BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026495
(237 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O23193|CBSX1_ARATH CBS domain-containing protein CBSX1, chloroplastic OS=Arabidopsis
thaliana GN=CBSX1 PE=1 SV=2
Length = 236
Score = 271 bits (692), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 130/157 (82%), Positives = 144/157 (91%)
Query: 62 SSAVFASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPV 121
S++ A TL NS++P SGVYTVG+FMT KE+LHVVKPTTTVDEALE+LVE RITGFPV
Sbjct: 54 SASSAAGSTLMTNSSSPRSGVYTVGEFMTKKEDLHVVKPTTTVDEALELLVENRITGFPV 113
Query: 122 IDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGD 181
ID+DWKLVGLVSDYDLLALDSISGSGR +NSMFPEVDSTWKTFN VQKLLSKTNGK+VGD
Sbjct: 114 IDEDWKLVGLVSDYDLLALDSISGSGRTENSMFPEVDSTWKTFNAVQKLLSKTNGKLVGD 173
Query: 182 LMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADG 218
LMTPAP+VV E TNLEDAA++LLETKYRRLPVVD+DG
Sbjct: 174 LMTPAPLVVEEKTNLEDAAKILLETKYRRLPVVDSDG 210
Score = 37.4 bits (85), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 31/49 (63%), Gaps = 2/49 (4%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVS 133
VGD MT VV+ T +++A +IL+E + PV+D D KLVG+++
Sbjct: 171 VGDLMTPAP--LVVEEKTNLEDAAKILLETKYRRLPVVDSDGKLVGIIT 217
>sp|Q9C5D0|CBSX2_ARATH CBS domain-containing protein CBSX2, chloroplastic OS=Arabidopsis
thaliana GN=CBSX2 PE=1 SV=1
Length = 238
Score = 238 bits (606), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 117/170 (68%), Positives = 142/170 (83%), Gaps = 11/170 (6%)
Query: 60 RRSSAVFASGTLTANSAAPSS-----------GVYTVGDFMTTKEELHVVKPTTTVDEAL 108
RRSS S T++A AAP+S G YTVGDFMT ++ LHVVKP+T+VD+AL
Sbjct: 43 RRSSTFSPSITVSAFFAAPASVNNNNSVPAKNGGYTVGDFMTPRQNLHVVKPSTSVDDAL 102
Query: 109 EILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQ 168
E+LVEK++TG PVIDD+W LVG+VSDYDLLALDSISG + D ++FP+VDSTWKTFNE+Q
Sbjct: 103 ELLVEKKVTGLPVIDDNWTLVGVVSDYDLLALDSISGRSQNDTNLFPDVDSTWKTFNELQ 162
Query: 169 KLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADG 218
KL+SKT GK+VGDLMTP+P+VVR++TNLEDAARLLLETK+RRLPVVDADG
Sbjct: 163 KLISKTYGKVVGDLMTPSPLVVRDSTNLEDAARLLLETKFRRLPVVDADG 212
Score = 36.2 bits (82), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 31/49 (63%), Gaps = 2/49 (4%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVS 133
VGD MT VV+ +T +++A +L+E + PV+D D KL+G+++
Sbjct: 173 VGDLMTPSP--LVVRDSTNLEDAARLLLETKFRRLPVVDADGKLIGILT 219
>sp|Q9UY49|IMDH_PYRAB Inosine-5'-monophosphate dehydrogenase OS=Pyrococcus abyssi (strain
GE5 / Orsay) GN=guaB PE=3 SV=1
Length = 485
Score = 52.0 bits (123), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 61/126 (48%), Gaps = 35/126 (27%)
Query: 93 EELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNS 152
E++ + P TVD AL ++ + I G PV++++ K+VG++S D+ A +
Sbjct: 101 EDVITISPEETVDFALFLMEKHDIDGLPVVENE-KVVGIISKKDIAARE----------- 148
Query: 153 MFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLP 212
GK+V +LMT + V E +E+A ++++E + RLP
Sbjct: 149 -----------------------GKLVKELMTKDVITVPENIEVEEALKIMIENRIDRLP 185
Query: 213 VVDADG 218
VVD +G
Sbjct: 186 VVDKEG 191
Score = 42.4 bits (98), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 40/68 (58%), Gaps = 2/68 (2%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V + MT +++ V V+EAL+I++E RI PV+D + +L+GL++ DL+A
Sbjct: 152 VKELMT--KDVITVPENIEVEEALKIMIENRIDRLPVVDKEGRLIGLITMSDLVARKKYK 209
Query: 145 GSGRADNS 152
+ R +N
Sbjct: 210 NAVRDENG 217
>sp|Q58821|Y1426_METJA Uncharacterized protein MJ1426 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ1426 PE=4 SV=1
Length = 168
Score = 51.6 bits (122), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 74/143 (51%), Gaps = 12/143 (8%)
Query: 86 GDFMTTKEELH---VVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS 142
G+ M K+ + VV + + + + + +I+G PV++ D KLVG++S+ D++ +
Sbjct: 12 GEIMLIKDIMKKPIVVYEDNDLIDVIRLFRKNKISGAPVLNKDGKLVGIISESDIVK--T 69
Query: 143 ISGSGRADNSMFPE----VDSTWKTFNEVQKLLSKTNGKM---VGDLMTPAPVVVRETTN 195
I N + P ++ KT ++++ + + V D+MT +V +
Sbjct: 70 IVTHNEDLNLILPSPLDLIELPLKTALKIEEFMEDLKNALKTKVRDVMTRKVIVAKPDMT 129
Query: 196 LEDAARLLLETKYRRLPVVDADG 218
+ DAA+L+++ +RLPVVD +G
Sbjct: 130 INDAAKLMVKNNIKRLPVVDDEG 152
Score = 39.3 bits (90), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 35/54 (64%), Gaps = 2/54 (3%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 138
V D MT K + V KP T+++A +++V+ I PV+DD+ L+G+V+ DL+
Sbjct: 113 VRDVMTRK--VIVAKPDMTINDAAKLMVKNNIKRLPVVDDEGNLIGIVTRGDLI 164
>sp|O58045|IMDH_PYRHO Inosine-5'-monophosphate dehydrogenase OS=Pyrococcus horikoshii
(strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139
/ OT-3) GN=guaB PE=1 SV=1
Length = 486
Score = 51.2 bits (121), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 61/126 (48%), Gaps = 35/126 (27%)
Query: 93 EELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNS 152
E++ + P TVD AL ++ + I G PV++D+ K+VG+++ D+ A +
Sbjct: 101 EDVITIAPDETVDFALFLMEKHGIDGLPVVEDE-KVVGIITKKDIAARE----------- 148
Query: 153 MFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLP 212
GK+V +LMT + V E+ +E+A ++++E + RLP
Sbjct: 149 -----------------------GKLVKELMTKEVITVPESIEVEEALKIMIENRIDRLP 185
Query: 213 VVDADG 218
VVD G
Sbjct: 186 VVDERG 191
Score = 46.6 bits (109), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 46/84 (54%), Gaps = 3/84 (3%)
Query: 69 GTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKL 128
G +T A G V + MT +E+ V + V+EAL+I++E RI PV+D+ KL
Sbjct: 137 GIITKKDIAAREG-KLVKELMT--KEVITVPESIEVEEALKIMIENRIDRLPVVDERGKL 193
Query: 129 VGLVSDYDLLALDSISGSGRADNS 152
VGL++ DL+A + R +N
Sbjct: 194 VGLITMSDLVARKKYKNAVRDENG 217
>sp|O67820|IMDH_AQUAE Inosine-5'-monophosphate dehydrogenase OS=Aquifex aeolicus (strain
VF5) GN=guaB PE=3 SV=1
Length = 490
Score = 50.8 bits (120), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 61/121 (50%), Gaps = 29/121 (23%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
VKP T V EAL+I+ + +I+G PV+D++ KL+G++++ DL + PE
Sbjct: 103 VKPDTRVKEALDIMAKYKISGVPVVDEERKLIGILTNRDLRFIK-------------PED 149
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
S V + ++K N + AP E L++A + + K +LP+VD +
Sbjct: 150 YS-----KPVSEFMTKEN-------LITAP----EGITLDEAEEIFRKYKIEKLPIVDKE 193
Query: 218 G 218
G
Sbjct: 194 G 194
Score = 37.4 bits (85), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 138
V +FMT KE L T+DEA EI + +I P++D + K+ GL++ D++
Sbjct: 154 VSEFMT-KENLITAPEGITLDEAEEIFRKYKIEKLPIVDKEGKIKGLITIKDIV 206
>sp|P42851|IMDH_PYRFU Inosine-5'-monophosphate dehydrogenase OS=Pyrococcus furiosus
(strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) GN=guaB
PE=3 SV=1
Length = 485
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 62/126 (49%), Gaps = 35/126 (27%)
Query: 93 EELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNS 152
E++ + P T+D AL ++ + I G PV+++D ++VG+++ D+ A +
Sbjct: 101 EDVITIAPDETIDYALFLMEKHGIDGLPVVEED-RVVGIITKKDIAARE----------- 148
Query: 153 MFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLP 212
G+ V +LMT + V E+ ++E+A ++++E + RLP
Sbjct: 149 -----------------------GRTVKELMTREVITVPESVDVEEALKIMMENRIDRLP 185
Query: 213 VVDADG 218
VV+ DG
Sbjct: 186 VVNEDG 191
Score = 47.4 bits (111), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 69 GTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKL 128
G +T A G TV + MT E+ V + V+EAL+I++E RI PV+++D KL
Sbjct: 137 GIITKKDIAAREG-RTVKELMT--REVITVPESVDVEEALKIMMENRIDRLPVVNEDGKL 193
Query: 129 VGLVSDYDLLA 139
VGL++ DL+A
Sbjct: 194 VGLITMSDLVA 204
>sp|P65167|IMDH_MYCTU Inosine-5'-monophosphate dehydrogenase OS=Mycobacterium
tuberculosis GN=guaB PE=1 SV=1
Length = 529
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 53/121 (43%), Gaps = 33/121 (27%)
Query: 99 KPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVD 158
+P T+ + + RI+G PV+DDD LVG++++ D M EVD
Sbjct: 137 RPDNTLAQVDALCARFRISGLPVVDDDGALVGIITNRD----------------MRFEVD 180
Query: 159 STWKTFNEVQKLLSKTNGKMVGDLMTPAPVV-VRETTNLEDAARLLLETKYRRLPVVDAD 217
+ K V ++MT AP++ +E + A LL K +LPVVD
Sbjct: 181 QS----------------KQVAEVMTKAPLITAQEGVSASAALGLLRRNKIEKLPVVDGR 224
Query: 218 G 218
G
Sbjct: 225 G 225
>sp|P65168|IMDH_MYCBO Inosine-5'-monophosphate dehydrogenase OS=Mycobacterium bovis
(strain ATCC BAA-935 / AF2122/97) GN=guaB PE=3 SV=1
Length = 529
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 53/121 (43%), Gaps = 33/121 (27%)
Query: 99 KPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVD 158
+P T+ + + RI+G PV+DDD LVG++++ D M EVD
Sbjct: 137 RPDNTLAQVDALCARFRISGLPVVDDDGALVGIITNRD----------------MRFEVD 180
Query: 159 STWKTFNEVQKLLSKTNGKMVGDLMTPAPVV-VRETTNLEDAARLLLETKYRRLPVVDAD 217
+ K V ++MT AP++ +E + A LL K +LPVVD
Sbjct: 181 QS----------------KQVAEVMTKAPLITAQEGVSASAALGLLRRNKIEKLPVVDGR 224
Query: 218 G 218
G
Sbjct: 225 G 225
>sp|Q58622|Y1225_METJA Uncharacterized protein MJ1225 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ1225 PE=1 SV=1
Length = 280
Score = 44.3 bits (103), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 59/123 (47%), Gaps = 28/123 (22%)
Query: 92 KEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADN 151
+E + +K +DEA+E + K + G P+++D+ +L+ L+++ D++
Sbjct: 91 EENVITLKENADIDEAIETFLTKNVGGAPIVNDENQLISLITERDVI------------R 138
Query: 152 SMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRL 211
++ ++D NEV + D +T +V L+D AR ++ +RRL
Sbjct: 139 ALLDKIDE-----NEV-----------IDDYITRDVIVATPGERLKDVARTMVRNGFRRL 182
Query: 212 PVV 214
PVV
Sbjct: 183 PVV 185
>sp|P54606|YHCV_BACSU CBS domain-containing protein YhcV OS=Bacillus subtilis (strain
168) GN=yhcV PE=4 SV=1
Length = 140
Score = 44.3 bits (103), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 65/136 (47%), Gaps = 30/136 (22%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
+V D MTT ++ V P T+ EA ++ + + PV++ L G+++D D +AL +
Sbjct: 3 SVKDTMTT--QVATVSPNQTIQEAASLMKQHNVGAIPVVEQGV-LKGMLTDRD-IALRT- 57
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
+ GR + EV ST +L++ P +LEDA++L+
Sbjct: 58 TAQGRDGQTPVSEVMST--------------------ELVSGNP-----NMSLEDASQLM 92
Query: 204 LETKYRRLPVVDADGW 219
+ + RRLP+VD +
Sbjct: 93 AQHQIRRLPIVDQNNL 108
>sp|O13965|MUG70_SCHPO Meiotically up-regulated gene 70 protein OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=mug70 PE=1 SV=1
Length = 730
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 51/115 (44%), Gaps = 26/115 (22%)
Query: 104 VDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKT 163
V E +++ KR V+DDD +L G+V+ D+ G+G
Sbjct: 82 VTETAQLMAAKRQNCVLVVDDDEQLAGIVTATDIAT--RCVGAG---------------- 123
Query: 164 FNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADG 218
N Q L + D+M+ +P+ + T +DA L++E K+R LPVV G
Sbjct: 124 LNARQTL--------IADIMSTSPLCITSDTRFDDALLLMIEHKFRHLPVVSDGG 170
>sp|Q9UGJ0|AAKG2_HUMAN 5'-AMP-activated protein kinase subunit gamma-2 OS=Homo sapiens
GN=PRKAG2 PE=1 SV=1
Length = 569
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 31/50 (62%)
Query: 91 TKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLAL 140
T + + P T + +AL I VE+RI+ PV+D+ K+V + S +D++ L
Sbjct: 432 TYHNIAFIHPDTPIIKALNIFVERRISALPVVDESGKVVDIYSKFDVINL 481
>sp|Q91WG5|AAKG2_MOUSE 5'-AMP-activated protein kinase subunit gamma-2 OS=Mus musculus
GN=Prkag2 PE=1 SV=2
Length = 566
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 31/50 (62%)
Query: 91 TKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLAL 140
T + + P T + +AL I VE+RI+ PV+D+ K+V + S +D++ L
Sbjct: 429 TYHNIAFIHPDTPIIKALNIFVERRISALPVVDESGKVVDIYSKFDVINL 478
>sp|Q9KGN8|IMDH_BACHD Inosine-5'-monophosphate dehydrogenase OS=Bacillus halodurans
(strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153
/ C-125) GN=guaB PE=3 SV=1
Length = 485
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 64/140 (45%), Gaps = 40/140 (28%)
Query: 79 SSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 138
SGV T F+T P V +A ++ + RI+G P++D+D KLVG++++ DL
Sbjct: 92 ESGVITNPFFLT---------PDRQVFDAEHLMGKYRISGVPIVDEDQKLVGILTNRDL- 141
Query: 139 ALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLED 198
F E ST + +++K N + APV T L++
Sbjct: 142 --------------RFIEDYSTL-----IDDVMTKEN-------LVTAPV----GTTLKE 171
Query: 199 AARLLLETKYRRLPVVDADG 218
A +L + K +LP+VD G
Sbjct: 172 AEEILQKHKIEKLPLVDESG 191
Score = 34.3 bits (77), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 31/54 (57%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL 137
T+ D + TKE L TT+ EA EIL + +I P++D+ L GL++ D+
Sbjct: 149 TLIDDVMTKENLVTAPVGTTLKEAEEILQKHKIEKLPLVDESGTLKGLITIKDI 202
>sp|Q5R4S0|AAKG2_PONAB 5'-AMP-activated protein kinase subunit gamma-2 OS=Pongo abelii
GN=PRKAG2 PE=2 SV=1
Length = 524
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 31/50 (62%)
Query: 91 TKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLAL 140
T + + P T + +AL I VE+RI+ PV+D+ K+V + S +D++ L
Sbjct: 387 TYHNIAFIHPDTPIIKALNIFVERRISALPVVDESGKVVDIYSKFDVINL 436
>sp|P32987|YBP3_ACIAM Uncharacterized 17.7 kDa protein in bps2 3'region OS=Acidianus
ambivalens PE=4 SV=1
Length = 164
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 62/137 (45%), Gaps = 31/137 (22%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V TTK ++VVKP T+ EA + + E + VID ++VG++++ D++ +
Sbjct: 5 VSQIATTK--VYVVKPNVTIAEAAKEMKEHNLGSLVVIDSQNRVVGIITERDIVK----A 58
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
S R ++DS + + MT V E T + DA ++L
Sbjct: 59 ASNR-------DIDSPVEKY------------------MTKDVKGVTEDTEVTDALDIML 93
Query: 205 ETKYRRLPVVDADGWNY 221
+R LP++ ++G Y
Sbjct: 94 NNGFRHLPIIKSNGKLY 110
>sp|P38697|IMDH2_YEAST Inosine-5'-monophosphate dehydrogenase 2 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=IMD2 PE=1
SV=1
Length = 523
Score = 42.4 bits (98), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 53/125 (42%), Gaps = 35/125 (28%)
Query: 97 VVKPTTTVDEALEILVEKRITGFPVIDD---DWKLVGLVSDYDLLALDSISGSGRADNSM 153
V+ PTTTV EA + + GFPV D + KLVG+++ D+ ++ DNS+
Sbjct: 127 VISPTTTVGEAKSMKEKYGFAGFPVTTDGKRNAKLVGVITSRDIQFVE--------DNSL 178
Query: 154 FPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPV 213
+V D+MT PV + L + +L + K RL V
Sbjct: 179 ------------------------LVQDVMTKNPVTGAQGITLSEGNEILKKIKKGRLLV 214
Query: 214 VDADG 218
VD G
Sbjct: 215 VDEKG 219
>sp|A9A5Y7|IMDH_NITMS Inosine-5'-monophosphate dehydrogenase OS=Nitrosopumilus maritimus
(strain SCM1) GN=guaB PE=3 SV=1
Length = 476
Score = 41.6 bits (96), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 56/126 (44%), Gaps = 33/126 (26%)
Query: 93 EELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNS 152
E + + ++ +AL+ +K I+G V+D + KLVG+V++ DL
Sbjct: 94 ENPYSISSDKSIQDALDYAEDKEISGLLVVDSNSKLVGIVTERDL--------------- 138
Query: 153 MFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLP 212
L + +NG + D+MT V + +L++A +L + + +LP
Sbjct: 139 -----------------LFAGSNG-TIADVMTKDVVTAKPGVSLDEAKDILHKHRIEKLP 180
Query: 213 VVDADG 218
+VD G
Sbjct: 181 IVDDSG 186
Score = 39.7 bits (91), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL 137
T+ D MT +++ KP ++DEA +IL + RI P++DD + GL++ D+
Sbjct: 146 TIADVMT--KDVVTAKPGVSLDEAKDILHKHRIEKLPIVDDSGIIQGLITSKDI 197
>sp|Q54H97|Y8960_DICDI CBS domain-containing protein DDB_G0289609 OS=Dictyostelium
discoideum GN=DDB_G0289609 PE=2 SV=1
Length = 145
Score = 41.2 bits (95), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 54/118 (45%), Gaps = 19/118 (16%)
Query: 102 TTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL-LALDSISGSGRADNSMFPEVDST 160
TT+D AL+ L I PV+D+D L G+++D DL LA DS PE +
Sbjct: 20 TTLDVALKSLNANSIHRLPVVDNDGNLKGIITDRDLRLATDS---------PFLPENNED 70
Query: 161 WKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADG 218
L K V +M PV + + + + +AA+L+ T LPV+D G
Sbjct: 71 R---------LEKLRLHKVSSIMKQNPVTIEDFSPVVEAAKLMRVTNVGGLPVLDKKG 119
>sp|P21879|IMDH_BACSU Inosine-5'-monophosphate dehydrogenase OS=Bacillus subtilis (strain
168) GN=guaB PE=1 SV=2
Length = 488
Score = 41.2 bits (95), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL 137
+ D MT KEEL TT+DEA +IL + +I P++DD KL GL++ D+
Sbjct: 153 ISDVMT-KEELVTASVGTTLDEAEKILQKHKIEKLPLVDDQNKLKGLITIKDI 204
Score = 35.8 bits (81), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 55/119 (46%), Gaps = 35/119 (29%)
Query: 100 PTTTVDEALEILVEKRITGFPVI--DDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
P V +A ++ + RI+G P++ ++D KLVG++++ DL + +D SM
Sbjct: 104 PDHQVFDAEHLMGKYRISGVPIVNNEEDQKLVGIITNRDLRFI--------SDYSM---- 151
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRET-TNLEDAARLLLETKYRRLPVVD 215
+ D+MT +V T L++A ++L + K +LP+VD
Sbjct: 152 --------------------KISDVMTKEELVTASVGTTLDEAEKILQKHKIEKLPLVD 190
>sp|Q59011|IMDH_METJA Inosine-5'-monophosphate dehydrogenase OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=guaB PE=3 SV=1
Length = 496
Score = 40.8 bits (94), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 53/118 (44%), Gaps = 32/118 (27%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P TV EA+ ++ I+G PV+D++ KLVG+++ D+ A++
Sbjct: 103 VSPDDTVGEAINVMETYSISGLPVVDNEDKLVGIITHRDVKAIE---------------- 146
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVD 215
D T K V D+MT V +E E+A L+ + RLP+VD
Sbjct: 147 DKTKK----------------VKDVMTKDVVCAKEDVEEEEALELMYANRVERLPIVD 188
>sp|Q8BGM7|AAKG3_MOUSE 5'-AMP-activated protein kinase subunit gamma-3 OS=Mus musculus
GN=Prkag3 PE=1 SV=1
Length = 489
Score = 40.8 bits (94), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 78 PSSGVYTVGDF-MTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYD 136
PS T+ D + T +L VV T V AL+I V++R++ PV+++ ++VGL S +D
Sbjct: 341 PSFLCRTIQDLGIGTFRDLAVVLETAPVLTALDIFVDRRVSALPVVNESGQVVGLYSRFD 400
Query: 137 LLALDSISGSGRADNSM 153
++ L + D S+
Sbjct: 401 VIHLAAQQTYNHLDMSV 417
>sp|Q9HLK8|IMDH_THEAC Inosine-5'-monophosphate dehydrogenase OS=Thermoplasma acidophilum
(strain ATCC 25905 / DSM 1728 / JCM 9062 / NBRC 15155 /
AMRC-C165) GN=guaB PE=3 SV=1
Length = 485
Score = 40.8 bits (94), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 58/126 (46%), Gaps = 34/126 (26%)
Query: 94 ELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSM 153
+++ + P T ++ A ++ + I G PV+ DD KLVG+V+ DL
Sbjct: 100 DVYTISPETPIEVARTLMATRNIAGLPVVKDD-KLVGIVTKRDL---------------- 142
Query: 154 FPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPV 213
E K S + MV D++T AP E ++++A +L + + +LP+
Sbjct: 143 ------------EFVKKGSSVSDVMVRDVIT-AP----ENVDIDEAIEILHKNRIEKLPL 185
Query: 214 VDADGW 219
VD+ G
Sbjct: 186 VDSSGH 191
Score = 36.6 bits (83), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 24/35 (68%)
Query: 104 VDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 138
+DEA+EIL + RI P++D LVGL++ D++
Sbjct: 168 IDEAIEILHKNRIEKLPLVDSSGHLVGLITAKDII 202
>sp|Q2LL38|AAKG3_BOVIN 5'-AMP-activated protein kinase subunit gamma-3 OS=Bos taurus
GN=PRKAG3 PE=2 SV=2
Length = 497
Score = 40.4 bits (93), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 78 PSSGVYTVGDF-MTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYD 136
PS T+ D + T +L VV T + AL+I V++R++ PVI++ ++VGL S +D
Sbjct: 349 PSFLYRTIQDLGIGTFRDLAVVLETAPILTALDIFVDRRVSALPVINEAGQVVGLYSRFD 408
Query: 137 LLALDSISGSGRADNSM 153
++ L + D S+
Sbjct: 409 VIHLAAQQTYNHLDISV 425
>sp|Q49729|IMDH_MYCLE Inosine-5'-monophosphate dehydrogenase OS=Mycobacterium leprae
(strain TN) GN=guaB PE=3 SV=1
Length = 529
Score = 40.4 bits (93), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 50/121 (41%), Gaps = 33/121 (27%)
Query: 99 KPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVD 158
+P T+ + + RI+G PV+DD L G++++ D M EVD
Sbjct: 137 RPDNTLAQVGALCARFRISGLPVVDDSGALAGIITNRD----------------MRFEVD 180
Query: 159 STWKTFNEVQKLLSKTNGKMVGDLMTPAPVV-VRETTNLEDAARLLLETKYRRLPVVDAD 217
+ K V ++MT P++ E + + A LL K +LPVVD
Sbjct: 181 QS----------------KQVAEVMTKTPLITAAEGVSADAALGLLRRNKIEKLPVVDGH 224
Query: 218 G 218
G
Sbjct: 225 G 225
>sp|P50094|IMDH4_YEAST Inosine-5'-monophosphate dehydrogenase 4 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=IMD4 PE=1
SV=1
Length = 524
Score = 40.4 bits (93), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 56/125 (44%), Gaps = 35/125 (28%)
Query: 97 VVKPTTTVDEALEILVEKRITGFPVIDDD---WKLVGLVSDYDLLALDSISGSGRADNSM 153
V+ PTTTV E + + +GFPV +D KLVGLV+ D+ L+ D+S+
Sbjct: 128 VISPTTTVGEVKVMKRKFGFSGFPVTEDGKCPGKLVGLVTSRDIQFLE--------DDSL 179
Query: 154 FPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPV 213
+V ++MT PV + L++ +L +TK +L +
Sbjct: 180 ------------------------VVSEVMTKNPVTGIKGITLKEGNEILKQTKKGKLLI 215
Query: 214 VDADG 218
VD +G
Sbjct: 216 VDDNG 220
>sp|Q9LEV3|CBSX3_ARATH CBS domain-containing protein CBSX3, mitochondrial OS=Arabidopsis
thaliana GN=CBSX3 PE=1 SV=1
Length = 206
Score = 40.0 bits (92), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 79 SSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 138
SS VGD MT + +L V P T V A++++ + RI PVI D ++G+VS D++
Sbjct: 126 SSKSTKVGDIMTEENKLITVTPETKVLRAMQLMTDNRIRHIPVIKDK-GMIGMVSIGDVV 184
>sp|Q9UGI9|AAKG3_HUMAN 5'-AMP-activated protein kinase subunit gamma-3 OS=Homo sapiens
GN=PRKAG3 PE=1 SV=3
Length = 489
Score = 40.0 bits (92), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 78 PSSGVYTVGDF-MTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYD 136
PS T+ D + T +L VV T + AL+I V++R++ PV+++ ++VGL S +D
Sbjct: 341 PSFLYRTIQDLGIGTFRDLAVVLETAPILTALDIFVDRRVSALPVVNECGQVVGLYSRFD 400
Query: 137 LLALDSISGSGRADNSM 153
++ L + D S+
Sbjct: 401 VIHLAAQQTYNHLDMSV 417
>sp|Q9MYP4|AAKG3_PIG 5'-AMP-activated protein kinase subunit gamma-3 OS=Sus scrofa
GN=PRKAG3 PE=1 SV=2
Length = 514
Score = 39.7 bits (91), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 78 PSSGVYTVGDF-MTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYD 136
PS T+ D + T +L VV T + AL+I V++R++ PV+++ ++VGL S +D
Sbjct: 366 PSFLYRTIQDLGIGTFRDLAVVLETAPILTALDIFVDRRVSALPVVNETGQVVGLYSRFD 425
Query: 137 LLAL 140
++ L
Sbjct: 426 VIHL 429
>sp|P44334|IMDH_HAEIN Inosine-5'-monophosphate dehydrogenase OS=Haemophilus influenzae
(strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=guaB PE=3
SV=1
Length = 488
Score = 39.3 bits (90), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 32/54 (59%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL 137
TV MT KE+L VK + +E LE++ + R+ V++D +KL G+++ D
Sbjct: 149 TVSQVMTKKEDLVTVKEGASREEILELMHQHRVEKVLVVNDSFKLKGMITVKDF 202
>sp|P39567|IMDH1_YEAST Putative inosine-5'-monophosphate dehydrogenase 1 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=IMD1 PE=5
SV=1
Length = 403
Score = 39.3 bits (90), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 52/125 (41%), Gaps = 35/125 (28%)
Query: 97 VVKPTTTVDEALEILVEKRITGFPVIDD---DWKLVGLVSDYDLLALDSISGSGRADNSM 153
V+ PTTTV EA + + GFPV D + KLVG ++ D+ ++ DNS+
Sbjct: 127 VISPTTTVGEAKSMKEKYGFAGFPVTADGKRNAKLVGAITSRDIQFVE--------DNSL 178
Query: 154 FPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPV 213
+V D+MT PV + L + +L + K RL V
Sbjct: 179 ------------------------LVQDVMTKNPVTGAQGITLSEGNEILKKIKKGRLLV 214
Query: 214 VDADG 218
VD G
Sbjct: 215 VDEKG 219
>sp|Q57647|Y188_METJA Uncharacterized protein MJ0188 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ0188 PE=4 SV=1
Length = 265
Score = 39.3 bits (90), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 63/134 (47%), Gaps = 34/134 (25%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSIS 144
V ++MT K + V TV + +++L E FPV+++ KL+G+VS +D++
Sbjct: 5 VSEYMTKK--VVTVSKDNTVKDVIKLLKETGHNSFPVVEN-GKLIGIVSVHDIV------ 55
Query: 145 GSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLL 204
G+ DN +V+ +++K D++ P N+ D R++
Sbjct: 56 --GKDDNE-------------KVENVMTKRK-----DMVVTTP-----DANIMDVGRIMF 90
Query: 205 ETKYRRLPVVDADG 218
T + +LPVVD +
Sbjct: 91 RTGFSKLPVVDEEN 104
Score = 30.8 bits (68), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 14/54 (25%), Positives = 31/54 (57%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 138
V + MT ++++ V P + + I+ + PV+D++ LVG++S+ D++
Sbjct: 63 VENVMTKRKDMVVTTPDANIMDVGRIMFRTGFSKLPVVDEENNLVGIISNMDVI 116
>sp|Q8G3N6|IMDH_BIFLO Inosine-5'-monophosphate dehydrogenase OS=Bifidobacterium longum
(strain NCC 2705) GN=guaB PE=3 SV=1
Length = 545
Score = 38.9 bits (89), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 58/122 (47%), Gaps = 28/122 (22%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
V P T+ + ++ + I+G PV+D + KLVG++++ D+ + S
Sbjct: 145 VNPEVTLADLDKLCGKFHISGLPVVDKENKLVGIITNRDMRFIAS--------------- 189
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
+ T +V+ +++K N + P + + +DA RLL + K +LP+VD +
Sbjct: 190 -EDYDTL-KVKDVMTKEN-------LVTGPSNISK----DDAHRLLAQHKVEKLPLVDEE 236
Query: 218 GW 219
G
Sbjct: 237 GH 238
>sp|Q9L6B7|IMDH_PASMU Inosine-5'-monophosphate dehydrogenase OS=Pasteurella multocida
(strain Pm70) GN=guaB PE=3 SV=1
Length = 487
Score = 38.9 bits (89), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Query: 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVS--DY 135
TV DFMT K L VK + DE ++ R+ V+ DD+KL G+++ DY
Sbjct: 148 TVADFMTPKARLVTVKRNASRDEIFGLMHTHRVEKVLVVSDDFKLKGMITLKDY 201
Score = 33.1 bits (74), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 24/39 (61%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYD 136
V PT ++ E E++ + FPV+DD+ LVG+++ D
Sbjct: 100 VSPTLSLAELSELVKKNGFASFPVVDDEKNLVGIITGRD 138
>sp|P56088|IMDH_HELPY Inosine-5'-monophosphate dehydrogenase OS=Helicobacter pylori
(strain ATCC 700392 / 26695) GN=guaB PE=3 SV=1
Length = 481
Score = 38.5 bits (88), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 47/104 (45%), Gaps = 33/104 (31%)
Query: 115 RITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKT 174
+I+G PV+DD L+G++++ D+ +S
Sbjct: 116 KISGVPVVDDKGLLIGILTNRDVRFETDLS------------------------------ 145
Query: 175 NGKMVGDLMTPAPVVVRET-TNLEDAARLLLETKYRRLPVVDAD 217
K VGD+MT P+V +L++A+ L+ + K +LP+VD D
Sbjct: 146 --KKVGDVMTKMPLVTAHVGISLDEASDLMHKHKIEKLPIVDKD 187
Score = 30.8 bits (68), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL 137
VGD MT K L ++DEA +++ + +I P++D D L GL++ D+
Sbjct: 148 VGDVMT-KMPLVTAHVGISLDEASDLMHKHKIEKLPIVDKDNVLKGLITIKDI 199
>sp|Q9ZL14|IMDH_HELPJ Inosine-5'-monophosphate dehydrogenase OS=Helicobacter pylori
(strain J99) GN=guaB PE=3 SV=1
Length = 481
Score = 38.1 bits (87), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 47/104 (45%), Gaps = 33/104 (31%)
Query: 115 RITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKT 174
+I+G PV+DD L+G++++ D+ +S
Sbjct: 116 KISGVPVVDDKGLLIGILTNRDVRFETDLS------------------------------ 145
Query: 175 NGKMVGDLMTPAPVVVRET-TNLEDAARLLLETKYRRLPVVDAD 217
K VGD+MT P+V +L++A+ L+ + K +LP+VD D
Sbjct: 146 --KKVGDVMTKMPLVTAHVGISLDEASDLMHKHKIEKLPIVDKD 187
Score = 30.8 bits (68), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL 137
VGD MT K L ++DEA +++ + +I P++D D L GL++ D+
Sbjct: 148 VGDVMT-KMPLVTAHVGISLDEASDLMHKHKIEKLPIVDKDNVLKGLITIKDI 199
>sp|Q0WD32|IMDH_YERPE Inosine-5'-monophosphate dehydrogenase OS=Yersinia pestis GN=guaB
PE=3 SV=1
Length = 487
Score = 38.1 bits (87), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 27/44 (61%)
Query: 94 ELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL 137
E V PTTT+ + E+ G+PV+ +D++LVG+++ D+
Sbjct: 96 EPQTVTPTTTLRQVKELTARNGFAGYPVVTEDYELVGIITGRDV 139
Score = 33.9 bits (76), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 27/49 (55%)
Query: 89 MTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL 137
MT KE L VK T + L+ + EKR+ V+DD + L G+++ D
Sbjct: 153 MTPKERLVTVKEGETREVVLQKMHEKRVEKVLVVDDSFHLRGMITVKDF 201
>sp|O34682|YLBB_BACSU Uncharacterized protein YlbB OS=Bacillus subtilis (strain 168)
GN=ylbB PE=4 SV=2
Length = 148
Score = 37.7 bits (86), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 56/130 (43%), Gaps = 30/130 (23%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWK-LVGLVSDYDLLALDSI 143
+ D MT +L V EA + + + PV+D+D + LVG+V+D DL+ L I
Sbjct: 4 IKDLMTA--DLQYCTVLDNVYEAAVKMKDANVGAIPVVDEDGETLVGIVTDRDLV-LRGI 60
Query: 144 SGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLL 203
+ + K N + + D MT PV V E ++++ L+
Sbjct: 61 A--------------------------IKKPNSQKITDAMTEKPVSVEEDASVDEVLHLM 94
Query: 204 LETKYRRLPV 213
+ RR+PV
Sbjct: 95 ASHQLRRIPV 104
>sp|P50100|Y525_METKA Uncharacterized protein MK0525 OS=Methanopyrus kandleri (strain
AV19 / DSM 6324 / JCM 9639 / NBRC 100938) GN=MK0525 PE=4
SV=2
Length = 196
Score = 37.7 bits (86), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 32/44 (72%)
Query: 98 VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALD 141
V+ V+EA++++V+K I P++DD+ KL+G+V+ D+L ++
Sbjct: 83 VEEDMEVNEAVKLMVDKGIRRLPIVDDNGKLIGIVTMQDILQVE 126
Score = 32.7 bits (73), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 24/38 (63%)
Query: 181 DLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADG 218
D+M+ + V E + +A +L+++ RRLP+VD +G
Sbjct: 74 DIMSQPVITVEEDMEVNEAVKLMVDKGIRRLPIVDDNG 111
>sp|P15889|YR33_THEPE Uncharacterized 33.4 kDa protein in ribosomal RNA operon
OS=Thermofilum pendens PE=4 SV=1
Length = 300
Score = 36.6 bits (83), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 52/112 (46%), Gaps = 29/112 (25%)
Query: 106 EALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFN 165
E +E++VE+ I V+D+D ++VG+VS+ ++ S+ V++ K
Sbjct: 104 EVIELMVERGIGALAVVDEDLRVVGIVSERHVI-------------SLLANVETHVK--- 147
Query: 166 EVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217
V ++MT V + +L + R++ E + RRLP+V +
Sbjct: 148 -------------VKEIMTSEVVYLSPMDSLFEGMRVMSERRIRRLPLVSGE 186
>sp|Q58629|Y1232_METJA Uncharacterized protein MJ1232 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ1232 PE=4 SV=1
Length = 296
Score = 36.6 bits (83), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 38/63 (60%), Gaps = 6/63 (9%)
Query: 75 SAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSD 134
S+ P+ V VG +E+ + P T+ E ++ EK I+G PV+D+D KLVG++S
Sbjct: 165 SSIPNIKVGDVG-----IKEVWTINPNCTLRETAKLFAEKYISGAPVVDND-KLVGVISL 218
Query: 135 YDL 137
+D+
Sbjct: 219 HDI 221
>sp|O67500|Y1546_AQUAE Uncharacterized phosphosugar isomerase aq_1546 OS=Aquifex aeolicus
(strain VF5) GN=aq_1546 PE=3 SV=1
Length = 322
Score = 36.6 bits (83), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 32/53 (60%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL 137
V D T EE+ +VK T++ EA+ + K V++++ KLVG+++D DL
Sbjct: 199 VKDLYHTGEEVPIVKEDTSMKEAIIEMTAKGFGATAVVNEEGKLVGIITDGDL 251
>sp|P46794|CBS_DICDI Cystathionine beta-synthase OS=Dictyostelium discoideum GN=cysB
PE=2 SV=2
Length = 498
Score = 36.6 bits (83), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Query: 157 VDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVV 214
VD +KT ++ ++ K +G V DL P P+ + TT A +LL + + +LPVV
Sbjct: 350 VDPEYKTKDQQEE--EKYHGATVKDLTLPKPITISATTTCAAAVQLLQQYGFDQLPVV 405
>sp|P50097|IMDH_TRIFO Inosine-5'-monophosphate dehydrogenase OS=Tritrichomonas foetus
GN=IMPDH PE=1 SV=1
Length = 503
Score = 36.2 bits (82), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Query: 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLV--SDYD 136
V D MT +L T + EA +I+ EK++ P+IDDD L +V DYD
Sbjct: 163 VSDMMTPFSKLVTAHQDTKLSEANKIIWEKKLNALPIIDDDQHLRYIVFRKDYD 216
>sp|Q8CMQ7|IMDH_STAES Inosine-5'-monophosphate dehydrogenase OS=Staphylococcus
epidermidis (strain ATCC 12228) GN=guaB PE=3 SV=1
Length = 488
Score = 36.2 bits (82), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 54/118 (45%), Gaps = 33/118 (27%)
Query: 100 PTTTVDEALEILVEKRITGFPVID--DDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
P +V EA ++ + RI+G P++D +D KL+G++++ DL ++ S
Sbjct: 104 PEESVYEAEALMGKYRISGVPIVDNQEDRKLIGILTNRDLRFIEDFS------------- 150
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVD 215
K + M D + APV T L++A +L + K +LP+V+
Sbjct: 151 --------------IKISDVMTKDNLITAPV----GTTLDEAEAILQKHKIEKLPLVE 190
>sp|Q5HRX2|IMDH_STAEQ Inosine-5'-monophosphate dehydrogenase OS=Staphylococcus
epidermidis (strain ATCC 35984 / RP62A) GN=guaB PE=3
SV=1
Length = 488
Score = 36.2 bits (82), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 54/118 (45%), Gaps = 33/118 (27%)
Query: 100 PTTTVDEALEILVEKRITGFPVID--DDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157
P +V EA ++ + RI+G P++D +D KL+G++++ DL ++ S
Sbjct: 104 PEESVYEAEALMGKYRISGVPIVDNQEDRKLIGILTNRDLRFIEDFS------------- 150
Query: 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVD 215
K + M D + APV T L++A +L + K +LP+V+
Sbjct: 151 --------------IKISDVMTKDNLITAPV----GTTLDEAEAILQKHKIEKLPLVE 190
>sp|Q09138|AAKG1_PIG 5'-AMP-activated protein kinase subunit gamma-1 OS=Sus scrofa
GN=PRKAG1 PE=1 SV=2
Length = 330
Score = 36.2 bits (82), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 60/140 (42%), Gaps = 29/140 (20%)
Query: 87 DFMT-TKEELHV--------VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL 137
+FM+ + EEL + V+ TT V AL I V+ R++ PV+D+ ++V + S +D+
Sbjct: 187 EFMSKSLEELQIGTYANIAMVRTTTPVYVALGIFVQHRVSALPVVDEKGRVVDIYSKFDV 246
Query: 138 LALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLE 197
+ L + D S+ + F V K + ET LE
Sbjct: 247 INLAAEKTYNNLDVSVTKALQHRSHYFEGVLK------------------CYLHET--LE 286
Query: 198 DAARLLLETKYRRLPVVDAD 217
L+E + RL VVD +
Sbjct: 287 TIINRLVEAEVHRLVVVDEN 306
>sp|P80385|AAKG1_RAT 5'-AMP-activated protein kinase subunit gamma-1 OS=Rattus
norvegicus GN=Prkag1 PE=1 SV=3
Length = 330
Score = 36.2 bits (82), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (58%), Gaps = 9/63 (14%)
Query: 87 DFMT-TKEELHV--------VKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL 137
+FM+ + EEL + V+ TT V AL I V+ R++ PV+D+ ++V + S +D+
Sbjct: 186 EFMSKSLEELQIGTYANIAMVRTTTPVYVALGIFVQHRVSALPVVDEKGRVVDIYSKFDV 245
Query: 138 LAL 140
+ L
Sbjct: 246 INL 248
>sp|P12904|AAKG_YEAST 5'-AMP-activated protein kinase subunit gamma OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=SNF4 PE=1
SV=1
Length = 322
Score = 36.2 bits (82), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 40/70 (57%), Gaps = 3/70 (4%)
Query: 85 VGDF-MTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSI 143
+GD + T++ + + TT V + +++L + R++ P+ID++ L+ + YD+L L I
Sbjct: 188 IGDLNIITQDNMKSCQMTTPVIDVIQMLTQGRVSSVPIIDENGYLINVYEAYDVLGL--I 245
Query: 144 SGSGRADNSM 153
G D S+
Sbjct: 246 KGGIYNDLSL 255
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.131 0.380
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 86,106,833
Number of Sequences: 539616
Number of extensions: 3448094
Number of successful extensions: 9357
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 95
Number of HSP's successfully gapped in prelim test: 57
Number of HSP's that attempted gapping in prelim test: 9080
Number of HSP's gapped (non-prelim): 327
length of query: 237
length of database: 191,569,459
effective HSP length: 114
effective length of query: 123
effective length of database: 130,053,235
effective search space: 15996547905
effective search space used: 15996547905
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 59 (27.3 bits)