKRITGFP 120
MT +EELHVVKPTT+VD+ ALE+LV+ RI+GFP
Sbjct: 1 MTKREELHVVKPTTSVDDGALFLICCTCLPYFRSVERDHSILLFFAALEMLVKHRISGFP 60
Query: 121 VIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVG 180
VIDDDW LVG+VSDYDLLALD+ISG+G A+ +FPEVDSTWKTF+E+QKLLSKTNGK++
Sbjct: 61 VIDDDWNLVGVVSDYDLLALDTISGAGPAEADIFPEVDSTWKTFHEIQKLLSKTNGKVIA 120
Query: 181 DLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADG 218
D+MTPAP+VVRETTNLEDAARLLL TKYRRLPVVD+ G
Sbjct: 121 DVMTPAPLVVRETTNLEDAARLLLVTKYRRLPVVDSSG 158
>gi|449438390|ref|XP_004136971.1| PREDICTED: CBS domain-containing protein CBSX2, chloroplastic-like
[Cucumis sativus]
Length = 215
Score = 203 bits (516), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 104/174 (59%), Positives = 132/174 (75%), Gaps = 2/174 (1%)
Query: 47 SVLATSSDRVSALRRSSAVFA-SGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVD 105
S L T+ R + R A SG ++S +G Y VGDFMT K L V+KP+T+V+
Sbjct: 16 SRLPTTQLRHAGYRSPVVALAFSGHRVSSSIPFRNGSYAVGDFMTKKGNLQVLKPSTSVE 75
Query: 106 EALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRAD-NSMFPEVDSTWKTF 164
EALE+LVEK ++GFPV+DDDWKLVG+VSDYDLLALDSISG G D ++FP+V+ +W++F
Sbjct: 76 EALEVLVEKSLSGFPVVDDDWKLVGVVSDYDLLALDSISGVGGGDIINIFPDVNCSWESF 135
Query: 165 NEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADG 218
+QKLLSK NG++VGDLMTPAP+VV ET N E+AARLLLETK+ RLPVVD +G
Sbjct: 136 KLIQKLLSKKNGEVVGDLMTPAPLVVSETMNFENAARLLLETKFHRLPVVDCEG 189
>gi|171452350|dbj|BAG15866.1| hypothetical protein [Bruguiera gymnorhiza]
Length = 237
Score = 201 bits (511), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 97/152 (63%), Positives = 120/152 (78%)
Query: 66 FASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDD 125
F+ T AP Y VG+FM KE+L V+K TTTVDEAL LVE +TGFPVIDDD
Sbjct: 59 FSPAFSTNPVPAPREQTYKVGNFMIKKEDLLVLKTTTTVDEALVALVEDSVTGFPVIDDD 118
Query: 126 WKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTP 185
WKLVG+VSDYD+LA+DSISG + D ++FP+VD +WKTFNE++K+L KT+GK+VGDLMTP
Sbjct: 119 WKLVGVVSDYDILAIDSISGCSQIDRNVFPDVDLSWKTFNELRKILMKTHGKVVGDLMTP 178
Query: 186 APVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
P+VV ETT++E ARLLL+TKY RLPVVD+D
Sbjct: 179 NPLVVHETTDIETVARLLLDTKYHRLPVVDSD 210
>gi|168027670|ref|XP_001766352.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682261|gb|EDQ68680.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 260
Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 100/159 (62%), Positives = 116/159 (72%)
Query: 60 RRSSAVFASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGF 119
R SS T+T N YTVGD+MT EL+ TT+DEALE+LVEKRITG
Sbjct: 62 RGSSFPLPRSTMTENPTPQKQETYTVGDYMTPVSELYCATVNTTIDEALEVLVEKRITGM 121
Query: 120 PVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMV 179
PVIDD LVG+VSDYDLLALDSISG + + S+FPE TWK F E+QKLL KTNGK V
Sbjct: 122 PVIDDFGALVGVVSDYDLLALDSISGQRQPETSLFPEAGRTWKAFKEIQKLLIKTNGKTV 181
Query: 180 GDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADG 218
GD+MTP+P+VV E TNLEDAAR+LL+TK+RRLPVV DG
Sbjct: 182 GDVMTPSPLVVSEQTNLEDAARVLLDTKFRRLPVVGDDG 220
>gi|2911050|emb|CAA17560.1| putative protein [Arabidopsis thaliana]
gi|7270361|emb|CAB80129.1| putative protein [Arabidopsis thaliana]
Length = 249
Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 110/194 (56%), Positives = 133/194 (68%), Gaps = 35/194 (18%)
Query: 60 RRSSAVFASGTLTANSAAPSS-----------GVYTVGDFMTTKEELHVVKPTTTVDEAL 108
RRSS S T++A AAP+S G YTVGDFMT ++ LHVVKP+T+VD+AL
Sbjct: 43 RRSSTFSPSITVSAFFAAPASVNNNNSVPAKNGGYTVGDFMTPRQNLHVVKPSTSVDDAL 102
Query: 109 EILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVD---------- 158
E+LVEK++TG PVIDD+W LVG+VSDYDLLALDSIS S+ V
Sbjct: 103 ELLVEKKVTGLPVIDDNWTLVGVVSDYDLLALDSISVKMIQTCSLMSTVPGKTIVCFICM 162
Query: 159 --------------STWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
S +TFNE+QKL+SKT GK+VGDLMTP+P+VVR++TNLEDAARLLL
Sbjct: 163 NFLGMRFTYIMLEFSFGQTFNELQKLISKTYGKVVGDLMTPSPLVVRDSTNLEDAARLLL 222
Query: 205 ETKYRRLPVVDADG 218
ETK+RRLPVVDADG
Sbjct: 223 ETKFRRLPVVDADG 236
Score = 40.8 bits (94), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 31/50 (62%), Gaps = 3/50 (6%)
Query: 172 SKTNGKMVGDLMTPAP--VVVRETTNLEDAARLLLETKYRRLPVVDADGW 219
+K G VGD MTP VV+ +T+++DA LL+E K LPV+D D W
Sbjct: 72 AKNGGYTVGDFMTPRQNLHVVKPSTSVDDALELLVEKKVTGLPVID-DNW 120
>gi|168039489|ref|XP_001772230.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676561|gb|EDQ63043.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 175
Score = 195 bits (495), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 95/136 (69%), Positives = 111/136 (81%)
Query: 83 YTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS 142
YTVGD+MT +L+ TT+DEALE+LVEKRITG PVIDD LVG+VSDYDLLALDS
Sbjct: 1 YTVGDYMTPVSDLYCATVNTTIDEALEVLVEKRITGMPVIDDAGALVGVVSDYDLLALDS 60
Query: 143 ISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARL 202
ISG + + S+FPE TWK F E+QKLL KTNGKMVGD+MTP+P+VVRE TNLEDAAR+
Sbjct: 61 ISGQRQPETSLFPEAGRTWKAFREIQKLLVKTNGKMVGDVMTPSPLVVREHTNLEDAARV 120
Query: 203 LLETKYRRLPVVDADG 218
LL+TK+RRLPVV DG
Sbjct: 121 LLDTKFRRLPVVGDDG 136
>gi|168024159|ref|XP_001764604.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684182|gb|EDQ70586.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 176
Score = 189 bits (480), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 92/137 (67%), Positives = 111/137 (81%), Gaps = 1/137 (0%)
Query: 83 YTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS 142
YTVGDFMT EL+ TT+DEALE+LV++RITG PV+DD LVG+VSDYDLLALDS
Sbjct: 1 YTVGDFMTPMTELYCATENTTIDEALEVLVDRRITGMPVVDDTGALVGVVSDYDLLALDS 60
Query: 143 ISGSGRA-DNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAAR 201
ISG R + S+FPE TWK F E+QKLL KTNGK +GD+MTP+P+VVR+ TNLEDAA+
Sbjct: 61 ISGWQRQPETSLFPEAGRTWKAFKEIQKLLVKTNGKTIGDVMTPSPLVVRKQTNLEDAAK 120
Query: 202 LLLETKYRRLPVVDADG 218
+LL+TK+RRLPVVD DG
Sbjct: 121 VLLDTKFRRLPVVDQDG 137
Score = 36.6 bits (83), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 46/83 (55%), Gaps = 12/83 (14%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL----- 138
T+GD MT VV+ T +++A ++L++ + PV+D D KLVGL++ +++
Sbjct: 97 TIGDVMTPSP--LVVRKQTNLEDAAKVLLDTKFRRLPVVDQDGKLVGLLTRGNVVRAALY 154
Query: 139 ----ALDSISGSGRADNSMFPEV 157
A D++ G +A +F E+
Sbjct: 155 MKRTAEDALGGK-KAAEDIFKEI 176
>gi|302762132|ref|XP_002964488.1| hypothetical protein SELMODRAFT_81478 [Selaginella moellendorffii]
gi|302820740|ref|XP_002992036.1| hypothetical protein SELMODRAFT_134636 [Selaginella moellendorffii]
gi|300140158|gb|EFJ06885.1| hypothetical protein SELMODRAFT_134636 [Selaginella moellendorffii]
gi|300168217|gb|EFJ34821.1| hypothetical protein SELMODRAFT_81478 [Selaginella moellendorffii]
Length = 165
Score = 189 bits (479), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 92/136 (67%), Positives = 112/136 (82%)
Query: 83 YTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS 142
YTV DFMT +++L V+ +TTVD+AL++LV+ RITG PVID+D KLVG+VSDYDLLALDS
Sbjct: 1 YTVCDFMTPRKDLFCVRVSTTVDDALKLLVDNRITGLPVIDEDGKLVGVVSDYDLLALDS 60
Query: 143 ISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARL 202
ISG + NS+FPE STWK F E+Q LL+KT GK VGDLMTP+P+VVR N+EDAAR+
Sbjct: 61 ISGKRPSTNSLFPEAGSTWKAFKEIQHLLTKTQGKTVGDLMTPSPLVVRVDMNIEDAARI 120
Query: 203 LLETKYRRLPVVDADG 218
LL+TKYRRLPVVD G
Sbjct: 121 LLDTKYRRLPVVDECG 136
>gi|293334723|ref|NP_001168672.1| uncharacterized protein LOC100382460 [Zea mays]
gi|223950107|gb|ACN29137.1| unknown [Zea mays]
gi|414587995|tpg|DAA38566.1| TPA: hypothetical protein ZEAMMB73_092445 [Zea mays]
Length = 196
Score = 171 bits (432), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 77/110 (70%), Positives = 98/110 (89%), Gaps = 2/110 (1%)
Query: 83 YTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS 142
YTVGDFMT ++ LHVV+PTT VD+ALE+LV+ RI+GFPV+DDDW LVG+VSDYDLLALDS
Sbjct: 64 YTVGDFMTRRDNLHVVQPTTPVDQALELLVQHRISGFPVVDDDWNLVGVVSDYDLLALDS 123
Query: 143 ISGSGRADNS--MFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVV 190
+SG+ AD S MFP+VDSTWKTF+E+Q++LSKTNGK++GD+MT +P+ V
Sbjct: 124 MSGNELADTSTNMFPDVDSTWKTFHELQRILSKTNGKVIGDVMTSSPLAV 173
>gi|159479170|ref|XP_001697671.1| hypothetical protein CHLREDRAFT_185012 [Chlamydomonas reinhardtii]
gi|158274281|gb|EDP00065.1| predicted protein [Chlamydomonas reinhardtii]
Length = 197
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 80/168 (47%), Positives = 105/168 (62%), Gaps = 9/168 (5%)
Query: 58 ALRRSSAVFASG--TLTANSAAPSSG-----VYTVGDFMTTKEELHVVKPTTTVDEALEI 110
A R S AV G L A P + + TV D M++ L+ V P TVD ALEI
Sbjct: 5 AQRASHAVRPMGPRRLQARRVVPRAASTELSLSTVKDVMSSGT-LYSVSPEDTVDAALEI 63
Query: 111 LVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKL 170
LV RITG PV+D + ++VG+VSD+DLLALD++ G DN +FP + +W+ F EV+K+
Sbjct: 64 LVNNRITGLPVLDTEGRVVGVVSDFDLLALDAV-GRVNDDNMLFPSAEQSWQAFKEVKKM 122
Query: 171 LSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADG 218
L+KT GK + D+MTP P+ VR TNL DA +L+ K RRLPVVD G
Sbjct: 123 LAKTAGKKIKDVMTPKPITVRPETNLNDATSILISKKIRRLPVVDEHG 170
Score = 41.2 bits (95), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 31/49 (63%), Gaps = 2/49 (4%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVS 133
+ D MT K V+P T +++A IL+ K+I PV+D+ KLVGL+S
Sbjct: 131 IKDVMTPKP--ITVRPETNLNDATSILISKKIRRLPVVDEHGKLVGLIS 177
>gi|384246295|gb|EIE19786.1| cystathionine beta-synthase [Coccomyxa subellipsoidea C-169]
Length = 155
Score = 140 bits (352), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 66/128 (51%), Positives = 97/128 (75%), Gaps = 1/128 (0%)
Query: 91 TKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRAD 150
TK ++ + T+VDEALE++V+ R++G PV+D+ ++VG+VSDYDLL+LD++SG + +
Sbjct: 2 TKGKIFSARVNTSVDEALELMVKHRVSGLPVLDESNRVVGVVSDYDLLSLDAVSGKMQ-E 60
Query: 151 NSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRR 210
FP D+ W +F+EVQKL+ K G++VGD+MT PVVVR T++ AAR+LL+T+ RR
Sbjct: 61 AGFFPRADTNWDSFHEVQKLVLKNAGRVVGDVMTENPVVVRANTDMTSAARMLLDTRVRR 120
Query: 211 LPVVDADG 218
LPVVD DG
Sbjct: 121 LPVVDDDG 128
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 36/60 (60%), Gaps = 4/60 (6%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL--ALD 141
VGD MT E VV+ T + A +L++ R+ PV+DDD +LVG+ + D++ ALD
Sbjct: 88 VVGDVMT--ENPVVVRANTDMTSAARMLLDTRVRRLPVVDDDGRLVGIFTRGDVIKAALD 145
>gi|302762130|ref|XP_002964487.1| hypothetical protein SELMODRAFT_81368 [Selaginella moellendorffii]
gi|300168216|gb|EFJ34820.1| hypothetical protein SELMODRAFT_81368 [Selaginella moellendorffii]
Length = 168
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 67/109 (61%), Positives = 85/109 (77%)
Query: 83 YTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS 142
YT+ +F+ K++ V+ +TTVD+AL++L++ RITG PVID D KLVG+VSDYDLLALDS
Sbjct: 5 YTICNFIMPKKDPFCVQVSTTVDDALKLLMDNRITGLPVIDKDRKLVGVVSDYDLLALDS 64
Query: 143 ISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVR 191
ISG + NS+FPE STWK F E+Q L +KT GK VGDLMTP P+VVR
Sbjct: 65 ISGKRPSTNSLFPEAGSTWKAFKEIQHLPTKTQGKTVGDLMTPLPLVVR 113
>gi|302854300|ref|XP_002958659.1| hypothetical protein VOLCADRAFT_99959 [Volvox carteri f.
nagariensis]
gi|300255984|gb|EFJ40262.1| hypothetical protein VOLCADRAFT_99959 [Volvox carteri f.
nagariensis]
Length = 155
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 64/119 (53%), Positives = 88/119 (73%), Gaps = 1/119 (0%)
Query: 100 PTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDS 159
P TVD ALE+LV+ RITG PV+D + ++VG+VSD+DLLALD++ G D ++FP D
Sbjct: 11 PEDTVDSALELLVQNRITGLPVVDAENRVVGVVSDFDLLALDAV-GRVNEDQNLFPSADQ 69
Query: 160 TWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADG 218
+W+ F EV+K+L+K+ GK + D+MT P+ VR TNLEDA +L+ K RRLPVVD+DG
Sbjct: 70 SWQAFKEVKKMLAKSAGKKIKDVMTVQPITVRPETNLEDATNILIVKKIRRLPVVDSDG 128
Score = 40.8 bits (94), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 35/57 (61%), Gaps = 3/57 (5%)
Query: 77 APSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVS 133
A S+G + D MT + V+P T +++A IL+ K+I PV+D D KLVGL+S
Sbjct: 82 AKSAG-KKIKDVMTVQP--ITVRPETNLEDATNILIVKKIRRLPVVDSDGKLVGLIS 135
>gi|302820742|ref|XP_002992037.1| hypothetical protein SELMODRAFT_430314 [Selaginella moellendorffii]
gi|300140159|gb|EFJ06886.1| hypothetical protein SELMODRAFT_430314 [Selaginella moellendorffii]
Length = 154
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 67/123 (54%), Positives = 83/123 (67%), Gaps = 11/123 (8%)
Query: 107 ALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNE 166
AL++LV+ RITG PV D D KLVG+VSDY+LLALDSI G + NS+FPE STWK F E
Sbjct: 3 ALKLLVDNRITGLPVTDKDRKLVGVVSDYNLLALDSILGKRPSSNSLFPEAGSTWKAFKE 62
Query: 167 VQKLLSKTNGKMVGDLMTPAPVVVR-----------ETTNLEDAARLLLETKYRRLPVVD 215
+Q LL+K GK VGDLMTP P+V++ + R+LL+TKY+RLPVVD
Sbjct: 63 IQHLLTKIQGKTVGDLMTPLPLVLQTFLPYSIEISLKLLGFPLDPRILLDTKYQRLPVVD 122
Query: 216 ADG 218
G
Sbjct: 123 ESG 125
>gi|357475265|ref|XP_003607918.1| CBS domain-containing protein, putative [Medicago truncatula]
gi|355508973|gb|AES90115.1| CBS domain-containing protein, putative [Medicago truncatula]
Length = 144
Score = 113 bits (283), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 56/87 (64%), Positives = 68/87 (78%), Gaps = 2/87 (2%)
Query: 72 TANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGL 131
T NS ++G YTV DFMT K LHVVK TT+VDEALE LV+ RI+G PVID++W LVG+
Sbjct: 51 TVNSVPRANGTYTVSDFMTKKHNLHVVKTTTSVDEALEALVKNRISGLPVIDEEWNLVGV 110
Query: 132 VSDYDLLALDSISGSGRADNSMFPEVD 158
VSDYDLLA+D+ISGS +D S+ P VD
Sbjct: 111 VSDYDLLAIDTISGS--SDASLIPIVD 135
>gi|357475267|ref|XP_003607919.1| CBS domain-containing protein, putative [Medicago truncatula]
gi|355508974|gb|AES90116.1| CBS domain-containing protein, putative [Medicago truncatula]
Length = 77
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 47/70 (67%), Positives = 57/70 (81%), Gaps = 2/70 (2%)
Query: 89 MTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGR 148
MT K LHVVK TT+VDEALE LV+ RI+G PVID++W LVG+VSDYDLLA+D+ISGS
Sbjct: 1 MTKKHNLHVVKTTTSVDEALEALVKNRISGLPVIDEEWNLVGVVSDYDLLAIDTISGS-- 58
Query: 149 ADNSMFPEVD 158
+D S+ P VD
Sbjct: 59 SDASLIPIVD 68
>gi|434395335|ref|YP_007130282.1| putative signal transduction protein with CBS domains [Gloeocapsa
sp. PCC 7428]
gi|428267176|gb|AFZ33122.1| putative signal transduction protein with CBS domains [Gloeocapsa
sp. PCC 7428]
Length = 153
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/124 (41%), Positives = 80/124 (64%), Gaps = 6/124 (4%)
Query: 97 VVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPE 156
VV+P T ++EA++IL EKRI+G PVIDDD KLVG++S+ DL+ + +G +
Sbjct: 15 VVRPETPLNEAIQILAEKRISGLPVIDDDGKLVGIISETDLMWQE----TGVTPPAYIMI 70
Query: 157 VDSTWKTFN--EVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVV 214
+DS N + ++ L K G+ VG++M+ PV V +L +AA+L+ + + RRLPV+
Sbjct: 71 LDSVIYLQNPAKYERDLHKALGQTVGEVMSSDPVTVSPDKSLREAAKLMHDREVRRLPVI 130
Query: 215 DADG 218
DA+G
Sbjct: 131 DAEG 134
Score = 37.0 bits (84), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 27/42 (64%)
Query: 177 KMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADG 218
K V ++M+ P+VVR T L +A ++L E + LPV+D DG
Sbjct: 3 KTVAEVMSRDPIVVRPETPLNEAIQILAEKRISGLPVIDDDG 44
>gi|443326695|ref|ZP_21055340.1| putative transcriptional regulator, contains C-terminal CBS domains
[Xenococcus sp. PCC 7305]
gi|442793685|gb|ELS03127.1| putative transcriptional regulator, contains C-terminal CBS domains
[Xenococcus sp. PCC 7305]
Length = 152
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/135 (38%), Positives = 76/135 (56%), Gaps = 4/135 (2%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TV D MTT VVKP T + EA+ IL E + +G PV+DD KLVG++S+ DL+ +
Sbjct: 4 TVADIMTTNP--IVVKPNTPLQEAISILAENKFSGLPVVDDAGKLVGVISESDLMWQE-- 59
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
SG MF + K + + K G+ VG++M+ P+ V ++ DAAR++
Sbjct: 60 SGIESPPYIMFLDSIIYLKNPARYNQEIHKALGQTVGEVMSDRPITVEAEQSVPDAARIM 119
Query: 204 LETKYRRLPVVDADG 218
+ K RRLPVVD +
Sbjct: 120 HDKKVRRLPVVDEEA 134
Score = 41.2 bits (95), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 27/42 (64%)
Query: 177 KMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADG 218
K V D+MT P+VV+ T L++A +L E K+ LPVVD G
Sbjct: 3 KTVADIMTTNPIVVKPNTPLQEAISILAENKFSGLPVVDDAG 44
>gi|298490018|ref|YP_003720195.1| putative signal transduction protein with CBS domains ['Nostoc
azollae' 0708]
gi|298231936|gb|ADI63072.1| putative signal transduction protein with CBS domains ['Nostoc
azollae' 0708]
Length = 152
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/135 (36%), Positives = 81/135 (60%), Gaps = 4/135 (2%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TV D M++ L V+P T + EA++IL EKRI+G PVIDD K+VG++S+ DL+ +
Sbjct: 4 TVADVMSSNPIL--VRPETPLKEAIQILAEKRISGLPVIDDAGKVVGIISETDLMWQE-- 59
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
+G MF + + ++ L K G+ VG++M+ +P+ + L++AA+++
Sbjct: 60 TGVTPPAYIMFLDSVIYLQNPGAYERDLHKALGQTVGEVMSKSPITITPDKPLKEAAKII 119
Query: 204 LETKYRRLPVVDADG 218
E K RLPV+D+ G
Sbjct: 120 QEYKVHRLPVLDSTG 134
>gi|428304476|ref|YP_007141301.1| hypothetical protein Cri9333_0874 [Crinalium epipsammum PCC 9333]
gi|428246011|gb|AFZ11791.1| CBS domain containing membrane protein [Crinalium epipsammum PCC
9333]
Length = 152
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/135 (37%), Positives = 81/135 (60%), Gaps = 4/135 (2%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TV D M+ ++ V+P T +++A++IL E+RITG PV+DD KLVG++S+ DL+ +
Sbjct: 4 TVADVMS--RDVITVQPQTPLNQAIQILAERRITGLPVVDDADKLVGVISETDLMWQE-- 59
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
+G MF + + ++ L K G+ VG++MT +V++ L++AA+L+
Sbjct: 60 TGVTPPAYIMFLDSVIYLQNPTTYERDLHKALGQTVGEVMTTEAIVIKPEKPLQEAAKLM 119
Query: 204 LETKYRRLPVVDADG 218
E RRLPVVD G
Sbjct: 120 HEKHIRRLPVVDDTG 134
Score = 41.6 bits (96), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 36/55 (65%), Gaps = 2/55 (3%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 138
TVG+ MTT E V+KP + EA +++ EK I PV+DD K++G+++ D++
Sbjct: 94 TVGEVMTT--EAIVIKPEKPLQEAAKLMHEKHIRRLPVVDDTGKVLGILTRGDII 146
>gi|357475269|ref|XP_003607920.1| CBS domain-containing protein, putative [Medicago truncatula]
gi|355508975|gb|AES90117.1| CBS domain-containing protein, putative [Medicago truncatula]
Length = 110
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/58 (63%), Positives = 44/58 (75%)
Query: 72 TANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLV 129
T NS ++G YTV DFMT K LHVVK TT+VDEALE LV+ RI+G PVID++W LV
Sbjct: 51 TVNSVPRANGTYTVSDFMTKKHNLHVVKTTTSVDEALEALVKNRISGLPVIDEEWNLV 108
>gi|304570678|ref|YP_001805580.2| hypothetical protein cce_4166 [Cyanothece sp. ATCC 51142]
gi|354552638|ref|ZP_08971946.1| CBS domain containing protein [Cyanothece sp. ATCC 51472]
gi|353555960|gb|EHC25348.1| CBS domain containing protein [Cyanothece sp. ATCC 51472]
Length = 153
Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 74/122 (60%), Gaps = 6/122 (4%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P T + EA++IL EK+I+G PV+DD KLVG++S+ DL+ + +G +
Sbjct: 16 VTPQTPLSEAVKILAEKKISGLPVVDDQGKLVGIISETDLMWQE----TGVEPPPYIMIL 71
Query: 158 DSTWKTFN--EVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVD 215
DS N +K + K G+ VG++M+ P+ ++ T +L++AA L+ E K RRLPV+D
Sbjct: 72 DSVIYLQNPARYEKEVHKALGQTVGEVMSDKPISIKGTKSLKEAAHLMHEKKIRRLPVID 131
Query: 216 AD 217
+
Sbjct: 132 EN 133
>gi|443323171|ref|ZP_21052180.1| putative transcriptional regulator, contains C-terminal CBS domains
[Gloeocapsa sp. PCC 73106]
gi|442787081|gb|ELR96805.1| putative transcriptional regulator, contains C-terminal CBS domains
[Gloeocapsa sp. PCC 73106]
Length = 144
Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 74/123 (60%), Gaps = 6/123 (4%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V+P T + EA++IL EKRI+G PV+DD+ LVG++SD DL+ + +G MF +
Sbjct: 8 VQPETPLSEAIKILAEKRISGLPVVDDEGALVGVISDTDLMWQE--TGVEPPPYIMF--L 63
Query: 158 DSTWKTFN--EVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVD 215
DS N +K + K G+ VG++MT P+ + ++ +AAR++ + RRLPV+D
Sbjct: 64 DSVIYLENPKRYEKEIHKALGQTVGEVMTSKPITITPEQSMREAARVMHDKNIRRLPVID 123
Query: 216 ADG 218
+
Sbjct: 124 TEA 126
>gi|171700533|gb|ACB53514.1| unknown [Cyanothece sp. ATCC 51142]
Length = 145
Score = 80.1 bits (196), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 74/122 (60%), Gaps = 6/122 (4%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P T + EA++IL EK+I+G PV+DD KLVG++S+ DL+ + +G +
Sbjct: 8 VTPQTPLSEAVKILAEKKISGLPVVDDQGKLVGIISETDLMWQE----TGVEPPPYIMIL 63
Query: 158 DSTWKTFN--EVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVD 215
DS N +K + K G+ VG++M+ P+ ++ T +L++AA L+ E K RRLPV+D
Sbjct: 64 DSVIYLQNPARYEKEVHKALGQTVGEVMSDKPISIKGTKSLKEAAHLMHEKKIRRLPVID 123
Query: 216 AD 217
+
Sbjct: 124 EN 125
>gi|434384451|ref|YP_007095062.1| putative transcriptional regulator, contains C-terminal CBS domains
[Chamaesiphon minutus PCC 6605]
gi|428015441|gb|AFY91535.1| putative transcriptional regulator, contains C-terminal CBS domains
[Chamaesiphon minutus PCC 6605]
Length = 152
Score = 80.1 bits (196), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 51/133 (38%), Positives = 79/133 (59%), Gaps = 4/133 (3%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D+M EL VKP+T + +A+++LV++ I+G PVIDDD KLVG++S+ DL+ +
Sbjct: 5 VADWMN--RELITVKPSTPLADAVKLLVDRHISGLPVIDDDGKLVGVISEADLMWRE--Q 60
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
G + +F +K + L K G+ VG++MTP + + T L +AAR+L
Sbjct: 61 GLEQPPYMIFLGGVIYFKNPLTYDRDLHKALGQTVGEVMTPHAISISADTTLPEAARILH 120
Query: 205 ETKYRRLPVVDAD 217
+ K RLPVVD +
Sbjct: 121 DKKIHRLPVVDEN 133
>gi|218248686|ref|YP_002374057.1| hypothetical protein PCC8801_3960 [Cyanothece sp. PCC 8801]
gi|257061751|ref|YP_003139639.1| hypothetical protein Cyan8802_4005 [Cyanothece sp. PCC 8802]
gi|218169164|gb|ACK67901.1| CBS domain containing protein [Cyanothece sp. PCC 8801]
gi|256591917|gb|ACV02804.1| CBS domain containing protein [Cyanothece sp. PCC 8802]
Length = 153
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/119 (37%), Positives = 71/119 (59%), Gaps = 6/119 (5%)
Query: 102 TTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTW 161
T + EA+ IL EKRI+G PV+DD KLVG++S+ DL+ + +G +DS
Sbjct: 20 TPLSEAIRILAEKRISGLPVVDDSGKLVGVISETDLMWQE----TGVEPPPYIMILDSVI 75
Query: 162 KTFN--EVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADG 218
N +K + K G+ VG++M+ P+ ++ + +L +AA+++ E K RRLPVVD G
Sbjct: 76 YLQNPARYEKEIHKALGQTVGEVMSNHPISIKSSQSLREAAQIMHEKKIRRLPVVDETG 134
Score = 37.7 bits (86), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 25/42 (59%)
Query: 177 KMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADG 218
K+V D+MTP + V T L +A R+L E + LPVVD G
Sbjct: 3 KIVADVMTPNAITVTRQTPLSEAIRILAEKRISGLPVVDDSG 44
>gi|354565001|ref|ZP_08984177.1| putative signal transduction protein with CBS domains [Fischerella
sp. JSC-11]
gi|353550127|gb|EHC19566.1| putative signal transduction protein with CBS domains [Fischerella
sp. JSC-11]
Length = 154
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 79/135 (58%), Gaps = 4/135 (2%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TV D M+ + VV+P T + EA++IL E+RI+G PV+DD KLVG++S+ DL+ +
Sbjct: 4 TVADVMS--RDPIVVRPETPLKEAIQILAERRISGLPVVDDAGKLVGIISETDLMWQE-- 59
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
+G MF + K ++ L K G+ VG++M+ P+ V L +AA+++
Sbjct: 60 TGVTPPAYIMFLDSVIYLKNPATYERDLHKALGQTVGEVMSKQPITVSPDKTLREAAKIM 119
Query: 204 LETKYRRLPVVDADG 218
+ RLPV+D++G
Sbjct: 120 NDRNVHRLPVLDSEG 134
>gi|16331252|ref|NP_441980.1| photosystem I assembly protein [Synechocystis sp. PCC 6803]
gi|383322995|ref|YP_005383848.1| IMP dehydrogenase [Synechocystis sp. PCC 6803 substr. GT-I]
gi|383326164|ref|YP_005387017.1| IMP dehydrogenase [Synechocystis sp. PCC 6803 substr. PCC-P]
gi|383492048|ref|YP_005409724.1| IMP dehydrogenase [Synechocystis sp. PCC 6803 substr. PCC-N]
gi|384437316|ref|YP_005652040.1| IMP dehydrogenase [Synechocystis sp. PCC 6803]
gi|451815408|ref|YP_007451860.1| IMP dehydrogenase [Synechocystis sp. PCC 6803]
gi|1001427|dbj|BAA10050.1| IMP dehydrogenase [Synechocystis sp. PCC 6803]
gi|339274348|dbj|BAK50835.1| IMP dehydrogenase [Synechocystis sp. PCC 6803]
gi|359272314|dbj|BAL29833.1| IMP dehydrogenase [Synechocystis sp. PCC 6803 substr. GT-I]
gi|359275484|dbj|BAL33002.1| IMP dehydrogenase [Synechocystis sp. PCC 6803 substr. PCC-N]
gi|359278654|dbj|BAL36171.1| IMP dehydrogenase [Synechocystis sp. PCC 6803 substr. PCC-P]
gi|407961369|dbj|BAM54609.1| photosystem I assembly protein [Bacillus subtilis BEST7613]
gi|451781377|gb|AGF52346.1| IMP dehydrogenase [Synechocystis sp. PCC 6803]
Length = 155
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/136 (38%), Positives = 76/136 (55%), Gaps = 8/136 (5%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TVG+ MT VKP T + +A+ +L E RI+G PV+DD KLVG++SD DL+ +
Sbjct: 4 TVGEVMTPNP--ITVKPDTPLQDAIRLLAENRISGMPVLDDQEKLVGVISDTDLMWQE-- 59
Query: 144 SGSGRADNSMFPEVDSTWKTFNEV--QKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAAR 201
SG M +DS N ++ L K G+ VG++M P+ + T L +AA
Sbjct: 60 SGVDTPPYVML--LDSIIYLQNPARHERELHKALGQTVGEVMNDVPISILPTQTLREAAH 117
Query: 202 LLLETKYRRLPVVDAD 217
L+ E K RRLPV++ +
Sbjct: 118 LMNEKKIRRLPVLNVE 133
Score = 40.4 bits (93), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 27/39 (69%)
Query: 177 KMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVD 215
+ VG++MTP P+ V+ T L+DA RLL E + +PV+D
Sbjct: 3 RTVGEVMTPNPITVKPDTPLQDAIRLLAENRISGMPVLD 41
>gi|428202316|ref|YP_007080905.1| putative contains C-terminal CBS domains [Pleurocapsa sp. PCC 7327]
gi|427979748|gb|AFY77348.1| putative transcriptional regulator, contains C-terminal CBS domains
[Pleurocapsa sp. PCC 7327]
Length = 153
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 78/136 (57%), Gaps = 8/136 (5%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TV D MT VKP T ++EA+++L EK I+G PV+DD KLVG++S+ DL+ +
Sbjct: 4 TVADVMTPNP--IAVKPQTPLNEAIKLLCEKHISGMPVVDDAGKLVGVISESDLMWQE-- 59
Query: 144 SGSGRADNSMFPEVDSTWKTFN--EVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAAR 201
+G +DS N +K + K G+ VG++MT P+ + +L++AAR
Sbjct: 60 --TGVEPPPYIMILDSVIYLQNPARYEKEIHKALGQTVGEVMTDKPISITPDRSLKEAAR 117
Query: 202 LLLETKYRRLPVVDAD 217
++ E K RRL VVD +
Sbjct: 118 IMHEKKIRRLVVVDGE 133
Score = 38.5 bits (88), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 25/42 (59%)
Query: 177 KMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADG 218
K V D+MTP P+ V+ T L +A +LL E +PVVD G
Sbjct: 3 KTVADVMTPNPIAVKPQTPLNEAIKLLCEKHISGMPVVDDAG 44
>gi|443309785|ref|ZP_21039472.1| putative transcriptional regulator, contains C-terminal CBS domains
[Synechocystis sp. PCC 7509]
gi|442780178|gb|ELR90384.1| putative transcriptional regulator, contains C-terminal CBS domains
[Synechocystis sp. PCC 7509]
Length = 154
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/137 (37%), Positives = 83/137 (60%), Gaps = 8/137 (5%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TV + MT+ VVKP T ++EA++I+ E+RI+G PV+ DD +LVG++S+ DL+ +
Sbjct: 4 TVAEAMTSLPV--VVKPQTPLNEAIKIMAERRISGLPVVGDDDRLVGIISETDLMWQE-- 59
Query: 144 SGSGRADNSMFPEVDSTWKTFNEV--QKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAAR 201
+G MF +DS N ++ L K G+ VG++M+ P+ + L++AA+
Sbjct: 60 TGVTPPAYIMF--LDSVIFLQNPATYERDLHKALGQTVGEVMSTDPITISADKPLKNAAQ 117
Query: 202 LLLETKYRRLPVVDADG 218
LL + RRLPVVDA+
Sbjct: 118 LLHDRDIRRLPVVDANN 134
>gi|428779471|ref|YP_007171257.1| contains C-terminal CBS domains [Dactylococcopsis salina PCC 8305]
gi|428693750|gb|AFZ49900.1| putative transcriptional regulator, contains C-terminal CBS domains
[Dactylococcopsis salina PCC 8305]
Length = 153
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/137 (38%), Positives = 80/137 (58%), Gaps = 8/137 (5%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TV D MT VV+P T + EA+++LVEK+I+G PV+D+ KLVG++S+ DL+ +
Sbjct: 4 TVADIMTANP--AVVQPETPLKEAIKLLVEKKISGLPVVDEAEKLVGVLSEADLMWQE-- 59
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQ--KLLSKTNGKMVGDLMTPAPVVVRETTNLEDAAR 201
+G F +DS N Q K L K G+ VG++M+ V + L++AA+
Sbjct: 60 --TGVETPPYFMFLDSVIYLQNPAQYDKELHKALGQTVGEVMSDRAVSITGDRPLKEAAQ 117
Query: 202 LLLETKYRRLPVVDADG 218
L+ + + RRLPVVD G
Sbjct: 118 LMHKREVRRLPVVDEAG 134
Score = 38.5 bits (88), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 26/39 (66%)
Query: 177 KMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVD 215
K V D+MT P VV+ T L++A +LL+E K LPVVD
Sbjct: 3 KTVADIMTANPAVVQPETPLKEAIKLLVEKKISGLPVVD 41
>gi|75908110|ref|YP_322406.1| signal transduction protein [Anabaena variabilis ATCC 29413]
gi|75701835|gb|ABA21511.1| Predicted signal transduction protein containing CBS domains
[Anabaena variabilis ATCC 29413]
Length = 152
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/137 (37%), Positives = 80/137 (58%), Gaps = 8/137 (5%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TV D M+ VVKP T + EA++IL E+RI+G PV+D+D KL+G++S+ DL+ +
Sbjct: 4 TVADVMSHNPV--VVKPETPLQEAIKILAERRISGLPVVDNDGKLLGIISETDLMWQE-- 59
Query: 144 SGSGRADNSMFPEVDSTWKTFNEV--QKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAAR 201
+G MF +DS N ++ L K G+ VG++M+ PV V +++ AA+
Sbjct: 60 TGVTPPAYIMF--LDSVIYLQNPAVYERDLHKALGQTVGEVMSKNPVTVSPEKSVKQAAQ 117
Query: 202 LLLETKYRRLPVVDADG 218
L+ + RLPV+D G
Sbjct: 118 LMHDRNVHRLPVLDDAG 134
Score = 40.4 bits (93), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 28/42 (66%)
Query: 177 KMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADG 218
K V D+M+ PVVV+ T L++A ++L E + LPVVD DG
Sbjct: 3 KTVADVMSHNPVVVKPETPLQEAIKILAERRISGLPVVDNDG 44
>gi|428770480|ref|YP_007162270.1| signal transduction protein [Cyanobacterium aponinum PCC 10605]
gi|428684759|gb|AFZ54226.1| putative signal transduction protein with CBS domains
[Cyanobacterium aponinum PCC 10605]
Length = 152
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 77/134 (57%), Gaps = 4/134 (2%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TVG+ MT VKP T + EA+ +LVE +I+G PVI + +LVG++S+ DL+ ++
Sbjct: 4 TVGEVMTPNP--ITVKPETPLKEAIALLVEHKISGMPVIKEGGELVGILSESDLMWQET- 60
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
G M + + N K + K G+ V D+M+ P+ + T +++AA+LL
Sbjct: 61 -GVEPPPYIMILDSIIYLQNPNRYDKEIHKALGQTVADVMSDKPITISSTKTIKEAAQLL 119
Query: 204 LETKYRRLPVVDAD 217
+ + RRLPVVD+D
Sbjct: 120 HQKQIRRLPVVDSD 133
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 27/42 (64%)
Query: 177 KMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADG 218
K VG++MTP P+ V+ T L++A LL+E K +PV+ G
Sbjct: 3 KTVGEVMTPNPITVKPETPLKEAIALLVEHKISGMPVIKEGG 44
Score = 37.7 bits (86), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 138
TV D M+ K + T T+ EA ++L +K+I PV+D D K++G+++ D++
Sbjct: 94 TVADVMSDKP--ITISSTKTIKEAAQLLHQKQIRRLPVVDSDKKIIGILTQGDII 146
>gi|17231305|ref|NP_487853.1| hypothetical protein alr3813 [Nostoc sp. PCC 7120]
gi|17132947|dbj|BAB75512.1| alr3813 [Nostoc sp. PCC 7120]
Length = 152
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/137 (37%), Positives = 80/137 (58%), Gaps = 8/137 (5%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TV D M+ VVKP T + EA++IL E+RI+G PV+D+D KL+G++S+ DL+ +
Sbjct: 4 TVADVMSHNPV--VVKPETPLQEAIKILAERRISGLPVVDNDGKLLGIISETDLMWQE-- 59
Query: 144 SGSGRADNSMFPEVDSTWKTFNEV--QKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAAR 201
+G MF +DS N ++ L K G+ VG++M+ PV V +++ AA+
Sbjct: 60 TGVTPPAYIMF--LDSVIYLQNPAVYERDLHKALGQTVGEVMSKNPVTVSPEKSVKQAAQ 117
Query: 202 LLLETKYRRLPVVDADG 218
L+ + RLPV+D G
Sbjct: 118 LMHDRNVHRLPVLDDAG 134
Score = 40.4 bits (93), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 28/42 (66%)
Query: 177 KMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADG 218
K V D+M+ PVVV+ T L++A ++L E + LPVVD DG
Sbjct: 3 KTVADVMSHNPVVVKPETPLQEAIKILAERRISGLPVVDNDG 44
>gi|414077401|ref|YP_006996719.1| hypothetical protein ANA_C12164 [Anabaena sp. 90]
gi|413970817|gb|AFW94906.1| CBS domain-containing protein [Anabaena sp. 90]
Length = 152
Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/137 (37%), Positives = 76/137 (55%), Gaps = 8/137 (5%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TV D M+ L V P T + EA++IL EK I+G PVIDD KLVG++S+ DL+ +
Sbjct: 4 TVADVMSRDPIL--VHPQTPLKEAIQILAEKHISGLPVIDDAGKLVGIISETDLMWQE-- 59
Query: 144 SGSGRADNSMFPEVDSTWKTFNEV--QKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAAR 201
+G + +DS N ++ L K G+ VG++M+ P+ + L +AA+
Sbjct: 60 --TGITPPAYIMILDSVIYLQNPATYERDLHKALGQTVGEVMSKNPLTISPDKPLREAAK 117
Query: 202 LLLETKYRRLPVVDADG 218
L+ E K RLPV+D G
Sbjct: 118 LIQEHKVHRLPVLDNAG 134
>gi|427731961|ref|YP_007078198.1| putative contains C-terminal CBS domains [Nostoc sp. PCC 7524]
gi|427367880|gb|AFY50601.1| putative transcriptional regulator, contains C-terminal CBS domains
[Nostoc sp. PCC 7524]
Length = 154
Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 79/135 (58%), Gaps = 4/135 (2%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TV D M+ E VV+P T + EA++IL E+RI+G PV+DD KL+G++S+ DL+ +
Sbjct: 4 TVADIMSP--EPIVVRPDTPLQEAIQILAERRISGLPVVDDVGKLLGIISETDLMWQE-- 59
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
+G MF + K ++ L K G++VG++M+ PV + ++ AA+L+
Sbjct: 60 TGVTPPAYIMFLDSVIYLKNPAVYERDLHKALGQIVGEVMSKNPVTITPDKTVKQAAQLM 119
Query: 204 LETKYRRLPVVDADG 218
+ RLPV+D+ G
Sbjct: 120 HDRNVHRLPVLDSIG 134
Score = 41.2 bits (95), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 28/42 (66%)
Query: 177 KMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADG 218
K V D+M+P P+VVR T L++A ++L E + LPVVD G
Sbjct: 3 KTVADIMSPEPIVVRPDTPLQEAIQILAERRISGLPVVDDVG 44
>gi|416393971|ref|ZP_11686062.1| Inosine-5'-monophosphate dehydrogenase [Crocosphaera watsonii WH
0003]
gi|357263398|gb|EHJ12414.1| Inosine-5'-monophosphate dehydrogenase [Crocosphaera watsonii WH
0003]
Length = 153
Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 80/136 (58%), Gaps = 8/136 (5%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TV MT ++ V P T + EA++I+ EKRI+G PV+D+ KL+G++S+ DL+ +
Sbjct: 4 TVAQVMT--QDPITVTPQTPLSEAVKIIAEKRISGLPVVDEKGKLLGVISETDLMWQE-- 59
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQ--KLLSKTNGKMVGDLMTPAPVVVRETTNLEDAAR 201
+G +DS N + K + K G+ VG++M+ P+ ++ T +L++AA
Sbjct: 60 --TGVEPPPYIMILDSVIYLQNPARHDKEIHKALGQTVGEVMSDKPISIKATQSLKEAAH 117
Query: 202 LLLETKYRRLPVVDAD 217
++ E K RRLPV+D +
Sbjct: 118 IMHEKKIRRLPVLDEN 133
>gi|428206039|ref|YP_007090392.1| putative signal transduction protein [Chroococcidiopsis thermalis
PCC 7203]
gi|428007960|gb|AFY86523.1| putative signal transduction protein with CBS domains
[Chroococcidiopsis thermalis PCC 7203]
Length = 154
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/135 (37%), Positives = 78/135 (57%), Gaps = 4/135 (2%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TV D MT + VV+P T++ +A+++L EKRI+G PV+DD KL+G +S+ DL+ +
Sbjct: 4 TVADVMT--RDPIVVRPETSLHDAIKLLAEKRISGLPVVDDAGKLIGTISETDLMWQE-- 59
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
+G MF + K + ++ L K G+ VG++M+ + V L DAA+L+
Sbjct: 60 TGVTPPAYIMFLDSVIFLKNPAQYERDLHKALGQTVGEVMSQDLITVAPDKPLRDAAQLM 119
Query: 204 LETKYRRLPVVDADG 218
+ K RLPVVD G
Sbjct: 120 HDRKIPRLPVVDPSG 134
Score = 41.2 bits (95), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 27/42 (64%)
Query: 177 KMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADG 218
K V D+MT P+VVR T+L DA +LL E + LPVVD G
Sbjct: 3 KTVADVMTRDPIVVRPETSLHDAIKLLAEKRISGLPVVDDAG 44
>gi|308809011|ref|XP_003081815.1| unnamed protein product [Ostreococcus tauri]
gi|116060282|emb|CAL55618.1| unnamed protein product [Ostreococcus tauri]
Length = 285
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 69/133 (51%), Gaps = 12/133 (9%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRA--DNSMFP 155
V P +V EA+++LVE RI+ PV+D+ ++G+VS+YDL+A + R+ D+ MFP
Sbjct: 81 VGPNASVFEAMKLLVENRISAVPVVDEKGVVLGVVSEYDLMARVGKKETTRSVKDDGMFP 140
Query: 156 ----------EVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLE 205
V W F+ +Q+ + K +G V M P T L +A L+L+
Sbjct: 141 RVGRCDEFNGNVKQMWNQFHNLQERMYKASGTKVLTAMHETPATCTPDTPLVEATELMLD 200
Query: 206 TKYRRLPVVDADG 218
RLPVVD G
Sbjct: 201 KNLARLPVVDERG 213
>gi|428212235|ref|YP_007085379.1| hypothetical protein Oscil6304_1781 [Oscillatoria acuminata PCC
6304]
gi|428000616|gb|AFY81459.1| CBS-domain-containing membrane protein [Oscillatoria acuminata PCC
6304]
Length = 154
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 77/137 (56%), Gaps = 8/137 (5%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TV + MT + VV T++DEA++I+ E+R +G PV+D KL+G++S DL+ +
Sbjct: 4 TVAEIMT--RDPIVVTSQTSLDEAIQIMAERRFSGLPVVDAAGKLIGIISQGDLMWRE-- 59
Query: 144 SGSGRADNSMFPEVDSTWKTFN--EVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAAR 201
SG +DS N + Q+ L K G+ VG++M+ P +R +L +AA
Sbjct: 60 --SGVTPPPYIMVLDSVIYLENPAKYQRDLHKALGQTVGEVMSTNPQTIRPEKSLREAAE 117
Query: 202 LLLETKYRRLPVVDADG 218
L+ E RLPV+D++G
Sbjct: 118 LMHEKGVHRLPVIDSEG 134
Score = 38.9 bits (89), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 29/42 (69%)
Query: 177 KMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADG 218
K V ++MT P+VV T+L++A +++ E ++ LPVVDA G
Sbjct: 3 KTVAEIMTRDPIVVTSQTSLDEAIQIMAERRFSGLPVVDAAG 44
Score = 37.4 bits (85), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 35/55 (63%), Gaps = 2/55 (3%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 138
TVG+ M+T + ++P ++ EA E++ EK + PVID + K +G+++ D++
Sbjct: 94 TVGEVMSTNPQ--TIRPEKSLREAAELMHEKGVHRLPVIDSEGKPIGILTRGDIV 146
>gi|113475881|ref|YP_721942.1| signal transduction protein [Trichodesmium erythraeum IMS101]
gi|110166929|gb|ABG51469.1| putative signal transduction protein with CBS domains
[Trichodesmium erythraeum IMS101]
Length = 153
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 68/123 (55%), Gaps = 6/123 (4%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
VKP T + EA++IL EK I+G PV+DD+ KLVG+VS+ DL+ + SG +
Sbjct: 17 VKPKTPLKEAIKILAEKHISGLPVVDDNGKLVGIVSETDLMWQE----SGVTPPPYIMLL 72
Query: 158 DSTWKTFN--EVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVD 215
DS N +K + K G+ V ++MT P+ R L A+L+ E RLPVVD
Sbjct: 73 DSIIFLENPGRYEKEIHKALGETVEEIMTKNPLTTRSQERLSATAKLMNERSIHRLPVVD 132
Query: 216 ADG 218
+G
Sbjct: 133 ENG 135
>gi|282896431|ref|ZP_06304452.1| Predicted signal transduction protein containing CBS domain
proteins [Raphidiopsis brookii D9]
gi|281198719|gb|EFA73599.1| Predicted signal transduction protein containing CBS domain
proteins [Raphidiopsis brookii D9]
Length = 152
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 78/134 (58%), Gaps = 8/134 (5%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TV MT + V P T + +A++IL EK+I+G PV+DD KLVG++S+ DL+ +
Sbjct: 4 TVAQVMTHNPIM--VNPQTPLKQAIQILAEKQISGLPVVDDMGKLVGIISETDLMWQE-- 59
Query: 144 SGSGRADNSMFPEVDSTWKTFNEV--QKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAAR 201
+G MF +DS N ++ L K G+ VG++M+ P+ + +L+ AA+
Sbjct: 60 TGITPPAYIMF--LDSVIYLQNPATYERDLHKALGQTVGEVMSNNPITISPDQSLKAAAK 117
Query: 202 LLLETKYRRLPVVD 215
++ + K RRLPVVD
Sbjct: 118 IIQDHKVRRLPVVD 131
>gi|428312214|ref|YP_007123191.1| contains C-terminal CBS domains [Microcoleus sp. PCC 7113]
gi|428253826|gb|AFZ19785.1| putative transcriptional regulator, contains C-terminal CBS domains
[Microcoleus sp. PCC 7113]
Length = 155
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/137 (38%), Positives = 77/137 (56%), Gaps = 8/137 (5%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TV D M+ + +VKP T + EA++IL E+RI+G PV+DD LVG++S+ DLL +
Sbjct: 4 TVADVMS--RDPIMVKPQTPIKEAIKILAEQRISGLPVVDDAGSLVGVISETDLLWQE-- 59
Query: 144 SGSGRADNSMFPEVDSTWKTFNEV--QKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAAR 201
+G MF +DS N ++ L K G+ VG++M+ PV V L AA+
Sbjct: 60 TGVEPPIYIMF--LDSVIFLENPARHEQELHKALGQTVGEVMSTNPVTVESDQPLRKAAK 117
Query: 202 LLLETKYRRLPVVDADG 218
L+ E RRL VV+ G
Sbjct: 118 LMQEKSIRRLAVVNDQG 134
>gi|282899529|ref|ZP_06307493.1| Predicted signal transduction protein containing CBS domain
proteins [Cylindrospermopsis raciborskii CS-505]
gi|281195408|gb|EFA70341.1| Predicted signal transduction protein containing CBS domain
proteins [Cylindrospermopsis raciborskii CS-505]
Length = 152
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 79/137 (57%), Gaps = 8/137 (5%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TV MT + V P T + +A++IL EK+++G PV+DD KLVG++S+ DL+ +
Sbjct: 4 TVAQVMTHNPIM--VNPQTPLKQAIQILAEKQVSGLPVVDDMGKLVGIISETDLMWQE-- 59
Query: 144 SGSGRADNSMFPEVDSTWKTFNEV--QKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAAR 201
+G MF +DS N ++ L K G+ VG++M+ P+ + +L+ AA+
Sbjct: 60 TGITPPAYIMF--LDSVIYLQNPATYERDLHKALGQTVGEVMSNNPITISPDQSLKTAAK 117
Query: 202 LLLETKYRRLPVVDADG 218
++ + K RRLPVVD G
Sbjct: 118 IIQDHKVRRLPVVDDAG 134
>gi|307153353|ref|YP_003888737.1| hypothetical protein Cyan7822_3520 [Cyanothece sp. PCC 7822]
gi|306983581|gb|ADN15462.1| CBS domain containing protein [Cyanothece sp. PCC 7822]
Length = 153
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 77/134 (57%), Gaps = 8/134 (5%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TVGD MT + V P T + EA++++ EK+I+G PV+++ LVG++S+ DL+ +
Sbjct: 4 TVGDVMTHNP--YTVTPQTPLSEAIKLMAEKKISGLPVVNEIGNLVGVISETDLMWQE-- 59
Query: 144 SGSGRADNSMFPEVDSTWKTFN--EVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAAR 201
+G +DS N +K + K G+ VG++M+ P+ ++ L +AA+
Sbjct: 60 --TGVEPPPYIMILDSVIYLQNPARYEKEIHKALGQTVGEVMSDKPISIKAYQPLREAAQ 117
Query: 202 LLLETKYRRLPVVD 215
L+ + K RRLPV+D
Sbjct: 118 LMHDKKIRRLPVID 131
>gi|298529782|ref|ZP_07017185.1| CBS domain containing membrane protein [Desulfonatronospira
thiodismutans ASO3-1]
gi|298511218|gb|EFI35121.1| CBS domain containing membrane protein [Desulfonatronospira
thiodismutans ASO3-1]
Length = 157
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 75/136 (55%), Gaps = 13/136 (9%)
Query: 89 MTTKEELHV-----VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS- 142
MTT E+L V P T + EA+ +L+EK I G PV+D + LVG++ DL+A+
Sbjct: 1 MTTAEDLMTSDPIRVHPETDISEAIHLLLEKNINGVPVVDQEDNLVGIICQSDLVAMQKK 60
Query: 143 --ISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAA 200
+ +S+ P + ST K E++K+ + V D MTP PV V++ T LE+ A
Sbjct: 61 IPLPSMFTVLDSILP-LGSTAKMDREIKKIAATR----VEDAMTPEPVAVKKDTPLEELA 115
Query: 201 RLLLETKYRRLPVVDA 216
++++ KY LPV +
Sbjct: 116 EIMVDKKYHTLPVTEG 131
>gi|389690008|ref|ZP_10179025.1| CBS-domain-containing membrane protein [Microvirga sp. WSM3557]
gi|388589526|gb|EIM29814.1| CBS-domain-containing membrane protein [Microvirga sp. WSM3557]
Length = 230
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 76/135 (56%), Gaps = 15/135 (11%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
T D MTT + V+P ++ E ++L + I+G PV+ D+ +L+G+VS+ DL+ +
Sbjct: 3 TAADVMTTA--VITVRPEMSIHEIAKLLCDHHISGVPVVGDNGQLLGIVSEGDLIGHAGL 60
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLL----SKTNGKMVGDLMTPAPVVVRETTNLEDA 199
+G R S W+TF K+L +K++G+ D+MT V V ETT++ D
Sbjct: 61 AGEQR---------RSWWQTFLSGPKVLAQHYAKSHGRTASDVMTKEVVTVLETTSVADT 111
Query: 200 ARLLLETKYRRLPVV 214
AR L + + +RLPV+
Sbjct: 112 ARALEQHRIKRLPVL 126
>gi|434399856|ref|YP_007133860.1| CBS domain containing membrane protein [Stanieria cyanosphaera PCC
7437]
gi|428270953|gb|AFZ36894.1| CBS domain containing membrane protein [Stanieria cyanosphaera PCC
7437]
Length = 153
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 78/134 (58%), Gaps = 8/134 (5%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TV D MT+ V+ P T + EA++IL E +I+G PV+D+ KLVG++S+ DL+ +
Sbjct: 4 TVADVMTSSPI--VITPQTALKEAIKILAEHKISGLPVVDEAGKLVGVLSETDLMWQE-- 59
Query: 144 SGSGRADNSMFPEVDSTWKTFN--EVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAAR 201
+G M +DS N +K + K G+ V ++M+ P+ ++ ++++AA
Sbjct: 60 TGVDPPPYIML--LDSVIYLQNPARYEKEIHKALGQTVAEVMSDRPITIKPHQSVKEAAH 117
Query: 202 LLLETKYRRLPVVD 215
L+ E + RRLPV+D
Sbjct: 118 LMHEKRIRRLPVID 131
Score = 38.9 bits (89), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 28/43 (65%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLAL 140
+KP +V EA ++ EKRI PVID+ +VG+++ D++ +
Sbjct: 106 IKPHQSVKEAAHLMHEKRIRRLPVIDEHNHIVGIITQGDIIRM 148
Score = 38.5 bits (88), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 27/42 (64%)
Query: 177 KMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADG 218
K V D+MT +P+V+ T L++A ++L E K LPVVD G
Sbjct: 3 KTVADVMTSSPIVITPQTALKEAIKILAEHKISGLPVVDEAG 44
>gi|427733825|ref|YP_007053369.1| putative contains C-terminal CBS domains [Rivularia sp. PCC 7116]
gi|427368866|gb|AFY52822.1| putative transcriptional regulator, contains C-terminal CBS domains
[Rivularia sp. PCC 7116]
Length = 154
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 69/120 (57%), Gaps = 6/120 (5%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
VK T + EA++IL EKRI+G PV+DD L+G++S+ DL+ +G + F
Sbjct: 16 VKTDTPLREAIKILAEKRISGLPVVDDAGHLIGIISETDLMW----QQAGVTPPAYFMIF 71
Query: 158 DSTWKTFN--EVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVD 215
DS N E ++ L K G+ VG++M+ P+ + L +AA+++ + K RLPVVD
Sbjct: 72 DSVIYLKNPIEYERELHKALGQTVGEVMSQKPITISPDKPLREAAKIMRDRKIHRLPVVD 131
>gi|300868882|ref|ZP_07113488.1| signal transduction protein [Oscillatoria sp. PCC 6506]
gi|300333099|emb|CBN58680.1| signal transduction protein [Oscillatoria sp. PCC 6506]
Length = 175
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 75/137 (54%), Gaps = 8/137 (5%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TV D MT L +P + EA++IL E+RI+G PV+D++ KLVG++S+ DL+ +
Sbjct: 26 TVADVMTRDPIL--ARPEMPLSEAIKILAERRISGLPVVDENEKLVGVISETDLMWQE-- 81
Query: 144 SGSGRADNSMFPEVDSTWKTFN--EVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAAR 201
G + +DS N ++ L K G+ VG++M+ P+ +L +AAR
Sbjct: 82 --VGVTPPAYIMLLDSVIYLENPGRYERELHKALGQTVGEVMSRDPITTTPDKSLPEAAR 139
Query: 202 LLLETKYRRLPVVDADG 218
L+ E RLPV+D G
Sbjct: 140 LMHERSIHRLPVIDPTG 156
>gi|428773730|ref|YP_007165518.1| hypothetical protein Cyast_1914 [Cyanobacterium stanieri PCC 7202]
gi|428688009|gb|AFZ47869.1| CBS domain containing membrane protein [Cyanobacterium stanieri PCC
7202]
Length = 153
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 76/135 (56%), Gaps = 4/135 (2%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TV D MT V P T + EA+ IL EK+++G PV+D + KLVG++S+ DL+ +
Sbjct: 4 TVADIMTPSP--ITVNPDTPLKEAITILAEKKLSGLPVVDKNNKLVGVISETDLMWQE-- 59
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
+G M + + N +K + K G+ VG++MT + ++ +++ AA++L
Sbjct: 60 TGVEPPPYIMILDSVIYLQNPNRYEKEIHKALGQTVGEVMTNKAITIKSDDSVKRAAQIL 119
Query: 204 LETKYRRLPVVDADG 218
E K RLPVVD +G
Sbjct: 120 HEKKIGRLPVVDGNG 134
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 26/41 (63%)
Query: 177 KMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
K V D+MTP+P+ V T L++A +L E K LPVVD +
Sbjct: 3 KTVADIMTPSPITVNPDTPLKEAITILAEKKLSGLPVVDKN 43
Score = 37.7 bits (86), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 37/62 (59%), Gaps = 5/62 (8%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL---LAL 140
TVG+ MT K +K +V A +IL EK+I PV+D + +VG+V+ D+ +AL
Sbjct: 94 TVGEVMTNKA--ITIKSDDSVKRAAQILHEKKIGRLPVVDGNGNVVGIVTQGDIIQAMAL 151
Query: 141 DS 142
D+
Sbjct: 152 DN 153
>gi|428778151|ref|YP_007169938.1| signal transduction protein [Halothece sp. PCC 7418]
gi|428692430|gb|AFZ45724.1| putative signal transduction protein with CBS domains [Halothece
sp. PCC 7418]
Length = 152
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/137 (37%), Positives = 80/137 (58%), Gaps = 8/137 (5%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TV D MT VV+P T + EA+++LVEK+I+G PV++ D KLVG++S+ DL+ +
Sbjct: 4 TVADVMTANPA--VVQPDTPLKEAIKVLVEKKISGLPVVNKDGKLVGVLSEADLMWQE-- 59
Query: 144 SGSGRADNSMFPEVDSTWKTFN--EVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAAR 201
+G MF +DS N +K L K G+ V ++MT + + L++AA
Sbjct: 60 TGVNPPPYFMF--LDSVIYLENPARYEKELHKALGQTVEEVMTDRAISITGDRPLKEAAH 117
Query: 202 LLLETKYRRLPVVDADG 218
L+ + + RRLPV+D +G
Sbjct: 118 LMHKREVRRLPVLDDEG 134
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 28/42 (66%)
Query: 177 KMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADG 218
K V D+MT P VV+ T L++A ++L+E K LPVV+ DG
Sbjct: 3 KTVADVMTANPAVVQPDTPLKEAIKVLVEKKISGLPVVNKDG 44
>gi|166364594|ref|YP_001656867.1| IMP dehydrogenase [Microcystis aeruginosa NIES-843]
gi|166086967|dbj|BAG01675.1| IMP dehydrogenase [Microcystis aeruginosa NIES-843]
Length = 155
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 76/134 (56%), Gaps = 4/134 (2%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TV D MT V T++ EA++IL EKR +G PV+DD+ +L+G++S+ DL+ +
Sbjct: 4 TVADIMTPNP--ITVTANTSLSEAVKILAEKRFSGLPVVDDNMRLIGVISETDLMWQE-- 59
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
+G M + + + +KLL K G+ VG++MT P+ + L++AA L+
Sbjct: 60 TGVEAPPYIMLLDSVIYLQNPSRHEKLLHKALGQTVGEVMTDKPISITADRPLKEAASLM 119
Query: 204 LETKYRRLPVVDAD 217
+ RRLPV++ +
Sbjct: 120 YDRHVRRLPVIEEE 133
Score = 40.0 bits (92), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 26/39 (66%)
Query: 177 KMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVD 215
K V D+MTP P+ V T+L +A ++L E ++ LPVVD
Sbjct: 3 KTVADIMTPNPITVTANTSLSEAVKILAEKRFSGLPVVD 41
>gi|422302415|ref|ZP_16389778.1| Genome sequencing data, contig C307 [Microcystis aeruginosa PCC
9806]
gi|159028228|emb|CAO88038.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
gi|389788411|emb|CCI16008.1| Genome sequencing data, contig C307 [Microcystis aeruginosa PCC
9806]
Length = 155
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 76/134 (56%), Gaps = 4/134 (2%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TV D MT V T++ EA++IL EKR +G PV+DD+ +L+G++S+ DL+ +
Sbjct: 4 TVADIMTPNP--ITVTANTSLSEAVKILAEKRFSGLPVVDDNMRLIGVISETDLMWQE-- 59
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
+G M + + + +KLL K G+ VG++MT P+ + L++AA L+
Sbjct: 60 TGVEAPPYIMLLDSVIYLQNPSRHEKLLHKALGQTVGEVMTDKPISITADRPLKEAASLM 119
Query: 204 LETKYRRLPVVDAD 217
+ RRLPV++ +
Sbjct: 120 YDRHVRRLPVIEEE 133
Score = 40.0 bits (92), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 26/39 (66%)
Query: 177 KMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVD 215
K V D+MTP P+ V T+L +A ++L E ++ LPVVD
Sbjct: 3 KTVADIMTPNPITVTANTSLSEAVKILAEKRFSGLPVVD 41
>gi|425466366|ref|ZP_18845667.1| IMP dehydrogenase [Microcystis aeruginosa PCC 9809]
gi|389831135|emb|CCI26307.1| IMP dehydrogenase [Microcystis aeruginosa PCC 9809]
Length = 170
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 76/134 (56%), Gaps = 4/134 (2%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TV D MT V T++ EA++IL EKR +G PV+DD+ +L+G++S+ DL+ +
Sbjct: 19 TVADIMTPNP--ITVTANTSLSEAVKILAEKRFSGLPVVDDNIRLIGVISETDLMWQE-- 74
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
+G M + + + +KLL K G+ VG++MT P+ + L++AA L+
Sbjct: 75 TGVEAPPYIMLLDSVIYLQNPSRHEKLLHKALGQTVGEVMTDKPISITADRPLKEAASLM 134
Query: 204 LETKYRRLPVVDAD 217
+ RRLPV++ +
Sbjct: 135 YDRHVRRLPVIEEE 148
Score = 40.4 bits (93), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 30/51 (58%), Gaps = 3/51 (5%)
Query: 168 QKLLSKTNGKM---VGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVD 215
QK L KM V D+MTP P+ V T+L +A ++L E ++ LPVVD
Sbjct: 6 QKALLSQVAKMTKTVADIMTPNPITVTANTSLSEAVKILAEKRFSGLPVVD 56
>gi|440682247|ref|YP_007157042.1| putative signal transduction protein with CBS domains [Anabaena
cylindrica PCC 7122]
gi|428679366|gb|AFZ58132.1| putative signal transduction protein with CBS domains [Anabaena
cylindrica PCC 7122]
Length = 152
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/137 (37%), Positives = 78/137 (56%), Gaps = 8/137 (5%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TV D MT VV T + EA++IL EKRI+G PVI++ KLVG++S+ DL+ +
Sbjct: 4 TVADVMTINP--IVVSLETPLKEAIQILAEKRISGLPVINNAGKLVGIISETDLMWQE-- 59
Query: 144 SGSGRADNSMFPEVDSTWKTFNEV--QKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAAR 201
+G MF +DS N + L K G+ VG++M+ P+ + +L++AA+
Sbjct: 60 TGVTPPAYIMF--LDSVIYLQNPATYDRDLHKALGQTVGEVMSKNPLTITPDKSLKEAAK 117
Query: 202 LLLETKYRRLPVVDADG 218
++ E K RLPV+D G
Sbjct: 118 IIQEHKVHRLPVLDNAG 134
>gi|425444260|ref|ZP_18824315.1| IMP dehydrogenase [Microcystis aeruginosa PCC 9443]
gi|425454352|ref|ZP_18834098.1| IMP dehydrogenase [Microcystis aeruginosa PCC 9807]
gi|389730388|emb|CCI05322.1| IMP dehydrogenase [Microcystis aeruginosa PCC 9443]
gi|389804998|emb|CCI15532.1| IMP dehydrogenase [Microcystis aeruginosa PCC 9807]
Length = 155
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 76/134 (56%), Gaps = 4/134 (2%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TV D MT V T++ EA++IL EKR +G PV+DD+ +L+G++S+ DL+ +
Sbjct: 4 TVADIMTPNP--ITVTANTSLSEAVKILAEKRFSGLPVVDDNIRLIGVISETDLMWQE-- 59
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
+G M + + + +KLL K G+ VG++MT P+ + L++AA L+
Sbjct: 60 TGVEAPPYIMLLDSVIYLQNPSRHEKLLHKALGQTVGEVMTDKPISITADRPLKEAASLM 119
Query: 204 LETKYRRLPVVDAD 217
+ RRLPV++ +
Sbjct: 120 YDRHVRRLPVIEEE 133
Score = 40.0 bits (92), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 26/39 (66%)
Query: 177 KMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVD 215
K V D+MTP P+ V T+L +A ++L E ++ LPVVD
Sbjct: 3 KTVADIMTPNPITVTANTSLSEAVKILAEKRFSGLPVVD 41
>gi|425440870|ref|ZP_18821165.1| IMP dehydrogenase [Microcystis aeruginosa PCC 9717]
gi|389718595|emb|CCH97477.1| IMP dehydrogenase [Microcystis aeruginosa PCC 9717]
Length = 170
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 76/134 (56%), Gaps = 4/134 (2%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TV D MT V T++ EA++IL EKR +G PV+DD+ +L+G++S+ DL+ +
Sbjct: 19 TVADIMTPNP--ITVTANTSLSEAVKILAEKRFSGLPVVDDNIRLIGVISETDLMWQE-- 74
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
+G M + + + +KLL K G+ VG++MT P+ + L++AA L+
Sbjct: 75 TGVEAPPYIMLLDSVIYLQNPSRHEKLLHKALGQTVGEVMTDKPISITADRPLKEAASLM 134
Query: 204 LETKYRRLPVVDAD 217
+ RRLPV++ +
Sbjct: 135 YDRHVRRLPVIEEE 148
Score = 40.0 bits (92), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 26/39 (66%)
Query: 177 KMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVD 215
K V D+MTP P+ V T+L +A ++L E ++ LPVVD
Sbjct: 18 KTVADIMTPNPITVTANTSLSEAVKILAEKRFSGLPVVD 56
>gi|425434032|ref|ZP_18814504.1| Genome sequencing data, contig C307 [Microcystis aeruginosa PCC
9432]
gi|425451953|ref|ZP_18831772.1| Genome sequencing data, contig C307 [Microcystis aeruginosa PCC
7941]
gi|425458721|ref|ZP_18838209.1| Genome sequencing data, contig C307 [Microcystis aeruginosa PCC
9808]
gi|389678231|emb|CCH92908.1| Genome sequencing data, contig C307 [Microcystis aeruginosa PCC
9432]
gi|389766445|emb|CCI07898.1| Genome sequencing data, contig C307 [Microcystis aeruginosa PCC
7941]
gi|389825055|emb|CCI25515.1| Genome sequencing data, contig C307 [Microcystis aeruginosa PCC
9808]
Length = 155
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 76/134 (56%), Gaps = 4/134 (2%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TV D MT V T++ EA++IL EKR +G PV+DD+ +L+G++S+ DL+ +
Sbjct: 4 TVADIMTPNP--ITVTANTSLSEAVKILAEKRFSGLPVVDDNIRLIGVISETDLMWQE-- 59
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
+G M + + + +KLL K G+ VG++MT P+ + L++AA L+
Sbjct: 60 TGVEAPPYIMLLDSVIYLQNPSRHEKLLHKALGQTVGEVMTDKPISITADRPLKEAASLM 119
Query: 204 LETKYRRLPVVDAD 217
+ RRLPV++ +
Sbjct: 120 YDRHVRRLPVIEEE 133
Score = 40.0 bits (92), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 26/39 (66%)
Query: 177 KMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVD 215
K V D+MTP P+ V T+L +A ++L E ++ LPVVD
Sbjct: 3 KTVADIMTPNPITVTANTSLSEAVKILAEKRFSGLPVVD 41
>gi|434406932|ref|YP_007149817.1| putative transcriptional regulator, contains C-terminal CBS domains
[Cylindrospermum stagnale PCC 7417]
gi|428261187|gb|AFZ27137.1| putative transcriptional regulator, contains C-terminal CBS domains
[Cylindrospermum stagnale PCC 7417]
Length = 152
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 78/137 (56%), Gaps = 8/137 (5%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TV D MT + VV+ T + EA++ L EKRI+G PV+DD KLVG++S+ DL+ +
Sbjct: 4 TVADVMTC--DPIVVRRETPLKEAIQTLAEKRISGLPVVDDVEKLVGIISETDLMWQE-- 59
Query: 144 SGSGRADNSMFPEVDSTWKTFNEV--QKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAAR 201
+G MF +DS N ++ L K G+ VG++M+ P+ + L +AA+
Sbjct: 60 TGVTPPAYIMF--LDSVIYLQNPATYERDLHKALGQTVGEVMSKNPITISPDKTLREAAK 117
Query: 202 LLLETKYRRLPVVDADG 218
L+ + RLPV+D+ G
Sbjct: 118 LMHDRSIHRLPVLDSAG 134
>gi|390437672|ref|ZP_10226201.1| IMP dehydrogenase [Microcystis sp. T1-4]
gi|389838870|emb|CCI30323.1| IMP dehydrogenase [Microcystis sp. T1-4]
Length = 155
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 76/134 (56%), Gaps = 9/134 (6%)
Query: 91 TKEELHVVKPT-------TTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TK H++ P T++ EA++IL EKR +G PV+DD+ +L+G++S+ DL+ +
Sbjct: 2 TKTVAHIMTPNPITVTANTSLSEAVKILAEKRFSGLPVVDDNMRLIGVISETDLMWQE-- 59
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
+G M + + + +KLL K G+ VG++MT P+ + L++AA L+
Sbjct: 60 TGVEAPPYIMLLDSVIYLQNPSRHEKLLHKALGQTVGEVMTDKPISITADRPLKEAASLM 119
Query: 204 LETKYRRLPVVDAD 217
+ RRLPV++ +
Sbjct: 120 YDRHVRRLPVIEEE 133
>gi|303284687|ref|XP_003061634.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226456964|gb|EEH54264.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 256
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 73/146 (50%), Gaps = 13/146 (8%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
VG+ MT + + + + V +ALE+LV R +G PV+DDD ++VG++S+YDL+
Sbjct: 90 VVGNVMTPRANVSCARASDNVLDALEVLVSNRHSGVPVLDDDERVVGVISEYDLMVRIGR 149
Query: 144 SGSGRA--DNSMFPE----------VDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVR 191
G ++ D+ MFP+ V W F ++Q + K V + M A
Sbjct: 150 EGKKQSEKDDGMFPKIGRCDEFGGAVKDMWSRFIDLQDRMEKAQVTTVREAMHDAMTCTP 209
Query: 192 ETTNLEDAARLLLETKYRRLPVVDAD 217
ET L DA +L + R+ VVD D
Sbjct: 210 ETL-LVDATDAMLNERRHRICVVDED 234
>gi|425468697|ref|ZP_18847691.1| IMP dehydrogenase [Microcystis aeruginosa PCC 9701]
gi|389884638|emb|CCI35074.1| IMP dehydrogenase [Microcystis aeruginosa PCC 9701]
Length = 170
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 75/134 (55%), Gaps = 4/134 (2%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
T+ D MT V T++ EA++IL EKR +G PV+DD +L+G++S+ DL+ +
Sbjct: 19 TIADIMTPNP--ITVTANTSLSEAVKILAEKRFSGLPVVDDKMRLIGVISETDLMWQE-- 74
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
+G M + + + +KLL K G+ VG++MT P+ + L++AA L+
Sbjct: 75 TGVEAPPYIMLLDSVIYLQNPSRHEKLLHKALGQTVGEVMTDKPISITADRPLKEAASLM 134
Query: 204 LETKYRRLPVVDAD 217
+ RRLPV++ +
Sbjct: 135 YDRHVRRLPVIEEE 148
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 26/39 (66%)
Query: 177 KMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVD 215
K + D+MTP P+ V T+L +A ++L E ++ LPVVD
Sbjct: 18 KTIADIMTPNPITVTANTSLSEAVKILAEKRFSGLPVVD 56
>gi|119511029|ref|ZP_01630149.1| hypothetical protein N9414_09801 [Nodularia spumigena CCY9414]
gi|119464280|gb|EAW45197.1| hypothetical protein N9414_09801 [Nodularia spumigena CCY9414]
Length = 165
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 78/136 (57%), Gaps = 8/136 (5%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TV D MT + V++ T + EA++IL EKRI+G PV+DD KLVG++S+ DL+ +
Sbjct: 17 TVTDIMT--RDPIVLRTETPLKEAIQILAEKRISGIPVVDDVGKLVGIISETDLMWQE-- 72
Query: 144 SGSGRADNSMFPEVDSTWKTFNEV--QKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAAR 201
+G MF +DS N + L K G+ VG++M+ PV + +++AA+
Sbjct: 73 TGVTPPAYIMF--LDSVIYLQNPATYDRELHKALGQTVGEVMSKNPVTIAPEKTVKEAAQ 130
Query: 202 LLLETKYRRLPVVDAD 217
L+ + RLPV+D+
Sbjct: 131 LMHDRSVHRLPVIDSQ 146
Score = 38.5 bits (88), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 31/50 (62%)
Query: 169 KLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADG 218
K +SK K V D+MT P+V+R T L++A ++L E + +PVVD G
Sbjct: 8 KGISKQMSKTVTDIMTRDPIVLRTETPLKEAIQILAEKRISGIPVVDDVG 57
>gi|218441822|ref|YP_002380151.1| hypothetical protein PCC7424_4929 [Cyanothece sp. PCC 7424]
gi|218174550|gb|ACK73283.1| CBS domain containing protein [Cyanothece sp. PCC 7424]
Length = 153
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 76/135 (56%), Gaps = 8/135 (5%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TV D MT + V P T + EA++++ EK I+G PV++D LVG++S+ DL+ +
Sbjct: 4 TVKDVMTPNP--YTVTPQTPLQEAIKLMAEKHISGLPVVNDQGLLVGVISETDLMWQE-- 59
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQ--KLLSKTNGKMVGDLMTPAPVVVRETTNLEDAAR 201
+G +DS N + K + K G+ VG++M+ P+ V+ L +AA+
Sbjct: 60 --TGVETPPYIMILDSVIYLQNPARYDKEIHKALGQTVGEVMSDKPITVKPDQPLREAAQ 117
Query: 202 LLLETKYRRLPVVDA 216
L+ + K RRLPV+++
Sbjct: 118 LMHDKKIRRLPVIES 132
>gi|427709353|ref|YP_007051730.1| putative signal transduction protein [Nostoc sp. PCC 7107]
gi|427361858|gb|AFY44580.1| putative signal transduction protein with CBS domains [Nostoc sp.
PCC 7107]
Length = 164
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 75/135 (55%), Gaps = 4/135 (2%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TV D M+ + VV+ T + EA++IL EKRI+G PV+DD KLVG++S+ DL+ +
Sbjct: 16 TVADVMS--RDPIVVRAETPLKEAIKILAEKRISGLPVVDDVGKLVGIISETDLMWQE-- 71
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
+G MF + K + L K G+ VG++M+ V + L++AA+++
Sbjct: 72 TGVTPPAYIMFLDSVIYLKNPATYDRDLHKALGQTVGEVMSKNAVTISPNKTLKEAAQMM 131
Query: 204 LETKYRRLPVVDADG 218
RLPV+D +G
Sbjct: 132 HNRNVHRLPVLDTEG 146
Score = 38.5 bits (88), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 33/54 (61%), Gaps = 4/54 (7%)
Query: 165 NEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADG 218
N V K +SKT V D+M+ P+VVR T L++A ++L E + LPVVD G
Sbjct: 7 NGVCKQMSKT----VADVMSRDPIVVRAETPLKEAIKILAEKRISGLPVVDDVG 56
>gi|443663854|ref|ZP_21133242.1| CBS domain pair family protein [Microcystis aeruginosa DIANCHI905]
gi|443331736|gb|ELS46380.1| CBS domain pair family protein [Microcystis aeruginosa DIANCHI905]
Length = 147
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 71/120 (59%), Gaps = 2/120 (1%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V T++ EA++IL EKR +G PV+DD+ +L+G++S+ DL+ + +G M +
Sbjct: 8 VTANTSLSEAVKILAEKRFSGLPVVDDNMRLIGVISETDLMWQE--TGVEAPPYIMLLDS 65
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
+ + +KLL K G+ VG++MT P+ + L++AA L+ + RRLPV++ +
Sbjct: 66 VIYLQNPSRHEKLLHKALGQTVGEVMTDKPISITADRPLKEAASLMYDRHVRRLPVIEEE 125
>gi|440752011|ref|ZP_20931214.1| CBS domain pair family protein [Microcystis aeruginosa TAIHU98]
gi|440176504|gb|ELP55777.1| CBS domain pair family protein [Microcystis aeruginosa TAIHU98]
Length = 147
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 71/120 (59%), Gaps = 2/120 (1%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V T++ EA++IL EKR +G PV+DD+ +L+G++S+ DL+ + +G M +
Sbjct: 8 VTANTSLSEAVKILAEKRFSGLPVVDDNIRLIGVISETDLMWQE--TGVEAPPYIMLLDS 65
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
+ + +KLL K G+ VG++MT P+ + L++AA L+ + RRLPV++ +
Sbjct: 66 VIYLQNPSRHEKLLHKALGQTVGEVMTDKPISITADRPLKEAASLMYDRHVRRLPVIEEE 125
>gi|218779499|ref|YP_002430817.1| hypothetical protein Dalk_1651 [Desulfatibacillum alkenivorans
AK-01]
gi|218760883|gb|ACL03349.1| CBS domain containing membrane protein [Desulfatibacillum
alkenivorans AK-01]
Length = 149
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/136 (38%), Positives = 71/136 (52%), Gaps = 12/136 (8%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D MTT E+ +KP T + EA + L+E RI G PV+D+D K+VG++ DL+ +
Sbjct: 4 VSDIMTT--EVISLKPDTDISEAAKQLLENRINGAPVVDEDGKVVGILCQSDLI----VQ 57
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKM----VGDLMTPAPVVVRETTNLEDAA 200
S F +DS + QK K KM V MT PVVV T LED A
Sbjct: 58 QKRFPVPSFFTLLDSVIPLVS--QKHFEKEMEKMAAFKVSQAMTEKPVVVSPDTPLEDVA 115
Query: 201 RLLLETKYRRLPVVDA 216
L+++ K LPVVD+
Sbjct: 116 ALMVDKKLHTLPVVDS 131
>gi|428223589|ref|YP_007107686.1| putative signal transduction protein [Geitlerinema sp. PCC 7407]
gi|427983490|gb|AFY64634.1| putative signal transduction protein with CBS domains [Geitlerinema
sp. PCC 7407]
Length = 153
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 74/134 (55%), Gaps = 8/134 (5%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TV D MT + V+P + +A++IL +KRI+G PV+D KLVG++S+ DL+ +
Sbjct: 4 TVADVMT--RDPITVQPDAPLKDAIQILADKRISGLPVVDQSGKLVGVISETDLMWRE-- 59
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQ--KLLSKTNGKMVGDLMTPAPVVVRETTNLEDAAR 201
SG + +DS N + + L K G+ VG++M+ PV + L +AAR
Sbjct: 60 --SGVTPPAYIMLLDSVIYLENPARYDRDLHKALGQSVGEVMSRDPVTISPDKTLGEAAR 117
Query: 202 LLLETKYRRLPVVD 215
+L E RLPV+D
Sbjct: 118 ILHERSVHRLPVID 131
>gi|254410111|ref|ZP_05023891.1| hypothetical protein MC7420_7869 [Coleofasciculus chthonoplastes
PCC 7420]
gi|196183147|gb|EDX78131.1| hypothetical protein MC7420_7869 [Coleofasciculus chthonoplastes
PCC 7420]
Length = 156
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 68/123 (55%), Gaps = 6/123 (4%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P T + EA++IL E+RI+G V++D KLVG++S+ DLL +G +
Sbjct: 16 VSPQTPIREAMKILAERRISGLLVVNDVGKLVGIISETDLLW----QQTGVEPPVYIVFL 71
Query: 158 DSTWKTFN--EVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVD 215
DS N ++ L K G+ VG++MT APVVV+ L AA+L+ + RRL V D
Sbjct: 72 DSVIYLENPARYEEELHKALGQTVGEVMTHAPVVVKPDQPLRKAAKLMQDKSLRRLAVTD 131
Query: 216 ADG 218
G
Sbjct: 132 NQG 134
>gi|427716841|ref|YP_007064835.1| putative signal transduction protein [Calothrix sp. PCC 7507]
gi|427349277|gb|AFY32001.1| putative signal transduction protein with CBS domains [Calothrix
sp. PCC 7507]
Length = 154
Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 76/135 (56%), Gaps = 4/135 (2%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TV D M+ VV+ T + EA++IL E+RI+G PV+DD +LVG++S+ DL+
Sbjct: 4 TVDDVMSRNPI--VVRTETPLKEAIQILAERRISGLPVVDDAGQLVGIISETDLMWQQ-- 59
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
+G MF + + + ++ L K G+ VG++M+ P+ + + +AA+++
Sbjct: 60 TGVTPPAYIMFLDSVIYLQNPGDYERDLHKALGQTVGEVMSKNPITISPEKTVREAAKIM 119
Query: 204 LETKYRRLPVVDADG 218
+ RLPV+D+ G
Sbjct: 120 HDRHVHRLPVLDSAG 134
>gi|261402855|ref|YP_003247079.1| putative signal transduction protein with CBS domains
[Methanocaldococcus vulcanius M7]
gi|261369848|gb|ACX72597.1| putative signal transduction protein with CBS domains
[Methanocaldococcus vulcanius M7]
Length = 158
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 78/143 (54%), Gaps = 16/143 (11%)
Query: 88 FMTTKEELHVVKPTTTVD-----EALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS 142
FM K+ + KP T D E +++ EKRI+G PV++DD +LVG++S+ D++ +
Sbjct: 4 FMLVKDVMK--KPITVKDNDDLTEVIKLFREKRISGAPVLNDDGELVGIISESDIIK--T 59
Query: 143 ISGSGRADNSMFPE----VDSTWKT---FNEVQKLLSKTNGKMVGDLMTPAPVVVRETTN 195
++ N + P ++ KT E ++ L K V D+MT VV +
Sbjct: 60 LTTHDEDLNLILPSPLDLIELPLKTAIKIEEFKEDLKKALKTKVKDVMTKDVVVAKPDMT 119
Query: 196 LEDAARLLLETKYRRLPVVDADG 218
+ DAA+L++E K +RLPVVD DG
Sbjct: 120 INDAAKLMVEHKIKRLPVVDEDG 142
Score = 41.6 bits (96), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 38/54 (70%), Gaps = 2/54 (3%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 138
V D MT +++ V KP T+++A +++VE +I PV+D+D KL+G+++ D++
Sbjct: 103 VKDVMT--KDVVVAKPDMTINDAAKLMVEHKIKRLPVVDEDGKLIGIITRGDII 154
>gi|327400007|ref|YP_004340846.1| CBS domain-containing protein [Archaeoglobus veneficus SNP6]
gi|327315515|gb|AEA46131.1| CBS domain containing protein [Archaeoglobus veneficus SNP6]
Length = 260
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 66/134 (49%), Gaps = 35/134 (26%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
VGD+MT + + + P TVDEA+E++ + GFPV+DD K++G +S DLL D
Sbjct: 5 VGDYMT--KNVITLSPDNTVDEAIELIQKTGHDGFPVVDDSGKVIGYISSRDLLKKDP-- 60
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
N K +GD+M+ V RE +L DAAR++
Sbjct: 61 ------------------------------NTK-IGDIMSKQLYVAREYMDLRDAARVMF 89
Query: 205 ETKYRRLPVVDADG 218
T + +LPVVD DG
Sbjct: 90 RTGHSKLPVVDDDG 103
>gi|186685839|ref|YP_001869035.1| signal transduction protein [Nostoc punctiforme PCC 73102]
gi|186468291|gb|ACC84092.1| putative signal transduction protein with CBS domains [Nostoc
punctiforme PCC 73102]
Length = 154
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 74/133 (55%), Gaps = 4/133 (3%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TV D M+ + VV+ T + EA++IL E+ I+G PV+DD KLVG++S+ DL+ +
Sbjct: 4 TVADVMS--RDPIVVRAETPLKEAIQILAERHISGLPVVDDVGKLVGIISETDLMWQE-- 59
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
+G MF + K ++ L K G+ VG++M+ P+ + L++AA ++
Sbjct: 60 TGVTPPAYIMFLDSVIYLKNPATYERDLHKALGQTVGEVMSKNPIAISPDKTLKEAATIM 119
Query: 204 LETKYRRLPVVDA 216
+ RLPV+D
Sbjct: 120 HDRSVHRLPVLDG 132
>gi|359457519|ref|ZP_09246082.1| CBS domain-containing protein [Acaryochloris sp. CCMEE 5410]
Length = 163
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 73/142 (51%), Gaps = 18/142 (12%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT + PT ++++ ++++ + RI+G PV+D +VG++S+ DLL +S
Sbjct: 8 VKDFMTPDPI--TISPTDSIEKVIKLIEDHRISGMPVVDASNHVVGIISEGDLLVRES-- 63
Query: 145 GSGRADNSMFPEVDST-------WKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLE 197
M P + T +++ + + + K G +V D+MT P+ + L
Sbjct: 64 -------PMQPPLYMTLLGSVIYFESPKQFHQHMQKALGMLVQDVMTSQPITTKPDIPLT 116
Query: 198 DAARLLLETKYRRLPVVDADGW 219
AA L+L K RLPVVD D +
Sbjct: 117 SAANLMLSKKINRLPVVDNDQY 138
>gi|376001640|ref|ZP_09779503.1| conserved hypothetical protein [Arthrospira sp. PCC 8005]
gi|423062573|ref|ZP_17051363.1| putative signal transduction protein with CBS domain protein
[Arthrospira platensis C1]
gi|375330027|emb|CCE15256.1| conserved hypothetical protein [Arthrospira sp. PCC 8005]
gi|406715908|gb|EKD11060.1| putative signal transduction protein with CBS domain protein
[Arthrospira platensis C1]
Length = 164
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 75/142 (52%), Gaps = 9/142 (6%)
Query: 78 PSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL 137
P + TV D MT V+ P + +A+ +L + RI G PV+D+ KLVG +S+ D+
Sbjct: 5 PDTMAKTVADVMTPNP--LVISPDAPLADAIALLAQNRIGGLPVMDNTGKLVGFISETDI 62
Query: 138 LALDSISGSGRADNSMFPEVDSTWKTFN--EVQKLLSKTNGKMVGDLMTPAPVV-VRETT 194
+ SG + +DS N +K L K G+ VGD+M+ P++ ++
Sbjct: 63 IW----QQSGVTPPAYITILDSVIYLENPSRYEKELHKALGQTVGDVMSNGPMITIKPDC 118
Query: 195 NLEDAARLLLETKYRRLPVVDA 216
+L +AARL+ + + RLPV+D
Sbjct: 119 SLSEAARLMNQKQVHRLPVLDG 140
>gi|354566510|ref|ZP_08985682.1| CBS domain containing membrane protein [Fischerella sp. JSC-11]
gi|353545526|gb|EHC14977.1| CBS domain containing membrane protein [Fischerella sp. JSC-11]
Length = 155
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 69/140 (49%), Gaps = 16/140 (11%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D MTT VKPT +V+ L L E I+G PV+D+ K+VG+VS+ DLL
Sbjct: 8 VKDLMTTDP--VTVKPTDSVETVLRCLEENHISGLPVVDETGKVVGVVSEADLLF----- 60
Query: 145 GSGRADNSMFPEVDS------TWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLED 198
R P S + + + L K+ G +V D+MTP P+ + +
Sbjct: 61 ---RERPVRLPLYLSFLGGIIYLEPLDHFVQQLKKSLGILVQDVMTPDPITIAPDAPISQ 117
Query: 199 AARLLLETKYRRLPVVDADG 218
AA L+LE + RLPVVD G
Sbjct: 118 AADLMLEKRVNRLPVVDETG 137
>gi|158333240|ref|YP_001514412.1| hypothetical protein AM1_0009 [Acaryochloris marina MBIC11017]
gi|158339481|ref|YP_001520658.1| hypothetical protein AM1_6410 [Acaryochloris marina MBIC11017]
gi|158303481|gb|ABW25098.1| CBS domain protein [Acaryochloris marina MBIC11017]
gi|158309722|gb|ABW31339.1| CBS domain protein [Acaryochloris marina MBIC11017]
Length = 163
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 72/142 (50%), Gaps = 18/142 (12%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT + PT +++ ++++ + RI+G PV+D +VG++S+ DLL +S
Sbjct: 8 VKDFMTPDPI--TISPTDSIERVIKLIEDHRISGMPVVDASNHVVGIISEGDLLVRES-- 63
Query: 145 GSGRADNSMFPEVDST-------WKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLE 197
M P + T +++ + + + K G +V D+MT P+ + L
Sbjct: 64 -------PMQPPLYMTLLGSVIYFESPKQFHQHMQKALGMLVQDVMTSQPITTKPDIPLT 116
Query: 198 DAARLLLETKYRRLPVVDADGW 219
AA L+L K RLPVVD D +
Sbjct: 117 SAANLMLSKKINRLPVVDNDQY 138
>gi|428315835|ref|YP_007113717.1| putative signal transduction protein with CBS domains [Oscillatoria
nigro-viridis PCC 7112]
gi|428239515|gb|AFZ05301.1| putative signal transduction protein with CBS domains [Oscillatoria
nigro-viridis PCC 7112]
Length = 166
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 78/137 (56%), Gaps = 8/137 (5%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TV D M+ + L +P ++EA++IL ++RI+G PV+D++ LVG++S+ DL+ +
Sbjct: 17 TVADVMSREPIL--ARPEMPLNEAIKILADRRISGLPVVDENDLLVGVISETDLMWRE-- 72
Query: 144 SGSGRADNSMFPEVDSTWKTFN--EVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAAR 201
SG + +DS N ++ L K G+ VG+ M+ PV + ++ +AA+
Sbjct: 73 --SGVTPPAYIMVLDSVIYLENPSRYERELHKALGQTVGEAMSTDPVTIGPDKSVPEAAK 130
Query: 202 LLLETKYRRLPVVDADG 218
L+ + RLPVVD+ G
Sbjct: 131 LMHDRSIHRLPVVDSAG 147
>gi|427414934|ref|ZP_18905121.1| putative transcriptional regulator, contains C-terminal CBS domains
[Leptolyngbya sp. PCC 7375]
gi|425755587|gb|EKU96452.1| putative transcriptional regulator, contains C-terminal CBS domains
[Leptolyngbya sp. PCC 7375]
Length = 173
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 71/143 (49%), Gaps = 18/143 (12%)
Query: 83 YTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALD- 141
Y V D MT VKP V+ L+ L E I+G PV+DDD K+VG++S+ DLL +
Sbjct: 5 YLVKDLMTLNPV--TVKPFDLVETVLQHLEENHISGLPVVDDDGKVVGVISEADLLFRER 62
Query: 142 ------SISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTN 195
++ G N + E +K + L KT G +V D+MT P+ +
Sbjct: 63 PIKLPLYLNFLG---NFFYLEPPGKFK------QQLRKTLGVLVQDVMTANPITIAPDMP 113
Query: 196 LEDAARLLLETKYRRLPVVDADG 218
+ AA ++E + RLPV+D G
Sbjct: 114 IATAANFMIEKRVNRLPVIDNQG 136
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 40/96 (41%), Gaps = 24/96 (25%)
Query: 57 SALRRSSAVFASGTLTAN--SAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEK 114
LR++ V +TAN + AP + T +FM +EK
Sbjct: 87 QQLRKTLGVLVQDVMTANPITIAPDMPIATAANFM----------------------IEK 124
Query: 115 RITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRAD 150
R+ PVID+ +LVG+++ DLL + AD
Sbjct: 125 RVNRLPVIDNQGQLVGIITREDLLKALKTESAPEAD 160
>gi|209527145|ref|ZP_03275658.1| putative signal transduction protein with CBS domains [Arthrospira
maxima CS-328]
gi|209492394|gb|EDZ92736.1| putative signal transduction protein with CBS domains [Arthrospira
maxima CS-328]
Length = 157
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 73/136 (53%), Gaps = 9/136 (6%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TV D MT V+ P + +A+ +L + RI G PV+D+ KLVG +S+ D++
Sbjct: 4 TVADVMTPNP--LVISPDAPLADAIALLAQNRIGGLPVMDNTGKLVGFISETDIIW---- 57
Query: 144 SGSGRADNSMFPEVDSTWKTFN--EVQKLLSKTNGKMVGDLMTPAPVV-VRETTNLEDAA 200
SG + +DS N +K L K G+ VGD+M+ P++ ++ +L +AA
Sbjct: 58 QQSGVTPPAYITILDSVIYLENPSRYEKELHKALGQTVGDVMSNGPMITIKPDCSLSEAA 117
Query: 201 RLLLETKYRRLPVVDA 216
RL+ + + RLPV+D
Sbjct: 118 RLMNQKQVHRLPVLDG 133
>gi|409991489|ref|ZP_11274746.1| signal transduction protein [Arthrospira platensis str. Paraca]
gi|291567536|dbj|BAI89808.1| hypothetical protein [Arthrospira platensis NIES-39]
gi|409937646|gb|EKN79053.1| signal transduction protein [Arthrospira platensis str. Paraca]
Length = 157
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 73/136 (53%), Gaps = 9/136 (6%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TV D MT V+ P + +A+ +L + RI G PV+D+ KLVG +S+ D++
Sbjct: 4 TVADVMTPNP--LVISPDAPLTDAIALLAQNRIGGLPVMDNTGKLVGFISETDIIW---- 57
Query: 144 SGSGRADNSMFPEVDSTWKTFN--EVQKLLSKTNGKMVGDLMTPAPVV-VRETTNLEDAA 200
SG + +DS N +K L K G+ VGD+M+ P++ ++ +L +AA
Sbjct: 58 QQSGVTPPAYITILDSVIYLENPSRYEKELHKALGQTVGDVMSNGPMITIKPDCSLSEAA 117
Query: 201 RLLLETKYRRLPVVDA 216
RL+ + + RLPV+D
Sbjct: 118 RLMNQKQVHRLPVLDG 133
>gi|334118778|ref|ZP_08492866.1| putative signal transduction protein with CBS domains [Microcoleus
vaginatus FGP-2]
gi|333459008|gb|EGK87623.1| putative signal transduction protein with CBS domains [Microcoleus
vaginatus FGP-2]
Length = 166
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 78/137 (56%), Gaps = 8/137 (5%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TV D M+ + L +P ++EA++IL +RI+G PV+D++ LVG++S+ DL+ +
Sbjct: 17 TVADVMSREPIL--ARPEMPLNEAIKILANRRISGLPVVDENDLLVGVISETDLMWRE-- 72
Query: 144 SGSGRADNSMFPEVDSTWKTFN--EVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAAR 201
+G + +DS N ++ L K G+ VG+ M+ P+ + ++++AA+
Sbjct: 73 --TGVTPPAYIMVLDSVIYLENPSRYERDLHKALGQTVGEAMSKEPITIGPDKSVQEAAK 130
Query: 202 LLLETKYRRLPVVDADG 218
L+ + RLPVVD+ G
Sbjct: 131 LMHDRSIHRLPVVDSAG 147
>gi|148656616|ref|YP_001276821.1| hypothetical protein RoseRS_2494 [Roseiflexus sp. RS-1]
gi|148568726|gb|ABQ90871.1| CBS domain containing protein [Roseiflexus sp. RS-1]
Length = 427
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 80/146 (54%), Gaps = 9/146 (6%)
Query: 72 TANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGL 131
T+ + P TV D MT ++ V+P T V E + +L+++ + PV+D + +++G+
Sbjct: 108 TSRAIGPFPAHLTVADVMT--RQVVSVRPDTPVAEIVALLIDRALRSAPVVDAENRVIGI 165
Query: 132 VSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVR 191
++D DLL G+ ++ E+ S + ++ L T+ DLMTP PV +R
Sbjct: 166 ITDGDLLT----RGATELPLALQREL-SLAERAATIETL--ATHRHTAADLMTPNPVTLR 218
Query: 192 ETTNLEDAARLLLETKYRRLPVVDAD 217
ETT L +AA ++ + +R+PVVDA
Sbjct: 219 ETTPLAEAAAVMADRGLKRIPVVDAQ 244
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 67/141 (47%), Gaps = 6/141 (4%)
Query: 78 PSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL 137
P TVG+ M T ++ V+P T + E L+ L+E V+D + ++VG+++D D+
Sbjct: 275 PDGAPKTVGEIMIT--DVPTVQPDTPLAETLDRLLETDKRRVIVVDGERRVVGIITDGDV 332
Query: 138 LALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLE 197
+ + R + + + L G+ D+MT V + +
Sbjct: 333 MR----RAAKRVRPGALRALAAWFGGGARPPGLEVAAEGRTAADVMTSPVVTLPTNAPIA 388
Query: 198 DAARLLLETKYRRLPVVDADG 218
DA RL++ K +R+P++DADG
Sbjct: 389 DAVRLMMAHKIKRIPIIDADG 409
Score = 43.1 bits (100), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 63/135 (46%), Gaps = 18/135 (13%)
Query: 83 YTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS 142
+T D MT ++ TT + EA ++ ++ + PV+D +LVG+VS DLLA +
Sbjct: 204 HTAADLMTPNPV--TLRETTPLAEAAAVMADRGLKRIPVVDAQQRLVGMVSRSDLLATVA 261
Query: 143 ISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARL 202
G + + + D KT E+ M+ D+ T V+ T L +
Sbjct: 262 -EGLRQRPATPIRQPDGAPKTVGEI----------MITDVPT-----VQPDTPLAETLDR 305
Query: 203 LLETKYRRLPVVDAD 217
LLET RR+ VVD +
Sbjct: 306 LLETDKRRVIVVDGE 320
>gi|258405823|ref|YP_003198565.1| hypothetical protein Dret_1703 [Desulfohalobium retbaense DSM 5692]
gi|257798050|gb|ACV68987.1| CBS domain containing membrane protein [Desulfohalobium retbaense
DSM 5692]
Length = 148
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 69/140 (49%), Gaps = 16/140 (11%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TV D MTT + V+ T + EA + L+E I G PV+DD+ +LVG++ DL+
Sbjct: 3 TVADIMTTN--VITVQKDTPIGEAAKKLLENHINGVPVVDDEGRLVGILCQSDLIT---- 56
Query: 144 SGSGRADNSMFPEVDSTWKTF------NEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLE 197
+ N P V + F +++K + K V MTP P+ V T+L
Sbjct: 57 ----QQKNFPLPTVFTILDGFIPLSSMGQMEKQVQKIAATTVEQAMTPDPITVTADTDLN 112
Query: 198 DAARLLLETKYRRLPVVDAD 217
AA L+++ + LPVVD +
Sbjct: 113 QAASLMVDKNFHTLPVVDGE 132
>gi|15678671|ref|NP_275786.1| hypothetical protein MTH644 [Methanothermobacter thermautotrophicus
str. Delta H]
gi|2621725|gb|AAB85149.1| conserved protein [Methanothermobacter thermautotrophicus str.
Delta H]
Length = 157
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 72/128 (56%), Gaps = 9/128 (7%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFP-- 155
VK T+++ +A +L E RI+G PV+D+D KLVG++S+ D++ L I + N + P
Sbjct: 15 VKRTSSIHDAARVLRENRISGAPVVDEDGKLVGIISEGDIMRL--IEVHSPSLNLIMPSP 72
Query: 156 ----EVDSTWK-TFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRR 210
E+ K ++E+ + + K V ++MTP V V ++ DAA L+ +R
Sbjct: 73 LDLLELPLRMKHEYDEIARGIRKAAVMRVEEIMTPKVVTVPPHASVSDAAELMERHDIKR 132
Query: 211 LPVVDADG 218
LPV+D +G
Sbjct: 133 LPVIDENG 140
>gi|424894152|ref|ZP_18317729.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Rhizobium leguminosarum bv. trifolii
WSM2297]
gi|393183179|gb|EJC83217.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Rhizobium leguminosarum bv. trifolii
WSM2297]
Length = 223
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 71/135 (52%), Gaps = 14/135 (10%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D MTT + V P +V +A +++ +++++G PV+DDD +L+GL+S+ DL+ +S
Sbjct: 3 VKDVMTTT--IVTVSPDNSVRQAAKLMADRQVSGIPVVDDDGRLIGLISEGDLIRRTELS 60
Query: 145 GSG---RADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAAR 201
+A+ + P +E K VGD+MTP PV + E L A
Sbjct: 61 SGAFLLKAEMGLGP---------DERANAFVKRCAWRVGDVMTPNPVTIFEDAPLSRVAG 111
Query: 202 LLLETKYRRLPVVDA 216
L+ E +R+PV+ A
Sbjct: 112 LMQEHGIKRIPVLRA 126
>gi|443243845|ref|YP_007377070.1| putative inosine monophosphate dehydrogenase-related protein, CBS
domain family [Nonlabens dokdonensis DSW-6]
gi|442801244|gb|AGC77049.1| putative inosine monophosphate dehydrogenase-related protein, CBS
domain family [Nonlabens dokdonensis DSW-6]
Length = 153
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 68/139 (48%), Gaps = 25/139 (17%)
Query: 75 SAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSD 134
+AA + V DFMT K L P + E ++IL+++RITG PV+D + +LVG++SD
Sbjct: 12 TAANVPQKFQVKDFMTRK--LITFSPDQGITEVMDILLKQRITGGPVVDANNQLVGIISD 69
Query: 135 YDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETT 194
DL+ + G R N P ++V D M+ P + E
Sbjct: 70 TDLM---HVIGESRYHN--MP------------------VGNRLVSDYMSLQPATIDEEA 106
Query: 195 NLEDAARLLLETKYRRLPV 213
++ DAA L+T +RR PV
Sbjct: 107 DIFDAAARFLKTGHRRFPV 125
>gi|218885382|ref|YP_002434703.1| hypothetical protein DvMF_0278 [Desulfovibrio vulgaris str.
'Miyazaki F']
gi|218756336|gb|ACL07235.1| CBS domain containing membrane protein [Desulfovibrio vulgaris str.
'Miyazaki F']
Length = 150
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 68/123 (55%), Gaps = 10/123 (8%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADN--SMFP 155
V P T + EA I+++++ G PV+D LVG++ DL+A + N ++F
Sbjct: 15 VTPETGIAEAARIMIQRKFNGLPVVDGKGTLVGVICQSDLIA------QHKKLNLPTLFT 68
Query: 156 EVDS--TWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPV 213
+D ++ +++ + + K + VG MTP PV V T +++ A L++++KY LPV
Sbjct: 69 VLDGFIPLRSMSDLDEEMRKISATNVGQAMTPDPVTVGPETPIDEVASLMVDSKYHTLPV 128
Query: 214 VDA 216
VDA
Sbjct: 129 VDA 131
Score = 41.2 bits (95), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 26/38 (68%)
Query: 181 DLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADG 218
D+MT APV V T + +AAR++++ K+ LPVVD G
Sbjct: 6 DIMTAAPVTVTPETGIAEAARIMIQRKFNGLPVVDGKG 43
>gi|22299345|ref|NP_682592.1| hypothetical protein tll1802 [Thermosynechococcus elongatus BP-1]
gi|22295528|dbj|BAC09354.1| CBS domain protein [Thermosynechococcus elongatus BP-1]
Length = 156
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 71/141 (50%), Gaps = 18/141 (12%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D+MT + + EA+ ++ EK++ G PV+DD KLVGLVS+ DL+ ++
Sbjct: 5 VRDYMTPNP--FTISADAPISEAVRLMEEKQVRGLPVVDDKGKLVGLVSEADLIVREA-- 60
Query: 145 GSGRADNSMFPEVDST-------WKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLE 197
+ P + T +++ + L KT G+ V D+MTP P + +
Sbjct: 61 -------PLEPPLYITFLGSIIYFESPESFHQHLKKTLGQQVQDVMTPNPHTINVDAPIS 113
Query: 198 DAARLLLETKYRRLPVVDADG 218
+AARL++ RLPV++ G
Sbjct: 114 EAARLMVNHHISRLPVLNDQG 134
Score = 38.1 bits (87), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 138
V D MT H + + EA ++V I+ PV++D +LVG++S +DLL
Sbjct: 95 VQDVMTPNP--HTINVDAPISEAARLMVNHHISRLPVLNDQGELVGIISRHDLL 146
>gi|359784555|ref|ZP_09287725.1| hypothetical protein MOY_01724 [Halomonas sp. GFAJ-1]
gi|359298179|gb|EHK62397.1| hypothetical protein MOY_01724 [Halomonas sp. GFAJ-1]
Length = 229
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 70/128 (54%), Gaps = 8/128 (6%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGS 146
D MT K + V P V E ++L+E RI+ PV+DD+ +++G+VS+ DL+ + G
Sbjct: 5 DIMTPK--VISVGPDAEVREIAQLLLEHRISAVPVVDDERRVLGIVSEGDLMR--RVKGD 60
Query: 147 GRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLET 206
R S + + + K E K++G+ ++MTP P+ V E T L ARLL +
Sbjct: 61 ERQGRSWWLSLFTGGKDPGE----YVKSHGRKAQEVMTPDPLCVEENTPLHTIARLLEKH 116
Query: 207 KYRRLPVV 214
+R+PVV
Sbjct: 117 HIKRVPVV 124
>gi|116749632|ref|YP_846319.1| hypothetical protein Sfum_2202 [Syntrophobacter fumaroxidans MPOB]
gi|116698696|gb|ABK17884.1| CBS domain containing membrane protein [Syntrophobacter
fumaroxidans MPOB]
Length = 152
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 70/135 (51%), Gaps = 8/135 (5%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D MT ++ V P T + +A ++L++K I G PVIDD LVG++ DL+A
Sbjct: 4 VADIMT--RDVISVSPQTEIVQAAKLLLDKHINGLPVIDDRGNLVGILCQSDLIAQQKRF 61
Query: 145 GSGRADNSM--FPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARL 202
N + F + S + EVQK+ + T VG+ MT PV V T +E+ ARL
Sbjct: 62 PLPSVFNLLDSFIPLTSPSRFEKEVQKISAVT----VGEAMTREPVTVSPDTTIEEVARL 117
Query: 203 LLETKYRRLPVVDAD 217
++ LPVVD +
Sbjct: 118 MVNKNLHTLPVVDGN 132
>gi|374576817|ref|ZP_09649913.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Bradyrhizobium sp. WSM471]
gi|374425138|gb|EHR04671.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Bradyrhizobium sp. WSM471]
Length = 242
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 65/120 (54%), Gaps = 5/120 (4%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P T++ EA I++++ ++G V+D KL+G+VS+ D + I G+GR +
Sbjct: 14 VTPDTSIVEAANIMLKRHVSGLTVVDGAGKLIGVVSEGDFIRRSEI-GTGRKRGRWLRFI 72
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
+ K+ N+ +G+ V ++MTP+PV + E T L + L+ +RLPV+ D
Sbjct: 73 LGSGKSAND----FIHEHGRKVSEVMTPSPVTISEDTALAEIVDLMERNNVKRLPVIHGD 128
>gi|347730925|ref|ZP_08864035.1| CBS domain pair family protein [Desulfovibrio sp. A2]
gi|347520431|gb|EGY27566.1| CBS domain pair family protein [Desulfovibrio sp. A2]
Length = 150
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 67/123 (54%), Gaps = 10/123 (8%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADN--SMFP 155
V P T + EA I+++++ G PV+D LVG++ DL+A + N ++F
Sbjct: 15 VTPETGIAEAARIMIQRKFNGLPVVDAKGALVGVICQSDLIA------QHKKLNLPTLFT 68
Query: 156 EVDS--TWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPV 213
+D ++ +++ + + K + VG MTP PV V T +++ A L++++KY LPV
Sbjct: 69 VLDGFIPLRSMSDLDEEMRKISATNVGQAMTPDPVTVGPETPIDEVASLMVDSKYHTLPV 128
Query: 214 VDA 216
VD
Sbjct: 129 VDG 131
Score = 42.7 bits (99), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 27/38 (71%)
Query: 181 DLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADG 218
D+MT APV V T + +AAR++++ K+ LPVVDA G
Sbjct: 6 DIMTAAPVTVTPETGIAEAARIMIQRKFNGLPVVDAKG 43
>gi|411118891|ref|ZP_11391271.1| putative transcriptional regulator [Oscillatoriales cyanobacterium
JSC-12]
gi|410710754|gb|EKQ68261.1| putative transcriptional regulator [Oscillatoriales cyanobacterium
JSC-12]
Length = 156
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 74/137 (54%), Gaps = 9/137 (6%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TV D MT + +P T +DE ++ L KRI+G PV+++D KLVG++S+ DL+ +
Sbjct: 4 TVADVMT--RDPITARPDTPLDEVIKTLAAKRISGLPVVNEDGKLVGIISETDLMWRE-- 59
Query: 144 SGSGRADNSMFPEVDSTWKTFN--EVQKLLSKTNGKMVGDLMTPAPVV-VRETTNLEDAA 200
SG +DS N + ++ L K G V D+MT VV + +L DAA
Sbjct: 60 --SGVTPPPYIMLLDSVIYLENPAKYERELHKALGSTVKDVMTDRHVVTIAPDKSLRDAA 117
Query: 201 RLLLETKYRRLPVVDAD 217
+L+ E RLPV+D +
Sbjct: 118 QLMHERGVHRLPVLDKE 134
>gi|386828147|ref|ZP_10115254.1| CBS-domain-containing membrane protein [Beggiatoa alba B18LD]
gi|386429031|gb|EIJ42859.1| CBS-domain-containing membrane protein [Beggiatoa alba B18LD]
Length = 142
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 73/132 (55%), Gaps = 19/132 (14%)
Query: 82 VYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALD 141
+ TV + M+ + L+ +KPT TV +A +++++K I P++D+ +GL++ +D+LAL
Sbjct: 1 MITVKELMSHR--LYTLKPTDTVHQARQLMLDKHIRHIPIVDNHGTFLGLITKHDILAL- 57
Query: 142 SISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAAR 201
S S AD E Q+ + +G + +M VV +E+TNL +AAR
Sbjct: 58 --SVSELAD--------------IEPQERIEIESGIPLSQVMLTEVVVAQESTNLLEAAR 101
Query: 202 LLLETKYRRLPV 213
+LE K+ LPV
Sbjct: 102 FILEQKHGCLPV 113
>gi|410460188|ref|ZP_11313871.1| CBS domain-containing membrane protein [Bacillus azotoformans LMG
9581]
gi|409927418|gb|EKN64554.1| CBS domain-containing membrane protein [Bacillus azotoformans LMG
9581]
Length = 181
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 79/157 (50%), Gaps = 33/157 (21%)
Query: 76 AAPSSG---VYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLV 132
A P+S + V DFM TK + VKP++T+ E L+IL RI G PV+DD LVG+V
Sbjct: 23 AIPTSKEGIIMKVRDFMITK--VFTVKPSSTIKELLDILNSNRIGGVPVVDDKGHLVGMV 80
Query: 133 SDYDLL-----------ALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGD 181
SD D+L L I G +N + ++D++ V+++++K N
Sbjct: 81 SDGDVLRYLSPKRLGFAGLIYIIEDGELENVLHEKLDTS------VKEIMTKRN------ 128
Query: 182 LMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADG 218
+++ +P E RLL Y++LPVV+ G
Sbjct: 129 ILSVSP-----EDEFEMTMRLLSIHNYKKLPVVNRAG 160
>gi|27379749|ref|NP_771278.1| hypothetical protein blr4638 [Bradyrhizobium japonicum USDA 110]
gi|27352902|dbj|BAC49903.1| blr4638 [Bradyrhizobium japonicum USDA 110]
Length = 240
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 61/121 (50%), Gaps = 13/121 (10%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P TT++EA +I++ I+G PVIDD LVG+VS+ D L I G+GR
Sbjct: 14 VTPHTTIEEAAKIMLRMHISGLPVIDDAGNLVGIVSESDFLRRSEI-GTGRK-------- 64
Query: 158 DSTWKTF----NEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPV 213
+ W F +G+ V D+MT V RE T+L D L+ + +R+PV
Sbjct: 65 HAAWLKFFMGPRRAAAEFVHESGRKVEDVMTRQVVSAREETSLVDVVDLMEKHDIKRVPV 124
Query: 214 V 214
+
Sbjct: 125 M 125
>gi|186475859|ref|YP_001857329.1| signal-transduction protein [Burkholderia phymatum STM815]
gi|184192318|gb|ACC70283.1| putative signal-transduction protein with CBS domains [Burkholderia
phymatum STM815]
Length = 230
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 65/132 (49%), Gaps = 14/132 (10%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGS 146
D MTT + P TTV EA L EK I+G PV+DD +LVG+V++ DLL I G+
Sbjct: 5 DVMTTS--VVFAHPDTTVQEAARALAEKHISGMPVVDDKGELVGMVTEGDLLHRAEI-GT 61
Query: 147 GRADNSMFPEVDSTWKTF----NEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARL 202
G + W F E+ K + V DLMT + V E T + D A L
Sbjct: 62 GVNKRAW-------WLDFLASTRELASEYIKEHSHKVSDLMTTDVITVTEDTPVSDIAEL 114
Query: 203 LLETKYRRLPVV 214
L + +R+PVV
Sbjct: 115 LERHRIKRVPVV 126
>gi|56752279|ref|YP_172980.1| hypothetical protein syc2270_d [Synechococcus elongatus PCC 6301]
gi|81300633|ref|YP_400841.1| hypothetical protein Synpcc7942_1824 [Synechococcus elongatus PCC
7942]
gi|24251259|gb|AAN46179.1| unknown protein [Synechococcus elongatus PCC 7942]
gi|56687238|dbj|BAD80460.1| hypothetical protein [Synechococcus elongatus PCC 6301]
gi|81169514|gb|ABB57854.1| CBS [Synechococcus elongatus PCC 7942]
Length = 154
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 73/137 (53%), Gaps = 9/137 (6%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TV DFMT + VKP T + EA+ IL +K I+G PV+D+ +LVG++S+ DL+ +
Sbjct: 4 TVADFMT--RDPISVKPQTPLTEAIRILADKHISGLPVVDEAGQLVGVLSETDLMWRE-- 59
Query: 144 SGSGRADNSMFPEVDSTWKTFNE---VQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAA 200
SG + +V ++ ++ L K G+ V ++MT P+ + L +AA
Sbjct: 60 --SGVPTPPPYIQVLDSFIYLENPARYEQELHKALGETVAEVMTAQPLTIAADRPLPEAA 117
Query: 201 RLLLETKYRRLPVVDAD 217
RL + K RL V+ D
Sbjct: 118 RLFNDRKVHRLFVLSGD 134
>gi|332711630|ref|ZP_08431561.1| putative signal-transduction protein [Moorea producens 3L]
gi|332349608|gb|EGJ29217.1| putative signal-transduction protein [Moorea producens 3L]
Length = 155
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 73/134 (54%), Gaps = 8/134 (5%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TV + MT + VV+P T + E ++I+ E+ I+G PV+++ KLVG++S+ DLL +
Sbjct: 4 TVAEVMT--RDPIVVQPETPIKEVIKIIAEQSISGLPVVNEAGKLVGVISETDLLWQE-- 59
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQ--KLLSKTNGKMVGDLMTPAPVVVRETTNLEDAAR 201
+G MF +DS N + + L K G+ G++MT P+ ++ L AA+
Sbjct: 60 TGVEPPVYIMF--LDSVIYLENPARYDQELHKALGQTAGEVMTGHPMSIKPDQPLRKAAK 117
Query: 202 LLLETKYRRLPVVD 215
L+ E LPV D
Sbjct: 118 LMQEKSIHHLPVTD 131
>gi|374301056|ref|YP_005052695.1| hypothetical protein [Desulfovibrio africanus str. Walvis Bay]
gi|332553992|gb|EGJ51036.1| CBS domain containing membrane protein [Desulfovibrio africanus
str. Walvis Bay]
Length = 152
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 76/138 (55%), Gaps = 9/138 (6%)
Query: 82 VYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALD 141
+++ D M+T ++ P T + A +L+EKRI G PV++ D +LVG++S DL+A
Sbjct: 1 MFSAKDIMST--QVITFTPDTEIVAAARVLLEKRINGAPVVEGD-RLVGILSQTDLVA-- 55
Query: 142 SISGSGRADNSMFPEVDS--TWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDA 199
++F +D +++ ++ + + K + VG+ MT PV VR T + D
Sbjct: 56 --QQKTLTMPTLFTLLDGFIPLRSYEKLDEDMRKISAMTVGEAMTVKPVTVRPDTTITDI 113
Query: 200 ARLLLETKYRRLPVVDAD 217
A++++E K LPVV+ D
Sbjct: 114 AQIMVEKKIHTLPVVEGD 131
>gi|359791626|ref|ZP_09294471.1| putative CBS domain protein [Mesorhizobium alhagi CCNWXJ12-2]
gi|359252271|gb|EHK55537.1| putative CBS domain protein [Mesorhizobium alhagi CCNWXJ12-2]
Length = 220
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 62/117 (52%), Gaps = 6/117 (5%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P +V A I+++ RI+G PVIDDD ++VG+V++ DL+ + ++ P V
Sbjct: 14 VSPDHSVRHAARIMLDHRISGLPVIDDDGRVVGIVTEGDLMRRSELGA-----QALAP-V 67
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVV 214
D + T K++ V D+MT PV V E T L A L+ E +R+PV+
Sbjct: 68 DRQFSTEENNAGAYVKSHSWKVADVMTEDPVKVEEETPLPRIAALMAERGIKRVPVM 124
>gi|352102837|ref|ZP_08959407.1| hypothetical protein HAL1_08912 [Halomonas sp. HAL1]
gi|350599688|gb|EHA15772.1| hypothetical protein HAL1_08912 [Halomonas sp. HAL1]
Length = 229
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 69/132 (52%), Gaps = 16/132 (12%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA-LDSISG 145
D MT K + V P V E +L+ RI+ PV+D + +++G+VS+ DL+ ++ G
Sbjct: 5 DIMTPK--VVSVGPDAEVSEIARLLLHHRISAVPVVDAEHRVIGIVSEGDLMRRVEDDDG 62
Query: 146 SGRADNSMFPEVDSTWKTFNEVQKLLS---KTNGKMVGDLMTPAPVVVRETTNLEDAARL 202
GR S W T K S K++G+ ++MTP P+ V E T L ARL
Sbjct: 63 HGR----------SWWLTLFAGGKSASDYVKSHGRKAHEVMTPNPMTVEENTPLHTIARL 112
Query: 203 LLETKYRRLPVV 214
L + + +R+PVV
Sbjct: 113 LEKHRIKRVPVV 124
>gi|282857772|ref|ZP_06266981.1| CBS domain protein [Pyramidobacter piscolens W5455]
gi|282584442|gb|EFB89801.1| CBS domain protein [Pyramidobacter piscolens W5455]
Length = 155
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 67/127 (52%), Gaps = 9/127 (7%)
Query: 92 KEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL--ALDSISGSGRA 149
K +L V TV++A+ +L ++G PV+DD W+LVG +S+ D+L L S
Sbjct: 13 KRDLTAVMAEDTVEDAMHVLRSHSLSGVPVVDDQWRLVGFLSESDILRSVLPSYLEILAQ 72
Query: 150 DNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYR 209
D+ ++ E + K F++V+ +V D M V+ TN+ + A L+L K +
Sbjct: 73 DSFLYGEHELLVKKFSQVR-------AGVVRDYMQACCQSVQPETNIMNVADLMLRLKVK 125
Query: 210 RLPVVDA 216
RLPVV+
Sbjct: 126 RLPVVEG 132
>gi|225174422|ref|ZP_03728421.1| CBS domain containing membrane protein [Dethiobacter alkaliphilus
AHT 1]
gi|225170207|gb|EEG79002.1| CBS domain containing membrane protein [Dethiobacter alkaliphilus
AHT 1]
Length = 148
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 64/119 (53%), Gaps = 8/119 (6%)
Query: 103 TVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWK 162
T+++ ILVE RI+G PV+D + ++VG+V++ DL+ D + F E+
Sbjct: 19 TINDVAAILVEHRISGVPVVDKEQRVVGMVTEGDLIHQDK-----KLHTPAFLEILGGVI 73
Query: 163 TFNEVQKL---LSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADG 218
Q++ L K V ++MT V+E T +ED A +++E + R+PVVDA G
Sbjct: 74 YLENPQRVAKDLEKMTATKVVEIMTRKVFTVKEDTPIEDIATMMVERQVNRVPVVDAAG 132
>gi|187920240|ref|YP_001889271.1| hypothetical protein Bphyt_5546 [Burkholderia phytofirmans PsJN]
gi|187718678|gb|ACD19901.1| CBS domain containing membrane protein [Burkholderia phytofirmans
PsJN]
Length = 230
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 64/119 (53%), Gaps = 4/119 (3%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P +TV E +I V+ I+G PV+D D L+G++S+ DLL + I R+ S
Sbjct: 14 VHPDSTVREVAKIFVDNGISGAPVLDADGHLIGMISEGDLLRRNEIGTDERSRTSWL--- 70
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDA 216
D W +E + + KT+ V D+M+ V V+ T L + A +L + +R+PV +A
Sbjct: 71 DHLWSASHEARDYI-KTHATKVRDVMSTEVVTVQPGTPLGEVASILETRRIKRVPVTEA 128
>gi|218678132|ref|ZP_03526029.1| signal-transduction protein [Rhizobium etli CIAT 894]
Length = 201
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 69/133 (51%), Gaps = 14/133 (10%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D MTT + + P +V A +++ +++++G PV+DDD +L+G++S+ DL+ +S
Sbjct: 3 VKDVMTTT--VVTLSPDNSVRHAAKLMADQQVSGVPVVDDDGRLLGVISEGDLIRRTELS 60
Query: 145 GSG---RADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAAR 201
+AD + P +E K VGD+MTP P+ + E L A
Sbjct: 61 SGAFVLKADMELGP---------DERANAFVKRCAWRVGDVMTPDPLTIDEDAALSHVAE 111
Query: 202 LLLETKYRRLPVV 214
L+ E +R+PV+
Sbjct: 112 LMQERGIKRIPVL 124
>gi|402848240|ref|ZP_10896505.1| putative CBS domain protein [Rhodovulum sp. PH10]
gi|402501566|gb|EJW13213.1| putative CBS domain protein [Rhodovulum sp. PH10]
Length = 180
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 72/133 (54%), Gaps = 14/133 (10%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFM+ + P + EA ++++E R++G PV+D +LVG+VS++DLL S +
Sbjct: 3 VRDFMSHPAV--AIAPDRPIAEAAQLMLEHRVSGLPVVDATGRLVGIVSEHDLLRRRS-N 59
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLS---KTNGKMVGDLMTPAPVVVRETTNLEDAAR 201
G+ R + + + E Q L + + VGD+MT V V + T+LE+A R
Sbjct: 60 GATRRPHWL--------QLMTEGQALAQEPERFHALTVGDVMTTEVVAVSDDTSLEEAGR 111
Query: 202 LLLETKYRRLPVV 214
L+ +RLPV+
Sbjct: 112 LIEVHGIKRLPVI 124
>gi|220925988|ref|YP_002501290.1| hypothetical protein Mnod_6174 [Methylobacterium nodulans ORS 2060]
gi|219950595|gb|ACL60987.1| CBS domain containing membrane protein [Methylobacterium nodulans
ORS 2060]
Length = 246
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 71/138 (51%), Gaps = 25/138 (18%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGS 146
D MT EE+ V+ ++ A+ +++EKRI+G PV+D D ++G+V++ DLLA
Sbjct: 5 DIMT--EEVTGVRADLPLELAVALMLEKRISGLPVLDPDGAVIGIVTEGDLLA------- 55
Query: 147 GRADNSMFPEVDSTWKTFNEVQKLLS---------KTNGKMVGDLMTPAPVVVRETTNLE 197
PE+ + N VQ L+S + G+ VGD+MT V T L+
Sbjct: 56 -------RPELGTARPKPNWVQYLISPGRLAEAYARERGRQVGDVMTKEVVTASPDTPLD 108
Query: 198 DAARLLLETKYRRLPVVD 215
+ L+ + +R+PVVD
Sbjct: 109 EIVDLMARRRIKRVPVVD 126
>gi|152993377|ref|YP_001359098.1| inosine 5'-monophosphate dehydrogenase [Sulfurovum sp. NBC37-1]
gi|151425238|dbj|BAF72741.1| inosine-5'-monophosphate dehydrogenase [Sulfurovum sp. NBC37-1]
Length = 481
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 62/122 (50%), Gaps = 33/122 (27%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
+ P TV EA ++ E RI+G PV+D D KL+G++++ D+ +
Sbjct: 99 ISPDATVGEADALMGEYRISGVPVVDADKKLIGIITNRDMRFI----------------T 142
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVV-VRETTNLEDAARLLLETKYRRLPVVDA 216
D + K V D MTPAP+V ++ T LE+AA++L + K +LP+VD
Sbjct: 143 DMSLK----------------VADTMTPAPLVTAKKGTTLEEAAKVLQKHKIEKLPIVDD 186
Query: 217 DG 218
DG
Sbjct: 187 DG 188
Score = 37.7 bits (86), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 27/39 (69%)
Query: 99 KPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL 137
K TT++EA ++L + +I P++DDD KL GL++ D+
Sbjct: 161 KKGTTLEEAAKVLQKHKIEKLPIVDDDGKLNGLITIKDI 199
>gi|217076999|ref|YP_002334715.1| hypothetical protein THA_915 [Thermosipho africanus TCF52B]
gi|419759571|ref|ZP_14285865.1| hypothetical protein H17ap60334_01401 [Thermosipho africanus
H17ap60334]
gi|217036852|gb|ACJ75374.1| CBS domain containing membrane protein [Thermosipho africanus
TCF52B]
gi|407515391|gb|EKF50149.1| hypothetical protein H17ap60334_01401 [Thermosipho africanus
H17ap60334]
Length = 147
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 66/117 (56%), Gaps = 10/117 (8%)
Query: 103 TVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL--ALDSISGSGRADNSMFPEVDST 160
+V L+IL +++TG PVID+D+K+VG +S+ D++ AL S S S P+
Sbjct: 19 SVSRVLKILSRQQVTGVPVIDEDYKVVGFISENDIIRAALPS-YFSLLQTASFIPD---- 73
Query: 161 WKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
N+ + L K + + V ++MT + ++E+T L AA L++ + LPVVD D
Sbjct: 74 ---LNQFVRNLKKISNRAVSEIMTKPAITIKESTPLLHAADLMIRHSLKILPVVDED 127
>gi|383770464|ref|YP_005449527.1| hypothetical protein S23_22020 [Bradyrhizobium sp. S23321]
gi|381358585|dbj|BAL75415.1| hypothetical protein S23_22020 [Bradyrhizobium sp. S23321]
Length = 242
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 63/120 (52%), Gaps = 5/120 (4%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P T++ EA I++++ I+G V+DD KLVG+VS+ D + I G+GR +
Sbjct: 14 VTPDTSIVEAANIMLKRHISGLTVVDDSGKLVGVVSEGDFIRRSEI-GTGRKRGRWLRFI 72
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
K+ ++ +G+ V ++MT PV + E T L + L+ +RLPVV D
Sbjct: 73 LGPGKSASD----FVHEHGRKVSEVMTAKPVTITEDTALAEIVDLMERNNVKRLPVVRGD 128
>gi|163754304|ref|ZP_02161426.1| CBS domain protein, putative [Kordia algicida OT-1]
gi|161325245|gb|EDP96572.1| CBS domain protein, putative [Kordia algicida OT-1]
Length = 156
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 74/145 (51%), Gaps = 26/145 (17%)
Query: 71 LTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVG 130
+ ANS + + V D+MT L KP TV+E ++ L++ +I+G PV++D +L+G
Sbjct: 12 VQANSTNKAEA-FKVSDYMT--RNLITFKPEQTVEEVIQKLIQHKISGGPVVNDQNELIG 68
Query: 131 LVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVV 190
++S+ D + IS S R N F N+++ ++K + GDL
Sbjct: 69 IISEGD--CIKQISDS-RYYNMPFEH--------NKIEAHMAKNVETIDGDL-------- 109
Query: 191 RETTNLEDAARLLLETKYRRLPVVD 215
N+ DAA +ETK RR P+V+
Sbjct: 110 ----NIFDAANKFIETKRRRFPIVE 130
>gi|337284850|ref|YP_004624324.1| inosine 5'-monophosphate dehydrogenase [Pyrococcus yayanosii CH1]
gi|334900784|gb|AEH25052.1| inosine 5'-monophosphate dehydrogenase [Pyrococcus yayanosii CH1]
Length = 486
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 62/126 (49%), Gaps = 34/126 (26%)
Query: 93 EELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNS 152
E++ +KP TV+ AL ++ + I G PV+DDD +VG+VS D+ + D
Sbjct: 101 EDIITIKPEETVEYALFLMEKNDIDGLPVVDDDGMVVGIVSKKDIASRD----------- 149
Query: 153 MFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLP 212
GK+V +LMT + V E+ +E+A R+++E + RLP
Sbjct: 150 -----------------------GKLVKELMTRDVITVPESVEVEEALRIMVENRIDRLP 186
Query: 213 VVDADG 218
VVD +G
Sbjct: 187 VVDREG 192
Score = 43.9 bits (102), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 33/55 (60%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNS 152
V + V+EAL I+VE RI PV+D + KLVGL++ DL+A + R +N
Sbjct: 164 VPESVEVEEALRIMVENRIDRLPVVDREGKLVGLITMSDLVARKKYKNAVRNENG 218
>gi|268324813|emb|CBH38401.1| conserved hypothetical protein containing CBS domain pair
[uncultured archaeon]
Length = 160
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 74/152 (48%), Gaps = 29/152 (19%)
Query: 82 VYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALD 141
V V + MTT ++ KP+ V + E RI+G PVIDD K++G++S+ D++ L
Sbjct: 6 VVKVRELMTT--DVIAFKPSDKVHQVAETFRSNRISGAPVIDDQRKVIGVISEADIMKLT 63
Query: 142 SISGSGRADNSMFPEVD---------------STWKTFNEVQKLLSKTNGKMVGDLMTPA 186
+ FP++D K +E++ L + V D+MT
Sbjct: 64 A--------TVPFPDIDPLNPFPVFSLTAYRKKVEKIPDEIETLFEGS----VKDVMTKD 111
Query: 187 PVVVRETTNLEDAARLLLETKYRRLPVVDADG 218
PV + ++ DAARL+ + + R+PVVD +G
Sbjct: 112 PVTISPDDSILDAARLMHKGDFNRIPVVDDEG 143
>gi|427722542|ref|YP_007069819.1| putative signal transduction protein [Leptolyngbya sp. PCC 7376]
gi|427354262|gb|AFY36985.1| putative signal transduction protein with CBS domains [Leptolyngbya
sp. PCC 7376]
Length = 155
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 74/136 (54%), Gaps = 8/136 (5%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TV + MT VVK T + EA+++LV+++++G PV+D + KLVG++S+ DL +
Sbjct: 5 TVAEIMTADPV--VVKKDTPLAEAIQLLVDRKVSGLPVVDQEMKLVGIISEGDL----TW 58
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQ--KLLSKTNGKMVGDLMTPAPVVVRETTNLEDAAR 201
+G +DS N + K + K G+ VG++M+ V + + +AA
Sbjct: 59 QETGVDTPPYIMLLDSVIYLQNPAKHDKEIHKALGQTVGEVMSDKVVTIAPNKMVREAAH 118
Query: 202 LLLETKYRRLPVVDAD 217
L+ E K RLPV+ +D
Sbjct: 119 LMHEKKVGRLPVLASD 134
Score = 37.4 bits (85), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 28/41 (68%)
Query: 177 KMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
K V ++MT PVVV++ T L +A +LL++ K LPVVD +
Sbjct: 4 KTVAEIMTADPVVVKKDTPLAEAIQLLVDRKVSGLPVVDQE 44
>gi|452851187|ref|YP_007492871.1| CBS domain containing membrane protein [Desulfovibrio piezophilus]
gi|451894841|emb|CCH47720.1| CBS domain containing membrane protein [Desulfovibrio piezophilus]
Length = 149
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 68/133 (51%), Gaps = 9/133 (6%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGS 146
D MTT E + P T V A L+E +I G PVID+ ++VG++ DL+A
Sbjct: 6 DIMTT--ECITLTPDTDVATAARTLIENKINGAPVIDN-GQVVGVLCQADLVA----QQK 58
Query: 147 GRADNSMFPEVDSTW--KTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
S F +D + + E+++ + K + VG+ MTPAP+ + T +ED A ++
Sbjct: 59 KVTLPSFFTLLDGVFPLSSHEELEREMKKISALTVGEAMTPAPIFISPETKMEDIATMMA 118
Query: 205 ETKYRRLPVVDAD 217
K LPV+D D
Sbjct: 119 NEKLYTLPVLDDD 131
>gi|94266307|ref|ZP_01290010.1| CBS [delta proteobacterium MLMS-1]
gi|93453098|gb|EAT03574.1| CBS [delta proteobacterium MLMS-1]
Length = 149
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 65/127 (51%), Gaps = 15/127 (11%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
VKP V+E +L EKRI+G PV+DDD KLVG+ ++ DL+ +A P
Sbjct: 15 VKPEMPVEELAALLWEKRISGVPVVDDDGKLVGVATESDLI--------DQAKKFHIPTA 66
Query: 158 DSTWKTF------NEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRL 211
+ + +V+K +SK G V D+ T PV V T L++ A ++ E L
Sbjct: 67 ITILEAVIFLDRGKKVEKEVSKMAGSRVRDICTSEPVTVGPETPLDELATIMAEKHLHTL 126
Query: 212 PVVDADG 218
PV++ DG
Sbjct: 127 PVLE-DG 132
>gi|94270649|ref|ZP_01291791.1| CBS [delta proteobacterium MLMS-1]
gi|93450722|gb|EAT01796.1| CBS [delta proteobacterium MLMS-1]
Length = 149
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 65/127 (51%), Gaps = 15/127 (11%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
VKP V+E +L EKRI+G PV+DDD KLVG+ ++ DL+ +A P
Sbjct: 15 VKPEMPVEELAALLWEKRISGVPVVDDDGKLVGVATESDLI--------DQAKKFHIPTA 66
Query: 158 DSTWKTF------NEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRL 211
+ + +V+K +SK G V D+ T PV V T L++ A ++ E L
Sbjct: 67 ITILEAVIFLDRGKKVEKEVSKMAGSRVRDICTSEPVTVGPETPLDELATIMAEKHLHTL 126
Query: 212 PVVDADG 218
PV++ DG
Sbjct: 127 PVLE-DG 132
>gi|116249833|ref|YP_765671.1| hypothetical protein RL0067 [Rhizobium leguminosarum bv. viciae
3841]
gi|115254481|emb|CAK05555.1| putative CBS domain protein [Rhizobium leguminosarum bv. viciae
3841]
Length = 222
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 67/130 (51%), Gaps = 8/130 (6%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D M TK + V P +V A EI++ ++G PVIDD +LVG++S+ DLL +
Sbjct: 3 VKDVMITK--VVGVSPDNSVRRAAEIMLANHVSGVPVIDDAGRLVGIISEGDLLRRTELG 60
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
A E+ ++ T E ++N V D+M+ P+VV T+L + L+
Sbjct: 61 REATA------ELGTSALTAEEKATAYVRSNAWRVADVMSCDPIVVEGDTSLARVSALMQ 114
Query: 205 ETKYRRLPVV 214
E +RLPV+
Sbjct: 115 EHHIKRLPVM 124
>gi|304314784|ref|YP_003849931.1| CBS domain containing protein [Methanothermobacter marburgensis
str. Marburg]
gi|302588243|gb|ADL58618.1| CBS domain containing protein [Methanothermobacter marburgensis
str. Marburg]
Length = 156
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 73/140 (52%), Gaps = 11/140 (7%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D M T E+ VK + + +A IL E RI+G PV+DD+ KLVG++S+ D++ L +
Sbjct: 4 VKDAMQT--EVITVKRNSKIHDAARILRENRISGAPVVDDEGKLVGVISEGDIMRLIEVH 61
Query: 145 GSGRADNSMFP------EVDSTWK-TFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLE 197
N + P E+ K ++E+ K + K V ++MT V V ++
Sbjct: 62 SPSL--NLLMPSPLDLLELPVRMKHEYDEIAKGIRKAAMMRVEEIMTDRVVTVHPDASVS 119
Query: 198 DAARLLLETKYRRLPVVDAD 217
DAA L+ +RLPVV+ D
Sbjct: 120 DAAELMDRHDIKRLPVVEDD 139
>gi|378825222|ref|YP_005187954.1| hypothetical protein SFHH103_00630 [Sinorhizobium fredii HH103]
gi|365178274|emb|CCE95129.1| hypothetical protein SFHH103_00630 [Sinorhizobium fredii HH103]
Length = 222
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 70/137 (51%), Gaps = 18/137 (13%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL-----LA 139
V D MT + V P +V +A +++E ++G PV+DD+ LVG++S+ DL L
Sbjct: 3 VKDVMTIA--IVKVSPDNSVRQAANVMLENHVSGIPVVDDEGHLVGIISEGDLIRRTELG 60
Query: 140 LDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDA 199
+ +I + A+ +M E E K + VGD MT APV + E +L
Sbjct: 61 IGAI--ASLAEMAMPAE---------ERAGAYVKRSSWKVGDAMTSAPVTIDEDASLTQV 109
Query: 200 ARLLLETKYRRLPVVDA 216
A+L+LE +R+PV A
Sbjct: 110 AKLMLERGIKRIPVTRA 126
>gi|209885943|ref|YP_002289800.1| transporter [Oligotropha carboxidovorans OM5]
gi|337740480|ref|YP_004632208.1| CBS domain-containing protein [Oligotropha carboxidovorans OM5]
gi|386029497|ref|YP_005950272.1| hypothetical protein OCA4_c12510 [Oligotropha carboxidovorans OM4]
gi|209874139|gb|ACI93935.1| CBS:transport associated [Oligotropha carboxidovorans OM5]
gi|336094565|gb|AEI02391.1| CBS domain protein [Oligotropha carboxidovorans OM4]
gi|336098144|gb|AEI05967.1| CBS domain protein [Oligotropha carboxidovorans OM5]
Length = 242
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 58/121 (47%), Gaps = 13/121 (10%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V TT+ EA ++++ I+G PV+D KLVG++S+ D + I +
Sbjct: 14 VTEDTTLREAALLMLQNHISGLPVVDKFGKLVGVISEGDFVRRVEIGTQTKR-------- 65
Query: 158 DSTWKTF----NEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPV 213
+ W F G+ VG +M P PV + E TNLED RL+ + +RLPV
Sbjct: 66 -ARWLAFFIGPGRAATEFVHERGRKVGVVMNPQPVTITEDTNLEDIVRLMEKHNIKRLPV 124
Query: 214 V 214
V
Sbjct: 125 V 125
>gi|429195455|ref|ZP_19187487.1| CBS domain protein [Streptomyces ipomoeae 91-03]
gi|428668821|gb|EKX67812.1| CBS domain protein [Streptomyces ipomoeae 91-03]
Length = 250
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 67/136 (49%), Gaps = 12/136 (8%)
Query: 85 VGDFMTTKEELHVVKPT--TTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS 142
VG MTT VV+ T E +L + RI+G PV+D+D K++G++S+ DL+A +
Sbjct: 6 VGSVMTTD----VVRAEYGTPFKEVARLLADHRISGLPVVDEDDKVIGVISETDLIARQA 61
Query: 143 ISGSGRADNSMFPEVDSTWKTFNE-VQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAAR 201
+ F T+ ++ +KTN + G LMT + + +AAR
Sbjct: 62 ATPEPYEPRRRF-----TFPGLTRGARRQAAKTNARTAGRLMTAPAITAHADDTIVEAAR 116
Query: 202 LLLETKYRRLPVVDAD 217
+ + + RLPV+D +
Sbjct: 117 TMAQHQVERLPVLDEE 132
>gi|210624234|ref|ZP_03294262.1| hypothetical protein CLOHIR_02218 [Clostridium hiranonis DSM 13275]
gi|210153128|gb|EEA84134.1| hypothetical protein CLOHIR_02218 [Clostridium hiranonis DSM 13275]
Length = 155
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 65/125 (52%), Gaps = 2/125 (1%)
Query: 94 ELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSM 153
++ VK TV + ++L++ +I G PV+D+D K++G++S+ D+L + R N
Sbjct: 14 DVKTVKKDDTVSDVAKMLIQDKIGGLPVVDEDNKVIGIISETDILKKEKYIEPPRVIN-- 71
Query: 154 FPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPV 213
F + ++K L + V DLMT V V E +D A ++++ R+PV
Sbjct: 72 FLQGLIFLDDMKNLEKDLKRIAAYKVEDLMTEDIVTVHEDDKFDDVANVMIKKSINRVPV 131
Query: 214 VDADG 218
VD DG
Sbjct: 132 VDDDG 136
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Query: 83 YTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 138
Y V D MT E++ V D+ ++++K I PV+DDD K+ G++ YD++
Sbjct: 95 YKVEDLMT--EDIVTVHEDDKFDDVANVMIKKSINRVPVVDDDGKIKGIICRYDII 148
>gi|27381185|ref|NP_772714.1| hypothetical protein blr6074 [Bradyrhizobium japonicum USDA 110]
gi|27354352|dbj|BAC51339.1| blr6074 [Bradyrhizobium japonicum USDA 110]
Length = 242
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 64/120 (53%), Gaps = 5/120 (4%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P T++ EA I++++ ++G V+DD KLVG+VS+ D + I G+GR +
Sbjct: 14 VTPDTSIVEAANIMLKRHVSGLTVVDDTGKLVGVVSEGDFIRRSEI-GTGRKRGRWLRFI 72
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
K+ ++ +G+ V ++MT +PV + E T L + L+ +RLPVV D
Sbjct: 73 LGPGKSASD----FVHEHGRKVSEVMTASPVTITEDTALAEIVDLMERNNVKRLPVVRGD 128
>gi|299132334|ref|ZP_07025529.1| putative signal transduction protein with CBS domains [Afipia sp.
1NLS2]
gi|298592471|gb|EFI52671.1| putative signal transduction protein with CBS domains [Afipia sp.
1NLS2]
Length = 242
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 58/117 (49%), Gaps = 13/117 (11%)
Query: 102 TTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTW 161
T++ EA +++E RI+G PV+D KLVG++++ D + I R + W
Sbjct: 18 TSLREAALLMLENRISGLPVVDKFGKLVGIITEGDFVRRAEIGTQTRR---------ARW 68
Query: 162 KTF----NEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVV 214
F G+ VG++M PV V E T+LE+ RL+ + +RLPVV
Sbjct: 69 LAFFVGPGRAATEFVHEQGRKVGEVMNAQPVTVTEQTSLEEIVRLMEKHNIKRLPVV 125
>gi|297617946|ref|YP_003703105.1| hypothetical protein Slip_1785 [Syntrophothermus lipocalidus DSM
12680]
gi|297145783|gb|ADI02540.1| CBS domain containing membrane protein [Syntrophothermus
lipocalidus DSM 12680]
Length = 149
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 70/132 (53%), Gaps = 12/132 (9%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA----LDS 142
D MT +E+ V+P +V+E +IL + RI+G PV+DD KLVG+V++ DL+ L+
Sbjct: 5 DIMT--KEVITVRPEQSVEEVAKILADNRISGVPVVDDAGKLVGVVTESDLMIKARDLEL 62
Query: 143 ISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARL 202
D+ +F + + + FNE L + V D+MT V E T L D ARL
Sbjct: 63 PFYITLFDSIIFLQ---SPRRFNE---ELKRFTASKVKDIMTTQVAAVDEDTPLFDIARL 116
Query: 203 LLETKYRRLPVV 214
+ R+PVV
Sbjct: 117 MTAKSINRVPVV 128
>gi|260654571|ref|ZP_05860061.1| putative CBS domain protein [Jonquetella anthropi E3_33 E1]
gi|424844536|ref|ZP_18269147.1| CBS-domain-containing membrane protein [Jonquetella anthropi DSM
22815]
gi|260630587|gb|EEX48781.1| putative CBS domain protein [Jonquetella anthropi E3_33 E1]
gi|363985974|gb|EHM12804.1| CBS-domain-containing membrane protein [Jonquetella anthropi DSM
22815]
Length = 154
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 71/142 (50%), Gaps = 19/142 (13%)
Query: 82 VYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL--LA 139
+ T GD M K +L V T TV +AL +L R++G PV+D W+LVG S+ D LA
Sbjct: 4 IMTAGDLM--KRDLSAVLETDTVADALRVLHSHRLSGVPVVDAYWRLVGFFSEADALELA 61
Query: 140 LDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKM----VGDLMTPAPVVVRETTN 195
L + + + ++ +F E +KLLS ++ V M P+ V + +
Sbjct: 62 LPTTAQILQQESFLFDE-----------EKLLSAQFARIYSQPVSKYMQRPPLSVHPSAH 110
Query: 196 LEDAARLLLETKYRRLPVVDAD 217
+ A+L+L+ K R+ V D D
Sbjct: 111 ILSVAQLMLDKKLYRIAVTDRD 132
>gi|225848313|ref|YP_002728476.1| inosine-5'-monophosphate dehydrogenase [Sulfurihydrogenibium
azorense Az-Fu1]
gi|225643808|gb|ACN98858.1| inosine-5'-monophosphate dehydrogenase [Sulfurihydrogenibium
azorense Az-Fu1]
Length = 488
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 62/122 (50%), Gaps = 31/122 (25%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
+KP TV EAL I+ +I+G PV+DD+ KLVG++++ DL +
Sbjct: 101 IKPNQTVQEALNIMSIYKISGVPVVDDENKLVGILTNRDLRFIHK--------------- 145
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVV-VRETTNLEDAARLLLETKYRRLPVVDA 216
K +N K V + MT AP++ +E +L+DA +L + K +LPVVD
Sbjct: 146 ----KDYN-----------KPVYEFMTKAPLITAKEGISLDDAIEILQKHKVEKLPVVDD 190
Query: 217 DG 218
+G
Sbjct: 191 NG 192
Score = 37.4 bits (85), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 138
V +FMT K L K ++D+A+EIL + ++ PV+DD+ L GL++ D++
Sbjct: 152 VYEFMT-KAPLITAKEGISLDDAIEILQKHKVEKLPVVDDNGVLKGLITIKDIV 204
>gi|440746999|ref|ZP_20926260.1| CBS domain protein [Mariniradius saccharolyticus AK6]
gi|436484628|gb|ELP40604.1| CBS domain protein [Mariniradius saccharolyticus AK6]
Length = 152
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 69/145 (47%), Gaps = 30/145 (20%)
Query: 74 NSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVS 133
N P S V D MTT L +P T+D+ L L K+I+G PV+D KLVG++S
Sbjct: 15 NQTQPIS----VRDHMTT--NLITFRPDDTIDKVLVTLASKKISGAPVLDHSGKLVGIIS 68
Query: 134 DYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRET 193
+ D L S+ G+ N+ K + KM D+MT +P +
Sbjct: 69 EVDCL---SVVIKGQYTNT---------------PKFSALVEEKMTKDVMTLSPDI---- 106
Query: 194 TNLEDAARLLLETKYRRLPVVDADG 218
+ DAA+L LE K RR PVV DG
Sbjct: 107 -TIFDAAQLFLEHKIRRFPVV-KDG 129
>gi|386401293|ref|ZP_10086071.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Bradyrhizobium sp. WSM1253]
gi|385741919|gb|EIG62115.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Bradyrhizobium sp. WSM1253]
Length = 242
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 65/120 (54%), Gaps = 5/120 (4%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P T++ EA I++++ ++G V+DD KLVG+VS+ D + I G+GR +
Sbjct: 14 VTPDTSIVEAANIMLKRHVSGLTVVDDAGKLVGVVSEGDFIRRSEI-GTGRKRGRWLRFI 72
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
+ K+ ++ +G+ V ++MT +PV + E T L + L+ +RLPV+ D
Sbjct: 73 LGSGKSASD----FVHEHGRKVSEVMTRSPVTLTEDTALAEIVDLMERNNVKRLPVIRGD 128
>gi|366163366|ref|ZP_09463121.1| putative signal transduction protein with CBS domains [Acetivibrio
cellulolyticus CD2]
Length = 149
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 68/138 (49%), Gaps = 22/138 (15%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGS 146
D M+T ++ +K TTV+E +L EK I+G PV+DD K++G+VS+ DLL D
Sbjct: 5 DIMST--DVIAIKKDTTVEEIAHLLSEKNISGVPVLDDSSKVIGMVSEKDLLYKDI---- 58
Query: 147 GRADNSMFPEVDSTW---------KTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLE 197
FP V K +NE + L T + ++MT V + T +E
Sbjct: 59 ----EPHFPPVVEILGGLIFLKSVKQYNEELRKLVATRAE---EIMTKKVVTIGPDTEVE 111
Query: 198 DAARLLLETKYRRLPVVD 215
A L++E R+PVVD
Sbjct: 112 RIAELMIEKDINRIPVVD 129
>gi|359393632|ref|ZP_09186685.1| hypothetical protein KUC_0271 [Halomonas boliviensis LC1]
gi|357970879|gb|EHJ93324.1| hypothetical protein KUC_0271 [Halomonas boliviensis LC1]
Length = 229
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 68/134 (50%), Gaps = 20/134 (14%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL---ALDSI 143
D MT K + V P V E ++L+ RI+ PV+DDD +++G+VS+ DL+ DS
Sbjct: 5 DIMTPK--VVSVGPGAEVREIAQLLLNHRISAVPVVDDDHRVIGIVSEGDLMRRVKNDSD 62
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLS---KTNGKMVGDLMTPAPVVVRETTNLEDAA 200
GS S W + K K++G+ ++MTP P+ V E T L A
Sbjct: 63 HGS------------SWWLSLFTGGKDAGDYVKSHGRKAHEVMTPNPMTVEENTPLHTIA 110
Query: 201 RLLLETKYRRLPVV 214
R+L + +R+PV+
Sbjct: 111 RMLEKHHIKRVPVL 124
>gi|150020570|ref|YP_001305924.1| signal transduction protein [Thermosipho melanesiensis BI429]
gi|149793091|gb|ABR30539.1| putative signal transduction protein with CBS domains [Thermosipho
melanesiensis BI429]
Length = 147
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 66/118 (55%), Gaps = 11/118 (9%)
Query: 103 TVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL--ALDSISGSGRADNSMFPEVDST 160
+V L+IL + ITG PV+++D+K+VG +S+ D++ AL S S S P+
Sbjct: 19 SVSRVLKILSRQEITGVPVVNEDYKVVGFISENDIIRAALPS-YFSLLQTASFIPD---- 73
Query: 161 WKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADG 218
N+ + L K + K V ++MT +V++E T L AA L++ + LPVVD DG
Sbjct: 74 ---LNQFVRSLKKISNKSVSEIMTKPAIVIKEDTPLLHAADLMIRHSLKILPVVD-DG 127
>gi|307726495|ref|YP_003909708.1| putative signal transduction protein with CBS domains [Burkholderia
sp. CCGE1003]
gi|307587020|gb|ADN60417.1| putative signal transduction protein with CBS domains [Burkholderia
sp. CCGE1003]
Length = 229
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 60/119 (50%), Gaps = 5/119 (4%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P T+ E + VEKRI+G PV+D D +VG++S+ DLL I R S
Sbjct: 14 VTPDMTIREVARLFVEKRISGAPVLDPDGSVVGMISEGDLLRRSEIGTDERRRVSWL--- 70
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDA 216
W +E + + KT+G V D+MT + V T L + A +L +R+PV +A
Sbjct: 71 -DFWSASHEARDYV-KTHGTKVSDVMTTDVITVEPDTLLGEVAAILETRGIKRVPVTEA 127
>gi|409399062|ref|ZP_11249434.1| hypothetical protein MXAZACID_00460 [Acidocella sp. MX-AZ02]
gi|409131706|gb|EKN01395.1| hypothetical protein MXAZACID_00460 [Acidocella sp. MX-AZ02]
Length = 233
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 69/137 (50%), Gaps = 15/137 (10%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D MT ++ + P T++ A +V +I+G PV+D +LVG++S+ DLL +
Sbjct: 3 VADVMT--RDVVAIDPQTSLATAAGWMVSHQISGLPVLDQAGRLVGILSEGDLLHRPELG 60
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLS----KTNGKMVGDLMTPAPVVVRETTNLEDAA 200
G+ + W ++L+ T+G+ VGD+MT P VR L AA
Sbjct: 61 TCGK---------QAGWMRGIMRAEILAADYAHTHGRQVGDVMTRNPSFVRPDLPLAKAA 111
Query: 201 RLLLETKYRRLPVVDAD 217
L+ + + +RLPV+ +
Sbjct: 112 DLMRQKQVKRLPVLQGE 128
>gi|85716122|ref|ZP_01047098.1| hypothetical protein NB311A_11100 [Nitrobacter sp. Nb-311A]
gi|85697121|gb|EAQ35003.1| hypothetical protein NB311A_11100 [Nitrobacter sp. Nb-311A]
Length = 242
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 63/125 (50%), Gaps = 15/125 (12%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P TTV +A ++ + I+G PV++ + K+VG++S+ D + I R
Sbjct: 14 VHPDTTVVDAANTMLRQHISGLPVVNAEGKMVGIISEGDFIRRAEIGTQRRR-------- 65
Query: 158 DSTWKTF-----NEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLP 212
+ W F + + + G+ VG++MTP P V E +LED ++ + + +RLP
Sbjct: 66 -ARWLAFLLGAGRDASDFVHE-QGRKVGEIMTPDPYTVSEDASLEDIVTMMEQKRVKRLP 123
Query: 213 VVDAD 217
V+ D
Sbjct: 124 VMRND 128
>gi|398356193|ref|YP_006529520.1| hypothetical protein USDA257_p01020 [Sinorhizobium fredii USDA 257]
gi|399995408|ref|YP_006575646.1| hypothetical protein SFHH103_04632 [Sinorhizobium fredii HH103]
gi|365182255|emb|CCE99105.1| hypothetical protein SFHH103_04632 [Sinorhizobium fredii HH103]
gi|390131440|gb|AFL54820.1| hypothetical protein USDA257_p01020 [Sinorhizobium fredii USDA 257]
Length = 226
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 69/134 (51%), Gaps = 19/134 (14%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGS 146
D MT + + + P +V A +++E I+G PV+DD+ LVG++++ DLL
Sbjct: 5 DIMTRR--VIAISPEHSVKHAACVMLENHISGLPVLDDNESLVGILTEGDLLR------- 55
Query: 147 GRADNSMFPEVDSTWK----TFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARL 202
RA+ + P + W+ T E ++ K N VGD+MTP V V E T ++ A
Sbjct: 56 -RAE--LGP---AAWRGTGSTHEEAPEIFIKGNSWRVGDVMTPGVVTVDEDTPVDRIAAA 109
Query: 203 LLETKYRRLPVVDA 216
+ +R+PVV A
Sbjct: 110 MKTHDIKRVPVVRA 123
>gi|350560258|ref|ZP_08929098.1| putative signal transduction protein with CBS domains
[Thioalkalivibrio thiocyanoxidans ARh 4]
gi|349782526|gb|EGZ36809.1| putative signal transduction protein with CBS domains
[Thioalkalivibrio thiocyanoxidans ARh 4]
Length = 160
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 65/126 (51%), Gaps = 14/126 (11%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P T+V+ +++LV+K I G PV+D+ +++G+V+ DL+ R ++ P
Sbjct: 14 VGPATSVEALIDLLVDKGINGLPVVDEFGRVLGMVTTGDLIH--------RVADAHVPSR 65
Query: 158 DSTWK------TFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRL 211
DS W+ F + G G +M+ P V + ++ AARLL+E + + L
Sbjct: 66 DSIWRESLYKSVFRHDDSEPNPAEGVTAGAVMSRNPAYVLPSDDMAVAARLLIEHRVKSL 125
Query: 212 PVVDAD 217
PV+D +
Sbjct: 126 PVLDEE 131
>gi|220922314|ref|YP_002497616.1| hypothetical protein Mnod_2338 [Methylobacterium nodulans ORS 2060]
gi|219946921|gb|ACL57313.1| CBS domain containing membrane protein [Methylobacterium nodulans
ORS 2060]
Length = 247
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 71/139 (51%), Gaps = 25/139 (17%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGS 146
D MT +E+ V+ +V+ A+ +++EKRI+G PV+D D +VG+VS+ DLLA
Sbjct: 5 DIMT--KEVTSVRADLSVELAIALMLEKRISGLPVLDPDCAVVGIVSEGDLLA------- 55
Query: 147 GRADNSMFPEVDSTWKTFNEVQKLLS---------KTNGKMVGDLMTPAPVVVRETTNLE 197
PE+ + VQ L+S + G+ VGD+MT V T L+
Sbjct: 56 -------RPELGTARPKPGWVQYLISPGRLAEAYARERGRRVGDVMTREVVTASPETPLD 108
Query: 198 DAARLLLETKYRRLPVVDA 216
+ L+ + +R+P+V+
Sbjct: 109 EIVDLMTRRRIKRVPIVEG 127
>gi|52632000|gb|AAU85400.1| inosine-5'-monophosphate dehydrogenase [uncultured archaeon
GZfos12E1]
Length = 166
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 70/145 (48%), Gaps = 21/145 (14%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V + MTT ++ KP + ++ RI+G PVIDD K++G++S+ D++ L +
Sbjct: 9 VKELMTT--DVIAFKPGEKIPHVVKAFRTNRISGAPVIDDQRKVIGIISEADIMKLTA-- 64
Query: 145 GSGRADNSMFPEVD-----------STWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRET 193
FP++D S K ++ + V D+MT V +
Sbjct: 65 ------TVPFPDIDPLNPFPVFSLSSYMKKVKKIPDEIETLFEGYVKDVMTKKTVTISPD 118
Query: 194 TNLEDAARLLLETKYRRLPVVDADG 218
++ DAARL+ + ++R+PVVD +G
Sbjct: 119 NSISDAARLMHKNDFKRIPVVDDEG 143
>gi|172065495|ref|YP_001816207.1| signal-transduction protein [Burkholderia ambifaria MC40-6]
gi|171997737|gb|ACB68654.1| putative signal-transduction protein with CBS domains [Burkholderia
ambifaria MC40-6]
Length = 230
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 66/129 (51%), Gaps = 6/129 (4%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGS 146
D MTT + P +V E ++L E I+ PVID + KL+G+VS+ DL+ I
Sbjct: 5 DVMTTP--VIFASPEMSVQETAKLLAEHSISAVPVIDAEGKLIGIVSEGDLVRRVEIGTH 62
Query: 147 GRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLET 206
R + + ST + +E K S+T V DLM+ V V E T L + A LL
Sbjct: 63 ARRRSWWLELLASTRELASEYVKEHSQT----VKDLMSVDVVTVAEDTPLSEVAELLERH 118
Query: 207 KYRRLPVVD 215
+ +R+PVVD
Sbjct: 119 RIKRVPVVD 127
>gi|407974975|ref|ZP_11155882.1| hypothetical protein NA8A_11740 [Nitratireductor indicus C115]
gi|407429542|gb|EKF42219.1| hypothetical protein NA8A_11740 [Nitratireductor indicus C115]
Length = 216
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 68/129 (52%), Gaps = 13/129 (10%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGS 146
D MT ++ + V A+ +++E+ ++G PV D D KLVG++++ DL++ I S
Sbjct: 5 DIMT--RDVATISVDAHVRHAVSVMLERGVSGLPVTDSDGKLVGIITEGDLMSRKEIGRS 62
Query: 147 --GRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
R D+ M E N+++ + N VGD+M+P V V +TT+L ++L
Sbjct: 63 LLDRQDHPMTDE--------NDLKNYI-HCNSWRVGDVMSPEVVTVADTTSLATVTEMML 113
Query: 205 ETKYRRLPV 213
+R+PV
Sbjct: 114 SRNIKRIPV 122
>gi|443316995|ref|ZP_21046419.1| CBS-domain-containing membrane protein [Leptolyngbya sp. PCC 6406]
gi|442783400|gb|ELR93316.1| CBS-domain-containing membrane protein [Leptolyngbya sp. PCC 6406]
Length = 163
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 71/136 (52%), Gaps = 5/136 (3%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TV D MT + V + EA++I+ ++RI+G PVI + LVG++S+ DL+
Sbjct: 4 TVADVMT--RDPITVGSNALLQEAIQIMADQRISGLPVISAEGSLVGILSETDLMW--QA 59
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRE-TTNLEDAARL 202
+G+ M + K + L K G+ V ++M+ PVV + +L AA+L
Sbjct: 60 TGAPLPAYVMLLDSVIYLKNPTRFNQELHKALGQTVAEVMSDHPVVTTQPEASLRAAAQL 119
Query: 203 LLETKYRRLPVVDADG 218
+ + + RRLPV+D G
Sbjct: 120 MHDKQVRRLPVLDDSG 135
>gi|431799366|ref|YP_007226270.1| hypothetical protein Echvi_4053 [Echinicola vietnamensis DSM 17526]
gi|430790131|gb|AGA80260.1| putative transcriptional regulator, contains C-terminal CBS domains
[Echinicola vietnamensis DSM 17526]
Length = 153
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 65/147 (44%), Gaps = 25/147 (17%)
Query: 68 SGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWK 127
G A +S V + MTT L P T+D +++L +KRI+G PV+DD
Sbjct: 6 QGVRMAEPQTRASQPILVSNHMTTN--LTTFHPDDTIDHVVQVLTQKRISGAPVLDDGQN 63
Query: 128 LVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAP 187
LVG++S+ D L + I G +N ++ + M D++T P
Sbjct: 64 LVGIISEVDCLK-EIIRGK-----------------YNNTPRMAGRVREHMTKDVVTMDP 105
Query: 188 VVVRETTNLEDAARLLLETKYRRLPVV 214
V + DAA LE K RR PV+
Sbjct: 106 EV-----TIFDAAHRFLELKIRRFPVL 127
>gi|148257031|ref|YP_001241616.1| hypothetical protein BBta_5760 [Bradyrhizobium sp. BTAi1]
gi|146409204|gb|ABQ37710.1| hypothetical protein BBta_5760 [Bradyrhizobium sp. BTAi1]
Length = 242
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 63/120 (52%), Gaps = 5/120 (4%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P T++ EA I++++ ++G PV+D KL+G+VS+ D + I G+GR +
Sbjct: 14 VTPDTSIVEAANIMLQRHVSGLPVVDASGKLIGVVSEGDFIRRTEI-GTGRKRGRWLRFI 72
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
K+ + +G+ V ++MT +P+ + E L + ++ + +RLPVV D
Sbjct: 73 LGPGKSAAD----FVHEHGRKVSEVMTKSPLTITEDAALAEIVEIMEKNHVKRLPVVKGD 128
>gi|289774171|ref|ZP_06533549.1| conserved hypothetical protein [Streptomyces lividans TK24]
gi|289704370|gb|EFD71799.1| conserved hypothetical protein [Streptomyces lividans TK24]
Length = 228
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 68/137 (49%), Gaps = 17/137 (12%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TV D MT V P + + +L + +++ PV++ + +++GLVS+ DLL +
Sbjct: 7 TVNDVMT--HTAVAVGPEAPFKDIIALLDQWKVSALPVLEGEGRVIGLVSEADLLPKEEF 64
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKL--LSKTNGKMVGDLMTPAPVVVRETTNLEDAAR 201
DS F ++++L L+K G D+MT V V L AAR
Sbjct: 65 R-------------DSDPDRFTQMRRLTDLAKAGGLTAADVMTAPAVTVHPDATLAQAAR 111
Query: 202 LLLETKYRRLPVVDADG 218
++ + K +RLPVV+A+G
Sbjct: 112 IMAQRKVKRLPVVNAEG 128
>gi|392410785|ref|YP_006447392.1| CBS-domain-containing membrane protein [Desulfomonile tiedjei DSM
6799]
gi|390623921|gb|AFM25128.1| CBS-domain-containing membrane protein [Desulfomonile tiedjei DSM
6799]
Length = 149
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 67/133 (50%), Gaps = 8/133 (6%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
+ D MT E+ V P T + E IL EKRI G PV+D+D ++G+V + DL+
Sbjct: 4 IADIMT--REVITVTPDTPIRELARILAEKRINGVPVVDEDGTVLGVVCESDLIE----Q 57
Query: 145 GSGRADNSMFPEVDSTWKTFN--EVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARL 202
G ++F +DS N +QK + V ++ + V V +++ +AA+L
Sbjct: 58 GRPLHIPTVFVILDSFIPLENPWRLQKEFKRITATKVEEIYSRPAVCVSPESDVSEAAKL 117
Query: 203 LLETKYRRLPVVD 215
+ E KY +PV D
Sbjct: 118 MSEKKYYTIPVCD 130
>gi|288574950|ref|ZP_06393307.1| CBS domain containing membrane protein [Dethiosulfovibrio
peptidovorans DSM 11002]
gi|288570691|gb|EFC92248.1| CBS domain containing membrane protein [Dethiosulfovibrio
peptidovorans DSM 11002]
Length = 158
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 62/126 (49%), Gaps = 13/126 (10%)
Query: 94 ELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSM 153
+L V V +A+ +L ++G PVIDDDW+LVG +S+ D+L +
Sbjct: 13 DLTAVMSQDRVFDAIHVLYSHGLSGLPVIDDDWRLVGYLSESDIL---------KPTIPT 63
Query: 154 FPEVDSTWKTFNEVQKLLSKTNGKM----VGDLMTPAPVVVRETTNLEDAARLLLETKYR 209
+ E+ + F + LL + G M V D M PV V T++ A ++L K++
Sbjct: 64 YLEILAQSTFFGNEENLLFQRFGAMKNDLVKDFMQKDPVFVFPDTSIMTVADMMLRKKFK 123
Query: 210 RLPVVD 215
RLPV +
Sbjct: 124 RLPVTE 129
>gi|456392178|gb|EMF57521.1| CBS domain-containing protein [Streptomyces bottropensis ATCC
25435]
Length = 230
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 66/139 (47%), Gaps = 17/139 (12%)
Query: 83 YTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS 142
+TV D MT + V E + +L ++R++ PV+D + ++VG+VS+ DLL +
Sbjct: 6 HTVSDVMTYP--VAAVGREAGFKEIVRLLQDRRVSALPVLDGEGRVVGVVSEADLLPKEE 63
Query: 143 ISGSGRADNSMFPEVDSTWKTFNEVQKL--LSKTNGKMVGDLMTPAPVVVRETTNLEDAA 200
DS + ++++L L+K G DLMT + R AA
Sbjct: 64 FR-------------DSDPDRYTQLRRLSDLAKAGGSTAADLMTSPALTTRPDATSAQAA 110
Query: 201 RLLLETKYRRLPVVDADGW 219
R++ + +RLPVV+ G
Sbjct: 111 RIMAHARVKRLPVVNEQGM 129
Score = 38.1 bits (87), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 81/190 (42%), Gaps = 40/190 (21%)
Query: 54 DRVSALRRSSAVFASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVE 113
DR + LRR S + +G TA D MT+ +P T +A I+
Sbjct: 70 DRYTQLRRLSDLAKAGGSTA------------ADLMTSPA--LTTRPDATSAQAARIMAH 115
Query: 114 KRITGFPVIDDDWKLVGLVSDYDLL-----ALDSISGSGRAD--NSMFPEVDSTWKTFNE 166
R+ PV+++ L G+VS DLL A D I+ R + +FP ST + E
Sbjct: 116 ARVKRLPVVNEQGMLEGIVSRADLLKVFLRADDEIAEEVRREVVAPLFPPPGSTIRV--E 173
Query: 167 VQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGWNYHKRKC 226
V +++ G+ VR+T+ + AARL+ + VVD D ++ R
Sbjct: 174 VHDGVARLAGR------------VRDTSLIPVAARLVRAVEG----VVDVD-FDLEGRGS 216
Query: 227 SKGGSSNKTC 236
S+ ++ +
Sbjct: 217 SEATATEGSV 226
>gi|219848345|ref|YP_002462778.1| hypothetical protein Cagg_1435 [Chloroflexus aggregans DSM 9485]
gi|219542604|gb|ACL24342.1| CBS domain containing protein [Chloroflexus aggregans DSM 9485]
Length = 427
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 74/147 (50%), Gaps = 13/147 (8%)
Query: 73 ANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLV 132
A A P+ TV MT ++ V T V E + +L+E+ + PVID D K+VG+V
Sbjct: 110 AGGALPAH--LTVAHVMT--HDVVSVTVDTPVGEVVRLLIERGLRAMPVIDADRKVVGIV 165
Query: 133 SDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLS-KTNGKMVGDLMTPAPVVVR 191
+D DLL R + + + + +L + + + VG++MTP P +
Sbjct: 166 TDADLLQ--------RGVSQLPLHLQQLLPNDDRAAQLAAVASRPERVGEVMTPNPTTIP 217
Query: 192 ETTNLEDAARLLLETKYRRLPVVDADG 218
T +L AA ++ + ++RLPVVD +G
Sbjct: 218 ATASLAQAALVMTKNDHKRLPVVDNEG 244
Score = 37.7 bits (86), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 64/144 (44%), Gaps = 24/144 (16%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFP-----VIDDDWKLVGLVSDYDLL 138
TVG+ M ++ VV P T++ E L+ RI P VID D +++G+VSD D+L
Sbjct: 279 TVGEVMA--RDVPVVTPDTSLSETLD-----RILSTPRRRAVVIDQDRRVIGIVSDGDIL 331
Query: 139 ALDSISGSGRADNSMFPEVDSTWKTF----NEVQKLLSKTNGKMVGDLMTPAPVVVRETT 194
RA + P + + + +L + ++MT + V T
Sbjct: 332 R--------RAMRPVSPGLLQRFAMWIGGGTRSPELALALQNQTAANVMTSPVITVTPDT 383
Query: 195 NLEDAARLLLETKYRRLPVVDADG 218
+ A ++ + +RLPV+D G
Sbjct: 384 PITTAIEQMIAHRIKRLPVIDDQG 407
>gi|242279465|ref|YP_002991594.1| hypothetical protein Desal_1995 [Desulfovibrio salexigens DSM 2638]
gi|242122359|gb|ACS80055.1| CBS domain containing membrane protein [Desulfovibrio salexigens
DSM 2638]
Length = 149
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 69/121 (57%), Gaps = 8/121 (6%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALD-SISGSGRADNSMFPE 156
++P T V A ++++EK + G PV+D KL+G++ DL+A +IS S+F
Sbjct: 15 LEPDTDVATAAKLMLEKHLNGLPVVDRSGKLIGVLCQSDLVAQQKTISMP-----SLFTI 69
Query: 157 VDS--TWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVV 214
+D ++ + +++K ++K V MTP P+ + T++E A L++E K+ LPVV
Sbjct: 70 LDGFISFSSNEDLEKEVNKIAATKVEHAMTPDPITIEPDTSIEKIADLMVERKFYTLPVV 129
Query: 215 D 215
+
Sbjct: 130 E 130
>gi|419602027|ref|ZP_14136612.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli 151-9]
gi|380581892|gb|EIB03600.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli 151-9]
Length = 484
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 59/122 (48%), Gaps = 33/122 (27%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P +V EALEI+ E RI+G PVID D KL+G++++ DL R +N
Sbjct: 99 VGPKASVAEALEIMAEYRISGVPVIDSDRKLIGILTNRDL----------RFENDY---- 144
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVR-ETTNLEDAARLLLETKYRRLPVVDA 216
+V ++MT AP++ + L+DA ++ + K +LP+VD
Sbjct: 145 ------------------SNLVENIMTKAPLITAPKGCTLDDAEKIFSKNKVEKLPIVDE 186
Query: 217 DG 218
G
Sbjct: 187 QG 188
>gi|367472385|ref|ZP_09471968.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 285]
gi|365275469|emb|CCD84436.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 285]
Length = 242
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 63/120 (52%), Gaps = 5/120 (4%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P T++ +A I++++ ++G PV+D KLVG+VS+ D + I G+GR +
Sbjct: 14 VSPDTSIVDAANIMLQRHVSGLPVVDASGKLVGVVSEGDFIRRTEI-GTGRKRGRWLRFI 72
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
K+ + +G+ V ++MT +P+ + E L + L+ + +RLPVV D
Sbjct: 73 LGPGKSAAD----FVHEHGRKVSEVMTRSPLTITEDAALAEIVELMEKNHVKRLPVVKGD 128
>gi|419556713|ref|ZP_14094691.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli 84-2]
gi|419563606|ref|ZP_14101005.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli 1098]
gi|419576009|ref|ZP_14112680.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli 1909]
gi|419576676|ref|ZP_14113245.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli 59-2]
gi|419581395|ref|ZP_14117697.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli 1957]
gi|419582858|ref|ZP_14119051.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli 1961]
gi|380534463|gb|EIA59253.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli 84-2]
gi|380543720|gb|EIA67892.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli 1098]
gi|380552181|gb|EIA75747.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli 1909]
gi|380559368|gb|EIA82527.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli 59-2]
gi|380559554|gb|EIA82706.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli 1957]
gi|380564432|gb|EIA87239.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli 1961]
Length = 484
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 59/122 (48%), Gaps = 33/122 (27%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P +V EALEI+ E RI+G PVID D KL+G++++ DL R +N
Sbjct: 99 VGPKASVAEALEIMAEYRISGVPVIDSDRKLIGILTNRDL----------RFENDY---- 144
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVR-ETTNLEDAARLLLETKYRRLPVVDA 216
+V ++MT AP++ + L+DA ++ + K +LP+VD
Sbjct: 145 ------------------SNLVENIMTKAPLITAPKGCTLDDAEKIFSKNKVEKLPIVDE 186
Query: 217 DG 218
G
Sbjct: 187 QG 188
>gi|392382251|ref|YP_005031448.1| conserved hypothetical protein with CBS domain [Azospirillum
brasilense Sp245]
gi|356877216|emb|CCC98025.1| conserved hypothetical protein with CBS domain [Azospirillum
brasilense Sp245]
Length = 233
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 70/132 (53%), Gaps = 11/132 (8%)
Query: 86 GDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISG 145
D MT ++ + P TV EA + ++E RI+G PV D + +L+G++S+ DLL
Sbjct: 4 ADIMT--RQVVTIGPDATVTEAAKRMLENRISGLPVCDSNGRLLGVISEGDLLRRTETGT 61
Query: 146 SGRAD--NSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
RA +MF + + +K++G+ V D MT + + V E T L++ RL+
Sbjct: 62 VRRASWWLAMFAGAPNQAADY-------TKSHGRHVRDAMTESLISVTEETPLDEVVRLM 114
Query: 204 LETKYRRLPVVD 215
+ +R+PV++
Sbjct: 115 EGNRIKRVPVLN 126
>gi|419584401|ref|ZP_14120471.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli 202/04]
gi|419592219|ref|ZP_14127518.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli 37/05]
gi|380564195|gb|EIA87012.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli 202/04]
gi|380566472|gb|EIA89108.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli 37/05]
Length = 484
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 59/122 (48%), Gaps = 33/122 (27%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P +V EALEI+ E RI+G PVID D KL+G++++ DL R +N
Sbjct: 99 VGPKASVAEALEIMAEYRISGVPVIDSDRKLIGILTNRDL----------RFENDY---- 144
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVR-ETTNLEDAARLLLETKYRRLPVVDA 216
+V ++MT AP++ + L+DA ++ + K +LP+VD
Sbjct: 145 ------------------SNLVENIMTKAPLITAPKGCTLDDAEKIFSKNKVEKLPIVDE 186
Query: 217 DG 218
G
Sbjct: 187 QG 188
>gi|419541027|ref|ZP_14080250.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli Z163]
gi|419542397|ref|ZP_14081523.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli 2548]
gi|419548897|ref|ZP_14087509.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli 2685]
gi|419563363|ref|ZP_14100816.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli 1091]
gi|419566417|ref|ZP_14103677.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli 1148]
gi|419568949|ref|ZP_14106075.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli 1417]
gi|419574546|ref|ZP_14111276.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli 1891]
gi|419593635|ref|ZP_14128848.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli LMG
9854]
gi|419596153|ref|ZP_14131161.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli LMG
23341]
gi|419598540|ref|ZP_14133420.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli LMG
23342]
gi|419612673|ref|ZP_14146546.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli H9]
gi|419616952|ref|ZP_14150585.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli Z156]
gi|380515466|gb|EIA41630.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli Z163]
gi|380523246|gb|EIA48899.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli 2548]
gi|380526857|gb|EIA52285.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli 2685]
gi|380538304|gb|EIA62798.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli 1091]
gi|380544627|gb|EIA68645.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli 1417]
gi|380546649|gb|EIA70590.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli 1148]
gi|380549427|gb|EIA73252.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli 1891]
gi|380569738|gb|EIA92174.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli LMG
9854]
gi|380576762|gb|EIA98809.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli LMG
23341]
gi|380577099|gb|EIA99132.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli LMG
23342]
gi|380589839|gb|EIB10876.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli H9]
gi|380594641|gb|EIB15427.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli Z156]
Length = 484
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 59/122 (48%), Gaps = 33/122 (27%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P +V EALEI+ E RI+G PVID D KL+G++++ DL R +N
Sbjct: 99 VGPKASVAEALEIMAEYRISGVPVIDSDRKLIGILTNRDL----------RFENDY---- 144
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVR-ETTNLEDAARLLLETKYRRLPVVDA 216
+V ++MT AP++ + L+DA ++ + K +LP+VD
Sbjct: 145 ------------------SNLVENIMTKAPLITAPKGCTLDDAEKIFSKNKVEKLPIVDE 186
Query: 217 DG 218
G
Sbjct: 187 QG 188
>gi|419554900|ref|ZP_14093023.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli 2698]
gi|380531653|gb|EIA56670.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli 2698]
Length = 484
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 59/122 (48%), Gaps = 33/122 (27%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P +V EALEI+ E RI+G PVID D KL+G++++ DL R +N
Sbjct: 99 VGPKASVAEALEIMAEYRISGVPVIDSDRKLIGILTNRDL----------RFENDY---- 144
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVR-ETTNLEDAARLLLETKYRRLPVVDA 216
+V ++MT AP++ + L+DA ++ + K +LP+VD
Sbjct: 145 ------------------SNLVENIMTKAPLITAPKGCTLDDAEKIFSKNKVEKLPIVDE 186
Query: 217 DG 218
G
Sbjct: 187 QG 188
>gi|297583021|ref|YP_003698801.1| CBS domain-containing membrane protein [Bacillus selenitireducens
MLS10]
gi|297141478|gb|ADH98235.1| CBS domain containing membrane protein [Bacillus selenitireducens
MLS10]
Length = 154
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 72/145 (49%), Gaps = 24/145 (16%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
+V D MT +E +KP T+V++ ++L++ +G PV+DD+ L G+VS+ D++
Sbjct: 3 SVKDVMT--KEAVTIKPDTSVEDTAKLLLQHHFSGVPVVDDEGVLQGVVSEGDIIK---- 56
Query: 144 SGSGRADNSMFPEV----------DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRET 193
RA + P V DS K E+++ +S T +GDLM +
Sbjct: 57 ----RASHIQSPAVLEFLGGLIYLDSPKKYMEELKQAMSLT----IGDLMKTEVITAHPD 108
Query: 194 TNLEDAARLLLETKYRRLPVVDADG 218
++E A +L +R PVVD +G
Sbjct: 109 DSIEQIATKMLSKNIKRFPVVDEEG 133
Score = 37.7 bits (86), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 138
T+GD M T E+ P ++++ ++ K I FPV+D++ K++G++S D++
Sbjct: 93 TIGDLMKT--EVITAHPDDSIEQIATKMLSKNIKRFPVVDEEGKVIGIISRRDIM 145
>gi|359794084|ref|ZP_09296808.1| CBS domain-containing protein [Mesorhizobium alhagi CCNWXJ12-2]
gi|359249670|gb|EHK53253.1| CBS domain-containing protein [Mesorhizobium alhagi CCNWXJ12-2]
Length = 214
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 65/117 (55%), Gaps = 6/117 (5%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P +V A +++++ RI+G PV+DD+ ++VG+V++ DL+ + ++ P +
Sbjct: 8 VSPNHSVRHAAQLMLDHRISGLPVLDDNGRVVGIVTEGDLMRRSEL-----GVQALAP-I 61
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVV 214
+ T + + K++ V D+MT PVVV E T+L A L+ E + +PV+
Sbjct: 62 GRQFTTSEDSARAYVKSHSWKVADVMTADPVVVDEGTSLTQIADLMTERGIKCVPVM 118
>gi|224025972|ref|ZP_03644338.1| hypothetical protein BACCOPRO_02723 [Bacteroides coprophilus DSM
18228]
gi|224019208|gb|EEF77206.1| hypothetical protein BACCOPRO_02723 [Bacteroides coprophilus DSM
18228]
Length = 491
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 61/122 (50%), Gaps = 33/122 (27%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
+K +TV +AL+I+ E +I G PV+DD+ LVG+V++ DL R + M +
Sbjct: 104 IKRGSTVKDALDIMSEYKIGGIPVVDDENYLVGIVTNRDL----------RFEKDMNKRI 153
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRET-TNLEDAARLLLETKYRRLPVVDA 216
D ++MT +V E T++E A+++L E K +LPVVD
Sbjct: 154 D----------------------EVMTKENIVTTEQGTDMETASKILQENKIEKLPVVDK 191
Query: 217 DG 218
DG
Sbjct: 192 DG 193
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 31/51 (60%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL 137
D + TKE + + T ++ A +IL E +I PV+D D KL+GL++ D+
Sbjct: 154 DEVMTKENIVTTEQGTDMETASKILQENKIEKLPVVDKDGKLIGLITYKDI 204
>gi|405377370|ref|ZP_11031313.1| putative signal-transduction protein containing cAMP-binding and
CBS domain containing protein [Rhizobium sp. CF142]
gi|397326183|gb|EJJ30505.1| putative signal-transduction protein containing cAMP-binding and
CBS domain containing protein [Rhizobium sp. CF142]
Length = 223
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 67/130 (51%), Gaps = 8/130 (6%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D MTTK + + P +V A +++ ++ ++G PV+DD+ +L+G++S+ DL+ +S
Sbjct: 3 VKDVMTTK--VVGLSPDHSVRHAAKLMSDQHVSGVPVVDDEGRLLGVISEGDLIRRTELS 60
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+ F +E K G VGD+MTP PV + E L A L+
Sbjct: 61 ------SGAFVLKADMGVGADERANAFVKRCGWRVGDVMTPDPVTIDEDAPLSRVASLMQ 114
Query: 205 ETKYRRLPVV 214
+ +R+PV+
Sbjct: 115 DHGIKRIPVL 124
>gi|307565742|ref|ZP_07628211.1| inosine-5'-monophosphate dehydrogenase [Prevotella amnii CRIS
21A-A]
gi|307345568|gb|EFN90936.1| inosine-5'-monophosphate dehydrogenase [Prevotella amnii CRIS
21A-A]
Length = 494
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 54/120 (45%), Gaps = 31/120 (25%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
++ +TV EAL I+ E I G PV+DDD LVG+V++ DL R + + +
Sbjct: 105 IRRGSTVQEALSIMAEYHIGGIPVVDDDNHLVGIVTNRDL----------RFERCLDKSI 154
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
D + N V + TNL +AA +L E K +LPVVD D
Sbjct: 155 DQVMTSEN---------------------LVTTHQKTNLSEAAEILQENKIEKLPVVDKD 193
Score = 40.0 bits (92), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 28/51 (54%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL 137
D + T E L T + EA EIL E +I PV+D D L+GL++ D+
Sbjct: 155 DQVMTSENLVTTHQKTNLSEAAEILQENKIEKLPVVDKDNHLIGLITYKDI 205
>gi|410696692|gb|AFV75760.1| putative transcriptional regulator, contains C-terminal CBS domains
[Thermus oshimai JL-2]
Length = 150
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 64/127 (50%), Gaps = 15/127 (11%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P T++ A EIL+EKR G PV+D + +L+GL+ DLL R +N F +V
Sbjct: 14 VGPEETLERAAEILLEKRYGGLPVVDGEGRLLGLLQVEDLLP--------RPENIPFSDV 65
Query: 158 DSTWKTFNE------VQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRL 211
++ W+ F E ++++ + V M V L +A R+L+ T R L
Sbjct: 66 EA-WQLFGEWVDEGVLEEIYRRYQKTPVEAAMQREIPRVHPEDPLGEALRILVTTGVRHL 124
Query: 212 PVVDADG 218
PVVD +G
Sbjct: 125 PVVDGEG 131
Score = 40.8 bits (94), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 25/40 (62%)
Query: 179 VGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADG 218
V DLMT PV V LE AA +LLE +Y LPVVD +G
Sbjct: 3 VQDLMTQNPVCVGPEETLERAAEILLEKRYGGLPVVDGEG 42
>gi|419578860|ref|ZP_14115283.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli 1948]
gi|380558598|gb|EIA81774.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli 1948]
Length = 484
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 59/122 (48%), Gaps = 33/122 (27%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P +V EALEI+ E RI+G PVID D KL+G++++ DL R +N
Sbjct: 99 VGPKASVAEALEIMAEYRISGVPVIDSDRKLIGILTNRDL----------RFENDY---- 144
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVR-ETTNLEDAARLLLETKYRRLPVVDA 216
+V ++MT AP++ + L+DA ++ + K +LP+VD
Sbjct: 145 ------------------SNLVENVMTKAPLITAPKGCTLDDAEKIFSKNKVEKLPIVDE 186
Query: 217 DG 218
G
Sbjct: 187 QG 188
>gi|419536025|ref|ZP_14075512.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli 111-3]
gi|419538152|ref|ZP_14077514.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli 90-3]
gi|419570353|ref|ZP_14107401.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli 7--1]
gi|419571601|ref|ZP_14108550.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli 132-6]
gi|419606060|ref|ZP_14140442.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli LMG
9860]
gi|419614073|ref|ZP_14147863.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli H56]
gi|380518968|gb|EIA45057.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli 90-3]
gi|380519320|gb|EIA45403.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli 111-3]
gi|380547600|gb|EIA71519.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli 7--1]
gi|380553290|gb|EIA76812.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli 132-6]
gi|380587448|gb|EIB08647.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli LMG
9860]
gi|380593267|gb|EIB14102.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli H56]
Length = 484
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 59/122 (48%), Gaps = 33/122 (27%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P +V EALEI+ E RI+G PVID D KL+G++++ DL R +N
Sbjct: 99 VGPKASVAEALEIMAEYRISGVPVIDSDRKLIGILTNRDL----------RFENDY---- 144
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVR-ETTNLEDAARLLLETKYRRLPVVDA 216
+V ++MT AP++ + L+DA ++ + K +LP+VD
Sbjct: 145 ------------------SNLVENVMTKAPLITAPKGCTLDDAEKIFSKNKVEKLPIVDE 186
Query: 217 DG 218
G
Sbjct: 187 QG 188
>gi|330816985|ref|YP_004360690.1| signal-transduction protein [Burkholderia gladioli BSR3]
gi|327369378|gb|AEA60734.1| signal-transduction protein [Burkholderia gladioli BSR3]
Length = 230
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 68/126 (53%), Gaps = 5/126 (3%)
Query: 89 MTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGR 148
+ T E +H +P ++ EA +L + I+ PV+D D KLVG+VS+ DLL I G+G
Sbjct: 6 VMTPEVIHA-RPEMSIREAAALLAKHSISALPVLDSDGKLVGIVSEGDLLRRYEI-GTGD 63
Query: 149 ADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKY 208
S + ++ + + E+ K + + V D+MT V V E T L D A +L +
Sbjct: 64 RHRSWWLQLLT---SNRELASEYVKEHERSVKDVMTAEVVTVYEDTPLADIAEVLERHRI 120
Query: 209 RRLPVV 214
+R+PV+
Sbjct: 121 KRVPVM 126
>gi|456353952|dbj|BAM88397.1| conserved hypothetical protein [Agromonas oligotrophica S58]
Length = 242
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 63/120 (52%), Gaps = 5/120 (4%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P T++ +A I++++ ++G PV+D KLVG+VS+ D + I G+GR +
Sbjct: 14 VTPDTSIVDAANIMLQRHVSGLPVVDAAGKLVGVVSEGDFIRRTEI-GTGRKRGRWLRFI 72
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
K+ + +G+ V ++MT +P+ + E L + L+ + +RLPVV D
Sbjct: 73 LGPGKSAAD----FVHEHGRKVSEVMTKSPLTITEDAALAEIVELMEKNHVKRLPVVKGD 128
>gi|305431911|ref|ZP_07401078.1| inosine-5'-monophosphate dehydrogenase [Campylobacter coli JV20]
gi|419595130|ref|ZP_14130242.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli LMG
23336]
gi|419601110|ref|ZP_14135839.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli LMG
23344]
gi|419604436|ref|ZP_14138903.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli LMG
9853]
gi|419608758|ref|ZP_14142942.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli H6]
gi|304444995|gb|EFM37641.1| inosine-5'-monophosphate dehydrogenase [Campylobacter coli JV20]
gi|380574228|gb|EIA96335.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli LMG
23336]
gi|380580165|gb|EIB01932.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli LMG
9853]
gi|380582189|gb|EIB03872.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli LMG
23344]
gi|380585011|gb|EIB06387.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli H6]
Length = 484
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 59/122 (48%), Gaps = 33/122 (27%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P +V EALEI+ E RI+G PVID D KL+G++++ DL R +N
Sbjct: 99 VGPKASVAEALEIMAEYRISGVPVIDSDRKLIGILTNRDL----------RFENDY---- 144
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVR-ETTNLEDAARLLLETKYRRLPVVDA 216
+V ++MT AP++ + L+DA ++ + K +LP+VD
Sbjct: 145 ------------------SNLVENVMTKAPLITAPKGCTLDDAEKIFSKNKVEKLPIVDE 186
Query: 217 DG 218
G
Sbjct: 187 QG 188
>gi|414164101|ref|ZP_11420348.1| hypothetical protein HMPREF9697_02249 [Afipia felis ATCC 53690]
gi|410881881|gb|EKS29721.1| hypothetical protein HMPREF9697_02249 [Afipia felis ATCC 53690]
Length = 242
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 60/130 (46%), Gaps = 31/130 (23%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS------------- 144
V T++ EA +++E RI+G PV+D KLVG++++ D + I
Sbjct: 14 VTEDTSLREAALLMLENRISGLPVVDKFGKLVGIITEGDFVRRAEIGTQTKRARWLAFFV 73
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
G GRA E G+ VG++M PV V E T+LE+ RL+
Sbjct: 74 GPGRAATEFVHE------------------QGRKVGEVMNSRPVTVTELTSLEEVVRLME 115
Query: 205 ETKYRRLPVV 214
+ +RLPVV
Sbjct: 116 KHNIKRLPVV 125
>gi|57167939|ref|ZP_00367078.1| inosine-5'-monophosphate dehydrogenase [Campylobacter coli RM2228]
gi|419545154|ref|ZP_14084081.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli 2553]
gi|419546450|ref|ZP_14085206.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli 2680]
gi|419549792|ref|ZP_14088326.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli 2688]
gi|419553276|ref|ZP_14091532.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli 2692]
gi|419557776|ref|ZP_14095676.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli 80352]
gi|57020313|gb|EAL56982.1| inosine-5'-monophosphate dehydrogenase [Campylobacter coli RM2228]
gi|380522445|gb|EIA48128.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli 2680]
gi|380523867|gb|EIA49502.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli 2553]
gi|380529193|gb|EIA54375.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli 2692]
gi|380532560|gb|EIA57537.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli 2688]
gi|380541258|gb|EIA65530.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli 80352]
Length = 484
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 59/122 (48%), Gaps = 33/122 (27%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P +V EALEI+ E RI+G PVID D KL+G++++ DL R +N
Sbjct: 99 VGPKASVAEALEIMAEYRISGVPVIDSDRKLIGILTNRDL----------RFENDY---- 144
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVR-ETTNLEDAARLLLETKYRRLPVVDA 216
+V ++MT AP++ + L+DA ++ + K +LP+VD
Sbjct: 145 ------------------SNLVENVMTKAPLITAPKGCTLDDAEKIFSKNKVEKLPIVDE 186
Query: 217 DG 218
G
Sbjct: 187 QG 188
>gi|427714431|ref|YP_007063055.1| hypothetical protein Syn6312_3486 [Synechococcus sp. PCC 6312]
gi|427378560|gb|AFY62512.1| CBS domain-containing protein [Synechococcus sp. PCC 6312]
Length = 152
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 74/141 (52%), Gaps = 18/141 (12%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D+MTT H V PT +++ A++++ E+++ G PV+D+ KLVGL+++ DL+ ++
Sbjct: 6 VQDYMTTNP--HTVSPTDSIETAIKLMEERQVRGLPVVDEAGKLVGLITEADLIVREA-- 61
Query: 145 GSGRADNSMFPEVDST-------WKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLE 197
+ P V T +++ + L KT G V D MT PV TT +
Sbjct: 62 -------PLEPPVYLTLLGSVIYFESPEKFHHHLKKTLGMQVQDAMTTDPVTTTPTTPIS 114
Query: 198 DAARLLLETKYRRLPVVDADG 218
+ A+ ++ RLPV+D G
Sbjct: 115 EVAQAIVHHHISRLPVLDETG 135
>gi|407690602|ref|YP_006814186.1| putative signal transduction protein [Sinorhizobium meliloti Rm41]
gi|407321777|emb|CCM70379.1| putative signal transduction protein [Sinorhizobium meliloti Rm41]
Length = 223
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 72/133 (54%), Gaps = 14/133 (10%)
Query: 85 VGDFMTTKEELHVVK--PTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS 142
V D MTTK VVK P +V +A +++ + ++G PV+DDD +L+G++S+ DL+
Sbjct: 3 VKDVMTTK----VVKLSPDNSVRQAAKLMFDHHVSGVPVVDDDGRLLGVISEGDLIRRTE 58
Query: 143 I-SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAAR 201
+ SG+ +M + D F + + + + VGD+MT PV + E L A
Sbjct: 59 LCSGASVLMANMAIDPDDRANAF------IRRCSWR-VGDVMTANPVTIEEEAPLARVAG 111
Query: 202 LLLETKYRRLPVV 214
L+ E +R+PV+
Sbjct: 112 LMQERGIKRIPVM 124
>gi|419609957|ref|ZP_14144033.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli H8]
gi|380591180|gb|EIB12170.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli H8]
Length = 484
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 59/122 (48%), Gaps = 33/122 (27%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P +V EALEI+ E RI+G PVID D KL+G++++ DL R +N
Sbjct: 99 VGPKASVAEALEIMAEYRISGVPVIDSDRKLIGILTNRDL----------RFENDY---- 144
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVR-ETTNLEDAARLLLETKYRRLPVVDA 216
+V ++MT AP++ + L+DA ++ + K +LP+VD
Sbjct: 145 ------------------SNLVENVMTKAPLITAPKGCTLDDAEKIFSKNKVEKLPIVDE 186
Query: 217 DG 218
G
Sbjct: 187 QG 188
>gi|225849786|ref|YP_002730020.1| inosine-5'-monophosphate dehydrogenase [Persephonella marina EX-H1]
gi|225645461|gb|ACO03647.1| inosine-5'-monophosphate dehydrogenase [Persephonella marina EX-H1]
Length = 489
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 60/122 (49%), Gaps = 31/122 (25%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
+ P TV EALEI+ +I+G PV+D + KL+G++++ DL
Sbjct: 102 IGPDQTVKEALEIMATYKISGVPVVDSENKLIGILTNRDL-------------------- 141
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVV-VRETTNLEDAARLLLETKYRRLPVVDA 216
+ L K K V MT AP++ +E T+LE+A +L + K +LPVVD
Sbjct: 142 ----------RFLHKKDYRKPVSQFMTKAPLITAKEGTSLEEAMDILQKHKVEKLPVVDD 191
Query: 217 DG 218
+G
Sbjct: 192 EG 193
Score = 38.5 bits (88), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 138
V FMT K L K T+++EA++IL + ++ PV+DD+ L GL++ D++
Sbjct: 153 VSQFMT-KAPLITAKEGTSLEEAMDILQKHKVEKLPVVDDEGHLKGLITIKDIV 205
>gi|419586536|ref|ZP_14122497.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli 67-8]
gi|380566098|gb|EIA88790.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli 67-8]
Length = 484
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 59/122 (48%), Gaps = 33/122 (27%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P +V EALEI+ E RI+G PVID D KL+G++++ DL R +N
Sbjct: 99 VGPKASVAEALEIMAEYRISGVPVIDSDRKLIGILTNRDL----------RFENDY---- 144
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVR-ETTNLEDAARLLLETKYRRLPVVDA 216
+V ++MT AP++ + L+DA ++ + K +LP+VD
Sbjct: 145 ------------------SNLVENVMTKAPLITAPKGCTLDDAEKIFSKNKVEKLPIVDE 186
Query: 217 DG 218
G
Sbjct: 187 QG 188
>gi|452209080|ref|YP_007489194.1| CBS domain protein [Methanosarcina mazei Tuc01]
gi|452098982|gb|AGF95922.1| CBS domain protein [Methanosarcina mazei Tuc01]
Length = 154
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 68/121 (56%), Gaps = 5/121 (4%)
Query: 99 KPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRA-DNSMFPEV 157
KP TV EA +IL E I+G PV++D KLVG+VS+ DLL L I G S F +
Sbjct: 15 KPENTVREAAKILKENNISGAPVLEDG-KLVGIVSEADLLELLVIPEKGNLWLPSPFEII 73
Query: 158 DSTWK---TFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVV 214
+ + ++ E +K+LS + ++MT + + ++E+A+ L++ + RLPV+
Sbjct: 74 EVPIRELLSWEETKKMLSDVGSTKLEEMMTKSVHTISSEASVEEASELMVRHRINRLPVI 133
Query: 215 D 215
+
Sbjct: 134 E 134
>gi|92117451|ref|YP_577180.1| signal-transduction protein [Nitrobacter hamburgensis X14]
gi|91800345|gb|ABE62720.1| putative signal-transduction protein with CBS domains [Nitrobacter
hamburgensis X14]
Length = 242
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 61/125 (48%), Gaps = 15/125 (12%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P TT+ +A ++++ I+G PVI+ KLVG++S+ D + I R
Sbjct: 14 VNPDTTIVDAANTMLKQHISGLPVINAAGKLVGIISEGDFIRRAEIGTQRRR-------- 65
Query: 158 DSTWKTF-----NEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLP 212
+ W F + + + G+ VG++MTP P V E T LED + + +RLP
Sbjct: 66 -ARWLKFLLGAGRDASDFVHE-QGRKVGEIMTPNPCTVSEDTLLEDIVTTMEKNSIKRLP 123
Query: 213 VVDAD 217
V+ D
Sbjct: 124 VMRGD 128
>gi|424918521|ref|ZP_18341885.1| CBS-domain-containing membrane protein [Rhizobium leguminosarum bv.
trifolii WSM597]
gi|392854697|gb|EJB07218.1| CBS-domain-containing membrane protein [Rhizobium leguminosarum bv.
trifolii WSM597]
Length = 226
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 74/134 (55%), Gaps = 14/134 (10%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGS 146
D MTT + ++PT +V A+ ++++ ++G PV+DD ++ G++++ DLL I +
Sbjct: 5 DIMTTS--VVSIRPTVSVRHAVSVMMQANVSGLPVVDDGGRVCGMLTEGDLLLRREIRAT 62
Query: 147 GRADNS--MFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
R+ + + E+D +++ + TNG V D+M+P +V + + D A L
Sbjct: 63 TRSSRAGEIISEID--------LERYIC-TNGWSVADVMSPDVIVATPDSEVSDIAESLQ 113
Query: 205 ETKYRRLPVVDADG 218
+ +RLP+V+ DG
Sbjct: 114 AHRIKRLPIVE-DG 126
>gi|384532132|ref|YP_005717736.1| putative signal transduction protein [Sinorhizobium meliloti
BL225C]
gi|384541151|ref|YP_005725234.1| hypothetical protein SM11_pC1352 [Sinorhizobium meliloti SM11]
gi|333814308|gb|AEG06976.1| putative signal transduction protein with CBS domains
[Sinorhizobium meliloti BL225C]
gi|336036494|gb|AEH82425.1| conserved hypothetical protein [Sinorhizobium meliloti SM11]
Length = 223
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 74/135 (54%), Gaps = 18/135 (13%)
Query: 85 VGDFMTTKEELHVVK--PTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS 142
V D MTTK VVK P +V +A +++ + ++G PV+DDD +L+G++S+ DL+
Sbjct: 3 VKDVMTTK----VVKLSPDNSVRQAAKLMFDHHVSGVPVVDDDGRLLGVISEGDLIRRTE 58
Query: 143 I-SGSG--RADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDA 199
+ SG+ AD ++ P+ + + + + + VGD+MT PV + E L
Sbjct: 59 LCSGASVLMADMAIDPD--------DRANAFIRRCSWR-VGDVMTANPVTIEEEAPLARV 109
Query: 200 ARLLLETKYRRLPVV 214
A L+ E +R+PV+
Sbjct: 110 AGLMQERGIKRIPVM 124
>gi|21226577|ref|NP_632499.1| inosine-5'-monophosphate dehydrogenase [Methanosarcina mazei Go1]
gi|20904852|gb|AAM30171.1| putative inosine-5'-monophosphate dehydrogenase [Methanosarcina
mazei Go1]
Length = 169
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 68/121 (56%), Gaps = 5/121 (4%)
Query: 99 KPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRA-DNSMFPEV 157
KP TV EA +IL E I+G PV++D KLVG+VS+ DLL L I G S F +
Sbjct: 30 KPENTVREAAKILKENNISGAPVLEDG-KLVGIVSEADLLELLVIPEKGNLWLPSPFEII 88
Query: 158 DSTWK---TFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVV 214
+ + ++ E +K+LS + ++MT + + ++E+A+ L++ + RLPV+
Sbjct: 89 EVPIRELLSWEETKKMLSDVGSTKLEEMMTKSVHTISSEASVEEASELMVRHRINRLPVI 148
Query: 215 D 215
+
Sbjct: 149 E 149
>gi|320160660|ref|YP_004173884.1| hypothetical protein ANT_12500 [Anaerolinea thermophila UNI-1]
gi|319994513|dbj|BAJ63284.1| hypothetical protein ANT_12500 [Anaerolinea thermophila UNI-1]
Length = 275
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/131 (35%), Positives = 69/131 (52%), Gaps = 20/131 (15%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V ++M+ EE+ VV+P T++ EA ++ KRI PV+++D +LVGLV+ DL++ D
Sbjct: 143 VAEYMS--EEVVVVEPDTSLLEAHRLMGTKRIRALPVLEED-RLVGLVTRTDLVSSDPSR 199
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
R Q+L K + V +MT V V T L++AARLLL
Sbjct: 200 FISRKQ-----------------QELSLKILTQPVEGIMTRTLVTVSPQTTLKEAARLLL 242
Query: 205 ETKYRRLPVVD 215
E K LPVV+
Sbjct: 243 EKKIHSLPVVE 253
Score = 43.5 bits (101), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 62/134 (46%), Gaps = 30/134 (22%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
T+ D MT V P T + +A +++E +ITG PV++D +LVG+++ D+
Sbjct: 78 TIRDIMTVNP--ITVFPNTPMPKAARVMLENKITGLPVLNDQRELVGILTSSDIFRF--- 132
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
E+++ L +V + M+ VVV T+L +A RL+
Sbjct: 133 -------------------IIEELEEPL------VVAEYMSEEVVVVEPDTSLLEAHRLM 167
Query: 204 LETKYRRLPVVDAD 217
+ R LPV++ D
Sbjct: 168 GTKRIRALPVLEED 181
Score = 41.2 bits (95), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 61/122 (50%), Gaps = 21/122 (17%)
Query: 95 LHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMF 154
++ V P T + +A +L ++I PV+ KLVG+V+ LL RAD
Sbjct: 14 VYTVTPETFIVDARRLLDVRKIRHLPVVSAG-KLVGIVTRRGLL---------RAD---L 60
Query: 155 PEV-DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPV 213
P V D TW+ ++ + + + D+MT P+ V T + AAR++LE K LPV
Sbjct: 61 PAVSDETWEIAFDL-------HHQTIRDIMTVNPITVFPNTPMPKAARVMLENKITGLPV 113
Query: 214 VD 215
++
Sbjct: 114 LN 115
Score = 37.4 bits (85), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 30/43 (69%), Gaps = 1/43 (2%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLAL 140
V P TT+ EA +L+EK+I PV+++ KLVG++++ DL +
Sbjct: 228 VSPQTTLKEAARLLLEKKIHSLPVVENS-KLVGILTESDLFRM 269
>gi|387906284|ref|YP_006336621.1| Inosine-5'-monophosphate dehydrogenase [Burkholderia sp. KJ006]
gi|387581176|gb|AFJ89890.1| Inosine-5'-monophosphate dehydrogenase [Burkholderia sp. KJ006]
Length = 230
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 67/131 (51%), Gaps = 6/131 (4%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGS 146
D MTT + P V E ++LVE I+ PV D D KL+G++S+ DL+ I G+
Sbjct: 5 DVMTTP--VIFATPEMGVQETAKLLVEHSISAVPVADADGKLIGIISEGDLVRRVEI-GT 61
Query: 147 GRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLET 206
G S + E+ + + E+ K + + V DLM+ V V E T L + A LL
Sbjct: 62 GARRRSWWLELLA---SSRELASQYVKEHAQTVKDLMSINVVTVDEDTPLSEVAELLERY 118
Query: 207 KYRRLPVVDAD 217
+ +R+PVV D
Sbjct: 119 RIKRVPVVKND 129
>gi|290955610|ref|YP_003486792.1| hypothetical protein SCAB_10481 [Streptomyces scabiei 87.22]
gi|260645136|emb|CBG68222.1| hypothetical protein SCAB_10481 [Streptomyces scabiei 87.22]
Length = 244
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 65/136 (47%), Gaps = 11/136 (8%)
Query: 85 VGDFMTTKEELHVVKPT--TTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS 142
VG MTT VV+ T E +L RI+G PVIDDD K++G++S+ DL+ +
Sbjct: 6 VGSVMTTD----VVRAEYDTPFKEVARLLAGHRISGLPVIDDDEKVIGVISETDLMVRQA 61
Query: 143 ISGSGRAD-NSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAAR 201
+ FP T + K ++T G+ LMT PV V + +AAR
Sbjct: 62 RTPDPYGQPRHRFPFAVLTRAARRQAVKAEARTAGR----LMTEPPVTVHADDTIVEAAR 117
Query: 202 LLLETKYRRLPVVDAD 217
+ + RLPVVD +
Sbjct: 118 TMARHRVERLPVVDEE 133
>gi|433616661|ref|YP_007193456.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Sinorhizobium meliloti GR4]
gi|429554908|gb|AGA09857.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Sinorhizobium meliloti GR4]
Length = 223
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 71/133 (53%), Gaps = 14/133 (10%)
Query: 85 VGDFMTTKEELHVVK--PTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS 142
V D MTTK VVK P +V +A +++ + ++G PV+DDD +L+G++S+ DL+
Sbjct: 3 VKDVMTTK----VVKLSPDNSVRQAAKLMFDHHVSGVPVVDDDGRLLGVISEGDLIRRTE 58
Query: 143 I-SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAAR 201
+ SG+ M + D F + + + + VGD+MT PV + E L A
Sbjct: 59 LCSGASVLMAEMAIDPDDRANAF------IRRCSWR-VGDVMTANPVTIEEEAPLARVAG 111
Query: 202 LLLETKYRRLPVV 214
L+ E +R+PV+
Sbjct: 112 LMQERGIKRIPVM 124
>gi|375011247|ref|YP_004988235.1| hypothetical protein [Owenweeksia hongkongensis DSM 17368]
gi|359347171|gb|AEV31590.1| CBS domain-containing protein [Owenweeksia hongkongensis DSM 17368]
Length = 151
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 68/148 (45%), Gaps = 27/148 (18%)
Query: 70 TLTANSAAPS--SGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWK 127
+ A P S V DFMTTK + + T+ + ++IL+EKRI+G PV+D D
Sbjct: 4 SFQGQQAKPQTESQQVVVRDFMTTK--ITTFQVDQTMHDVIQILIEKRISGGPVVDVDNH 61
Query: 128 LVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAP 187
LVG++S+ D L ++ G K N S + G V + M
Sbjct: 62 LVGVISEGDCLK-QAVKG----------------KYLN------SPSLGATVSECMVTEV 98
Query: 188 VVVRETTNLEDAARLLLETKYRRLPVVD 215
V N+ DAA++ L + RR PVV+
Sbjct: 99 KTVSPNLNILDAAQMFLHLRLRRFPVVE 126
>gi|419760549|ref|ZP_14286824.1| inosine-5'-monophosphate dehydrogenase [Thermosipho africanus
H17ap60334]
gi|407514387|gb|EKF49214.1| inosine-5'-monophosphate dehydrogenase [Thermosipho africanus
H17ap60334]
Length = 467
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 72/165 (43%), Gaps = 51/165 (30%)
Query: 73 ANSAAPSSGVYTVGDFMTTKEELHVVK-----------------PTTTVDEALEILVEKR 115
A + A G+ + MT +E+ H VK P TV+EA +I+ E +
Sbjct: 54 AKAIAREGGIGIIHKNMTIEEQAHQVKIVKRTENGIIDDPVTILPNVTVEEADKIMAEYK 113
Query: 116 ITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTN 175
I G PV+D++ KL+GL+++ D+ +
Sbjct: 114 IGGLPVVDENNKLLGLITNRDI--------------------------------RFERNP 141
Query: 176 GKMVGDLMTPAP--VVVRETTNLEDAARLLLETKYRRLPVVDADG 218
+ V +LMTP V+ ++ ++E+A +L E K +LP+++ DG
Sbjct: 142 KRQVSELMTPKDKLVIAKKGISIEEARDILHENKIEKLPLINEDG 186
Score = 41.6 bits (96), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 34/53 (64%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL 137
V + MT K++L + K +++EA +IL E +I P+I++D L GL++ D+
Sbjct: 145 VSELMTPKDKLVIAKKGISIEEARDILHENKIEKLPLINEDGTLAGLITIKDI 197
>gi|325001432|ref|ZP_08122544.1| predicted signal-transduction protein containing cAMP-binding and
CBS domains [Pseudonocardia sp. P1]
Length = 282
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 61/134 (45%), Gaps = 27/134 (20%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D MT L V P +DEA E+L+ R T PV+DDD +L+G+VS+ DL+A
Sbjct: 164 VSDVMTDGG-LVAVPPGLALDEAAEVLLSYRYTAVPVVDDDDRLLGVVSEADLMA----- 217
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
T+ + S G M D+ T P L DA +LL
Sbjct: 218 ----------------GSTYGGRRTRASTVAGVMTYDVETVHP-----GDPLADAEQLLA 256
Query: 205 ETKYRRLPVVDADG 218
E +R +PVVD DG
Sbjct: 257 ERGFRVIPVVDDDG 270
>gi|221632888|ref|YP_002522110.1| hypothetical protein trd_0888 [Thermomicrobium roseum DSM 5159]
gi|221156067|gb|ACM05194.1| CBS domain protein/ACT domain protein [Thermomicrobium roseum DSM
5159]
Length = 162
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 58/122 (47%), Gaps = 34/122 (27%)
Query: 93 EELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNS 152
E + V+P TTV+E +L+ RITG PVID+ +++G+VS++DLLA
Sbjct: 17 ENVVTVRPNTTVEEVARLLMTHRITGVPVIDEAGRVLGIVSEFDLLA------------- 63
Query: 153 MFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLP 212
G G++MT + V E T E A L+++ + RR+P
Sbjct: 64 ---------------------KRGHTAGEIMTRDVIAVTEETPAEAIADLIVQQRVRRVP 102
Query: 213 VV 214
V+
Sbjct: 103 VL 104
>gi|376295146|ref|YP_005166376.1| hypothetical protein DND132_0355 [Desulfovibrio desulfuricans
ND132]
gi|323457707|gb|EGB13572.1| CBS domain containing membrane protein [Desulfovibrio desulfuricans
ND132]
Length = 149
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 67/131 (51%), Gaps = 9/131 (6%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGS 146
D MTT E + P T + A ++L+EK+I G PV+D D ++VG++ DL+A
Sbjct: 6 DIMTT--ECITLTPETDITAAAKVLLEKKINGAPVLDGD-QVVGVLCQSDLVA----QQK 58
Query: 147 GRADNSMFPEVDST--WKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
S F +D + +E+ + ++K VGD MT AP V T +ED A ++
Sbjct: 59 KVTLPSFFTLLDGVIPLSSHDELDREMTKIAALKVGDAMTAAPTFVTPETTIEDVATMMA 118
Query: 205 ETKYRRLPVVD 215
K LPV++
Sbjct: 119 NEKLYTLPVIE 129
>gi|147678859|ref|YP_001213074.1| CBS domain-containing protein [Pelotomaculum thermopropionicum SI]
gi|146274956|dbj|BAF60705.1| FOG: CBS domain [Pelotomaculum thermopropionicum SI]
Length = 159
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 74/141 (52%), Gaps = 22/141 (15%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TV D MT ++++ +K T V + L + K+ITG PV+D+ +LVG+++ D+L
Sbjct: 2 TVKDLMT--KDVYTIKDTDKVIDLLRLFERKKITGAPVVDNCNRLVGIITVGDIL----- 54
Query: 144 SGSGRA-------DNSMFPEVDSTWKTFN-EVQKLLSKTNGKMVGDLMTPAPVVVRETTN 195
GR D + V T N E+ +L GK+V +LMT + V E T
Sbjct: 55 ---GRIYKPVPLFDIMYYVAVLDTDAIVNGEIYDVL----GKLVSELMTRKVITVSEDTE 107
Query: 196 LEDAARLLLETKYRRLPVVDA 216
D A+++ ++++LPVVD+
Sbjct: 108 FADVAKIMSRHRFKKLPVVDS 128
>gi|365891727|ref|ZP_09430113.1| conserved hypothetical protein [Bradyrhizobium sp. STM 3809]
gi|365332295|emb|CCE02644.1| conserved hypothetical protein [Bradyrhizobium sp. STM 3809]
Length = 242
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 62/120 (51%), Gaps = 5/120 (4%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P T++ +A I++++ I+G PV+D KLVG+VS+ D + I G+GR +
Sbjct: 14 VTPDTSIVDAANIMLQRHISGLPVVDASGKLVGVVSEGDFIRRTEI-GTGRKRGRWLRFI 72
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
K+ + +G+ V ++MT +P+ + + L + ++ +RLPVV D
Sbjct: 73 LGPGKSAAD----FVHEHGRKVAEVMTKSPLTITQDAALAEIVEIMERNHVKRLPVVKGD 128
>gi|310659366|ref|YP_003937087.1| CBS domain containing protein [[Clostridium] sticklandii]
gi|308826144|emb|CBH22182.1| CBS domain containing protein [[Clostridium] sticklandii]
Length = 150
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 68/122 (55%), Gaps = 10/122 (8%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRA----DNSM 153
V + +V++A+++L+E ITG PV+D+ ++G++++ DL+ R D+ +
Sbjct: 14 VSKSDSVEKAIKLLLEHNITGLPVVDEANHVIGIITEGDLMYRGGEIKPPRYLAIFDSYI 73
Query: 154 FPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPV 213
F +D+ K +K L K G V D+MT +V+ ++ DAA L+ + K RLPV
Sbjct: 74 F--IDNPSK----FEKQLKKMTGMFVEDVMTTPVIVIEAEQSVPDAANLMTKHKVNRLPV 127
Query: 214 VD 215
++
Sbjct: 128 IE 129
>gi|156742804|ref|YP_001432933.1| hypothetical protein Rcas_2844 [Roseiflexus castenholzii DSM 13941]
gi|156234132|gb|ABU58915.1| CBS domain containing protein [Roseiflexus castenholzii DSM 13941]
Length = 428
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 77/144 (53%), Gaps = 9/144 (6%)
Query: 72 TANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGL 131
T+ + P TV D M+ ++ V+P T + +E+L+++ + PV+D + ++VG+
Sbjct: 108 TSRAVGPFPAHLTVADIMS--RQVVSVRPDTPIAVIVELLIDRALRSAPVVDAENRVVGI 165
Query: 132 VSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVR 191
++D DLL G+ ++ E+ S + V+ L + + DLMTP PV +
Sbjct: 166 ITDGDLLT----RGATELPLALQREL-SLAERAAAVEILAERPH--TAADLMTPDPVTLP 218
Query: 192 ETTNLEDAARLLLETKYRRLPVVD 215
TT L +AA ++ + +R+PVVD
Sbjct: 219 MTTPLAEAAAIMADRGLKRIPVVD 242
Score = 45.1 bits (105), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 56/129 (43%), Gaps = 20/129 (15%)
Query: 83 YTVGDFMTTKEELHVVKPTTT-VDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALD 141
+T D MT V P TT + EA I+ ++ + PV+D+ +LVG+VS YDLL+
Sbjct: 204 HTAADLMTPDP---VTLPMTTPLAEAAAIMADRGLKRIPVVDEQHRLVGMVSRYDLLSTV 260
Query: 142 SISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAAR 201
+ R + P S + VGD+M VR T L +
Sbjct: 261 AEGLRQRPAEPVVP----------------SGGAPQTVGDIMMTGIPTVRPDTPLAETLD 304
Query: 202 LLLETKYRR 210
LLET RR
Sbjct: 305 HLLETDKRR 313
Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 70/149 (46%), Gaps = 13/149 (8%)
Query: 73 ANSAAPSSGV-YTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGL 131
A PS G TVGD M T + V+P T + E L+ L+E V+D+ +VG+
Sbjct: 269 AEPVVPSGGAPQTVGDIMMTG--IPTVRPDTPLAETLDHLLETDKRRVVVVDEHHHVVGI 326
Query: 132 VSDYDLL---ALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPV 188
+SD D+L A SG+ RA + F L G+ D+MT V
Sbjct: 327 ISDGDVLRRAAKRVRSGALRALAAWF-------GGGARPPGLEVAAEGRTAADVMTSPVV 379
Query: 189 VVRETTNLEDAARLLLETKYRRLPVVDAD 217
+ + +A RL++ K +R+PVVDAD
Sbjct: 380 TLPADAPITEAVRLMMTHKIKRIPVVDAD 408
>gi|308274761|emb|CBX31360.1| hypothetical protein N47_E48720 [uncultured Desulfobacterium sp.]
Length = 170
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 69/136 (50%), Gaps = 9/136 (6%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D M T ++ V P T V +A +IL+E I G PV+D + KL G++ D+++
Sbjct: 21 VKDIMKT--DVITVMPETEVIQAAKILLENHINGVPVVDKNGKLAGILCQSDIIS----Q 74
Query: 145 GSGRADNSMFPEVDS--TWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARL 202
S+F +D + + ++K + K V M+ PV V+ T++E A L
Sbjct: 75 QKKFPVPSLFAFLDGFISIPSMKHIEKEVQKIAAVTVEHAMSVNPVTVKSDTSIEAVAAL 134
Query: 203 LLETKYRRLPVVDADG 218
+++ + LPVVD DG
Sbjct: 135 MVDNNFHTLPVVD-DG 149
>gi|217077960|ref|YP_002335678.1| inosine-5'-monophosphate dehydrogenase [Thermosipho africanus
TCF52B]
gi|217037815|gb|ACJ76337.1| inosine-5'-monophosphate dehydrogenase [Thermosipho africanus
TCF52B]
Length = 483
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 72/165 (43%), Gaps = 51/165 (30%)
Query: 73 ANSAAPSSGVYTVGDFMTTKEELHVVK-----------------PTTTVDEALEILVEKR 115
A + A G+ + MT +E+ H VK P TV+EA +I+ E +
Sbjct: 54 AKAIAREGGIGIIHKNMTIEEQAHQVKIVKRTENGIIDDPVTILPNVTVEEADKIMAEYK 113
Query: 116 ITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTN 175
I G PV+D++ KL+GL+++ D+ +
Sbjct: 114 IGGLPVVDENNKLLGLITNRDI--------------------------------RFERNP 141
Query: 176 GKMVGDLMTPAP--VVVRETTNLEDAARLLLETKYRRLPVVDADG 218
+ V +LMTP V+ ++ ++E+A +L E K +LP+++ DG
Sbjct: 142 KRQVSELMTPKDKLVIAKKGISIEEARDILHENKIEKLPLINEDG 186
Score = 41.2 bits (95), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 34/53 (64%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL 137
V + MT K++L + K +++EA +IL E +I P+I++D L GL++ D+
Sbjct: 145 VSELMTPKDKLVIAKKGISIEEARDILHENKIEKLPLINEDGTLAGLITIKDI 197
>gi|398822156|ref|ZP_10580542.1| putative signal-transduction protein containing cAMP-binding and
CBS domain containing protein [Bradyrhizobium sp. YR681]
gi|398227150|gb|EJN13386.1| putative signal-transduction protein containing cAMP-binding and
CBS domain containing protein [Bradyrhizobium sp. YR681]
Length = 242
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 63/120 (52%), Gaps = 5/120 (4%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P T++ EA I++++ ++G V++D KLVG+VS+ D + I G+GR +
Sbjct: 14 VTPDTSIVEAANIMLKRHVSGLTVVNDTGKLVGVVSEGDFIRRSEI-GTGRKRGRWLRFI 72
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
K+ ++ +G+ V ++MT +PV + E T L + + +RLPVV D
Sbjct: 73 LGPGKSASD----FVHEHGRKVSEVMTASPVTITEDTALAEIVDHMERNNVKRLPVVRGD 128
>gi|146342162|ref|YP_001207210.1| hypothetical protein BRADO5312 [Bradyrhizobium sp. ORS 278]
gi|146194968|emb|CAL78993.1| conserved hypothetical protein with CBS domain [Bradyrhizobium sp.
ORS 278]
Length = 242
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 63/120 (52%), Gaps = 5/120 (4%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P T++ +A I++++ ++G PV+D KLVG+VS+ D + I G+GR +
Sbjct: 14 VTPDTSIVDAANIMLQRHVSGLPVVDASGKLVGVVSEGDFIRRTEI-GTGRKRGRWLRFI 72
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
K+ + +G+ V ++MT +P+ + E L + ++ + +RLPVV D
Sbjct: 73 LGPGKSAAD----FVHEHGRKVSEVMTRSPLTITEDAALAEIVEIMEKNHVKRLPVVKGD 128
>gi|46580320|ref|YP_011128.1| hypothetical protein DVU1911 [Desulfovibrio vulgaris str.
Hildenborough]
gi|120602299|ref|YP_966699.1| hypothetical protein Dvul_1253 [Desulfovibrio vulgaris DP4]
gi|387153254|ref|YP_005702190.1| hypothetical protein Deval_1396 [Desulfovibrio vulgaris RCH1]
gi|46449737|gb|AAS96387.1| CBS domain protein [Desulfovibrio vulgaris str. Hildenborough]
gi|120562528|gb|ABM28272.1| CBS domain containing protein [Desulfovibrio vulgaris DP4]
gi|311233698|gb|ADP86552.1| CBS domain containing membrane protein [Desulfovibrio vulgaris
RCH1]
Length = 150
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 65/121 (53%), Gaps = 8/121 (6%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRAD-NSMFPE 156
V P T + +A ILVE++ G PV+DD +LVG++ DL I+ + + S F
Sbjct: 15 VAPDTEIAKAARILVERKFNGLPVVDDSGRLVGVICQSDL-----ITQHKKLNIPSFFTV 69
Query: 157 VDS--TWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVV 214
+D + +E+ + + + + +V MT PV V T +++ A L++++K LPVV
Sbjct: 70 LDGFIPLTSMSELDEQMRRISATIVKHAMTADPVTVTPETAIDEIASLMVDSKLHTLPVV 129
Query: 215 D 215
+
Sbjct: 130 E 130
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 25/38 (65%)
Query: 181 DLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADG 218
D+MT +PV V T + AAR+L+E K+ LPVVD G
Sbjct: 6 DIMTASPVTVAPDTEIAKAARILVERKFNGLPVVDDSG 43
>gi|344340335|ref|ZP_08771261.1| putative signal transduction protein with CBS domains [Thiocapsa
marina 5811]
gi|343799993|gb|EGV17941.1| putative signal transduction protein with CBS domains [Thiocapsa
marina 5811]
Length = 154
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 62/123 (50%), Gaps = 16/123 (13%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL-----ALDSISGSGRADNS 152
V P T + E ++ R G PV+D D KLVG++++ DLL LD + G
Sbjct: 14 VNPDTRIVEVASLMCLYRFHGLPVVDGDEKLVGIIAERDLLHSLFPKLDKLIAEGMHS-- 71
Query: 153 MFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLP 212
++D ++E+ +L ++ +LMTP PV V ++ AA +++ +RR+P
Sbjct: 72 --VDLDKEMARYSEILELKTE-------ELMTPNPVTVDPEMHVLRAATVMVRHNFRRIP 122
Query: 213 VVD 215
V D
Sbjct: 123 VAD 125
>gi|21218726|ref|NP_624505.1| hypothetical protein SCO0169 [Streptomyces coelicolor A3(2)]
gi|5748631|emb|CAB53136.1| conserved hypothetical protein SCJ1.18 [Streptomyces coelicolor
A3(2)]
Length = 217
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 63/123 (51%), Gaps = 15/123 (12%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P + + +L + +++ PV++ + +++GLVS+ DLL +
Sbjct: 8 VGPEAPFKDIIALLDQWKVSALPVLEGEGRVIGLVSEADLLPKEEFR------------- 54
Query: 158 DSTWKTFNEVQKL--LSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVD 215
DS F ++++L L+K G D+MT V V L AAR++ + K +RLPVV+
Sbjct: 55 DSDPDRFTQMRRLTDLAKAGGLTAADVMTAPAVTVHPDATLAQAARIMAQRKVKRLPVVN 114
Query: 216 ADG 218
A+G
Sbjct: 115 AEG 117
>gi|114706239|ref|ZP_01439141.1| hypothetical protein FP2506_00605 [Fulvimarina pelagi HTCC2506]
gi|114538100|gb|EAU41222.1| hypothetical protein FP2506_00605 [Fulvimarina pelagi HTCC2506]
Length = 144
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 62/116 (53%), Gaps = 26/116 (22%)
Query: 100 PTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDS 159
P+ T+ E ++L EKRI +++D+ +L G+VS+ D++ + + G P+V +
Sbjct: 19 PSVTLAEVAQVLSEKRIGAIILVEDNGRLAGIVSERDIVRVVAARG---------PDVLT 69
Query: 160 TWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVD 215
++V + MTP V VRE ++++A RL+ E ++R LPVVD
Sbjct: 70 -----------------QLVKEAMTPKVVTVREDMSIDEAMRLMTEKRFRHLPVVD 108
Score = 37.0 bits (84), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 27/41 (65%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 138
V+ ++DEA+ ++ EKR PV+D+ +LVG VS D++
Sbjct: 83 VREDMSIDEAMRLMTEKRFRHLPVVDETEQLVGFVSIGDVV 123
>gi|150398194|ref|YP_001328661.1| signal-transduction protein [Sinorhizobium medicae WSM419]
gi|150029709|gb|ABR61826.1| putative signal-transduction protein with CBS domains
[Sinorhizobium medicae WSM419]
Length = 223
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 68/132 (51%), Gaps = 12/132 (9%)
Query: 85 VGDFMTTKEELHVVK--PTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS 142
V D MTTK VVK P +V +A +++ + ++G PV++DD +L+G++S+ DL+
Sbjct: 3 VKDVMTTK----VVKLSPDNSVRQAAKLMFDYHVSGVPVVNDDGRLLGVISEGDLIRRTE 58
Query: 143 ISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARL 202
+ + D T N + + + + VGD+MT PV + E L A L
Sbjct: 59 LCSGASVLMA-----DMTIDPVNRANAFIRRCSWR-VGDVMTADPVTIEEEAPLARVAGL 112
Query: 203 LLETKYRRLPVV 214
+ E +R+PV+
Sbjct: 113 MQERGIKRIPVM 124
>gi|158521214|ref|YP_001529084.1| CBS domain-containing protein [Desulfococcus oleovorans Hxd3]
gi|158510040|gb|ABW67007.1| CBS domain containing membrane protein [Desulfococcus oleovorans
Hxd3]
Length = 152
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 66/131 (50%), Gaps = 8/131 (6%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGS 146
D MT +E+ V P T + +A +L+E I G PV++ D +LVG++ DL+ +
Sbjct: 6 DIMT--KEVITVSPETDIAQATRLLLENHINGAPVVNADGELVGMLCQSDLI----VQQK 59
Query: 147 GRADNSMFPEVDS--TWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
S+F +D ++ + ++K + K V D M+ PV V +ED A L+
Sbjct: 60 KIPLPSIFTFLDGVFSFSSTKSLEKEMQKIAATTVADAMSTDPVSVTPDATVEDVASLMA 119
Query: 205 ETKYRRLPVVD 215
E + +PVV+
Sbjct: 120 EKHFHTIPVVE 130
>gi|357419743|ref|YP_004932735.1| hypothetical protein Tlie_0905 [Thermovirga lienii DSM 17291]
gi|355397209|gb|AER66638.1| CBS domain containing protein [Thermovirga lienii DSM 17291]
Length = 157
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 60/115 (52%), Gaps = 17/115 (14%)
Query: 106 EALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA------LDSISGSGRADNSMFPEVDS 159
+AL +L +R++G PV+ DDW LVG +S+ D+L L+ ++ S D+
Sbjct: 26 DALHVLYSQRLSGVPVVRDDWVLVGFLSEKDILQGAVPTYLEVLAQSTFLDDC------- 78
Query: 160 TWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVV 214
N +Q+L + K V DLMT PV V +L A L+L K +RLPVV
Sbjct: 79 ---EGNLLQRLCAMGKQK-VKDLMTKDPVYVTPEASLMTVADLMLRKKIKRLPVV 129
>gi|385209203|ref|ZP_10036071.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Burkholderia sp. Ch1-1]
gi|385181541|gb|EIF30817.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Burkholderia sp. Ch1-1]
Length = 229
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 58/119 (48%), Gaps = 5/119 (4%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P TV E I V+ I+G PV+D L G++S+ DLL I R +S
Sbjct: 14 VTPDMTVREVARIFVDNGISGAPVLDPQGHLAGMISEGDLLRRTEIGTDERKPSSWL--- 70
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDA 216
W +E + + KT+ V D+MTP V V+ T L + A +L + +R+PV A
Sbjct: 71 -DVWSASHEARDYI-KTHAVKVRDVMTPDVVTVQPDTPLGEVASILETRRIKRVPVTQA 127
>gi|118475093|ref|YP_891788.1| inosine 5'-monophosphate dehydrogenase [Campylobacter fetus subsp.
fetus 82-40]
gi|424820502|ref|ZP_18245540.1| inosine 5-monophosphate dehydrogenase [Campylobacter fetus subsp.
venerealis NCTC 10354]
gi|118414319|gb|ABK82739.1| inosine-5'-monophosphate dehydrogenase [Campylobacter fetus subsp.
fetus 82-40]
gi|342327281|gb|EGU23765.1| inosine 5-monophosphate dehydrogenase [Campylobacter fetus subsp.
venerealis NCTC 10354]
Length = 483
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 57/122 (46%), Gaps = 33/122 (27%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
+KP T+ EALE++ E RI+G PV+DDD L+G++++ DL R +N
Sbjct: 99 IKPNATIREALELMSEYRISGVPVVDDDNVLIGILTNRDL----------RFENDFT--- 145
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVR-ETTNLEDAARLLLETKYRRLPVVDA 216
K V D MT P++ + L+DA ++ K +LP+VD
Sbjct: 146 -------------------KQVSDAMTKPPLITAPKGCTLDDAEKIFSTNKVEKLPIVDE 186
Query: 217 DG 218
G
Sbjct: 187 SG 188
>gi|256811333|ref|YP_003128702.1| putative signal transduction protein with CBS domains
[Methanocaldococcus fervens AG86]
gi|256794533|gb|ACV25202.1| putative signal transduction protein with CBS domains
[Methanocaldococcus fervens AG86]
Length = 154
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 68/129 (52%), Gaps = 9/129 (6%)
Query: 97 VVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPE 156
VV +++ ++I E +I+G PV++ D KLVG++S+ D++ +I N + P
Sbjct: 12 VVYEDDDLEDVIKIFRENKISGAPVLNKDGKLVGIISESDIIK--TIVTHDEDLNLILPS 69
Query: 157 ----VDSTWKT---FNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYR 209
++ KT E + L K V D+MT +V + + DAA+L++E +
Sbjct: 70 PLDLIELPLKTALKIEEFMEDLKKALKTKVKDMMTKKVIVAKPDMTVNDAAKLMVEHNIK 129
Query: 210 RLPVVDADG 218
RLPVVD +G
Sbjct: 130 RLPVVDDEG 138
Score = 41.6 bits (96), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 35/54 (64%), Gaps = 2/54 (3%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 138
V D MT K + V KP TV++A +++VE I PV+DD+ L+G+V+ DL+
Sbjct: 99 VKDMMTKK--VIVAKPDMTVNDAAKLMVEHNIKRLPVVDDEGNLIGIVTRGDLI 150
>gi|423294552|ref|ZP_17272679.1| inosine-5'-monophosphate dehydrogenase [Bacteroides ovatus
CL03T12C18]
gi|392675743|gb|EIY69184.1| inosine-5'-monophosphate dehydrogenase [Bacteroides ovatus
CL03T12C18]
Length = 492
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 60/123 (48%), Gaps = 34/123 (27%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
+K +TV +AL+I+ E +I G PV+DD+ LVG+V++ DL R + M +
Sbjct: 104 IKRGSTVQDALDIMAEYKIGGIPVVDDEGYLVGIVTNRDL----------RFERDMAKHI 153
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAP--VVVRETTNLEDAARLLLETKYRRLPVVD 215
D +MTP V ++T+LE AA++L + K +LP+V
Sbjct: 154 DL----------------------VMTPKERLVTTNQSTDLESAAQILQKHKIEKLPIVG 191
Query: 216 ADG 218
DG
Sbjct: 192 MDG 194
Score = 36.6 bits (83), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 29/49 (59%)
Query: 89 MTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL 137
MT KE L +T ++ A +IL + +I P++ D KL+GLV+ D+
Sbjct: 157 MTPKERLVTTNQSTDLESAAQILQKHKIEKLPIVGMDGKLIGLVTYKDI 205
>gi|262408151|ref|ZP_06084698.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 2_1_22]
gi|294645123|ref|ZP_06722848.1| inosine-5'-monophosphate dehydrogenase [Bacteroides ovatus SD CC
2a]
gi|294809725|ref|ZP_06768412.1| inosine-5'-monophosphate dehydrogenase [Bacteroides xylanisolvens
SD CC 1b]
gi|345510152|ref|ZP_08789720.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. D1]
gi|229445482|gb|EEO51273.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. D1]
gi|262353703|gb|EEZ02796.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 2_1_22]
gi|292639547|gb|EFF57840.1| inosine-5'-monophosphate dehydrogenase [Bacteroides ovatus SD CC
2a]
gi|294443059|gb|EFG11839.1| inosine-5'-monophosphate dehydrogenase [Bacteroides xylanisolvens
SD CC 1b]
Length = 492
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 60/123 (48%), Gaps = 34/123 (27%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
+K +TV +AL+I+ E +I G PV+DD+ LVG+V++ DL R + M +
Sbjct: 104 IKRGSTVQDALDIMAEYKIGGIPVVDDEGYLVGIVTNRDL----------RFERDMAKHI 153
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAP--VVVRETTNLEDAARLLLETKYRRLPVVD 215
D +MTP V ++T+LE AA++L + K +LP+V
Sbjct: 154 DL----------------------VMTPKERLVTTNQSTDLESAAQILQKHKIEKLPIVG 191
Query: 216 ADG 218
DG
Sbjct: 192 MDG 194
Score = 36.6 bits (83), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 29/49 (59%)
Query: 89 MTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL 137
MT KE L +T ++ A +IL + +I P++ D KL+GLV+ D+
Sbjct: 157 MTPKERLVTTNQSTDLESAAQILQKHKIEKLPIVGMDGKLIGLVTYKDI 205
>gi|160882389|ref|ZP_02063392.1| hypothetical protein BACOVA_00338 [Bacteroides ovatus ATCC 8483]
gi|237719062|ref|ZP_04549543.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 2_2_4]
gi|293369501|ref|ZP_06616080.1| inosine-5'-monophosphate dehydrogenase [Bacteroides ovatus SD CMC
3f]
gi|299148145|ref|ZP_07041207.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 3_1_23]
gi|336415755|ref|ZP_08596094.1| inosine-5'-monophosphate dehydrogenase [Bacteroides ovatus
3_8_47FAA]
gi|423292371|ref|ZP_17270949.1| inosine-5'-monophosphate dehydrogenase [Bacteroides ovatus
CL02T12C04]
gi|156112202|gb|EDO13947.1| inosine-5'-monophosphate dehydrogenase [Bacteroides ovatus ATCC
8483]
gi|229451441|gb|EEO57232.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 2_2_4]
gi|292635386|gb|EFF53899.1| inosine-5'-monophosphate dehydrogenase [Bacteroides ovatus SD CMC
3f]
gi|298512906|gb|EFI36793.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 3_1_23]
gi|335940634|gb|EGN02501.1| inosine-5'-monophosphate dehydrogenase [Bacteroides ovatus
3_8_47FAA]
gi|392661780|gb|EIY55353.1| inosine-5'-monophosphate dehydrogenase [Bacteroides ovatus
CL02T12C04]
Length = 492
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 60/123 (48%), Gaps = 34/123 (27%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
+K +TV +AL+I+ E +I G PV+DD+ LVG+V++ DL R + M +
Sbjct: 104 IKRGSTVQDALDIMAEYKIGGIPVVDDEGYLVGIVTNRDL----------RFERDMAKHI 153
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAP--VVVRETTNLEDAARLLLETKYRRLPVVD 215
D +MTP V ++T+LE AA++L + K +LP+V
Sbjct: 154 DL----------------------VMTPKERLVTTNQSTDLESAAQILQKHKIEKLPIVG 191
Query: 216 ADG 218
DG
Sbjct: 192 MDG 194
Score = 36.6 bits (83), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 29/49 (59%)
Query: 89 MTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL 137
MT KE L +T ++ A +IL + +I P++ D KL+GLV+ D+
Sbjct: 157 MTPKERLVTTNQSTDLESAAQILQKHKIEKLPIVGMDGKLIGLVTYKDI 205
>gi|91783939|ref|YP_559145.1| hypothetical protein Bxe_A1873 [Burkholderia xenovorans LB400]
gi|91687893|gb|ABE31093.1| Conserved hypothetical protein [Burkholderia xenovorans LB400]
Length = 229
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 59/119 (49%), Gaps = 5/119 (4%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P TV E I V+ I+G PV+D + + G++S+ DLL I R +S
Sbjct: 14 VTPDMTVREVARIFVDNGISGAPVLDPEGHIAGMISEGDLLRRTEIGTDERKPSSWL--- 70
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDA 216
W +E + + KT+ V D+MTP V V+ T L + A +L + +R+PV A
Sbjct: 71 -DVWSASHEARDYI-KTHAVKVRDVMTPDVVTVQPDTPLGEVASILETRRIKRVPVTQA 127
>gi|334341079|ref|YP_004546059.1| hypothetical protein [Desulfotomaculum ruminis DSM 2154]
gi|334092433|gb|AEG60773.1| CBS domain containing protein [Desulfotomaculum ruminis DSM 2154]
Length = 158
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 69/125 (55%), Gaps = 4/125 (3%)
Query: 92 KEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADN 151
K++++ V+ V + L++ VEK+++G PV+ D L G++++ D+L S
Sbjct: 9 KKDIYTVREEEKVHDLLKVFVEKQVSGVPVVGKDHTLAGIITEADILRQIHQPPSFIDFV 68
Query: 152 SMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRL 211
+ F +DS ++ ++L++ V DLMT + V E T+L +++L K+++L
Sbjct: 69 NYFVVLDSDRVITGQIMEMLNRP----VKDLMTKDVITVDEETSLAKISQILSRRKFKKL 124
Query: 212 PVVDA 216
PVVD
Sbjct: 125 PVVDG 129
>gi|336403759|ref|ZP_08584468.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 1_1_30]
gi|423211953|ref|ZP_17198482.1| inosine-5'-monophosphate dehydrogenase [Bacteroides xylanisolvens
CL03T12C04]
gi|295088063|emb|CBK69586.1| inosine-5'-monophosphate dehydrogenase [Bacteroides xylanisolvens
XB1A]
gi|335945113|gb|EGN06929.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 1_1_30]
gi|392695317|gb|EIY88540.1| inosine-5'-monophosphate dehydrogenase [Bacteroides xylanisolvens
CL03T12C04]
Length = 492
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 60/123 (48%), Gaps = 34/123 (27%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
+K +TV +AL+I+ E +I G PV+DD+ LVG+V++ DL R + M +
Sbjct: 104 IKRGSTVQDALDIMAEYKIGGIPVVDDEGYLVGIVTNRDL----------RFERDMAKHI 153
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAP--VVVRETTNLEDAARLLLETKYRRLPVVD 215
D +MTP V ++T+LE AA++L + K +LP+V
Sbjct: 154 DL----------------------VMTPKERLVTTNQSTDLESAAQILQKHKIEKLPIVG 191
Query: 216 ADG 218
DG
Sbjct: 192 MDG 194
Score = 36.6 bits (83), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 29/49 (59%)
Query: 89 MTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL 137
MT KE L +T ++ A +IL + +I P++ D KL+GLV+ D+
Sbjct: 157 MTPKERLVTTNQSTDLESAAQILQKHKIEKLPIVGMDGKLIGLVTYKDI 205
>gi|383114100|ref|ZP_09934865.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. D2]
gi|313694192|gb|EFS31027.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. D2]
Length = 492
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 60/123 (48%), Gaps = 34/123 (27%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
+K +TV +AL+I+ E +I G PV+DD+ LVG+V++ DL R + M +
Sbjct: 104 IKRGSTVQDALDIMAEYKIGGIPVVDDEGYLVGIVTNRDL----------RFERDMAKHI 153
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAP--VVVRETTNLEDAARLLLETKYRRLPVVD 215
D +MTP V ++T+LE AA++L + K +LP+V
Sbjct: 154 DL----------------------VMTPKERLVTTNQSTDLESAAQILQKHKIEKLPIVG 191
Query: 216 ADG 218
DG
Sbjct: 192 MDG 194
Score = 36.6 bits (83), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 29/49 (59%)
Query: 89 MTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL 137
MT KE L +T ++ A +IL + +I P++ D KL+GLV+ D+
Sbjct: 157 MTPKERLVTTNQSTDLESAAQILQKHKIEKLPIVGMDGKLIGLVTYKDI 205
>gi|298480172|ref|ZP_06998370.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. D22]
gi|298273453|gb|EFI15016.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. D22]
Length = 492
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 60/123 (48%), Gaps = 34/123 (27%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
+K +TV +AL+I+ E +I G PV+DD+ LVG+V++ DL R + M +
Sbjct: 104 IKRGSTVQDALDIMAEYKIGGIPVVDDEGYLVGIVTNRDL----------RFERDMAKHI 153
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAP--VVVRETTNLEDAARLLLETKYRRLPVVD 215
D +MTP V ++T+LE AA++L + K +LP+V
Sbjct: 154 DL----------------------VMTPKERLVTTNQSTDLESAAQILQKHKIEKLPIVG 191
Query: 216 ADG 218
DG
Sbjct: 192 MDG 194
Score = 36.6 bits (83), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 29/49 (59%)
Query: 89 MTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL 137
MT KE L +T ++ A +IL + +I P++ D KL+GLV+ D+
Sbjct: 157 MTPKERLVTTNQSTDLESAAQILQKHKIEKLPIVGMDGKLIGLVTYKDI 205
>gi|302339945|ref|YP_003805151.1| CBS domain containing membrane protein [Spirochaeta smaragdinae DSM
11293]
gi|301637130|gb|ADK82557.1| CBS domain containing membrane protein [Spirochaeta smaragdinae DSM
11293]
Length = 413
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 65/134 (48%), Gaps = 11/134 (8%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D MT E+ P +V E ++ LV++ + PV D +VG+V+ DL+ +
Sbjct: 118 VRDVMT--EQPVTAHPDWSVRETIQRLVDEHLKALPVTDKQGNVVGMVTQGDLMKHGGMP 175
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+++ E STW + K+N + + ++MTP P + + +A L++
Sbjct: 176 IRLGLLSTLPKEERSTW---------MEKSNNRNLSEIMTPHPQTINADQKVSEALHLMV 226
Query: 205 ETKYRRLPVVDADG 218
+RLPVVD +G
Sbjct: 227 RKALKRLPVVDGNG 240
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 57/114 (50%), Gaps = 17/114 (14%)
Query: 106 EALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFN 165
EA++IL +K VID D LVGLV+D L+ + +D T
Sbjct: 297 EAIDILAQKAAQRAAVIDTDKHLVGLVTDSILMRV----------------IDKKTSTIL 340
Query: 166 EVQKLLSKTNGKM-VGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADG 218
+++ ++ + + +M V V E T++++A RL+ E +R+PVVDA+G
Sbjct: 341 PLRRFAARRAESLQLSQVMKREVVRVTEETSVDEAIRLMTEQGLKRIPVVDAEG 394
>gi|153872441|ref|ZP_02001333.1| acetoin utilization protein AcuB [Beggiatoa sp. PS]
gi|152071093|gb|EDN68667.1| acetoin utilization protein AcuB [Beggiatoa sp. PS]
Length = 155
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 66/131 (50%), Gaps = 21/131 (16%)
Query: 88 FMTTKE----ELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
MT KE EL+ +KP TV EA ++++ ++I PVID+ +L+GL+S D+LA SI
Sbjct: 1 MMTVKELMSRELYTLKPDDTVHEARQLMLSQQIRHIPVIDEQEQLIGLLSQRDVLA-ASI 59
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
S + E++S G + +MT V+ E T+L +A + +
Sbjct: 60 STLADLETQEREELES----------------GIPINKIMTTNVVIAEEDTSLLNATQFM 103
Query: 204 LETKYRRLPVV 214
L K LPV+
Sbjct: 104 LSQKQGCLPVL 114
>gi|255690566|ref|ZP_05414241.1| inosine-5'-monophosphate dehydrogenase [Bacteroides finegoldii DSM
17565]
gi|423301600|ref|ZP_17279623.1| inosine-5'-monophosphate dehydrogenase [Bacteroides finegoldii
CL09T03C10]
gi|260624027|gb|EEX46898.1| inosine-5'-monophosphate dehydrogenase [Bacteroides finegoldii DSM
17565]
gi|408471593|gb|EKJ90124.1| inosine-5'-monophosphate dehydrogenase [Bacteroides finegoldii
CL09T03C10]
Length = 492
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 60/123 (48%), Gaps = 34/123 (27%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
+K +TV +AL+I+ E +I G PV+DD+ LVG+V++ DL R + M +
Sbjct: 104 IKRGSTVQDALDIMAEYKIGGIPVVDDEGYLVGIVTNRDL----------RFERDMTKHI 153
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAP--VVVRETTNLEDAARLLLETKYRRLPVVD 215
D +MTP V ++T+LE AA++L + K +LP+V
Sbjct: 154 DL----------------------VMTPKEKLVTTNQSTDLESAAQILQKHKIEKLPIVG 191
Query: 216 ADG 218
DG
Sbjct: 192 MDG 194
Score = 37.0 bits (84), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 30/49 (61%)
Query: 89 MTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL 137
MT KE+L +T ++ A +IL + +I P++ D KL+GLV+ D+
Sbjct: 157 MTPKEKLVTTNQSTDLESAAQILQKHKIEKLPIVGMDGKLIGLVTYKDI 205
>gi|158522990|ref|YP_001530860.1| signal transduction protein [Desulfococcus oleovorans Hxd3]
gi|158511816|gb|ABW68783.1| putative signal transduction protein with CBS domains
[Desulfococcus oleovorans Hxd3]
Length = 423
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 65/127 (51%), Gaps = 6/127 (4%)
Query: 92 KEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADN 151
+ + H V P T V + L ++ + I V+D + L+GL+SD DLL + SG
Sbjct: 283 RRDTHTVSPDTPVADVLRLIGDNDIQRVAVVDAENNLLGLISDKDLLRCFAQKQSGIW-- 340
Query: 152 SMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRL 211
+ V S +K +E L+ G G +M + V+E +E+A L++E +RL
Sbjct: 341 GLLSRVGSAFK-HDEADTCLA---GATAGTVMNTELITVKEEMLIEEAIGLMVERGLKRL 396
Query: 212 PVVDADG 218
PVVDA+G
Sbjct: 397 PVVDAEG 403
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 54/121 (44%), Gaps = 9/121 (7%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V T +DE +L+ TG PV+D + VG+++ DL+ R
Sbjct: 129 VTSETPLDEVTRLLLSSIFTGVPVVDKKGRPVGVITQGDLI---------RKGGLPLRLG 179
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
+ ++ +LS+ G+ +MT V + E L +A L++ ++RLPV D +
Sbjct: 180 LLAESDQDRMKSVLSQMAGRQAEQVMTGPAVTIAEDRPLAEAVDLMISRNFKRLPVTDKE 239
Query: 218 G 218
G
Sbjct: 240 G 240
>gi|424887384|ref|ZP_18310989.1| CBS-domain-containing membrane protein [Rhizobium leguminosarum bv.
trifolii WSM2012]
gi|393175156|gb|EJC75199.1| CBS-domain-containing membrane protein [Rhizobium leguminosarum bv.
trifolii WSM2012]
Length = 225
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 74/132 (56%), Gaps = 10/132 (7%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGS 146
D MTTK + + P +V A+ ++++ R++G PV+DD ++ G+V++ DLL + +
Sbjct: 5 DIMTTK--VVSISPAVSVRHAVAMMLQNRVSGLPVVDDQGRVCGMVTEGDLLLRREVRLT 62
Query: 147 GRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLET 206
R + PE+ S ++++ + +NG V D+M+ +V R + + D A L
Sbjct: 63 PRPARA--PELISEI----DLERYIC-SNGWCVTDVMSQDVIVARPDSEVSDIAESLQAH 115
Query: 207 KYRRLPVVDADG 218
+ +RLP+V+ DG
Sbjct: 116 RIKRLPIVE-DG 126
>gi|288932855|ref|YP_003436915.1| CBS domain containing protein [Ferroglobus placidus DSM 10642]
gi|288895103|gb|ADC66640.1| CBS domain containing protein [Ferroglobus placidus DSM 10642]
Length = 259
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 62/134 (46%), Gaps = 35/134 (26%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D+MT +++ VVKP T+ E ++++ + GFPVIDD+ ++G +S D
Sbjct: 5 VKDYMT--KDVVVVKPDQTIKEVIDLIEKTGHDGFPVIDDNGIVIGYISSRD-------- 54
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
LL K V D+M+ +V RE +L DAAR++
Sbjct: 55 -------------------------LLRKNLDTKVKDVMSKKLIVAREHMDLRDAARVMF 89
Query: 205 ETKYRRLPVVDADG 218
T +LPV+D G
Sbjct: 90 RTGRSKLPVIDEKG 103
>gi|384217331|ref|YP_005608497.1| hypothetical protein BJ6T_36350 [Bradyrhizobium japonicum USDA 6]
gi|354956230|dbj|BAL08909.1| hypothetical protein BJ6T_36350 [Bradyrhizobium japonicum USDA 6]
Length = 242
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 61/124 (49%), Gaps = 13/124 (10%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P T++ EA I++++ ++G V+DD KLVG+VS+ D + I G+GR
Sbjct: 14 VTPHTSIVEAANIMLKRHVSGLTVVDDAGKLVGVVSEGDFVRRSEI-GTGRKRGR----- 67
Query: 158 DSTWKTF----NEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPV 213
W F E +G+ V ++MT + V + E T L + L+ +RLPV
Sbjct: 68 ---WLRFILGPGESASDFVHEHGRKVSEVMTTSVVTITEDTALAEIVDLMERNNVKRLPV 124
Query: 214 VDAD 217
V D
Sbjct: 125 VRGD 128
>gi|294775656|ref|ZP_06741164.1| inosine-5'-monophosphate dehydrogenase [Bacteroides vulgatus PC510]
gi|319642193|ref|ZP_07996853.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 3_1_40A]
gi|345518194|ref|ZP_08797649.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 4_3_47FAA]
gi|423314878|ref|ZP_17292810.1| inosine-5'-monophosphate dehydrogenase [Bacteroides vulgatus
CL09T03C04]
gi|254836462|gb|EET16771.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 4_3_47FAA]
gi|294450500|gb|EFG18992.1| inosine-5'-monophosphate dehydrogenase [Bacteroides vulgatus PC510]
gi|317386179|gb|EFV67098.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 3_1_40A]
gi|392681060|gb|EIY74422.1| inosine-5'-monophosphate dehydrogenase [Bacteroides vulgatus
CL09T03C04]
Length = 491
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 62/121 (51%), Gaps = 31/121 (25%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
+K +TV +AL ++ E RI G PV+DD+ LVG+V++ DL R + M +
Sbjct: 104 IKRGSTVRDALALMSEYRIGGIPVVDDERYLVGIVTNRDL----------RFEKDMDKRI 153
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
D ++++K N V ++T++E A+R+L E K +LPVVD +
Sbjct: 154 D----------EVMTKEN-----------IVTTNQSTDMEAASRILQEHKIEKLPVVDKE 192
Query: 218 G 218
G
Sbjct: 193 G 193
Score = 37.7 bits (86), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL 137
D + TKE + +T ++ A IL E +I PV+D + KLVGL++ D+
Sbjct: 154 DEVMTKENIVTTNQSTDMEAASRILQEHKIEKLPVVDKEGKLVGLITYKDI 204
>gi|150003021|ref|YP_001297765.1| inosine-5'-monophosphate dehydrogenase [Bacteroides vulgatus ATCC
8482]
gi|149931445|gb|ABR38143.1| inosine-5'-monophosphate dehydrogenase [Bacteroides vulgatus ATCC
8482]
Length = 482
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 62/121 (51%), Gaps = 31/121 (25%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
+K +TV +AL ++ E RI G PV+DD+ LVG+V++ DL R + M +
Sbjct: 95 IKRGSTVRDALALMSEYRIGGIPVVDDERYLVGIVTNRDL----------RFEKDMDKRI 144
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
D ++++K N V ++T++E A+R+L E K +LPVVD +
Sbjct: 145 D----------EVMTKEN-----------IVTTNQSTDMEAASRILQEHKIEKLPVVDKE 183
Query: 218 G 218
G
Sbjct: 184 G 184
Score = 38.1 bits (87), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL 137
D + TKE + +T ++ A IL E +I PV+D + KLVGL++ D+
Sbjct: 145 DEVMTKENIVTTNQSTDMEAASRILQEHKIEKLPVVDKEGKLVGLITYKDI 195
>gi|212690533|ref|ZP_03298661.1| hypothetical protein BACDOR_00015 [Bacteroides dorei DSM 17855]
gi|237708011|ref|ZP_04538492.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 9_1_42FAA]
gi|265754203|ref|ZP_06089392.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 3_1_33FAA]
gi|345515918|ref|ZP_08795415.1| inosine-5'-monophosphate dehydrogenase [Bacteroides dorei
5_1_36/D4]
gi|423229920|ref|ZP_17216325.1| inosine-5'-monophosphate dehydrogenase [Bacteroides dorei
CL02T00C15]
gi|423241573|ref|ZP_17222685.1| inosine-5'-monophosphate dehydrogenase [Bacteroides dorei
CL03T12C01]
gi|423247010|ref|ZP_17228061.1| inosine-5'-monophosphate dehydrogenase [Bacteroides dorei
CL02T12C06]
gi|212666882|gb|EEB27454.1| inosine-5'-monophosphate dehydrogenase [Bacteroides dorei DSM
17855]
gi|229436549|gb|EEO46626.1| inosine-5'-monophosphate dehydrogenase [Bacteroides dorei
5_1_36/D4]
gi|229457997|gb|EEO63718.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 9_1_42FAA]
gi|263234912|gb|EEZ20467.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 3_1_33FAA]
gi|392632711|gb|EIY26669.1| inosine-5'-monophosphate dehydrogenase [Bacteroides dorei
CL02T00C15]
gi|392633771|gb|EIY27709.1| inosine-5'-monophosphate dehydrogenase [Bacteroides dorei
CL02T12C06]
gi|392641159|gb|EIY34944.1| inosine-5'-monophosphate dehydrogenase [Bacteroides dorei
CL03T12C01]
Length = 491
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 62/121 (51%), Gaps = 31/121 (25%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
+K +TV +AL ++ E RI G PV+DD+ LVG+V++ DL R + M +
Sbjct: 104 IKRGSTVRDALALMSEYRIGGIPVVDDERYLVGIVTNRDL----------RFEKDMDKRI 153
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
D ++++K N V ++T++E A+++L E K +LPVVD D
Sbjct: 154 D----------EVMTKEN-----------IVTTNQSTDMEAASQILQEHKIEKLPVVDKD 192
Query: 218 G 218
G
Sbjct: 193 G 193
Score = 40.4 bits (93), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 31/51 (60%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL 137
D + TKE + +T ++ A +IL E +I PV+D D KLVGL++ D+
Sbjct: 154 DEVMTKENIVTTNQSTDMEAASQILQEHKIEKLPVVDKDGKLVGLITYKDI 204
>gi|336121852|ref|YP_004576627.1| signal transduction protein with CBS domains [Methanothermococcus
okinawensis IH1]
gi|334856373|gb|AEH06849.1| putative signal transduction protein with CBS domains
[Methanothermococcus okinawensis IH1]
Length = 278
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 59/133 (44%), Gaps = 30/133 (22%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V + MT E +K + E +E+ +EK + G PV+D D+KL+ +++ D++
Sbjct: 84 VKEIMTN--EAVCIKENALLKEVIELFIEKNVGGVPVVDKDYKLISTITERDIIRF---- 137
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
DN VD + K D MT PVV L+D AR +L
Sbjct: 138 ---LKDN-----VDKSEKVI----------------DYMTEKPVVATSGERLKDVARTML 173
Query: 205 ETKYRRLPVVDAD 217
+RRLPV+ D
Sbjct: 174 RNGFRRLPVISED 186
>gi|189461625|ref|ZP_03010410.1| hypothetical protein BACCOP_02284 [Bacteroides coprocola DSM 17136]
gi|189431655|gb|EDV00640.1| inosine-5'-monophosphate dehydrogenase [Bacteroides coprocola DSM
17136]
Length = 491
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 63/121 (52%), Gaps = 31/121 (25%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
+K +TV +AL+++ E +I G PV+DD+ LVG+V++ DL R + M +
Sbjct: 104 IKRGSTVKDALDLMAEYKIGGIPVVDDENYLVGIVTNRDL----------RFEKDMTKRI 153
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
D ++++K N ++T P T++E A+R+L E K +LPVV D
Sbjct: 154 D----------EVMTKEN------IVTTEP-----GTDMETASRILQENKIEKLPVVGKD 192
Query: 218 G 218
G
Sbjct: 193 G 193
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 30/51 (58%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL 137
D + TKE + +P T ++ A IL E +I PV+ D KLVGL++ D+
Sbjct: 154 DEVMTKENIVTTEPGTDMETASRILQENKIEKLPVVGKDGKLVGLITYKDI 204
>gi|302875785|ref|YP_003844418.1| inosine-5'-monophosphate dehydrogenase [Clostridium cellulovorans
743B]
gi|307689220|ref|ZP_07631666.1| inosine 5'-monophosphate dehydrogenase [Clostridium cellulovorans
743B]
gi|302578642|gb|ADL52654.1| inosine-5'-monophosphate dehydrogenase [Clostridium cellulovorans
743B]
Length = 485
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 62/117 (52%), Gaps = 33/117 (28%)
Query: 102 TTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTW 161
T+ EA +++ + RI+G P++D D KLVG+V++ D+L +D +S
Sbjct: 104 NTLKEADQLMAKYRISGVPIVDQDRKLVGIVTNRDMLFVDDLS----------------- 146
Query: 162 KTFNEVQKLLSKTNGKMVGDLMTPAPVVVR-ETTNLEDAARLLLETKYRRLPVVDAD 217
QK VGD+MT ++ E T++E+A ++L++ K +LP+VD +
Sbjct: 147 ------QK---------VGDVMTRENLITALEGTSIEEAKKILMKNKIEKLPLVDEN 188
>gi|378827333|ref|YP_005190065.1| inosine-5'-monophosphate dehydrogenase IMP dehydrogenase; IMPDH;
IMPD [Sinorhizobium fredii HH103]
gi|365180385|emb|CCE97240.1| Inosine-5'-monophosphate dehydrogenase IMP dehydrogenase; IMPDH;
IMPD [Sinorhizobium fredii HH103]
Length = 259
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 64/133 (48%), Gaps = 18/133 (13%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL---ALDSI 143
D M+ K + V P ++ A +++E RI+G PV D+ KLVG++S+ DLL L S
Sbjct: 46 DIMSKK--VISVSPEYSISHAARMMLENRISGLPVCDNSGKLVGILSEGDLLRRAELGSA 103
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
+G G+ + PE K + VGD+MT V V E L A ++
Sbjct: 104 AGRGQVSDRPEPEA-------------FIKGHSWRVGDVMTRPVVTVDEDVPLGRVAAIM 150
Query: 204 LETKYRRLPVVDA 216
+ +R+P V A
Sbjct: 151 AANEIKRIPAVRA 163
>gi|456352174|dbj|BAM86619.1| hypothetical protein S58_06050 [Agromonas oligotrophica S58]
Length = 239
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 55/124 (44%), Gaps = 13/124 (10%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P T V EA I++ I G PV+D +LVG+V+D D L + R
Sbjct: 4 VTPGTPVAEAARIMLRNHIGGLPVVDASGRLVGIVTDGDFLRRAELGTERR--------- 54
Query: 158 DSTWKTF----NEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPV 213
W + ++G+ VGD+M+ PV V +L + A + + +RLPV
Sbjct: 55 QGRWLDLLVGRGHIGADFVHSHGRTVGDIMSRPPVTVSTDASLAEIAEAMEKRNIKRLPV 114
Query: 214 VDAD 217
V D
Sbjct: 115 VSGD 118
>gi|411006741|ref|ZP_11383070.1| CBS domain containing membrane protein [Streptomyces globisporus
C-1027]
Length = 247
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 69/137 (50%), Gaps = 16/137 (11%)
Query: 83 YTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS 142
+TV D M+ V + + +E++ E +++ PV+ + ++VG+VS+ DLL ++
Sbjct: 46 HTVSDVMSHAPV--AVGSHASYRQVVELMAEAKVSALPVLAGEGRVVGVVSEADLLHKEA 103
Query: 143 ISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARL 202
GSG + ++D + K+ +V DLM+ V V L +AAR+
Sbjct: 104 FRGSGPPAAA---QLDEAF-----------KSAAVLVEDLMSSPAVTVHADAPLAEAARI 149
Query: 203 LLETKYRRLPVVDADGW 219
+ +RLPVV+++G
Sbjct: 150 MARKHVKRLPVVNSEGM 166
>gi|153809073|ref|ZP_01961741.1| hypothetical protein BACCAC_03381 [Bacteroides caccae ATCC 43185]
gi|423216746|ref|ZP_17203242.1| inosine-5'-monophosphate dehydrogenase [Bacteroides caccae
CL03T12C61]
gi|149128406|gb|EDM19625.1| inosine-5'-monophosphate dehydrogenase [Bacteroides caccae ATCC
43185]
gi|392629276|gb|EIY23283.1| inosine-5'-monophosphate dehydrogenase [Bacteroides caccae
CL03T12C61]
Length = 492
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 60/123 (48%), Gaps = 34/123 (27%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
+K +TV +AL+I+ E +I G PV+DD+ LVG+V++ DL R + M +
Sbjct: 104 IKRGSTVRDALDIMAEYKIGGIPVVDDEGYLVGIVTNRDL----------RFERDMAKHI 153
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAP--VVVRETTNLEDAARLLLETKYRRLPVVD 215
D +MTP V ++T+LE AA++L + K +LP+V
Sbjct: 154 DL----------------------VMTPKERLVTTNQSTDLESAAQILQKHKIEKLPIVG 191
Query: 216 ADG 218
DG
Sbjct: 192 MDG 194
Score = 36.6 bits (83), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 29/49 (59%)
Query: 89 MTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL 137
MT KE L +T ++ A +IL + +I P++ D KL+GLV+ D+
Sbjct: 157 MTPKERLVTTNQSTDLESAAQILQKHKIEKLPIVGMDGKLIGLVTYKDI 205
>gi|39937306|ref|NP_949582.1| CBS/transport-associated domain-containing protein
[Rhodopseudomonas palustris CGA009]
gi|192293086|ref|YP_001993691.1| signal transduction protein with CBS domains [Rhodopseudomonas
palustris TIE-1]
gi|39651164|emb|CAE29687.1| CBS domain:Transport-associated domain [Rhodopseudomonas palustris
CGA009]
gi|192286835|gb|ACF03216.1| putative signal transduction protein with CBS domains
[Rhodopseudomonas palustris TIE-1]
Length = 243
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 66/133 (49%), Gaps = 23/133 (17%)
Query: 94 ELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSM 153
+L + P ++ +A +++ ++G PV+DDD KL+G++S+ D + RA
Sbjct: 10 QLVTIGPEASIVDAANAMIDNHVSGLPVVDDDGKLIGIISEGDFIR--------RA---- 57
Query: 154 FPEVDSTWKTFNEVQKLLS---------KTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
E+ + K ++ LL +G+ VG++MT P + E T++E +L+
Sbjct: 58 --EIGTQRKRGRWLRMLLGPGTCAGDFVHEHGRKVGEVMTQHPYTISEDTSIETIVKLME 115
Query: 205 ETKYRRLPVVDAD 217
+ +R PV+ D
Sbjct: 116 KHHVKRFPVMRGD 128
>gi|86360152|ref|YP_472041.1| hypothetical protein RHE_PC00107 [Rhizobium etli CFN 42]
gi|86284254|gb|ABC93314.1| hypothetical conserved protein [Rhizobium etli CFN 42]
Length = 240
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 65/118 (55%), Gaps = 5/118 (4%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V + +V EA ++++ RI+G PV+ + LVG+VS+ D L +S + R + + +
Sbjct: 14 VTASASVAEAARLMLDNRISGLPVVGANGALVGIVSEGDFLRRSELS-TERKRSWLLEWL 72
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVD 215
S+ + E +T+G+ V ++MT + T +L DA RL+ + +RLPVV+
Sbjct: 73 TSSGRIAAE----YVRTHGRRVEEVMTAPVSAIAPTASLSDAVRLMERQEIKRLPVVE 126
>gi|220910106|ref|YP_002485417.1| hypothetical protein Cyan7425_4751 [Cyanothece sp. PCC 7425]
gi|219866717|gb|ACL47056.1| CBS domain containing membrane protein [Cyanothece sp. PCC 7425]
Length = 154
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 69/142 (48%), Gaps = 24/142 (16%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT VKPT ++ ++++ + R+ G PV+D+D K+VG++S+ DLL ++
Sbjct: 6 VQDFMTPNPI--TVKPTDSIATVVKLIEDHRVRGLPVVDEDGKVVGMISEGDLLVREA-- 61
Query: 145 GSGRADNSMFPEVDSTWKTF----------NEVQKLLSKTNGKMVGDLMTPAPVVVRETT 194
P + TF + L K+ +V D+MTP P T
Sbjct: 62 ----------PLQAPLYLTFLGSVIYFESPESFHQHLKKSLSMLVQDVMTPHPTTTTPET 111
Query: 195 NLEDAARLLLETKYRRLPVVDA 216
+ D A L++E RLPV+DA
Sbjct: 112 PIADVAHLMVEKHIDRLPVIDA 133
Score = 38.5 bits (88), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 26/41 (63%)
Query: 178 MVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADG 218
+V D MTP P+ V+ T ++ +L+ + + R LPVVD DG
Sbjct: 5 LVQDFMTPNPITVKPTDSIATVVKLIEDHRVRGLPVVDEDG 45
>gi|399911758|ref|ZP_10780072.1| hypothetical protein HKM-1_18687 [Halomonas sp. KM-1]
Length = 231
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 68/128 (53%), Gaps = 7/128 (5%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGS 146
D MT + + V P T V E +L+E I+ PV++DD K++G+VS+ DL+ +G+
Sbjct: 5 DVMTPR--VITVSPETDVREIARLLLEHNISALPVVEDDGKVLGIVSEGDLMRRVE-NGT 61
Query: 147 GRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLET 206
R + S + N + + K++ + ++MTP P+ + E L A+LL +
Sbjct: 62 ERRKSWWL---KSIFAGANNASEYI-KSHARKAHEIMTPNPITIDEDEPLHRVAKLLEKH 117
Query: 207 KYRRLPVV 214
+R+PVV
Sbjct: 118 HIKRVPVV 125
>gi|365899445|ref|ZP_09437351.1| conserved hypothetical protein [Bradyrhizobium sp. STM 3843]
gi|365419812|emb|CCE09893.1| conserved hypothetical protein [Bradyrhizobium sp. STM 3843]
Length = 249
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 56/120 (46%), Gaps = 5/120 (4%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P T + EA ++++ I PV+D KLVG+V+D D + I G+ R
Sbjct: 14 VTPGTPIVEAAKVMLRNHIGALPVVDTGGKLVGIVTDGDFIRRAEI-GTARKRGRWL--- 69
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
+ +++G+ V ++MTP PV V E L + L+ +RLPVV D
Sbjct: 70 -GLLVGRGRINADFIRSHGRAVCEIMTPDPVTVSENATLPEIVGLMERKHVKRLPVVSGD 128
>gi|398353803|ref|YP_006399267.1| hypothetical protein USDA257_c39660 [Sinorhizobium fredii USDA 257]
gi|390129129|gb|AFL52510.1| hypothetical protein USDA257_c39660 [Sinorhizobium fredii USDA 257]
Length = 263
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 60/122 (49%), Gaps = 16/122 (13%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL---ALDSISGSGRADNSMF 154
+ P ++ A +++E RI+G PV D+ KLVG++S+ DLL L S +G G+ +
Sbjct: 55 LSPEHSISHAARMMLENRISGLPVCDNSGKLVGILSEGDLLRRAELGSAAGRGQVSDRPE 114
Query: 155 PEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVV 214
PE K + VGD+MT V V E L A ++ + +R+PVV
Sbjct: 115 PEA-------------FIKGHSWRVGDVMTRDVVTVDEDVPLGRVAAIMAANEIKRIPVV 161
Query: 215 DA 216
A
Sbjct: 162 RA 163
>gi|212704299|ref|ZP_03312427.1| hypothetical protein DESPIG_02354 [Desulfovibrio piger ATCC 29098]
gi|212672261|gb|EEB32744.1| CBS domain protein [Desulfovibrio piger ATCC 29098]
Length = 218
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 65/121 (53%), Gaps = 17/121 (14%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
VKP T++ + +L E +I PV+DD ++VG++SD D + G+ +
Sbjct: 14 VKPDTSLLKCRNLLKEHQIRRLPVVDDQNRVVGIISDRD------VKGASPS-------- 59
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
+T +E+Q LL++ K D+MT PV ++ ++E AA L+++ K+ LPVV D
Sbjct: 60 KATALEVHEMQYLLAELKAK---DIMTAKPVTIKPWDSVEQAAILMMDKKFGGLPVVSED 116
Query: 218 G 218
Sbjct: 117 N 117
Score = 42.0 bits (97), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 35/54 (64%), Gaps = 2/54 (3%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLAL 140
D MT K +KP +V++A ++++K+ G PV+ +D KLVG+++D D+ L
Sbjct: 80 DIMTAKPV--TIKPWDSVEQAAILMMDKKFGGLPVVSEDNKLVGIITDQDIFKL 131
>gi|316935767|ref|YP_004110749.1| putative signal transduction protein [Rhodopseudomonas palustris
DX-1]
gi|315603481|gb|ADU46016.1| putative signal transduction protein with CBS domains
[Rhodopseudomonas palustris DX-1]
Length = 243
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 64/129 (49%), Gaps = 23/129 (17%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
+ P ++ +A +++ I+G PV+DDD KL+G++S+ D + RA E+
Sbjct: 14 IGPEASIVDAANAMIDNHISGLPVVDDDGKLIGIISEGDFIR--------RA------EI 59
Query: 158 DSTWKTFNEVQKLLS---------KTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKY 208
+ K ++ LL +G+ VG++MT P V E T++E +L+ +
Sbjct: 60 GTERKRGRWLRMLLGPGTCAGDFVHEHGRKVGEVMTRHPYTVTEETSIETIVKLMEKHHV 119
Query: 209 RRLPVVDAD 217
+R PV+ D
Sbjct: 120 KRFPVMRGD 128
>gi|168182191|ref|ZP_02616855.1| CBS domain protein [Clostridium botulinum Bf]
gi|170761474|ref|YP_001785527.1| hypothetical protein CLK_3378 [Clostridium botulinum A3 str. Loch
Maree]
gi|237793518|ref|YP_002861070.1| CBS domain-containing protein [Clostridium botulinum Ba4 str. 657]
gi|169408463|gb|ACA56874.1| CBS domain protein [Clostridium botulinum A3 str. Loch Maree]
gi|182674627|gb|EDT86588.1| CBS domain protein [Clostridium botulinum Bf]
gi|229262990|gb|ACQ54023.1| CBS domain protein [Clostridium botulinum Ba4 str. 657]
Length = 138
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 68/131 (51%), Gaps = 30/131 (22%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D MT + + V +V++A E++ E + P+ D++ K+VG+++D D+ AL S++
Sbjct: 3 VMDVMT--QNVATVNRNDSVEKAAELMSEHNVGSIPICDNN-KVVGVITDRDI-ALRSVA 58
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+DN++ VGD+MT PVV + ++ DAAR++
Sbjct: 59 KG--SDNNIK------------------------VGDIMTSNPVVANKDMDIHDAARIMS 92
Query: 205 ETKYRRLPVVD 215
E + RRLPV D
Sbjct: 93 ERQIRRLPVED 103
>gi|78357089|ref|YP_388538.1| hypothetical protein [Desulfovibrio alaskensis G20]
gi|78219494|gb|ABB38843.1| CBS domain containing membrane protein [Desulfovibrio alaskensis
G20]
Length = 150
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 63/121 (52%), Gaps = 10/121 (8%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADN--SMFP 155
V P + EA ++++E + G PV+DD KLVG++ DL+A + N S+F
Sbjct: 15 VAPDMDIIEATKLMLEYKFNGLPVVDDAGKLVGVLCQSDLVA------QQKKVNLPSLFT 68
Query: 156 EVDS--TWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPV 213
+D K+ +++ + K V D MT P V T L++ A L++++KY LPV
Sbjct: 69 ILDGFIPLKSLSDMDSEMRKVAATRVSDAMTDNPATVTPDTPLDEVATLMVDSKYYTLPV 128
Query: 214 V 214
V
Sbjct: 129 V 129
>gi|398356242|ref|YP_006529569.1| hypothetical protein USDA257_p01520 [Sinorhizobium fredii USDA 257]
gi|399995456|ref|YP_006575694.1| hypothetical protein SFHH103_04680 [Sinorhizobium fredii HH103]
gi|365182303|emb|CCE99153.1| hypothetical protein SFHH103_04680 [Sinorhizobium fredii HH103]
gi|390131489|gb|AFL54869.1| hypothetical protein USDA257_p01520 [Sinorhizobium fredii USDA 257]
Length = 218
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 64/134 (47%), Gaps = 18/134 (13%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL---ALDSI 143
D MT K + V P ++ A ++E RI+G PV DDD KLVG++S+ DLL L S
Sbjct: 5 DIMTKK--VLSVSPEHSISHAALTMLENRISGLPVCDDDRKLVGILSEGDLLRRAELGSA 62
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
+ + PE +KT+ VGD+MT V V E L ++
Sbjct: 63 AWPSAIRDKAEPEA-------------FTKTHSWRVGDVMTQRVVTVDEDAPLGRIGAIM 109
Query: 204 LETKYRRLPVVDAD 217
+ +R+PV+ A+
Sbjct: 110 AANQIKRIPVMRAE 123
>gi|338740852|ref|YP_004677814.1| hypothetical protein HYPMC_4039 [Hyphomicrobium sp. MC1]
gi|337761415|emb|CCB67248.1| conserved protein of unknown function [Hyphomicrobium sp. MC1]
Length = 242
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 73/133 (54%), Gaps = 17/133 (12%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGS 146
D MTTK + ++P T+ E ++ +++ RI+G PV+ +D KLVG+V++ D L
Sbjct: 5 DVMTTK--VISIRPDATLSEMIKKMLDHRISGLPVVSEDGKLVGVVTEGDCLR------- 55
Query: 147 GRADNSMFPEVD-STWKTFNEVQKLLS----KTNGKMVGDLMTPAPVVVRETTNLEDAAR 201
RA+ EV S W+ + L+ +T+G+ V ++MT P+ V T L +
Sbjct: 56 -RAETGT--EVKRSFWRDMLTGSETLANEYIRTHGRKVSEVMTRDPISVSPDTELSEVIH 112
Query: 202 LLLETKYRRLPVV 214
++ + + +R+PVV
Sbjct: 113 VMEKNRIKRVPVV 125
>gi|390953892|ref|YP_006417650.1| putative contains C-terminal CBS domains [Aequorivita sublithincola
DSM 14238]
gi|390419878|gb|AFL80635.1| putative transcriptional regulator, contains C-terminal CBS domains
[Aequorivita sublithincola DSM 14238]
Length = 153
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 72/143 (50%), Gaps = 25/143 (17%)
Query: 73 ANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLV 132
A + SS V D+MT L +P ++ E +E+L++KRI+G PV+++ +LVG++
Sbjct: 11 AKTQKGSSEKIKVSDYMT--RNLITFRPEQSIMEVMEVLLKKRISGGPVVNEKNELVGII 68
Query: 133 SDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRE 192
S+ D + S S R N +V K + K + +G+M
Sbjct: 69 SEGDCMKQLSDS---RYHNHPMEDV----KVEQHMIKNVDTIDGEM-------------- 107
Query: 193 TTNLEDAARLLLETKYRRLPVVD 215
N+ DAA + +E+K+RR P+++
Sbjct: 108 --NVLDAANMFVESKHRRFPILE 128
>gi|413961463|ref|ZP_11400691.1| putative signal transduction protein [Burkholderia sp. SJ98]
gi|413930335|gb|EKS69622.1| putative signal transduction protein [Burkholderia sp. SJ98]
Length = 212
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 58/105 (55%), Gaps = 4/105 (3%)
Query: 110 ILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQK 169
+LV+ RI+ PV+D D ++VG++S+ DLL + I R S + +D
Sbjct: 7 LLVQHRISAAPVVDQDERVVGMISEGDLLHREEIGTEKRNRRSWW--LDMLGSDGGAADY 64
Query: 170 LLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVV 214
+ K++ VG++MT P+ V+E T+L D A +L +R+PV+
Sbjct: 65 I--KSHAPTVGEIMTREPICVKEDTSLADIAAVLESHHIKRVPVL 107
>gi|377820772|ref|YP_004977143.1| putative signal transduction protein [Burkholderia sp. YI23]
gi|357935607|gb|AET89166.1| putative signal transduction protein with CBS domains [Burkholderia
sp. YI23]
Length = 230
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 72/131 (54%), Gaps = 11/131 (8%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL---ALDSI 143
D MTT + V TTV E +L++ RI+ PVID + +++G+VS+ DLL +D+
Sbjct: 5 DVMTTA--VVSVTSETTVHELALLLMQHRISAAPVIDANRRVIGMVSEGDLLHREEIDTE 62
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
GR S + E+ T + + K++ + VG++MT PV V E +L + A +L
Sbjct: 63 KTQGR--QSWWLEMLGTDRGAGD----YIKSHARTVGEIMTREPVCVNEDASLANIASVL 116
Query: 204 LETKYRRLPVV 214
+ +R+PV+
Sbjct: 117 ESRQIKRVPVL 127
>gi|315655202|ref|ZP_07908103.1| inosine-5'-monophosphate dehydrogenase [Mobiluncus curtisii ATCC
51333]
gi|315490457|gb|EFU80081.1| inosine-5'-monophosphate dehydrogenase [Mobiluncus curtisii ATCC
51333]
Length = 511
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 61/122 (50%), Gaps = 30/122 (24%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
+ P T+++ E+ + R++G PV+ DD++L+G++++ DL + +
Sbjct: 114 IGPNATIEQLDELCAKYRVSGLPVVTDDYELLGIITNRDLRFVPT--------------- 158
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVV-RETTNLEDAARLLLETKYRRLPVVDA 216
+ W T K V D MTP P++ R + E+A +LL E + +LP++D
Sbjct: 159 -AQWGT-------------KTVRDCMTPMPLITGRTGISREEAMKLLAENRIEKLPLIDE 204
Query: 217 DG 218
+G
Sbjct: 205 NG 206
>gi|393757933|ref|ZP_10346757.1| signal transduction protein [Alcaligenes faecalis subsp. faecalis
NCIB 8687]
gi|393165625|gb|EJC65674.1| signal transduction protein [Alcaligenes faecalis subsp. faecalis
NCIB 8687]
Length = 161
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 59/126 (46%), Gaps = 14/126 (11%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
+ P T V E IL+E RI G PV D + +L+G+V++ DL+ RA +
Sbjct: 14 IAPETAVAEIARILIEHRINGVPVTDTEGRLLGIVTEGDLV--------HRAADERLEPR 65
Query: 158 DSTWK------TFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRL 211
+S WK F KT G+ +MT + V ++ AARLL + + L
Sbjct: 66 ESVWKENFYRSVFRRRTPETDKTEGRTAAQVMTREVLTVAPEDHVTVAARLLADHNIKSL 125
Query: 212 PVVDAD 217
PV++ +
Sbjct: 126 PVIENE 131
>gi|20092371|ref|NP_618446.1| hypothetical protein MA3565 [Methanosarcina acetivorans C2A]
gi|19917622|gb|AAM06926.1| conserved hypothetical protein [Methanosarcina acetivorans C2A]
Length = 155
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 68/123 (55%), Gaps = 5/123 (4%)
Query: 99 KPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRA-DNSMFPEV 157
KP TV EA ++L E I+G PV++D +LVG+VS+ DLL L I G S F +
Sbjct: 16 KPDDTVREAAKLLKENNISGAPVLEDG-QLVGVVSEADLLELLVIPEKGNLWLPSPFEVI 74
Query: 158 DSTWK---TFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVV 214
+ + ++ E +K+LS V ++MT + ++E+A+ L++ + RLPV+
Sbjct: 75 EVPIRELLSWEETKKMLSDVGSTKVEEMMTKEVHTISSEASVEEASELMVRHRINRLPVM 134
Query: 215 DAD 217
+ D
Sbjct: 135 END 137
>gi|409437045|ref|ZP_11264193.1| conserved hypothetical protein [Rhizobium mesoamericanum STM3625]
gi|408751277|emb|CCM75349.1| conserved hypothetical protein [Rhizobium mesoamericanum STM3625]
Length = 240
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 66/121 (54%), Gaps = 6/121 (4%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
+ + TV EA E ++ RI+G PV+DDD LVG++++ D L ++ + R + + +
Sbjct: 14 IGASCTVLEAAETMLTNRISGLPVVDDDGVLVGMITEGDFLRRHELN-TERQRSWLQSWL 72
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
S K +E +++G+ V ++M VVV L DA RL+ +RLPV+ +D
Sbjct: 73 ASPGKIADE----YVRSHGRRVDEVMNARVVVVSPDAALSDAVRLMERNDIKRLPVI-SD 127
Query: 218 G 218
G
Sbjct: 128 G 128
>gi|298346656|ref|YP_003719343.1| IMP dehydrogenase [Mobiluncus curtisii ATCC 43063]
gi|315656882|ref|ZP_07909769.1| inosine-5'-monophosphate dehydrogenase [Mobiluncus curtisii subsp.
holmesii ATCC 35242]
gi|298236717|gb|ADI67849.1| IMP dehydrogenase [Mobiluncus curtisii ATCC 43063]
gi|315492837|gb|EFU82441.1| inosine-5'-monophosphate dehydrogenase [Mobiluncus curtisii subsp.
holmesii ATCC 35242]
Length = 511
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 61/122 (50%), Gaps = 30/122 (24%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
+ P T+++ E+ + R++G PV+ DD++L+G++++ DL + +
Sbjct: 114 IGPNATIEQLDELCAKYRVSGLPVVTDDYELLGIITNRDLRFVPT--------------- 158
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVV-RETTNLEDAARLLLETKYRRLPVVDA 216
+ W T K V D MTP P++ R + E+A +LL E + +LP++D
Sbjct: 159 -AQWGT-------------KTVRDCMTPMPLITGRTGISREEAMKLLAENRIEKLPLIDE 204
Query: 217 DG 218
+G
Sbjct: 205 NG 206
>gi|188996741|ref|YP_001930992.1| inosine-5'-monophosphate dehydrogenase [Sulfurihydrogenibium sp.
YO3AOP1]
gi|188931808|gb|ACD66438.1| inosine-5'-monophosphate dehydrogenase [Sulfurihydrogenibium sp.
YO3AOP1]
Length = 488
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 61/122 (50%), Gaps = 31/122 (25%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
++P +V EALEI+ +I+G PV+DD+ KLVG++++ DL
Sbjct: 101 IRPNQSVKEALEIMSIYKISGVPVVDDEKKLVGILTNRDL-------------------- 140
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVV-VRETTNLEDAARLLLETKYRRLPVVDA 216
+ + K K V + MT AP+V +E +L++A +L + K +LPVVD
Sbjct: 141 ----------RFIHKKDYEKPVYEFMTKAPLVTAKEGISLDEAIDILQKHKVEKLPVVDD 190
Query: 217 DG 218
G
Sbjct: 191 KG 192
Score = 38.1 bits (87), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 138
V +FMT K L K ++DEA++IL + ++ PV+DD +L GL++ D++
Sbjct: 152 VYEFMT-KAPLVTAKEGISLDEAIDILQKHKVEKLPVVDDKGRLKGLITIKDIV 204
>gi|421601459|ref|ZP_16044253.1| hypothetical protein BCCGELA001_25469 [Bradyrhizobium sp.
CCGE-LA001]
gi|404266431|gb|EJZ31317.1| hypothetical protein BCCGELA001_25469 [Bradyrhizobium sp.
CCGE-LA001]
Length = 242
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 63/120 (52%), Gaps = 5/120 (4%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P T++ EA I++++ ++G V+D+ +LVG+VS+ D + I G+GR +
Sbjct: 14 VTPDTSIVEAANIMLKRHVSGLTVVDETGRLVGIVSEGDFIRRSEI-GTGRKRGRWLRFI 72
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
K+ ++ +G+ V ++MT + V + E T L + L+ +RLPVV D
Sbjct: 73 LGPGKSASD----FVHEHGRRVSEVMTESVVTITEDTALAEIVDLMERNNVKRLPVVRGD 128
>gi|296132180|ref|YP_003639427.1| hypothetical protein TherJR_0656 [Thermincola potens JR]
gi|296030758|gb|ADG81526.1| CBS domain containing membrane protein [Thermincola potens JR]
Length = 150
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 65/132 (49%), Gaps = 12/132 (9%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA----LDS 142
D MT +E+ +P TV E +IL +K+I+G PV+D+ K+VG+V++ DLL L
Sbjct: 5 DIMT--KEVITARPEQTVREVAKILADKKISGVPVVDEAGKIVGIVTEADLLVQTQKLKV 62
Query: 143 ISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARL 202
S ++ + E ++ L K V D+MT V V E +ED A
Sbjct: 63 PSYVQLLGGIIY------LDSVKEFEEDLRKAVAVQVKDIMTTDVVTVEEDAEIEDIATT 116
Query: 203 LLETKYRRLPVV 214
+ + RLPVV
Sbjct: 117 MADEGINRLPVV 128
>gi|304389635|ref|ZP_07371597.1| inosine-5'-monophosphate dehydrogenase [Mobiluncus curtisii subsp.
curtisii ATCC 35241]
gi|304327188|gb|EFL94424.1| inosine-5'-monophosphate dehydrogenase [Mobiluncus curtisii subsp.
curtisii ATCC 35241]
Length = 511
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 61/122 (50%), Gaps = 30/122 (24%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
+ P T+++ E+ + R++G PV+ DD++L+G++++ DL + +
Sbjct: 114 IGPNATIEQLDELCAKYRVSGLPVVTDDYELLGIITNRDLRFVPT--------------- 158
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVV-RETTNLEDAARLLLETKYRRLPVVDA 216
+ W T K V D MTP P++ R + E+A +LL E + +LP++D
Sbjct: 159 -AQWGT-------------KTVRDCMTPMPLITGRTGISREEAMKLLAENRIEKLPLIDE 204
Query: 217 DG 218
+G
Sbjct: 205 NG 206
>gi|294672823|ref|YP_003573439.1| inosine-5'-monophosphate dehydrogenase [Prevotella ruminicola 23]
gi|294473021|gb|ADE82410.1| inosine-5'-monophosphate dehydrogenase [Prevotella ruminicola 23]
Length = 493
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 57/116 (49%), Gaps = 31/116 (26%)
Query: 102 TTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTW 161
+TV +ALEI+ E I G PV+DDD +LVG+V++ DL R D
Sbjct: 109 STVAQALEIMSEYHIGGIPVVDDDRRLVGIVTNRDLRF------ERRLDRP--------- 153
Query: 162 KTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
V++++SK N V + T+L AA++L E K +LPVVD D
Sbjct: 154 -----VEEIMSKEN-----------LVTTHQQTDLTAAAQILQENKIEKLPVVDKD 193
>gi|453053892|gb|EMF01351.1| hypothetical protein H340_07121 [Streptomyces mobaraensis NBRC
13819 = DSM 40847]
Length = 209
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 64/135 (47%), Gaps = 19/135 (14%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TVGD MT + V+ T E + +L E IT PV+D D + VG+VS+ DLLA
Sbjct: 6 TVGDLMT--HSVVRVQRGTLFTEIVHVLHEHDITAVPVVDADDRPVGVVSEADLLA---- 59
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
+ R D S+ V +K LMT V R ++ +AAR +
Sbjct: 60 KAARRVDPSLPAAVR-------------AKHEATTAEGLMTSPAVCARPDWSVVEAARTM 106
Query: 204 LETKYRRLPVVDADG 218
E +RLPVVDA+G
Sbjct: 107 EERHVKRLPVVDAEG 121
>gi|322420873|ref|YP_004200096.1| hypothetical protein GM18_3385 [Geobacter sp. M18]
gi|320127260|gb|ADW14820.1| CBS domain containing protein [Geobacter sp. M18]
Length = 217
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 61/120 (50%), Gaps = 17/120 (14%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
+ P +V EAL ++ EK+I PV+D KLVG+VSD DLL S + A
Sbjct: 14 IIPDISVTEALRLMGEKKIRRLPVVDRSGKLVGIVSDRDLLKASPSSATSLA-------- 65
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
W E+ LL+K V M + V E T LE+AAR++++ + LPV++ +
Sbjct: 66 --IW----EIHDLLAKLT---VEKCMAKEVITVPEDTPLEEAARIMVDRRIGGLPVMNGE 116
Score = 40.8 bits (94), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 56/114 (49%), Gaps = 9/114 (7%)
Query: 75 SAAPSSGVYTVGDFMT-------TKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWK 127
S+A S ++ + D + +E+ V T ++EA I+V++RI G PV++ + K
Sbjct: 59 SSATSLAIWEIHDLLAKLTVEKCMAKEVITVPEDTPLEEAARIMVDRRIGGLPVMNGE-K 117
Query: 128 LVGLVSDYDLL-ALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVG 180
LVG++++ DL L + G R + T +V K + + G +VG
Sbjct: 118 LVGIITESDLFKTLLELLGGRRQGVRITVSTTGAKGTLADVTKTIYEAGGNIVG 171
>gi|436842251|ref|YP_007326629.1| CBS domain containing membrane protein [Desulfovibrio
hydrothermalis AM13 = DSM 14728]
gi|432171157|emb|CCO24528.1| CBS domain containing membrane protein [Desulfovibrio
hydrothermalis AM13 = DSM 14728]
Length = 151
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 69/124 (55%), Gaps = 9/124 (7%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALD-SISGSGRADNSMFPE 156
++P T + A ++L++K + G PV+D +LVG++ DL+A SIS S+F
Sbjct: 15 LEPETEIGAAAKLLLDKHLNGVPVVDKAGELVGVICQSDLVAQQKSISMP-----SLFTI 69
Query: 157 VDS--TWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVV 214
+D + +++++ ++K V MTP PV V T++E A L++E K LPVV
Sbjct: 70 LDGFIPLSSNDDLEREVNKIAATKVAHAMTPDPVTVTPDTSIEKIADLMVERKLYTLPVV 129
Query: 215 DADG 218
+ DG
Sbjct: 130 E-DG 132
>gi|448746918|ref|ZP_21728582.1| Uncharacterized protein HALTITAN_1531 [Halomonas titanicae BH1]
gi|445565428|gb|ELY21538.1| Uncharacterized protein HALTITAN_1531 [Halomonas titanicae BH1]
Length = 236
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 71/129 (55%), Gaps = 10/129 (7%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL-ALDSISG 145
D MT K + V P V E ++L++ RI+ PV+D + +++G+VS+ DL+ + S S
Sbjct: 12 DIMTPK--VVSVGPDAEVREIAQLLLKHRISAVPVVDSERRVIGIVSEGDLMRRVKSDSD 69
Query: 146 SGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLE 205
G +S + + + K + K++G+ ++MTP P+ V E T L AR+L +
Sbjct: 70 HG---HSWWLSLFTGGKDAGD----YVKSHGRKAHEVMTPNPMTVEENTPLHTIARMLEK 122
Query: 206 TKYRRLPVV 214
+R+PV+
Sbjct: 123 HHIKRVPVL 131
>gi|365885833|ref|ZP_09424817.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 375]
gi|365285444|emb|CCD97348.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 375]
Length = 242
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 62/120 (51%), Gaps = 5/120 (4%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P T + +A I++++ ++G PV+D KLVG+VS+ D + I G+GR +
Sbjct: 14 VTPDTPIVDAANIMLQRHVSGLPVVDATGKLVGVVSEGDFIRRTEI-GTGRKRGRWLRFI 72
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
K+ + +G+ V ++MT +P+ + E L + ++ + +RLPVV +
Sbjct: 73 LGPGKSAAD----FVHEHGRKVAEVMTKSPLTITEDAALAEIVEIMEKNHVKRLPVVKGE 128
>gi|419707528|ref|ZP_14235011.1| Acetoin utilization putative/CBS domain protein [Streptococcus
salivarius PS4]
gi|383282678|gb|EIC80659.1| Acetoin utilization putative/CBS domain protein [Streptococcus
salivarius PS4]
Length = 219
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/133 (36%), Positives = 71/133 (53%), Gaps = 20/133 (15%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFM + + V P TTV A +I+ EK + PVI++D KLVGL+++ +
Sbjct: 3 VKDFMAKR--VVYVSPQTTVAAAADIMREKGLRRLPVIEND-KLVGLITEGTM------- 52
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
AD S P +T + E+ LL+KT VGD+M + V + +LEDA ++L
Sbjct: 53 ----ADAS--PS-KATSLSIYEMNYLLNKTK---VGDIMIKNVLTVSKYASLEDAIYIML 102
Query: 205 ETKYRRLPVVDAD 217
+ K LPVVD D
Sbjct: 103 QNKVGVLPVVDND 115
>gi|357633591|ref|ZP_09131469.1| CBS domain containing membrane protein [Desulfovibrio sp. FW1012B]
gi|357582145|gb|EHJ47478.1| CBS domain containing membrane protein [Desulfovibrio sp. FW1012B]
Length = 218
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 70/134 (52%), Gaps = 19/134 (14%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
VGD+M+T ++ V ++ +A I+ EK+I PV+D D +LVG+VS+ DL A
Sbjct: 3 VGDWMST--DVATVTEDVSMIKAGRIMREKKIRRLPVVDRDGRLVGIVSERDLKAAS--- 57
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
P +T + E+ LLS+ K LMT PV +R + +E AA ++
Sbjct: 58 ----------PSSATTLDMY-EMTYLLSELKIK---GLMTRNPVSIRRSDTVERAALIMR 103
Query: 205 ETKYRRLPVVDADG 218
+ K+ LPV+D G
Sbjct: 104 DRKFGSLPVIDEAG 117
Score = 38.1 bits (87), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 25/41 (60%)
Query: 178 MVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADG 218
+VGD M+ V E ++ A R++ E K RRLPVVD DG
Sbjct: 2 LVGDWMSTDVATVTEDVSMIKAGRIMREKKIRRLPVVDRDG 42
>gi|237756107|ref|ZP_04584682.1| inosine-5'-monophosphate dehydrogenase [Sulfurihydrogenibium
yellowstonense SS-5]
gi|237691732|gb|EEP60765.1| inosine-5'-monophosphate dehydrogenase [Sulfurihydrogenibium
yellowstonense SS-5]
Length = 488
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 60/122 (49%), Gaps = 31/122 (25%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V+P V EALEI+ +I+G PV+DD+ KLVG++++ DL
Sbjct: 101 VRPNQLVKEALEIMSIYKISGVPVVDDENKLVGILTNRDL-------------------- 140
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVV-VRETTNLEDAARLLLETKYRRLPVVDA 216
+ + K K V + MT AP+V +E L++A +L + K +LPVVD
Sbjct: 141 ----------RFIHKKDYEKPVYEFMTKAPLVTAKEGITLDEAIDILQKHKVEKLPVVDD 190
Query: 217 DG 218
+G
Sbjct: 191 EG 192
Score = 40.0 bits (92), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 138
V +FMT K L K T+DEA++IL + ++ PV+DD+ +L GL++ D++
Sbjct: 152 VYEFMT-KAPLVTAKEGITLDEAIDILQKHKVEKLPVVDDEGRLKGLITIKDIV 204
>gi|435852150|ref|YP_007313736.1| CBS domain-containing protein [Methanomethylovorans hollandica DSM
15978]
gi|433662780|gb|AGB50206.1| CBS domain-containing protein [Methanomethylovorans hollandica DSM
15978]
Length = 157
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 73/137 (53%), Gaps = 7/137 (5%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI- 143
V D M T ++ V P TT+ EA ++L + I+G PV+++ ++VG+VS+ DLL L +
Sbjct: 3 VKDIMNT--DVIVCDPHTTISEASQLLKKHNISGLPVVEEG-RVVGIVSEGDLLKLLEVP 59
Query: 144 SGSGRADNSMFPEVDSTWK---TFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAA 200
G S F ++ + + E + +L K V ++M ++ +++DA
Sbjct: 60 EHGGLWLPSPFEVIEIPIRELLNWEETKHMLDDIGSKPVSEIMQKNVHLISPENSIQDAV 119
Query: 201 RLLLETKYRRLPVVDAD 217
RL+ + K RLPVV+ D
Sbjct: 120 RLITKHKVNRLPVVEDD 136
>gi|373857726|ref|ZP_09600466.1| CBS domain containing protein [Bacillus sp. 1NLA3E]
gi|372452397|gb|EHP25868.1| CBS domain containing protein [Bacillus sp. 1NLA3E]
Length = 158
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 65/135 (48%), Gaps = 7/135 (5%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFM + + KP+TTV E + IL RI G PV+DD LVG+VSD D++
Sbjct: 3 VRDFMIRR--IFTAKPSTTVKELISILETNRIGGVPVVDDKGNLVGIVSDGDIVRF---- 56
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPV-VVRETTNLEDAARLL 203
S + S + +++ +L K + D+M + + + E A RL+
Sbjct: 57 LSPNKEKIYLAYYISYIEEAQKIEDVLRKRLNTPIEDIMVKKNIKTLAPDDDFESAIRLI 116
Query: 204 LETKYRRLPVVDADG 218
++++PVV+ G
Sbjct: 117 SRHHFKKIPVVNGAG 131
>gi|427418510|ref|ZP_18908693.1| putative transcriptional regulator, contains C-terminal CBS domains
[Leptolyngbya sp. PCC 7375]
gi|425761223|gb|EKV02076.1| putative transcriptional regulator, contains C-terminal CBS domains
[Leptolyngbya sp. PCC 7375]
Length = 164
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 66/120 (55%), Gaps = 6/120 (5%)
Query: 100 PTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDS 159
P ++ +A+++L RI+G PV+D + VG +S+ DL+ +SG+ M +DS
Sbjct: 28 PEMSLKDAIQLLATHRISGLPVVDATGEAVGEISETDLMW--QVSGASLPAYVML--LDS 83
Query: 160 TWKTFNEVQ--KLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
N + + L K G+ V D+M+ VV+ +L+ AA+L+ + + RRL VVD D
Sbjct: 84 IVYLTNPARYSQELHKALGQTVADVMSRKVTVVQADDDLQRAAQLMHDKQIRRLVVVDDD 143
>gi|441181333|ref|ZP_20970234.1| hypothetical protein SRIM_40043 [Streptomyces rimosus subsp.
rimosus ATCC 10970]
gi|440614273|gb|ELQ77565.1| hypothetical protein SRIM_40043 [Streptomyces rimosus subsp.
rimosus ATCC 10970]
Length = 241
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 69/134 (51%), Gaps = 8/134 (5%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
VG M T E+ + T+ E + +L R TG PV+D D K++G++S+ DL+ +
Sbjct: 6 VGRLMNT--EVVKARSGTSFREVVNLLGRHRKTGLPVVDADGKVLGVISETDLMFRQA-- 61
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
A + + + + + ++ G G+LMT PV + ++ +AARL++
Sbjct: 62 ----AQDILQNRWYNRRRLTGSARAARARKRGLRAGELMTSPPVTIGPHQSVTEAARLMV 117
Query: 205 ETKYRRLPVVDADG 218
K RLPVVDA+G
Sbjct: 118 TGKLDRLPVVDAEG 131
>gi|91773317|ref|YP_566009.1| CBS domain-containing protein [Methanococcoides burtonii DSM 6242]
gi|91712332|gb|ABE52259.1| CBS domain-containing protein [Methanococcoides burtonii DSM 6242]
Length = 154
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 72/137 (52%), Gaps = 7/137 (5%)
Query: 83 YTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS 142
V D M++ + V P T+ ++L +K I+G PV+D+ K+VG+VS+ DLL L +
Sbjct: 1 MNVKDIMSSN--VIVCSPQDTISSTAQLLKKKNISGVPVVDEG-KVVGIVSEVDLLKLLN 57
Query: 143 I-SGSGRADNSMFPEVDSTWKT---FNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLED 198
I G S F ++ + + + +K+LS K V D+M + +++ED
Sbjct: 58 IPEHGGLWLPSPFEIIEIPIRELIGWEDTKKMLSDVGSKPVSDIMEKDVFTIGLESSVED 117
Query: 199 AARLLLETKYRRLPVVD 215
A+R + K RLPVVD
Sbjct: 118 ASRSMSRHKINRLPVVD 134
>gi|402571975|ref|YP_006621318.1| hypothetical protein Desmer_1454 [Desulfosporosinus meridiei DSM
13257]
gi|402253172|gb|AFQ43447.1| CBS-domain-containing membrane protein [Desulfosporosinus meridiei
DSM 13257]
Length = 149
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 69/140 (49%), Gaps = 17/140 (12%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D M T + ++ + E +IL + +I+G PV+D + KLVG+VS+ DLL
Sbjct: 3 VKDVMQT--NVITIRTDMEIKEVAKILYDHQISGAPVVDSEGKLVGIVSEGDLLH----- 55
Query: 145 GSGRADNSMFPEVDST------WKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLED 198
+ N P V ++ + Q L K ++MT V + + ++E+
Sbjct: 56 ---KETNPQIPGVVGILGALIYYRGVRQYQSDLKKLIALQASEIMTSQVVKINKEASIEE 112
Query: 199 AARLLLETKYRRLPVVDADG 218
AA L++ K +RLPV++ DG
Sbjct: 113 AASLMVSKKIKRLPVIE-DG 131
>gi|303247748|ref|ZP_07334017.1| CBS domain containing membrane protein [Desulfovibrio
fructosovorans JJ]
gi|302490832|gb|EFL50731.1| CBS domain containing membrane protein [Desulfovibrio
fructosovorans JJ]
Length = 218
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 71/136 (52%), Gaps = 23/136 (16%)
Query: 85 VGDFMTTKEELHVVKPTTTVD--EALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS 142
VGD+M+ +VV T V +A ++ E +I PV+D D KL+G+VS+ DL A
Sbjct: 3 VGDWMSR----NVVTATGDVSMIKAGRMMREHKIRRLPVVDKDGKLIGIVSERDLKA--- 55
Query: 143 ISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARL 202
A S D+T E+ LLS+ V ++MT +P +R T +E AA +
Sbjct: 56 ------ASPS-----DATSLDMYELTYLLSEMK---VKNIMTKSPRFIRPTDTVERAALI 101
Query: 203 LLETKYRRLPVVDADG 218
+ + K LPV+DADG
Sbjct: 102 MRDLKIGSLPVIDADG 117
Score = 38.5 bits (88), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 42/74 (56%), Gaps = 12/74 (16%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLAL-DSISGS---------- 146
++PT TV+ A I+ + +I PVID D K++G+++D D+ L SI+G
Sbjct: 89 IRPTDTVERAALIMRDLKIGSLPVIDADGKVLGIITDTDIFRLFVSITGIDQDGIQIGLR 148
Query: 147 -GRADNSMFPEVDS 159
G A+ S+ P +D+
Sbjct: 149 LGTAEGSLKPVLDA 162
>gi|16262787|ref|NP_435580.1| hypothetical protein SMa0636 [Sinorhizobium meliloti 1021]
gi|14523419|gb|AAK64992.1| conserved hypothetical protein [Sinorhizobium meliloti 1021]
Length = 217
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 70/131 (53%), Gaps = 18/131 (13%)
Query: 89 MTTKEELHVVK--PTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL---ALDSI 143
MTTK VVK P +V +A +++ + ++G PV+DDD L+G++S+ DL+ L S
Sbjct: 1 MTTK----VVKLSPDDSVRQAAKLMFDHHVSGVPVVDDDGHLLGVISEGDLIRRAELCSE 56
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
+ AD ++ P+ + + + + + VGD+MT PV + E L A L+
Sbjct: 57 ASVLMADMAIDPD--------DRANAFIRRCSWR-VGDVMTANPVTIEEEAPLARVAGLM 107
Query: 204 LETKYRRLPVV 214
E +R+PVV
Sbjct: 108 QERGIKRIPVV 118
>gi|186470615|ref|YP_001861933.1| signal-transduction protein [Burkholderia phymatum STM815]
gi|184196924|gb|ACC74887.1| putative signal-transduction protein with CBS domains [Burkholderia
phymatum STM815]
Length = 231
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 62/116 (53%), Gaps = 5/116 (4%)
Query: 99 KPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVD 158
+P TV EA + LV+ RI+G PV+D LVG+VS+ DL L + S + EV
Sbjct: 15 QPDMTVQEAAKRLVDNRISGMPVVDASGGLVGMVSEGDL--LHRVETGTETRRSRWLEVF 72
Query: 159 STWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVV 214
ST + ++ K +G+ V D+MT + + V + D A L+ + +R+PV+
Sbjct: 73 STTR---DLASTFVKEHGRSVADVMTASVLTVDWQMPVADIADLMERRRIKRVPVM 125
>gi|27379757|ref|NP_771286.1| hypothetical protein blr4646 [Bradyrhizobium japonicum USDA 110]
gi|27352910|dbj|BAC49911.1| blr4646 [Bradyrhizobium japonicum USDA 110]
Length = 228
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 65/125 (52%), Gaps = 13/125 (10%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P TV + +IL+E+RI+ PV+D D K++G+VS+ DLL + SG+ R+
Sbjct: 14 VGPNATVRQVAQILLERRISAVPVVDADNKVLGIVSEGDLLH-RAESGTERS-------- 64
Query: 158 DSTWKTFNEVQKLLS----KTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPV 213
S W L+ K++ V D+MT T L + A LL E + +R+P+
Sbjct: 65 PSWWLRLLTGDAQLATDYVKSHSIKVQDVMTQEVATAAPETPLHEIAMLLEERQIKRVPI 124
Query: 214 VDADG 218
V+ +G
Sbjct: 125 VNKEG 129
>gi|448433394|ref|ZP_21585915.1| peptidase M50 [Halorubrum tebenquichense DSM 14210]
gi|445686407|gb|ELZ38731.1| peptidase M50 [Halorubrum tebenquichense DSM 14210]
Length = 399
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 64/135 (47%), Gaps = 30/135 (22%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TVGD MT +E+LH V +V E + + E+R TG+PVID D +LVG+V+ D
Sbjct: 255 TVGDVMTPREDLHTVSGDASVAELMSRMFEERHTGYPVIDGD-ELVGMVTLEDA------ 307
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
++ EV++ + + M D++ AP E L A + +
Sbjct: 308 ------------------RSIREVERDAYRVDDVMATDVVAAAP----EADAL-TALQTM 344
Query: 204 LETKYRRLPVVDADG 218
E RLPVVD DG
Sbjct: 345 QEHGVGRLPVVDGDG 359
>gi|60686976|gb|AAX35684.1| CBS domain-like protein [Acidithiobacillus caldus]
Length = 158
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 59/126 (46%), Gaps = 14/126 (11%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
+ P T V E IL+E RI G PV D + +L+G+V++ DL+ RA +
Sbjct: 14 IAPETAVAEIARILIEHRINGVPVTDTEGRLLGIVTEGDLV--------HRAADERLEPR 65
Query: 158 DSTWK------TFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRL 211
+S WK F KT G+ +MT + V ++ AARLL + + L
Sbjct: 66 ESVWKENFYRSVFRRRTPETDKTEGRTAAQVMTREVLTVAPEDHVTVAARLLADHNIKSL 125
Query: 212 PVVDAD 217
PV++ +
Sbjct: 126 PVIENE 131
>gi|302392835|ref|YP_003828655.1| hypothetical protein [Acetohalobium arabaticum DSM 5501]
gi|302204912|gb|ADL13590.1| CBS domain containing membrane protein [Acetohalobium arabaticum
DSM 5501]
Length = 148
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 69/135 (51%), Gaps = 16/135 (11%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGS 146
D MT E++ V T+ + +L + I+G PVI+DD ++VG++++ DL+
Sbjct: 5 DIMT--EDVITVNQDDTIKDVARLLSDNEISGLPVINDDGEVVGIITEQDLII------- 55
Query: 147 GRADNSMFPE----VDST--WKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAA 200
R FP+ +DS ++ E ++ K G V ++MT + V + T ++
Sbjct: 56 -RDKKLHFPDYIYLLDSIIYLESLREFEEEFKKMIGTQVEEVMTEEVITVNQETPTDEIV 114
Query: 201 RLLLETKYRRLPVVD 215
L+LE K R+PV+D
Sbjct: 115 ELMLEHKINRVPVID 129
>gi|451948868|ref|YP_007469463.1| CBS-domain-containing membrane protein [Desulfocapsa sulfexigens
DSM 10523]
gi|451908216|gb|AGF79810.1| CBS-domain-containing membrane protein [Desulfocapsa sulfexigens
DSM 10523]
Length = 203
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 58/120 (48%), Gaps = 8/120 (6%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V TT + E + + I+G PV+DD+ K+VG+VS+ D L G S V
Sbjct: 73 VTETTPLLEVANRMADASISGVPVMDDNKKVVGIVSEQDFL-----KGLNNGCKSFMAVV 127
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
+ V +S M GD+MT PV ++E T L + ++ + K RLPV+D +
Sbjct: 128 ARCLQGLGGVDFSISM---GMAGDIMTRPPVTIKENTPLVEITEIMSKNKINRLPVLDQE 184
>gi|406927826|gb|EKD63787.1| cbs protein [uncultured bacterium]
Length = 149
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 69/137 (50%), Gaps = 8/137 (5%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
T MT + +H V PT V ++ + + +T PV+D KL+G+V++ D+ +
Sbjct: 3 TAKQIMT--KSIHSVNPTAAVKTIIQKMAKAGVTAIPVVDKKNKLLGIVTEADVATHELN 60
Query: 144 SGSGRADNSM--FPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAAR 201
+ RA + + +++T K E++K ++T DLMT + + E L++
Sbjct: 61 PHTPRAISLLGGLIYLENTEKYNEELKKFCAQT----ASDLMTKEVITINENATLDEIIA 116
Query: 202 LLLETKYRRLPVVDADG 218
++ E + RLPV+D G
Sbjct: 117 IMQEKQVGRLPVIDEKG 133
Score = 37.0 bits (84), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 65 VFASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDD 124
++ T N T D MT +E+ + T+DE + I+ EK++ PVID+
Sbjct: 74 IYLENTEKYNEELKKFCAQTASDLMT--KEVITINENATLDEIIAIMQEKQVGRLPVIDE 131
Query: 125 DWKLVGLVSDYDLL 138
L G+V+ D++
Sbjct: 132 KGILKGIVTRTDII 145
>gi|313149549|ref|ZP_07811742.1| inosine-5'-monophosphate dehydrogenase [Bacteroides fragilis
3_1_12]
gi|313138316|gb|EFR55676.1| inosine-5'-monophosphate dehydrogenase [Bacteroides fragilis
3_1_12]
Length = 491
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 62/121 (51%), Gaps = 31/121 (25%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
+K +TV +AL ++ E +I G PV+DD+ LVG+V++ DL R + +M +
Sbjct: 104 IKQGSTVRDALALMAEYKIGGIPVVDDNRYLVGIVTNRDL----------RFERNMDKRI 153
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
D ++++K N V ++T+LE AA++L K +LPVVD +
Sbjct: 154 D----------EVMTKEN-----------LVTTNQSTDLEAAAQILQHHKIEKLPVVDKE 192
Query: 218 G 218
G
Sbjct: 193 G 193
Score = 38.5 bits (88), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL 137
D + TKE L +T ++ A +IL +I PV+D + KL+GLV+ D+
Sbjct: 154 DEVMTKENLVTTNQSTDLEAAAQILQHHKIEKLPVVDKEGKLIGLVTYKDI 204
>gi|421591912|ref|ZP_16036684.1| hypothetical protein RCCGEPOP_22317 [Rhizobium sp. Pop5]
gi|403702494|gb|EJZ19048.1| hypothetical protein RCCGEPOP_22317 [Rhizobium sp. Pop5]
Length = 219
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 72/129 (55%), Gaps = 9/129 (6%)
Query: 89 MTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGR 148
MTTK + + P +V A+ I+++ ++G PV+DD ++ GLV++ DLL + + R
Sbjct: 1 MTTK--VVSISPAVSVRHAVAIMLQNHVSGLPVVDDQERVCGLVTEGDLLLRREVRLAPR 58
Query: 149 ADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKY 208
+ + PE+ S ++++ + +NG V D+M+ +V R + + D A L +
Sbjct: 59 SARA--PELISEI----DLERYIC-SNGWCVADVMSRDVIVARPDSEVSDIAESLQVHRI 111
Query: 209 RRLPVVDAD 217
+RLP+V+ +
Sbjct: 112 KRLPIVEEE 120
>gi|187920973|ref|YP_001890005.1| signal transduction protein [Burkholderia phytofirmans PsJN]
gi|187719411|gb|ACD20634.1| putative signal transduction protein with CBS domains [Burkholderia
phytofirmans PsJN]
Length = 229
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 56/119 (47%), Gaps = 5/119 (4%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P TV E I V+ I+G PV+D D + G++S+ DL I R S
Sbjct: 14 VTPEMTVREVARIFVDNGISGAPVLDRDGHVAGMISEGDLFRRAEIGTDERTRTSWL--- 70
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDA 216
W E + + KT+ V D+MT V V+ T L + A +L + +R+PV DA
Sbjct: 71 -DFWSASEEARDYI-KTHALKVRDVMTTDVVTVQPETQLGEVAGILETRRIKRVPVTDA 127
>gi|116249467|ref|YP_765305.1| hypothetical protein pRL90009 [Rhizobium leguminosarum bv. viciae
3841]
gi|115254115|emb|CAK03717.1| conserved CBS domain hypothetical protein [Rhizobium leguminosarum
bv. viciae 3841]
Length = 226
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 73/132 (55%), Gaps = 10/132 (7%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGS 146
D MTT + + P + A+ ++++ ++G PVIDD+ ++ GL+++ DLL I +
Sbjct: 5 DIMTTN--VVSIGPAVGIRHAVAVMMQNNVSGLPVIDDEGRVCGLLTEGDLLLRREIRFA 62
Query: 147 GRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLET 206
RA + PE+ S ++++ +S +NG V D+M+ +V + + D A L
Sbjct: 63 PRAARA--PEIISEI----DLERYIS-SNGWCVADVMSQDVIVASPDSEVSDIAESLQAH 115
Query: 207 KYRRLPVVDADG 218
+ +RLP+V+ DG
Sbjct: 116 RIKRLPIVE-DG 126
>gi|152991023|ref|YP_001356745.1| inosine 5'-monophosphate dehydrogenase [Nitratiruptor sp. SB155-2]
gi|151422884|dbj|BAF70388.1| inosine-5'-monophosphate dehydrogenase [Nitratiruptor sp. SB155-2]
Length = 481
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 57/122 (46%), Gaps = 33/122 (27%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
+ P T+ EA +I+ E RI+G PV+D+D L+G++++ DL
Sbjct: 99 IHPDATIGEAEKIMSEYRISGVPVVDEDMHLLGILTNRDL-------------------- 138
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVV-VRETTNLEDAARLLLETKYRRLPVVDA 216
K K V ++MT P+V + LE+AA + E K +LP++DA
Sbjct: 139 ------------RFEKDFSKKVSEVMTKMPLVTAKPGITLEEAAEKMNEHKIEKLPIIDA 186
Query: 217 DG 218
+G
Sbjct: 187 EG 188
>gi|389690038|ref|ZP_10179055.1| CBS-domain-containing membrane protein [Microvirga sp. WSM3557]
gi|388589556|gb|EIM29844.1| CBS-domain-containing membrane protein [Microvirga sp. WSM3557]
Length = 299
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 65/140 (46%), Gaps = 17/140 (12%)
Query: 80 SGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 139
S TV D MT ++ V T V E +L KRI+ PVI D +L+G+VS+ DL+
Sbjct: 70 SSPLTVADVMT--RDVVSVSTATPVSEIANVLAGKRISAVPVIGADGRLLGIVSEGDLIR 127
Query: 140 LDSISGSGRADNSMFPEVDSTW--KTFNEVQKLLS---KTNGKMVGDLMTPAPVVVRETT 194
I R W K +V+ + +T+G+ +M P V E
Sbjct: 128 RAEIGTERR----------RPWWRKVLTDVEAEAADYVRTHGRKAQHVMRPQVVTATEAM 177
Query: 195 NLEDAARLLLETKYRRLPVV 214
L DAA ++ + + +R+PVV
Sbjct: 178 TLADAADIMEKRRLKRMPVV 197
>gi|408534336|emb|CCK32510.1| hypothetical protein BN159_8132 [Streptomyces davawensis JCM 4913]
Length = 243
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 65/135 (48%), Gaps = 10/135 (7%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
VG MTT E+ + T E +L E RI+G PV+D D +++G++S+ DLL + +
Sbjct: 6 VGSVMTT--EVVRAEYGTPFKEVARLLGEHRISGLPVVDQDEQVIGVISETDLLVRQAET 63
Query: 145 GSGRA--DNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARL 202
S F + +T +K + G LMT PV V + +AAR
Sbjct: 64 PDPYEPRKRSWFAGLTRQGRTRT------AKARARTAGGLMTEPPVTVHADDTIVEAART 117
Query: 203 LLETKYRRLPVVDAD 217
+ + + RLPV+D +
Sbjct: 118 MAQHRVERLPVLDEE 132
>gi|269955495|ref|YP_003325284.1| inosine-5'-monophosphate dehydrogenase [Xylanimonas cellulosilytica
DSM 15894]
gi|269304176|gb|ACZ29726.1| inosine-5'-monophosphate dehydrogenase [Xylanimonas cellulosilytica
DSM 15894]
Length = 501
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 59/117 (50%), Gaps = 30/117 (25%)
Query: 103 TVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWK 162
T++E + E RI+GFPV+D +L+G+V++ DL F V + W
Sbjct: 109 TLEELDRLAGEYRISGFPVVDAGGRLIGIVTNRDL---------------RFTPV-AEWA 152
Query: 163 TFNEVQKLLSKTNGKMVGDLMTPAPVVVRETT-NLEDAARLLLETKYRRLPVVDADG 218
T V D+MTPAP++ +T + E+A LL + K RLP+VDADG
Sbjct: 153 TTT-------------VADVMTPAPLITGPSTISREEATLLLRKHKLERLPLVDADG 196
>gi|170076975|ref|YP_001733613.1| hypothetical protein SYNPCC7002_A0347 [Synechococcus sp. PCC 7002]
gi|169884644|gb|ACA98357.1| CBS domain protein [Synechococcus sp. PCC 7002]
Length = 155
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 70/138 (50%), Gaps = 12/138 (8%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL----LA 139
TV + MT VVK ++ A+ +LVEK+I+ PV+D KLVG++SD DL
Sbjct: 5 TVAEVMTPDPA--VVKADDSLQTAIALLVEKKISALPVVDGQGKLVGIISDSDLTWQETG 62
Query: 140 LDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDA 199
+D+ D+ ++ + + K E+ K L G+ VG++M+ + + +A
Sbjct: 63 VDTPPYIMLLDSVIY--LQNPAKHDAEIHKAL----GQTVGEVMSKKVYTIHPEKIVREA 116
Query: 200 ARLLLETKYRRLPVVDAD 217
A L+ E RLPV+ D
Sbjct: 117 AHLMHEKHVGRLPVIAPD 134
Score = 40.0 bits (92), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 26/42 (61%)
Query: 177 KMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADG 218
K V ++MTP P VV+ +L+ A LL+E K LPVVD G
Sbjct: 4 KTVAEVMTPDPAVVKADDSLQTAIALLVEKKISALPVVDGQG 45
>gi|322373958|ref|ZP_08048493.1| acetoin utilization protein AcuB [Streptococcus sp. C150]
gi|321277330|gb|EFX54400.1| acetoin utilization protein AcuB [Streptococcus sp. C150]
Length = 219
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/133 (36%), Positives = 71/133 (53%), Gaps = 20/133 (15%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFM + + V P TTV A +I+ EK + PVI++D KLVGL+++ +
Sbjct: 3 VKDFMAKR--VVYVSPQTTVAAAADIMREKGLRRLPVIEND-KLVGLITEGTM------- 52
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
AD S P +T + E+ LL+KT VGD+M + V + +LEDA ++L
Sbjct: 53 ----ADAS--PS-KATSLSIYEMNYLLNKTK---VGDIMIKNVLTVSKYASLEDAIYIML 102
Query: 205 ETKYRRLPVVDAD 217
+ K LPVVD D
Sbjct: 103 KNKVGVLPVVDND 115
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 52/92 (56%), Gaps = 4/92 (4%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL-ALDSI 143
VGD M + + V ++++A+ I+++ ++ PV+D+D ++ G+++D D+ A I
Sbjct: 77 VGDIMI--KNVLTVSKYASLEDAIYIMLKNKVGVLPVVDND-QISGIITDKDVFRAFLEI 133
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTN 175
SG G+A + EV T + ++ L+S N
Sbjct: 134 SGYGQAGIRIGLEVLDTPRVLEKIANLISSEN 165
>gi|303325679|ref|ZP_07356122.1| CBS domain protein/ACT domain protein [Desulfovibrio sp. 3_1_syn3]
gi|345892287|ref|ZP_08843110.1| hypothetical protein HMPREF1022_01770 [Desulfovibrio sp.
6_1_46AFAA]
gi|302863595|gb|EFL86526.1| CBS domain protein/ACT domain protein [Desulfovibrio sp. 3_1_syn3]
gi|345047426|gb|EGW51291.1| hypothetical protein HMPREF1022_01770 [Desulfovibrio sp.
6_1_46AFAA]
Length = 222
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 71/134 (52%), Gaps = 19/134 (14%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V ++MTT E+ V P T++ + +++ + + PV+DD +VG++SD D+
Sbjct: 3 VQNWMTT--EVITVTPETSLLKIGKLMRDNSVRRLPVLDDKGHVVGIISDRDV------- 53
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
D S P +T + E+ LL++ K D+MTP P V+ T +E AA L+L
Sbjct: 54 ----RDAS--PSKATTLDMY-EMHYLLAELKAK---DIMTPRPFTVKPTDTVEKAAMLML 103
Query: 205 ETKYRRLPVVDADG 218
+ K+ LPVV+ G
Sbjct: 104 DNKFGGLPVVEESG 117
Score = 44.3 bits (103), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 36/49 (73%), Gaps = 1/49 (2%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL-ALDSISG 145
VKPT TV++A ++++ + G PV+++ +LVG++SD D+ AL SI+G
Sbjct: 89 VKPTDTVEKAAMLMLDNKFGGLPVVEESGRLVGIISDQDVFKALVSITG 137
>gi|325300047|ref|YP_004259964.1| inosine-5'-monophosphate dehydrogenase [Bacteroides salanitronis
DSM 18170]
gi|324319600|gb|ADY37491.1| inosine-5'-monophosphate dehydrogenase [Bacteroides salanitronis
DSM 18170]
Length = 491
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 62/121 (51%), Gaps = 31/121 (25%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
+K +TV +AL I+ E +I G PV+DD+ LVG+V++ DL R + M +
Sbjct: 104 IKRGSTVKDALGIMAEYKIGGIPVVDDENYLVGIVTNRDL----------RFERDMSKHI 153
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
D ++++K N ++T AP T++E A+ +L K +LPVVD +
Sbjct: 154 D----------EVMTKEN------IVTTAP-----GTDMETASEILQRNKIEKLPVVDEN 192
Query: 218 G 218
G
Sbjct: 193 G 193
Score = 40.4 bits (93), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 31/51 (60%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL 137
D + TKE + P T ++ A EIL +I PV+D++ KL+GL++ D+
Sbjct: 154 DEVMTKENIVTTAPGTDMETASEILQRNKIEKLPVVDENGKLIGLITYKDI 204
>gi|367478289|ref|ZP_09477602.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 285]
gi|365269403|emb|CCD90070.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 285]
Length = 249
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 59/133 (44%), Gaps = 31/133 (23%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA-------------LDSIS 144
V P T V EA I++ I G PV+D +LVG+V+D D L LD +
Sbjct: 14 VTPGTPVAEAARIMLRNHIGGLPVVDASGRLVGMVTDGDFLRRAELGTERKQGRWLDLLV 73
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
G GR + ++G+ VGD+M+ V V +L + A ++
Sbjct: 74 GRGR------------------IAADFVHSHGRTVGDIMSRPAVTVSTDASLAELAEIME 115
Query: 205 ETKYRRLPVVDAD 217
+ +RLPVV+ D
Sbjct: 116 KRSIKRLPVVNGD 128
>gi|338997445|ref|ZP_08636142.1| hypothetical protein GME_05560 [Halomonas sp. TD01]
gi|338765623|gb|EGP20558.1| hypothetical protein GME_05560 [Halomonas sp. TD01]
Length = 229
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 61/117 (52%), Gaps = 6/117 (5%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P V + ++L+E RI+ P++DD+ +++G+VS+ DL+ + S + +
Sbjct: 14 VGPDANVRDIAQLLLEHRISAVPIVDDERRVLGIVSEGDLMR--RVKDEADDSRSWWLSL 71
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVV 214
S K E K++G+ ++MT P+ V E L ARLL + +R+PVV
Sbjct: 72 FSGGKDAGE----YVKSHGRKAHEVMTSKPLTVEENAPLHTIARLLEKHHIKRVPVV 124
>gi|148378202|ref|YP_001252743.1| hypothetical protein CBO0199 [Clostridium botulinum A str. ATCC
3502]
gi|153930979|ref|YP_001382603.1| hypothetical protein CLB_0240 [Clostridium botulinum A str. ATCC
19397]
gi|153936233|ref|YP_001386155.1| hypothetical protein CLC_0255 [Clostridium botulinum A str. Hall]
gi|153940514|ref|YP_001389562.1| hypothetical protein CLI_0264 [Clostridium botulinum F str.
Langeland]
gi|168177532|ref|ZP_02612196.1| CBS domain protein [Clostridium botulinum NCTC 2916]
gi|170756627|ref|YP_001779830.1| hypothetical protein CLD_0576 [Clostridium botulinum B1 str. Okra]
gi|226947420|ref|YP_002802511.1| CBS domain-containing protein [Clostridium botulinum A2 str. Kyoto]
gi|384460642|ref|YP_005673237.1| hypothetical protein CBF_0232 [Clostridium botulinum F str. 230613]
gi|421838951|ref|ZP_16272654.1| hypothetical protein CFSAN001627_24621 [Clostridium botulinum
CFSAN001627]
gi|429243973|ref|ZP_19207455.1| hypothetical protein CFSAN001628_000690 [Clostridium botulinum
CFSAN001628]
gi|148287686|emb|CAL81751.1| conserved hypothetical membrane [Clostridium botulinum A str. ATCC
3502]
gi|152927023|gb|ABS32523.1| CBS domain protein [Clostridium botulinum A str. ATCC 19397]
gi|152932147|gb|ABS37646.1| CBS domain protein [Clostridium botulinum A str. Hall]
gi|152936410|gb|ABS41908.1| CBS domain protein [Clostridium botulinum F str. Langeland]
gi|169121839|gb|ACA45675.1| CBS domain protein [Clostridium botulinum B1 str. Okra]
gi|182670387|gb|EDT82361.1| CBS domain protein [Clostridium botulinum NCTC 2916]
gi|226844378|gb|ACO87044.1| CBS domain protein [Clostridium botulinum A2 str. Kyoto]
gi|295317659|gb|ADF98036.1| CBS domain protein [Clostridium botulinum F str. 230613]
gi|409736556|gb|EKN37942.1| hypothetical protein CFSAN001627_24621 [Clostridium botulinum
CFSAN001627]
gi|428758893|gb|EKX81284.1| hypothetical protein CFSAN001628_000690 [Clostridium botulinum
CFSAN001628]
Length = 138
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 68/131 (51%), Gaps = 30/131 (22%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D MT + + V +V++A +++ E + P+ D++ K+VG+++D D+ AL S++
Sbjct: 3 VMDVMT--QNVATVNRNDSVEKAAQLMSEHNVGSIPICDNN-KVVGVITDRDI-ALRSVA 58
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+DN++ VGD+MT PVV + ++ DAAR++
Sbjct: 59 KG--SDNNIK------------------------VGDIMTSNPVVANKDMDIHDAARIMS 92
Query: 205 ETKYRRLPVVD 215
E + RRLPV D
Sbjct: 93 ERQIRRLPVED 103
>gi|395777171|ref|ZP_10457686.1| hypothetical protein Saci8_45729 [Streptomyces acidiscabies 84-104]
Length = 222
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 63/133 (47%), Gaps = 13/133 (9%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
VG MT E +H V P T E +L RI+G PV+D D K++G+VS+ DLLA
Sbjct: 6 VGSVMTA-EVVHAV-PDTPFKEVARLLSRHRISGLPVVDGDDKVLGVVSETDLLA----- 58
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
P + ++ +K + G LM+ PV V + +AAR +
Sbjct: 59 ------RQAAPVASGPARLTRAARRRTAKATARTAGQLMSGPPVTVHADDTIAEAARTMA 112
Query: 205 ETKYRRLPVVDAD 217
E + RLPV+D +
Sbjct: 113 ERRVERLPVLDVE 125
>gi|205355813|ref|ZP_03222582.1| Inosine 5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
jejuni CG8421]
gi|419667186|ref|ZP_14197166.1| inosine 5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
jejuni 1997-10]
gi|205346247|gb|EDZ32881.1| Inosine 5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
jejuni CG8421]
gi|380646431|gb|EIB63398.1| inosine 5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
jejuni 1997-10]
Length = 485
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 56/122 (45%), Gaps = 33/122 (27%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P +V EALEI+ E RI+G PV+D+D KL+G++++ DL S S
Sbjct: 99 VSPKASVAEALEIMAEYRISGVPVVDEDKKLIGILTNRDLRFESDFSNS----------- 147
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVR-ETTNLEDAARLLLETKYRRLPVVDA 216
V ++MT P++ + L+DA ++ K +LP+VD
Sbjct: 148 ---------------------VENVMTKMPLITAPKGCTLDDAEKIFSTNKVEKLPIVDE 186
Query: 217 DG 218
G
Sbjct: 187 QG 188
>gi|169830475|ref|YP_001716457.1| hypothetical protein Daud_0264 [Candidatus Desulforudis audaxviator
MP104C]
gi|169637319|gb|ACA58825.1| CBS domain containing protein [Candidatus Desulforudis audaxviator
MP104C]
Length = 153
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 71/134 (52%), Gaps = 10/134 (7%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGS 146
D MT+ E+ V P V++ ++L+E I+G PV+D+ KLVG+V++ DL+ +
Sbjct: 8 DIMTS--EVITVHPEDDVEKVAQLLLEHHISGLPVVDEGGKLVGVVTEGDLVFREK---- 61
Query: 147 GRADNSMFPEVDSTWKTFNEVQKLLS---KTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
+ ++ V + + ++ + +T + VGDLM+ V +ED A ++
Sbjct: 62 -KVRAPLYVMVFDSLIYLEKPKRFIEEIRRTVAQKVGDLMSTKLYTVGPEAPIEDVATII 120
Query: 204 LETKYRRLPVVDAD 217
++ R+PVVDA+
Sbjct: 121 VDRGINRVPVVDAE 134
Score = 38.9 bits (89), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 35/54 (64%), Gaps = 2/54 (3%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 138
VGD M+TK L+ V P +++ I+V++ I PV+D + +L+G++S D++
Sbjct: 96 VGDLMSTK--LYTVGPEAPIEDVATIIVDRGINRVPVVDAENRLLGIISRQDII 147
>gi|333986774|ref|YP_004519381.1| CBS domain-containing membrane protein [Methanobacterium sp.
SWAN-1]
gi|333824918|gb|AEG17580.1| CBS domain containing membrane protein [Methanobacterium sp.
SWAN-1]
Length = 159
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 66/126 (52%), Gaps = 9/126 (7%)
Query: 99 KPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFP--- 155
K T + + + L + +I+G P++DDD K++G+VS+ D++ L + N + P
Sbjct: 16 KSTDKIIDVAQSLRDNKISGAPIVDDDGKVIGIVSEGDIMRLIEVHSPQM--NLILPSPL 73
Query: 156 ---EVDSTWK-TFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRL 211
E+ K ++E+ K L ++G++MT V V ++ D A L+ +RL
Sbjct: 74 DWIELPLRMKHEYDEITKGLKTAAKVLIGEIMTKKVVSVLPDASISDGAALMDSHDIKRL 133
Query: 212 PVVDAD 217
PVVDAD
Sbjct: 134 PVVDAD 139
>gi|221635717|ref|YP_002523593.1| UspA domain protein, putative [Thermomicrobium roseum DSM 5159]
gi|221158173|gb|ACM07291.1| UspA domain protein, putative [Thermomicrobium roseum DSM 5159]
Length = 462
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 61/119 (51%), Gaps = 7/119 (5%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS--GSGRADNSMFP 155
V P T+++ ++++++I PV+D D +L+GL+ + D LA + + RA P
Sbjct: 317 VGPDATLEQVARLMLDRQIGAVPVVDADGRLLGLIREEDFLAQEKPIPFAAFRA-----P 371
Query: 156 EVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVV 214
++ W ++++ ++ GD+ V V E T L A+L++E R +PVV
Sbjct: 372 QLFGHWLNAEGIERIYAEARTMKAGDVAQAPAVTVTEDTPLSRIAQLMVERDVRHIPVV 430
Score = 40.8 bits (94), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 25/38 (65%)
Query: 181 DLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADG 218
D+MTP PV V LE ARL+L+ + +PVVDADG
Sbjct: 308 DIMTPDPVTVGPDATLEQVARLMLDRQIGAVPVVDADG 345
>gi|86140967|ref|ZP_01059526.1| Inosine monophosphate dehydrogenase-related protein
[Leeuwenhoekiella blandensis MED217]
gi|85832909|gb|EAQ51358.1| Inosine monophosphate dehydrogenase-related protein
[Leeuwenhoekiella blandensis MED217]
Length = 153
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 67/131 (51%), Gaps = 25/131 (19%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D+MTTK L P +V + ++ L++ RI+G PV++++++L+G++S+ D + IS
Sbjct: 22 VSDYMTTK--LITFTPDQSVMDVMQKLIKHRISGAPVVNENYELLGVISEGD--CIKHIS 77
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
S R N P ++T VG M + N+ DAAR +
Sbjct: 78 DS-RYHN--LPMDNAT------------------VGQNMAIDVETIDGNMNVFDAARFFI 116
Query: 205 ETKYRRLPVVD 215
E K+RR P+V+
Sbjct: 117 ERKHRRFPIVE 127
>gi|11498858|ref|NP_070087.1| inosine monophosphate dehydrogenase [Archaeoglobus fulgidus DSM
4304]
gi|2649320|gb|AAB89984.1| inosine monophosphate dehydrogenase, putative [Archaeoglobus
fulgidus DSM 4304]
Length = 259
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 65/134 (48%), Gaps = 35/134 (26%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D+MT + ++ +KP TV +A+E++ + FPV+DD+ ++VG +S DLL
Sbjct: 5 VKDYMT--KNVYTLKPDNTVKDAIELVRKTGHDSFPVVDDNMRVVGYISAVDLL------ 56
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
D S PE + D+M+ V R+ +L DAAR++
Sbjct: 57 -----DKS--PETK--------------------IRDIMSRELYVARDFMDLRDAARVMF 89
Query: 205 ETKYRRLPVVDADG 218
T + +LPVVD D
Sbjct: 90 RTGHSKLPVVDEDN 103
>gi|404450120|ref|ZP_11015106.1| hypothetical protein A33Q_12375 [Indibacter alkaliphilus LW1]
gi|403764319|gb|EJZ25224.1| hypothetical protein A33Q_12375 [Indibacter alkaliphilus LW1]
Length = 152
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 64/134 (47%), Gaps = 26/134 (19%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D M+T L P ++D L++L +++I+G PVI+ D KLVG++S+ D L I
Sbjct: 22 VKDHMST--NLVTFYPEDSIDHVLDMLTKRKISGAPVINHDKKLVGIISEVD--CLKEII 77
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
++ FP K M D++T +P +L DAA+ L
Sbjct: 78 KGKYSNTPSFP----------------GKVEEHMTKDVITLSP-----EMSLFDAAQKFL 116
Query: 205 ETKYRRLPVVDADG 218
E K RR PV+ DG
Sbjct: 117 ELKIRRFPVL-KDG 129
>gi|323351071|ref|ZP_08086728.1| CBS domain protein [Streptococcus sanguinis VMC66]
gi|401681231|ref|ZP_10813136.1| CBS domain protein [Streptococcus sp. AS14]
gi|422820741|ref|ZP_16868934.1| CBS domain protein [Streptococcus sanguinis SK353]
gi|422823062|ref|ZP_16871250.1| CBS domain protein [Streptococcus sanguinis SK405]
gi|422826857|ref|ZP_16875036.1| CBS domain protein [Streptococcus sanguinis SK678]
gi|422847223|ref|ZP_16893906.1| CBS domain protein [Streptococcus sanguinis SK72]
gi|422854801|ref|ZP_16901465.1| CBS domain protein [Streptococcus sanguinis SK160]
gi|322122795|gb|EFX94504.1| CBS domain protein [Streptococcus sanguinis VMC66]
gi|324991359|gb|EGC23292.1| CBS domain protein [Streptococcus sanguinis SK353]
gi|324993712|gb|EGC25631.1| CBS domain protein [Streptococcus sanguinis SK405]
gi|324994975|gb|EGC26888.1| CBS domain protein [Streptococcus sanguinis SK678]
gi|325687061|gb|EGD29084.1| CBS domain protein [Streptococcus sanguinis SK72]
gi|325696296|gb|EGD38187.1| CBS domain protein [Streptococcus sanguinis SK160]
gi|400187366|gb|EJO21561.1| CBS domain protein [Streptococcus sp. AS14]
Length = 218
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 73/133 (54%), Gaps = 20/133 (15%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT K + + P TT+ A +++ E+++ PVI++D +LVGLV++ +I+
Sbjct: 3 VKDFMTRK--VVYISPNTTIAHAADMMREQKLHRLPVIEND-QLVGLVTE------GTIA 53
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+ + +T + E+ LL+KT VGD+M V + + +LEDA L+L
Sbjct: 54 EASPSK--------ATSLSIYEMNYLLNKTK---VGDVMIRDVVTISQFASLEDATYLML 102
Query: 205 ETKYRRLPVVDAD 217
+ K LPVVD +
Sbjct: 103 KNKIGILPVVDNE 115
>gi|148926035|ref|ZP_01809721.1| inosine-5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
jejuni CG8486]
gi|145845514|gb|EDK22606.1| inosine-5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
jejuni CG8486]
Length = 445
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 56/122 (45%), Gaps = 33/122 (27%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P +V EALEI+ E RI+G PV+D+D KL+G++++ DL S S
Sbjct: 59 VSPKASVAEALEIMAEYRISGVPVVDEDKKLIGILTNRDLRFESDFSNS----------- 107
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVR-ETTNLEDAARLLLETKYRRLPVVDA 216
V ++MT P++ + L+DA ++ K +LP+VD
Sbjct: 108 ---------------------VENVMTKMPLITAPKGCTLDDAEKIFSTNKVEKLPIVDE 146
Query: 217 DG 218
G
Sbjct: 147 QG 148
>gi|422848126|ref|ZP_16894802.1| CBS domain protein [Streptococcus sanguinis SK115]
gi|422851118|ref|ZP_16897788.1| CBS domain protein [Streptococcus sanguinis SK150]
gi|422878252|ref|ZP_16924718.1| CBS domain protein [Streptococcus sanguinis SK1059]
gi|422928107|ref|ZP_16961049.1| CBS domain protein [Streptococcus sanguinis ATCC 29667]
gi|422931103|ref|ZP_16964034.1| CBS domain protein [Streptococcus sanguinis SK340]
gi|325690658|gb|EGD32659.1| CBS domain protein [Streptococcus sanguinis SK115]
gi|325694987|gb|EGD36891.1| CBS domain protein [Streptococcus sanguinis SK150]
gi|332367226|gb|EGJ44961.1| CBS domain protein [Streptococcus sanguinis SK1059]
gi|339617252|gb|EGQ21878.1| CBS domain protein [Streptococcus sanguinis ATCC 29667]
gi|339620285|gb|EGQ24855.1| CBS domain protein [Streptococcus sanguinis SK340]
Length = 218
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 73/133 (54%), Gaps = 20/133 (15%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT K + + P TT+ A +++ E+++ PVI++D +LVGLV++ +I+
Sbjct: 3 VKDFMTRK--VVYISPNTTIAHAADMMREQKLHRLPVIEND-QLVGLVTE------GTIA 53
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+ + +T + E+ LL+KT VGD+M V + + +LEDA L+L
Sbjct: 54 EASPSK--------ATSLSIYEMNYLLNKTK---VGDVMIRDVVTISQFASLEDATYLML 102
Query: 205 ETKYRRLPVVDAD 217
+ K LPVVD +
Sbjct: 103 KNKIGILPVVDNE 115
>gi|307719578|ref|YP_003875110.1| hypothetical protein STHERM_c19020 [Spirochaeta thermophila DSM
6192]
gi|386347674|ref|YP_006045923.1| hypothetical protein [Spirochaeta thermophila DSM 6578]
gi|306533303|gb|ADN02837.1| CBS domain containing protein [Spirochaeta thermophila DSM 6192]
gi|339412641|gb|AEJ62206.1| CBS domain containing membrane protein [Spirochaeta thermophila DSM
6578]
Length = 214
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 64/120 (53%), Gaps = 17/120 (14%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P TT+ +A E++ ++I PVID+ ++VG+VS+ DLL P
Sbjct: 14 VTPATTLSDAQELMRREKIHRLPVIDEKGRVVGIVSEKDLLYAS-------------PSP 60
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
+T + E+ +LLSK K V + TP + V E T +EDAAR++++ LPVV +
Sbjct: 61 ATTLNVY-EMAQLLSKVRIKEV--MRTPV-ITVTEDTYIEDAARIMVDNNIGGLPVVRGE 116
>gi|424875673|ref|ZP_18299332.1| CBS-domain-containing membrane protein [Rhizobium leguminosarum bv.
viciae WSM1455]
gi|393163276|gb|EJC63329.1| CBS-domain-containing membrane protein [Rhizobium leguminosarum bv.
viciae WSM1455]
Length = 226
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 73/132 (55%), Gaps = 10/132 (7%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGS 146
D MTT + + P + A+ ++++ ++G PVIDD+ ++ G++++ DLL I +
Sbjct: 5 DIMTTN--VVSIGPAVGIRHAVAVMMQNNVSGLPVIDDEGRVCGMLTEGDLLLRKEIRFA 62
Query: 147 GRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLET 206
RA + PE+ S ++++ +S +NG V D+M+ +V + + D A L
Sbjct: 63 PRAARA--PEIISEI----DLERYIS-SNGWCVADVMSQDVIVASPDSEVSDIAESLQAH 115
Query: 207 KYRRLPVVDADG 218
+ +RLP+V+ DG
Sbjct: 116 RIKRLPIVE-DG 126
>gi|429726903|ref|ZP_19261688.1| inosine-5'-monophosphate dehydrogenase [Prevotella sp. oral taxon
473 str. F0040]
gi|429145343|gb|EKX88433.1| inosine-5'-monophosphate dehydrogenase [Prevotella sp. oral taxon
473 str. F0040]
Length = 493
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 60/121 (49%), Gaps = 31/121 (25%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
+K TV EAL+++ E I G PV+DD+ +LVG+V++ DL R ++++ +
Sbjct: 106 IKRGKTVREALDLMAEYHIGGIPVVDDEMRLVGIVTNRDL----------RFEHNLDKAI 155
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
D + N L TN TT+L A+ +L + K +LPV+DA+
Sbjct: 156 DEVMTSEN-----LVTTN----------------TTTDLVAASEILQKNKIEKLPVIDAN 194
Query: 218 G 218
G
Sbjct: 195 G 195
Score = 36.6 bits (83), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 29/51 (56%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL 137
D + T E L TT + A EIL + +I PVID + KLVGL++ D+
Sbjct: 156 DEVMTSENLVTTNTTTDLVAASEILQKNKIEKLPVIDANGKLVGLITYKDI 206
>gi|393785532|ref|ZP_10373682.1| inosine-5'-monophosphate dehydrogenase [Bacteroides salyersiae
CL02T12C01]
gi|392662287|gb|EIY55851.1| inosine-5'-monophosphate dehydrogenase [Bacteroides salyersiae
CL02T12C01]
Length = 491
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 61/120 (50%), Gaps = 31/120 (25%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
+K +TV +AL ++ E +I G PV+DD+ LVG+V++ DL R + M +
Sbjct: 104 IKKGSTVRDALALMAEYKIGGIPVVDDNRYLVGIVTNRDL----------RFERDMNKRI 153
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
D ++++K N V ++T+LE AA++L + K +LPVVD D
Sbjct: 154 D----------EVMTKDN-----------LVTTNQSTDLEAAAQILQKHKIEKLPVVDKD 192
Score = 38.1 bits (87), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 31/51 (60%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL 137
D + TK+ L +T ++ A +IL + +I PV+D D KL+GLV+ D+
Sbjct: 154 DEVMTKDNLVTTNQSTDLEAAAQILQKHKIEKLPVVDKDNKLIGLVTYKDI 204
>gi|294101984|ref|YP_003553842.1| putative signal transduction protein with CBS domains
[Aminobacterium colombiense DSM 12261]
gi|293616964|gb|ADE57118.1| putative signal transduction protein with CBS domains
[Aminobacterium colombiense DSM 12261]
Length = 152
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 67/138 (48%), Gaps = 19/138 (13%)
Query: 86 GDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA------ 139
G+ M +L V + +A+ IL ++G PV+ +DW+LVG +S+ D+L
Sbjct: 6 GELM--HRDLTAVMEEDLIQDAVHILYSHNLSGIPVVKEDWELVGYLSETDILQAAIPTY 63
Query: 140 LDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDA 199
L+ ++ S +N VD F + K K+V + MT P V + +L
Sbjct: 64 LEILAQSSFLNNGEIHLVDR----FKNLGK-------KVVREFMTKNPYSVPPSASLMTV 112
Query: 200 ARLLLETKYRRLPVVDAD 217
A L+L K +RLPVV+ +
Sbjct: 113 ADLMLRKKIKRLPVVEGN 130
>gi|317153451|ref|YP_004121499.1| hypothetical protein Daes_1741 [Desulfovibrio aespoeensis Aspo-2]
gi|316943702|gb|ADU62753.1| CBS domain containing protein [Desulfovibrio aespoeensis Aspo-2]
Length = 150
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 65/131 (49%), Gaps = 8/131 (6%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGS 146
D MT K + P T + A +L+E +I G PVID+ +VG++ DL+A
Sbjct: 6 DIMTAK--CITLTPDTDIATAARVLLENKINGAPVIDEKGTVVGVLCQADLVA----QQK 59
Query: 147 GRADNSMFPEVDSTW--KTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
S F +D + + +E+++ ++K V + MT AP V+ T ++D A ++
Sbjct: 60 KITLPSFFTLLDGVFPLSSHDELEREITKIAALKVAEAMTAAPTVIAPDTGIDDIATMMA 119
Query: 205 ETKYRRLPVVD 215
K LPV+D
Sbjct: 120 NKKLYTLPVLD 130
>gi|402850829|ref|ZP_10899015.1| hypothetical protein A33M_4252 [Rhodovulum sp. PH10]
gi|402498839|gb|EJW10565.1| hypothetical protein A33M_4252 [Rhodovulum sp. PH10]
Length = 240
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 65/134 (48%), Gaps = 15/134 (11%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGS 146
D MTT ++ PT TV + + L+E RI G PV+D+ +VG++ + DLL
Sbjct: 5 DIMTT--DVVTAAPTDTVHDVAKKLLEHRIGGLPVVDERSHVVGMIGENDLL-------- 54
Query: 147 GRADNSMFPEVDSTWKTFNEVQKLLS----KTNGKMVGDLMTPAPVVVRETTNLEDAARL 202
R + S W F ++L+ K +G+ V D+M+ T + + ARL
Sbjct: 55 -RRAETGTDHTRSGWLQFLLGHEVLAAEFVKEHGRRVSDVMSVEVATATPDTPVGEIARL 113
Query: 203 LLETKYRRLPVVDA 216
L + R+P+VDA
Sbjct: 114 LERHRVTRVPIVDA 127
>gi|422884639|ref|ZP_16931087.1| CBS domain protein [Streptococcus sanguinis SK49]
gi|332359069|gb|EGJ36890.1| CBS domain protein [Streptococcus sanguinis SK49]
Length = 218
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 73/133 (54%), Gaps = 20/133 (15%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT K + + P TT+ A +++ E+++ PVI++D +LVGLV++ +I+
Sbjct: 3 VKDFMTRK--VVYISPNTTIAHAADMMREQKLHRLPVIEND-QLVGLVTE------GTIA 53
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+ + +T + E+ LL+KT VGD+M V + + +LEDA L+L
Sbjct: 54 EASPSK--------ATSLSIYEMNYLLNKTK---VGDVMIRDVVTISQFASLEDATYLML 102
Query: 205 ETKYRRLPVVDAD 217
+ K LPVVD +
Sbjct: 103 KNKIGILPVVDNE 115
>gi|301064753|ref|ZP_07205133.1| conserved hypothetical protein [delta proteobacterium NaphS2]
gi|300441128|gb|EFK05513.1| conserved hypothetical protein [delta proteobacterium NaphS2]
Length = 431
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 66/138 (47%), Gaps = 10/138 (7%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D M + + H V P T V E L I+ + I V+D D +L+GL+SD LL+ S
Sbjct: 279 VSDIM--RRDTHTVTPDTPVHEVLTIIDDNDIQRVAVVDSDGRLLGLISDRTLLSAFSEK 336
Query: 145 GSG--RADNSMFPEVDSTWKTFNEVQKLLSK-TNGKMVGDLMTPAPVVVRETTNLEDAAR 201
G + + P T N +KL + M DL+T VRE T+++ A
Sbjct: 337 APGVWEVLSKLSPFSAKPKHTGNVREKLGDQPAKAVMKTDLIT-----VREDTDIDQAIA 391
Query: 202 LLLETKYRRLPVVDADGW 219
L+ E +RLPVVD G
Sbjct: 392 LMTEHGIKRLPVVDDQGM 409
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 60/119 (50%), Gaps = 17/119 (14%)
Query: 105 DEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS----ISGSGRADNSMFPEVDST 160
D+ ++ L+ R TG PV+D + + VG+VS DL+ ++ ++D+ V
Sbjct: 137 DQVMKALLSARFTGLPVVDSENRPVGVVSQSDLIYRAGMPVRLALMAQSDHERLKTV--- 193
Query: 161 WKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGW 219
V+ L +KT D+MT V ++E L A +++ K +RLPVV+ +G+
Sbjct: 194 ------VKGLAAKT----AQDIMTGPAVTIQENDPLTRAVTAMVKNKVKRLPVVNGEGF 242
>gi|387816426|ref|YP_005676770.1| inosine-5'-monophosphate dehydrogenase [Clostridium botulinum
H04402 065]
gi|322804467|emb|CBZ02017.1| inosine-5'-monophosphate dehydrogenase [Clostridium botulinum
H04402 065]
Length = 138
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 67/129 (51%), Gaps = 30/129 (23%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGS 146
D MT + + V +V++A +++ E + P+ D++ K+VG+++D D+ AL S++
Sbjct: 5 DVMT--QNVATVNRNDSVEKAAQLMSEHNVGSIPICDNN-KVVGVITDRDI-ALRSVAKG 60
Query: 147 GRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLET 206
+DN++ VGD+MT PVV + ++ DAAR++ E
Sbjct: 61 --SDNNIK------------------------VGDIMTSNPVVANKDMDIHDAARIMSER 94
Query: 207 KYRRLPVVD 215
+ RRLPV D
Sbjct: 95 QIRRLPVED 103
>gi|260771538|ref|ZP_05880462.1| CBS domain containing membrane protein [Vibrio furnissii CIP
102972]
gi|260613503|gb|EEX38698.1| CBS domain containing membrane protein [Vibrio furnissii CIP
102972]
Length = 357
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 59/120 (49%), Gaps = 20/120 (16%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
+KP T+ +ALE+L + + T PV+DD+ +LVG+ S D L +N F
Sbjct: 233 LKPNDTIHKALELLQQNQFTALPVVDDEHELVGIFSLVDFL--------RSVENRKF--- 281
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARL--LLETKYRRLPVVD 215
DS + + K K V M APV +R T++ AR+ LL + Y +P+VD
Sbjct: 282 DSFIALYLHAK----KKAKKEVSQFMNAAPVFMRTDTHI---ARMIPLLTSGYHHIPIVD 334
>gi|227823207|ref|YP_002827179.1| CBS domain-containing protein [Sinorhizobium fredii NGR234]
gi|227342208|gb|ACP26426.1| putative CBS domain protein [Sinorhizobium fredii NGR234]
Length = 223
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 73/135 (54%), Gaps = 18/135 (13%)
Query: 85 VGDFMTTKEELHVVK--PTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS 142
V D MTTK VVK P +V +A +++ + ++G PV+DD +L+G++S+ DL+
Sbjct: 3 VKDVMTTK----VVKLSPDNSVRQAAKLMFDHHVSGVPVVDDGGRLLGVISEGDLIRRTE 58
Query: 143 I-SGSG--RADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDA 199
+ SG+ AD ++ P+ + + + + + VGD+MT PV + E L
Sbjct: 59 LCSGASVLMADMAIDPD--------DRANAFVRRCSWR-VGDVMTANPVTIEEEAPLARV 109
Query: 200 ARLLLETKYRRLPVV 214
A L+ E +R+PV+
Sbjct: 110 AGLMQEHGIKRIPVM 124
>gi|407942444|ref|YP_006858086.1| inosine 5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
jejuni PT14]
gi|419649954|ref|ZP_14181185.1| inosine 5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
jejuni 2008-1025]
gi|419661292|ref|ZP_14191619.1| inosine 5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
jejuni 2008-831]
gi|419677410|ref|ZP_14206560.1| inosine 5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
jejuni 87330]
gi|380629214|gb|EIB47485.1| inosine 5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
jejuni 2008-1025]
gi|380640379|gb|EIB57836.1| inosine 5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
jejuni 2008-831]
gi|380654342|gb|EIB70706.1| inosine 5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
jejuni 87330]
gi|407906282|gb|AFU43111.1| inosine 5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
jejuni PT14]
Length = 485
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 57/122 (46%), Gaps = 33/122 (27%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P +V EALEI+ E RI+G PV+D+D KL+G++++ DL
Sbjct: 99 VSPKASVAEALEIMAEYRISGVPVVDEDKKLIGILTNRDL------------------RF 140
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVR-ETTNLEDAARLLLETKYRRLPVVDA 216
+S + E ++MT P++ + L+DA ++ K +LP+VD
Sbjct: 141 ESDFSNLVE--------------NVMTKMPLITAPKGCTLDDAEKIFSTNKVEKLPIVDE 186
Query: 217 DG 218
G
Sbjct: 187 QG 188
>gi|422857902|ref|ZP_16904552.1| CBS domain protein [Streptococcus sanguinis SK1057]
gi|422859605|ref|ZP_16906249.1| CBS domain protein [Streptococcus sanguinis SK330]
gi|422870375|ref|ZP_16916868.1| CBS domain protein [Streptococcus sanguinis SK1087]
gi|327462076|gb|EGF08405.1| CBS domain protein [Streptococcus sanguinis SK1057]
gi|327470488|gb|EGF15944.1| CBS domain protein [Streptococcus sanguinis SK330]
gi|328946590|gb|EGG40728.1| CBS domain protein [Streptococcus sanguinis SK1087]
Length = 218
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 73/133 (54%), Gaps = 20/133 (15%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT K + + P TT+ A +++ E+++ PVI++D +LVGLV++ +I+
Sbjct: 3 VKDFMTRK--VVYISPNTTIAHAADMMREQKLHRLPVIEND-QLVGLVTE------GTIA 53
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+ + +T + E+ LL+KT VGD+M V + + +LEDA L+L
Sbjct: 54 EASPSK--------ATSLSIYEMNYLLNKTK---VGDVMIRDVVTISQFASLEDATYLML 102
Query: 205 ETKYRRLPVVDAD 217
+ K LPVVD +
Sbjct: 103 KNKIGILPVVDNE 115
>gi|86153015|ref|ZP_01071220.1| inosine-5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
jejuni HB93-13]
gi|88596049|ref|ZP_01099286.1| inosine-5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
jejuni 84-25]
gi|157415319|ref|YP_001482575.1| inositol-5-monophosphate dehydrogenase [Campylobacter jejuni subsp.
jejuni 81116]
gi|317511753|ref|ZP_07969038.1| inosine-5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
jejuni 305]
gi|384441678|ref|YP_005657981.1| Inosine-5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
jejuni M1]
gi|384448307|ref|YP_005656358.1| inosine-5-monophosphate dehydrogenase [Campylobacter jejuni subsp.
jejuni IA3902]
gi|415730621|ref|ZP_11473132.1| inosine-5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
jejuni DFVF1099]
gi|415745419|ref|ZP_11474875.1| inosine-5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
jejuni 327]
gi|419618370|ref|ZP_14151915.1| inosine 5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
jejuni 129-258]
gi|419619269|ref|ZP_14152740.1| inosine 5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
jejuni 51494]
gi|419627161|ref|ZP_14160072.1| inosine 5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
jejuni LMG 23263]
gi|419635822|ref|ZP_14168115.1| inosine 5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
jejuni 55037]
gi|419645022|ref|ZP_14176585.1| inosine 5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
jejuni LMG 9081]
gi|419646512|ref|ZP_14177977.1| inosine 5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
jejuni 53161]
gi|419658153|ref|ZP_14188790.1| inosine 5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
jejuni 1997-1]
gi|419669211|ref|ZP_14199005.1| inosine 5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
jejuni 1997-11]
gi|419673190|ref|ZP_14202668.1| inosine 5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
jejuni 51037]
gi|419674631|ref|ZP_14203918.1| inosine 5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
jejuni 110-21]
gi|419688187|ref|ZP_14216514.1| inosine 5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
jejuni 1854]
gi|419691690|ref|ZP_14219803.1| inosine 5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
jejuni 1928]
gi|85843900|gb|EAQ61110.1| inosine-5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
jejuni HB93-13]
gi|88190890|gb|EAQ94862.1| inosine-5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
jejuni 84-25]
gi|157386283|gb|ABV52598.1| inosine-5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
jejuni 81116]
gi|284926288|gb|ADC28640.1| inosine-5-monophosphate dehydrogenase [Campylobacter jejuni subsp.
jejuni IA3902]
gi|307747961|gb|ADN91231.1| Inosine-5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
jejuni M1]
gi|315927934|gb|EFV07256.1| inosine-5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
jejuni DFVF1099]
gi|315928759|gb|EFV08034.1| inosine-5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
jejuni 305]
gi|315932194|gb|EFV11137.1| inosine-5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
jejuni 327]
gi|380594940|gb|EIB15706.1| inosine 5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
jejuni 129-258]
gi|380602857|gb|EIB23092.1| inosine 5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
jejuni 51494]
gi|380607172|gb|EIB27048.1| inosine 5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
jejuni LMG 23263]
gi|380611664|gb|EIB31208.1| inosine 5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
jejuni 55037]
gi|380620948|gb|EIB39790.1| inosine 5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
jejuni LMG 9081]
gi|380623458|gb|EIB42162.1| inosine 5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
jejuni 53161]
gi|380633747|gb|EIB51677.1| inosine 5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
jejuni 1997-1]
gi|380647874|gb|EIB64763.1| inosine 5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
jejuni 1997-11]
gi|380652912|gb|EIB69368.1| inosine 5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
jejuni 110-21]
gi|380654285|gb|EIB70650.1| inosine 5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
jejuni 51037]
gi|380666054|gb|EIB81608.1| inosine 5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
jejuni 1854]
gi|380671821|gb|EIB87016.1| inosine 5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
jejuni 1928]
Length = 485
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 57/122 (46%), Gaps = 33/122 (27%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P +V EALEI+ E RI+G PV+D+D KL+G++++ DL
Sbjct: 99 VSPKASVAEALEIMAEYRISGVPVVDEDKKLIGILTNRDL------------------RF 140
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVR-ETTNLEDAARLLLETKYRRLPVVDA 216
+S + E ++MT P++ + L+DA ++ K +LP+VD
Sbjct: 141 ESDFSNLVE--------------NVMTKMPLITAPKGCTLDDAEKIFSTNKVEKLPIVDE 186
Query: 217 DG 218
G
Sbjct: 187 QG 188
>gi|386393723|ref|ZP_10078504.1| CBS-domain-containing membrane protein [Desulfovibrio sp. U5L]
gi|385734601|gb|EIG54799.1| CBS-domain-containing membrane protein [Desulfovibrio sp. U5L]
Length = 218
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 70/134 (52%), Gaps = 19/134 (14%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
VGD+M+T ++ V ++ +A I+ EK+I PV+D D +LVG+VS+ DL A
Sbjct: 3 VGDWMST--DVATVTEDVSMIKAGRIMREKKIRRLPVVDRDGRLVGIVSERDLKAAS--- 57
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
P +T + E+ LLS+ + +MT P+ +R + +E AA ++
Sbjct: 58 ----------PSSATTLDMY-EMTYLLSEMK---IKGIMTKNPLSIRRSDTVERAALIMR 103
Query: 205 ETKYRRLPVVDADG 218
+ K+ LPVVD G
Sbjct: 104 DRKFGSLPVVDEAG 117
Score = 38.1 bits (87), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 25/41 (60%)
Query: 178 MVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADG 218
+VGD M+ V E ++ A R++ E K RRLPVVD DG
Sbjct: 2 LVGDWMSTDVATVTEDVSMIKAGRIMREKKIRRLPVVDRDG 42
>gi|67926212|ref|ZP_00519431.1| CBS [Crocosphaera watsonii WH 8501]
gi|67851945|gb|EAM47485.1| CBS [Crocosphaera watsonii WH 8501]
Length = 123
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 68/125 (54%), Gaps = 11/125 (8%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TV MT ++ V P T + EA++I+ EKRI+G PV+D+ KL+G++S+ DL+ +
Sbjct: 4 TVAQVMT--QDPITVTPQTPLSEAVKIIAEKRISGLPVVDEKGKLLGVISETDLMWQE-- 59
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQ--KLLSKTNGKMVGDLMTPAPVVVRETTNLE---D 198
+G +DS N + K + K G+ VG++M+ P+ ++ T +L D
Sbjct: 60 --TGVEPPPYIMILDSVIYLQNPARHDKEIHKALGQTVGEVMSDKPISIKATQSLNWTLD 117
Query: 199 AARLL 203
+LL
Sbjct: 118 KKQLL 122
>gi|435853072|ref|YP_007314391.1| CBS-domain-containing membrane protein [Halobacteroides halobius
DSM 5150]
gi|433669483|gb|AGB40298.1| CBS-domain-containing membrane protein [Halobacteroides halobius
DSM 5150]
Length = 148
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 66/129 (51%), Gaps = 17/129 (13%)
Query: 93 EELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLAL-------DSISG 145
E + V P + E +I++E I+G PVI+DD KLVG++S+ DL+ D I
Sbjct: 9 ENVITVGPKMKIKEVAQIMIENSISGLPVIEDD-KLVGIISEGDLIVKEKKLDLPDYIYV 67
Query: 146 SGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLE 205
G +F ++F++ ++ L K G V DLMT + V +++ D A + +E
Sbjct: 68 LG----GIF-----YLESFDDFEQDLKKMAGIEVADLMTKDVITVGPQSDVMDIATIFVE 118
Query: 206 TKYRRLPVV 214
R+PVV
Sbjct: 119 EGVNRVPVV 127
>gi|419628866|ref|ZP_14161612.1| inosine 5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
jejuni 60004]
gi|419639501|ref|ZP_14171528.1| inosine 5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
jejuni 86605]
gi|380608743|gb|EIB28506.1| inosine 5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
jejuni 60004]
gi|380616255|gb|EIB35466.1| inosine 5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
jejuni 86605]
Length = 485
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 58/122 (47%), Gaps = 33/122 (27%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P +V EALEI+ E RI+G PV+D+D KL+G++++ DL R ++
Sbjct: 99 VSPKASVAEALEIMAEYRISGVPVVDEDKKLIGILTNRDL----------RFESDFL--- 145
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVR-ETTNLEDAARLLLETKYRRLPVVDA 216
+V ++MT P++ + L+DA ++ K +LP+VD
Sbjct: 146 -------------------NLVENVMTKMPLITAPKGCTLDDAEKIFSTNKVEKLPIVDE 186
Query: 217 DG 218
G
Sbjct: 187 QG 188
>gi|419623498|ref|ZP_14156626.1| inosine 5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
jejuni LMG 23218]
gi|419631030|ref|ZP_14163629.1| inosine 5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
jejuni LMG 23264]
gi|419655150|ref|ZP_14186008.1| inosine 5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
jejuni 2008-988]
gi|419663710|ref|ZP_14193901.1| inosine 5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
jejuni 1997-4]
gi|419678793|ref|ZP_14207828.1| inosine 5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
jejuni 87459]
gi|419684313|ref|ZP_14212916.1| inosine 5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
jejuni 1577]
gi|380601020|gb|EIB21343.1| inosine 5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
jejuni LMG 23218]
gi|380611764|gb|EIB31307.1| inosine 5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
jejuni LMG 23264]
gi|380637479|gb|EIB55110.1| inosine 5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
jejuni 2008-988]
gi|380642423|gb|EIB59692.1| inosine 5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
jejuni 1997-4]
gi|380659262|gb|EIB75244.1| inosine 5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
jejuni 87459]
gi|380667200|gb|EIB82668.1| inosine 5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
jejuni 1577]
Length = 485
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 57/122 (46%), Gaps = 33/122 (27%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P +V EALEI+ E RI+G PV+D+D KL+G++++ DL
Sbjct: 99 VSPKASVAEALEIMAEYRISGVPVVDEDKKLIGILTNRDL------------------RF 140
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVR-ETTNLEDAARLLLETKYRRLPVVDA 216
+S + E ++MT P++ + L+DA ++ K +LP+VD
Sbjct: 141 ESDFSNLVE--------------NVMTKMPLITAPKGCTLDDAEKIFSTNKVEKLPIVDE 186
Query: 217 DG 218
G
Sbjct: 187 QG 188
>gi|262197635|ref|YP_003268844.1| hypothetical protein [Haliangium ochraceum DSM 14365]
gi|262080982|gb|ACY16951.1| CBS domain containing membrane protein [Haliangium ochraceum DSM
14365]
Length = 640
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 65/149 (43%), Gaps = 25/149 (16%)
Query: 69 GTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKL 128
G L ++ G TVG FM+T +L V P VD A ++ + I PV DD L
Sbjct: 490 GQLRSDDDWRRHGYRTVGQFMST--DLFTVHPEDLVDLAASVMDWEHIRHVPVEDDHGSL 547
Query: 129 VGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPV 188
VG+++ LL L + G+ L+ ++ V D+M APV
Sbjct: 548 VGIITHRTLLRLMARRGTN-----------------------LAASSPVAVRDIMRVAPV 584
Query: 189 VVRETTNLEDAARLLLETKYRRLPVVDAD 217
V T DA R++ E K LPVVD D
Sbjct: 585 TVSPDTLTIDAIRMMREQKIGCLPVVDGD 613
>gi|423280578|ref|ZP_17259490.1| inosine-5'-monophosphate dehydrogenase [Bacteroides fragilis HMW
610]
gi|424665169|ref|ZP_18102205.1| inosine-5'-monophosphate dehydrogenase [Bacteroides fragilis HMW
616]
gi|404575033|gb|EKA79778.1| inosine-5'-monophosphate dehydrogenase [Bacteroides fragilis HMW
616]
gi|404583785|gb|EKA88458.1| inosine-5'-monophosphate dehydrogenase [Bacteroides fragilis HMW
610]
Length = 491
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 62/121 (51%), Gaps = 31/121 (25%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
+K +TV +AL ++ E +I G PV+DD+ LVG+V++ DL R + +M +
Sbjct: 104 IKQGSTVRDALALMSEYKIGGIPVVDDNRYLVGIVTNRDL----------RFERNMDKRI 153
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
D ++++K N V ++T+LE AA++L K +LPVVD +
Sbjct: 154 D----------EVMTKEN-----------LVTTNQSTDLEAAAQILQHHKIEKLPVVDKE 192
Query: 218 G 218
G
Sbjct: 193 G 193
Score = 38.5 bits (88), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL 137
D + TKE L +T ++ A +IL +I PV+D + KL+GLV+ D+
Sbjct: 154 DEVMTKENLVTTNQSTDLEAAAQILQHHKIEKLPVVDKEGKLIGLVTYKDI 204
>gi|198276171|ref|ZP_03208702.1| hypothetical protein BACPLE_02360 [Bacteroides plebeius DSM 17135]
gi|198270983|gb|EDY95253.1| inosine-5'-monophosphate dehydrogenase [Bacteroides plebeius DSM
17135]
Length = 491
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 63/121 (52%), Gaps = 31/121 (25%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
+K + V +AL+++ E +I G PV+DD+ LVG+V++ DL R + + +
Sbjct: 104 IKRGSVVKDALDLMAEYKIGGIPVVDDENYLVGIVTNRDL----------RFEKDLNKRI 153
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
D ++++K N ++T P T++E A+++L E K +LPVVD D
Sbjct: 154 D----------EVMTKEN------IVTTEP-----GTDMETASKILQENKIEKLPVVDKD 192
Query: 218 G 218
G
Sbjct: 193 G 193
Score = 42.4 bits (98), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 32/51 (62%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL 137
D + TKE + +P T ++ A +IL E +I PV+D D KL+GL++ D+
Sbjct: 154 DEVMTKENIVTTEPGTDMETASKILQENKIEKLPVVDKDGKLIGLITYKDI 204
>gi|86150453|ref|ZP_01068678.1| inosine-5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
jejuni CF93-6]
gi|86151096|ref|ZP_01069312.1| inosine-5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
jejuni 260.94]
gi|121613583|ref|YP_001000738.1| inosine 5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
jejuni 81-176]
gi|218562674|ref|YP_002344453.1| inosine 5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
jejuni NCTC 11168 = ATCC 700819]
gi|315124546|ref|YP_004066550.1| inositol-5-monophosphate dehydrogenase [Campylobacter jejuni subsp.
jejuni ICDCCJ07001]
gi|403055797|ref|YP_006633202.1| inosine 5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
jejuni NCTC 11168-BN148]
gi|419625578|ref|ZP_14158592.1| inosine 5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
jejuni LMG 23223]
gi|419633230|ref|ZP_14165670.1| inosine 5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
jejuni LMG 23269]
gi|419651678|ref|ZP_14182770.1| inosine 5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
jejuni 2008-894]
gi|419659207|ref|ZP_14189746.1| inosine 5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
jejuni 2008-979]
gi|419671265|ref|ZP_14200936.1| inosine 5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
jejuni 1997-14]
gi|419695247|ref|ZP_14223144.1| inosine 5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
jejuni LMG 23210]
gi|85839048|gb|EAQ56312.1| inosine-5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
jejuni CF93-6]
gi|85842266|gb|EAQ59512.1| inosine-5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
jejuni 260.94]
gi|87249094|gb|EAQ72055.1| inosine-5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
jejuni 81-176]
gi|112360380|emb|CAL35176.1| inosine-5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
jejuni NCTC 11168 = ATCC 700819]
gi|315018268|gb|ADT66361.1| inositol-5-monophosphate dehydrogenase [Campylobacter jejuni subsp.
jejuni ICDCCJ07001]
gi|380604617|gb|EIB24625.1| inosine 5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
jejuni LMG 23223]
gi|380612788|gb|EIB32308.1| inosine 5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
jejuni LMG 23269]
gi|380630938|gb|EIB49153.1| inosine 5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
jejuni 2008-894]
gi|380640048|gb|EIB57513.1| inosine 5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
jejuni 2008-979]
gi|380649618|gb|EIB66313.1| inosine 5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
jejuni 1997-14]
gi|380679491|gb|EIB94334.1| inosine 5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
jejuni LMG 23210]
gi|401781449|emb|CCK67153.1| inosine 5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
jejuni NCTC 11168-BN148]
Length = 485
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 57/122 (46%), Gaps = 33/122 (27%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P +V EALEI+ E RI+G PV+D+D KL+G++++ DL
Sbjct: 99 VSPKASVAEALEIMAEYRISGVPVVDEDKKLIGILTNRDL------------------RF 140
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVR-ETTNLEDAARLLLETKYRRLPVVDA 216
+S + E ++MT P++ + L+DA ++ K +LP+VD
Sbjct: 141 ESDFSNLVE--------------NVMTKMPLITAPKGCTLDDAEKIFSTNKVEKLPIVDE 186
Query: 217 DG 218
G
Sbjct: 187 QG 188
>gi|419636781|ref|ZP_14168971.1| inosine 5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
jejuni LMG 9879]
gi|380616807|gb|EIB35996.1| inosine 5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
jejuni LMG 9879]
Length = 485
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 57/122 (46%), Gaps = 33/122 (27%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P +V EALEI+ E RI+G PV+D+D KL+G++++ DL
Sbjct: 99 VSPKASVAEALEIMAEYRISGVPVVDEDKKLIGILTNRDL------------------RF 140
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVR-ETTNLEDAARLLLETKYRRLPVVDA 216
+S + E ++MT P++ + L+DA ++ K +LP+VD
Sbjct: 141 ESDFSNLVE--------------NVMTKMPLITAPKGCTLDDAEKIFSTNKVEKLPIVDE 186
Query: 217 DG 218
G
Sbjct: 187 QG 188
>gi|153952446|ref|YP_001397822.1| inosine 5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
doylei 269.97]
gi|152939892|gb|ABS44633.1| inosine-5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
doylei 269.97]
Length = 485
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 57/122 (46%), Gaps = 33/122 (27%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P +V EALEI+ E RI+G PV+D+D KL+G++++ DL
Sbjct: 99 VSPKASVAEALEIMAEYRISGVPVVDEDKKLIGILTNRDL------------------RF 140
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVR-ETTNLEDAARLLLETKYRRLPVVDA 216
+S + E ++MT P++ + L+DA ++ K +LP+VD
Sbjct: 141 ESDFSNLVE--------------NVMTKMPLITAPKGCTLDDAEKIFSTNKVEKLPIVDE 186
Query: 217 DG 218
G
Sbjct: 187 QG 188
>gi|419653879|ref|ZP_14184836.1| inosine 5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
jejuni 2008-872]
gi|419664800|ref|ZP_14194879.1| inosine 5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
jejuni 1997-7]
gi|419680822|ref|ZP_14209674.1| inosine 5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
jejuni 140-16]
gi|419686062|ref|ZP_14214502.1| inosine 5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
jejuni 1798]
gi|419690220|ref|ZP_14218432.1| inosine 5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
jejuni 1893]
gi|380631978|gb|EIB50110.1| inosine 5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
jejuni 2008-872]
gi|380644480|gb|EIB61662.1| inosine 5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
jejuni 1997-7]
gi|380659524|gb|EIB75499.1| inosine 5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
jejuni 140-16]
gi|380665297|gb|EIB80870.1| inosine 5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
jejuni 1798]
gi|380669261|gb|EIB84550.1| inosine 5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
jejuni 1893]
Length = 485
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 57/122 (46%), Gaps = 33/122 (27%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P +V EALEI+ E RI+G PV+D+D KL+G++++ DL
Sbjct: 99 VSPKASVAEALEIMAEYRISGVPVVDEDKKLIGILTNRDL------------------RF 140
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVR-ETTNLEDAARLLLETKYRRLPVVDA 216
+S + E ++MT P++ + L+DA ++ K +LP+VD
Sbjct: 141 ESDFSNLVE--------------NVMTKMPLITAPKGCTLDDAEKIFSTNKVEKLPIVDE 186
Query: 217 DG 218
G
Sbjct: 187 QG 188
>gi|365893444|ref|ZP_09431621.1| conserved hypothetical protein [Bradyrhizobium sp. STM 3843]
gi|365425843|emb|CCE04163.1| conserved hypothetical protein [Bradyrhizobium sp. STM 3843]
Length = 242
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 60/120 (50%), Gaps = 5/120 (4%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P T + EA I++ + ++G PV+D KLVG+VS+ D + I G+ R +
Sbjct: 14 VTPETPIVEAANIMLTRHVSGLPVVDSAGKLVGVVSEGDFIRRSEI-GTERKRGRWLRFI 72
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
K+ + + +G+ V ++MT AP+ + E T L + ++ +RLPV D
Sbjct: 73 LGPGKSAAD----FVQEHGRKVSEVMTKAPLTITEDTALAEIVDIMERNHVKRLPVTRGD 128
>gi|218297190|ref|ZP_03497852.1| putative signal transduction protein with CBS domains [Thermus
aquaticus Y51MC23]
gi|218242467|gb|EED09006.1| putative signal transduction protein with CBS domains [Thermus
aquaticus Y51MC23]
Length = 150
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 68/138 (49%), Gaps = 15/138 (10%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D MT E +++P T++EA ++E R GFPV+D++ +L+GL+ +LL
Sbjct: 3 VADLMTRAPE--ILRPKATLEEAARKILETRYGGFPVVDEEGRLLGLLQVEELLP----- 55
Query: 145 GSGRADNSMFPEVDS-----TWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDA 199
R +N F +V++ W +Q++ + V +M V L A
Sbjct: 56 ---RPENVPFSDVEALQLFGEWVDEGTLQEIYRRYQSTPVEAVMLKEIPRVHPEDPLGKA 112
Query: 200 ARLLLETKYRRLPVVDAD 217
++LL T+ R LPVVD +
Sbjct: 113 LQVLLTTEVRHLPVVDQE 130
Score = 45.1 bits (105), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 28/40 (70%)
Query: 179 VGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADG 218
V DLMT AP ++R LE+AAR +LET+Y PVVD +G
Sbjct: 3 VADLMTRAPEILRPKATLEEAARKILETRYGGFPVVDEEG 42
>gi|409095026|ref|ZP_11215050.1| inosine 5'-monophosphate dehydrogenase [Thermococcus zilligii AN1]
Length = 485
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 57/126 (45%), Gaps = 35/126 (27%)
Query: 93 EELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNS 152
EE+ + P TVD AL ++ + I G PVI+D K+VG++S D+
Sbjct: 101 EEVISISPEETVDYALFLMEKNDIDGLPVIED-GKVVGVISKKDI--------------- 144
Query: 153 MFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLP 212
+ GK+V D+MT P+ V E+ +A L+ E + RLP
Sbjct: 145 -------------------AVKQGKLVKDVMTAEPITVPESVTTGEALNLMFEHRIDRLP 185
Query: 213 VVDADG 218
VVD +G
Sbjct: 186 VVDGNG 191
>gi|419693693|ref|ZP_14221677.1| inosine 5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
jejuni LMG 9872]
gi|380672314|gb|EIB87487.1| inosine 5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
jejuni LMG 9872]
Length = 485
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 57/122 (46%), Gaps = 33/122 (27%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P +V EALEI+ E RI+G PV+D+D KL+G++++ DL
Sbjct: 99 VSPKASVAEALEIMAEYRISGVPVVDEDKKLIGILTNRDL------------------RF 140
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVR-ETTNLEDAARLLLETKYRRLPVVDA 216
+S + E ++MT P++ + L+DA ++ K +LP+VD
Sbjct: 141 ESDFSNLVE--------------NVMTKMPLITAPKGCTLDDAEKIFSTNKVEKLPIVDE 186
Query: 217 DG 218
G
Sbjct: 187 QG 188
>gi|419560331|ref|ZP_14097975.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli 86119]
gi|419588203|ref|ZP_14124028.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli 317/04]
gi|380537280|gb|EIA61851.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli 86119]
gi|380570627|gb|EIA93046.1| inosine 5'-monophosphate dehydrogenase [Campylobacter coli 317/04]
Length = 484
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 57/122 (46%), Gaps = 33/122 (27%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P +V EALEI+ E RI+G PV+D+D KL+G++++ DL
Sbjct: 99 VSPKASVAEALEIMAEYRISGVPVVDEDKKLIGILTNRDL------------------RF 140
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVR-ETTNLEDAARLLLETKYRRLPVVDA 216
+S + E ++MT P++ + L+DA ++ K +LP+VD
Sbjct: 141 ESDFSNLVE--------------NVMTKMPLITAPKGCTLDDAEKIFSTNKVEKLPIVDE 186
Query: 217 DG 218
G
Sbjct: 187 QG 188
>gi|419640784|ref|ZP_14172703.1| inosine 5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
jejuni LMG 23357]
gi|380618928|gb|EIB38035.1| inosine 5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
jejuni LMG 23357]
Length = 485
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 57/122 (46%), Gaps = 33/122 (27%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P +V EALEI+ E RI+G PV+D+D KL+G++++ DL
Sbjct: 99 VSPKASVAEALEIMAEYRISGVPVVDEDKKLIGILTNRDL------------------RF 140
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVR-ETTNLEDAARLLLETKYRRLPVVDA 216
+S + E ++MT P++ + L+DA ++ K +LP+VD
Sbjct: 141 ESDFSNLVE--------------NVMTKMPLITAPKGCTLDDAEKIFSTNKVEKLPIVDE 186
Query: 217 DG 218
G
Sbjct: 187 QG 188
>gi|57237943|ref|YP_179191.1| inosine 5'-monophosphate dehydrogenase [Campylobacter jejuni
RM1221]
gi|384443413|ref|YP_005659665.1| Inosine-5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
jejuni S3]
gi|424850366|ref|ZP_18274779.1| inosine 5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
jejuni D2600]
gi|57166747|gb|AAW35526.1| inosine-5'-monophosphate dehydrogenase [Campylobacter jejuni
RM1221]
gi|315058500|gb|ADT72829.1| Inosine-5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
jejuni S3]
gi|356487048|gb|EHI17021.1| inosine 5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
jejuni D2600]
Length = 485
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 57/122 (46%), Gaps = 33/122 (27%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P +V EALEI+ E RI+G PV+D+D KL+G++++ DL
Sbjct: 99 VSPKASVAEALEIMAEYRISGVPVVDEDKKLIGILTNRDL------------------RF 140
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVR-ETTNLEDAARLLLETKYRRLPVVDA 216
+S + E ++MT P++ + L+DA ++ K +LP+VD
Sbjct: 141 ESDFSNLVE--------------NVMTKMPLITAPKGCTLDDAEKIFSTNKVEKLPIVDE 186
Query: 217 DG 218
G
Sbjct: 187 QG 188
>gi|419648413|ref|ZP_14179753.1| inosine 5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
jejuni LMG 9217]
gi|380626413|gb|EIB44884.1| inosine 5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
jejuni LMG 9217]
Length = 485
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 57/122 (46%), Gaps = 33/122 (27%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P +V EALEI+ E RI+G PV+D+D KL+G++++ DL
Sbjct: 99 VSPKASVAEALEIMAEYRISGVPVVDEDKKLIGILTNRDL------------------RF 140
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVR-ETTNLEDAARLLLETKYRRLPVVDA 216
+S + E ++MT P++ + L+DA ++ K +LP+VD
Sbjct: 141 ESDFSNLVE--------------NVMTKMPLITAPKGCTLDDAEKIFSTNKVEKLPIVDE 186
Query: 217 DG 218
G
Sbjct: 187 QG 188
>gi|419621644|ref|ZP_14154895.1| inosine 5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
jejuni LMG 23216]
gi|380601653|gb|EIB21963.1| inosine 5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
jejuni LMG 23216]
Length = 485
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 57/122 (46%), Gaps = 33/122 (27%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P +V EALEI+ E RI+G PV+D+D KL+G++++ DL
Sbjct: 99 VSPKASVAEALEIMAEYRISGVPVVDEDKKLIGILTNRDL------------------RF 140
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVR-ETTNLEDAARLLLETKYRRLPVVDA 216
+S + E ++MT P++ + L+DA ++ K +LP+VD
Sbjct: 141 ESDFSNLVE--------------NVMTKMPLITAPKGCTLDDAEKIFSTNKVEKLPIVDE 186
Query: 217 DG 218
G
Sbjct: 187 QG 188
>gi|283956455|ref|ZP_06373935.1| inosine-5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
jejuni 1336]
gi|283792175|gb|EFC30964.1| inosine-5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
jejuni 1336]
Length = 485
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 57/122 (46%), Gaps = 33/122 (27%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P +V EALEI+ E RI+G PV+D+D KL+G++++ DL
Sbjct: 99 VSPKASVAEALEIMAEYRISGVPVVDEDKKLIGILTNRDL------------------RF 140
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVR-ETTNLEDAARLLLETKYRRLPVVDA 216
+S + E ++MT P++ + L+DA ++ K +LP+VD
Sbjct: 141 ESDFSNLVE--------------NVMTKMPLITAPKGCTLDDAEKIFSTNKVEKLPIVDE 186
Query: 217 DG 218
G
Sbjct: 187 QG 188
>gi|389696309|ref|ZP_10183951.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Microvirga sp. WSM3557]
gi|388585115|gb|EIM25410.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Microvirga sp. WSM3557]
Length = 231
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 64/118 (54%), Gaps = 5/118 (4%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V+P+TT+ EA ++++ RI+G PV D LVG++S+ DLL + G+ R S +
Sbjct: 14 VEPSTTIAEAAKLMLADRISGLPVTMRDGTLVGMLSEGDLLRRGEL-GTERKRPSWLEFL 72
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVD 215
+ K +E +++G+ V +M+ PV R +E+ + + +RLPV+D
Sbjct: 73 IGSGKLADE----YVRSHGRKVEQVMSTDPVTTRRDAPIEEIVTAMDRHRIKRLPVID 126
>gi|315506341|ref|YP_004085228.1| cbs domain containing membrane protein [Micromonospora sp. L5]
gi|315412960|gb|ADU11077.1| CBS domain containing membrane protein [Micromonospora sp. L5]
Length = 234
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 67/133 (50%), Gaps = 11/133 (8%)
Query: 83 YTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS 142
+ V D MT ++ V+ T E +++L E+ +T PV+D+ +++G+VS+ DL+
Sbjct: 4 WQVQDVMT--RDVASVREGTDYREIVDVLTERHVTAAPVVDETRRVLGVVSEADLMYKVE 61
Query: 143 ISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARL 202
G R + + P+ ++ +K + DLMT PV + + +AARL
Sbjct: 62 FLGQPR-ERRILPD--------RHRREARAKAGATLAADLMTAPPVTITPDATIVEAARL 112
Query: 203 LLETKYRRLPVVD 215
+ +RLPVV+
Sbjct: 113 MDARGVKRLPVVN 125
>gi|419682514|ref|ZP_14211246.1| inosine 5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
jejuni 1213]
gi|380661475|gb|EIB77371.1| inosine 5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
jejuni 1213]
Length = 485
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 57/122 (46%), Gaps = 33/122 (27%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P +V EALEI+ E RI+G PV+D+D KL+G++++ DL
Sbjct: 99 VSPKASVAEALEIMAEYRISGVPVVDEDKKLIGILTNRDL------------------RF 140
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVR-ETTNLEDAARLLLETKYRRLPVVDA 216
+S + E ++MT P++ + L+DA ++ K +LP+VD
Sbjct: 141 ESDFSNLVE--------------NVMTKMPLITTPKGCTLDDAEKIFSTNKVEKLPIVDE 186
Query: 217 DG 218
G
Sbjct: 187 QG 188
>gi|254380661|ref|ZP_04996027.1| conserved hypothetical protein [Streptomyces sp. Mg1]
gi|194339572|gb|EDX20538.1| conserved hypothetical protein [Streptomyces sp. Mg1]
Length = 216
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 56/121 (46%), Gaps = 11/121 (9%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V PT E + + ++T PV++ + ++VG+VS+ DLL + + P +
Sbjct: 8 VTPTAEFKEIVTAIERWKVTALPVVEGEGRVVGVVSEADLLPKEEF-------HEHRPGM 60
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
+ + SK DLMT V V + L ARL+ E +RLPVVDAD
Sbjct: 61 IEHMRRLADT----SKAGSTCAEDLMTTPAVTVHPSATLPQVARLMAERHIKRLPVVDAD 116
Query: 218 G 218
G
Sbjct: 117 G 117
>gi|301064566|ref|ZP_07204962.1| CBS domain protein [delta proteobacterium NaphS2]
gi|300441314|gb|EFK05683.1| CBS domain protein [delta proteobacterium NaphS2]
Length = 149
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 70/138 (50%), Gaps = 18/138 (13%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGS 146
D MTT E+ VK T + E EIL + RI G PV+DD+ L+G++ + DL+
Sbjct: 6 DIMTT--EVITVKKETPLKELAEILYKNRINGVPVVDDEGLLIGIICESDLV-------- 55
Query: 147 GRADNSM-FPEVDSTW------KTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDA 199
R D + P V + + ++ ++K + + N V +L + V V E T +++
Sbjct: 56 -RKDKKLHIPTVVALFDAVFYLESSKNIEKEIKRINATTVEELFSRKVVTVDEKTPIDEI 114
Query: 200 ARLLLETKYRRLPVVDAD 217
A ++ + K +PV+D +
Sbjct: 115 ATIMTQKKVYTIPVMDGN 132
>gi|347753627|ref|YP_004861192.1| CBS domain-containing membrane protein [Bacillus coagulans 36D1]
gi|347586145|gb|AEP02412.1| CBS domain containing membrane protein [Bacillus coagulans 36D1]
Length = 153
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 69/135 (51%), Gaps = 7/135 (5%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFM ++ VK TT+ E L++L RI G PV+D + KL+G++SD D++ +
Sbjct: 3 VKDFMI--RDVITVKKETTIRELLKVLAHHRIGGVPVVDAEGKLLGMISDGDVIRF--LQ 58
Query: 145 GSGRADNSMFPE-VDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
R + V + + FNE KL+ + + + VR + E+A R+L
Sbjct: 59 PKARTVYDFYITIVVNEQEDFNE--KLVHSLDFPVEKIMKRRELYTVRPEDDFENALRIL 116
Query: 204 LETKYRRLPVVDADG 218
+ +++LPVV+ G
Sbjct: 117 AKHHFKKLPVVNQAG 131
>gi|444913606|ref|ZP_21233756.1| CBS domain protein [Cystobacter fuscus DSM 2262]
gi|444715730|gb|ELW56594.1| CBS domain protein [Cystobacter fuscus DSM 2262]
Length = 290
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 75/167 (44%), Gaps = 25/167 (14%)
Query: 56 VSALRRSSAVFASGTLTANSA-----APSSGVYTVGDFMTTKEELHVVKPTTTVDEALEI 110
V A +R + G L A A AP D + T E + P T++EA +
Sbjct: 109 VDASKRMVGILTDGDLLAAMAGEHLSAPGDPWELPVDMLMTHEPF-ALGPDATLEEAAGV 167
Query: 111 LVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKL 170
L++ + PV+DDD +LVG++S+ DL + + GS R E + EV+
Sbjct: 168 LIDADVRHLPVVDDDERLVGILSERDL--RERLGGSAR-------EWPRAARQALEVR-- 216
Query: 171 LSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
+G+ MTP P+ +R ++ A + + + +PVVD D
Sbjct: 217 --------LGEAMTPDPLALRSGASVAQALEIFTDERVGAIPVVDED 255
Score = 38.5 bits (88), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 27/37 (72%)
Query: 102 TTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 138
+V +ALEI ++R+ PV+D+D +L+G++S DLL
Sbjct: 232 ASVAQALEIFTDERVGAIPVVDEDERLLGILSYIDLL 268
>gi|410463616|ref|ZP_11317120.1| CBS-domain-containing membrane protein [Desulfovibrio magneticus
str. Maddingley MBC34]
gi|409983278|gb|EKO39663.1| CBS-domain-containing membrane protein [Desulfovibrio magneticus
str. Maddingley MBC34]
Length = 218
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 67/131 (51%), Gaps = 19/131 (14%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
VGD+M+T ++ ++ +A I+ E++I PV+D D KLVG+VS+ DL A S
Sbjct: 3 VGDWMST--DVATATEDVSMIKAGRIMRERKIRRLPVVDKDGKLVGIVSERDLKAASPSS 60
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+T E+ LLS+ K + MT PV +R T +E AA ++
Sbjct: 61 --------------ATSLDMYEMTYLLSELKVKAI---MTKDPVRIRRTDTVERAALIMR 103
Query: 205 ETKYRRLPVVD 215
+ K+ LPVVD
Sbjct: 104 DRKFGSLPVVD 114
>gi|291296715|ref|YP_003508113.1| hypothetical protein [Meiothermus ruber DSM 1279]
gi|290471674|gb|ADD29093.1| CBS domain containing protein [Meiothermus ruber DSM 1279]
Length = 145
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 68/130 (52%), Gaps = 20/130 (15%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT + VV P V EA +I+ + PV+++ +LVG+V+D DL
Sbjct: 3 VKDFMTPDPQ--VVTPDVAVPEAAQIMKKGGFRRLPVVEEG-RLVGIVTDRDL------- 52
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
P D+T + E+ L+S+ + VG++MT P+ V +T L+ AA+L+L
Sbjct: 53 ------KEAMPS-DATSLSIWEINYLISRLS---VGEIMTRDPISVADTLPLQAAAKLML 102
Query: 205 ETKYRRLPVV 214
E K LPVV
Sbjct: 103 EYKVGGLPVV 112
>gi|440699107|ref|ZP_20881412.1| CBS domain protein [Streptomyces turgidiscabies Car8]
gi|440278413|gb|ELP66451.1| CBS domain protein [Streptomyces turgidiscabies Car8]
Length = 221
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 70/142 (49%), Gaps = 17/142 (11%)
Query: 79 SSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 138
SS +V D MT + V + + ++++ + +++ PV++ + +++G+VS+ DLL
Sbjct: 2 SSSPRSVSDVMT--HTVVAVGRDASFKDIVKLMEQWKVSALPVLEGEGRVIGVVSEADLL 59
Query: 139 ALDSISGSGRADNSMFPEVDSTWKTFNEVQKL--LSKTNGKMVGDLMTPAPVVVRETTNL 196
+ DS F ++ +L L+K G DLM + V L
Sbjct: 60 PKEEFR-------------DSDPDRFTQLSRLSDLAKAGGLTAADLMNAPAITVHADATL 106
Query: 197 EDAARLLLETKYRRLPVVDADG 218
AAR++ + K +RLPVV+A+G
Sbjct: 107 AQAARIMAQRKVKRLPVVNAEG 128
>gi|357061469|ref|ZP_09122221.1| inosine-5'-monophosphate dehydrogenase [Alloprevotella rava F0323]
gi|355373957|gb|EHG21260.1| inosine-5'-monophosphate dehydrogenase [Alloprevotella rava F0323]
Length = 493
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 57/117 (48%), Gaps = 33/117 (28%)
Query: 102 TTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTW 161
+TV AL+++ E I G PV+DD+ LVG+V++ DL R +N + +V+
Sbjct: 110 STVGGALQLMTEYHIGGIPVVDDEMHLVGIVTNRDL----------RFENDLQKKVE--- 156
Query: 162 KTFNEVQKLLSKTNGKMVGDLMTPAPVV-VRETTNLEDAARLLLETKYRRLPVVDAD 217
D+MT +V + T+L AAR+L E K +LPVVD +
Sbjct: 157 -------------------DVMTKENLVTTTQQTDLAGAARILQENKIEKLPVVDTE 194
>gi|421587439|ref|ZP_16032841.1| hypothetical protein RCCGEPOP_02431 [Rhizobium sp. Pop5]
gi|403708085|gb|EJZ22890.1| hypothetical protein RCCGEPOP_02431 [Rhizobium sp. Pop5]
Length = 257
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 62/113 (54%), Gaps = 5/113 (4%)
Query: 103 TVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWK 162
+V EA +++++ RI+G PV+D + LVG+VS+ D L ++ + R + + S K
Sbjct: 36 SVAEAAQLMLDNRISGLPVVDTNGALVGIVSEGDFLRRSELN-TQRNRPWLLDWLTSPGK 94
Query: 163 TFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVD 215
E +T+G+ V ++MT + T ++ DA RL+ +RLPVV+
Sbjct: 95 IATE----YVRTHGRRVDEVMTSPVSAIAPTASVSDAVRLMERYDIKRLPVVE 143
>gi|209517837|ref|ZP_03266671.1| CBS domain containing membrane protein [Burkholderia sp. H160]
gi|209501670|gb|EEA01692.1| CBS domain containing membrane protein [Burkholderia sp. H160]
Length = 230
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 60/115 (52%), Gaps = 3/115 (2%)
Query: 100 PTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDS 159
P T+ +A ++ V+ I G PV+D + +++G+VS DLL +G+GR + E+ S
Sbjct: 16 PDMTIHDAAKLFVDHHIGGMPVLDANGRVIGIVSQGDLLHRVE-TGTGRGKRRWWLELLS 74
Query: 160 TWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVV 214
+ + E K +G +VGD+M + + E L A L+ +R+PV+
Sbjct: 75 S--SAREQAARYVKEHGHIVGDVMCDNVISIPEDMPLNQIADLMGRRHLKRVPVL 127
>gi|85373724|ref|YP_457786.1| hypothetical protein ELI_04485 [Erythrobacter litoralis HTCC2594]
gi|341615026|ref|ZP_08701895.1| CBS [Citromicrobium sp. JLT1363]
gi|84786807|gb|ABC62989.1| CBS [Erythrobacter litoralis HTCC2594]
Length = 147
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 56/122 (45%), Gaps = 27/122 (22%)
Query: 97 VVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPE 156
P+T+V EA ++V+ PV+DD LVG+++D D +A ++ +D S
Sbjct: 13 CCNPSTSVREAANLMVKNDCGEIPVVDDSGTLVGVITDRD-IACRCVADGKSSDTS---- 67
Query: 157 VDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDA 216
V D+MT +P+ V T+++D + + K RRLPVVD
Sbjct: 68 ----------------------VEDVMTSSPITVTPDTSVDDCRSKMEDNKVRRLPVVDE 105
Query: 217 DG 218
G
Sbjct: 106 SG 107
>gi|399035557|ref|ZP_10732972.1| CBS domain-containing protein [Rhizobium sp. CF122]
gi|398066688|gb|EJL58247.1| CBS domain-containing protein [Rhizobium sp. CF122]
Length = 218
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 66/136 (48%), Gaps = 26/136 (19%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISG- 145
D M T ++ + ++V +A++++V K I+G PVID+D L GL+++ DL+ G
Sbjct: 5 DIMNT--DITTISADSSVHQAIDLMVAKNISGLPVIDNDGNLCGLLTEGDLMRRIEFGGG 62
Query: 146 --SGRADNSMFPEVDS-----TWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLED 198
+G DN+ + D +W+ F D+M+ + + V T
Sbjct: 63 RSAGNPDNTSLVDFDDYIRSRSWRVF----------------DVMSASVISVTPETPAAA 106
Query: 199 AARLLLETKYRRLPVV 214
A ++ + K +R+PVV
Sbjct: 107 VAEVMFQHKIKRVPVV 122
>gi|225352070|ref|ZP_03743093.1| hypothetical protein BIFPSEUDO_03679 [Bifidobacterium
pseudocatenulatum DSM 20438 = JCM 1200]
gi|225157317|gb|EEG70656.1| hypothetical protein BIFPSEUDO_03679 [Bifidobacterium
pseudocatenulatum DSM 20438 = JCM 1200]
Length = 330
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 75/156 (48%), Gaps = 29/156 (18%)
Query: 72 TANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGL 131
+A P+ V TV D M + +++ V V +A+ +++EK I+G P++DD+ +VG
Sbjct: 166 SAQQHVPALDVKTVADVM--QHDVYTVASDAEVRDAVRMMLEKNISGMPIVDDERHVVGF 223
Query: 132 VSDYDLL---ALDS---------ISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMV 179
+SD D+L A D+ ++G R + FPE+ V + +K
Sbjct: 224 ISDSDVLRRFAQDNAPVSDISTLVTGMARGE---FPELSHAELLDMNVMVIAAK------ 274
Query: 180 GDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVD 215
PA V V+ N+ ++ +Y+++PVV+
Sbjct: 275 -----PA-VTVQSDANIAQVCQMFGYQQYKKVPVVE 304
>gi|365880586|ref|ZP_09419947.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 375]
gi|365291335|emb|CCD92478.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 375]
Length = 249
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 58/133 (43%), Gaps = 31/133 (23%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA-------------LDSIS 144
V P T V EA I++ I G PVID +LVG+V+D D L LD +
Sbjct: 14 VTPGTPVAEAARIMLRNHIGGLPVIDAAGRLVGMVTDGDFLRRAELGTERRQGRWLDLLV 73
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
G GR + ++G+ VGD+M+ V V +L + A L+
Sbjct: 74 GRGR------------------IGADFVHSHGRTVGDIMSRPAVTVSTDASLAEIAELME 115
Query: 205 ETKYRRLPVVDAD 217
+ +RLPV+ D
Sbjct: 116 KRSIKRLPVMSGD 128
>gi|451337193|ref|ZP_21907741.1| Inosine-5'-monophosphate dehydrogenase [Amycolatopsis azurea DSM
43854]
gi|449420152|gb|EMD25654.1| Inosine-5'-monophosphate dehydrogenase [Amycolatopsis azurea DSM
43854]
Length = 201
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 55/119 (46%), Gaps = 17/119 (14%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P TT A E+L E T PV+DDD +L+G+V++ DL+ FP+
Sbjct: 14 VTPETTAKHAAEVLAEHGFTALPVVDDDERLIGIVTEADLI------------RDRFPDD 61
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDA 216
+ K Q G V ++MT + ++L + R LL+ + R +P+VD
Sbjct: 62 IRSAK-----QPSGQAAPGATVAEVMTTPVTGMSAGSDLAEVGRALLDGRIRAMPIVDG 115
>gi|311746125|ref|ZP_07719910.1| polyA polymerase family protein [Algoriphagus sp. PR1]
gi|126576346|gb|EAZ80624.1| polyA polymerase family protein [Algoriphagus sp. PR1]
Length = 153
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 64/147 (43%), Gaps = 25/147 (17%)
Query: 68 SGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWK 127
G A + V D M+TK L P T+D LE+L +++I+G PV+D+
Sbjct: 6 QGVRMAEPKKSPAAPILVKDHMSTK--LVTFLPDDTIDMVLEVLTKRKISGAPVVDESGS 63
Query: 128 LVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAP 187
LVG++S+ D L + I G + K K M D++T P
Sbjct: 64 LVGIISEVDCLK-EIIKGK-----------------YTNTPKFPGKVKDHMSVDVITLGP 105
Query: 188 VVVRETTNLEDAARLLLETKYRRLPVV 214
++ DAA+ LE K RR PV+
Sbjct: 106 -----ELSIFDAAQKFLELKIRRFPVI 127
>gi|323529296|ref|YP_004231448.1| putative signal transduction protein with CBS domains [Burkholderia
sp. CCGE1001]
gi|407710136|ref|YP_006794000.1| hypothetical protein BUPH_01568 [Burkholderia phenoliruptrix
BR3459a]
gi|323386298|gb|ADX58388.1| putative signal transduction protein with CBS domains [Burkholderia
sp. CCGE1001]
gi|407238819|gb|AFT89017.1| hypothetical protein BUPH_01568 [Burkholderia phenoliruptrix
BR3459a]
Length = 229
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 60/130 (46%), Gaps = 7/130 (5%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGS 146
D MT K + V P T+ E + VE I+G PV+D D + G++S+ DLL I
Sbjct: 5 DVMTGK--VISVTPDMTIREVARLFVENHISGAPVLDSDGSVAGMISEGDLLRRSEIGTD 62
Query: 147 GRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLET 206
R S W +E + + KT+ V D+MT V V T L + A +L
Sbjct: 63 ERKRTSWL----DFWSASHEARDYV-KTHAAKVSDVMTTNVVTVGPDTPLGEVAGVLETR 117
Query: 207 KYRRLPVVDA 216
+R+PV A
Sbjct: 118 HIKRVPVTKA 127
>gi|422855005|ref|ZP_16901663.1| CBS domain protein [Streptococcus sanguinis SK1]
gi|422861990|ref|ZP_16908622.1| CBS domain protein [Streptococcus sanguinis SK408]
gi|422864959|ref|ZP_16911584.1| CBS domain protein [Streptococcus sanguinis SK1058]
gi|327462982|gb|EGF09303.1| CBS domain protein [Streptococcus sanguinis SK1]
gi|327474585|gb|EGF19990.1| CBS domain protein [Streptococcus sanguinis SK408]
gi|327490143|gb|EGF21931.1| CBS domain protein [Streptococcus sanguinis SK1058]
Length = 218
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 73/133 (54%), Gaps = 20/133 (15%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT K + + P TT+ A +++ E+++ PVI++D +LVGLV++ +I+
Sbjct: 3 VKDFMTRK--VVYISPDTTIAHAADMMREQKLHRLPVIEND-QLVGLVTE------GTIA 53
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+ + +T + E+ LL+KT VGD+M V + + +LEDA L+L
Sbjct: 54 EASPSK--------ATSLSIYEMNYLLNKTK---VGDVMIRDVVTISQFASLEDATYLML 102
Query: 205 ETKYRRLPVVDAD 217
+ K LPVVD +
Sbjct: 103 KNKIGILPVVDNE 115
>gi|456386465|gb|EMF52001.1| hypothetical protein SBD_6523 [Streptomyces bottropensis ATCC
25435]
Length = 242
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 63/136 (46%), Gaps = 7/136 (5%)
Query: 82 VYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALD 141
++TVGD MT +E+ T + + +L RI+G PV+D D K+VG+VS DL+
Sbjct: 9 IHTVGDVMT--DEVVQAHRETPFKDVVRLLDAHRISGMPVVDHDDKVVGVVSGTDLVRGQ 66
Query: 142 SISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAAR 201
+ GR D + + + G+LM+ + V + +AAR
Sbjct: 67 AARADGRLDRRH-----RMPRLRRPGHRAAAGVFATTAGELMSTPAITVHPEQPVPEAAR 121
Query: 202 LLLETKYRRLPVVDAD 217
++ RLPVVD +
Sbjct: 122 VMERHGIERLPVVDEE 137
>gi|421451733|ref|ZP_15901094.1| Acetoin utilization acuB protein [Streptococcus salivarius K12]
gi|400182164|gb|EJO16426.1| Acetoin utilization acuB protein [Streptococcus salivarius K12]
Length = 219
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 69/133 (51%), Gaps = 20/133 (15%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT + + V P TTV A +I+ +K + PVI+ D KLVGLV++ +
Sbjct: 3 VKDFMTKR--VVYVSPETTVAAAADIMRDKGLRRLPVIEHD-KLVGLVTEGTM------- 52
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
A S +T + E+ LL+KT VGD+M + V + +LEDA ++L
Sbjct: 53 --AEASPS-----KATSLSIYEMNYLLNKTK---VGDIMIKNVLTVSKYASLEDAIYIML 102
Query: 205 ETKYRRLPVVDAD 217
+ K LPVVD D
Sbjct: 103 QNKVGVLPVVDND 115
Score = 40.0 bits (92), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 52/92 (56%), Gaps = 4/92 (4%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL-ALDSI 143
VGD M + + V ++++A+ I+++ ++ PV+D+D ++ G+++D D+ A I
Sbjct: 77 VGDIMI--KNVLTVSKYASLEDAIYIMLQNKVGVLPVVDND-QISGIITDKDVFRAFLEI 133
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTN 175
SG G+A + EV T + ++ L++ N
Sbjct: 134 SGYGQAGIRIGLEVTDTPRVLEKIANLIASEN 165
>gi|189425586|ref|YP_001952763.1| hypothetical protein Glov_2529 [Geobacter lovleyi SZ]
gi|189421845|gb|ACD96243.1| CBS domain containing membrane protein [Geobacter lovleyi SZ]
Length = 149
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 68/138 (49%), Gaps = 16/138 (11%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TV + MT +E+ V TT+ E E+ V RI+ PV+D L+G+V++ DL+
Sbjct: 3 TVAEIMT--KEVLTVGTETTIRELAELFVTHRISSLPVVDAAGALIGIVTESDLVE---- 56
Query: 144 SGSGRADNSMFPEVDST--WKTFNE----VQKLLSKTNGKMVGDLMTPAPVVVRETTNLE 197
++ + P V S W + E ++K L K G+ V D+ P V + T +L
Sbjct: 57 ----QSKSVHLPTVISLFDWVIYLESEKTLEKELKKMGGRTVADIYQPEAVSIAPTASLS 112
Query: 198 DAARLLLETKYRRLPVVD 215
+AA L+ +PV++
Sbjct: 113 EAADLMSAHHTNAVPVLE 130
>gi|281423986|ref|ZP_06254899.1| inosine-5'-monophosphate dehydrogenase [Prevotella oris F0302]
gi|281401911|gb|EFB32742.1| inosine-5'-monophosphate dehydrogenase [Prevotella oris F0302]
Length = 494
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 61/120 (50%), Gaps = 31/120 (25%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
++ +TV +ALE++ + I G PV+DDD KLVG+V++ DL R + M ++
Sbjct: 105 IRRGSTVKDALELMHDYHIGGIPVVDDDNKLVGIVTNRDL----------RFERRMDKKI 154
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
D ++++K N V + T+L AA++L E K +LPVVD +
Sbjct: 155 D----------EVMTKEN-----------LVTTHQQTDLVAAAQILQENKIEKLPVVDKN 193
>gi|422875867|ref|ZP_16922337.1| CBS domain protein [Streptococcus sanguinis SK1056]
gi|332362303|gb|EGJ40103.1| CBS domain protein [Streptococcus sanguinis SK1056]
Length = 218
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 73/133 (54%), Gaps = 20/133 (15%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT K + + P TT+ A +++ E+++ PVI++D +LVGLV++ +I+
Sbjct: 3 VKDFMTRK--VVYISPDTTIAHAADMMREQKLHRLPVIEND-QLVGLVTE------GTIA 53
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+ + +T + E+ LL+KT VGD+M V + + +LEDA L+L
Sbjct: 54 EASPSK--------ATSLSIYEMNYLLNKTK---VGDVMIRDVVTISQFASLEDATYLML 102
Query: 205 ETKYRRLPVVDAD 217
+ K LPVVD +
Sbjct: 103 KNKIGILPVVDNE 115
>gi|125718523|ref|YP_001035656.1| hypothetical protein SSA_1724 [Streptococcus sanguinis SK36]
gi|125498440|gb|ABN45106.1| CBS domain protein, putative [Streptococcus sanguinis SK36]
Length = 218
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 73/133 (54%), Gaps = 20/133 (15%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT K + + P TT+ A +++ E+++ PVI++D +LVGLV++ +I+
Sbjct: 3 VKDFMTRK--VVYISPDTTIAHAADMMREQKLHRLPVIEND-QLVGLVTE------GTIA 53
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+ + +T + E+ LL+KT VGD+M V + + +LEDA L+L
Sbjct: 54 EASPSK--------ATSLSIYEMNYLLNKTK---VGDVMIRDVVTISQFASLEDATYLML 102
Query: 205 ETKYRRLPVVDAD 217
+ K LPVVD +
Sbjct: 103 KNKIGILPVVDNE 115
>gi|422882791|ref|ZP_16929247.1| CBS domain protein [Streptococcus sanguinis SK355]
gi|332358281|gb|EGJ36107.1| CBS domain protein [Streptococcus sanguinis SK355]
Length = 218
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 73/133 (54%), Gaps = 20/133 (15%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT K + + P TT+ A +++ E+++ PVI++D +LVGLV++ +I+
Sbjct: 3 VKDFMTRK--VVYISPDTTIAHAADMMREQKLHRLPVIEND-QLVGLVTE------GTIA 53
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+ + +T + E+ LL+KT VGD+M V + + +LEDA L+L
Sbjct: 54 EASPSK--------ATSLSIYEMNYLLNKTK---VGDVMIRDVVTISQFASLEDATYLML 102
Query: 205 ETKYRRLPVVDAD 217
+ K LPVVD +
Sbjct: 103 KNKIGILPVVDNE 115
>gi|289192110|ref|YP_003458051.1| signal transduction protein with CBS domains [Methanocaldococcus
sp. FS406-22]
gi|288938560|gb|ADC69315.1| putative signal transduction protein with CBS domains
[Methanocaldococcus sp. FS406-22]
Length = 154
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 66/120 (55%), Gaps = 9/120 (7%)
Query: 106 EALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPE----VDSTW 161
+ +++ E +I+G PV++ D KLVG++S+ D++ +I N + P ++
Sbjct: 21 DVIKLFRENKISGAPVLNKDGKLVGIISESDIVK--TIVTHNEDLNLILPSPLDLIELPL 78
Query: 162 KTFNEVQKLLSKTNGKM---VGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADG 218
+T ++++ + + V D+MT +V + + DAA+L++E +RLPVVD +G
Sbjct: 79 RTALKIEEFMEDLKNALKTKVRDVMTRKVIVAKPDMTINDAAKLMVENNIKRLPVVDDEG 138
Score = 40.4 bits (93), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 35/54 (64%), Gaps = 2/54 (3%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 138
V D MT K + V KP T+++A +++VE I PV+DD+ L+G+V+ DL+
Sbjct: 99 VRDVMTRK--VIVAKPDMTINDAAKLMVENNIKRLPVVDDEGNLIGIVTRGDLI 150
>gi|237653620|ref|YP_002889934.1| signal transduction protein with CBS domains [Thauera sp. MZ1T]
gi|237624867|gb|ACR01557.1| putative signal transduction protein with CBS domains [Thauera sp.
MZ1T]
Length = 217
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 63/130 (48%), Gaps = 18/130 (13%)
Query: 89 MTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGR 148
+ T+E LHV P + + EI+ K++ PVID D K++G++S D+ R
Sbjct: 6 IMTREVLHV-GPEASFSQVSEIMRLKKVRHVPVIDQDRKVLGIISHRDV---------QR 55
Query: 149 ADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKY 208
A SM +D EV+ LLSK D+M + V T +E+AAR++ K
Sbjct: 56 AQPSMITTLD-----VGEVKYLLSKITA---ADIMHKSVVSCSPRTQIEEAARMMRPKKL 107
Query: 209 RRLPVVDADG 218
L VVD G
Sbjct: 108 GCLVVVDDAG 117
>gi|418017201|ref|ZP_12656760.1| acetoin utilization protein acuB [Streptococcus salivarius M18]
gi|345527894|gb|EGX31202.1| acetoin utilization protein acuB [Streptococcus salivarius M18]
Length = 219
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 69/133 (51%), Gaps = 20/133 (15%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT + + V P TTV A +I+ +K + PVI+ D KLVGLV++ +
Sbjct: 3 VKDFMTKR--VVYVSPETTVAAAADIMRDKGLRRLPVIEHD-KLVGLVTEGTM------- 52
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
A S +T + E+ LL+KT VGD+M + V + +LEDA ++L
Sbjct: 53 --AEASPS-----KATSLSIYEMNYLLNKTK---VGDIMIKNVLTVSKYASLEDAIYIML 102
Query: 205 ETKYRRLPVVDAD 217
+ K LPVVD D
Sbjct: 103 QNKVGVLPVVDND 115
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 52/92 (56%), Gaps = 4/92 (4%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL-ALDSI 143
VGD M + + V ++++A+ I+++ ++ PV+D+D ++ G+++D D+ A I
Sbjct: 77 VGDIMI--KNVLTVSKYASLEDAIYIMLQNKVGVLPVVDND-QISGIITDKDVFRAFLEI 133
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTN 175
SG G+A + EV T + ++ L++ N
Sbjct: 134 SGYGQAGIRIGLEVPDTPRVLEKIANLIASEN 165
>gi|146343631|ref|YP_001208679.1| hypothetical protein BRADO6870 [Bradyrhizobium sp. ORS 278]
gi|146196437|emb|CAL80464.1| conserved hypothetical protein with CBS domain [Bradyrhizobium sp.
ORS 278]
Length = 249
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 59/133 (44%), Gaps = 31/133 (23%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA-------------LDSIS 144
V P T V EA I++ I G PVID +LVG+V+D D L LD +
Sbjct: 14 VTPGTPVAEAARIMLRNHIGGLPVIDASGRLVGMVTDGDFLRRAELGTERKQGRWLDLLV 73
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
G GR + ++G+ VGD+M+ V V +L + A ++
Sbjct: 74 GRGR------------------IGADFVHSHGRTVGDIMSRPAVTVGTDASLAEIAEVME 115
Query: 205 ETKYRRLPVVDAD 217
+ +RLPV++ D
Sbjct: 116 KRSIKRLPVMNGD 128
>gi|225181720|ref|ZP_03735159.1| CBS domain containing membrane protein [Dethiobacter alkaliphilus
AHT 1]
gi|225167591|gb|EEG76403.1| CBS domain containing membrane protein [Dethiobacter alkaliphilus
AHT 1]
Length = 153
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 66/134 (49%), Gaps = 16/134 (11%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGS 146
+ MTT +L + T+ E ++++VE+ I+G PVID+ L+G+VS+ D++ L
Sbjct: 5 EIMTT--DLVTIAEDKTLREVIKLMVEQNISGIPVIDETGNLMGIVSESDVIRL------ 56
Query: 147 GRADNSMFPEVDSTWKTFNEVQ------KLLSKTNGKMVGDLMTPAPVVVRETTNLEDAA 200
+ M + NE Q ++ N V D MT V V+E T L +
Sbjct: 57 -KRKTHMPDYIQLLEAMLNEAQPEQFSADVIRSLNMP-VKDFMTKKVVTVKEDTTLAEIT 114
Query: 201 RLLLETKYRRLPVV 214
RL++E R+PVV
Sbjct: 115 RLMVEHNINRIPVV 128
>gi|108803646|ref|YP_643583.1| signal transduction protein [Rubrobacter xylanophilus DSM 9941]
gi|108764889|gb|ABG03771.1| putative signal transduction protein with CBS domains [Rubrobacter
xylanophilus DSM 9941]
Length = 160
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 73/137 (53%), Gaps = 11/137 (8%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS- 142
TVGD M + + P TV+ A+ + E I+G PV++D +LVG+V++ DL+ D+
Sbjct: 10 TVGDVMHA--DWPTLGPEDTVERAIRLFAESHISGAPVLEDG-RLVGIVTEGDLIFRDAE 66
Query: 143 ISGSGRAD--NSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAA 200
I G D + P +W+ + E + L K+ G VG++MT V V T L +AA
Sbjct: 67 IKAPGFLDILGGIIPL--GSWEEYRE-ETL--KSAGVTVGEVMTRDVVTVSPQTPLPEAA 121
Query: 201 RLLLETKYRRLPVVDAD 217
+ + + LPVV+ +
Sbjct: 122 TAMARRRIKLLPVVEGE 138
Score = 37.0 bits (84), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 79 SSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 138
S+GV TVG+ MT ++ V P T + EA + +RI PV++ + L G++S D+L
Sbjct: 95 SAGV-TVGEVMT--RDVVTVSPQTPLPEAATAMARRRIKLLPVVEGERLLRGVISRMDIL 151
Query: 139 ALDSI 143
AL I
Sbjct: 152 ALHVI 156
>gi|424845877|ref|ZP_18270478.1| inosine 5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
jejuni NW]
gi|356486560|gb|EHI16543.1| inosine 5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
jejuni NW]
Length = 485
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 56/122 (45%), Gaps = 33/122 (27%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P +V EALEI+ E RI+G PV+D D KL+G++++ DL
Sbjct: 99 VSPKASVAEALEIMAEYRISGVPVVDKDKKLIGILTNRDL------------------RF 140
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVR-ETTNLEDAARLLLETKYRRLPVVDA 216
+S + E ++MT P++ + L+DA ++ K +LP+VD
Sbjct: 141 ESDFSNLVE--------------NVMTKMPLITAPKGCTLDDAEKIFSTNKVEKLPIVDE 186
Query: 217 DG 218
G
Sbjct: 187 QG 188
>gi|170741756|ref|YP_001770411.1| hypothetical protein M446_3596 [Methylobacterium sp. 4-46]
gi|168196030|gb|ACA17977.1| CBS domain containing membrane protein [Methylobacterium sp. 4-46]
Length = 241
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 60/123 (48%), Gaps = 13/123 (10%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V+P T + I VEKRI+ PV+D+ LVG+VS+ DLL ++ R
Sbjct: 14 VRPETPLGALARIFVEKRISAAPVVDESGALVGIVSEGDLLHRAELATDRR--------- 64
Query: 158 DSTW-KTFNEVQKL---LSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPV 213
S+W + F ++ L + +G+ V D+M V T L + +L RR+P+
Sbjct: 65 RSSWLRFFASIETLAHEYREAHGRTVRDVMASPVVTATPDTPLPEIVEILERRHIRRVPI 124
Query: 214 VDA 216
V+A
Sbjct: 125 VEA 127
>gi|260771378|ref|ZP_05880304.1| CBS domain containing membrane protein [Vibrio furnissii CIP
102972]
gi|260613694|gb|EEX38887.1| CBS domain containing membrane protein [Vibrio furnissii CIP
102972]
Length = 357
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 57/118 (48%), Gaps = 16/118 (13%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
+KP T+ +ALE+L + + T PV+DD+ +LVG+ S D L +N F
Sbjct: 233 LKPNDTIHKALELLQQNQFTALPVVDDEHELVGIFSLVDFL--------RSVENRKF--- 281
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVD 215
DS + + + K K V M APV +R T++ LL + Y +P+VD
Sbjct: 282 DSFIALYLQAK----KKAMKEVSQFMNAAPVFMRTDTHIARTIP-LLTSGYHHIPIVD 334
>gi|345021259|ref|ZP_08784872.1| CBS domain containing membrane protein [Ornithinibacillus
scapharcae TW25]
Length = 157
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 68/133 (51%), Gaps = 9/133 (6%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V +FM T ++ +K T++ E LEILV RI G PV+D + KLVG+VSD D++ +
Sbjct: 3 VKEFMIT--DVISIKENTSIKELLEILVSYRIGGVPVVDSNNKLVGVVSDGDVIRYLKPN 60
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMV--GDLMTPAPVVVRETTNLEDAARL 202
D V K +++Q L K M+ D+ T + L+DA RL
Sbjct: 61 SQTVFDMFSIVMVSEPEKLTDKLQYALEKPVSIMMKRKDIKT-----IDAECELDDALRL 115
Query: 203 LLETKYRRLPVVD 215
+ ++++PV+D
Sbjct: 116 FSKYHFKKIPVLD 128
>gi|441146155|ref|ZP_20964045.1| hypothetical protein SRIM_08493 [Streptomyces rimosus subsp.
rimosus ATCC 10970]
gi|440620734|gb|ELQ83759.1| hypothetical protein SRIM_08493 [Streptomyces rimosus subsp.
rimosus ATCC 10970]
Length = 242
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 60/123 (48%), Gaps = 13/123 (10%)
Query: 100 PTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDS 159
P E ++L I+G PV+D D K++G+VS+ DL++ + R D++ P
Sbjct: 19 PEVPFKEVADLLARHAISGVPVVDRDDKVLGVVSETDLMS----HQAARDDDAPRP---- 70
Query: 160 TW----KTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVD 215
W + + +K G+ GDLMT V + + +AAR + + RLPV+D
Sbjct: 71 -WYALRRRAKSARAARTKAGGRTAGDLMTSPAVTIGPRRTVAEAARTMAAHRVERLPVID 129
Query: 216 ADG 218
+G
Sbjct: 130 EEG 132
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Query: 80 SGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 139
+G T GD MT+ + P TV EA + R+ PVID++ +L+G+V+ DLL+
Sbjct: 88 AGGRTAGDLMTSPAV--TIGPRRTVAEAARTMAAHRVERLPVIDEEGRLMGIVTRSDLLS 145
Query: 140 L 140
+
Sbjct: 146 V 146
>gi|313676663|ref|YP_004054659.1| cbs domain containing protein [Marivirga tractuosa DSM 4126]
gi|312943361|gb|ADR22551.1| CBS domain containing protein [Marivirga tractuosa DSM 4126]
Length = 156
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 67/131 (51%), Gaps = 25/131 (19%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
+V D+M T L T+ EA++IL++K+I+G PV+D++ L+G++S+ D L I
Sbjct: 23 SVKDYMATN--LITFNEHQTIYEAMDILMKKKISGGPVVDENNNLIGVISEGD--CLKEI 78
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
G+ +NS P++ +V D M + + TN+ +AA +
Sbjct: 79 V-KGKYNNS--PKLPG------------------LVKDYMATNVIHIDPETNIFEAANMF 117
Query: 204 LETKYRRLPVV 214
L ++RR PV+
Sbjct: 118 LRMRFRRFPVL 128
>gi|260909469|ref|ZP_05916173.1| inosine-5'-monophosphate dehydrogenase [Prevotella sp. oral taxon
472 str. F0295]
gi|260636394|gb|EEX54380.1| inosine-5'-monophosphate dehydrogenase [Prevotella sp. oral taxon
472 str. F0295]
Length = 494
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 73/162 (45%), Gaps = 48/162 (29%)
Query: 73 ANSAAPSSGVYTVGDFMTTKEELH---VVK---------PTT-----TVDEALEILVEKR 115
A + A G+ + M+ +E+ H VVK P T TV +AL ++ +
Sbjct: 63 AIAIAREGGIGVIHKNMSIEEQAHEVAVVKRAENGMIYDPVTIRKGRTVKDALAMMHDYH 122
Query: 116 ITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTN 175
I G PV+DDD +LVG+V++ DL R ++ + ++D + N
Sbjct: 123 IGGIPVVDDDNRLVGIVTNRDL----------RFEHRLDKKIDEVMTSEN---------- 162
Query: 176 GKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
VV + T+L AA++L E K +LPVVDA+
Sbjct: 163 -----------LVVTHQQTDLAAAAQILQENKIEKLPVVDAN 193
>gi|318041619|ref|ZP_07973575.1| CBS [Synechococcus sp. CB0101]
Length = 144
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 63/123 (51%), Gaps = 10/123 (8%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSG----RADNSM 153
V TT + EA++++ E I+G PV+D+ LVG +++ DL+ +S +G D +
Sbjct: 8 VSTTTPLQEAVKLMSEHHISGLPVVDESGALVGELTEQDLMVRESGFDAGPYVMLLDAVI 67
Query: 154 FPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPV 213
+ W EV ++L G VG+LM+ P T L AAR L + +RL V
Sbjct: 68 YLRNPLNWD--KEVHQVL----GSTVGELMSKHPHHCSPDTQLPAAARQLHDRSTQRLFV 121
Query: 214 VDA 216
+DA
Sbjct: 122 LDA 124
>gi|187777213|ref|ZP_02993686.1| hypothetical protein CLOSPO_00759 [Clostridium sporogenes ATCC
15579]
gi|187774141|gb|EDU37943.1| CBS domain protein [Clostridium sporogenes ATCC 15579]
Length = 144
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 68/134 (50%), Gaps = 30/134 (22%)
Query: 82 VYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALD 141
+ V D MT + + V +V++A ++ E + P+ +++ K+VG+++D D+ AL
Sbjct: 6 IMKVMDVMT--QNVATVNRNDSVEKAARLMSEHNVGSIPICENN-KVVGVITDRDI-ALR 61
Query: 142 SISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAAR 201
S++ +DN++ VGD+MT PVV + ++ DAAR
Sbjct: 62 SVANG--SDNNI------------------------KVGDIMTSNPVVANKDMDIHDAAR 95
Query: 202 LLLETKYRRLPVVD 215
++ E + RRLPV D
Sbjct: 96 IMSERQIRRLPVED 109
>gi|387783442|ref|YP_006069525.1| putative CBS domain-containing protein [Streptococcus salivarius
JIM8777]
gi|338744324|emb|CCB94690.1| putative CBS domain protein [Streptococcus salivarius JIM8777]
Length = 219
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 69/133 (51%), Gaps = 20/133 (15%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT + + V P TTV A +I+ +K + PVI+ D KLVGL+++ +
Sbjct: 3 VKDFMTKR--VVYVSPETTVAAAADIMRDKGLRRLPVIEHD-KLVGLITEGTM------- 52
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
A S +T + E+ LL+KT VGD+M + V + +LEDA ++L
Sbjct: 53 --AEASPS-----KATSLSIYEMNYLLNKTK---VGDIMIKNVLTVSKYASLEDAIYIML 102
Query: 205 ETKYRRLPVVDAD 217
+ K LPVVD D
Sbjct: 103 QNKVGVLPVVDND 115
Score = 39.7 bits (91), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 52/92 (56%), Gaps = 4/92 (4%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL-ALDSI 143
VGD M + + V ++++A+ I+++ ++ PV+D+D ++ G+++D D+ A I
Sbjct: 77 VGDIMI--KNVLTVSKYASLEDAIYIMLQNKVGVLPVVDND-QISGIITDKDVFRAFLEI 133
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTN 175
SG G+A + EV T + ++ L++ N
Sbjct: 134 SGYGQAGIRIGLEVPDTPRVLEKIANLIASEN 165
>gi|383786593|ref|YP_005471162.1| putative contains C-terminal CBS domains [Fervidobacterium
pennivorans DSM 9078]
gi|383109440|gb|AFG35043.1| putative transcriptional regulator, contains C-terminal CBS domains
[Fervidobacterium pennivorans DSM 9078]
Length = 313
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 63/135 (46%), Gaps = 31/135 (22%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
+V +FMT +++ VKP TV + EIL KRI+G PV+DD+ +VG++S D+
Sbjct: 17 SVKEFMT--KDVIYVKPDRTVAQVKEILRLKRISGVPVVDDNNIVVGIISIEDI------ 68
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
++ L + T + V + MT V + E L+D +
Sbjct: 69 -----------------------IKCLENGTLNESVNEHMTKNVVCLSEDATLQDVIKHF 105
Query: 204 LETKYRRLPVVDADG 218
+Y R PVVDA G
Sbjct: 106 ERYRYGRFPVVDAQG 120
>gi|259048099|ref|ZP_05738500.1| acetoin utilization protein AcuB [Granulicatella adiacens ATCC
49175]
gi|259035160|gb|EEW36415.1| acetoin utilization protein AcuB [Granulicatella adiacens ATCC
49175]
Length = 213
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 73/135 (54%), Gaps = 20/135 (14%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D+M+T + V P TTV +AL+++ E I PV++D KLVGL+++ +L+A S S
Sbjct: 3 VKDYMSTN--VITVTPETTVMKALDLMKEHDIHRLPVVED-GKLVGLLTE-ELVAGHSPS 58
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+ T + +E+ LL+KT ++M + V+ T LE+AA L+
Sbjct: 59 MA-------------TSLSMHELNYLLNKTTA---SEIMQKQVLTVKAHTLLEEAASLMR 102
Query: 205 ETKYRRLPVVDADGW 219
+ K LPVVDA G
Sbjct: 103 QQKVGVLPVVDARGH 117
>gi|124485572|ref|YP_001030188.1| hypothetical protein Mlab_0750 [Methanocorpusculum labreanum Z]
gi|124363113|gb|ABN06921.1| CBS domain containing protein [Methanocorpusculum labreanum Z]
Length = 291
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 55/116 (47%), Gaps = 31/116 (26%)
Query: 100 PTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDS 159
P TTV EA IL+E GFP+++ D + G+V++YDL+
Sbjct: 108 PATTVKEAANILLETGHGGFPILNPDSTIAGIVTEYDLM--------------------- 146
Query: 160 TWKTFNEVQKLLSKTNGKMVGD-LMTPAPVVVRETTNLEDAARLLLETKYRRLPVV 214
++L+ T ++V D +MTP P V L + + +++ YRRLPVV
Sbjct: 147 ---------RMLAGTESELVVDEIMTPCPKKVSPDLPLSNVTKQIVDDGYRRLPVV 193
>gi|222100404|ref|YP_002534972.1| CBS domain containing protein [Thermotoga neapolitana DSM 4359]
gi|221572794|gb|ACM23606.1| CBS domain containing protein [Thermotoga neapolitana DSM 4359]
Length = 215
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 69/134 (51%), Gaps = 20/134 (14%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT + P T+ +EAL+++ + +I V+ DD ++VG+V++ DLL +
Sbjct: 3 VKDFMTRNP--ITIAPETSFNEALKLMKQNKIKRLIVMKDD-RIVGIVTEKDLLY----A 55
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+A + W E+ LLSK V ++MT V V E T +EDAAR++
Sbjct: 56 SPSKATTL------NVW----ELHYLLSKLK---VEEIMTKDVVTVNENTPIEDAARIME 102
Query: 205 ETKYRRLPVVDADG 218
E LPVVD G
Sbjct: 103 ERDISGLPVVDDAG 116
Score = 37.7 bits (86), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL-ALDSISGSGR 148
V T +++A I+ E+ I+G PV+DD KLVG+++ D+ I G+ R
Sbjct: 88 VNENTPIEDAARIMEERDISGLPVVDDAGKLVGIITQTDIFKVFVEIFGTKR 139
>gi|22537717|ref|NP_688568.1| AcuB family protein [Streptococcus agalactiae 2603V/R]
gi|76786880|ref|YP_330197.1| hypothetical protein SAK_1593 [Streptococcus agalactiae A909]
gi|76799160|ref|ZP_00781343.1| AcuB family protein [Streptococcus agalactiae 18RS21]
gi|406709961|ref|YP_006764687.1| AcuB family protein [Streptococcus agalactiae GD201008-001]
gi|424048975|ref|ZP_17786526.1| hypothetical protein WY5_02765 [Streptococcus agalactiae ZQ0910]
gi|22534606|gb|AAN00441.1|AE014263_20 AcuB family protein [Streptococcus agalactiae 2603V/R]
gi|76561937|gb|ABA44521.1| CBS domain protein [Streptococcus agalactiae A909]
gi|76585490|gb|EAO62065.1| AcuB family protein [Streptococcus agalactiae 18RS21]
gi|389649597|gb|EIM71074.1| hypothetical protein WY5_02765 [Streptococcus agalactiae ZQ0910]
gi|406650846|gb|AFS46247.1| AcuB family protein [Streptococcus agalactiae GD201008-001]
Length = 219
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 69/137 (50%), Gaps = 21/137 (15%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT K L V P TTV EA ++L E + PV+++D +LVGLV++
Sbjct: 3 VKDFMTKK--LVYVSPDTTVAEAADLLREHHLRRLPVVEND-QLVGLVTE---------G 50
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
A S +T + E+ LL+KT + D+M V V + +LEDA L++
Sbjct: 51 TMAEAQPS-----KATSLSIYEMNYLLNKTK---IRDIMIKDIVTVSQYASLEDAIYLMM 102
Query: 205 ETKYRRLPVVDADGWNY 221
K LPVVD +G Y
Sbjct: 103 SRKIGVLPVVD-NGQLY 118
>gi|419697376|ref|ZP_14225110.1| inosine 5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
jejuni LMG 23211]
gi|380678358|gb|EIB93212.1| inosine 5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
jejuni LMG 23211]
Length = 485
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 57/122 (46%), Gaps = 33/122 (27%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P +V EALEI+ E RI+G PV+D++ KL+G++++ DL
Sbjct: 99 VSPKASVAEALEIMAEYRISGVPVVDENQKLIGILTNRDL------------------RF 140
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVR-ETTNLEDAARLLLETKYRRLPVVDA 216
+S + E ++MT P++ + L+DA ++ K +LP+VD
Sbjct: 141 ESDFSNLVE--------------NVMTKMPLITAPKGCTLDDAEKIFSTNKVEKLPIVDE 186
Query: 217 DG 218
G
Sbjct: 187 QG 188
>gi|339301021|ref|ZP_08650145.1| CBS domain protein [Streptococcus agalactiae ATCC 13813]
gi|417005963|ref|ZP_11944533.1| CBS domain-containing protein [Streptococcus agalactiae FSL S3-026]
gi|319745547|gb|EFV97849.1| CBS domain protein [Streptococcus agalactiae ATCC 13813]
gi|341576144|gb|EGS26555.1| CBS domain-containing protein [Streptococcus agalactiae FSL S3-026]
Length = 219
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 69/137 (50%), Gaps = 21/137 (15%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT K L V P TTV EA ++L E + PV+++D +LVGLV++
Sbjct: 3 VKDFMTKK--LVYVSPDTTVAEAADLLREHHLRRLPVVEND-QLVGLVTE---------G 50
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
A S +T + E+ LL+KT + D+M V V + +LEDA L++
Sbjct: 51 TMAEAQPS-----KATSLSIYEMNYLLNKTK---IRDIMIKDIVTVSQYASLEDAIYLMM 102
Query: 205 ETKYRRLPVVDADGWNY 221
K LPVVD +G Y
Sbjct: 103 SRKIGVLPVVD-NGQLY 118
>gi|189463688|ref|ZP_03012473.1| hypothetical protein BACINT_00019 [Bacteroides intestinalis DSM
17393]
gi|189438638|gb|EDV07623.1| inosine-5'-monophosphate dehydrogenase [Bacteroides intestinalis
DSM 17393]
Length = 491
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 62/121 (51%), Gaps = 31/121 (25%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
+K +TV +AL ++ E RI G PV+DD+ LVG+V++ DL R M +
Sbjct: 104 IKRGSTVGDALALMAEYRIGGIPVVDDERYLVGIVTNRDL----------RFVRDMNKHI 153
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
D ++++K N ++T P TT++E +++L E + +LPVVD +
Sbjct: 154 D----------EVMTKEN------IITTNP-----TTDMEAVSQILQEHRIEKLPVVDKE 192
Query: 218 G 218
G
Sbjct: 193 G 193
Score = 43.1 bits (100), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 31/51 (60%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL 137
D + TKE + PTT ++ +IL E RI PV+D + KLVGL++ D+
Sbjct: 154 DEVMTKENIITTNPTTDMEAVSQILQEHRIEKLPVVDKEGKLVGLITYKDI 204
>gi|167584761|ref|ZP_02377149.1| hypothetical protein BuboB_05471 [Burkholderia ubonensis Bu]
Length = 230
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 57/120 (47%), Gaps = 13/120 (10%)
Query: 100 PTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDS 159
P T+ +A + V+ I+G PV+D ++VG+VS DLL RA+N
Sbjct: 16 PDMTIHDAARLFVDHHISGMPVVDATGQVVGIVSQGDLLH--------RAENGTGHGKRP 67
Query: 160 TWKTF-----NEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVV 214
W F E K +G++VGD+M+ + + E L+ A L+ +R+PV+
Sbjct: 68 WWLEFLLSSPREQAARYVKEHGRLVGDVMSNQVISISEDMPLDQIADLMERRHLKRVPVL 127
>gi|423226029|ref|ZP_17212495.1| inosine-5'-monophosphate dehydrogenase [Bacteroides
cellulosilyticus CL02T12C19]
gi|392630886|gb|EIY24867.1| inosine-5'-monophosphate dehydrogenase [Bacteroides
cellulosilyticus CL02T12C19]
Length = 491
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 62/121 (51%), Gaps = 31/121 (25%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
+K +TV +AL ++ E RI G PV+DD+ LVG+V++ DL R M +
Sbjct: 104 IKRGSTVGDALALMAEYRIGGIPVVDDERYLVGIVTNRDL----------RFVRDMNKHI 153
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
D ++++K N ++T P TT++E +++L E + +LPVVD +
Sbjct: 154 D----------EVMTKEN------IITTNP-----TTDMEAVSQILQEHRIEKLPVVDKE 192
Query: 218 G 218
G
Sbjct: 193 G 193
Score = 43.1 bits (100), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 31/51 (60%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL 137
D + TKE + PTT ++ +IL E RI PV+D + KLVGL++ D+
Sbjct: 154 DEVMTKENIITTNPTTDMEAVSQILQEHRIEKLPVVDKEGKLVGLITYKDI 204
>gi|340398179|ref|YP_004727204.1| acetoin utilization protein acuB [Streptococcus salivarius CCHSS3]
gi|387761955|ref|YP_006068932.1| AcuB family protein [Streptococcus salivarius 57.I]
gi|338742172|emb|CCB92677.1| acetoin utilization protein acuB [Streptococcus salivarius CCHSS3]
gi|339292722|gb|AEJ54069.1| AcuB family protein [Streptococcus salivarius 57.I]
Length = 219
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 69/133 (51%), Gaps = 20/133 (15%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT + + V P TTV A +I+ +K + PVI+ D KLVGL+++ +
Sbjct: 3 VKDFMTKR--VVYVSPETTVAAAADIMRDKGLRRLPVIEHD-KLVGLITEGTM------- 52
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
A S +T + E+ LL+KT VGD+M + V + +LEDA ++L
Sbjct: 53 --AEASPS-----KATSLSIYEMNYLLNKTK---VGDIMIKNVLTVSKYASLEDAIYIML 102
Query: 205 ETKYRRLPVVDAD 217
+ K LPVVD D
Sbjct: 103 QNKVGVLPVVDND 115
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 52/92 (56%), Gaps = 4/92 (4%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL-ALDSI 143
VGD M + + V ++++A+ I+++ ++ PV+D+D ++ G+++D D+ A I
Sbjct: 77 VGDIMI--KNVLTVSKYASLEDAIYIMLQNKVGVLPVVDND-QISGIITDKDVFRAFLEI 133
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTN 175
SG G+A + EV T + ++ L++ N
Sbjct: 134 SGYGQAGIRIGLEVPDTPRVLEKIANLIASEN 165
>gi|228476578|ref|ZP_04061260.1| AcuB family protein [Streptococcus salivarius SK126]
gi|228251773|gb|EEK10838.1| AcuB family protein [Streptococcus salivarius SK126]
Length = 219
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 69/133 (51%), Gaps = 20/133 (15%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT + + V P TTV A +I+ +K + PVI+ D KLVGL+++ +
Sbjct: 3 VKDFMTKR--VVYVSPETTVAAAADIMRDKGLRRLPVIEHD-KLVGLITEGTM------- 52
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
A S +T + E+ LL+KT VGD+M + V + +LEDA ++L
Sbjct: 53 --AEASPS-----KATSLSIYEMNYLLNKTK---VGDIMIKNVLTVSKYASLEDAIYIML 102
Query: 205 ETKYRRLPVVDAD 217
+ K LPVVD D
Sbjct: 103 QNKVGVLPVVDND 115
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 52/92 (56%), Gaps = 4/92 (4%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL-ALDSI 143
VGD M + + V ++++A+ I+++ ++ PV+D+D ++ G+++D D+ A I
Sbjct: 77 VGDIMI--KNVLTVSKYASLEDAIYIMLQNKVGVLPVVDND-QISGIITDKDVFRAFLEI 133
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTN 175
SG G+A + EV T + ++ L++ N
Sbjct: 134 SGYGQAGIRIGLEVPDTPRVLEKIANLIASEN 165
>gi|418054606|ref|ZP_12692662.1| putative signal transduction protein with CBS domains
[Hyphomicrobium denitrificans 1NES1]
gi|353212231|gb|EHB77631.1| putative signal transduction protein with CBS domains
[Hyphomicrobium denitrificans 1NES1]
Length = 246
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 69/135 (51%), Gaps = 13/135 (9%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGS 146
D MTT + P + E L++++E+ I+G PV++ KLVG++++ D L
Sbjct: 5 DIMTTG--VVSTTPECPLSEVLQVMLERHISGLPVVNASGKLVGVITEGDCLR------- 55
Query: 147 GRADNSMFPEVDSTWKTFNEVQKLLS---KTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
R + + + F +KL + +G+ V ++MT P+ + E T++ + L+
Sbjct: 56 -RVETGTEIKRPLWRQLFTGPEKLAQEYIRAHGRKVSEVMTADPITITEDTDVSEIIHLM 114
Query: 204 LETKYRRLPVVDADG 218
+++ +RLPV+ D
Sbjct: 115 EKSRIKRLPVMRGDA 129
>gi|77408331|ref|ZP_00785073.1| AcuB family protein [Streptococcus agalactiae COH1]
gi|421148102|ref|ZP_15607774.1| hypothetical protein GB112_09575 [Streptococcus agalactiae GB00112]
gi|77173094|gb|EAO76221.1| AcuB family protein [Streptococcus agalactiae COH1]
gi|401685440|gb|EJS81448.1| hypothetical protein GB112_09575 [Streptococcus agalactiae GB00112]
Length = 219
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 69/137 (50%), Gaps = 21/137 (15%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT K L V P TTV EA ++L E + PV+++D +LVGLV++
Sbjct: 3 VKDFMTKK--LVYVSPDTTVAEAADLLREHHLRRLPVVEND-QLVGLVTE---------G 50
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
A S +T + E+ LL+KT + D+M V V + +LEDA L++
Sbjct: 51 TMAEAQPS-----KATSLSIYEMNYLLNKTK---IRDIMIKDIVTVSQYASLEDAIYLMM 102
Query: 205 ETKYRRLPVVDADGWNY 221
K LPVVD +G Y
Sbjct: 103 SRKIGVLPVVD-NGQLY 118
>gi|440700922|ref|ZP_20883148.1| CBS domain protein [Streptomyces turgidiscabies Car8]
gi|440276455|gb|ELP64712.1| CBS domain protein [Streptomyces turgidiscabies Car8]
Length = 244
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 63/134 (47%), Gaps = 7/134 (5%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
VG MTT E+ + T E +L + RI+G PV+D+D ++G++S+ DL+ +
Sbjct: 6 VGSVMTT--EVVRAEYGTPFKEVARLLADHRISGLPVVDEDDHVIGVISETDLM----VR 59
Query: 145 GSGRADNSMFPEVDSTWKTFNE-VQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
+ D P ++ +K + G LMT PVV + AAR +
Sbjct: 60 QAATPDPYEPPRHGLGLAGLTRGARRQAAKEKARTAGQLMTEPPVVAHADDTIVQAARTM 119
Query: 204 LETKYRRLPVVDAD 217
+ + RLPV+D +
Sbjct: 120 AQRRVERLPVLDEE 133
>gi|397904553|ref|ZP_10505459.1| Inosine-5'-monophosphate dehydrogenase [Caloramator australicus
RC3]
gi|397162411|emb|CCJ32793.1| Inosine-5'-monophosphate dehydrogenase [Caloramator australicus
RC3]
Length = 143
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 64/131 (48%), Gaps = 29/131 (22%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMTT + V P T V E +I+ +K + PV+D D K+VG+V+D D++ D
Sbjct: 3 VKDFMTT--NVAYVTPNTPVVEIAKIMKDKNVGSVPVLDGD-KVVGIVTDRDIVLRDIAF 59
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
G K NEV L+K D+MT ++ DAAR++
Sbjct: 60 G----------------KNPNEV---LAK-------DVMTVGVTTANPNMDIHDAARIMA 93
Query: 205 ETKYRRLPVVD 215
E + RRLPVV+
Sbjct: 94 EKQVRRLPVVE 104
>gi|269218898|ref|ZP_06162752.1| inosine-5'-monophosphate dehydrogenase [Actinomyces sp. oral taxon
848 str. F0332]
gi|269212009|gb|EEZ78349.1| inosine-5'-monophosphate dehydrogenase [Actinomyces sp. oral taxon
848 str. F0332]
Length = 500
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 57/123 (46%), Gaps = 32/123 (26%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
+ P T+ E + + RI+G PV+D D KL+G++++ DL PE
Sbjct: 103 IGPEATIAELDALCAKYRISGLPVVDGDDKLLGIITNRDL--------------RFIPES 148
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVV--RETTNLEDAARLLLETKYRRLPVVD 215
+ +T E MTP P+V R+ E+AARLL + K +LP++D
Sbjct: 149 EFAVRTVRET---------------MTPMPLVTAGRDVPQ-EEAARLLAQHKIEKLPLID 192
Query: 216 ADG 218
+G
Sbjct: 193 GEG 195
>gi|77411390|ref|ZP_00787737.1| AcuB family protein [Streptococcus agalactiae CJB111]
gi|410594961|ref|YP_006951688.1| Acetoin utilization protein AcuB [Streptococcus agalactiae SA20-06]
gi|421532751|ref|ZP_15979100.1| hypothetical protein M3M_07249 [Streptococcus agalactiae
STIR-CD-17]
gi|77162563|gb|EAO73527.1| AcuB family protein [Streptococcus agalactiae CJB111]
gi|403641979|gb|EJZ02880.1| hypothetical protein M3M_07249 [Streptococcus agalactiae
STIR-CD-17]
gi|410518600|gb|AFV72744.1| Acetoin utilization protein AcuB [Streptococcus agalactiae SA20-06]
Length = 219
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 69/137 (50%), Gaps = 21/137 (15%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT K L V P TTV EA ++L E + PV+++D +LVGLV++
Sbjct: 3 VKDFMTKK--LVYVSPDTTVAEAADLLREHHLRRLPVVEND-QLVGLVTE---------G 50
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
A S +T + E+ LL+KT + D+M V V + +LEDA L++
Sbjct: 51 TMAEAQPS-----KATSLSIYEMNYLLNKTK---IRDIMIKDIVTVSQYASLEDAIYLMM 102
Query: 205 ETKYRRLPVVDADGWNY 221
K LPVVD +G Y
Sbjct: 103 SRKIGVLPVVD-NGQLY 118
>gi|239906907|ref|YP_002953648.1| hypothetical protein DMR_22710 [Desulfovibrio magneticus RS-1]
gi|239796773|dbj|BAH75762.1| hypothetical protein [Desulfovibrio magneticus RS-1]
Length = 218
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 68/131 (51%), Gaps = 19/131 (14%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
VGD+M+T ++ ++ +A I+ +K+I PV+D D KLVG++S+ DL A
Sbjct: 3 VGDWMST--DVATATEDVSMIKAGRIMRDKKIRRLPVVDKDGKLVGIISERDLKA----- 55
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
A S +D E+ LLS+ K + MT PV +R T +E AA ++
Sbjct: 56 ----ASPSTATSLD-----MYEMTYLLSELKVKAI---MTKDPVRIRRTDTVERAALIMR 103
Query: 205 ETKYRRLPVVD 215
+ K+ LPVVD
Sbjct: 104 DRKFGSLPVVD 114
>gi|322517389|ref|ZP_08070263.1| CBS domain protein [Streptococcus vestibularis ATCC 49124]
gi|322123987|gb|EFX95543.1| CBS domain protein [Streptococcus vestibularis ATCC 49124]
Length = 219
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 69/133 (51%), Gaps = 20/133 (15%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT + + V P TTV A +I+ +K + PVI+ D KLVGL+++ +
Sbjct: 3 VKDFMTKR--VVYVSPETTVAAATDIMRDKGLRRLPVIEHD-KLVGLITEGTM------- 52
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
A S +T + E+ LL+KT VGD+M + V + +LEDA ++L
Sbjct: 53 --AEASPS-----KATSLSIYEMNYLLNKTK---VGDIMIKNVLTVSKYASLEDAIYIML 102
Query: 205 ETKYRRLPVVDAD 217
+ K LPVVD D
Sbjct: 103 QNKVGVLPVVDND 115
>gi|170287905|ref|YP_001738143.1| CBS domain-containing protein [Thermotoga sp. RQ2]
gi|403252570|ref|ZP_10918879.1| CBS domain-containing protein [Thermotoga sp. EMP]
gi|170175408|gb|ACB08460.1| CBS domain containing membrane protein [Thermotoga sp. RQ2]
gi|402812060|gb|EJX26540.1| CBS domain-containing protein [Thermotoga sp. EMP]
Length = 150
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 60/114 (52%), Gaps = 8/114 (7%)
Query: 103 TVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL-ALDSISGSGRADNSMFPEVDSTW 161
TV+ +++L + ++G PV+D D ++VG VS+ DL+ AL S S P+
Sbjct: 19 TVETVIKLLSRQNLSGVPVVDHDMRVVGFVSESDLIKALVPSYFSLLRSASFIPDT---- 74
Query: 162 KTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVD 215
N++ + + K + V D M PVVV+E L AA L+ ++ LPVVD
Sbjct: 75 ---NQLIRNVVKIKDRPVSDFMNKPPVVVKEDDPLIVAADYLIRHGFKSLPVVD 125
>gi|377811570|ref|YP_005044010.1| putative signal transduction protein [Burkholderia sp. YI23]
gi|357940931|gb|AET94487.1| putative signal transduction protein with CBS domains [Burkholderia
sp. YI23]
Length = 231
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 62/133 (46%), Gaps = 36/133 (27%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA----------------LD 141
V P TT+ E ++LV+ I+ PV+D D ++G++S+ DLL LD
Sbjct: 14 VAPETTIHELAKLLVQHHISAAPVVDKDGYVIGVISEGDLLRREEIGTEKEVRRRAWWLD 73
Query: 142 SISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAAR 201
+S G AD K++ + VG++M+ PV V E T+L + A
Sbjct: 74 MLSDGGAAD--------------------YIKSHARTVGEIMSRDPVCVSEDTSLAEIAA 113
Query: 202 LLLETKYRRLPVV 214
+L +R+PV+
Sbjct: 114 VLESRHIKRVPVL 126
>gi|71394085|gb|AAZ32124.1| CBS domain protein [uncultured euryarchaeote Alv-FOS5]
Length = 156
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 73/141 (51%), Gaps = 11/141 (7%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL-ALDSI 143
V D MT +++ V + + ++I+ +++I+G PV+++ KL+G+V+D D++ +LD
Sbjct: 4 VKDVMT--KDVVYVHDNEGIAKVIDIMKKRKISGLPVVNNSGKLIGVVTDGDIIRSLDIP 61
Query: 144 SGSGRADNSMFPEVDSTWKTFN------EVQKLLSKTNGKMVGDLMTPAPVVVRETTNLE 197
A + P D + +V++ L V D+MT P V ++E
Sbjct: 62 DFPTSAVSP--PPFDFIERLIKVKMEEWDVERALEMWKSGKVSDVMTKDPASVHMNDDVE 119
Query: 198 DAARLLLETKYRRLPVVDADG 218
AA ++LE RLPVVD DG
Sbjct: 120 KAADIMLEKNVHRLPVVDDDG 140
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 27/35 (77%)
Query: 104 VDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 138
V++A +I++EK + PV+DDD KLVG+V+ DLL
Sbjct: 118 VEKAADIMLEKNVHRLPVVDDDGKLVGIVTRLDLL 152
>gi|77406654|ref|ZP_00783697.1| AcuB family protein [Streptococcus agalactiae H36B]
gi|77174726|gb|EAO77552.1| AcuB family protein [Streptococcus agalactiae H36B]
Length = 219
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 69/137 (50%), Gaps = 21/137 (15%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT K L V P TTV EA ++L E + PV+++D +LVGLV++
Sbjct: 3 VKDFMTKK--LVYVSPDTTVAEAADLLREHHLRRLPVVEND-QLVGLVTE---------G 50
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
A S +T + E+ LL+KT + D+M V V + +LEDA L++
Sbjct: 51 TMAEAQPS-----KATSLSIYEMNYLLNKTK---IRDIMIKDIVTVSQYASLEDAIYLMM 102
Query: 205 ETKYRRLPVVDADGWNY 221
K LPVVD +G Y
Sbjct: 103 SRKIGVLPVVD-NGQLY 118
>gi|53715359|ref|YP_101351.1| inosine-5'-monophosphate dehydrogenase [Bacteroides fragilis YCH46]
gi|60683328|ref|YP_213472.1| inosine-5'-monophosphate dehydrogenase [Bacteroides fragilis NCTC
9343]
gi|265767846|ref|ZP_06095378.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 2_1_16]
gi|375360136|ref|YP_005112908.1| putative inosine-5'-monophosphate dehydrogenase [Bacteroides
fragilis 638R]
gi|383119913|ref|ZP_09940650.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 3_2_5]
gi|423252208|ref|ZP_17233210.1| inosine-5'-monophosphate dehydrogenase [Bacteroides fragilis
CL03T00C08]
gi|423252528|ref|ZP_17233459.1| inosine-5'-monophosphate dehydrogenase [Bacteroides fragilis
CL03T12C07]
gi|423261244|ref|ZP_17242145.1| inosine-5'-monophosphate dehydrogenase [Bacteroides fragilis
CL07T00C01]
gi|423267769|ref|ZP_17246749.1| inosine-5'-monophosphate dehydrogenase [Bacteroides fragilis
CL07T12C05]
gi|423272322|ref|ZP_17251290.1| inosine-5'-monophosphate dehydrogenase [Bacteroides fragilis
CL05T00C42]
gi|423276778|ref|ZP_17255710.1| inosine-5'-monophosphate dehydrogenase [Bacteroides fragilis
CL05T12C13]
gi|52218224|dbj|BAD50817.1| inosine-5'-monophosphate dehydrogenase [Bacteroides fragilis YCH46]
gi|60494762|emb|CAH09568.1| putative inosine-5'-monophosphate dehydrogenase [Bacteroides
fragilis NCTC 9343]
gi|251944079|gb|EES84598.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 3_2_5]
gi|263252518|gb|EEZ24046.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 2_1_16]
gi|301164817|emb|CBW24377.1| putative inosine-5'-monophosphate dehydrogenase [Bacteroides
fragilis 638R]
gi|387774396|gb|EIK36508.1| inosine-5'-monophosphate dehydrogenase [Bacteroides fragilis
CL07T00C01]
gi|392647820|gb|EIY41517.1| inosine-5'-monophosphate dehydrogenase [Bacteroides fragilis
CL03T00C08]
gi|392660604|gb|EIY54213.1| inosine-5'-monophosphate dehydrogenase [Bacteroides fragilis
CL03T12C07]
gi|392695514|gb|EIY88726.1| inosine-5'-monophosphate dehydrogenase [Bacteroides fragilis
CL05T00C42]
gi|392695990|gb|EIY89194.1| inosine-5'-monophosphate dehydrogenase [Bacteroides fragilis
CL05T12C13]
gi|392696028|gb|EIY89230.1| inosine-5'-monophosphate dehydrogenase [Bacteroides fragilis
CL07T12C05]
Length = 491
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 62/121 (51%), Gaps = 31/121 (25%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
+K +TV +AL ++ E +I G PV+DD+ LVG+V++ DL R + +M +
Sbjct: 104 IKQGSTVRDALALMAEYKIGGIPVVDDNRYLVGIVTNRDL----------RFERNMDKRI 153
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
D ++++K N V ++T+LE A+++L K +LPVVD +
Sbjct: 154 D----------EVMTKEN-----------LVTTNQSTDLEAASQILQYHKIEKLPVVDKE 192
Query: 218 G 218
G
Sbjct: 193 G 193
Score = 37.0 bits (84), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL 137
D + TKE L +T ++ A +IL +I PV+D + KL+GLV+ D+
Sbjct: 154 DEVMTKENLVTTNQSTDLEAASQILQYHKIEKLPVVDKEGKLIGLVTYKDI 204
>gi|312862989|ref|ZP_07723228.1| CBS domain protein [Streptococcus vestibularis F0396]
gi|311101484|gb|EFQ59688.1| CBS domain protein [Streptococcus vestibularis F0396]
Length = 219
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 71/133 (53%), Gaps = 20/133 (15%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT + + V P TTV A +I+ +K + PVI+ D KLVGL+++ +I+
Sbjct: 3 VKDFMTKR--VVYVSPETTVAAATDIMRDKGLRRLPVIEHD-KLVGLITE------GTIA 53
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+ + +T + E+ LL+KT VGD+M + V + +LEDA ++L
Sbjct: 54 EASPSK--------ATSLSIYEMNYLLNKTK---VGDIMIKNVLTVSKYASLEDAIYIML 102
Query: 205 ETKYRRLPVVDAD 217
+ K LPVVD D
Sbjct: 103 QNKVGVLPVVDND 115
>gi|148269243|ref|YP_001243703.1| CBS domain-containing protein [Thermotoga petrophila RKU-1]
gi|281411541|ref|YP_003345620.1| hypothetical protein Tnap_0098 [Thermotoga naphthophila RKU-10]
gi|147734787|gb|ABQ46127.1| CBS domain containing protein [Thermotoga petrophila RKU-1]
gi|281372644|gb|ADA66206.1| CBS domain containing membrane protein [Thermotoga naphthophila
RKU-10]
Length = 150
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 60/114 (52%), Gaps = 8/114 (7%)
Query: 103 TVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL-ALDSISGSGRADNSMFPEVDSTW 161
TV+ +++L + ++G PV+D D ++VG VS+ DL+ AL S S P+
Sbjct: 19 TVETVIKLLSRQNLSGVPVVDHDMRVVGFVSESDLIKALVPSYFSLLRSASFIPDT---- 74
Query: 162 KTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVD 215
N++ + + K + V D M PVVV+E L AA L+ ++ LPVVD
Sbjct: 75 ---NQLIRNVVKIKDRPVSDFMNKPPVVVKEDDPLIVAADYLIRHGFKSLPVVD 125
>gi|89889989|ref|ZP_01201500.1| putative inosine monophosphate dehydrogenase-related protein, CBS
domain family [Flavobacteria bacterium BBFL7]
gi|89518262|gb|EAS20918.1| putative inosine monophosphate dehydrogenase-related protein, CBS
domain family [Flavobacteria bacterium BBFL7]
Length = 155
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 65/141 (46%), Gaps = 25/141 (17%)
Query: 75 SAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSD 134
+ S+ + V DFMT K L P + +E L+++RITG PV+++ +LVG++SD
Sbjct: 13 QVSNSNQAFQVKDFMTRK--LVTFNPDQGITTVMETLLKQRITGGPVVNERKELVGIISD 70
Query: 135 YDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETT 194
DL+ + G R N P D + V D M+ +
Sbjct: 71 TDLM---HVIGDSRYHN--MPVGD------------------RKVSDYMSKQVDTIDAEA 107
Query: 195 NLEDAARLLLETKYRRLPVVD 215
++ +AA L+T +RR PV +
Sbjct: 108 DIFEAATRFLKTGHRRFPVTE 128
>gi|408534327|emb|CCK32501.1| CBS domain-containing protein [Streptomyces davawensis JCM 4913]
Length = 223
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 66/134 (49%), Gaps = 17/134 (12%)
Query: 83 YTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS 142
+ V D MT ++ VV+ + + L +++++ V+D +++G+VS+ DLL +
Sbjct: 6 HVVSDVMT--RDVAVVRRDAAFKDVVRTLHDRKVSALVVVDGGRRVLGVVSEADLLPKEE 63
Query: 143 ISGSGRADNSMFPEVDSTWKTFNEVQKL--LSKTNGKMVGDLMTPAPVVVRETTNLEDAA 200
DS + ++++L L+K G+LMT + VR T L AA
Sbjct: 64 FR-------------DSDPDRYTQLRRLSDLAKAGSVTAGELMTSPALTVRAETTLAQAA 110
Query: 201 RLLLETKYRRLPVV 214
R++ + +RLPVV
Sbjct: 111 RIMARARVKRLPVV 124
Score = 40.0 bits (92), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 67/150 (44%), Gaps = 32/150 (21%)
Query: 7 PHSIS------VARLRAPPAGRTSGRTSFALQLPCLLLSRPGCRVFSVLATSS------- 53
PH +S VA +R A + RT ++ L++ G RV V++ +
Sbjct: 5 PHVVSDVMTRDVAVVRRDAAFKDVVRTLHDRKVSALVVVDGGRRVLGVVSEADLLPKEEF 64
Query: 54 -----DRVSALRRSSAVFASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEAL 108
DR + LRR S + +G++TA G+ MT+ V+ TT+ +A
Sbjct: 65 RDSDPDRYTQLRRLSDLAKAGSVTA------------GELMTSPA--LTVRAETTLAQAA 110
Query: 109 EILVEKRITGFPVIDDDWKLVGLVSDYDLL 138
I+ R+ PV+ D +L G+VS DLL
Sbjct: 111 RIMARARVKRLPVVGDTDRLEGVVSRSDLL 140
>gi|423283056|ref|ZP_17261941.1| inosine-5'-monophosphate dehydrogenase [Bacteroides fragilis HMW
615]
gi|404581330|gb|EKA86029.1| inosine-5'-monophosphate dehydrogenase [Bacteroides fragilis HMW
615]
Length = 491
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 62/121 (51%), Gaps = 31/121 (25%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
+K +TV +AL ++ E +I G PV+DD+ LVG+V++ DL R + +M +
Sbjct: 104 IKQGSTVRDALALMAEYKIGGIPVVDDNRYLVGIVTNRDL----------RFERNMDKRI 153
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
D ++++K N V ++T+LE A+++L K +LPVVD +
Sbjct: 154 D----------EVMTKEN-----------LVTTNQSTDLEAASQILQYHKIEKLPVVDKE 192
Query: 218 G 218
G
Sbjct: 193 G 193
Score = 37.0 bits (84), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL 137
D + TKE L +T ++ A +IL +I PV+D + KL+GLV+ D+
Sbjct: 154 DEVMTKENLVTTNQSTDLEAASQILQYHKIEKLPVVDKEGKLIGLVTYKDI 204
>gi|440712734|ref|ZP_20893348.1| protein containing Cystathionine beta-synthase, core domain protein
[Rhodopirellula baltica SWK14]
gi|436442573|gb|ELP35695.1| protein containing Cystathionine beta-synthase, core domain protein
[Rhodopirellula baltica SWK14]
Length = 193
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 65/150 (43%), Gaps = 26/150 (17%)
Query: 69 GTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKL 128
GT T + +P + + M + L + PT EAL++L+ +RI+G PV+D D
Sbjct: 26 GTATLPTPSPGTMPHVTAREMMVRN-LITLSPTMDALEALDVLLRQRISGAPVVDGDGHF 84
Query: 129 VGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPV 188
VG+ S+ + + G + P VGDL P
Sbjct: 85 VGVFSEKSCMKF--VVGMAYENLPSIP-----------------------VGDLTDKNPP 119
Query: 189 VVRETTNLEDAARLLLETKYRRLPVVDADG 218
+ E T+L A+ L+ RRLPV+D++G
Sbjct: 120 TISEETDLLTIAQTFLDAACRRLPVLDSEG 149
>gi|424886817|ref|ZP_18310425.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Rhizobium leguminosarum bv. trifolii
WSM2012]
gi|393176168|gb|EJC76210.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Rhizobium leguminosarum bv. trifolii
WSM2012]
Length = 223
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 67/133 (50%), Gaps = 14/133 (10%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D MTT + + P +V A +++ ++ ++G PV+D D ++G++S+ DL+ +S
Sbjct: 3 VKDVMTTT--VVTLSPDNSVRHAAKLMSDQHVSGVPVVDHDGCVLGVISEGDLIRRTELS 60
Query: 145 GSG---RADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAAR 201
+AD + P D F K VGD+MTP PVV+ E L A
Sbjct: 61 NGAFVLKADMGLGP--DDRANAF-------IKRCAWRVGDVMTPDPVVIDEEAPLFRVAV 111
Query: 202 LLLETKYRRLPVV 214
L+ + +R+PV+
Sbjct: 112 LMQDRGIKRIPVL 124
>gi|160890575|ref|ZP_02071578.1| hypothetical protein BACUNI_03018 [Bacteroides uniformis ATCC 8492]
gi|317479883|ref|ZP_07939000.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 4_1_36]
gi|423304002|ref|ZP_17282001.1| inosine-5'-monophosphate dehydrogenase [Bacteroides uniformis
CL03T00C23]
gi|423307274|ref|ZP_17285264.1| inosine-5'-monophosphate dehydrogenase [Bacteroides uniformis
CL03T12C37]
gi|156859574|gb|EDO53005.1| inosine-5'-monophosphate dehydrogenase [Bacteroides uniformis ATCC
8492]
gi|316903957|gb|EFV25794.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 4_1_36]
gi|392685930|gb|EIY79238.1| inosine-5'-monophosphate dehydrogenase [Bacteroides uniformis
CL03T00C23]
gi|392690526|gb|EIY83789.1| inosine-5'-monophosphate dehydrogenase [Bacteroides uniformis
CL03T12C37]
Length = 491
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 62/120 (51%), Gaps = 31/120 (25%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
+K +TV +AL ++ E +I G PV+DD+ LVG+V++ DL R + M +
Sbjct: 104 IKRGSTVADALALMAEYKIGGIPVVDDERYLVGIVTNRDL----------RFEKDMNKRI 153
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
D ++++K N ++T P TT++E +++L E + +LPVVD D
Sbjct: 154 D----------EVMTKEN------IITTNP-----TTDMEAVSQILQEHRIEKLPVVDKD 192
Score = 44.3 bits (103), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 31/51 (60%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL 137
D + TKE + PTT ++ +IL E RI PV+D D KLVGL++ D+
Sbjct: 154 DEVMTKENIITTNPTTDMEAVSQILQEHRIEKLPVVDKDNKLVGLITYKDI 204
>gi|145351771|ref|XP_001420237.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580471|gb|ABO98530.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 133
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 63/123 (51%), Gaps = 16/123 (13%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGR--ADNSMFP 155
V+P +V EA+++LV+ RI+ PV++ +++G+VS+YDL+A + + AD+ MFP
Sbjct: 12 VRPDESVFEAMKLLVDNRISAVPVVNASGEVLGVVSEYDLMARVGKKETTKSVADDGMFP 71
Query: 156 EVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVD 215
+ + K +G V M A + L +A L+L R+PVVD
Sbjct: 72 -------------RRMYKASGSKVSTAMHEATTCTPDMP-LVEATELMLNGNLARMPVVD 117
Query: 216 ADG 218
G
Sbjct: 118 DRG 120
>gi|290769657|gb|ADD61437.1| putative protein [uncultured organism]
Length = 491
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 62/120 (51%), Gaps = 31/120 (25%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
+K +TV +AL ++ E +I G PV+DD+ LVG+V++ DL R + M +
Sbjct: 104 IKRGSTVADALALMAEYKIGGIPVVDDERYLVGIVTNRDL----------RFEKDMNKRI 153
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
D ++++K N ++T P TT++E +++L E + +LPVVD D
Sbjct: 154 D----------EVMTKEN------IITTNP-----TTDMEAVSQILQEHRIEKLPVVDKD 192
Score = 44.3 bits (103), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 31/51 (60%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL 137
D + TKE + PTT ++ +IL E RI PV+D D KLVGL++ D+
Sbjct: 154 DEVMTKENIITTNPTTDMEAVSQILQEHRIEKLPVVDKDNKLVGLITYKDI 204
>gi|336412095|ref|ZP_08592553.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 2_1_56FAA]
gi|335939267|gb|EGN01144.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 2_1_56FAA]
Length = 491
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 62/121 (51%), Gaps = 31/121 (25%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
+K +TV +AL ++ E +I G PV+DD+ LVG+V++ DL R + +M +
Sbjct: 104 IKQGSTVRDALALMAEYKIGGIPVVDDNRYLVGIVTNRDL----------RFERNMDKRI 153
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
D ++++K N V ++T+LE A+++L K +LPVVD +
Sbjct: 154 D----------EVMTKEN-----------LVTTNQSTDLEAASQILQYHKIEKLPVVDKE 192
Query: 218 G 218
G
Sbjct: 193 G 193
Score = 37.0 bits (84), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL 137
D + TKE L +T ++ A +IL +I PV+D + KL+GLV+ D+
Sbjct: 154 DEVMTKENLVTTNQSTDLEAASQILQYHKIEKLPVVDKEGKLIGLVTYKDI 204
>gi|345011229|ref|YP_004813583.1| hypothetical protein [Streptomyces violaceusniger Tu 4113]
gi|344037578|gb|AEM83303.1| CBS domain containing membrane protein [Streptomyces violaceusniger
Tu 4113]
Length = 221
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 57/113 (50%), Gaps = 11/113 (9%)
Query: 106 EALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFN 165
E + L + R++ PV++ + +++G+VS+ DLL + S A + P++
Sbjct: 27 EIVRTLEQWRVSALPVLEGEGRVIGVVSEADLLPKEEFRDSDPARVAQLPDLPG------ 80
Query: 166 EVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADG 218
++K +LMT + V + L +AAR++ + +RLPVVD +G
Sbjct: 81 -----IAKAGAVTADELMTSPAITVHASATLAEAARIMTHKRVKRLPVVDEEG 128
Score = 38.5 bits (88), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 10/95 (10%)
Query: 80 SGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 139
+G T + MT+ V + T+ EA I+ KR+ PV+D++ +L G+VS DLL
Sbjct: 84 AGAVTADELMTSPA--ITVHASATLAEAARIMTHKRVKRLPVVDEEGRLEGIVSRADLLK 141
Query: 140 L-----DSISGSGRAD--NSMFPEVDSTWK-TFNE 166
+ D I R + +FP T + + NE
Sbjct: 142 VFLRPDDDIEEEVRREVVAHLFPAAGETVRVSVNE 176
>gi|453051718|gb|EME99217.1| hypothetical protein H340_17457 [Streptomyces mobaraensis NBRC
13819 = DSM 40847]
Length = 229
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 64/134 (47%), Gaps = 16/134 (11%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL--ALD 141
TV + MT + V+P T E ++ L E +T PV+D ++VG+VS+ DL+ + D
Sbjct: 6 TVDELMTRN--VVRVRPDTPFKEIVKELAENDVTAVPVVDQGGRVVGVVSEADLMRKSAD 63
Query: 142 SISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAAR 201
GR PE W+ +K G +LM+ PV R N+ + AR
Sbjct: 64 QPDPFGRVPVP-NPE---AWER--------AKAEGARAEELMSAPPVCARPEWNVVETAR 111
Query: 202 LLLETKYRRLPVVD 215
L+ +RLPVVD
Sbjct: 112 LMSAQNVKRLPVVD 125
>gi|295136416|ref|YP_003587092.1| Inosine monophosphate dehydrogenase-related protein [Zunongwangia
profunda SM-A87]
gi|294984431|gb|ADF54896.1| Inosine monophosphate dehydrogenase-related protein [Zunongwangia
profunda SM-A87]
Length = 155
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 64/149 (42%), Gaps = 28/149 (18%)
Query: 70 TLTANSAAP---SSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDW 126
+ AAP S V D+MT+ L K V E +E L++ +I+G PV++D +
Sbjct: 5 SFQGRRAAPVKIESAPIMVEDYMTS--SLITFKRDQYVAEVMEALLKNKISGAPVVNDRY 62
Query: 127 KLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPA 186
+LVG++SD D + K +E + + + M+
Sbjct: 63 ELVGIISDADCM-----------------------KQISESRYFNMPIGDMKIENYMSTD 99
Query: 187 PVVVRETTNLEDAARLLLETKYRRLPVVD 215
V+ + ++ D A+L YRR PVV+
Sbjct: 100 VAVIHKNLSIFDCAQLFYNNSYRRFPVVE 128
>gi|212225036|ref|YP_002308272.1| inosine 5'-monophosphate dehydrogenase [Thermococcus onnurineus
NA1]
gi|212009993|gb|ACJ17375.1| inosine-5'-monophosphate dehydrogenase [Thermococcus onnurineus
NA1]
Length = 486
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 59/126 (46%), Gaps = 34/126 (26%)
Query: 93 EELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNS 152
E++ ++P T+D AL ++ + I G PV+ +D +++G+++ D+ A
Sbjct: 101 EDVITIEPDETLDYALFLMEKNDIDGLPVVGEDGRIIGIITKKDIAA------------- 147
Query: 153 MFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLP 212
G++V ++MT + V E +EDA L++E + RLP
Sbjct: 148 ---------------------KEGRLVREVMTRDVITVPEDIAVEDALTLMVENRIARLP 186
Query: 213 VVDADG 218
VVD DG
Sbjct: 187 VVDGDG 192
Score = 38.9 bits (89), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 7/66 (10%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGS 146
D +T E++ V++AL ++VE RI PV+D D KLVG+++ DL+ +
Sbjct: 160 DVITVPEDI-------AVEDALTLMVENRIARLPVVDGDGKLVGIITVSDLMMRKKYRNA 212
Query: 147 GRADNS 152
R +N
Sbjct: 213 VRDENG 218
>gi|357040593|ref|ZP_09102379.1| CBS domain containing membrane protein [Desulfotomaculum gibsoniae
DSM 7213]
gi|355356394|gb|EHG04183.1| CBS domain containing membrane protein [Desulfotomaculum gibsoniae
DSM 7213]
Length = 154
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 73/137 (53%), Gaps = 12/137 (8%)
Query: 86 GDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISG 145
GD MTT ++ V +++ +L+E RI+G PV+DD KLVG+VS+ DL+ +
Sbjct: 5 GDIMTT--DVITVNTHDDLEKVARLLLEHRISGLPVVDDGGKLVGVVSEADLVFQEKPVR 62
Query: 146 SGRA----DNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAAR 201
+ D+ ++ E + + ++++ +++ VG+LM+ V ++ D A
Sbjct: 63 TPFYVVIFDSPIYLERPNRF--IEDIKRAIAQK----VGELMSTNLYTVGPEASIRDVAT 116
Query: 202 LLLETKYRRLPVVDADG 218
++ E R+PVVD DG
Sbjct: 117 IIAEKGVNRVPVVDVDG 133
Score = 38.5 bits (88), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
VG+ M+T L+ V P ++ + I+ EK + PV+D D KL+G+++ D++ S+
Sbjct: 94 VGELMSTN--LYTVGPEASIRDVATIIAEKGVNRVPVVDVDGKLIGIITRQDIIKA-SLG 150
Query: 145 GSGR 148
+GR
Sbjct: 151 DAGR 154
>gi|427385456|ref|ZP_18881763.1| inosine-5'-monophosphate dehydrogenase [Bacteroides oleiciplenus
YIT 12058]
gi|425727100|gb|EKU89961.1| inosine-5'-monophosphate dehydrogenase [Bacteroides oleiciplenus
YIT 12058]
Length = 491
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 62/121 (51%), Gaps = 31/121 (25%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
+K +TV +AL ++ E RI G PV+DD+ LVG+V++ DL R M +
Sbjct: 104 IKRGSTVGDALALMAEYRIGGIPVVDDEKYLVGIVTNRDL----------RFVRDMDKHI 153
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
D ++++K N ++T P TT++E +++L E + +LPVVD +
Sbjct: 154 D----------EVMTKEN------IITTNP-----TTDMEAVSQILQEHRIEKLPVVDKE 192
Query: 218 G 218
G
Sbjct: 193 G 193
Score = 43.1 bits (100), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 31/51 (60%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL 137
D + TKE + PTT ++ +IL E RI PV+D + KLVGL++ D+
Sbjct: 154 DEVMTKENIITTNPTTDMEAVSQILQEHRIEKLPVVDKEGKLVGLITYKDI 204
>gi|270295712|ref|ZP_06201912.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. D20]
gi|270273116|gb|EFA18978.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. D20]
Length = 491
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 62/120 (51%), Gaps = 31/120 (25%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
+K +TV +AL ++ E +I G PV+DD+ LVG+V++ DL R + M +
Sbjct: 104 IKRGSTVADALALMAEYKIGGIPVVDDERYLVGIVTNRDL----------RFEKDMNKRI 153
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
D ++++K N ++T P TT++E +++L E + +LPVVD D
Sbjct: 154 D----------EVMTKEN------IITTNP-----TTDMEAVSQILQEHRIEKLPVVDKD 192
Score = 44.3 bits (103), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 31/51 (60%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL 137
D + TKE + PTT ++ +IL E RI PV+D D KLVGL++ D+
Sbjct: 154 DEVMTKENIITTNPTTDMEAVSQILQEHRIEKLPVVDKDNKLVGLITYKDI 204
>gi|154248815|ref|YP_001409640.1| inosine-5'-monophosphate dehydrogenase [Fervidobacterium nodosum
Rt17-B1]
gi|154152751|gb|ABS59983.1| inosine-5'-monophosphate dehydrogenase [Fervidobacterium nodosum
Rt17-B1]
Length = 508
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 68/162 (41%), Gaps = 51/162 (31%)
Query: 73 ANSAAPSSGVYTVGDFMTTKEELH-----------------VVKPTTTVDEALEILVEKR 115
A + A G+ + ++ KE+ H V+ P T+ AL+++ E +
Sbjct: 79 AKALAREGGIGIIHKNLSIKEQAHQVEIVKRTENGVIENPVVIHPNDTIFNALKLMAEYK 138
Query: 116 ITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTN 175
I GFPV+DD+ LVGL+++ D+ +S
Sbjct: 139 IGGFPVVDDEGYLVGLLTNRDVRFESDVS------------------------------- 167
Query: 176 GKMVGDLMTPAP--VVVRETTNLEDAARLLLETKYRRLPVVD 215
K V +LMTP VV +LE A ++L E + +LP+VD
Sbjct: 168 -KKVKELMTPREKLVVALPGISLEKAKQILHEHRIEKLPIVD 208
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 49/90 (54%), Gaps = 3/90 (3%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V + MT +E+L V P ++++A +IL E RI P++DD KL+GL++ D+L++
Sbjct: 170 VKELMTPREKLVVALPGISLEKAKQILHEHRIEKLPIVDDKNKLIGLITIKDVLSVIEHP 229
Query: 145 GSGRADNSMF---PEVDSTWKTFNEVQKLL 171
+ R V ++ TF V+ L+
Sbjct: 230 NAARDSKGRLIVGAAVGTSKDTFERVEALV 259
>gi|91975824|ref|YP_568483.1| putative signal-transduction protein with CBS domains
[Rhodopseudomonas palustris BisB5]
gi|91682280|gb|ABE38582.1| CBS:transport associated [Rhodopseudomonas palustris BisB5]
Length = 243
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 62/129 (48%), Gaps = 13/129 (10%)
Query: 93 EELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNS 152
E++ + P ++ +A +++E ++G PV+D D KLVG++S+ D + + G+ R
Sbjct: 9 EQVMTIGPEASIIDAANVMLENHVSGLPVVDADGKLVGIISEGDFIRRAEL-GTQRK--- 64
Query: 153 MFPEVDSTWKTF----NEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKY 208
S W +G+ VG++MT P + E T +E + + +
Sbjct: 65 -----RSRWLRLLLGPGTCAADFVHEHGRKVGEVMTHHPHTITEDTPIEAIVKTMEKHHV 119
Query: 209 RRLPVVDAD 217
+RLPV+ D
Sbjct: 120 KRLPVMRGD 128
>gi|116750087|ref|YP_846774.1| hypothetical protein Sfum_2661 [Syntrophobacter fumaroxidans MPOB]
gi|116699151|gb|ABK18339.1| CBS domain containing membrane protein [Syntrophobacter
fumaroxidans MPOB]
Length = 156
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 60/128 (46%), Gaps = 24/128 (18%)
Query: 100 PTTTVDEALEIL------VEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSM 153
PT TV EA+ + +R+ G VID+D +LVG++S YD+L L M
Sbjct: 18 PTMTVAEAVLAFENASRTLGRRVFGMMVIDEDGELVGMISMYDILVL------------M 65
Query: 154 FPEVDSTWKTFNE------VQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETK 207
P+ W + +++ L + VGDLM+ + + T+L ++L
Sbjct: 66 RPKHIHIWGEMKDIDVTGFIRQNLQRAKQIQVGDLMSTDIITITPETHLLSIVDIMLRKH 125
Query: 208 YRRLPVVD 215
RRLPV+D
Sbjct: 126 VRRLPVLD 133
>gi|110634581|ref|YP_674789.1| hypothetical protein Meso_2233 [Chelativorans sp. BNC1]
gi|110285565|gb|ABG63624.1| CBS domain containing membrane protein [Chelativorans sp. BNC1]
Length = 232
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 65/131 (49%), Gaps = 12/131 (9%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGS 146
D M+T+ V ++ A +I+++ ++G PV+ DD +LVG++++ DLL + G+
Sbjct: 5 DLMSTR--CVTVSAENSIKHAAQIMLDHDLSGLPVLADDGRLVGIITEGDLLRRCEL-GN 61
Query: 147 GRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLET 206
+A + PE + +G VG +M+P V V E + + A L+
Sbjct: 62 VKAGEELLPEKRARGYLHG---------HGWKVGHVMSPDVVAVTEDASADHIAELMARH 112
Query: 207 KYRRLPVVDAD 217
+R+PV+ D
Sbjct: 113 GIKRVPVLRGD 123
>gi|305666499|ref|YP_003862786.1| CBS domain-containing protein [Maribacter sp. HTCC2170]
gi|88708766|gb|EAR01001.1| CBS domain protein [Maribacter sp. HTCC2170]
Length = 155
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 65/132 (49%), Gaps = 25/132 (18%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D+MTTK L KP +V+E ++ L+ +I+G PV++D +LVG++S+ D + IS
Sbjct: 23 VSDYMTTK--LITFKPDQSVEEVIDSLINNKISGGPVVNDKNELVGIISEGDCIK--HIS 78
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
S + M + + +MV ++ T + N+ DAA L
Sbjct: 79 DSRYYNMPMDDD----------------RIENRMVKNVET-----IDGNMNIFDAANKFL 117
Query: 205 ETKYRRLPVVDA 216
K RR P+V+A
Sbjct: 118 NEKRRRFPIVEA 129
>gi|222100721|ref|YP_002535289.1| CBS domain containing protein [Thermotoga neapolitana DSM 4359]
gi|221573111|gb|ACM23923.1| CBS domain containing protein [Thermotoga neapolitana DSM 4359]
Length = 150
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 61/114 (53%), Gaps = 8/114 (7%)
Query: 103 TVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL-ALDSISGSGRADNSMFPEVDSTW 161
TV+ +++L + ++G PV+D D ++VG VS+ DL+ AL S S P+
Sbjct: 19 TVETVIKLLSRQNLSGIPVVDHDMRVVGFVSESDLIKALVPSYFSLLRSASFIPDT---- 74
Query: 162 KTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVD 215
N++ + + K K + + M+ PVVV+E L AA L+ ++ LPVVD
Sbjct: 75 ---NQLIRNIVKIKDKPISNYMSKPPVVVKEDDPLIVAADYLIRHGFKSLPVVD 125
>gi|441146167|ref|ZP_20964057.1| putative CBS domain-containing protein [Streptomyces rimosus subsp.
rimosus ATCC 10970]
gi|440620746|gb|ELQ83771.1| putative CBS domain-containing protein [Streptomyces rimosus subsp.
rimosus ATCC 10970]
Length = 227
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 66/140 (47%), Gaps = 17/140 (12%)
Query: 81 GVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLAL 140
G++TV D MT + V E + ++ + +++ PV++ + +++G+VS+ DLL
Sbjct: 13 GLHTVSDVMT--HTVVAVGRNAPFKEIVRMMEQWKVSALPVLEGEGRVIGVVSEADLLPK 70
Query: 141 DSISGSGRADNSMFPEVDSTWKTFNEVQKL--LSKTNGKMVGDLMTPAPVVVRETTNLED 198
+ DS F + ++L L+K G+LM+ + V L
Sbjct: 71 EEFR-------------DSDPSRFEQRRRLEDLAKAGALTAGELMSAPAICVHADAALPQ 117
Query: 199 AARLLLETKYRRLPVVDADG 218
AAR++ +RLPV DA G
Sbjct: 118 AARIMAVRHVKRLPVTDAQG 137
>gi|384083466|ref|ZP_09994641.1| hypothetical protein gproHI_09146 [gamma proteobacterium HIMB30]
Length = 140
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 66/135 (48%), Gaps = 27/135 (20%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
V DFMTT L KP+ + +++L+ + I+G PV+DDD KL+G++S+ D L +
Sbjct: 6 VVDDFMTT--HLATAKPSMDLLSLVDLLLIQGISGAPVVDDDGKLIGMISEQDCLRA-IL 62
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
G+ + D G VGD+M+ ++ N+ + A +
Sbjct: 63 VGTYQGD------------------------IGGRVGDVMSNPVETIQLGENIVEVAERM 98
Query: 204 LETKYRRLPVVDADG 218
+ T RR PVVD+DG
Sbjct: 99 IRTNRRRFPVVDSDG 113
>gi|357636277|ref|ZP_09134152.1| CBS domain protein [Streptococcus macacae NCTC 11558]
gi|357584731|gb|EHJ51934.1| CBS domain protein [Streptococcus macacae NCTC 11558]
Length = 219
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 70/133 (52%), Gaps = 20/133 (15%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFM+ K + V P TTV +A +I+ EKR+ PVI++D KLVGLV++ +
Sbjct: 3 VKDFMSKK--VVYVSPDTTVAKATDIMREKRLRRLPVIEND-KLVGLVTEGTI------- 52
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
A S +T + E+ LL+KT + D+M + + + +LEDA L++
Sbjct: 53 --AEATPS-----KATSLSIYEMNYLLNKTK---IRDVMIHDVITISKDAHLEDAIYLMM 102
Query: 205 ETKYRRLPVVDAD 217
K LPVVD +
Sbjct: 103 NHKIGVLPVVDEE 115
>gi|224009930|ref|XP_002293923.1| hypothetical protein THAPSDRAFT_264157 [Thalassiosira pseudonana
CCMP1335]
gi|220970595|gb|EED88932.1| hypothetical protein THAPSDRAFT_264157 [Thalassiosira pseudonana
CCMP1335]
Length = 132
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 65/139 (46%), Gaps = 21/139 (15%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D MT + + P T+VDEA+ L+ ++G PV++ +LVG VS +D L
Sbjct: 3 VSDLMT--QNPFTLSPQTSVDEAIATLLAAGVSGAPVVEQ-LRLVGFVSSFDFL------ 53
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQ--KLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARL 202
P +S T E++ + + G+ V D+MT PV V ++ AA +
Sbjct: 54 ----------PREESGLVTLGEMEDSETARRILGQSVKDIMTRNPVSVNTNDLMKTAAEI 103
Query: 203 LLETKYRRLPVVDADGWNY 221
+ + + LPVVD N
Sbjct: 104 MAKHRLHVLPVVDVHRGNL 122
>gi|374984112|ref|YP_004959607.1| hypothetical protein SBI_01355 [Streptomyces bingchenggensis BCW-1]
gi|297154764|gb|ADI04476.1| hypothetical protein SBI_01355 [Streptomyces bingchenggensis BCW-1]
Length = 224
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 69/137 (50%), Gaps = 22/137 (16%)
Query: 84 TVGDFMTTKEELHVVKPTTTV--DEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALD 141
TVG+ MT +VV+ + E +E+L E +T PV+D +G+VS+ DLL
Sbjct: 5 TVGELMTR----NVVRAPRELPFKEIVELLAENDVTAVPVVDGSGHPIGVVSEADLLR-- 58
Query: 142 SISGSGRADNS---MFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLED 198
SG+AD S P +++ W+ +KT G +LM+ V R ++ +
Sbjct: 59 --KSSGQADPSGRVPIPHLEA-WER--------AKTEGTRAEELMSAPAVCARPEWSVVE 107
Query: 199 AARLLLETKYRRLPVVD 215
AARL+ +RLPVVD
Sbjct: 108 AARLMAVQGVKRLPVVD 124
>gi|294633387|ref|ZP_06711946.1| CBS domain-containing protein [Streptomyces sp. e14]
gi|292831168|gb|EFF89518.1| CBS domain-containing protein [Streptomyces sp. e14]
Length = 225
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 57/106 (53%), Gaps = 15/106 (14%)
Query: 115 RITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKL--LS 172
+++ PV++ + +++G+VS+ DLL + DS F ++++L L+
Sbjct: 25 KVSALPVLEGEGRVIGVVSEADLLPKEEFR-------------DSDPDRFTQLRRLSDLA 71
Query: 173 KTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADG 218
K G+LM+ V V L +AAR++ + + +RLPVV+A+G
Sbjct: 72 KAGALTAGELMSSPAVTVHPDAPLAEAARIMAQRRVKRLPVVNAEG 117
Score = 37.7 bits (86), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 14/88 (15%)
Query: 51 TSSDRVSALRRSSAVFASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEI 110
+ DR + LRR S + +G LTA G+ M++ V P + EA I
Sbjct: 56 SDPDRFTQLRRLSDLAKAGALTA------------GELMSSPA--VTVHPDAPLAEAARI 101
Query: 111 LVEKRITGFPVIDDDWKLVGLVSDYDLL 138
+ ++R+ PV++ + L G+VS DLL
Sbjct: 102 MAQRRVKRLPVVNAEGLLEGVVSRGDLL 129
>gi|302867253|ref|YP_003835890.1| CBS domain-containing protein [Micromonospora aurantiaca ATCC
27029]
gi|302570112|gb|ADL46314.1| CBS domain containing protein [Micromonospora aurantiaca ATCC
27029]
Length = 234
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 67/133 (50%), Gaps = 11/133 (8%)
Query: 83 YTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS 142
+ V D MT ++ V+ T E +++L E+ +T PV+D+ +++G+VS+ DL+
Sbjct: 4 WQVQDVMT--RDVASVREGTDYREIVDVLTERHVTAAPVVDETRRVLGVVSEADLMYKVE 61
Query: 143 ISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARL 202
G + + + P+ ++ +K + DLMT PV + + +AARL
Sbjct: 62 FLGQPQ-ERRILPD--------RHRREARAKAGATLAADLMTAPPVTITPDATIVEAARL 112
Query: 203 LLETKYRRLPVVD 215
+ +RLPVV+
Sbjct: 113 MDARGVKRLPVVN 125
>gi|430760272|ref|YP_007216129.1| CBS domain protein [Thioalkalivibrio nitratireducens DSM 14787]
gi|430009896|gb|AGA32648.1| CBS domain protein [Thioalkalivibrio nitratireducens DSM 14787]
Length = 160
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 57/112 (50%), Gaps = 2/112 (1%)
Query: 104 VDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKT 163
VD +++LVE+R+ G PV+D D L+G+V+ DL + ++ + D F
Sbjct: 20 VDALVDLLVERRVNGVPVVDADGVLLGMVTTGDL--IHRVADARVEDRGSFWRESFYKSV 77
Query: 164 FNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVD 215
F + G ++M+ P V + ++ AARLL+E + + LPV+D
Sbjct: 78 FRPNGPEPNPAEGATAAEVMSRNPAFVAPSDDMAVAARLLIEHRVKSLPVLD 129
>gi|32473238|ref|NP_866232.1| inosine monophosphate dehydrogenase-like protein [Rhodopirellula
baltica SH 1]
gi|417303259|ref|ZP_12090318.1| protein containing Cystathionine beta-synthase, core domain
[Rhodopirellula baltica WH47]
gi|421613449|ref|ZP_16054530.1| protein containing Cystathionine beta-synthase, core domain protein
[Rhodopirellula baltica SH28]
gi|32397917|emb|CAD73918.1| conserved hypothetical protein-putative inosine monophosphate
dehydrogenase-related protein [Rhodopirellula baltica SH
1]
gi|327540439|gb|EGF27024.1| protein containing Cystathionine beta-synthase, core domain
[Rhodopirellula baltica WH47]
gi|408495744|gb|EKK00322.1| protein containing Cystathionine beta-synthase, core domain protein
[Rhodopirellula baltica SH28]
Length = 193
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 65/150 (43%), Gaps = 26/150 (17%)
Query: 69 GTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKL 128
GT T + +P + + M + L + PT EAL++L+ +RI+G PV+D D
Sbjct: 26 GTATLPTPSPGTMPHVTAREMMVRN-LITLSPTMDALEALDVLLRQRISGAPVVDGDGHF 84
Query: 129 VGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPV 188
VG+ S+ + + G + P VGDL P
Sbjct: 85 VGVFSEKSCMKF--VVGMAYENLPSIP-----------------------VGDLTDKNPP 119
Query: 189 VVRETTNLEDAARLLLETKYRRLPVVDADG 218
+ E T+L A+ L+ RRLPV+D++G
Sbjct: 120 TISEETDLLTIAQTFLDAACRRLPVLDSEG 149
>gi|260584956|ref|ZP_05852700.1| acetoin utilization protein AcuB [Granulicatella elegans ATCC
700633]
gi|260157386|gb|EEW92458.1| acetoin utilization protein AcuB [Granulicatella elegans ATCC
700633]
Length = 213
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 75/134 (55%), Gaps = 20/134 (14%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D+M+T L V+PTTTV +AL+++ E + PV++ D KLVGL++ +L+A +S S
Sbjct: 3 VKDYMSTN--LITVEPTTTVMKALDLMKEHDVHRLPVVEGD-KLVGLLT-AELVAQNSPS 58
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+T + +E+ LL+KT K D+M + V+ T LE+AA ++
Sbjct: 59 M-------------ATSLSVHELNYLLNKTTAK---DIMLKQVITVKPTAVLEEAASIMR 102
Query: 205 ETKYRRLPVVDADG 218
+ LPV+++ G
Sbjct: 103 QQGIGVLPVLESRG 116
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL-ALDSISGSGRADNSMFPE 156
VKPT ++EA I+ ++ I PV++ LVG+++D D++ A ISG + +F E
Sbjct: 88 VKPTAVLEEAASIMRQQGIGVLPVLESRGNLVGIITDKDIMDAFIDISGYNTPGSRLFIE 147
Query: 157 VDS 159
++
Sbjct: 148 INE 150
>gi|146318309|ref|YP_001198021.1| hypothetical protein SSU05_0655 [Streptococcus suis 05ZYH33]
gi|145689115|gb|ABP89621.1| hypothetical protein SSU05_0655 [Streptococcus suis 05ZYH33]
Length = 122
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 70/132 (53%), Gaps = 20/132 (15%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
+V DFMT K + + P TTV A +I+ E+ + PVI++D KLVGLV++ +I
Sbjct: 2 SVKDFMTRK--VVYISPDTTVAHAADIMREQDLHRLPVIEND-KLVGLVTE------GTI 52
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
+ + + +T + E+ LL+KT V D+M + V +LEDAA L+
Sbjct: 53 AEASPSK--------ATSLSIYEMNYLLNKTK---VKDVMIKNVITVSGYASLEDAAYLM 101
Query: 204 LETKYRRLPVVD 215
+ K LPVVD
Sbjct: 102 YKNKVGILPVVD 113
>gi|325959819|ref|YP_004291285.1| hypothetical protein Metbo_2094 [Methanobacterium sp. AL-21]
gi|325331251|gb|ADZ10313.1| CBS domain containing membrane protein [Methanobacterium sp. AL-21]
Length = 159
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 62/113 (54%), Gaps = 9/113 (7%)
Query: 113 EKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFP------EVDSTWK-TFN 165
+ +I+G PV+D++ +VG++S+ D++ L I N + P E+ K +
Sbjct: 29 DNKISGAPVVDENNHVVGVISEGDIMRLIEIHSPKI--NLILPAPLDLIELPIKMKYELD 86
Query: 166 EVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADG 218
EV + + K ++ +MT + V+ T++ DAA+LL K +RLPV+D DG
Sbjct: 87 EVAEDMQKAGSTVIDQIMTKKIIKVKPDTSVIDAAKLLDSHKIKRLPVIDNDG 139
Score = 40.4 bits (93), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 139
TV D + TK+ + V KP T+V +A ++L +I PVID+D KLVG+++ D++A
Sbjct: 98 TVIDQIMTKKIIKV-KPDTSVIDAAKLLDSHKIKRLPVIDNDGKLVGIITRGDIIA 152
>gi|329766621|ref|ZP_08258164.1| inosine-5'-monophosphate dehydrogenase [Candidatus Nitrosoarchaeum
limnia SFB1]
gi|329136876|gb|EGG41169.1| inosine-5'-monophosphate dehydrogenase [Candidatus Nitrosoarchaeum
limnia SFB1]
Length = 477
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 71/164 (43%), Gaps = 49/164 (29%)
Query: 73 ANSAAPSSGVYTVGDFMTTKEEL-----------------HVVKPTTTVDEALEILVEKR 115
A + A + G+ + F+T KE+ + V TV +A+ EK
Sbjct: 57 AVAMARAGGIGIIHRFLTIKEQANEVLKVKRSGSVMIENPYAVSSDKTVQDAINYAEEKE 116
Query: 116 ITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTN 175
I+G V+D + KLVG+V+D DLL E DST
Sbjct: 117 ISGLLVVDSNSKLVGIVTDRDLLF----------------ETDST--------------- 145
Query: 176 GKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGW 219
+++ D+MT V + +L++A ++L + + +LP++D G+
Sbjct: 146 -RLIKDVMTKDVVTAKLGVSLDEAKKILHKHRIEKLPIIDDSGF 188
>gi|297568229|ref|YP_003689573.1| CBS domain containing membrane protein [Desulfurivibrio
alkaliphilus AHT2]
gi|296924144|gb|ADH84954.1| CBS domain containing membrane protein [Desulfurivibrio
alkaliphilus AHT2]
Length = 150
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 66/135 (48%), Gaps = 16/135 (11%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGS 146
D MT E+ V P V++ +L E+RI+G PV+D+ +LVG+V++ DL+
Sbjct: 6 DIMTA--EVITVSPDLPVEKLASLLWERRISGAPVVDEQGELVGVVTESDLI-------- 55
Query: 147 GRADNSMFPEVDSTWKTF------NEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAA 200
+A P + + +V++ L+K G V D+ T P V T L++ A
Sbjct: 56 DQAKKLHIPTAIAVLEAVIYLERGRKVEEELNKMAGSTVKDICTTKPATVAPDTPLDEIA 115
Query: 201 RLLLETKYRRLPVVD 215
++ E LPV+D
Sbjct: 116 TVMAEKHLHTLPVMD 130
>gi|14521857|ref|NP_127333.1| inosine 5'-monophosphate dehydrogenase [Pyrococcus abyssi GE5]
gi|13878566|sp|Q9UY49.1|IMDH_PYRAB RecName: Full=Inosine-5'-monophosphate dehydrogenase; Short=IMP
dehydrogenase; Short=IMPD; Short=IMPDH
gi|5459077|emb|CAB50563.1| guaB inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) (IMP
dehydrogenase) (IMPDH) (IMPD) [Pyrococcus abyssi GE5]
gi|380742493|tpe|CCE71127.1| TPA: inositol-5-monophosphate dehydrogenase [Pyrococcus abyssi GE5]
Length = 485
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 61/126 (48%), Gaps = 35/126 (27%)
Query: 93 EELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNS 152
E++ + P TVD AL ++ + I G PV++++ K+VG++S D+ A +
Sbjct: 101 EDVITISPEETVDFALFLMEKHDIDGLPVVENE-KVVGIISKKDIAARE----------- 148
Query: 153 MFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLP 212
GK+V +LMT + V E +E+A ++++E + RLP
Sbjct: 149 -----------------------GKLVKELMTKDVITVPENIEVEEALKIMIENRIDRLP 185
Query: 213 VVDADG 218
VVD +G
Sbjct: 186 VVDKEG 191
Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 40/68 (58%), Gaps = 2/68 (2%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V + MT +++ V V+EAL+I++E RI PV+D + +L+GL++ DL+A
Sbjct: 152 VKELMT--KDVITVPENIEVEEALKIMIENRIDRLPVVDKEGRLIGLITMSDLVARKKYK 209
Query: 145 GSGRADNS 152
+ R +N
Sbjct: 210 NAVRDENG 217
>gi|395777450|ref|ZP_10457965.1| putative CBS domain-containing protein [Streptomyces acidiscabies
84-104]
Length = 212
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 65/140 (46%), Gaps = 13/140 (9%)
Query: 80 SGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 139
+G YTV D MT + V T + + ++ ++ PV++ D +++G+VS+ DLL
Sbjct: 3 AGPYTVSDVMT--HTVVAVGRETLFKDVVTLMERWKVAAVPVLEGDGRVIGVVSEADLLP 60
Query: 140 LDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDA 199
+ F E D E L+K G+ M+ V V L +A
Sbjct: 61 KEE-----------FRESDPDRAVQQERLADLAKAGALTAGESMSTPAVTVHADATLPEA 109
Query: 200 ARLLLETKYRRLPVVDADGW 219
AR++ + +RL V+DA+G+
Sbjct: 110 ARIMARRRVKRLYVIDAEGY 129
>gi|298206971|ref|YP_003715150.1| Inosine monophosphate dehydrogenase-related protein [Croceibacter
atlanticus HTCC2559]
gi|83849605|gb|EAP87473.1| Inosine monophosphate dehydrogenase-related protein [Croceibacter
atlanticus HTCC2559]
Length = 154
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 71/143 (49%), Gaps = 28/143 (19%)
Query: 76 AAPSSG---VYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLV 132
A P+ G TV D+M+ K L P+ V E ++ LV+ +I+G PV++D +LVG++
Sbjct: 11 AKPTKGSKEQITVSDYMSRK--LVTFTPSQNVMEVIQTLVKHKISGGPVVNDQNELVGII 68
Query: 133 SDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRE 192
S+ D + IS S R N P D+T V+K MV D+ T +
Sbjct: 69 SEGD--CIKQISDS-RYHN--LPMDDAT------VEK-------HMVRDVET-----IDG 105
Query: 193 TTNLEDAARLLLETKYRRLPVVD 215
N+ DAA L K RR P+V+
Sbjct: 106 NMNIFDAANQFLSAKRRRFPIVE 128
>gi|404496740|ref|YP_006720846.1| hypothetical protein Gmet_1882 [Geobacter metallireducens GS-15]
gi|418065311|ref|ZP_12702685.1| CBS domain containing membrane protein [Geobacter metallireducens
RCH3]
gi|78194344|gb|ABB32111.1| CBS domain pair-containing protein [Geobacter metallireducens
GS-15]
gi|373562489|gb|EHP88700.1| CBS domain containing membrane protein [Geobacter metallireducens
RCH3]
Length = 149
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 66/138 (47%), Gaps = 16/138 (11%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D MTT ++ VK TT+ E EI + R+ PV+D+ L+G+V++ DL+ D
Sbjct: 4 VRDIMTT--DVVSVKRETTIRELAEIFTKHRVGSVPVVDESGNLIGIVTESDLIEQDK-- 59
Query: 145 GSGRADNSMFPEVDST--WKTFNE----VQKLLSKTNGKMVGDLMTPAPVVVRETTNLED 198
+ P V S W + E +K L K G+ VGDL T +V T + +
Sbjct: 60 ------SLHIPTVISLFDWVIYLESEKKFEKELQKMTGQTVGDLYTDTAEMVTPDTPVSE 113
Query: 199 AARLLLETKYRRLPVVDA 216
A ++ K LPVV+
Sbjct: 114 VADIMSSKKLHALPVVEG 131
>gi|419642653|ref|ZP_14174437.1| inosine 5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
jejuni ATCC 33560]
gi|380624217|gb|EIB42879.1| inosine 5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
jejuni ATCC 33560]
Length = 485
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 56/119 (47%), Gaps = 33/119 (27%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P +V EALEI+ E RI+G PV+D+D KL+G++++ DL
Sbjct: 99 VSPKASVAEALEIMAEYRISGVPVVDEDKKLIGILTNRDL------------------RF 140
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVR-ETTNLEDAARLLLETKYRRLPVVD 215
+S + E ++MT P++ + L+DA ++ K +LP+VD
Sbjct: 141 ESDFSNLVE--------------NVMTKMPLITAPKGCTLDDAEKIFSTNKVEKLPIVD 185
>gi|296109848|ref|YP_003616797.1| inosine-5'-monophosphate dehydrogenase [methanocaldococcus infernus
ME]
gi|295434662|gb|ADG13833.1| inosine-5'-monophosphate dehydrogenase [Methanocaldococcus infernus
ME]
Length = 490
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 58/126 (46%), Gaps = 32/126 (25%)
Query: 93 EELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNS 152
+E+ VV P +V EA+E++ ++G PVID D K+VG+++ D+ A+
Sbjct: 98 KEVIVVSPEDSVGEAMELMENYSVSGLPVIDRDEKVVGIITHRDIKAI------------ 145
Query: 153 MFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLP 212
K G V ++MT V +E + ++A ++ + RLP
Sbjct: 146 --------------------KDKGVKVKEVMTKNVVTAKEDISEDEALEIMYSNRVERLP 185
Query: 213 VVDADG 218
+VD +G
Sbjct: 186 IVDDEG 191
Score = 40.4 bits (93), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 27/40 (67%)
Query: 99 KPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 138
K + DEALEI+ R+ P++DD+ KL+G+V+ D+L
Sbjct: 164 KEDISEDEALEIMYSNRVERLPIVDDEGKLIGIVTLRDIL 203
>gi|148260628|ref|YP_001234755.1| signal-transduction protein [Acidiphilium cryptum JF-5]
gi|326403821|ref|YP_004283903.1| hypothetical protein ACMV_16740 [Acidiphilium multivorum AIU301]
gi|338980330|ref|ZP_08631614.1| Signal-transduction protein [Acidiphilium sp. PM]
gi|146402309|gb|ABQ30836.1| putative signal-transduction protein with CBS domains [Acidiphilium
cryptum JF-5]
gi|325050683|dbj|BAJ81021.1| hypothetical protein ACMV_16740 [Acidiphilium multivorum AIU301]
gi|338208767|gb|EGO96602.1| Signal-transduction protein [Acidiphilium sp. PM]
Length = 233
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 65/123 (52%), Gaps = 12/123 (9%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V+P TTV +A I++++ ++ PVID +L+G+++D D+L R + P++
Sbjct: 14 VEPETTVADAGRIMLDQNLSALPVIDRGGRLLGIITDGDMLR--------RPELETAPDI 65
Query: 158 DSTWKTF---NEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVV 214
W+ F + ++T G+ VG++MT V T L DA ++ + ++LPVV
Sbjct: 66 -GWWRGFLAPETSARQFARTRGRHVGEIMTTPVRSVGPDTPLCDAIDIMETYRVKQLPVV 124
Query: 215 DAD 217
+
Sbjct: 125 QGE 127
>gi|405981317|ref|ZP_11039644.1| inosine-5'-monophosphate dehydrogenase [Actinomyces neuii BVS029A5]
gi|404392241|gb|EJZ87301.1| inosine-5'-monophosphate dehydrogenase [Actinomyces neuii BVS029A5]
Length = 501
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 58/122 (47%), Gaps = 30/122 (24%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V PT T+DE ++ R++G PV+D+D L+G++++ DL + S
Sbjct: 101 VHPTATIDELDKLCGHYRVSGLPVVDEDDTLLGIITNRDLRFIPS--------------- 145
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRET-TNLEDAARLLLETKYRRLPVVDA 216
S W V + MTP P++ + + E+A +LL + + +LP++D
Sbjct: 146 -SKWSQMT-------------VQEAMTPMPLITGKVGISREEAKQLLAQHRIEKLPILDE 191
Query: 217 DG 218
DG
Sbjct: 192 DG 193
>gi|383786044|ref|YP_005470613.1| inosine-5'-monophosphate dehydrogenase [Fervidobacterium
pennivorans DSM 9078]
gi|383108891|gb|AFG34494.1| inosine-5'-monophosphate dehydrogenase [Fervidobacterium
pennivorans DSM 9078]
Length = 504
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 67/164 (40%), Gaps = 51/164 (31%)
Query: 73 ANSAAPSSGVYTVGDFMTTKEELH-----------------VVKPTTTVDEALEILVEKR 115
A + A G+ + ++ KE+ H V+ P TV AL ++ E +
Sbjct: 76 AKALAREGGIGIIHKNLSIKEQAHQVEIVKRTENGVIENPVVIHPEDTVFNALNLMAEYK 135
Query: 116 ITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTN 175
I GFPV+DD+ LVGL+++ D+ +
Sbjct: 136 IGGFPVVDDEGHLVGLLTNRDV--------------------------------RFERDV 163
Query: 176 GKMVGDLMTPAP--VVVRETTNLEDAARLLLETKYRRLPVVDAD 217
K V +LMTP +V + +LE A +L E + +LP+VD +
Sbjct: 164 KKKVKELMTPREKLIVAKPGISLEKAKEILHENRIEKLPLVDEN 207
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 40/56 (71%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLAL 140
V + MT +E+L V KP ++++A EIL E RI P++D++ KLVGL++ D+L++
Sbjct: 167 VKELMTPREKLIVAKPGISLEKAKEILHENRIEKLPLVDENNKLVGLITIKDVLSV 222
>gi|383771913|ref|YP_005450978.1| hypothetical protein S23_36670 [Bradyrhizobium sp. S23321]
gi|381360036|dbj|BAL76866.1| hypothetical protein S23_36670 [Bradyrhizobium sp. S23321]
Length = 252
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 58/117 (49%), Gaps = 5/117 (4%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
+ P ++V +A+++++ +G PV D KLVG+V + D L I + +
Sbjct: 14 ISPESSVADAIQLMLSHHFSGLPVTDAGGKLVGIVCESDFLRRTEI-----GTEHVRRRL 68
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVV 214
S + + + K +G+ V +MTP PV V E T L++ A L+ + +PV+
Sbjct: 69 LSLLLGADRIAREFVKEHGQKVEQVMTPDPVTVAEDTPLDEIAALMECRRVNHIPVM 125
>gi|317504769|ref|ZP_07962728.1| inosine-5'-monophosphate dehydrogenase [Prevotella salivae DSM
15606]
gi|315664100|gb|EFV03808.1| inosine-5'-monophosphate dehydrogenase [Prevotella salivae DSM
15606]
Length = 494
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 60/120 (50%), Gaps = 31/120 (25%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
++ ++V +AL ++ + I G PV+DDD KLVG+V++ DL R + M ++
Sbjct: 105 IRRGSSVKDALALMHDYHIGGIPVVDDDNKLVGIVTNRDL----------RFERHMDKKI 154
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
D ++++K N V + T+L AA++L E K +LPVVD D
Sbjct: 155 D----------EVMTKDN-----------LVTTHQQTDLGAAAQILQENKIEKLPVVDKD 193
>gi|117927799|ref|YP_872350.1| signal-transduction protein [Acidothermus cellulolyticus 11B]
gi|117648262|gb|ABK52364.1| putative signal-transduction protein with CBS domains [Acidothermus
cellulolyticus 11B]
Length = 155
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 57/123 (46%), Gaps = 34/123 (27%)
Query: 92 KEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADN 151
K ++ V T V + +LV+ RI+ PV+D +VGLVS++DL+
Sbjct: 8 KAPVYTVDVDTPVADIAHLLVQHRISAVPVVDASGAVVGLVSEHDLI------------- 54
Query: 152 SMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRL 211
S+T GK+ D+M+ + V E T +ED LLL+ + RR+
Sbjct: 55 --------------------SRT-GKVAADIMSTGVISVTEDTEVEDVRHLLLDRRIRRV 93
Query: 212 PVV 214
PVV
Sbjct: 94 PVV 96
>gi|329938560|ref|ZP_08287985.1| hypothetical protein SGM_3477 [Streptomyces griseoaurantiacus M045]
gi|329302533|gb|EGG46424.1| hypothetical protein SGM_3477 [Streptomyces griseoaurantiacus M045]
Length = 243
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 56/112 (50%), Gaps = 12/112 (10%)
Query: 111 LVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDS----TWKTFNE 166
L E R+ G PV+D+D +VG+VS+ DL +A+ + E W T
Sbjct: 30 LAEHRVGGLPVVDEDGHVVGVVSETDLTI-------HQAETRLVHEPPRGRRFAWLT-PR 81
Query: 167 VQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADG 218
++ +K + + G+LMT + V + +AAR ++ + RLPV+D +G
Sbjct: 82 ARRRTAKAHARTAGELMTTPAITVHAQDTVVEAARTMVRHQVHRLPVLDEEG 133
Score = 38.5 bits (88), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Query: 66 FASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDD 125
FA T A + T G+ MTT V TV EA +V ++ PV+D++
Sbjct: 75 FAWLTPRARRRTAKAHARTAGELMTTPAI--TVHAQDTVVEAARTMVRHQVHRLPVLDEE 132
Query: 126 WKLVGLVSDYDLL 138
+LVG+VS +DL+
Sbjct: 133 GRLVGIVSRHDLV 145
>gi|409387294|ref|ZP_11239534.1| Acetoin utilization acuB protein [Lactococcus raffinolactis 4877]
gi|399205601|emb|CCK20449.1| Acetoin utilization acuB protein [Lactococcus raffinolactis 4877]
Length = 219
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 70/133 (52%), Gaps = 20/133 (15%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT K + V PTT V +A +I+ E+ I PVI++D KLVGLV+
Sbjct: 3 VKDFMTKK--VIYVSPTTKVAKAADIMKEQGIHRLPVIEND-KLVGLVT----------- 48
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+G + + P V ++ + E+ LL+KT VG++M + + + +LEDA +
Sbjct: 49 -AGTIEKAS-PSVATSLSVY-EMNYLLNKTT---VGEVMIREVLTISKYASLEDAVYRMR 102
Query: 205 ETKYRRLPVVDAD 217
+ LPVVD D
Sbjct: 103 QNNVGVLPVVDHD 115
>gi|453049496|gb|EME97086.1| putative CBS domain-containing protein [Streptomyces mobaraensis
NBRC 13819 = DSM 40847]
Length = 228
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 65/141 (46%), Gaps = 7/141 (4%)
Query: 79 SSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 138
S G TVGD MT + V E ++ L E R+ PV+ + ++VG+VS DLL
Sbjct: 5 SHGPRTVGDVMT--RTVVAVGRRAVYKEIVKTLAEWRVGTVPVLAGEGRVVGVVSRADLL 62
Query: 139 ALDSISGS-GRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLE 197
+ + GR V + L+K + DLM+ V VR +
Sbjct: 63 SREEFRDEPGREVEG----VGAAVALGRHGADGLAKAAARTAEDLMSAPAVTVRGDATVA 118
Query: 198 DAARLLLETKYRRLPVVDADG 218
+AAR++ + + LPVVDA+G
Sbjct: 119 EAARIMARARVKTLPVVDAEG 139
>gi|319789126|ref|YP_004150759.1| inosine-5'-monophosphate dehydrogenase [Thermovibrio ammonificans
HB-1]
gi|317113628|gb|ADU96118.1| inosine-5'-monophosphate dehydrogenase [Thermovibrio ammonificans
HB-1]
Length = 488
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 61/122 (50%), Gaps = 31/122 (25%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
VKP T+ EA ++ + +I+G PV++D+ KLVG++++ D+ + S
Sbjct: 101 VKPEQTIAEAEALMKKYKISGLPVVNDEGKLVGIITNRDIRFVKDFS------------- 147
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
+ ++++K N + V PV T LE+A +L + K +LPVVD +
Sbjct: 148 -------KRIAEVMTKENLRTV-------PV----GTTLEEAKEILHKYKIEKLPVVDEN 189
Query: 218 GW 219
G+
Sbjct: 190 GY 191
Score = 38.1 bits (87), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 31/49 (63%)
Query: 89 MTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL 137
+ TKE L V TT++EA EIL + +I PV+D++ L GL++ D+
Sbjct: 153 VMTKENLRTVPVGTTLEEAKEILHKYKIEKLPVVDENGYLKGLITIKDI 201
>gi|284043348|ref|YP_003393688.1| hypothetical protein Cwoe_1887 [Conexibacter woesei DSM 14684]
gi|283947569|gb|ADB50313.1| CBS domain containing membrane protein [Conexibacter woesei DSM
14684]
Length = 153
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 69/140 (49%), Gaps = 18/140 (12%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TV D M + + V P +V+ L++L + G PV++ + VG+V++ DL+ +D
Sbjct: 3 TVADIM--ERDPITVSPEDSVETLLKVLRTHELPGVPVVNGGGRPVGIVTEADLVMVDE- 59
Query: 144 SGSGRADNSMFPEVD--------STWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTN 195
D + +D K F E K VGD+MT P+ V T+
Sbjct: 60 ----EEDLRLPLHIDLFGAQIFLGPVKRFEE---RFRKAIAATVGDMMTEDPITVDADTD 112
Query: 196 LEDAARLLLETKYRRLPVVD 215
+++AAR++ E ++ RLPVV+
Sbjct: 113 VKEAARIIAERRHNRLPVVE 132
>gi|297560081|ref|YP_003679055.1| hypothetical protein Ndas_1108 [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
gi|296844529|gb|ADH66549.1| CBS domain containing membrane protein [Nocardiopsis dassonvillei
subsp. dassonvillei DSM 43111]
Length = 221
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 62/135 (45%), Gaps = 12/135 (8%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TVGD MTT + + E + + ++ PV+D +++G+VS DLL
Sbjct: 4 TVGDLMTTS--VLAARDDAGYKELAAFMRDHHVSAVPVVDGGHRVLGVVSTADLLL---- 57
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
AD PE T + F E + K+ G +LMT V V T +AA L+
Sbjct: 58 ---KLADPD--PEEGYTGEPFRERLARI-KSTGTTARELMTSPAVTVTAATAPREAAGLM 111
Query: 204 LETKYRRLPVVDADG 218
+RRLPVVD DG
Sbjct: 112 RRHGFRRLPVVDGDG 126
>gi|403718964|ref|ZP_10943565.1| hypothetical protein KILIM_117_00050 [Kineosphaera limosa NBRC
100340]
gi|403208215|dbj|GAB98248.1| hypothetical protein KILIM_117_00050 [Kineosphaera limosa NBRC
100340]
Length = 199
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 64/117 (54%), Gaps = 16/117 (13%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V+P + +D+AL+++ E+++T PV+D+ LVG++S+ DLL ++ RA + P
Sbjct: 14 VRPDSEIDDALQLMAERKVTALPVVDEGEVLVGVLSEIDLLR-RAVEPDRRA--HVLP-- 68
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVV 214
VQ+ S + VG++MT AP E +++ D L + ++ LPVV
Sbjct: 69 ---------VQE--SAPLPRTVGEIMTSAPRSTTEGSDVADLITLFTTSSFKSLPVV 114
>gi|424828149|ref|ZP_18252890.1| CBS domain-containing protein [Clostridium sporogenes PA 3679]
gi|365979632|gb|EHN15685.1| CBS domain-containing protein [Clostridium sporogenes PA 3679]
Length = 138
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 67/131 (51%), Gaps = 30/131 (22%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D MT + + V +V++A ++ E + P+ +++ K+VG+++D D+ AL S++
Sbjct: 3 VMDVMT--QNVATVNRNDSVEKAAGLMSEYNVGSLPICENN-KVVGVITDRDI-ALRSVA 58
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
R DN++ VGD+MT PVV + ++ DAAR++
Sbjct: 59 K--REDNNI------------------------KVGDIMTSNPVVANKDMDIHDAARIMS 92
Query: 205 ETKYRRLPVVD 215
E + RRLPV D
Sbjct: 93 ERQIRRLPVED 103
>gi|424887354|ref|ZP_18310959.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Rhizobium leguminosarum bv. trifolii
WSM2012]
gi|393175126|gb|EJC75169.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Rhizobium leguminosarum bv. trifolii
WSM2012]
Length = 240
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 67/121 (55%), Gaps = 6/121 (4%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V +T+V EA +++++ RI+G PV+D + LVG+VS+ D L ++ + R + + +
Sbjct: 14 VTASTSVAEAAKLMLDNRISGLPVVDANGTLVGIVSEGDFLRRSELN-TERKRSWLLEWL 72
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
S +E +T+G+ V ++MT + T + +A RL+ +RLPVV A+
Sbjct: 73 ASPRTIADE----YVRTHGRRVEEVMTSPVSAIAPTAAISEAVRLMERRDIKRLPVV-AE 127
Query: 218 G 218
G
Sbjct: 128 G 128
>gi|357024559|ref|ZP_09086708.1| signal-transduction protein [Mesorhizobium amorphae CCNWGS0123]
gi|355543521|gb|EHH12648.1| signal-transduction protein [Mesorhizobium amorphae CCNWGS0123]
Length = 214
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 58/117 (49%), Gaps = 15/117 (12%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P V A I+++ RI+G PV+D+D +LVG+VS+ D L + ++ P
Sbjct: 14 VSPDHGVRHAARIMLDHRISGLPVVDNDGRLVGVVSEGDFLRRSELGVP-----ALLP-- 66
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVV 214
NE + + + K V DLMT +V E T + A L+ E +R+PV+
Sbjct: 67 -------NEARSYVKGHSWK-VSDLMTSDVIVADEDTTIARIAALMQEHGIKRIPVL 115
>gi|326333121|ref|ZP_08199370.1| inosine-5'-monophosphate dehydrogenase [Nocardioidaceae bacterium
Broad-1]
gi|325949104|gb|EGD41195.1| inosine-5'-monophosphate dehydrogenase [Nocardioidaceae bacterium
Broad-1]
Length = 499
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 60/121 (49%), Gaps = 28/121 (23%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
+ P T+++ ++ E RI+GFPV+D D KL+G++++ DL F V
Sbjct: 103 IGPDATLEQLDKLAGEYRISGFPVVDVDQKLIGIITNRDL---------------RFTPV 147
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
+ W T + + SK DL+T + R E+A +LL + K RLP+VD D
Sbjct: 148 -AEWATTKVNEVMTSK-------DLITGPAEISR-----EEATKLLRQHKLERLPLVDTD 194
Query: 218 G 218
G
Sbjct: 195 G 195
>gi|389851878|ref|YP_006354112.1| inosine 5'-monophosphate dehydrogenase [Pyrococcus sp. ST04]
gi|388249184|gb|AFK22037.1| inosine 5'-monophosphate dehydrogenase [Pyrococcus sp. ST04]
Length = 485
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 61/126 (48%), Gaps = 35/126 (27%)
Query: 93 EELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNS 152
E++ + P TV+ AL ++ + I G PV++D K+VG++S D+ A +
Sbjct: 101 EDVITISPEETVEFALFLMEKHDIDGLPVVED-GKVVGIISKKDIAARE----------- 148
Query: 153 MFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLP 212
GK+V DLMT + V E ++E+A ++++E + RLP
Sbjct: 149 -----------------------GKLVKDLMTKEVITVPECVDVEEALKIMIENRIDRLP 185
Query: 213 VVDADG 218
VV+ +G
Sbjct: 186 VVNKEG 191
Score = 44.7 bits (104), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 40/68 (58%), Gaps = 2/68 (2%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D MT +E+ V V+EAL+I++E RI PV++ + KLVGL++ DL+A
Sbjct: 152 VKDLMT--KEVITVPECVDVEEALKIMIENRIDRLPVVNKEGKLVGLITMSDLVARKKYK 209
Query: 145 GSGRADNS 152
+ R +N
Sbjct: 210 NAVRDENG 217
>gi|302526804|ref|ZP_07279146.1| predicted protein [Streptomyces sp. AA4]
gi|302435699|gb|EFL07515.1| predicted protein [Streptomyces sp. AA4]
Length = 200
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 60/130 (46%), Gaps = 25/130 (19%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGS 146
D MT+ E V+P T+ DEA IL E+ PV+DDD +LVG+V++ DL G
Sbjct: 5 DLMTSPAE--TVRPWTSADEAAGILAERGFPALPVVDDDGRLVGIVTEADL-------GR 55
Query: 147 GR--ADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
GR A + P +T VG +MT + +L D R L+
Sbjct: 56 GRTPAPDGRRPYHPGALET--------------TVGAVMTSPAAAMPPGADLADVCRELV 101
Query: 205 ETKYRRLPVV 214
+ K + +P+V
Sbjct: 102 DAKSQAMPIV 111
>gi|15669617|ref|NP_248430.1| inosine-5'-monophosphate dehydrogenase GuaB [Methanocaldococcus
jannaschii DSM 2661]
gi|2496178|sp|Q58821.1|Y1426_METJA RecName: Full=Uncharacterized protein MJ1426
gi|1592076|gb|AAB99437.1| inosine-5'-monophosphate dehydrogenase, (guaB) [Methanocaldococcus
jannaschii DSM 2661]
Length = 168
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 74/143 (51%), Gaps = 12/143 (8%)
Query: 86 GDFMTTKEELH---VVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS 142
G+ M K+ + VV + + + + + +I+G PV++ D KLVG++S+ D++ +
Sbjct: 12 GEIMLIKDIMKKPIVVYEDNDLIDVIRLFRKNKISGAPVLNKDGKLVGIISESDIVK--T 69
Query: 143 ISGSGRADNSMFPE----VDSTWKTFNEVQKLLSKTNGKM---VGDLMTPAPVVVRETTN 195
I N + P ++ KT ++++ + + V D+MT +V +
Sbjct: 70 IVTHNEDLNLILPSPLDLIELPLKTALKIEEFMEDLKNALKTKVRDVMTRKVIVAKPDMT 129
Query: 196 LEDAARLLLETKYRRLPVVDADG 218
+ DAA+L+++ +RLPVVD +G
Sbjct: 130 INDAAKLMVKNNIKRLPVVDDEG 152
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 35/54 (64%), Gaps = 2/54 (3%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 138
V D MT K + V KP T+++A +++V+ I PV+DD+ L+G+V+ DL+
Sbjct: 113 VRDVMTRK--VIVAKPDMTINDAAKLMVKNNIKRLPVVDDEGNLIGIVTRGDLI 164
>gi|299142783|ref|ZP_07035912.1| inosine-5'-monophosphate dehydrogenase [Prevotella oris C735]
gi|298575812|gb|EFI47689.1| inosine-5'-monophosphate dehydrogenase [Prevotella oris C735]
Length = 494
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 60/120 (50%), Gaps = 31/120 (25%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
++ +TV + LE++ + I G PV+DDD KLVG+V++ DL R + M ++
Sbjct: 105 IRRGSTVKDTLELMHDYHIGGIPVVDDDNKLVGIVTNRDL----------RFERRMDKKI 154
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
D ++++K N V + T+L AA++L E K +LPVVD +
Sbjct: 155 D----------EVMTKEN-----------LVTTHQQTDLVAAAQILQENKIEKLPVVDKN 193
>gi|284162397|ref|YP_003401020.1| hypothetical protein Arcpr_1296 [Archaeoglobus profundus DSM 5631]
gi|284012394|gb|ADB58347.1| CBS domain containing membrane protein [Archaeoglobus profundus DSM
5631]
Length = 259
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 61/134 (45%), Gaps = 35/134 (26%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D+MT + + + P TV++A+ ++ E GFPV+D+D LVG VS DLL
Sbjct: 6 VKDYMT--KNVVTLSPENTVEDAIRLIEETGHDGFPVVDEDGMLVGYVSSIDLL------ 57
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+ D T K + D+M V +E L+D AR++
Sbjct: 58 -----------KKDPTMK----------------IKDIMKKEVHVAKEYMPLKDVARVMF 90
Query: 205 ETKYRRLPVVDADG 218
T + +LPVVD G
Sbjct: 91 RTGHSKLPVVDDRG 104
>gi|149179595|ref|ZP_01858119.1| CBS [Planctomyces maris DSM 8797]
gi|148841566|gb|EDL56005.1| CBS [Planctomyces maris DSM 8797]
Length = 147
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 58/132 (43%), Gaps = 29/132 (21%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGS 146
D MT+ P++TV EA ++V+ PV+DD LVG+V+D D+ G
Sbjct: 5 DVMTSNP--ACCSPSSTVQEAASLMVDNDCGEIPVVDDSGALVGVVTDRDIACRCVAKG- 61
Query: 147 GRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLET 206
K++ + V ++MT +PV V ++++ + +
Sbjct: 62 --------------------------KSSDQRVEEVMTSSPVTVTADASVDECCTKMEDN 95
Query: 207 KYRRLPVVDADG 218
+ RRLPVVD G
Sbjct: 96 QVRRLPVVDDKG 107
>gi|160903333|ref|YP_001568914.1| inosine-5'-monophosphate dehydrogenase [Petrotoga mobilis SJ95]
gi|160360977|gb|ABX32591.1| inosine-5'-monophosphate dehydrogenase [Petrotoga mobilis SJ95]
Length = 483
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 72/171 (42%), Gaps = 42/171 (24%)
Query: 51 TSSDRVSALRRSSAVFASGTLTANSAAPSSGVYTVGDFMTTKEELH----VVKPTTTVDE 106
T S A+ R AV G + N + Y V T+ + + P TTV E
Sbjct: 49 TESQMAKAMAREGAV---GVIHKNMSIEQQA-YEVSKVKKTENGIIYDPITITPDTTVKE 104
Query: 107 ALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNE 166
A +I+ E RI G PV+DDD L+G++++ D+ R + +M
Sbjct: 105 AEKIMREYRIGGLPVVDDDKVLLGILTNRDI----------RFEQNM------------- 141
Query: 167 VQKLLSKTNGKMVGDLMTPAP--VVVRETTNLEDAARLLLETKYRRLPVVD 215
K +LMTP VV +LE+A +L + K +LP+VD
Sbjct: 142 ---------EKKAKELMTPYQNLVVAGSHISLEEAKEILHQNKIEKLPIVD 183
>gi|448536098|ref|ZP_21622343.1| peptidase M50 [Halorubrum hochstenium ATCC 700873]
gi|445702541|gb|ELZ54485.1| peptidase M50 [Halorubrum hochstenium ATCC 700873]
Length = 400
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 63/135 (46%), Gaps = 30/135 (22%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TVGD MT +E+LH V +V E + + ++R TG+PV+D D +LVG+V+ D
Sbjct: 255 TVGDVMTPREDLHTVSGDASVAELMSRMFKERHTGYPVLDGD-ELVGMVTLEDA------ 307
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
++ EV++ + + M DL+ P + A + +
Sbjct: 308 ------------------RSVREVERDAYRVDDVMATDLVAADP-----NADALTALQTM 344
Query: 204 LETKYRRLPVVDADG 218
E RLPVVDADG
Sbjct: 345 QEHGVGRLPVVDADG 359
>gi|302867905|ref|YP_003836542.1| CBS domain-containing protein [Micromonospora aurantiaca ATCC
27029]
gi|315505690|ref|YP_004084577.1| cbs domain containing membrane protein [Micromonospora sp. L5]
gi|302570764|gb|ADL46966.1| CBS domain containing protein [Micromonospora aurantiaca ATCC
27029]
gi|315412309|gb|ADU10426.1| CBS domain containing membrane protein [Micromonospora sp. L5]
Length = 232
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 64/133 (48%), Gaps = 11/133 (8%)
Query: 83 YTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS 142
+ V D MT ++ V T E +++LV +RI+G PV+D +++G++S+ DL L
Sbjct: 4 WQVTDVMT--RDVATVTEETPYREVVDVLVRQRISGVPVVDSFRRVLGVISEADL--LHK 59
Query: 143 ISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARL 202
+ SG D E + L+++ DLMT V E +L ARL
Sbjct: 60 VERSGHPDERRVFEGRRRRTAREKAGALVAR-------DLMTAPAVTTHERASLAATARL 112
Query: 203 LLETKYRRLPVVD 215
+ +RLPV+D
Sbjct: 113 MDHEAVKRLPVLD 125
>gi|268679127|ref|YP_003303558.1| inosine-5'-monophosphate dehydrogenase [Sulfurospirillum deleyianum
DSM 6946]
gi|268617158|gb|ACZ11523.1| inosine-5'-monophosphate dehydrogenase [Sulfurospirillum deleyianum
DSM 6946]
Length = 482
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 59/121 (48%), Gaps = 33/121 (27%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
+K T+ +AL I+ E RI+G PV+DD L+G++++ DL R +N
Sbjct: 99 IKAHATLRDALAIMSEYRISGVPVVDDSNTLIGILTNRDL----------RFEN------ 142
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVV-VRETTNLEDAARLLLETKYRRLPVVDA 216
D T K V +LMT P++ V++ T L+DA + K +LPVVD
Sbjct: 143 DYT----------------KNVEELMTKMPLITVKKGTTLDDAEAIFRTNKVEKLPVVDE 186
Query: 217 D 217
D
Sbjct: 187 D 187
Score = 37.0 bits (84), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 29/49 (59%)
Query: 89 MTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL 137
+ TK L VK TT+D+A I ++ PV+D+D KL GL++ DL
Sbjct: 151 LMTKMPLITVKKGTTLDDAEAIFRTNKVEKLPVVDEDNKLSGLITIKDL 199
>gi|186470680|ref|YP_001861998.1| hypothetical protein Bphy_5888 [Burkholderia phymatum STM815]
gi|184196989|gb|ACC74952.1| CBS domain containing membrane protein [Burkholderia phymatum
STM815]
Length = 242
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 67/144 (46%), Gaps = 5/144 (3%)
Query: 71 LTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVG 130
+T A + D MTT + P ++ +A + V+ RI+G PV+D + ++VG
Sbjct: 1 MTTRRAQAKGAIMRALDIMTTS--VVTATPDMSIHDAARLFVDNRISGMPVVDGEGQVVG 58
Query: 131 LVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVV 190
+VS DLL +G+G + +D + E K + +VGD+M + +
Sbjct: 59 IVSQGDLLHRVE-NGTGHGKRRWW--LDFLLSSPREQAARYVKEHAHVVGDVMCDRVISI 115
Query: 191 RETTNLEDAARLLLETKYRRLPVV 214
E L+ A L+ +R+PV+
Sbjct: 116 TEDMPLDRIADLMERRHLKRVPVL 139
>gi|365892398|ref|ZP_09430701.1| conserved hypothetical protein [Bradyrhizobium sp. STM 3809]
gi|365331531|emb|CCE03232.1| conserved hypothetical protein [Bradyrhizobium sp. STM 3809]
Length = 249
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 58/133 (43%), Gaps = 31/133 (23%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA-------------LDSIS 144
V P T V EA I++ I G PV+D +LVG+V+D D L LD +
Sbjct: 14 VTPGTPVAEAARIMLRNHIGGLPVVDAAGQLVGMVTDGDFLRRAELGTERKQGRWLDLLV 73
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
G GR + ++G+ VGD+M+ V V +L + A ++
Sbjct: 74 GRGR------------------IGADFVHSHGRTVGDIMSRPAVTVSSDASLAEIAEVME 115
Query: 205 ETKYRRLPVVDAD 217
+ +RLPV+ D
Sbjct: 116 KRGIKRLPVMSGD 128
>gi|340345572|ref|ZP_08668704.1| Inosine-5'-monophosphate dehydrogenase [Candidatus Nitrosoarchaeum
koreensis MY1]
gi|339520713|gb|EGP94436.1| Inosine-5'-monophosphate dehydrogenase [Candidatus Nitrosoarchaeum
koreensis MY1]
Length = 477
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 71/163 (43%), Gaps = 49/163 (30%)
Query: 73 ANSAAPSSGVYTVGDFMTTKEEL-----------------HVVKPTTTVDEALEILVEKR 115
A + A + G+ + F+T KE+ +V+ T+ +A+ EK
Sbjct: 57 AVAMARAGGIGIIHRFLTIKEQANEVLKVKRSGSVMIENPYVINLDKTIQDAINYAEEKE 116
Query: 116 ITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTN 175
I+G VID + KLVG+V+D DLL E D+T
Sbjct: 117 ISGLLVIDSNSKLVGIVTDRDLLF----------------ETDTTH-------------- 146
Query: 176 GKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADG 218
++ D+MT V + +L++A ++L + + +LP++D +G
Sbjct: 147 --LIKDVMTKDVVTAKLGVSLDEAKKILHQHRIEKLPIIDDNG 187
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 42/85 (49%), Gaps = 11/85 (12%)
Query: 68 SGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTT-----------VDEALEILVEKRI 116
SG L +S + G+ T D + + H++K T +DEA +IL + RI
Sbjct: 118 SGLLVIDSNSKLVGIVTDRDLLFETDTTHLIKDVMTKDVVTAKLGVSLDEAKKILHQHRI 177
Query: 117 TGFPVIDDDWKLVGLVSDYDLLALD 141
P+IDD+ + GL++ D+ ++
Sbjct: 178 EKLPIIDDNGSIKGLITSKDITNIE 202
>gi|25011667|ref|NP_736062.1| hypothetical protein gbs1627 [Streptococcus agalactiae NEM316]
gi|77414837|ref|ZP_00790953.1| AcuB family protein [Streptococcus agalactiae 515]
gi|24413207|emb|CAD47286.1| Unknown [Streptococcus agalactiae NEM316]
gi|77159114|gb|EAO70309.1| AcuB family protein [Streptococcus agalactiae 515]
Length = 219
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 69/137 (50%), Gaps = 21/137 (15%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT K L V P TTV EA ++L E + PV+++D +L+GLV++
Sbjct: 3 VKDFMTKK--LVYVSPDTTVAEAADLLREHHLRRLPVVEND-QLLGLVTE---------G 50
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
A S +T + E+ LL+KT + D+M V V + +LEDA L++
Sbjct: 51 TMAEAQPS-----KATSLSIYEMNYLLNKTK---IRDIMIKDIVTVSQYASLEDAIYLMM 102
Query: 205 ETKYRRLPVVDADGWNY 221
K LPVVD +G Y
Sbjct: 103 SRKIGVLPVVD-NGQLY 118
>gi|336113964|ref|YP_004568731.1| hypothetical protein BCO26_1286 [Bacillus coagulans 2-6]
gi|335367394|gb|AEH53345.1| CBS domain containing membrane protein [Bacillus coagulans 2-6]
Length = 153
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 7/132 (5%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFM ++ VK TT+ E L++L RI G PV+D + KL+G+VSD D++ +
Sbjct: 3 VKDFMI--RDVITVKKETTIRELLKVLAHHRIGGVPVVDAEGKLLGMVSDGDVIRF--LQ 58
Query: 145 GSGRADNSMFPE-VDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
R + V + + FNE KL + + + VR + E+A R+L
Sbjct: 59 PKARTVYDFYITIVVNEQEDFNE--KLAHSLDFPVEKIMKRRELYTVRPEDDFENALRIL 116
Query: 204 LETKYRRLPVVD 215
+ +++LPVV+
Sbjct: 117 AKHHFKKLPVVN 128
>gi|320162383|ref|YP_004175608.1| hypothetical protein ANT_29820 [Anaerolinea thermophila UNI-1]
gi|319996237|dbj|BAJ65008.1| hypothetical protein ANT_29820 [Anaerolinea thermophila UNI-1]
Length = 218
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 61/117 (52%), Gaps = 17/117 (14%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
+ P V EAL + + ++ +PV+D KL+G+V+D DL+ + S ++
Sbjct: 14 ITPDVPVQEALARMRQDKVRRYPVVDKKGKLIGIVTDSDLM-----NASPSEATTL---- 64
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVV 214
S W E+ LLS+ V +MT P+ V E T +E+AAR++ + K LPV+
Sbjct: 65 -SVW----EINYLLSRIT---VERVMTREPITVTEDTTVEEAARIMADNKIGGLPVL 113
Score = 37.0 bits (84), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Query: 102 TTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALD-SISGSGRADNSMFPEVDST 160
TTV+EA I+ + +I G PV+ D+ +LVG++++ DL + + G+ A + EV T
Sbjct: 93 TTVEEAARIMADNKIGGLPVLRDN-RLVGIITETDLFKIFLEMLGARTAGVRVTVEVPDT 151
Query: 161 WKTFNEVQKLLSKTNGKMVG 180
+E+ + + G + G
Sbjct: 152 PGKLHEITGAIYQLGGNISG 171
>gi|374984110|ref|YP_004959605.1| putative CBS domain-containing protein [Streptomyces
bingchenggensis BCW-1]
gi|297154762|gb|ADI04474.1| putative CBS domain protein [Streptomyces bingchenggensis BCW-1]
Length = 223
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 67/138 (48%), Gaps = 17/138 (12%)
Query: 83 YTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS 142
+ V D MT + V + E + + + R++ PV++ + ++VG+VS+ DLL +
Sbjct: 6 HQVSDVMTRT--VVAVGRDASFKEMVRTMGQWRVSAMPVLEGEGRVVGVVSEADLLPKEE 63
Query: 143 ISGSGRADNSMFPEVDSTWKTFNEVQKL--LSKTNGKMVGDLMTPAPVVVRETTNLEDAA 200
DS F ++++L L+K +LM+ V V L +AA
Sbjct: 64 FR-------------DSDPDRFEQLRRLPDLAKAGAVAAEELMSAPAVTVHAEATLAEAA 110
Query: 201 RLLLETKYRRLPVVDADG 218
R++ + +RLPVVD++G
Sbjct: 111 RIMAVRQVKRLPVVDSEG 128
>gi|390444607|ref|ZP_10232382.1| hypothetical protein A3SI_12194 [Nitritalea halalkaliphila LW7]
gi|389664305|gb|EIM75806.1| hypothetical protein A3SI_12194 [Nitritalea halalkaliphila LW7]
Length = 153
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 67/135 (49%), Gaps = 25/135 (18%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TVG M+TK L +P V + +E+ +K+I+G PV+DD KL+G++S+ D L + I
Sbjct: 21 TVGACMSTK--LITFRPEDPVLKVVEVFAQKKISGAPVVDDAGKLIGMISEGDCLQ-EVI 77
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
G+ N+ P+ ST V + MT +++ +L +AA+
Sbjct: 78 --RGKYSNT--PQYPST------------------VENYMTREVRTLQQDMSLFEAAQAF 115
Query: 204 LETKYRRLPVVDADG 218
K RR PV+ A G
Sbjct: 116 RVEKVRRFPVLSASG 130
>gi|206901405|ref|YP_002250467.1| inosine-5'-monophosphate dehydrogenase [Dictyoglomus thermophilum
H-6-12]
gi|206740508|gb|ACI19566.1| inosine-5'-monophosphate dehydrogenase [Dictyoglomus thermophilum
H-6-12]
Length = 493
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 56/119 (47%), Gaps = 33/119 (27%)
Query: 100 PTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDS 159
P TV EAL I+ + I+G PV++ D KLVG+V++ DL R + +M
Sbjct: 105 PEQTVGEALSIMAKYHISGLPVVEKDGKLVGIVTNRDL----------RFETNM------ 148
Query: 160 TWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRET-TNLEDAARLLLETKYRRLPVVDAD 217
K V ++MT ++V + ++DA +L + K +LP+VD D
Sbjct: 149 ----------------NKKVSEIMTKDNLIVAQVGITIKDAQEILQKYKIEKLPIVDKD 191
Score = 38.5 bits (88), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 57/129 (44%), Gaps = 33/129 (25%)
Query: 89 MTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS------ 142
+ TK+ L V + T+ +A EIL + +I P++D D+KL GL++ D+ +
Sbjct: 155 IMTKDNLIVAQVGITIKDAQEILQKYKIEKLPIVDKDFKLRGLITIKDIQKMKQYPNAAK 214
Query: 143 ------ISGSG---------RADNSMFPEVD------------STWKTFNEVQKLLSKTN 175
I+G+ RA + EVD +T NE++KL SK
Sbjct: 215 DKKGRLIAGAAIGVGEEAIKRAKALVEAEVDVIVVDTAHGHHKRVLETVNELKKLFSKEV 274
Query: 176 GKMVGDLMT 184
+ G++ T
Sbjct: 275 VIVAGNVAT 283
>gi|301058318|ref|ZP_07199351.1| CBS domain protein [delta proteobacterium NaphS2]
gi|300447554|gb|EFK11286.1| CBS domain protein [delta proteobacterium NaphS2]
Length = 225
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Query: 103 TVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL-ALDSISGSGRADNSMFPEVDSTW 161
TV+EA E+L+EK I+G PV+D+ K++G+++ DL L S++G G+ EV+
Sbjct: 93 TVEEAAEVLLEKNISGAPVMDEKGKVIGIITKNDLFRVLISLTGVGKRGIQFAFEVEDRP 152
Query: 162 KTFNEVQKLLSKTNGKMVGDLMTPAPV 188
+ E+ ++ + G+MV L T V
Sbjct: 153 GSIRELADVIRRYGGRMVSILSTYENV 179
Score = 42.4 bits (98), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 59/116 (50%), Gaps = 18/116 (15%)
Query: 103 TVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWK 162
++ +A++ + EK I+ PVI KLVG+V+D DL RA S D+T
Sbjct: 19 SMQDAMQRMKEKGISMLPVIKK-GKLVGVVTDRDL---------KRASAS-----DATTL 63
Query: 163 TFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADG 218
+E+ L++K V D+MT P+ + +E+AA +LLE PV+D G
Sbjct: 64 EVHELLFLITKIK---VQDIMTRNPITIPFDFTVEEAAEVLLEKNISGAPVMDEKG 116
>gi|254381628|ref|ZP_04996992.1| CBS [Streptomyces sp. Mg1]
gi|194340537|gb|EDX21503.1| CBS [Streptomyces sp. Mg1]
Length = 214
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 66/138 (47%), Gaps = 18/138 (13%)
Query: 83 YTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS 142
YTV D MT + + E +E++ + +++ PV++ + ++VG+VS+ DLL +
Sbjct: 6 YTVSDVMTHTAV--AIGREASYKEIVELMDQWKVSAVPVLEGEGRVVGVVSEADLLPKEE 63
Query: 143 ISGSGRADNSMFP-EVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAAR 201
R D+ P ++D SK G + +LM+ V V L +AAR
Sbjct: 64 F----RQDDPQLPGQLDEA-----------SKAGGVLAEELMSSPAVTVHPDATLAEAAR 108
Query: 202 LLLETKYRRLPVVDADGW 219
++ +RLPVV+ G
Sbjct: 109 IMARKHVKRLPVVNGVGM 126
>gi|386837900|ref|YP_006242958.1| hypothetical protein SHJG_1810 [Streptomyces hygroscopicus subsp.
jinggangensis 5008]
gi|374098201|gb|AEY87085.1| hypothetical protein SHJG_1810 [Streptomyces hygroscopicus subsp.
jinggangensis 5008]
gi|451791192|gb|AGF61241.1| hypothetical protein SHJGH_1575 [Streptomyces hygroscopicus subsp.
jinggangensis TL01]
Length = 233
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 61/136 (44%), Gaps = 17/136 (12%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D MT + + ++ + + + E R++ PV+DD ++VG+VS+ DLL
Sbjct: 8 VSDVMTRR--VVALRTGAAFKDIVRAMREWRVSALPVLDDAGRVVGVVSEADLLRKQEYG 65
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKL--LSKTNGKMVGDLMTPAPVVVRETTNLEDAARL 202
G G W + + L K + G+LMT V V L AAR+
Sbjct: 66 GGG-----------LDW--YGRARDLTGFRKADAATAGELMTAPAVTVPPDAGLAQAARI 112
Query: 203 LLETKYRRLPVVDADG 218
+ + +RLPVVD G
Sbjct: 113 MARGEVKRLPVVDHAG 128
>gi|302555051|ref|ZP_07307393.1| CBS domain-containing protein [Streptomyces viridochromogenes DSM
40736]
gi|302472669|gb|EFL35762.1| CBS domain-containing protein [Streptomyces viridochromogenes DSM
40736]
Length = 221
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 58/113 (51%), Gaps = 15/113 (13%)
Query: 108 LEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEV 167
+E++ + +++ PV++ + +++G+VS+ DLL + DS F ++
Sbjct: 29 VEVMEQWKVSALPVLEGEGRVIGVVSEADLLFKEEFR-------------DSDPDRFTQL 75
Query: 168 QKL--LSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADG 218
+L L K G DLM+ V V L AAR++ + K +RLPVV+ +G
Sbjct: 76 GRLSDLVKAGGMTAEDLMSSPAVTVHTDATLAQAARIMAQRKVKRLPVVNEEG 128
>gi|14590227|ref|NP_142293.1| inosine 5'-monophosphate dehydrogenase [Pyrococcus horikoshii OT3]
gi|6647544|sp|O58045.1|IMDH_PYRHO RecName: Full=Inosine-5'-monophosphate dehydrogenase; Short=IMP
dehydrogenase; Short=IMPD; Short=IMPDH
gi|109157383|pdb|2CU0|A Chain A, Crystal Structure Of Inosine-5'-Monophosphate
Dehydrogenase From Pyrococcus Horikoshii Ot3
gi|109157384|pdb|2CU0|B Chain B, Crystal Structure Of Inosine-5'-Monophosphate
Dehydrogenase From Pyrococcus Horikoshii Ot3
gi|3256697|dbj|BAA29380.1| 486aa long hypothetical inosine-5'-monophosphate dehydrogenase
[Pyrococcus horikoshii OT3]
Length = 486
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 61/126 (48%), Gaps = 35/126 (27%)
Query: 93 EELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNS 152
E++ + P TVD AL ++ + I G PV++D+ K+VG+++ D+ A +
Sbjct: 101 EDVITIAPDETVDFALFLMEKHGIDGLPVVEDE-KVVGIITKKDIAARE----------- 148
Query: 153 MFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLP 212
GK+V +LMT + V E+ +E+A ++++E + RLP
Sbjct: 149 -----------------------GKLVKELMTKEVITVPESIEVEEALKIMIENRIDRLP 185
Query: 213 VVDADG 218
VVD G
Sbjct: 186 VVDERG 191
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 46/84 (54%), Gaps = 3/84 (3%)
Query: 69 GTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKL 128
G +T A G V + MT +E+ V + V+EAL+I++E RI PV+D+ KL
Sbjct: 137 GIITKKDIAAREG-KLVKELMT--KEVITVPESIEVEEALKIMIENRIDRLPVVDERGKL 193
Query: 129 VGLVSDYDLLALDSISGSGRADNS 152
VGL++ DL+A + R +N
Sbjct: 194 VGLITMSDLVARKKYKNAVRDENG 217
>gi|224535972|ref|ZP_03676511.1| hypothetical protein BACCELL_00836, partial [Bacteroides
cellulosilyticus DSM 14838]
gi|224522427|gb|EEF91532.1| hypothetical protein BACCELL_00836 [Bacteroides cellulosilyticus
DSM 14838]
Length = 273
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 62/121 (51%), Gaps = 31/121 (25%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
+K +TV +AL ++ E RI G PV+DD+ LVG+V++ DL R M +
Sbjct: 104 IKRGSTVGDALALMAEYRIGGIPVVDDERYLVGIVTNRDL----------RFVRDMNKHI 153
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
D ++++K N ++T P TT++E +++L E + +LPVVD +
Sbjct: 154 D----------EVMTKEN------IITTNP-----TTDMEAVSQILQEHRIEKLPVVDKE 192
Query: 218 G 218
G
Sbjct: 193 G 193
Score = 42.4 bits (98), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 31/51 (60%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL 137
D + TKE + PTT ++ +IL E RI PV+D + KLVGL++ D+
Sbjct: 154 DEVMTKENIITTNPTTDMEAVSQILQEHRIEKLPVVDKEGKLVGLITYKDI 204
>gi|413962370|ref|ZP_11401598.1| signal-transduction protein [Burkholderia sp. SJ98]
gi|413931242|gb|EKS70529.1| signal-transduction protein [Burkholderia sp. SJ98]
Length = 228
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 67/129 (51%), Gaps = 6/129 (4%)
Query: 86 GDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISG 145
D MTT + P +V +A +V I+G PVID++ L+G+V++ DL+ I G
Sbjct: 6 ADIMTTS--IVSASPDMSVRQAAGTMVFAGISGMPVIDEEGNLLGIVTEGDLMHRAEI-G 62
Query: 146 SGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLE 205
+G + + E+ ++ + E+ K + + V D+MT V ET + D A LL
Sbjct: 63 TGVKQRAWWLELVASTR---ELASQYVKEHARKVSDVMTTDVATVSETCPVADIAELLER 119
Query: 206 TKYRRLPVV 214
+ +R+PV+
Sbjct: 120 KRIKRVPVL 128
>gi|283954622|ref|ZP_06372140.1| inosine-5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
jejuni 414]
gi|283793814|gb|EFC32565.1| inosine-5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
jejuni 414]
Length = 485
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 57/122 (46%), Gaps = 33/122 (27%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P +V +ALEI+ E RI+G PV+D++ KL+G++++ DL
Sbjct: 99 VNPKASVAKALEIMAEYRISGVPVVDENQKLIGILTNRDL------------------RF 140
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVR-ETTNLEDAARLLLETKYRRLPVVDA 216
+S + E ++MT P++ + L+DA ++ K +LP+VD
Sbjct: 141 ESDFSNLVE--------------NVMTKMPLITAPKGCTLDDAEKIFSTNKVEKLPIVDE 186
Query: 217 DG 218
G
Sbjct: 187 QG 188
>gi|452853189|ref|YP_007494873.1| CBS domain containing protein [Desulfovibrio piezophilus]
gi|451896843|emb|CCH49722.1| CBS domain containing protein [Desulfovibrio piezophilus]
Length = 222
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 59/116 (50%), Gaps = 16/116 (13%)
Query: 101 TTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDST 160
++V +A EIL EK I FPVID+ +LVG+VSD D+ A S F D+
Sbjct: 17 NSSVMDAAEILREKNIRQFPVIDNKARLVGIVSDRDI---------RDAMPSKFLPGDAV 67
Query: 161 WKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDA 216
+ + L + GD+MT P+ V T +++ A +L++ K LPVVD
Sbjct: 68 CERGGGLYTLTA-------GDIMTLDPITVPSDTAVDEVANILVQHKVGGLPVVDG 116
Score = 36.6 bits (83), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 81 GVYTV--GDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 138
G+YT+ GD MT V T VDE ILV+ ++ G PV+ D +L+G+++ D+L
Sbjct: 73 GLYTLTAGDIMTLDP--ITVPSDTAVDEVANILVQHKVGGLPVV-DGGELMGIITQADVL 129
>gi|322385954|ref|ZP_08059594.1| CBS domain protein [Streptococcus cristatus ATCC 51100]
gi|417922506|ref|ZP_12565994.1| CBS domain protein [Streptococcus cristatus ATCC 51100]
gi|321269937|gb|EFX52857.1| CBS domain protein [Streptococcus cristatus ATCC 51100]
gi|342832603|gb|EGU66898.1| CBS domain protein [Streptococcus cristatus ATCC 51100]
Length = 218
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 71/131 (54%), Gaps = 20/131 (15%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT K + + P TT+ A +I+ ++++ PVI++D KLVGLV++ +I+
Sbjct: 3 VKDFMTRK--VVYISPDTTIAHAADIMRDQKLHRLPVIEND-KLVGLVTE------GTIA 53
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+ + +T + E+ LL+KT V D+M V + + +LEDA L+L
Sbjct: 54 EASPSK--------ATSLSIYEMNYLLNKTK---VKDVMIHDVVTISQYASLEDATYLML 102
Query: 205 ETKYRRLPVVD 215
+ K LPVVD
Sbjct: 103 KNKIGILPVVD 113
>gi|297197540|ref|ZP_06914937.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
gi|197715588|gb|EDY59622.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
Length = 234
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 59/118 (50%), Gaps = 8/118 (6%)
Query: 102 TTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGS--GRADNSMFPEVDS 159
T E +L + RI+G PV+D+D K++G++S+ DL+ + + G P +
Sbjct: 12 TPFKEVARLLADHRISGLPVVDEDDKVIGVISETDLVVRQAATPDPFGPPRRRWLPALTR 71
Query: 160 TWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
+ ++ +K + G LMT PV V ++ +AAR + + RLPV+D +
Sbjct: 72 S------ARQQAAKVEARTAGRLMTEPPVTVHADDSIVEAARTMAQRCVERLPVLDEE 123
>gi|412986258|emb|CCO17458.1| inosine-5'-monophosphate dehydrogenase [Bathycoccus prasinos]
Length = 399
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 82/195 (42%), Gaps = 42/195 (21%)
Query: 42 GCRVFSVLATSSDRVSAL---------------RRSSAVFASGTLTANSAAPSSGVYTVG 86
G R F V ++SSD + R SA A ++ AA S V
Sbjct: 29 GQRAFKVFSSSSDNETTFEGGEKEIGKLHLDGGRSMSASKAEDPDMSDEAAISWPYSRVE 88
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGS 146
+FMT E + + D ++ + KR G PV+D+D LVG++S D+ L IS
Sbjct: 89 EFMTKDPET-LCESLKLTDVKVKSFI-KRYHGGPVVDEDGNLVGVISRNDVKRLSYIS-- 144
Query: 147 GRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLET 206
F E Q+ + + V D MT P+ V + AA L+L+
Sbjct: 145 -----------------FGEEQRHI-----RTVADAMTSMPLTVGPKAYISAAAGLMLKH 182
Query: 207 KYRRLPVVDADGWNY 221
K RLPVV+ +G +Y
Sbjct: 183 KIHRLPVVE-EGEDY 196
>gi|254381637|ref|ZP_04997001.1| CBS [Streptomyces sp. Mg1]
gi|194340546|gb|EDX21512.1| CBS [Streptomyces sp. Mg1]
Length = 216
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 61/136 (44%), Gaps = 13/136 (9%)
Query: 83 YTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS 142
YTV D MT + + V E + ++T PVI+ + ++VG+VS+ DLL +
Sbjct: 6 YTVNDVMT--KTVVTVTAAAEFKEIATAMERWKVTAVPVIEGEGRVVGVVSEADLLTKEE 63
Query: 143 ISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARL 202
G P + + + +K LMT V +R L AARL
Sbjct: 64 FHAQG-------PSLIEQMRRLGDT----AKAGSVRAEQLMTSPAVTIRPDATLPRAARL 112
Query: 203 LLETKYRRLPVVDADG 218
+ + +RLPVVDA+G
Sbjct: 113 MADRHIKRLPVVDANG 128
>gi|146320503|ref|YP_001200214.1| hypothetical protein SSU98_0656 [Streptococcus suis 98HAH33]
gi|253751473|ref|YP_003024614.1| hypothetical protein SSUSC84_0586 [Streptococcus suis SC84]
gi|253753374|ref|YP_003026515.1| hypothetical protein SSU0613 [Streptococcus suis P1/7]
gi|253755797|ref|YP_003028937.1| hypothetical protein SSUBM407_1211 [Streptococcus suis BM407]
gi|386577642|ref|YP_006074048.1| hypothetical protein [Streptococcus suis GZ1]
gi|386579699|ref|YP_006076104.1| hypothetical protein SSUJS14_0746 [Streptococcus suis JS14]
gi|386581647|ref|YP_006078051.1| hypothetical protein SSU12_0612 [Streptococcus suis SS12]
gi|386587880|ref|YP_006084281.1| hypothetical protein SSUA7_0611 [Streptococcus suis A7]
gi|403061284|ref|YP_006649500.1| hypothetical protein YYK_02915 [Streptococcus suis S735]
gi|145691309|gb|ABP91814.1| hypothetical protein SSU98_0656 [Streptococcus suis 98HAH33]
gi|251815762|emb|CAZ51364.1| conserved hypothetical protein [Streptococcus suis SC84]
gi|251818261|emb|CAZ56069.1| conserved hypothetical protein [Streptococcus suis BM407]
gi|251819620|emb|CAR45355.1| conserved hypothetical protein [Streptococcus suis P1/7]
gi|292558105|gb|ADE31106.1| hypothetical protein SSGZ1_0647 [Streptococcus suis GZ1]
gi|319757891|gb|ADV69833.1| hypothetical protein SSUJS14_0746 [Streptococcus suis JS14]
gi|353733793|gb|AER14803.1| hypothetical protein SSU12_0612 [Streptococcus suis SS12]
gi|354985041|gb|AER43939.1| hypothetical protein SSUA7_0611 [Streptococcus suis A7]
gi|402808610|gb|AFR00102.1| hypothetical protein YYK_02915 [Streptococcus suis S735]
Length = 218
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 70/132 (53%), Gaps = 20/132 (15%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
+V DFMT K + + P TTV A +I+ E+ + PVI++D KLVGLV++ +I
Sbjct: 2 SVKDFMTRK--VVYISPDTTVAHAADIMREQDLHRLPVIEND-KLVGLVTE------GTI 52
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
+ + + +T + E+ LL+KT V D+M + V +LEDAA L+
Sbjct: 53 AEASPSK--------ATSLSIYEMNYLLNKTK---VKDVMIKNVITVSGYASLEDAAYLM 101
Query: 204 LETKYRRLPVVD 215
+ K LPVVD
Sbjct: 102 YKNKVGILPVVD 113
>gi|410694908|ref|YP_003625530.1| Conserved hypothetical protein; putative CBS
(cystathionine-beta-synthase) domain [Thiomonas sp. 3As]
gi|294341333|emb|CAZ89748.1| Conserved hypothetical protein; putative CBS
(cystathionine-beta-synthase) domain [Thiomonas sp. 3As]
Length = 159
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 57/126 (45%), Gaps = 14/126 (11%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
+ P T V E IL+E RI G PV D L+G+V++ DL+ RA +
Sbjct: 14 IAPETPVAEIARILIEHRINGVPVTDAGGHLLGIVTEGDLV--------HRAADERLEPR 65
Query: 158 DSTWK------TFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRL 211
+S WK F K G+ +MT + V +N+ AARLL + + L
Sbjct: 66 ESLWKENFYRSVFRRHTPEPDKAEGRTAEQVMTREVLTVAPDSNVTVAARLLADHNIKSL 125
Query: 212 PVVDAD 217
PV++ +
Sbjct: 126 PVIEHE 131
>gi|448720835|ref|ZP_21703434.1| peptidase M50 [Halobiforma nitratireducens JCM 10879]
gi|445780839|gb|EMA31711.1| peptidase M50 [Halobiforma nitratireducens JCM 10879]
Length = 399
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 41/65 (63%), Gaps = 4/65 (6%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVID-DDW---KLVGLVSDYDLLA 139
TV D MT EELH V P TT+ E ++ + +R TG+PV++ D+W +L+GLV+ D
Sbjct: 251 TVADIMTRAEELHTVGPETTISELVQRMFRERHTGYPVVERDNWGDDRLIGLVTLDDARE 310
Query: 140 LDSIS 144
+D +
Sbjct: 311 IDPVE 315
>gi|376296861|ref|YP_005168091.1| hypothetical protein DND132_2083 [Desulfovibrio desulfuricans
ND132]
gi|323459423|gb|EGB15288.1| CBS domain containing membrane protein [Desulfovibrio desulfuricans
ND132]
Length = 224
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 73/133 (54%), Gaps = 19/133 (14%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V ++MT +++ + P ++ +A +++ +K I+ PV+D+ +++G+VSD D+
Sbjct: 3 VANWMT--KDVITITPERSMMKASKLMKDKAISRLPVVDESGRIIGIVSDRDI------- 53
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
D S P +T +E+ LLS+ + D+MT V +R+T +E AA L+L
Sbjct: 54 ----KDAS--PSKATTLDV-HELYYLLSEIK---IADIMTKKVVTIRDTETVEKAAVLML 103
Query: 205 ETKYRRLPVVDAD 217
E + LPVVD +
Sbjct: 104 EGNFGGLPVVDEN 116
Score = 37.7 bits (86), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 38/62 (61%), Gaps = 3/62 (4%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL-ALDSI 143
+ D MT K + ++ T TV++A +++E G PV+D++ +VG+++D D+ L I
Sbjct: 78 IADIMTKK--VVTIRDTETVEKAAVLMLEGNFGGLPVVDENDHVVGIITDTDIFKVLVEI 135
Query: 144 SG 145
SG
Sbjct: 136 SG 137
>gi|86361220|ref|YP_473107.1| hypothetical protein RHE_PF00490 [Rhizobium etli CFN 42]
gi|86285322|gb|ABC94380.1| hypothetical conserved protein [Rhizobium etli CFN 42]
Length = 225
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 70/129 (54%), Gaps = 9/129 (6%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGS 146
D MTT + + P +V A+ ++++ ++G PV+DD ++ G+V++ DLL + +
Sbjct: 5 DIMTTT--VVSISPDVSVRHAVAMMLQNHVSGLPVVDDHGRVCGMVTEGDLLLRREVRYA 62
Query: 147 GRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLET 206
R + PE+ S ++++ + +NG V D+M+ +V R + + D A L
Sbjct: 63 PRPARA--PELISEI----DLERYIG-SNGWCVADVMSQDVIVARPDSEVSDIAESLQVH 115
Query: 207 KYRRLPVVD 215
+ +RLP+V+
Sbjct: 116 RIKRLPIVE 124
>gi|389689835|ref|ZP_10178948.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Microvirga sp. WSM3557]
gi|388589965|gb|EIM30252.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Microvirga sp. WSM3557]
Length = 239
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 61/123 (49%), Gaps = 13/123 (10%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V+P+ TV EA +++ RI+G PV D LVG++S+ DLL + G+ R
Sbjct: 14 VEPSATVAEAARLMLADRISGLPVTTRDGTLVGMISEGDLLRRGEL-GTDRK-------- 64
Query: 158 DSTWKTF----NEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPV 213
S+W F + +T+G+ V +M+ PV R LE+ + +RLPV
Sbjct: 65 RSSWLEFLVGPGTLADEYVRTHGRKVEQVMSGDPVTTRRDAPLEEVVTAMGRHGIKRLPV 124
Query: 214 VDA 216
+++
Sbjct: 125 LES 127
>gi|377820764|ref|YP_004977135.1| signal-transduction protein [Burkholderia sp. YI23]
gi|357935599|gb|AET89158.1| signal-transduction protein [Burkholderia sp. YI23]
Length = 230
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 66/129 (51%), Gaps = 6/129 (4%)
Query: 86 GDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISG 145
D MTT + P TV +A + +V I+G PVI++ +LVG+V++ DLL I G
Sbjct: 4 ADIMTTS--VITADPEMTVRDAAKTMVLGHISGMPVINETGRLVGMVTEGDLLHRQEI-G 60
Query: 146 SGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLE 205
+G + + E+ S + E+ K + V D+M+ V V E + + A LL
Sbjct: 61 TGFKHRAWWLELLS---STRELASQYIKEHAGKVKDVMSTEVVTVDENCTVAELAELLER 117
Query: 206 TKYRRLPVV 214
+ +R+PV+
Sbjct: 118 RRIKRVPVM 126
>gi|188584946|ref|YP_001916491.1| hypothetical protein Nther_0305 [Natranaerobius thermophilus
JW/NM-WN-LF]
gi|179349633|gb|ACB83903.1| CBS domain containing membrane protein [Natranaerobius thermophilus
JW/NM-WN-LF]
Length = 147
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 71/132 (53%), Gaps = 12/132 (9%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS-ISG 145
D M+T ++ V P +TV+EA +++ ++ I+G PVI+ LVG++++ DLL IS
Sbjct: 5 DIMST--DIVTVSPESTVEEAAKLMADREISGIPVINSQNDLVGIITEGDLLGKHKRISP 62
Query: 146 SGRAD---NSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARL 202
G + +F E S + F +++K ++ V DLM+ V V +E+ A
Sbjct: 63 PGYIEFLGGIVFTE--SQDEFFEQLRKYVA----TQVKDLMSDQVVTVGPEAGIEEIATT 116
Query: 203 LLETKYRRLPVV 214
+ + +RLPVV
Sbjct: 117 MDQKNVKRLPVV 128
>gi|300728337|ref|ZP_07061702.1| inosine-5'-monophosphate dehydrogenase [Prevotella bryantii B14]
gi|299774402|gb|EFI71029.1| inosine-5'-monophosphate dehydrogenase [Prevotella bryantii B14]
Length = 494
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 57/116 (49%), Gaps = 33/116 (28%)
Query: 103 TVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWK 162
TV +AL+++ E I G PV+D+D LVG+V++ DL R + M ++D
Sbjct: 110 TVKDALDMMAEYHIGGIPVVDEDNHLVGIVTNRDL----------RFERRMDRKID---- 155
Query: 163 TFNEVQKLLSKTNGKMVGDLMTPAPVV-VRETTNLEDAARLLLETKYRRLPVVDAD 217
D+MT +V + T+L AA++L E K +LPVVDA+
Sbjct: 156 ------------------DVMTKENLVTTHQQTDLLAAAQILQENKIEKLPVVDAE 193
>gi|408490629|ref|YP_006866998.1| CBS_pair domain superfamily protein [Psychroflexus torquis ATCC
700755]
gi|408467904|gb|AFU68248.1| CBS_pair domain superfamily protein [Psychroflexus torquis ATCC
700755]
Length = 157
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 72/134 (53%), Gaps = 25/134 (18%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TV D M+ + + + ++ E +EIL++ R++G PV+DD +++G++S+ D + I
Sbjct: 22 TVRDCMS--QNMILFNKAQSIIEVVEILIKFRVSGGPVVDDQKRVIGIISEGD--CVKQI 77
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
S S R N +V V+K +SK ++ T +P V +L DAA L
Sbjct: 78 SES-RYYNMPMEDVS--------VEKYMSK-------EVNTISPDV-----SLFDAANLF 116
Query: 204 LETKYRRLPVVDAD 217
L++K RR PVV+ D
Sbjct: 117 LKSKRRRFPVVEND 130
>gi|262283196|ref|ZP_06060963.1| CBS domain-containing protein [Streptococcus sp. 2_1_36FAA]
gi|262261448|gb|EEY80147.1| CBS domain-containing protein [Streptococcus sp. 2_1_36FAA]
Length = 218
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 71/133 (53%), Gaps = 20/133 (15%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT K + + P TTV A +I+ E+ + PVI++D KLVGLV++ +I+
Sbjct: 3 VKDFMTRK--VVYISPDTTVAHAADIMREQGLHRLPVIEND-KLVGLVTE------GTIA 53
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+ + +T + E+ LL+KT K D+M + V + +LEDA L+L
Sbjct: 54 EASPSK--------ATSLSIYEMNYLLNKTKIK---DVMIRKVITVSQYASLEDAIYLML 102
Query: 205 ETKYRRLPVVDAD 217
+ K LPVVD +
Sbjct: 103 KNKVGILPVVDNE 115
>gi|156743706|ref|YP_001433835.1| hypothetical protein Rcas_3778 [Roseiflexus castenholzii DSM 13941]
gi|156235034|gb|ABU59817.1| CBS domain containing protein [Roseiflexus castenholzii DSM 13941]
Length = 225
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 69/134 (51%), Gaps = 21/134 (15%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D+M+T V+ PTTT+ EA ++ ++RI PV+++ KL+G+++ DL A
Sbjct: 6 VADWMSTPAI--VIAPTTTLAEAQRLMEQRRIRRLPVVENG-KLIGIITRGDLRAAQP-- 60
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
AD ++ ++ E + LL + V + MT V + + DAARL+L
Sbjct: 61 ----ADTTL---------SYYEWRALLDRVT---VVECMTRHVVTITPDASALDAARLML 104
Query: 205 ETKYRRLPVVDADG 218
K LPVVD +G
Sbjct: 105 TYKIGGLPVVDDEG 118
>gi|350559480|ref|ZP_08928320.1| putative signal transduction protein with CBS domains
[Thioalkalivibrio thiocyanoxidans ARh 4]
gi|349781748|gb|EGZ36031.1| putative signal transduction protein with CBS domains
[Thioalkalivibrio thiocyanoxidans ARh 4]
Length = 143
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 63/130 (48%), Gaps = 31/130 (23%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
+ D MT ++ L VV+P TVD+ I+ E RI PV+D L+GLV+ D+L ++
Sbjct: 4 ISDIMTPRQNLVVVQPDATVDDVRRIMAEHRIRHVPVLDASGALLGLVARTDVL----LA 59
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
GS + +EV MV DL T V E +N+ +AA L+L
Sbjct: 60 GS------------DGPRQVHEV----------MVHDLDT-----VDERSNVRNAAVLML 92
Query: 205 ETKYRRLPVV 214
+ K LPV+
Sbjct: 93 QRKRSCLPVI 102
>gi|15643592|ref|NP_228638.1| hypothetical protein TM0829 [Thermotoga maritima MSB8]
gi|418045001|ref|ZP_12683097.1| CBS domain containing membrane protein [Thermotoga maritima MSB8]
gi|4981361|gb|AAD35911.1|AE001750_5 conserved hypothetical protein [Thermotoga maritima MSB8]
gi|351678083|gb|EHA61230.1| CBS domain containing membrane protein [Thermotoga maritima MSB8]
Length = 150
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 60/114 (52%), Gaps = 8/114 (7%)
Query: 103 TVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL-ALDSISGSGRADNSMFPEVDSTW 161
TV+ +++L + ++G PV+D D ++VG VS+ DL+ AL S S P+
Sbjct: 19 TVETVIKLLSRQNLSGVPVVDHDMRVVGFVSESDLIKALVPSYFSLLRSASFIPDT---- 74
Query: 162 KTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVD 215
N++ + + K + V + M PVVV+E L AA L+ ++ LPVVD
Sbjct: 75 ---NQLIRNVVKIKDRPVSEFMNKPPVVVKEDDPLIVAADYLIRHGFKSLPVVD 125
>gi|157151138|ref|YP_001450902.1| acetoin utilization putative/CBS domain-containing protein
[Streptococcus gordonii str. Challis substr. CH1]
gi|157075932|gb|ABV10615.1| acetoin utilization putative/CBS domain protein [Streptococcus
gordonii str. Challis substr. CH1]
Length = 218
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 71/133 (53%), Gaps = 20/133 (15%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT K + + P TTV A +I+ E+ + PVI++D KLVGLV++ +I+
Sbjct: 3 VKDFMTRK--VVYISPDTTVAHAADIMREQGLHRLPVIEND-KLVGLVTE------GTIA 53
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+ + +T + E+ LL+KT K D+M + V + +LEDA L+L
Sbjct: 54 EASPSK--------ATSLSIYEMNYLLNKTKIK---DVMIRKVITVSQYASLEDAIYLML 102
Query: 205 ETKYRRLPVVDAD 217
+ K LPVVD +
Sbjct: 103 KNKVGILPVVDNE 115
>gi|403739465|ref|ZP_10951846.1| hypothetical protein AUCHE_16_00320 [Austwickia chelonae NBRC
105200]
gi|403190668|dbj|GAB78616.1| hypothetical protein AUCHE_16_00320 [Austwickia chelonae NBRC
105200]
Length = 201
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 56/111 (50%), Gaps = 16/111 (14%)
Query: 104 VDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKT 163
++EAL++L E+RIT PV+ D K+VG++S+ D+L ++ RA + E
Sbjct: 20 LNEALQLLAERRITAVPVVGSDNKVVGVLSEIDILR-RAVEPDARAHATPLAE------- 71
Query: 164 FNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVV 214
S+ K VG++MT P E ++ D L T ++ LPVV
Sbjct: 72 --------SEPLPKTVGEIMTADPRTTTEGADVSDLIDLFTHTSFKSLPVV 114
>gi|15607007|ref|NP_214389.1| inosine monophosphate dehydrogenase [Aquifex aeolicus VF5]
gi|6016372|sp|O67820.1|IMDH_AQUAE RecName: Full=Inosine-5'-monophosphate dehydrogenase; Short=IMP
dehydrogenase; Short=IMPD; Short=IMPDH
gi|2984252|gb|AAC07779.1| inosine monophosphate dehydrogenase [Aquifex aeolicus VF5]
Length = 490
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 61/121 (50%), Gaps = 29/121 (23%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
VKP T V EAL+I+ + +I+G PV+D++ KL+G++++ DL + PE
Sbjct: 103 VKPDTRVKEALDIMAKYKISGVPVVDEERKLIGILTNRDLRFIK-------------PED 149
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
S V + ++K N + AP E L++A + + K +LP+VD +
Sbjct: 150 YS-----KPVSEFMTKEN-------LITAP----EGITLDEAEEIFRKYKIEKLPIVDKE 193
Query: 218 G 218
G
Sbjct: 194 G 194
Score = 37.4 bits (85), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 138
V +FMT KE L T+DEA EI + +I P++D + K+ GL++ D++
Sbjct: 154 VSEFMT-KENLITAPEGITLDEAEEIFRKYKIEKLPIVDKEGKIKGLITIKDIV 206
>gi|410029632|ref|ZP_11279462.1| hypothetical protein MaAK2_10523 [Marinilabilia sp. AK2]
Length = 152
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 59/133 (44%), Gaps = 25/133 (18%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D M+T L ++D LE+L +++I+G PV+D D +L+G++S+ D L I
Sbjct: 22 VKDHMST--SLVTFHAEDSIDHVLEVLTKRKISGAPVVDKDGRLIGIISEVD--CLKEII 77
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
++ FP V D MT + +L DAA+ L
Sbjct: 78 KGKYSNTPKFPGT---------------------VADHMTEDVFTLSPDLSLFDAAQKFL 116
Query: 205 ETKYRRLPVVDAD 217
E K RR PV+ D
Sbjct: 117 ELKIRRFPVLKDD 129
>gi|170289451|ref|YP_001739689.1| CBS domain-containing protein [Thermotoga sp. RQ2]
gi|170176954|gb|ACB10006.1| CBS domain containing membrane protein [Thermotoga sp. RQ2]
Length = 215
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 68/134 (50%), Gaps = 20/134 (14%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT + P T+ EAL+++ + +I V+ D+ K+VG+V++ DLL +
Sbjct: 3 VKDFMTRNP--ITIAPETSFSEALKLMKQNKIKRLIVMKDE-KIVGIVTEKDLLY----A 55
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+A + W E+ LLSK + ++MT V V E T +EDAAR++
Sbjct: 56 SPSKATTL------NIW----ELHYLLSKLK---IEEIMTKDVVTVNENTPIEDAARIME 102
Query: 205 ETKYRRLPVVDADG 218
E LPVVD G
Sbjct: 103 EKDISGLPVVDDAG 116
Score = 36.6 bits (83), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL-ALDSISGSGR 148
V T +++A I+ EK I+G PV+DD LVG+++ D+ I G+ R
Sbjct: 88 VNENTPIEDAARIMEEKDISGLPVVDDAGHLVGIITQTDIFKVFVEIFGTKR 139
>gi|383764645|ref|YP_005443627.1| hypothetical protein CLDAP_36900 [Caldilinea aerophila DSM 14535 =
NBRC 104270]
gi|381384913|dbj|BAM01730.1| hypothetical protein CLDAP_36900 [Caldilinea aerophila DSM 14535 =
NBRC 104270]
Length = 209
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 60/121 (49%), Gaps = 17/121 (14%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
+ P T EAL+++ +++ PV+D K+VG+VS+ DLL + S+
Sbjct: 8 ISPDTPFQEALKLMRDRKFRRLPVVDATGKIVGIVSERDLL-----HAAPSPATSL---- 58
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
S W EV LL K V D+MT V + + +EDAA L++ K LPVVD
Sbjct: 59 -SVW----EVNYLLWKLK---VSDIMTRNVVTINQNMPIEDAASLMVTRKIGGLPVVDDG 110
Query: 218 G 218
G
Sbjct: 111 G 111
Score = 36.6 bits (83), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 46/93 (49%), Gaps = 3/93 (3%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL-ALDSI 143
V D MT + + +++A ++V ++I G PV+DD +VG++++ D+ A +
Sbjct: 72 VSDIMT--RNVVTINQNMPIEDAASLMVTRKIGGLPVVDDGGAIVGVITETDIFKAFVEM 129
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNG 176
G G + EV S T ++ +S+ G
Sbjct: 130 LGGGEHGLRLTVEVPSGPGTLAKLASRISELGG 162
>gi|359403122|ref|ZP_09196029.1| inosine-5'-monophosphate dehydrogenase [Spiroplasma melliferum KC3]
gi|438118358|ref|ZP_20871335.1| inosine 5'-monophosphate dehydrogenase [Spiroplasma melliferum
IPMB4A]
gi|357968339|gb|EHJ90848.1| inosine-5'-monophosphate dehydrogenase [Spiroplasma melliferum KC3]
gi|434155785|gb|ELL44703.1| inosine 5'-monophosphate dehydrogenase [Spiroplasma melliferum
IPMB4A]
Length = 481
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 59/118 (50%), Gaps = 31/118 (26%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
+KPT TV +A I+ + RI+G P++D++ KL+G++++ D+ A ++ S
Sbjct: 98 LKPTMTVQDAENIMAQYRISGLPIVDEENKLLGIITNRDIRACHDLTAS----------- 146
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVD 215
V K ++ V +L+T E +LE A +LL + +LP+V+
Sbjct: 147 ---------VDKFMT------VKNLIT-----THENIDLEQAKDILLNNRIEKLPIVN 184
>gi|154175518|ref|YP_001407770.1| inosine 5'-monophosphate dehydrogenase [Campylobacter curvus
525.92]
gi|402546873|ref|ZP_10843746.1| IMP dehydrogenase [Campylobacter sp. FOBRC14]
gi|112802503|gb|EAT99847.1| inosine-5'-monophosphate dehydrogenase [Campylobacter curvus
525.92]
gi|401016708|gb|EJP75471.1| IMP dehydrogenase [Campylobacter sp. FOBRC14]
Length = 482
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 60/122 (49%), Gaps = 33/122 (27%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
+KP +V EAL ++ + I+G PV+D++ KL+G++++ DL
Sbjct: 99 IKPEASVGEALSLMSDLHISGVPVVDEEHKLIGILTNRDL-------------------- 138
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVR-ETTNLEDAARLLLETKYRRLPVVDA 216
++T V +V D MT AP++ + L+DA ++ + + +LP+VD
Sbjct: 139 --RFETDKSV----------LVKDRMTKAPLITAPKGCTLDDAEKIFSQNRVEKLPIVDE 186
Query: 217 DG 218
+G
Sbjct: 187 NG 188
>gi|119717867|ref|YP_924832.1| inosine-5'-monophosphate dehydrogenase [Nocardioides sp. JS614]
gi|119538528|gb|ABL83145.1| inosine-5'-monophosphate dehydrogenase [Nocardioides sp. JS614]
Length = 500
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 59/122 (48%), Gaps = 30/122 (24%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
+ P T+++ ++ E RI+GFPV+D D +L+G++++ DL F V
Sbjct: 103 IGPDATLEQLDQLAGEYRISGFPVVDADNRLLGIITNRDL---------------RFTPV 147
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVR-ETTNLEDAARLLLETKYRRLPVVDA 216
+ W T V ++MTP P++ + EDA LL + K RLP+VDA
Sbjct: 148 -AEWATTK-------------VDEVMTPMPLITAPPDISREDATLLLRQHKRERLPLVDA 193
Query: 217 DG 218
G
Sbjct: 194 QG 195
>gi|392410314|ref|YP_006446921.1| CBS domain-containing protein [Desulfomonile tiedjei DSM 6799]
gi|390623450|gb|AFM24657.1| CBS domain-containing protein [Desulfomonile tiedjei DSM 6799]
Length = 245
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 60/118 (50%), Gaps = 18/118 (15%)
Query: 101 TTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDST 160
T T+ A+ + EK I+ PV++ KLVG+V+D DL +S S D+T
Sbjct: 17 TDTLQHAINLSSEKNISIMPVLES-GKLVGIVTDRDL---KRVSPS-----------DAT 61
Query: 161 WKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADG 218
E++ LS+ VG +MTP P++V +E+ A +LL K +PVVD G
Sbjct: 62 RLNVEEIKYRLSRVE---VGTIMTPHPIIVPPDYTIEETAEILLTNKISGVPVVDDKG 116
Score = 41.2 bits (95), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
Query: 97 VVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL-ALDSISG 145
+V P T++E EIL+ +I+G PV+DD ++G+++ DL A+ S++G
Sbjct: 87 IVPPDYTIEETAEILLTNKISGVPVVDDKGTILGVITKNDLFKAMMSLTG 136
>gi|148252269|ref|YP_001236854.1| hypothetical protein BBta_0680 [Bradyrhizobium sp. BTAi1]
gi|146404442|gb|ABQ32948.1| hypothetical protein BBta_0680 [Bradyrhizobium sp. BTAi1]
Length = 249
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 58/133 (43%), Gaps = 31/133 (23%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA-------------LDSIS 144
V P T V EA I++ I G PV+D +LVG+V+D D L LD +
Sbjct: 14 VTPGTPVAEAARIMLRNHIGGLPVVDAAGRLVGMVTDGDFLRRAELGTERKQGRWLDLLV 73
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
G GR + ++G+ VGD+M+ V V +L + A ++
Sbjct: 74 GRGR------------------IGADFVHSHGRTVGDIMSRPAVTVSPDASLAEIAAIME 115
Query: 205 ETKYRRLPVVDAD 217
+ +RLPVV +
Sbjct: 116 KRSIKRLPVVSGE 128
>gi|260062737|ref|YP_003195817.1| CBS domain-containing protein [Robiginitalea biformata HTCC2501]
gi|88784305|gb|EAR15475.1| CBS domain protein [Robiginitalea biformata HTCC2501]
Length = 153
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 63/131 (48%), Gaps = 25/131 (19%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D+MT L P V+E +++L+ +I+G PV+++D +LVG++S+ D + S
Sbjct: 22 VRDYMT--RNLITFHPDQHVEEVIDLLIRHKISGGPVVNEDRELVGILSEGDCIKHIS-- 77
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
DS + Q +S MV D+ T + N+ DAA+ L
Sbjct: 78 -------------DSRYYNMPPEQNRVSNC---MVRDVET-----IDGNLNIFDAAKKFL 116
Query: 205 ETKYRRLPVVD 215
E K RR P+V+
Sbjct: 117 EAKRRRFPIVE 127
>gi|335029500|ref|ZP_08523007.1| CBS domain protein [Streptococcus infantis SK1076]
gi|334268797|gb|EGL87229.1| CBS domain protein [Streptococcus infantis SK1076]
Length = 218
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/133 (36%), Positives = 70/133 (52%), Gaps = 20/133 (15%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT K + + P TTV A +++ E+ + PVI++D KLVGLV++ +
Sbjct: 3 VKDFMTRK--VVYISPDTTVAHAADLMREQGLHRLPVIEND-KLVGLVTEGTI------- 52
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
A+ S P ++ F E+ LL+KT V D+M V V +LEDA L+L
Sbjct: 53 ----AEAS--PSKATSLSIF-EMNYLLNKTK---VKDVMIRDVVTVSGYASLEDATYLML 102
Query: 205 ETKYRRLPVVDAD 217
+ K LPVVD D
Sbjct: 103 KNKIGILPVVDND 115
>gi|316932763|ref|YP_004107745.1| putative signal transduction protein [Rhodopseudomonas palustris
DX-1]
gi|315600477|gb|ADU43012.1| putative signal transduction protein with CBS domains
[Rhodopseudomonas palustris DX-1]
Length = 338
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 64/131 (48%), Gaps = 4/131 (3%)
Query: 86 GDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISG 145
D MTT + V+P T V E L+ I+ PV+D +G+VS+ DL+ D +
Sbjct: 4 ADVMTTA--IVTVQPDTPVHAIAETLLRHGISAVPVVDGHGAPLGIVSEGDLMPRDDTAR 61
Query: 146 SGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLE 205
R D + ++ S + + K++ + D+M V V ET L D A +L+E
Sbjct: 62 EARHD--WWLQILSEGEAVHPDYLRFLKSDTRTARDVMVGPVVTVEETAALADVADVLVE 119
Query: 206 TKYRRLPVVDA 216
+ +R+PV+ A
Sbjct: 120 KRIKRVPVLRA 130
>gi|452853043|ref|YP_007494727.1| CBS domain containing membrane protein [Desulfovibrio piezophilus]
gi|451896697|emb|CCH49576.1| CBS domain containing membrane protein [Desulfovibrio piezophilus]
Length = 224
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 72/134 (53%), Gaps = 19/134 (14%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V ++MT E+ + P ++ +A +++ +K I+ PV+D++ K+VG+VSD D+
Sbjct: 3 VKNWMTA--EVVTITPDRSMMKASKLMKDKIISCVPVVDENGKIVGIVSDRDI------- 53
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
D S P +T +E+ LLS+ K D+MT +RE +E AA L+L
Sbjct: 54 ----KDAS--PS-KATTLDMHELYYLLSEIKIK---DIMTKKVTTIREDETVEKAAVLML 103
Query: 205 ETKYRRLPVVDADG 218
E ++ LPVVD +
Sbjct: 104 EGRFGSLPVVDENN 117
>gi|302549200|ref|ZP_07301542.1| CBS domain-containing protein [Streptomyces viridochromogenes DSM
40736]
gi|302466818|gb|EFL29911.1| CBS domain-containing protein [Streptomyces viridochromogenes DSM
40736]
Length = 234
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 58/114 (50%), Gaps = 4/114 (3%)
Query: 102 TTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTW 161
T E +L E RI+G PV+DDD K++G++S+ DL+A + + +F T
Sbjct: 12 TPFKEVARLLAEHRISGLPVVDDDEKVLGVISETDLMARQAEAPGPSGPRRLFRRPRWTP 71
Query: 162 KTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVD 215
+ + ++T G+ LM+ + V + +AAR++ + RLPVVD
Sbjct: 72 GSRARQARAHARTAGQ----LMSRPAITVHGDASAVEAARVMAHHRVERLPVVD 121
>gi|223932398|ref|ZP_03624400.1| putative signal transduction protein with CBS domains
[Streptococcus suis 89/1591]
gi|302023619|ref|ZP_07248830.1| hypothetical protein Ssui0_03021 [Streptococcus suis 05HAS68]
gi|330832631|ref|YP_004401456.1| putative signal transduction protein with CBS domains
[Streptococcus suis ST3]
gi|386583892|ref|YP_006080295.1| putative signal transduction protein [Streptococcus suis D9]
gi|389856795|ref|YP_006359038.1| putative signal transduction protein [Streptococcus suis ST1]
gi|417092660|ref|ZP_11957276.1| putative signal transduction protein with CBS domain [Streptococcus
suis R61]
gi|223898852|gb|EEF65211.1| putative signal transduction protein with CBS domains
[Streptococcus suis 89/1591]
gi|329306854|gb|AEB81270.1| putative signal transduction protein with CBS domains
[Streptococcus suis ST3]
gi|353532339|gb|EHC02011.1| putative signal transduction protein with CBS domain [Streptococcus
suis R61]
gi|353736038|gb|AER17047.1| putative signal transduction protein with CBS domains
[Streptococcus suis D9]
gi|353740513|gb|AER21520.1| putative signal transduction protein with CBS domains
[Streptococcus suis ST1]
Length = 218
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 70/132 (53%), Gaps = 20/132 (15%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
+V DFMT K + + P TT+ A +I+ E+ + PVI++D KLVGLV++ +I
Sbjct: 2 SVKDFMTRK--VVYISPDTTIAHAADIMREQDLHRLPVIEND-KLVGLVTE------GTI 52
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
+ + + +T + E+ LL+KT V D+M + V +LEDAA L+
Sbjct: 53 AEASPSK--------ATSLSIYEMNYLLNKTK---VKDVMIKNVITVSGYASLEDAAYLM 101
Query: 204 LETKYRRLPVVD 215
+ K LPVVD
Sbjct: 102 YKNKVGILPVVD 113
>gi|315638129|ref|ZP_07893312.1| inosine-5'-monophosphate dehydrogenase [Campylobacter upsaliensis
JV21]
gi|315481809|gb|EFU72430.1| inosine-5'-monophosphate dehydrogenase [Campylobacter upsaliensis
JV21]
Length = 484
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 59/121 (48%), Gaps = 33/121 (27%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
+ P ++ EALE++ E RI+G PV+D++ KL+G++++ DL
Sbjct: 99 IAPNASIYEALELMAEYRISGVPVVDEERKLLGILTNRDL-------------------- 138
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVR-ETTNLEDAARLLLETKYRRLPVVDA 216
+ S N + V ++MT AP++ + L+DA ++ K +LP+VD
Sbjct: 139 -----------RFESNFNNR-VENVMTKAPLITAPKGCTLDDAEKIFSTNKVEKLPIVDE 186
Query: 217 D 217
+
Sbjct: 187 N 187
>gi|409399632|ref|ZP_11249902.1| hypothetical protein MXAZACID_02830 [Acidocella sp. MX-AZ02]
gi|409131251|gb|EKN00963.1| hypothetical protein MXAZACID_02830 [Acidocella sp. MX-AZ02]
Length = 235
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 62/121 (51%), Gaps = 6/121 (4%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V+P T+V +A I++ ++G PV+D+ LVG+V++ DLL I G + +
Sbjct: 14 VQPRTSVADAARIMLANHVSGLPVLDEAGVLVGVVTEGDLLRRAEIGTEGSPAGWLKALL 73
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
+ V T+ + V +MT +P+ +L + A+++L +RLPV++ D
Sbjct: 74 QPASVAADYV-----ATHSRHVSGVMTHSPIFATPEMSLGEVAQIMLRKHIKRLPVLE-D 127
Query: 218 G 218
G
Sbjct: 128 G 128
>gi|386086054|ref|YP_006001928.1| acetoin utilization protein [Streptococcus thermophilus ND03]
gi|387909158|ref|YP_006339464.1| etoin utilization protein [Streptococcus thermophilus MN-ZLW-002]
gi|312277767|gb|ADQ62424.1| acetoin utilization protein [Streptococcus thermophilus ND03]
gi|387574093|gb|AFJ82799.1| acetoin utilization protein [Streptococcus thermophilus MN-ZLW-002]
Length = 139
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 63/120 (52%), Gaps = 18/120 (15%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P TTV A++I+ +K + PVI+ D KLVGL+++ + S S S++
Sbjct: 8 VSPETTVATAVDIIRDKGLRRLPVIEHD-KLVGLITEG---TMAEASPSKATSLSIY--- 60
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
E+ LL+KT VGD+M + V + +LEDA ++L+ K LPVVD D
Sbjct: 61 --------EMNYLLNKTK---VGDIMIKNVLTVSKYASLEDAIYIMLQNKVGVLPVVDND 109
>gi|115252811|emb|CAK98247.1| inosine-5'-monophosphate dehydrogenase transmembrane protein
[Spiroplasma citri]
Length = 481
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 59/118 (50%), Gaps = 31/118 (26%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
+KPT TV +A I+ + RI+G P++D++ KL+G++++ D+ A ++ S
Sbjct: 98 LKPTMTVQDAENIMAQYRISGLPIVDEENKLLGIITNRDIRACHDLTAS----------- 146
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVD 215
V K ++ V +L+T E +LE A +LL + +LP+V+
Sbjct: 147 ---------VDKFMT------VKNLIT-----THENIDLEKAKDILLNNRIEKLPIVN 184
>gi|448330645|ref|ZP_21519924.1| peptidase M50 [Natrinema versiforme JCM 10478]
gi|445611149|gb|ELY64909.1| peptidase M50 [Natrinema versiforme JCM 10478]
Length = 409
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 37/57 (64%), Gaps = 4/57 (7%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVID----DDWKLVGLVSDYD 136
TVGD MT +LH V+P TTV ++ + +R TG+PVID +D +LVGLV+ D
Sbjct: 250 TVGDIMTPANDLHTVEPETTVSTLIQRMFRERHTGYPVIDPNTFEDERLVGLVTLSD 306
>gi|303245552|ref|ZP_07331835.1| putative signal transduction protein with CBS domains
[Desulfovibrio fructosovorans JJ]
gi|302492815|gb|EFL52680.1| putative signal transduction protein with CBS domains
[Desulfovibrio fructosovorans JJ]
Length = 220
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 59/120 (49%), Gaps = 17/120 (14%)
Query: 99 KPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVD 158
KP T++ +A +++ E PV+DD+ +LVG+VSD D+ A S +D
Sbjct: 15 KPATSIMKAAKMMKENGYHRLPVVDDNGRLVGIVSDRDI---------KEASPSKATTLD 65
Query: 159 STWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADG 218
+E+ LLS+ +GD+MT V V +E AA LLL LPVVD D
Sbjct: 66 -----MHELYYLLSEIK---IGDIMTKTVVAVTPDDTVEKAAVLLLRHNVGGLPVVDDDN 117
Score = 44.3 bits (103), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 40/62 (64%), Gaps = 3/62 (4%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL-ALDSI 143
+GD MT + + V P TV++A +L+ + G PV+DDD K+VG+++D D+ L SI
Sbjct: 78 IGDIMT--KTVVAVTPDDTVEKAAVLLLRHNVGGLPVVDDDNKVVGVITDSDIFKVLVSI 135
Query: 144 SG 145
+G
Sbjct: 136 TG 137
Score = 38.5 bits (88), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 27/41 (65%)
Query: 178 MVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADG 218
++ D M+ +PV + T++ AA+++ E Y RLPVVD +G
Sbjct: 2 LIKDWMSKSPVTAKPATSIMKAAKMMKENGYHRLPVVDDNG 42
>gi|297560079|ref|YP_003679053.1| hypothetical protein Ndas_1105 [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
gi|296844527|gb|ADH66547.1| CBS domain containing membrane protein [Nocardiopsis dassonvillei
subsp. dassonvillei DSM 43111]
Length = 228
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 65/138 (47%), Gaps = 8/138 (5%)
Query: 82 VYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALD 141
++TV D MTT E+ V T E E+LV ++ PV + + +VG+VSD DLL +
Sbjct: 1 MHTVSDVMTT--EVFSVTGDTGYREIAEMLVTHGVSALPVTNGEGCVVGVVSDEDLLHKE 58
Query: 142 SISGSGRADNSMFPEVDSTWKT-FNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAA 200
+G A P + + + K + +LMT V V ++ AA
Sbjct: 59 EFTGGDYA-----PPLRARLRARLGSGGSAGDKATARNAAELMTGPAVTVSSDASVVLAA 113
Query: 201 RLLLETKYRRLPVVDADG 218
RL+ ++LPVVD DG
Sbjct: 114 RLMERHGVKQLPVVDGDG 131
>gi|57242158|ref|ZP_00370098.1| inosine-5'-monophosphate dehydrogenase [Campylobacter upsaliensis
RM3195]
gi|57017350|gb|EAL54131.1| inosine-5'-monophosphate dehydrogenase [Campylobacter upsaliensis
RM3195]
Length = 484
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 58/119 (48%), Gaps = 33/119 (27%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
+ P ++ EALE++ E RI+G PV+D++ KL+G++++ DL
Sbjct: 99 IAPNASIYEALELMAEYRISGVPVVDEERKLLGILTNRDL-------------------- 138
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVR-ETTNLEDAARLLLETKYRRLPVVD 215
+ S N + V ++MT AP++ + L+DA ++ K +LP+VD
Sbjct: 139 -----------RFESNFNNR-VENVMTKAPLITAPKGCTLDDAEKIFSTNKVEKLPIVD 185
>gi|239621972|ref|ZP_04665003.1| conserved hypothetical protein [Bifidobacterium longum subsp.
infantis CCUG 52486]
gi|239515163|gb|EEQ55030.1| conserved hypothetical protein [Bifidobacterium longum subsp.
infantis CCUG 52486]
Length = 683
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 57/110 (51%), Gaps = 6/110 (5%)
Query: 111 LVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNE--VQ 168
+ ++G PV++ D +LVG VSD D++ S + ++ ST F++ V
Sbjct: 553 FIRLNVSGLPVVNGDGRLVGFVSDGDVMK----SIATYESRTVSTGTGSTMVVFDDETVA 608
Query: 169 KLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADG 218
+ +GK V D+ T V ++ + AR+L + ++++LPVVD DG
Sbjct: 609 SKVQALSGKKVMDIATRKVVAATPDQHVGEVARILAKKQFKKLPVVDGDG 658
>gi|383762105|ref|YP_005441087.1| hypothetical protein CLDAP_11500 [Caldilinea aerophila DSM 14535 =
NBRC 104270]
gi|381382373|dbj|BAL99189.1| hypothetical protein CLDAP_11500 [Caldilinea aerophila DSM 14535 =
NBRC 104270]
Length = 286
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 58/118 (49%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V+ T + E +L I+G PV+D+ KLVG+V+D+DL+ ++ R + +
Sbjct: 14 VRTDTRIPEVARLLRAHDISGMPVLDETGKLVGVVTDHDLILRNAPIREPRYFAVLSGYI 73
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVD 215
+ + ++ L T GD++ P V T LE+A L+L + LPV+D
Sbjct: 74 PLNLEEYRHYREQLRHTMAVTAGDMVEPDIPTVTPDTPLEEAMELMLNPQVTILPVLD 131
>gi|336172298|ref|YP_004579436.1| hypothetical protein [Lacinutrix sp. 5H-3-7-4]
gi|334726870|gb|AEH01008.1| CBS domain containing membrane protein [Lacinutrix sp. 5H-3-7-4]
Length = 157
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 70/136 (51%), Gaps = 26/136 (19%)
Query: 83 YTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS 142
+ V DFM+ EL K T +V+E + L++ +I+G PV+++ +L+G++S+ D +
Sbjct: 24 FKVSDFMS--RELITFKATQSVEEVVSALIKHKISGGPVVNERNELIGIISEGD--CIKQ 79
Query: 143 ISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARL 202
IS S + M E DS K MV ++ T + N+ DAA+
Sbjct: 80 ISDSRYYNMPM--ENDSIEK--------------HMVTNVET-----IDGNLNVFDAAKQ 118
Query: 203 LLETKYRRLPVVDADG 218
L++K RR P+V+ DG
Sbjct: 119 FLDSKRRRFPIVE-DG 133
>gi|390941712|ref|YP_006405473.1| hypothetical protein Belba_0046 [Belliella baltica DSM 15883]
gi|390415140|gb|AFL82718.1| CBS domain-containing protein [Belliella baltica DSM 15883]
Length = 152
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 64/143 (44%), Gaps = 29/143 (20%)
Query: 72 TANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGL 131
+ +AAP V D M+T L P T+D LE+L +++I+G V+D LVG+
Sbjct: 13 SKKAAAP----ILVQDHMST--NLVTFYPEDTIDHVLELLTKRKISGAAVVDQSGHLVGI 66
Query: 132 VSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVR 191
+S+ D L I ++ FP V + MT + ++
Sbjct: 67 ISEVD--CLKEIIKGKYSNTPKFPGT---------------------VAEHMTKDVITLK 103
Query: 192 ETTNLEDAARLLLETKYRRLPVV 214
+L DAA+L L+ K RR PV+
Sbjct: 104 PDLSLFDAAQLFLDKKIRRFPVM 126
>gi|297617214|ref|YP_003702373.1| signal transduction protein with CBS domains [Syntrophothermus
lipocalidus DSM 12680]
gi|297145051|gb|ADI01808.1| putative signal transduction protein with CBS domains
[Syntrophothermus lipocalidus DSM 12680]
Length = 153
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 71/131 (54%), Gaps = 11/131 (8%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGS 146
D MT +++ VV +V + +E+ IT V+D+D K+ G+V+D D+LA +
Sbjct: 6 DIMT--QDVKVVNTDDSVGGVIRCFLEEGITSAVVVDNDNKVKGIVTDGDILA------A 57
Query: 147 GRADNSMFPEVDSTWKTFNEVQKLLSKTNG---KMVGDLMTPAPVVVRETTNLEDAARLL 203
R + +V S + + + ++KT+ K V ++MT V V E T++ + ARL+
Sbjct: 58 VRQRRPVVVDVMSYFWAVGDDEDFVAKTDAVKQKKVKEIMTKHVVTVTEDTSIPEIARLM 117
Query: 204 LETKYRRLPVV 214
+E +++PVV
Sbjct: 118 VENGIKQIPVV 128
>gi|386343997|ref|YP_006040161.1| putative uncharacterized protein yhcV [Streptococcus thermophilus
JIM 8232]
gi|339277458|emb|CCC19206.1| putative uncharacterized protein yhcV [Streptococcus thermophilus
JIM 8232]
Length = 139
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 62/120 (51%), Gaps = 18/120 (15%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P TTV A +I+ +K + PVI+ D KLVGL+++ + + P
Sbjct: 8 VSPETTVATAADIIRDKGLRRLPVIEHD-KLVGLITEGTM--------------AEAPPS 52
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
+T + E+ LL+KT VGD+M + V + +LEDA ++L+ K LPVVD D
Sbjct: 53 KATSLSIYEMNYLLNKTK---VGDIMIKNVLTVSKYASLEDAICIMLQNKVGVLPVVDND 109
>gi|325958054|ref|YP_004289520.1| putative signal transduction protein with CBS domains
[Methanobacterium sp. AL-21]
gi|325329486|gb|ADZ08548.1| putative signal transduction protein with CBS domains
[Methanobacterium sp. AL-21]
Length = 316
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 68/142 (47%), Gaps = 31/142 (21%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
+V + MT ++ V+ ++D A++I+ +K I PV+D D K+VG+VS+ D + L +
Sbjct: 110 SVKEIMT--RDVEVITHKDSIDHAIDIMRKKEIGALPVVDADHKMVGIVSERDFVIL--L 165
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
SG +L+ ++V D MT + T +E A++++
Sbjct: 166 SG------------------------VLTD---EVVEDYMTKNVIATTPGTRIEGASKIM 198
Query: 204 LETKYRRLPVVDADGWNYHKRK 225
+ K RR+PVV + H K
Sbjct: 199 VRNKLRRIPVVGEERKTSHPEK 220
>gi|300853495|ref|YP_003778479.1| hypothetical protein CLJU_c02930 [Clostridium ljungdahlii DSM
13528]
gi|300433610|gb|ADK13377.1| conserved hypothetical protein containing CBS domain [Clostridium
ljungdahlii DSM 13528]
Length = 142
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 56/113 (49%), Gaps = 27/113 (23%)
Query: 103 TVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWK 162
TV++A +I+ + I PV + K++G+V+D D+ A+ S S SG
Sbjct: 19 TVEKAAQIMQQNNIGAVPVCKN-GKVIGIVTDRDI-AIRSASQSG--------------- 61
Query: 163 TFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVD 215
T K V D+M+ PV NLEDA+R++ + + RRLP+V+
Sbjct: 62 ----------GTESKFVRDIMSANPVTGSPDMNLEDASRIMSDKQIRRLPIVE 104
>gi|91774375|ref|YP_544131.1| CBS domain-containing protein [Methylobacillus flagellatus KT]
gi|91708362|gb|ABE48290.1| CBS domain containing membrane protein [Methylobacillus flagellatus
KT]
Length = 410
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 64/137 (46%), Gaps = 10/137 (7%)
Query: 81 GVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLAL 140
G T GD M+ ++ V+ T ++EA +L+ I PVID +++G+++ +D +
Sbjct: 246 GEITCGDIMS--RDVVSVEYGTLLEEAWPLLLNHHIKALPVIDRAHRVIGIITRFDFMK- 302
Query: 141 DSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAA 200
A+ +P + + F L+ ++VG +MT + V E T++
Sbjct: 303 -------HANLEAYPGFEEKLRKFIRRTFLVETDKPEVVGQIMTSKVLTVSEDTHIVQLV 355
Query: 201 RLLLETKYRRLPVVDAD 217
LL E +PV+D +
Sbjct: 356 PLLSERGIHHVPVLDHE 372
>gi|347523979|ref|YP_004781549.1| putative signal transduction protein with CBS domains [Pyrolobus
fumarii 1A]
gi|343460861|gb|AEM39297.1| putative signal transduction protein with CBS domains [Pyrolobus
fumarii 1A]
Length = 294
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 59/126 (46%), Gaps = 29/126 (23%)
Query: 93 EELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNS 152
++L +KP ++ EA +IL EK I G PVIDD+ +L+G+++ D + GR D
Sbjct: 178 KQLITLKPNMSIREAAKILSEKMIRGAPVIDDEGRLIGIITLAD---IAKAVAEGRLDAK 234
Query: 153 MFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLP 212
V + M+ V VRE ++ DA RL+ + + RL
Sbjct: 235 --------------------------VEEYMSKEVVTVREDQDILDAIRLMQKYRIGRLV 268
Query: 213 VVDADG 218
V+DA G
Sbjct: 269 VLDAMG 274
>gi|340755369|ref|ZP_08692059.1| inosine-5'-monophosphate dehydrogenase [Fusobacterium sp. D12]
gi|419840882|ref|ZP_14364268.1| inosine-5'-monophosphate dehydrogenase [Fusobacterium necrophorum
subsp. funduliforme ATCC 51357]
gi|421500306|ref|ZP_15947317.1| IMP dehydrogenase [Fusobacterium necrophorum subsp. funduliforme
Fnf 1007]
gi|340573502|gb|EFS24031.2| inosine-5'-monophosphate dehydrogenase [Fusobacterium sp. D12]
gi|386906970|gb|EIJ71690.1| inosine-5'-monophosphate dehydrogenase [Fusobacterium necrophorum
subsp. funduliforme ATCC 51357]
gi|402268720|gb|EJU18086.1| IMP dehydrogenase [Fusobacterium necrophorum subsp. funduliforme
Fnf 1007]
Length = 486
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 89/225 (39%), Gaps = 63/225 (28%)
Query: 3 SIVLPHSISV-ARLRAPPAGRTSGRTSFALQLPCLLLSRPGCRVFSVLATSSDRVSALRR 61
S VLPH +S+ ARL L +P L + T SD AL R
Sbjct: 22 SEVLPHEVSLKARLT----------KKITLNVPILSAAMD-------TVTESDLAIALAR 64
Query: 62 SSAV-FASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTT-----TVDEALEILVEKR 115
+ F ++ A D + E + P T TV +A EI+ +
Sbjct: 65 QGGIGFIHKNMSIEEQAAEV------DRVKRSESGMITNPITLNQESTVMQAEEIMRRYK 118
Query: 116 ITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTN 175
I+G PVI++D KL+G++++ D+ K N+
Sbjct: 119 ISGLPVIEEDGKLIGIITNRDI---------------------KYRKDMNQ--------- 148
Query: 176 GKMVGDLMTPAPVVVRET-TNLEDAARLLLETKYRRLPVVDADGW 219
+VGD+MT ++ T L++A +LL + +LP+ D +G+
Sbjct: 149 --LVGDIMTKEKLITAPVGTTLDEAKEVLLANRIEKLPITDEEGY 191
Score = 42.0 bits (97), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL 137
VGD MT KE+L TT+DEA E+L+ RI P+ D++ L GL++ D+
Sbjct: 150 VGDIMT-KEKLITAPVGTTLDEAKEVLLANRIEKLPITDEEGYLKGLITIKDI 201
>gi|421589648|ref|ZP_16034763.1| hypothetical protein RCCGEPOP_12430 [Rhizobium sp. Pop5]
gi|403705361|gb|EJZ20969.1| hypothetical protein RCCGEPOP_12430 [Rhizobium sp. Pop5]
Length = 229
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 63/133 (47%), Gaps = 14/133 (10%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D M T + + P V A ++ ++ ++G PV+DD +L+G++S+ DL+ +S
Sbjct: 3 VKDVMATT--VVTLSPDNGVRHAARLMSDQHVSGIPVVDDGGRLLGVISEGDLIRRTELS 60
Query: 145 GSG---RADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAAR 201
+AD + P +E K VGD+MT PV + E L A
Sbjct: 61 SGAFVLKADMGLGP---------DERANAFVKRCAWRVGDVMTSDPVTIDEDAPLSRVAG 111
Query: 202 LLLETKYRRLPVV 214
L+ + +R+PV+
Sbjct: 112 LMQDRGIKRIPVL 124
>gi|448347113|ref|ZP_21535992.1| peptidase M50 [Natrinema altunense JCM 12890]
gi|445631450|gb|ELY84682.1| peptidase M50 [Natrinema altunense JCM 12890]
Length = 404
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 40/63 (63%), Gaps = 3/63 (4%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVID---DDWKLVGLVSDYDLLAL 140
TVGD MT E+LH V+P TTV E +E + +R TG+PV++ +LVGLV+ D +
Sbjct: 249 TVGDIMTPVEDLHTVEPDTTVAELIERMFRERHTGYPVVERSATGERLVGLVTLSDAREV 308
Query: 141 DSI 143
D +
Sbjct: 309 DQV 311
>gi|48478187|ref|YP_023893.1| hypothetical protein PTO1115 [Picrophilus torridus DSM 9790]
gi|48430835|gb|AAT43700.1| CBS domain containing protein [Picrophilus torridus DSM 9790]
Length = 281
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 56/111 (50%), Gaps = 15/111 (13%)
Query: 119 FPVIDDDWKLVGLVSDYDLL------ALDSISGSGRADNSMFPEVDSTWKTF-NEVQKLL 171
FPV+D D GLV+D D+ +++ +S +G AD+ E TW N ++
Sbjct: 158 FPVLDRDGNFTGLVTDRDIFDKVKMSSVEMLSQAGIADD----EDPWTWDGIRNVFTYII 213
Query: 172 SKTNGKMVG----DLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADG 218
K+N K+ ++M PVV L DA +L+++ Y +LPV+D G
Sbjct: 214 EKSNVKIPNIPAREIMVKNPVVTYINARLGDAVKLMMQKNYNQLPVLDGHG 264
>gi|39934295|ref|NP_946571.1| hypothetical protein RPA1220 [Rhodopseudomonas palustris CGA009]
gi|192289823|ref|YP_001990428.1| signal-transduction protein with CBS domains [Rhodopseudomonas
palustris TIE-1]
gi|39648143|emb|CAE26663.1| CBS domain [Rhodopseudomonas palustris CGA009]
gi|192283572|gb|ACE99952.1| putative signal-transduction protein with CBS domains
[Rhodopseudomonas palustris TIE-1]
Length = 338
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 66/137 (48%), Gaps = 16/137 (11%)
Query: 86 GDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISG 145
D MTT + V+P T V E L++ I+ PV+D +G+VS+ DL+
Sbjct: 4 ADVMTTA--IVTVQPETPVHAIAETLLKHGISAVPVVDGAGVPLGIVSEGDLMP------ 55
Query: 146 SGRADNSMFPEVDSTWKTFNEVQKL------LSKTNGKMVGDLMTPAPVVVRETTNLEDA 199
RAD+ D + +E + + K++ + D+M V V ETT L D
Sbjct: 56 --RADSDREARHDWWLQMLSEGEAVHPDYVRFLKSDTRTAKDVMVGPVVTVEETTALADI 113
Query: 200 ARLLLETKYRRLPVVDA 216
A LL+E + +R+PVV A
Sbjct: 114 ADLLVEKRIKRVPVVRA 130
>gi|27379751|ref|NP_771280.1| hypothetical protein bll4640 [Bradyrhizobium japonicum USDA 110]
gi|27352904|dbj|BAC49905.1| bll4640 [Bradyrhizobium japonicum USDA 110]
Length = 252
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 57/120 (47%), Gaps = 5/120 (4%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
++P + +A+++++ I+G PV+D LVG++ + D L I G+ N + +
Sbjct: 14 IRPEAPITDAIKVMLAHHISGLPVVDSADNLVGIICESDFLRRSEI-GTEHERNRLLSLL 72
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
+ +E K G+ V +MT PV E L++ A ++ +PV+ AD
Sbjct: 73 LGAERVASE----FVKERGRKVEQVMTRQPVTTNEQAPLDEVADVMERRHLNHIPVMRAD 128
>gi|336122097|ref|YP_004576872.1| signal transduction protein with CBS domains [Methanothermococcus
okinawensis IH1]
gi|334856618|gb|AEH07094.1| putative signal transduction protein with CBS domains
[Methanothermococcus okinawensis IH1]
Length = 154
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 66/124 (53%), Gaps = 7/124 (5%)
Query: 97 VVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRAD---NSM 153
VV V E +++ + +I+G PVIDDD LVG++S+ D++ + + R D S
Sbjct: 13 VVNQNNDVREVIKLFRKYKISGAPVIDDDRNLVGIISESDIIKTLT-THDDRFDIILPSP 71
Query: 154 FPEVDSTWKT---FNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRR 210
F ++ KT E ++ + K V D+MT + V T + +AA ++++ K +R
Sbjct: 72 FDLIELPLKTTLKIEEFREDIEKALKTKVKDVMTKDVITVSPDTPINEAAEIMIKHKIKR 131
Query: 211 LPVV 214
LPV+
Sbjct: 132 LPVI 135
>gi|398780622|ref|ZP_10544951.1| hypothetical protein SU9_01020 [Streptomyces auratus AGR0001]
gi|396998087|gb|EJJ09021.1| hypothetical protein SU9_01020 [Streptomyces auratus AGR0001]
Length = 224
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 65/135 (48%), Gaps = 18/135 (13%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TVG MT + V+P T E ++ L E +T PV+D + +G+VS+ DLL
Sbjct: 5 TVGVLMTRG--VVQVRPQTPFKEIVKTLTENDVTAVPVVDATGRPMGVVSEADLLR---- 58
Query: 144 SGSGRADNSM---FPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAA 200
+G AD S P +++ W+ +K G +LM+ V R + +AA
Sbjct: 59 KSAGHADPSGRTPIPHLEA-WER--------AKAEGARAEELMSAPAVCARAEWTVVEAA 109
Query: 201 RLLLETKYRRLPVVD 215
RL+ +RLPVVD
Sbjct: 110 RLMEVQNVKRLPVVD 124
>gi|343083062|ref|YP_004772357.1| hypothetical protein [Cyclobacterium marinum DSM 745]
gi|342351596|gb|AEL24126.1| CBS domain containing protein [Cyclobacterium marinum DSM 745]
Length = 152
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 58/130 (44%), Gaps = 25/130 (19%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMTT L T+D + +L KRI+G PV+DD+ +LVG++S+ D L + I
Sbjct: 22 VKDFMTT--NLITFSAEDTIDHVITVLTRKRISGAPVVDDNGRLVGMISEGDCLK-EIIK 78
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
G + K + M ++ T P + ++ DAA L
Sbjct: 79 GQ-----------------YTNTPKFPASVAEHMTTEVFTLPPEI-----SIFDAADRFL 116
Query: 205 ETKYRRLPVV 214
K RR PVV
Sbjct: 117 TLKIRRFPVV 126
>gi|156741506|ref|YP_001431635.1| signal transduction protein [Roseiflexus castenholzii DSM 13941]
gi|156232834|gb|ABU57617.1| putative signal transduction protein with CBS domains [Roseiflexus
castenholzii DSM 13941]
Length = 212
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 62/117 (52%), Gaps = 18/117 (15%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P TTV +AL + EKRI PVID +LVG+V++ DLL S S+
Sbjct: 14 VAPKTTVSDALMLFREKRIRRAPVIDHH-RLVGIVAERDLL-----FASPSPITSL---- 63
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVV 214
S W E+ LLSK V ++MT + V E T +E+AAR++ + + LPV+
Sbjct: 64 -SVW----ELNYLLSKLT---VDEVMTHEVITVAEDTPIEEAARIMADKRVGGLPVM 112
>gi|390939688|ref|YP_006403425.1| inosine-5''-monophosphate dehydrogenase [Sulfurospirillum barnesii
SES-3]
gi|390192795|gb|AFL67850.1| inosine-5''-monophosphate dehydrogenase [Sulfurospirillum barnesii
SES-3]
Length = 482
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 58/121 (47%), Gaps = 33/121 (27%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
+K + T+ +AL I+ E RI+G PVIDD L+G++++ DL R +N V
Sbjct: 99 IKASATLRDALAIMSEYRISGVPVIDDTDTLIGILTNRDL----------RFENDYSKNV 148
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVV-VRETTNLEDAARLLLETKYRRLPVVDA 216
+ +LMT P++ V++ T L+DA + K +LPVVD
Sbjct: 149 E----------------------ELMTKMPLITVKKGTTLDDAEAIFRTNKVEKLPVVDE 186
Query: 217 D 217
+
Sbjct: 187 N 187
>gi|451981592|ref|ZP_21929944.1| conserved hypothetical protein [Nitrospina gracilis 3/211]
gi|451761265|emb|CCQ91208.1| conserved hypothetical protein [Nitrospina gracilis 3/211]
Length = 217
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 70/134 (52%), Gaps = 24/134 (17%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
VG+ M+ K LH VK + ++ +A +++V I PV+D +L+G++++ D+ +
Sbjct: 3 VGEVMSKK--LHTVKKSDSLKKAQDLMVTHAIRHLPVVDK-GELLGIITESDIRG--AFI 57
Query: 145 GSGR---ADNSMFPEVDSTWKTFNEVQKLLSKTNGKM-VGDLMTPAPVVVRETTNLEDAA 200
G GR NS E+++ GKM V D MT P+VV T++EDAA
Sbjct: 58 GQGRNARKGNSGKLEINNP---------------GKMKVNDYMTRHPLVVVPETHIEDAA 102
Query: 201 RLLLETKYRRLPVV 214
++ + K LPV+
Sbjct: 103 LMIYKNKIGALPVI 116
>gi|373109163|ref|ZP_09523442.1| hypothetical protein HMPREF9712_01035 [Myroides odoratimimus CCUG
10230]
gi|423129169|ref|ZP_17116844.1| hypothetical protein HMPREF9714_00244 [Myroides odoratimimus CCUG
12901]
gi|423132828|ref|ZP_17120475.1| hypothetical protein HMPREF9715_00250 [Myroides odoratimimus CIP
101113]
gi|371645161|gb|EHO10687.1| hypothetical protein HMPREF9712_01035 [Myroides odoratimimus CCUG
10230]
gi|371649367|gb|EHO14847.1| hypothetical protein HMPREF9714_00244 [Myroides odoratimimus CCUG
12901]
gi|371649585|gb|EHO15062.1| hypothetical protein HMPREF9715_00250 [Myroides odoratimimus CIP
101113]
Length = 138
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 55/113 (48%), Gaps = 19/113 (16%)
Query: 106 EALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFN 165
E ++LVE I PVI+ + +VG++S D+L + G+ D S + +K
Sbjct: 26 EVNQLLVEYNIRHIPVIEAE-NVVGIISSNDILKIGY--GANDLDQSALDAIYDAYK--- 79
Query: 166 EVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADG 218
+ D+MT P+VV + TN++D A + + ++ LPVVD D
Sbjct: 80 -------------LEDVMTKNPIVVMDDTNIKDVAEIFSKQQFHSLPVVDKDN 119
>gi|307354738|ref|YP_003895789.1| putative signal transduction protein [Methanoplanus petrolearius
DSM 11571]
gi|307157971|gb|ADN37351.1| putative signal transduction protein with CBS domains
[Methanoplanus petrolearius DSM 11571]
Length = 162
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 68/127 (53%), Gaps = 10/127 (7%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPE- 156
V+ V EA IL ++RI G PV+D + +L G+V++ DLL+L + +D+ P
Sbjct: 14 VQADAKVSEAASILRKRRIGGIPVMDGE-RLAGIVTETDLLSL--LDVGELSDDLWLPSP 70
Query: 157 ---VDSTWKTF---NEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRR 210
++ + F + +K L+ + + D+M+ + + E +E+AA+L+L R
Sbjct: 71 LEIIEIPIREFVNWEKTRKALTDISESPISDIMSTDVIYIDENAEIEEAAKLMLSEGIAR 130
Query: 211 LPVVDAD 217
LPVV +D
Sbjct: 131 LPVVKSD 137
>gi|288929624|ref|ZP_06423468.1| inosine-5'-monophosphate dehydrogenase [Prevotella sp. oral taxon
317 str. F0108]
gi|288329129|gb|EFC67716.1| inosine-5'-monophosphate dehydrogenase [Prevotella sp. oral taxon
317 str. F0108]
Length = 494
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 73/162 (45%), Gaps = 48/162 (29%)
Query: 73 ANSAAPSSGVYTVGDFMTTKEELH---VVK---------PTT-----TVDEALEILVEKR 115
A + A G+ + M+ +E+ H VVK P T TV +AL+++ +
Sbjct: 63 AIAIAREGGIGVIHKNMSIEEQAHEVAVVKRAENGMIYDPVTIRRGRTVKDALDMMRDYH 122
Query: 116 ITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTN 175
I G PV+D+D LVG+V++ DL R ++ + ++D + N
Sbjct: 123 IGGIPVVDEDNCLVGIVTNRDL----------RFEHRLDKKIDEVMTSEN---------- 162
Query: 176 GKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
VV + T+L AA++L E K +LPVVDA+
Sbjct: 163 -----------LVVTHQQTDLAAAAQILQENKIEKLPVVDAN 193
>gi|295681015|ref|YP_003609589.1| signal transduction protein [Burkholderia sp. CCGE1002]
gi|295440910|gb|ADG20078.1| putative signal transduction protein with CBS domains [Burkholderia
sp. CCGE1002]
Length = 230
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 59/115 (51%), Gaps = 3/115 (2%)
Query: 100 PTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDS 159
P T+ +A ++ V+ I+G PV+ + +++G+VS DLL +G+G + E+ S
Sbjct: 16 PEMTIHDAAKLFVDHHISGMPVLGANGQVIGIVSQGDLLHRVE-NGTGHGKRRWWLELLS 74
Query: 160 TWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVV 214
+ + E K +G +VGD+M + + E L A L+ +R+PV+
Sbjct: 75 S--SAREQAARYVKEHGHVVGDVMCENVISIPEDMPLHQIADLMERRHLKRVPVL 127
>gi|86134872|ref|ZP_01053454.1| conserved hypothetical protein [Polaribacter sp. MED152]
gi|85821735|gb|EAQ42882.1| conserved hypothetical protein [Polaribacter sp. MED152]
Length = 155
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 67/141 (47%), Gaps = 24/141 (17%)
Query: 75 SAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSD 134
S + S V D+MTTK L K ++D + +L++ +I+G PV++D+ +L+G++S+
Sbjct: 13 SHSKSEEQILVSDYMTTK--LITFKAEDSLDHVIALLIKNKISGGPVVNDNNQLIGIISE 70
Query: 135 YDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETT 194
D + IS S K +N + S TN VG M + +
Sbjct: 71 TDCIK--HISES---------------KYYN----MPSDTNN-TVGKYMVTDVDTIDKDM 108
Query: 195 NLEDAARLLLETKYRRLPVVD 215
N+ DAA + + RR PV D
Sbjct: 109 NIFDAAFKFISSHRRRFPVCD 129
>gi|284163584|ref|YP_003401863.1| peptidase M50 [Haloterrigena turkmenica DSM 5511]
gi|284013239|gb|ADB59190.1| peptidase M50 [Haloterrigena turkmenica DSM 5511]
Length = 393
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 63/131 (48%), Gaps = 29/131 (22%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDW----KLVGLVSDYDLLA 139
TVGD MT +LH V+P TT+ E ++ + +R TG+PVID D +LVGLV+ D
Sbjct: 251 TVGDIMTPAGDLHTVEPETTIAELVQRMFTERHTGYPVIDTDAFEGERLVGLVTLTDARE 310
Query: 140 LDSISGSGRADNSMFPEVDST-WKTF---------------NEVQKLLSKTNGKMVG--- 180
+D + D EV ST KT N + +LL +G +VG
Sbjct: 311 VDPV----ERDAFTVDEVMSTDLKTITPDSDAMTAIEEMRENNIGRLLVVDDGDLVGLIS 366
Query: 181 --DLMTPAPVV 189
D+MT +V
Sbjct: 367 RSDVMTAFDIV 377
>gi|392412223|ref|YP_006448830.1| CBS domain-containing protein [Desulfomonile tiedjei DSM 6799]
gi|390625359|gb|AFM26566.1| CBS domain-containing protein [Desulfomonile tiedjei DSM 6799]
Length = 226
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 69/134 (51%), Gaps = 20/134 (14%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D+MT K + ++ T ++ A+ +++E ++ FPV+++ KLVG+V+D DL
Sbjct: 3 VKDWMTKK--VVTLEVTDSLQHAINLMMEDHVSMFPVLEEG-KLVGIVTDRDL------- 52
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
RA S +D +Q+++ + VG +M+ P+ V +E+AA +L+
Sbjct: 53 --KRASPSDMARLD--------IQQIIYHVSRVEVGAIMSRYPITVPLNWTVEEAAEILM 102
Query: 205 ETKYRRLPVVDADG 218
K PV+D G
Sbjct: 103 TNKISGCPVIDEKG 116
Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 32/44 (72%), Gaps = 1/44 (2%)
Query: 103 TVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL-ALDSISG 145
TV+EA EIL+ +I+G PVID+ ++ GL++ DL AL ++SG
Sbjct: 93 TVEEAAEILMTNKISGCPVIDEKGEIRGLITKSDLFKALIALSG 136
>gi|317970073|ref|ZP_07971463.1| CBS [Synechococcus sp. CB0205]
Length = 154
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 68/133 (51%), Gaps = 8/133 (6%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V + MTT + V T + A++++ + I+G PV+D LVG +++ DL+ + S
Sbjct: 7 VSEVMTTP--IRSVGRETPLQNAVQVMSDHHISGLPVVDAAGALVGELTEQDLMVRE--S 62
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQ--KLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARL 202
G M +D+ N +Q K + + G VG++M+ AP T L +AARL
Sbjct: 63 GFDAGPYVML--LDAVIYLRNPLQWDKQVHQVLGNSVGEVMSQAPHTCSGDTLLPEAARL 120
Query: 203 LLETKYRRLPVVD 215
L E +RL V+D
Sbjct: 121 LHEKGTQRLFVLD 133
>gi|395777163|ref|ZP_10457678.1| putative CBS domain-containing protein [Streptomyces acidiscabies
84-104]
Length = 221
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 65/138 (47%), Gaps = 17/138 (12%)
Query: 83 YTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS 142
+ V D MT + V + + + ++ E R++ PV + + ++VG+VS+ DLL +
Sbjct: 6 HVVSDVMT--HTVVSVGRDASFKDIVRLMREWRVSALPVTEGEDRVVGVVSEADLLCKEE 63
Query: 143 ISGSGRADNSMFPEVDSTWKTFNEVQKL--LSKTNGKMVGDLMTPAPVVVRETTNLEDAA 200
D + ++++L L K G DLMT + VR T L AA
Sbjct: 64 FR-------------DDDPDRYTQLRRLRDLEKAGGVRARDLMTSPALSVRADTTLAQAA 110
Query: 201 RLLLETKYRRLPVVDADG 218
R++ +RLPVVDA G
Sbjct: 111 RVMARASVKRLPVVDALG 128
>gi|353227418|emb|CCA77926.1| hypothetical protein PIIN_00640 [Piriformospora indica DSM 11827]
Length = 672
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 58/116 (50%), Gaps = 8/116 (6%)
Query: 103 TVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWK 162
TV +A ++ KR V+D++ L G+ + DL S+ S E T +
Sbjct: 90 TVADASQLCAAKRTDCVLVVDEEEGLSGIFTAKDLAFRVSLPSSF--------ECQPTDR 141
Query: 163 TFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADG 218
F +V + +V +MTP P+V R+TT+ +A +L+++ +R LPV + DG
Sbjct: 142 VFEQVTAMGLDPRTTLVSTIMTPNPMVTRDTTSATEALQLMVQRGFRHLPVCNDDG 197
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 56/128 (43%), Gaps = 17/128 (13%)
Query: 97 VVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL--ALDSISGSGRADNSMF 154
V + TT+ EAL+++V++ PV +DD +VGL+ + ALD I A ++
Sbjct: 168 VTRDTTSATEALQLMVQRGFRHLPVCNDDGNVVGLLDITKVFHEALDKIERGSSASQKLY 227
Query: 155 PEVDSTWKTFNE-------------VQKLLSKTNGKMVGDLMTP--APVVVRETTNLEDA 199
++S + V+ L KT + +M P V T + DA
Sbjct: 228 SALESVQTELDGVASNPQAAAMMAFVESLRDKTALPDLSTVMDSRTQPATVGPRTTVRDA 287
Query: 200 ARLLLETK 207
ARL+ E +
Sbjct: 288 ARLMKENR 295
>gi|269127025|ref|YP_003300395.1| CBS domain containing membrane protein [Thermomonospora curvata DSM
43183]
gi|268311983|gb|ACY98357.1| CBS domain containing membrane protein [Thermomonospora curvata DSM
43183]
Length = 201
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 57/120 (47%), Gaps = 15/120 (12%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P TV +A+ +L E IT PV+DD +VG+VS+ DLL G AD F
Sbjct: 14 VSPDATVRQAIRVLYEHNITAAPVVDDSGAMVGIVSEMDLL-----RGEFAADPRAFAR- 67
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
+L+ M+ D+ T P TT++ + A +++ T + +PV+D D
Sbjct: 68 -PVAGPHEPPPRLVRDV---MITDVRTAQP-----TTDVAELAEMMMRTAIKSVPVLDGD 118
>gi|329962623|ref|ZP_08300571.1| inosine-5'-monophosphate dehydrogenase [Bacteroides fluxus YIT
12057]
gi|328529654|gb|EGF56552.1| inosine-5'-monophosphate dehydrogenase [Bacteroides fluxus YIT
12057]
Length = 491
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 62/120 (51%), Gaps = 31/120 (25%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
+K +TV +AL ++ E +I G PV+DD+ LVG+V++ DL R + M +
Sbjct: 104 IKRGSTVADALALMAEYKIGGIPVVDDEKYLVGIVTNRDL----------RFEKDMDKRI 153
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
D ++++K N ++T P TT++E +++L E + +LPVVD +
Sbjct: 154 D----------EVMTKDN------IITTNP-----TTDMEAVSQILQEHRIEKLPVVDKE 192
Score = 40.8 bits (94), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 31/51 (60%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL 137
D + TK+ + PTT ++ +IL E RI PV+D + KLVGL++ D+
Sbjct: 154 DEVMTKDNIITTNPTTDMEAVSQILQEHRIEKLPVVDKENKLVGLITYKDI 204
>gi|240102816|ref|YP_002959125.1| inosine 5'-monophosphate dehydrogenase [Thermococcus gammatolerans
EJ3]
gi|239910370|gb|ACS33261.1| Inosine-5'-monophosphate dehydrogenase (IMP dehydrogenase) (IMPDH)
(IMPD) (guaB) [Thermococcus gammatolerans EJ3]
Length = 485
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 57/126 (45%), Gaps = 35/126 (27%)
Query: 93 EELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNS 152
E++ + P TVD A+ ++ I G PV++D K+VG++S D+
Sbjct: 101 EDVISISPDETVDYAIFLMERNDIDGLPVVED-GKVVGVISKKDI--------------- 144
Query: 153 MFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLP 212
+ GK+V D+MT P+ V E E+A L+ E + RLP
Sbjct: 145 -------------------AVKQGKLVRDIMTGEPITVPENVTAEEALTLMFEHRIDRLP 185
Query: 213 VVDADG 218
VV+++G
Sbjct: 186 VVNSEG 191
>gi|373114729|ref|ZP_09528938.1| inosine-5'-monophosphate dehydrogenase [Fusobacterium necrophorum
subsp. funduliforme 1_1_36S]
gi|371650909|gb|EHO16345.1| inosine-5'-monophosphate dehydrogenase [Fusobacterium necrophorum
subsp. funduliforme 1_1_36S]
Length = 444
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 73/176 (41%), Gaps = 45/176 (25%)
Query: 51 TSSDRVSALRRSSAV-FASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTT-----TV 104
T SD AL R + F ++ A D + E + P T TV
Sbjct: 12 TESDLAIALARQGGIGFIHKNMSIEEQAAEV------DRVKRSESGMITNPITLNQESTV 65
Query: 105 DEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTF 164
+A EI+ +I+G PVI++D KL+G++++ D+ K
Sbjct: 66 MQAEEIMRRYKISGLPVIEEDGKLIGIITNRDI---------------------KYRKDM 104
Query: 165 NEVQKLLSKTNGKMVGDLMTPAPVVVRET-TNLEDAARLLLETKYRRLPVVDADGW 219
N+ +VGD+MT ++ T L++A +LL + +LP+ D +G+
Sbjct: 105 NQ-----------LVGDIMTKEKLITAPVGTTLDEAKEVLLANRIEKLPITDEEGY 149
Score = 42.0 bits (97), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL 137
VGD MT KE+L TT+DEA E+L+ RI P+ D++ L GL++ D+
Sbjct: 108 VGDIMT-KEKLITAPVGTTLDEAKEVLLANRIEKLPITDEEGYLKGLITIKDI 159
>gi|357030115|ref|ZP_09092079.1| hypothetical protein MEA186_34834 [Mesorhizobium amorphae
CCNWGS0123]
gi|355533090|gb|EHH02430.1| hypothetical protein MEA186_34834 [Mesorhizobium amorphae
CCNWGS0123]
Length = 232
Score = 50.1 bits (118), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 63/119 (52%), Gaps = 5/119 (4%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
++PT ++ +A +++ ++++G PVI D LVG+VS+ D L + G+ R + +
Sbjct: 14 IEPTASISDAAGLMLSRKVSGLPVICSDGTLVGVVSEGDFLRRVEL-GTKRNRSRWLEFL 72
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDA 216
S + +E K NG+ + ++MT + V +L + L+ +R+PVVD+
Sbjct: 73 VSPGRAADE----YVKANGRRIEEVMTAEVITVPPAASLPEIVELMARHHVKRVPVVDS 127
>gi|253699582|ref|YP_003020771.1| hypothetical protein GM21_0947 [Geobacter sp. M21]
gi|251774432|gb|ACT17013.1| CBS domain containing protein [Geobacter sp. M21]
Length = 216
Score = 49.7 bits (117), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 59/120 (49%), Gaps = 17/120 (14%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
+ P +V EAL ++ +K+I PV++ + KLVG+VSD DL + A
Sbjct: 14 ITPDISVTEALRLMGDKKIRRLPVVERNGKLVGIVSDRDLFQASPSPATSLA-------- 65
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
W E+ LL+K V M + V E T LE+AAR++++ + LPV+ D
Sbjct: 66 --IW----EIHDLLAKLT---VDKTMAKDVITVTEDTPLEEAARVMVDRRIGGLPVMKGD 116
Score = 37.7 bits (86), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 55/114 (48%), Gaps = 9/114 (7%)
Query: 75 SAAPSSGVYTVGDFM-------TTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWK 127
S A S ++ + D + T +++ V T ++EA ++V++RI G PV+ D
Sbjct: 59 SPATSLAIWEIHDLLAKLTVDKTMAKDVITVTEDTPLEEAARVMVDRRIGGLPVMKGD-A 117
Query: 128 LVGLVSDYDLL-ALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVG 180
LVG++++ DL AL + G R + T +V + + + G +VG
Sbjct: 118 LVGIITESDLFQALLELLGGRRQGVRLTVTTTGAKGTLADVAQTIYEAGGDIVG 171
Score = 36.6 bits (83), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 27/41 (65%)
Query: 178 MVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADG 218
+V D MTP P+ + ++ +A RL+ + K RRLPVV+ +G
Sbjct: 2 LVRDRMTPNPITITPDISVTEALRLMGDKKIRRLPVVERNG 42
>gi|408828377|ref|ZP_11213267.1| hypothetical protein SsomD4_14410 [Streptomyces somaliensis DSM
40738]
Length = 218
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 54/134 (40%), Gaps = 26/134 (19%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TVG+ MT E+ P T+ +E +L RI G PV+D D K+VG+VS DL
Sbjct: 6 TVGEVMTG--EVVQAHPDTSAEEVSRLLSAHRIGGLPVVDGDDKVVGVVSRTDL------ 57
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
+ G LMT V V + DAAR++
Sbjct: 58 ------------------AGRRAARGRAGPGEAATAGHLMTSPAVTVHPEQRVADAARVM 99
Query: 204 LETKYRRLPVVDAD 217
+ RLPVVD +
Sbjct: 100 ERRRVDRLPVVDEE 113
>gi|374580522|ref|ZP_09653616.1| drug resistance transporter, EmrB/QacA subfamily [Desulfosporosinus
youngiae DSM 17734]
gi|374416604|gb|EHQ89039.1| drug resistance transporter, EmrB/QacA subfamily [Desulfosporosinus
youngiae DSM 17734]
Length = 624
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 62/118 (52%), Gaps = 10/118 (8%)
Query: 103 TVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL---ALDSISGSGRADNSMFPEVDS 159
+++ +E +E R +G PVID+ ++G VSD D+L A + G + + + P+ +
Sbjct: 486 SIERVIEKFIEYRTSGLPVIDNSRHIIGYVSDGDVLRYMAKQDVHVVGESFSLVLPDNE- 544
Query: 160 TWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
+ ++ ++LL + V ++ T + V +T+L + RL E K R++PV D
Sbjct: 545 --EFMSKARELLQRN----VLEIATKHTITVELSTSLAEVCRLFYEHKLRKIPVTQND 596
>gi|163782022|ref|ZP_02177021.1| inosine monophosphate dehydrogenase [Hydrogenivirga sp. 128-5-R1-1]
gi|159882554|gb|EDP76059.1| inosine monophosphate dehydrogenase [Hydrogenivirga sp. 128-5-R1-1]
Length = 490
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 60/121 (49%), Gaps = 29/121 (23%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V+P +V EALEI+ +I+G PV+D++ KLVG++++ DL + + + P
Sbjct: 103 VRPEASVREALEIMERYKISGVPVVDEEEKLVGILTNRDLRFI-------KPSDYDKP-- 153
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
V + ++K N V E L++A LL + K +LP+VD++
Sbjct: 154 ---------VTQFMTKEN-----------LVTAEEGIGLDEATELLQKFKVEKLPIVDSE 193
Query: 218 G 218
G
Sbjct: 194 G 194
>gi|319900081|ref|YP_004159809.1| inosine-5'-monophosphate dehydrogenase [Bacteroides helcogenes P
36-108]
gi|319415112|gb|ADV42223.1| inosine-5'-monophosphate dehydrogenase [Bacteroides helcogenes P
36-108]
Length = 491
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 63/120 (52%), Gaps = 31/120 (25%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
+K +TV +AL+++ E +I G PV+DD+ LVG+V++ DL R + + +
Sbjct: 104 IKRGSTVADALDLMAEYKIGGIPVVDDERYLVGIVTNRDL----------RFEKDLSKRI 153
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
D ++++K N ++T P TT+++ +++L E + +LPVVD D
Sbjct: 154 D----------EVMTKEN------IITTNP-----TTDMDAVSQILQEHRIEKLPVVDKD 192
Score = 45.4 bits (106), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 31/51 (60%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL 137
D + TKE + PTT +D +IL E RI PV+D D KLVGL++ D+
Sbjct: 154 DEVMTKENIITTNPTTDMDAVSQILQEHRIEKLPVVDKDNKLVGLITYKDI 204
>gi|406998496|gb|EKE16427.1| CBS protein [uncultured bacterium]
Length = 150
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 64/130 (49%), Gaps = 3/130 (2%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D MT +++ V +D+ IL+E RI G PV+ DD KLVG++++ D DS +
Sbjct: 3 VKDIMT--KDVITVSSDHGIDQVANILIENRIHGLPVV-DDGKLVGIITETDFFVKDSFN 59
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+ + + K + +K +++ D+MT V V E ++E +
Sbjct: 60 FHLPSYIDFIRKTKFSGKMSSTEKKQIAELINSTAKDIMTEQCVTVCEEDDIEKLLNVFK 119
Query: 205 ETKYRRLPVV 214
+T++ +PV+
Sbjct: 120 DTRFSTVPVI 129
>gi|402847927|ref|ZP_10896195.1| Inosine-5'-monophosphate dehydrogenase [Rhodovulum sp. PH10]
gi|402501722|gb|EJW13366.1| Inosine-5'-monophosphate dehydrogenase [Rhodovulum sp. PH10]
Length = 243
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 62/111 (55%), Gaps = 7/111 (6%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGS 146
D MT++ + ++P TV+EA+ +++ RI+G PV+D + LVG+V++ D L + +G+
Sbjct: 5 DVMTSR--VVSIRPEATVEEAVRQMLDNRISGLPVVDGEGDLVGIVTEGDFLR-RAETGT 61
Query: 147 GRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLE 197
R P N + K +++G+ V ++MT PV V E T L+
Sbjct: 62 CRK----RPRWLEILIGPNSLAKDYVRSHGRKVEEVMTRDPVTVTEDTTLD 108
>gi|385810357|ref|YP_005846753.1| IMP dehydrogenase [Ignavibacterium album JCM 16511]
gi|383802405|gb|AFH49485.1| IMP dehydrogenase [Ignavibacterium album JCM 16511]
Length = 490
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 59/121 (48%), Gaps = 33/121 (27%)
Query: 100 PTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRAD-NSMFPEVD 158
P T+ EAL+++ + I+G PV+D+ KLVG++++ DL R + N P
Sbjct: 104 PDKTIGEALQLMKKYSISGIPVVDNKGKLVGILTNRDL----------RFEPNHSLP--- 150
Query: 159 STWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADG 218
V +L++K N + AP+ T LE A ++L K +LPVVD +G
Sbjct: 151 --------VSELMTKEN-------LITAPI----GTTLEKAEKILQRYKIEKLPVVDKNG 191
Query: 219 W 219
Sbjct: 192 M 192
>gi|126701088|ref|YP_001089985.1| hypothetical protein CD630_34650 [Clostridium difficile 630]
gi|254977089|ref|ZP_05273561.1| hypothetical protein CdifQC_17333 [Clostridium difficile QCD-66c26]
gi|255094417|ref|ZP_05323895.1| hypothetical protein CdifC_17436 [Clostridium difficile CIP 107932]
gi|255102674|ref|ZP_05331651.1| hypothetical protein CdifQCD-6_17826 [Clostridium difficile
QCD-63q42]
gi|255308495|ref|ZP_05352666.1| hypothetical protein CdifA_18036 [Clostridium difficile ATCC 43255]
gi|255316169|ref|ZP_05357752.1| hypothetical protein CdifQCD-7_17524 [Clostridium difficile
QCD-76w55]
gi|255518830|ref|ZP_05386506.1| hypothetical protein CdifQCD-_17063 [Clostridium difficile
QCD-97b34]
gi|255652009|ref|ZP_05398911.1| hypothetical protein CdifQCD_17625 [Clostridium difficile
QCD-37x79]
gi|255657419|ref|ZP_05402828.1| hypothetical protein CdifQCD-2_17366 [Clostridium difficile
QCD-23m63]
gi|260684984|ref|YP_003216269.1| hypothetical protein CD196_3255 [Clostridium difficile CD196]
gi|260688642|ref|YP_003219776.1| hypothetical protein CDR20291_3301 [Clostridium difficile R20291]
gi|296449015|ref|ZP_06890805.1| CBS domain protein [Clostridium difficile NAP08]
gi|296879838|ref|ZP_06903811.1| CBS domain protein [Clostridium difficile NAP07]
gi|306521751|ref|ZP_07408098.1| hypothetical protein CdifQ_19995 [Clostridium difficile QCD-32g58]
gi|384362658|ref|YP_006200510.1| hypothetical protein CDBI1_16945 [Clostridium difficile BI1]
gi|423080793|ref|ZP_17069410.1| CBS domain protein [Clostridium difficile 002-P50-2011]
gi|423087194|ref|ZP_17075583.1| CBS domain protein [Clostridium difficile 050-P50-2011]
gi|423090563|ref|ZP_17078852.1| CBS domain protein [Clostridium difficile 70-100-2010]
gi|115252525|emb|CAJ70368.1| conserved hypothetical protein [Clostridium difficile 630]
gi|260211147|emb|CBA66586.1| conserved hypothetical protein [Clostridium difficile CD196]
gi|260214659|emb|CBE07281.1| conserved hypothetical protein [Clostridium difficile R20291]
gi|296262108|gb|EFH08913.1| CBS domain protein [Clostridium difficile NAP08]
gi|296429127|gb|EFH15001.1| CBS domain protein [Clostridium difficile NAP07]
gi|357545132|gb|EHJ27112.1| CBS domain protein [Clostridium difficile 050-P50-2011]
gi|357552282|gb|EHJ34056.1| CBS domain protein [Clostridium difficile 002-P50-2011]
gi|357556267|gb|EHJ37882.1| CBS domain protein [Clostridium difficile 70-100-2010]
Length = 153
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 69/135 (51%), Gaps = 4/135 (2%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
T + MTT ++ V K ++ + +L+ ++I G PV+D + ++VG++S+ D+L +
Sbjct: 5 TAKEIMTT--DVIVAKQDDSIADVANMLIAEKIGGLPVVDSENRVVGIISETDILKKEKY 62
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
+ N + + +V+K + + VG+LM+ + V E +D A ++
Sbjct: 63 IEAPLYINLLQGLI--FLDDLKKVEKDIKQVAAYKVGELMSKDIIKVHEDDKFDDVANVM 120
Query: 204 LETKYRRLPVVDADG 218
++ R+PVVD D
Sbjct: 121 IKKSINRVPVVDDDN 135
Score = 37.4 bits (85), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Query: 65 VFASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDD 124
+F Y VG+ M+ +++ V D+ ++++K I PV+DD
Sbjct: 76 IFLDDLKKVEKDIKQVAAYKVGELMS--KDIIKVHEDDKFDDVANVMIKKSINRVPVVDD 133
Query: 125 DWKLVGLVSDYDLL 138
D KL G++ YD++
Sbjct: 134 DNKLKGIICRYDII 147
>gi|163848024|ref|YP_001636068.1| hypothetical protein Caur_2472 [Chloroflexus aurantiacus J-10-fl]
gi|222525911|ref|YP_002570382.1| hypothetical protein Chy400_2666 [Chloroflexus sp. Y-400-fl]
gi|163669313|gb|ABY35679.1| CBS domain containing protein [Chloroflexus aurantiacus J-10-fl]
gi|222449790|gb|ACM54056.1| CBS domain containing membrane protein [Chloroflexus sp. Y-400-fl]
Length = 435
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 58/117 (49%), Gaps = 7/117 (5%)
Query: 102 TTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTW 161
T+V E + +L+E+ + PV+D + +++G+V+D DLL +S + P +
Sbjct: 135 TSVGELVRLLLERGLRAMPVVDAERRVIGIVTDADLLQ-RGVSQLPLHLQQLLPGAERAA 193
Query: 162 KTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADG 218
+ + D+MTP P + T +L AA L+ E ++RLPVVD G
Sbjct: 194 HLAAVAAR------PERAADVMTPNPTTIPATASLTQAALLMTEHDHKRLPVVDEAG 244
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 26/35 (74%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLV 132
V P T + A+E+++E+RI PV+D++ +LVG+V
Sbjct: 380 VNPDTPIISAVELMIERRIKRLPVVDEEGRLVGMV 414
Score = 37.7 bits (86), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 71/162 (43%), Gaps = 29/162 (17%)
Query: 73 ANSAAPSSGVY---------TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVID 123
AN+ A SS V TVG+ M ++ V P T + E L+ ++ V+D
Sbjct: 260 ANTFASSSEVLPGSILTTAKTVGEVMI--RDVPTVTPETPLAETLDRILSTPRRRVVVVD 317
Query: 124 DDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTF-------NEVQKLLSKTNG 176
+ ++VG++SD D+L RA + P + + + E++ L
Sbjct: 318 QNRRVVGIISDGDILR--------RAARPVAPGLLQRFAVWIGGGARPPELELALKNLTA 369
Query: 177 KMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADG 218
V MT + V T + A L++E + +RLPVVD +G
Sbjct: 370 AAV---MTSPVLTVNPDTPIISAVELMIERRIKRLPVVDEEG 408
>gi|75675216|ref|YP_317637.1| hypothetical protein Nwi_1023 [Nitrobacter winogradskyi Nb-255]
gi|74420086|gb|ABA04285.1| IMP dehydrogenase [Nitrobacter winogradskyi Nb-255]
Length = 243
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 63/135 (46%), Gaps = 16/135 (11%)
Query: 88 FMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSG 147
MT K L VK T + EA ++++E I+G PV+DD +L+G+VS+ D + I G
Sbjct: 6 IMTHK--LITVKADTPIVEAAKLMLESHISGLPVVDDAGRLLGIVSESDFMRRSEIGTHG 63
Query: 148 RADNSMFPEVDSTWKTF----NEVQKLLSKTNGKMVGDLMTPAPV-VVRETTNLEDAARL 202
P + W F + + +G+ V +MT + E LE+ RL
Sbjct: 64 -------PRI--RWLDFLMGTEKAAIDFVREHGRKVSAIMTRETLFTATEDMPLEELVRL 114
Query: 203 LLETKYRRLPVVDAD 217
+ +RLPV+ D
Sbjct: 115 MERQNIKRLPVIRGD 129
>gi|90422168|ref|YP_530538.1| hypothetical protein RPC_0646 [Rhodopseudomonas palustris BisB18]
gi|90104182|gb|ABD86219.1| CBS [Rhodopseudomonas palustris BisB18]
Length = 332
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 66/131 (50%), Gaps = 4/131 (3%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGS 146
D MTT ++ VV P ++ E IL+ R++ PV+D D +G+VS++DL+ +
Sbjct: 5 DVMTT--DVSVVGPNSSSAEVARILLATRVSALPVVDHDGAPIGVVSEWDLVGQHATDRV 62
Query: 147 GRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLET 206
+ + + + + +Q + TN + ++M + V ETT + + ARL+ E
Sbjct: 63 AKRERWLSHLAEGQPLAADFLQS-VDPTN-RTTAEIMHQPVIAVPETTPIAEVARLIAEH 120
Query: 207 KYRRLPVVDAD 217
+ +R+ V D
Sbjct: 121 RIKRVFVTRGD 131
>gi|18976657|ref|NP_578014.1| inosine 5'-monophosphate dehydrogenase [Pyrococcus furiosus DSM
3638]
gi|397650783|ref|YP_006491364.1| inosine 5'-monophosphate dehydrogenase [Pyrococcus furiosus COM1]
gi|1170554|sp|P42851.1|IMDH_PYRFU RecName: Full=Inosine-5'-monophosphate dehydrogenase; Short=IMP
dehydrogenase; Short=IMPD; Short=IMPDH
gi|595287|gb|AAC44532.1| IMP dehydrogenase [Pyrococcus furiosus]
gi|18892229|gb|AAL80409.1| inosine-5'-monophosphate dehydrogenase (imp dehydrogenase)
[Pyrococcus furiosus DSM 3638]
gi|393188374|gb|AFN03072.1| inosine 5'-monophosphate dehydrogenase [Pyrococcus furiosus COM1]
Length = 485
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 62/126 (49%), Gaps = 35/126 (27%)
Query: 93 EELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNS 152
E++ + P T+D AL ++ + I G PV+++D ++VG+++ D+ A +
Sbjct: 101 EDVITIAPDETIDYALFLMEKHGIDGLPVVEED-RVVGIITKKDIAARE----------- 148
Query: 153 MFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLP 212
G+ V +LMT + V E+ ++E+A ++++E + RLP
Sbjct: 149 -----------------------GRTVKELMTREVITVPESVDVEEALKIMMENRIDRLP 185
Query: 213 VVDADG 218
VV+ DG
Sbjct: 186 VVNEDG 191
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 69 GTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKL 128
G +T A G TV + MT E+ V + V+EAL+I++E RI PV+++D KL
Sbjct: 137 GIITKKDIAAREG-RTVKELMT--REVITVPESVDVEEALKIMMENRIDRLPVVNEDGKL 193
Query: 129 VGLVSDYDLLA 139
VGL++ DL+A
Sbjct: 194 VGLITMSDLVA 204
>gi|315221921|ref|ZP_07863832.1| CBS domain pair protein [Streptococcus anginosus F0211]
gi|421491265|ref|ZP_15938631.1| CBS domain protein [Streptococcus anginosus SK1138]
gi|315188887|gb|EFU22591.1| CBS domain pair protein [Streptococcus anginosus F0211]
gi|400371367|gb|EJP24326.1| CBS domain protein [Streptococcus anginosus SK1138]
Length = 218
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 70/131 (53%), Gaps = 20/131 (15%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT K + + P TTV A +I+ E+ + PVI++D +LVGLV++ +I+
Sbjct: 3 VKDFMTRK--VVYISPDTTVAHAADIMREQGLHRLPVIEND-QLVGLVTE------GTIA 53
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+ + +T + E+ LL+KT K D+M V V + +LEDA L+L
Sbjct: 54 EASPSK--------ATSLSIYEMNYLLNKTKIK---DVMIRDVVTVSQFASLEDATYLML 102
Query: 205 ETKYRRLPVVD 215
+ K LPVVD
Sbjct: 103 KNKIGILPVVD 113
>gi|408381781|ref|ZP_11179329.1| CBS domain-containing membrane protein [Methanobacterium formicicum
DSM 3637]
gi|407815712|gb|EKF86282.1| CBS domain-containing membrane protein [Methanobacterium formicicum
DSM 3637]
Length = 157
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 64/115 (55%), Gaps = 9/115 (7%)
Query: 111 LVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFP------EVDSTWK-T 163
L E +I+G PV++ + +LVG++S+ D++ L I + P E+ K
Sbjct: 27 LRENKISGAPVMNKEDQLVGIISEGDIMRLLEIHSPHI--RLILPSPLDLIELPVRMKYE 84
Query: 164 FNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADG 218
+E+ + ++K ++G++MT V + +++ DAA+L+ +RLPVVD+DG
Sbjct: 85 MDEIAEDMNKAASVLIGEIMTKKVVTIDPDSDISDAAQLMDTHDVKRLPVVDSDG 139
>gi|322387419|ref|ZP_08061029.1| CBS domain protein [Streptococcus infantis ATCC 700779]
gi|417936147|ref|ZP_12579464.1| CBS domain protein [Streptococcus infantis X]
gi|419842595|ref|ZP_14365932.1| CBS domain protein [Streptococcus infantis ATCC 700779]
gi|321141948|gb|EFX37443.1| CBS domain protein [Streptococcus infantis ATCC 700779]
gi|343403056|gb|EGV15561.1| CBS domain protein [Streptococcus infantis X]
gi|385703540|gb|EIG40653.1| CBS domain protein [Streptococcus infantis ATCC 700779]
Length = 218
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 72/137 (52%), Gaps = 21/137 (15%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT K + + P TTV A +++ E+ + PVI++D KLVGLV++ +
Sbjct: 3 VKDFMTRK--VVYISPDTTVAHAADLMREQGLHRLPVIEND-KLVGLVTEGTI------- 52
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
A+ S P ++ F E+ LL+KT V D+M V V +LEDA L+L
Sbjct: 53 ----AEAS--PSKATSLSIF-EMNYLLNKTK---VKDVMIRDVVTVSGYASLEDATYLML 102
Query: 205 ETKYRRLPVVDADGWNY 221
+ K LPVVD +G Y
Sbjct: 103 KNKIGILPVVD-NGQLY 118
>gi|217967139|ref|YP_002352645.1| inosine-5'-monophosphate dehydrogenase [Dictyoglomus turgidum DSM
6724]
gi|217336238|gb|ACK42031.1| inosine-5'-monophosphate dehydrogenase [Dictyoglomus turgidum DSM
6724]
Length = 493
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 55/119 (46%), Gaps = 33/119 (27%)
Query: 100 PTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDS 159
P TV EAL I+ + I+G PV++ D KLVG+V++ DL R ++ M
Sbjct: 105 PDQTVGEALSIMAKYHISGLPVVERDGKLVGIVTNRDL----------RFESDM------ 148
Query: 160 TWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRET-TNLEDAARLLLETKYRRLPVVDAD 217
K V ++MT ++V + ++DA +L K +LP+VD D
Sbjct: 149 ----------------NKKVSEIMTKDNLIVAQVGITIKDAQEILQRYKIEKLPIVDKD 191
Score = 38.1 bits (87), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 30/49 (61%)
Query: 89 MTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL 137
+ TK+ L V + T+ +A EIL +I P++D D+KL GL++ D+
Sbjct: 155 IMTKDNLIVAQVGITIKDAQEILQRYKIEKLPIVDKDFKLKGLITIKDI 203
>gi|309798594|ref|ZP_07692869.1| CBS domain protein [Streptococcus infantis SK1302]
gi|308117830|gb|EFO55231.1| CBS domain protein [Streptococcus infantis SK1302]
Length = 218
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 70/133 (52%), Gaps = 20/133 (15%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT K + + P TTV A +++ E+ + PVI++D KLVGLV++ +
Sbjct: 3 VKDFMTRK--VVYISPDTTVAHAADLMREQGLHRLPVIEND-KLVGLVTEGTI------- 52
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
A+ S P ++ F E+ LL+KT V D+M V V +LEDA L+L
Sbjct: 53 ----AEAS--PSKATSLSIF-EMNYLLNKTK---VKDVMIRNVVTVSGYASLEDATYLML 102
Query: 205 ETKYRRLPVVDAD 217
+ K LPV+D +
Sbjct: 103 KNKIGILPVIDNE 115
>gi|386814873|ref|ZP_10102091.1| CBS domain containing membrane protein [Thiothrix nivea DSM 5205]
gi|386419449|gb|EIJ33284.1| CBS domain containing membrane protein [Thiothrix nivea DSM 5205]
Length = 149
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 66/132 (50%), Gaps = 13/132 (9%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL--ALDS 142
V D MTT + K T V + +E++ +I+G PV+DD+ +VG+VS+ D+L
Sbjct: 3 VKDIMTT--NVKTAKADTPVRDIVEVMCFNKISGLPVVDDNNNVVGVVSEKDVLRKMFPD 60
Query: 143 ISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARL 202
IS R + + P+ + K +++ L+ KT GD+M+ + A L
Sbjct: 61 ISDVAREEGA--PDFEKMEKDYSDA--LMLKT-----GDIMSKLVASASPDMPVMKAVSL 111
Query: 203 LLETKYRRLPVV 214
+ K RR+PVV
Sbjct: 112 MCVQKIRRIPVV 123
>gi|154249344|ref|YP_001410169.1| signal transduction protein [Fervidobacterium nodosum Rt17-B1]
gi|154153280|gb|ABS60512.1| putative signal transduction protein with CBS domains
[Fervidobacterium nodosum Rt17-B1]
Length = 309
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 53/121 (43%), Gaps = 29/121 (23%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
VKP TV + EIL KRI+G PV+DDD +VG++S D++ + ++ +V
Sbjct: 28 VKPDRTVAQVKEILRLKRISGVPVVDDDGNVVGIISIEDII-------KSLENGTLHEKV 80
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
D MT + + + L++ + KY R PVVD D
Sbjct: 81 DKH----------------------MTARVICLHKDMTLQEVIKQFERYKYGRFPVVDDD 118
Query: 218 G 218
G
Sbjct: 119 G 119
>gi|21225805|ref|NP_631584.1| hypothetical protein SCO7540 [Streptomyces coelicolor A3(2)]
gi|7799276|emb|CAB90898.1| conserved hypothetical protein [Streptomyces coelicolor A3(2)]
Length = 223
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 60/121 (49%), Gaps = 11/121 (9%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V+ T E +L+E IT PV+D++ + VG+VS+ DLL + G G D S
Sbjct: 17 VQRGTPFKEIAHLLLEYDITAVPVVDEENRPVGVVSEADLL--QKMWG-GEPDGSAE--- 70
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
+ W + K + LMT P+ E+ ++ DAAR++ + +RL VVD D
Sbjct: 71 HAEWSRASA-----GKADATDAAGLMTSPPLCALESWSVVDAARVMARHRIKRLLVVDGD 125
Query: 218 G 218
G
Sbjct: 126 G 126
>gi|448336455|ref|ZP_21525554.1| peptidase M50 [Natrinema pallidum DSM 3751]
gi|445629195|gb|ELY82489.1| peptidase M50 [Natrinema pallidum DSM 3751]
Length = 393
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 36/57 (63%), Gaps = 4/57 (7%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDW----KLVGLVSDYD 136
TVGD MT +LH+V P TTV E + + +R TG+PV+D D +L+GLV+ D
Sbjct: 251 TVGDIMTPASDLHIVDPETTVAELIRRMFTERHTGYPVVDADAFEGERLIGLVTLTD 307
>gi|319939590|ref|ZP_08013949.1| AcuB family protein [Streptococcus anginosus 1_2_62CV]
gi|335032128|ref|ZP_08525535.1| CBS domain protein [Streptococcus anginosus SK52 = DSM 20563]
gi|319811179|gb|EFW07485.1| AcuB family protein [Streptococcus anginosus 1_2_62CV]
gi|333767799|gb|EGL45022.1| CBS domain protein [Streptococcus anginosus SK52 = DSM 20563]
Length = 218
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 70/131 (53%), Gaps = 20/131 (15%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT K + + P TTV A +I+ E+ + PVI++D +LVGLV++ +I+
Sbjct: 3 VKDFMTRK--VVYISPDTTVAHAADIMREQGLHRLPVIEND-QLVGLVTE------GTIA 53
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+ + +T + E+ LL+KT K D+M V V + +LEDA L+L
Sbjct: 54 EASPSK--------ATSLSIYEMNYLLNKTKIK---DVMIRDVVTVSQFASLEDATYLML 102
Query: 205 ETKYRRLPVVD 215
+ K LPVVD
Sbjct: 103 KNKIGILPVVD 113
>gi|421277076|ref|ZP_15727896.1| CBS domain pair family protein [Streptococcus mitis SPAR10]
gi|395876357|gb|EJG87433.1| CBS domain pair family protein [Streptococcus mitis SPAR10]
Length = 218
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 72/137 (52%), Gaps = 21/137 (15%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT K + + P TTV A +++ E+ + PVI++D KLVGLV++ +
Sbjct: 3 VKDFMTRK--VVYISPDTTVAHAADLMREQGLHRLPVIEND-KLVGLVTEGTI------- 52
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
A+ S P ++ F E+ LL+KT V D+M V V +LEDA L+L
Sbjct: 53 ----AEAS--PSKATSLSIF-EMNYLLNKTK---VKDVMIRDVVTVSGYASLEDATYLML 102
Query: 205 ETKYRRLPVVDADGWNY 221
+ K LPVVD +G Y
Sbjct: 103 KNKIGILPVVD-NGQLY 118
>gi|417938413|ref|ZP_12581711.1| CBS domain protein [Streptococcus infantis SK970]
gi|343391503|gb|EGV04078.1| CBS domain protein [Streptococcus infantis SK970]
Length = 218
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 72/137 (52%), Gaps = 21/137 (15%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT K + + P TTV A +++ E+ + PVI++D KLVGLV++ +
Sbjct: 3 VKDFMTRK--VVYISPDTTVAHAADLMREQGLHRLPVIEND-KLVGLVTEGTI------- 52
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
A+ S P ++ F E+ LL+KT V D+M V V +LEDA L+L
Sbjct: 53 ----AEAS--PSKATSLSIF-EMNYLLNKTK---VKDVMIRDVVTVSGYASLEDATYLML 102
Query: 205 ETKYRRLPVVDADGWNY 221
+ K LPVVD +G Y
Sbjct: 103 KNKIGILPVVD-NGQLY 118
>gi|322390023|ref|ZP_08063561.1| CBS domain protein [Streptococcus parasanguinis ATCC 903]
gi|321143277|gb|EFX38717.1| CBS domain protein [Streptococcus parasanguinis ATCC 903]
Length = 255
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 74/146 (50%), Gaps = 22/146 (15%)
Query: 74 NSAAPSSG--VYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGL 131
N S G V V DFMT K + + P TT+ A +++ E+ + PVI++D KLVGL
Sbjct: 27 NKTNKSIGELVMAVKDFMTRK--VVYISPDTTIAHAADLMREQGLHRLPVIEND-KLVGL 83
Query: 132 VSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVR 191
V++ +I+ + P ++ F E+ LL+KT V D+M + V
Sbjct: 84 VTE------GTIAEAS-------PSKATSLSIF-EMNYLLNKTK---VKDVMLRDVITVS 126
Query: 192 ETTNLEDAARLLLETKYRRLPVVDAD 217
+ +LEDA L+ + K LPVVD D
Sbjct: 127 KFASLEDATYLMYKNKVGILPVVDND 152
>gi|319778179|ref|YP_004134609.1| cbs domain containing protein [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317171898|gb|ADV15435.1| CBS domain containing protein [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 232
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 61/124 (49%), Gaps = 13/124 (10%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
+ P+ ++ +A +++ +I+G PVI D LVG++S+ DLL + + G+ R
Sbjct: 14 IDPSASIADAAGLMLSSKISGLPVIRRDGALVGIISEGDLLRREEL-GTQRK-------- 64
Query: 158 DSTWKTF----NEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPV 213
W F V + NG+ + ++MT + V +L + L+ + +R+P+
Sbjct: 65 RPRWLEFLVSPGRVAEEYVLANGRRIEEVMTDSVVTASPNASLAEVVELMTHHRIKRVPI 124
Query: 214 VDAD 217
VD D
Sbjct: 125 VDGD 128
>gi|448489161|ref|ZP_21607535.1| peptidase M50 [Halorubrum californiensis DSM 19288]
gi|445695106|gb|ELZ47217.1| peptidase M50 [Halorubrum californiensis DSM 19288]
Length = 394
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 62/135 (45%), Gaps = 30/135 (22%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TV D MT +E+LH V T+V + + + E+R TG+PV+D D +LVG+V+ D
Sbjct: 249 TVTDIMTRQEDLHTVTEDTSVADLMSRMFEERHTGYPVLDGD-QLVGMVTLEDA------ 301
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
++ EV++ + M DL+ P + A + +
Sbjct: 302 ------------------RSVREVERDAYTVDDVMATDLVAADP-----NADALTALQTM 338
Query: 204 LETKYRRLPVVDADG 218
E RLPVVDADG
Sbjct: 339 QEHGVGRLPVVDADG 353
>gi|448388307|ref|ZP_21565162.1| peptidase M50 [Haloterrigena salina JCM 13891]
gi|445670443|gb|ELZ23043.1| peptidase M50 [Haloterrigena salina JCM 13891]
Length = 392
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 65/127 (51%), Gaps = 21/127 (16%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVID----DDWKLVGLVSDYDLLA 139
TVGD MT +LH V+P TTV E ++ + +R TG+PVID + +LVGLV+ D
Sbjct: 250 TVGDIMTPASDLHTVEPETTVAELVQRMFTERHTGYPVIDTSGFEGERLVGLVTLTDARE 309
Query: 140 LDSIS-GSGRADNSMFPEV-----DSTWKTF------NEVQKLLSKTNGKMVG-----DL 182
+D + + D M ++ DS T N++ +LL +G +VG D+
Sbjct: 310 IDPVERDAFTVDEVMTTDLRTITPDSDAMTAIEEMRENDIGRLLVVEDGDLVGLISRSDV 369
Query: 183 MTPAPVV 189
MT +V
Sbjct: 370 MTAFDIV 376
>gi|421735499|ref|ZP_16174422.1| multidrug resistance transporter [Bifidobacterium bifidum IPLA
20015]
gi|407297212|gb|EKF16671.1| multidrug resistance transporter [Bifidobacterium bifidum IPLA
20015]
Length = 683
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 57/110 (51%), Gaps = 6/110 (5%)
Query: 111 LVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNE--VQ 168
+ ++ PV++ D +LVG VSD D++ S + ++ ST F++ V
Sbjct: 553 FIRLNVSSLPVVNGDGRLVGFVSDGDVMK----SIATYESRTVSTGTGSTMVVFDDETVA 608
Query: 169 KLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADG 218
+ +GK V D+ T V V ++ + AR+L + ++++LPVVD DG
Sbjct: 609 SKVQALSGKKVMDIATRKVVAVTPDQHVGEVARILAKKQFKKLPVVDGDG 658
>gi|148264366|ref|YP_001231072.1| hypothetical protein Gura_2320 [Geobacter uraniireducens Rf4]
gi|146397866|gb|ABQ26499.1| CBS domain containing protein [Geobacter uraniireducens Rf4]
Length = 150
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 70/139 (50%), Gaps = 18/139 (12%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
T D MT +++ VK TTV E E+ R++ FPV+DD+ +L+G+V++ DL+
Sbjct: 3 TAADVMT--KDVITVKTGTTVRELAELFTANRMSSFPVVDDNGELIGIVTETDLI----- 55
Query: 144 SGSGRADNSM-FPEVDST--WKTFNEVQKLLSKT----NGKMVGDLMTPAPVVVRETTNL 196
D S+ P V S W + E +K K G+ VGD+ T V+ T+ L
Sbjct: 56 ----EQDKSLHIPTVISLFDWVIYLESEKKFEKELKKMTGQTVGDIYTEDVESVKSTSLL 111
Query: 197 EDAARLLLETKYRRLPVVD 215
+ A ++ K +PVVD
Sbjct: 112 SEVADIMSSKKIHAVPVVD 130
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 35/55 (63%), Gaps = 3/55 (5%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 138
TVGD T E++ VK T+ + E +I+ K+I PV+DD KLVG++S DL+
Sbjct: 93 TVGDIYT--EDVESVKSTSLLSEVADIMSSKKIHAVPVVDDK-KLVGVISRIDLI 144
>gi|395645474|ref|ZP_10433334.1| CBS domain containing membrane protein [Methanofollis liminatans
DSM 4140]
gi|395442214|gb|EJG06971.1| CBS domain containing membrane protein [Methanofollis liminatans
DSM 4140]
Length = 283
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 62/134 (46%), Gaps = 36/134 (26%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D+MT K+ + V P+ D+ L+IL I+G PV + K+VG+V+ DLL
Sbjct: 3 VQDYMT-KDVVSVEIPSNR-DDILKILKRTGISGIPV-RERGKVVGVVTRKDLL------ 53
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
K+ V LM+P PVVV T L DAA +++
Sbjct: 54 ---------------------------RKSEETQVALLMSPKPVVVTPDTPLSDAAAVMV 86
Query: 205 ETKYRRLPVVDADG 218
YRRLPVVD +G
Sbjct: 87 RHNYRRLPVVDDNG 100
>gi|384097620|ref|ZP_09998740.1| signal transduction protein with cbs domains [Imtechella
halotolerans K1]
gi|383836502|gb|EID75909.1| signal transduction protein with cbs domains [Imtechella
halotolerans K1]
Length = 154
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 63/135 (46%), Gaps = 26/135 (19%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
+V D MTTK L +KP ++ E + + +E +ITG PV+D +LVG++SD D + S
Sbjct: 22 SVRDHMTTK--LVTLKPDQSLIEVINLFMENKITGAPVVDVAGRLVGIISDSDCMKQIS- 78
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
GR N + N + V D MT + + DAA
Sbjct: 79 --EGRYFN-------------------MPIANMR-VADYMTKEVQTIDPDKTIFDAAAEF 116
Query: 204 LETKYRRLPVVDADG 218
+T +RR PV++ DG
Sbjct: 117 FKTHHRRFPVIE-DG 130
>gi|121595740|ref|YP_987636.1| signal transduction protein [Acidovorax sp. JS42]
gi|120607820|gb|ABM43560.1| putative signal transduction protein with CBS domains [Acidovorax
sp. JS42]
Length = 226
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 68/160 (42%), Gaps = 21/160 (13%)
Query: 59 LRRSSAVFASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITG 118
LR AV A P + VGD MTT V P V++A + L E I
Sbjct: 63 LRLLEAVSAYVQTEQGPVQPRQPLSRVGDVMTTGA--LTVAPDQRVNDAWQTLAEHEIAQ 120
Query: 119 FPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKM 178
PV++D ++VGL+ D+ LD + PE + + ++ +S+
Sbjct: 121 APVVNDQGQVVGLLLRADMAPLD-----------LLPEPGAVKQAIELARRPVSEV---- 165
Query: 179 VGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADG 218
+++P P V E T L A +LL+T LPV D G
Sbjct: 166 ---MVSPVPTVA-EDTELRRVAGVLLDTGLPGLPVTDERG 201
>gi|407474893|ref|YP_006789293.1| hypothetical protein Curi_c24510 [Clostridium acidurici 9a]
gi|407051401|gb|AFS79446.1| CBS domain-containing protein [Clostridium acidurici 9a]
Length = 146
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 63/123 (51%), Gaps = 15/123 (12%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P TT++E ++L E I+G PV++++ K++G+V++ DLL + N P V
Sbjct: 14 VDPDTTIEELAKVLTENNISGVPVVENE-KIIGIVTEGDLLH--------KEVNPKTPGV 64
Query: 158 DSTW------KTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRL 211
S K F + + L K + ++MT +V E T +++ A +++ R+
Sbjct: 65 YSVMGGFAYLKEFEKYKLELQKLSAHKASEIMTTKLELVTEDTEIKEIASIMINKNINRV 124
Query: 212 PVV 214
PVV
Sbjct: 125 PVV 127
>gi|418962567|ref|ZP_13514423.1| CBS domain protein [Streptococcus anginosus subsp. whileyi CCUG
39159]
gi|383345356|gb|EID23482.1| CBS domain protein [Streptococcus anginosus subsp. whileyi CCUG
39159]
Length = 218
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 70/131 (53%), Gaps = 20/131 (15%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT K + + P TTV A +I+ E+ + PVI++D +LVGLV++ +I+
Sbjct: 3 VKDFMTRK--VVYISPDTTVAHAADIMREQGLHRLPVIEND-QLVGLVTE------GTIA 53
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+ + +T + E+ LL+KT K D+M V V + +LEDA L+L
Sbjct: 54 EASPSK--------ATSLSIYEMNYLLNKTKIK---DVMIRDVVTVSQFASLEDATYLML 102
Query: 205 ETKYRRLPVVD 215
+ K LPVVD
Sbjct: 103 KNKIGILPVVD 113
>gi|325959812|ref|YP_004291278.1| major facilitator superfamily protein [Methanobacterium sp. AL-21]
gi|325331244|gb|ADZ10306.1| major facilitator superfamily MFS_1 [Methanobacterium sp. AL-21]
Length = 559
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 68/149 (45%), Gaps = 23/149 (15%)
Query: 78 PSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL 137
P V DFM + L VK +T+ E L++ + RI G PV+D L+G+VSD D+
Sbjct: 402 PEKRTLIVKDFMVS--NLISVKLDSTILELLKLFTKYRIGGAPVLDSQKNLIGMVSDGDI 459
Query: 138 LALDSISGSGRADNSMFPEVDSTWKTFNEV--------QKLLSKTNGKMVGDLMTPAPVV 189
+ + P+ S EV Q +L++ V D+M +
Sbjct: 460 I------------RYLAPKEGSVHDFIYEVLVEDEENEQDVLNERINATVEDVMEKKQIY 507
Query: 190 -VRETTNLEDAARLLLETKYRRLPVVDAD 217
V+E E A R+L +++LPV+D++
Sbjct: 508 TVKEEDTFERAIRILSHHHFKKLPVLDSN 536
>gi|168486753|ref|ZP_02711261.1| AcuB family protein [Streptococcus pneumoniae CDC1087-00]
gi|418184520|ref|ZP_12821068.1| CBS domain pair family protein [Streptococcus pneumoniae GA47283]
gi|418193391|ref|ZP_12829884.1| CBS domain pair family protein [Streptococcus pneumoniae GA47439]
gi|419510085|ref|ZP_14049729.1| CBS domain protein [Streptococcus pneumoniae NP141]
gi|419529862|ref|ZP_14069393.1| CBS domain protein [Streptococcus pneumoniae GA40028]
gi|421212754|ref|ZP_15669716.1| CBS domain pair family protein [Streptococcus pneumoniae 2070108]
gi|421214942|ref|ZP_15671873.1| CBS domain pair family protein [Streptococcus pneumoniae 2070109]
gi|183570232|gb|EDT90760.1| AcuB family protein [Streptococcus pneumoniae CDC1087-00]
gi|353852118|gb|EHE32108.1| CBS domain pair family protein [Streptococcus pneumoniae GA47283]
gi|353860114|gb|EHE40061.1| CBS domain pair family protein [Streptococcus pneumoniae GA47439]
gi|379574602|gb|EHZ39540.1| CBS domain protein [Streptococcus pneumoniae GA40028]
gi|379633278|gb|EHZ97847.1| CBS domain protein [Streptococcus pneumoniae NP141]
gi|395581161|gb|EJG41634.1| CBS domain pair family protein [Streptococcus pneumoniae 2070108]
gi|395582501|gb|EJG42963.1| CBS domain pair family protein [Streptococcus pneumoniae 2070109]
Length = 218
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 68/131 (51%), Gaps = 20/131 (15%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT K + + P TTV A +++ E+ + PVI++D +LVGLV++ +
Sbjct: 3 VKDFMTRK--VVYISPDTTVSHAADLMREQELHRLPVIEND-QLVGLVTEGTI------- 52
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+A S +T + E+ LL+KT V D+M V V +LEDA L+L
Sbjct: 53 --AQASPS-----KATSLSIYEMNYLLNKTK---VKDVMIRDVVTVSGYASLEDATYLML 102
Query: 205 ETKYRRLPVVD 215
+ K LPVVD
Sbjct: 103 KNKIGILPVVD 113
>gi|195952569|ref|YP_002120859.1| inosine-5'-monophosphate dehydrogenase [Hydrogenobaculum sp.
Y04AAS1]
gi|195932181|gb|ACG56881.1| inosine-5'-monophosphate dehydrogenase [Hydrogenobaculum sp.
Y04AAS1]
Length = 489
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 58/121 (47%), Gaps = 29/121 (23%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
+K T TV EA +++ + +I+G PV+DDD KL+G++++ DL + + F +
Sbjct: 101 IKSTDTVQEAKKLMDKYKISGLPVVDDDGKLIGILTNRDLRFV---------KHQDFSKP 151
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
S + T + + +E +LEDA +L K +LP+VD +
Sbjct: 152 ISMFMTSKNL--------------------ITAKEGISLEDATEILRAHKIEKLPIVDDE 191
Query: 218 G 218
G
Sbjct: 192 G 192
>gi|149003370|ref|ZP_01828259.1| hypothetical protein CGSSp14BS69_05177 [Streptococcus pneumoniae
SP14-BS69]
gi|237650403|ref|ZP_04524655.1| acetoin utilization protein AcuB, putative [Streptococcus
pneumoniae CCRI 1974]
gi|237822483|ref|ZP_04598328.1| acetoin utilization protein AcuB, putative [Streptococcus
pneumoniae CCRI 1974M2]
gi|418125359|ref|ZP_12762275.1| CBS domain pair family protein [Streptococcus pneumoniae GA44511]
gi|418143565|ref|ZP_12780365.1| CBS domain pair family protein [Streptococcus pneumoniae GA13494]
gi|418191302|ref|ZP_12827806.1| CBS domain pair family protein [Streptococcus pneumoniae GA47388]
gi|418213924|ref|ZP_12840659.1| CBS domain pair family protein [Streptococcus pneumoniae GA54644]
gi|419457126|ref|ZP_13997072.1| CBS domain protein [Streptococcus pneumoniae GA02254]
gi|419484381|ref|ZP_14024157.1| CBS domain protein [Streptococcus pneumoniae GA43257]
gi|421300607|ref|ZP_15751278.1| CBS domain pair family protein [Streptococcus pneumoniae GA19998]
gi|147758553|gb|EDK65551.1| hypothetical protein CGSSp14BS69_05177 [Streptococcus pneumoniae
SP14-BS69]
gi|353799403|gb|EHD79722.1| CBS domain pair family protein [Streptococcus pneumoniae GA44511]
gi|353809306|gb|EHD89566.1| CBS domain pair family protein [Streptococcus pneumoniae GA13494]
gi|353857203|gb|EHE37166.1| CBS domain pair family protein [Streptococcus pneumoniae GA47388]
gi|353871207|gb|EHE51078.1| CBS domain pair family protein [Streptococcus pneumoniae GA54644]
gi|379532612|gb|EHY97837.1| CBS domain protein [Streptococcus pneumoniae GA02254]
gi|379583892|gb|EHZ48769.1| CBS domain protein [Streptococcus pneumoniae GA43257]
gi|395900031|gb|EJH10970.1| CBS domain pair family protein [Streptococcus pneumoniae GA19998]
Length = 218
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 68/131 (51%), Gaps = 20/131 (15%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT K + + P TTV A +++ E+ + PVI++D +LVGLV++ +
Sbjct: 3 VKDFMTRK--VVYISPDTTVSHAADLMREQELHRLPVIEND-QLVGLVTEGTI------- 52
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+A S +T + E+ LL+KT V D+M V V +LEDA L+L
Sbjct: 53 --AQASPS-----KATSLSIYEMNYLLNKTK---VKDVMIRDVVTVSGYASLEDATYLML 102
Query: 205 ETKYRRLPVVD 215
+ K LPVVD
Sbjct: 103 KNKIGILPVVD 113
>gi|148270727|ref|YP_001245187.1| CBS domain-containing protein [Thermotoga petrophila RKU-1]
gi|281413032|ref|YP_003347111.1| hypothetical protein Tnap_1625 [Thermotoga naphthophila RKU-10]
gi|147736271|gb|ABQ47611.1| CBS domain containing protein [Thermotoga petrophila RKU-1]
gi|281374135|gb|ADA67697.1| CBS domain containing protein [Thermotoga naphthophila RKU-10]
Length = 215
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 67/134 (50%), Gaps = 20/134 (14%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT + P T+ EAL+++ + +I V+ D+ K+VG+V++ DLL +
Sbjct: 3 VKDFMTRNP--ITIAPETSFSEALKLMKQNKIKRLIVMKDE-KIVGIVTEKDLLY----A 55
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+A + W E+ LLSK + ++MT V V E +EDAAR++
Sbjct: 56 SPSKATTL------NIW----ELHYLLSKLK---IEEIMTKNVVTVNENAPIEDAARIME 102
Query: 205 ETKYRRLPVVDADG 218
E LPVVD G
Sbjct: 103 EKDISGLPVVDDAG 116
>gi|55822341|ref|YP_140782.1| acetoin utilization protein, truncated, partial [Streptococcus
thermophilus CNRZ1066]
gi|55738326|gb|AAV61967.1| acetoin utilization protein, truncated [Streptococcus thermophilus
CNRZ1066]
Length = 139
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 62/120 (51%), Gaps = 18/120 (15%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P TTV A +I+ +K + PVI+ D KLVGL+++ + S S S++
Sbjct: 8 VSPETTVATAADIIRDKGLRCLPVIEHD-KLVGLITEG---TMAEASPSKATSLSIY--- 60
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
E+ LL+KT VGD+M + V + +LEDA ++L+ K LPVVD D
Sbjct: 61 --------EMNYLLNKTK---VGDIMIKNVLTVSKYASLEDAICIMLQNKVGVLPVVDND 109
>gi|209544346|ref|YP_002276575.1| putative signal transduction protein with CBS domains
[Gluconacetobacter diazotrophicus PAl 5]
gi|209532023|gb|ACI51960.1| putative signal transduction protein with CBS domains
[Gluconacetobacter diazotrophicus PAl 5]
Length = 236
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 68/121 (56%), Gaps = 11/121 (9%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL---ALDSISGSGRADNSMF 154
V+ T ++ +A+ +++ R++ PV+ ++ LVG+V++ DL+ L++ SG G + +F
Sbjct: 14 VESTRSLADAIGLMLTNRVSALPVVTENGLLVGVVTEGDLMRRSELETRSGHGWLGD-LF 72
Query: 155 PEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVV 214
S+ + +E ++G+ V D+M+ PV V T L DA +LL R LPVV
Sbjct: 73 ---RSSGRQASE----YVHSHGRKVFDIMSDQPVSVEPGTVLRDAVEVLLLRNIRHLPVV 125
Query: 215 D 215
+
Sbjct: 126 E 126
>gi|149010620|ref|ZP_01831991.1| acetoin utilization protein AcuB, putative [Streptococcus
pneumoniae SP19-BS75]
gi|418166367|ref|ZP_12803023.1| CBS domain pair family protein [Streptococcus pneumoniae GA17971]
gi|418188980|ref|ZP_12825495.1| CBS domain pair family protein [Streptococcus pneumoniae GA47373]
gi|419442244|ref|ZP_13982275.1| CBS domain protein [Streptococcus pneumoniae GA13224]
gi|421210706|ref|ZP_15667694.1| CBS domain pair family protein [Streptococcus pneumoniae 2070035]
gi|421231520|ref|ZP_15688167.1| CBS domain pair family protein [Streptococcus pneumoniae 2080076]
gi|147765101|gb|EDK72030.1| acetoin utilization protein AcuB, putative [Streptococcus
pneumoniae SP19-BS75]
gi|353829963|gb|EHE10093.1| CBS domain pair family protein [Streptococcus pneumoniae GA17971]
gi|353856122|gb|EHE36091.1| CBS domain pair family protein [Streptococcus pneumoniae GA47373]
gi|379554211|gb|EHZ19291.1| CBS domain protein [Streptococcus pneumoniae GA13224]
gi|395574579|gb|EJG35156.1| CBS domain pair family protein [Streptococcus pneumoniae 2070035]
gi|395596619|gb|EJG56835.1| CBS domain pair family protein [Streptococcus pneumoniae 2080076]
Length = 218
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 68/131 (51%), Gaps = 20/131 (15%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT K + + P TTV A +++ E+ + PVI++D +LVGLV++ +
Sbjct: 3 VKDFMTRK--VVYISPDTTVSHAADLMREQELHRLPVIEND-QLVGLVTEGTI------- 52
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+A S +T + E+ LL+KT V D+M V V +LEDA L+L
Sbjct: 53 --AQASPS-----KATSLSIYEMNYLLNKTK---VKDVMIRDVVTVSGYASLEDATYLML 102
Query: 205 ETKYRRLPVVD 215
+ K LPVVD
Sbjct: 103 KNKIGILPVVD 113
>gi|52632001|gb|AAU85401.1| inosine-5'-monophosphate dehydrogenase [uncultured archaeon
GZfos12E1]
Length = 187
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 62/111 (55%), Gaps = 6/111 (5%)
Query: 110 ILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDST---WKTFNE 166
+L E +I G PV+++ ++VG++S+ D+L L + S+F D + ++
Sbjct: 61 VLKENKIAGVPVLNEREEVVGVISEADVLKL---LENFHWYTSIFTAHDLMNIFGEDLHD 117
Query: 167 VQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
VQ+ + K + V D+M+ P V T ++DAA+++ T + RLPVVD +
Sbjct: 118 VQQDIEKASKMKVKDVMSKKPETVPPDTLIDDAAQIMHSTGFNRLPVVDEN 168
>gi|393796945|ref|ZP_10380309.1| inosine-5'-monophosphate dehydrogenase, partial [Candidatus
Nitrosoarchaeum limnia BG20]
Length = 163
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 70/164 (42%), Gaps = 49/164 (29%)
Query: 73 ANSAAPSSGVYTVGDFMTTKEEL-----------------HVVKPTTTVDEALEILVEKR 115
A + A + G+ + F+T KE+ + + TV A+ EK
Sbjct: 2 AVAMARAGGIGIIHRFLTIKEQANEVLKVKRSGSVMIENPYAISFDKTVQYAINYAEEKE 61
Query: 116 ITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTN 175
I+G VID + KLVG+V+D DLL E DST
Sbjct: 62 ISGLLVIDSNSKLVGIVTDRDLLF----------------ETDST--------------- 90
Query: 176 GKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGW 219
+++ D+MT V + +L++A ++L + + +LP+VD G+
Sbjct: 91 -RLIKDVMTKDVVTAKLGVSLDEAKKILHKHRIEKLPIVDDSGF 133
>gi|424819403|ref|ZP_18244503.1| Malate dehydrogenase [Candidatus Parvarchaeum acidiphilum
ARMAN-4_'5-way FS']
gi|326422420|gb|EGD71821.1| Malate dehydrogenase [Candidatus Parvarchaeum acidiphilum
ARMAN-4_'5-way FS']
Length = 462
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 57/126 (45%), Gaps = 33/126 (26%)
Query: 93 EELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNS 152
E+ +VV T++E ++ EK++T FPV+D KL+G+++ D
Sbjct: 95 EKPYVVGKDFTIEELRNLVTEKKVTSFPVVDK-GKLIGIITRRDF--------------- 138
Query: 153 MFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLP 212
F E QK K V +LMT + + L DA +L+ + K +LP
Sbjct: 139 ----------EFEENQK-------KKVNELMTKDVITAHKGIPLNDAKQLMYKNKIEKLP 181
Query: 213 VVDADG 218
+VD +G
Sbjct: 182 LVDKEG 187
>gi|15902708|ref|NP_358258.1| acetoin utilization protein AcuB, [Streptococcus pneumoniae R6]
gi|116516866|ref|YP_816151.1| acetoin utilization protein AcuB [Streptococcus pneumoniae D39]
gi|148992416|ref|ZP_01822111.1| hypothetical protein CGSSp9BS68_08357 [Streptococcus pneumoniae
SP9-BS68]
gi|168488422|ref|ZP_02712621.1| AcuB family protein [Streptococcus pneumoniae SP195]
gi|182683674|ref|YP_001835421.1| acetoin utilization protein AcuB [Streptococcus pneumoniae CGSP14]
gi|303255831|ref|ZP_07341872.1| acetoin utilization protein AcuB, putative [Streptococcus
pneumoniae BS455]
gi|387759012|ref|YP_006065990.1| hypothetical protein SPNINV200_06660 [Streptococcus pneumoniae
INV200]
gi|417678741|ref|ZP_12328138.1| CBS domain pair family protein [Streptococcus pneumoniae GA17570]
gi|418199711|ref|ZP_12836158.1| CBS domain pair family protein [Streptococcus pneumoniae GA47976]
gi|418233945|ref|ZP_12860525.1| CBS domain pair family protein [Streptococcus pneumoniae GA08780]
gi|419495050|ref|ZP_14034770.1| CBS domain protein [Streptococcus pneumoniae GA47461]
gi|419507819|ref|ZP_14047473.1| CBS domain protein [Streptococcus pneumoniae GA49542]
gi|419514310|ref|ZP_14053938.1| CBS domain protein [Streptococcus pneumoniae England14-9]
gi|419523033|ref|ZP_14062614.1| CBS domain protein [Streptococcus pneumoniae GA13723]
gi|421217247|ref|ZP_15674148.1| CBS domain pair family protein [Streptococcus pneumoniae 2070335]
gi|421219938|ref|ZP_15676793.1| CBS domain pair family protein [Streptococcus pneumoniae 2070425]
gi|421222269|ref|ZP_15679063.1| CBS domain pair family protein [Streptococcus pneumoniae 2070531]
gi|421265784|ref|ZP_15716667.1| CBS domain protein [Streptococcus pneumoniae SPAR27]
gi|421267958|ref|ZP_15718830.1| CBS domain protein [Streptococcus pneumoniae SPAR95]
gi|421278519|ref|ZP_15729329.1| CBS domain protein [Streptococcus pneumoniae GA17301]
gi|421293643|ref|ZP_15744367.1| CBS domain pair family protein [Streptococcus pneumoniae GA56113]
gi|421302564|ref|ZP_15753229.1| CBS domain pair family protein [Streptococcus pneumoniae GA17484]
gi|15458251|gb|AAK99468.1| Conserved hypothetical protein [Streptococcus pneumoniae R6]
gi|116077442|gb|ABJ55162.1| acetoin utilization protein AcuB, putative [Streptococcus
pneumoniae D39]
gi|147928733|gb|EDK79746.1| hypothetical protein CGSSp9BS68_08357 [Streptococcus pneumoniae
SP9-BS68]
gi|182629008|gb|ACB89956.1| acetoin utilization protein AcuB, putative [Streptococcus
pneumoniae CGSP14]
gi|183573030|gb|EDT93558.1| AcuB family protein [Streptococcus pneumoniae SP195]
gi|301801601|emb|CBW34299.1| conserved hypothetical protein [Streptococcus pneumoniae INV200]
gi|302597215|gb|EFL64320.1| acetoin utilization protein AcuB, putative [Streptococcus
pneumoniae BS455]
gi|332073120|gb|EGI83599.1| CBS domain pair family protein [Streptococcus pneumoniae GA17570]
gi|353866389|gb|EHE46291.1| CBS domain pair family protein [Streptococcus pneumoniae GA47976]
gi|353889384|gb|EHE69155.1| CBS domain pair family protein [Streptococcus pneumoniae GA08780]
gi|379558572|gb|EHZ23605.1| CBS domain protein [Streptococcus pneumoniae GA13723]
gi|379597414|gb|EHZ62217.1| CBS domain protein [Streptococcus pneumoniae GA47461]
gi|379612664|gb|EHZ77381.1| CBS domain protein [Streptococcus pneumoniae GA49542]
gi|379638800|gb|EIA03345.1| CBS domain protein [Streptococcus pneumoniae England14-9]
gi|395584733|gb|EJG45125.1| CBS domain pair family protein [Streptococcus pneumoniae 2070335]
gi|395589593|gb|EJG49911.1| CBS domain pair family protein [Streptococcus pneumoniae 2070531]
gi|395590013|gb|EJG50328.1| CBS domain pair family protein [Streptococcus pneumoniae 2070425]
gi|395868520|gb|EJG79637.1| CBS domain protein [Streptococcus pneumoniae SPAR27]
gi|395871382|gb|EJG82488.1| CBS domain protein [Streptococcus pneumoniae SPAR95]
gi|395881891|gb|EJG92939.1| CBS domain protein [Streptococcus pneumoniae GA17301]
gi|395894975|gb|EJH05951.1| CBS domain pair family protein [Streptococcus pneumoniae GA56113]
gi|395903378|gb|EJH14310.1| CBS domain pair family protein [Streptococcus pneumoniae GA17484]
Length = 218
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 68/131 (51%), Gaps = 20/131 (15%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT K + + P TTV A +++ E+ + PVI++D +LVGLV++ +
Sbjct: 3 VKDFMTRK--VVYISPDTTVSHAADLMREQELHRLPVIEND-QLVGLVTEGTI------- 52
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+A S +T + E+ LL+KT V D+M V V +LEDA L+L
Sbjct: 53 --AQASPS-----KATSLSIYEMNYLLNKTK---VKDVMIRDVVTVSGYASLEDATYLML 102
Query: 205 ETKYRRLPVVD 215
+ K LPVVD
Sbjct: 103 KNKIGILPVVD 113
>gi|359400359|ref|ZP_09193343.1| hypothetical protein NSU_3029 [Novosphingobium pentaromativorans
US6-1]
gi|357598219|gb|EHJ59953.1| hypothetical protein NSU_3029 [Novosphingobium pentaromativorans
US6-1]
Length = 237
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 58/123 (47%), Gaps = 11/123 (8%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P T+V E +L+E+ I+ PVI D +L G+VS+ DLL R ++ P
Sbjct: 15 VTPETSVPEVARLLLERHISAVPVIGSDGQLAGIVSEGDLLR--------RTEDGSHPHG 66
Query: 158 DSTWKTFNEVQKLLS---KTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVV 214
+ F++ + K G+ D+MT V V E + A LL + +R+PV+
Sbjct: 67 SWWLRHFSKRGASAADYVKARGRFAADVMTRDVVTVTEEALSSEVAHLLESRRIKRVPVL 126
Query: 215 DAD 217
D
Sbjct: 127 RED 129
>gi|385260148|ref|ZP_10038297.1| CBS domain protein [Streptococcus sp. SK140]
gi|385192068|gb|EIF39478.1| CBS domain protein [Streptococcus sp. SK140]
Length = 218
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 72/137 (52%), Gaps = 21/137 (15%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT K + + P TTV A +++ E+ + PVI++D KLVGLV++ +
Sbjct: 3 VKDFMTRK--VVYISPDTTVAHAADLMREQGLHRLPVIEND-KLVGLVTEGTI------- 52
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
A+ S P ++ F E+ LL+KT V D+M V V +LEDA L+L
Sbjct: 53 ----AEAS--PSKATSLSIF-EMNYLLNKTK---VKDVMIRDVVTVSGYASLEDATYLML 102
Query: 205 ETKYRRLPVVDADGWNY 221
+ K LPV+D +G Y
Sbjct: 103 KNKIGILPVID-NGQVY 118
>gi|269126276|ref|YP_003299646.1| CBS domain containing membrane protein [Thermomonospora curvata DSM
43183]
gi|268311234|gb|ACY97608.1| CBS domain containing membrane protein [Thermomonospora curvata DSM
43183]
Length = 227
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 61/134 (45%), Gaps = 10/134 (7%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V + MT E + V+ T E +E++ E RI PV+D D +++G+VS+ DLL
Sbjct: 6 VQELMT--ENVVSVRAETPFVEIVELIEEHRIDAVPVVDADRRVIGIVSESDLLHKQEFG 63
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
G R + + + ++ +K LMT + V +AAR++
Sbjct: 64 GPRRTPSGLLGALRR--------RRAQAKAGAVNARGLMTTPVITVSPQATAAEAARIMA 115
Query: 205 ETKYRRLPVVDADG 218
K +LPV D DG
Sbjct: 116 RHKVDQLPVTDDDG 129
Score = 40.4 bits (93), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Query: 69 GTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKL 128
G L A +G MTT + V P T EA I+ ++ PV DDD +L
Sbjct: 74 GALRRRRAQAKAGAVNARGLMTTP--VITVSPQATAAEAARIMARHKVDQLPVTDDDGRL 131
Query: 129 VGLVSDYDLL 138
VG+V+ D+L
Sbjct: 132 VGIVARSDVL 141
>gi|386819034|ref|ZP_10106250.1| putative transcriptional regulator, contains C-terminal CBS domains
[Joostella marina DSM 19592]
gi|386424140|gb|EIJ37970.1| putative transcriptional regulator, contains C-terminal CBS domains
[Joostella marina DSM 19592]
Length = 153
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 63/131 (48%), Gaps = 25/131 (19%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D+MT + L + KP ++ E +E+ ++ RI+G PV D++ LVG++S+ D + IS
Sbjct: 23 VEDYMT--KNLVLFKPDQSILEVMELFLKHRISGGPVCDENGHLVGIISEAD--CMKQIS 78
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
S + FN +L K V + MT + N+ DAA
Sbjct: 79 ES---------------RYFN--MPILDKN----VENFMTRDVETIPHDMNIFDAASRFY 117
Query: 205 ETKYRRLPVVD 215
+ RRLPV+D
Sbjct: 118 KGHRRRLPVMD 128
>gi|148655070|ref|YP_001275275.1| hypothetical protein RoseRS_0916 [Roseiflexus sp. RS-1]
gi|148567180|gb|ABQ89325.1| CBS domain containing protein [Roseiflexus sp. RS-1]
Length = 225
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 69/134 (51%), Gaps = 21/134 (15%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D+M+T V+ PT T+ EA ++ ++RI P++++ KL G+++ DL
Sbjct: 6 VADWMSTPAI--VIAPTATLAEAQRLMEQRRIRRLPIVENG-KLAGIITRGDL------- 55
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
S P VD+T ++ E + LL + V + MT + + + DAARL+L
Sbjct: 56 ------RSAQP-VDTTL-SYYEWRALLDRVT---VAECMTRHVITITPDASTLDAARLML 104
Query: 205 ETKYRRLPVVDADG 218
+ K LPVVD +G
Sbjct: 105 KHKIGGLPVVDDEG 118
Score = 38.5 bits (88), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TV + MT + + P + +A ++++ +I G PV+DD+ ++VG++++ DL L
Sbjct: 78 TVAECMT--RHVITITPDASTLDAARLMLKHKIGGLPVVDDEGRVVGIITESDLFRLQIA 135
Query: 144 SGSG 147
+G
Sbjct: 136 LATG 139
>gi|386586288|ref|YP_006082690.1| putative signal transduction protein [Streptococcus suis D12]
gi|353738434|gb|AER19442.1| putative signal transduction protein with CBS domains
[Streptococcus suis D12]
gi|451937306|gb|AGF87609.1| CBS family protein [Streptococcus phage phiD12]
Length = 218
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 69/132 (52%), Gaps = 20/132 (15%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
+V DFMT K + + P TT+ A +I+ E+ + PVI++D KLVGLV++ +I
Sbjct: 2 SVKDFMTRK--VVYISPDTTIAHAADIMREQYLHRLPVIEND-KLVGLVTE------GTI 52
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
+ + + +T + E+ LL+KT V D+M + V +LEDA L+
Sbjct: 53 AEASPSK--------ATSLSIYEMNYLLNKTK---VKDVMIKNVITVSGYASLEDATYLM 101
Query: 204 LETKYRRLPVVD 215
+ K LPVVD
Sbjct: 102 YKNKVGILPVVD 113
>gi|220905178|ref|YP_002480490.1| hypothetical protein Ddes_1916 [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
gi|219869477|gb|ACL49812.1| CBS domain containing membrane protein [Desulfovibrio desulfuricans
subsp. desulfuricans str. ATCC 27774]
Length = 219
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 38/50 (76%), Gaps = 1/50 (2%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL-ALDSISGS 146
VKP+ TV++A I+++ +I G PV++D KLVG++SD+D+ AL I+G+
Sbjct: 89 VKPSDTVEQAALIMLDNKIGGLPVVEDSGKLVGIISDHDVFKALVDITGA 138
Score = 45.8 bits (107), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 71/134 (52%), Gaps = 19/134 (14%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V ++MTT ++ V P T++ + +++ + + PV+DD ++VG++SD D+
Sbjct: 3 VQNWMTT--DVVSVTPETSLLKVGKLMKDHHVRRLPVLDDKGRVVGIISDRDV------- 53
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
D S P +T + E+ LL++ K ++MT P+ V+ + +E AA ++L
Sbjct: 54 ----RDAS--PSKATTLDMY-EMHYLLAELKAK---NIMTANPMTVKPSDTVEQAALIML 103
Query: 205 ETKYRRLPVVDADG 218
+ K LPVV+ G
Sbjct: 104 DNKIGGLPVVEDSG 117
>gi|449137048|ref|ZP_21772381.1| CBS domain-containing protein [Rhodopirellula europaea 6C]
gi|448884323|gb|EMB14823.1| CBS domain-containing protein [Rhodopirellula europaea 6C]
Length = 156
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 54/124 (43%), Gaps = 25/124 (20%)
Query: 95 LHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMF 154
L + P EAL++L+ +RI+G PV+D+D G+ S+ + + G +
Sbjct: 14 LITLSPKMDALEALDVLLRQRISGAPVVDEDGHFAGVFSEKSCMKF--VVGMAYENLPSI 71
Query: 155 PEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVV 214
P VGDL P + E T+L A+ L+ RRLPV+
Sbjct: 72 P-----------------------VGDLTDKNPPTISEETDLLTIAQTFLDAACRRLPVL 108
Query: 215 DADG 218
D+DG
Sbjct: 109 DSDG 112
>gi|15643897|ref|NP_228946.1| hypothetical protein TM1140 [Thermotoga maritima MSB8]
gi|418044700|ref|ZP_12682796.1| CBS domain containing protein [Thermotoga maritima MSB8]
gi|4981687|gb|AAD36216.1|AE001771_9 conserved hypothetical protein [Thermotoga maritima MSB8]
gi|351677782|gb|EHA60929.1| CBS domain containing protein [Thermotoga maritima MSB8]
Length = 215
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 68/134 (50%), Gaps = 20/134 (14%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT + P T+ EAL+++ + +I V+ ++ K+VG+V++ DLL +
Sbjct: 3 VKDFMTRNP--ITIAPETSFSEALKLMKQNKIKRLIVMKNE-KIVGIVTEKDLLY----A 55
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+A + W E+ LLSK + ++MT V V E T +EDAAR++
Sbjct: 56 SPSKATTL------NIW----ELHYLLSKLK---IEEIMTKDVVTVNENTPIEDAARIME 102
Query: 205 ETKYRRLPVVDADG 218
E LPVVD G
Sbjct: 103 EKDISGLPVVDDAG 116
Score = 37.4 bits (85), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL-ALDSISGSGR 148
V T +++A I+ EK I+G PV+DD +LVG+++ D+ I G+ R
Sbjct: 88 VNENTPIEDAARIMEEKDISGLPVVDDAGRLVGIITQTDIFKVFVEIFGTKR 139
>gi|317482260|ref|ZP_07941281.1| H+ antiporter-1 family protein [Bifidobacterium sp. 12_1_47BFAA]
gi|316916276|gb|EFV37677.1| H+ antiporter-1 family protein [Bifidobacterium sp. 12_1_47BFAA]
Length = 683
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 57/110 (51%), Gaps = 6/110 (5%)
Query: 111 LVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNE--VQ 168
+ ++ PV++ D +LVG VSD D++ S + ++ ST F++ V
Sbjct: 553 FIRLNVSSLPVVNGDGRLVGFVSDGDVMK----SIATYESRTVSTGTGSTMVVFDDETVA 608
Query: 169 KLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADG 218
+ +GK V D+ T V ++ + AR+L + ++++LPVVDADG
Sbjct: 609 SKVQALSGKKVMDIATRKVVAATPDQHVGEVARILAKKQFKKLPVVDADG 658
>gi|403253876|ref|ZP_10920176.1| CBS domain-containing protein [Thermotoga sp. EMP]
gi|402810779|gb|EJX25268.1| CBS domain-containing protein [Thermotoga sp. EMP]
Length = 215
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 68/134 (50%), Gaps = 20/134 (14%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT + P T+ EAL+++ + +I V+ ++ K+VG+V++ DLL +
Sbjct: 3 VKDFMTRNP--ITIAPETSFSEALKLMKQNKIKRLIVMKNE-KIVGIVTEKDLLY----A 55
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+A + W E+ LLSK + ++MT V V E T +EDAAR++
Sbjct: 56 SPSKATTL------NIW----ELHYLLSKLK---IEEIMTKDVVTVNENTPIEDAARIME 102
Query: 205 ETKYRRLPVVDADG 218
E LPVVD G
Sbjct: 103 EKDISGLPVVDDAG 116
Score = 36.6 bits (83), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL-ALDSISGSGR 148
V T +++A I+ EK I+G PV+DD LVG+++ D+ I G+ R
Sbjct: 88 VNENTPIEDAARIMEEKDISGLPVVDDAGHLVGIITQTDIFKVFVEIFGTKR 139
>gi|418965274|ref|ZP_13517052.1| CBS domain protein [Streptococcus constellatus subsp. constellatus
SK53]
gi|383342869|gb|EID21070.1| CBS domain protein [Streptococcus constellatus subsp. constellatus
SK53]
Length = 218
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 70/131 (53%), Gaps = 20/131 (15%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT K + + P TTV A +I+ E+ + PVI++D +LVGLV++ +I+
Sbjct: 3 VKDFMTRK--VVYISPDTTVAHAADIMREQGLHRLPVIEND-QLVGLVTE------GTIA 53
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+ + +T + E+ LL+KT K D+M V V + +LEDA L+L
Sbjct: 54 EASPSK--------ATSLSIYEMNYLLNKTKIK---DVMIRDVVTVSQFASLEDATYLML 102
Query: 205 ETKYRRLPVVD 215
+ K LPVVD
Sbjct: 103 KNKIGILPVVD 113
>gi|116753803|ref|YP_842921.1| signal transduction protein [Methanosaeta thermophila PT]
gi|116665254|gb|ABK14281.1| putative signal transduction protein with CBS domains [Methanosaeta
thermophila PT]
Length = 158
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 64/123 (52%), Gaps = 16/123 (13%)
Query: 104 VDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKT 163
+ EA +L E RI+G PV+D D +LVG++S+ DLL L S D+ + S ++
Sbjct: 20 IAEAARLLRENRISGMPVLDGD-ELVGVISESDLLRLLSTE-----DDRGGLWLPSPFEI 73
Query: 164 FN----------EVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPV 213
F +++ L + V D+M+ P+ V ++E+AA ++ + + RLPV
Sbjct: 74 FEIPVRDVIRWERMKRSLDEITKMRVADVMSRKPITVSPDASIEEAAAIMTKHRINRLPV 133
Query: 214 VDA 216
V+
Sbjct: 134 VEG 136
>gi|329938565|ref|ZP_08287990.1| hypothetical protein SGM_3482 [Streptomyces griseoaurantiacus M045]
gi|329302538|gb|EGG46429.1| hypothetical protein SGM_3482 [Streptomyces griseoaurantiacus M045]
Length = 219
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 67/140 (47%), Gaps = 17/140 (12%)
Query: 81 GVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLAL 140
G +TV D MT V + + ++ E +++ PV++ + ++VG+VS+ DLL
Sbjct: 3 GPHTVSDVMT--HTAVAVGRDAPFKDIVTLMQEWKVSALPVLEGEGRVVGVVSEADLLLK 60
Query: 141 DSISGSGRADNSMFPEVDSTWKTFNEVQKL--LSKTNGKMVGDLMTPAPVVVRETTNLED 198
+ DS ++++L L+K D+MT V V L +
Sbjct: 61 EEFR-------------DSDPDRLTQLRRLPDLAKAGALTAADVMTAPAVTVHPGATLGE 107
Query: 199 AARLLLETKYRRLPVVDADG 218
AAR++ + +RLPVV+A+G
Sbjct: 108 AARIMARRRVKRLPVVNAEG 127
Score = 37.0 bits (84), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 40/85 (47%), Gaps = 14/85 (16%)
Query: 54 DRVSALRRSSAVFASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVE 113
DR++ LRR + +G LTA D MT V P T+ EA I+
Sbjct: 69 DRLTQLRRLPDLAKAGALTA------------ADVMTAPA--VTVHPGATLGEAARIMAR 114
Query: 114 KRITGFPVIDDDWKLVGLVSDYDLL 138
+R+ PV++ + L G+VS DLL
Sbjct: 115 RRVKRLPVVNAEGILEGVVSRADLL 139
>gi|313204351|ref|YP_004043008.1| inosine-5'-monophosphate dehydrogenase [Paludibacter
propionicigenes WB4]
gi|312443667|gb|ADQ80023.1| inosine-5'-monophosphate dehydrogenase [Paludibacter
propionicigenes WB4]
Length = 492
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 59/120 (49%), Gaps = 31/120 (25%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
++ TV +AL ++ E +I G PV+D+ LVG+V++ DL R M EV
Sbjct: 104 IRKGATVGDALALMAEYKIGGIPVVDEQGYLVGIVTNRDL----------RFQRDMDKEV 153
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
D+ +++K N L+T +T+LE AA +L + K +LPVVD +
Sbjct: 154 DA----------IMTKEN------LITTT-----RSTDLEAAADILQQFKIEKLPVVDEN 192
Score = 36.6 bits (83), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 32/51 (62%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL 137
D + TKE L +T ++ A +IL + +I PV+D++ KLVGL++ D+
Sbjct: 154 DAIMTKENLITTTRSTDLEAAADILQQFKIEKLPVVDENNKLVGLLTYKDI 204
>gi|298674088|ref|YP_003725838.1| hypothetical protein Metev_0111 [Methanohalobium evestigatum
Z-7303]
gi|298287076|gb|ADI73042.1| CBS domain containing protein [Methanohalobium evestigatum Z-7303]
Length = 284
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 56/113 (49%), Gaps = 34/113 (30%)
Query: 105 DEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTF 164
+E LEIL +K+++G PVI ++ K+VG+VS +LL +PE
Sbjct: 25 EEVLEILKDKQVSGVPVIKEN-KVVGIVSRNNLLK--------------YPE-------- 61
Query: 165 NEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
E Q L LMT PV + ++ AARLLL+ RRLPVVD D
Sbjct: 62 -EEQLAL----------LMTRDPVTISPDVDITVAARLLLDHDVRRLPVVDGD 103
>gi|385675834|ref|ZP_10049762.1| CBS domain containing membrane protein [Amycolatopsis sp. ATCC
39116]
Length = 221
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 64/135 (47%), Gaps = 11/135 (8%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
VGD MT + V P + +L + +I PV+D + VG+VS+ DLLA + +
Sbjct: 5 VVGDLMT--HPVVSVVPAMPFKNLVRLLDQYQIGAVPVVDGHDRRVGVVSESDLLAKEDL 62
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
G+ R ++ P W+ + + + + ++T MT V+ + + AAR L
Sbjct: 63 RGADRPPSAFAP--GRRWRWWGKSRAMTAETA-------MTRRVRVIGQDEPVAVAARRL 113
Query: 204 LETKYRRLPVVDADG 218
RRL VVD DG
Sbjct: 114 AREHLRRLYVVDGDG 128
>gi|84616861|emb|CAJ13755.1| conserved hypothetical protein [Desulfococcus multivorans]
Length = 309
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 58/104 (55%), Gaps = 3/104 (2%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL-ALDSI 143
V D MT K + + P TTV+EA E+L++++I+G PV+DD +L+G+++ DL L ++
Sbjct: 155 VSDIMTRK--IITLAPDTTVEEAAEVLLKQKISGAPVVDDAGRLLGVITKSDLFRMLIAL 212
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAP 187
+G +V + E+ + + G++V L++ P
Sbjct: 213 TGLPNRGIQFALKVKNRPDVIPELMAIFGEYEGQLVNVLISHKP 256
Score = 40.4 bits (93), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 64/137 (46%), Gaps = 22/137 (16%)
Query: 86 GDFMTTKEELHVVKPTTTVD----EALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALD 141
GD M K + T +D +A++++ I PV+D + KL G+++D DL
Sbjct: 76 GDLMLVKNWMSRRLITVDIDAAMADAVKLMKTNDIHLLPVLDGE-KLSGIITDRDL---- 130
Query: 142 SISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAAR 201
RA S D+T E+ LLSK V D+MT + + T +E+AA
Sbjct: 131 -----KRASAS-----DATALEMYELIYLLSKIR---VSDIMTRKIITLAPDTTVEEAAE 177
Query: 202 LLLETKYRRLPVVDADG 218
+LL+ K PVVD G
Sbjct: 178 VLLKQKISGAPVVDDAG 194
>gi|407004025|gb|EKE20499.1| IMP dehydrogenase [uncultured bacterium]
Length = 151
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 71/142 (50%), Gaps = 20/142 (14%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D MT +++ V TTV+ +IL ++RI G PV+D D K++G+V++ + A
Sbjct: 3 VKDIMT--KDVIFVFDHTTVNNVADILTKERIHGVPVVDKDRKVIGIVTETNFFA----- 55
Query: 145 GSGRADNSMFPEVDSTWKTFN-----EVQKLLSKTNGKM---VGDLMTPAPVVVRETTNL 196
+ D ++ + KT +V+ L +K K+ VGD+MT V V +
Sbjct: 56 ---KVDGDLY--LSKFVKTIKKNKLPDVRDLKNKNEIKVETTVGDIMTKNCVTVSPEMKV 110
Query: 197 EDAARLLLETKYRRLPVVDADG 218
E+ + + + +PVVD +G
Sbjct: 111 EELFEVFRKKGFHTIPVVDKNG 132
>gi|419847222|ref|ZP_14370405.1| drug resistance MFS transporter, drug:H+ antiporter-2 family
[Bifidobacterium longum subsp. longum 1-6B]
gi|419855291|ref|ZP_14378051.1| drug resistance MFS transporter, drug:H+ antiporter-2 family
[Bifidobacterium longum subsp. longum 44B]
gi|386411373|gb|EIJ26106.1| drug resistance MFS transporter, drug:H+ antiporter-2 family
[Bifidobacterium longum subsp. longum 1-6B]
gi|386415756|gb|EIJ30278.1| drug resistance MFS transporter, drug:H+ antiporter-2 family
[Bifidobacterium longum subsp. longum 44B]
Length = 683
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 57/110 (51%), Gaps = 6/110 (5%)
Query: 111 LVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNE--VQ 168
+ ++ PV++ D +LVG VSD D++ S + ++ ST F++ V
Sbjct: 553 FIRLNVSSLPVVNGDGRLVGFVSDGDVMK----SIATYESRTVSTGTGSTMVVFDDETVA 608
Query: 169 KLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADG 218
+ +GK V D+ T V ++ + AR+L + ++++LPVVDADG
Sbjct: 609 SKVQALSGKKVMDIATRKVVAATPDQHVGEVARILAKKQFKKLPVVDADG 658
>gi|375101298|ref|ZP_09747561.1| CBS-domain-containing membrane protein [Saccharomonospora cyanea
NA-134]
gi|374662030|gb|EHR61908.1| CBS-domain-containing membrane protein [Saccharomonospora cyanea
NA-134]
Length = 201
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 58/115 (50%), Gaps = 18/115 (15%)
Query: 100 PTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDS 159
P +V A +L E T PV+DD ++VG+V++ D++ +GR + D+
Sbjct: 16 PDDSVKRATRLLAEHGFTALPVVDDAGRVVGVVTEADVM-------TGRVPH------DA 62
Query: 160 TWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVV 214
+++ + + VG++MTPAP ++ ++ D LLE +R +PV+
Sbjct: 63 RYRSGSSTGPVAGT-----VGEVMTPAPTCTQQGADVADLVGTLLEGHHRAVPVL 112
>gi|418027868|ref|ZP_12666471.1| Acetoin utilization acuB protein [Streptococcus thermophilus CNCM
I-1630]
gi|354689426|gb|EHE89420.1| Acetoin utilization acuB protein [Streptococcus thermophilus CNCM
I-1630]
Length = 184
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 60/120 (50%), Gaps = 18/120 (15%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P TTV A +I+ +K + PVI+ D KLVGL+++ A S
Sbjct: 8 VSPETTVATAADIIRDKGLRRLPVIEHD-KLVGLITE---------GTMAEASPS----- 52
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
+T E+ LL+KT VGD+M + V + +LEDA ++L+ K LPVVD D
Sbjct: 53 KATSLLIYEMNYLLNKTK---VGDIMIKNVLTVSKYASLEDAIYIMLQNKVGVLPVVDND 109
>gi|320527726|ref|ZP_08028896.1| CBS domain pair protein [Solobacterium moorei F0204]
gi|320131891|gb|EFW24451.1| CBS domain pair protein [Solobacterium moorei F0204]
Length = 225
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 62/119 (52%), Gaps = 21/119 (17%)
Query: 102 TTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTW 161
T + +ALEI+ + PV+D + KL+GL+++ ++ SG S++
Sbjct: 18 TPLSKALEIMGKNHFHRLPVVDANHKLIGLITEG---LVNDASGKNATSLSIY------- 67
Query: 162 KTFNEVQKLLSKTNGK--MVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADG 218
E+ LLS+T K M+ D+ T +P+V LE+AA+++LE LPVVD +
Sbjct: 68 ----ELNYLLSRTQAKDIMIRDVHTISPMVF-----LEEAAQVMLENAVNVLPVVDEEN 117
Score = 42.7 bits (99), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/86 (23%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Query: 94 ELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL-LALDSISGSGRADNS 152
++H + P ++EA ++++E + PV+D++ +VG++++ D+ L + G R
Sbjct: 85 DVHTISPMVFLEEAAQVMLENAVNVLPVVDEENHVVGIITEKDIFLTFVDLMGLKRQGTR 144
Query: 153 MFPEVDSTWKTFNEVQKLLSKTNGKM 178
+D F +V KL ++ N +
Sbjct: 145 FVMLIDDKPGVFAQVTKLFAQENANV 170
>gi|148985896|ref|ZP_01818990.1| acetoin utilization protein AcuB, putative [Streptococcus
pneumoniae SP3-BS71]
gi|148989833|ref|ZP_01821127.1| hypothetical protein CGSSp6BS73_01563 [Streptococcus pneumoniae
SP6-BS73]
gi|148997170|ref|ZP_01824824.1| acetoin utilization protein AcuB, putative [Streptococcus
pneumoniae SP11-BS70]
gi|168490841|ref|ZP_02714984.1| AcuB family protein [Streptococcus pneumoniae CDC0288-04]
gi|168492903|ref|ZP_02717046.1| AcuB family protein [Streptococcus pneumoniae CDC3059-06]
gi|168575413|ref|ZP_02721349.1| AcuB family protein [Streptococcus pneumoniae MLV-016]
gi|169833130|ref|YP_001694216.1| AcuB family protein [Streptococcus pneumoniae Hungary19A-6]
gi|194398244|ref|YP_002037400.1| acetoin utilization protein AcuB [Streptococcus pneumoniae G54]
gi|225854262|ref|YP_002735774.1| AcuB family protein [Streptococcus pneumoniae JJA]
gi|225856430|ref|YP_002737941.1| AcuB family protein [Streptococcus pneumoniae P1031]
gi|307067357|ref|YP_003876323.1| hypothetical protein SPAP_0728 [Streptococcus pneumoniae AP200]
gi|387757182|ref|YP_006064161.1| hypothetical protein SPNOXC_06830 [Streptococcus pneumoniae OXC141]
gi|405760922|ref|YP_006701518.1| hypothetical protein SPNA45_01081 [Streptococcus pneumoniae SPNA45]
gi|410476197|ref|YP_006742956.1| acetoin utilization protein AcuB [Streptococcus pneumoniae
gamPNI0373]
gi|417686196|ref|ZP_12335474.1| CBS domain pair family protein [Streptococcus pneumoniae GA41301]
gi|417698177|ref|ZP_12347350.1| CBS domain pair family protein [Streptococcus pneumoniae GA41317]
gi|418074093|ref|ZP_12711349.1| CBS domain pair family protein [Streptococcus pneumoniae GA11184]
gi|418075862|ref|ZP_12713101.1| CBS domain pair family protein [Streptococcus pneumoniae GA47502]
gi|418078244|ref|ZP_12715467.1| CBS domain pair family protein [Streptococcus pneumoniae 4027-06]
gi|418080196|ref|ZP_12717411.1| CBS domain pair family protein [Streptococcus pneumoniae 6735-05]
gi|418086492|ref|ZP_12723663.1| CBS domain pair family protein [Streptococcus pneumoniae GA47033]
gi|418089145|ref|ZP_12726303.1| CBS domain pair family protein [Streptococcus pneumoniae GA43265]
gi|418098119|ref|ZP_12735219.1| CBS domain pair family protein [Streptococcus pneumoniae 6901-05]
gi|418104801|ref|ZP_12741861.1| CBS domain pair family protein [Streptococcus pneumoniae GA44500]
gi|418114239|ref|ZP_12751230.1| CBS domain pair family protein [Streptococcus pneumoniae 5787-06]
gi|418116477|ref|ZP_12753451.1| CBS domain pair family protein [Streptococcus pneumoniae 6963-05]
gi|418120831|ref|ZP_12757777.1| CBS domain pair family protein [Streptococcus pneumoniae GA44194]
gi|418129921|ref|ZP_12766805.1| CBS domain pair family protein [Streptococcus pneumoniae GA07643]
gi|418134485|ref|ZP_12771343.1| CBS domain pair family protein [Streptococcus pneumoniae GA11426]
gi|418148185|ref|ZP_12784950.1| CBS domain pair family protein [Streptococcus pneumoniae GA13856]
gi|418159396|ref|ZP_12796098.1| CBS domain pair family protein [Streptococcus pneumoniae GA17227]
gi|418173114|ref|ZP_12809728.1| CBS domain pair family protein [Streptococcus pneumoniae GA41277]
gi|418186761|ref|ZP_12823291.1| CBS domain pair family protein [Streptococcus pneumoniae GA47360]
gi|418202030|ref|ZP_12838460.1| CBS domain pair family protein [Streptococcus pneumoniae GA52306]
gi|418216202|ref|ZP_12842926.1| CBS domain pair family protein [Streptococcus pneumoniae
Netherlands15B-37]
gi|418229493|ref|ZP_12856100.1| CBS domain pair family protein [Streptococcus pneumoniae EU-NP01]
gi|418231821|ref|ZP_12858409.1| CBS domain pair family protein [Streptococcus pneumoniae GA07228]
gi|418236120|ref|ZP_12862689.1| CBS domain pair family protein [Streptococcus pneumoniae GA19690]
gi|419431152|ref|ZP_13971298.1| CBS domain protein [Streptococcus pneumoniae EU-NP05]
gi|419433411|ref|ZP_13973530.1| CBS domain protein [Streptococcus pneumoniae GA40183]
gi|419439963|ref|ZP_13980017.1| CBS domain protein [Streptococcus pneumoniae GA40410]
gi|419452851|ref|ZP_13992825.1| CBS domain protein [Streptococcus pneumoniae EU-NP03]
gi|419455159|ref|ZP_13995119.1| CBS domain protein [Streptococcus pneumoniae EU-NP04]
gi|419464279|ref|ZP_14004172.1| CBS domain protein [Streptococcus pneumoniae GA04175]
gi|419468625|ref|ZP_14008496.1| CBS domain protein [Streptococcus pneumoniae GA06083]
gi|419470716|ref|ZP_14010575.1| CBS domain protein [Streptococcus pneumoniae GA07914]
gi|419477419|ref|ZP_14017244.1| CBS domain protein [Streptococcus pneumoniae GA18068]
gi|419479590|ref|ZP_14019398.1| CBS domain protein [Streptococcus pneumoniae GA19101]
gi|419490683|ref|ZP_14030423.1| CBS domain protein [Streptococcus pneumoniae GA47179]
gi|419492901|ref|ZP_14032628.1| CBS domain protein [Streptococcus pneumoniae GA47210]
gi|419496934|ref|ZP_14036645.1| CBS domain protein [Streptococcus pneumoniae GA47522]
gi|419499283|ref|ZP_14038982.1| CBS domain protein [Streptococcus pneumoniae GA47597]
gi|419503565|ref|ZP_14043236.1| CBS domain protein [Streptococcus pneumoniae GA47760]
gi|419505697|ref|ZP_14045358.1| CBS domain protein [Streptococcus pneumoniae GA49194]
gi|419520693|ref|ZP_14060290.1| CBS domain protein [Streptococcus pneumoniae GA05245]
gi|419531991|ref|ZP_14071509.1| CBS domain protein [Streptococcus pneumoniae GA47794]
gi|419534194|ref|ZP_14073700.1| CBS domain protein [Streptococcus pneumoniae GA17457]
gi|421233753|ref|ZP_15690375.1| CBS domain pair family protein [Streptococcus pneumoniae 2061617]
gi|421235911|ref|ZP_15692512.1| CBS domain pair family protein [Streptococcus pneumoniae 2071004]
gi|421242746|ref|ZP_15699268.1| CBS domain pair family protein [Streptococcus pneumoniae 2081074]
gi|421249057|ref|ZP_15705520.1| CBS domain pair family protein [Streptococcus pneumoniae 2082239]
gi|421270177|ref|ZP_15721034.1| CBS domain protein [Streptococcus pneumoniae SPAR48]
gi|421274665|ref|ZP_15725497.1| CBS domain protein [Streptococcus pneumoniae GA52612]
gi|421280735|ref|ZP_15731534.1| CBS domain pair family protein [Streptococcus pneumoniae GA04672]
gi|421284891|ref|ZP_15735668.1| CBS domain pair family protein [Streptococcus pneumoniae GA60190]
gi|421289396|ref|ZP_15740148.1| CBS domain pair family protein [Streptococcus pneumoniae GA54354]
gi|421304716|ref|ZP_15755372.1| CBS domain pair family protein [Streptococcus pneumoniae GA62331]
gi|421306938|ref|ZP_15757584.1| CBS domain pair family protein [Streptococcus pneumoniae GA60132]
gi|421309182|ref|ZP_15759811.1| CBS domain pair family protein [Streptococcus pneumoniae GA62681]
gi|421313929|ref|ZP_15764519.1| CBS domain pair family protein [Streptococcus pneumoniae GA47562]
gi|444387426|ref|ZP_21185448.1| CBS domain protein [Streptococcus pneumoniae PCS125219]
gi|444390126|ref|ZP_21188041.1| CBS domain protein [Streptococcus pneumoniae PCS70012]
gi|444393052|ref|ZP_21190712.1| CBS domain protein [Streptococcus pneumoniae PCS81218]
gi|444394241|ref|ZP_21191794.1| CBS domain protein [Streptococcus pneumoniae PNI0002]
gi|444397192|ref|ZP_21194679.1| CBS domain protein [Streptococcus pneumoniae PNI0006]
gi|444400045|ref|ZP_21197468.1| CBS domain protein [Streptococcus pneumoniae PNI0007]
gi|444401585|ref|ZP_21198769.1| CBS domain protein [Streptococcus pneumoniae PNI0008]
gi|444405285|ref|ZP_21202198.1| CBS domain protein [Streptococcus pneumoniae PNI0009]
gi|444408867|ref|ZP_21205497.1| CBS domain protein [Streptococcus pneumoniae PNI0010]
gi|444410181|ref|ZP_21206729.1| CBS domain protein [Streptococcus pneumoniae PNI0076]
gi|444411909|ref|ZP_21208235.1| CBS domain protein [Streptococcus pneumoniae PNI0153]
gi|444415015|ref|ZP_21211262.1| CBS domain protein [Streptococcus pneumoniae PNI0199]
gi|444416750|ref|ZP_21212829.1| CBS domain protein [Streptococcus pneumoniae PNI0360]
gi|444419287|ref|ZP_21215160.1| CBS domain protein [Streptococcus pneumoniae PNI0427]
gi|444422598|ref|ZP_21218247.1| CBS domain protein [Streptococcus pneumoniae PNI0446]
gi|147756870|gb|EDK63910.1| acetoin utilization protein AcuB, putative [Streptococcus
pneumoniae SP11-BS70]
gi|147922042|gb|EDK73166.1| acetoin utilization protein AcuB, putative [Streptococcus
pneumoniae SP3-BS71]
gi|147924775|gb|EDK75859.1| hypothetical protein CGSSp6BS73_01563 [Streptococcus pneumoniae
SP6-BS73]
gi|168995632|gb|ACA36244.1| AcuB family protein [Streptococcus pneumoniae Hungary19A-6]
gi|183574557|gb|EDT95085.1| AcuB family protein [Streptococcus pneumoniae CDC0288-04]
gi|183576974|gb|EDT97502.1| AcuB family protein [Streptococcus pneumoniae CDC3059-06]
gi|183578468|gb|EDT98996.1| AcuB family protein [Streptococcus pneumoniae MLV-016]
gi|194357911|gb|ACF56359.1| acetoin utilization protein AcuB, putative [Streptococcus
pneumoniae G54]
gi|225723390|gb|ACO19243.1| AcuB family protein [Streptococcus pneumoniae JJA]
gi|225724721|gb|ACO20573.1| AcuB family protein [Streptococcus pneumoniae P1031]
gi|301799771|emb|CBW32340.1| conserved hypothetical protein [Streptococcus pneumoniae OXC141]
gi|306408894|gb|ADM84321.1| CBS domain protein [Streptococcus pneumoniae AP200]
gi|332076033|gb|EGI86499.1| CBS domain pair family protein [Streptococcus pneumoniae GA41301]
gi|332202618|gb|EGJ16687.1| CBS domain pair family protein [Streptococcus pneumoniae GA41317]
gi|353747435|gb|EHD28091.1| CBS domain pair family protein [Streptococcus pneumoniae 4027-06]
gi|353749593|gb|EHD30237.1| CBS domain pair family protein [Streptococcus pneumoniae GA11184]
gi|353749651|gb|EHD30294.1| CBS domain pair family protein [Streptococcus pneumoniae GA47502]
gi|353753807|gb|EHD34423.1| CBS domain pair family protein [Streptococcus pneumoniae 6735-05]
gi|353759755|gb|EHD40338.1| CBS domain pair family protein [Streptococcus pneumoniae GA47033]
gi|353762832|gb|EHD43390.1| CBS domain pair family protein [Streptococcus pneumoniae GA43265]
gi|353770484|gb|EHD50997.1| CBS domain pair family protein [Streptococcus pneumoniae 6901-05]
gi|353779235|gb|EHD59701.1| CBS domain pair family protein [Streptococcus pneumoniae GA44500]
gi|353787537|gb|EHD67939.1| CBS domain pair family protein [Streptococcus pneumoniae 5787-06]
gi|353790315|gb|EHD70698.1| CBS domain pair family protein [Streptococcus pneumoniae 6963-05]
gi|353793658|gb|EHD74017.1| CBS domain pair family protein [Streptococcus pneumoniae GA44194]
gi|353803213|gb|EHD83505.1| CBS domain pair family protein [Streptococcus pneumoniae GA07643]
gi|353812860|gb|EHD93093.1| CBS domain pair family protein [Streptococcus pneumoniae GA13856]
gi|353824748|gb|EHE04916.1| CBS domain pair family protein [Streptococcus pneumoniae GA17227]
gi|353839813|gb|EHE19887.1| CBS domain pair family protein [Streptococcus pneumoniae GA41277]
gi|353853347|gb|EHE33330.1| CBS domain pair family protein [Streptococcus pneumoniae GA47360]
gi|353867833|gb|EHE47723.1| CBS domain pair family protein [Streptococcus pneumoniae GA52306]
gi|353873253|gb|EHE53114.1| CBS domain pair family protein [Streptococcus pneumoniae
Netherlands15B-37]
gi|353888127|gb|EHE67903.1| CBS domain pair family protein [Streptococcus pneumoniae GA07228]
gi|353889679|gb|EHE69447.1| CBS domain pair family protein [Streptococcus pneumoniae EU-NP01]
gi|353894049|gb|EHE73794.1| CBS domain pair family protein [Streptococcus pneumoniae GA19690]
gi|353903075|gb|EHE78601.1| CBS domain pair family protein [Streptococcus pneumoniae GA11426]
gi|379539498|gb|EHZ04677.1| CBS domain protein [Streptococcus pneumoniae GA04175]
gi|379540596|gb|EHZ05768.1| CBS domain protein [Streptococcus pneumoniae GA05245]
gi|379545432|gb|EHZ10571.1| CBS domain protein [Streptococcus pneumoniae GA07914]
gi|379546728|gb|EHZ11866.1| CBS domain protein [Streptococcus pneumoniae GA06083]
gi|379566801|gb|EHZ31788.1| CBS domain protein [Streptococcus pneumoniae GA18068]
gi|379567238|gb|EHZ32224.1| CBS domain protein [Streptococcus pneumoniae GA17457]
gi|379573244|gb|EHZ38200.1| CBS domain protein [Streptococcus pneumoniae GA19101]
gi|379577541|gb|EHZ42460.1| CBS domain protein [Streptococcus pneumoniae GA40183]
gi|379580574|gb|EHZ45464.1| CBS domain protein [Streptococcus pneumoniae GA40410]
gi|379594262|gb|EHZ59072.1| CBS domain protein [Streptococcus pneumoniae GA47179]
gi|379594939|gb|EHZ59748.1| CBS domain protein [Streptococcus pneumoniae GA47210]
gi|379601448|gb|EHZ66221.1| CBS domain protein [Streptococcus pneumoniae GA47522]
gi|379602337|gb|EHZ67108.1| CBS domain protein [Streptococcus pneumoniae GA47597]
gi|379607611|gb|EHZ72357.1| CBS domain protein [Streptococcus pneumoniae GA49194]
gi|379608747|gb|EHZ73492.1| CBS domain protein [Streptococcus pneumoniae GA47794]
gi|379609163|gb|EHZ73904.1| CBS domain protein [Streptococcus pneumoniae GA47760]
gi|379627435|gb|EHZ92047.1| CBS domain protein [Streptococcus pneumoniae EU-NP03]
gi|379629616|gb|EHZ94210.1| CBS domain protein [Streptococcus pneumoniae EU-NP04]
gi|379632396|gb|EHZ96972.1| CBS domain protein [Streptococcus pneumoniae EU-NP05]
gi|395602650|gb|EJG62792.1| CBS domain pair family protein [Streptococcus pneumoniae 2061617]
gi|395604830|gb|EJG64962.1| CBS domain pair family protein [Streptococcus pneumoniae 2071004]
gi|395610066|gb|EJG70147.1| CBS domain pair family protein [Streptococcus pneumoniae 2081074]
gi|395615686|gb|EJG75702.1| CBS domain pair family protein [Streptococcus pneumoniae 2082239]
gi|395870829|gb|EJG81942.1| CBS domain protein [Streptococcus pneumoniae SPAR48]
gi|395875393|gb|EJG86474.1| CBS domain protein [Streptococcus pneumoniae GA52612]
gi|395884092|gb|EJG95134.1| CBS domain pair family protein [Streptococcus pneumoniae GA04672]
gi|395886870|gb|EJG97885.1| CBS domain pair family protein [Streptococcus pneumoniae GA60190]
gi|395890656|gb|EJH01662.1| CBS domain pair family protein [Streptococcus pneumoniae GA54354]
gi|395905378|gb|EJH16283.1| CBS domain pair family protein [Streptococcus pneumoniae GA62331]
gi|395908901|gb|EJH19778.1| CBS domain pair family protein [Streptococcus pneumoniae GA60132]
gi|395911926|gb|EJH22790.1| CBS domain pair family protein [Streptococcus pneumoniae GA62681]
gi|395914429|gb|EJH25273.1| CBS domain pair family protein [Streptococcus pneumoniae GA47562]
gi|404277811|emb|CCM08366.1| conserved hypothetical protein [Streptococcus pneumoniae SPNA45]
gi|406369142|gb|AFS42832.1| putative acetoin utilization protein AcuB [Streptococcus pneumoniae
gamPNI0373]
gi|429317613|emb|CCP37401.1| conserved hypothetical protein [Streptococcus pneumoniae SPN034156]
gi|429319155|emb|CCP32394.1| conserved hypothetical protein [Streptococcus pneumoniae SPN034183]
gi|429320970|emb|CCP34368.1| conserved hypothetical protein [Streptococcus pneumoniae SPN994039]
gi|429322790|emb|CCP30409.1| conserved hypothetical protein [Streptococcus pneumoniae SPN994038]
gi|444253300|gb|ELU59758.1| CBS domain protein [Streptococcus pneumoniae PCS125219]
gi|444256589|gb|ELU62927.1| CBS domain protein [Streptococcus pneumoniae PCS70012]
gi|444261308|gb|ELU67612.1| CBS domain protein [Streptococcus pneumoniae PNI0002]
gi|444262423|gb|ELU68721.1| CBS domain protein [Streptococcus pneumoniae PNI0006]
gi|444262498|gb|ELU68794.1| CBS domain protein [Streptococcus pneumoniae PCS81218]
gi|444267431|gb|ELU73334.1| CBS domain protein [Streptococcus pneumoniae PNI0007]
gi|444267909|gb|ELU73792.1| CBS domain protein [Streptococcus pneumoniae PNI0008]
gi|444269161|gb|ELU74976.1| CBS domain protein [Streptococcus pneumoniae PNI0010]
gi|444274648|gb|ELU80293.1| CBS domain protein [Streptococcus pneumoniae PNI0009]
gi|444275241|gb|ELU80868.1| CBS domain protein [Streptococcus pneumoniae PNI0153]
gi|444278112|gb|ELU83588.1| CBS domain protein [Streptococcus pneumoniae PNI0076]
gi|444280815|gb|ELU86166.1| CBS domain protein [Streptococcus pneumoniae PNI0199]
gi|444285219|gb|ELU90300.1| CBS domain protein [Streptococcus pneumoniae PNI0360]
gi|444287130|gb|ELU92071.1| CBS domain protein [Streptococcus pneumoniae PNI0427]
gi|444288026|gb|ELU92929.1| CBS domain protein [Streptococcus pneumoniae PNI0446]
Length = 218
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 68/131 (51%), Gaps = 20/131 (15%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT K + + P TTV A +++ E+ + PVI++D +LVGLV++ +
Sbjct: 3 VKDFMTRK--VVYISPDTTVSHAADLMREQGLHRLPVIEND-QLVGLVTEGTI------- 52
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+A S +T + E+ LL+KT V D+M V V +LEDA L+L
Sbjct: 53 --AQASPS-----KATSLSIYEMNYLLNKTK---VKDVMIRDVVTVSGYASLEDATYLML 102
Query: 205 ETKYRRLPVVD 215
+ K LPVVD
Sbjct: 103 KNKISILPVVD 113
>gi|330806493|ref|XP_003291203.1| hypothetical protein DICPUDRAFT_95316 [Dictyostelium purpureum]
gi|325078625|gb|EGC32266.1| hypothetical protein DICPUDRAFT_95316 [Dictyostelium purpureum]
Length = 147
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 64/135 (47%), Gaps = 19/135 (14%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL-LALDSI 143
V MT+K L+ + +T+D AL+ L I PV+D+D L G+V+D DL LA
Sbjct: 5 VRQLMTSKC-LYTISMDSTLDVALKSLNANSIHRLPVVDNDGNLKGIVTDRDLRLA---- 59
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
DS + F ++ + K V +M PV + + + + DAA+L+
Sbjct: 60 -------------TDSPFIQFETNEERMEKLKQHKVSSIMKQNPVTIEDYSPVVDAAKLM 106
Query: 204 LETKYRRLPVVDADG 218
+ LPVVD +G
Sbjct: 107 RVSNVGGLPVVDKNG 121
>gi|282162967|ref|YP_003355352.1| hypothetical protein MCP_0297 [Methanocella paludicola SANAE]
gi|282155281|dbj|BAI60369.1| conserved hypothetical protein [Methanocella paludicola SANAE]
Length = 325
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 69/125 (55%), Gaps = 33/125 (26%)
Query: 92 KEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLAL--DSISGSGRA 149
+E++ V+ ++D+A+++++++ + G PVID + +VG++++ D++ L DS+SG+
Sbjct: 134 EEDVATVQDDASLDDAIKVMIDRSVGGVPVIDPESIVVGIITERDIVRLMGDSVSGT--- 190
Query: 150 DNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYR 209
+V+ ++S+ +T AP +E AA+ ++E+ +R
Sbjct: 191 ----------------KVRDIMSRR--------VTTAP----PNMPIETAAKTMIESGFR 222
Query: 210 RLPVV 214
RLPVV
Sbjct: 223 RLPVV 227
>gi|339641089|ref|ZP_08662533.1| CBS domain protein [Streptococcus sp. oral taxon 056 str. F0418]
gi|339454358|gb|EGP66973.1| CBS domain protein [Streptococcus sp. oral taxon 056 str. F0418]
Length = 218
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 70/133 (52%), Gaps = 20/133 (15%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT K + + P TT+ A +++ E+ + PVI++D KLVGLV++ +I+
Sbjct: 3 VKDFMTRK--VVYISPDTTIAHAADMMREQTLHRLPVIEND-KLVGLVTE------GTIA 53
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+ + +T + E+ LL+KT V D+M + V +LEDA L+L
Sbjct: 54 EASPSK--------ATSLSIYEMNYLLNKTK---VKDVMIHDVITVSRYASLEDATYLML 102
Query: 205 ETKYRRLPVVDAD 217
+ K LPVVD +
Sbjct: 103 KNKVGILPVVDNE 115
>gi|124028008|ref|YP_001013328.1| hypothetical protein Hbut_1146 [Hyperthermus butylicus DSM 5456]
gi|123978702|gb|ABM80983.1| conserved archaeal protein [Hyperthermus butylicus DSM 5456]
Length = 240
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 73/140 (52%), Gaps = 23/140 (16%)
Query: 78 PSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL 137
P + V +FM + + V+PTT V + ++++ KR PV+ + KL+G+++++DL
Sbjct: 104 PEKLMKPVEEFM--ERNVVYVEPTTPVYKVWQVMMSKRFAALPVVSEG-KLIGVIAEHDL 160
Query: 138 LALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLE 197
+ + G R D +++ + +++ G +V +LM+ PV V T L
Sbjct: 161 I----VRGFARPD----------FESPSGIRR------GPLVRELMSTPPVTVLPTVPLL 200
Query: 198 DAARLLLETKYRRLPVVDAD 217
AARL++E R+ VVD D
Sbjct: 201 SAARLIVERYIGRVYVVDDD 220
>gi|442804457|ref|YP_007372606.1| transcriptional regulator [Clostridium stercorarium subsp.
stercorarium DSM 8532]
gi|442740307|gb|AGC67996.1| transcriptional regulator [Clostridium stercorarium subsp.
stercorarium DSM 8532]
Length = 213
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 66/132 (50%), Gaps = 20/132 (15%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D MTT + + P T+ +A EI+ + I PV+ D KLVG+VS+ D+
Sbjct: 3 VKDKMTTN--IITISPDATIPDAHEIMTKNNIRRLPVVKD-GKLVGVVSNLDIT------ 53
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
RA S +T + NE+ +L+KT + +MT P+ + LE+AA L+
Sbjct: 54 ---RATPS-----PATSLSINELTYILAKTK---ISKVMTKNPITISPNALLEEAAILMR 102
Query: 205 ETKYRRLPVVDA 216
+ LPVVD+
Sbjct: 103 DNGVSFLPVVDS 114
>gi|84489243|ref|YP_447475.1| hypothetical protein Msp_0431 [Methanosphaera stadtmanae DSM 3091]
gi|84372562|gb|ABC56832.1| GuaB [Methanosphaera stadtmanae DSM 3091]
Length = 498
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 54/124 (43%), Gaps = 30/124 (24%)
Query: 91 TKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRAD 150
T +E+ + P TV EA +I+ + I+G PV++DD +VG++S D
Sbjct: 99 TVKEVISISPDETVSEAQQIMDIEEISGLPVVNDDNIVVGIISRRD-------------- 144
Query: 151 NSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRR 210
++ L K + V D MT V + E T E+A + E K R
Sbjct: 145 ----------------IKPLRGKYLNRKVSDAMTQEVVTISENTTTEEALDVAYENKVER 188
Query: 211 LPVV 214
LPVV
Sbjct: 189 LPVV 192
Score = 37.7 bits (86), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 43/89 (48%), Gaps = 5/89 (5%)
Query: 69 GTLTANSAAPSSGVY---TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDD 125
G ++ P G Y V D MT +E+ + TT +EAL++ E ++ PV+ D
Sbjct: 138 GIISRRDIKPLRGKYLNRKVSDAMT--QEVVTISENTTTEEALDVAYENKVERLPVVSDV 195
Query: 126 WKLVGLVSDYDLLALDSISGSGRADNSMF 154
+L+G+V+ D+L + R N +
Sbjct: 196 NELLGIVTMKDILERKKYPDAARDKNGRY 224
>gi|440699101|ref|ZP_20881406.1| CBS domain protein [Streptomyces turgidiscabies Car8]
gi|440278407|gb|ELP66445.1| CBS domain protein [Streptomyces turgidiscabies Car8]
Length = 236
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 67/136 (49%), Gaps = 7/136 (5%)
Query: 82 VYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALD 141
++TVGD MT +E+ T + + +L RI+G PV+D D K++G+VS DL+
Sbjct: 3 IHTVGDVMT--DEVVQAHRETPFKDVVRLLDAHRISGLPVVDHDDKVIGVVSGTDLVRGQ 60
Query: 142 SISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAAR 201
+ + SG + + L+ T G++ + TPA + V + DAAR
Sbjct: 61 A-ARSGGRRDRRYRLPRLRRPGRRAAPGALATTAGEL---MSTPA-ITVHPEQPVPDAAR 115
Query: 202 LLLETKYRRLPVVDAD 217
++ RLPVVD +
Sbjct: 116 VMERHGIERLPVVDEE 131
>gi|281208518|gb|EFA82694.1| putative acetoin dehydrogenase [Polysphondylium pallidum PN500]
Length = 227
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 67/145 (46%), Gaps = 21/145 (14%)
Query: 75 SAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSD 134
S P+ V MT + ++ V +T+D AL+ L I PVIDDD L G+++D
Sbjct: 3 SRLPNVTNVLVKHLMT--KTIYSVSMDSTLDMALKCLNTHSIHRIPVIDDDGNLKGIITD 60
Query: 135 YDL-LALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRET 193
DL LA DS PE + ++ + K + V +M P+ + E
Sbjct: 61 RDLRLACDS---------PFLPESN---------EERVMKLSQHKVSQVMKNNPLTIEEN 102
Query: 194 TNLEDAARLLLETKYRRLPVVDADG 218
+ + D A+LL + LPVVD +G
Sbjct: 103 SPVVDVAKLLRVSDVGGLPVVDNNG 127
>gi|55820457|ref|YP_138899.1| acetoin utilization protein, truncated, partial [Streptococcus
thermophilus LMG 18311]
gi|55736442|gb|AAV60084.1| acetoin utilization protein, truncated [Streptococcus thermophilus
LMG 18311]
Length = 139
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 62/120 (51%), Gaps = 18/120 (15%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P TTV A +I+ +K + PVI+ D KLVGL+++ + S S S++
Sbjct: 8 VSPETTVATAADIIRDKGLRRLPVIEHD-KLVGLITEG---TMAEASPSKATSLSIY--- 60
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
E+ LL+KT VGD+M + V + +LEDA ++L+ K LPVVD D
Sbjct: 61 --------EMNYLLNKTK---VGDIMIKNVLTVSKYASLEDAICIMLQNKVGVLPVVDND 109
>gi|452949577|gb|EME55044.1| CBS domain containing membrane protein [Amycolatopsis decaplanina
DSM 44594]
Length = 231
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 57/121 (47%), Gaps = 17/121 (14%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
VKP T +L R++G PV+DD+ ++VG+VS DLL E
Sbjct: 18 VKPETPFKAITVLLTSWRLSGAPVVDDEGRVVGVVSQRDLL-----------------ER 60
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
+ + +L K G+ +LMT + V + +++A RL+ + + RLPV+D D
Sbjct: 61 EIRHRLLRFRPRLRRKVEGRRADELMTTPAITVAQDAGVDEAIRLMEDHRVHRLPVLDDD 120
Query: 218 G 218
Sbjct: 121 A 121
Score = 41.6 bits (96), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 33/54 (61%), Gaps = 5/54 (9%)
Query: 104 VDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
VDEA+ ++ + R+ PV+DDD KLVG+V DLL G R+D+ + EV
Sbjct: 99 VDEAIRLMEDHRVHRLPVLDDDAKLVGIVGRSDLL-----RGFLRSDSGLCAEV 147
>gi|407710625|ref|YP_006794489.1| hypothetical protein BUPH_05583 [Burkholderia phenoliruptrix
BR3459a]
gi|407239308|gb|AFT89506.1| CBS domain-containing protein [Burkholderia phenoliruptrix BR3459a]
Length = 230
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 59/133 (44%), Gaps = 15/133 (11%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGS 146
D MTT + P T+ +A + V+ I+G PV+D + K+VG+VS DLL
Sbjct: 5 DIMTTA--VVTATPDMTIYDAARLFVDNHISGMPVLDANGKVVGIVSQGDLLH------- 55
Query: 147 GRADNSMFPEVDSTWKTF-----NEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAAR 201
R +N W F E K +G VGD+M + + + L+ A
Sbjct: 56 -RVENGTRHGKRRWWLEFLLSSPREQAARYVKEHGHNVGDVMCTQVITIADDMPLDQVAD 114
Query: 202 LLLETKYRRLPVV 214
L+ +R+PV+
Sbjct: 115 LMERRHLKRVPVL 127
>gi|222100218|ref|YP_002534786.1| Inosine-5'-monophosphate dehydrogenase [Thermotoga neapolitana DSM
4359]
gi|221572608|gb|ACM23420.1| Inosine-5'-monophosphate dehydrogenase [Thermotoga neapolitana DSM
4359]
Length = 487
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 48/90 (53%), Gaps = 3/90 (3%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
+ D MT +E+L V P ++++A EIL E RI P++ D KLVGL++ D+L++
Sbjct: 150 IKDLMTPREKLIVAPPDISLEKAKEILHEHRIEKLPLVSRDNKLVGLITIKDILSVIEHP 209
Query: 145 GSGRADNSMF---PEVDSTWKTFNEVQKLL 171
+ R D V + T V+KL+
Sbjct: 210 NAARDDKGRLLVGAAVGTGPDTMERVEKLV 239
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 57/122 (46%), Gaps = 34/122 (27%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P TV EA++++ E +I G PV+D++ KLVGL+++ D+
Sbjct: 101 VTPDMTVKEAVDLMSEYKIGGLPVVDEEGKLVGLLTNRDI-------------------- 140
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAP--VVVRETTNLEDAARLLLETKYRRLPVVD 215
++ LSK + DLMTP +V +LE A +L E + +LP+V
Sbjct: 141 --------RFERNLSKK----IKDLMTPREKLIVAPPDISLEKAKEILHEHRIEKLPLVS 188
Query: 216 AD 217
D
Sbjct: 189 RD 190
>gi|448363853|ref|ZP_21552448.1| peptidase M50 [Natrialba asiatica DSM 12278]
gi|445645437|gb|ELY98441.1| peptidase M50 [Natrialba asiatica DSM 12278]
Length = 497
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 35/57 (61%), Gaps = 4/57 (7%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVID----DDWKLVGLVSDYD 136
TV D MT LH V P T+V E ++ + +R TG+PVID DD +LVGLV+ D
Sbjct: 327 TVADIMTPAGNLHTVSPETSVAELVQRMFSERHTGYPVIDASGFDDGRLVGLVTLSD 383
>gi|295106203|emb|CBL03746.1| CBS-domain-containing membrane protein [Gordonibacter pamelaeae
7-10-1-b]
Length = 161
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 69/141 (48%), Gaps = 16/141 (11%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLAL--- 140
T+GD M + +++ + + E + + E +G VID+D +VG +SD D++
Sbjct: 4 TIGDIM--ERDVYTCRYDQNLGEIVALFNELGTSGLAVIDEDRHVVGFISDGDIMKAVAA 61
Query: 141 ---DSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLE 197
SI G G A+ ++ ++F E + L N V +L + V ++
Sbjct: 62 QKTRSIFGGGYANMVLYDN-----ESFEEKARALKHRN---VMELAVQKVLCVTADQSIG 113
Query: 198 DAARLLLETKYRRLPVVDADG 218
+ A +L + K++++PV+D DG
Sbjct: 114 EIADVLAKKKFKKVPVIDEDG 134
>gi|448312294|ref|ZP_21502041.1| peptidase M50 [Natronolimnobius innermongolicus JCM 12255]
gi|445601894|gb|ELY55875.1| peptidase M50 [Natronolimnobius innermongolicus JCM 12255]
Length = 399
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 40/64 (62%), Gaps = 3/64 (4%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDW---KLVGLVSDYDLLAL 140
TVGD MT +LH V+P TTV E ++ + +R TG+PVI+ D +LVGLV+ D +
Sbjct: 252 TVGDIMTPAGDLHTVEPDTTVSELIQRMFTERHTGYPVIERDAYGERLVGLVTLTDAREI 311
Query: 141 DSIS 144
D +
Sbjct: 312 DPVE 315
>gi|385263153|ref|ZP_10041245.1| CBS domain protein [Streptococcus sp. SK643]
gi|385188467|gb|EIF35952.1| CBS domain protein [Streptococcus sp. SK643]
Length = 218
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 70/133 (52%), Gaps = 20/133 (15%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT K + + P TTV A +++ E+ + PVI++D +LVGLV++ +I+
Sbjct: 3 VKDFMTRK--VVYISPDTTVSHAADLMREQGLHRLPVIEND-QLVGLVTE------GTIA 53
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+ P ++ F E+ LL+KT V D+M + V +LEDA L+L
Sbjct: 54 QAS-------PSKATSLSIF-EMNYLLNKTK---VKDVMIRDVITVSRYASLEDATYLML 102
Query: 205 ETKYRRLPVVDAD 217
+ K LPVVD +
Sbjct: 103 KNKIGILPVVDNN 115
>gi|298291193|ref|YP_003693132.1| hypothetical protein Snov_1194 [Starkeya novella DSM 506]
gi|296927704|gb|ADH88513.1| CBS domain containing membrane protein [Starkeya novella DSM 506]
Length = 228
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 56/117 (47%), Gaps = 5/117 (4%)
Query: 99 KPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVD 158
K T V + + L+E+RI+G P++DD K+VG+VS+ DL+ R + VD
Sbjct: 15 KTTDLVVQIAKTLLERRISGMPIVDDKGKMVGIVSEGDLIRRAEAGTERRRSWWLQAFVD 74
Query: 159 STWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVD 215
+ K +G+ D+M PV T L + A L+ +R+P+V+
Sbjct: 75 D-----GTLAAEYVKAHGRTAADVMHRDPVTAGPDTPLHEIAALMESHGVKRIPIVE 126
>gi|256828518|ref|YP_003157246.1| hypothetical protein Dbac_0707 [Desulfomicrobium baculatum DSM
4028]
gi|256577694|gb|ACU88830.1| CBS domain containing membrane protein [Desulfomicrobium baculatum
DSM 4028]
Length = 221
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 70/131 (53%), Gaps = 19/131 (14%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
+ D+MT +++ V P T++ A +++ EK I PV+DD K++G++SD D+
Sbjct: 3 IKDWMT--KDVITVDPETSMMRAAKLMKEKGIRRLPVVDDKGKVLGMLSDRDV------- 53
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
A S +D +E+ LLS+ V ++MTP+P+ +RET + A ++
Sbjct: 54 --KEASPSKATTLD-----VHELYYLLSEIK---VKNIMTPSPLTIRETDTVVKCAAIMH 103
Query: 205 ETKYRRLPVVD 215
+ K LPV++
Sbjct: 104 DKKISGLPVLN 114
>gi|298290161|ref|YP_003692100.1| signal transduction protein with CBS domains [Starkeya novella DSM
506]
gi|296926672|gb|ADH87481.1| putative signal transduction protein with CBS domains [Starkeya
novella DSM 506]
Length = 228
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 56/117 (47%), Gaps = 5/117 (4%)
Query: 99 KPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVD 158
K T V + + L+E+RI+G P++DD K+VG++S+ DL+ R + VD
Sbjct: 15 KATDLVVQIAKTLLERRISGMPIVDDKGKMVGIISEGDLIRRAEAGTERRRSWWLQAFVD 74
Query: 159 STWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVD 215
+ K +G+ D+M PV T L + A L+ +R+P+V+
Sbjct: 75 D-----GTLAAEYVKAHGRTAADVMHRDPVTAGPDTPLHEIAALMESHGVKRIPIVE 126
>gi|87121679|ref|ZP_01077566.1| CBS domain protein [Marinomonas sp. MED121]
gi|86162930|gb|EAQ64208.1| CBS domain protein [Marinomonas sp. MED121]
Length = 148
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 66/138 (47%), Gaps = 27/138 (19%)
Query: 82 VYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA-- 139
V TV D M T L + T ++ +A +I+ +K I P+IDDD K +G+++ + L
Sbjct: 7 VQTVSDLMVTN--LVTLAETASLADAKKIMQDKNIRNLPIIDDDGKCIGMLTQREYLKHA 64
Query: 140 --LDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLE 197
L S G+G E+Q +SK M D++T + + T+L+
Sbjct: 65 FYLVSQFGTGMLSKK-------------EMQTPVSKA---MNTDMLT-----IEQDTHLD 103
Query: 198 DAARLLLETKYRRLPVVD 215
AA +E KY LPVVD
Sbjct: 104 TAAEFFVENKYGCLPVVD 121
>gi|456392579|gb|EMF57922.1| CBS domain-containing protein [Streptomyces bottropensis ATCC
25435]
Length = 228
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 69/146 (47%), Gaps = 17/146 (11%)
Query: 76 AAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDY 135
AA S + V D MT + + V + +E + + R++ PV++ + +++G+VS+
Sbjct: 2 AAVSETPHIVSDVMT--QTVVAVGRDAPFKQIVETMEQWRVSAMPVLEGEGRVIGVVSEA 59
Query: 136 DLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKL--LSKTNGKMVGDLMTPAPVVVRET 193
DLL + DS + + +L ++K + G+LM+ V V
Sbjct: 60 DLLPKEEFR-------------DSDPSLYEQRGRLSAIAKAGAVVAGELMSTPAVTVHPD 106
Query: 194 TNLEDAARLLLETKYRRLPVVDADGW 219
T L AAR++ + +RLPVVD G
Sbjct: 107 TTLSQAARIMAVRRVKRLPVVDDVGM 132
Score = 40.8 bits (94), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 7/90 (7%)
Query: 75 SAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSD 134
SA +G G+ M+T V P TT+ +A I+ +R+ PV+DD L G+VS
Sbjct: 82 SAIAKAGAVVAGELMSTPAV--TVHPDTTLSQAARIMAVRRVKRLPVVDDVGMLQGIVSR 139
Query: 135 YDLLALDSISGSGRADNSMFPEVDSTWKTF 164
DLL + R+D+ + EV T ++
Sbjct: 140 ADLLKV-----FLRSDDDIEEEVRRTVVSY 164
>gi|116747758|ref|YP_844445.1| hypothetical protein Sfum_0309 [Syntrophobacter fumaroxidans MPOB]
gi|116696822|gb|ABK16010.1| CBS domain containing membrane protein [Syntrophobacter
fumaroxidans MPOB]
Length = 230
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 60/121 (49%), Gaps = 18/121 (14%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
++ ++ A+ ++ E +I PV+ KLVG+VSD DL RA S
Sbjct: 14 IEEDDSMQHAMSLMKEHKIRMLPVVAR-GKLVGVVSDTDL---------KRASAS----- 58
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
D+T +E+ L+SK V D+MT P+ V + +E+ A LL+ K PV+D D
Sbjct: 59 DATTLDMHELLYLISKIK---VQDIMTKTPITVSQNFTVEETAELLMRKKISGCPVLDDD 115
Query: 218 G 218
G
Sbjct: 116 G 116
Score = 43.9 bits (102), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 62/121 (51%), Gaps = 4/121 (3%)
Query: 59 LRRSSAVFASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITG 118
L+R+SA A+ TL + V D MT V TV+E E+L+ K+I+G
Sbjct: 52 LKRASASDAT-TLDMHELLYLISKIKVQDIMTKTPI--TVSQNFTVEETAELLMRKKISG 108
Query: 119 FPVIDDDWKLVGLVSDYDLL-ALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGK 177
PV+DDD +VG+++ DL L +SG G+ + +V+ + + ++ K +G+
Sbjct: 109 CPVLDDDGLVVGVITRDDLFKVLIMLSGLGKKGIQLAFQVEDRSGSIKNITDVIRKYDGR 168
Query: 178 M 178
+
Sbjct: 169 I 169
>gi|221231550|ref|YP_002510702.1| hypothetical protein SPN23F_06770 [Streptococcus pneumoniae ATCC
700669]
gi|415697645|ref|ZP_11456875.1| CBS domain pair family protein [Streptococcus pneumoniae 459-5]
gi|415749160|ref|ZP_11477104.1| CBS domain pair family protein [Streptococcus pneumoniae SV35]
gi|415751842|ref|ZP_11478953.1| CBS domain pair family protein [Streptococcus pneumoniae SV36]
gi|418123018|ref|ZP_12759953.1| CBS domain pair family protein [Streptococcus pneumoniae GA44378]
gi|418127605|ref|ZP_12764501.1| CBS domain pair family protein [Streptococcus pneumoniae NP170]
gi|418136775|ref|ZP_12773618.1| CBS domain pair family protein [Streptococcus pneumoniae GA11663]
gi|418177776|ref|ZP_12814360.1| CBS domain pair family protein [Streptococcus pneumoniae GA41565]
gi|419472808|ref|ZP_14012659.1| CBS domain protein [Streptococcus pneumoniae GA13430]
gi|220674010|emb|CAR68523.1| conserved hypothetical protein [Streptococcus pneumoniae ATCC
700669]
gi|353798491|gb|EHD78821.1| CBS domain pair family protein [Streptococcus pneumoniae GA44378]
gi|353800066|gb|EHD80380.1| CBS domain pair family protein [Streptococcus pneumoniae NP170]
gi|353844550|gb|EHE24593.1| CBS domain pair family protein [Streptococcus pneumoniae GA41565]
gi|353902703|gb|EHE78231.1| CBS domain pair family protein [Streptococcus pneumoniae GA11663]
gi|379552315|gb|EHZ17404.1| CBS domain protein [Streptococcus pneumoniae GA13430]
gi|381309538|gb|EIC50371.1| CBS domain pair family protein [Streptococcus pneumoniae SV36]
gi|381317454|gb|EIC58179.1| CBS domain pair family protein [Streptococcus pneumoniae SV35]
gi|381319243|gb|EIC59959.1| CBS domain pair family protein [Streptococcus pneumoniae 459-5]
Length = 218
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 68/131 (51%), Gaps = 20/131 (15%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT K + + P TTV A +++ E+ + PVI++D +LVGLV++ +
Sbjct: 3 VKDFMTRK--VVYISPDTTVSHAADLMREQGLHRLPVIEND-QLVGLVTEGTI------- 52
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+A S +T + E+ LL+KT V D+M V V +LEDA L+L
Sbjct: 53 --AQASPS-----KATSLSIYEMNYLLNKTK---VKDVMIRDVVTVSGYASLEDATYLML 102
Query: 205 ETKYRRLPVVD 215
+ K LPVVD
Sbjct: 103 KNKISILPVVD 113
>gi|406672855|ref|ZP_11080080.1| inosine-5'-monophosphate dehydrogenase [Bergeyella zoohelcum CCUG
30536]
gi|423315693|ref|ZP_17293598.1| inosine-5'-monophosphate dehydrogenase [Bergeyella zoohelcum ATCC
43767]
gi|405585797|gb|EKB59600.1| inosine-5'-monophosphate dehydrogenase [Bergeyella zoohelcum ATCC
43767]
gi|405587399|gb|EKB61127.1| inosine-5'-monophosphate dehydrogenase [Bergeyella zoohelcum CCUG
30536]
Length = 486
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 58/113 (51%), Gaps = 31/113 (27%)
Query: 103 TVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWK 162
T+ EA E + +I+G PV+D++ L+G++++ D+ + +S
Sbjct: 108 TLGEAKETMARYKISGLPVVDEENNLIGIITNRDVKYQEDLS------------------ 149
Query: 163 TFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVD 215
+V+ L++K N L+T + TNLE+A ++LLE + +LP+VD
Sbjct: 150 --VKVEHLMTKEN------LITS-----HKDTNLEEAKKILLENRVEKLPIVD 189
Score = 41.6 bits (96), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 32/51 (62%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL 137
+ + TKE L T ++EA +IL+E R+ P++D+ KLVGL++ D+
Sbjct: 153 EHLMTKENLITSHKDTNLEEAKKILLENRVEKLPIVDEKNKLVGLITIKDI 203
>gi|336476762|ref|YP_004615903.1| putative signal transduction protein with CBS domains
[Methanosalsum zhilinae DSM 4017]
gi|335930143|gb|AEH60684.1| putative signal transduction protein with CBS domains
[Methanosalsum zhilinae DSM 4017]
Length = 154
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 65/120 (54%), Gaps = 5/120 (4%)
Query: 99 KPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRA-DNSMFPEV 157
KP + + ++L + I+G PV++ + KL+GL+S+ DLL L I G S F +
Sbjct: 15 KPDDRISDVAQLLRKNEISGMPVVESE-KLIGLISELDLLQLLEIPKHGTYWLPSPFEVI 73
Query: 158 DSTWK---TFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVV 214
+ + ++ E +++L+ K V ++M V ++E+A+ ++++ K RLPVV
Sbjct: 74 EIPIRELISWEEAKRMLTNIGTKPVKEIMRTKIYTVSPEDSIEEASTIMIKNKINRLPVV 133
>gi|221632822|ref|YP_002522044.1| IMP dehydrogenase [Thermomicrobium roseum DSM 5159]
gi|221156254|gb|ACM05381.1| IMP dehydrogenase [Thermomicrobium roseum DSM 5159]
Length = 166
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 64/124 (51%), Gaps = 9/124 (7%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
+ P T+V E ++ E I+G PVID+ +++G+V+++DL+A ++ + P +
Sbjct: 18 ISPETSVGEIARLMWEHAISGVPVIDEQRRVIGIVTEFDLIAREASFNA----PLYVPFL 73
Query: 158 DSTWK---TFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVV 214
D+ +K T +E Q L K ++M+ + + +E A L+ + +PVV
Sbjct: 74 DAFFKVPGTGDETQ--LRKILATKAAEIMSSPAITIGPEETIEALATLMYRRRVNPVPVV 131
Query: 215 DADG 218
D +G
Sbjct: 132 DEEG 135
>gi|328952455|ref|YP_004369789.1| hypothetical protein Desac_0728 [Desulfobacca acetoxidans DSM
11109]
gi|328452779|gb|AEB08608.1| CBS domain containing membrane protein [Desulfobacca acetoxidans
DSM 11109]
Length = 151
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 59/127 (46%), Gaps = 15/127 (11%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P T+V + +L + +I G PV+DDD +LVG+++ DL+ RA P V
Sbjct: 15 VTPQTSVLDLARLLAQHKINGTPVVDDDGRLVGVITQTDLI--------DRAKKFQLPHV 66
Query: 158 DSTWKTF------NEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRL 211
+ + +K L K G V D+MT + + ++++ A ++ L
Sbjct: 67 VTILDAHFYLERPSTFRKNLEKMLGNQVADVMTAPAITITPELSVDEVATIMAHRNAHTL 126
Query: 212 PVVDADG 218
PV+ DG
Sbjct: 127 PVLQ-DG 132
>gi|397772010|ref|YP_006539556.1| peptidase M50 [Natrinema sp. J7-2]
gi|448342558|ref|ZP_21531506.1| peptidase M50 [Natrinema gari JCM 14663]
gi|397681103|gb|AFO55480.1| peptidase M50 [Natrinema sp. J7-2]
gi|445625313|gb|ELY78675.1| peptidase M50 [Natrinema gari JCM 14663]
Length = 391
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 36/57 (63%), Gaps = 4/57 (7%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDW----KLVGLVSDYD 136
TVGD MT +LH+V P TTV E + + +R TG+PV+D D +L+GLV+ D
Sbjct: 249 TVGDIMTPASDLHLVDPETTVAELIRRMFTERHTGYPVVDADAFEGERLIGLVTLTD 305
>gi|329938549|ref|ZP_08287974.1| hypothetical protein SGM_3466 [Streptomyces griseoaurantiacus M045]
gi|329302522|gb|EGG46413.1| hypothetical protein SGM_3466 [Streptomyces griseoaurantiacus M045]
Length = 253
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 63/135 (46%), Gaps = 26/135 (19%)
Query: 83 YTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS 142
+TVG MT ++ + TT E + +L RI G PV+D+D K+VG++S DL+ +
Sbjct: 4 HTVGQVMTG--DVVQARRTTPFKELVRLLDRHRIGGLPVVDEDDKVVGVLSGTDLVRAQA 61
Query: 143 ISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARL 202
SGRA P T + DLM+ V V ++ DAARL
Sbjct: 62 -GRSGRA-----PAGAVTAQ------------------DLMSTPAVTVHPEQSVPDAARL 97
Query: 203 LLETKYRRLPVVDAD 217
+ RLPV+D +
Sbjct: 98 MERRGVERLPVIDEE 112
>gi|218885517|ref|YP_002434838.1| signal transduction protein with CBS domains [Desulfovibrio
vulgaris str. 'Miyazaki F']
gi|218756471|gb|ACL07370.1| putative signal transduction protein with CBS domains
[Desulfovibrio vulgaris str. 'Miyazaki F']
Length = 142
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 62/133 (46%), Gaps = 19/133 (14%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
VGD M+T L +K T ++ A ++ RI P++D GL++ D+L+
Sbjct: 4 VGDLMSTG--LFTLKKTDSLRAARSLMQLARIRHIPIVDAKGDFQGLLTHRDILS----- 56
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
A S F +VD + NE+ G VG++M V V T L DAA LLL
Sbjct: 57 ----ATISRFADVDEAVQ--NEIDA------GIPVGEIMRTDVVRVHPDTLLRDAAELLL 104
Query: 205 ETKYRRLPVVDAD 217
KY LPV + D
Sbjct: 105 HHKYGCLPVTEGD 117
>gi|162448320|ref|YP_001610687.1| hypothetical protein sce0051 [Sorangium cellulosum So ce56]
gi|161158902|emb|CAN90207.1| hypothetical protein sce0051 [Sorangium cellulosum So ce56]
Length = 648
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 58/131 (44%), Gaps = 24/131 (18%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TVG FM+T +L V+PT VD A ++ + + PV D+ +LVG+VS LL L +
Sbjct: 513 TVGQFMST--DLFTVRPTDIVDFAASVMAWRHVRHVPVEDEQGRLVGVVSHRALLRLVAR 570
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
+ S P V S +M P PV V T +A R++
Sbjct: 571 GAAAPPSGSAPPTVAS----------------------IMRPDPVTVAPDTPTLEAMRIM 608
Query: 204 LETKYRRLPVV 214
E + LPVV
Sbjct: 609 REHRVGCLPVV 619
>gi|448451851|ref|ZP_21593023.1| peptidase M50 [Halorubrum litoreum JCM 13561]
gi|448483974|ref|ZP_21605911.1| peptidase M50 [Halorubrum arcis JCM 13916]
gi|445810067|gb|EMA60099.1| peptidase M50 [Halorubrum litoreum JCM 13561]
gi|445820458|gb|EMA70278.1| peptidase M50 [Halorubrum arcis JCM 13916]
Length = 394
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 63/135 (46%), Gaps = 30/135 (22%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TV D MT +++LH V T+V + + + E+R TG+PV+D D +LVG+V+ D
Sbjct: 249 TVTDIMTPRDDLHTVSEDTSVADLMGRMFEERHTGYPVLDGD-ELVGMVTLEDA------ 301
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
++ EV++ + + M DL+ P + A + +
Sbjct: 302 ------------------RSVREVERDAYRVDDVMATDLVAADP-----NADALTALQTM 338
Query: 204 LETKYRRLPVVDADG 218
E RLPVVDADG
Sbjct: 339 QEHGVGRLPVVDADG 353
>gi|365893976|ref|ZP_09432141.1| conserved hypothetical protein [Bradyrhizobium sp. STM 3843]
gi|365425300|emb|CCE04683.1| conserved hypothetical protein [Bradyrhizobium sp. STM 3843]
Length = 141
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 62/135 (45%), Gaps = 22/135 (16%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
T G++MT ++ V TTV E E+L +PV D+D ++G+V+ +D+L +
Sbjct: 8 TAGNYMT--RDVKTVTRDTTVRELSEMLDRDDFNSYPVTDND-AVIGIVTKFDMLRCFAF 64
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
+ N M P+ S + V D+MT + VR T L +L+
Sbjct: 65 TQ-----NQMLPQ--------------YSDLMNRKVSDIMTTEFIYVRPDTKLTRVLQLM 105
Query: 204 LETKYRRLPVVDADG 218
+E + R LPV D +
Sbjct: 106 VEHRIRSLPVTDGEN 120
Score = 41.6 bits (96), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 138
V D MTT E V+P T + L+++VE RI PV D + +LVG+++ D++
Sbjct: 81 VSDIMTT--EFIYVRPDTKLTRVLQLMVEHRIRSLPVTDGENRLVGIIAREDIV 132
>gi|313676463|ref|YP_004054459.1| inosine-5'-monophosphate dehydrogenase [Marivirga tractuosa DSM
4126]
gi|312943161|gb|ADR22351.1| inosine-5'-monophosphate dehydrogenase [Marivirga tractuosa DSM
4126]
Length = 490
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 60/124 (48%), Gaps = 34/124 (27%)
Query: 95 LHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMF 154
LH+ +TV +AL+I+ E +I G PV+D + KLVG+V++ DL G+
Sbjct: 104 LHI---ESTVGDALKIMRENKIGGIPVVDSNKKLVGIVTNRDL----RFQKDGKV----- 151
Query: 155 PEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVV 214
V+K++ T+GK+ + E NLE A +L E K +LP++
Sbjct: 152 -----------SVEKVM--TSGKL---------ITAEEGINLEGAEGVLQEHKIEKLPII 189
Query: 215 DADG 218
+ G
Sbjct: 190 NKSG 193
>gi|162451567|ref|YP_001613934.1| hypothetical protein sce3295 [Sorangium cellulosum So ce56]
gi|161162149|emb|CAN93454.1| hypothetical protein sce3295 [Sorangium cellulosum So ce56]
Length = 263
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 78/186 (41%), Gaps = 25/186 (13%)
Query: 42 GCRVFSVLATSSDRVSALRRSSAVFASGT-LTANSAAPSSGVYTVGDFMTTKEELHVVKP 100
G R SV+ +S S + +G + N AP + + T D + + E+
Sbjct: 64 GSRTTSVVCHASHAAPGTEESDPLRNAGVDVAVNPEAPLAEIMT-KDVICIRTEV----- 117
Query: 101 TTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISG--------SGRADNS 152
++D+ +LV I+G PV+D K VG+VS D+L G + R+
Sbjct: 118 --SLDDITALLVRHEISGMPVVDAAGKPVGMVSRADVLRAADERGDTEESRRVASRSGEV 175
Query: 153 MFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLP 212
E+ + + V+ D+MTP V + E+ ++ AA L+ RLP
Sbjct: 176 APLEMSQGFHVYEPVRVTAR--------DVMTPVVVQLHESASIRQAASLMAYEGVHRLP 227
Query: 213 VVDADG 218
VV DG
Sbjct: 228 VVSDDG 233
>gi|239908873|ref|YP_002955615.1| hypothetical protein DMR_42380 [Desulfovibrio magneticus RS-1]
gi|239798740|dbj|BAH77729.1| hypothetical protein [Desulfovibrio magneticus RS-1]
Length = 220
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 60/120 (50%), Gaps = 17/120 (14%)
Query: 99 KPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVD 158
K TT++ +A +++ E PV+DDD +LVG+++D D+ A S +D
Sbjct: 15 KATTSIMKAAKLMKENGYGRLPVVDDDGRLVGIITDRDV---------KEASPSKATTLD 65
Query: 159 STWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADG 218
+E+ LLS+ VGD+MT + V +E AA L+L +PVVDA G
Sbjct: 66 -----MHELYYLLSEIK---VGDIMTKTVISVSPDDTVEKAAVLMLRHNVGGMPVVDAKG 117
Score = 41.2 bits (95), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 27/41 (65%)
Query: 178 MVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADG 218
++ D M+ PV + TT++ AA+L+ E Y RLPVVD DG
Sbjct: 2 LIKDWMSKTPVTAKATTSIMKAAKLMKENGYGRLPVVDDDG 42
>gi|220916635|ref|YP_002491939.1| hypothetical protein A2cp1_1529 [Anaeromyxobacter dehalogenans
2CP-1]
gi|219954489|gb|ACL64873.1| CBS domain containing protein [Anaeromyxobacter dehalogenans 2CP-1]
Length = 147
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 65/135 (48%), Gaps = 20/135 (14%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TVGD+MT ++ ++V EA+ +L EK I PV+ +LVGLV++ L
Sbjct: 7 TVGDWMTKNPI--TIEDESSVIEAIHLLKEKNIRRLPVMRQG-RLVGLVTEKMLFG---- 59
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
P +T + E+ LLSKT V M PAP V T L +AARLL
Sbjct: 60 ---------YMPAKATTLDQW-ELHYLLSKTP---VRAAMNPAPHTVHPDTPLAEAARLL 106
Query: 204 LETKYRRLPVVDADG 218
+ K + VV+A G
Sbjct: 107 HDRKLNGVLVVNAQG 121
>gi|322376938|ref|ZP_08051431.1| CBS domain protein [Streptococcus sp. M334]
gi|321282745|gb|EFX59752.1| CBS domain protein [Streptococcus sp. M334]
Length = 218
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 68/131 (51%), Gaps = 20/131 (15%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT K + + P TTV A +++ E+ + PVI++D +LVGLV++ +
Sbjct: 3 VKDFMTRK--VVYISPDTTVSHAADLMREQGLHRLPVIEND-QLVGLVTEGTI------- 52
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+A S +T + E+ LL+KT V D+M V V +LEDA L+L
Sbjct: 53 --AQASPS-----KATSLSIYEMNYLLNKTK---VKDVMIRDVVTVSGYASLEDATYLML 102
Query: 205 ETKYRRLPVVD 215
+ K LPVVD
Sbjct: 103 KNKIGILPVVD 113
>gi|385675865|ref|ZP_10049793.1| hypothetical protein AATC3_08107 [Amycolatopsis sp. ATCC 39116]
Length = 195
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 53/118 (44%), Gaps = 18/118 (15%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P T+ EA IL + T PV+DDD +LVG+V++ DL+A
Sbjct: 8 VTPGTSAKEAARILSSRGFTALPVVDDDERLVGIVTEADLVA------------------ 49
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVD 215
D + + + G V ++MT + T+L +R LL+ + R +P+ +
Sbjct: 50 DRLPRDPRTHEDRTDRAPGATVAEVMTSPATAMSPGTDLATLSRALLDARIRAMPIAE 107
>gi|430377216|ref|ZP_19431349.1| inosine-5'-monophosphate dehydrogenase [Moraxella macacae 0408225]
gi|429540353|gb|ELA08382.1| inosine-5'-monophosphate dehydrogenase [Moraxella macacae 0408225]
Length = 489
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 56/123 (45%), Gaps = 34/123 (27%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
VKP TV E + + +I+G PVIDD+ K+VG+V+ DL +++S
Sbjct: 100 VKPDATVGELIALTKAHKISGVPVIDDNKKVVGIVTHRDLRFEENLS------------- 146
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAP--VVVRETTNLEDAARLLLETKYRRLPVVD 215
+ V ++MTP V VRE + E+ RLL E + ++ V D
Sbjct: 147 -------------------QPVKNVMTPKEKLVTVREGESTENIKRLLHEHRIEKVIVTD 187
Query: 216 ADG 218
DG
Sbjct: 188 DDG 190
>gi|448509403|ref|ZP_21615700.1| peptidase M50 [Halorubrum distributum JCM 9100]
gi|448525289|ref|ZP_21619605.1| peptidase M50 [Halorubrum distributum JCM 10118]
gi|445696652|gb|ELZ48736.1| peptidase M50 [Halorubrum distributum JCM 9100]
gi|445699831|gb|ELZ51850.1| peptidase M50 [Halorubrum distributum JCM 10118]
Length = 394
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 63/135 (46%), Gaps = 30/135 (22%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TV D MT +++LH V T+V + + + E+R TG+PV+D D +LVG+V+ D
Sbjct: 249 TVTDIMTPRDDLHTVSEDTSVADLMGRMFEERHTGYPVLDGD-ELVGMVTLEDA------ 301
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
++ EV++ + + M DL+ P + A + +
Sbjct: 302 ------------------RSVREVERDAYRVDDVMATDLVAADP-----NADALTALQTM 338
Query: 204 LETKYRRLPVVDADG 218
E RLPVVDADG
Sbjct: 339 QEHGVGRLPVVDADG 353
>gi|398787640|ref|ZP_10549995.1| putative CBS domain-containing protein [Streptomyces auratus
AGR0001]
gi|396992803|gb|EJJ03896.1| putative CBS domain-containing protein [Streptomyces auratus
AGR0001]
Length = 231
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 65/136 (47%), Gaps = 13/136 (9%)
Query: 83 YTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS 142
+ V D MTT + V E +E + +++ PV+ + ++VG+VS+ DLL +
Sbjct: 6 HLVRDVMTTT--VAAVDRAARFKEIIETMERWQVSALPVLAAEGRVVGVVSEADLLPKEE 63
Query: 143 ISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARL 202
S P+ + ++V++ + T G +LMT + VR L AAR+
Sbjct: 64 FRESD-------PDRLEQLRRVDDVRRAEAVTAG----ELMTSPALTVRADATLSQAARV 112
Query: 203 LLETKYRRLPVVDADG 218
+ +RLPVVDA G
Sbjct: 113 MARESVKRLPVVDAHG 128
>gi|307705243|ref|ZP_07642110.1| acetoin utilization protein acuB [Streptococcus mitis SK597]
gi|307621192|gb|EFO00262.1| acetoin utilization protein acuB [Streptococcus mitis SK597]
Length = 218
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 68/131 (51%), Gaps = 20/131 (15%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT K + + P TTV A +++ E+ + PVI++D +LVGLV++ +
Sbjct: 3 VKDFMTRK--VVYISPDTTVSHAADLMREQGLHRLPVIEND-QLVGLVTEGTI------- 52
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+A S +T + E+ LL+KT V D+M V V +LEDA L+L
Sbjct: 53 --AQASPS-----KATSLSIYEMNYLLNKTK---VKDVMIRDVVTVSGYASLEDATYLML 102
Query: 205 ETKYRRLPVVD 215
+ K LPVVD
Sbjct: 103 KNKIGILPVVD 113
>gi|168484842|ref|ZP_02709787.1| AcuB family protein [Streptococcus pneumoniae CDC1873-00]
gi|417695911|ref|ZP_12345091.1| CBS domain pair family protein [Streptococcus pneumoniae GA47368]
gi|418091368|ref|ZP_12728513.1| CBS domain pair family protein [Streptococcus pneumoniae GA44452]
gi|418107133|ref|ZP_12744173.1| CBS domain pair family protein [Streptococcus pneumoniae GA41410]
gi|418109715|ref|ZP_12746744.1| CBS domain pair family protein [Streptococcus pneumoniae GA49447]
gi|418145975|ref|ZP_12782759.1| CBS domain pair family protein [Streptococcus pneumoniae GA13637]
gi|418161790|ref|ZP_12798481.1| CBS domain pair family protein [Streptococcus pneumoniae GA17328]
gi|418168846|ref|ZP_12805492.1| CBS domain pair family protein [Streptococcus pneumoniae GA19077]
gi|418175557|ref|ZP_12812155.1| CBS domain pair family protein [Streptococcus pneumoniae GA41437]
gi|418218491|ref|ZP_12845159.1| CBS domain pair family protein [Streptococcus pneumoniae NP127]
gi|418220675|ref|ZP_12847331.1| CBS domain pair family protein [Streptococcus pneumoniae GA47751]
gi|418238325|ref|ZP_12864881.1| CBS domain pair family protein [Streptococcus pneumoniae
NorthCarolina6A-23]
gi|419422266|ref|ZP_13962485.1| CBS domain protein [Streptococcus pneumoniae GA43264]
gi|419459599|ref|ZP_13999535.1| CBS domain protein [Streptococcus pneumoniae GA02270]
gi|419461879|ref|ZP_14001795.1| CBS domain protein [Streptococcus pneumoniae GA02714]
gi|419481777|ref|ZP_14021571.1| CBS domain protein [Streptococcus pneumoniae GA40563]
gi|419488237|ref|ZP_14027990.1| CBS domain protein [Streptococcus pneumoniae GA44386]
gi|419525497|ref|ZP_14065062.1| CBS domain protein [Streptococcus pneumoniae GA14373]
gi|421206199|ref|ZP_15663263.1| CBS domain pair family protein [Streptococcus pneumoniae 2090008]
gi|421226926|ref|ZP_15683640.1| CBS domain pair family protein [Streptococcus pneumoniae 2072047]
gi|421229400|ref|ZP_15686076.1| CBS domain pair family protein [Streptococcus pneumoniae 2061376]
gi|421238389|ref|ZP_15694958.1| CBS domain pair family protein [Streptococcus pneumoniae 2071247]
gi|421244583|ref|ZP_15701086.1| CBS domain pair family protein [Streptococcus pneumoniae 2081685]
gi|421272396|ref|ZP_15723243.1| CBS domain protein [Streptococcus pneumoniae SPAR55]
gi|421291558|ref|ZP_15742298.1| CBS domain pair family protein [Streptococcus pneumoniae GA56348]
gi|421311501|ref|ZP_15762108.1| CBS domain pair family protein [Streptococcus pneumoniae GA58981]
gi|172041990|gb|EDT50036.1| AcuB family protein [Streptococcus pneumoniae CDC1873-00]
gi|332203908|gb|EGJ17975.1| CBS domain pair family protein [Streptococcus pneumoniae GA47368]
gi|353766741|gb|EHD47281.1| CBS domain pair family protein [Streptococcus pneumoniae GA44452]
gi|353780610|gb|EHD61067.1| CBS domain pair family protein [Streptococcus pneumoniae GA41410]
gi|353785008|gb|EHD65428.1| CBS domain pair family protein [Streptococcus pneumoniae GA49447]
gi|353815543|gb|EHD95759.1| CBS domain pair family protein [Streptococcus pneumoniae GA13637]
gi|353831380|gb|EHE11509.1| CBS domain pair family protein [Streptococcus pneumoniae GA17328]
gi|353836765|gb|EHE16853.1| CBS domain pair family protein [Streptococcus pneumoniae GA19077]
gi|353844117|gb|EHE24161.1| CBS domain pair family protein [Streptococcus pneumoniae GA41437]
gi|353876688|gb|EHE56537.1| CBS domain pair family protein [Streptococcus pneumoniae NP127]
gi|353877544|gb|EHE57387.1| CBS domain pair family protein [Streptococcus pneumoniae GA47751]
gi|353894748|gb|EHE74489.1| CBS domain pair family protein [Streptococcus pneumoniae
NorthCarolina6A-23]
gi|379534471|gb|EHY99683.1| CBS domain protein [Streptococcus pneumoniae GA02270]
gi|379534770|gb|EHY99980.1| CBS domain protein [Streptococcus pneumoniae GA02714]
gi|379559888|gb|EHZ24915.1| CBS domain protein [Streptococcus pneumoniae GA14373]
gi|379581456|gb|EHZ46341.1| CBS domain protein [Streptococcus pneumoniae GA40563]
gi|379589597|gb|EHZ54436.1| CBS domain protein [Streptococcus pneumoniae GA43264]
gi|379590352|gb|EHZ55190.1| CBS domain protein [Streptococcus pneumoniae GA44386]
gi|395577279|gb|EJG37824.1| CBS domain pair family protein [Streptococcus pneumoniae 2090008]
gi|395596904|gb|EJG57113.1| CBS domain pair family protein [Streptococcus pneumoniae 2061376]
gi|395597996|gb|EJG58202.1| CBS domain pair family protein [Streptococcus pneumoniae 2072047]
gi|395602976|gb|EJG63117.1| CBS domain pair family protein [Streptococcus pneumoniae 2071247]
gi|395610241|gb|EJG70320.1| CBS domain pair family protein [Streptococcus pneumoniae 2081685]
gi|395877955|gb|EJG89024.1| CBS domain protein [Streptococcus pneumoniae SPAR55]
gi|395894860|gb|EJH05837.1| CBS domain pair family protein [Streptococcus pneumoniae GA56348]
gi|395912079|gb|EJH22942.1| CBS domain pair family protein [Streptococcus pneumoniae GA58981]
Length = 218
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 68/131 (51%), Gaps = 20/131 (15%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT K + + P TTV A +++ E+ + PVI++D +LVGLV++ +
Sbjct: 3 VKDFMTRK--VVYISPDTTVSHAADLMREQGLHRLPVIEND-QLVGLVTEGTI------- 52
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+A S +T + E+ LL+KT V D+M V V +LEDA L+L
Sbjct: 53 --AQASPS-----KATSLSIYEMNYLLNKTK---VKDVMIRDVVTVSGYASLEDATYLML 102
Query: 205 ETKYRRLPVVD 215
+ K LPVVD
Sbjct: 103 KNKIGILPVVD 113
>gi|225860728|ref|YP_002742237.1| AcuB family protein [Streptococcus pneumoniae Taiwan19F-14]
gi|298255816|ref|ZP_06979402.1| AcuB family protein [Streptococcus pneumoniae str. Canada MDR_19A]
gi|298502539|ref|YP_003724479.1| AcuB family protein [Streptococcus pneumoniae TCH8431/19A]
gi|387787916|ref|YP_006252984.1| acetoin utilization protein AcuB [Streptococcus pneumoniae ST556]
gi|417312325|ref|ZP_12099039.1| CBS domain pair family protein [Streptococcus pneumoniae GA04375]
gi|418082630|ref|ZP_12719832.1| CBS domain pair family protein [Streptococcus pneumoniae GA44288]
gi|418084826|ref|ZP_12722012.1| CBS domain pair family protein [Streptococcus pneumoniae GA47281]
gi|418093594|ref|ZP_12730723.1| CBS domain pair family protein [Streptococcus pneumoniae GA49138]
gi|418100486|ref|ZP_12737574.1| CBS domain pair family protein [Streptococcus pneumoniae 7286-06]
gi|418118690|ref|ZP_12755648.1| CBS domain pair family protein [Streptococcus pneumoniae GA18523]
gi|418141352|ref|ZP_12778165.1| CBS domain pair family protein [Streptococcus pneumoniae GA13455]
gi|418150917|ref|ZP_12787664.1| CBS domain pair family protein [Streptococcus pneumoniae GA14798]
gi|418152491|ref|ZP_12789231.1| CBS domain pair family protein [Streptococcus pneumoniae GA16121]
gi|418157052|ref|ZP_12793768.1| CBS domain pair family protein [Streptococcus pneumoniae GA16833]
gi|418164092|ref|ZP_12800766.1| CBS domain pair family protein [Streptococcus pneumoniae GA17371]
gi|418170966|ref|ZP_12807593.1| CBS domain pair family protein [Streptococcus pneumoniae GA19451]
gi|418198265|ref|ZP_12834725.1| CBS domain pair family protein [Streptococcus pneumoniae GA47778]
gi|418223024|ref|ZP_12849669.1| CBS domain pair family protein [Streptococcus pneumoniae 5185-06]
gi|418227343|ref|ZP_12853962.1| CBS domain pair family protein [Streptococcus pneumoniae 3063-00]
gi|419424785|ref|ZP_13964985.1| CBS domain protein [Streptococcus pneumoniae 7533-05]
gi|419429011|ref|ZP_13969180.1| CBS domain protein [Streptococcus pneumoniae GA11856]
gi|419435629|ref|ZP_13975724.1| CBS domain protein [Streptococcus pneumoniae 8190-05]
gi|419437711|ref|ZP_13977783.1| CBS domain protein [Streptococcus pneumoniae GA13499]
gi|419444365|ref|ZP_13984380.1| CBS domain protein [Streptococcus pneumoniae GA19923]
gi|419446493|ref|ZP_13986498.1| CBS domain protein [Streptococcus pneumoniae 7879-04]
gi|419449058|ref|ZP_13989055.1| CBS domain protein [Streptococcus pneumoniae 4075-00]
gi|419450728|ref|ZP_13990715.1| CBS domain protein [Streptococcus pneumoniae EU-NP02]
gi|419501493|ref|ZP_14041179.1| CBS domain protein [Streptococcus pneumoniae GA47628]
gi|419518558|ref|ZP_14058165.1| CBS domain protein [Streptococcus pneumoniae GA08825]
gi|419527590|ref|ZP_14067134.1| CBS domain protein [Streptococcus pneumoniae GA17719]
gi|421287241|ref|ZP_15738007.1| CBS domain pair family protein [Streptococcus pneumoniae GA58771]
gi|225728031|gb|ACO23882.1| AcuB family protein [Streptococcus pneumoniae Taiwan19F-14]
gi|298238134|gb|ADI69265.1| AcuB family protein [Streptococcus pneumoniae TCH8431/19A]
gi|327390111|gb|EGE88454.1| CBS domain pair family protein [Streptococcus pneumoniae GA04375]
gi|353758067|gb|EHD38660.1| CBS domain pair family protein [Streptococcus pneumoniae GA44288]
gi|353760061|gb|EHD40643.1| CBS domain pair family protein [Streptococcus pneumoniae GA47281]
gi|353765470|gb|EHD46012.1| CBS domain pair family protein [Streptococcus pneumoniae GA49138]
gi|353773195|gb|EHD53694.1| CBS domain pair family protein [Streptococcus pneumoniae 7286-06]
gi|353791391|gb|EHD71769.1| CBS domain pair family protein [Streptococcus pneumoniae GA18523]
gi|353805603|gb|EHD85877.1| CBS domain pair family protein [Streptococcus pneumoniae GA13455]
gi|353814800|gb|EHD95023.1| CBS domain pair family protein [Streptococcus pneumoniae GA14798]
gi|353819136|gb|EHD99334.1| CBS domain pair family protein [Streptococcus pneumoniae GA16121]
gi|353823500|gb|EHE03674.1| CBS domain pair family protein [Streptococcus pneumoniae GA16833]
gi|353832419|gb|EHE12537.1| CBS domain pair family protein [Streptococcus pneumoniae GA17371]
gi|353837136|gb|EHE17222.1| CBS domain pair family protein [Streptococcus pneumoniae GA19451]
gi|353862903|gb|EHE42833.1| CBS domain pair family protein [Streptococcus pneumoniae GA47778]
gi|353880296|gb|EHE60112.1| CBS domain pair family protein [Streptococcus pneumoniae 5185-06]
gi|353882944|gb|EHE62753.1| CBS domain pair family protein [Streptococcus pneumoniae 3063-00]
gi|379137658|gb|AFC94449.1| acetoin utilization protein AcuB [Streptococcus pneumoniae ST556]
gi|379540165|gb|EHZ05339.1| CBS domain protein [Streptococcus pneumoniae GA13499]
gi|379552271|gb|EHZ17361.1| CBS domain protein [Streptococcus pneumoniae GA11856]
gi|379566535|gb|EHZ31523.1| CBS domain protein [Streptococcus pneumoniae GA17719]
gi|379572058|gb|EHZ37015.1| CBS domain protein [Streptococcus pneumoniae GA19923]
gi|379601854|gb|EHZ66626.1| CBS domain protein [Streptococcus pneumoniae GA47628]
gi|379614033|gb|EHZ78743.1| CBS domain protein [Streptococcus pneumoniae 7879-04]
gi|379616406|gb|EHZ81102.1| CBS domain protein [Streptococcus pneumoniae 8190-05]
gi|379620440|gb|EHZ85096.1| CBS domain protein [Streptococcus pneumoniae 7533-05]
gi|379624116|gb|EHZ88749.1| CBS domain protein [Streptococcus pneumoniae 4075-00]
gi|379624627|gb|EHZ89258.1| CBS domain protein [Streptococcus pneumoniae EU-NP02]
gi|379641537|gb|EIA06072.1| CBS domain protein [Streptococcus pneumoniae GA08825]
gi|395889650|gb|EJH00657.1| CBS domain pair family protein [Streptococcus pneumoniae GA58771]
Length = 218
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 70/138 (50%), Gaps = 24/138 (17%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT K + + P TTV A +++ E+ + PVI++D +LVGLV++ +
Sbjct: 3 VKDFMTRK--VVYISPDTTVSHAADLMREQGLHRLPVIEND-QLVGLVTEGTI------- 52
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+A S +T + E+ LL+KT V D+M V V +LEDA L+L
Sbjct: 53 --AQASPS-----KATSLSIYEMNYLLNKTK---VKDVMIRDVVTVSGYASLEDATYLML 102
Query: 205 ETKYRRLPVVDADGWNYH 222
+ K LPVVD NY
Sbjct: 103 KNKIGILPVVD----NYQ 116
>gi|421208584|ref|ZP_15665609.1| CBS domain pair family protein [Streptococcus pneumoniae 2070005]
gi|421224607|ref|ZP_15681353.1| CBS domain pair family protein [Streptococcus pneumoniae 2070768]
gi|395577054|gb|EJG37608.1| CBS domain pair family protein [Streptococcus pneumoniae 2070005]
gi|395591943|gb|EJG52238.1| CBS domain pair family protein [Streptococcus pneumoniae 2070768]
Length = 218
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 68/131 (51%), Gaps = 20/131 (15%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT K + + P TTV A +++ E+ + PVI++D +LVGLV++ +
Sbjct: 3 VKDFMTRK--VVYISPDTTVSHAADLMREQGLHRLPVIEND-QLVGLVTEGTI------- 52
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+A S +T + E+ LL+KT V D+M V V +LEDA L+L
Sbjct: 53 --AQASPS-----KATSLSIYEMNYLLNKTK---VKDVMIRDVVTVSGYASLEDATYLML 102
Query: 205 ETKYRRLPVVD 215
+ K LPVVD
Sbjct: 103 KNKIGILPVVD 113
>gi|197121843|ref|YP_002133794.1| hypothetical protein AnaeK_1434 [Anaeromyxobacter sp. K]
gi|196171692|gb|ACG72665.1| CBS domain containing protein [Anaeromyxobacter sp. K]
Length = 147
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 65/135 (48%), Gaps = 20/135 (14%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TVGD+MT ++ ++V EA+ +L EK I PV+ +LVGLV++ L
Sbjct: 7 TVGDWMTKNPI--TIEDESSVIEAIHLLKEKNIRRLPVMRQG-RLVGLVTEKMLFG---- 59
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
P +T + E+ LLSKT V M PAP V T L +AARLL
Sbjct: 60 ---------YMPAKATTLDQW-ELHYLLSKTP---VRAAMNPAPHTVHPDTPLAEAARLL 106
Query: 204 LETKYRRLPVVDADG 218
+ K + VV+A G
Sbjct: 107 HDRKLNGVLVVNAQG 121
>gi|197119665|ref|YP_002140092.1| hypothetical protein [Geobacter bemidjiensis Bem]
gi|197089025|gb|ACH40296.1| CBS domain pair-containing protein [Geobacter bemidjiensis Bem]
Length = 216
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 58/120 (48%), Gaps = 17/120 (14%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
+ P +V EAL ++ +K+I PV++ KLVG+VSD DL + A
Sbjct: 14 ITPDISVTEALRLMGDKKIRRLPVVERTGKLVGIVSDRDLFQASPSPATSLA-------- 65
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
W E+ LL+K V M + V E T LE+AAR++++ + LPV+ D
Sbjct: 66 --IW----EIHDLLAKLT---VDKTMATDVITVTEDTPLEEAARVMVDRRIGGLPVMKGD 116
Score = 37.0 bits (84), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 54/114 (47%), Gaps = 9/114 (7%)
Query: 75 SAAPSSGVYTVGDFM-------TTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWK 127
S A S ++ + D + T ++ V T ++EA ++V++RI G PV+ D
Sbjct: 59 SPATSLAIWEIHDLLAKLTVDKTMATDVITVTEDTPLEEAARVMVDRRIGGLPVMKGD-A 117
Query: 128 LVGLVSDYDLL-ALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVG 180
LVG++++ DL AL + G R + T +V + + + G +VG
Sbjct: 118 LVGIITESDLFQALLELLGGRRHGVRLTVTTTGAKGTLADVAQTIYQAGGDIVG 171
>gi|92117441|ref|YP_577170.1| hypothetical protein Nham_1902 [Nitrobacter hamburgensis X14]
gi|91800335|gb|ABE62710.1| CBS domain containing membrane protein [Nitrobacter hamburgensis
X14]
Length = 231
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 63/120 (52%), Gaps = 13/120 (10%)
Query: 103 TVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWK 162
TV + +IL+EKRI+ PV+D+ K++G+V++ DL+ + +G+ R S W
Sbjct: 19 TVRDVAKILLEKRISAVPVVDNVGKVIGIVTESDLMH-RAEAGTERP--------YSWWV 69
Query: 163 TFNEVQKLLS----KTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADG 218
F ++ K++ + D+MT V T L + A L E + +R+P+V+ DG
Sbjct: 70 HFLAGDATMAADYVKSHATRIEDVMTTDVVTATPETLLHEIAMLFEERQIKRVPIVNNDG 129
>gi|328954414|ref|YP_004371748.1| signal transduction protein with CBS domains [Desulfobacca
acetoxidans DSM 11109]
gi|328454738|gb|AEB10567.1| putative signal transduction protein with CBS domains [Desulfobacca
acetoxidans DSM 11109]
Length = 426
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 63/135 (46%), Gaps = 16/135 (11%)
Query: 90 TTKEELHVVKP-----TTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
T EL ++P T++ E +L+ TG PV+D + VG++S DL+ +
Sbjct: 116 TQVRELMTLQPRKVNLETSLAEVTRLLLSSTFTGLPVVDAEKHPVGVISQTDLIYKAGMP 175
Query: 145 GS-GRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
G S +VD+ +L + ++MT V + + + +A L+
Sbjct: 176 MRLGLLSESADEKVDA----------VLEALGSRQAREIMTKPAVTIGQEQRVTEAVNLM 225
Query: 204 LETKYRRLPVVDADG 218
LE K +RLPVVDA+G
Sbjct: 226 LEKKVKRLPVVDAEG 240
Score = 45.8 bits (107), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 62/136 (45%), Gaps = 8/136 (5%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D M + E V P T V+E + ++ I V+D +GL+SD DLL +
Sbjct: 278 VSDIM--RRETTTVLPETPVEEVIRLIDCGDIQRVCVVDQQGNFLGLISDRDLLVAFADR 335
Query: 145 GSGRADN--SMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARL 202
G D S P + + +Q+ L K ++M + + E + +A RL
Sbjct: 336 HPGIWDYFVSKLPFTERR-RRHKHLQRHLEV---KTASEVMNTHIITIEEDAPINEAIRL 391
Query: 203 LLETKYRRLPVVDADG 218
+LE +RLPV+DA G
Sbjct: 392 MLENCIKRLPVLDAQG 407
Score = 43.9 bits (102), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 58/115 (50%), Gaps = 15/115 (13%)
Query: 104 VDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKT 163
V EA+ +++EK++ PV+D + KLVG +S D+ +S+ E W+T
Sbjct: 218 VTEAVNLMLEKKVKRLPVVDAEGKLVGNLSRVDIF------------HSILRECPD-WQT 264
Query: 164 FNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADG 218
F + QK ++ N + V D+M V T +E+ RL+ +R+ VVD G
Sbjct: 265 FQK-QK-INVENLRFVSDIMRRETTTVLPETPVEEVIRLIDCGDIQRVCVVDQQG 317
>gi|326781239|ref|ZP_08240504.1| CBS domain containing membrane protein [Streptomyces griseus
XylebKG-1]
gi|326661572|gb|EGE46418.1| CBS domain containing membrane protein [Streptomyces griseus
XylebKG-1]
Length = 207
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 58/114 (50%), Gaps = 14/114 (12%)
Query: 106 EALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFN 165
+ +E++ E +++ PV+ + ++VG+VS+ DLL ++ G + ++D +K
Sbjct: 27 QVVELMSESKVSALPVLAGEGRVVGVVSEADLLPKEAFREGGPPAAA---QLDEAFKA-- 81
Query: 166 EVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGW 219
+V DLM+ V V + +AAR++ +RLPVV+++G
Sbjct: 82 ---------AAVLVEDLMSSPAVTVHPDAPIAEAARIMARKHVKRLPVVNSEGL 126
>gi|448475853|ref|ZP_21603208.1| peptidase M50 [Halorubrum aidingense JCM 13560]
gi|445816071|gb|EMA65980.1| peptidase M50 [Halorubrum aidingense JCM 13560]
Length = 393
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 49/84 (58%), Gaps = 9/84 (10%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TVGD MT +EELH V T+V E ++ + E+R TG+PV+ + LVG+V+ D ++ +
Sbjct: 249 TVGDVMTPREELHTVTEDTSVSELMQRMFEERHTGYPVLHGE-DLVGMVTLEDARSVRDV 307
Query: 144 S------GSGRADN--SMFPEVDS 159
G ADN ++ P VD+
Sbjct: 308 ERDAYRVGEVMADNVVAIGPHVDA 331
>gi|424787304|ref|ZP_18214072.1| CBS domain protein [Streptococcus intermedius BA1]
gi|422114067|gb|EKU17785.1| CBS domain protein [Streptococcus intermedius BA1]
Length = 218
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 69/131 (52%), Gaps = 20/131 (15%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT K + + P TTV A +I+ + + PVI++D +LVGLV++ +I+
Sbjct: 3 VKDFMTRK--VVYISPDTTVAHAADIMRAQELHRLPVIEND-QLVGLVTE------GTIA 53
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+ + +T + E+ LL+KT K D+M V V + +LEDA L+L
Sbjct: 54 EASPSK--------ATSLSIYEMNYLLNKTKIK---DIMIRDVVTVSQFASLEDATYLML 102
Query: 205 ETKYRRLPVVD 215
+ K LPVVD
Sbjct: 103 KNKIGILPVVD 113
>gi|383938426|ref|ZP_09991637.1| CBS domain protein [Streptococcus pseudopneumoniae SK674]
gi|383714635|gb|EID70630.1| CBS domain protein [Streptococcus pseudopneumoniae SK674]
Length = 218
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 68/131 (51%), Gaps = 20/131 (15%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT K + + P TTV A +++ E+ + PVI++D +LVGLV++ +
Sbjct: 3 VKDFMTRK--VVYISPDTTVSHAADLMREQGLHRLPVIEND-QLVGLVTEGTI------- 52
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+A S +T + E+ LL+KT V D+M V V +LEDA L+L
Sbjct: 53 --AQASPS-----KATSLSIYEMNYLLNKTK---VKDVMIRDVVTVSGYASLEDATYLML 102
Query: 205 ETKYRRLPVVD 215
+ K LPVVD
Sbjct: 103 KNKIGILPVVD 113
>gi|417924144|ref|ZP_12567596.1| CBS domain protein [Streptococcus mitis SK569]
gi|342836198|gb|EGU70414.1| CBS domain protein [Streptococcus mitis SK569]
Length = 218
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 68/131 (51%), Gaps = 20/131 (15%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT K + + P TTV A +++ E+ + PVI++D +LVGLV++ +
Sbjct: 3 VKDFMTRK--VVYISPDTTVSHAADLMREQGLHRLPVIEND-QLVGLVTEGTI------- 52
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+A S +T + E+ LL+KT V D+M V V +LEDA L+L
Sbjct: 53 --AQASPS-----KATSLSIYEMNYLLNKTK---VKDVMIRDVVTVSGYASLEDATYLML 102
Query: 205 ETKYRRLPVVD 215
+ K LPVVD
Sbjct: 103 KNKIGILPVVD 113
>gi|289168243|ref|YP_003446512.1| hypothetical protein smi_1410 [Streptococcus mitis B6]
gi|288907810|emb|CBJ22650.1| conserved hypothetical protein [Streptococcus mitis B6]
Length = 218
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 68/131 (51%), Gaps = 20/131 (15%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT K + + P TTV A +++ E+ + PVI++D +LVGLV++ +
Sbjct: 3 VKDFMTRK--VVYISPDTTVSHAADLMREQGLHRLPVIEND-QLVGLVTEGTI------- 52
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+A S +T + E+ LL+KT V D+M V V +LEDA L+L
Sbjct: 53 --AQASPS-----KATSLSIYEMNYLLNKTK---VKDVMIRDVVTVSGYASLEDATYLML 102
Query: 205 ETKYRRLPVVD 215
+ K LPVVD
Sbjct: 103 KNKIGILPVVD 113
>gi|46190448|ref|ZP_00121474.2| COG0477: Permeases of the major facilitator superfamily
[Bifidobacterium longum DJO10A]
gi|189439522|ref|YP_001954603.1| major facilitator superfamily permease [Bifidobacterium longum
DJO10A]
gi|189427957|gb|ACD98105.1| permease of the major facilitator superfamily [Bifidobacterium
longum DJO10A]
Length = 683
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 56/110 (50%), Gaps = 6/110 (5%)
Query: 111 LVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNE--VQ 168
+ ++ PV++ D +LVG VSD D+L S + ++ ST F++ V
Sbjct: 553 FIRLNVSSLPVVNGDGRLVGFVSDGDVLK----SIATYESRTVSTGTGSTMVVFDDETVA 608
Query: 169 KLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADG 218
+ +GK V D+ T V ++ + AR+L + ++++LPVVD DG
Sbjct: 609 SKVQALSGKKVMDIATRKVVAATPDQHVGEVARILAKKQFKKLPVVDGDG 658
>gi|322418648|ref|YP_004197871.1| hypothetical protein GM18_1120 [Geobacter sp. M18]
gi|320125035|gb|ADW12595.1| CBS domain containing membrane protein [Geobacter sp. M18]
Length = 149
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 66/136 (48%), Gaps = 16/136 (11%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGS 146
+ MTT ++ V+ TTV + ++ E+RI+ PV+DD+ LVG+VS+ DL+ D
Sbjct: 6 EIMTT--DVITVRRDTTVRDLAKLFAERRISSVPVVDDEGLLVGIVSESDLIEQDK---- 59
Query: 147 GRADNSMFPEVDST--WKTFNE----VQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAA 200
P V S W + E +K L K G+ VGD+ + V + + A
Sbjct: 60 ----PLHIPTVISIFDWVIYLESDKRFEKELQKMTGQTVGDIYSQDVACVGPDAPVSEVA 115
Query: 201 RLLLETKYRRLPVVDA 216
++ K + +PVV+
Sbjct: 116 EIMTSKKVQAVPVVEG 131
>gi|333911316|ref|YP_004485049.1| signal transduction protein with CBS domains [Methanotorris igneus
Kol 5]
gi|333751905|gb|AEF96984.1| putative signal transduction protein with CBS domains
[Methanotorris igneus Kol 5]
Length = 153
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 65/125 (52%), Gaps = 10/125 (8%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPE- 156
V P + + + + E +I+G PV++D KLVG++S+ D++ +I+ + + P
Sbjct: 14 VNPDDDIRDVIRLFREHKISGAPVVED-GKLVGIISESDIVK--TITTHNESIGLILPSP 70
Query: 157 ---VDSTWKT---FNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRR 210
++ KT E ++ + K V D+MT + + + DAA+L++E +R
Sbjct: 71 LDLIELPLKTTLKIEEFKEDIKKALKTKVKDVMTKDVITISPDETINDAAKLMIENNIKR 130
Query: 211 LPVVD 215
LPVV+
Sbjct: 131 LPVVE 135
>gi|347731091|ref|ZP_08864196.1| CBS domain pair family protein [Desulfovibrio sp. A2]
gi|347520105|gb|EGY27245.1| CBS domain pair family protein [Desulfovibrio sp. A2]
Length = 142
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 62/131 (47%), Gaps = 19/131 (14%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
VGD M+T L +K T ++ A ++ RI P++D GL++ D+L+
Sbjct: 4 VGDLMSTG--LFTLKKTDSLRAARSLMQLARIRHIPIVDAKGDFQGLLTHRDILS----- 56
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
A S F +VD + NE+ +G VG++M V V T L DAA LLL
Sbjct: 57 ----ATISRFADVDEAVQ--NEID------SGIPVGEIMRTDVVCVHPGTLLRDAAELLL 104
Query: 205 ETKYRRLPVVD 215
KY LPV +
Sbjct: 105 HHKYGCLPVTE 115
>gi|342163426|ref|YP_004768065.1| CBS domain-containing protein [Streptococcus pseudopneumoniae
IS7493]
gi|417850178|ref|ZP_12496093.1| CBS domain protein [Streptococcus mitis SK1080]
gi|418102469|ref|ZP_12739545.1| CBS domain pair family protein [Streptococcus pneumoniae NP070]
gi|419475146|ref|ZP_14014987.1| CBS domain protein [Streptococcus pneumoniae GA14688]
gi|419486256|ref|ZP_14026023.1| CBS domain protein [Streptococcus pneumoniae GA44128]
gi|339455511|gb|EGP68118.1| CBS domain protein [Streptococcus mitis SK1080]
gi|341933308|gb|AEL10205.1| CBS domain protein [Streptococcus pseudopneumoniae IS7493]
gi|353776635|gb|EHD57110.1| CBS domain pair family protein [Streptococcus pneumoniae NP070]
gi|379561484|gb|EHZ26501.1| CBS domain protein [Streptococcus pneumoniae GA14688]
gi|379589165|gb|EHZ54005.1| CBS domain protein [Streptococcus pneumoniae GA44128]
Length = 218
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 68/131 (51%), Gaps = 20/131 (15%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT K + + P TTV A +++ E+ + PVI++D +LVGLV++ +
Sbjct: 3 VKDFMTRK--VVYISPDTTVSHAADLMREQGLHRLPVIEND-QLVGLVTEGTI------- 52
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+A S +T + E+ LL+KT V D+M V V +LEDA L+L
Sbjct: 53 --AQASPS-----KATSLSIYEMNYLLNKTK---VKDVMIRDVVTVSGYASLEDATYLML 102
Query: 205 ETKYRRLPVVD 215
+ K LPVVD
Sbjct: 103 KNKIGILPVVD 113
>gi|291456610|ref|ZP_06596000.1| lincomycin resistance protein LmrB [Bifidobacterium breve DSM 20213
= JCM 1192]
gi|417943311|ref|ZP_12586561.1| Lincomycin resistance protein LmrB [Bifidobacterium breve CECT
7263]
gi|291381887|gb|EFE89405.1| lincomycin resistance protein LmrB [Bifidobacterium breve DSM 20213
= JCM 1192]
gi|376165621|gb|EHS84569.1| Lincomycin resistance protein LmrB [Bifidobacterium breve CECT
7263]
Length = 692
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 56/110 (50%), Gaps = 6/110 (5%)
Query: 111 LVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNE--VQ 168
+ ++ PV++ D +LVG VSD D+L S + ++ ST F++ V
Sbjct: 562 FIRLNVSSLPVVNGDGRLVGFVSDGDVLK----SIATYESRTVSTGTGSTMVVFDDETVA 617
Query: 169 KLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADG 218
+ +GK V D+ T V ++ + AR+L + ++++LPVVD DG
Sbjct: 618 SKVQALSGKKVMDIATRKVVAATPDQHVGEVARILAKKQFKKLPVVDGDG 667
>gi|307702036|ref|ZP_07639044.1| AcuB family protein [Streptococcus mitis NCTC 12261]
gi|307616681|gb|EFN95870.1| AcuB family protein [Streptococcus mitis NCTC 12261]
Length = 218
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 68/131 (51%), Gaps = 20/131 (15%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT K + + P TTV A +++ E+ + PVI++D +LVGLV++ +
Sbjct: 3 VKDFMTRK--VVYISPDTTVSHAADLMREQGLHRLPVIEND-QLVGLVTEGTI------- 52
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+A S +T + E+ LL+KT V D+M V V +LEDA L+L
Sbjct: 53 --AQASPS-----KATSLSIYEMNYLLNKTK---VKDVMIRDVVTVSGYASLEDATYLML 102
Query: 205 ETKYRRLPVVD 215
+ K LPVVD
Sbjct: 103 KNKIGILPVVD 113
>gi|16263041|ref|NP_435834.1| hypothetical protein SMa1086 [Sinorhizobium meliloti 1021]
gi|433616399|ref|YP_007193194.1| CBS-domain-containing membrane protein [Sinorhizobium meliloti GR4]
gi|14523696|gb|AAK65246.1| Conserved hypothetical protein [Sinorhizobium meliloti 1021]
gi|429554646|gb|AGA09595.1| CBS-domain-containing membrane protein [Sinorhizobium meliloti GR4]
Length = 224
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 62/131 (47%), Gaps = 12/131 (9%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGS 146
D M K+ + + P +V A ++E +I+G PV DD +LVG++S+ DLL +
Sbjct: 5 DIM--KKRVLSISPDHSVSHAARAMLENQISGLPVCDDRGRLVGMLSEGDLLRRAELGLV 62
Query: 147 GRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLET 206
R D V + + F K + VGD+MT V V E + A L+
Sbjct: 63 SRRD---IAGVRAKPEAF-------IKGHSWRVGDVMTQPVVTVDEDMPVGRVAELMAAK 112
Query: 207 KYRRLPVVDAD 217
+R+PV+ A+
Sbjct: 113 GIKRIPVMRAE 123
>gi|384197111|ref|YP_005582855.1| drug resistance MFS transporter, drug:H+ antiporter-2 family
[Bifidobacterium breve ACS-071-V-Sch8b]
gi|333109832|gb|AEF26848.1| drug resistance MFS transporter, drug:H+ antiporter-2 family
[Bifidobacterium breve ACS-071-V-Sch8b]
Length = 683
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 56/110 (50%), Gaps = 6/110 (5%)
Query: 111 LVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNE--VQ 168
+ ++ PV++ D +LVG VSD D+L S + ++ ST F++ V
Sbjct: 553 FIRLNVSSLPVVNGDGRLVGFVSDGDVLK----SIATYESRTVSTGTGSTMVVFDDETVA 608
Query: 169 KLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADG 218
+ +GK V D+ T V ++ + AR+L + ++++LPVVD DG
Sbjct: 609 SKVQALSGKKVMDIATRKVVAATPDQHVGEVARILAKKQFKKLPVVDGDG 658
>gi|91773709|ref|YP_566401.1| CBS domain-containing protein [Methanococcoides burtonii DSM 6242]
gi|91712724|gb|ABE52651.1| Cystathionine beta-synthase domain-containing protein
[Methanococcoides burtonii DSM 6242]
Length = 315
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 70/134 (52%), Gaps = 18/134 (13%)
Query: 86 GDFMTTKEELHVVK--PTTTVDEALEILVEKRITGFPVIDDDW-KLVGLVSDYDLLALDS 142
GD M+ + HV+ PTT + +A++I+ EK+ P+ + K+ G+++ +D++ D
Sbjct: 41 GDIMSVATK-HVITIPPTTKIIDAIKIMTEKKFRHIPITNAGTNKIEGIITSFDII--DF 97
Query: 143 ISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARL 202
+ G D S +++ +K LL+ N + +M P V + T N+++A L
Sbjct: 98 LGG----DKSQL--IENKYK-----GNLLAAINAN-ISSIMQPHVVSIHSTGNIKEAFEL 145
Query: 203 LLETKYRRLPVVDA 216
+L+ LPVVD+
Sbjct: 146 MLKHNIGSLPVVDS 159
>gi|332158567|ref|YP_004423846.1| inosine 5'-monophosphate dehydrogenase [Pyrococcus sp. NA2]
gi|331034030|gb|AEC51842.1| inosine 5'-monophosphate dehydrogenase [Pyrococcus sp. NA2]
Length = 485
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 61/126 (48%), Gaps = 35/126 (27%)
Query: 93 EELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNS 152
E++ + P T+D AL ++ + I G PV++ D ++VG+++ D+ A +
Sbjct: 101 EDVITIAPDETIDYALFLMEKHGIDGLPVVEGD-RVVGIITKKDIAARE----------- 148
Query: 153 MFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLP 212
G+ V +LMT + V E+ ++E+A ++++E + RLP
Sbjct: 149 -----------------------GRTVKELMTREVITVPESVDVEEALKIMMENRIDRLP 185
Query: 213 VVDADG 218
VV+ DG
Sbjct: 186 VVNEDG 191
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 69 GTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKL 128
G +T A G TV + MT E+ V + V+EAL+I++E RI PV+++D KL
Sbjct: 137 GIITKKDIAAREG-RTVKELMT--REVITVPESVDVEEALKIMMENRIDRLPVVNEDGKL 193
Query: 129 VGLVSDYDLLA 139
VGL++ DL+A
Sbjct: 194 VGLITMSDLVA 204
>gi|307706956|ref|ZP_07643755.1| acetoin utilization protein acuB [Streptococcus mitis SK321]
gi|307617670|gb|EFN96838.1| acetoin utilization protein acuB [Streptococcus mitis SK321]
Length = 218
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 68/131 (51%), Gaps = 20/131 (15%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT K + + P TTV A +++ E+ + PVI++D +LVGLV++ +
Sbjct: 3 VKDFMTRK--VVYISPDTTVSHAADLMREQGLHRLPVIEND-QLVGLVTEGTI------- 52
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+A S +T + E+ LL+KT V D+M V V +LEDA L+L
Sbjct: 53 --AQASPS-----KATSLSIYEMNYLLNKTK---VKDVMIRDVVTVSGYASLEDATYLML 102
Query: 205 ETKYRRLPVVD 215
+ K LPVVD
Sbjct: 103 KNKIGILPVVD 113
>gi|374287258|ref|YP_005034343.1| hypothetical protein BMS_0457 [Bacteriovorax marinus SJ]
gi|301165799|emb|CBW25371.1| conserved hypothetical protein [Bacteriovorax marinus SJ]
Length = 153
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 68/133 (51%), Gaps = 7/133 (5%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS-I 143
V +FMT +++ TV+EA +I+ +K + PV+D LVG++++ D + D+ I
Sbjct: 7 VSEFMT--KDVISCTEENTVEEAAKIMHDKGFSVMPVVDGAGALVGILTESDFVGTDANI 64
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
+ + +F + F++ +++ K+ K +G++MT V +L D ++
Sbjct: 65 PHALASIKKLFGQ----NFYFSDAEEIYKKSKAKKLGEVMTKDVTTVTSDQSLSDVISVM 120
Query: 204 LETKYRRLPVVDA 216
+RLPVVD
Sbjct: 121 SHNHLKRLPVVDG 133
>gi|418977932|ref|ZP_13525739.1| CBS domain protein [Streptococcus mitis SK575]
gi|383349133|gb|EID27083.1| CBS domain protein [Streptococcus mitis SK575]
Length = 218
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 68/131 (51%), Gaps = 20/131 (15%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT K + + P TTV A +++ E+ + PVI++D +LVGLV++ +
Sbjct: 3 VKDFMTRK--VVYISPDTTVSHAADLMREQGLHRLPVIEND-QLVGLVTEGTI------- 52
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+A S +T + E+ LL+KT V D+M V V +LEDA L+L
Sbjct: 53 --AQASPS-----KATSLSIYEMNYLLNKTK---VKDVMIRDVVTVSGYASLEDATYLML 102
Query: 205 ETKYRRLPVVD 215
+ K LPVVD
Sbjct: 103 KNKIGILPVVD 113
>gi|418967448|ref|ZP_13519111.1| CBS domain protein [Streptococcus mitis SK616]
gi|419766389|ref|ZP_14292593.1| CBS domain protein [Streptococcus mitis SK579]
gi|383344061|gb|EID22231.1| CBS domain protein [Streptococcus mitis SK616]
gi|383354125|gb|EID31701.1| CBS domain protein [Streptococcus mitis SK579]
Length = 218
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 68/131 (51%), Gaps = 20/131 (15%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT K + + P TTV A +++ E+ + PVI++D +LVGLV++ +
Sbjct: 3 VKDFMTRK--VVYISPDTTVSHAADLMREQGLHRLPVIEND-QLVGLVTEGTI------- 52
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+A S +T + E+ LL+KT V D+M V V +LEDA L+L
Sbjct: 53 --AQASPS-----KATSLSIYEMNYLLNKTK---VKDVMIRDVVTVSGYASLEDATYLML 102
Query: 205 ETKYRRLPVVD 215
+ K LPVVD
Sbjct: 103 KNKIGILPVVD 113
>gi|312132929|ref|YP_004000268.1| permease of the major facilitator superfamily [Bifidobacterium
longum subsp. longum BBMN68]
gi|311773905|gb|ADQ03393.1| Permease of the major facilitator superfamily [Bifidobacterium
longum subsp. longum BBMN68]
Length = 683
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 56/110 (50%), Gaps = 6/110 (5%)
Query: 111 LVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNE--VQ 168
+ ++ PV++ D +LVG VSD D+L S + ++ ST F++ V
Sbjct: 553 FIRLNVSSLPVVNGDGRLVGFVSDGDVLK----SIATYESRTVSTGTGSTMVVFDDETVA 608
Query: 169 KLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADG 218
+ +GK V D+ T V ++ + AR+L + ++++LPVVD DG
Sbjct: 609 SKVQALSGKKVMDIATRKVVAATPDQHVGEVARILAKKQFKKLPVVDGDG 658
>gi|242278922|ref|YP_002991051.1| hypothetical protein Desal_1450 [Desulfovibrio salexigens DSM 2638]
gi|242121816|gb|ACS79512.1| CBS domain containing protein [Desulfovibrio salexigens DSM 2638]
Length = 226
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 64/140 (45%), Gaps = 30/140 (21%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL------ 138
VGD+MT EE+ + P + +A+E++ + I PV + +VG+VSD D+
Sbjct: 3 VGDWMT--EEVLTLMPGAPIIDAMEMMRDAGIRQIPVTEASGLVVGIVSDRDVRDAMPSK 60
Query: 139 ALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLED 198
L + +G+ D M G + D+MT P +V T +E
Sbjct: 61 FLPGDNAAGKGDGLM----------------------GLKIKDIMTHDPYIVSPDTCMEV 98
Query: 199 AARLLLETKYRRLPVVDADG 218
AA +LLE K LPVVD G
Sbjct: 99 AAEILLEKKIGGLPVVDEFG 118
>gi|270208642|ref|YP_003329413.1| hypothetical protein pSmeSM11ap115 [Sinorhizobium meliloti]
gi|76880916|gb|ABA56086.1| conserved hypothetical protein [Sinorhizobium meliloti]
Length = 224
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 63/137 (45%), Gaps = 24/137 (17%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL---ALDSI 143
D M K+++ + P V A ++E +I+G PV DD +LVG++S+ DLL L S+
Sbjct: 5 DIM--KKKVLSISPDHGVRHAARTMLENQISGLPVCDDRGRLVGILSEGDLLRRAELGSV 62
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQ---KLLSKTNGKMVGDLMTPAPVVVRETTNLEDAA 200
S W+ V+ + K + VGDLMT V V E + A
Sbjct: 63 S----------------WRDIAAVRTKPEAFIKGHSWRVGDLMTQPVVTVDEGMPVGRVA 106
Query: 201 RLLLETKYRRLPVVDAD 217
L+ +R PV+ A+
Sbjct: 107 ELMAAKGIKRTPVMRAE 123
>gi|320353215|ref|YP_004194554.1| hypothetical protein Despr_1091 [Desulfobulbus propionicus DSM
2032]
gi|320121717|gb|ADW17263.1| CBS domain containing membrane protein [Desulfobulbus propionicus
DSM 2032]
Length = 151
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 68/138 (49%), Gaps = 17/138 (12%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGS 146
D MT E+ V T+V E +L+ +I+G PV+D+ K++G+V++ DL+
Sbjct: 6 DIMT--REVITVNARTSVRELAALLLSHKISGAPVVDEAGKVIGVVTESDLIF------- 56
Query: 147 GRADNSMFPEVDSTWKTF------NEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAA 200
+ P + F + +++ L K G VGD+ + + V T+LE+ A
Sbjct: 57 -QNKKVHLPTAFAILDAFVFLEPPDRMKEELRKMAGTRVGDICSTPLISVGPETDLEELA 115
Query: 201 RLLLETKYRRLPVVDADG 218
L+ E K LPV+ A+G
Sbjct: 116 TLMAEKKMHTLPVM-AEG 132
>gi|387626131|ref|YP_006062303.1| hypothetical protein INV104_06260 [Streptococcus pneumoniae INV104]
gi|417693680|ref|ZP_12342869.1| CBS domain pair family protein [Streptococcus pneumoniae GA47901]
gi|444383946|ref|ZP_21182119.1| CBS domain protein [Streptococcus pneumoniae PCS8106]
gi|444385509|ref|ZP_21183582.1| CBS domain protein [Streptococcus pneumoniae PCS8203]
gi|301793913|emb|CBW36309.1| conserved hypothetical protein [Streptococcus pneumoniae INV104]
gi|332204763|gb|EGJ18828.1| CBS domain pair family protein [Streptococcus pneumoniae GA47901]
gi|444247866|gb|ELU54393.1| CBS domain protein [Streptococcus pneumoniae PCS8106]
gi|444250111|gb|ELU56595.1| CBS domain protein [Streptococcus pneumoniae PCS8203]
Length = 218
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 68/131 (51%), Gaps = 20/131 (15%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT K + + P TTV A +++ E+ + PVI++D +LVGLV++ +
Sbjct: 3 VKDFMTRK--VVYISPDTTVSHAADLMREQGLHRLPVIEND-QLVGLVTEGTI------- 52
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+A S +T + E+ LL+KT V D+M V V +LEDA L+L
Sbjct: 53 --AQASPS-----KATSLSIYEMNYLLNKTK---VKDVMIRDVVTVSGYASLEDATYLML 102
Query: 205 ETKYRRLPVVD 215
+ K LPVVD
Sbjct: 103 KNKIGILPVVD 113
>gi|344203160|ref|YP_004788303.1| hypothetical protein [Muricauda ruestringensis DSM 13258]
gi|343955082|gb|AEM70881.1| CBS domain containing membrane protein [Muricauda ruestringensis
DSM 13258]
Length = 153
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 66/131 (50%), Gaps = 25/131 (19%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D+MT +L P +++E +E L+ +I+G PV++++ +L+G++S+ D + IS
Sbjct: 22 VSDYMT--RDLITFSPDQSIEEVIEALIRHKISGGPVVNENNELIGIISEGD--CIKHIS 77
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
S + M SK +M+ ++ T + N+ DAA++ L
Sbjct: 78 DSRYYNLPMEH----------------SKVELRMIKNVET-----IDGNMNIFDAAKMFL 116
Query: 205 ETKYRRLPVVD 215
E + RR P+++
Sbjct: 117 EVRRRRFPILE 127
>gi|307708907|ref|ZP_07645367.1| acetoin utilization protein acuB [Streptococcus mitis SK564]
gi|307620243|gb|EFN99359.1| acetoin utilization protein acuB [Streptococcus mitis SK564]
Length = 218
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 68/131 (51%), Gaps = 20/131 (15%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT K + + P TTV A +++ E+ + PVI++D +LVGLV++ +
Sbjct: 3 VKDFMTRK--VVYISPDTTVSHAADLMREQGLHRLPVIEND-QLVGLVTEGTI------- 52
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+A S +T + E+ LL+KT V D+M V V +LEDA L+L
Sbjct: 53 --AQASPS-----KATSLSIYEMNYLLNKTK---VKDVMIRDVVTVSGYASLEDATYLML 102
Query: 205 ETKYRRLPVVD 215
+ K LPVVD
Sbjct: 103 KNKIGILPVVD 113
>gi|218887932|ref|YP_002437253.1| hypothetical protein DvMF_2848 [Desulfovibrio vulgaris str.
'Miyazaki F']
gi|218758886|gb|ACL09785.1| CBS domain containing membrane protein [Desulfovibrio vulgaris str.
'Miyazaki F']
Length = 223
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 60/121 (49%), Gaps = 17/121 (14%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P T++ +A +IL E RI PV+D + +L+G+VSD D+ A S +
Sbjct: 14 VTPDTSMMKASKILKENRIRRLPVVDAEGRLIGIVSDRDI---------KEASPSKATTL 64
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
D +E+ LLS+ V D+MT P VR +E A ++E + LPV+D
Sbjct: 65 D-----MHELYYLLSEIK---VKDIMTRDPFTVRADDTVETVALNMIEKRIGGLPVIDDA 116
Query: 218 G 218
G
Sbjct: 117 G 117
Score = 45.8 bits (107), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 51/99 (51%), Gaps = 3/99 (3%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL-ALDSI 143
V D MT + V+ TV+ ++EKRI G PVIDD KLVG++SD D+ L +I
Sbjct: 78 VKDIMT--RDPFTVRADDTVETVALNMIEKRIGGLPVIDDAGKLVGIISDSDVFKVLITI 135
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDL 182
+G E+++T T + L + N +++ L
Sbjct: 136 TGVRHGGVQFAFELENTPGTLKPIVDTLREHNARIISIL 174
>gi|149007633|ref|ZP_01831250.1| hypothetical protein CGSSp18BS74_04056 [Streptococcus pneumoniae
SP18-BS74]
gi|307127695|ref|YP_003879726.1| AcuB family protein [Streptococcus pneumoniae 670-6B]
gi|417676505|ref|ZP_12325918.1| CBS domain pair family protein [Streptococcus pneumoniae GA17545]
gi|418095856|ref|ZP_12732971.1| CBS domain pair family protein [Streptococcus pneumoniae GA16531]
gi|418112100|ref|ZP_12749103.1| CBS domain pair family protein [Streptococcus pneumoniae GA41538]
gi|418132595|ref|ZP_12769468.1| CBS domain pair family protein [Streptococcus pneumoniae GA11304]
gi|418154786|ref|ZP_12791517.1| CBS domain pair family protein [Streptococcus pneumoniae GA16242]
gi|418182349|ref|ZP_12818910.1| CBS domain pair family protein [Streptococcus pneumoniae GA43380]
gi|418225178|ref|ZP_12851807.1| CBS domain pair family protein [Streptococcus pneumoniae NP112]
gi|419466723|ref|ZP_14006606.1| CBS domain protein [Streptococcus pneumoniae GA05248]
gi|419512150|ref|ZP_14051784.1| CBS domain protein [Streptococcus pneumoniae GA05578]
gi|419516434|ref|ZP_14056052.1| CBS domain protein [Streptococcus pneumoniae GA02506]
gi|421282941|ref|ZP_15733730.1| CBS domain pair family protein [Streptococcus pneumoniae GA04216]
gi|147760788|gb|EDK67759.1| hypothetical protein CGSSp18BS74_04056 [Streptococcus pneumoniae
SP18-BS74]
gi|306484757|gb|ADM91626.1| AcuB family protein [Streptococcus pneumoniae 670-6B]
gi|332077170|gb|EGI87632.1| CBS domain pair family protein [Streptococcus pneumoniae GA17545]
gi|353770843|gb|EHD51354.1| CBS domain pair family protein [Streptococcus pneumoniae GA16531]
gi|353785749|gb|EHD66167.1| CBS domain pair family protein [Streptococcus pneumoniae GA41538]
gi|353806551|gb|EHD86824.1| CBS domain pair family protein [Streptococcus pneumoniae GA11304]
gi|353823078|gb|EHE03253.1| CBS domain pair family protein [Streptococcus pneumoniae GA16242]
gi|353850586|gb|EHE30590.1| CBS domain pair family protein [Streptococcus pneumoniae GA43380]
gi|353882486|gb|EHE62297.1| CBS domain pair family protein [Streptococcus pneumoniae NP112]
gi|379544846|gb|EHZ09990.1| CBS domain protein [Streptococcus pneumoniae GA05248]
gi|379636620|gb|EIA01178.1| CBS domain protein [Streptococcus pneumoniae GA05578]
gi|379640437|gb|EIA04976.1| CBS domain protein [Streptococcus pneumoniae GA02506]
gi|395882807|gb|EJG93851.1| CBS domain pair family protein [Streptococcus pneumoniae GA04216]
Length = 218
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 68/131 (51%), Gaps = 20/131 (15%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT K + + P TTV A +++ E+ + PVI++D +LVGLV++ +
Sbjct: 3 VKDFMTRK--VVYISPDTTVSHAADLMREQGLHRLPVIEND-QLVGLVTEGTI------- 52
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+A S +T + E+ LL+KT V D+M V V +LEDA L+L
Sbjct: 53 --AQASPS-----KATSLSIYEMNYLLNKTK---VKDVMIRDVVTVSGYASLEDATYLML 102
Query: 205 ETKYRRLPVVD 215
+ K LPVVD
Sbjct: 103 KNKIGILPVVD 113
>gi|409438980|ref|ZP_11266043.1| conserved hypothetical protein [Rhizobium mesoamericanum STM3625]
gi|408749640|emb|CCM77221.1| conserved hypothetical protein [Rhizobium mesoamericanum STM3625]
Length = 218
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 68/128 (53%), Gaps = 10/128 (7%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGS 146
D M T ++ + ++V +A++++V K I+G PVID+D L GL+++ DL+ G
Sbjct: 5 DIMNT--DITTISADSSVYQAIDLMVAKEISGLPVIDNDGNLCGLLTEGDLMRRIEFGGG 62
Query: 147 GRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLET 206
A N P+ ++ F++ ++ V D+M+ + + V T + A ++ +
Sbjct: 63 RSAGN---PD-KTSLVDFDD----YIRSRSWRVSDIMSTSVISVTLDTPVAAVAEVMFQN 114
Query: 207 KYRRLPVV 214
+ +R+PVV
Sbjct: 115 RIKRVPVV 122
>gi|418968741|ref|ZP_13520144.1| CBS domain protein [Streptococcus pseudopneumoniae ATCC BAA-960]
gi|383352531|gb|EID30223.1| CBS domain protein [Streptococcus pseudopneumoniae ATCC BAA-960]
Length = 218
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 67/131 (51%), Gaps = 20/131 (15%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT K + + P TTV A +++ E+ + PVI++D +LVGLV++
Sbjct: 3 VKDFMTRK--VVYISPDTTVSHAADLMREQGLHRLPVIEND-QLVGLVTE---------G 50
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+A S +T + E+ LL+KT V D+M V V +LEDA L+L
Sbjct: 51 TVAQASPS-----KATSLSIYEMNYLLNKTK---VKDVMIRDVVTVSGYASLEDATYLML 102
Query: 205 ETKYRRLPVVD 215
+ K LPVVD
Sbjct: 103 KNKIGILPVVD 113
>gi|312868294|ref|ZP_07728494.1| CBS domain protein [Streptococcus parasanguinis F0405]
gi|419800405|ref|ZP_14325686.1| CBS domain protein [Streptococcus parasanguinis F0449]
gi|311096039|gb|EFQ54283.1| CBS domain protein [Streptococcus parasanguinis F0405]
gi|385695118|gb|EIG25688.1| CBS domain protein [Streptococcus parasanguinis F0449]
Length = 218
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 70/133 (52%), Gaps = 20/133 (15%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT K + + P TT+ A +++ E+ + PVI++D KLVGLV++ +
Sbjct: 3 VKDFMTRK--VVYISPDTTIAHAADLMREQGLHRLPVIEND-KLVGLVTEGTI------- 52
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
A+ S P ++ F E+ LL+KT V D+M + V + +LEDA L+
Sbjct: 53 ----AEAS--PSKATSLSIF-EMNYLLNKTK---VKDVMLRDVITVSKFASLEDATYLMY 102
Query: 205 ETKYRRLPVVDAD 217
+ K LPVVD D
Sbjct: 103 KNKVGILPVVDND 115
>gi|296453971|ref|YP_003661114.1| EmrB/QacA subfamily drug resistance transporter [Bifidobacterium
longum subsp. longum JDM301]
gi|296183402|gb|ADH00284.1| drug resistance transporter, EmrB/QacA subfamily [Bifidobacterium
longum subsp. longum JDM301]
Length = 683
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 56/110 (50%), Gaps = 6/110 (5%)
Query: 111 LVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNE--VQ 168
+ ++ PV++ D +LVG VSD D+L S + ++ ST F++ V
Sbjct: 553 FIRLNVSSLPVVNGDGRLVGFVSDGDVLK----SIATYESRTVSTGTGSTMVVFDDETVA 608
Query: 169 KLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADG 218
+ +GK V D+ T V ++ + AR+L + ++++LPVVD DG
Sbjct: 609 SKVQALSGKKVMDIATRKVVAATPDQHVGEVARILAKKQFKKLPVVDGDG 658
>gi|290955600|ref|YP_003486782.1| hypothetical protein SCAB_10371 [Streptomyces scabiei 87.22]
gi|260645126|emb|CBG68212.1| conserved hypothetical protein [Streptomyces scabiei 87.22]
Length = 209
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 63/137 (45%), Gaps = 17/137 (12%)
Query: 83 YTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS 142
YTV D MT + V E +++ + +++ PV++ + ++VG+VS+ DLL
Sbjct: 7 YTVSDVMT--HTVVAVGRDAPFKEIVQLFDQWKVSALPVLEGEGRVVGVVSEADLL---- 60
Query: 143 ISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARL 202
F + D F + +L K G+LM V V +L +AAR+
Sbjct: 61 -------HKEEFRDADERQGDFAD--RL--KAGAVTAGELMNAPAVSVHPDASLAEAARI 109
Query: 203 LLETKYRRLPVVDADGW 219
+ K +RLPVVD G
Sbjct: 110 MARRKVKRLPVVDRVGM 126
>gi|410479970|ref|YP_006767607.1| CBS domain-like protein [Leptospirillum ferriphilum ML-04]
gi|406775222|gb|AFS54647.1| CBS domain-like protein [Leptospirillum ferriphilum ML-04]
Length = 157
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 62/126 (49%), Gaps = 14/126 (11%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V+P T V++ +L+ I G PV+D + +L+G+V+ DL+ AD + P
Sbjct: 14 VQPETPVEDIASLLLSHHINGVPVVDGENRLLGVVTAEDLI-------HRGADERLEPR- 65
Query: 158 DSTWKTFNEVQKL------LSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRL 211
+S WK V L K G+ ++MT V +L AARL+++ + L
Sbjct: 66 ESVWKENFWVSFLGPQGSHRGKAEGRTAAEVMTKEVHSVEPDMHLSVAARLMIDHRLTSL 125
Query: 212 PVVDAD 217
PV++A+
Sbjct: 126 PVLEAE 131
>gi|347733998|ref|ZP_08867051.1| CBS domain pair family protein [Desulfovibrio sp. A2]
gi|347517235|gb|EGY24427.1| CBS domain pair family protein [Desulfovibrio sp. A2]
Length = 223
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 60/121 (49%), Gaps = 17/121 (14%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P T++ +A +IL E RI PV+D + +L+G+VSD D+ A S +
Sbjct: 14 VTPDTSMMKASKILKENRIRRLPVVDAEGRLIGIVSDRDI---------KEASPSKATTL 64
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
D +E+ LLS+ V D+MT P VR +E A ++E + LPV+D
Sbjct: 65 D-----MHELYYLLSEIK---VKDIMTRDPFTVRADDTVETVALNMIEKRIGGLPVIDDG 116
Query: 218 G 218
G
Sbjct: 117 G 117
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 51/99 (51%), Gaps = 3/99 (3%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL-ALDSI 143
V D MT + V+ TV+ ++EKRI G PVIDD KLVG++SD D+ L +I
Sbjct: 78 VKDIMT--RDPFTVRADDTVETVALNMIEKRIGGLPVIDDGGKLVGIISDSDVFKVLITI 135
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDL 182
+G E+++T T + L + N +++ L
Sbjct: 136 TGVRHGGVQFAFELENTPGTLKPIVDTLREHNARIISIL 174
>gi|298230935|ref|ZP_06964616.1| AcuB family protein [Streptococcus pneumoniae str. Canada MDR_19F]
Length = 196
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 70/138 (50%), Gaps = 24/138 (17%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT K + + P TTV A +++ E+ + PVI++D +LVGLV++ +
Sbjct: 3 VKDFMTRK--VVYISPDTTVSHAADLMREQGLHRLPVIEND-QLVGLVTEGTI------- 52
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+A S +T + E+ LL+KT V D+M V V +LEDA L+L
Sbjct: 53 --AQASPS-----KATSLSIYEMNYLLNKTK---VKDVMIRDVVTVSGYASLEDATYLML 102
Query: 205 ETKYRRLPVVDADGWNYH 222
+ K LPVVD NY
Sbjct: 103 KNKIGILPVVD----NYQ 116
>gi|392428332|ref|YP_006469343.1| hypothetical protein SCIM_0441 [Streptococcus intermedius JTH08]
gi|419777561|ref|ZP_14303472.1| CBS domain protein [Streptococcus intermedius SK54]
gi|383844797|gb|EID82208.1| CBS domain protein [Streptococcus intermedius SK54]
gi|391757478|dbj|BAM23095.1| conserved hypothetical protein [Streptococcus intermedius JTH08]
Length = 218
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 69/131 (52%), Gaps = 20/131 (15%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT K + + P TTV A +I+ + + PVI++D +LVGLV++ +I+
Sbjct: 3 VKDFMTRK--VVYISPDTTVAHAADIMRAQELHRLPVIEND-QLVGLVTE------GTIA 53
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+ + +T + E+ LL+KT K D+M V V + +LEDA L+L
Sbjct: 54 EASPSK--------ATSLSIYEMNYLLNKTKIK---DIMIRDVVTVSQFASLEDATYLML 102
Query: 205 ETKYRRLPVVD 215
+ K LPVVD
Sbjct: 103 KNKIGILPVVD 113
>gi|452949642|gb|EME55109.1| hypothetical protein H074_26412 [Amycolatopsis decaplanina DSM
44594]
Length = 201
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 17/119 (14%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P +T A E+L EK T PV+D+D +L+G+V++ DL+ + FP+
Sbjct: 14 VTPGSTAKHAAELLAEKGFTALPVVDEDDRLIGIVTEADLI------------RNRFPDD 61
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDA 216
+ + + G VG +MT + N D R LL+ R +P+VD
Sbjct: 62 VRSGRDPEARPR-----PGLTVGQVMTMPATGMSTGANAADVGRALLDGHIRAMPIVDG 115
>gi|448695944|ref|ZP_21697598.1| peptidase M50 [Halobiforma lacisalsi AJ5]
gi|445784055|gb|EMA34875.1| peptidase M50 [Halobiforma lacisalsi AJ5]
Length = 399
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 36/54 (66%), Gaps = 4/54 (7%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVID-DDW---KLVGLVS 133
TV D MT E+LH V P TT+ E ++ + +R TG+PV++ D W +L+GLV+
Sbjct: 251 TVADIMTPAEDLHTVSPDTTISELVQRMFAERHTGYPVVERDGWGDDRLIGLVT 304
>gi|258404842|ref|YP_003197584.1| hypothetical protein Dret_0714 [Desulfohalobium retbaense DSM 5692]
gi|257797069|gb|ACV68006.1| CBS domain containing protein [Desulfohalobium retbaense DSM 5692]
Length = 227
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 65/134 (48%), Gaps = 19/134 (14%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V ++MTTK +H V T+ EA + L + I PV+D +L+G+V+D D+
Sbjct: 3 VENWMTTK--VHTVAADATLMEASKTLKDYAIRRLPVVDSHGRLLGIVTDRDI------- 53
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
A S +D +E+ LLS + + D+MTP+PV VR + AA L+
Sbjct: 54 --KEASPSRATTLD-----IHELYYLLSAIS---LQDIMTPSPVTVRARDTVGRAAILMR 103
Query: 205 ETKYRRLPVVDADG 218
LPVVD D
Sbjct: 104 RHTIEGLPVVDDDN 117
>gi|423070804|ref|ZP_17059580.1| hypothetical protein HMPREF9177_00897 [Streptococcus intermedius
F0413]
gi|355364898|gb|EHG12625.1| hypothetical protein HMPREF9177_00897 [Streptococcus intermedius
F0413]
Length = 218
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 69/131 (52%), Gaps = 20/131 (15%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT K + + P TTV A +I+ + + PVI++D +LVGLV++ +I+
Sbjct: 3 VKDFMTRK--VVYISPDTTVAHAADIMRAQELHRLPVIEND-QLVGLVTE------GTIA 53
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+ + +T + E+ LL+KT K D+M V V + +LEDA L+L
Sbjct: 54 EASPSK--------ATSLSIYEMNYLLNKTKIK---DVMIRDVVTVSQFASLEDATYLML 102
Query: 205 ETKYRRLPVVD 215
+ K LPVVD
Sbjct: 103 KNKIGILPVVD 113
>gi|326792093|ref|YP_004309914.1| hypothetical protein Clole_3019 [Clostridium lentocellum DSM 5427]
gi|326542857|gb|ADZ84716.1| CBS domain containing membrane protein [Clostridium lentocellum DSM
5427]
Length = 150
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 65/126 (51%), Gaps = 12/126 (9%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V+ +++ + IL++ +I+G PV+D++ +LVG+VS+ DL+ + G +S +
Sbjct: 14 VRNEELLEDIINILMKHQISGVPVVDENNQLVGVVSEKDLMTKE----KGLNISSYIAFM 69
Query: 158 DSTW-----KTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLP 212
S K E + +L T K V + TPA V E T +E+ L++ R+P
Sbjct: 70 TSILGIDGKKQLGESRAILQTTTAKEV--MSTPAFAVHEEAT-IEEVVSLMMNRHINRIP 126
Query: 213 VVDADG 218
V++ D
Sbjct: 127 VINEDN 132
Score = 37.4 bits (85), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 27/43 (62%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLAL 140
V T++E + +++ + I PVI++D KLVG++ DLL L
Sbjct: 104 VHEEATIEEVVSLMMNRHINRIPVINEDNKLVGIIGRTDLLPL 146
>gi|406896138|gb|EKD40516.1| AcuB2 [uncultured bacterium]
Length = 231
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 57/120 (47%), Gaps = 16/120 (13%)
Query: 100 PTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDS 159
P T+ EA I+ EK I PVID KL+G+V+D D+ + +AD +
Sbjct: 16 PDITIFEAKTIMTEKSIRHLPVIDPAGKLIGIVTDRDVRDAMPSTLLKKADYEL------ 69
Query: 160 TWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGW 219
L+K V D+MT P+ + ++D+ ++++ K LPV+D +G+
Sbjct: 70 ----------TLAKIMNFPVKDIMTKNPMTIYAYYTIQDSLLVMMKKKVGALPVIDEEGY 119
>gi|417848160|ref|ZP_12494112.1| CBS domain protein [Streptococcus mitis SK1073]
gi|339455185|gb|EGP67793.1| CBS domain protein [Streptococcus mitis SK1073]
Length = 218
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 68/131 (51%), Gaps = 20/131 (15%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT K + + P TTV A +++ E+ + PVI++D +LVGLV++ +
Sbjct: 3 VKDFMTRK--VVYISPDTTVSHAADLMREQGLHRLPVIEND-QLVGLVTEGTI------- 52
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+A S +T + E+ LL+KT V D+M V V +LEDA L+L
Sbjct: 53 --AQASPS-----KATSLSIYEMNYLLNKTK---VKDVMIRDVVTVSGYASLEDATYLML 102
Query: 205 ETKYRRLPVVD 215
+ K LPVVD
Sbjct: 103 KNKIGILPVVD 113
>gi|229817773|ref|ZP_04448055.1| hypothetical protein BIFANG_03045 [Bifidobacterium angulatum DSM
20098 = JCM 7096]
gi|229785562|gb|EEP21676.1| hypothetical protein BIFANG_03045 [Bifidobacterium angulatum DSM
20098 = JCM 7096]
Length = 683
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 58/111 (52%), Gaps = 8/111 (7%)
Query: 111 LVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPE-VDSTWKTFNE--V 167
+ ++ PV++ D +LVG VSD D+L SI+ ++ P ST F++ V
Sbjct: 553 FIRLNVSSLPVVNGDGRLVGFVSDGDVL--KSIA---TYESRTVPTGTGSTMVVFDDETV 607
Query: 168 QKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADG 218
+ +GK V D+ T V ++ + AR+L + ++++LPVVD DG
Sbjct: 608 ASKVQALSGKKVMDIATRKVVAATPDQHVGEVARILAKKQFKKLPVVDGDG 658
>gi|323701708|ref|ZP_08113379.1| putative signal transduction protein with CBS domains
[Desulfotomaculum nigrificans DSM 574]
gi|333923567|ref|YP_004497147.1| putative signal transduction protein with CBS domains
[Desulfotomaculum carboxydivorans CO-1-SRB]
gi|323533244|gb|EGB23112.1| putative signal transduction protein with CBS domains
[Desulfotomaculum nigrificans DSM 574]
gi|333749128|gb|AEF94235.1| putative signal transduction protein with CBS domains
[Desulfotomaculum carboxydivorans CO-1-SRB]
Length = 148
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 62/124 (50%), Gaps = 20/124 (16%)
Query: 102 TTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS---------ISGSGRADNS 152
TT+ E +IL + +I+G PV+D+ KLVG+V++ DLL ++ I G
Sbjct: 18 TTIKEIAQILTDNKISGVPVVDEAGKLVGIVTEGDLLHKEANPRIPKFVGILGG----IL 73
Query: 153 MFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLP 212
F VD F ++ L + ++MT + V + T++ A L+LE +R+P
Sbjct: 74 YFGGVDQYKDDFKKLAALKA-------SEIMTSKVITVSKDTDVGTIATLMLENNIKRIP 126
Query: 213 VVDA 216
V ++
Sbjct: 127 VTES 130
>gi|288932598|ref|YP_003436658.1| CBS domain containing protein [Ferroglobus placidus DSM 10642]
gi|288894846|gb|ADC66383.1| CBS domain containing protein [Ferroglobus placidus DSM 10642]
Length = 278
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 59/129 (45%), Gaps = 36/129 (27%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGS 146
D MT E++ ++ T D+ +E+ + I+ PV+ D KLVG+++ D+L
Sbjct: 5 DVMT--EDVIFIELPNTRDKVIELFKKHGISAVPVVKDG-KLVGIITRKDIL-------- 53
Query: 147 GRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLET 206
K V LMTP P V T+L++ AR+LL+T
Sbjct: 54 -------------------------RKVEEDQVAFLMTPNPTTVTPDTDLKEVARILLDT 88
Query: 207 KYRRLPVVD 215
+RRLPVV+
Sbjct: 89 HFRRLPVVE 97
>gi|150008997|ref|YP_001303740.1| inosine-5'-monophosphate dehydrogenase [Parabacteroides distasonis
ATCC 8503]
gi|255014828|ref|ZP_05286954.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 2_1_7]
gi|256841002|ref|ZP_05546509.1| inosine-5'-monophosphate dehydrogenase [Parabacteroides sp. D13]
gi|262383887|ref|ZP_06077023.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 2_1_33B]
gi|298375771|ref|ZP_06985727.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 3_1_19]
gi|301312047|ref|ZP_07217969.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 20_3]
gi|410102763|ref|ZP_11297688.1| inosine-5'-monophosphate dehydrogenase [Parabacteroides sp. D25]
gi|423330258|ref|ZP_17308042.1| inosine-5'-monophosphate dehydrogenase [Parabacteroides distasonis
CL03T12C09]
gi|423339398|ref|ZP_17317139.1| inosine-5'-monophosphate dehydrogenase [Parabacteroides distasonis
CL09T03C24]
gi|149937421|gb|ABR44118.1| inosine-5'-monophosphate dehydrogenase [Parabacteroides distasonis
ATCC 8503]
gi|256736845|gb|EEU50172.1| inosine-5'-monophosphate dehydrogenase [Parabacteroides sp. D13]
gi|262294785|gb|EEY82717.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 2_1_33B]
gi|298266808|gb|EFI08465.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 3_1_19]
gi|300830149|gb|EFK60797.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 20_3]
gi|409230779|gb|EKN23640.1| inosine-5'-monophosphate dehydrogenase [Parabacteroides distasonis
CL09T03C24]
gi|409231874|gb|EKN24722.1| inosine-5'-monophosphate dehydrogenase [Parabacteroides distasonis
CL03T12C09]
gi|409237890|gb|EKN30685.1| inosine-5'-monophosphate dehydrogenase [Parabacteroides sp. D25]
Length = 491
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 57/113 (50%), Gaps = 31/113 (27%)
Query: 104 VDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKT 163
V +AL ++ E +I G PV+D+ LVG+V++ DL R + M +D
Sbjct: 110 VADALAMMAEYKIGGIPVVDEGGYLVGIVTNRDL----------RFEKDMNRSID----- 154
Query: 164 FNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDA 216
++++K N VV ++T++E AA++L E K +LPVVD+
Sbjct: 155 -----EVMTKEN-----------LVVTGQSTDMEAAAQILQEHKIEKLPVVDS 191
Score = 40.0 bits (92), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 31/51 (60%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL 137
D + TKE L V +T ++ A +IL E +I PV+D KL+GL++ D+
Sbjct: 154 DEVMTKENLVVTGQSTDMEAAAQILQEHKIEKLPVVDSHNKLIGLITYKDI 204
>gi|383620273|ref|ZP_09946679.1| peptidase M50 [Halobiforma lacisalsi AJ5]
Length = 398
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 36/54 (66%), Gaps = 4/54 (7%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVID-DDW---KLVGLVS 133
TV D MT E+LH V P TT+ E ++ + +R TG+PV++ D W +L+GLV+
Sbjct: 250 TVADIMTPAEDLHTVSPDTTISELVQRMFAERHTGYPVVERDGWGDDRLIGLVT 303
>gi|222625756|gb|EEE59888.1| hypothetical protein OsJ_12490 [Oryza sativa Japonica Group]
Length = 867
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 79 SSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 138
SS VGD MT + +L VKP T V +A++++ EKRI PVID +VG+VS D++
Sbjct: 787 SSKSTKVGDIMTEENQLITVKPDTRVLQAMQLMTEKRIRHIPVIDGT-GMVGMVSIGDIV 845
>gi|163787050|ref|ZP_02181497.1| CBS domain protein, putative [Flavobacteriales bacterium ALC-1]
gi|159876938|gb|EDP70995.1| CBS domain protein, putative [Flavobacteriales bacterium ALC-1]
Length = 161
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 69/137 (50%), Gaps = 25/137 (18%)
Query: 79 SSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 138
SS V D+MTT +L KP +V E +E L++ +I+G PV+++ +LVG++S+ D L
Sbjct: 17 SSTSLKVKDYMTT--QLITFKPNQSVQEVVESLIKNKISGGPVVNEKNELVGIISEGDCL 74
Query: 139 ALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLED 198
S S R N M + D+ K +M ++ T + ++ D
Sbjct: 75 KQLSES---RYYN-MPLDHDNVEK--------------RMATNVET-----IDGNMDVFD 111
Query: 199 AARLLLETKYRRLPVVD 215
AA L++K RR P+V+
Sbjct: 112 AANKFLQSKRRRFPIVE 128
>gi|399040053|ref|ZP_10735507.1| CBS-domain-containing membrane protein [Rhizobium sp. CF122]
gi|398061938|gb|EJL53724.1| CBS-domain-containing membrane protein [Rhizobium sp. CF122]
Length = 223
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 70/134 (52%), Gaps = 14/134 (10%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGS 146
+ MTT + + P V A+ ++++ I+G PV+DD+ + G++++ DLL I +
Sbjct: 5 EIMTTN--VVSISPAVGVRHAVAVMIQNNISGLPVVDDESLVCGMLTEGDLLLRREIRLA 62
Query: 147 GRADNS--MFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
R+ S E+D +++ + ++G V D+M+ +V R + + D A L
Sbjct: 63 PRSVRSAEFISEID--------LERYIC-SHGWCVADVMSQDVIVARPDSEVSDIAESLQ 113
Query: 205 ETKYRRLPVVDADG 218
+ +RLP+V+ DG
Sbjct: 114 AHRIKRLPIVE-DG 126
>gi|336119353|ref|YP_004574130.1| hypothetical protein MLP_37130 [Microlunatus phosphovorus NM-1]
gi|334687142|dbj|BAK36727.1| hypothetical protein MLP_37130 [Microlunatus phosphovorus NM-1]
Length = 224
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 58/130 (44%), Gaps = 20/130 (15%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGS 146
D MTT V+P+T + E IL ++ PVIDDD +LVGLV++ DL+
Sbjct: 5 DIMTTPAV--CVRPSTPIAEVAAILAQRGFCAVPVIDDDDQLVGLVTETDLI-------- 54
Query: 147 GRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLET 206
R + P+ ++ + + M +MT VR L A+ ++
Sbjct: 55 -RERFGLHPQPPTSGR---------DRPPKTMAAQVMTSPVEFVRPEATLSALAKCMISG 104
Query: 207 KYRRLPVVDA 216
+ R +PVV+
Sbjct: 105 RRRSMPVVEG 114
>gi|86158851|ref|YP_465636.1| signal transduction protein [Anaeromyxobacter dehalogenans 2CP-C]
gi|85775362|gb|ABC82199.1| putative signal transduction protein with CBS domains
[Anaeromyxobacter dehalogenans 2CP-C]
Length = 149
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 64/135 (47%), Gaps = 20/135 (14%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TVGD+MT ++ ++V EA+ +L EK I PV+ +LVGLV++ L
Sbjct: 7 TVGDWMTKNPI--TIEDESSVIEAIHLLKEKNIRRLPVMRQG-RLVGLVTEKMLFG---- 59
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
P +T + E+ LLSKT V M PAP V T L +AARLL
Sbjct: 60 ---------YMPAKATTLDQW-ELHYLLSKTP---VRAAMNPAPHTVHPDTPLAEAARLL 106
Query: 204 LETKYRRLPVVDADG 218
+ K + VV A G
Sbjct: 107 HDRKLNGVIVVSAQG 121
>gi|333916333|ref|YP_004490065.1| CBS domain-containing membrane protein [Delftia sp. Cs1-4]
gi|333746533|gb|AEF91710.1| CBS domain containing membrane protein [Delftia sp. Cs1-4]
Length = 232
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 69/161 (42%), Gaps = 21/161 (13%)
Query: 58 ALRRSSAVFASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRIT 117
A R AV A + + P + TV D M+ E V P V++A +L E +
Sbjct: 68 APRLRGAVDAYLSTEKGPSQPRQPLQTVADVMS--HEAVTVSPEAGVNDAWRVLAEHGVA 125
Query: 118 GFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGK 177
PV+D ++VGL+ D+ LD + G ++ + + NEV
Sbjct: 126 QAPVLDAGGRVVGLLLRADMAPLDLLPEPGAIKDA----IALARRPVNEV---------- 171
Query: 178 MVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADG 218
+++P P V TT+L A +LLET LPV D G
Sbjct: 172 ----MISPIPTVA-TTTDLRRVAGVLLETGLPGLPVTDEQG 207
>gi|429196463|ref|ZP_19188423.1| hypothetical protein STRIP9103_08187 [Streptomyces ipomoeae 91-03]
gi|428667796|gb|EKX66859.1| hypothetical protein STRIP9103_08187 [Streptomyces ipomoeae 91-03]
Length = 119
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 54/117 (46%), Gaps = 8/117 (6%)
Query: 121 VIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNE-VQKLLSKTNGKMV 179
++D+D K++G++S DL+A + + F T+ + ++ +K N +
Sbjct: 1 MVDEDDKVIGVISQTDLIARQAATPGPYEPRRRF-----TFSSLTRGARRQAAKANARTA 55
Query: 180 GDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGWNYHKRKCSKGGSSNKTC 236
G LMT PV + +AAR + + + RLPV+D + R G + +C
Sbjct: 56 GRLMTEPPVTAHADDTIVEAARTMAQHQVERLPVLDEEDQPLRHRHPP--GPAPDSC 110
>gi|115455195|ref|NP_001051198.1| Os03g0737000 [Oryza sativa Japonica Group]
gi|29788876|gb|AAP03422.1| unknown protein [Oryza sativa Japonica Group]
gi|32352166|dbj|BAC78576.1| hypothetical protein [Oryza sativa Japonica Group]
gi|37999993|gb|AAR07080.1| unknown protein [Oryza sativa Japonica Group]
gi|108710961|gb|ABF98756.1| CBS domain containing protein, expressed [Oryza sativa Japonica
Group]
gi|108710962|gb|ABF98757.1| CBS domain containing protein, expressed [Oryza sativa Japonica
Group]
gi|108710963|gb|ABF98758.1| CBS domain containing protein, expressed [Oryza sativa Japonica
Group]
gi|113549669|dbj|BAF13112.1| Os03g0737000 [Oryza sativa Japonica Group]
gi|215692663|dbj|BAG88083.1| unnamed protein product [Oryza sativa Japonica Group]
gi|301087459|gb|ADK60921.1| CBSX4 [Oryza sativa Indica Group]
Length = 205
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 138
VGD MT + +L VKP T V +A++++ EKRI PVID +VG+VS D++
Sbjct: 131 VGDIMTEENQLITVKPDTRVLQAMQLMTEKRIRHIPVIDGT-GMVGMVSIGDIV 183
>gi|406985270|gb|EKE06084.1| IMP dehydrogenase/GMP reductase, partial [uncultured bacterium]
Length = 254
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 59/124 (47%), Gaps = 34/124 (27%)
Query: 96 HVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFP 155
+ + P T+ EA E ++EK I+G V + D KL+G++S D+L
Sbjct: 100 YTINPNRTLSEAKEEIIEKGISGLLVSNGDGKLLGVLSKRDIL----------------- 142
Query: 156 EVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAP--VVVRETTNLEDAARLLLETKYRRLPV 213
F E + LL V D+MTP +V +TNL +A RLL + + +LP+
Sbjct: 143 --------FAEGEHLL-------VHDMMTPRERLIVGDISTNLGEAKRLLAQHRIEKLPL 187
Query: 214 VDAD 217
VD +
Sbjct: 188 VDEN 191
Score = 40.8 bits (94), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 33/53 (62%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL 137
V D MT +E L V +T + EA +L + RI P++D++ K+VGL++ D+
Sbjct: 151 VHDMMTPRERLIVGDISTNLGEAKRLLAQHRIEKLPLVDENNKIVGLITSCDI 203
>gi|383790514|ref|YP_005475088.1| putative signal transduction protein [Spirochaeta africana DSM
8902]
gi|383107048|gb|AFG37381.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Spirochaeta africana DSM 8902]
Length = 212
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 62/122 (50%), Gaps = 18/122 (14%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V+ TT+V +A +L + R PV+++ KL+G+VS+ DLL G
Sbjct: 14 VEKTTSVTDAQALLRQGRFHRLPVLNNRQKLIGIVSEKDLLYAAPSPG------------ 61
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
T E+ +LL+K N VGD+MT + V T +EDAA ++++ LPV+ D
Sbjct: 62 --TALDVYEMSELLNKLN---VGDVMTEDVITVDADTLVEDAAGIMVDNNIGGLPVMQ-D 115
Query: 218 GW 219
G
Sbjct: 116 GQ 117
>gi|355571671|ref|ZP_09042899.1| putative signal transduction protein with CBS domains [Methanolinea
tarda NOBI-1]
gi|354825304|gb|EHF09534.1| putative signal transduction protein with CBS domains [Methanolinea
tarda NOBI-1]
Length = 157
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 65/120 (54%), Gaps = 12/120 (10%)
Query: 103 TVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGR-ADNSMFPE----V 157
T+ EA +L E+ I G PV+D D +LVG++++ D+L L +GR +D+ P +
Sbjct: 19 TIREAAALLRERNIGGLPVMDGD-RLVGMITESDILRLLE---TGRISDDLWLPSPLEVI 74
Query: 158 DSTWKTF---NEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVV 214
+ + F + + L+ K V +M+ V + E ++E+AA L+L K RLPV+
Sbjct: 75 EVPIREFINWEKTRHALTAIGEKEVRTVMSHPVVTIGEDADIEEAASLMLSKKIARLPVM 134
>gi|229496331|ref|ZP_04390051.1| putative chloride channel [Porphyromonas endodontalis ATCC 35406]
gi|229316909|gb|EEN82822.1| putative chloride channel [Porphyromonas endodontalis ATCC 35406]
Length = 586
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 58/128 (45%), Gaps = 29/128 (22%)
Query: 92 KEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADN 151
+ E + P T+ + + I+ E R FPV+D D +LVG+V LD+I N
Sbjct: 461 ETEFSTIAPEMTLGDVVRIIGESRRNVFPVVDGDKRLVGIV------LLDNIR------N 508
Query: 152 SMF-PEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRR 210
MF PE+ ++ V M P + T ++E+A R +TK
Sbjct: 509 IMFRPELYDRFQ----------------VETFMVSPPAKILSTMSMEEAMRTFDDTKAWN 552
Query: 211 LPVVDADG 218
LPVVDA+G
Sbjct: 553 LPVVDAEG 560
>gi|430762620|ref|YP_007218477.1| acetoin utilization protein AcuB [Thioalkalivibrio nitratireducens
DSM 14787]
gi|430012244|gb|AGA34996.1| acetoin utilization protein AcuB [Thioalkalivibrio nitratireducens
DSM 14787]
Length = 143
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 59/129 (45%), Gaps = 31/129 (24%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
+ D MT ++ L VV P TVD+ I+ E RI PV+D L+GLV+ D+L ++
Sbjct: 4 ISDIMTPRQNLVVVHPDATVDDVRRIMAEHRIRHVPVLDASGDLLGLVAQTDVL----LA 59
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
GS + +EV MV DL T V E +N+ AA L+L
Sbjct: 60 GS------------DGPRHVHEV----------MVHDLDT-----VDERSNVRHAALLML 92
Query: 205 ETKYRRLPV 213
K LPV
Sbjct: 93 RRKRSCLPV 101
>gi|381210106|ref|ZP_09917177.1| CBS domain containing membrane protein [Lentibacillus sp. Grbi]
Length = 155
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 68/134 (50%), Gaps = 10/134 (7%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
+ DFM T ++ V+ + + L+ LVE +I G PV+D++ +L+G++SD D++ +
Sbjct: 3 IQDFMIT--DVISVQEDIKIKDLLKTLVEHKIGGVPVVDENARLIGMISDGDVIRY--LQ 58
Query: 145 GSGRADNSMFPEVDSTWKT--FNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARL 202
GR F V T K N+++ + + ++V V +E+A L
Sbjct: 59 PDGRTIYDAFSMVFITEKEGLRNKIETSIEHHSSEIV----KKNVYAVHPDDEIEEALSL 114
Query: 203 LLETKYRRLPVVDA 216
L ++++PVVDA
Sbjct: 115 LSRYHFKKIPVVDA 128
>gi|108710960|gb|ABF98755.1| CBS domain containing protein, expressed [Oryza sativa Japonica
Group]
Length = 230
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 138
VGD MT + +L VKP T V +A++++ EKRI PVID +VG+VS D++
Sbjct: 156 VGDIMTEENQLITVKPDTRVLQAMQLMTEKRIRHIPVIDGT-GMVGMVSIGDIV 208
>gi|448417455|ref|ZP_21579391.1| zn-dependent protease [Halosarcina pallida JCM 14848]
gi|445677943|gb|ELZ30439.1| zn-dependent protease [Halosarcina pallida JCM 14848]
Length = 392
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 61/135 (45%), Gaps = 30/135 (22%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TV D MT + L VV T+V E L+ + +R TG+PV+ + LVG+V+ D
Sbjct: 249 TVRDIMTERNRLDVVDVRTSVAELLDRMFRERHTGYPVMKNG-HLVGMVTLNDA------ 301
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
++ NEV++ + +VGD+M+ V N DA ++
Sbjct: 302 ------------------RSVNEVER-----DAYLVGDVMSGELTTVLPDANAMDAITVM 338
Query: 204 LETKYRRLPVVDADG 218
E RLPVVD G
Sbjct: 339 QENGVGRLPVVDESG 353
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 7/84 (8%)
Query: 69 GTLTANSAAPSSGV----YTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDD 124
G +T N A + V Y VGD M+ EL V P +A+ ++ E + PV+D+
Sbjct: 294 GMVTLNDARSVNEVERDAYLVGDVMSG--ELTTVLPDANAMDAITVMQENGVGRLPVVDE 351
Query: 125 DWKLVGLVSDYDLL-ALDSISGSG 147
+LVGL+S DL+ AL+ I G
Sbjct: 352 SGELVGLISRSDLVTALNIIQSRG 375
>gi|119026509|ref|YP_910354.1| efflux transporter protein [Bifidobacterium adolescentis ATCC
15703]
gi|118766093|dbj|BAF40272.1| possible efflux transporter protein [Bifidobacterium adolescentis
ATCC 15703]
Length = 692
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 56/110 (50%), Gaps = 6/110 (5%)
Query: 111 LVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNE--VQ 168
+ ++ PV++ D +LVG VSD D++ S + ++ ST F++ V
Sbjct: 562 FIRLNVSSLPVVNGDGRLVGFVSDGDVMK----SIATYESRTVSTGTGSTMVVFDDETVA 617
Query: 169 KLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADG 218
+ +GK V D+ T V ++ + AR+L + ++++LPVVD DG
Sbjct: 618 SKVQALSGKKVMDIATHKVVAATPDQHVGEVARILAKKQFKKLPVVDGDG 667
>gi|406662595|ref|ZP_11070687.1| putative manganese-dependent inorganic pyrophosphatase [Cecembia
lonarensis LW9]
gi|405553460|gb|EKB48685.1| putative manganese-dependent inorganic pyrophosphatase [Cecembia
lonarensis LW9]
Length = 152
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 59/130 (45%), Gaps = 25/130 (19%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D M+T L ++D LE+L +++I+G PV+D + +L+G++S+ D L I
Sbjct: 22 VKDHMST--SLVTFHAEDSIDHVLEVLTKRKISGAPVVDKEGRLIGIISEVD--CLKEII 77
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
++ FP V D MT + + +L DAA+ L
Sbjct: 78 KGKYSNTPKFPGT---------------------VADHMTEDVITLSPDLSLFDAAQKFL 116
Query: 205 ETKYRRLPVV 214
+ K RR PV+
Sbjct: 117 DLKIRRFPVL 126
>gi|325286429|ref|YP_004262219.1| signal transduction protein with CBS domains [Cellulophaga lytica
DSM 7489]
gi|324321883|gb|ADY29348.1| putative signal transduction protein with CBS domains [Cellulophaga
lytica DSM 7489]
Length = 154
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 65/133 (48%), Gaps = 25/133 (18%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D+MT K L KP ++ E +E+ + I+G PV+D++ LVG++S+ D + IS
Sbjct: 23 VEDYMTKK--LITFKPDQSILEVMELFTKHNISGGPVLDNNGFLVGIISEAD--CMKQIS 78
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
S + FN Q +L+K+ V + MT + ++ DAA + +
Sbjct: 79 ES---------------RYFN--QPILNKS----VENFMTRDVEFISPDISIFDAAGIFV 117
Query: 205 ETKYRRLPVVDAD 217
RRLPV+ D
Sbjct: 118 RHNRRRLPVLKND 130
>gi|343524583|ref|ZP_08761541.1| CBS domain protein [Streptococcus constellatus subsp. pharyngis
SK1060 = CCUG 46377]
gi|343398232|gb|EGV10765.1| CBS domain protein [Streptococcus constellatus subsp. pharyngis
SK1060 = CCUG 46377]
Length = 218
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 69/131 (52%), Gaps = 20/131 (15%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT K + + P TTV A +I+ + + PVI++D +LVGLV++ +I+
Sbjct: 3 VKDFMTRK--VVYISPDTTVAHAADIMRAQELHRLPVIEND-QLVGLVTE------GTIA 53
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+ + +T + E+ LL+KT K D+M V V + +LEDA L+L
Sbjct: 54 EASPSK--------ATSLSIYEMNYLLNKTKIK---DVMIRDVVTVSQFASLEDATYLML 102
Query: 205 ETKYRRLPVVD 215
+ K LPVVD
Sbjct: 103 KNKIGILPVVD 113
>gi|256829700|ref|YP_003158428.1| hypothetical protein Dbac_1922 [Desulfomicrobium baculatum DSM
4028]
gi|256578876|gb|ACU90012.1| CBS domain containing membrane protein [Desulfomicrobium baculatum
DSM 4028]
Length = 196
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 63/135 (46%), Gaps = 9/135 (6%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
T D MT +H ++ + EA ++ I+G PV+D + ++ G+VS+ D L +
Sbjct: 53 TAEDIMTAP--VHCLQKGMSASEAAALMAGLGISGAPVLDVEGRICGVVSEKDYLRKMGL 110
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
G+ + + + +V+KLL V D+M+ PVV T + + + +L
Sbjct: 111 PGTASFMTVVSTCLSTPGCMVTDVRKLL-------VDDIMSSPPVVASRETPVAELSEML 163
Query: 204 LETKYRRLPVVDADG 218
RLP+ D +G
Sbjct: 164 ARHSINRLPICDEEG 178
>gi|410720304|ref|ZP_11359660.1| putative transcriptional regulator, CBS-domain containing protein
[Methanobacterium sp. Maddingley MBC34]
gi|410601086|gb|EKQ55606.1| putative transcriptional regulator, CBS-domain containing protein
[Methanobacterium sp. Maddingley MBC34]
Length = 158
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 63/115 (54%), Gaps = 9/115 (7%)
Query: 111 LVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFP------EVDSTWK-T 163
L E +I+G PV++ + +LVG++S+ D++ L + + P E+ K
Sbjct: 28 LRENKISGAPVMNKEGQLVGIISEGDIMRLLEVHSPHI--RLILPSPLDLIELPVRMKYE 85
Query: 164 FNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADG 218
+E+ + ++K ++G++MT V + ++ DAA+L+ +RLPV+D+DG
Sbjct: 86 MDEIAEDMNKAASLLIGEIMTKKVVTITPDADISDAAQLMDTHDVKRLPVLDSDG 140
>gi|386360358|ref|YP_006058603.1| signal transduction protein [Thermus thermophilus JL-18]
gi|383509385|gb|AFH38817.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Thermus thermophilus JL-18]
Length = 153
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 71/137 (51%), Gaps = 12/137 (8%)
Query: 85 VGDFMTTKEELHVVKPT-TTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
V D MT+ VV P TT+D+ +++E+RI V+D+ +LVG+V++ D L I
Sbjct: 7 VKDVMTSP---AVVVPLGTTLDQVAALMLERRIGSVLVVDEKGRLVGIVTESDFLKEKGI 63
Query: 144 SGSG-RADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPV-VVRETTNLEDAAR 201
S RA P + + +++++L + V ++MT APV V L A +
Sbjct: 64 PFSTFRA-----PLLLGRFLNGGQLERILQEAKATRVEEIMT-APVHTVAPEAPLRQALK 117
Query: 202 LLLETKYRRLPVVDADG 218
++L R+PVVD +G
Sbjct: 118 VMLAYDINRVPVVDEEG 134
>gi|302785239|ref|XP_002974391.1| hypothetical protein SELMODRAFT_101308 [Selaginella moellendorffii]
gi|300157989|gb|EFJ24613.1| hypothetical protein SELMODRAFT_101308 [Selaginella moellendorffii]
Length = 236
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
Query: 79 SSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 138
SS VGD MT + +L V P+T V +A+E++ EKRI PV+ D K++G+VS D++
Sbjct: 126 SSKTTKVGDIMTEENKLITVTPSTRVLQAMELMTEKRIRHIPVVKDK-KMLGMVSIGDVV 184
>gi|374998002|ref|YP_004973501.1| hypothetical protein Desor_5620 [Desulfosporosinus orientis DSM
765]
gi|357216368|gb|AET70986.1| CBS domain-containing protein [Desulfosporosinus orientis DSM 765]
Length = 208
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 66/133 (49%), Gaps = 20/133 (15%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V FMT ++ V P+ ++ + + ++ EK+IT PV++ KLVG V+D DL
Sbjct: 3 VRQFMTA--QVFTVNPSESIADTMALMREKKITRMPVVEK-GKLVGFVTDGDL------- 52
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+ P +T F E+ L++KT + ++ + R T +EDAA L+
Sbjct: 53 ------REVSPSPATTLSIF-ELNYLIAKTP---IREVAIKKVITCRPDTQIEDAAMLMR 102
Query: 205 ETKYRRLPVVDAD 217
+ K LPVV+ D
Sbjct: 103 DHKIGGLPVVEGD 115
>gi|375096602|ref|ZP_09742867.1| CBS-domain-containing membrane protein [Saccharomonospora marina
XMU15]
gi|374657335|gb|EHR52168.1| CBS-domain-containing membrane protein [Saccharomonospora marina
XMU15]
Length = 225
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 64/135 (47%), Gaps = 11/135 (8%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TV D M K + V T + + +L E RI+ V+D+ +G+VS+ DLLA +
Sbjct: 5 TVADVM--KRPVVTVDAQTPFKDIVSLLAEHRISAVAVVDEGRHPLGVVSEADLLAKEDQ 62
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
G+ S+F E+ W+ + +K G ++MT + L AAR L
Sbjct: 63 RGTAHP-PSVFTEL-RRWRRW-------TKARGATAREVMTRHVRTIHREEPLAVAARRL 113
Query: 204 LETKYRRLPVVDADG 218
E + RRL V+D+ G
Sbjct: 114 AEGRLRRLFVIDSSG 128
>gi|429850172|gb|ELA25470.1| cbs and pb1 domain protein [Colletotrichum gloeosporioides Nara
gc5]
Length = 520
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 54/120 (45%), Gaps = 26/120 (21%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
+KP TTV EA +++ KR V DDD ++ G+ + DL + G+G+
Sbjct: 209 IKPATTVAEAAQLMAAKREDCVLVTDDDDRIAGIFTAKDLAF--RVVGAGQ--------- 257
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
K N + ++MT P+ R T+ DA L++ +R LPV+D +
Sbjct: 258 ---------------KPNHITIAEIMTKNPLCARTDTSATDALDLMVRKGFRHLPVMDEN 302
>gi|170695632|ref|ZP_02886775.1| putative signal-transduction protein with CBS domains [Burkholderia
graminis C4D1M]
gi|170139431|gb|EDT07616.1| putative signal-transduction protein with CBS domains [Burkholderia
graminis C4D1M]
Length = 229
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 57/116 (49%), Gaps = 5/116 (4%)
Query: 100 PTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDS 159
P T+ + ++ V+ I+G PV+D D +VG++S+ DLL I D +
Sbjct: 16 PDMTIRQVAKMFVDNGISGAPVLDTDGSIVGIISEGDLLRRSEIG----TDETRRASWLD 71
Query: 160 TWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVD 215
W +E + + KT+ V D+MT V V+ T L + A +L +R+PV +
Sbjct: 72 FWSARHEARDYV-KTHAAKVSDVMTTDVVTVQPDTPLGEVAGILEARHVKRVPVTE 126
>gi|85709821|ref|ZP_01040886.1| hypothetical protein NAP1_13088 [Erythrobacter sp. NAP1]
gi|85688531|gb|EAQ28535.1| hypothetical protein NAP1_13088 [Erythrobacter sp. NAP1]
Length = 143
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 55/117 (47%), Gaps = 27/117 (23%)
Query: 101 TTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDST 160
TT V EA+ +L KRI PV+ D K+ G++S+ D++ + SG D +
Sbjct: 21 TTPVAEAVSLLAGKRIGALPVMRD-GKIAGIISERDVVYRLAESGHDALDMT-------- 71
Query: 161 WKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
VGD+MT V V TT ++DA L+ + ++R PVVD D
Sbjct: 72 ------------------VGDIMTSPAVTVEPTTLIDDALALMTKRRFRHFPVVDND 110
Score = 44.7 bits (104), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 37/55 (67%), Gaps = 3/55 (5%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 138
TVGD MT+ V+PTT +D+AL ++ ++R FPV+D+D KLV +S DL+
Sbjct: 71 TVGDIMTSPAV--TVEPTTLIDDALALMTKRRFRHFPVVDND-KLVAFISIGDLV 122
>gi|390935988|ref|YP_006393547.1| putative transporter [Bifidobacterium bifidum BGN4]
gi|389889601|gb|AFL03668.1| putative transporter [Bifidobacterium bifidum BGN4]
Length = 683
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 56/110 (50%), Gaps = 6/110 (5%)
Query: 111 LVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNE--VQ 168
+ ++ PV++ D +LVG VSD D++ S + ++ ST F++ V
Sbjct: 553 FIRLNVSSLPVVNGDGRLVGFVSDGDVMK----SIATYESRTVSTGTGSTMVVFDDETVA 608
Query: 169 KLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADG 218
+ +GK V D+ T V ++ + AR+L + ++++LPVVD DG
Sbjct: 609 SKVQALSGKKVMDIATRKVVAATPDQHVGEVARILAKKQFKKLPVVDGDG 658
>gi|302807987|ref|XP_002985688.1| hypothetical protein SELMODRAFT_122545 [Selaginella moellendorffii]
gi|300146597|gb|EFJ13266.1| hypothetical protein SELMODRAFT_122545 [Selaginella moellendorffii]
Length = 236
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
Query: 79 SSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 138
SS VGD MT + +L V P+T V +A+E++ EKRI PV+ D K++G+VS D++
Sbjct: 126 SSKTTKVGDIMTEENKLITVTPSTRVLQAMELMTEKRIRHIPVVKDK-KMLGMVSIGDVV 184
>gi|118602320|ref|YP_903535.1| signal-transduction protein [Candidatus Ruthia magnifica str. Cm
(Calyptogena magnifica)]
gi|118567259|gb|ABL02064.1| putative signal-transduction protein with CBS domains [Candidatus
Ruthia magnifica str. Cm (Calyptogena magnifica)]
Length = 146
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 59/133 (44%), Gaps = 18/133 (13%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D M+T + V P + I+V I+G PV+DDD LVG++S+ D+L
Sbjct: 3 VQDIMST--NVKTVTPDQLAKDIAIIMVMDHISGAPVVDDDNNLVGIISEKDILQ----- 55
Query: 145 GSGRADNSMFPEVDS----TWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAA 200
MFP++D T+ F ++ T VG+LMT + + AA
Sbjct: 56 -------HMFPKLDEVMSDTYFDFENMEHNYKNTMNVKVGELMTKDVASIDLSMPCLKAA 108
Query: 201 RLLLETKYRRLPV 213
+ RR+PV
Sbjct: 109 STMWLRNIRRIPV 121
>gi|78043747|ref|YP_359045.1| acetoin utilization protein AcuB [Carboxydothermus hydrogenoformans
Z-2901]
gi|77995862|gb|ABB14761.1| acetoin utilization protein AcuB [Carboxydothermus hydrogenoformans
Z-2901]
Length = 210
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 60/133 (45%), Gaps = 24/133 (18%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D MT EL VK T T+ EA+ EKRI PV+ DD KLVG+VSD DL
Sbjct: 3 VKDIMT--RELITVKSTDTIREAMAKGHEKRIRHLPVV-DDGKLVGIVSDRDLRYACPSP 59
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+G + W+ VGD+M V +E+AA+++L
Sbjct: 60 FTGEKNG-------ECWQI--------------KVGDIMQKRVVTAHPLDPVEEAAKMML 98
Query: 205 ETKYRRLPVVDAD 217
E + LPV+ D
Sbjct: 99 ENRVGCLPVLLDD 111
Score = 37.0 bits (84), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 53/102 (51%), Gaps = 4/102 (3%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL-LALDSI 143
VGD M ++ + P V+EA ++++E R+ PV+ DD +LVG+++ D+ +A +
Sbjct: 73 VGDIM--QKRVVTAHPLDPVEEAAKMMLENRVGCLPVLLDD-ELVGIITQGDIVMAFAEL 129
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTP 185
G + + + +V EV +++ + N +V + P
Sbjct: 130 MGVYKRSSRIEVQVPDRPGMLAEVAQIMKELNINVVSVFLAP 171
>gi|345006584|ref|YP_004809437.1| peptidase M50 [halophilic archaeon DL31]
gi|344322210|gb|AEN07064.1| peptidase M50 [halophilic archaeon DL31]
Length = 392
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 62/134 (46%), Gaps = 30/134 (22%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D MT+KE LH V P +V + ++ + +R TG+PV+ + +LVG+V+ D
Sbjct: 251 VSDVMTSKESLHTVAPDDSVAQLIQRMFRERHTGYPVVKNG-RLVGMVTLGD-------- 301
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+ NEV+ + V D+MT + V ++ +A + +
Sbjct: 302 ----------------AQEVNEVEH-----DAMRVDDVMTTEIITVTPQSDALEALQTMQ 340
Query: 205 ETKYRRLPVVDADG 218
E RL VVDA+G
Sbjct: 341 ENSIGRLAVVDANG 354
Score = 36.6 bits (83), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 42/75 (56%), Gaps = 4/75 (5%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL-ALDSI 143
V D MTT E+ V P + EAL+ + E I V+D + L G++S DL+ A D I
Sbjct: 315 VDDVMTT--EIITVTPQSDALEALQTMQENSIGRLAVVDANGDLCGIISRTDLMTAFDII 372
Query: 144 SGSG-RADNSMFPEV 157
SG ++++S+ P V
Sbjct: 373 QSSGAQSNDSLGPGV 387
>gi|147920793|ref|YP_685401.1| inosine-5\'-monophosphate dehydrogenase [Methanocella arvoryzae
MRE50]
gi|110620797|emb|CAJ36075.1| inosine-5\'-monophosphate dehydrogenase [Methanocella arvoryzae
MRE50]
Length = 491
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 53/119 (44%), Gaps = 31/119 (26%)
Query: 100 PTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDS 159
P T++ + ++ +TGFP+I +D KLVG++S D
Sbjct: 105 PGQTIESVWRAMSDENVTGFPII-EDGKLVGIISRRD----------------------- 140
Query: 160 TWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADG 218
++ ++ GK + ++MT V ET +++A ++ E K RLPV+D G
Sbjct: 141 -------IRPIVKSEPGKKINEVMTRNVVTAAETVTIDEAIDIMYEHKVERLPVIDEKG 192
Score = 37.7 bits (86), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 26/38 (68%)
Query: 101 TTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 138
T T+DEA++I+ E ++ PVID+ LVG++ ++L
Sbjct: 167 TVTIDEAIDIMYEHKVERLPVIDEKGSLVGMILMQNIL 204
>gi|73668035|ref|YP_304050.1| hypothetical protein Mbar_A0488 [Methanosarcina barkeri str.
Fusaro]
gi|72395197|gb|AAZ69470.1| conserved hypothetical protein [Methanosarcina barkeri str. Fusaro]
Length = 302
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/114 (37%), Positives = 55/114 (48%), Gaps = 35/114 (30%)
Query: 105 DEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTF 164
DE L+IL K I+G PV+ D K+VG+V+ +LL PE
Sbjct: 43 DEVLKILKNKHISGVPVLKDS-KVVGVVTRTNLLQ--------------NPE-------- 79
Query: 165 NEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADG 218
E Q L LMT P+ + ++L+ AARLLLE RRLPVVD DG
Sbjct: 80 -EEQLAL----------LMTRGPITISSGSDLQTAARLLLEHHIRRLPVVD-DG 121
Score = 38.1 bits (87), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 34/158 (21%), Positives = 73/158 (46%), Gaps = 21/158 (13%)
Query: 81 GVYTVGDFMTTKEELHVVKPTTTVDE--------------ALEILVEKRITGFPVIDDDW 126
G+ TV D + T ++++ P E A I+ + PV+D +
Sbjct: 125 GLVTVADIIGTIADMNIDIPIKDYVEKEVVAIYSETPLPVAARIMELAGVKAVPVLDSNL 184
Query: 127 KLVGLVSDYDLLALDSISGSGR-ADNSMFPEVDS-TWKTFNEVQKLLSKTN----GKMVG 180
+L+G++SD D++A I S +D S + D+ TW++ + + + ++G
Sbjct: 185 ELIGIISDRDVIAASIIEDSVEMSDMSAGQDDDAWTWESMRDTMSIYYSVSRIKVPNLIG 244
Query: 181 -DLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
D+M P+ T++ D AR + + ++P+++++
Sbjct: 245 SDIMIREPITATYITSVSDCARKMKRNRIDQVPIINSN 282
>gi|386844881|ref|YP_006249939.1| hypothetical protein SHJG_8802 [Streptomyces hygroscopicus subsp.
jinggangensis 5008]
gi|374105182|gb|AEY94066.1| hypothetical protein SHJG_8802 [Streptomyces hygroscopicus subsp.
jinggangensis 5008]
gi|451798171|gb|AGF68220.1| hypothetical protein SHJGH_8558 [Streptomyces hygroscopicus subsp.
jinggangensis TL01]
Length = 215
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 67/142 (47%), Gaps = 17/142 (11%)
Query: 79 SSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 138
S + V D MT + V + +E + E +++ PV++ D +++G+VS+ DLL
Sbjct: 2 ESSPHRVSDVMT--RAVVAVSRKARFKDIVERMEEWKVSALPVLEGDGRVIGVVSEADLL 59
Query: 139 ALDSISGSGRADNSMFPEVDSTWKTFNEVQKL--LSKTNGKMVGDLMTPAPVVVRETTNL 196
+++ DS F ++ L L K +LM+ V V L
Sbjct: 60 PKEALR-------------DSNPDRFTPMRHLTDLDKAGAMSAEELMSTPAVTVHGDATL 106
Query: 197 EDAARLLLETKYRRLPVVDADG 218
+AAR++ + +RLPVV+A+G
Sbjct: 107 AEAARIMALRQVKRLPVVNAEG 128
>gi|154487114|ref|ZP_02028521.1| hypothetical protein BIFADO_00954 [Bifidobacterium adolescentis
L2-32]
gi|154084977|gb|EDN84022.1| drug resistance MFS transporter, drug:H+ antiporter-2 family
[Bifidobacterium adolescentis L2-32]
Length = 692
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 56/110 (50%), Gaps = 6/110 (5%)
Query: 111 LVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNE--VQ 168
+ ++ PV++ D +LVG VSD D++ S + ++ ST F++ V
Sbjct: 562 FIRLNVSSLPVVNGDGRLVGFVSDGDVMK----SIATYESRTVSTGTGSTMVVFDDETVA 617
Query: 169 KLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADG 218
+ +GK V D+ T V ++ + AR+L + ++++LPVVD DG
Sbjct: 618 SKVQALSGKKVMDIATRKVVAATPDQHVGEVARILAKKQFKKLPVVDGDG 667
>gi|307104771|gb|EFN53023.1| hypothetical protein CHLNCDRAFT_59753 [Chlorella variabilis]
Length = 209
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 56/132 (42%), Gaps = 38/132 (28%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEIL-VEKRITGFPVIDDDWKLVGLVSDYDLLALDSISG 145
D M T L V P ++ E +L I G PV+D D KLVG+VS DL
Sbjct: 81 DVMQTN--LVVTSPGASLAEVTALLDGPPSIEGMPVVDGDNKLVGVVSRKDL-------- 130
Query: 146 SGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLE 205
G +V D+M+ PV ++ + + DAA ++++
Sbjct: 131 ---------------------------AKGGALVQDIMSSTPVSLKASGKVADAAEIMIK 163
Query: 206 TKYRRLPVVDAD 217
K+ R+PVVD D
Sbjct: 164 HKFHRVPVVDDD 175
>gi|348500781|ref|XP_003437951.1| PREDICTED: 5'-AMP-activated protein kinase subunit gamma-2-like
[Oreochromis niloticus]
Length = 641
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 60/124 (48%), Gaps = 5/124 (4%)
Query: 84 TVGDF-MTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS 142
T+G+ + T ++ + P T + +AL I VE+R++ PV+DD K+V + S +D++ L +
Sbjct: 496 TLGELGIGTYHDIAFIHPDTPIIKALNIFVERRVSALPVVDDSGKVVDIYSKFDVINLAA 555
Query: 143 ISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAP----VVVRETTNLED 198
D S+ + + F V K + + D + A VVV E +++E
Sbjct: 556 EKTYNNLDISVTQALKHRSQYFEGVMKCHKMETMETIVDRIVKAEVHRLVVVDERSSIEG 615
Query: 199 AARL 202
L
Sbjct: 616 IVSL 619
>gi|310286641|ref|YP_003937899.1| multidrug resistance transporter [Bifidobacterium bifidum S17]
gi|309250577|gb|ADO52325.1| multidrug resistance transporter, Major Facilitator Superfamily
[Bifidobacterium bifidum S17]
Length = 683
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 56/110 (50%), Gaps = 6/110 (5%)
Query: 111 LVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNE--VQ 168
+ ++ PV++ D +LVG VSD D++ S + ++ ST F++ V
Sbjct: 553 FIRLNVSSLPVVNGDGRLVGFVSDGDVMK----SIATYESRTVSTGTGSTMVVFDDETVA 608
Query: 169 KLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADG 218
+ +GK V D+ T V ++ + AR+L + ++++LPVVD DG
Sbjct: 609 SKVQALSGKKVMDIATRKVVAATPDQHVGEVARILAKKQFKKLPVVDGDG 658
>gi|338730638|ref|YP_004660030.1| inosine-5'-monophosphate dehydrogenase [Thermotoga thermarum DSM
5069]
gi|335364989|gb|AEH50934.1| inosine-5'-monophosphate dehydrogenase [Thermotoga thermarum DSM
5069]
Length = 487
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 58/120 (48%), Gaps = 34/120 (28%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
+ P T+++ALE++ RI G PVID+D KL+GL+++ D+
Sbjct: 98 IGPEDTIEKALELMATYRIGGLPVIDEDGKLLGLITNRDV-------------------- 137
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAP--VVVRETTNLEDAARLLLETKYRRLPVVD 215
+K L++ V +LMTP +V + +L++A +L K +LP+VD
Sbjct: 138 --------RFEKDLTRP----VKELMTPRSQLIVAPPSISLDEAKEILHRNKIEKLPLVD 185
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 37/56 (66%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLAL 140
V + MT + +L V P+ ++DEA EIL +I P++DD KLVGL++ D++++
Sbjct: 147 VKELMTPRSQLIVAPPSISLDEAKEILHRNKIEKLPLVDDSNKLVGLITIKDIMSV 202
>gi|125545649|gb|EAY91788.1| hypothetical protein OsI_13431 [Oryza sativa Indica Group]
Length = 233
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 138
VGD MT + +L VKP T V +A++++ EKRI PVID +VG+VS D++
Sbjct: 159 VGDIMTEENQLITVKPDTRVLQAMQLMTEKRIRHIPVIDGT-GMVGMVSIGDIV 211
>gi|288561286|ref|YP_003424772.1| CBS domain-containing protein [Methanobrevibacter ruminantium M1]
gi|288543996|gb|ADC47880.1| CBS domain-containing protein [Methanobrevibacter ruminantium M1]
Length = 283
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 63/133 (47%), Gaps = 34/133 (25%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D+MT + + V+ + ++ + ++ E + G+PV+D++ +VG+++ YDLL D
Sbjct: 13 VRDYMT--KNVITVRYDSLNNDVIALMKETKHDGYPVVDEEGHIVGIITAYDLLLKD--- 67
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
W+T + V +M+ +V RE ++ DA+R++
Sbjct: 68 ----------------WET-------------EYVKSIMSQEVIVAREDMHINDASRVMF 98
Query: 205 ETKYRRLPVVDAD 217
RLPVVD +
Sbjct: 99 RHGISRLPVVDKE 111
>gi|116249487|ref|YP_765325.1| hypothetical protein pRL90028 [Rhizobium leguminosarum bv. viciae
3841]
gi|115254135|emb|CAK03738.1| conserved hypothetical protein [Rhizobium leguminosarum bv. viciae
3841]
Length = 214
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 56/104 (53%), Gaps = 5/104 (4%)
Query: 111 LVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKL 170
+++ +I+G PV+D + LVG+VSD D L ++ + R + + + S K +E
Sbjct: 1 MLDNKISGLPVVDANGALVGIVSDGDFLRRSELN-TERKRSWLLEWLTSPGKIADE---- 55
Query: 171 LSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVV 214
+ +G+ V ++MT + T ++ DA RL+ +RLPVV
Sbjct: 56 YVRAHGRRVEEVMTAPVSAIAPTASISDAVRLMERRDIKRLPVV 99
>gi|116748379|ref|YP_845066.1| hypothetical protein Sfum_0935 [Syntrophobacter fumaroxidans MPOB]
gi|116697443|gb|ABK16631.1| CBS domain containing membrane protein [Syntrophobacter
fumaroxidans MPOB]
Length = 225
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 53/121 (43%), Gaps = 16/121 (13%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P + E E+L + PV+D++ +LVG+V+D D+ S P
Sbjct: 14 VGPNDGILETRELLAKSSFRHLPVVDEENRLVGIVTDRDI-------------RSAMP-- 58
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
S + NE K + + D+MT PV V LEDA L+ + PVVD +
Sbjct: 59 -SVFLDENETLKERERLAQMKIKDIMTKNPVTVNPANTLEDAILLMQRMRVGAFPVVDRE 117
Query: 218 G 218
G
Sbjct: 118 G 118
>gi|398787517|ref|ZP_10549911.1| CBS domain containing membrane protein [Streptomyces auratus
AGR0001]
gi|396992876|gb|EJJ03965.1| CBS domain containing membrane protein [Streptomyces auratus
AGR0001]
Length = 202
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 57/122 (46%), Gaps = 29/122 (23%)
Query: 97 VVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPE 156
VV+ TT E +L E IT PV+D+D ++VG+VS+ DLL
Sbjct: 11 VVQRGTTFKEIARLLDEYEITAVPVVDEDEQVVGVVSEADLL------------------ 52
Query: 157 VDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDA 216
++ ++K +MT VV R ++ +AA+L+ + K +RLPV+D
Sbjct: 53 -----------RRQIAKLGSTTAEAIMTSPAVVARPGWSVVEAAKLMEQKKVKRLPVIDD 101
Query: 217 DG 218
G
Sbjct: 102 AG 103
Score = 37.7 bits (86), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 8/63 (12%)
Query: 179 VGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGW--------NYHKRKCSKGG 230
+ DLMTP VVV+ T ++ ARLL E + +PVVD D + +R+ +K G
Sbjct: 1 MADLMTPHAVVVQRGTTFKEIARLLDEYEITAVPVVDEDEQVVGVVSEADLLRRQIAKLG 60
Query: 231 SSN 233
S+
Sbjct: 61 STT 63
>gi|313139333|ref|ZP_07801526.1| conserved hypothetical protein [Bifidobacterium bifidum NCIMB
41171]
gi|313131843|gb|EFR49460.1| conserved hypothetical protein [Bifidobacterium bifidum NCIMB
41171]
Length = 692
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 56/110 (50%), Gaps = 6/110 (5%)
Query: 111 LVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNE--VQ 168
+ ++ PV++ D +LVG VSD D++ S + ++ ST F++ V
Sbjct: 562 FIRLNVSSLPVVNGDGRLVGFVSDGDVMK----SIATYESRTVSTGTGSTMVVFDDETVA 617
Query: 169 KLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADG 218
+ +GK V D+ T V ++ + AR+L + ++++LPVVD DG
Sbjct: 618 SKVQALSGKKVMDIATRKVVAATPDQHVGEVARILAKKQFKKLPVVDGDG 667
>gi|337282449|ref|YP_004621920.1| CBS domain-containing protein [Streptococcus parasanguinis ATCC
15912]
gi|335370042|gb|AEH55992.1| CBS domain protein [Streptococcus parasanguinis ATCC 15912]
Length = 253
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 74/146 (50%), Gaps = 22/146 (15%)
Query: 74 NSAAPSSG--VYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGL 131
N S G V V DFMT K + + P TT+ A +++ E+ + PVI++D KLVGL
Sbjct: 25 NKTNKSIGELVMAVKDFMTRK--VVYISPDTTIAHAADLMREQGLHRLPVIEND-KLVGL 81
Query: 132 VSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVR 191
V++ + A+ S P ++ F E+ LL+KT V D+M + V
Sbjct: 82 VTEGTI-----------AEAS--PSKATSLSIF-EMNYLLNKTK---VKDVMLRDVITVS 124
Query: 192 ETTNLEDAARLLLETKYRRLPVVDAD 217
+ +LEDA L+ + K LPVVD +
Sbjct: 125 KFASLEDATYLMYKNKVGILPVVDNE 150
>gi|23465493|ref|NP_696096.1| efflux transporter protein [Bifidobacterium longum NCC2705]
gi|322688919|ref|YP_004208653.1| transport protein [Bifidobacterium longum subsp. infantis 157F]
gi|23326150|gb|AAN24732.1| possible efflux transporter protein [Bifidobacterium longum
NCC2705]
gi|320460255|dbj|BAJ70875.1| putative transport protein [Bifidobacterium longum subsp. infantis
157F]
Length = 683
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 56/110 (50%), Gaps = 6/110 (5%)
Query: 111 LVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNE--VQ 168
+ ++ PV++ D +LVG VSD D++ S + ++ ST F++ V
Sbjct: 553 FIRLNVSSLPVVNGDGRLVGFVSDGDVMK----SIATYESRTVSTGTGSTMVVFDDETVA 608
Query: 169 KLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADG 218
+ +GK V D+ T V ++ + AR+L + ++++LPVVD DG
Sbjct: 609 SKVQALSGKKVMDIATRKVVAATPDQHVGEVARILAKKQFKKLPVVDGDG 658
>gi|423069005|ref|ZP_17057793.1| hypothetical protein HMPREF9682_01014 [Streptococcus intermedius
F0395]
gi|355365405|gb|EHG13128.1| hypothetical protein HMPREF9682_01014 [Streptococcus intermedius
F0395]
Length = 218
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 69/131 (52%), Gaps = 20/131 (15%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT K + + P TTV A +I+ + + PVI++D +LVGLV++ +I+
Sbjct: 3 VKDFMTRK--VVYISPDTTVAHAADIMRAQELHRLPVIEND-QLVGLVTE------GTIA 53
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+ + +T + E+ LL+KT K D+M V V + +LEDA L+L
Sbjct: 54 EASPSK--------ATSLSIYEMNYLLNKTKIK---DVMIRDVVTVSQFASLEDATYLML 102
Query: 205 ETKYRRLPVVD 215
+ K LPVVD
Sbjct: 103 KNKIGILPVVD 113
>gi|227545976|ref|ZP_03976025.1| efflux transporter protein [Bifidobacterium longum subsp. longum
ATCC 55813]
gi|227213610|gb|EEI81459.1| efflux transporter protein [Bifidobacterium longum subsp. infantis
ATCC 55813]
Length = 683
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 56/110 (50%), Gaps = 6/110 (5%)
Query: 111 LVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNE--VQ 168
+ ++ PV++ D +LVG VSD D++ S + ++ ST F++ V
Sbjct: 553 FIRLNVSSLPVVNGDGRLVGFVSDGDVMK----SIATYESRTVSTGTGSTMVVFDDETVA 608
Query: 169 KLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADG 218
+ +GK V D+ T V ++ + AR+L + ++++LPVVD DG
Sbjct: 609 SKVQALSGKKVMDIATRKVVAATPDQHVGEVARILAKKQFKKLPVVDGDG 658
>gi|311063535|ref|YP_003970260.1| Multidrug resistance protein B [Bifidobacterium bifidum PRL2010]
gi|310865854|gb|ADP35223.1| Multidrug resistance protein B [Bifidobacterium bifidum PRL2010]
Length = 683
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 56/110 (50%), Gaps = 6/110 (5%)
Query: 111 LVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNE--VQ 168
+ ++ PV++ D +LVG VSD D++ S + ++ ST F++ V
Sbjct: 553 FIRLNVSSLPVVNGDGRLVGFVSDGDVMK----SIATYESRTVSTGTGSTMVVFDDETVA 608
Query: 169 KLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADG 218
+ +GK V D+ T V ++ + AR+L + ++++LPVVD DG
Sbjct: 609 SKVQALSGKKVMDIATRKVVAATPDQHVGEVARILAKKQFKKLPVVDGDG 658
>gi|255534552|ref|YP_003094923.1| Inosine-5'-monophosphate dehydrogenase [Flavobacteriaceae bacterium
3519-10]
gi|255340748|gb|ACU06861.1| Inosine-5'-monophosphate dehydrogenase [Flavobacteriaceae bacterium
3519-10]
Length = 486
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 61/115 (53%), Gaps = 31/115 (26%)
Query: 103 TVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWK 162
T+ EA E++ +I+G PV+D D KL+G++++ D+ +++S
Sbjct: 108 TLMEAKEMMANFKISGLPVVDADNKLIGIITNRDVKYQENLSA----------------- 150
Query: 163 TFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
+V++L++K L+T + TNLE A ++LL+ + +LP+VD++
Sbjct: 151 ---KVEELMTKDK------LITS-----DKATNLEQAKQILLKNRVEKLPIVDSE 191
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 33/49 (67%)
Query: 89 MTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL 137
+ TK++L T +++A +IL++ R+ P++D ++KLVGL++ D+
Sbjct: 155 LMTKDKLITSDKATNLEQAKQILLKNRVEKLPIVDSEFKLVGLITIKDI 203
>gi|410095930|ref|ZP_11290922.1| inosine-5'-monophosphate dehydrogenase [Parabacteroides goldsteinii
CL02T12C30]
gi|409227961|gb|EKN20856.1| inosine-5'-monophosphate dehydrogenase [Parabacteroides goldsteinii
CL02T12C30]
Length = 491
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 57/113 (50%), Gaps = 31/113 (27%)
Query: 104 VDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKT 163
V +AL ++ E +I G PV+D+ LVG+V++ DL R + M +D
Sbjct: 110 VADALAMMAEYKIGGIPVVDEGGYLVGIVTNRDL----------RFERDMNRSID----- 154
Query: 164 FNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDA 216
++++K N VV ++T+LE AA++L + K +LPVVD+
Sbjct: 155 -----EVMTKEN-----------LVVTDQSTDLEAAAQILQQHKIEKLPVVDS 191
Score = 39.7 bits (91), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 44/89 (49%), Gaps = 3/89 (3%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL-ALDSISG 145
D + TKE L V +T ++ A +IL + +I PV+D KL+GLV+ D+ A D S
Sbjct: 154 DEVMTKENLVVTDQSTDLEAAAQILQQHKIEKLPVVDSHNKLIGLVTYKDITKAKDKPSA 213
Query: 146 SGRADNSM--FPEVDSTWKTFNEVQKLLS 172
A + V T+ TF V L+
Sbjct: 214 CKDAKGRLRVAAGVGVTFNTFERVAALVE 242
>gi|289767041|ref|ZP_06526419.1| conserved hypothetical protein [Streptomyces lividans TK24]
gi|289697240|gb|EFD64669.1| conserved hypothetical protein [Streptomyces lividans TK24]
Length = 218
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 59/121 (48%), Gaps = 11/121 (9%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V+ T E +L+E IT PV+D++ + VG+VS+ DL L + G G D S
Sbjct: 12 VQRGTPFKEIAHLLLEYDITAVPVVDEENRPVGVVSEADL--LQKMWG-GEPDGSAE--- 65
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
+ W + K + LMT P+ E+ ++ DA R++ + +RL VVD D
Sbjct: 66 HAEWSRASA-----GKADATDAAGLMTSPPLCALESWSVVDAVRVMARHRIKRLLVVDGD 120
Query: 218 G 218
G
Sbjct: 121 G 121
>gi|289207550|ref|YP_003459616.1| KpsF/GutQ family protein [Thioalkalivibrio sp. K90mix]
gi|288943181|gb|ADC70880.1| KpsF/GutQ family protein [Thioalkalivibrio sp. K90mix]
Length = 325
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 33/56 (58%), Gaps = 2/56 (3%)
Query: 83 YTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 138
T+G MT H +P EALE + KRI PV+DDD +LVG+++ +DLL
Sbjct: 267 LTIGQVMTRGG--HAARPQWLAVEALETMESKRINALPVVDDDQRLVGVLNMHDLL 320
>gi|421733867|ref|ZP_16172962.1| multidrug resistance transporter [Bifidobacterium bifidum LMG
13195]
gi|407078240|gb|EKE51051.1| multidrug resistance transporter [Bifidobacterium bifidum LMG
13195]
Length = 618
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 56/110 (50%), Gaps = 6/110 (5%)
Query: 111 LVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNE--VQ 168
+ ++ PV++ D +LVG VSD D++ S + ++ ST F++ V
Sbjct: 488 FIRLNVSSLPVVNGDGRLVGFVSDGDVMK----SIATYESRTVSTGTGSTMVVFDDETVA 543
Query: 169 KLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADG 218
+ +GK V D+ T V ++ + AR+L + ++++LPVVD DG
Sbjct: 544 SKVQALSGKKVMDIATRKVVAATPDQHVGEVARILAKKQFKKLPVVDGDG 593
>gi|384201729|ref|YP_005587476.1| transporter [Bifidobacterium longum subsp. longum KACC 91563]
gi|338754736|gb|AEI97725.1| transport protein [Bifidobacterium longum subsp. longum KACC 91563]
Length = 683
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 56/110 (50%), Gaps = 6/110 (5%)
Query: 111 LVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNE--VQ 168
+ ++ PV++ D +LVG VSD D++ S + ++ ST F++ V
Sbjct: 553 FIRLNVSSLPVVNGDGRLVGFVSDGDVMK----SIATYESRTVSTGTGSTMVVFDDETVA 608
Query: 169 KLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADG 218
+ +GK V D+ T V ++ + AR+L + ++++LPVVD DG
Sbjct: 609 SKVQALSGKKVMDIATRKVVAATPDQHVGEVARILAKKQFKKLPVVDGDG 658
>gi|119715234|ref|YP_922199.1| hypothetical protein Noca_0991 [Nocardioides sp. JS614]
gi|119535895|gb|ABL80512.1| CBS domain containing protein [Nocardioides sp. JS614]
Length = 196
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 63/140 (45%), Gaps = 29/140 (20%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D MT E V+P+TTV AL L E IT PV+D +L G+VS+ DL+ D ++
Sbjct: 3 VQDLMTP--EPMTVRPSTTVKAALSRLAEFGITCLPVVDGAGRLQGVVSEADLIR-DVVA 59
Query: 145 GSGRAD------NSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLED 198
RA +FP +T EV T PV VR +L
Sbjct: 60 PDPRAQERPVTIEPVFPP-----RTVEEV---------------YTRHPVSVRRNDDLAR 99
Query: 199 AARLLLETKYRRLPVVDADG 218
A ++ T + LPVVD +G
Sbjct: 100 AVDVMTSTAVKSLPVVDDEG 119
>gi|452943411|ref|YP_007499576.1| inosine-5'-monophosphate dehydrogenase [Hydrogenobaculum sp. HO]
gi|452881829|gb|AGG14533.1| inosine-5'-monophosphate dehydrogenase [Hydrogenobaculum sp. HO]
Length = 489
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 58/121 (47%), Gaps = 29/121 (23%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
+K T TV EA +++ + +I+G PV+DD+ KL+G++++ DL + + F +
Sbjct: 101 IKSTDTVQEAKKLMDKYKISGLPVVDDEGKLIGILTNRDLRFV---------KHQDFSKP 151
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
S + T + + +E +LEDA +L K +LP+VD +
Sbjct: 152 ISMFMTSKNL--------------------ITAKEGISLEDATEILRAHKIEKLPIVDDE 191
Query: 218 G 218
G
Sbjct: 192 G 192
>gi|281412873|ref|YP_003346952.1| inosine-5'-monophosphate dehydrogenase [Thermotoga naphthophila
RKU-10]
gi|281373976|gb|ADA67538.1| inosine-5'-monophosphate dehydrogenase [Thermotoga naphthophila
RKU-10]
Length = 482
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 50/90 (55%), Gaps = 3/90 (3%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
+ D MT +E+L V P ++++A EIL + RI P++ D KLVGL++ D++++
Sbjct: 145 IKDLMTPREKLIVAPPDISLEKAKEILHQHRIEKLPLVSKDNKLVGLITIKDIMSVIEHP 204
Query: 145 GSGRADNSMF---PEVDSTWKTFNEVQKLL 171
+ R + V ++ +T V+KL+
Sbjct: 205 NAARDEKGRLLVGAAVGTSPETMERVEKLV 234
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 57/122 (46%), Gaps = 34/122 (27%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P TV EA++++ E +I G PV+D++ +LVGL+++ D+
Sbjct: 96 VTPDMTVKEAIDLMAEYKIGGLPVVDEEGRLVGLLTNRDV-------------------- 135
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAP--VVVRETTNLEDAARLLLETKYRRLPVVD 215
+K LSK + DLMTP +V +LE A +L + + +LP+V
Sbjct: 136 --------RFEKNLSKK----IKDLMTPREKLIVAPPDISLEKAKEILHQHRIEKLPLVS 183
Query: 216 AD 217
D
Sbjct: 184 KD 185
>gi|78357121|ref|YP_388570.1| hypothetical protein [Desulfovibrio alaskensis G20]
gi|78219526|gb|ABB38875.1| CBS domain containing membrane protein [Desulfovibrio alaskensis
G20]
Length = 142
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 62/132 (46%), Gaps = 19/132 (14%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
VGD MTT EL + T T+ A ++ RI P++D+ + +GL++ D+L +IS
Sbjct: 4 VGDLMTT--ELFTLLETDTLKTARSLMQLARIRHIPIVDEHGRFIGLLTHRDILE-ATIS 60
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+NS+ E+DS G V ++M V L DAA +L
Sbjct: 61 RFAEVENSVQDEIDS----------------GIPVSEIMRTDVRRVPPDMRLRDAAEMLF 104
Query: 205 ETKYRRLPVVDA 216
KY LPVV++
Sbjct: 105 RHKYGCLPVVES 116
>gi|372273001|ref|ZP_09509049.1| hypothetical protein MstaS_18049 [Marinobacterium stanieri S30]
Length = 137
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 62/130 (47%), Gaps = 24/130 (18%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D+M T L P T + +A+ L E I+G PV+D + LVG++S+ D L
Sbjct: 7 VQDYMATN--LISFSPETGLFDAIRALQEYGISGAPVVDAEGALVGMLSELDCL------ 58
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
RA +T++E + +G VG M+ + +L +AARL +
Sbjct: 59 ---RA---------ILTQTYHEEEM----GSGGHVGRYMSSPVETIDYGADLTEAARLFI 102
Query: 205 ETKYRRLPVV 214
+ K RR+PVV
Sbjct: 103 DKKLRRMPVV 112
>gi|322391656|ref|ZP_08065124.1| CBS domain protein [Streptococcus peroris ATCC 700780]
gi|321145467|gb|EFX40860.1| CBS domain protein [Streptococcus peroris ATCC 700780]
Length = 218
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 71/137 (51%), Gaps = 21/137 (15%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT K + + P T V A +++ E+ + PVI++D KLVGLV++ +
Sbjct: 3 VKDFMTRK--VVYISPDTNVAHAADLMREQGLHRLPVIEND-KLVGLVTEGTI------- 52
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
A+ S P ++ F E+ LL+KT V D+M V V +LEDA L+L
Sbjct: 53 ----AEAS--PSKATSLSIF-EMNYLLNKTK---VKDVMIRDVVTVSGYASLEDATYLML 102
Query: 205 ETKYRRLPVVDADGWNY 221
+ K LPVVD +G Y
Sbjct: 103 KNKIGILPVVD-NGQLY 118
>gi|254417940|ref|ZP_05031664.1| inosine-5'-monophosphate dehydrogenase [Brevundimonas sp. BAL3]
gi|196184117|gb|EDX79093.1| inosine-5'-monophosphate dehydrogenase [Brevundimonas sp. BAL3]
Length = 485
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 55/121 (45%), Gaps = 32/121 (26%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVID-DDWKLVGLVSDYDLLALDSISGSGRADNSMFPE 156
V P TT+ E EI+ K+ITGFPV+D KLVG+++ D+ R +N +
Sbjct: 98 VGPQTTLGEVREIVARKKITGFPVVDPATGKLVGMLTHRDM----------RFENDLNLT 147
Query: 157 VDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDA 216
S T GDL+T VRE + E+A LL K R+ VVD
Sbjct: 148 AASLMTT----------------GDLIT-----VREGASREEARDLLKTRKIERVIVVDE 186
Query: 217 D 217
D
Sbjct: 187 D 187
>gi|403253709|ref|ZP_10920010.1| inosine-5'-monophosphate dehydrogenase [Thermotoga sp. EMP]
gi|402811243|gb|EJX25731.1| inosine-5'-monophosphate dehydrogenase [Thermotoga sp. EMP]
Length = 482
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 50/90 (55%), Gaps = 3/90 (3%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
+ D MT +E+L V P ++++A EIL + RI P++ D KLVGL++ D++++
Sbjct: 145 IKDLMTPREKLIVAPPDISLEKAKEILHQHRIEKLPLVSKDNKLVGLITIKDIMSVIEHP 204
Query: 145 GSGRADNSMF---PEVDSTWKTFNEVQKLL 171
+ R + V ++ +T V+KL+
Sbjct: 205 NAARDEKGRLLVGAAVGTSPETMERVEKLV 234
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 56/122 (45%), Gaps = 34/122 (27%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P TV EA +++ E +I G PV+D++ +LVGL+++ D+
Sbjct: 96 VTPDMTVKEAFDLMAEYKIGGLPVVDEEGRLVGLLTNRDI-------------------- 135
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAP--VVVRETTNLEDAARLLLETKYRRLPVVD 215
+K LSK + DLMTP +V +LE A +L + + +LP+V
Sbjct: 136 --------RFEKNLSKK----IKDLMTPREKLIVAPPDISLEKAKEILHQHRIEKLPLVS 183
Query: 216 AD 217
D
Sbjct: 184 KD 185
>gi|225352807|ref|ZP_03743830.1| hypothetical protein BIFPSEUDO_04439 [Bifidobacterium
pseudocatenulatum DSM 20438 = JCM 1200]
gi|225156414|gb|EEG69983.1| hypothetical protein BIFPSEUDO_04439 [Bifidobacterium
pseudocatenulatum DSM 20438 = JCM 1200]
Length = 692
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 55/111 (49%), Gaps = 8/111 (7%)
Query: 111 LVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPE-VDSTWKTFNE--V 167
+ ++ PV++ D +LVG VSD D+L ++ P ST F++ V
Sbjct: 562 FIRLNVSSLPVVNGDGRLVGFVSDGDVL-----KAIATYESRTVPTGTGSTMVVFDDETV 616
Query: 168 QKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADG 218
+ +GK V D+ T V ++ + AR+L + ++++LPVVD DG
Sbjct: 617 ASKVQALSGKKVMDIATRKVVAATPDQHVGEVARILAKKQFKKLPVVDGDG 667
>gi|170289271|ref|YP_001739509.1| inosine-5'-monophosphate dehydrogenase [Thermotoga sp. RQ2]
gi|170176774|gb|ACB09826.1| inosine-5'-monophosphate dehydrogenase [Thermotoga sp. RQ2]
Length = 482
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 50/90 (55%), Gaps = 3/90 (3%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
+ D MT +E+L V P ++++A EIL + RI P++ D KLVGL++ D++++
Sbjct: 145 IKDLMTPREKLIVAPPDISLEKAKEILHQHRIEKLPLVSKDNKLVGLITIKDIMSVIEHP 204
Query: 145 GSGRADNSMF---PEVDSTWKTFNEVQKLL 171
+ R + V ++ +T V+KL+
Sbjct: 205 NAARDEKGRLLVGAAVGTSPETMERVEKLV 234
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 57/122 (46%), Gaps = 34/122 (27%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P TV EA++++ E +I G PV+D++ +LVGL+++ D+
Sbjct: 96 VTPDMTVKEAIDLMAEYKIGGLPVVDEEGRLVGLLTNRDV-------------------- 135
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAP--VVVRETTNLEDAARLLLETKYRRLPVVD 215
+K LSK + DLMTP +V +LE A +L + + +LP+V
Sbjct: 136 --------RFEKNLSKK----IKDLMTPREKLIVAPPDISLEKAKEILHQHRIEKLPLVS 183
Query: 216 AD 217
D
Sbjct: 184 KD 185
>gi|320590954|gb|EFX03395.1| cbs and pb1 domain containing protein [Grosmannia clavigera kw1407]
Length = 692
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 54/120 (45%), Gaps = 26/120 (21%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
+KP TTV EA +++ KR V DDD ++ G+ + DL + G+G
Sbjct: 115 IKPNTTVAEAAQLMAAKREDCVLVTDDDDRIAGIFTAKDLAY--RVVGAG---------- 162
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
+K N + ++MT P+ R T+ DA L++ +R LPV+D +
Sbjct: 163 --------------TKANSVTIAEIMTKNPLCARTDTSATDALDLMVRKGFRHLPVMDEN 208
>gi|213692518|ref|YP_002323104.1| EmrB/QacA subfamily drug resistance transporter [Bifidobacterium
longum subsp. infantis ATCC 15697 = JCM 1222]
gi|384199715|ref|YP_005585458.1| putative transport protein [Bifidobacterium longum subsp. infantis
ATCC 15697 = JCM 1222]
gi|213523979|gb|ACJ52726.1| drug resistance transporter, EmrB/QacA subfamily [Bifidobacterium
longum subsp. infantis ATCC 15697 = JCM 1222]
gi|320458667|dbj|BAJ69288.1| putative transport protein [Bifidobacterium longum subsp. infantis
ATCC 15697 = JCM 1222]
Length = 683
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 56/110 (50%), Gaps = 6/110 (5%)
Query: 111 LVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNE--VQ 168
+ ++ PV++ D +LVG VSD D++ S + ++ ST F++ V
Sbjct: 553 FIRLNVSSLPVVNGDGRLVGFVSDGDVMK----SIATYESRTVSTGTGSTMVVFDDETVT 608
Query: 169 KLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADG 218
+ +GK V D+ T V ++ + AR+L + ++++LPVVD DG
Sbjct: 609 SKVQALSGKKVMDIATRKVVAATPDQHVGEVARILAKKQFKKLPVVDGDG 658
>gi|448426713|ref|ZP_21583486.1| peptidase M50 [Halorubrum terrestre JCM 10247]
gi|445679200|gb|ELZ31671.1| peptidase M50 [Halorubrum terrestre JCM 10247]
Length = 394
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 62/135 (45%), Gaps = 30/135 (22%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TV D MT + +LH V T+V + + + E+R TG+PV+D D +LVG+V+ D
Sbjct: 249 TVTDIMTPRGDLHTVSEDTSVADLMGRMFEERHTGYPVLDGD-ELVGMVTLEDA------ 301
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
++ EV++ + + M DL+ P + A + +
Sbjct: 302 ------------------RSVREVERDAYRVDDVMATDLVAADP-----NADALTALQTM 338
Query: 204 LETKYRRLPVVDADG 218
E RLPVVDADG
Sbjct: 339 QEHGVGRLPVVDADG 353
>gi|338729860|ref|YP_004659252.1| putative signal transduction protein with CBS domains [Thermotoga
thermarum DSM 5069]
gi|335364211|gb|AEH50156.1| putative signal transduction protein with CBS domains [Thermotoga
thermarum DSM 5069]
Length = 317
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 54/120 (45%), Gaps = 29/120 (24%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
+KP T+ + EI+ KRI+G PVIDD+ +L+G+VS D++ ++ G D
Sbjct: 28 IKPDRTLKQVKEIMRIKRISGLPVIDDNRRLIGIVSIEDIIK--ALEGGYINDK------ 79
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
V + MT V ++ T L DA + + Y R PVVD +
Sbjct: 80 ---------------------VEERMTRNVVYLKNTDTLRDAIEVFEKYTYGRYPVVDEE 118
>gi|15644099|ref|NP_229148.1| inosine-5'-monophosphate dehydrogenase [Thermotoga maritima MSB8]
gi|148270565|ref|YP_001245025.1| inosine-5'-monophosphate dehydrogenase [Thermotoga petrophila
RKU-1]
gi|418045404|ref|ZP_12683499.1| inosine-5'-monophosphate dehydrogenase [Thermotoga maritima MSB8]
gi|4981907|gb|AAD36418.1|AE001789_3 inosine-5'-monophosphate dehydrogenase [Thermotoga maritima MSB8]
gi|147736109|gb|ABQ47449.1| inosine-5'-monophosphate dehydrogenase [Thermotoga petrophila
RKU-1]
gi|351676289|gb|EHA59442.1| inosine-5'-monophosphate dehydrogenase [Thermotoga maritima MSB8]
Length = 482
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 50/90 (55%), Gaps = 3/90 (3%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
+ D MT +E+L V P ++++A EIL + RI P++ D KLVGL++ D++++
Sbjct: 145 IKDLMTPREKLIVAPPDISLEKAKEILHQHRIEKLPLVSKDNKLVGLITIKDIMSVIEHP 204
Query: 145 GSGRADNSMF---PEVDSTWKTFNEVQKLL 171
+ R + V ++ +T V+KL+
Sbjct: 205 NAARDEKGRLLVGAAVGTSPETMERVEKLV 234
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 57/122 (46%), Gaps = 34/122 (27%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P TV EA++++ E +I G PV+D++ +LVGL+++ D+
Sbjct: 96 VTPDMTVKEAIDLMAEYKIGGLPVVDEEGRLVGLLTNRDV-------------------- 135
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAP--VVVRETTNLEDAARLLLETKYRRLPVVD 215
+K LSK + DLMTP +V +LE A +L + + +LP+V
Sbjct: 136 --------RFEKNLSKK----IKDLMTPREKLIVAPPDISLEKAKEILHQHRIEKLPLVS 183
Query: 216 AD 217
D
Sbjct: 184 KD 185
>gi|376296935|ref|YP_005168165.1| hypothetical protein DND132_2157 [Desulfovibrio desulfuricans
ND132]
gi|323459497|gb|EGB15362.1| CBS domain containing protein [Desulfovibrio desulfuricans ND132]
Length = 225
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 56/116 (48%), Gaps = 16/116 (13%)
Query: 101 TTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDST 160
++V +A EIL EK I FPVID LVG+VSD D+ A S F D+
Sbjct: 17 NSSVLDAAEILREKNIRQFPVIDSAGSLVGIVSDRDIR---------DAMPSKFIPGDAV 67
Query: 161 WKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDA 216
++ + L + GD+MT P+ V + + A LL++ K LPVVD
Sbjct: 68 VESGGGLYTLTA-------GDIMTLDPISVPSDAAMTEVADLLVKHKVGGLPVVDG 116
>gi|367048487|ref|XP_003654623.1| hypothetical protein THITE_136351 [Thielavia terrestris NRRL 8126]
gi|347001886|gb|AEO68287.1| hypothetical protein THITE_136351 [Thielavia terrestris NRRL 8126]
Length = 1055
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 54/120 (45%), Gaps = 26/120 (21%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
+KPTT+V EA +++ KR V DDD ++ G+ + DL + G+G
Sbjct: 106 IKPTTSVAEAAQLMAAKREDCVLVTDDDERIAGIFTAKDLAF--RVVGAGL--------- 154
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
K N + ++MT P+ R T+ DA L++ +R LPV+D +
Sbjct: 155 ---------------KANNVTIAEIMTKNPLCARTDTSATDALDLMVRKGFRHLPVMDEN 199
>gi|170291096|ref|YP_001737912.1| signal transduction protein [Candidatus Korarchaeum cryptofilum
OPF8]
gi|170175176|gb|ACB08229.1| putative signal transduction protein with CBS domains [Candidatus
Korarchaeum cryptofilum OPF8]
Length = 161
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 65/121 (53%), Gaps = 25/121 (20%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
++P TV EA +++ E I G VI ++ +L G+V++ DL+ + GR PE
Sbjct: 29 MRPDGTVYEAAKLMKENNI-GSVVIMEEGELRGIVTERDLITRYIAAEDGRR-----PE- 81
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
+V+ V ++MT P+ +R+ T++++AAR+++E RRL VV+ D
Sbjct: 82 --------DVK----------VSEIMTKDPITIRDNTDIDEAARIMIEKNIRRLIVVNYD 123
Query: 218 G 218
G
Sbjct: 124 G 124
>gi|407473078|ref|YP_006787478.1| hypothetical protein Curi_c05570 [Clostridium acidurici 9a]
gi|407049586|gb|AFS77631.1| CBS domain-containing protein [Clostridium acidurici 9a]
Length = 151
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 68/135 (50%), Gaps = 19/135 (14%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGS 146
D M T + V P T ++E +IL + I+G PV+DDD K+VG+VS+ DLL ++
Sbjct: 5 DIMQT--SVITVGPDTKIEEIAKILSDNNISGVPVVDDD-KIVGIVSEGDLLHKEA---- 57
Query: 147 GRADNSMFPEVD--STWKTF------NEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLED 198
N P + S + +F + ++ + K + ++MT + E T++
Sbjct: 58 ----NPRIPTIYPISAFGSFTYLGDYKKYEEDIKKLSAMKASEIMTTEVISESEDTDINK 113
Query: 199 AARLLLETKYRRLPV 213
A ++++ K R+P+
Sbjct: 114 IASIMIDKKINRIPI 128
>gi|319946507|ref|ZP_08020743.1| CBS domain protein [Streptococcus australis ATCC 700641]
gi|319747338|gb|EFV99595.1| CBS domain protein [Streptococcus australis ATCC 700641]
Length = 220
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 71/136 (52%), Gaps = 20/136 (14%)
Query: 82 VYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALD 141
V V DFMT K + + P TT+ A +++ E+ + PVI++D KLVGLV++ +
Sbjct: 2 VMAVKDFMTRK--VVYISPDTTIAHAADLMREQGLHRLPVIEND-KLVGLVTEGTI---- 54
Query: 142 SISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAAR 201
A+ S P ++ F E+ LL+KT V D+M + V + +LEDA
Sbjct: 55 -------AEAS--PSKATSLSIF-EMNYLLNKTK---VKDVMLRDVITVSKFASLEDATY 101
Query: 202 LLLETKYRRLPVVDAD 217
L+ + K LPVVD +
Sbjct: 102 LMYKNKVGILPVVDNE 117
>gi|302336892|ref|YP_003802098.1| signal transduction protein with CBS domains [Spirochaeta
smaragdinae DSM 11293]
gi|301634077|gb|ADK79504.1| putative signal transduction protein with CBS domains [Spirochaeta
smaragdinae DSM 11293]
Length = 214
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 59/113 (52%), Gaps = 17/113 (15%)
Query: 102 TTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTW 161
T V +A+ ++ ++++ PV+D + KLVG+VS+ DLL P ST
Sbjct: 18 TAVADAMALIHKEKVHRLPVLDKERKLVGIVSEKDLLYAS-------------PSPASTL 64
Query: 162 KTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVV 214
+ E+ LL++ K V MT + V E T +EDAAR++++ LPV+
Sbjct: 65 SVY-EMSALLARLKVKKV---MTKEVITVTEQTLIEDAARIMVDKNVGGLPVM 113
>gi|222111943|ref|YP_002554207.1| signal transduction protein with cbs domains [Acidovorax ebreus
TPSY]
gi|221731387|gb|ACM34207.1| putative signal transduction protein with CBS domains [Acidovorax
ebreus TPSY]
Length = 226
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 68/160 (42%), Gaps = 21/160 (13%)
Query: 59 LRRSSAVFASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITG 118
LR AV A A P + VGD MT V P V++A + L E I
Sbjct: 63 LRLLEAVSAYVQTEQGPAQPRQPLSRVGDVMTRGA--LTVAPDQRVNDAWQTLAEHEIAQ 120
Query: 119 FPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKM 178
PV++D ++VGL+ D+ LD + PE + + ++ +S+
Sbjct: 121 APVVNDQGQVVGLLLRADMAPLD-----------LLPEPGAVKQAIELARRPVSEV---- 165
Query: 179 VGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADG 218
+++P P V + T L A +LL+T LPV D G
Sbjct: 166 ---MVSPVPTVAAD-TELRRVAGVLLDTGLPGLPVTDERG 201
>gi|451981772|ref|ZP_21930117.1| CBS domain containing membrane protein [Nitrospina gracilis 3/211]
gi|451760982|emb|CCQ91382.1| CBS domain containing membrane protein [Nitrospina gracilis 3/211]
Length = 150
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 63/134 (47%), Gaps = 12/134 (8%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA----LDS 142
D MT K + VK T+ E + +E R+ GFPV+DDD L+G+V++ DL+ L
Sbjct: 6 DVMTRK--VVTVKKDLTLRELSNLFLEHRVNGFPVVDDDSVLIGVVTEKDLIEQNKNLHI 63
Query: 143 ISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARL 202
+ D ++ E D + +K + + G V D+ + V T++ + A L
Sbjct: 64 PTVIALFDAVIYLESDEKF------EKEVKRFTGTRVEDIFQQNVLTVEPDTDMNEVATL 117
Query: 203 LLETKYRRLPVVDA 216
+ LPVV+
Sbjct: 118 MANHDIHTLPVVEG 131
>gi|62738150|pdb|1VRD|A Chain A, Crystal Structure Of Inosine-5'-Monophosphate
Dehydrogenase (Tm1347) From Thermotoga Maritima At 2.18
A Resolution
gi|62738151|pdb|1VRD|B Chain B, Crystal Structure Of Inosine-5'-Monophosphate
Dehydrogenase (Tm1347) From Thermotoga Maritima At 2.18
A Resolution
Length = 494
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 50/90 (55%), Gaps = 3/90 (3%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
+ D MT +E+L V P ++++A EIL + RI P++ D KLVGL++ D++++
Sbjct: 157 IKDLMTPREKLIVAPPDISLEKAKEILHQHRIEKLPLVSKDNKLVGLITIKDIMSVIEHP 216
Query: 145 GSGRADNSMF---PEVDSTWKTFNEVQKLL 171
+ R + V ++ +T V+KL+
Sbjct: 217 NAARDEKGRLLVGAAVGTSPETMERVEKLV 246
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 57/122 (46%), Gaps = 34/122 (27%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P TV EA++++ E +I G PV+D++ +LVGL+++ D+
Sbjct: 108 VTPDMTVKEAIDLMAEYKIGGLPVVDEEGRLVGLLTNRDV-------------------- 147
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAP--VVVRETTNLEDAARLLLETKYRRLPVVD 215
+K LSK + DLMTP +V +LE A +L + + +LP+V
Sbjct: 148 --------RFEKNLSKK----IKDLMTPREKLIVAPPDISLEKAKEILHQHRIEKLPLVS 195
Query: 216 AD 217
D
Sbjct: 196 KD 197
>gi|317151879|ref|YP_004119927.1| hypothetical protein Daes_0154 [Desulfovibrio aespoeensis Aspo-2]
gi|316942130|gb|ADU61181.1| CBS domain containing protein [Desulfovibrio aespoeensis Aspo-2]
Length = 224
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 69/134 (51%), Gaps = 19/134 (14%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V ++MT E + + P ++ +A +++ + I+ PV+D+ ++ G+VSD D+
Sbjct: 3 VKNWMT--ENVVTITPERSMMKASKLMKDHGISRLPVVDESGRIAGIVSDRDI------- 53
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
D S P +T +E+ LLS+ K D+MT +R+ +E AA L+L
Sbjct: 54 ----KDAS--PS-KATTLDMHELYYLLSEVKIK---DIMTKKVTTIRDDETVEKAAVLML 103
Query: 205 ETKYRRLPVVDADG 218
E + LPVVD DG
Sbjct: 104 EGNFGGLPVVDGDG 117
Score = 38.1 bits (87), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 37/62 (59%), Gaps = 3/62 (4%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL-ALDSI 143
+ D MT K + ++ TV++A +++E G PV+D D K+VG+++D D+ L I
Sbjct: 78 IKDIMTKK--VTTIRDDETVEKAAVLMLEGNFGGLPVVDGDGKVVGIITDTDIFKVLVEI 135
Query: 144 SG 145
SG
Sbjct: 136 SG 137
>gi|92117482|ref|YP_577211.1| signal-transduction protein [Nitrobacter hamburgensis X14]
gi|91800376|gb|ABE62751.1| putative signal-transduction protein with CBS domains [Nitrobacter
hamburgensis X14]
Length = 226
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 62/123 (50%), Gaps = 15/123 (12%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V T++ +A +++++RI+G PV+D+ +L+G+VS+ D + I G+ R P +
Sbjct: 14 VTADTSILDAANLMLQQRISGLPVVDETGRLIGVVSEGDFVRRSEI-GTQR------PRI 66
Query: 158 DSTWKTF-----NEVQKLLSKTNGKMVGDLMTPAPV-VVRETTNLEDAARLLLETKYRRL 211
W F V + + NG+ V ++MT + E L D RL+ +RL
Sbjct: 67 --RWLEFLMGVAGNVAQDFVRENGRKVWEIMTQDDLCTTTEDMPLADLVRLMERRNVKRL 124
Query: 212 PVV 214
PVV
Sbjct: 125 PVV 127
>gi|212716979|ref|ZP_03325107.1| hypothetical protein BIFCAT_01925 [Bifidobacterium catenulatum DSM
16992 = JCM 1194]
gi|212660264|gb|EEB20839.1| hypothetical protein BIFCAT_01925 [Bifidobacterium catenulatum DSM
16992 = JCM 1194]
Length = 692
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 58/111 (52%), Gaps = 8/111 (7%)
Query: 111 LVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPE-VDSTWKTFNE--V 167
+ ++ PV++ D +LVG VSD D++ SI+ ++ P ST F++ V
Sbjct: 562 FIRLNVSSLPVVNGDGRLVGFVSDGDVM--KSIA---TYESRTVPTGTGSTMVVFDDETV 616
Query: 168 QKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADG 218
+ +GK V D+ T V ++ + AR+L + ++++LPVVD DG
Sbjct: 617 ASKVQALSGKKVMDIATRKVVAATPDQHVGEVARILAKKQFKKLPVVDGDG 667
>gi|160897350|ref|YP_001562932.1| hypothetical protein Daci_1907 [Delftia acidovorans SPH-1]
gi|160362934|gb|ABX34547.1| CBS domain containing membrane protein [Delftia acidovorans SPH-1]
Length = 232
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 62/141 (43%), Gaps = 21/141 (14%)
Query: 78 PSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL 137
P + TV D M+ E V P V++A +L E + PV+D ++VGL+ D+
Sbjct: 88 PRQPLQTVADVMS--HEAVTVSPEAGVNDAWRVLAEHGVAQAPVLDAGGRVVGLLLRADM 145
Query: 138 LALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLE 197
LD + G ++ + + NEV +++P P V TT+L
Sbjct: 146 APLDLLPEPGAIKDA----IALARRPVNEV--------------MISPIPTVA-TTTDLR 186
Query: 198 DAARLLLETKYRRLPVVDADG 218
A +LLET LPV D G
Sbjct: 187 RVAGVLLETGLPGLPVTDEQG 207
>gi|414152863|ref|ZP_11409190.1| putative signal transduction protein with CBS domains
[Desulfotomaculum hydrothermale Lam5 = DSM 18033]
gi|411455245|emb|CCO07092.1| putative signal transduction protein with CBS domains
[Desulfotomaculum hydrothermale Lam5 = DSM 18033]
Length = 148
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 67/133 (50%), Gaps = 20/133 (15%)
Query: 92 KEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS--------- 142
K ++ V T + + +IL +K I+G PV++ + KLVG+V++ DLL ++
Sbjct: 8 KTDVITVTADTNIKDIAQILTDKGISGVPVVNQEGKLVGIVTEGDLLHKEANPRIPKFFG 67
Query: 143 ISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARL 202
I G+ F VD + F ++ L + ++MT + V + T++ A L
Sbjct: 68 ILGA----MIYFGGVDQYREDFKKLAALKA-------SEIMTSEVITVSKETDIRTIATL 116
Query: 203 LLETKYRRLPVVD 215
++E +R+PVV+
Sbjct: 117 MIEHNIKRIPVVE 129
>gi|361127748|gb|EHK99707.1| putative Meiotically up-regulated gene 70 protein [Glarea
lozoyensis 74030]
Length = 698
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 52/120 (43%), Gaps = 26/120 (21%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
+KP TTV EA +++ KR V DDD ++ G+ + DL A + +A N M E+
Sbjct: 110 IKPNTTVAEAAQLMAAKREDCVLVTDDDDRIAGIFTAKDL-AFRVVGAGIKASNVMISEI 168
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
MT P+ R T+ DA L++ +R LPV+D +
Sbjct: 169 -------------------------MTKNPLCARTDTSATDALDLMVRKGFRHLPVMDEN 203
>gi|357634461|ref|ZP_09132339.1| CBS domain containing membrane protein [Desulfovibrio sp. FW1012B]
gi|357583015|gb|EHJ48348.1| CBS domain containing membrane protein [Desulfovibrio sp. FW1012B]
Length = 220
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 57/119 (47%), Gaps = 17/119 (14%)
Query: 99 KPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVD 158
KP T++ +A +++ E PVIDD+ +L G+VSD D+ A S +D
Sbjct: 15 KPGTSIMKAAKLMKENGFHRLPVIDDNGRLAGIVSDRDI---------KEASPSKATTLD 65
Query: 159 STWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
+E+ LLS+ V D+MT + + +E AA L+L LPVVD D
Sbjct: 66 -----MHELYYLLSEIK---VADIMTKKVIFIGPDDTVEKAAVLMLRNNVSGLPVVDGD 116
Score = 40.0 bits (92), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 39/62 (62%), Gaps = 3/62 (4%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL-ALDSI 143
V D MT K + + P TV++A +++ ++G PV+D D K+VG+++D D+ L +I
Sbjct: 78 VADIMTKK--VIFIGPDDTVEKAAVLMLRNNVSGLPVVDGDSKVVGVITDSDIFKVLVNI 135
Query: 144 SG 145
+G
Sbjct: 136 TG 137
>gi|452994600|emb|CCQ93804.1| inosine-monophosphate dehydrogenase [Clostridium ultunense Esp]
Length = 483
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 34/51 (66%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL 137
D + TKE L TT+DEALEI+ + +I P+ID+D+KL GL++ D+
Sbjct: 149 DDVMTKENLVTGTRETTMDEALEIMKQHKIEKLPLIDEDYKLAGLITIKDI 199
Score = 41.6 bits (96), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 56/116 (48%), Gaps = 35/116 (30%)
Query: 104 VDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKT 163
V +ALE++ I+G P+I++D LVG++++ D+ E D+T K
Sbjct: 105 VSDALELMERYHISGVPIIEEDGTLVGIITNRDIRF----------------ETDTTKK- 147
Query: 164 FNEVQKLLSKTNGKMVGDLMTPAPVV--VRETTNLEDAARLLLETKYRRLPVVDAD 217
+ D+MT +V RETT +++A ++ + K +LP++D D
Sbjct: 148 ---------------IDDVMTKENLVTGTRETT-MDEALEIMKQHKIEKLPLIDED 187
>gi|88603870|ref|YP_504048.1| inosine-5'-monophosphate dehydrogenase [Methanospirillum hungatei
JF-1]
gi|88189332|gb|ABD42329.1| inosine-5'-monophosphate dehydrogenase [Methanospirillum hungatei
JF-1]
Length = 486
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 58/127 (45%), Gaps = 31/127 (24%)
Query: 92 KEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADN 151
+ E+ V P + + + ++ I G PV++D K++G+VS DL A+
Sbjct: 97 QREVLTVTPDSLIADVDRMMTYHGIGGVPVVED-GKVIGIVSRRDLRAM----------- 144
Query: 152 SMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRL 211
+S+ + V +MT P+V +E +++DA L+ K RL
Sbjct: 145 -------------------VSRIGNQPVKSIMTHEPIVAKEGISIDDAFDLMYSRKVERL 185
Query: 212 PVVDADG 218
PVVD++G
Sbjct: 186 PVVDSEG 192
>gi|384541158|ref|YP_005725241.1| hypothetical protein SM11_pC1359 [Sinorhizobium meliloti SM11]
gi|336036501|gb|AEH82432.1| hypothetical protein SM11_pC1359 [Sinorhizobium meliloti SM11]
Length = 103
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 62/114 (54%), Gaps = 18/114 (15%)
Query: 85 VGDFMTTKEELHVVK--PTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL---A 139
V D MTTK VVK P +V +A +++ + ++G PV+DDD +L+G++S+ DL+
Sbjct: 3 VKDVMTTK----VVKLSPDNSVRQAAKLMFDHHVSGVPVVDDDGRLLGVISEGDLIRRAE 58
Query: 140 LDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRET 193
L S + AD ++ P+ + + + + + VGD+MT PV + E
Sbjct: 59 LCSEASVLMADMAIDPD--------DRANAFIRRCSWR-VGDVMTANPVTIEEV 103
>gi|312136467|ref|YP_004003804.1| signal transduction protein with cbs domains [Methanothermus
fervidus DSM 2088]
gi|311224186|gb|ADP77042.1| putative signal transduction protein with CBS domains
[Methanothermus fervidus DSM 2088]
Length = 279
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 62/126 (49%), Gaps = 22/126 (17%)
Query: 93 EELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNS 152
+E+ VV+ ++ A ++++ I+ PVI++D +LVG++S+ D+ +L I G
Sbjct: 9 DEVIVVRENDSISRARNLMLKNDISHLPVINEDEELVGILSETDIASLLKIGGPA----- 63
Query: 153 MFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLP 212
WK + +V +MT PV V +++DAA L+L LP
Sbjct: 64 --------WKR--------RPIDNILVKRIMTKNPVTVSPNEDIKDAADLMLRKDISALP 107
Query: 213 VVDADG 218
VV+ DG
Sbjct: 108 VVE-DG 112
Score = 41.6 bits (96), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 35/55 (63%), Gaps = 2/55 (3%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 138
T GD MT ++L + + +A +I+++ +I PVIDDD KLVG+V+ D++
Sbjct: 224 TAGDIMT--DDLITINQDFDLSKAAKIMIKNKIGSLPVIDDDGKLVGIVTKTDII 276
>gi|288920574|ref|ZP_06414879.1| CBS domain containing membrane protein [Frankia sp. EUN1f]
gi|288347995|gb|EFC82267.1| CBS domain containing membrane protein [Frankia sp. EUN1f]
Length = 216
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 60/134 (44%), Gaps = 17/134 (12%)
Query: 86 GDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISG 145
G+ MT K L +V P V + +L + I PV+ +LVG+V++ D +AL++
Sbjct: 4 GELMTRK--LSIVTPDVPVKDVARLLALRGIGAVPVVSAQGELVGIVTEADFIALEA--- 58
Query: 146 SGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLE 205
R D+ + D + VG+LM+ V R T++ D ++L
Sbjct: 59 --RPDSRLHARRDRNPRPAAP----------GTVGELMSSPVVTARVDTDIADIVGVMLA 106
Query: 206 TKYRRLPVVDADGW 219
R+P++D G
Sbjct: 107 QHISRVPILDEAGM 120
>gi|124023450|ref|YP_001017757.1| IMP dehydrogenase-like protein [Prochlorococcus marinus str. MIT
9303]
gi|123963736|gb|ABM78492.1| IMP dehydrogenase-like protein [Prochlorococcus marinus str. MIT
9303]
Length = 156
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 69/136 (50%), Gaps = 12/136 (8%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TV D M+T + V P T++ EA++++ + I+G PV++DD LVG +++ DL+ +S
Sbjct: 6 TVKDVMSTP--VLSVVPATSLQEAVQLMTDHHISGLPVVNDDGTLVGELTEQDLMVRESG 63
Query: 144 SGSG----RADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDA 199
+G D+ ++ W +V ++L G V DLM E L A
Sbjct: 64 VDAGPYVLLLDSVIYLRNPLNWD--KQVHQVL----GTSVNDLMRSDTHTCNEALPLPRA 117
Query: 200 ARLLLETKYRRLPVVD 215
A +L + +RL V++
Sbjct: 118 AAMLHDRSTQRLFVIN 133
>gi|357420278|ref|YP_004933270.1| signal transduction protein with CBS domains [Thermovirga lienii
DSM 17291]
gi|355397744|gb|AER67173.1| putative signal transduction protein with CBS domains [Thermovirga
lienii DSM 17291]
Length = 152
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 64/130 (49%), Gaps = 8/130 (6%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
+G+ M +L + P TT+ EA+E+L R++G PV D++ +LVG +S+ D++ +
Sbjct: 3 IGELMD--RDLTALFPETTIAEAVEVLSTHRVSGLPVADEEGRLVGFISENDII---RAA 57
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
G D F + S F + K L K + V M + E + A +++
Sbjct: 58 LPGYFD---FLKDPSFLPDFGQFGKRLLKISNDPVEKYMVKKVIAFDENDSDFQVAMIMM 114
Query: 205 ETKYRRLPVV 214
++ +R PV+
Sbjct: 115 KSNLKRAPVL 124
>gi|167629788|ref|YP_001680287.1| cbs domain [Heliobacterium modesticaldum Ice1]
gi|167592528|gb|ABZ84276.1| cbs domain [Heliobacterium modesticaldum Ice1]
Length = 151
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 63/127 (49%), Gaps = 14/127 (11%)
Query: 94 ELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSM 153
E++ V P T V + +++++EKRI+G PVI ++G++S+ DLL D +
Sbjct: 10 EVYTVYPDTPVADVVKLMIEKRISGVPVISRQGDVIGIISEGDLLFKDK--------DLR 61
Query: 154 FPEVDSTW--KTFNEVQKLLSKTNGKMVG----DLMTPAPVVVRETTNLEDAARLLLETK 207
+P S + E K ++ K + ++MT + V E + + A L+ E +
Sbjct: 62 YPSFISLLGGMIYLESPKRFAEEFRKSIALRAEEIMTGDVITVEEEARVSEMAGLMTEQQ 121
Query: 208 YRRLPVV 214
RLPV+
Sbjct: 122 VNRLPVL 128
>gi|154151769|ref|YP_001405387.1| signal transduction protein [Methanoregula boonei 6A8]
gi|154000321|gb|ABS56744.1| putative signal transduction protein with CBS domains
[Methanoregula boonei 6A8]
Length = 249
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 58/123 (47%), Gaps = 25/123 (20%)
Query: 93 EELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNS 152
+++ V P T+ + + E T FPV+ +LVGL+S DL+ SG
Sbjct: 134 KKIQTVDPADTLQQVYAKITECGFTAFPVVKK-RRLVGLISRRDLIR----SGG------ 182
Query: 153 MFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLP 212
V+ +++ + + VGD+M P + V + L +AARL+++ RLP
Sbjct: 183 --------------VRSAIAQNSTRTVGDVMIPDVITVPSGSLLSEAARLMVDNDISRLP 228
Query: 213 VVD 215
VVD
Sbjct: 229 VVD 231
>gi|294496296|ref|YP_003542789.1| XRE family transcriptional regulator [Methanohalophilus mahii DSM
5219]
gi|292667295|gb|ADE37144.1| putative transcriptional regulator, XRE family [Methanohalophilus
mahii DSM 5219]
Length = 154
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 60/122 (49%), Gaps = 5/122 (4%)
Query: 100 PTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRA-DNSMFPEVD 158
P V +A L + I+G PV+D+ +VG++S+ DLLAL I G S F ++
Sbjct: 16 PEDKVSDAARSLKDNDISGMPVVDNG-NIVGILSEVDLLALLEIPEHGDFWLPSPFEVIE 74
Query: 159 STWKTF---NEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVD 215
+ F + +K+LS V +M V ++EDA+ L+ K RLPVV+
Sbjct: 75 IPIREFISWEDTKKMLSDVGSMPVSKIMRYGVFTVSPEDSIEDASHLMSRHKINRLPVVE 134
Query: 216 AD 217
D
Sbjct: 135 ND 136
>gi|455650952|gb|EMF29706.1| transport protein [Streptomyces gancidicus BKS 13-15]
Length = 224
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 66/136 (48%), Gaps = 20/136 (14%)
Query: 84 TVGDFMTTKEELHVVKPTTTV--DEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL--A 139
TV + MT VVK + E + +L E +T PV+DD + +G+VS+ DLL +
Sbjct: 5 TVAELMTRD----VVKARRDLPFKEIVRLLAENDVTAVPVVDDLGRPMGVVSEADLLRKS 60
Query: 140 LDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDA 199
D SGR P +++ W+ +K G +LM+ V R ++ +A
Sbjct: 61 SDQADPSGRVP---VPHLEA-WER--------AKAEGSRAEELMSAPAVCARPEWSVVEA 108
Query: 200 ARLLLETKYRRLPVVD 215
ARL+ +RLPVVD
Sbjct: 109 ARLMEAQHVKRLPVVD 124
>gi|423343079|ref|ZP_17320793.1| inosine-5'-monophosphate dehydrogenase [Parabacteroides johnsonii
CL02T12C29]
gi|409216755|gb|EKN09738.1| inosine-5'-monophosphate dehydrogenase [Parabacteroides johnsonii
CL02T12C29]
Length = 491
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 57/114 (50%), Gaps = 31/114 (27%)
Query: 103 TVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWK 162
TV +AL ++ E +I G PV+D+ LVG+V++ DL R + M VD
Sbjct: 109 TVGDALGMMKEYKIGGIPVVDESDHLVGIVTNRDL----------RFERDMNRSVD---- 154
Query: 163 TFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDA 216
++++K N +V ++T+LE AA +L + K +LPVVD+
Sbjct: 155 ------EVMTKEN-----------LIVADQSTDLEAAASILQQHKIEKLPVVDS 191
Score = 37.4 bits (85), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL 137
D + TKE L V +T ++ A IL + +I PV+D +LVGL++ D+
Sbjct: 154 DEVMTKENLIVADQSTDLEAAASILQQHKIEKLPVVDSQNRLVGLITYKDI 204
>gi|386714143|ref|YP_006180466.1| hypothetical protein HBHAL_2844 [Halobacillus halophilus DSM 2266]
gi|384073699|emb|CCG45192.1| hypothetical protein HBHAL_2844 [Halobacillus halophilus DSM 2266]
Length = 142
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 68/132 (51%), Gaps = 29/132 (21%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TV D MT+ ++ V + T+ A +I+ +K + PV D+ +L+G+V+D DL+
Sbjct: 3 TVKDIMTS--DVSVCRTDDTLSSAAQIMKQKNVGAVPVCDNQGQLMGMVTDRDLVL---- 56
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
G AD PE +Q+++S L +P ETT LE+A++++
Sbjct: 57 --RGYADKK--PET-------TPIQQVMSDR-------LYNCSP----ETT-LEEASKIM 93
Query: 204 LETKYRRLPVVD 215
E + RRLPVV+
Sbjct: 94 AEHQIRRLPVVE 105
>gi|291440953|ref|ZP_06580343.1| CBS domain-containing protein [Streptomyces ghanaensis ATCC 14672]
gi|291343848|gb|EFE70804.1| CBS domain-containing protein [Streptomyces ghanaensis ATCC 14672]
Length = 219
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 61/136 (44%), Gaps = 13/136 (9%)
Query: 83 YTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS 142
+ V D MT + V T E + ++ + ++ PV++D ++VG+VS+ DLL +
Sbjct: 3 HIVRDVMT--RSVVSVGRQTPFKEIVRLMRGRGVSALPVLEDGDRVVGVVSEADLLPKEE 60
Query: 143 ISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARL 202
F + D +T L K +LMT V VR L DAA L
Sbjct: 61 -----------FRDSDPDRRTQRRRLPDLLKAGALTAEELMTSPAVTVRAGVTLSDAAGL 109
Query: 203 LLETKYRRLPVVDADG 218
+ + +RLPVVD G
Sbjct: 110 MTRHRVKRLPVVDGRG 125
>gi|397618554|gb|EJK64944.1| hypothetical protein THAOC_14262, partial [Thalassiosira oceanica]
Length = 277
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 66/137 (48%), Gaps = 23/137 (16%)
Query: 89 MTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDD---------DWKLVGLVSDYDLLA 139
+ T L + P T VDEA+ LV I+ PV++ +LVG VS +D L
Sbjct: 123 LETVPHLFTLSPDTKVDEAISQLVSYSISSAPVVERLKDAETNQVFARLVGFVSSFDFLP 182
Query: 140 LDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDA 199
+ +GS + + +T ++V + + G+ V D+MT P+ V N+++A
Sbjct: 183 REE-TGS----------LVTLGETKDDVAR---RILGRTVEDVMTRDPISVTTNQNMKEA 228
Query: 200 ARLLLETKYRRLPVVDA 216
A ++ + LPVVDA
Sbjct: 229 AEVMAGHRLHALPVVDA 245
>gi|320159747|ref|YP_004172971.1| hypothetical protein ANT_03370 [Anaerolinea thermophila UNI-1]
gi|319993600|dbj|BAJ62371.1| hypothetical protein ANT_03370 [Anaerolinea thermophila UNI-1]
Length = 427
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 67/126 (53%), Gaps = 8/126 (6%)
Query: 91 TKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRAD 150
T++ +H++ P V +A + ++E + PV+D + ++VG+++ DLL G R
Sbjct: 128 TRDVVHLM-PEMNVRQAWQKMLESGVKAMPVVDSERRVVGILTSEDLLE----RGVIRQR 182
Query: 151 NSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRR 210
S+ +D E +LLS + V D+MT + RE +L +A R +++ +R
Sbjct: 183 LSVAVRLDEA--EIQEELRLLS-ASPLTVKDVMTQPVITAREDEHLGNAVRRMIDKGLKR 239
Query: 211 LPVVDA 216
+PVV+A
Sbjct: 240 MPVVNA 245
>gi|410464699|ref|ZP_11318104.1| hypothetical protein B193_2630 [Desulfovibrio magneticus str.
Maddingley MBC34]
gi|409982185|gb|EKO38669.1| hypothetical protein B193_2630 [Desulfovibrio magneticus str.
Maddingley MBC34]
Length = 413
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 62/121 (51%), Gaps = 9/121 (7%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P T + E +E+L+ + + PV+D K+VG+V+ DLL +S A S+F +
Sbjct: 123 VGPDTDLAEVVELLLSRHVKAVPVVDGGRKVVGVVTGGDLLTRGGLS----ARLSLFGLL 178
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
+ + + +G V ++MT + E T+L +A+ +++ +RLPVVD
Sbjct: 179 PADAREEAA-----AALSGHTVTEVMTSPAETIGERTSLREASERMVKRGLKRLPVVDEA 233
Query: 218 G 218
G
Sbjct: 234 G 234
Score = 37.7 bits (86), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 63/136 (46%), Gaps = 18/136 (13%)
Query: 83 YTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS 142
+TV + MT+ E + T++ EA E +V++ + PV+D+ +L+G+VS D+L
Sbjct: 193 HTVTEVMTSPAE--TIGERTSLREASERMVKRGLKRLPVVDEAGELIGIVSRTDIL---- 246
Query: 143 ISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARL 202
RA + F L+ + ++ D+ T P +L D A
Sbjct: 247 -----RAAAKVPAGATEAMPRFT--AGLMQQARDVLITDVPTARP-----DESLLDVAAR 294
Query: 203 LLETKYRRLPVVDADG 218
L+ + RR+ V+DA G
Sbjct: 295 LVASPLRRVVVLDAAG 310
>gi|315655909|ref|ZP_07908807.1| CBS domain protein/ACT domain-containing protein [Mobiluncus
curtisii ATCC 51333]
gi|315489973|gb|EFU79600.1| CBS domain protein/ACT domain-containing protein [Mobiluncus
curtisii ATCC 51333]
Length = 212
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 55/113 (48%), Gaps = 18/113 (15%)
Query: 103 TVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWK 162
TV +A+E++ IT PV+ D KL G+VS DL N P D+T
Sbjct: 19 TVPDAIELMQAHGITKLPVLHD-GKLCGVVSQLDL-------------NRALPS-DATSL 63
Query: 163 TFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVD 215
+F EV LLSK + +M P + LE+AA L+ +TK LPV+D
Sbjct: 64 SFGEVAYLLSKLK---IYKIMQKNPPTIAPDAMLEEAAILMRDTKVEILPVLD 113
>gi|15900649|ref|NP_345253.1| acetoin utilization protein AcuB [Streptococcus pneumoniae TIGR4]
gi|111658354|ref|ZP_01409042.1| hypothetical protein SpneT_02000494 [Streptococcus pneumoniae
TIGR4]
gi|14972229|gb|AAK74893.1| putative acetoin utilization protein AcuB [Streptococcus pneumoniae
TIGR4]
Length = 218
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 67/131 (51%), Gaps = 20/131 (15%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT K + + P TV A +++ E+ + PVI++D +LVGLV++ +
Sbjct: 3 VKDFMTRK--VVYISPDITVSHAADLMREQGLHRLPVIEND-QLVGLVTEGTI------- 52
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+A S +T + E+ LL+KT V D+M V V +LEDA L+L
Sbjct: 53 --AQASPS-----KATSLSIYEMNYLLNKTK---VKDVMIRDVVTVSGYASLEDATYLML 102
Query: 205 ETKYRRLPVVD 215
+ K LPVVD
Sbjct: 103 KNKISILPVVD 113
>gi|149392803|gb|ABR26204.1| cbs domain protein [Oryza sativa Indica Group]
Length = 143
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 138
VGD MT + +L VKP T V +A++++ EKRI PVID +VG+VS D++
Sbjct: 69 VGDIMTEENQLITVKPDTRVLQAMQLMTEKRIRHIPVIDGT-GMVGMVSIGDIV 121
>gi|269120169|ref|YP_003308346.1| inosine-5'-monophosphate dehydrogenase [Sebaldella termitidis ATCC
33386]
gi|268614047|gb|ACZ08415.1| inosine-5'-monophosphate dehydrogenase [Sebaldella termitidis ATCC
33386]
Length = 486
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 56/112 (50%), Gaps = 31/112 (27%)
Query: 103 TVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWK 162
T+ EA E+L +I+G PVI+ D L+G++++ DL D D T K
Sbjct: 105 TLREANELLKHYKISGLPVIEKDGSLIGIITNRDLKYRD----------------DLTIK 148
Query: 163 TFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVV 214
V+ +++K N + APV T LE+A ++LLE + +LP+V
Sbjct: 149 ----VKDIMTKEN-------LVTAPV----GTTLEEAKQILLEHRIEKLPIV 185
>gi|218262310|ref|ZP_03476824.1| hypothetical protein PRABACTJOHN_02498 [Parabacteroides johnsonii
DSM 18315]
gi|218223461|gb|EEC96111.1| hypothetical protein PRABACTJOHN_02498 [Parabacteroides johnsonii
DSM 18315]
Length = 491
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 57/114 (50%), Gaps = 31/114 (27%)
Query: 103 TVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWK 162
TV +AL ++ E +I G PV+D+ LVG+V++ DL R + M VD
Sbjct: 109 TVGDALGMMKEYKIGGIPVVDESDHLVGIVTNRDL----------RFERDMNRSVD---- 154
Query: 163 TFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDA 216
++++K N +V ++T+LE AA +L + K +LPVVD+
Sbjct: 155 ------EVMTKEN-----------LIVADQSTDLEAAASILQQHKIEKLPVVDS 191
Score = 37.7 bits (86), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL 137
D + TKE L V +T ++ A IL + +I PV+D +LVGL++ D+
Sbjct: 154 DEVMTKENLIVADQSTDLEAAASILQQHKIEKLPVVDSQKRLVGLITYKDI 204
>gi|94536617|ref|NP_001035456.1| AMP-activated protein kinase, non-catalytic gamma-3 subunit [Danio
rerio]
gi|92096847|gb|AAI15292.1| Zgc:136850 [Danio rerio]
Length = 336
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 48/104 (46%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
VK T TV +AL I VE+R++ PV+++ K+V L S +D++ L + + +M +
Sbjct: 209 VKETETVYDALTIFVERRVSALPVVNEQGKVVALYSRFDVINLAAQKTYNHLNMTMAEAI 268
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAAR 201
W V K + V D + A V + ED R
Sbjct: 269 QGRWCCIEGVLKCYPHETLETVIDRIAEAEVHRLVLVDTEDVVR 312
>gi|15644106|ref|NP_229155.1| inosine-5-monophosphate dehydrogenase-related protein [Thermotoga
maritima MSB8]
gi|148270558|ref|YP_001245018.1| putative anti-sigma regulatory factor, serine/threonine protein
kinase [Thermotoga petrophila RKU-1]
gi|170289264|ref|YP_001739502.1| putative anti-sigma regulatory factor, serine/threonine protein
kinase [Thermotoga sp. RQ2]
gi|418045411|ref|ZP_12683506.1| putative anti-sigma regulatory factor, serine/threonine protein
kinase [Thermotoga maritima MSB8]
gi|4981914|gb|AAD36425.1|AE001789_10 inosine-5-monophosphate dehydrogenase-related protein [Thermotoga
maritima MSB8]
gi|147736102|gb|ABQ47442.1| putative anti-sigma regulatory factor, serine/threonine protein
kinase [Thermotoga petrophila RKU-1]
gi|170176767|gb|ACB09819.1| putative anti-sigma regulatory factor, serine/threonine protein
kinase [Thermotoga sp. RQ2]
gi|351676296|gb|EHA59449.1| putative anti-sigma regulatory factor, serine/threonine protein
kinase [Thermotoga maritima MSB8]
Length = 321
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 55/121 (45%), Gaps = 29/121 (23%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P T+ EI+ KRI+G PV+DD ++VG+VS D++ ++ GS D+
Sbjct: 29 VTPDKTLLHVKEIMRIKRISGVPVVDDKKRVVGIVSLEDIIK--ALEGSYIKDS------ 80
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
V MT V ++ET L+DA + + Y R PVVD +
Sbjct: 81 ---------------------VEKRMTKNVVCLKETDTLQDAVKTFEKYGYGRFPVVDDE 119
Query: 218 G 218
G
Sbjct: 120 G 120
>gi|242279278|ref|YP_002991407.1| hypothetical protein Desal_1806 [Desulfovibrio salexigens DSM 2638]
gi|242122172|gb|ACS79868.1| CBS domain containing membrane protein [Desulfovibrio salexigens
DSM 2638]
Length = 145
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 65/131 (49%), Gaps = 19/131 (14%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D MTT EL + + + A ++ +RI P+++D+ + +GLV+ D+L +IS
Sbjct: 4 VNDLMTT--ELFTLSESDNLKMARSLMDLQRIRHIPIVNDEREFIGLVTHRDILRA-TIS 60
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
D + E+DS G VG++M + E T+L++AA LLL
Sbjct: 61 QLADIDPATQGEIDS----------------GIPVGEIMRTDIKTISEDTSLKEAAVLLL 104
Query: 205 ETKYRRLPVVD 215
+ KY PVV+
Sbjct: 105 DHKYGCFPVVN 115
>gi|294101728|ref|YP_003553586.1| hypothetical protein [Aminobacterium colombiense DSM 12261]
gi|293616708|gb|ADE56862.1| CBS domain containing membrane protein [Aminobacterium colombiense
DSM 12261]
Length = 150
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 65/136 (47%), Gaps = 11/136 (8%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL--ALDS 142
+GD M +L V T + EA+E+L + +TG PV+D+ LVG +S+ D++ +L S
Sbjct: 3 IGDLMD--RDLTSVTENTPLKEAIEMLSQHNLTGLPVVDEMGFLVGFISEKDIIKASLPS 60
Query: 143 ISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARL 202
+ P+ F+++ + L K + VG MT + E + AA
Sbjct: 61 YCEYLEKGAAFIPD-------FDQLSEKLRKKGMEPVGKYMTRKVIYFSEEDSDLHAALS 113
Query: 203 LLETKYRRLPVVDADG 218
L++ + PVV DG
Sbjct: 114 LIQQGLKMAPVVREDG 129
>gi|323136204|ref|ZP_08071286.1| CBS domain containing membrane protein [Methylocystis sp. ATCC
49242]
gi|322398278|gb|EFY00798.1| CBS domain containing membrane protein [Methylocystis sp. ATCC
49242]
Length = 313
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 64/133 (48%), Gaps = 12/133 (9%)
Query: 89 MTTKEELHVVKPTTTVDEALE----ILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
M ++ ++ P TVD L+ +L E + PV+D+ +G+V+ +L + I
Sbjct: 1 MIARDLMNSDFPFVTVDADLDYVAKLLAECGLGAVPVVDERRAPIGIVTRSNLE--EKIQ 58
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
G AD PE ++ + NG+ + D+MT + V ET L D AR++
Sbjct: 59 APG-ADLGEIPEFLLR-----NRRRPPLRANGRALRDVMTTPAISVPETAALADIARMME 112
Query: 205 ETKYRRLPVVDAD 217
K +R+PVVD D
Sbjct: 113 SCKLKRIPVVDGD 125
>gi|448366570|ref|ZP_21554693.1| peptidase M50 [Natrialba aegyptia DSM 13077]
gi|445654025|gb|ELZ06881.1| peptidase M50 [Natrialba aegyptia DSM 13077]
Length = 420
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 35/57 (61%), Gaps = 4/57 (7%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVID----DDWKLVGLVSDYD 136
TV D MT LH V P T+V E ++ + +R TG+PVID D+ +LVGLV+ D
Sbjct: 250 TVADIMTPAGNLHTVSPETSVAELVQRMFSERHTGYPVIDTSGFDNGRLVGLVTLSD 306
>gi|219853206|ref|YP_002467638.1| signal transduction protein with CBS domains [Methanosphaerula
palustris E1-9c]
gi|219547465|gb|ACL17915.1| putative signal transduction protein with CBS domains
[Methanosphaerula palustris E1-9c]
Length = 161
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 69/138 (50%), Gaps = 12/138 (8%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V + MTT V++ V EA + EK + G PV+D +LVG+V+D DLL+L +
Sbjct: 3 VSEIMTTNP--LVIQADAMVSEAARTMREKHVGGLPVLDGT-RLVGMVTDSDLLSL--LK 57
Query: 145 GSGRADNSMFPE----VDSTWKTFNEVQKL---LSKTNGKMVGDLMTPAPVVVRETTNLE 197
+D+ P ++ + F +K L +G V ++M+ + + + +
Sbjct: 58 TGDLSDDLWLPSPLEIIEVPIREFINWEKTRGALRDISGMKVREVMSVPAITIDQEAEIS 117
Query: 198 DAARLLLETKYRRLPVVD 215
+AA ++L K RLPV+D
Sbjct: 118 EAAAVMLREKIVRLPVMD 135
>gi|306825600|ref|ZP_07458939.1| CBS domain protein [Streptococcus sp. oral taxon 071 str. 73H25AP]
gi|417793919|ref|ZP_12441185.1| CBS domain protein [Streptococcus oralis SK255]
gi|304431961|gb|EFM34938.1| CBS domain protein [Streptococcus sp. oral taxon 071 str. 73H25AP]
gi|334271639|gb|EGL90024.1| CBS domain protein [Streptococcus oralis SK255]
Length = 218
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 69/131 (52%), Gaps = 20/131 (15%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT K + + P TTV A +++ E+ + PVI++D +LVGLV++ +I+
Sbjct: 3 VKDFMTRK--VVYISPDTTVAHAADLMREQGLHRLPVIEND-QLVGLVTE------GTIA 53
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+ + +T + E+ LL+KT V D+M V V +LEDA L+L
Sbjct: 54 EASPSK--------ATSLSIYEMNYLLNKTK---VKDVMIRDVVTVSGYASLEDATYLML 102
Query: 205 ETKYRRLPVVD 215
+ K LPVVD
Sbjct: 103 KNKIGILPVVD 113
>gi|401684690|ref|ZP_10816566.1| CBS domain protein [Streptococcus sp. BS35b]
gi|414158169|ref|ZP_11414463.1| hypothetical protein HMPREF9188_00737 [Streptococcus sp. F0441]
gi|400184960|gb|EJO19196.1| CBS domain protein [Streptococcus sp. BS35b]
gi|410870714|gb|EKS18671.1| hypothetical protein HMPREF9188_00737 [Streptococcus sp. F0441]
Length = 218
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 69/131 (52%), Gaps = 20/131 (15%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT K + + P TTV A +++ E+ + PVI++D +LVGLV++ +I+
Sbjct: 3 VKDFMTRK--VVYISPDTTVAHAADLMREQGLHRLPVIEND-QLVGLVTE------GTIA 53
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+ + +T + E+ LL+KT V D+M V V +LEDA L+L
Sbjct: 54 EASPSK--------ATSLSIYEMNYLLNKTK---VKDVMIRDVVTVSGYASLEDATYLML 102
Query: 205 ETKYRRLPVVD 215
+ K LPVVD
Sbjct: 103 KNKIGILPVVD 113
>gi|383764076|ref|YP_005443058.1| hypothetical protein CLDAP_31210 [Caldilinea aerophila DSM 14535 =
NBRC 104270]
gi|381384344|dbj|BAM01161.1| hypothetical protein CLDAP_31210 [Caldilinea aerophila DSM 14535 =
NBRC 104270]
Length = 429
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 69/133 (51%), Gaps = 11/133 (8%)
Query: 88 FMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSG 147
M +E+ V +V E +++L+++ + PV+D++ +LVG+++D DLL ++
Sbjct: 123 IMRELDEVASVTTDASVAEVVKLLLDRGVRSLPVVDEERRLVGIITDGDLLRRAGLTARI 182
Query: 148 RADNSMFPEVDSTWKTFNEVQKLLS--KTNGKMVGDLMTPAPVVVRETTNLEDAARLLLE 205
M P+ +++ LL+ + + G++MT + VR + AA +++
Sbjct: 183 ALHKEM-PD--------DQIHALLTTLRRSPLTAGEMMTAPVISVRTDETVRTAAARMVK 233
Query: 206 TKYRRLPVVDADG 218
+RLPVV+ +G
Sbjct: 234 HNLKRLPVVNEEG 246
Score = 38.5 bits (88), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 58/124 (46%), Gaps = 11/124 (8%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P T++E + L R V+D + ++G+++D DLL R+ P +
Sbjct: 292 VGPDATLEEIVRALEASRRRRVVVVDSERHVLGMITDGDLLR--------RSQQRQHPGL 343
Query: 158 DSTWKTFNEVQKLLSK---TNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVV 214
+ + + + + G+ DLM+ + +R +L +A RL+ +RLPVV
Sbjct: 344 LERLRRLVVGEPAIDQVLPSAGERAADLMSAPVITIRPDASLGEALRLMTTHAVKRLPVV 403
Query: 215 DADG 218
DA+G
Sbjct: 404 DAEG 407
>gi|374317064|ref|YP_005063492.1| hypothetical protein [Sphaerochaeta pleomorpha str. Grapes]
gi|359352708|gb|AEV30482.1| CBS-domain-containing membrane protein [Sphaerochaeta pleomorpha
str. Grapes]
Length = 214
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 62/120 (51%), Gaps = 17/120 (14%)
Query: 100 PTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDS 159
P +V EA ++ +++ PV+D D KLVG++++ D+L A S +
Sbjct: 16 PDMSVAEASALMKREKVHRLPVLDKDKKLVGIITEKDIL---------YASPS-----PA 61
Query: 160 TWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGW 219
T + +E+ LLSK V LM+ V + + T +E+AAR++++ LPV++ D
Sbjct: 62 TSLSIHEMAYLLSKLT---VKKLMSKNVVTITKDTTVEEAARMMVDQDLSCLPVMEGDSL 118
>gi|225012062|ref|ZP_03702499.1| putative signal transduction protein with CBS domains
[Flavobacteria bacterium MS024-2A]
gi|225003617|gb|EEG41590.1| putative signal transduction protein with CBS domains
[Flavobacteria bacterium MS024-2A]
Length = 154
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 63/134 (47%), Gaps = 25/134 (18%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TV D MT +L V KP T+ +E ++ RI+G PV++++ LVG++S+ D + I
Sbjct: 22 TVSDIMT--HQLIVFKPEDTIHVVMEAFIKNRISGGPVVNEEGDLVGVISEAD--CMKEI 77
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
S S + FN +L K+ V MT + ++ DAA L
Sbjct: 78 SDS---------------RYFN--MPILDKS----VSYFMTKKVDTIESNMSVFDAAALF 116
Query: 204 LETKYRRLPVVDAD 217
++ RR PV+ +
Sbjct: 117 SKSSRRRYPVMKGN 130
>gi|448323223|ref|ZP_21512687.1| peptidase M50 [Natronococcus amylolyticus DSM 10524]
gi|445600409|gb|ELY54422.1| peptidase M50 [Natronococcus amylolyticus DSM 10524]
Length = 401
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLAL 140
TV D MT +EL V P TT+ E L+ ++E R TGFPV+++D + G+V+ D+ A+
Sbjct: 250 TVADVMTPVDELDTVSPETTIAELLDAMMEHRHTGFPVVEND-SIAGVVTLEDVRAV 305
>gi|297564600|ref|YP_003683572.1| hypothetical protein [Meiothermus silvanus DSM 9946]
gi|296849049|gb|ADH62064.1| CBS domain containing protein [Meiothermus silvanus DSM 9946]
Length = 181
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 66/140 (47%), Gaps = 16/140 (11%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V + M T+ + V+ T+ A + ++E R+ G PV+++ KLVGL+ DLL
Sbjct: 21 VKELMKTRP--YSVRLDETLLVAAQRMLEHRLGGLPVVNEAGKLVGLIEVDDLLP----- 73
Query: 145 GSGRADNSMFPEVDS-----TWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDA 199
R +N F EV++ W V+ + + K V M VV LE A
Sbjct: 74 ---RPENVPFSEVEALRLFDEWVDPGSVESVYRQYQSKPVAAAMRTELAVVSPEDPLETA 130
Query: 200 -ARLLLETKYRRLPVVDADG 218
R++ + +YRR+ VVD G
Sbjct: 131 LVRMMQDRQYRRVLVVDEQG 150
>gi|448462810|ref|ZP_21597869.1| peptidase M50 [Halorubrum kocurii JCM 14978]
gi|445818031|gb|EMA67899.1| peptidase M50 [Halorubrum kocurii JCM 14978]
Length = 394
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 60/134 (44%), Gaps = 30/134 (22%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TV D MT +EELH V T+V + + + E+R TG+PV+ D LVG+V+ D
Sbjct: 249 TVADVMTRREELHTVSGGTSVADLMNRMFEERHTGYPVLHGD-DLVGMVTLEDA------ 301
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
++ EV++ + V D+M V V T+ A + +
Sbjct: 302 ------------------RSVREVER-----DAYQVADVMETDLVGVGPETDAMTALQTM 338
Query: 204 LETKYRRLPVVDAD 217
E RLPVVD D
Sbjct: 339 QENGVGRLPVVDRD 352
Score = 36.6 bits (83), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Query: 83 YTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS 142
Y V D M T +L V P T AL+ + E + PV+D D +LVGL+S DL+ +
Sbjct: 312 YQVADVMET--DLVGVGPETDAMTALQTMQENGVGRLPVVDRDNELVGLISRSDLMTAFN 369
Query: 143 ISGSG 147
I +G
Sbjct: 370 IIQTG 374
>gi|421487791|ref|ZP_15935189.1| CBS domain protein [Streptococcus oralis SK304]
gi|400369753|gb|EJP22750.1| CBS domain protein [Streptococcus oralis SK304]
Length = 218
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 69/131 (52%), Gaps = 20/131 (15%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT K + + P TTV A +++ E+ + PVI++D +LVGLV++ +I+
Sbjct: 3 VKDFMTRK--VVYISPDTTVAHAADLMREQGLHRLPVIEND-QLVGLVTE------GTIA 53
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+ + +T + E+ LL+KT V D+M V V +LEDA L+L
Sbjct: 54 EASPSK--------ATSLSIYEMNYLLNKTK---VKDVMIRDVVTVSGYASLEDATYLML 102
Query: 205 ETKYRRLPVVD 215
+ K LPVVD
Sbjct: 103 KNKIGILPVVD 113
>gi|149392473|gb|ABR26039.1| cbs domain protein [Oryza sativa Indica Group]
Length = 141
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 138
VGD MT + +L VKP T V +A++++ EKRI PVID +VG+VS D++
Sbjct: 67 VGDIMTEENQLITVKPDTRVLQAMQLMTEKRIRHIPVIDGT-GMVGMVSIGDIV 119
>gi|406587899|ref|ZP_11062687.1| CBS domain containing protein [Streptococcus sp. GMD1S]
gi|419814434|ref|ZP_14339222.1| CBS domain containing protein [Streptococcus sp. GMD2S]
gi|419817364|ref|ZP_14341528.1| CBS domain containing protein [Streptococcus sp. GMD4S]
gi|404466088|gb|EKA11447.1| CBS domain containing protein [Streptococcus sp. GMD4S]
gi|404471585|gb|EKA16092.1| CBS domain containing protein [Streptococcus sp. GMD1S]
gi|404471829|gb|EKA16300.1| CBS domain containing protein [Streptococcus sp. GMD2S]
Length = 218
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 69/131 (52%), Gaps = 20/131 (15%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT K + + P TTV A +++ E+ + PVI++D +LVGLV++ +I+
Sbjct: 3 VKDFMTRK--VVYISPDTTVAHAADLMREQGLHRLPVIEND-QLVGLVTE------GTIA 53
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+ + +T + E+ LL+KT V D+M V V +LEDA L+L
Sbjct: 54 EASPSK--------ATSLSIYEMNYLLNKTK---VKDVMIRDVVTVSGYASLEDATYLML 102
Query: 205 ETKYRRLPVVD 215
+ K LPVVD
Sbjct: 103 KNKIGILPVVD 113
>gi|293365064|ref|ZP_06611781.1| CBS domain protein [Streptococcus oralis ATCC 35037]
gi|307702227|ref|ZP_07639187.1| acetoin utilization protein acuB [Streptococcus oralis ATCC 35037]
gi|331266737|ref|YP_004326367.1| CBS domain containing protein [Streptococcus oralis Uo5]
gi|406576988|ref|ZP_11052609.1| CBS domain containing protein [Streptococcus sp. GMD6S]
gi|417940436|ref|ZP_12583724.1| CBS domain protein [Streptococcus oralis SK313]
gi|291316514|gb|EFE56950.1| CBS domain protein [Streptococcus oralis ATCC 35037]
gi|307624240|gb|EFO03217.1| acetoin utilization protein acuB [Streptococcus oralis ATCC 35037]
gi|326683409|emb|CBZ01027.1| CBS domain containing protein; involved in acetoin metabolism,
putative [Streptococcus oralis Uo5]
gi|343389317|gb|EGV01902.1| CBS domain protein [Streptococcus oralis SK313]
gi|404460452|gb|EKA06715.1| CBS domain containing protein [Streptococcus sp. GMD6S]
Length = 218
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 69/131 (52%), Gaps = 20/131 (15%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT K + + P TTV A +++ E+ + PVI++D +LVGLV++ +I+
Sbjct: 3 VKDFMTRK--VVYISPDTTVAHAADLMREQGLHRLPVIEND-QLVGLVTE------GTIA 53
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+ + +T + E+ LL+KT V D+M V V +LEDA L+L
Sbjct: 54 EASPSK--------ATSLSIYEMNYLLNKTK---VKDVMIRDVVTVSGYASLEDATYLML 102
Query: 205 ETKYRRLPVVD 215
+ K LPVVD
Sbjct: 103 KNKIGILPVVD 113
>gi|452992027|emb|CCQ96570.1| inosine-monophosphate dehydrogenase [Clostridium ultunense Esp]
Length = 486
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 58/119 (48%), Gaps = 31/119 (26%)
Query: 100 PTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDS 159
P V +A E++ + RI+G P++D+ KLVG++++ DL + S P
Sbjct: 104 PDHKVYDAEELMAKYRISGVPIVDEHHKLVGILTNRDLRFIHDYS---------IP---- 150
Query: 160 TWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADG 218
+Q++++K N + APV T L++A ++L K +LP+VD G
Sbjct: 151 -------IQEVMTKEN-------LITAPV----GTTLKEAEKILQRHKIEKLPLVDEHG 191
>gi|419783317|ref|ZP_14309108.1| CBS domain protein [Streptococcus oralis SK610]
gi|383182471|gb|EIC75026.1| CBS domain protein [Streptococcus oralis SK610]
Length = 218
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 69/131 (52%), Gaps = 20/131 (15%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT K + + P TTV A +++ E+ + PVI++D +LVGLV++ +I+
Sbjct: 3 VKDFMTRK--VVYISPDTTVAHAADLMREQGLHRLPVIEND-QLVGLVTE------GTIA 53
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+ + +T + E+ LL+KT V D+M V V +LEDA L+L
Sbjct: 54 EASPSK--------ATSLSIYEMNYLLNKTK---VKDVMIRDVVTVSGYASLEDATYLML 102
Query: 205 ETKYRRLPVVD 215
+ K LPVVD
Sbjct: 103 KNKIGILPVVD 113
>gi|351708191|gb|EHB11110.1| 5'-AMP-activated protein kinase subunit gamma-2 [Heterocephalus
glaber]
Length = 267
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 62/129 (48%), Gaps = 7/129 (5%)
Query: 44 RVFSVLATSSDRVSAL---RRSSAVFASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKP 100
+ F L + R + L ++ S +FAS SA + +G + T E + + P
Sbjct: 83 KAFFALVANGVRAAPLWESKKQSLLFASDM--PKSAFMKQNLQELG--IGTYENIAFIPP 138
Query: 101 TTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDST 160
T + +AL I VE++I+ P +D+ K+V + S +D++ L + D ++ + +
Sbjct: 139 DTPIIKALNIFVERQISALPAVDERGKVVDIYSKFDVINLAAEKTYNNLDITVTQALQHS 198
Query: 161 WKTFNEVQK 169
W+ F V K
Sbjct: 199 WQYFEGVVK 207
>gi|340618018|ref|YP_004736471.1| hypothetical protein zobellia_2032 [Zobellia galactanivorans]
gi|339732815|emb|CAZ96148.1| CBS domain protein [Zobellia galactanivorans]
Length = 155
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 62/130 (47%), Gaps = 25/130 (19%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D+MT K L KP ++ E +E+ + I+G PV+DD+ LVG++S+ D + IS
Sbjct: 25 VSDYMTKK--LVTFKPDQSILEVMELFTKHNISGGPVMDDNGFLVGIISEAD--CMKQIS 80
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
S + FN Q +L K+ V MT + ++ DAA +
Sbjct: 81 ES---------------RYFN--QPILDKS----VEKFMTKEVETIPHDISIFDAASIFD 119
Query: 205 ETKYRRLPVV 214
+ RRLPV+
Sbjct: 120 KHNRRRLPVM 129
>gi|270292339|ref|ZP_06198550.1| CBS domain protein [Streptococcus sp. M143]
gi|270278318|gb|EFA24164.1| CBS domain protein [Streptococcus sp. M143]
Length = 218
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 69/131 (52%), Gaps = 20/131 (15%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT K + + P TTV A +++ E+ + PVI++D +LVGLV++ +I+
Sbjct: 3 VKDFMTRK--VVYISPDTTVAHAADLMREQGLHRLPVIEND-QLVGLVTE------GTIA 53
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+ + +T + E+ LL+KT V D+M + V +LEDA L+L
Sbjct: 54 EASPSK--------ATSLSIYEMNYLLNKTK---VKDVMIRDVITVSGYASLEDATYLML 102
Query: 205 ETKYRRLPVVD 215
+ K LPVVD
Sbjct: 103 KNKIGILPVVD 113
>gi|418975063|ref|ZP_13522972.1| CBS domain protein [Streptococcus oralis SK1074]
gi|383348434|gb|EID26393.1| CBS domain protein [Streptococcus oralis SK1074]
Length = 218
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 69/131 (52%), Gaps = 20/131 (15%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT K + + P TTV A +++ E+ + PVI++D +LVGLV++ +I+
Sbjct: 3 VKDFMTRK--VVYISPDTTVAHAADLMREQGLHRLPVIEND-QLVGLVTE------GTIA 53
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+ + +T + E+ LL+KT V D+M V V +LEDA L+L
Sbjct: 54 EASPSK--------ATSLSIYEMNYLLNKTK---VKDVMIRDVVTVSGYASLEDATYLML 102
Query: 205 ETKYRRLPVVD 215
+ K LPVVD
Sbjct: 103 KNKIGILPVVD 113
>gi|306829185|ref|ZP_07462375.1| CBS domain protein [Streptococcus mitis ATCC 6249]
gi|304428271|gb|EFM31361.1| CBS domain protein [Streptococcus mitis ATCC 6249]
Length = 218
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 69/131 (52%), Gaps = 20/131 (15%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT K + + P TTV A +++ E+ + PVI++D +LVGLV++ +I+
Sbjct: 3 VKDFMTRK--VVYISPDTTVAHAADLMREQGLHRLPVIEND-QLVGLVTE------GTIA 53
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+ + +T + E+ LL+KT V D+M V V +LEDA L+L
Sbjct: 54 EASPSK--------ATSLSIYEMNYLLNKTK---VKDVMIRDVVTVSGYASLEDATYLML 102
Query: 205 ETKYRRLPVVD 215
+ K LPVVD
Sbjct: 103 KNKIGILPVVD 113
>gi|358465476|ref|ZP_09175422.1| CBS domain protein [Streptococcus sp. oral taxon 058 str. F0407]
gi|417916368|ref|ZP_12559950.1| CBS domain protein [Streptococcus mitis bv. 2 str. SK95]
gi|342829810|gb|EGU64152.1| CBS domain protein [Streptococcus mitis bv. 2 str. SK95]
gi|357065597|gb|EHI75784.1| CBS domain protein [Streptococcus sp. oral taxon 058 str. F0407]
Length = 218
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 69/131 (52%), Gaps = 20/131 (15%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT K + + P TTV A +++ E+ + PVI++D +LVGLV++ +I+
Sbjct: 3 VKDFMTRK--VVYISPDTTVAHAADLMREQGLHRLPVIEND-QLVGLVTE------GTIA 53
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+ + +T + E+ LL+KT V D+M + V +LEDA L+L
Sbjct: 54 EASPSK--------ATSLSIYEMNYLLNKTK---VKDVMIRDVITVSGYASLEDATYLML 102
Query: 205 ETKYRRLPVVD 215
+ K LPVVD
Sbjct: 103 KNKIGILPVVD 113
>gi|330835171|ref|YP_004409899.1| signal transduction protein [Metallosphaera cuprina Ar-4]
gi|329567310|gb|AEB95415.1| signal transduction protein [Metallosphaera cuprina Ar-4]
Length = 280
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 60/138 (43%), Gaps = 31/138 (22%)
Query: 81 GVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLAL 140
GV V ++MT V++ EA+ I+V + PV++ + VG+V++ D L
Sbjct: 72 GVSQVSNYMTVNP--MVIEENQDALEAITIMVTRNFGSLPVVNMLKRPVGIVTERDFLL- 128
Query: 141 DSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAA 200
MF ++D + + + +TP V + T LE A
Sbjct: 129 ------------MFQDLDQMFS----------------ISNFITPKVNTVFKETLLEQAV 160
Query: 201 RLLLETKYRRLPVVDADG 218
R +L +RRLPV+D +G
Sbjct: 161 RQMLRRGFRRLPVIDEEG 178
>gi|322374639|ref|ZP_08049153.1| CBS domain protein [Streptococcus sp. C300]
gi|419779644|ref|ZP_14305514.1| CBS domain protein [Streptococcus oralis SK10]
gi|419781162|ref|ZP_14306994.1| CBS domain protein [Streptococcus oralis SK100]
gi|321280139|gb|EFX57178.1| CBS domain protein [Streptococcus sp. C300]
gi|383184554|gb|EIC77068.1| CBS domain protein [Streptococcus oralis SK100]
gi|383186032|gb|EIC78508.1| CBS domain protein [Streptococcus oralis SK10]
Length = 218
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 69/131 (52%), Gaps = 20/131 (15%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT K + + P TTV A +++ E+ + PVI++D +LVGLV++ +I+
Sbjct: 3 VKDFMTRK--VVYISPDTTVAHAADLMREQGLHRLPVIEND-QLVGLVTE------GTIA 53
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+ + +T + E+ LL+KT V D+M V V +LEDA L+L
Sbjct: 54 EASPSK--------ATSLSIYEMNYLLNKTK---VKDVMIRDVVTVSGYASLEDATYLML 102
Query: 205 ETKYRRLPVVD 215
+ K LPVVD
Sbjct: 103 KNKIGILPVVD 113
>gi|390565046|ref|ZP_10245762.1| conserved hypothetical protein [Nitrolancetus hollandicus Lb]
gi|390171708|emb|CCF85092.1| conserved hypothetical protein [Nitrolancetus hollandicus Lb]
Length = 271
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 86/198 (43%), Gaps = 22/198 (11%)
Query: 24 SGRTSFALQLPCLLLSRPGCRVFSVLATSSDRVSALRRSSAVFASGTLTANSAAPSSGVY 83
+GR +L L + G RV +++ RV LR + L + +G
Sbjct: 75 AGRLMAEQRLNPLPVVDAGGRVVGIIS----RVDVLRTVTEPGLGIGLVEPVGSVETGAG 130
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TVG M+ ++ V + + L L R V+D + + +G+++D +LL
Sbjct: 131 TVGAVMS--RQVPAVGADAGLGDVLAALASSRQNRVVVVDGERRPIGVITDAELLR---- 184
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKT---NGKMVGDLMTPAPVVVRETTNLEDAA 200
R + + P + ++KL + NG DLM P VR T + +A
Sbjct: 185 ----RVEPAAQPGLAQVL-----MRKLGHREVVPNGARAVDLMLPRGETVRAETPVGEAI 235
Query: 201 RLLLETKYRRLPVVDADG 218
RL+LE Y+ LPVVDA+G
Sbjct: 236 RLMLERAYKILPVVDAEG 253
Score = 43.5 bits (101), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 47/100 (47%), Gaps = 6/100 (6%)
Query: 119 FPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKM 178
PV++ + +LVGLV+ DL+ G R + P +D + L +
Sbjct: 1 MPVVNREGRLVGLVTRGDLIE----RGGLRLRVELLPALDGA--AVERELRRLELESPMT 54
Query: 179 VGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADG 218
DLMT V VR T+L A RL+ E + LPVVDA G
Sbjct: 55 AADLMTRDVVTVRPETSLAAAGRLMAEQRLNPLPVVDAGG 94
>gi|392407165|ref|YP_006443773.1| contains C-terminal CBS domains [Anaerobaculum mobile DSM 13181]
gi|390620301|gb|AFM21448.1| putative transcriptional regulator, contains C-terminal CBS domains
[Anaerobaculum mobile DSM 13181]
Length = 154
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 58/115 (50%), Gaps = 16/115 (13%)
Query: 106 EALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA------LDSISGSGRADNSMFPEVDS 159
+A+++ ++TG PVI+ +W LVG +S+ D++ L++I+ S D +
Sbjct: 24 DAVKMFYIHKVTGVPVIEGNWCLVGFISESDIIKAALPTYLETITSSAFLDK------EG 77
Query: 160 TWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVV 214
F+++ + + V D MT + V + +L A L++ + +RLPVV
Sbjct: 78 ELGLFDKIHGI----GFRKVEDFMTKEVIYVEPSASLMSVADLMIRKRIKRLPVV 128
>gi|448350423|ref|ZP_21539236.1| peptidase M50 [Natrialba taiwanensis DSM 12281]
gi|445636693|gb|ELY89853.1| peptidase M50 [Natrialba taiwanensis DSM 12281]
Length = 420
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 35/57 (61%), Gaps = 4/57 (7%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVID----DDWKLVGLVSDYD 136
TV D MT LH V P T+V E ++ + +R TG+PVID D+ +LVGLV+ D
Sbjct: 250 TVADIMTPAGNLHTVSPETSVAELVQRMFSERHTGYPVIDTSGFDNGRLVGLVTLSD 306
>gi|405980177|ref|ZP_11038517.1| inosine-5'-monophosphate dehydrogenase [Actinomyces turicensis
ACS-279-V-Col4]
gi|404390629|gb|EJZ85696.1| inosine-5'-monophosphate dehydrogenase [Actinomyces turicensis
ACS-279-V-Col4]
Length = 508
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 55/122 (45%), Gaps = 31/122 (25%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P T+++ E+ R++G PV+D++ LVG++++ DL PE
Sbjct: 106 VGPDATIEQLDELCGHYRVSGLPVVDEENGLVGIITNRDL--------------RFVPE- 150
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAP--VVVRETTNLEDAARLLLETKYRRLPVVD 215
S W T V D MTP VV + + EDA LL E + +LP++D
Sbjct: 151 -SQWATLK-------------VRDCMTPREDLVVGQVGISREDAKALLAEHRVEKLPIID 196
Query: 216 AD 217
+
Sbjct: 197 EN 198
Score = 36.6 bits (83), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 33/54 (61%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 138
V D MT +E+L V + + ++A +L E R+ P+ID++ +L GL++ D +
Sbjct: 158 VRDCMTPREDLVVGQVGISREDAKALLAEHRVEKLPIIDENNRLTGLITVKDFV 211
>gi|392392580|ref|YP_006429182.1| signal transduction protein [Desulfitobacterium dehalogenans ATCC
51507]
gi|390523658|gb|AFL99388.1| putative signal-transduction protein containing cAMP-binding and
CBS domains [Desulfitobacterium dehalogenans ATCC 51507]
Length = 149
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 66/140 (47%), Gaps = 17/140 (12%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D M T + + P T + E ++L + I+G PV+D L+G+VS+ DLL
Sbjct: 3 VQDIMKTN--VITISPNTEIREIAKLLCDHHISGVPVLDFFGNLIGIVSEGDLLH----- 55
Query: 145 GSGRADNSMFPEVDS------TWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLED 198
+ N PE ++ + + L K ++MT + + + +E+
Sbjct: 56 ---KETNPRVPEAVGFLGALIYYRGVKQYESDLKKLVALKASEIMTQEVITLNKDATIEE 112
Query: 199 AARLLLETKYRRLPVVDADG 218
AA L+++ +RLP+++ DG
Sbjct: 113 AASLMIKHNVKRLPIME-DG 131
>gi|403253702|ref|ZP_10920003.1| putative anti-sigma regulatory factor, serine/threonine protein
kinase [Thermotoga sp. EMP]
gi|402811236|gb|EJX25724.1| putative anti-sigma regulatory factor, serine/threonine protein
kinase [Thermotoga sp. EMP]
Length = 321
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 54/121 (44%), Gaps = 29/121 (23%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P T+ EI+ KRI+G PV+DD ++VG+VS D++ ++ GS D
Sbjct: 29 VTPDKTLLHVKEIMRIKRISGVPVVDDKKRVVGIVSLEDIIK--ALEGSYIKDR------ 80
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
V MT V ++ET L+DA + + Y R PVVD +
Sbjct: 81 ---------------------VEKRMTKNVVCLKETDTLQDAVKTFEKYGYGRFPVVDDE 119
Query: 218 G 218
G
Sbjct: 120 G 120
>gi|315612837|ref|ZP_07887748.1| CBS domain protein [Streptococcus sanguinis ATCC 49296]
gi|315314947|gb|EFU62988.1| CBS domain protein [Streptococcus sanguinis ATCC 49296]
Length = 218
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 69/131 (52%), Gaps = 20/131 (15%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT K + + P TTV A +++ E+ + PVI++D +LVGLV++ +I+
Sbjct: 3 VKDFMTRK--VVYISPDTTVAHAADLMREQGLHRLPVIEND-QLVGLVTE------GTIA 53
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+ + +T + E+ LL+KT V D+M V V +LEDA L+L
Sbjct: 54 EASPSK--------ATSLSIYEMNYLLNKTK---VKDVMIRDVVTVSGYASLEDATYLML 102
Query: 205 ETKYRRLPVVD 215
+ K LPVVD
Sbjct: 103 KNKIGILPVVD 113
>gi|271966205|ref|YP_003340401.1| hypothetical protein [Streptosporangium roseum DSM 43021]
gi|270509380|gb|ACZ87658.1| CBS domain containing membrane protein [Streptosporangium roseum
DSM 43021]
Length = 232
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 60/134 (44%), Gaps = 2/134 (1%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D MTT ++ V +T + E+L+ ++ PV+D + ++G+VS+ DLL +
Sbjct: 5 VKDVMTT--QVSSVNGSTPFKDVAEVLIAHGVSALPVVDGEGHVIGVVSEADLLRKEEFR 62
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+ P ++ K +G LMT V + ++ A RL+
Sbjct: 63 ERYYREGYRPPLRARLRHRLSQEGTDGGKAHGDTAAQLMTAPAVTIGPRASIVTAVRLME 122
Query: 205 ETKYRRLPVVDADG 218
E +RLPVVD G
Sbjct: 123 EHGVKRLPVVDDAG 136
>gi|167630428|ref|YP_001680927.1| acetoin utilization protein, subunit b [Heliobacterium
modesticaldum Ice1]
gi|167593168|gb|ABZ84916.1| acetoin utilization protein, subunit b [Heliobacterium
modesticaldum Ice1]
Length = 212
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 66/132 (50%), Gaps = 24/132 (18%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D M +++VV P TTV EAL + +KR+ PV+ D+ +L+G++SD DL D
Sbjct: 3 VEDIMV--RQVYVVGPETTVLEALTLAEQKRVRHLPVV-DEGRLLGIISDRDL--RDVKP 57
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
ADN ++LS T K D++ + + V +EDAA++L
Sbjct: 58 SILEADNL----------------EILSTTRVK---DIVHTSIITVHPLDAIEDAAKMLY 98
Query: 205 ETKYRRLPVVDA 216
+ + LPVV A
Sbjct: 99 DHRIGCLPVVQA 110
>gi|405382733|ref|ZP_11036511.1| CBS-domain-containing membrane protein [Rhizobium sp. CF142]
gi|397320767|gb|EJJ25197.1| CBS-domain-containing membrane protein [Rhizobium sp. CF142]
Length = 220
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 62/129 (48%), Gaps = 9/129 (6%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGS 146
D MT+ + + P + A+ ++++ I+G PV+DD+ ++ G++++ DLL I +
Sbjct: 5 DIMTSN--VVSISPAAGIRHAVAVMMQNNISGLPVVDDEGRICGILTEGDLLLRREIRHA 62
Query: 147 GRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLET 206
R + D + + NG V D+M+ +V + + D A L
Sbjct: 63 PRTARNAEITSDVDLDRY-------IRGNGWSVRDIMSRDVIVASPDSEVSDIAESLEVH 115
Query: 207 KYRRLPVVD 215
+ +R+PVVD
Sbjct: 116 RIKRIPVVD 124
>gi|340758187|ref|ZP_08694778.1| inosine-5'-monophosphate dehydrogenase [Fusobacterium varium ATCC
27725]
gi|251835102|gb|EES63645.1| inosine-5'-monophosphate dehydrogenase [Fusobacterium varium ATCC
27725]
Length = 484
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 89/217 (41%), Gaps = 51/217 (23%)
Query: 5 VLPHSISVARLRAPPAGRTSGRTSFALQLPCLLLSRPGCRVFSVLATSSDRVSALRRSSA 64
VLPH +S+ +T+ L +P L + T SD AL R
Sbjct: 24 VLPHEVSL---------KTNLTKDIVLNVPVLSAAMD-------TVTESDLAIALARQGG 67
Query: 65 V-FASGTLT-ANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVI 122
+ F ++ A+ AA V + M +K TV A +++ +I+G PVI
Sbjct: 68 IGFIHKNMSIADQAAEVDRVKRIESGMIRNPV--TLKEDCTVGFAEDLMRRYKISGLPVI 125
Query: 123 DDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDL 182
+DD KL+G+V++ D+ K ++++L+ + M +
Sbjct: 126 EDDGKLIGIVTNRDI------------------------KYHKDMEQLVGEI---MTKEN 158
Query: 183 MTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGW 219
+ APV T LE A +LL + +LP+ D G+
Sbjct: 159 LITAPV----GTTLEQAKEVLLSNRIEKLPITDESGY 191
>gi|423328439|ref|ZP_17306246.1| hypothetical protein HMPREF9711_01820 [Myroides odoratimimus CCUG
3837]
gi|404604875|gb|EKB04491.1| hypothetical protein HMPREF9711_01820 [Myroides odoratimimus CCUG
3837]
Length = 138
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 55/113 (48%), Gaps = 19/113 (16%)
Query: 106 EALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFN 165
E +LVE I PVI+ + +VG++S D+L + G G D +D+ + +
Sbjct: 26 EVNRLLVEYNIRHIPVIEAE-NVVGIISSNDILKI----GYGANDLGQ-SALDAIYDAYK 79
Query: 166 EVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADG 218
+ D+MT P+VV + TN++D A + + ++ LPVVD D
Sbjct: 80 -------------LEDVMTKNPIVVMDDTNIKDVAEIFSKQQFHSLPVVDKDN 119
>gi|420239145|ref|ZP_14743489.1| CBS-domain-containing membrane protein [Rhizobium sp. CF080]
gi|398082308|gb|EJL73063.1| CBS-domain-containing membrane protein [Rhizobium sp. CF080]
Length = 220
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 65/131 (49%), Gaps = 15/131 (11%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGS 146
D MTT+ +HV P ++ A+ +L++ I+G PVIDD L G++++ D+L
Sbjct: 5 DLMTTRV-VHV-SPGASLRHAIRMLIDNDISGLPVIDDQGALCGMITEGDIL-------- 54
Query: 147 GRADNSMFPEV--DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
R + ++ P+ D+ F E KT+G V D M+ + V L + L+
Sbjct: 55 NRYEFNLAPKAAPDTNDPAFFENY---VKTHGLKVEDCMSRKVISVSPEAPLAEIVALMR 111
Query: 205 ETKYRRLPVVD 215
+R+PV+D
Sbjct: 112 LHAVKRIPVLD 122
>gi|440634832|gb|ELR04751.1| hypothetical protein GMDG_06979 [Geomyces destructans 20631-21]
Length = 675
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 54/120 (45%), Gaps = 26/120 (21%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
+KP TTV EA +++ KR V DDD ++ G+ + DL + G+G NS+
Sbjct: 108 IKPNTTVAEAAQLMAAKREDCVLVTDDDDRIAGIFTAKDLAY--RVVGAGIKANSI---- 161
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
+ ++MT P+ R T+ DA L++ +R LPV+D +
Sbjct: 162 --------------------TIAEIMTKNPLCARTDTSATDALDLMVRKGFRHLPVMDEN 201
>gi|330823694|ref|YP_004386997.1| signal transduction protein [Alicycliphilus denitrificans K601]
gi|329309066|gb|AEB83481.1| putative signal transduction protein with CBS domains
[Alicycliphilus denitrificans K601]
Length = 225
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 66/134 (49%), Gaps = 21/134 (15%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D MT E+ + T ++ +A + L ++++ PV+D ++VGL+ D+ + D
Sbjct: 88 VSDVMT--REVSSLPATMSIQDAWQALRLEQLSQAPVVDARGQVVGLLRRSDMASAD--- 142
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+ P++D +TF + + ++ +++PAP V + T+L A+ +L
Sbjct: 143 --------LLPDLDGIKRTFAQAHRPITDV-------MLSPAPTV-SDDTDLRRVAKAML 186
Query: 205 ETKYRRLPVVDADG 218
ET LPV D G
Sbjct: 187 ETGLSGLPVTDEAG 200
>gi|269469032|gb|EEZ80596.1| signal-transduction protein [uncultured SUP05 cluster bacterium]
gi|269469202|gb|EEZ80738.1| hypothetical protein Sup05_0144 [uncultured SUP05 cluster
bacterium]
Length = 148
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 60/133 (45%), Gaps = 18/133 (13%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D M+T + V P V + +++ I+G PV+DD LVG++S+ D+L
Sbjct: 3 VQDIMST--NVKTVGPDDLVKDIAILMIMDHISGAPVVDDGNNLVGIISEKDIL------ 54
Query: 145 GSGRADNSMFPEVDS----TWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAA 200
MFP++D T+ F ++ T +G+LMT + AA
Sbjct: 55 ------QHMFPKLDEVMSDTYFDFENMEHNYKDTMNVKIGELMTKEVASIDLDMPCLKAA 108
Query: 201 RLLLETKYRRLPV 213
+ ++RR+PV
Sbjct: 109 STMWLKRFRRIPV 121
>gi|410463871|ref|ZP_11317355.1| putative signal-transduction protein (cAMP-binding and CBS domain
containing protein) [Desulfovibrio magneticus str.
Maddingley MBC34]
gi|409982989|gb|EKO39394.1| putative signal-transduction protein (cAMP-binding and CBS domain
containing protein) [Desulfovibrio magneticus str.
Maddingley MBC34]
Length = 220
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 59/120 (49%), Gaps = 17/120 (14%)
Query: 99 KPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVD 158
K TT++ +A +++ E PV+DDD +LVG+++D D+ A S +D
Sbjct: 15 KATTSIMKAAKLMKENGFGRLPVVDDDGRLVGIITDRDV---------KEASPSKATTLD 65
Query: 159 STWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADG 218
+E+ LLS+ VGD+MT + V +E AA L+L +PVVD G
Sbjct: 66 -----MHELYYLLSEIK---VGDIMTKTVITVGPDDTVEKAAVLMLRHNVGGMPVVDDKG 117
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 27/41 (65%)
Query: 178 MVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADG 218
++ D M+ PV + TT++ AA+L+ E + RLPVVD DG
Sbjct: 2 LIKDWMSKTPVTAKATTSIMKAAKLMKENGFGRLPVVDDDG 42
Score = 38.1 bits (87), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 38/62 (61%), Gaps = 3/62 (4%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL-ALDSI 143
VGD MT + + V P TV++A +++ + G PV+DD +VG+++D D+ L SI
Sbjct: 78 VGDIMT--KTVITVGPDDTVEKAAVLMLRHNVGGMPVVDDKGLVVGVITDSDIFKVLVSI 135
Query: 144 SG 145
+G
Sbjct: 136 TG 137
>gi|365875256|ref|ZP_09414785.1| inosine-5'-monophosphate dehydrogenase [Elizabethkingia anophelis
Ag1]
gi|442588350|ref|ZP_21007162.1| inosine-5'-monophosphate dehydrogenase [Elizabethkingia anophelis
R26]
gi|365756904|gb|EHM98814.1| inosine-5'-monophosphate dehydrogenase [Elizabethkingia anophelis
Ag1]
gi|442562055|gb|ELR79278.1| inosine-5'-monophosphate dehydrogenase [Elizabethkingia anophelis
R26]
Length = 486
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 61/115 (53%), Gaps = 31/115 (26%)
Query: 103 TVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWK 162
T+ EA ++ +I+G PV+D+D KL+G++++ D+ + E D K
Sbjct: 108 TLGEAKGMMAHYKISGLPVVDNDNKLIGIITNRDV---------------KYQE-DLGLK 151
Query: 163 TFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
V+++++K N +V ++T LE+A +LL+++ +LP+VD++
Sbjct: 152 ----VEEIMTKDN-----------LIVSHKSTTLEEAKEILLKSRVEKLPIVDSE 191
Score = 43.5 bits (101), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 34/49 (69%)
Query: 89 MTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL 137
+ TK+ L V +TT++EA EIL++ R+ P++D + KLVGL++ D+
Sbjct: 155 IMTKDNLIVSHKSTTLEEAKEILLKSRVEKLPIVDSENKLVGLITIKDI 203
>gi|417935427|ref|ZP_12578746.1| CBS domain protein [Streptococcus mitis bv. 2 str. F0392]
gi|340769920|gb|EGR92438.1| CBS domain protein [Streptococcus mitis bv. 2 str. F0392]
Length = 218
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 69/131 (52%), Gaps = 20/131 (15%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT K + + P TTV A +++ E+ + PVI++D +LVGLV++ +I+
Sbjct: 3 VKDFMTRK--VVYISPDTTVAHAADLMREQGLHRLPVIEND-QLVGLVTE------GTIA 53
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+ + +T + E+ LL+KT V D+M + V +LEDA L+L
Sbjct: 54 EASPSK--------ATSLSIYEMNYLLNKTK---VKDVMIRDVITVSGYASLEDATYLML 102
Query: 205 ETKYRRLPVVD 215
+ K LPVVD
Sbjct: 103 KNKIGILPVVD 113
>gi|297197552|ref|ZP_06914949.1| CBS domain-containing protein [Streptomyces sviceus ATCC 29083]
gi|197715576|gb|EDY59610.1| CBS domain-containing protein [Streptomyces sviceus ATCC 29083]
Length = 223
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 58/119 (48%), Gaps = 15/119 (12%)
Query: 103 TVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWK 162
T E + ++ + +++ PV++ + ++VGLVS+ DLL + DS
Sbjct: 13 TFKEIVRLMQDWKVSALPVLEGEGRVVGLVSEADLLPKEEFR-------------DSDPD 59
Query: 163 TFNEVQKL--LSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGW 219
+ ++++L L+K +LMT + R L AAR + ++ +RLPVV+ G
Sbjct: 60 RYTQLRRLSDLAKAGAVTAEELMTSPALTTRPDATLAQAARTMAHSRVKRLPVVNELGM 118
>gi|237511946|gb|ACQ99689.1| putative bile efflux protein [Bifidobacterium breve UCC2003]
gi|339479060|gb|ABE95522.1| Multidrug resistance protein B, MFS member, bile efflux, induced
upon bile salt exposure [Bifidobacterium breve UCC2003]
Length = 683
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 56/110 (50%), Gaps = 6/110 (5%)
Query: 111 LVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNE--VQ 168
+ ++ PV++ D +LVG VSD D+L S + ++ ST F++ V
Sbjct: 553 FIRLNVSSLPVVNGDGRLVGFVSDGDVLK----SIATYESRTVSTGTGSTMVVFDDETVA 608
Query: 169 KLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADG 218
+ +GK V D+ T V ++ + AR+L + ++++LPVV+ DG
Sbjct: 609 SKVQALSGKKVMDIATRKVVTATPDQHVGEVARILAKKQFKKLPVVNGDG 658
>gi|325677911|ref|ZP_08157553.1| inosine-5'-monophosphate dehydrogenase [Ruminococcus albus 8]
gi|324110465|gb|EGC04639.1| inosine-5'-monophosphate dehydrogenase [Ruminococcus albus 8]
Length = 493
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 61/116 (52%), Gaps = 31/116 (26%)
Query: 103 TVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWK 162
TV+EA +++ + +I+G P++D++ KL G++++ DL + S
Sbjct: 111 TVEEADKLMGKYKISGVPIVDENGKLEGILTNRDLRFITDFS------------------ 152
Query: 163 TFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADG 218
++ K++++ N + APV T+L+ A ++L++ K +LP+VD DG
Sbjct: 153 --IKIGKVMTREN-------LVTAPV----DTDLDGAKKILMQHKIEKLPLVDGDG 195
>gi|418466974|ref|ZP_13037875.1| hypothetical protein SMCF_751 [Streptomyces coelicoflavus ZG0656]
gi|371552443|gb|EHN79690.1| hypothetical protein SMCF_751 [Streptomyces coelicoflavus ZG0656]
Length = 224
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 69/135 (51%), Gaps = 12/135 (8%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TV D M+ + + V+ T E +L+E IT PV+D + + VG+VS+ DLL +
Sbjct: 5 TVRDLMS--DAVVRVQRGTPFKEIAHLLLEYDITAVPVVDGENRPVGVVSEADLL--QKM 60
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
G G D S PE + + + +G LMT P+ RE+ ++ +AAR++
Sbjct: 61 WG-GEPDGS--PEHAEWSRAAAAGKADATDADG-----LMTSPPLCARESWSVVEAARVM 112
Query: 204 LETKYRRLPVVDADG 218
+ +RL VVD +G
Sbjct: 113 ARHRIKRLLVVDEEG 127
>gi|433592818|ref|YP_007282314.1| Zn-dependent protease [Natrinema pellirubrum DSM 15624]
gi|448335263|ref|ZP_21524413.1| peptidase M50 [Natrinema pellirubrum DSM 15624]
gi|433307598|gb|AGB33410.1| Zn-dependent protease [Natrinema pellirubrum DSM 15624]
gi|445617644|gb|ELY71238.1| peptidase M50 [Natrinema pellirubrum DSM 15624]
Length = 412
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 38/63 (60%), Gaps = 3/63 (4%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVID---DDWKLVGLVSDYDLLAL 140
TV D MT E+LH V P TTV E +E + +R TG+PV++ +LVGLV+ D +
Sbjct: 257 TVDDIMTPVEDLHTVDPDTTVAELIERMFRERHTGYPVVERGAGGERLVGLVALSDAREV 316
Query: 141 DSI 143
D +
Sbjct: 317 DQV 319
>gi|448383923|ref|ZP_21562921.1| peptidase M50 [Haloterrigena thermotolerans DSM 11522]
gi|445658912|gb|ELZ11724.1| peptidase M50 [Haloterrigena thermotolerans DSM 11522]
Length = 412
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 38/63 (60%), Gaps = 3/63 (4%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVID---DDWKLVGLVSDYDLLAL 140
TVGD MT E+LH V+P TTV +E + +R TG+PV++ LVGLV+ D +
Sbjct: 257 TVGDIMTPVEDLHTVEPDTTVAVLIERMFRERHTGYPVVERSATGEGLVGLVTLSDAREI 316
Query: 141 DSI 143
D +
Sbjct: 317 DQV 319
>gi|149020395|ref|ZP_01835287.1| hypothetical protein CGSSp23BS72_06469 [Streptococcus pneumoniae
SP23-BS72]
gi|303260018|ref|ZP_07345992.1| AcuB family protein [Streptococcus pneumoniae SP-BS293]
gi|303261424|ref|ZP_07347372.1| AcuB family protein [Streptococcus pneumoniae SP14-BS292]
gi|303264091|ref|ZP_07350012.1| AcuB family protein [Streptococcus pneumoniae BS397]
gi|303266296|ref|ZP_07352187.1| AcuB family protein [Streptococcus pneumoniae BS457]
gi|303269537|ref|ZP_07355301.1| AcuB family protein [Streptococcus pneumoniae BS458]
gi|418139068|ref|ZP_12775899.1| CBS domain pair family protein [Streptococcus pneumoniae GA13338]
gi|418180110|ref|ZP_12816682.1| CBS domain pair family protein [Streptococcus pneumoniae GA41688]
gi|421240318|ref|ZP_15696866.1| CBS domain pair family protein [Streptococcus pneumoniae 2080913]
gi|421297359|ref|ZP_15748062.1| CBS domain pair family protein [Streptococcus pneumoniae GA58581]
gi|147930697|gb|EDK81679.1| hypothetical protein CGSSp23BS72_06469 [Streptococcus pneumoniae
SP23-BS72]
gi|302637558|gb|EFL68045.1| AcuB family protein [Streptococcus pneumoniae SP14-BS292]
gi|302638937|gb|EFL69398.1| AcuB family protein [Streptococcus pneumoniae SP-BS293]
gi|302640922|gb|EFL71305.1| AcuB family protein [Streptococcus pneumoniae BS458]
gi|302644226|gb|EFL74482.1| AcuB family protein [Streptococcus pneumoniae BS457]
gi|302646496|gb|EFL76722.1| AcuB family protein [Streptococcus pneumoniae BS397]
gi|353846076|gb|EHE26111.1| CBS domain pair family protein [Streptococcus pneumoniae GA41688]
gi|353905905|gb|EHE81321.1| CBS domain pair family protein [Streptococcus pneumoniae GA13338]
gi|395609255|gb|EJG69343.1| CBS domain pair family protein [Streptococcus pneumoniae 2080913]
gi|395892933|gb|EJH03923.1| CBS domain pair family protein [Streptococcus pneumoniae GA58581]
Length = 218
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 67/131 (51%), Gaps = 20/131 (15%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT K + + P TTV A +++ E+ + PVI++D +LVGLV++ +
Sbjct: 3 VKDFMTRK--VVYISPDTTVSHAADLMREQGLHRLPVIEND-QLVGLVTEGTI------- 52
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+A S +T + E+ LL+K V D+M V V +LEDA L+L
Sbjct: 53 --AQASPS-----KATSLSIYEMNYLLNKIK---VKDVMIRDVVTVSGYASLEDATYLML 102
Query: 205 ETKYRRLPVVD 215
+ K LPVVD
Sbjct: 103 KNKIGILPVVD 113
>gi|345868322|ref|ZP_08820314.1| CBS domain pair family protein [Bizionia argentinensis JUB59]
gi|344047243|gb|EGV42875.1| CBS domain pair family protein [Bizionia argentinensis JUB59]
Length = 156
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 57/131 (43%), Gaps = 25/131 (19%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D+MT +L KP TVDE + L+ +I+G PV++ +LVG++S+ D L
Sbjct: 24 VSDYMT--RDLITFKPEHTVDEVIHALIANKISGGPVVNAKNELVGIISEGDCL------ 75
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
K E +VG+ M + ++ +AA+ L
Sbjct: 76 -----------------KQITESHYYNMPVEQDVVGNRMVKNVETIDGDMDVFEAAKKFL 118
Query: 205 ETKYRRLPVVD 215
+K RR P+V+
Sbjct: 119 NSKIRRFPIVE 129
>gi|417920057|ref|ZP_12563575.1| CBS domain protein [Streptococcus australis ATCC 700641]
gi|342831164|gb|EGU65487.1| CBS domain protein [Streptococcus australis ATCC 700641]
Length = 218
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 68/133 (51%), Gaps = 20/133 (15%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT K + + P TT+ A +++ E+ + PVI++D KLVGLV++ + S
Sbjct: 3 VKDFMTRK--VVYISPDTTIAHAADLMREQGLHRLPVIEND-KLVGLVTEG---TIAEAS 56
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
S S+F E+ LL+KT V D+M + V + +LEDA L+
Sbjct: 57 PSKATSLSIF-----------EMNYLLNKTK---VKDVMLRDVITVSKFASLEDATYLMY 102
Query: 205 ETKYRRLPVVDAD 217
+ K LPVVD +
Sbjct: 103 KNKVGILPVVDNE 115
>gi|312897895|ref|ZP_07757309.1| CBS domain pair [Megasphaera micronuciformis F0359]
gi|310620990|gb|EFQ04536.1| CBS domain pair [Megasphaera micronuciformis F0359]
Length = 158
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 56/116 (48%), Gaps = 2/116 (1%)
Query: 100 PTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDS 159
P+TTV + +++ ++ +IT P+++DD L G+V+D DLL N + +
Sbjct: 19 PSTTVLDLIQLFIKNKITSIPIVNDDGTLAGIVTDADLLYKKIKPHVPHYVNLLGASI-- 76
Query: 160 TWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVD 215
+ +E K K +LMT ++ ++E A +++ + +P+VD
Sbjct: 77 YYNGISEYDKSFKKLMASTAKELMTKDVIIAAPDADVEQLAGVMVAEHLKVIPIVD 132
>gi|281412866|ref|YP_003346945.1| putative anti-sigma regulatory factor, serine/threonine protein
kinase [Thermotoga naphthophila RKU-10]
gi|281373969|gb|ADA67531.1| putative anti-sigma regulatory factor, serine/threonine protein
kinase [Thermotoga naphthophila RKU-10]
Length = 321
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 54/118 (45%), Gaps = 29/118 (24%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P T+ EI+ KRI+G PV+DD ++VG+VS D++ ++ GS D+
Sbjct: 29 VTPDKTLLHVKEIMRIKRISGVPVVDDKKRVVGIVSLEDIIK--ALEGSYIKDS------ 80
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVD 215
V MT V ++ET L+DA ++ + Y R PVVD
Sbjct: 81 ---------------------VEKRMTKNVVCLKETDTLQDAVKIFEKYGYGRFPVVD 117
Score = 36.6 bits (83), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 29/43 (67%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLAL 140
+K T T+ +A++I + FPV+DD+ KLVG+V+ +D++
Sbjct: 92 LKETDTLQDAVKIFEKYGYGRFPVVDDEEKLVGIVTKHDIIYF 134
>gi|147678461|ref|YP_001212676.1| CBS domain-containing protein [Pelotomaculum thermopropionicum SI]
gi|146274558|dbj|BAF60307.1| FOG: CBS domain [Pelotomaculum thermopropionicum SI]
Length = 211
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 65/132 (49%), Gaps = 19/132 (14%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V D+MT L V T + EALEI+ + +I PV+ + L GLV++ +LL ++S
Sbjct: 3 VRDYMT--RNLITVDKKTGIFEALEIMKKHKIRQLPVVSAEGHLEGLVTEKELL---TVS 57
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
S S++ E+ LL+K V + M P+ V T LE+AA L+
Sbjct: 58 PSPATSLSIY-----------ELNYLLAKMT---VAEAMVKNPLTVTTDTTLEEAALLMR 103
Query: 205 ETKYRRLPVVDA 216
E K +PV++
Sbjct: 104 EHKIGSVPVMEG 115
>gi|88808652|ref|ZP_01124162.1| CBS domain protein [Synechococcus sp. WH 7805]
gi|88787640|gb|EAR18797.1| CBS domain protein [Synechococcus sp. WH 7805]
Length = 156
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 69/138 (50%), Gaps = 12/138 (8%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TVG+ M+ + V P T + +A+ +L + I+G PV+ DD LVG +++ +L+ +S
Sbjct: 6 TVGEVMSAP--VLTVTPATPLKDAVTLLSDHHISGVPVVGDDGTLVGELTEQNLMVRESG 63
Query: 144 SGSG----RADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDA 199
+G D+ ++ W +V ++L G V DLM+ ++ L A
Sbjct: 64 VDAGPYVMLLDSVIYLRNPLNWD--KQVHQVL----GNTVADLMSRDSHCCAQSLPLPKA 117
Query: 200 ARLLLETKYRRLPVVDAD 217
A +L E +RL VVD +
Sbjct: 118 ASMLHEKGTQRLIVVDEE 135
>gi|87303510|ref|ZP_01086293.1| CBS protein [Synechococcus sp. WH 5701]
gi|87281923|gb|EAQ73886.1| CBS protein [Synechococcus sp. WH 5701]
Length = 144
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 59/120 (49%), Gaps = 2/120 (1%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V PTT + EA++++ + I+G PV+D+ L+ +S+ DL+ + SG M +
Sbjct: 8 VTPTTPLQEAVKLMSDHHISGLPVLDEQGALIAELSEQDLMVRE--SGFDAGPYVMLLDA 65
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
+ + K + + G VGD+M+ P L AA+LL + +RL V + +
Sbjct: 66 VIYLRNPLDWDKQVHQVLGNTVGDVMSRHPHSCSAEVTLAAAAKLLHDRSTQRLFVREGE 125
>gi|405382811|ref|ZP_11036588.1| putative signal-transduction protein containing cAMP-binding and
CBS domain containing protein [Rhizobium sp. CF142]
gi|397320739|gb|EJJ25170.1| putative signal-transduction protein containing cAMP-binding and
CBS domain containing protein [Rhizobium sp. CF142]
Length = 160
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 67/133 (50%), Gaps = 18/133 (13%)
Query: 89 MTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGR 148
MTT +L V P TTV EA +++ +T PV+D D +L+GLVS+ D++ R
Sbjct: 9 MTT--DLVTVSPDTTVAEAARLMLLHHVTAVPVVDADKRLLGLVSEGDVM---------R 57
Query: 149 ADNSMFPEVDSTW-KTFNEVQKLLS------KTNGKMVGDLMTPAPVVVRETTNLEDAAR 201
+ F + W + E + L + N + V ++M + + E +L + A
Sbjct: 58 HFGAQFQSKRAQWLRMLAEGEALAPEFLAEIRINQQHVREMMHTSIISGDEEASLAELAD 117
Query: 202 LLLETKYRRLPVV 214
L+L+ + +R+P++
Sbjct: 118 LMLKHQIKRVPIL 130
>gi|374630604|ref|ZP_09702989.1| inosine-5'-monophosphate dehydrogenase [Methanoplanus limicola DSM
2279]
gi|373908717|gb|EHQ36821.1| inosine-5'-monophosphate dehydrogenase [Methanoplanus limicola DSM
2279]
Length = 490
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 53/121 (43%), Gaps = 31/121 (25%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V +TV + ++ E I+G PVI++ K+VG+VS DL
Sbjct: 103 VDINSTVSDVDYLMNENNISGVPVIEN-GKVVGIVSRRDL-------------------- 141
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
W + SK + + +MT P+ V E +LEDA ++ K RLPV +D
Sbjct: 142 --RW--------IASKKGAENIRTVMTSGPITVNEDISLEDAIEVMYNNKVERLPVTSSD 191
Query: 218 G 218
G
Sbjct: 192 G 192
>gi|387880022|ref|YP_006310325.1| acetoin utilization putative/CBS domain-containing protein
[Streptococcus parasanguinis FW213]
gi|386793472|gb|AFJ26507.1| acetoin utilization putative/CBS domain-containing protein
[Streptococcus parasanguinis FW213]
Length = 253
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 75/146 (51%), Gaps = 22/146 (15%)
Query: 74 NSAAPSSG--VYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGL 131
N + S G V V DFMT K + + P TT+ A +++ E+ + PVI++D +LVGL
Sbjct: 25 NKTSKSIGELVMAVKDFMTRK--VVYISPDTTIAHAADLMREQGLHRLPVIEND-QLVGL 81
Query: 132 VSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVR 191
V++ +I+ + + +T + E+ LL+KT V D+M + V
Sbjct: 82 VTE------GTIAEASPSK--------ATSLSIYEMNYLLNKTK---VKDVMLRDVITVS 124
Query: 192 ETTNLEDAARLLLETKYRRLPVVDAD 217
+ +LEDA L+ + K LPVVD +
Sbjct: 125 KFASLEDATYLMYKNKVGILPVVDNE 150
>gi|33862790|ref|NP_894350.1| IMP dehydrogenase [Prochlorococcus marinus str. MIT 9313]
gi|33634706|emb|CAE20692.1| similar to IMP dehydrogenase [Prochlorococcus marinus str. MIT
9313]
Length = 146
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 62/122 (50%), Gaps = 10/122 (8%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSG----RADNSM 153
V P T++ EA+++L + I+G PV++DD LVG +++ DL+ +S +G D+ +
Sbjct: 8 VVPATSLQEAVQLLSDHHISGLPVVNDDGTLVGELTEQDLMVRESGVDAGPYVLLLDSVI 67
Query: 154 FPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPV 213
+ W +V ++L G V DLM E L AA +L + +RL V
Sbjct: 68 YLRNPLNWD--KQVHQVL----GTSVNDLMRSDTHTCNEALPLPRAAAMLHDRSTQRLFV 121
Query: 214 VD 215
++
Sbjct: 122 IN 123
>gi|344940460|ref|ZP_08779748.1| CBS domain containing membrane protein [Methylobacter tundripaludum
SV96]
gi|344261652|gb|EGW21923.1| CBS domain containing membrane protein [Methylobacter tundripaludum
SV96]
Length = 386
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 62/121 (51%), Gaps = 8/121 (6%)
Query: 97 VVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPE 156
VV+ T V+EA +I+ ++++ PVID +++G+++ D ++S +
Sbjct: 246 VVEYGTEVEEAWKIMHKQKLKAMPVIDRARRVIGIITWNDFFKFINLSA--------YES 297
Query: 157 VDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDA 216
++ F +S + VG +MT + V+ E+ ++ D L+ YR++P+V++
Sbjct: 298 FQDRFRAFIRRTPDVSTDKPESVGHMMTTSVTVLPESAHIADLISLMSTQGYRQIPIVNS 357
Query: 217 D 217
+
Sbjct: 358 E 358
>gi|330838326|ref|YP_004412906.1| CBS domain containing protein [Selenomonas sputigena ATCC 35185]
gi|402835105|ref|ZP_10883688.1| CBS domain protein [Selenomonas sp. CM52]
gi|329746090|gb|AEB99446.1| CBS domain containing protein [Selenomonas sputigena ATCC 35185]
gi|402276212|gb|EJU25330.1| CBS domain protein [Selenomonas sp. CM52]
Length = 216
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 56/115 (48%), Gaps = 17/115 (14%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P T V A +++ + R PV+D+D KLVG +SD D++ + P
Sbjct: 14 VTPDTKVSAAKDLMKKHRFRRLPVVDEDGKLVGFLSDRDIMRVS-------------PSP 60
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLP 212
+T + E+ LL+K +G++M V V++ +E+AA ++ K LP
Sbjct: 61 ATTLSRY-EITSLLAKM---CIGEIMQKEVVSVKDDATIEEAALIMYNHKIGGLP 111
>gi|299542092|ref|ZP_07052408.1| inosine-5'-monophosphate dehydrogenase [Lysinibacillus fusiformis
ZC1]
gi|424740275|ref|ZP_18168678.1| inosine-5'-monophosphate dehydrogenase [Lysinibacillus fusiformis
ZB2]
gi|298725407|gb|EFI66055.1| inosine-5'-monophosphate dehydrogenase [Lysinibacillus fusiformis
ZC1]
gi|422946177|gb|EKU40595.1| inosine-5'-monophosphate dehydrogenase [Lysinibacillus fusiformis
ZB2]
Length = 487
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 65/121 (53%), Gaps = 33/121 (27%)
Query: 100 PTTTVDEALEILVEKRITGFPVID--DDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
PT V +A ++ + RI+G P++D ++ KLVG++++ DL + +D S+
Sbjct: 104 PTHQVFDAEHLMGKYRISGVPIVDSMENQKLVGIITNRDLRFI--------SDYSL---- 151
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
+++ +++K DL+T APV T LEDA ++L + K +LP+VD +
Sbjct: 152 --------KIEDVMTKE------DLIT-APV----GTTLEDAEKILQQYKIEKLPIVDEE 192
Query: 218 G 218
G
Sbjct: 193 G 193
>gi|254431490|ref|ZP_05045193.1| CBS [Cyanobium sp. PCC 7001]
gi|197625943|gb|EDY38502.1| CBS [Cyanobium sp. PCC 7001]
Length = 145
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 57/119 (47%), Gaps = 6/119 (5%)
Query: 102 TTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTW 161
T + EA++++ E I G PV+D LVG +++ DL+ + SG +D+
Sbjct: 12 TPLQEAVKLMSEHHIGGMPVLDQAGSLVGELTEQDLM----VRESGFDAGPYVMLLDAVI 67
Query: 162 KTFNEVQ--KLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADG 218
N +Q + + + G VG++M L AAR L E+ +RL VVD DG
Sbjct: 68 YLRNPLQWDRQVHQVLGSTVGEVMRKGSHTCSADLPLPAAARQLHESATQRLFVVDGDG 126
>gi|448460309|ref|ZP_21597134.1| peptidase M50 [Halorubrum lipolyticum DSM 21995]
gi|445807050|gb|EMA57136.1| peptidase M50 [Halorubrum lipolyticum DSM 21995]
Length = 395
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 59/132 (44%), Gaps = 30/132 (22%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TV D MT +E+LHVV T+V E + + E+R TG+PV+ D LVG+V+ D
Sbjct: 250 TVADVMTRREDLHVVTEDTSVAELMSRMFEERHTGYPVLHGD-DLVGMVTLEDA------ 302
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
++ EV++ + V D+M V V + A + +
Sbjct: 303 ------------------RSIREVER-----DAYQVADVMESEVVGVGPEVDAMTALQTM 339
Query: 204 LETKYRRLPVVD 215
E RLPVVD
Sbjct: 340 QENGVGRLPVVD 351
>gi|126652925|ref|ZP_01725067.1| inositol-5-monophosphate dehydrogenase [Bacillus sp. B14905]
gi|126590255|gb|EAZ84377.1| inositol-5-monophosphate dehydrogenase [Bacillus sp. B14905]
Length = 487
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 65/121 (53%), Gaps = 33/121 (27%)
Query: 100 PTTTVDEALEILVEKRITGFPVID--DDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
PT V +A ++ + RI+G P++D ++ KLVG++++ DL + +D S+
Sbjct: 104 PTHQVFDAEHLMGKYRISGVPIVDSMENQKLVGIITNRDLRFI--------SDYSL---- 151
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
+++ +++K DL+T APV T LEDA ++L + K +LP+VD +
Sbjct: 152 --------KIEDVMTKE------DLIT-APV----GTTLEDAEKILQQYKIEKLPIVDEE 192
Query: 218 G 218
G
Sbjct: 193 G 193
>gi|83590685|ref|YP_430694.1| hypothetical protein Moth_1851 [Moorella thermoacetica ATCC 39073]
gi|83573599|gb|ABC20151.1| CBS domain containing membrane protein [Moorella thermoacetica ATCC
39073]
Length = 120
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 54/127 (42%), Gaps = 35/127 (27%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGS 146
D MTT + + P+ + E +L EK+I+G PV D D +VG+V + DLL L
Sbjct: 5 DIMTTN--VITITPSARIYELTRLLAEKQISGVPVCDGDNHVVGIVGEADLLGL------ 56
Query: 147 GRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLET 206
NG +V D+M+ + V +E A +L E
Sbjct: 57 ---------------------------VNGHLVRDIMSQPVIGVDAEDPVEKVAAILHEK 89
Query: 207 KYRRLPV 213
+ +R+PV
Sbjct: 90 RIKRVPV 96
>gi|169825631|ref|YP_001695789.1| inosine-5'-monophosphate dehydrogenase [Lysinibacillus sphaericus
C3-41]
gi|168990119|gb|ACA37659.1| Inosine-5'-monophosphate dehydrogenase [Lysinibacillus sphaericus
C3-41]
Length = 487
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 65/121 (53%), Gaps = 33/121 (27%)
Query: 100 PTTTVDEALEILVEKRITGFPVID--DDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
PT V +A ++ + RI+G P++D ++ KLVG++++ DL + +D S+
Sbjct: 104 PTHQVFDAEHLMGKYRISGVPIVDSMENQKLVGIITNRDLRFI--------SDYSL---- 151
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
+++ +++K DL+T APV T LEDA ++L + K +LP+VD +
Sbjct: 152 --------KIEDVMTKE------DLIT-APV----GTTLEDAEKILQQYKIEKLPIVDEE 192
Query: 218 G 218
G
Sbjct: 193 G 193
>gi|86748495|ref|YP_484991.1| hypothetical protein RPB_1370 [Rhodopseudomonas palustris HaA2]
gi|86571523|gb|ABD06080.1| CBS domain containing membrane protein [Rhodopseudomonas palustris
HaA2]
Length = 171
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 62/137 (45%), Gaps = 28/137 (20%)
Query: 84 TVGDFMTTKEELHVVKPTT---TVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLAL 140
TV D MT VKP T T+ E + +PV++ + +GLV+ YD L
Sbjct: 36 TVADHMTRS-----VKPVTREMTMRELEDQFERDDYNAYPVLEGS-RAIGLVTKYDFLNC 89
Query: 141 DSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAA 200
+ + M P D L+++T VGD+MTP + V T L
Sbjct: 90 FAFHPT-----QMLPHYDD----------LMNRT----VGDIMTPDFIYVHADTKLTRVL 130
Query: 201 RLLLETKYRRLPVVDAD 217
+L++E + R +PV+DAD
Sbjct: 131 QLMVEHQTRSIPVLDAD 147
>gi|312866291|ref|ZP_07726509.1| CBS domain protein [Streptococcus downei F0415]
gi|311097985|gb|EFQ56211.1| CBS domain protein [Streptococcus downei F0415]
Length = 219
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 47/131 (35%), Positives = 71/131 (54%), Gaps = 24/131 (18%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT K + V P TTV A +I+ E+ + PVI+DD KLVG+V+ +
Sbjct: 3 VKDFMTRK--VVYVSPDTTVAHAADIMREQGLRRLPVIEDD-KLVGIVT----------A 49
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGK--MVGDLMTPAPVVVRETTNLEDAARL 202
G+ A+NS P +T + E+ LL+KT + M+ D++T +P ++EDA L
Sbjct: 50 GT-MAENS--PS-KATSLSIYEMNYLLNKTKIRDIMIKDVITVSPF-----ASVEDAIYL 100
Query: 203 LLETKYRRLPV 213
++ K LPV
Sbjct: 101 MMTHKVGVLPV 111
>gi|329889245|ref|ZP_08267588.1| inosine-5'-monophosphate dehydrogenase [Brevundimonas diminuta ATCC
11568]
gi|328844546|gb|EGF94110.1| inosine-5'-monophosphate dehydrogenase [Brevundimonas diminuta ATCC
11568]
Length = 486
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 56/121 (46%), Gaps = 35/121 (28%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVID-DDWKLVGLVSDYDLLALDSISGSGRADNSMFPE 156
V P TT+ E L+I+ K+ITGFPV+D KLVG++++ D M E
Sbjct: 98 VAPDTTLGEVLQIVERKKITGFPVVDPKSGKLVGMLTNRD----------------MRFE 141
Query: 157 VDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVV-VRETTNLEDAARLLLET-KYRRLPVV 214
D K DLMT ++ +RE + +AAR LL T K R+ VV
Sbjct: 142 TDLNLKA----------------ADLMTTGELITLREGSAGREAARELLRTRKIERVIVV 185
Query: 215 D 215
D
Sbjct: 186 D 186
>gi|298345503|ref|YP_003718190.1| putative acetoin dehydrogenase AcuB [Mobiluncus curtisii ATCC
43063]
gi|298235564|gb|ADI66696.1| possible acetoin dehydrogenase AcuB [Mobiluncus curtisii ATCC
43063]
Length = 206
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 55/113 (48%), Gaps = 18/113 (15%)
Query: 103 TVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWK 162
TV +A+E++ IT PV+ D KL G+VS DL N P D+T
Sbjct: 13 TVPDAIELMQTHGITKLPVLRD-GKLCGVVSQLDL-------------NRALPS-DATSL 57
Query: 163 TFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVD 215
+F EV LLSK + +M P + LE+AA L+ +TK LPV+D
Sbjct: 58 SFGEVAYLLSKLK---IYKIMRKNPPTIAPDAMLEEAAILMRDTKVEILPVLD 107
>gi|149204515|ref|ZP_01881481.1| hypothetical protein RTM1035_00335 [Roseovarius sp. TM1035]
gi|149142014|gb|EDM30063.1| hypothetical protein RTM1035_00335 [Roseovarius sp. TM1035]
Length = 231
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 68/132 (51%), Gaps = 9/132 (6%)
Query: 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA-LDSISG 145
D MTT + V +++A+ ++++ I+ PV+D + L GLVS+ DL+ + G
Sbjct: 5 DIMTTS--VISVPLEGQIEDAVRLMLDHNISALPVVDAEGDLKGLVSEGDLMRRVRETDG 62
Query: 146 SGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLE 205
R S + EV +E + K V D+MT V V E TN+ + ARLL +
Sbjct: 63 PRR---SWWLEV---LGGASESAQDFVKLKSHRVEDVMTRDVVSVEEDTNVAEIARLLEK 116
Query: 206 TKYRRLPVVDAD 217
+ +R+PVV +D
Sbjct: 117 HRIKRVPVVRSD 128
>gi|400601710|gb|EJP69335.1| CBS domain-containing protein [Beauveria bassiana ARSEF 2860]
Length = 664
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 55/120 (45%), Gaps = 26/120 (21%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
+KP TTV EA +++ KR V DDD ++ G+ + DL + G+G+
Sbjct: 100 IKPNTTVSEAAQLMAAKREDCVLVTDDDDRIAGIFTAKDLAF--RVVGTGQ--------- 148
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
K++ + ++MT P+ R T+ DA L++ +R LPV+D +
Sbjct: 149 ---------------KSSNVTIAEIMTKNPLCARTDTSATDALDLMVRKGFRHLPVMDEN 193
>gi|260060968|ref|YP_003194048.1| CBS domain-containing protein [Robiginitalea biformata HTCC2501]
gi|88785100|gb|EAR16269.1| CBS domain protein [Robiginitalea biformata HTCC2501]
Length = 172
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 73/173 (42%), Gaps = 41/173 (23%)
Query: 61 RSSAVFASGTLTANSAA-----------PSSGVYT----VGDFMTTKEELHVVKPTTTVD 105
+ + +F + NS A PS Y V D+MT L +P ++
Sbjct: 2 KENTIFKNNLTKYNSMAIKSFQGRRAKDPSKKEYDAPILVSDYMT--RNLVTFRPDQSIL 59
Query: 106 EALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFN 165
E +E RI+G PV+DD+ LVG+VS+ D + IS S + FN
Sbjct: 60 EVMEAFTRHRISGGPVLDDNGFLVGIVSEAD--CMKQISES---------------RYFN 102
Query: 166 EVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADG 218
Q +L K+ V MT + ++ DAA + + RRLPV+ DG
Sbjct: 103 --QPILDKS----VERFMTKEVETIPHDMSIFDAAGVFHKNNRRRLPVM-KDG 148
>gi|336323149|ref|YP_004603116.1| hypothetical protein Flexsi_0886 [Flexistipes sinusarabici DSM
4947]
gi|336106730|gb|AEI14548.1| CBS domain containing membrane protein [Flexistipes sinusarabici
DSM 4947]
Length = 140
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 55/107 (51%), Gaps = 19/107 (17%)
Query: 111 LVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV--DSTWKTFNEVQ 168
L +K +TG PV++ D ++VG+ S+ D+L + P++ D+ +VQ
Sbjct: 29 LRKKNLTGLPVLNKDGEVVGVFSESDVL-------------NQLPDILNDADKIPLVDVQ 75
Query: 169 KLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVD 215
+L + V ++M P+ V NL+D A++ LE R+PVVD
Sbjct: 76 ELTNPP----VKNVMGKPPITVTPEHNLKDVAKIFLENYIHRVPVVD 118
>gi|269837132|ref|YP_003319360.1| putative signal transduction protein with CBS domains
[Sphaerobacter thermophilus DSM 20745]
gi|269786395|gb|ACZ38538.1| putative signal transduction protein with CBS domains
[Sphaerobacter thermophilus DSM 20745]
Length = 161
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 54/130 (41%), Gaps = 36/130 (27%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
TV + MT + V P T VDE +L RI+G PV+D+ L+G+VS++D+++
Sbjct: 9 TVKEIMTPN--VITVFPQTGVDEVARLLYAHRISGMPVVDETGALLGIVSEFDVIS---- 62
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
G+ D+MT + V E E A +L
Sbjct: 63 ------------------------------KKGRTAADIMTRDVISVLEDALAEQVAGIL 92
Query: 204 LETKYRRLPV 213
E RR+PV
Sbjct: 93 TERNVRRVPV 102
>gi|225858564|ref|YP_002740074.1| AcuB family protein [Streptococcus pneumoniae 70585]
gi|225721555|gb|ACO17409.1| AcuB family protein [Streptococcus pneumoniae 70585]
Length = 218
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 67/131 (51%), Gaps = 20/131 (15%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V DFMT K + + P TTV +++ E+ + PVI++D +LVGLV++ +
Sbjct: 3 VKDFMTRK--VVYISPDTTVSHTADLMREQGLHRLPVIEND-QLVGLVTEGTI------- 52
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
+A S +T + E+ LL+KT V D+M V V +LEDA L+L
Sbjct: 53 --AQASPS-----KATSLSIYEMNYLLNKTK---VKDVMIRDVVTVSGYASLEDATYLML 102
Query: 205 ETKYRRLPVVD 215
+ K LPVVD
Sbjct: 103 KNKIGILPVVD 113
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.316 0.131 0.380
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,669,557,831
Number of Sequences: 23463169
Number of extensions: 147338871
Number of successful extensions: 443753
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 2255
Number of HSP's successfully gapped in prelim test: 2395
Number of HSP's that attempted gapping in prelim test: 432775
Number of HSP's gapped (non-prelim): 11452
length of query: 237
length of database: 8,064,228,071
effective HSP length: 138
effective length of query: 99
effective length of database: 9,121,278,045
effective search space: 903006526455
effective search space used: 903006526455
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 74 (33.1 bits)