Query 026495
Match_columns 237
No_of_seqs 268 out of 1707
Neff 8.9
Searched_HMMs 29240
Date Mon Mar 25 14:56:14 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026495.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/026495hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4esy_A CBS domain containing m 99.9 3.9E-22 1.3E-26 155.2 9.2 141 80-228 15-155 (170)
2 3sl7_A CBS domain-containing p 99.9 6.7E-22 2.3E-26 154.5 10.3 147 82-228 3-149 (180)
3 3lv9_A Putative transporter; C 99.9 1.4E-20 4.8E-25 142.9 14.0 120 78-228 18-138 (148)
4 3nqr_A Magnesium and cobalt ef 99.8 8.6E-21 2.9E-25 140.5 11.3 117 82-228 2-119 (127)
5 3jtf_A Magnesium and cobalt ef 99.8 1.3E-20 4.5E-25 139.9 12.2 116 81-228 3-119 (129)
6 3lfr_A Putative metal ION tran 99.8 1.1E-20 3.8E-25 141.7 11.8 118 82-228 2-120 (136)
7 3i8n_A Uncharacterized protein 99.8 5.9E-21 2E-25 141.9 10.0 119 80-228 3-122 (130)
8 3k6e_A CBS domain protein; str 99.8 3.9E-21 1.3E-25 147.9 8.9 121 83-228 15-135 (156)
9 3lhh_A CBS domain protein; str 99.8 3.1E-20 1.1E-24 144.8 13.5 121 77-228 36-157 (172)
10 4gqw_A CBS domain-containing p 99.8 1.8E-20 6E-25 142.2 11.4 134 81-228 3-136 (152)
11 3hf7_A Uncharacterized CBS-dom 99.8 1.6E-20 5.5E-25 139.8 9.8 118 83-228 2-120 (130)
12 3kpb_A Uncharacterized protein 99.8 2.8E-20 9.7E-25 136.2 10.7 112 84-228 2-113 (122)
13 3gby_A Uncharacterized protein 99.8 4.5E-20 1.5E-24 136.7 10.6 117 81-228 3-119 (128)
14 3oi8_A Uncharacterized protein 99.8 5.9E-20 2E-24 140.9 11.2 119 79-228 34-153 (156)
15 3fhm_A Uncharacterized protein 99.8 5.8E-20 2E-24 142.1 10.9 125 77-228 18-143 (165)
16 2ef7_A Hypothetical protein ST 99.8 1.6E-19 5.6E-24 134.2 12.1 117 81-228 2-118 (133)
17 3oco_A Hemolysin-like protein 99.8 5.6E-20 1.9E-24 140.5 9.6 118 80-228 17-136 (153)
18 2rih_A Conserved protein with 99.8 2.6E-19 8.9E-24 134.7 12.9 116 82-228 4-121 (141)
19 3lqn_A CBS domain protein; csg 99.8 9.9E-20 3.4E-24 138.3 10.4 125 80-228 12-136 (150)
20 2yzi_A Hypothetical protein PH 99.8 3.9E-19 1.3E-23 133.0 13.4 119 79-228 3-122 (138)
21 3ocm_A Putative membrane prote 99.8 2.4E-19 8.3E-24 140.1 11.8 118 79-228 32-150 (173)
22 3k2v_A Putative D-arabinose 5- 99.8 3.9E-19 1.3E-23 135.1 12.2 118 83-228 28-145 (149)
23 3kxr_A Magnesium transporter, 99.8 5.2E-19 1.8E-23 141.9 13.6 114 80-228 51-167 (205)
24 2p9m_A Hypothetical protein MJ 99.8 2.8E-19 9.5E-24 133.7 10.7 119 80-228 5-129 (138)
25 3fv6_A YQZB protein; CBS domai 99.8 5.2E-19 1.8E-23 135.9 11.4 120 79-228 13-137 (159)
26 1pbj_A Hypothetical protein; s 99.8 5.4E-19 1.8E-23 129.8 11.0 115 83-228 1-115 (125)
27 1pvm_A Conserved hypothetical 99.8 1.5E-18 5E-23 136.6 13.7 119 82-228 8-126 (184)
28 2rc3_A CBS domain; in SITU pro 99.8 7.2E-19 2.5E-23 131.2 11.3 117 84-228 7-124 (135)
29 3ctu_A CBS domain protein; str 99.8 8.1E-19 2.8E-23 134.2 11.3 123 81-228 13-135 (156)
30 1y5h_A Hypothetical protein RV 99.8 5.2E-19 1.8E-23 131.5 9.5 118 81-228 6-124 (133)
31 2o16_A Acetoin utilization pro 99.8 9.5E-19 3.3E-23 134.6 11.2 126 81-228 3-128 (160)
32 2emq_A Hypothetical conserved 99.8 1.2E-18 4.1E-23 133.2 11.6 126 79-228 7-132 (157)
33 1o50_A CBS domain-containing p 99.8 1.7E-18 5.7E-23 132.7 11.6 136 77-228 10-146 (157)
34 2uv4_A 5'-AMP-activated protei 99.8 3E-18 1E-22 130.6 11.4 122 77-228 17-144 (152)
35 2nyc_A Nuclear protein SNF4; b 99.8 2.7E-18 9.1E-23 129.0 10.5 119 82-228 7-134 (144)
36 1vr9_A CBS domain protein/ACT 99.8 6.4E-18 2.2E-22 136.2 13.1 113 81-228 11-123 (213)
37 3ddj_A CBS domain-containing p 99.8 6.8E-18 2.3E-22 142.0 13.7 177 29-228 99-278 (296)
38 1yav_A Hypothetical protein BS 99.8 1.7E-18 5.8E-23 132.9 9.1 126 79-228 10-135 (159)
39 4fry_A Putative signal-transdu 99.8 4.5E-18 1.5E-22 130.1 10.3 118 83-228 7-128 (157)
40 2j9l_A Chloride channel protei 99.7 6.7E-18 2.3E-22 132.3 11.1 142 80-228 8-158 (185)
41 2pfi_A Chloride channel protei 99.7 6.9E-18 2.4E-22 129.6 10.0 123 80-228 10-140 (164)
42 2oux_A Magnesium transporter; 99.7 9.3E-18 3.2E-22 141.2 11.3 115 79-228 133-252 (286)
43 3l2b_A Probable manganase-depe 99.7 1.8E-17 6E-22 136.1 12.4 143 82-229 6-238 (245)
44 2yvy_A MGTE, Mg2+ transporter 99.7 2.4E-17 8.2E-22 138.1 13.0 113 81-228 133-250 (278)
45 3ddj_A CBS domain-containing p 99.7 8.5E-17 2.9E-21 135.2 15.8 168 29-228 26-207 (296)
46 2d4z_A Chloride channel protei 99.7 4.6E-17 1.6E-21 134.2 13.0 147 79-228 9-239 (250)
47 2yzq_A Putative uncharacterize 99.7 7E-17 2.4E-21 134.6 14.3 195 32-228 69-272 (282)
48 3kh5_A Protein MJ1225; AMPK, A 99.7 2.9E-17 1E-21 136.5 11.5 180 29-228 90-274 (280)
49 2yzq_A Putative uncharacterize 99.7 2.3E-16 8E-21 131.4 15.4 120 81-229 58-178 (282)
50 3kh5_A Protein MJ1225; AMPK, A 99.7 1.8E-16 6E-21 131.7 13.9 116 82-228 83-198 (280)
51 3t4n_C Nuclear protein SNF4; C 99.7 8.4E-17 2.9E-21 136.9 11.8 120 81-228 185-313 (323)
52 3org_A CMCLC; transporter, tra 99.7 4.7E-17 1.6E-21 150.7 9.7 148 80-229 450-619 (632)
53 2zy9_A Mg2+ transporter MGTE; 99.7 2.2E-16 7.5E-21 141.5 12.0 115 79-228 151-270 (473)
54 2qrd_G Protein C1556.08C; AMPK 99.6 9E-16 3.1E-20 131.1 11.9 119 82-228 181-308 (334)
55 2v8q_E 5'-AMP-activated protei 99.6 2.4E-15 8.2E-20 128.3 12.0 109 94-228 202-316 (330)
56 3pc3_A CG1753, isoform A; CBS, 99.6 7.9E-16 2.7E-20 139.7 9.1 118 80-228 381-504 (527)
57 3usb_A Inosine-5'-monophosphat 99.6 2.5E-15 8.5E-20 135.6 10.5 111 84-228 114-227 (511)
58 4fxs_A Inosine-5'-monophosphat 99.6 1.1E-15 3.8E-20 137.4 4.9 165 23-229 34-203 (496)
59 3t4n_C Nuclear protein SNF4; C 99.6 2E-14 7E-19 122.1 11.7 116 87-228 118-241 (323)
60 2v8q_E 5'-AMP-activated protei 99.6 2.7E-14 9.3E-19 121.7 12.3 121 86-229 121-245 (330)
61 1zfj_A Inosine monophosphate d 99.5 2.4E-14 8.3E-19 128.9 12.0 111 84-228 91-204 (491)
62 2qrd_G Protein C1556.08C; AMPK 99.5 5.5E-14 1.9E-18 120.0 10.3 138 81-228 20-165 (334)
63 1vrd_A Inosine-5'-monophosphat 99.5 1.4E-15 4.9E-20 137.0 -0.1 111 84-228 96-208 (494)
64 4avf_A Inosine-5'-monophosphat 99.5 1.9E-15 6.4E-20 135.8 -0.1 168 19-229 29-201 (490)
65 1me8_A Inosine-5'-monophosphat 99.5 2.8E-15 9.5E-20 135.3 -0.3 112 85-229 98-215 (503)
66 4af0_A Inosine-5'-monophosphat 99.5 6.7E-15 2.3E-19 130.8 0.1 159 27-229 87-252 (556)
67 1jcn_A Inosine monophosphate d 99.4 7.3E-15 2.5E-19 133.0 -1.9 113 84-228 109-226 (514)
68 2cu0_A Inosine-5'-monophosphat 99.3 1.1E-13 3.9E-18 124.4 -0.1 107 85-228 95-201 (486)
69 1vr9_A CBS domain protein/ACT 99.3 1.3E-11 4.4E-16 99.1 11.5 160 19-216 9-172 (213)
70 3ghd_A A cystathionine beta-sy 99.2 4E-11 1.4E-15 79.2 7.2 69 95-190 2-70 (70)
71 3l2b_A Probable manganase-depe 99.2 2.6E-11 8.9E-16 99.1 5.7 106 24-140 132-241 (245)
72 3nqr_A Magnesium and cobalt ef 99.0 1.7E-09 5.8E-14 79.1 10.1 105 33-140 15-123 (127)
73 3gby_A Uncharacterized protein 99.0 1.2E-09 4.1E-14 80.0 8.3 112 27-140 9-123 (128)
74 3fio_A A cystathionine beta-sy 99.0 1.1E-09 3.8E-14 71.6 7.3 46 95-141 2-47 (70)
75 3lfr_A Putative metal ION tran 99.0 3.1E-09 1.1E-13 78.8 9.7 105 33-140 15-124 (136)
76 3jtf_A Magnesium and cobalt ef 99.0 3.7E-09 1.3E-13 77.6 9.8 104 32-140 16-123 (129)
77 4esy_A CBS domain containing m 98.9 4.2E-09 1.4E-13 81.1 9.8 57 82-141 104-160 (170)
78 3kpb_A Uncharacterized protein 98.9 3.1E-09 1E-13 76.9 7.3 108 30-141 8-118 (122)
79 3i8n_A Uncharacterized protein 98.9 3.3E-09 1.1E-13 77.9 7.5 94 44-140 29-126 (130)
80 2ef7_A Hypothetical protein ST 98.9 6.6E-09 2.3E-13 76.3 8.7 111 28-140 9-122 (133)
81 3lhh_A CBS domain protein; str 98.9 7.1E-09 2.4E-13 80.0 8.9 107 31-141 52-162 (172)
82 2rih_A Conserved protein with 98.9 1E-08 3.6E-13 76.1 9.5 111 27-140 9-125 (141)
83 3oi8_A Uncharacterized protein 98.9 8.9E-09 3E-13 78.2 9.2 103 32-138 49-155 (156)
84 3lv9_A Putative transporter; C 98.9 4.6E-09 1.6E-13 78.8 7.5 105 32-140 34-142 (148)
85 1pvm_A Conserved hypothetical 98.9 1.4E-08 4.9E-13 79.1 10.2 113 26-140 12-130 (184)
86 3hf7_A Uncharacterized CBS-dom 98.9 6.2E-09 2.1E-13 76.6 7.6 106 32-140 13-124 (130)
87 3kxr_A Magnesium transporter, 98.9 1.9E-08 6.7E-13 80.1 10.9 111 27-141 58-172 (205)
88 4gqw_A CBS domain-containing p 98.8 1.2E-08 4E-13 76.4 8.2 60 80-141 82-141 (152)
89 1pbj_A Hypothetical protein; s 98.8 1.3E-08 4.4E-13 73.8 7.3 110 29-141 7-120 (125)
90 3k6e_A CBS domain protein; str 98.8 5.5E-09 1.9E-13 79.6 5.1 105 32-140 26-139 (156)
91 2p9m_A Hypothetical protein MJ 98.8 1.7E-08 5.8E-13 74.5 7.3 111 28-140 13-133 (138)
92 3oco_A Hemolysin-like protein 98.8 1.3E-08 4.3E-13 77.0 6.5 106 32-141 31-141 (153)
93 4fry_A Putative signal-transdu 98.8 2.1E-08 7.3E-13 75.8 7.6 106 33-141 23-133 (157)
94 2rc3_A CBS domain; in SITU pro 98.7 2.4E-08 8.2E-13 73.5 7.5 107 31-140 17-128 (135)
95 3sl7_A CBS domain-containing p 98.7 1.7E-08 5.8E-13 77.8 6.8 58 81-140 96-153 (180)
96 2uv4_A 5'-AMP-activated protei 98.7 4E-08 1.4E-12 74.0 8.6 106 33-140 31-148 (152)
97 3k2v_A Putative D-arabinose 5- 98.7 4.3E-08 1.5E-12 73.6 8.7 110 27-139 32-148 (149)
98 2yzi_A Hypothetical protein PH 98.7 8.5E-08 2.9E-12 70.7 10.0 111 28-141 12-127 (138)
99 1o50_A CBS domain-containing p 98.7 2.3E-08 7.8E-13 75.8 6.6 58 80-140 93-150 (157)
100 1y5h_A Hypothetical protein RV 98.7 3.4E-08 1.1E-12 72.5 7.1 110 28-140 13-128 (133)
101 2o16_A Acetoin utilization pro 98.7 6.1E-08 2.1E-12 73.7 7.9 58 80-140 75-132 (160)
102 3lqn_A CBS domain protein; csg 98.7 6.7E-08 2.3E-12 72.4 8.0 56 81-140 85-140 (150)
103 3fhm_A Uncharacterized protein 98.7 4E-08 1.4E-12 75.1 6.5 107 32-141 36-148 (165)
104 3fv6_A YQZB protein; CBS domai 98.6 8.5E-08 2.9E-12 72.8 8.0 98 43-140 36-141 (159)
105 2oux_A Magnesium transporter; 98.6 1.2E-07 4.3E-12 79.2 9.4 110 27-140 141-256 (286)
106 2yvy_A MGTE, Mg2+ transporter 98.6 1.1E-07 3.9E-12 79.0 8.6 109 27-141 139-255 (278)
107 3ocm_A Putative membrane prote 98.6 7.4E-08 2.5E-12 74.5 6.8 105 32-141 47-155 (173)
108 2nyc_A Nuclear protein SNF4; b 98.6 7.7E-08 2.6E-12 71.3 6.0 98 43-140 31-138 (144)
109 2emq_A Hypothetical conserved 98.6 1.4E-07 4.8E-12 71.1 7.3 57 81-141 81-137 (157)
110 3usb_A Inosine-5'-monophosphat 98.6 1.2E-06 4E-11 79.0 14.1 94 44-141 134-232 (511)
111 1yav_A Hypothetical protein BS 98.5 1.2E-07 4.2E-12 71.8 6.4 106 32-141 25-140 (159)
112 3ctu_A CBS domain protein; str 98.5 9.7E-08 3.3E-12 72.1 5.5 56 82-141 85-140 (156)
113 3ghd_A A cystathionine beta-sy 98.5 1.7E-07 5.8E-12 61.5 5.5 41 187-228 2-42 (70)
114 2pfi_A Chloride channel protei 98.5 1.7E-07 5.7E-12 71.0 6.3 111 27-140 17-144 (164)
115 2j9l_A Chloride channel protei 98.4 3.6E-07 1.2E-11 70.7 6.7 59 80-141 105-163 (185)
116 1me8_A Inosine-5'-monophosphat 98.4 1.6E-07 5.6E-12 84.5 5.0 61 81-141 159-219 (503)
117 2d4z_A Chloride channel protei 98.3 6.8E-07 2.3E-11 73.3 6.2 53 176-228 12-66 (250)
118 3fio_A A cystathionine beta-sy 98.3 9E-07 3.1E-11 57.4 5.5 41 187-228 2-42 (70)
119 2zy9_A Mg2+ transporter MGTE; 98.3 6.7E-07 2.3E-11 79.9 6.1 82 53-140 191-274 (473)
120 3org_A CMCLC; transporter, tra 98.1 2.2E-06 7.7E-11 79.2 5.5 54 84-140 569-622 (632)
121 4fxs_A Inosine-5'-monophosphat 98.1 8.6E-07 2.9E-11 79.6 2.3 93 46-141 112-207 (496)
122 4avf_A Inosine-5'-monophosphat 98.1 2.8E-06 9.6E-11 76.2 5.2 62 80-141 144-205 (490)
123 3pc3_A CG1753, isoform A; CBS, 98.1 7.2E-06 2.5E-10 74.2 7.9 113 26-142 387-510 (527)
124 2cu0_A Inosine-5'-monophosphat 98.0 6.9E-06 2.4E-10 73.6 5.6 58 81-140 148-205 (486)
125 1vrd_A Inosine-5'-monophosphat 97.9 9.3E-06 3.2E-10 72.9 5.2 62 81-142 153-214 (494)
126 1zfj_A Inosine monophosphate d 97.9 4.3E-05 1.5E-09 68.5 8.6 61 81-142 150-210 (491)
127 4af0_A Inosine-5'-monophosphat 97.7 6.6E-06 2.3E-10 73.4 0.0 58 81-140 198-255 (556)
128 1jcn_A Inosine monophosphate d 97.5 3.4E-05 1.2E-09 69.6 2.2 62 81-142 171-232 (514)
129 3ka5_A Ribosome-associated pro 62.5 20 0.00068 22.3 5.1 39 192-230 11-50 (65)
130 3k2t_A LMO2511 protein; lister 62.3 17 0.00058 22.0 4.7 39 192-230 11-50 (57)
131 2ioj_A Hypothetical protein AF 52.9 2.7 9.4E-05 30.3 -0.1 46 26-73 67-116 (139)
132 3lyv_A Ribosome-associated fac 52.7 22 0.00076 22.2 4.1 39 192-230 12-51 (66)
133 1tif_A IF3-N, translation init 52.4 20 0.00068 23.2 4.0 26 115-140 12-37 (78)
134 3fan_A Non-structural protein; 46.3 12 0.00041 29.2 2.5 25 207-231 125-149 (213)
135 1svj_A Potassium-transporting 43.9 33 0.0011 25.2 4.7 33 196-229 121-153 (156)
136 1p0z_A Sensor kinase CITA; tra 35.9 27 0.00093 24.3 3.0 21 118-138 105-125 (131)
137 2w5e_A Putative serine proteas 35.7 24 0.00081 26.1 2.7 25 205-229 123-147 (163)
138 1svj_A Potassium-transporting 35.5 29 0.00099 25.5 3.2 34 104-138 121-154 (156)
139 3by8_A Sensor protein DCUS; hi 34.8 28 0.00095 24.7 2.9 21 118-138 110-130 (142)
140 3ka5_A Ribosome-associated pro 33.9 69 0.0024 19.8 4.2 36 100-135 11-46 (65)
141 3k6y_A Serine protease, possib 29.1 40 0.0014 26.1 3.2 24 207-230 181-204 (237)
142 2as9_A Serine protease; trypsi 27.4 46 0.0016 25.2 3.2 24 207-230 156-179 (210)
143 2qkp_A Uncharacterized protein 26.6 38 0.0013 24.3 2.5 21 118-138 110-131 (151)
144 2w7s_A Serine protease SPLA; h 25.8 41 0.0014 25.1 2.7 24 207-230 152-175 (200)
145 3dns_A Ribosomal-protein-alani 25.7 37 0.0013 24.4 2.2 28 210-237 21-48 (135)
146 3tjo_A Serine protease HTRA1; 22.8 47 0.0016 25.8 2.5 21 115-135 187-207 (231)
147 3tjo_A Serine protease HTRA1; 22.8 50 0.0017 25.6 2.6 21 207-227 187-207 (231)
148 3fan_A Non-structural protein; 22.1 49 0.0017 25.7 2.4 27 113-139 123-149 (213)
149 1agj_A Epidermolytic toxin A; 21.5 48 0.0016 25.6 2.3 23 209-231 195-217 (242)
150 3lgi_A Protease DEGS; stress-s 21.1 51 0.0017 25.6 2.4 22 113-134 172-193 (237)
No 1
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=99.87 E-value=3.9e-22 Score=155.20 Aligned_cols=141 Identities=22% Similarity=0.249 Sum_probs=110.5
Q ss_pred CCcccccccccccCceeEEcCCCCHHHHHHHHHHCCCCeEEEEcCCCcEEEEEehHhHhhhccccCCCCCCCCccccccc
Q 026495 80 SGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDS 159 (237)
Q Consensus 80 ~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~ 159 (237)
+..++|+++|++ +++++++++++.+|++.|.+++++.+||+|++|+++|+||.+||++.......... .....
T Consensus 15 l~~~~V~diM~~--~v~~v~~~~tl~~a~~~m~~~~~~~~pVvd~~g~lvGiit~~Dll~~~~~~~~~~~-----~~~~~ 87 (170)
T 4esy_A 15 IRQVPIRDILTS--PVVTVREDDTLDAVAKTMLEHQIGCAPVVDQNGHLVGIITESDFLRGSIPFWIYEA-----SEILS 87 (170)
T ss_dssp HHTSBGGGGCCS--CCCCEETTSBHHHHHHHHHHTTCSEEEEECTTSCEEEEEEGGGGGGGTCCTTHHHH-----HHHHT
T ss_pred HcCCCHHHhcCC--CCcEECCcCcHHHHHHHHHHcCCeEEEEEcCCccEEEEEEHHHHHHHHhhccccch-----hhhhh
Confidence 456799999998 89999999999999999999999999999999999999999999875321110000 00000
Q ss_pred chhhHHHHHHHHHhhcCCccccccccCceEEcCCCCHHHHHHHHHHcCCcEEEEEcCCCcEEEEEEccc
Q 026495 160 TWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGWNYHKRKCSK 228 (237)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~iGvIt~~d 228 (237)
..................+++++|+++++++++++++.+|+++|.+++++++||+| +|+++|+||++|
T Consensus 88 ~~~~~~~~~~~~~~~~~~~v~~im~~~~~tv~~~~~l~~a~~~m~~~~~~~lpVvd-~g~lvGivt~~D 155 (170)
T 4esy_A 88 RAIPAPEVEHLFETGRKLTASAVMTQPVVTAAPEDSVGSIADQMRRHGIHRIPVVQ-DGVPVGIVTRRD 155 (170)
T ss_dssp TTSCHHHHHHHHHHHTTCBHHHHCBCCSCCBCTTSBHHHHHHHHHHTTCSEEEEEE-TTEEEEEEEHHH
T ss_pred hccchhhHHhhhccccccchhhhcccCcccCCcchhHHHHHHHHHHcCCcEEEEEE-CCEEEEEEEHHH
Confidence 00001112223334456789999999999999999999999999999999999998 699999999987
No 2
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=99.86 E-value=6.7e-22 Score=154.49 Aligned_cols=147 Identities=71% Similarity=1.123 Sum_probs=116.3
Q ss_pred cccccccccccCceeEEcCCCCHHHHHHHHHHCCCCeEEEEcCCCcEEEEEehHhHhhhccccCCCCCCCCcccccccch
Q 026495 82 VYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTW 161 (237)
Q Consensus 82 ~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~~~ 161 (237)
.++|+++|.+..+++++.+++++.+|++.|.+++++.+||+|++|+++|+||.+||+++....+.......+++...+.|
T Consensus 3 ~~~v~dim~~~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~~~ 82 (180)
T 3sl7_A 3 GYTVGDFMTPRQNLHVVKPSTSVDDALELLVEKKVTGLPVIDDNWTLVGVVSDYDLLALDSISGRSQNDTNLFPDVDSTW 82 (180)
T ss_dssp CCBHHHHSEEGGGCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHTCC-------------------CC
T ss_pred ceeHHHhcCCCCCceeeCCCCcHHHHHHHHHHcCCCeEEEECCCCeEEEEEEHHHHHhhhhhccccCCcccccccccchh
Confidence 45889999875568899999999999999999999999999988999999999999975443333333334455666777
Q ss_pred hhHHHHHHHHHhhcCCccccccccCceEEcCCCCHHHHHHHHHHcCCcEEEEEcCCCcEEEEEEccc
Q 026495 162 KTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGWNYHKRKCSK 228 (237)
Q Consensus 162 ~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~iGvIt~~d 228 (237)
..+.+....+......++.++|.++++++.+++++.+|+++|.+++++.+||+|++|+++|+||++|
T Consensus 83 ~~~~~~~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~vGiit~~d 149 (180)
T 3sl7_A 83 KTFNELQKLISKTYGKVVGDLMTPSPLVVRDSTNLEDAARLLLETKFRRLPVVDADGKLIGILTRGN 149 (180)
T ss_dssp CSHHHHHHHHHTTTTCBHHHHSEESCCCEETTSBHHHHHHHHTTSTTCEEEEECTTCBEEEEEEHHH
T ss_pred hhhHHHHHHHhccccccHHHHhCCCceEeCCCCcHHHHHHHHHHcCCCEEEEECCCCeEEEEEEHHH
Confidence 7787777776666678899999998999999999999999999999999999998899999999876
No 3
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=99.85 E-value=1.4e-20 Score=142.87 Aligned_cols=120 Identities=17% Similarity=0.227 Sum_probs=107.2
Q ss_pred CCCCcccccccccccCceeEEcCCCCHHHHHHHHHHCCCCeEEEEcCC-CcEEEEEehHhHhhhccccCCCCCCCCcccc
Q 026495 78 PSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDD-WKLVGLVSDYDLLALDSISGSGRADNSMFPE 156 (237)
Q Consensus 78 ~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~pVvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~ 156 (237)
..+...+|+++|+++.+++++++++++.++++.|.+++++.+||+|++ |+++|+||.+|+++...
T Consensus 18 ~~l~~~~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~~~~-------------- 83 (148)
T 3lv9_A 18 FEFEEKKIREIMVPRTDMVCIYESDSEEKILAILKEEGVTRYPVCRKNKDDILGFVHIRDLYNQKI-------------- 83 (148)
T ss_dssp CGGGTCBGGGTSEETTTCCCEETTCCHHHHHHHHHHSCCSEEEEESSSTTSEEEEEEHHHHHHHHH--------------
T ss_pred hccCCCCHHHccccHHHeEEECCCCCHHHHHHHHHHCCCCEEEEEcCCCCcEEEEEEHHHHHHHHh--------------
Confidence 445778999999986678999999999999999999999999999987 89999999999986421
Q ss_pred cccchhhHHHHHHHHHhhcCCccccccccCceEEcCCCCHHHHHHHHHHcCCcEEEEEcCCCcEEEEEEccc
Q 026495 157 VDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGWNYHKRKCSK 228 (237)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~iGvIt~~d 228 (237)
.....++.++| ++++++++++++.++++.|.+++.+.+||+|++|+++|+||++|
T Consensus 84 ----------------~~~~~~v~~~m-~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~g~~~Giit~~d 138 (148)
T 3lv9_A 84 ----------------NENKIELEEIL-RDIIYISENLTIDKALERIRKEKLQLAIVVDEYGGTSGVVTIED 138 (148)
T ss_dssp ----------------HHSCCCGGGTC-BCCEEEETTSBHHHHHHHHHHHTCSEEEEECTTSSEEEEEEHHH
T ss_pred ----------------cCCCccHHHhc-CCCeEECCCCCHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHH
Confidence 11257899999 88899999999999999999999999999998899999999876
No 4
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=99.85 E-value=8.6e-21 Score=140.48 Aligned_cols=117 Identities=22% Similarity=0.336 Sum_probs=102.1
Q ss_pred cccccccccccCceeEEcCCCCHHHHHHHHHHCCCCeEEEEcCC-CcEEEEEehHhHhhhccccCCCCCCCCcccccccc
Q 026495 82 VYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDD-WKLVGLVSDYDLLALDSISGSGRADNSMFPEVDST 160 (237)
Q Consensus 82 ~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~pVvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~~ 160 (237)
+++|+++|.+..+++++++++++.+|++.|.+++++.+||+|++ |+++|+||.+|+++....
T Consensus 2 ~~~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~vGivt~~dl~~~~~~----------------- 64 (127)
T 3nqr_A 2 DQRVRDIMIPRSQMITLKRNQTLDECLDVIIESAHSRFPVISEDKDHIEGILMAKDLLPFMRS----------------- 64 (127)
T ss_dssp -CBHHHHSEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGGST-----------------
T ss_pred CcCHHHhcccHHHeEEEcCCCCHHHHHHHHHhCCCCEEEEEcCCCCcEEEEEEHHHHHHHHhc-----------------
Confidence 45899999973358999999999999999999999999999987 899999999999975321
Q ss_pred hhhHHHHHHHHHhhcCCccccccccCceEEcCCCCHHHHHHHHHHcCCcEEEEEcCCCcEEEEEEccc
Q 026495 161 WKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGWNYHKRKCSK 228 (237)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~iGvIt~~d 228 (237)
.....+++++|.+ +.++++++++.++++.|.+++.+.+||+|++|+++|+||++|
T Consensus 65 ------------~~~~~~v~~~m~~-~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~Giit~~d 119 (127)
T 3nqr_A 65 ------------DAEAFSMDKVLRT-AVVVPESKRVDRMLKEFRSQRYHMAIVIDEFGGVSGLVTIED 119 (127)
T ss_dssp ------------TCCCCCHHHHCBC-CCEEETTCBHHHHHHHHHHTTCCEEEEECTTSCEEEEEEHHH
T ss_pred ------------cCCCCCHHHHcCC-CeEECCCCcHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHH
Confidence 1124678999955 779999999999999999999999999998899999999876
No 5
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=99.84 E-value=1.3e-20 Score=139.93 Aligned_cols=116 Identities=21% Similarity=0.296 Sum_probs=101.5
Q ss_pred CcccccccccccCceeEEcCCCCHHHHHHHHHHCCCCeEEEEcCC-CcEEEEEehHhHhhhccccCCCCCCCCccccccc
Q 026495 81 GVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDD-WKLVGLVSDYDLLALDSISGSGRADNSMFPEVDS 159 (237)
Q Consensus 81 ~~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~pVvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~ 159 (237)
...+|+++|+++.+++++++++++.+|++.|.+++++++||+|++ |+++|+||.+|+++...
T Consensus 3 ~~~~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~~Givt~~dl~~~~~----------------- 65 (129)
T 3jtf_A 3 AERTVADIMVPRSRMDLLDISQPLPQLLATIIETAHSRFPVYEDDRDNIIGILLAKDLLRYML----------------- 65 (129)
T ss_dssp -CCBHHHHCEEGGGCCCEETTSCHHHHHHHHHHSCCSEEEEESSSTTCEEEEEEGGGGGGGGT-----------------
T ss_pred CCCCHHHhCccHHHeEEECCCCCHHHHHHHHHHcCCCEEEEEcCCCCcEEEEEEHHHHHhHhc-----------------
Confidence 456899999964478999999999999999999999999999985 89999999999997531
Q ss_pred chhhHHHHHHHHHhhcCCccccccccCceEEcCCCCHHHHHHHHHHcCCcEEEEEcCCCcEEEEEEccc
Q 026495 160 TWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGWNYHKRKCSK 228 (237)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~iGvIt~~d 228 (237)
....+++++|.+ +.++.+++++.++++.|.+++.+.+||+|++|+++|+||++|
T Consensus 66 --------------~~~~~v~~~m~~-~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~g~~~Giit~~D 119 (129)
T 3jtf_A 66 --------------EPALDIRSLVRP-AVFIPEVKRLNVLLREFRASRNHLAIVIDEHGGISGLVTMED 119 (129)
T ss_dssp --------------CTTSCGGGGCBC-CCEEETTCBHHHHHHHHHTSSCCEEEEECC-CCEEEEEEHHH
T ss_pred --------------cCCcCHHHHhCC-CeEeCCCCcHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHH
Confidence 124678999955 789999999999999999999999999998899999999876
No 6
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=99.84 E-value=1.1e-20 Score=141.69 Aligned_cols=118 Identities=22% Similarity=0.262 Sum_probs=103.0
Q ss_pred cccccccccccCceeEEcCCCCHHHHHHHHHHCCCCeEEEEcCC-CcEEEEEehHhHhhhccccCCCCCCCCcccccccc
Q 026495 82 VYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDD-WKLVGLVSDYDLLALDSISGSGRADNSMFPEVDST 160 (237)
Q Consensus 82 ~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~pVvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~~ 160 (237)
+++|+++|+++.+++++++++++.+|++.|.+++++.+||+|++ |+++|+||.+||++.....
T Consensus 2 ~~~v~~iM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd~~~~~~vGivt~~dl~~~~~~~---------------- 65 (136)
T 3lfr_A 2 DLQVRDIMVPRSQMISIKATQTPREFLPAVIDAAHSRYPVIGESHDDVLGVLLAKDLLPLILKA---------------- 65 (136)
T ss_dssp -CBHHHHSEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGGGSS----------------
T ss_pred CCChHhccccHHHEEEEcCCCCHHHHHHHHHhCCCCEEEEEcCCCCcEEEEEEHHHHHHHHHhc----------------
Confidence 45899999964478999999999999999999999999999987 8999999999999753210
Q ss_pred hhhHHHHHHHHHhhcCCccccccccCceEEcCCCCHHHHHHHHHHcCCcEEEEEcCCCcEEEEEEccc
Q 026495 161 WKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGWNYHKRKCSK 228 (237)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~iGvIt~~d 228 (237)
.....+++++|.+ ++++.+++++.+|++.|.+++.+.+||+|++|+++|+||++|
T Consensus 66 ------------~~~~~~v~~~m~~-~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~lvGiit~~D 120 (136)
T 3lfr_A 66 ------------DGDSDDVKKLLRP-ATFVPESKRLNVLLREFRANHNHMAIVIDEYGGVAGLVTIED 120 (136)
T ss_dssp ------------SGGGCCGGGTCBC-CCEEETTCBHHHHHHHHHHHTCCEEEEECTTSCEEEEEEHHH
T ss_pred ------------cCCCcCHHHHcCC-CeEECCCCcHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHH
Confidence 1124679999966 889999999999999999999999999998899999999987
No 7
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=99.84 E-value=5.9e-21 Score=141.91 Aligned_cols=119 Identities=20% Similarity=0.228 Sum_probs=101.7
Q ss_pred CCcccccccccccCceeEEcCCCCHHHHHHHHHHCCCCeEEEEcCC-CcEEEEEehHhHhhhccccCCCCCCCCcccccc
Q 026495 80 SGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDD-WKLVGLVSDYDLLALDSISGSGRADNSMFPEVD 158 (237)
Q Consensus 80 ~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~pVvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~ 158 (237)
+...+|+++|++...++++++++++.+|++.|.+++++.+||+|++ |+++|+||.+|+++...
T Consensus 3 l~~~~v~~iM~~~~~v~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~~Givt~~dl~~~~~---------------- 66 (130)
T 3i8n_A 3 AQDVPVTQVMTPRPVVFRVDATMTINEFLDKHKDTPFSRPLVYSEQKDNIIGFVHRLELFKMQQ---------------- 66 (130)
T ss_dssp ----CCTTTSCCBCCCCEEETTSBHHHHHHHTTTCSCSCCEEESSSTTCEEEECCHHHHHHHHH----------------
T ss_pred cCcCCHhhCCCcHHHEEEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCcEEEEEEHHHHHHHHh----------------
Confidence 4667999999975467799999999999999999999999999987 89999999999997431
Q ss_pred cchhhHHHHHHHHHhhcCCccccccccCceEEcCCCCHHHHHHHHHHcCCcEEEEEcCCCcEEEEEEccc
Q 026495 159 STWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGWNYHKRKCSK 228 (237)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~iGvIt~~d 228 (237)
......++.++| +++.++.+++++.++++.|.+++.+.+||+|++|+++|+||++|
T Consensus 67 -------------~~~~~~~v~~~m-~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~~vGivt~~d 122 (130)
T 3i8n_A 67 -------------SGSGQKQLGAVM-RPIQVVLNNTALPKVFDQMMTHRLQLALVVDEYGTVLGLVTLED 122 (130)
T ss_dssp -------------TTTTTSBHHHHS-EECCEEETTSCHHHHHHHHHHHTCCEEEEECTTSCEEEEEEHHH
T ss_pred -------------cCCCcCCHHHHh-cCCcCcCCCCcHHHHHHHHHHcCCeEEEEEcCCCCEEEEEEHHH
Confidence 112246799999 45789999999999999999999999999998899999999876
No 8
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=99.84 E-value=3.9e-21 Score=147.87 Aligned_cols=121 Identities=21% Similarity=0.244 Sum_probs=103.1
Q ss_pred ccccccccccCceeEEcCCCCHHHHHHHHHHCCCCeEEEEcCCCcEEEEEehHhHhhhccccCCCCCCCCcccccccchh
Q 026495 83 YTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWK 162 (237)
Q Consensus 83 ~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (237)
.+++++|.|+++++++.+++|+.+|+++|.+++++++||+|++|+++|+||.+|++++.......
T Consensus 15 ~~~~~iM~P~~~v~~v~~~~t~~~a~~~m~~~~~s~~pVvd~~~~lvGiit~~Di~~~~~~~~~~--------------- 79 (156)
T 3k6e_A 15 GQEETFLTPAKNLAVLIDTHNADHATLLLSQMTYTRVPVVTDEKQFVGTIGLRDIMAYQMEHDLS--------------- 79 (156)
T ss_dssp TTGGGGEEETTSSCCEETTSBHHHHHHHHTTSSSSEEEEECC-CBEEEEEEHHHHHHHHHHHTCC---------------
T ss_pred ccHHHhCcchhHeEEECCcCCHHHHHHHHHHcCCcEEEEEcCCCcEEEEEEecchhhhhhhcccc---------------
Confidence 36789999988999999999999999999999999999999889999999999998753221110
Q ss_pred hHHHHHHHHHhhcCCccccccccCceEEcCCCCHHHHHHHHHHcCCcEEEEEcCCCcEEEEEEccc
Q 026495 163 TFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGWNYHKRKCSK 228 (237)
Q Consensus 163 ~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~iGvIt~~d 228 (237)
.......++.++|.++++++++++++.+|++.|.+++ .+||||++|+++|+||++|
T Consensus 80 --------~~~~~~~~v~~im~~~~~~v~~~~~l~~~~~~m~~~~--~lpVVd~~g~l~GiiT~~D 135 (156)
T 3k6e_A 80 --------QEIMADTDIVHMTKTDVAVVSPDFTITEVLHKLVDES--FLPVVDAEGIFQGIITRKS 135 (156)
T ss_dssp --------HHHHTTSBGGGTCBCSCCCBCTTCCHHHHHHHTTTSS--EEEEECTTSBEEEEEEHHH
T ss_pred --------cccccccCHHHhhcCCceecccccHHHHHHHHHHHcC--CeEEEecCCEEEEEEEHHH
Confidence 0112357899999999999999999999999998775 4999999999999999987
No 9
>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}
Probab=99.84 E-value=3.1e-20 Score=144.82 Aligned_cols=121 Identities=17% Similarity=0.146 Sum_probs=103.1
Q ss_pred CCCCCcccccccccccCceeEEcCCCCHHHHHHHHHHCCCCeEEEEcCC-CcEEEEEehHhHhhhccccCCCCCCCCccc
Q 026495 77 APSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDD-WKLVGLVSDYDLLALDSISGSGRADNSMFP 155 (237)
Q Consensus 77 ~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~pVvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~~~~~ 155 (237)
...+...+|+++|+++.+++++++++++.+|++.|.+++++.+||+|++ |+++|+||.+||++...
T Consensus 36 ~~~l~~~~v~diM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~~~~------------- 102 (172)
T 3lhh_A 36 VFRLDERTISSLMVPRSDIVFLDLNLPLDANLRTVMQSPHSRFPVCRNNVDDMVGIISAKQLLSESI------------- 102 (172)
T ss_dssp -------CTTTTSEEGGGCCCEETTSCHHHHHHHHHTCCCSEEEEESSSTTSEEEEEEHHHHHHHHH-------------
T ss_pred HhccCCCCHHHhCccHHHeEEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEEHHHHHHHHh-------------
Confidence 3456788999999954478999999999999999999999999999987 89999999999997421
Q ss_pred ccccchhhHHHHHHHHHhhcCCccccccccCceEEcCCCCHHHHHHHHHHcCCcEEEEEcCCCcEEEEEEccc
Q 026495 156 EVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGWNYHKRKCSK 228 (237)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~iGvIt~~d 228 (237)
.....++.++| ++++++.+++++.+|++.|.+++.+.+||+|++|+++|+||+.|
T Consensus 103 -----------------~~~~~~v~~im-~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~g~lvGiit~~D 157 (172)
T 3lhh_A 103 -----------------AGERLELVDLV-KNCNFVPNSLSGMELLEHFRTTGSQMVFVVDEYGDLKGLVTLQD 157 (172)
T ss_dssp -----------------TTCCCCGGGGC-BCCEEEETTCCHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHH
T ss_pred -----------------hcCcccHHHHh-cCCeEeCCCCCHHHHHHHHHHcCCeEEEEEeCCCCEEEEeeHHH
Confidence 12256899999 88999999999999999999999999999998899999999987
No 10
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=99.84 E-value=1.8e-20 Score=142.22 Aligned_cols=134 Identities=81% Similarity=1.184 Sum_probs=108.3
Q ss_pred CcccccccccccCceeEEcCCCCHHHHHHHHHHCCCCeEEEEcCCCcEEEEEehHhHhhhccccCCCCCCCCcccccccc
Q 026495 81 GVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDST 160 (237)
Q Consensus 81 ~~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~~ 160 (237)
..++++++|.+..+++++++++++.++++.|.+++++.+||+|++|+++|+||.+|++++... ...
T Consensus 3 ~~~~v~~im~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~G~vt~~dl~~~~~~--------------~~~ 68 (152)
T 4gqw_A 3 GVYTVGEFMTKKEDLHVVKPTTTVDEALELLVENRITGFPVIDEDWKLVGLVSDYDLLALDSG--------------DST 68 (152)
T ss_dssp CCSBGGGTSEESTTCCCBCTTSBHHHHHHHHHHTTCSEEEEECTTCBEEEEEEHHHHTTCC------------------C
T ss_pred ceEEhhhccCCCCCCeEECCCCcHHHHHHHHHHcCCceEEEEeCCCeEEEEEEHHHHHHhhcc--------------cCc
Confidence 456899999885568899999999999999999999999999988999999999999864321 111
Q ss_pred hhhHHHHHHHHHhhcCCccccccccCceEEcCCCCHHHHHHHHHHcCCcEEEEEcCCCcEEEEEEccc
Q 026495 161 WKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGWNYHKRKCSK 228 (237)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~iGvIt~~d 228 (237)
|..+.............++.++|.++++++.+++++.++++.|.+++.+.+||+|++|+++|+||.+|
T Consensus 69 ~~~~~~~~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Giit~~d 136 (152)
T 4gqw_A 69 WKTFNAVQKLLSKTNGKLVGDLMTPAPLVVEEKTNLEDAAKILLETKYRRLPVVDSDGKLVGIITRGN 136 (152)
T ss_dssp CHHHHHHHTC-----CCBHHHHSEESCCCEESSSBHHHHHHHHHHSSCCEEEEECTTSBEEEEEEHHH
T ss_pred ccchHHHHHHHHHhccccHHHhcCCCceEECCCCcHHHHHHHHHHCCCCEEEEECCCCcEEEEEEHHH
Confidence 22233322222233457899999998899999999999999999999999999998899999999876
No 11
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=99.83 E-value=1.6e-20 Score=139.77 Aligned_cols=118 Identities=14% Similarity=0.029 Sum_probs=100.8
Q ss_pred ccccccccccCceeEEcCCCCHHHHHHHHHHCCCCeEEEEcC-CCcEEEEEehHhHhhhccccCCCCCCCCcccccccch
Q 026495 83 YTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDD-DWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTW 161 (237)
Q Consensus 83 ~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~pVvd~-~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~~~ 161 (237)
++|+++|+++.+++++++++++.+|++.|.+++++.+||+++ +|+++|+||.+|++++......
T Consensus 2 ~~v~~iM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVv~~~~~~lvGivt~~dl~~~~~~~~~--------------- 66 (130)
T 3hf7_A 2 VSVNDIMVPRNEIVGIDINDDWKSIVRQLTHSPHGRIVLYRDSLDDAISMLRVREAYRLMTEKKE--------------- 66 (130)
T ss_dssp CBHHHHSEEGGGCCEEETTSCHHHHHHHHHTCSSSEEEEESSSGGGEEEEEEHHHHHHHHTSSSC---------------
T ss_pred cCHHHhCccHHHEEEEcCCCCHHHHHHHHHHCCCCeEEEEcCCCCcEEEEEEHHHHHHHHhccCc---------------
Confidence 578999986547899999999999999999999999999975 5899999999999975321100
Q ss_pred hhHHHHHHHHHhhcCCccccccccCceEEcCCCCHHHHHHHHHHcCCcEEEEEcCCCcEEEEEEccc
Q 026495 162 KTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGWNYHKRKCSK 228 (237)
Q Consensus 162 ~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~iGvIt~~d 228 (237)
....++.++| ++++++++++++.++++.|.+++.+.+||+|++|+++|+||++|
T Consensus 67 ------------~~~~~v~~~m-~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~lvGiit~~D 120 (130)
T 3hf7_A 67 ------------FTKEIMLRAA-DEIYFVPEGTPLSTQLVKFQRNKKKVGLVVDEYGDIQGLVTVED 120 (130)
T ss_dssp ------------CCHHHHHHHS-BCCCEEETTCBHHHHHHHHHHHCCCEEEEECTTSCEEEEEEHHH
T ss_pred ------------cchhhHHHhc-cCCeEeCCCCcHHHHHHHHHhcCCeEEEEEcCCCCEEEEeeHHH
Confidence 0124578888 66789999999999999999999999999998899999999876
No 12
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=99.83 E-value=2.8e-20 Score=136.25 Aligned_cols=112 Identities=21% Similarity=0.341 Sum_probs=102.1
Q ss_pred cccccccccCceeEEcCCCCHHHHHHHHHHCCCCeEEEEcCCCcEEEEEehHhHhhhccccCCCCCCCCcccccccchhh
Q 026495 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKT 163 (237)
Q Consensus 84 ~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (237)
+++++|.+ +++++++++++.++++.|.+++.+.+||+|++|+++|+|+.+|++++..
T Consensus 2 ~v~~im~~--~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~G~vt~~dl~~~~~--------------------- 58 (122)
T 3kpb_A 2 LVKDILSK--PPITAHSNISIMEAAKILIKHNINHLPIVDEHGKLVGIITSWDIAKALA--------------------- 58 (122)
T ss_dssp BHHHHCCS--CCCCEETTSBHHHHHHHHHHHTCSCEEEECTTSBEEEEECHHHHHHHHH---------------------
T ss_pred chHHhhCC--CCEEeCCCCcHHHHHHHHHHcCCCeEEEECCCCCEEEEEEHHHHHHHHH---------------------
Confidence 68899998 8999999999999999999999999999998899999999999986421
Q ss_pred HHHHHHHHHhhcCCccccccccCceEEcCCCCHHHHHHHHHHcCCcEEEEEcCCCcEEEEEEccc
Q 026495 164 FNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGWNYHKRKCSK 228 (237)
Q Consensus 164 ~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~iGvIt~~d 228 (237)
....++.++|.++++++.+++++.++++.|.+++.+.+||+|++|+++|+||.+|
T Consensus 59 ----------~~~~~v~~~~~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~g~~~Givt~~d 113 (122)
T 3kpb_A 59 ----------QNKKTIEEIMTRNVITAHEDEPVDHVAIKMSKYNISGVPVVDDYRRVVGIVTSED 113 (122)
T ss_dssp ----------TTCCBGGGTSBSSCCCEETTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHH
T ss_pred ----------hcccCHHHHhcCCCeEECCCCCHHHHHHHHHHhCCCeEEEECCCCCEEEEEeHHH
Confidence 1235799999999999999999999999999999999999998899999999876
No 13
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=99.82 E-value=4.5e-20 Score=136.67 Aligned_cols=117 Identities=19% Similarity=0.139 Sum_probs=104.0
Q ss_pred CcccccccccccCceeEEcCCCCHHHHHHHHHHCCCCeEEEEcCCCcEEEEEehHhHhhhccccCCCCCCCCcccccccc
Q 026495 81 GVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDST 160 (237)
Q Consensus 81 ~~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~~ 160 (237)
..++++++|.+ +++++++++++.+|++.|.+++++.+||+|+ |+++|+||.+|+.+......
T Consensus 3 ~s~~v~~~m~~--~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~-~~~~Givt~~dl~~~~~~~~--------------- 64 (128)
T 3gby_A 3 ASVTFSYLAET--DYPVFTLGGSTADAARRLAASGCACAPVLDG-ERYLGMVHLSRLLEGRKGWP--------------- 64 (128)
T ss_dssp TTCBGGGGCBC--CSCCEETTSBHHHHHHHHHHHTCSEEEEEET-TEEEEEEEHHHHHTTCSSSC---------------
T ss_pred cceEHHHhhcC--CcceECCCCCHHHHHHHHHHCCCcEEEEEEC-CEEEEEEEHHHHHHHHhhCC---------------
Confidence 45689999999 8999999999999999999999999999998 99999999999997532110
Q ss_pred hhhHHHHHHHHHhhcCCccccccccCceEEcCCCCHHHHHHHHHHcCCcEEEEEcCCCcEEEEEEccc
Q 026495 161 WKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGWNYHKRKCSK 228 (237)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~iGvIt~~d 228 (237)
....++.++|.+++.++.+++++.++++.|.+++.+.+||+|++|+++|+||++|
T Consensus 65 -------------~~~~~v~~~m~~~~~~v~~~~~l~~~~~~~~~~~~~~lpVvd~~g~~~Giit~~d 119 (128)
T 3gby_A 65 -------------TVKEKLGEELLETVRSYRPGEQLFDNLISVAAAKCSVVPLADEDGRYEGVVSRKR 119 (128)
T ss_dssp -------------CTTCBCCGGGCBCCCCBCTTSBGGGSHHHHHHCSSSEEEEECTTCBEEEEEEHHH
T ss_pred -------------cccCcHHHHccCCCcEECCCCCHHHHHHHHHhCCCcEEEEECCCCCEEEEEEHHH
Confidence 1125799999999999999999999999999999999999998899999999876
No 14
>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}
Probab=99.82 E-value=5.9e-20 Score=140.93 Aligned_cols=119 Identities=20% Similarity=0.276 Sum_probs=104.7
Q ss_pred CCCcccccccccccCceeEEcCCCCHHHHHHHHHHCCCCeEEEEcCC-CcEEEEEehHhHhhhccccCCCCCCCCccccc
Q 026495 79 SSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDD-WKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157 (237)
Q Consensus 79 ~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~pVvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~ 157 (237)
.+...+|+++|+++.+++++++++++.+|++.|.+++++++||+|++ |+++|+||.+|+++....
T Consensus 34 ~l~~~~v~diM~~~~~~~~v~~~~~i~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~~~~~-------------- 99 (156)
T 3oi8_A 34 DFSDLEVRDAMITRSRMNVLKENDSIERITAYVIDTAHSRFPVIGEDKDEVLGILHAKDLLKYMFN-------------- 99 (156)
T ss_dssp HHTTCBGGGTCEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGSSC--------------
T ss_pred ccCCCCHhheeeeHHHeEEECCCCCHHHHHHHHHHCCCCEEEEEcCCCCcEEEEEEHHHHHHHHHc--------------
Confidence 34677999999975568999999999999999999999999999987 499999999999975311
Q ss_pred ccchhhHHHHHHHHHhhcCCccccccccCceEEcCCCCHHHHHHHHHHcCCcEEEEEcCCCcEEEEEEccc
Q 026495 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGWNYHKRKCSK 228 (237)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~iGvIt~~d 228 (237)
....++.++|.+ +.++++++++.+|++.|.+++.+.+||+|++|+++|+||++|
T Consensus 100 ----------------~~~~~v~~im~~-~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~g~~~Givt~~D 153 (156)
T 3oi8_A 100 ----------------PEQFHLKSILRP-AVFVPEGKSLTALLKEFREQRNHMAIVIDEYGGTSGLVTFED 153 (156)
T ss_dssp ----------------GGGCCHHHHCBC-CCEEETTSBHHHHHHHHHHTTCCEEEEECTTSSEEEEEEHHH
T ss_pred ----------------CCcccHHHHcCC-CEEECCCCCHHHHHHHHHhcCCeEEEEECCCCCEEEEEEHHH
Confidence 024678999965 889999999999999999999999999998899999999876
No 15
>3fhm_A Uncharacterized protein ATU1752; CBS domain, prokaryotic, bound nucleotide, AMP, NADH, struct genomics, PSI-2; HET: AMP NAI; 2.70A {Agrobacterium tumefaciens str}
Probab=99.82 E-value=5.8e-20 Score=142.11 Aligned_cols=125 Identities=19% Similarity=0.248 Sum_probs=108.9
Q ss_pred CCCCCccccccccccc-CceeEEcCCCCHHHHHHHHHHCCCCeEEEEcCCCcEEEEEehHhHhhhccccCCCCCCCCccc
Q 026495 77 APSSGVYTVGDFMTTK-EELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFP 155 (237)
Q Consensus 77 ~~~~~~~~v~~im~~~-~~~~~v~~~~~l~~~~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~ 155 (237)
..++..++|+++|.+. ++++++.+++++.+|++.|.+++++.+||+|++|+++|+||.+||++.+...+
T Consensus 18 ~~~l~~~~v~dim~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~---------- 87 (165)
T 3fhm_A 18 YFQGMATFVKDLLDRKGRDVVTVGPDVSIGEAAGTLHAHKIGAVVVTDADGVVLGIFTERDLVKAVAGQG---------- 87 (165)
T ss_dssp CCSSSSCBHHHHHHHHCSCCCEECTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHHHG----------
T ss_pred hHhhhhcCHHHHhccCCCCCeEECCCCCHHHHHHHHHHcCCCEEEEEcCCCeEEEEEEHHHHHHHHHhcC----------
Confidence 5677889999999962 25899999999999999999999999999998899999999999986432100
Q ss_pred ccccchhhHHHHHHHHHhhcCCccccccccCceEEcCCCCHHHHHHHHHHcCCcEEEEEcCCCcEEEEEEccc
Q 026495 156 EVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGWNYHKRKCSK 228 (237)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~iGvIt~~d 228 (237)
......++.++|.++++++.+++++.++++.|.+++.+.+||+|+ |+++|+||++|
T Consensus 88 ----------------~~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-g~~~Giit~~d 143 (165)
T 3fhm_A 88 ----------------AASLQQSVSVAMTKNVVRCQHNSTTDQLMEIMTGGRFRHVPVEEN-GRLAGIISIGD 143 (165)
T ss_dssp ----------------GGGGTSBGGGTSBSSCCCBCTTCBHHHHHHHHHHHTCSEEEEEET-TEEEEEEEHHH
T ss_pred ----------------CccccCCHHHHhcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEEC-CEEEEEEEHHH
Confidence 012357899999999999999999999999999999999999997 99999999876
No 16
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=99.81 E-value=1.6e-19 Score=134.24 Aligned_cols=117 Identities=23% Similarity=0.333 Sum_probs=103.9
Q ss_pred CcccccccccccCceeEEcCCCCHHHHHHHHHHCCCCeEEEEcCCCcEEEEEehHhHhhhccccCCCCCCCCcccccccc
Q 026495 81 GVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDST 160 (237)
Q Consensus 81 ~~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~~ 160 (237)
...+++++|.+ +++++++++++.+|++.|.+++.+.+||+| +|+++|+||.+|+.++....
T Consensus 2 ~~~~v~~im~~--~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd-~~~~~Givt~~dl~~~~~~~---------------- 62 (133)
T 2ef7_A 2 EEEIVKEYMKT--QVISVTKDAKLNDIAKVMTEKNIGSVIVVD-GNKPVGIITERDIVKAIGKG---------------- 62 (133)
T ss_dssp CCCBGGGTSBC--SCCEEETTCBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHHTT----------------
T ss_pred CcccHHHhccC--CCEEECCCCcHHHHHHHHHhcCCCEEEEEE-CCEEEEEEcHHHHHHHHhcC----------------
Confidence 45789999998 799999999999999999999999999999 89999999999998643211
Q ss_pred hhhHHHHHHHHHhhcCCccccccccCceEEcCCCCHHHHHHHHHHcCCcEEEEEcCCCcEEEEEEccc
Q 026495 161 WKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGWNYHKRKCSK 228 (237)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~iGvIt~~d 228 (237)
.....++.++|.+++.++++++++.++++.|.+++.+.+||+|++|+++|+||++|
T Consensus 63 ------------~~~~~~v~~~~~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~g~~~Giit~~d 118 (133)
T 2ef7_A 63 ------------KSLETKAEEFMTASLITIREDSPITGALALMRQFNIRHLPVVDDKGNLKGIISIRD 118 (133)
T ss_dssp ------------CCTTCBGGGTSEECCCCEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHH
T ss_pred ------------CCcccCHHHHcCCCCEEECCCCCHHHHHHHHHHcCCCEEEEECCCCeEEEEEEHHH
Confidence 01246899999888999999999999999999999999999998899999999876
No 17
>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}
Probab=99.81 E-value=5.6e-20 Score=140.47 Aligned_cols=118 Identities=20% Similarity=0.284 Sum_probs=104.3
Q ss_pred CCcccccccccccCceeEEcCCCCHHHHHHHHHHCCCCeEEEE-cC-CCcEEEEEehHhHhhhccccCCCCCCCCccccc
Q 026495 80 SGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVI-DD-DWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157 (237)
Q Consensus 80 ~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~pVv-d~-~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~ 157 (237)
+...+|+++|+++.+++++++++++.+|++.|.+++++.+||+ |+ +|+++|+||.+||++...
T Consensus 17 l~~~~v~~iM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVv~d~~~~~lvGivt~~dl~~~~~--------------- 81 (153)
T 3oco_A 17 MNDKVASDVMVDRTSMSVVDVDETIADALLLYLEEQYSRFPVTADNDKDKIIGYAYNYDIVRQAR--------------- 81 (153)
T ss_dssp HHHCBHHHHSEEGGGCCCEETTSBHHHHHHHHHHHCCSEEEEEETTEEEEEEEEEEHHHHHHHHH---------------
T ss_pred cCCCEeeeEecchhheEEEcCCCCHHHHHHHHHhCCCCEEEEEECCCCCcEEEEEEHHHHHhHHh---------------
Confidence 4567999999964478999999999999999999999999999 65 489999999999996421
Q ss_pred ccchhhHHHHHHHHHhhcCCccccccccCceEEcCCCCHHHHHHHHHHcCCcEEEEEcCCCcEEEEEEccc
Q 026495 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGWNYHKRKCSK 228 (237)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~iGvIt~~d 228 (237)
.....++.++| ++++++.+++++.+|++.|.+++.+.+||+|++|+++|+||++|
T Consensus 82 ---------------~~~~~~v~~~m-~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~~g~~vGivt~~d 136 (153)
T 3oco_A 82 ---------------IDDKAKISTIM-RDIVSVPENMKVPDVMEEMSAHRVPMAIVIDEYGGTSGIITDKD 136 (153)
T ss_dssp ---------------HHTTSBGGGTC-BCCEEEETTSBHHHHHHHHHHTTCSCEEEECTTSCEEEEECHHH
T ss_pred ---------------cCCCCcHHHHh-CCCeEECCCCCHHHHHHHHHHcCCcEEEEEeCCCCEEEEeeHHH
Confidence 12257899999 88999999999999999999999999999998899999999876
No 18
>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A
Probab=99.81 E-value=2.6e-19 Score=134.66 Aligned_cols=116 Identities=16% Similarity=0.111 Sum_probs=102.7
Q ss_pred cccccccccccCceeEEcCCCCHHHHHHHHHHCCCCeEEEEcCCC--cEEEEEehHhHhhhccccCCCCCCCCccccccc
Q 026495 82 VYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDW--KLVGLVSDYDLLALDSISGSGRADNSMFPEVDS 159 (237)
Q Consensus 82 ~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~pVvd~~~--~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~ 159 (237)
.++++++|.+ ++.++++++++.++++.|.+++++.+||+|++| +++|+||.+|+++.....
T Consensus 4 ~~~v~~im~~--~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~~~Givt~~dl~~~~~~~--------------- 66 (141)
T 2rih_A 4 AIRTSELLKR--PPVSLPETATIREVATELAKNRVGLAVLTARDNPKRPVAVVSERDILRAVAQR--------------- 66 (141)
T ss_dssp -CBGGGGCCS--CCEEEETTCBHHHHHHHHHHHTCSEEEEEETTEEEEEEEEEEHHHHHHHHHTT---------------
T ss_pred ceEHHHHhcC--CCeEeCCCCcHHHHHHHHHHcCCCEEEEEcCCCcceeEEEEEHHHHHHHHhcC---------------
Confidence 3589999998 899999999999999999999999999999877 999999999998743210
Q ss_pred chhhHHHHHHHHHhhcCCccccccccCceEEcCCCCHHHHHHHHHHcCCcEEEEEcCCCcEEEEEEccc
Q 026495 160 TWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGWNYHKRKCSK 228 (237)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~iGvIt~~d 228 (237)
.....++.++|.+++++++++ ++.++++.|.+++.+.+||+|++|+++|+||++|
T Consensus 67 -------------~~~~~~v~~~m~~~~~~v~~~-~l~~a~~~m~~~~~~~l~Vvd~~g~~~Giit~~d 121 (141)
T 2rih_A 67 -------------LDLDGPAMPIANSPITVLDTD-PVHVAAEKMRRHNIRHVVVVNKNGELVGVLSIRD 121 (141)
T ss_dssp -------------CCTTSBSGGGCBCCCEEETTS-BHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHH
T ss_pred -------------CCCCCCHHHHcCCCCeEEcCC-CHHHHHHHHHHcCCeEEEEEcCCCcEEEEEEHHH
Confidence 012468999999999999999 9999999999999999999998899999999876
No 19
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=99.81 E-value=9.9e-20 Score=138.27 Aligned_cols=125 Identities=20% Similarity=0.228 Sum_probs=105.2
Q ss_pred CCcccccccccccCceeEEcCCCCHHHHHHHHHHCCCCeEEEEcCCCcEEEEEehHhHhhhccccCCCCCCCCccccccc
Q 026495 80 SGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDS 159 (237)
Q Consensus 80 ~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~ 159 (237)
+..++|+++|.+..+++++++++++.+|++.|.+++++.+||+|++|+++|+||.+||++.........
T Consensus 12 l~~~~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~----------- 80 (150)
T 3lqn_A 12 FQQIFVKDLMISSEKVAHVQIGNGLEHALLVLVKSGYSAIPVLDPMYKLHGLISTAMILDGILGLERIE----------- 80 (150)
T ss_dssp HHHCBHHHHSEEGGGSCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHTBCSSSBC-----------
T ss_pred hhcCChhhcccCCCceEEECCCCcHHHHHHHHHHcCCcEEEEECCCCCEEEEEEHHHHHHHHHhhcccc-----------
Confidence 456799999996336899999999999999999999999999998899999999999997643211000
Q ss_pred chhhHHHHHHHHHhhcCCccccccccCceEEcCCCCHHHHHHHHHHcCCcEEEEEcCCCcEEEEEEccc
Q 026495 160 TWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGWNYHKRKCSK 228 (237)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~iGvIt~~d 228 (237)
.......++.++|.++++++.+++++.+|++.|.++++ +||+|++|+++|+||++|
T Consensus 81 -----------~~~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~~~~~~~--l~Vvd~~g~~~Giit~~d 136 (150)
T 3lqn_A 81 -----------FERLEEMKVEQVMKQDIPVLKLEDSFAKALEMTIDHPF--ICAVNEDGYFEGILTRRA 136 (150)
T ss_dssp -----------GGGGGGCBGGGTCBSSCCEEETTCBHHHHHHHHHHCSE--EEEECTTCBEEEEEEHHH
T ss_pred -----------hhHHhcCCHHHHhcCCCceeCCCCCHHHHHHHHHhCCE--EEEECCCCcEEEEEEHHH
Confidence 00123578999999999999999999999999999886 999998899999999876
No 20
>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1
Probab=99.81 E-value=3.9e-19 Score=133.02 Aligned_cols=119 Identities=24% Similarity=0.319 Sum_probs=104.4
Q ss_pred CCCcccccccccccCceeEEcCCCCHHHHHHHHHHCCCCeEEEEcCCCcEEEEEehHhHhh-hccccCCCCCCCCccccc
Q 026495 79 SSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA-LDSISGSGRADNSMFPEV 157 (237)
Q Consensus 79 ~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~-~~~~~~~~~~~~~~~~~~ 157 (237)
.+...+++++|.+ +++++++++++.+|++.|.+++++.+||+|++|+++|+||.+|+++ +.. .+
T Consensus 3 ~l~~~~v~~im~~--~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~-~~------------ 67 (138)
T 2yzi_A 3 MDMKAPIKVYMTK--KLLGVKPSTSVQEASRLMMEFDVGSLVVINDDGNVVGFFTKSDIIRRVIV-PG------------ 67 (138)
T ss_dssp CCTTSBGGGTCBC--CCCEECTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHTTT-TC------------
T ss_pred chhhhhHHHHhcC--CCeEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHHh-cC------------
Confidence 3467799999998 8999999999999999999999999999998899999999999973 321 10
Q ss_pred ccchhhHHHHHHHHHhhcCCccccccccCceEEcCCCCHHHHHHHHHHcCCcEEEEEcCCCcEEEEEEccc
Q 026495 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGWNYHKRKCSK 228 (237)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~iGvIt~~d 228 (237)
.....++.++|.++++++++++++.++++.|.+++.+.+ |+|++|+++|+||.+|
T Consensus 68 ---------------~~~~~~v~~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~l-Vvd~~g~~~Giit~~d 122 (138)
T 2yzi_A 68 ---------------LPYDIPVERIMTRNLITANVNTPLGEVLRKMAEHRIKHI-LIEEEGKIVGIFTLSD 122 (138)
T ss_dssp ---------------CCTTSBGGGTCBCSCCEEETTSBHHHHHHHHHHHTCSEE-EEEETTEEEEEEEHHH
T ss_pred ---------------CcccCCHHHHhhCCCeEECCCCcHHHHHHHHHhcCCCEE-EECCCCCEEEEEEHHH
Confidence 012468999999999999999999999999999999999 9998899999999876
No 21
>3ocm_A Putative membrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADP; 1.80A {Bordetella parapertussis}
Probab=99.80 E-value=2.4e-19 Score=140.09 Aligned_cols=118 Identities=16% Similarity=0.097 Sum_probs=102.7
Q ss_pred CCCcccccccccccCceeEEcCCCCHHHHHHHHHHCCCCeEEEEcCC-CcEEEEEehHhHhhhccccCCCCCCCCccccc
Q 026495 79 SSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDD-WKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157 (237)
Q Consensus 79 ~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~pVvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~ 157 (237)
.+...+|+++|+++.+++++++++++.++++.|.+++++.+||+|++ |+++|+||.+||++...
T Consensus 32 ~l~~~~v~diM~~~~~v~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~lvGivt~~Dl~~~~~--------------- 96 (173)
T 3ocm_A 32 TLAERSIRSIMTPRTDVSWVNIDDDAATIRQQLTAAPHSFFPVCRGSLDEVVGIGRAKDLVADLI--------------- 96 (173)
T ss_dssp HHTTSCSTTTSEEGGGCCCEETTSCHHHHHHHHHHSSCSEEEEESSSTTSEEEEEEHHHHHHHHH---------------
T ss_pred ccCCCCHHHhCCcHHHeEEEeCCCCHHHHHHHHHhCCCCEEEEEeCCCCCEEEEEEHHHHHHHHh---------------
Confidence 45677999999865478999999999999999999999999999976 89999999999996421
Q ss_pred ccchhhHHHHHHHHHhhcCCccccccccCceEEcCCCCHHHHHHHHHHcCCcEEEEEcCCCcEEEEEEccc
Q 026495 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGWNYHKRKCSK 228 (237)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~iGvIt~~d 228 (237)
.....++. + .++++++++++++.+|++.|.+++.+.+||+|++|+++|+||+.|
T Consensus 97 ---------------~~~~~~v~-~-~~~~~~v~~~~~l~~al~~m~~~~~~~~~Vvde~g~lvGiIT~~D 150 (173)
T 3ocm_A 97 ---------------TEGRVRRN-R-LRDPIIVHESIGILRLMDTLKRSRGQLVLVADEFGAIEGLVTPID 150 (173)
T ss_dssp ---------------HHSSCCGG-G-SBCCCEECGGGCHHHHHHHHHHSTTCCEEEECTTCCEEEEECHHH
T ss_pred ---------------cCCcchhH-h-cCCCeEECCCCcHHHHHHHHHHcCCeEEEEEeCCCCEEEEEeHHH
Confidence 11245677 4 477889999999999999999999999999998899999999886
No 22
>3k2v_A Putative D-arabinose 5-phosphate isomerase; KPSF-like protein, CBS domain, structural genomics, PSI-2, P structure initiative; HET: MSE CMK; 1.95A {Klebsiella pneumoniae subsp} PDB: 3fna_A*
Probab=99.80 E-value=3.9e-19 Score=135.09 Aligned_cols=118 Identities=23% Similarity=0.259 Sum_probs=103.7
Q ss_pred ccccccccccCceeEEcCCCCHHHHHHHHHHCCCCeEEEEcCCCcEEEEEehHhHhhhccccCCCCCCCCcccccccchh
Q 026495 83 YTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWK 162 (237)
Q Consensus 83 ~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (237)
++|+++|.+.++++++++++++.++++.|.+++++.+||+|++|+++|+||.+||.+.+....
T Consensus 28 ~~v~dim~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~----------------- 90 (149)
T 3k2v_A 28 LRVNDIMHTGDEIPHVGLQATLRDALLEITRKNLGMTAICDDDMNIIGIFTDGDLRRVFDTGV----------------- 90 (149)
T ss_dssp SBGGGTSBCGGGSCEECTTCBHHHHHHHHHHHTSSEEEEECTTCBEEEEEEHHHHHHHHCSSS-----------------
T ss_pred cCHHHHhcCCCCCeEECCCCcHHHHHHHHHhCCCcEEEEECCCCcEEEEecHHHHHHHHhcCC-----------------
Confidence 589999987556899999999999999999999999999998899999999999997542110
Q ss_pred hHHHHHHHHHhhcCCccccccccCceEEcCCCCHHHHHHHHHHcCCcEEEEEcCCCcEEEEEEccc
Q 026495 163 TFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGWNYHKRKCSK 228 (237)
Q Consensus 163 ~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~iGvIt~~d 228 (237)
.....++.++|.+++.++.+++++.++++.|.+++++.+||+|+ ++++|+||++|
T Consensus 91 ----------~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-~~~~Giit~~d 145 (149)
T 3k2v_A 91 ----------DMRDASIADVMTRGGIRIRPGTLAVDALNLMQSRHITCVLVADG-DHLLGVVHMHD 145 (149)
T ss_dssp ----------CCTTCBHHHHSEESCCEECTTCBHHHHHHHHHHHTCSEEEEEET-TEEEEEEEHHH
T ss_pred ----------CcccCcHHHHcCCCCeEECCCCCHHHHHHHHHHcCCCEEEEecC-CEEEEEEEHHH
Confidence 11246899999999999999999999999999999999999995 49999999876
No 23
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=99.80 E-value=5.2e-19 Score=141.94 Aligned_cols=114 Identities=19% Similarity=0.258 Sum_probs=104.1
Q ss_pred CCcccccccccccCceeEEcCCCCHHHHHHHHHHC---CCCeEEEEcCCCcEEEEEehHhHhhhccccCCCCCCCCcccc
Q 026495 80 SGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEK---RITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPE 156 (237)
Q Consensus 80 ~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~---~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~ 156 (237)
+...+++++|++ +++++++++|+.+|++.|.+. +++.+||+|++|+++|+||.+||+..
T Consensus 51 ~~~~~v~~iM~~--~~~~v~~~~tv~eal~~~~~~~~~~~~~~~Vvd~~~~lvGivt~~dll~~---------------- 112 (205)
T 3kxr_A 51 YSENEIGRYTDH--QMLVLSDKATVAQAQRFFRRIELDCNDNLFIVDEADKYLGTVRRYDIFKH---------------- 112 (205)
T ss_dssp SCTTCGGGGCBC--CCCEEETTCBHHHHHHHHHHCCCTTCCEEEEECTTCBEEEEEEHHHHTTS----------------
T ss_pred CCcchHHhhccC--ceEEECCCCcHHHHHHHHHhhCccCeeEEEEEcCCCeEEEEEEHHHHHhC----------------
Confidence 456689999999 899999999999999999987 78999999999999999999999852
Q ss_pred cccchhhHHHHHHHHHhhcCCccccccccCceEEcCCCCHHHHHHHHHHcCCcEEEEEcCCCcEEEEEEccc
Q 026495 157 VDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGWNYHKRKCSK 228 (237)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~iGvIt~~d 228 (237)
....+++++|.++++++++++++.++++.|.+++++.+||||++|+++|+||..|
T Consensus 113 -----------------~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVVD~~g~lvGiIT~~D 167 (205)
T 3kxr_A 113 -----------------EPHEPLISLLSEDSRALTANTTLLDAAEAIEHSREIELPVIDDAGELIGRVTLRA 167 (205)
T ss_dssp -----------------CTTSBGGGGCCSSCCCEETTSCHHHHHHHHHTSSCSEEEEECTTSBEEEEEEHHH
T ss_pred -----------------CCcchHHHHhcCCCeEECCCCCHHHHHHHHHhcCCCEEEEEcCCCeEEEEEEHHH
Confidence 1246899999989999999999999999999999999999998899999999876
No 24
>2p9m_A Hypothetical protein MJ0922; structural genomics, collaboratory for structural genomics, secsg; 2.59A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID}
Probab=99.80 E-value=2.8e-19 Score=133.73 Aligned_cols=119 Identities=27% Similarity=0.342 Sum_probs=104.1
Q ss_pred CCcccccccccccCceeEEcCCCCHHHHHHHHHHCCCCeEEEEcCCCcEEEEEehHhH-hhhccccCCCCCCCCcccccc
Q 026495 80 SGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDL-LALDSISGSGRADNSMFPEVD 158 (237)
Q Consensus 80 ~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~pVvd~~~~~~Givt~~dl-~~~~~~~~~~~~~~~~~~~~~ 158 (237)
+...+++++|.+ ++.++++++++.++++.|.+++.+.+||+|++|+++|+|+.+|+ .++....
T Consensus 5 l~~~~v~~im~~--~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~-------------- 68 (138)
T 2p9m_A 5 LKNIKVKDVMTK--NVITAKRHEGVVEAFEKMLKYKISSLPVIDDENKVIGIVTTTDIGYNLIRDK-------------- 68 (138)
T ss_dssp CTTCBGGGTSBC--SCCCEETTSBHHHHHHHHHHHTCCEEEEECTTCBEEEEEEHHHHHHHHTTTC--------------
T ss_pred cccCCHHHhhcC--CceEECCCCcHHHHHHHHHHCCCcEEEEECCCCeEEEEEEHHHHHHHHHhhc--------------
Confidence 456799999988 79999999999999999999999999999988999999999999 7643210
Q ss_pred cchhhHHHHHHHHHhhcCCccccccccCceEEcCCCCHHHHHHHHHHcC-----CcEEEEEcCCCcEEEEEEccc
Q 026495 159 STWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETK-----YRRLPVVDADGWNYHKRKCSK 228 (237)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~-----~~~lpVvd~~~~~iGvIt~~d 228 (237)
.....++.++|.+++.++++++++.++++.|.+++ .+.+||+|++|+++|+||.+|
T Consensus 69 --------------~~~~~~v~~~m~~~~~~v~~~~~l~~~~~~~~~~~~~~~~~~~l~Vvd~~g~~~Giit~~d 129 (138)
T 2p9m_A 69 --------------YTLETTIGDVMTKDVITIHEDASILEAIKKMDISGKKEEIINQLPVVDKNNKLVGIISDGD 129 (138)
T ss_dssp --------------CCSSCBHHHHSCSSCCCEETTSBHHHHHHHHTCC-----CCCEEEEECTTSBEEEEEEHHH
T ss_pred --------------ccCCcCHHHHhCCCcEEECCCCCHHHHHHHHHhcCCccccccEEEEECCCCeEEEEEEHHH
Confidence 11246799999988999999999999999999999 999999998899999999876
No 25
>3fv6_A YQZB protein; CBS domain dimer, metabolism regulator, central glycolytic G regulator, transcription; 1.95A {Bacillus subtilis} PDB: 3fwr_A* 3fws_A*
Probab=99.79 E-value=5.2e-19 Score=135.90 Aligned_cols=120 Identities=23% Similarity=0.244 Sum_probs=104.3
Q ss_pred CCCcccccccccccCceeEEcCCCCHHHHHHHHHHCCCCeEEEEcCCCcEEEEEehHhHhhhccccCCCCCCCCcccccc
Q 026495 79 SSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVD 158 (237)
Q Consensus 79 ~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~ 158 (237)
.+..++|+++|.+ . +++.+++++.+|++.|.+++++.+||+|++|+++|+||.+||++......
T Consensus 13 ~l~~~~v~~im~~--~-~~v~~~~~~~~a~~~m~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~------------- 76 (159)
T 3fv6_A 13 KLKKLQVKDFQSI--P-VVIHENVSVYDAICTMFLEDVGTLFVVDRDAVLVGVLSRKDLLRASIGQQ------------- 76 (159)
T ss_dssp HHTTCBGGGSCBC--C-CEEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHTSCS-------------
T ss_pred HHhhCCHHHHcCC--C-EEECCCCcHHHHHHHHHHCCCCEEEEEcCCCcEEEEEeHHHHHHHhhccC-------------
Confidence 3466799999987 4 59999999999999999999999999998899999999999997531110
Q ss_pred cchhhHHHHHHHHHhhcCCcccccccc--CceEEcCCCCHHHHHHHHHHcCCcEEEEEcCCC---cEEEEEEccc
Q 026495 159 STWKTFNEVQKLLSKTNGKMVGDLMTP--APVVVRETTNLEDAARLLLETKYRRLPVVDADG---WNYHKRKCSK 228 (237)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~v~~im~~--~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~---~~iGvIt~~d 228 (237)
.....++.++|.+ ++.++.+++++.+|++.|.+++++.+||+|++| +++|+||++|
T Consensus 77 --------------~~~~~~v~~~m~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~~~vGiit~~d 137 (159)
T 3fv6_A 77 --------------ELTSVPVHIIMTRMPNITVCRREDYVMDIAKHLIEKQIDALPVIKDTDKGFEVIGRVTKTN 137 (159)
T ss_dssp --------------CTTTCBGGGTSEETTSCCCBCTTSBHHHHHHHHHHHTCSEEEEEEECSSSEEEEEEEEHHH
T ss_pred --------------cccCcCHHHHHcCCCCcEEECCCCCHHHHHHHHHHcCCcEEEEEeCCCcceeEEEEEEHHH
Confidence 1124689999988 888999999999999999999999999999777 9999999876
No 26
>1pbj_A Hypothetical protein; structural genomics, domain, PSI, protein structure initiative; 1.40A {Methanothermobacter thermautotrophicusdelta H} SCOP: d.37.1.1
Probab=99.79 E-value=5.4e-19 Score=129.83 Aligned_cols=115 Identities=19% Similarity=0.230 Sum_probs=100.8
Q ss_pred ccccccccccCceeEEcCCCCHHHHHHHHHHCCCCeEEEEcCCCcEEEEEehHhHhhhccccCCCCCCCCcccccccchh
Q 026495 83 YTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWK 162 (237)
Q Consensus 83 ~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (237)
++++++|.+ +++++++++++.++++.|.+++.+.+||+| +|+++|+||.+|++++.....
T Consensus 1 m~v~~~m~~--~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd-~~~~~G~it~~dl~~~~~~~~----------------- 60 (125)
T 1pbj_A 1 MRVEDVMVT--DVDTIDITASLEDVLRNYVENAKGSSVVVK-EGVRVGIVTTWDVLEAIAEGD----------------- 60 (125)
T ss_dssp -CHHHHCBC--SCCEEETTCBHHHHHHHHHHHCCCEEEEEE-TTEEEEEEEHHHHHHHHHHTC-----------------
T ss_pred CCHHHhcCC--CceEECCCCcHHHHHHHHHHcCCCEEEEEe-CCeeEEEEeHHHHHHHHhcCC-----------------
Confidence 368899998 899999999999999999999999999999 899999999999986432110
Q ss_pred hHHHHHHHHHhhcCCccccccccCceEEcCCCCHHHHHHHHHHcCCcEEEEEcCCCcEEEEEEccc
Q 026495 163 TFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGWNYHKRKCSK 228 (237)
Q Consensus 163 ~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~iGvIt~~d 228 (237)
.....++.++|.+++.++++++++.++++.|.+++.+.+||+|+ |+++|+||++|
T Consensus 61 ----------~~~~~~v~~~m~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~-~~~~Gvit~~d 115 (125)
T 1pbj_A 61 ----------DLAEVKVWEVMERDLVTISPRATIKEAAEKMVKNVVWRLLVEED-DEIIGVISATD 115 (125)
T ss_dssp ----------CTTTSBHHHHCBCGGGEECTTSCHHHHHHHHHHHTCSEEEEEET-TEEEEEEEHHH
T ss_pred ----------cccccCHHHHcCCCCeEECCCCCHHHHHHHHHhcCCcEEEEEEC-CEEEEEEEHHH
Confidence 01246799999988999999999999999999999999999997 99999999876
No 27
>1pvm_A Conserved hypothetical protein TA0289; structural genomics, CBS domain, PSI, protein structure initiative; 1.50A {Thermoplasma acidophilum dsm 1728} SCOP: d.37.1.1 g.41.13.1 PDB: 2qh1_A
Probab=99.79 E-value=1.5e-18 Score=136.57 Aligned_cols=119 Identities=24% Similarity=0.261 Sum_probs=104.6
Q ss_pred cccccccccccCceeEEcCCCCHHHHHHHHHHCCCCeEEEEcCCCcEEEEEehHhHhhhccccCCCCCCCCcccccccch
Q 026495 82 VYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTW 161 (237)
Q Consensus 82 ~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~~~ 161 (237)
.++++++|.+ +++++++++++.+|++.|.+++++.+||+|++|+++|+||.+||++.......
T Consensus 8 ~~~v~~im~~--~~~~v~~~~~l~ea~~~~~~~~~~~~pVvd~~g~~vGivt~~dl~~~~~~~~~--------------- 70 (184)
T 1pvm_A 8 FMRVEKIMNS--NFKTVNWNTTVFDAVKIMNENHLYGLVVKDDNGNDVGLLSERSIIKRFIPRNK--------------- 70 (184)
T ss_dssp CCBGGGTSBT--TCCEEETTCBHHHHHHHHHHHTCCEEEEECTTSCEEEEEEHHHHHHHTGGGCC---------------
T ss_pred ccCHHHhcCC--CCeEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHhhccc---------------
Confidence 3689999998 89999999999999999999999999999988999999999999875321100
Q ss_pred hhHHHHHHHHHhhcCCccccccccCceEEcCCCCHHHHHHHHHHcCCcEEEEEcCCCcEEEEEEccc
Q 026495 162 KTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGWNYHKRKCSK 228 (237)
Q Consensus 162 ~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~iGvIt~~d 228 (237)
.....++.++|.+++.++.+++++.+|++.|.+++.+.+||+|++|+++|+||++|
T Consensus 71 -----------~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~Givt~~d 126 (184)
T 1pvm_A 71 -----------KPDEVPIRLVMRKPIPKVKSDYDVKDVAAYLSENGLERCAVVDDPGRVVGIVTLTD 126 (184)
T ss_dssp -----------CGGGSBGGGTSBSSCCEEETTCBHHHHHHHHHHHTCSEEEEECTTCCEEEEEEHHH
T ss_pred -----------CcccCCHHHHhCCCCcEECCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHH
Confidence 11246799999988999999999999999999999999999998799999999876
No 28
>2rc3_A CBS domain; in SITU proteolysis, BR, structural genomics, PSI-2, protein structure initiative; HET: NAD; 1.60A {Nitrosomonas europaea atcc 19718} SCOP: d.37.1.1
Probab=99.79 E-value=7.2e-19 Score=131.16 Aligned_cols=117 Identities=25% Similarity=0.345 Sum_probs=101.0
Q ss_pred ccccccccc-CceeEEcCCCCHHHHHHHHHHCCCCeEEEEcCCCcEEEEEehHhHhhhccccCCCCCCCCcccccccchh
Q 026495 84 TVGDFMTTK-EELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWK 162 (237)
Q Consensus 84 ~v~~im~~~-~~~~~v~~~~~l~~~~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (237)
+++++|.++ .+++++++++++.+|++.|.+++.+.+||+| +|+++|+||.+|+++.....+.
T Consensus 7 ~v~~im~~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd-~~~~~Givt~~dl~~~~~~~~~---------------- 69 (135)
T 2rc3_A 7 TVKHLLQEKGHTVVAIGPDDSVFNAMQKMAADNIGALLVMK-DEKLVGILTERDFSRKSYLLDK---------------- 69 (135)
T ss_dssp BHHHHHHHHCCCCCEECTTSBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHGGGSSS----------------
T ss_pred eHHHHHhcCCCCcEEECCCCcHHHHHHHHHhcCCCEEEEEE-CCEEEEEEehHHHHHHHHHcCC----------------
Confidence 899999821 2799999999999999999999999999999 7999999999999853221110
Q ss_pred hHHHHHHHHHhhcCCccccccccCceEEcCCCCHHHHHHHHHHcCCcEEEEEcCCCcEEEEEEccc
Q 026495 163 TFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGWNYHKRKCSK 228 (237)
Q Consensus 163 ~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~iGvIt~~d 228 (237)
.....++.++|.+++.++++++++.++++.|.+++.+.+||+| +|+++|+||++|
T Consensus 70 ----------~~~~~~v~~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd-~g~~~Giit~~d 124 (135)
T 2rc3_A 70 ----------PVKDTQVKEIMTRQVAYVDLNNTNEDCMALITEMRVRHLPVLD-DGKVIGLLSIGD 124 (135)
T ss_dssp ----------CGGGSBGGGTSBCSCCCBCTTCBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHH
T ss_pred ----------CcccCCHHHhccCCCeEECCCCcHHHHHHHHHHhCCCEEEEEe-CCEEEEEEEHHH
Confidence 0124689999999999999999999999999999999999999 799999999876
No 29
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=99.79 E-value=8.1e-19 Score=134.17 Aligned_cols=123 Identities=21% Similarity=0.233 Sum_probs=102.9
Q ss_pred CcccccccccccCceeEEcCCCCHHHHHHHHHHCCCCeEEEEcCCCcEEEEEehHhHhhhccccCCCCCCCCcccccccc
Q 026495 81 GVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDST 160 (237)
Q Consensus 81 ~~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~~ 160 (237)
...+++++|.+..+++++++++++.+|++.|.+++++.+||+|++|+++|+||.+||+++.......
T Consensus 13 ~~~~v~dim~p~~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~~~~~Giit~~dl~~~~~~~~~~------------- 79 (156)
T 3ctu_A 13 LLGQEETFLTPAKNLAVLIDTHNADHATLLLSQMTYTRVPVVTDEKQFVGTIGLRDIMAYQMEHDLS------------- 79 (156)
T ss_dssp HHTTGGGGEEEGGGCCCEETTSBHHHHHHHHTTCSSSEEEEECC-CBEEEEEEHHHHHHHHHHHTCC-------------
T ss_pred HHHHHHHHcCcccCceEECCCCCHHHHHHHHHHCCCceEeEECCCCEEEEEEcHHHHHHHHHhcccc-------------
Confidence 4458899999655899999999999999999999999999999889999999999999753211100
Q ss_pred hhhHHHHHHHHHhhcCCccccccccCceEEcCCCCHHHHHHHHHHcCCcEEEEEcCCCcEEEEEEccc
Q 026495 161 WKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGWNYHKRKCSK 228 (237)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~iGvIt~~d 228 (237)
.......++.++|.++++++.+++++.+|++.|.+++ .+||+|++|+++|+||++|
T Consensus 80 ----------~~~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~~~~~~--~lpVvd~~g~~~Giit~~d 135 (156)
T 3ctu_A 80 ----------QEIMADTDIVHMTKTDVAVVSPDFTITEVLHKLVDES--FLPVVDAEGIFQGIITRKS 135 (156)
T ss_dssp ----------HHHHTTSBGGGGCBCSCCCBCSSCCHHHHHHHTTTSS--EEEEECTTSBEEEEEETTH
T ss_pred ----------ccccccCcHHHhccCCceeeCCCCcHHHHHHHHHHcC--eEEEEcCCCeEEEEEEHHH
Confidence 0011257899999999999999999999999999886 6999998899999999876
No 30
>1y5h_A Hypothetical protein RV2626C; CBS domain, unknown function; 1.50A {Mycobacterium tuberculosis} SCOP: d.37.1.1 PDB: 1xkf_A
Probab=99.78 E-value=5.2e-19 Score=131.51 Aligned_cols=118 Identities=20% Similarity=0.289 Sum_probs=101.7
Q ss_pred CcccccccccccCceeEEcCCCCHHHHHHHHHHCCCCeEEEEcCCCcEEEEEehHhHh-hhccccCCCCCCCCccccccc
Q 026495 81 GVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL-ALDSISGSGRADNSMFPEVDS 159 (237)
Q Consensus 81 ~~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~-~~~~~~~~~~~~~~~~~~~~~ 159 (237)
...+++++|.+ +++++++++++.++++.|.+++.+.+||+|++|+++|+||.+|++ ++.... .
T Consensus 6 ~~~~v~~im~~--~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~-~------------- 69 (133)
T 1y5h_A 6 TMTTARDIMNA--GVTCVGEHETLTAAAQYMREHDIGALPICGDDDRLHGMLTDRDIVIKGLAAG-L------------- 69 (133)
T ss_dssp --CCHHHHSEE--TCCCEETTSBHHHHHHHHHHHTCSEEEEECGGGBEEEEEEHHHHHHTTGGGT-C-------------
T ss_pred hhcCHHHHhcC--CceEeCCCCCHHHHHHHHHHhCCCeEEEECCCCeEEEEEeHHHHHHHHHhcC-C-------------
Confidence 34589999998 799999999999999999999999999998889999999999998 332211 0
Q ss_pred chhhHHHHHHHHHhhcCCccccccccCceEEcCCCCHHHHHHHHHHcCCcEEEEEcCCCcEEEEEEccc
Q 026495 160 TWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGWNYHKRKCSK 228 (237)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~iGvIt~~d 228 (237)
.....++.++|.++++++++++++.++++.|.+++.+.+||+|+ |+++|+||++|
T Consensus 70 -------------~~~~~~v~~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~-g~~~Giit~~d 124 (133)
T 1y5h_A 70 -------------DPNTATAGELARDSIYYVDANASIQEMLNVMEEHQVRRVPVISE-HRLVGIVTEAD 124 (133)
T ss_dssp -------------CTTTSBHHHHHTTCCCCEETTCCHHHHHHHHHHHTCSEEEEEET-TEEEEEEEHHH
T ss_pred -------------CccccCHHHHhcCCCEEECCCCCHHHHHHHHHHcCCCEEEEEEC-CEEEEEEEHHH
Confidence 01246799999889999999999999999999999999999996 99999999876
No 31
>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1
Probab=99.78 E-value=9.5e-19 Score=134.63 Aligned_cols=126 Identities=26% Similarity=0.244 Sum_probs=104.0
Q ss_pred CcccccccccccCceeEEcCCCCHHHHHHHHHHCCCCeEEEEcCCCcEEEEEehHhHhhhccccCCCCCCCCcccccccc
Q 026495 81 GVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDST 160 (237)
Q Consensus 81 ~~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~~ 160 (237)
..++|+++|.+ +++++++++++.+|++.|.+++.+.+||+|++|+++|+||.+||+++.........
T Consensus 3 ~~~~v~dim~~--~~~~v~~~~tl~~a~~~m~~~~~~~~pVvd~~~~lvGivt~~dl~~~~~~~~~~~~----------- 69 (160)
T 2o16_A 3 LMIKVEDMMTR--HPHTLLRTHTLNDAKHLMEALDIRHVPIVDANKKLLGIVSQRDLLAAQESSLQRSA----------- 69 (160)
T ss_dssp CCCBGGGTSEE--SCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHHHHCC--------------
T ss_pred CcCcHHHHhcC--CCeEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHHHhhcccc-----------
Confidence 35689999998 79999999999999999999999999999988999999999999875321100000
Q ss_pred hhhHHHHHHHHHhhcCCccccccccCceEEcCCCCHHHHHHHHHHcCCcEEEEEcCCCcEEEEEEccc
Q 026495 161 WKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGWNYHKRKCSK 228 (237)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~iGvIt~~d 228 (237)
.........++.++|.++++++.+++++.+|++.|.+++.+.+||+|+ |+++|+||++|
T Consensus 70 --------~~~~~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-g~lvGiit~~d 128 (160)
T 2o16_A 70 --------QGDSLAFETPLFEVMHTDVTSVAPQAGLKESAIYMQKHKIGCLPVVAK-DVLVGIITDSD 128 (160)
T ss_dssp --------------CCCBHHHHSCSCEEEBCTTSBHHHHHHHHHHTTCSCEEEEET-TEEEEEECHHH
T ss_pred --------cccchhcccCHHHHhcCCCeEECCCCCHHHHHHHHHHhCCCEEEEEEC-CEEEEEEEHHH
Confidence 000012356899999999999999999999999999999999999996 99999999876
No 32
>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}
Probab=99.78 E-value=1.2e-18 Score=133.16 Aligned_cols=126 Identities=21% Similarity=0.249 Sum_probs=103.5
Q ss_pred CCCcccccccccccCceeEEcCCCCHHHHHHHHHHCCCCeEEEEcCCCcEEEEEehHhHhhhccccCCCCCCCCcccccc
Q 026495 79 SSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVD 158 (237)
Q Consensus 79 ~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~ 158 (237)
.+..++++++|.+..+++++++++++.+|++.|.+++++.+||+|++|+++|+||.+|+++........
T Consensus 7 ~l~~~~v~~im~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~----------- 75 (157)
T 2emq_A 7 EFMQMTVKPFLIPADKVAHVQPGNYLDHALLVLTKTGYSAIPVLDTSYKLHGLISMTMMMDAILGLERI----------- 75 (157)
T ss_dssp ---CCBSTTTCEEGGGSCCBCTTSBHHHHHHHHHHSSSSEEEEECTTCCEEEEEEHHHHHHHSBCSSSB-----------
T ss_pred hHhhCcHHhhccCCccceEECCCCcHHHHHHHHHHCCceEEEEEcCCCCEEEEeeHHHHHHHHhccccc-----------
Confidence 346779999998533688999999999999999999999999999889999999999999754321000
Q ss_pred cchhhHHHHHHHHHhhcCCccccccccCceEEcCCCCHHHHHHHHHHcCCcEEEEEcCCCcEEEEEEccc
Q 026495 159 STWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGWNYHKRKCSK 228 (237)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~iGvIt~~d 228 (237)
. .......++.++|.++++++++++++.++++.|.++++ +||+|++|+++|+||++|
T Consensus 76 ---~--------~~~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~--l~Vvd~~g~~~Giit~~d 132 (157)
T 2emq_A 76 ---E--------FERLETMKVEEVMNRNIPRLRLDDSLMKAVGLIVNHPF--VCVENDDGYFAGIFTRRE 132 (157)
T ss_dssp ---C--------GGGGGTCBGGGTCBCCCCEEETTSBHHHHHHHHHHSSE--EEEECSSSSEEEEEEHHH
T ss_pred ---c--------hHHhcCCcHHHHhCCCCceecCCCcHHHHHHHHhhCCE--EEEEcCCCeEEEEEEHHH
Confidence 0 00112568999999999999999999999999999987 999998899999999876
No 33
>1o50_A CBS domain-containing predicted protein TM0935; CBS-domain PAIR fold, structural genomics, joint center for structural genomics, JCSG; 1.87A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.78 E-value=1.7e-18 Score=132.68 Aligned_cols=136 Identities=24% Similarity=0.357 Sum_probs=106.5
Q ss_pred CCCCCcccccccccccCceeEEcCCCCHHHHHHHHHHCCCCe-EEEEcCCCcEEEEEehHhHhhhccccCCCCCCCCccc
Q 026495 77 APSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITG-FPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFP 155 (237)
Q Consensus 77 ~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~-~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~ 155 (237)
.......+++++|.+ +++++++++++.+|++.|.+++.+. +||+|++ +++|+||.+||+++..... .....
T Consensus 10 ~~~~~~~~v~~im~~--~~~~v~~~~tl~ea~~~m~~~~~~~~~~Vvd~~-~~vGivt~~dl~~~~~~~~-----~~~~~ 81 (157)
T 1o50_A 10 HHHMKVKDVCKLISL--KPTVVEEDTPIEEIVDRILEDPVTRTVYVARDN-KLVGMIPVMHLLKVSGFHF-----FGFIP 81 (157)
T ss_dssp CTTCBHHHHTTSSCC--CCEEECTTCBHHHHHHHHHHSTTCCEEEEEETT-EEEEEEEHHHHHHHHHHHH-----HCCCC
T ss_pred hhhhccccHhhcccC--CCceECCCCCHHHHHHHHHhCCCCccEEEEECC-EEEEEEEHHHHHHHHhhhH-----Hhhhc
Confidence 345677899999998 8999999999999999999999999 9999987 9999999999997532100 00000
Q ss_pred ccccchhhHHHHHHHHHhhcCCccccccccCceEEcCCCCHHHHHHHHHHcCCcEEEEEcCCCcEEEEEEccc
Q 026495 156 EVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGWNYHKRKCSK 228 (237)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~iGvIt~~d 228 (237)
. ...+..........++.++|.+ ++++++++++.+|++.|.+++++.+||+|++|+++|+||++|
T Consensus 82 ~-------~~~~~~~~~~~~~~~v~~im~~-~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~vGiit~~d 146 (157)
T 1o50_A 82 K-------EELIRSSMKRLIAKNASEIMLD-PVYVHMDTPLEEALKLMIDNNIQEMPVVDEKGEIVGDLNSLE 146 (157)
T ss_dssp --------------CCCCCSSCBHHHHCBC-CCCBCTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHH
T ss_pred c-------HHHHHHHHHHHcCCcHHHHcCC-CeEECCCCCHHHHHHHHHHCCCcEEEEEcCCCEEEEEEEHHH
Confidence 0 0000000001235679999998 999999999999999999999999999998899999999876
No 34
>2uv4_A 5'-AMP-activated protein kinase subunit gamma-1; transferase, CBS domain, lipid synthesis, fatty acid biosynthesis; HET: AMP; 1.33A {Homo sapiens} PDB: 2uv5_A* 2uv6_A* 2uv7_A*
Probab=99.77 E-value=3e-18 Score=130.58 Aligned_cols=122 Identities=24% Similarity=0.325 Sum_probs=103.1
Q ss_pred CCCCCcccccccccccCceeEEcCCCCHHHHHHHHHHCCCCeEEEEcCCCcEEEEEehHhHhhhccccCCCCCCCCcccc
Q 026495 77 APSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPE 156 (237)
Q Consensus 77 ~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~ 156 (237)
...+..++++++ + +++++++++++.+|++.|.+++++.+||+|++|+++|+||.+||++.......
T Consensus 17 ~~~l~~~~v~~~--~--~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~vGivt~~dl~~~~~~~~~---------- 82 (152)
T 2uv4_A 17 SKSLEELQIGTY--A--NIAMVRTTTPVYVALGIFVQHRVSALPVVDEKGRVVDIYSKFDVINLAAEKTY---------- 82 (152)
T ss_dssp TSBHHHHTCSBC--S--SCCCEETTCBHHHHHHHHHHHCCSEEEEECTTSBEEEEEEHHHHHHHHHCSSC----------
T ss_pred HhhHHHccCCcc--C--CceEeCCCCcHHHHHHHHHHcCCceEeEECCCCcEEEEEeHHHHHHHhcchhh----------
Confidence 344567788888 4 68899999999999999999999999999988999999999999875321110
Q ss_pred cccchhhHHHHHHHHHhhcCCccccccc------cCceEEcCCCCHHHHHHHHHHcCCcEEEEEcCCCcEEEEEEccc
Q 026495 157 VDSTWKTFNEVQKLLSKTNGKMVGDLMT------PAPVVVRETTNLEDAARLLLETKYRRLPVVDADGWNYHKRKCSK 228 (237)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~v~~im~------~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~iGvIt~~d 228 (237)
.....++.++|. ++++++.+++++.++++.|.+++.+.+||+|++|+++|+||++|
T Consensus 83 ----------------~~~~~~v~~~m~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~vGiit~~d 144 (152)
T 2uv4_A 83 ----------------NNLDVSVTKALQHRSHYFEGVLKCYLHETLETIINRLVEAEVHRLVVVDENDVVKGIVSLSD 144 (152)
T ss_dssp ----------------CCTTSBGGGGGGTCCHHHHTCSEECTTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHH
T ss_pred ----------------hhhcchHHHHHhhhhcccCCCeEECCCCcHHHHHHHHHHcCCeEEEEECCCCeEEEEEEHHH
Confidence 011357888886 77889999999999999999999999999998899999999876
No 35
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=99.76 E-value=2.7e-18 Score=129.04 Aligned_cols=119 Identities=20% Similarity=0.277 Sum_probs=99.1
Q ss_pred cccccc---cccccCceeEEcCCCCHHHHHHHHHHCCCCeEEEEcCCCcEEEEEehHhHhhhccccCCCCCCCCcccccc
Q 026495 82 VYTVGD---FMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVD 158 (237)
Q Consensus 82 ~~~v~~---im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~ 158 (237)
..++++ +|.+ +++++++++++.+|++.|.+++++.+||+|++|+++|+|+.+|+.+.......
T Consensus 7 ~~~v~~~~~~~~~--~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~------------ 72 (144)
T 2nyc_A 7 KIPIGDLNIITQD--NMKSCQMTTPVIDVIQMLTQGRVSSVPIIDENGYLINVYEAYDVLGLIKGGIY------------ 72 (144)
T ss_dssp GSBGGGSSCCBCS--SCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHHTC--------------
T ss_pred hcchhhcCCCCCC--CceEECCCCcHHHHHHHHHHcCcceeeEEcCCCcEEEEEcHHHHHHHhccccc------------
Confidence 346666 7877 79999999999999999999999999999988999999999999875321100
Q ss_pred cchhhHHHHHHHHHhhcCCcccccccc------CceEEcCCCCHHHHHHHHHHcCCcEEEEEcCCCcEEEEEEccc
Q 026495 159 STWKTFNEVQKLLSKTNGKMVGDLMTP------APVVVRETTNLEDAARLLLETKYRRLPVVDADGWNYHKRKCSK 228 (237)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~v~~im~~------~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~iGvIt~~d 228 (237)
.....++.++|.+ ++.++.+++++.++++.|.+++.+.+||+|++|+++|+||++|
T Consensus 73 --------------~~~~~~v~~~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~g~~~Giit~~d 134 (144)
T 2nyc_A 73 --------------NDLSLSVGEALMRRSDDFEGVYTCTKNDKLSTIMDNIRKARVHRFFVVDDVGRLVGVLTLSD 134 (144)
T ss_dssp ----------------CCSBHHHHHHHCC------CEECTTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHH
T ss_pred --------------ccCCccHHHHHhcCccccCCCeEECCCCcHHHHHHHHHHCCCCEEEEECCCCCEEEEEEHHH
Confidence 0124678888865 5789999999999999999999999999998899999999876
No 36
>1vr9_A CBS domain protein/ACT domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 1.70A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.76 E-value=6.4e-18 Score=136.24 Aligned_cols=113 Identities=26% Similarity=0.274 Sum_probs=102.3
Q ss_pred CcccccccccccCceeEEcCCCCHHHHHHHHHHCCCCeEEEEcCCCcEEEEEehHhHhhhccccCCCCCCCCcccccccc
Q 026495 81 GVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDST 160 (237)
Q Consensus 81 ~~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~~ 160 (237)
...+++++|.+ +++++.+++++.+|++.|.+++++.+||+|++|+++|+||.+|+.+..
T Consensus 11 ~~~~~~~~~~~--~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~l~Givt~~dl~~~~------------------- 69 (213)
T 1vr9_A 11 HHMKVKKWVTQ--DFPMVEESATVRECLHRMRQYQTNECIVKDREGHFRGVVNKEDLLDLD------------------- 69 (213)
T ss_dssp --CBGGGGCBS--CSCEEETTCBHHHHHHHHHHTTSSEEEEECTTSBEEEEEEGGGGTTSC-------------------
T ss_pred cccCHHHhhcC--CCeEECCCCcHHHHHHHHHHCCCCEEEEEcCCCEEEEEEEHHHHHhhc-------------------
Confidence 34578899998 899999999999999999999999999999889999999999998642
Q ss_pred hhhHHHHHHHHHhhcCCccccccccCceEEcCCCCHHHHHHHHHHcCCcEEEEEcCCCcEEEEEEccc
Q 026495 161 WKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGWNYHKRKCSK 228 (237)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~iGvIt~~d 228 (237)
...++.++|.+++.++++++++.+|+++|.+++++.+||+|++|+++|+||.+|
T Consensus 70 --------------~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiit~~D 123 (213)
T 1vr9_A 70 --------------LDSSVFNKVSLPDFFVHEEDNITHALLLFLEHQEPYLPVVDEEMRLKGAVSLHD 123 (213)
T ss_dssp --------------TTSBSGGGCBCTTCCEETTSBHHHHHHHHHHCCCSEEEEECTTCBEEEEEEHHH
T ss_pred --------------CCCcHHHHccCCCEEECCCCcHHHHHHHHHHhCCCEEEEEcCCCEEEEEEEHHH
Confidence 136799999999999999999999999999999999999997799999999876
No 37
>3ddj_A CBS domain-containing protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.80A {Sulfolobus solfataricus} SCOP: d.37.1.1 d.37.1.1
Probab=99.76 E-value=6.8e-18 Score=141.96 Aligned_cols=177 Identities=16% Similarity=0.233 Sum_probs=129.8
Q ss_pred hhccCCEEEEecCccchhHHH-hccCCCceEEecCC-ce-eeeehhhhcccCCCCCcccccccccccCceeEEcCCCCHH
Q 026495 29 FALQLPCLLLSRPGCRVFSVL-ATSSDRVSALRRSS-AV-FASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVD 105 (237)
Q Consensus 29 i~~~v~~li~~~~~~~v~~~~-~~~~~~v~v~~~sp-~~-~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~ 105 (237)
+...+.++....+...+.+.+ ......+++..+.. .. ......+...........+++++|.+ ++.++++++++.
T Consensus 99 m~~~~~~v~~~~~~~~a~~~m~~~~~~~lpVvd~~~~lvGivt~~dl~~~~~~~~~~~~v~~~m~~--~~~~v~~~~~l~ 176 (296)
T 3ddj_A 99 MTPNPVTVYNTSDEFTAINIMVTRNFGSLPVVDINDKPVGIVTEREFLLLYKDLDEIFPVKVFMST--KVQTIYKEVRLD 176 (296)
T ss_dssp SEESCCCEETTSCHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHGGGGGGSCCCCBHHHHSBC--SCCCEETTSBHH
T ss_pred ccCCCEEEcCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHhhhcccccccHHHhhcC--CCeEECCCCCHH
Confidence 444444444333333445555 56667788885332 22 33333333322333456699999988 799999999999
Q ss_pred HHHHHHHHCCCCeEEEEcCCCcEEEEEehHhHhhhccccCCCCCCCCcccccccchhhHHHHHHHHHhhcCCcccccccc
Q 026495 106 EALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTP 185 (237)
Q Consensus 106 ~~~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~ 185 (237)
++++.|.+++.+.+||+|++|+++|+||.+|+++..... +..+.. ......++.++|.+
T Consensus 177 ~~~~~m~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~-------------------~~~~~~--~~~~~~~v~~~m~~ 235 (296)
T 3ddj_A 177 QAVKLMLRRGFRRLPVIDDDNKVVGIVTVVNAIKQLAKA-------------------VDKLDP--DYFYGKVVKDVMVT 235 (296)
T ss_dssp HHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHHH-------------------HHHTCT--HHHHTCBHHHHSBC
T ss_pred HHHHHHHHcCCCEEEEEcCCCEEEEEEEHHHHHHHHHHH-------------------HhhcCh--hhhcCcCHHHHhCC
Confidence 999999999999999999889999999999999753100 000000 01235789999999
Q ss_pred CceEEcCCCCHHHHHHHHHHcCCcEEEEEcCCCcEEEEEEccc
Q 026495 186 APVVVRETTNLEDAARLLLETKYRRLPVVDADGWNYHKRKCSK 228 (237)
Q Consensus 186 ~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~iGvIt~~d 228 (237)
++.++.+++++.+|++.|.+++++.+||+|++|+++|+||++|
T Consensus 236 ~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~~g~~~Giit~~D 278 (296)
T 3ddj_A 236 NLVTIDELASVNRAAAEMIVKRIGSLLILNKDNTIRGIITERD 278 (296)
T ss_dssp CCCBCCTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHH
T ss_pred CCeEECCCCcHHHHHHHHHHcCCCEEEEECCCCeEEEEEcHHH
Confidence 9999999999999999999999999999998899999999876
No 38
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=99.76 E-value=1.7e-18 Score=132.86 Aligned_cols=126 Identities=16% Similarity=0.164 Sum_probs=104.6
Q ss_pred CCCcccccccccccCceeEEcCCCCHHHHHHHHHHCCCCeEEEEcCCCcEEEEEehHhHhhhccccCCCCCCCCcccccc
Q 026495 79 SSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVD 158 (237)
Q Consensus 79 ~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~ 158 (237)
.+..++|+++|.++++++++++++++.+|++.|.+++++.+||+|++|+++|+||.+||++.........
T Consensus 10 ~l~~~~v~~im~~~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~~~lvGivt~~dl~~~~~~~~~~~---------- 79 (159)
T 1yav_A 10 QLLEATVGQFMIEADKVAHVQVGNNLEHALLVLTKTGYTAIPVLDPSYRLHGLIGTNMIMNSIFGLERIE---------- 79 (159)
T ss_dssp -CTTCBHHHHSEEGGGSCCEETTCBHHHHHHHHHHHCCSEEEEECTTCBEEEEEEHHHHHHHHBCSSSBC----------
T ss_pred HHhHhhHHHHhCCccceEEECCCCcHHHHHHHHHhCCCcEEEEECCCCCEEEEeEHHHHHHHhhhhcccc----------
Confidence 4566799999986446889999999999999999999999999998899999999999987543211000
Q ss_pred cchhhHHHHHHHHHhhcCCccccccccCceEEcCCCCHHHHHHHHHHcCCcEEEEEcCCCcEEEEEEccc
Q 026495 159 STWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGWNYHKRKCSK 228 (237)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~iGvIt~~d 228 (237)
.......++.++|.+++.++.+++++.++++.|.++++ +||+|++|+++|+||++|
T Consensus 80 ------------~~~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~--lpVvd~~g~~vGiit~~d 135 (159)
T 1yav_A 80 ------------FEKLDQITVEEVMLTDIPRLHINDPIMKGFGMVINNGF--VCVENDEQVFEGIFTRRV 135 (159)
T ss_dssp ------------GGGTTTSBHHHHSBCSCCEEETTSBHHHHHHHTTTCSE--EEEECTTCBEEEEEEHHH
T ss_pred ------------hhhhccCCHHHhcCCCCceEcCCCCHHHHHHHHHhCCE--EEEEeCCCeEEEEEEHHH
Confidence 00123568999999999999999999999999999876 999998899999999876
No 39
>4fry_A Putative signal-transduction protein with CBS DOM; CBS domain,ssgcid, structural genomics, niaid; HET: NAD AMP; 2.10A {Burkholderia ambifaria}
Probab=99.75 E-value=4.5e-18 Score=130.10 Aligned_cols=118 Identities=22% Similarity=0.326 Sum_probs=101.7
Q ss_pred cccccccccc----CceeEEcCCCCHHHHHHHHHHCCCCeEEEEcCCCcEEEEEehHhHhhhccccCCCCCCCCcccccc
Q 026495 83 YTVGDFMTTK----EELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVD 158 (237)
Q Consensus 83 ~~v~~im~~~----~~~~~v~~~~~l~~~~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~ 158 (237)
.+|+++|.+. .+++++++++++.+|++.|.+++++.+||++ +|+++|+||.+|+++.+...+.
T Consensus 7 ~~v~dim~~~~~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~V~~-~~~~~Givt~~dl~~~~~~~~~------------ 73 (157)
T 4fry_A 7 TTVAQILKAKPDSGRTIYTVTKNDFVYDAIKLMAEKGIGALLVVD-GDDIAGIVTERDYARKVVLQER------------ 73 (157)
T ss_dssp CBHHHHHHHSTTTTCCCCEEETTSBHHHHHHHHHHHTCSEEEEES-SSSEEEEEEHHHHHHHSGGGTC------------
T ss_pred HHHHHHHhcccccCCCCeEECCCCcHHHHHHHHHHcCCCEEEEee-CCEEEEEEEHHHHHHHHHhccC------------
Confidence 4799999863 3579999999999999999999999999965 7999999999999875432111
Q ss_pred cchhhHHHHHHHHHhhcCCccccccccCceEEcCCCCHHHHHHHHHHcCCcEEEEEcCCCcEEEEEEccc
Q 026495 159 STWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGWNYHKRKCSK 228 (237)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~iGvIt~~d 228 (237)
.....++.++|.+++.++.+++++.++++.|.+++++.+||+| +|+++|+||++|
T Consensus 74 --------------~~~~~~v~~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd-~g~~~Giit~~d 128 (157)
T 4fry_A 74 --------------SSKATRVEEIMTAKVRYVEPSQSTDECMALMTEHRMRHLPVLD-GGKLIGLISIGD 128 (157)
T ss_dssp --------------CSSSCBHHHHSBSSCCCBCTTSBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHH
T ss_pred --------------CccccCHHHHcCCCCcEECCCCcHHHHHHHHHHcCCCEEEEEE-CCEEEEEEEHHH
Confidence 0125789999999999999999999999999999999999999 799999999876
No 40
>2j9l_A Chloride channel protein 5; ION channel, ION transport, voltage-gated; HET: ATP; 2.30A {Homo sapiens} SCOP: d.37.1.1 PDB: 2ja3_A*
Probab=99.75 E-value=6.7e-18 Score=132.29 Aligned_cols=142 Identities=18% Similarity=0.216 Sum_probs=104.7
Q ss_pred CCcccccccccccCc--eeEE--cCCCCHHHHHHHHHHCCCCeEEEE--cCCCcEEEEEehHhHhhhccccCCCCC---C
Q 026495 80 SGVYTVGDFMTTKEE--LHVV--KPTTTVDEALEILVEKRITGFPVI--DDDWKLVGLVSDYDLLALDSISGSGRA---D 150 (237)
Q Consensus 80 ~~~~~v~~im~~~~~--~~~v--~~~~~l~~~~~~~~~~~~~~~pVv--d~~~~~~Givt~~dl~~~~~~~~~~~~---~ 150 (237)
+...+|+++|.+..+ ++++ .+++++.+|++.|.+++++.+||+ |++|+++|+||..|+++.......... .
T Consensus 8 ~~~~~v~dim~~~~~~~~~~v~~~~~~~~~~a~~~~~~~~~~~~pVv~~d~~~~lvGiit~~dl~~~~~~~~~~~~~~~~ 87 (185)
T 2j9l_A 8 AHKTLAMDVMKPRRNDPLLTVLTQDSMTVEDVETIISETTYSGFPVVVSRESQRLVGFVLRRDLIISIENARKKQDGVVS 87 (185)
T ss_dssp -CCCBHHHHSBSCTTSCCCCCEESSCEEHHHHHHHHHHCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHHHHTSCSCCCT
T ss_pred hccCcHHHHhcccccCceEEEecCCCccHHHHHHHHHhcCCCceeEEEECCCCeEEEEEEHHHHHHHHHhhcccCCCccc
Confidence 456799999998211 6778 999999999999999999999999 778999999999999875432110000 0
Q ss_pred CCcccccccchhhHHHHHHHHHhhcCCccccccccCceEEcCCCCHHHHHHHHHHcCCcEEEEEcCCCcEEEEEEccc
Q 026495 151 NSMFPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGWNYHKRKCSK 228 (237)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~iGvIt~~d 228 (237)
............. ........++.++|.++++++.+++++.+|++.|.+++.+.+||+| +|+++|+||++|
T Consensus 88 ~~~~~~~~~~~~~------~~~~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd-~g~~vGiit~~d 158 (185)
T 2j9l_A 88 TSIIYFTEHSPPL------PPYTPPTLKLRNILDLSPFTVTDLTPMEIVVDIFRKLGLRQCLVTH-NGRLLGIITKKD 158 (185)
T ss_dssp TCEEECSSSCCCC------CTTCCCCEECGGGEESSCCEEETTSBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHH
T ss_pred cceeecccCCccc------ccccccCccHHHhhCcCCeEeCCCCCHHHHHHHHHhCCCcEEEEEE-CCEEEEEEEHHH
Confidence 0000000000000 0001224679999988899999999999999999999999999999 899999999876
No 41
>2pfi_A Chloride channel protein CLC-Ka; cystathionine beta synthetase (CBS) domains containing protein, transport protein; 1.60A {Homo sapiens}
Probab=99.74 E-value=6.9e-18 Score=129.61 Aligned_cols=123 Identities=18% Similarity=0.282 Sum_probs=101.8
Q ss_pred CCcccccccccccCceeEEcCCCCHHHHHHHHHHCCCCeEEEEcC--CCcEEEEEehHhHhhhccccCCCCCCCCccccc
Q 026495 80 SGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDD--DWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157 (237)
Q Consensus 80 ~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~pVvd~--~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~ 157 (237)
...++|+++|.+ +++++++++++.+|++.|.+++++.+||+|+ +|+++|+||.+||.+.........
T Consensus 10 ~~~~~v~dim~~--~~~~v~~~~~~~~a~~~~~~~~~~~~pVvd~~~~~~~~Givt~~dl~~~~~~~~~~~--------- 78 (164)
T 2pfi_A 10 SHHVRVEHFMNH--SITTLAKDTPLEEVVKVVTSTDVTEYPLVESTESQILVGIVQRAQLVQALQAEPPSR--------- 78 (164)
T ss_dssp CCSCBHHHHCBC--CCCCEETTCBHHHHHHHHHTCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHC--------------
T ss_pred ccCCCHHHHcCC--CCeEECCCCcHHHHHHHHHhCCCCceeEEecCCCCEEEEEEEHHHHHHHHHhhcccc---------
Confidence 456799999998 8999999999999999999999999999996 699999999999987532110000
Q ss_pred ccchhhHHHHHHHHHhhcCCccccccccC------ceEEcCCCCHHHHHHHHHHcCCcEEEEEcCCCcEEEEEEccc
Q 026495 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPA------PVVVRETTNLEDAARLLLETKYRRLPVVDADGWNYHKRKCSK 228 (237)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~v~~im~~~------~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~iGvIt~~d 228 (237)
......++.++|.++ +.++.+++++.++++.|.+++.+.+||+| +|+++|+||++|
T Consensus 79 --------------~~~~~~~v~~~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd-~g~l~Giit~~d 140 (164)
T 2pfi_A 79 --------------APGHQQCLQDILARGCPTEPVTLTLFSETTLHQAQNLFKLLNLQSLFVTS-RGRAVGCVSWVE 140 (164)
T ss_dssp ----------------CCCCBHHHHHHTTCCCBCCCCCEETTCBHHHHHHHHHHTTCSEEEEEE-TTEEEEEEEHHH
T ss_pred --------------CCcccchhhhhhcccccccCCceEECCCCcHHHHHHHHHHhCCCEEEEEE-CCEEEEEEEHHH
Confidence 001134677777665 68899999999999999999999999999 799999999876
No 42
>2oux_A Magnesium transporter; 10001B, structural genomics, PSI-2, P structure initiative, nysgxrc; 2.16A {Enterococcus faecalis} SCOP: a.118.26.1 d.37.1.1
Probab=99.74 E-value=9.3e-18 Score=141.22 Aligned_cols=115 Identities=24% Similarity=0.319 Sum_probs=104.7
Q ss_pred CCCcccccccccccCceeEEcCCCCHHHHHHHHHHC-----CCCeEEEEcCCCcEEEEEehHhHhhhccccCCCCCCCCc
Q 026495 79 SSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEK-----RITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSM 153 (237)
Q Consensus 79 ~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~-----~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~ 153 (237)
.....+|+++|++ +++++++++++.++++.|.++ +++.+||+|++|+++|+||.+|++..
T Consensus 133 ~~~~~~v~~iM~~--~~~~v~~~~tv~ea~~~~~~~~~~~~~~~~~pVvd~~~~lvGivt~~dll~~------------- 197 (286)
T 2oux_A 133 HYEDETAGAIMTT--EFVSIVANQTVRSAMYVLKNQADMAETIYYVYVVDQENHLVGVISLRDLIVN------------- 197 (286)
T ss_dssp TSCTTBHHHHCBS--CCCEECSSSBHHHHHHHHHHHCSSCSCCSEEEEECTTCBEEEEEEHHHHTTS-------------
T ss_pred cCChHHHHHhCCC--CceEECCCCcHHHHHHHHHHcccCccceeEEEEEcCCCeEEEEEEHHHHHcC-------------
Confidence 4467799999998 899999999999999999987 78899999988999999999999853
Q ss_pred ccccccchhhHHHHHHHHHhhcCCccccccccCceEEcCCCCHHHHHHHHHHcCCcEEEEEcCCCcEEEEEEccc
Q 026495 154 FPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGWNYHKRKCSK 228 (237)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~iGvIt~~d 228 (237)
....++.++|.++++++++++++.++++.|.+++.+.+||||++|+++|+||..|
T Consensus 198 --------------------~~~~~v~~im~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIT~~D 252 (286)
T 2oux_A 198 --------------------DDDTLIADILNERVISVHVGDDQEDVAQTIRDYDFLAVPVTDYDDHLLGIVTVDD 252 (286)
T ss_dssp --------------------CTTSBHHHHSBSCCCCEETTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHH
T ss_pred --------------------CCCCcHHHHcCCCCeeecCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHH
Confidence 1246899999998999999999999999999999999999998899999999876
No 43
>3l2b_A Probable manganase-dependent inorganic pyrophosphatase; family II, CBS domain, bateman domain, AP4A, diadenosine polyphosphate, DRTGG; HET: B4P; 2.27A {Clostridium perfringens} PDB: 3l31_A*
Probab=99.74 E-value=1.8e-17 Score=136.14 Aligned_cols=143 Identities=20% Similarity=0.248 Sum_probs=106.5
Q ss_pred cccccccccccCceeEEcCCCCHHHHHHHHHHCCCCeEEEEcCCCcEEEEEehHhHhhhccccCCCC-------------
Q 026495 82 VYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGR------------- 148 (237)
Q Consensus 82 ~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~------------- 148 (237)
..+|+++|.+ +++++++++++.+|++.|.+++++++||+|++|+++|++|..|+++.+.......
T Consensus 6 ~~~v~~im~~--~~~~v~~~~~~~~a~~~m~~~~~~~lpVvd~~~~l~Giit~~di~~~~~~~~~~~~~~~~~~~~~~v~ 83 (245)
T 3l2b_A 6 KLKVEDLEMD--KIAPLAPEVSLKMAWNIMRDKNLKSIPVADGNNHLLGMLSTSNITATYMDIWDSNILAKSATSLDNIL 83 (245)
T ss_dssp CCBGGGSCCB--CCCCBCTTCBHHHHHHHHHHTTCSEEEEECTTCBEEEEEEHHHHHHHHHCCCCTTHHHHTTCCHHHHH
T ss_pred cCcHHHhcCC--CCcEECCCCcHHHHHHHHHHcCCCEEEEEcCCCEEEEEEEHHHHHHHHHHhhhhhhhhhccCCHHHHH
Confidence 4589999998 8999999999999999999999999999998899999999999997653221000
Q ss_pred ------------C----CCCcc------cc------------cccc----------------------------------
Q 026495 149 ------------A----DNSMF------PE------------VDST---------------------------------- 160 (237)
Q Consensus 149 ------------~----~~~~~------~~------------~~~~---------------------------------- 160 (237)
. ...+. .. .++.
T Consensus 84 ~~l~~~~l~~~~~~~~~~g~~~i~a~~~~~~~~~~~~~~ivIvgdr~~~~~~~i~~~~~~liit~~~~~~~~v~~~a~~~ 163 (245)
T 3l2b_A 84 DTLSAEAQNINEERKVFPGKVVVAAMQAESLKEFISEGDIAIAGDRAEIQAELIELKVSLLIVTGGHTPSKEIIELAKKN 163 (245)
T ss_dssp HHTTCEEEECCTTCCCCCSCEEECCSCGGGGGGTCCTTCEEEECSCHHHHHHHHHTTCSEEEECTTCCCCHHHHHHHHHH
T ss_pred HHhCCEEEeccCCcceeeeeEEEEeCChHHHHhcCCCCCEEEECCCHHHHHHHHHcCCCEEEECCCCCCCHHHHHHHHHc
Confidence 0 00000 00 0000
Q ss_pred --------hhhHHHHHHHHHhhcCCccccccc-cCceEEcCCCCHHHHHHHHHHcCCcEEEEEcCCCcEEEEEEcccC
Q 026495 161 --------WKTFNEVQKLLSKTNGKMVGDLMT-PAPVVVRETTNLEDAARLLLETKYRRLPVVDADGWNYHKRKCSKG 229 (237)
Q Consensus 161 --------~~~~~~~~~~~~~~~~~~v~~im~-~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~iGvIt~~d~ 229 (237)
..++.. ... .....+++++|+ +++.++++++++.+++++|.+++++.+||+|++|+++|+||++|-
T Consensus 164 ~~~~i~t~~d~~~~-~~~--~~~~~~v~~im~~~~~~~~~~~~~~~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dl 238 (245)
T 3l2b_A 164 NITVITTPHDSFTA-SRL--IVQSLPVDYVMTKDNLVAVSTDDLVEDVKVTMSETRYSNYPVIDENNKVVGSIARFHL 238 (245)
T ss_dssp TCEEEECSSCHHHH-HHH--GGGGSBHHHHSBCTTCCCEETTSBHHHHHHHHHHHCCSEEEEECTTCBEEEEEECC--
T ss_pred CCeEEEeCCChHHH-HHH--HhcCCceeeEecCCccEEECCCCcHHHHHHHHHhcCCceEEEEcCCCeEEEEEEHHHh
Confidence 000110 000 122467999999 889999999999999999999999999999988999999999873
No 44
>2yvy_A MGTE, Mg2+ transporter MGTE; membrane protein, transport protein; 2.30A {Thermus thermophilus} PDB: 2yvz_A
Probab=99.73 E-value=2.4e-17 Score=138.07 Aligned_cols=113 Identities=31% Similarity=0.410 Sum_probs=103.2
Q ss_pred CcccccccccccCceeEEcCCCCHHHHHHHHHHC-----CCCeEEEEcCCCcEEEEEehHhHhhhccccCCCCCCCCccc
Q 026495 81 GVYTVGDFMTTKEELHVVKPTTTVDEALEILVEK-----RITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFP 155 (237)
Q Consensus 81 ~~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~-----~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~ 155 (237)
...+++++|++ +++++++++++.++++.|.++ ++..+||+|++|+++|+||.+|++..
T Consensus 133 ~~~~v~~iM~~--~~~~v~~~~tv~ea~~~~~~~~~~~~~~~~~~Vvd~~~~lvGivt~~dll~~--------------- 195 (278)
T 2yvy_A 133 EEDEAGGLMTP--EYVAVREGMTVEEVLRFLRRAAPDAETIYYIYVVDEKGRLKGVLSLRDLIVA--------------- 195 (278)
T ss_dssp CTTBGGGTCBS--CCCEECTTSBHHHHHHHHHHHTTTCSCSSEEEEECTTCBEEEEEEHHHHHHS---------------
T ss_pred CcchHHhhcCC--CceEECCCCcHHHHHHHHHHccCCccceeEEEEECCCCCEEEEEEHHHHhcC---------------
Confidence 45689999998 899999999999999999986 78999999988999999999999852
Q ss_pred ccccchhhHHHHHHHHHhhcCCccccccccCceEEcCCCCHHHHHHHHHHcCCcEEEEEcCCCcEEEEEEccc
Q 026495 156 EVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGWNYHKRKCSK 228 (237)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~iGvIt~~d 228 (237)
....++.++|.++++++++++++.++++.|.+++.+.+||||++|+++|+||..|
T Consensus 196 ------------------~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGivT~~D 250 (278)
T 2yvy_A 196 ------------------DPRTRVAEIMNPKVVYVRTDTDQEEVARLMADYDFTVLPVVDEEGRLVGIVTVDD 250 (278)
T ss_dssp ------------------CTTCBSTTTSBSSCCCEETTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHH
T ss_pred ------------------CCCCcHHHHhCCCCeEEeCCCCHHHHHHHHHhcCCCEEEEEeCCCeEEEEEEHHH
Confidence 1246899999888999999999999999999999999999998899999999876
No 45
>3ddj_A CBS domain-containing protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.80A {Sulfolobus solfataricus} SCOP: d.37.1.1 d.37.1.1
Probab=99.73 E-value=8.5e-17 Score=135.24 Aligned_cols=168 Identities=20% Similarity=0.224 Sum_probs=126.2
Q ss_pred hhccCCEEEEecCccchhHHH-hccCCCceEEecCCce-eeeehhhhcccCCC------------CCcccccccccccCc
Q 026495 29 FALQLPCLLLSRPGCRVFSVL-ATSSDRVSALRRSSAV-FASGTLTANSAAPS------------SGVYTVGDFMTTKEE 94 (237)
Q Consensus 29 i~~~v~~li~~~~~~~v~~~~-~~~~~~v~v~~~sp~~-~~~~~~~~~~~~~~------------~~~~~v~~im~~~~~ 94 (237)
+...++++-...+.....+.+ ......+++.. .... ..+...+....... ....+++++|.+ +
T Consensus 26 m~~~~~~v~~~~~v~~a~~~m~~~~~~~~~V~d-~~l~GivT~~Di~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~--~ 102 (296)
T 3ddj_A 26 MIKNPPILSKEDRLGSAFKKINEGGIGRIIVAN-EKIEGLLTTRDLLSTVESYCKDSCSQGDLYHISTTPIIDYMTP--N 102 (296)
T ss_dssp CEESCCEECTTSBHHHHHHHTTGGGCCEEEEES-SSEEEEEEHHHHHGGGTTCC---CCHHHHHHHHTSBGGGTSEE--S
T ss_pred ccCCCcEECCCccHHHHHHHHHHCCCceEEEEC-CeEEEEEeHHHHHHHhcccccccccchhhHHHhcccHHHhccC--C
Confidence 444555443333333334444 45556677776 3222 33333333221110 125689999998 8
Q ss_pred eeEEcCCCCHHHHHHHHHHCCCCeEEEEcCCCcEEEEEehHhHhhhccccCCCCCCCCcccccccchhhHHHHHHHHHhh
Q 026495 95 LHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKT 174 (237)
Q Consensus 95 ~~~v~~~~~l~~~~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (237)
+.++.+++++.++++.|.+++++++||+|++|+++|++|.+|+++.... ..
T Consensus 103 ~~~v~~~~~~~~a~~~m~~~~~~~lpVvd~~~~lvGivt~~dl~~~~~~-----------------------------~~ 153 (296)
T 3ddj_A 103 PVTVYNTSDEFTAINIMVTRNFGSLPVVDINDKPVGIVTEREFLLLYKD-----------------------------LD 153 (296)
T ss_dssp CCCEETTSCHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHGGGGGG-----------------------------SC
T ss_pred CEEEcCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHhhhc-----------------------------cc
Confidence 9999999999999999999999999999988999999999999975321 11
Q ss_pred cCCccccccccCceEEcCCCCHHHHHHHHHHcCCcEEEEEcCCCcEEEEEEccc
Q 026495 175 NGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGWNYHKRKCSK 228 (237)
Q Consensus 175 ~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~iGvIt~~d 228 (237)
...++.++|.+++.++.+++++.++++.|.+++++.+||+|++|+++|+||.+|
T Consensus 154 ~~~~v~~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~~~~~Givt~~d 207 (296)
T 3ddj_A 154 EIFPVKVFMSTKVQTIYKEVRLDQAVKLMLRRGFRRLPVIDDDNKVVGIVTVVN 207 (296)
T ss_dssp CCCBHHHHSBCSCCCEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHH
T ss_pred ccccHHHhhcCCCeEECCCCCHHHHHHHHHHcCCCEEEEEcCCCEEEEEEEHHH
Confidence 245899999989999999999999999999999999999998899999999876
No 46
>2d4z_A Chloride channel protein; CLC chloride channel cytoplasmic domain, CBS domains, ION CH regulatory subunit, transport protein; 3.10A {Torpedo marmorata} SCOP: d.37.1.1
Probab=99.72 E-value=4.6e-17 Score=134.25 Aligned_cols=147 Identities=19% Similarity=0.209 Sum_probs=106.6
Q ss_pred CCCcccccccccccCceeEEcCCCCHHHHHHHHHHCCCCeEEEEcCC--CcEEEEEehHhHhhhccccC--CCC---C--
Q 026495 79 SSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDD--WKLVGLVSDYDLLALDSISG--SGR---A-- 149 (237)
Q Consensus 79 ~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~pVvd~~--~~~~Givt~~dl~~~~~~~~--~~~---~-- 149 (237)
....++|+++|++ +++++.+++++.+|.++|.+++++.+||||++ ++++|+|+..||++++.... ... .
T Consensus 9 ~~~~~~v~diMt~--~vvtv~~~~tv~~~~~lm~~~~~~~~PVVd~~~~~~LvGiIt~~dl~~~l~~~~~~~~~~~~~~~ 86 (250)
T 2d4z_A 9 NKYNIQVGDIMVR--DVTSIASTSTYGDLLHVLRQTKLKFFPFVDTPDTNTLLGSIDRTEVEGLLQRRISAYRRQPAAAA 86 (250)
T ss_dssp CCSSCBTTSSSBS--SCCCEETTCBHHHHHHHHHHCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHHHHHTTSSSCCCCC
T ss_pred ccCCCChHHhcCC--CCeEECCCCCHHHHHHHHHhcCCCEEEEEecCCCCeEEEEEEHHHHHHHHHHhhhhhhhhhhhhh
Confidence 4567899999999 89999999999999999999999999999964 68999999999987543210 000 0
Q ss_pred ------------------CCCc--ccc-c---------------------------------------------------
Q 026495 150 ------------------DNSM--FPE-V--------------------------------------------------- 157 (237)
Q Consensus 150 ------------------~~~~--~~~-~--------------------------------------------------- 157 (237)
.+.. +.. .
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (250)
T 2d4z_A 87 EADEEGRNGETGASFTGEAESSFAYIDQEDAEGQQREGLEAVKVQTEDPRPPSPVPAEEPTQTSGIYQKKQKGTGQVASR 166 (250)
T ss_dssp CBCCC---------------------------------------------------------------------------
T ss_pred cccccccccccccccccCCcceeeeccccccccccccCccccCCcccCCccccccccccccccccccccccccccccCcc
Confidence 0000 000 0
Q ss_pred ccchhhHHHHHHHHHhhcCCcc--c-cccccCceEEcCCCCHHHHHHHHHHcCCcEEEEEcCCCcEEEEEEccc
Q 026495 158 DSTWKTFNEVQKLLSKTNGKMV--G-DLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGWNYHKRKCSK 228 (237)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~v--~-~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~iGvIt~~d 228 (237)
....-...+...+.......+| . .+|++.+++|.++++|.++..+|...|++++||++ +|+++|+||++|
T Consensus 167 ~~~~i~~~~~~~~~~~~l~~~Vdl~~~~md~sP~tv~~~tsL~~v~~LF~~lglr~l~V~~-~GrLVGIVTrkD 239 (250)
T 2d4z_A 167 FEEMLTLEEIYRWEQREKNVVVNFETCRIDQSPFQLVEGTSLQKTHTLFSLLGLDRAYVTS-MGKLVGVVALAE 239 (250)
T ss_dssp CCSCCBHHHHHHHHHHHTTCBCCTTSSCEECCSCCBCTTCBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHH
T ss_pred cccccChhhhhhHHHHhcCceeccccccccCCCeEECCCCcHHHHHHHHHHhCCeEEEEEE-CCEEEEEEEHHH
Confidence 0000011111222222234455 3 47999999999999999999999999999999998 799999999987
No 47
>2yzq_A Putative uncharacterized protein PH1780; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; HET: SAM; 1.63A {Pyrococcus horikoshii} SCOP: d.37.1.1 d.37.1.1
Probab=99.72 E-value=7e-17 Score=134.55 Aligned_cols=195 Identities=16% Similarity=0.144 Sum_probs=124.5
Q ss_pred cCCEEEEecCccchhHHH-hccCCCceEEecC-Cc-eeeeehhhhc-ccCC--CCCcccccccccccCceeEEcCCCCHH
Q 026495 32 QLPCLLLSRPGCRVFSVL-ATSSDRVSALRRS-SA-VFASGTLTAN-SAAP--SSGVYTVGDFMTTKEELHVVKPTTTVD 105 (237)
Q Consensus 32 ~v~~li~~~~~~~v~~~~-~~~~~~v~v~~~s-p~-~~~~~~~~~~-~~~~--~~~~~~v~~im~~~~~~~~v~~~~~l~ 105 (237)
.+..+....+...+.+.+ ......+++..+. .. .......+.. .... .....+++++|.+ ++.++++++++.
T Consensus 69 ~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~~~~~Giit~~di~~~~~~~~~~~~~~~v~~~m~~--~~~~v~~~~~l~ 146 (282)
T 2yzq_A 69 DVPVVKENDTLKKAAKLMLEYDYRRVVVVDSKGKPVGILTVGDIIRRYFAKSEKYKGVEIEPYYQR--YVSIVWEGTPLK 146 (282)
T ss_dssp CCCEEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHTTTTCSGGGGCBSTTTSBS--CCCCEETTSBHH
T ss_pred CCcEECCCCcHHHHHHHHHHcCCCEEEEEcCCCEEEEEEEHHHHHHHHHhccCCcccCcHHHHhCC--CCEEECCCCCHH
Confidence 344433333344445555 5556677887643 22 2323332222 2221 2346789999987 789999999999
Q ss_pred HHHHHHHHCCCCeEEEEcCCCcEEEEEehHhHhhhccccCCCCC-CCCcccccccc-hhhHHHHH-HHHHhhcCCccccc
Q 026495 106 EALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRA-DNSMFPEVDST-WKTFNEVQ-KLLSKTNGKMVGDL 182 (237)
Q Consensus 106 ~~~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~v~~i 182 (237)
++++.|.+++.+.+||+|++|+++|++|..|+++.......... .....+...+. ........ .........+++++
T Consensus 147 ~~~~~~~~~~~~~l~Vvd~~~~~~Giit~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i 226 (282)
T 2yzq_A 147 AALKALLLSNSMALPVVDSEGNLVGIVDETDLLRDSEIVRIMKSTELAASSEEEWILESHPTLLFEKFELQLPNKPVAEI 226 (282)
T ss_dssp HHHHHHHTCSSSEEEEECTTSCEEEEEEGGGGGGCGGGCC--------------------------------CCCBGGGT
T ss_pred HHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHhhhhhhhhhhccchhhhhhhhhhhcccchHHHHhHhhhhhccCCHHHh
Confidence 99999999999999999988999999999999842110000000 00000000000 00000000 00011235789999
Q ss_pred cccCceEEcCCCCHHHHHHHHHHcCCcEEEEEcCCCcEEEEEEccc
Q 026495 183 MTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGWNYHKRKCSK 228 (237)
Q Consensus 183 m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~iGvIt~~d 228 (237)
|.+++.++.+++++.+|+++|.+++++++||+|++|+++|+||++|
T Consensus 227 m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~lvGiit~~D 272 (282)
T 2yzq_A 227 MTRDVIVATPHMTVHEVALKMAKYSIEQLPVIRGEGDLIGLIRDFD 272 (282)
T ss_dssp CBSSCCCBCTTSBHHHHHHHHHHHTCSEEEEEETTTEEEEEEEHHH
T ss_pred cCCCCceeCCCCCHHHHHHHHHHcCcceeEEECCCCCEEEEEeHHH
Confidence 9999999999999999999999999999999997789999999876
No 48
>3kh5_A Protein MJ1225; AMPK, AMP, ADP, ATP, CBS domain, archaea, unknown function; HET: ADP AMP; 2.10A {Methanocaldococcus jannaschii} PDB: 3lfz_A*
Probab=99.72 E-value=2.9e-17 Score=136.49 Aligned_cols=180 Identities=14% Similarity=0.222 Sum_probs=126.2
Q ss_pred hhccCCEEEEecCccchhHHH-hccCCCceEEecCCc-e-eeeehhhhcc-cCCCCCcccccccccccCceeEEcCCCCH
Q 026495 29 FALQLPCLLLSRPGCRVFSVL-ATSSDRVSALRRSSA-V-FASGTLTANS-AAPSSGVYTVGDFMTTKEELHVVKPTTTV 104 (237)
Q Consensus 29 i~~~v~~li~~~~~~~v~~~~-~~~~~~v~v~~~sp~-~-~~~~~~~~~~-~~~~~~~~~v~~im~~~~~~~~v~~~~~l 104 (237)
+...+.++....+..++.+.+ ......+++..+... . ......+... ........+++++|.+ ++.++++++++
T Consensus 90 m~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~~~~~v~~~m~~--~~~~v~~~~~l 167 (280)
T 3kh5_A 90 MEENVITLKENADIDEAIETFLTKNVGGAPIVNDENQLISLITERDVIRALLDKIDENEVIDDYITR--DVIVATPGERL 167 (280)
T ss_dssp SBCSCCCEETTCBHHHHHHHHHHTTCSEEEEECTTCBEEEEEEHHHHHHHHGGGSCTTCBSGGGCBC--SCCCBCTTCBH
T ss_pred cCCCCEEECCCCCHHHHHHHHHhCCCCEEEEEcCCCEEEEEEEHHHHHHHHhhcCCCCCCHHHHhCC--CCeEECCCCcH
Confidence 444444444333334455555 555667788753321 1 3333332221 1122234589999988 79999999999
Q ss_pred HHHHHHHHHCCCCeEEEEcCCCcEEEEEehHhHhhhccccCCCCCCCCcccccccchhhHHHHHH-HHHhhcCCcccccc
Q 026495 105 DEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQK-LLSKTNGKMVGDLM 183 (237)
Q Consensus 105 ~~~~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~~im 183 (237)
.++++.|.+++.+.+||+ ++|+++|+||.+|+++...... .+..+.. ........++.++|
T Consensus 168 ~~~~~~~~~~~~~~~~Vv-~~~~~~Givt~~dl~~~~~~~~-----------------~~~~~~~~~~~~~~~~~v~~~m 229 (280)
T 3kh5_A 168 KDVARTMVRNGFRRLPVV-SEGRLVGIITSTDFIKLLGSDW-----------------AFNHMQTGNVREITNVRMEEIM 229 (280)
T ss_dssp HHHHHHHHHHTCSEEEEE-ETTEEEEEEEHHHHHHHHTSHH-----------------HHHHHHSCCTHHHHHCBHHHHS
T ss_pred HHHHHHHHHcCCCEEEEE-ECCEEEEEEEHHHHHHHHhhhh-----------------hhhhhcccchhhhhCCcHHHHh
Confidence 999999999999999999 5799999999999997532100 0000000 00011246899999
Q ss_pred ccCceEEcCCCCHHHHHHHHHHcCCcEEEEEcCCCcEEEEEEccc
Q 026495 184 TPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGWNYHKRKCSK 228 (237)
Q Consensus 184 ~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~iGvIt~~d 228 (237)
.+++.++++++++.+|++.|.+++++++||+|++|+++|+||++|
T Consensus 230 ~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~~g~~~Givt~~d 274 (280)
T 3kh5_A 230 KRDVITAKEGDKLKKIAEIMVTNDIGALPVVDENLRIKGIITEKD 274 (280)
T ss_dssp BSSCCCBCTTCBHHHHHHHHHHHTCCEEEEECTTCBEEEEEEHHH
T ss_pred cCCCEEECCCCCHHHHHHHHHHCCCCEEEEECCCCeEEEEEeHHH
Confidence 999999999999999999999999999999998889999999876
No 49
>2yzq_A Putative uncharacterized protein PH1780; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; HET: SAM; 1.63A {Pyrococcus horikoshii} SCOP: d.37.1.1 d.37.1.1
Probab=99.71 E-value=2.3e-16 Score=131.35 Aligned_cols=120 Identities=23% Similarity=0.237 Sum_probs=100.3
Q ss_pred CcccccccccccCceeEEcCCCCHHHHHHHHHHCCCCeEEEEcCCCcEEEEEehHhHhh-hccccCCCCCCCCccccccc
Q 026495 81 GVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA-LDSISGSGRADNSMFPEVDS 159 (237)
Q Consensus 81 ~~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~-~~~~~~~~~~~~~~~~~~~~ 159 (237)
...+++++|.+ ++.++++++++.++++.|.+++.+.+||+|++|+++|++|.+|+.+ ......
T Consensus 58 ~~~~v~~~m~~--~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~~~~~Giit~~di~~~~~~~~~-------------- 121 (282)
T 2yzq_A 58 DEEQLAMLVKR--DVPVVKENDTLKKAAKLMLEYDYRRVVVVDSKGKPVGILTVGDIIRRYFAKSE-------------- 121 (282)
T ss_dssp ------CCCBS--CCCEEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHTTTTCS--------------
T ss_pred ccCCHHHHcCC--CCcEECCCCcHHHHHHHHHHcCCCEEEEEcCCCEEEEEEEHHHHHHHHHhccC--------------
Confidence 45689999998 7899999999999999999999999999998899999999999987 532110
Q ss_pred chhhHHHHHHHHHhhcCCccccccccCceEEcCCCCHHHHHHHHHHcCCcEEEEEcCCCcEEEEEEcccC
Q 026495 160 TWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGWNYHKRKCSKG 229 (237)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~iGvIt~~d~ 229 (237)
.....++.++|.+++.++++++++.++++.|.+++++.+||+|++|+++|+||.+|-
T Consensus 122 -------------~~~~~~v~~~m~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~~~~~Giit~~dl 178 (282)
T 2yzq_A 122 -------------KYKGVEIEPYYQRYVSIVWEGTPLKAALKALLLSNSMALPVVDSEGNLVGIVDETDL 178 (282)
T ss_dssp -------------GGGGCBSTTTSBSCCCCEETTSBHHHHHHHHHTCSSSEEEEECTTSCEEEEEEGGGG
T ss_pred -------------CcccCcHHHHhCCCCEEECCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHH
Confidence 011457889998889999999999999999999999999999988999999998774
No 50
>3kh5_A Protein MJ1225; AMPK, AMP, ADP, ATP, CBS domain, archaea, unknown function; HET: ADP AMP; 2.10A {Methanocaldococcus jannaschii} PDB: 3lfz_A*
Probab=99.70 E-value=1.8e-16 Score=131.74 Aligned_cols=116 Identities=24% Similarity=0.435 Sum_probs=102.7
Q ss_pred cccccccccccCceeEEcCCCCHHHHHHHHHHCCCCeEEEEcCCCcEEEEEehHhHhhhccccCCCCCCCCcccccccch
Q 026495 82 VYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTW 161 (237)
Q Consensus 82 ~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~~~ 161 (237)
..+++++|.+ ++.++++++++.++++.|.+++++++||+|++|+++|++|.+|+++.+...
T Consensus 83 ~~~v~~im~~--~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~----------------- 143 (280)
T 3kh5_A 83 NEPVREIMEE--NVITLKENADIDEAIETFLTKNVGGAPIVNDENQLISLITERDVIRALLDK----------------- 143 (280)
T ss_dssp TSBGGGTSBC--SCCCEETTCBHHHHHHHHHHTTCSEEEEECTTCBEEEEEEHHHHHHHHGGG-----------------
T ss_pred hhhHHHhcCC--CCEEECCCCCHHHHHHHHHhCCCCEEEEEcCCCEEEEEEEHHHHHHHHhhc-----------------
Confidence 4589999998 899999999999999999999999999999899999999999998753211
Q ss_pred hhHHHHHHHHHhhcCCccccccccCceEEcCCCCHHHHHHHHHHcCCcEEEEEcCCCcEEEEEEccc
Q 026495 162 KTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGWNYHKRKCSK 228 (237)
Q Consensus 162 ~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~iGvIt~~d 228 (237)
.....++.++|.+++.++++++++.++++.|.+++++.+||++ +|+++|+||.+|
T Consensus 144 -----------~~~~~~v~~~m~~~~~~v~~~~~l~~~~~~~~~~~~~~~~Vv~-~~~~~Givt~~d 198 (280)
T 3kh5_A 144 -----------IDENEVIDDYITRDVIVATPGERLKDVARTMVRNGFRRLPVVS-EGRLVGIITSTD 198 (280)
T ss_dssp -----------SCTTCBSGGGCBCSCCCBCTTCBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHH
T ss_pred -----------CCCCCCHHHHhCCCCeEECCCCcHHHHHHHHHHcCCCEEEEEE-CCEEEEEEEHHH
Confidence 0123478999999999999999999999999999999999994 899999999876
No 51
>3t4n_C Nuclear protein SNF4; CBS domain, nucleotide binding, cytosol, protein binding; HET: ADP; 2.30A {Saccharomyces cerevisiae} PDB: 3tdh_C* 3te5_C* 2qlv_C
Probab=99.70 E-value=8.4e-17 Score=136.89 Aligned_cols=120 Identities=20% Similarity=0.285 Sum_probs=104.4
Q ss_pred Cccccccc---ccccCceeEEcCCCCHHHHHHHHHHCCCCeEEEEcCCCcEEEEEehHhHhhhccccCCCCCCCCccccc
Q 026495 81 GVYTVGDF---MTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157 (237)
Q Consensus 81 ~~~~v~~i---m~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~ 157 (237)
...+++++ |.+ ++.++.+++++.++++.|.+++++.+||+|++|+++|+||.+|+++++...
T Consensus 185 ~~~~v~~~~~~m~~--~~~~v~~~~~~~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dl~~~~~~~------------- 249 (323)
T 3t4n_C 185 LKIPIGDLNIITQD--NMKSCQMTTPVIDVIQMLTQGRVSSVPIIDENGYLINVYEAYDVLGLIKGG------------- 249 (323)
T ss_dssp CCSBGGGTTCSBCT--TCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEETTHHHHHHHTT-------------
T ss_pred hhCcHHHcCCCCCC--CcEEECCCCcHHHHHHHHHHcCCCEEEEECCCCeEEEEEeHHHHHHHHhhc-------------
Confidence 44588999 877 799999999999999999999999999999889999999999999753210
Q ss_pred ccchhhHHHHHHHHHhhcCCcccccccc------CceEEcCCCCHHHHHHHHHHcCCcEEEEEcCCCcEEEEEEccc
Q 026495 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTP------APVVVRETTNLEDAARLLLETKYRRLPVVDADGWNYHKRKCSK 228 (237)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~v~~im~~------~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~iGvIt~~d 228 (237)
.......++.++|.+ ++.++.+++++.++++.|.+++++.+||+|++|+++|+||.+|
T Consensus 250 -------------~~~~~~~~v~~~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~~~l~Giit~~D 313 (323)
T 3t4n_C 250 -------------IYNDLSLSVGEALMRRSDDFEGVYTCTKNDKLSTIMDNIRKARVHRFFVVDDVGRLVGVLTLSD 313 (323)
T ss_dssp -------------HHHHTTSBHHHHGGGSCTTCCCCEEECTTCBHHHHHHHHHHSCCCEEEEECTTSBEEEEEEHHH
T ss_pred -------------hhhhccCCHHHHHhhccccCCCCEEECCCCCHHHHHHHHHHhCCCEEEEECCCCcEEEEEEHHH
Confidence 001235689999987 7899999999999999999999999999998899999999876
No 52
>3org_A CMCLC; transporter, transport protein; 3.50A {Cyanidioschyzon merolae}
Probab=99.69 E-value=4.7e-17 Score=150.67 Aligned_cols=148 Identities=15% Similarity=0.065 Sum_probs=104.4
Q ss_pred CCcccccccccccCceeEEcCCCCHHHHHHHHH-HCCCCeEEEEcCCCcEEEEEehHhHhhhccccCCCCCCC----Ccc
Q 026495 80 SGVYTVGDFMTTKEELHVVKPTTTVDEALEILV-EKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADN----SMF 154 (237)
Q Consensus 80 ~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~-~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~----~~~ 154 (237)
..+++|+|+|++++++++++++++++|+.+.|. +++++.+||+|++|+++|+||.+|+.+...........+ ...
T Consensus 450 ~~~~~V~diM~p~~~v~~v~~~~t~~e~~~~~~~~~~~~~~PVvd~~~~lvGiVt~~DL~~~l~~~~~~~~~~~~~~~~~ 529 (632)
T 3org_A 450 SPEMTAREIMHPIEGEPHLFPDSEPQHIKGILEKFPNRLVFPVIDANGYLLGAISRKEIVDRLQHVLEDVPEPIAGHRTL 529 (632)
T ss_dssp CTTSBHHHHCBCTTTSCCBCSSSCHHHHHHHHHHSTTCCEECBBCTTCBBCCEESHHHHTTTTTTC--------------
T ss_pred cccCcHHHHhhcCCCceEecCCCcHHHHHHHHHhcCCcceEEEEecCCeEEEEEEHHHHHHHHHHHhhhcccccccccce
Confidence 367899999995548999999999999999999 799999999998899999999999997653321100000 000
Q ss_pred cccccchhhHHHHHHHHHh-----------------hcCCccccccccCceEEcCCCCHHHHHHHHHHcCCcEEEEEcCC
Q 026495 155 PEVDSTWKTFNEVQKLLSK-----------------TNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD 217 (237)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~-----------------~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~ 217 (237)
... +..+..+........ ....+++++|++++.++++++++.++++.|.+++.+++||+ ++
T Consensus 530 ~~~-~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~v~~iMt~~pitV~~~~~l~ea~~~M~~~~i~~lpVv-e~ 607 (632)
T 3org_A 530 VLL-DAADLSENIEGLVDETPSGEHSSKGKRTATVLEPTSSLVVPCDVSPIVVTSYSLVRQLHFLFVMLMPSMIYVT-ER 607 (632)
T ss_dssp ------------------------------------------CCSCCCCCCEEETTCBHHHHHHHHHHTCCSEEEEE-ET
T ss_pred ecc-CHHHHHhhcccCCCCCcccchhhhcccceEeeccccccchhhcCCCceecCCCcHHHHHHHHHhcCCCEEEEE-EC
Confidence 000 000000000000000 11224889999999999999999999999999999999999 58
Q ss_pred CcEEEEEEcccC
Q 026495 218 GWNYHKRKCSKG 229 (237)
Q Consensus 218 ~~~iGvIt~~d~ 229 (237)
|+++|+||++|=
T Consensus 608 G~lvGIVT~~Dl 619 (632)
T 3org_A 608 GKLVGIVEREDV 619 (632)
T ss_dssp TEEEEEEEGGGT
T ss_pred CEEEEEEehhhH
Confidence 999999999983
No 53
>2zy9_A Mg2+ transporter MGTE; membrane protien, metal transport; 2.94A {Thermus thermophilus} PDB: 2yvx_A
Probab=99.68 E-value=2.2e-16 Score=141.50 Aligned_cols=115 Identities=30% Similarity=0.397 Sum_probs=104.1
Q ss_pred CCCcccccccccccCceeEEcCCCCHHHHHHHHHHC-----CCCeEEEEcCCCcEEEEEehHhHhhhccccCCCCCCCCc
Q 026495 79 SSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEK-----RITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSM 153 (237)
Q Consensus 79 ~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~-----~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~ 153 (237)
.....+++++|++ +++++++++++.++++.|.++ +++.+||+|++++++|+||.+|++..
T Consensus 151 ~~~~~~v~~iM~~--~~v~v~~~~tv~ea~~~~~~~~~~~~~~~~ipVvd~~~~lvGiVt~~Dll~~------------- 215 (473)
T 2zy9_A 151 RYEEDEAGGLMTP--EYVAVREGMTVEEVLRFLRRAAPDAETIYYIYVVDEKGRLKGVLSLRDLIVA------------- 215 (473)
T ss_dssp TSCTTBSTTTCBS--CEEEECTTCBHHHHHHHHHHHGGGCSEEEEEEEECTTSBEEEEEEHHHHHHS-------------
T ss_pred cCCCCCHHHhCCC--CceEeCCCCcHHHHHHHHHhccCCcCceeEEEEECCCCcEEEEEEHHHHhcC-------------
Confidence 3456789999998 899999999999999999986 57899999988999999999999852
Q ss_pred ccccccchhhHHHHHHHHHhhcCCccccccccCceEEcCCCCHHHHHHHHHHcCCcEEEEEcCCCcEEEEEEccc
Q 026495 154 FPEVDSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGWNYHKRKCSK 228 (237)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~iGvIt~~d 228 (237)
..+.+++++|++++.++++++++.++++.|.+++.+.+||||++|+++|+||.+|
T Consensus 216 --------------------~~~~~v~dim~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVDe~g~lvGiIT~~D 270 (473)
T 2zy9_A 216 --------------------DPRTRVAEIMNPKVVYVRTDTDQEEVARLMADYDFTVLPVVDEEGRLVGIVTVDD 270 (473)
T ss_dssp --------------------CTTSBGGGTSBSSCCCEESSSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHH
T ss_pred --------------------CCCCcHHHHhCCCCeEEeCCCcHHHHHHHHHhcCCcEEEEEcCCCEEEEEEehHh
Confidence 1257899999988999999999999999999999999999999999999999876
No 54
>2qrd_G Protein C1556.08C; AMPK, ADP, ATP-binding, kinase, nucleotide-binding, serine/T protein kinase, transferase, CBS domain; HET: ADP ATP; 2.41A {Schizosaccharomyces pombe} PDB: 2qrc_G* 2qr1_G* 2qre_G* 2oox_G* 2ooy_G*
Probab=99.65 E-value=9e-16 Score=131.08 Aligned_cols=119 Identities=18% Similarity=0.189 Sum_probs=101.6
Q ss_pred cccccc---cccccCceeEEcCCCCHHHHHHHHHHCCCCeEEEEcCCCcEEEEEehHhHhhhccccCCCCCCCCcccccc
Q 026495 82 VYTVGD---FMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVD 158 (237)
Q Consensus 82 ~~~v~~---im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~ 158 (237)
..++++ +|.+ ++.++++++++.++++.|.+++.+.+||+|++|+++|+||.+|+++.......
T Consensus 181 ~~~v~~l~~~m~~--~~~~v~~~~~~~~~~~~m~~~~~~~~~Vvd~~~~~~Giit~~dl~~~~~~~~~------------ 246 (334)
T 2qrd_G 181 RVPLNQMTIGTWS--NLATASMETKVYDVIKMLAEKNISAVPIVNSEGTLLNVYESVDVMHLIQDGDY------------ 246 (334)
T ss_dssp CCBGGGSSCSBCS--SCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEETHHHHHHHTTSCG------------
T ss_pred hCcHHHhCCcccC--CceEECCCCcHHHHHHHHHHcCCcEEEEEcCCCcEEEEEEHHHHHHHhhcccc------------
Confidence 457888 4877 78999999999999999999999999999988999999999999975321100
Q ss_pred cchhhHHHHHHHHHhhcCCcccccccc------CceEEcCCCCHHHHHHHHHHcCCcEEEEEcCCCcEEEEEEccc
Q 026495 159 STWKTFNEVQKLLSKTNGKMVGDLMTP------APVVVRETTNLEDAARLLLETKYRRLPVVDADGWNYHKRKCSK 228 (237)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~v~~im~~------~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~iGvIt~~d 228 (237)
.....++.++|.+ +++++++++++.++++.|.+++++.+||+|++|+++|+||++|
T Consensus 247 --------------~~~~~~v~~~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~g~l~Giit~~d 308 (334)
T 2qrd_G 247 --------------SNLDLSVGEALLKRPANFDGVHTCRATDRLDGIFDAIKHSRVHRLFVVDENLKLEGILSLAD 308 (334)
T ss_dssp --------------GGGGSBHHHHHTTCCTTCCCCCEECTTCBHHHHHHHHHHSCCCEEEEECTTCBEEEEEEHHH
T ss_pred --------------ccccCcHHHHHhcccccCCCCEEECCCCcHHHHHHHHHHcCCCEEEEECCCCeEEEEEeHHH
Confidence 0124578888874 7889999999999999999999999999998899999999876
No 55
>2v8q_E 5'-AMP-activated protein kinase subunit gamma-1; phosphorylation, nucleotide-binding, serine/threonine-protei kinase, magnesium, CBS domain; HET: AMP; 2.10A {Rattus norvegicus} SCOP: d.37.1.1 d.37.1.1 PDB: 2v92_E* 2v9j_E* 2y8l_E* 2y8q_E* 2y94_E* 2ya3_E*
Probab=99.62 E-value=2.4e-15 Score=128.28 Aligned_cols=109 Identities=25% Similarity=0.309 Sum_probs=93.4
Q ss_pred ceeEEcCCCCHHHHHHHHHHCCCCeEEEEcCCCcEEEEEehHhHhhhccccCCCCCCCCcccccccchhhHHHHHHHHHh
Q 026495 94 ELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSK 173 (237)
Q Consensus 94 ~~~~v~~~~~l~~~~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (237)
++.++.+++++.++++.|.+++.+.+||+|++|+++|+||.+|+++........
T Consensus 202 ~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~~~l~Giit~~dl~~~~~~~~~~-------------------------- 255 (330)
T 2v8q_E 202 NIAMVRTTTPVYVALGIFVQHRVSALPVVDEKGRVVDIYSKFDVINLAAEKTYN-------------------------- 255 (330)
T ss_dssp SCCCEETTCBHHHHHHHHHHHCCSEEEEECTTSBEEEEEEGGGTGGGGGSSCCC--------------------------
T ss_pred CceEECCCCCHHHHHHHHHHcCCCeEEEECCCCcEEEEEEHHHHHHHHhccccc--------------------------
Confidence 688999999999999999999999999999889999999999999764322110
Q ss_pred hcCCcccccc------ccCceEEcCCCCHHHHHHHHHHcCCcEEEEEcCCCcEEEEEEccc
Q 026495 174 TNGKMVGDLM------TPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGWNYHKRKCSK 228 (237)
Q Consensus 174 ~~~~~v~~im------~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~iGvIt~~d 228 (237)
....++.++| .+++.++.+++++.++++.|.+++++++||+|++|+++|+||.+|
T Consensus 256 ~~~~~v~~~~~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~~g~l~Giit~~D 316 (330)
T 2v8q_E 256 NLDVSVTKALQHRSHYFEGVLKCYLHETLEAIINRLVEAEVHRLVVVDEHDVVKGIVSLSD 316 (330)
T ss_dssp CCSSBHHHHGGGCCSCCCSCCEECTTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHH
T ss_pred cccCcHHHHHhccccccCCCeEECCCCcHHHHHHHHHHCCCcEEEEEcCCCcEEEEEeHHH
Confidence 0124566666 478899999999999999999999999999998899999999876
No 56
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=99.62 E-value=7.9e-16 Score=139.75 Aligned_cols=118 Identities=16% Similarity=0.179 Sum_probs=101.6
Q ss_pred CCcccccccccccCceeEEcCC-CCHHHHHHHHHHCCCCeEEEEc-CCCcEEEEEehHhHhhhccccCCCCCCCCccccc
Q 026495 80 SGVYTVGDFMTTKEELHVVKPT-TTVDEALEILVEKRITGFPVID-DDWKLVGLVSDYDLLALDSISGSGRADNSMFPEV 157 (237)
Q Consensus 80 ~~~~~v~~im~~~~~~~~v~~~-~~l~~~~~~~~~~~~~~~pVvd-~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~ 157 (237)
+...+|+++|.+ +++++.++ +++.+++++|.+++++++||+| ++|+++|+||.+||++.+...
T Consensus 381 l~~~~V~diM~~--~~vtv~~~~~tv~ea~~~m~~~~~~~lpVvd~~~g~lvGiVt~~Dll~~l~~~------------- 445 (527)
T 3pc3_A 381 WWSLAIAELELP--APPVILKSDATVGEAIALMKKHRVDQLPVVDQDDGSVLGVVGQETLITQIVSM------------- 445 (527)
T ss_dssp TTTSBGGGGCCC--CCSCCEETTCBHHHHHHHHHHHTCSEEEEECTTTCCEEEEEEHHHHHHHHHHH-------------
T ss_pred ccCCcHHHhCcC--CCeEEcCCCCcHHHHHHHHHHcCCCeEEEEECCCCEEEEEEEHHHHHHHHHhc-------------
Confidence 446899999998 89999999 9999999999999999999999 789999999999998643210
Q ss_pred ccchhhHHHHHHHHHhhcCCccccccccCceEEcCCCCHHHHHHHHHHcCCcEEEEEcCC----CcEEEEEEccc
Q 026495 158 DSTWKTFNEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD----GWNYHKRKCSK 228 (237)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~----~~~iGvIt~~d 228 (237)
......+++++|.++++++++++++.+++++|.++++ +||||++ |+++|+||+.|
T Consensus 446 --------------~~~~~~~V~~im~~~~~~v~~~~~l~~a~~~m~~~~~--~pVVd~~~~~~g~lvGIVT~~D 504 (527)
T 3pc3_A 446 --------------NRQQSDPAIKALNKRVIRLNESEILGKLARVLEVDPS--VLILGKNPAGKVELKALATKLD 504 (527)
T ss_dssp --------------CCCTTSBGGGGEETTCCEEETTSBHHHHHHHHTTCSE--EEEEEECSSSCEEEEEEEEHHH
T ss_pred --------------cCcCCCcHHHHhcCCCeEECCCCcHHHHHHHHhhCCE--EEEEeCCcccCCeEEEEEEHHH
Confidence 0123578999999999999999999999999977664 7999973 89999999876
No 57
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=99.60 E-value=2.5e-15 Score=135.64 Aligned_cols=111 Identities=23% Similarity=0.388 Sum_probs=99.5
Q ss_pred cccccccccCceeEEcCCCCHHHHHHHHHHCCCCeEEEEcC--CCcEEEEEehHhHhhhccccCCCCCCCCcccccccch
Q 026495 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDD--DWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTW 161 (237)
Q Consensus 84 ~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~pVvd~--~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~~~ 161 (237)
+.+++|.+ +++++++++++.+++++|.+++++.+||+|+ +++++|+||.+||+..
T Consensus 114 ~~~~~m~~--d~v~l~~~~tv~ea~~~m~~~~~s~~pVvd~g~~~~lvGiVt~rDl~~~--------------------- 170 (511)
T 3usb_A 114 RSESGVIS--DPFFLTPEHQVYDAEHLMGKYRISGVPVVNNLDERKLVGIITNRDMRFI--------------------- 170 (511)
T ss_dssp TSSSCSSS--SCCCBCTTSBHHHHHHHHHHHCCSEEEEESCTTTCBEEEEEEHHHHTTC---------------------
T ss_pred cccccccc--CCEEECCCCCHHHHHHHHHHcCCcEEEEEecCCCCEEEEEEEehHhhhh---------------------
Confidence 44566777 7899999999999999999999999999998 8999999999999741
Q ss_pred hhHHHHHHHHHhhcCCcccccccc-CceEEcCCCCHHHHHHHHHHcCCcEEEEEcCCCcEEEEEEccc
Q 026495 162 KTFNEVQKLLSKTNGKMVGDLMTP-APVVVRETTNLEDAARLLLETKYRRLPVVDADGWNYHKRKCSK 228 (237)
Q Consensus 162 ~~~~~~~~~~~~~~~~~v~~im~~-~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~iGvIt~~d 228 (237)
...+.++.++|++ +++++++++++.+++++|.+++.+.+||||++|+++|+||++|
T Consensus 171 -----------~~~~~~V~~vM~~~~~vtv~~~~~l~eal~~m~~~~i~~lpVVDe~g~l~GiIT~~D 227 (511)
T 3usb_A 171 -----------QDYSIKISDVMTKEQLITAPVGTTLSEAEKILQKYKIEKLPLVDNNGVLQGLITIKD 227 (511)
T ss_dssp -----------CCSSSBHHHHCCCCCCCCEETTCCHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHH
T ss_pred -----------ccCCCcHHHhcccCCCEEECCCCCHHHHHHHHHHcCCCEEEEEeCCCCEeeeccHHH
Confidence 1125789999997 8899999999999999999999999999999999999999875
No 58
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=99.57 E-value=1.1e-15 Score=137.42 Aligned_cols=165 Identities=18% Similarity=0.229 Sum_probs=111.7
Q ss_pred CcchhhhhccCCEEEEec---CccchhHHHhccCCCceEEecCCceeeeehhhhcccCCCCCcccccccccccCceeEEc
Q 026495 23 TSGRTSFALQLPCLLLSR---PGCRVFSVLATSSDRVSALRRSSAVFASGTLTANSAAPSSGVYTVGDFMTTKEELHVVK 99 (237)
Q Consensus 23 ~~~~~ai~~~v~~li~~~---~~~~v~~~~~~~~~~v~v~~~sp~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~ 99 (237)
......+..++|++.... +...+...+ +...++.++..+-........+.. -.+++++|.+ ++++++
T Consensus 34 t~lt~~i~l~iPivsa~MdtVTe~~ma~a~-a~~GGiGvI~~n~s~e~qa~~V~~-------Vk~~~~~m~~--d~v~v~ 103 (496)
T 4fxs_A 34 TRLTKNIALNIPMVSASMDTVTEARLAIAL-AQEGGIGFIHKNMSIEQQAAQVHQ-------VKIFEAGVVT--HPVTVR 103 (496)
T ss_dssp EEEETTEEESSSEEECCCTTTCSHHHHHHH-HHHTCEEEECSSSCHHHHHHHHHH-------HHHCCC--CB--CCCCBC
T ss_pred ceeccccccCCCceecCcchhhHHHHHHHH-HHcCCcceecCCCCHHHHHHHHHh-------cccccccccc--CceEEC
Confidence 334456778888776432 122222222 333445555422111111111111 1355678988 899999
Q ss_pred CCCCHHHHHHHHHHCCCCeEEEEcCCCcEEEEEehHhHhhhccccCCCCCCCCcccccccchhhHHHHHHHHHhhcCCcc
Q 026495 100 PTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMV 179 (237)
Q Consensus 100 ~~~~l~~~~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 179 (237)
+++++.+++++|.+++++.+||+|++++++|+||.+||+.. .....++
T Consensus 104 ~~~tv~ea~~~m~~~~~s~~PVvd~~~~lvGiVt~rDL~~~--------------------------------~~~~~~v 151 (496)
T 4fxs_A 104 PEQTIADVMELTHYHGFAGFPVVTENNELVGIITGRDVRFV--------------------------------TDLTKSV 151 (496)
T ss_dssp SSSBHHHHHHHHTSSCCCEEEEECSSSBEEEEEEHHHHTTC--------------------------------CCTTSBG
T ss_pred CCCCHHHHHHHHHHcCCcEEEEEccCCEEEEEEEHHHHhhc--------------------------------ccCCCcH
Confidence 99999999999999999999999988999999999999732 1225789
Q ss_pred ccccc-c-CceEEcCCCCHHHHHHHHHHcCCcEEEEEcCCCcEEEEEEcccC
Q 026495 180 GDLMT-P-APVVVRETTNLEDAARLLLETKYRRLPVVDADGWNYHKRKCSKG 229 (237)
Q Consensus 180 ~~im~-~-~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~iGvIt~~d~ 229 (237)
.++|+ + +++++++++++.+++++|.+++.+.+||||++|+++|+||++|=
T Consensus 152 ~diM~p~~~~vtv~~~~~l~ea~~~m~~~~i~~lpVVDe~G~l~GiIT~~DI 203 (496)
T 4fxs_A 152 AAVMTPKERLATVKEGATGAEVQEKMHKARVEKILVVNDEFQLKGMITAKDF 203 (496)
T ss_dssp GGTSEEGGGCCEEECC----CGGGTCC---CCCEEEECTTSBCCEEECCC--
T ss_pred HHHhcCCCCCEEECCCCCHHHHHHHHHHcCCCEEEEEcCCCCEEEeehHhHH
Confidence 99998 4 58899999999999999999999999999999999999999874
No 59
>3t4n_C Nuclear protein SNF4; CBS domain, nucleotide binding, cytosol, protein binding; HET: ADP; 2.30A {Saccharomyces cerevisiae} PDB: 3tdh_C* 3te5_C* 2qlv_C
Probab=99.56 E-value=2e-14 Score=122.08 Aligned_cols=116 Identities=19% Similarity=0.307 Sum_probs=95.4
Q ss_pred ccccccCceeEEcCCCCHHHHHHHHHHCCCCeEEEEcCCCc-----EEEEEehHhHhhhccccCCCCCCCCcccccccch
Q 026495 87 DFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWK-----LVGLVSDYDLLALDSISGSGRADNSMFPEVDSTW 161 (237)
Q Consensus 87 ~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~pVvd~~~~-----~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~~~ 161 (237)
++|.+ +++++++++++.++++.|.+++++++||+|+++. ++|++|.+|+++++.....
T Consensus 118 ~~~~~--~~v~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~~~~~l~Givt~~di~~~l~~~~~--------------- 180 (323)
T 3t4n_C 118 GVDQL--DTASIHPSRPLFEACLKMLESRSGRIPLIDQDEETHREIVVSVLTQYRILKFVALNCR--------------- 180 (323)
T ss_dssp TC------CCCBCTTSBHHHHHHHHHHHTCSEEEEEEECTTTCCEEEEEEEEHHHHHHHHHHHCG---------------
T ss_pred CCCCC--CceEeCCCCcHHHHHHHHHhCCeeEEEEEecCCCCCccceEEEecHHHHHHHHHhcCC---------------
Confidence 34456 7889999999999999999999999999998775 9999999999975321100
Q ss_pred hhHHHHHHHHHhhcCCccccc---cccCceEEcCCCCHHHHHHHHHHcCCcEEEEEcCCCcEEEEEEccc
Q 026495 162 KTFNEVQKLLSKTNGKMVGDL---MTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGWNYHKRKCSK 228 (237)
Q Consensus 162 ~~~~~~~~~~~~~~~~~v~~i---m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~iGvIt~~d 228 (237)
.......++.++ |.+++.++.+++++.++++.|.+++++.+||+|++|+++|+||.+|
T Consensus 181 ---------~~~~~~~~v~~~~~~m~~~~~~v~~~~~~~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~d 241 (323)
T 3t4n_C 181 ---------ETHFLKIPIGDLNIITQDNMKSCQMTTPVIDVIQMLTQGRVSSVPIIDENGYLINVYEAYD 241 (323)
T ss_dssp ---------GGGGCCSBGGGTTCSBCTTCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEETTH
T ss_pred ---------chhhhhCcHHHcCCCCCCCcEEECCCCcHHHHHHHHHHcCCCEEEEECCCCeEEEEEeHHH
Confidence 011234678999 8888999999999999999999999999999998899999999987
No 60
>2v8q_E 5'-AMP-activated protein kinase subunit gamma-1; phosphorylation, nucleotide-binding, serine/threonine-protei kinase, magnesium, CBS domain; HET: AMP; 2.10A {Rattus norvegicus} SCOP: d.37.1.1 d.37.1.1 PDB: 2v92_E* 2v9j_E* 2y8l_E* 2y8q_E* 2y94_E* 2ya3_E*
Probab=99.56 E-value=2.7e-14 Score=121.72 Aligned_cols=121 Identities=20% Similarity=0.200 Sum_probs=96.4
Q ss_pred cccccccCceeEEcCCCCHHHHHHHHHHCCCCeEEEEcC-CCcEEEEEehHhHhhhccccCCCCCCCCcccccccchhhH
Q 026495 86 GDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDD-DWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTF 164 (237)
Q Consensus 86 ~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~pVvd~-~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (237)
+++|.+ +++++++++++.++++.|.+++.+.+||+|+ +|+++|+||.+|++++.......... .
T Consensus 121 ~~im~~--~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~~Givt~~dl~~~~~~~~~~~~~-------~------ 185 (330)
T 2v8q_E 121 LQDSFK--PLVCISPNASLFDAVSSLIRNKIHRLPVIDPESGNTLYILTHKRILKFLKLFITEFPK-------P------ 185 (330)
T ss_dssp SSSSCC--CCCCBCTTSBHHHHHHHHHHHTCSCEEEECTTTCCEEEEECHHHHHHHHHHHSCSSSC-------C------
T ss_pred hhcccC--CceEeCCCCCHHHHHHHHHHCCCCeEEEEeCCCCcEEEEEcHHHHHHHHHHHhhccCc-------h------
Confidence 466787 7999999999999999999999999999998 79999999999999754211100000 0
Q ss_pred HHHHHHHHhhcCCccccc--cc-cCceEEcCCCCHHHHHHHHHHcCCcEEEEEcCCCcEEEEEEcccC
Q 026495 165 NEVQKLLSKTNGKMVGDL--MT-PAPVVVRETTNLEDAARLLLETKYRRLPVVDADGWNYHKRKCSKG 229 (237)
Q Consensus 165 ~~~~~~~~~~~~~~v~~i--m~-~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~iGvIt~~d~ 229 (237)
.....++.++ |. +++.++.+++++.++++.|.+++.+.+||+|++|+++|+||.+|-
T Consensus 186 --------~~~~~~v~~~~v~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~~~l~Giit~~dl 245 (330)
T 2v8q_E 186 --------EFMSKSLEELQIGTYANIAMVRTTTPVYVALGIFVQHRVSALPVVDEKGRVVDIYSKFDV 245 (330)
T ss_dssp --------GGGGSBHHHHTCSBCSSCCCEETTCBHHHHHHHHHHHCCSEEEEECTTSBEEEEEEGGGT
T ss_pred --------hhhcCCHHHhcccCcCCceEECCCCCHHHHHHHHHHcCCCeEEEECCCCcEEEEEEHHHH
Confidence 0012345554 54 678899999999999999999999999999988999999998873
No 61
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=99.55 E-value=2.4e-14 Score=128.88 Aligned_cols=111 Identities=26% Similarity=0.409 Sum_probs=100.9
Q ss_pred cccccccccCceeEEcCCCCHHHHHHHHHHCCCCeEEEEc--CCCcEEEEEehHhHhhhccccCCCCCCCCcccccccch
Q 026495 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVID--DDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTW 161 (237)
Q Consensus 84 ~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~pVvd--~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~~~ 161 (237)
.++++|.+ +++++++++++.++++.|.+++++.+||+| ++++++|+||.+||+...
T Consensus 91 ~~~~im~~--~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~~lvGivt~~Dl~~~~-------------------- 148 (491)
T 1zfj_A 91 RSENGVII--DPFFLTPEHKVSEAEELMQRYRISGVPIVETLANRKLVGIITNRDMRFIS-------------------- 148 (491)
T ss_dssp HHTTTTSS--SCCCBCSSSBHHHHHHHHHHTTCSEEEEESCTTTCBEEEEEEHHHHHHCS--------------------
T ss_pred hHHhcCcC--CCeEECCCCcHHHHHHHHHHcCCCEEEEEEeCCCCEEEEEEEHHHHhhhc--------------------
Confidence 45789998 899999999999999999999999999999 789999999999998531
Q ss_pred hhHHHHHHHHHhhcCCcccccccc-CceEEcCCCCHHHHHHHHHHcCCcEEEEEcCCCcEEEEEEccc
Q 026495 162 KTFNEVQKLLSKTNGKMVGDLMTP-APVVVRETTNLEDAARLLLETKYRRLPVVDADGWNYHKRKCSK 228 (237)
Q Consensus 162 ~~~~~~~~~~~~~~~~~v~~im~~-~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~iGvIt~~d 228 (237)
..+.++.++|++ ++.++++++++.++++.|.+++.+.+||||++|+++|+||+.|
T Consensus 149 ------------~~~~~v~~im~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVVd~~g~lvGivt~~D 204 (491)
T 1zfj_A 149 ------------DYNAPISEHMTSEHLVTAAVGTDLETAERILHEHRIEKLPLVDNSGRLSGLITIKD 204 (491)
T ss_dssp ------------CSSSBTTTSCCCSCCCCEETTCCHHHHHHHHHHTTCSEEEEECTTSBEEEEEEHHH
T ss_pred ------------cCCCcHHHHcCCCCCEEECCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEEHHH
Confidence 125789999987 8889999999999999999999999999999999999999876
No 62
>2qrd_G Protein C1556.08C; AMPK, ADP, ATP-binding, kinase, nucleotide-binding, serine/T protein kinase, transferase, CBS domain; HET: ADP ATP; 2.41A {Schizosaccharomyces pombe} PDB: 2qrc_G* 2qr1_G* 2qre_G* 2oox_G* 2ooy_G*
Probab=99.51 E-value=5.5e-14 Score=119.96 Aligned_cols=138 Identities=21% Similarity=0.237 Sum_probs=99.3
Q ss_pred CcccccccccccCceeEEcCCCCHHHHHHHHHHCCCCeEEEEcCC-CcEEEEEehHhHhhhccccCCCCCCCCccccccc
Q 026495 81 GVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDD-WKLVGLVSDYDLLALDSISGSGRADNSMFPEVDS 159 (237)
Q Consensus 81 ~~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~pVvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~ 159 (237)
...+++++|.++.+++++++++++.++++.|.+++++++||+|++ ++++|+|+.+|++.++............+....
T Consensus 20 ~~~~v~dim~~~~~vv~v~~~~tv~~a~~~~~~~~~~~~pV~d~~~~~~vGiv~~~Dl~~~~~~~~~~~~~~~~~~~~~- 98 (334)
T 2qrd_G 20 RSRTSYDVLPTSFRLIVFDVTLFVKTSLSLLTLNNIVSAPLWDSEANKFAGLLTMADFVNVIKYYYQSSSFPEAIAEID- 98 (334)
T ss_dssp HHSBGGGGSCSEEEEEEEETTSBHHHHHHHHHHHTCSCEEEEETTTTEEEEEECHHHHHHHHHHHHHHCSCGGGGGGGG-
T ss_pred hcCchhhhCCCCCCEEEEcCCCCHHHHHHHHHHcCCeEEEEEeCCCCeEEEEEEHHHHHHHHHHHhhccCCccHHHHHh-
Confidence 457999999886578899999999999999999999999999976 899999999999975321000000000000000
Q ss_pred chhhHHHHHHHHHhhcCCccccccccCc--eEEcCCCCHHHHHHHHHHcCCcEEEEEcCCC-c----EEEEEEccc
Q 026495 160 TWKTFNEVQKLLSKTNGKMVGDLMTPAP--VVVRETTNLEDAARLLLETKYRRLPVVDADG-W----NYHKRKCSK 228 (237)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~v~~im~~~~--~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~-~----~iGvIt~~d 228 (237)
......+.+. ++++|.+++ .++.+++++.++++.|.+++.+.+||+|++| + ++|+||.+|
T Consensus 99 -~~~~~~i~~~--------l~~im~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~~~~~~Givt~~d 165 (334)
T 2qrd_G 99 -KFRLLGLREV--------ERKIGAIPPETIYVHPMHSLMDACLAMSKSRARRIPLIDVDGETGSEMIVSVLTQYR 165 (334)
T ss_dssp -SCBHHHHHHH--------HHHHTCSCSSCCCBCTTSBHHHHHHHHHHSCCSEEEEEEEETTTTEEEEEEEEEHHH
T ss_pred -hhchhhHHHH--------HHhhccCCCceeeeCCCCcHHHHHHHHHHCCceEEEEEeCCCCcCccceEEEeeHHH
Confidence 0001111111 123566666 8899999999999999999999999998765 4 999999887
No 63
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=99.50 E-value=1.4e-15 Score=137.03 Aligned_cols=111 Identities=30% Similarity=0.448 Sum_probs=1.1
Q ss_pred cccccccccCceeEEcCCCCHHHHHHHHHHCCCCeEEEEcCCCcEEEEEehHhHhhhccccCCCCCCCCcccccccchhh
Q 026495 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKT 163 (237)
Q Consensus 84 ~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (237)
+++++|.+ +++++++++++.++++.|.+++++.+||+|++++++|+||.+|+++.
T Consensus 96 ~~~~iM~~--~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~lvGivt~~Dl~~~----------------------- 150 (494)
T 1vrd_A 96 KTENGIIY--DPITVTPDMTVKEAIDLMAEYKIGGLPVVDEEGRLVGLLTNRDVRFE----------------------- 150 (494)
T ss_dssp TC------------------------------------------------------------------------------
T ss_pred hHhhcCcc--CCeEECCCCCHHHHHHHHHHcCceEEEEEcCCCEEEEEEEHHHHHhh-----------------------
Confidence 46788998 89999999999999999999999999999988999999999999842
Q ss_pred HHHHHHHHHhhcCCcccccccc--CceEEcCCCCHHHHHHHHHHcCCcEEEEEcCCCcEEEEEEccc
Q 026495 164 FNEVQKLLSKTNGKMVGDLMTP--APVVVRETTNLEDAARLLLETKYRRLPVVDADGWNYHKRKCSK 228 (237)
Q Consensus 164 ~~~~~~~~~~~~~~~v~~im~~--~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~iGvIt~~d 228 (237)
.....++.++|++ ++.++++++++.+++++|.+++++.+||||++|+++|+||+.|
T Consensus 151 ---------~~~~~~v~~im~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIt~~D 208 (494)
T 1vrd_A 151 ---------KNLSKKIKDLMTPREKLIVAPPDISLEKAKEILHQHRIEKLPLVSKDNKLVGLITIKD 208 (494)
T ss_dssp -------------------------------------------------------------------
T ss_pred ---------cCCCCcHHHHhCCCCCCeEECCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHH
Confidence 0124689999987 8999999999999999999999999999999999999999876
No 64
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=99.49 E-value=1.9e-15 Score=135.83 Aligned_cols=168 Identities=21% Similarity=0.277 Sum_probs=25.3
Q ss_pred CCCCCcchhhhhccCCEEEEec---CccchhHHHhccCCCceEEecCCceeeeehhhhcccCCCCCcccccccccccCce
Q 026495 19 PAGRTSGRTSFALQLPCLLLSR---PGCRVFSVLATSSDRVSALRRSSAVFASGTLTANSAAPSSGVYTVGDFMTTKEEL 95 (237)
Q Consensus 19 ~~~~~~~~~ai~~~v~~li~~~---~~~~v~~~~~~~~~~v~v~~~sp~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~ 95 (237)
..........+...+|.+.... +...+...+ +...++.++..+-........+. ...+++++|.+ ++
T Consensus 29 ~~~~t~lt~~i~l~iPivsa~M~tVTe~~lA~al-a~~GGiGvI~~~~~~e~~a~~v~-------~vk~~~~~m~~--~~ 98 (490)
T 4avf_A 29 VSLKTRLTRGIELNIPLVSAAMDTVTEARLAIAM-AQEGGIGIIHKNMGIEQQAAEVR-------KVKKHETAIVR--DP 98 (490)
T ss_dssp SCCCEEEETTEEESSSEEECSCTTTCSHHHHHHH-HHHTSEEEECCSSCHHHHHHHHH-------HHHHCCC--------
T ss_pred eeeecccccCcccCCCccccchhhhCHHHHHHHH-HHcCCCccccCCCCHHHHHHHhh-------hhcccccCccc--Cc
Confidence 3344445567888899776532 122222233 22234444442111111111111 12356788988 89
Q ss_pred eEEcCCCCHHHHHHHHHHCCCCeEEEEcCCCcEEEEEehHhHhhhccccCCCCCCCCcccccccchhhHHHHHHHHHhhc
Q 026495 96 HVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTN 175 (237)
Q Consensus 96 ~~v~~~~~l~~~~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (237)
+++++++++.+++++|.+++++.+||+| +++++|+||.+||... ...
T Consensus 99 v~v~~~~tv~ea~~~m~~~~~s~~pVvd-~g~lvGIVt~rDl~~~--------------------------------~~~ 145 (490)
T 4avf_A 99 VTVTPSTKIIELLQMAREYGFSGFPVVE-QGELVGIVTGRDLRVK--------------------------------PNA 145 (490)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred eEeCCCCcHHHHHHHHHHhCCCEEEEEE-CCEEEEEEEhHHhhhc--------------------------------ccc
Confidence 9999999999999999999999999999 7999999999999632 122
Q ss_pred CCccccccc-c-CceEEcCCCCHHHHHHHHHHcCCcEEEEEcCCCcEEEEEEcccC
Q 026495 176 GKMVGDLMT-P-APVVVRETTNLEDAARLLLETKYRRLPVVDADGWNYHKRKCSKG 229 (237)
Q Consensus 176 ~~~v~~im~-~-~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~iGvIt~~d~ 229 (237)
..++.++|+ + ++.++++++++.+++++|.+++.+.+||||++|+++|+||++|=
T Consensus 146 ~~~V~~vMtp~~~~vtv~~~~~l~ea~~~m~~~~i~~lpVVDe~g~lvGiIT~~Di 201 (490)
T 4avf_A 146 GDTVAAIMTPKDKLVTAREGTPLEEMKAKLYENRIEKMLVVDENFYLRGLVTFRDI 201 (490)
T ss_dssp --------------------------------------------------------
T ss_pred CCcHHHHhccCCCCEEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEehHHh
Confidence 468999998 4 68999999999999999999999999999999999999999873
No 65
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=99.48 E-value=2.8e-15 Score=135.26 Aligned_cols=112 Identities=26% Similarity=0.261 Sum_probs=1.7
Q ss_pred cccc-ccccCceeEEcCCCCHHHHHHHHHHCCCCeEEEEcCC---CcEEEEEehHhHhhhccccCCCCCCCCcccccccc
Q 026495 85 VGDF-MTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDD---WKLVGLVSDYDLLALDSISGSGRADNSMFPEVDST 160 (237)
Q Consensus 85 v~~i-m~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~pVvd~~---~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~~ 160 (237)
..++ |.+ +++++++++++.+++++|.+++++.+||+|++ ++++|+||.+|+++.
T Consensus 98 ~~e~gM~~--~~~~v~~~~tv~eal~~m~~~~~s~~pVvd~~~~~g~lvGiVt~~Dl~~~-------------------- 155 (503)
T 1me8_A 98 NFKAGFVV--SDSNVKPDQTFADVLAISQRTTHNTVAVTDDGTPHGVLLGLVTQRDYPID-------------------- 155 (503)
T ss_dssp TTTC----------------------------------------------------------------------------
T ss_pred hcccCccc--CCeEECCCCcHHHHHHHHHHcCceEEEEEECCCcCCeEEEEEEHHHHHhh--------------------
Confidence 3345 888 89999999999999999999999999999987 899999999999842
Q ss_pred hhhHHHHHHHHHhhcCCccccccccC--ceEEcCCCCHHHHHHHHHHcCCcEEEEEcCCCcEEEEEEcccC
Q 026495 161 WKTFNEVQKLLSKTNGKMVGDLMTPA--PVVVRETTNLEDAARLLLETKYRRLPVVDADGWNYHKRKCSKG 229 (237)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~v~~im~~~--~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~iGvIt~~d~ 229 (237)
......++.++|+++ ++++++++++.+++++|.+++++.+||+|++|+++|+||.+|=
T Consensus 156 -----------~~~~~~~V~diM~~~~~~~tv~~~~sl~ea~~~m~~~~i~~lpVVDe~g~lvGiIT~~Di 215 (503)
T 1me8_A 156 -----------LTQTETKVSDMMTPFSKLVTAHQDTKLSEANKIIWEKKLNALPIIDDDQHLRYIVFRKDY 215 (503)
T ss_dssp -----------------------------------------------------------------------
T ss_pred -----------hccccCcHHHHhCCCCCCEEEcCCCcHHHHHHHHHHcCCCEEEEEcCCCeEEEEEEecHH
Confidence 011246899999887 8999999999999999999999999999999999999999873
No 66
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=99.45 E-value=6.7e-15 Score=130.75 Aligned_cols=159 Identities=23% Similarity=0.277 Sum_probs=20.7
Q ss_pred hhhhccCCEEEEecCccchh-HHH---hccCCCceEEecCCceeeeehhhhcccCCCCCcccccccccccCceeEEcCCC
Q 026495 27 TSFALQLPCLLLSRPGCRVF-SVL---ATSSDRVSALRRSSAVFASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTT 102 (237)
Q Consensus 27 ~ai~~~v~~li~~~~~~~v~-~~~---~~~~~~v~v~~~sp~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~ 102 (237)
..+..++|++... -..+. .+| .+..-++.++..+--.......... -.+-+..|.. +++++.++.
T Consensus 87 ~~i~L~iPlvSA~--MDTVTe~~MAIamAr~GGiGvIH~n~sie~Qa~~V~~-------VKr~e~g~i~--dPvtl~P~~ 155 (556)
T 4af0_A 87 KNIVLNTPFLSSP--MDTVTEDRMAIALALHGGLGIIHHNCSAEEQAAMVRR-------VKKYENGFIT--DPLCLGPDA 155 (556)
T ss_dssp TTEEESSCEEECC--CTTTCSHHHHHHHHHTTCEEEECCSSCHHHHHHHHHH-------HHHCCC---------------
T ss_pred CCcEeCCCEEecC--cccccCHHHHHHHHHCCCeEEEcCCCCHHHHHHHHHH-------HHhcccCccC--CCeEcCCCC
Confidence 5677778877543 22222 222 4555667776633111000111110 0011234555 689999999
Q ss_pred CHHHHHHHHHHCCCCeEEEEcC---CCcEEEEEehHhHhhhccccCCCCCCCCcccccccchhhHHHHHHHHHhhcCCcc
Q 026495 103 TVDEALEILVEKRITGFPVIDD---DWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTNGKMV 179 (237)
Q Consensus 103 ~l~~~~~~~~~~~~~~~pVvd~---~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 179 (237)
|+.|++++|.+++++.+||+|+ +++++||||.+|+.. ...+.+|
T Consensus 156 Tv~da~~l~~~~~isgvpVvd~g~~~~kLvGIvT~RD~rf---------------------------------~d~~~~V 202 (556)
T 4af0_A 156 TVGDVLEIKAKFGFCGVPITETGEPDSKLLGIVTGRDVQF---------------------------------QDAETPI 202 (556)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CHHHHHHHHHHhCCCccccccccCcCCEEEEEEecccccc---------------------------------cccceEh
Confidence 9999999999999999999986 579999999999863 1225789
Q ss_pred ccccccCceEEcCCCCHHHHHHHHHHcCCcEEEEEcCCCcEEEEEEcccC
Q 026495 180 GDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGWNYHKRKCSKG 229 (237)
Q Consensus 180 ~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~iGvIt~~d~ 229 (237)
+++|++++.++++..++++|.++|.++++..+||||++++++|+||++|=
T Consensus 203 ~evMT~~lvt~~~~~~leeA~~iL~~~kieklpVVd~~g~LvGlIT~kDi 252 (556)
T 4af0_A 203 KSVMTTEVVTGSSPITLEKANSLLRETKKGKLPIVDSNGHLVSLVARSDL 252 (556)
T ss_dssp --------------------------------------------------
T ss_pred hhhcccceEEecCCCCHHHHHHHHHHccccceeEEccCCcEEEEEEechh
Confidence 99999999999999999999999999999999999999999999999884
No 67
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=99.42 E-value=7.3e-15 Score=132.99 Aligned_cols=113 Identities=26% Similarity=0.380 Sum_probs=66.4
Q ss_pred cccccccccCceeEEcCCCCHHHHHHHHHHCCCCeEEEEcC---CCcEEEEEehHhHhhhccccCCCCCCCCcccccccc
Q 026495 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDD---DWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDST 160 (237)
Q Consensus 84 ~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~pVvd~---~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~~ 160 (237)
+++++|.+ +++++.+++++.+++++|.+++++.+||+|+ +++++|+||.+|+.+...
T Consensus 109 ~~~~im~~--~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~~~lvGiVt~~Dl~~~~~------------------ 168 (514)
T 1jcn_A 109 NFEQGFIT--DPVVLSPSHTVGDVLEAKMRHGFSGIPITETGTMGSKLVGIVTSRDIDFLAE------------------ 168 (514)
T ss_dssp TCCTTSCS--SCCCCCC-----------------CEESCC--------CCEECTTTTC----------------------
T ss_pred hhhhcccc--CCEEECCCCCHHHHHHHHHhcCCCEEEEEeCCCcCCEEEEEEEHHHHHhhhh------------------
Confidence 56788987 7889999999999999999999999999997 589999999999975210
Q ss_pred hhhHHHHHHHHHhhcCCcccccccc--CceEEcCCCCHHHHHHHHHHcCCcEEEEEcCCCcEEEEEEccc
Q 026495 161 WKTFNEVQKLLSKTNGKMVGDLMTP--APVVVRETTNLEDAARLLLETKYRRLPVVDADGWNYHKRKCSK 228 (237)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~v~~im~~--~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~iGvIt~~d 228 (237)
.....++.++|++ +++++++++++.+++++|.+++.+.+||||++|+++|+||++|
T Consensus 169 ------------~~~~~~v~~vm~~~~~~~tv~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIt~~D 226 (514)
T 1jcn_A 169 ------------KDHTTLLSEVMTPRIELVVAPAGVTLKEANEILQRSKKGKLPIVNDCDELVAIIARTD 226 (514)
T ss_dssp ------------------------CCBCCCCEETTCCSTTTTTHHHHHTCSCCCEESSSSCCC----CCC
T ss_pred ------------ccCCCCHHHHhCCCCCCeEECCCCCHHHHHHHHHHcCCCcccEECCCCeEEEEEEHHH
Confidence 0124679999988 8999999999999999999999999999999999999999876
No 68
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=99.33 E-value=1.1e-13 Score=124.35 Aligned_cols=107 Identities=33% Similarity=0.547 Sum_probs=0.9
Q ss_pred ccccccccCceeEEcCCCCHHHHHHHHHHCCCCeEEEEcCCCcEEEEEehHhHhhhccccCCCCCCCCcccccccchhhH
Q 026495 85 VGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTF 164 (237)
Q Consensus 85 v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (237)
..+.|.. +++++++++++.++++.|.+++++.+||+|+ ++++|+|+.+||+.
T Consensus 95 ~~~~m~~--~~~~v~~~~tv~ea~~~~~~~~~~~~pVvd~-~~lvGivt~~Dl~~------------------------- 146 (486)
T 2cu0_A 95 AERLIVE--DVITIAPDETVDFALFLMEKHGIDGLPVVED-EKVVGIITKKDIAA------------------------- 146 (486)
T ss_dssp CC------------------------------------------------------------------------------
T ss_pred hhhcccc--CceEECCCCCHHHHHHHHHHcCCcEEEEEEC-CEEEEEEEHHHhcc-------------------------
Confidence 3557887 8999999999999999999999999999997 99999999999973
Q ss_pred HHHHHHHHhhcCCccccccccCceEEcCCCCHHHHHHHHHHcCCcEEEEEcCCCcEEEEEEccc
Q 026495 165 NEVQKLLSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGWNYHKRKCSK 228 (237)
Q Consensus 165 ~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~iGvIt~~d 228 (237)
....++.++|.+++.++++++++.++++.|.+++.+.+||||++|+++|+||++|
T Consensus 147 ---------~~~~~v~~im~~~~~~v~~~~~l~eal~~m~~~~~~~lpVVde~g~lvGiiT~~D 201 (486)
T 2cu0_A 147 ---------REGKLVKELMTKEVITVPESIEVEEALKIMIENRIDRLPVVDERGKLVGLITMSD 201 (486)
T ss_dssp ----------------------------------------------------------------
T ss_pred ---------CCCCCHHHHccCCCeEECCcCcHHHHHHHHHHcCCCEEEEEecCCeEEEEEEHHH
Confidence 0146789999888899999999999999999999999999998899999999876
No 69
>1vr9_A CBS domain protein/ACT domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 1.70A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.32 E-value=1.3e-11 Score=99.13 Aligned_cols=160 Identities=13% Similarity=0.070 Sum_probs=85.1
Q ss_pred CCCCCcchhhhhccCCEEEEecCccchhHHH-hccCCCceEEecCC-ce-eeeehhhhcccCCCCCcccccccccccCce
Q 026495 19 PAGRTSGRTSFALQLPCLLLSRPGCRVFSVL-ATSSDRVSALRRSS-AV-FASGTLTANSAAPSSGVYTVGDFMTTKEEL 95 (237)
Q Consensus 19 ~~~~~~~~~ai~~~v~~li~~~~~~~v~~~~-~~~~~~v~v~~~sp-~~-~~~~~~~~~~~~~~~~~~~v~~im~~~~~~ 95 (237)
.+|.......+...+.++-...+..++.+.+ ......+++..+.. .. ......+.. .....+++++|.+ ++
T Consensus 9 ~~~~~~~~~~~~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~l~Givt~~dl~~----~~~~~~v~~im~~--~~ 82 (213)
T 1vr9_A 9 HHHHMKVKKWVTQDFPMVEESATVRECLHRMRQYQTNECIVKDREGHFRGVVNKEDLLD----LDLDSSVFNKVSL--PD 82 (213)
T ss_dssp ----CBGGGGCBSCSCEEETTCBHHHHHHHHHHTTSSEEEEECTTSBEEEEEEGGGGTT----SCTTSBSGGGCBC--TT
T ss_pred cccccCHHHhhcCCCeEECCCCcHHHHHHHHHHCCCCEEEEEcCCCEEEEEEEHHHHHh----hcCCCcHHHHccC--CC
Confidence 3566667677777887776555455556666 55666788886332 22 333322222 1235689999998 79
Q ss_pred eEEcCCCCHHHHHHHHHHCCCCeEEEEcCCCcEEEEEehHhHhhhccccCCCCCCCCcccccccchhhHHHHHHHHHhhc
Q 026495 96 HVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKTN 175 (237)
Q Consensus 96 ~~v~~~~~l~~~~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (237)
+++++++++.++++.|.+++++.+||+|++|+++|+||.+|+++.....
T Consensus 83 ~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiit~~Dil~~~~~~------------------------------- 131 (213)
T 1vr9_A 83 FFVHEEDNITHALLLFLEHQEPYLPVVDEEMRLKGAVSLHDFLEALIEA------------------------------- 131 (213)
T ss_dssp CCEETTSBHHHHHHHHHHCCCSEEEEECTTCBEEEEEEHHHHHHHHHHS-------------------------------
T ss_pred EEECCCCcHHHHHHHHHHhCCCEEEEEcCCCEEEEEEEHHHHHHHHHHH-------------------------------
Confidence 9999999999999999999999999999889999999999999743210
Q ss_pred CCccccccccC-ceEEcCCCCHHHHHHHHHHcCCcEEEEEcC
Q 026495 176 GKMVGDLMTPA-PVVVRETTNLEDAARLLLETKYRRLPVVDA 216 (237)
Q Consensus 176 ~~~v~~im~~~-~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~ 216 (237)
....+.+.+- +.+.....++.++.+.|.+++.+.++|++.
T Consensus 132 -~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~~~~~~l~V~~~ 172 (213)
T 1vr9_A 132 -LAMDVPGIRFSVLLEDKPGELRKVVDALALSNINILSVITT 172 (213)
T ss_dssp -CC---------------------------------------
T ss_pred -hcCCCCcEEEEEEeCCCCccHHHHHHHHHHCCCcEEEEEEE
Confidence 1112222211 111123345889999999999988888754
No 70
>3ghd_A A cystathionine beta-synthase domain protein FUSE ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus}
Probab=99.21 E-value=4e-11 Score=79.18 Aligned_cols=69 Identities=28% Similarity=0.426 Sum_probs=55.7
Q ss_pred eeEEcCCCCHHHHHHHHHHCCCCeEEEEcCCCcEEEEEehHhHhhhccccCCCCCCCCcccccccchhhHHHHHHHHHhh
Q 026495 95 LHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKLLSKT 174 (237)
Q Consensus 95 ~~~v~~~~~l~~~~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (237)
++++.+++++.+|+++|.+++++++||+| +|+++|++|.+||++.....+. ..
T Consensus 2 ~vtv~p~~tv~ea~~~M~~~~i~~~~V~d-~~~lvGIvT~~Di~~~~~~~~~--------------------------~~ 54 (70)
T 3ghd_A 2 AIVVQPKDTVDRVAKILSRNKAGSAVVME-GDEILGVVTERDILDKVVAKGK--------------------------NP 54 (70)
T ss_dssp EEEECTTCBHHHHHHHHHHTTCSEEEEEE-TTEEEEEEEHHHHHHHTTTTTC--------------------------CG
T ss_pred CEEECCCCcHHHHHHHHHHcCCCEEEEEE-CCEEEEEEEHHHHHHHHHhcCC--------------------------Cc
Confidence 67899999999999999999999999998 5899999999999864322211 11
Q ss_pred cCCccccccccCceEE
Q 026495 175 NGKMVGDLMTPAPVVV 190 (237)
Q Consensus 175 ~~~~v~~im~~~~~~v 190 (237)
.+.+++++|++++.++
T Consensus 55 ~~~~V~~iMt~~~iTV 70 (70)
T 3ghd_A 55 KEVKVEEIMTKNPVKI 70 (70)
T ss_dssp GGCBGGGTCEECTTCC
T ss_pred ccCCHHHhcCCCCeEC
Confidence 2468999999887653
No 71
>3l2b_A Probable manganase-dependent inorganic pyrophosphatase; family II, CBS domain, bateman domain, AP4A, diadenosine polyphosphate, DRTGG; HET: B4P; 2.27A {Clostridium perfringens} PDB: 3l31_A*
Probab=99.16 E-value=2.6e-11 Score=99.13 Aligned_cols=106 Identities=20% Similarity=0.360 Sum_probs=82.6
Q ss_pred cchhhhhccCCEEEEecCccchhHHH--hccCCCceEEecCCce-eeeehhhhcccCCCCCccccccccc-ccCceeEEc
Q 026495 24 SGRTSFALQLPCLLLSRPGCRVFSVL--ATSSDRVSALRRSSAV-FASGTLTANSAAPSSGVYTVGDFMT-TKEELHVVK 99 (237)
Q Consensus 24 ~~~~ai~~~v~~li~~~~~~~v~~~~--~~~~~~v~v~~~sp~~-~~~~~~~~~~~~~~~~~~~v~~im~-~~~~~~~v~ 99 (237)
..+.+++.+++++++++ +..+.+.+ .....+++++. ++++ +...+.+. ...+++++|+ + ++.+++
T Consensus 132 ~~~~~i~~~~~~liit~-~~~~~~~v~~~a~~~~~~~i~-t~~d~~~~~~~~~-------~~~~v~~im~~~--~~~~~~ 200 (245)
T 3l2b_A 132 IQAELIELKVSLLIVTG-GHTPSKEIIELAKKNNITVIT-TPHDSFTASRLIV-------QSLPVDYVMTKD--NLVAVS 200 (245)
T ss_dssp HHHHHHHTTCSEEEECT-TCCCCHHHHHHHHHHTCEEEE-CSSCHHHHHHHGG-------GGSBHHHHSBCT--TCCCEE
T ss_pred HHHHHHHcCCCEEEECC-CCCCCHHHHHHHHHcCCeEEE-eCCChHHHHHHHh-------cCCceeeEecCC--ccEEEC
Confidence 34677899999999997 66665555 45566788888 7777 54444333 3457999999 5 799999
Q ss_pred CCCCHHHHHHHHHHCCCCeEEEEcCCCcEEEEEehHhHhhh
Q 026495 100 PTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLAL 140 (237)
Q Consensus 100 ~~~~l~~~~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~ 140 (237)
+++++.++++.|.+++++++||+|++|+++|+||.+|+++.
T Consensus 201 ~~~~~~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dll~~ 241 (245)
T 3l2b_A 201 TDDLVEDVKVTMSETRYSNYPVIDENNKVVGSIARFHLIST 241 (245)
T ss_dssp TTSBHHHHHHHHHHHCCSEEEEECTTCBEEEEEECC-----
T ss_pred CCCcHHHHHHHHHhcCCceEEEEcCCCeEEEEEEHHHhhch
Confidence 99999999999999999999999988999999999999864
No 72
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=99.03 E-value=1.7e-09 Score=79.14 Aligned_cols=105 Identities=18% Similarity=0.182 Sum_probs=75.2
Q ss_pred CCEEEEecCccchhHHH-hccCCCceEEecC--Cce-eeeehhhhcccCCCCCcccccccccccCceeEEcCCCCHHHHH
Q 026495 33 LPCLLLSRPGCRVFSVL-ATSSDRVSALRRS--SAV-FASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEAL 108 (237)
Q Consensus 33 v~~li~~~~~~~v~~~~-~~~~~~v~v~~~s--p~~-~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~ 108 (237)
+.++-...+..++.+.+ ......+|+..+. ... ......+...........+++++|.+ +.++++++++.+++
T Consensus 15 ~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~vGivt~~dl~~~~~~~~~~~~v~~~m~~---~~~v~~~~~l~~a~ 91 (127)
T 3nqr_A 15 MITLKRNQTLDECLDVIIESAHSRFPVISEDKDHIEGILMAKDLLPFMRSDAEAFSMDKVLRT---AVVVPESKRVDRML 91 (127)
T ss_dssp CCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGGSTTCCCCCHHHHCBC---CCEEETTCBHHHHH
T ss_pred eEEEcCCCCHHHHHHHHHhCCCCEEEEEcCCCCcEEEEEEHHHHHHHHhccCCCCCHHHHcCC---CeEECCCCcHHHHH
Confidence 44444334344444555 5566678888753 222 33333333322234457789999965 67899999999999
Q ss_pred HHHHHCCCCeEEEEcCCCcEEEEEehHhHhhh
Q 026495 109 EILVEKRITGFPVIDDDWKLVGLVSDYDLLAL 140 (237)
Q Consensus 109 ~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~ 140 (237)
+.|.+++.+.+||+|++|+++|+||.+|+++.
T Consensus 92 ~~m~~~~~~~lpVvd~~g~~~Giit~~dll~~ 123 (127)
T 3nqr_A 92 KEFRSQRYHMAIVIDEFGGVSGLVTIEDILEL 123 (127)
T ss_dssp HHHHHTTCCEEEEECTTSCEEEEEEHHHHHHH
T ss_pred HHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHH
Confidence 99999999999999988999999999999974
No 73
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=99.00 E-value=1.2e-09 Score=80.03 Aligned_cols=112 Identities=13% Similarity=0.144 Sum_probs=80.7
Q ss_pred hhhhccCCEEEEecCccchhHHH-hccCCCceEEecCCce-eeeehhhhcccCCCC-CcccccccccccCceeEEcCCCC
Q 026495 27 TSFALQLPCLLLSRPGCRVFSVL-ATSSDRVSALRRSSAV-FASGTLTANSAAPSS-GVYTVGDFMTTKEELHVVKPTTT 103 (237)
Q Consensus 27 ~ai~~~v~~li~~~~~~~v~~~~-~~~~~~v~v~~~sp~~-~~~~~~~~~~~~~~~-~~~~v~~im~~~~~~~~v~~~~~ 103 (237)
..+...++.+-...+..++.+.+ ......+++..+.... ......+........ ...+++++|.+ ++.+++++++
T Consensus 9 ~~m~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~Givt~~dl~~~~~~~~~~~~~v~~~m~~--~~~~v~~~~~ 86 (128)
T 3gby_A 9 YLAETDYPVFTLGGSTADAARRLAASGCACAPVLDGERYLGMVHLSRLLEGRKGWPTVKEKLGEELLE--TVRSYRPGEQ 86 (128)
T ss_dssp GGCBCCSCCEETTSBHHHHHHHHHHHTCSEEEEEETTEEEEEEEHHHHHTTCSSSCCTTCBCCGGGCB--CCCCBCTTSB
T ss_pred HhhcCCcceECCCCCHHHHHHHHHHCCCcEEEEEECCEEEEEEEHHHHHHHHhhCCcccCcHHHHccC--CCcEECCCCC
Confidence 45566666665555555556666 5566778888752222 333333332222222 22679999998 7899999999
Q ss_pred HHHHHHHHHHCCCCeEEEEcCCCcEEEEEehHhHhhh
Q 026495 104 VDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLAL 140 (237)
Q Consensus 104 l~~~~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~ 140 (237)
+.++++.|.+++.+.+||+|++|+++|+||..|+++.
T Consensus 87 l~~~~~~~~~~~~~~lpVvd~~g~~~Giit~~dll~~ 123 (128)
T 3gby_A 87 LFDNLISVAAAKCSVVPLADEDGRYEGVVSRKRILGF 123 (128)
T ss_dssp GGGSHHHHHHCSSSEEEEECTTCBEEEEEEHHHHHHH
T ss_pred HHHHHHHHHhCCCcEEEEECCCCCEEEEEEHHHHHHH
Confidence 9999999999999999999988999999999999975
No 74
>3fio_A A cystathionine beta-synthase domain protein fused to A Zn-ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus} PDB: 3ghd_A
Probab=99.00 E-value=1.1e-09 Score=71.58 Aligned_cols=46 Identities=28% Similarity=0.427 Sum_probs=42.9
Q ss_pred eeEEcCCCCHHHHHHHHHHCCCCeEEEEcCCCcEEEEEehHhHhhhc
Q 026495 95 LHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALD 141 (237)
Q Consensus 95 ~~~v~~~~~l~~~~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~ 141 (237)
+.++++++++.++++.|.+++++.+||+|+ |+++|+||.+|+++.+
T Consensus 2 ~~~v~~~~~~~~a~~~m~~~~~~~~pV~d~-~~l~Givt~~dl~~~~ 47 (70)
T 3fio_A 2 AIVVQPKDTVDRVAKILSRNKAGSAVVMEG-DEILGVVTERDILDKV 47 (70)
T ss_dssp EEEECTTCBHHHHHHHHHHTTCSEEEEEET-TEEEEEEEHHHHHHHT
T ss_pred CeEECCCCcHHHHHHHHHHcCCCEEEEEEC-CEEEEEEEHHHHHHHH
Confidence 578999999999999999999999999997 9999999999999754
No 75
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=98.98 E-value=3.1e-09 Score=78.79 Aligned_cols=105 Identities=12% Similarity=0.094 Sum_probs=74.5
Q ss_pred CCEEEEecCccchhHHH-hccCCCceEEecC--Cce-eeeehhhhcccC-CCCCcccccccccccCceeEEcCCCCHHHH
Q 026495 33 LPCLLLSRPGCRVFSVL-ATSSDRVSALRRS--SAV-FASGTLTANSAA-PSSGVYTVGDFMTTKEELHVVKPTTTVDEA 107 (237)
Q Consensus 33 v~~li~~~~~~~v~~~~-~~~~~~v~v~~~s--p~~-~~~~~~~~~~~~-~~~~~~~v~~im~~~~~~~~v~~~~~l~~~ 107 (237)
+.++-...+...+.+.+ ......+|+..+. ... ....+.+..... ......+++++|++ +.++++++++.++
T Consensus 15 ~~~v~~~~~v~~a~~~m~~~~~~~~pVvd~~~~~~vGivt~~dl~~~~~~~~~~~~~v~~~m~~---~~~v~~~~~l~~~ 91 (136)
T 3lfr_A 15 MISIKATQTPREFLPAVIDAAHSRYPVIGESHDDVLGVLLAKDLLPLILKADGDSDDVKKLLRP---ATFVPESKRLNVL 91 (136)
T ss_dssp CCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGGGSSSGGGCCGGGTCBC---CCEEETTCBHHHH
T ss_pred EEEEcCCCCHHHHHHHHHhCCCCEEEEEcCCCCcEEEEEEHHHHHHHHHhccCCCcCHHHHcCC---CeEECCCCcHHHH
Confidence 34443333344444555 5566677887643 222 333333332211 23456789999976 7899999999999
Q ss_pred HHHHHHCCCCeEEEEcCCCcEEEEEehHhHhhh
Q 026495 108 LEILVEKRITGFPVIDDDWKLVGLVSDYDLLAL 140 (237)
Q Consensus 108 ~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~ 140 (237)
+..|.+++.+.+||+|++|+++|+||.+|+++.
T Consensus 92 ~~~m~~~~~~~~~Vvd~~g~lvGiit~~Dil~~ 124 (136)
T 3lfr_A 92 LREFRANHNHMAIVIDEYGGVAGLVTIEDVLEQ 124 (136)
T ss_dssp HHHHHHHTCCEEEEECTTSCEEEEEEHHHHHTT
T ss_pred HHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHH
Confidence 999999999999999988999999999999975
No 76
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=98.97 E-value=3.7e-09 Score=77.58 Aligned_cols=104 Identities=14% Similarity=0.157 Sum_probs=72.5
Q ss_pred cCCEEEEecCccchhHHH-hccCCCceEEecC--Cce-eeeehhhhcccCCCCCcccccccccccCceeEEcCCCCHHHH
Q 026495 32 QLPCLLLSRPGCRVFSVL-ATSSDRVSALRRS--SAV-FASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEA 107 (237)
Q Consensus 32 ~v~~li~~~~~~~v~~~~-~~~~~~v~v~~~s--p~~-~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~ 107 (237)
.+.++-...+..++.+.+ ......+|+..+. ... ....+.+..... ....+++++|.+ +.++++++++.++
T Consensus 16 ~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~~Givt~~dl~~~~~--~~~~~v~~~m~~---~~~v~~~~~l~~~ 90 (129)
T 3jtf_A 16 RMDLLDISQPLPQLLATIIETAHSRFPVYEDDRDNIIGILLAKDLLRYML--EPALDIRSLVRP---AVFIPEVKRLNVL 90 (129)
T ss_dssp GCCCEETTSCHHHHHHHHHHSCCSEEEEESSSTTCEEEEEEGGGGGGGGT--CTTSCGGGGCBC---CCEEETTCBHHHH
T ss_pred HeEEECCCCCHHHHHHHHHHcCCCEEEEEcCCCCcEEEEEEHHHHHhHhc--cCCcCHHHHhCC---CeEeCCCCcHHHH
Confidence 334443333344445555 5556677887642 222 333333332211 246689999975 7899999999999
Q ss_pred HHHHHHCCCCeEEEEcCCCcEEEEEehHhHhhh
Q 026495 108 LEILVEKRITGFPVIDDDWKLVGLVSDYDLLAL 140 (237)
Q Consensus 108 ~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~ 140 (237)
++.|.+++.+.+||+|++|+++|+||.+|+++.
T Consensus 91 ~~~m~~~~~~~~pVvd~~g~~~Giit~~Dil~~ 123 (129)
T 3jtf_A 91 LREFRASRNHLAIVIDEHGGISGLVTMEDVLEQ 123 (129)
T ss_dssp HHHHHTSSCCEEEEECC-CCEEEEEEHHHHHHH
T ss_pred HHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHH
Confidence 999999999999999988999999999999974
No 77
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=98.95 E-value=4.2e-09 Score=81.08 Aligned_cols=57 Identities=28% Similarity=0.367 Sum_probs=53.1
Q ss_pred cccccccccccCceeEEcCCCCHHHHHHHHHHCCCCeEEEEcCCCcEEEEEehHhHhhhc
Q 026495 82 VYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALD 141 (237)
Q Consensus 82 ~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~ 141 (237)
..+++++|++ ++.++++++++.+|+++|.+++++++||+| +|+++|+||..||++++
T Consensus 104 ~~~v~~im~~--~~~tv~~~~~l~~a~~~m~~~~~~~lpVvd-~g~lvGivt~~Dil~~l 160 (170)
T 4esy_A 104 KLTASAVMTQ--PVVTAAPEDSVGSIADQMRRHGIHRIPVVQ-DGVPVGIVTRRDLLKLL 160 (170)
T ss_dssp TCBHHHHCBC--CSCCBCTTSBHHHHHHHHHHTTCSEEEEEE-TTEEEEEEEHHHHTTTS
T ss_pred ccchhhhccc--CcccCCcchhHHHHHHHHHHcCCcEEEEEE-CCEEEEEEEHHHHHHHH
Confidence 5689999998 899999999999999999999999999998 59999999999999854
No 78
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=98.91 E-value=3.1e-09 Score=76.88 Aligned_cols=108 Identities=19% Similarity=0.205 Sum_probs=74.5
Q ss_pred hccCCEEEEecCccchhHHH-hccCCCceEEecCCc-e-eeeehhhhcccCCCCCcccccccccccCceeEEcCCCCHHH
Q 026495 30 ALQLPCLLLSRPGCRVFSVL-ATSSDRVSALRRSSA-V-FASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDE 106 (237)
Q Consensus 30 ~~~v~~li~~~~~~~v~~~~-~~~~~~v~v~~~sp~-~-~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~ 106 (237)
...+.++....+..++.+.+ ......+++..+... . ......+...... ...+++++|.+ ++.++++++++.+
T Consensus 8 ~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~G~vt~~dl~~~~~~--~~~~v~~~~~~--~~~~v~~~~~l~~ 83 (122)
T 3kpb_A 8 SKPPITAHSNISIMEAAKILIKHNINHLPIVDEHGKLVGIITSWDIAKALAQ--NKKTIEEIMTR--NVITAHEDEPVDH 83 (122)
T ss_dssp CSCCCCEETTSBHHHHHHHHHHHTCSCEEEECTTSBEEEEECHHHHHHHHHT--TCCBGGGTSBS--SCCCEETTSBHHH
T ss_pred CCCCEEeCCCCcHHHHHHHHHHcCCCeEEEECCCCCEEEEEEHHHHHHHHHh--cccCHHHHhcC--CCeEECCCCCHHH
Confidence 33444444333344455555 555667788763322 2 3233222221111 23389999988 7899999999999
Q ss_pred HHHHHHHCCCCeEEEEcCCCcEEEEEehHhHhhhc
Q 026495 107 ALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALD 141 (237)
Q Consensus 107 ~~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~ 141 (237)
+++.|.+++.+.+||+|++|+++|+||..|+++++
T Consensus 84 ~~~~~~~~~~~~l~Vvd~~g~~~Givt~~dl~~~l 118 (122)
T 3kpb_A 84 VAIKMSKYNISGVPVVDDYRRVVGIVTSEDISRLF 118 (122)
T ss_dssp HHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHH
T ss_pred HHHHHHHhCCCeEEEECCCCCEEEEEeHHHHHHHh
Confidence 99999999999999999889999999999999753
No 79
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=98.91 E-value=3.3e-09 Score=77.88 Aligned_cols=94 Identities=18% Similarity=0.239 Sum_probs=68.8
Q ss_pred chhHHH-hccCCCceEEecC--Cce-eeeehhhhcccCCCCCcccccccccccCceeEEcCCCCHHHHHHHHHHCCCCeE
Q 026495 44 RVFSVL-ATSSDRVSALRRS--SAV-FASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGF 119 (237)
Q Consensus 44 ~v~~~~-~~~~~~v~v~~~s--p~~-~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~ 119 (237)
++.+.+ ......+|+..+. ... ......+...........+++++|.+ +.++++++++.++++.|.+++.+.+
T Consensus 29 ~a~~~m~~~~~~~~pVvd~~~~~~~Givt~~dl~~~~~~~~~~~~v~~~m~~---~~~v~~~~~l~~~~~~m~~~~~~~~ 105 (130)
T 3i8n_A 29 EFLDKHKDTPFSRPLVYSEQKDNIIGFVHRLELFKMQQSGSGQKQLGAVMRP---IQVVLNNTALPKVFDQMMTHRLQLA 105 (130)
T ss_dssp HHHHHTTTCSCSCCEEESSSTTCEEEECCHHHHHHHHHTTTTTSBHHHHSEE---CCEEETTSCHHHHHHHHHHHTCCEE
T ss_pred HHHHHHHhCCCCEEEEEeCCCCcEEEEEEHHHHHHHHhcCCCcCCHHHHhcC---CcCcCCCCcHHHHHHHHHHcCCeEE
Confidence 334444 4556678888743 222 33333333222223346789999954 7899999999999999999999999
Q ss_pred EEEcCCCcEEEEEehHhHhhh
Q 026495 120 PVIDDDWKLVGLVSDYDLLAL 140 (237)
Q Consensus 120 pVvd~~~~~~Givt~~dl~~~ 140 (237)
||+|++|+++|+||..|+++.
T Consensus 106 ~Vvd~~g~~vGivt~~dil~~ 126 (130)
T 3i8n_A 106 LVVDEYGTVLGLVTLEDIFEH 126 (130)
T ss_dssp EEECTTSCEEEEEEHHHHHHH
T ss_pred EEEcCCCCEEEEEEHHHHHHH
Confidence 999988999999999999974
No 80
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=98.89 E-value=6.6e-09 Score=76.30 Aligned_cols=111 Identities=17% Similarity=0.199 Sum_probs=76.9
Q ss_pred hhhccCCEEEEecCccchhHHH-hccCCCceEEecCCc-eeeeehhhhcc-cCCCCCcccccccccccCceeEEcCCCCH
Q 026495 28 SFALQLPCLLLSRPGCRVFSVL-ATSSDRVSALRRSSA-VFASGTLTANS-AAPSSGVYTVGDFMTTKEELHVVKPTTTV 104 (237)
Q Consensus 28 ai~~~v~~li~~~~~~~v~~~~-~~~~~~v~v~~~sp~-~~~~~~~~~~~-~~~~~~~~~v~~im~~~~~~~~v~~~~~l 104 (237)
.+...+.++....+..++.+.+ ......+++..+... .......+... ........+++++|.+ ++.++++++++
T Consensus 9 im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~Givt~~dl~~~~~~~~~~~~~v~~~~~~--~~~~v~~~~~l 86 (133)
T 2ef7_A 9 YMKTQVISVTKDAKLNDIAKVMTEKNIGSVIVVDGNKPVGIITERDIVKAIGKGKSLETKAEEFMTA--SLITIREDSPI 86 (133)
T ss_dssp TSBCSCCEEETTCBHHHHHHHHHHHTCSEEEEEETTEEEEEEEHHHHHHHHHTTCCTTCBGGGTSEE--CCCCEETTSBH
T ss_pred hccCCCEEECCCCcHHHHHHHHHhcCCCEEEEEECCEEEEEEcHHHHHHHHhcCCCcccCHHHHcCC--CCEEECCCCCH
Confidence 3444455554444444555555 556667788763222 23233322211 1122235789999988 78999999999
Q ss_pred HHHHHHHHHCCCCeEEEEcCCCcEEEEEehHhHhhh
Q 026495 105 DEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLAL 140 (237)
Q Consensus 105 ~~~~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~ 140 (237)
.++++.|.+++.+.+||+|++|+++|+||..|+++.
T Consensus 87 ~~~~~~~~~~~~~~l~Vvd~~g~~~Giit~~dll~~ 122 (133)
T 2ef7_A 87 TGALALMRQFNIRHLPVVDDKGNLKGIISIRDITRA 122 (133)
T ss_dssp HHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEECCCCeEEEEEEHHHHHHH
Confidence 999999999999999999988999999999999974
No 81
>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}
Probab=98.88 E-value=7.1e-09 Score=80.04 Aligned_cols=107 Identities=18% Similarity=0.138 Sum_probs=76.0
Q ss_pred ccCCEEEEecCccchhHHH-hccCCCceEEecC--Cce-eeeehhhhcccCCCCCcccccccccccCceeEEcCCCCHHH
Q 026495 31 LQLPCLLLSRPGCRVFSVL-ATSSDRVSALRRS--SAV-FASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDE 106 (237)
Q Consensus 31 ~~v~~li~~~~~~~v~~~~-~~~~~~v~v~~~s--p~~-~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~ 106 (237)
..+.++-...+...+.+.+ ......+|+..+. ... ....+.+..... .....+++++| + +++++++++++.+
T Consensus 52 ~~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~~~~-~~~~~~v~~im-~--~~~~v~~~~~l~~ 127 (172)
T 3lhh_A 52 SDIVFLDLNLPLDANLRTVMQSPHSRFPVCRNNVDDMVGIISAKQLLSESI-AGERLELVDLV-K--NCNFVPNSLSGME 127 (172)
T ss_dssp GGCCCEETTSCHHHHHHHHHTCCCSEEEEESSSTTSEEEEEEHHHHHHHHH-TTCCCCGGGGC-B--CCEEEETTCCHHH
T ss_pred HHeEEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEEHHHHHHHHh-hcCcccHHHHh-c--CCeEeCCCCCHHH
Confidence 3444444444444555555 5566778888753 222 333333332211 12367899999 5 6899999999999
Q ss_pred HHHHHHHCCCCeEEEEcCCCcEEEEEehHhHhhhc
Q 026495 107 ALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALD 141 (237)
Q Consensus 107 ~~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~ 141 (237)
+++.|.+++.+.+||+|++|+++|+||..|+++.+
T Consensus 128 a~~~m~~~~~~~~pVvd~~g~lvGiit~~Dil~~l 162 (172)
T 3lhh_A 128 LLEHFRTTGSQMVFVVDEYGDLKGLVTLQDMMDAL 162 (172)
T ss_dssp HHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHH
T ss_pred HHHHHHHcCCeEEEEEeCCCCEEEEeeHHHHHHHH
Confidence 99999999999999999889999999999999753
No 82
>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A
Probab=98.88 E-value=1e-08 Score=76.14 Aligned_cols=111 Identities=16% Similarity=0.049 Sum_probs=76.2
Q ss_pred hhhhccCCEEEEecCccchhHHH-hccCCCceEEecCC---ce-eeeehhhhccc-CCCCCcccccccccccCceeEEcC
Q 026495 27 TSFALQLPCLLLSRPGCRVFSVL-ATSSDRVSALRRSS---AV-FASGTLTANSA-APSSGVYTVGDFMTTKEELHVVKP 100 (237)
Q Consensus 27 ~ai~~~v~~li~~~~~~~v~~~~-~~~~~~v~v~~~sp---~~-~~~~~~~~~~~-~~~~~~~~v~~im~~~~~~~~v~~ 100 (237)
..+...+.++....+..++.+.+ ......+++..+.. .. ......+.... .......+++++|.+ ++.++++
T Consensus 9 ~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~~~Givt~~dl~~~~~~~~~~~~~v~~~m~~--~~~~v~~ 86 (141)
T 2rih_A 9 ELLKRPPVSLPETATIREVATELAKNRVGLAVLTARDNPKRPVAVVSERDILRAVAQRLDLDGPAMPIANS--PITVLDT 86 (141)
T ss_dssp GGCCSCCEEEETTCBHHHHHHHHHHHTCSEEEEEETTEEEEEEEEEEHHHHHHHHHTTCCTTSBSGGGCBC--CCEEETT
T ss_pred HHhcCCCeEeCCCCcHHHHHHHHHHcCCCEEEEEcCCCcceeEEEEEHHHHHHHHhcCCCCCCCHHHHcCC--CCeEEcC
Confidence 33444444444333344445555 55566788887442 22 22322222111 112236789999988 7999999
Q ss_pred CCCHHHHHHHHHHCCCCeEEEEcCCCcEEEEEehHhHhhh
Q 026495 101 TTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLAL 140 (237)
Q Consensus 101 ~~~l~~~~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~ 140 (237)
+ ++.++++.|.+++.+.+||+|++|+++|+||.+||++.
T Consensus 87 ~-~l~~a~~~m~~~~~~~l~Vvd~~g~~~Giit~~dll~~ 125 (141)
T 2rih_A 87 D-PVHVAAEKMRRHNIRHVVVVNKNGELVGVLSIRDLCFE 125 (141)
T ss_dssp S-BHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHSC
T ss_pred C-CHHHHHHHHHHcCCeEEEEEcCCCcEEEEEEHHHHHHH
Confidence 9 99999999999999999999988999999999999864
No 83
>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}
Probab=98.88 E-value=8.9e-09 Score=78.16 Aligned_cols=103 Identities=15% Similarity=0.124 Sum_probs=74.5
Q ss_pred cCCEEEEecCccchhHHH-hccCCCceEEecCC--ce-eeeehhhhcccCCCCCcccccccccccCceeEEcCCCCHHHH
Q 026495 32 QLPCLLLSRPGCRVFSVL-ATSSDRVSALRRSS--AV-FASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEA 107 (237)
Q Consensus 32 ~v~~li~~~~~~~v~~~~-~~~~~~v~v~~~sp--~~-~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~ 107 (237)
.+.++....+...+.+.+ ......+|+..+.. .. ....+.+....... ...+++++|++ +.++++++++.++
T Consensus 49 ~~~~v~~~~~i~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~~~~~~-~~~~v~~im~~---~~~v~~~~~l~~a 124 (156)
T 3oi8_A 49 RMNVLKENDSIERITAYVIDTAHSRFPVIGEDKDEVLGILHAKDLLKYMFNP-EQFHLKSILRP---AVFVPEGKSLTAL 124 (156)
T ss_dssp GCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGSSCG-GGCCHHHHCBC---CCEEETTSBHHHH
T ss_pred HeEEECCCCCHHHHHHHHHHCCCCEEEEEcCCCCcEEEEEEHHHHHHHHHcC-CcccHHHHcCC---CEEECCCCCHHHH
Confidence 344444444444555555 56677888887532 22 33333333322122 56789999976 7899999999999
Q ss_pred HHHHHHCCCCeEEEEcCCCcEEEEEehHhHh
Q 026495 108 LEILVEKRITGFPVIDDDWKLVGLVSDYDLL 138 (237)
Q Consensus 108 ~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~ 138 (237)
++.|.+++.+.+||+|++|+++|+||..|++
T Consensus 125 ~~~m~~~~~~~~~Vvd~~g~~~Givt~~Dil 155 (156)
T 3oi8_A 125 LKEFREQRNHMAIVIDEYGGTSGLVTFEDII 155 (156)
T ss_dssp HHHHHHTTCCEEEEECTTSSEEEEEEHHHHC
T ss_pred HHHHHhcCCeEEEEECCCCCEEEEEEHHHhc
Confidence 9999999999999999889999999999986
No 84
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=98.88 E-value=4.6e-09 Score=78.84 Aligned_cols=105 Identities=17% Similarity=0.266 Sum_probs=74.9
Q ss_pred cCCEEEEecCccchhHHH-hccCCCceEEecC--Cce-eeeehhhhcccCCCCCcccccccccccCceeEEcCCCCHHHH
Q 026495 32 QLPCLLLSRPGCRVFSVL-ATSSDRVSALRRS--SAV-FASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEA 107 (237)
Q Consensus 32 ~v~~li~~~~~~~v~~~~-~~~~~~v~v~~~s--p~~-~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~ 107 (237)
.+.++-...+...+.+.+ ......+|+..+. ... ......+...... ....+++++| + ++.++++++++.++
T Consensus 34 ~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~~~~~-~~~~~v~~~m-~--~~~~v~~~~~l~~~ 109 (148)
T 3lv9_A 34 DMVCIYESDSEEKILAILKEEGVTRYPVCRKNKDDILGFVHIRDLYNQKIN-ENKIELEEIL-R--DIIYISENLTIDKA 109 (148)
T ss_dssp TCCCEETTCCHHHHHHHHHHSCCSEEEEESSSTTSEEEEEEHHHHHHHHHH-HSCCCGGGTC-B--CCEEEETTSBHHHH
T ss_pred HeEEECCCCCHHHHHHHHHHCCCCEEEEEcCCCCcEEEEEEHHHHHHHHhc-CCCccHHHhc-C--CCeEECCCCCHHHH
Confidence 455554444445555555 5667788888753 222 3333333221101 1166899999 5 68999999999999
Q ss_pred HHHHHHCCCCeEEEEcCCCcEEEEEehHhHhhh
Q 026495 108 LEILVEKRITGFPVIDDDWKLVGLVSDYDLLAL 140 (237)
Q Consensus 108 ~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~ 140 (237)
++.|.+++.+.+||+|++|+++|+||..|+++.
T Consensus 110 ~~~m~~~~~~~l~Vvd~~g~~~Giit~~dil~~ 142 (148)
T 3lv9_A 110 LERIRKEKLQLAIVVDEYGGTSGVVTIEDILEE 142 (148)
T ss_dssp HHHHHHHTCSEEEEECTTSSEEEEEEHHHHHHH
T ss_pred HHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHH
Confidence 999999999999999988999999999999974
No 85
>1pvm_A Conserved hypothetical protein TA0289; structural genomics, CBS domain, PSI, protein structure initiative; 1.50A {Thermoplasma acidophilum dsm 1728} SCOP: d.37.1.1 g.41.13.1 PDB: 2qh1_A
Probab=98.86 E-value=1.4e-08 Score=79.05 Aligned_cols=113 Identities=13% Similarity=0.113 Sum_probs=81.5
Q ss_pred hhhhhccCCEEEEecCccchhHHH-hccCCCceEEecC-Cc-eeeeehhhhccc---CCCCCcccccccccccCceeEEc
Q 026495 26 RTSFALQLPCLLLSRPGCRVFSVL-ATSSDRVSALRRS-SA-VFASGTLTANSA---APSSGVYTVGDFMTTKEELHVVK 99 (237)
Q Consensus 26 ~~ai~~~v~~li~~~~~~~v~~~~-~~~~~~v~v~~~s-p~-~~~~~~~~~~~~---~~~~~~~~v~~im~~~~~~~~v~ 99 (237)
...+...+..+....+..++.+.+ ......+++..+. .. .......+.... .......+++++|.+ +++++.
T Consensus 12 ~~im~~~~~~v~~~~~l~ea~~~~~~~~~~~~pVvd~~g~~vGivt~~dl~~~~~~~~~~~~~~~v~~im~~--~~~~v~ 89 (184)
T 1pvm_A 12 EKIMNSNFKTVNWNTTVFDAVKIMNENHLYGLVVKDDNGNDVGLLSERSIIKRFIPRNKKPDEVPIRLVMRK--PIPKVK 89 (184)
T ss_dssp GGTSBTTCCEEETTCBHHHHHHHHHHHTCCEEEEECTTSCEEEEEEHHHHHHHTGGGCCCGGGSBGGGTSBS--SCCEEE
T ss_pred HHhcCCCCeEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHhhcccCcccCCHHHHhCC--CCcEEC
Confidence 345555666665554455555556 5666778888632 22 233333332211 123456789999998 789999
Q ss_pred CCCCHHHHHHHHHHCCCCeEEEEcCCCcEEEEEehHhHhhh
Q 026495 100 PTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLAL 140 (237)
Q Consensus 100 ~~~~l~~~~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~ 140 (237)
+++++.++++.|.+++.+.+||+|++|+++|+||..||+++
T Consensus 90 ~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~Givt~~dll~~ 130 (184)
T 1pvm_A 90 SDYDVKDVAAYLSENGLERCAVVDDPGRVVGIVTLTDLSRY 130 (184)
T ss_dssp TTCBHHHHHHHHHHHTCSEEEEECTTCCEEEEEEHHHHTTT
T ss_pred CCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHHHH
Confidence 99999999999999999999999988999999999999975
No 86
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=98.86 E-value=6.2e-09 Score=76.59 Aligned_cols=106 Identities=15% Similarity=0.057 Sum_probs=73.3
Q ss_pred cCCEEEEecCccchhHHH-hccCCCceEEecCC--c-eeeeehhhhcccCC--CCCcccccccccccCceeEEcCCCCHH
Q 026495 32 QLPCLLLSRPGCRVFSVL-ATSSDRVSALRRSS--A-VFASGTLTANSAAP--SSGVYTVGDFMTTKEELHVVKPTTTVD 105 (237)
Q Consensus 32 ~v~~li~~~~~~~v~~~~-~~~~~~v~v~~~sp--~-~~~~~~~~~~~~~~--~~~~~~v~~im~~~~~~~~v~~~~~l~ 105 (237)
.+.++-...+..++.+.+ ......+|+..+.. . .....+.+...... .....+++++|. ++.++++++++.
T Consensus 13 ~~~~v~~~~~v~~a~~~m~~~~~~~~pVv~~~~~~lvGivt~~dl~~~~~~~~~~~~~~v~~~m~---~~~~v~~~~~l~ 89 (130)
T 3hf7_A 13 EIVGIDINDDWKSIVRQLTHSPHGRIVLYRDSLDDAISMLRVREAYRLMTEKKEFTKEIMLRAAD---EIYFVPEGTPLS 89 (130)
T ss_dssp GCCEEETTSCHHHHHHHHHTCSSSEEEEESSSGGGEEEEEEHHHHHHHHTSSSCCCHHHHHHHSB---CCCEEETTCBHH
T ss_pred HEEEEcCCCCHHHHHHHHHHCCCCeEEEEcCCCCcEEEEEEHHHHHHHHhccCccchhhHHHhcc---CCeEeCCCCcHH
Confidence 344444344344444555 55566778875321 2 23333333322121 234567899995 488999999999
Q ss_pred HHHHHHHHCCCCeEEEEcCCCcEEEEEehHhHhhh
Q 026495 106 EALEILVEKRITGFPVIDDDWKLVGLVSDYDLLAL 140 (237)
Q Consensus 106 ~~~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~ 140 (237)
++++.|.+++.+.+||+|++|+++|+||.+|+++.
T Consensus 90 ~~~~~m~~~~~~~~~Vvd~~g~lvGiit~~Dil~~ 124 (130)
T 3hf7_A 90 TQLVKFQRNKKKVGLVVDEYGDIQGLVTVEDILEE 124 (130)
T ss_dssp HHHHHHHHHCCCEEEEECTTSCEEEEEEHHHHHHH
T ss_pred HHHHHHHhcCCeEEEEEcCCCCEEEEeeHHHHHHH
Confidence 99999999999999999988999999999999974
No 87
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=98.85 E-value=1.9e-08 Score=80.07 Aligned_cols=111 Identities=16% Similarity=0.110 Sum_probs=75.4
Q ss_pred hhhhccCCEEEEecCccchhHHHhc----cCCCceEEecCCceeeeehhhhcccCCCCCcccccccccccCceeEEcCCC
Q 026495 27 TSFALQLPCLLLSRPGCRVFSVLAT----SSDRVSALRRSSAVFASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTT 102 (237)
Q Consensus 27 ~ai~~~v~~li~~~~~~~v~~~~~~----~~~~v~v~~~sp~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~ 102 (237)
..+...+.++-...+...+.+.+.. ....+++..+...-.+......+ .......+++++|.+ ++.++++++
T Consensus 58 ~iM~~~~~~v~~~~tv~eal~~~~~~~~~~~~~~~Vvd~~~~lvGivt~~dl--l~~~~~~~v~~im~~--~~~~v~~~~ 133 (205)
T 3kxr_A 58 RYTDHQMLVLSDKATVAQAQRFFRRIELDCNDNLFIVDEADKYLGTVRRYDI--FKHEPHEPLISLLSE--DSRALTANT 133 (205)
T ss_dssp GGCBCCCCEEETTCBHHHHHHHHHHCCCTTCCEEEEECTTCBEEEEEEHHHH--TTSCTTSBGGGGCCS--SCCCEETTS
T ss_pred hhccCceEEECCCCcHHHHHHHHHhhCccCeeEEEEEcCCCeEEEEEEHHHH--HhCCCcchHHHHhcC--CCeEECCCC
Confidence 4455556555544434444444422 33455666532211222222222 122346689999988 799999999
Q ss_pred CHHHHHHHHHHCCCCeEEEEcCCCcEEEEEehHhHhhhc
Q 026495 103 TVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALD 141 (237)
Q Consensus 103 ~l~~~~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~ 141 (237)
++.++++.|.+++.+.+||+|++|+++|+||..|++..+
T Consensus 134 ~l~~a~~~m~~~~~~~lpVVD~~g~lvGiIT~~Dil~~i 172 (205)
T 3kxr_A 134 TLLDAAEAIEHSREIELPVIDDAGELIGRVTLRAATALV 172 (205)
T ss_dssp CHHHHHHHHHTSSCSEEEEECTTSBEEEEEEHHHHHHHH
T ss_pred CHHHHHHHHHhcCCCEEEEEcCCCeEEEEEEHHHHHHHH
Confidence 999999999999999999999999999999999999753
No 88
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=98.82 E-value=1.2e-08 Score=76.40 Aligned_cols=60 Identities=33% Similarity=0.529 Sum_probs=54.2
Q ss_pred CCcccccccccccCceeEEcCCCCHHHHHHHHHHCCCCeEEEEcCCCcEEEEEehHhHhhhc
Q 026495 80 SGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALD 141 (237)
Q Consensus 80 ~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~ 141 (237)
....+++++|.+ +++++++++++.++++.|.+++.+.+||+|++|+++|+||.+||++.+
T Consensus 82 ~~~~~v~~~m~~--~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Giit~~dil~~~ 141 (152)
T 4gqw_A 82 TNGKLVGDLMTP--APLVVEEKTNLEDAAKILLETKYRRLPVVDSDGKLVGIITRGNVVRAA 141 (152)
T ss_dssp --CCBHHHHSEE--SCCCEESSSBHHHHHHHHHHSSCCEEEEECTTSBEEEEEEHHHHHHHH
T ss_pred hccccHHHhcCC--CceEECCCCcHHHHHHHHHHCCCCEEEEECCCCcEEEEEEHHHHHHHH
Confidence 345689999998 788999999999999999999999999999889999999999999753
No 89
>1pbj_A Hypothetical protein; structural genomics, domain, PSI, protein structure initiative; 1.40A {Methanothermobacter thermautotrophicusdelta H} SCOP: d.37.1.1
Probab=98.79 E-value=1.3e-08 Score=73.79 Aligned_cols=110 Identities=15% Similarity=0.209 Sum_probs=75.1
Q ss_pred hhccCCEEEEecCccchhHHH-hccCCCceEEecCCce-eeeehhhhc--ccCCCCCcccccccccccCceeEEcCCCCH
Q 026495 29 FALQLPCLLLSRPGCRVFSVL-ATSSDRVSALRRSSAV-FASGTLTAN--SAAPSSGVYTVGDFMTTKEELHVVKPTTTV 104 (237)
Q Consensus 29 i~~~v~~li~~~~~~~v~~~~-~~~~~~v~v~~~sp~~-~~~~~~~~~--~~~~~~~~~~v~~im~~~~~~~~v~~~~~l 104 (237)
+...+..+....+..++.+.+ ......+++..+.... ......+.. .........+++++|.+ ++.++++++++
T Consensus 7 m~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~G~it~~dl~~~~~~~~~~~~~~v~~~m~~--~~~~v~~~~~l 84 (125)
T 1pbj_A 7 MVTDVDTIDITASLEDVLRNYVENAKGSSVVVKEGVRVGIVTTWDVLEAIAEGDDLAEVKVWEVMER--DLVTISPRATI 84 (125)
T ss_dssp CBCSCCEEETTCBHHHHHHHHHHHCCCEEEEEETTEEEEEEEHHHHHHHHHHTCCTTTSBHHHHCBC--GGGEECTTSCH
T ss_pred cCCCceEECCCCcHHHHHHHHHHcCCCEEEEEeCCeeEEEEeHHHHHHHHhcCCcccccCHHHHcCC--CCeEECCCCCH
Confidence 334444444333344444455 4556667777622222 222222221 11223356789999998 79999999999
Q ss_pred HHHHHHHHHCCCCeEEEEcCCCcEEEEEehHhHhhhc
Q 026495 105 DEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALD 141 (237)
Q Consensus 105 ~~~~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~ 141 (237)
.++++.|.+++.+.+||+|+ |+++|+||.+|+++.+
T Consensus 85 ~~~~~~~~~~~~~~l~Vvd~-~~~~Gvit~~dl~~~l 120 (125)
T 1pbj_A 85 KEAAEKMVKNVVWRLLVEED-DEIIGVISATDILRAK 120 (125)
T ss_dssp HHHHHHHHHHTCSEEEEEET-TEEEEEEEHHHHHHHH
T ss_pred HHHHHHHHhcCCcEEEEEEC-CEEEEEEEHHHHHHHH
Confidence 99999999999999999997 9999999999999753
No 90
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=98.78 E-value=5.5e-09 Score=79.62 Aligned_cols=105 Identities=18% Similarity=0.217 Sum_probs=72.3
Q ss_pred cCCEEEEecCccchhHHH-hccCCCceEEecCCce--eeeehhhhcc------cCCCCCcccccccccccCceeEEcCCC
Q 026495 32 QLPCLLLSRPGCRVFSVL-ATSSDRVSALRRSSAV--FASGTLTANS------AAPSSGVYTVGDFMTTKEELHVVKPTT 102 (237)
Q Consensus 32 ~v~~li~~~~~~~v~~~~-~~~~~~v~v~~~sp~~--~~~~~~~~~~------~~~~~~~~~v~~im~~~~~~~~v~~~~ 102 (237)
.+.++..+.+..++.+.+ ....+++|+..+...- ....+.+... ........+++++|.+ ++.++++++
T Consensus 26 ~v~~v~~~~t~~~a~~~m~~~~~s~~pVvd~~~~lvGiit~~Di~~~~~~~~~~~~~~~~~~v~~im~~--~~~~v~~~~ 103 (156)
T 3k6e_A 26 NLAVLIDTHNADHATLLLSQMTYTRVPVVTDEKQFVGTIGLRDIMAYQMEHDLSQEIMADTDIVHMTKT--DVAVVSPDF 103 (156)
T ss_dssp SSCCEETTSBHHHHHHHHTTSSSSEEEEECC-CBEEEEEEHHHHHHHHHHHTCCHHHHTTSBGGGTCBC--SCCCBCTTC
T ss_pred HeEEECCcCCHHHHHHHHHHcCCcEEEEEcCCCcEEEEEEecchhhhhhhcccccccccccCHHHhhcC--Cceeccccc
Confidence 344444444444555555 6677788888643211 2222222110 0112346789999998 899999999
Q ss_pred CHHHHHHHHHHCCCCeEEEEcCCCcEEEEEehHhHhhh
Q 026495 103 TVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLAL 140 (237)
Q Consensus 103 ~l~~~~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~ 140 (237)
++.++++.|.+++ .+||+|++|+++|+||.+|+++.
T Consensus 104 ~l~~~~~~m~~~~--~lpVVd~~g~l~GiiT~~Dil~~ 139 (156)
T 3k6e_A 104 TITEVLHKLVDES--FLPVVDAEGIFQGIITRKSILKA 139 (156)
T ss_dssp CHHHHHHHTTTSS--EEEEECTTSBEEEEEEHHHHHHH
T ss_pred HHHHHHHHHHHcC--CeEEEecCCEEEEEEEHHHHHHH
Confidence 9999999998765 59999999999999999999975
No 91
>2p9m_A Hypothetical protein MJ0922; structural genomics, collaboratory for structural genomics, secsg; 2.59A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID}
Probab=98.77 E-value=1.7e-08 Score=74.49 Aligned_cols=111 Identities=19% Similarity=0.230 Sum_probs=76.7
Q ss_pred hhhccCCEEEEecCccchhHHH-hccCCCceEEecCC--ceeeeehhh-hccc-CCCCCcccccccccccCceeEEcCCC
Q 026495 28 SFALQLPCLLLSRPGCRVFSVL-ATSSDRVSALRRSS--AVFASGTLT-ANSA-APSSGVYTVGDFMTTKEELHVVKPTT 102 (237)
Q Consensus 28 ai~~~v~~li~~~~~~~v~~~~-~~~~~~v~v~~~sp--~~~~~~~~~-~~~~-~~~~~~~~v~~im~~~~~~~~v~~~~ 102 (237)
.+...+.++....+..++.+.+ ......+++..+.. ........+ .... .......+++++|.+ ++.++++++
T Consensus 13 im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~~~~~~v~~~m~~--~~~~v~~~~ 90 (138)
T 2p9m_A 13 VMTKNVITAKRHEGVVEAFEKMLKYKISSLPVIDDENKVIGIVTTTDIGYNLIRDKYTLETTIGDVMTK--DVITIHEDA 90 (138)
T ss_dssp TSBCSCCCEETTSBHHHHHHHHHHHTCCEEEEECTTCBEEEEEEHHHHHHHHTTTCCCSSCBHHHHSCS--SCCCEETTS
T ss_pred hhcCCceEECCCCcHHHHHHHHHHCCCcEEEEECCCCeEEEEEEHHHHHHHHHhhcccCCcCHHHHhCC--CcEEECCCC
Confidence 3444555554444344455555 55566778886332 223333333 2111 123456789999998 789999999
Q ss_pred CHHHHHHHHHHCC-----CCeEEEEcCCCcEEEEEehHhHhhh
Q 026495 103 TVDEALEILVEKR-----ITGFPVIDDDWKLVGLVSDYDLLAL 140 (237)
Q Consensus 103 ~l~~~~~~~~~~~-----~~~~pVvd~~~~~~Givt~~dl~~~ 140 (237)
++.++++.|.+++ .+.+||+|++|+++|+||..|+++.
T Consensus 91 ~l~~~~~~~~~~~~~~~~~~~l~Vvd~~g~~~Giit~~dll~~ 133 (138)
T 2p9m_A 91 SILEAIKKMDISGKKEEIINQLPVVDKNNKLVGIISDGDIIRT 133 (138)
T ss_dssp BHHHHHHHHTCC-----CCCEEEEECTTSBEEEEEEHHHHHHH
T ss_pred CHHHHHHHHHhcCCccccccEEEEECCCCeEEEEEEHHHHHHH
Confidence 9999999999999 9999999988999999999999864
No 92
>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}
Probab=98.76 E-value=1.3e-08 Score=76.95 Aligned_cols=106 Identities=13% Similarity=0.131 Sum_probs=73.3
Q ss_pred cCCEEEEecCccchhHHH-hccCCCceEE-ecC---CceeeeehhhhcccCCCCCcccccccccccCceeEEcCCCCHHH
Q 026495 32 QLPCLLLSRPGCRVFSVL-ATSSDRVSAL-RRS---SAVFASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDE 106 (237)
Q Consensus 32 ~v~~li~~~~~~~v~~~~-~~~~~~v~v~-~~s---p~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~ 106 (237)
.+.++-...+...+.+.+ ......+|+. .+. .........+..... .....+++++| + ++.++++++++.+
T Consensus 31 ~~~~v~~~~~~~~a~~~m~~~~~~~~pVv~d~~~~~lvGivt~~dl~~~~~-~~~~~~v~~~m-~--~~~~v~~~~~l~~ 106 (153)
T 3oco_A 31 SMSVVDVDETIADALLLYLEEQYSRFPVTADNDKDKIIGYAYNYDIVRQAR-IDDKAKISTIM-R--DIVSVPENMKVPD 106 (153)
T ss_dssp GCCCEETTSBHHHHHHHHHHHCCSEEEEEETTEEEEEEEEEEHHHHHHHHH-HHTTSBGGGTC-B--CCEEEETTSBHHH
T ss_pred heEEEcCCCCHHHHHHHHHhCCCCEEEEEECCCCCcEEEEEEHHHHHhHHh-cCCCCcHHHHh-C--CCeEECCCCCHHH
Confidence 344444334344445555 5666778888 321 122323332221111 11266899999 5 6999999999999
Q ss_pred HHHHHHHCCCCeEEEEcCCCcEEEEEehHhHhhhc
Q 026495 107 ALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALD 141 (237)
Q Consensus 107 ~~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~ 141 (237)
++..|.+++.+.+||+|++|+++|+||..|+++.+
T Consensus 107 ~~~~m~~~~~~~lpVvd~~g~~vGivt~~dil~~l 141 (153)
T 3oco_A 107 VMEEMSAHRVPMAIVIDEYGGTSGIITDKDVYEEL 141 (153)
T ss_dssp HHHHHHHTTCSCEEEECTTSCEEEEECHHHHHHHH
T ss_pred HHHHHHHcCCcEEEEEeCCCCEEEEeeHHHHHHHH
Confidence 99999999999999999889999999999999753
No 93
>4fry_A Putative signal-transduction protein with CBS DOM; CBS domain,ssgcid, structural genomics, niaid; HET: NAD AMP; 2.10A {Burkholderia ambifaria}
Probab=98.75 E-value=2.1e-08 Score=75.82 Aligned_cols=106 Identities=21% Similarity=0.292 Sum_probs=74.8
Q ss_pred CCEEEEecCccchhHHH-hccCCCceEEecCCce-eeeehhhhccc---CCCCCcccccccccccCceeEEcCCCCHHHH
Q 026495 33 LPCLLLSRPGCRVFSVL-ATSSDRVSALRRSSAV-FASGTLTANSA---APSSGVYTVGDFMTTKEELHVVKPTTTVDEA 107 (237)
Q Consensus 33 v~~li~~~~~~~v~~~~-~~~~~~v~v~~~sp~~-~~~~~~~~~~~---~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~ 107 (237)
+.++....+..++.+.+ ......+++..+.... ......+.... .......+++++|.+ ++.++++++++.++
T Consensus 23 ~~~v~~~~~~~~a~~~~~~~~~~~~~V~~~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~m~~--~~~~v~~~~~l~~~ 100 (157)
T 4fry_A 23 IYTVTKNDFVYDAIKLMAEKGIGALLVVDGDDIAGIVTERDYARKVVLQERSSKATRVEEIMTA--KVRYVEPSQSTDEC 100 (157)
T ss_dssp CCEEETTSBHHHHHHHHHHHTCSEEEEESSSSEEEEEEHHHHHHHSGGGTCCSSSCBHHHHSBS--SCCCBCTTSBHHHH
T ss_pred CeEECCCCcHHHHHHHHHHcCCCEEEEeeCCEEEEEEEHHHHHHHHHhccCCccccCHHHHcCC--CCcEECCCCcHHHH
Confidence 44554444444555555 4555667775433222 33333332211 122357799999998 79999999999999
Q ss_pred HHHHHHCCCCeEEEEcCCCcEEEEEehHhHhhhc
Q 026495 108 LEILVEKRITGFPVIDDDWKLVGLVSDYDLLALD 141 (237)
Q Consensus 108 ~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~ 141 (237)
++.|.+++.+.+||+| +|+++|+||..||++.+
T Consensus 101 ~~~m~~~~~~~lpVvd-~g~~~Giit~~dil~~l 133 (157)
T 4fry_A 101 MALMTEHRMRHLPVLD-GGKLIGLISIGDLVKSV 133 (157)
T ss_dssp HHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHH
T ss_pred HHHHHHcCCCEEEEEE-CCEEEEEEEHHHHHHHH
Confidence 9999999999999999 79999999999999754
No 94
>2rc3_A CBS domain; in SITU proteolysis, BR, structural genomics, PSI-2, protein structure initiative; HET: NAD; 1.60A {Nitrosomonas europaea atcc 19718} SCOP: d.37.1.1
Probab=98.75 E-value=2.4e-08 Score=73.52 Aligned_cols=107 Identities=19% Similarity=0.227 Sum_probs=74.5
Q ss_pred ccCCEEEEecCccchhHHH-hccCCCceEEecCCce-eeeehhhhc-ccC--CCCCcccccccccccCceeEEcCCCCHH
Q 026495 31 LQLPCLLLSRPGCRVFSVL-ATSSDRVSALRRSSAV-FASGTLTAN-SAA--PSSGVYTVGDFMTTKEELHVVKPTTTVD 105 (237)
Q Consensus 31 ~~v~~li~~~~~~~v~~~~-~~~~~~v~v~~~sp~~-~~~~~~~~~-~~~--~~~~~~~v~~im~~~~~~~~v~~~~~l~ 105 (237)
..+.++....+..++.+.+ ......+++..+.... ......+.. ... ......+++++|.+ ++.++++++++.
T Consensus 17 ~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~m~~--~~~~v~~~~~l~ 94 (135)
T 2rc3_A 17 HTVVAIGPDDSVFNAMQKMAADNIGALLVMKDEKLVGILTERDFSRKSYLLDKPVKDTQVKEIMTR--QVAYVDLNNTNE 94 (135)
T ss_dssp CCCCEECTTSBHHHHHHHHHHHTCSEEEEEETTEEEEEEEHHHHHHHGGGSSSCGGGSBGGGTSBC--SCCCBCTTCBHH
T ss_pred CCcEEECCCCcHHHHHHHHHhcCCCEEEEEECCEEEEEEehHHHHHHHHHcCCCcccCCHHHhccC--CCeEECCCCcHH
Confidence 4455544333344445555 4556677877532222 323232221 111 12457799999998 799999999999
Q ss_pred HHHHHHHHCCCCeEEEEcCCCcEEEEEehHhHhhh
Q 026495 106 EALEILVEKRITGFPVIDDDWKLVGLVSDYDLLAL 140 (237)
Q Consensus 106 ~~~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~ 140 (237)
++++.|.+++.+.+||+| +|+++|+||.+|+++.
T Consensus 95 ~~~~~m~~~~~~~lpVvd-~g~~~Giit~~dll~~ 128 (135)
T 2rc3_A 95 DCMALITEMRVRHLPVLD-DGKVIGLLSIGDLVKD 128 (135)
T ss_dssp HHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHH
T ss_pred HHHHHHHHhCCCEEEEEe-CCEEEEEEEHHHHHHH
Confidence 999999999999999999 7999999999999975
No 95
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=98.74 E-value=1.7e-08 Score=77.85 Aligned_cols=58 Identities=31% Similarity=0.524 Sum_probs=54.3
Q ss_pred CcccccccccccCceeEEcCCCCHHHHHHHHHHCCCCeEEEEcCCCcEEEEEehHhHhhh
Q 026495 81 GVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLAL 140 (237)
Q Consensus 81 ~~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~ 140 (237)
...+++++|.+ ++.++++++++.++++.|.+++.+.+||+|++|+++|+||.+||++.
T Consensus 96 ~~~~v~~~m~~--~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~vGiit~~dil~~ 153 (180)
T 3sl7_A 96 YGKVVGDLMTP--SPLVVRDSTNLEDAARLLLETKFRRLPVVDADGKLIGILTRGNVVRA 153 (180)
T ss_dssp TTCBHHHHSEE--SCCCEETTSBHHHHHHHHTTSTTCEEEEECTTCBEEEEEEHHHHHHH
T ss_pred ccccHHHHhCC--CceEeCCCCcHHHHHHHHHHcCCCEEEEECCCCeEEEEEEHHHHHHH
Confidence 45689999998 78999999999999999999999999999988999999999999975
No 96
>2uv4_A 5'-AMP-activated protein kinase subunit gamma-1; transferase, CBS domain, lipid synthesis, fatty acid biosynthesis; HET: AMP; 1.33A {Homo sapiens} PDB: 2uv5_A* 2uv6_A* 2uv7_A*
Probab=98.73 E-value=4e-08 Score=73.97 Aligned_cols=106 Identities=16% Similarity=0.158 Sum_probs=72.1
Q ss_pred CCEEEEecCccchhHHH-hccCCCceEEecCC--ceeeeehhhhcccC-C--CCCccccccccc------ccCceeEEcC
Q 026495 33 LPCLLLSRPGCRVFSVL-ATSSDRVSALRRSS--AVFASGTLTANSAA-P--SSGVYTVGDFMT------TKEELHVVKP 100 (237)
Q Consensus 33 v~~li~~~~~~~v~~~~-~~~~~~v~v~~~sp--~~~~~~~~~~~~~~-~--~~~~~~v~~im~------~~~~~~~v~~ 100 (237)
+.++....+...+.+.+ ......+++..+.. ........+..... . .....++.++|. + +++++.+
T Consensus 31 ~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~vGivt~~dl~~~~~~~~~~~~~~~v~~~m~~~~~~~~--~~~~v~~ 108 (152)
T 2uv4_A 31 IAMVRTTTPVYVALGIFVQHRVSALPVVDEKGRVVDIYSKFDVINLAAEKTYNNLDVSVTKALQHRSHYFE--GVLKCYL 108 (152)
T ss_dssp CCCEETTCBHHHHHHHHHHHCCSEEEEECTTSBEEEEEEHHHHHHHHHCSSCCCTTSBGGGGGGTCCHHHH--TCSEECT
T ss_pred ceEeCCCCcHHHHHHHHHHcCCceEeEECCCCcEEEEEeHHHHHHHhcchhhhhhcchHHHHHhhhhcccC--CCeEECC
Confidence 33333333334444455 45566778876332 22333332222111 1 123568899996 5 6899999
Q ss_pred CCCHHHHHHHHHHCCCCeEEEEcCCCcEEEEEehHhHhhh
Q 026495 101 TTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLAL 140 (237)
Q Consensus 101 ~~~l~~~~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~ 140 (237)
++++.++++.|.+++.+.+||+|++|+++|+||..||++.
T Consensus 109 ~~~l~~a~~~m~~~~~~~lpVvd~~g~~vGiit~~dil~~ 148 (152)
T 2uv4_A 109 HETLETIINRLVEAEVHRLVVVDENDVVKGIVSLSDILQA 148 (152)
T ss_dssp TSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHH
T ss_pred CCcHHHHHHHHHHcCCeEEEEECCCCeEEEEEEHHHHHHH
Confidence 9999999999999999999999988999999999999874
No 97
>3k2v_A Putative D-arabinose 5-phosphate isomerase; KPSF-like protein, CBS domain, structural genomics, PSI-2, P structure initiative; HET: MSE CMK; 1.95A {Klebsiella pneumoniae subsp} PDB: 3fna_A*
Probab=98.73 E-value=4.3e-08 Score=73.58 Aligned_cols=110 Identities=18% Similarity=0.157 Sum_probs=76.9
Q ss_pred hhhhc--cCCEEEEecCccchhHHH-hccCCCceEEecCC-c-eeeeehhhhcccCC--CCCcccccccccccCceeEEc
Q 026495 27 TSFAL--QLPCLLLSRPGCRVFSVL-ATSSDRVSALRRSS-A-VFASGTLTANSAAP--SSGVYTVGDFMTTKEELHVVK 99 (237)
Q Consensus 27 ~ai~~--~v~~li~~~~~~~v~~~~-~~~~~~v~v~~~sp-~-~~~~~~~~~~~~~~--~~~~~~v~~im~~~~~~~~v~ 99 (237)
..+.. .++++....+..++.+.+ ......+++..+.. . .......+...... .....+++++|.+ ++.+++
T Consensus 32 dim~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~~~~~~v~~~m~~--~~~~v~ 109 (149)
T 3k2v_A 32 DIMHTGDEIPHVGLQATLRDALLEITRKNLGMTAICDDDMNIIGIFTDGDLRRVFDTGVDMRDASIADVMTR--GGIRIR 109 (149)
T ss_dssp GTSBCGGGSCEECTTCBHHHHHHHHHHHTSSEEEEECTTCBEEEEEEHHHHHHHHCSSSCCTTCBHHHHSEE--SCCEEC
T ss_pred HHhcCCCCCeEECCCCcHHHHHHHHHhCCCcEEEEECCCCcEEEEecHHHHHHHHhcCCCcccCcHHHHcCC--CCeEEC
Confidence 34444 555554444444555555 55566778887432 2 23333333321122 2357789999998 789999
Q ss_pred CCCCHHHHHHHHHHCCCCeEEEEcCCCcEEEEEehHhHhh
Q 026495 100 PTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLA 139 (237)
Q Consensus 100 ~~~~l~~~~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~ 139 (237)
+++++.++++.|.+++.+.+||+|++ +++|+||..||++
T Consensus 110 ~~~~l~~a~~~m~~~~~~~lpVvd~~-~~~Giit~~dil~ 148 (149)
T 3k2v_A 110 PGTLAVDALNLMQSRHITCVLVADGD-HLLGVVHMHDLLR 148 (149)
T ss_dssp TTCBHHHHHHHHHHHTCSEEEEEETT-EEEEEEEHHHHTC
T ss_pred CCCCHHHHHHHHHHcCCCEEEEecCC-EEEEEEEHHHhhc
Confidence 99999999999999999999999975 9999999999974
No 98
>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1
Probab=98.73 E-value=8.5e-08 Score=70.72 Aligned_cols=111 Identities=18% Similarity=0.177 Sum_probs=75.9
Q ss_pred hhhccCCEEEEecCccchhHHH-hccCCCceEEecC-Cc-eeeeehhhh-cccC-CCCCcccccccccccCceeEEcCCC
Q 026495 28 SFALQLPCLLLSRPGCRVFSVL-ATSSDRVSALRRS-SA-VFASGTLTA-NSAA-PSSGVYTVGDFMTTKEELHVVKPTT 102 (237)
Q Consensus 28 ai~~~v~~li~~~~~~~v~~~~-~~~~~~v~v~~~s-p~-~~~~~~~~~-~~~~-~~~~~~~v~~im~~~~~~~~v~~~~ 102 (237)
.+...++++....+..++.+.+ ......+++..+. .. .......+. .... ......+++++|.+ ++.++++++
T Consensus 12 im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~~~~~~v~~~m~~--~~~~v~~~~ 89 (138)
T 2yzi_A 12 YMTKKLLGVKPSTSVQEASRLMMEFDVGSLVVINDDGNVVGFFTKSDIIRRVIVPGLPYDIPVERIMTR--NLITANVNT 89 (138)
T ss_dssp TCBCCCCEECTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHTTTTCCCTTSBGGGTCBC--SCCEEETTS
T ss_pred HhcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHHhcCCcccCCHHHHhhC--CCeEECCCC
Confidence 3444444444333344444455 4556677887632 22 233333332 1111 12356789999988 799999999
Q ss_pred CHHHHHHHHHHCCCCeEEEEcCCCcEEEEEehHhHhhhc
Q 026495 103 TVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALD 141 (237)
Q Consensus 103 ~l~~~~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~ 141 (237)
++.++++.|.+++.+.+ |+|++|+++|+||..|+++.+
T Consensus 90 ~l~~~~~~m~~~~~~~l-Vvd~~g~~~Giit~~dil~~~ 127 (138)
T 2yzi_A 90 PLGEVLRKMAEHRIKHI-LIEEEGKIVGIFTLSDLLEAS 127 (138)
T ss_dssp BHHHHHHHHHHHTCSEE-EEEETTEEEEEEEHHHHHHHH
T ss_pred cHHHHHHHHHhcCCCEE-EECCCCCEEEEEEHHHHHHHH
Confidence 99999999999999999 999889999999999999753
No 99
>1o50_A CBS domain-containing predicted protein TM0935; CBS-domain PAIR fold, structural genomics, joint center for structural genomics, JCSG; 1.87A {Thermotoga maritima} SCOP: d.37.1.1
Probab=98.71 E-value=2.3e-08 Score=75.78 Aligned_cols=58 Identities=22% Similarity=0.399 Sum_probs=53.3
Q ss_pred CCcccccccccccCceeEEcCCCCHHHHHHHHHHCCCCeEEEEcCCCcEEEEEehHhHhhh
Q 026495 80 SGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLAL 140 (237)
Q Consensus 80 ~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~ 140 (237)
....+++++|.+ ++++++++++.++++.|.+++.+.+||+|++|+++|+||..||++.
T Consensus 93 ~~~~~v~~im~~---~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~vGiit~~dll~~ 150 (157)
T 1o50_A 93 LIAKNASEIMLD---PVYVHMDTPLEEALKLMIDNNIQEMPVVDEKGEIVGDLNSLEILLA 150 (157)
T ss_dssp CSSCBHHHHCBC---CCCBCTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHH
T ss_pred HcCCcHHHHcCC---CeEECCCCCHHHHHHHHHHCCCcEEEEEcCCCEEEEEEEHHHHHHH
Confidence 456789999986 7889999999999999999999999999988999999999999974
No 100
>1y5h_A Hypothetical protein RV2626C; CBS domain, unknown function; 1.50A {Mycobacterium tuberculosis} SCOP: d.37.1.1 PDB: 1xkf_A
Probab=98.70 E-value=3.4e-08 Score=72.46 Aligned_cols=110 Identities=14% Similarity=0.227 Sum_probs=75.6
Q ss_pred hhhccCCEEEEecCccchhHHH-hccCCCceEEecC--Cceeeeehhhh-ccc--CCCCCcccccccccccCceeEEcCC
Q 026495 28 SFALQLPCLLLSRPGCRVFSVL-ATSSDRVSALRRS--SAVFASGTLTA-NSA--APSSGVYTVGDFMTTKEELHVVKPT 101 (237)
Q Consensus 28 ai~~~v~~li~~~~~~~v~~~~-~~~~~~v~v~~~s--p~~~~~~~~~~-~~~--~~~~~~~~v~~im~~~~~~~~v~~~ 101 (237)
.+...+.++....+..++.+.+ ......+++..+. +........+. ... .......+++++|.+ ++.+++++
T Consensus 13 im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~m~~--~~~~v~~~ 90 (133)
T 1y5h_A 13 IMNAGVTCVGEHETLTAAAQYMREHDIGALPICGDDDRLHGMLTDRDIVIKGLAAGLDPNTATAGELARD--SIYYVDAN 90 (133)
T ss_dssp HSEETCCCEETTSBHHHHHHHHHHHTCSEEEEECGGGBEEEEEEHHHHHHTTGGGTCCTTTSBHHHHHTT--CCCCEETT
T ss_pred HhcCCceEeCCCCCHHHHHHHHHHhCCCeEEEECCCCeEEEEEeHHHHHHHHHhcCCCccccCHHHHhcC--CCEEECCC
Confidence 3444555544344344455555 4556677877422 22232332222 111 122346789999988 79999999
Q ss_pred CCHHHHHHHHHHCCCCeEEEEcCCCcEEEEEehHhHhhh
Q 026495 102 TTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLAL 140 (237)
Q Consensus 102 ~~l~~~~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~ 140 (237)
+++.++++.|.+++.+.+||+|+ |+++|+||.+|+++.
T Consensus 91 ~~l~~~~~~m~~~~~~~l~Vvd~-g~~~Giit~~dil~~ 128 (133)
T 1y5h_A 91 ASIQEMLNVMEEHQVRRVPVISE-HRLVGIVTEADIARH 128 (133)
T ss_dssp CCHHHHHHHHHHHTCSEEEEEET-TEEEEEEEHHHHHHT
T ss_pred CCHHHHHHHHHHcCCCEEEEEEC-CEEEEEEEHHHHHHH
Confidence 99999999999999999999997 999999999999975
No 101
>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1
Probab=98.67 E-value=6.1e-08 Score=73.71 Aligned_cols=58 Identities=22% Similarity=0.381 Sum_probs=53.3
Q ss_pred CCcccccccccccCceeEEcCCCCHHHHHHHHHHCCCCeEEEEcCCCcEEEEEehHhHhhh
Q 026495 80 SGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLAL 140 (237)
Q Consensus 80 ~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~ 140 (237)
....+++++|.+ +++++++++++.+++..|.+++.+.+||+|+ |+++|+||..||++.
T Consensus 75 ~~~~~v~~im~~--~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-g~lvGiit~~dil~~ 132 (160)
T 2o16_A 75 AFETPLFEVMHT--DVTSVAPQAGLKESAIYMQKHKIGCLPVVAK-DVLVGIITDSDFVTI 132 (160)
T ss_dssp -CCCBHHHHSCS--CEEEBCTTSBHHHHHHHHHHTTCSCEEEEET-TEEEEEECHHHHHHH
T ss_pred hcccCHHHHhcC--CCeEECCCCCHHHHHHHHHHhCCCEEEEEEC-CEEEEEEEHHHHHHH
Confidence 346789999998 8999999999999999999999999999997 999999999999975
No 102
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=98.67 E-value=6.7e-08 Score=72.40 Aligned_cols=56 Identities=20% Similarity=0.366 Sum_probs=51.8
Q ss_pred CcccccccccccCceeEEcCCCCHHHHHHHHHHCCCCeEEEEcCCCcEEEEEehHhHhhh
Q 026495 81 GVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLAL 140 (237)
Q Consensus 81 ~~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~ 140 (237)
...+++++|.+ ++.++++++++.++++.|.+++. +||+|++|+++|+||..||++.
T Consensus 85 ~~~~v~~~m~~--~~~~v~~~~~l~~a~~~~~~~~~--l~Vvd~~g~~~Giit~~dil~~ 140 (150)
T 3lqn_A 85 EEMKVEQVMKQ--DIPVLKLEDSFAKALEMTIDHPF--ICAVNEDGYFEGILTRRAILKL 140 (150)
T ss_dssp GGCBGGGTCBS--SCCEEETTCBHHHHHHHHHHCSE--EEEECTTCBEEEEEEHHHHHHH
T ss_pred hcCCHHHHhcC--CCceeCCCCCHHHHHHHHHhCCE--EEEECCCCcEEEEEEHHHHHHH
Confidence 56789999998 79999999999999999999886 9999988999999999999975
No 103
>3fhm_A Uncharacterized protein ATU1752; CBS domain, prokaryotic, bound nucleotide, AMP, NADH, struct genomics, PSI-2; HET: AMP NAI; 2.70A {Agrobacterium tumefaciens str}
Probab=98.65 E-value=4e-08 Score=75.10 Aligned_cols=107 Identities=18% Similarity=0.133 Sum_probs=75.3
Q ss_pred cCCEEEEecCccchhHHH-hccCCCceEEecCC--ceeeeehhhhcccC---CCCCcccccccccccCceeEEcCCCCHH
Q 026495 32 QLPCLLLSRPGCRVFSVL-ATSSDRVSALRRSS--AVFASGTLTANSAA---PSSGVYTVGDFMTTKEELHVVKPTTTVD 105 (237)
Q Consensus 32 ~v~~li~~~~~~~v~~~~-~~~~~~v~v~~~sp--~~~~~~~~~~~~~~---~~~~~~~v~~im~~~~~~~~v~~~~~l~ 105 (237)
.+.++....+...+.+.+ ......+++..+.. ........+..... ......+++++|.+ ++.++.+++++.
T Consensus 36 ~~~~v~~~~~l~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~m~~--~~~~v~~~~~l~ 113 (165)
T 3fhm_A 36 DVVTVGPDVSIGEAAGTLHAHKIGAVVVTDADGVVLGIFTERDLVKAVAGQGAASLQQSVSVAMTK--NVVRCQHNSTTD 113 (165)
T ss_dssp CCCEECTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHHHGGGGGTSBGGGTSBS--SCCCBCTTCBHH
T ss_pred CCeEECCCCCHHHHHHHHHHcCCCEEEEEcCCCeEEEEEEHHHHHHHHHhcCCccccCCHHHHhcC--CCeEECCCCcHH
Confidence 355544344344444555 55566778887432 22333333321111 12346789999998 799999999999
Q ss_pred HHHHHHHHCCCCeEEEEcCCCcEEEEEehHhHhhhc
Q 026495 106 EALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALD 141 (237)
Q Consensus 106 ~~~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~ 141 (237)
++++.|.+++.+.+||+|+ |+++|+||..||++.+
T Consensus 114 ~a~~~m~~~~~~~lpVvd~-g~~~Giit~~dil~~~ 148 (165)
T 3fhm_A 114 QLMEIMTGGRFRHVPVEEN-GRLAGIISIGDVVKAR 148 (165)
T ss_dssp HHHHHHHHHTCSEEEEEET-TEEEEEEEHHHHHHHT
T ss_pred HHHHHHHHcCCCEEEEEEC-CEEEEEEEHHHHHHHH
Confidence 9999999999999999998 9999999999999754
No 104
>3fv6_A YQZB protein; CBS domain dimer, metabolism regulator, central glycolytic G regulator, transcription; 1.95A {Bacillus subtilis} PDB: 3fwr_A* 3fws_A*
Probab=98.64 E-value=8.5e-08 Score=72.78 Aligned_cols=98 Identities=18% Similarity=0.236 Sum_probs=71.2
Q ss_pred cchhHHH-hccCCCceEEecCC-ce-eeeehhhhccc--CCCCCcccccccccccCceeEEcCCCCHHHHHHHHHHCCCC
Q 026495 43 CRVFSVL-ATSSDRVSALRRSS-AV-FASGTLTANSA--APSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRIT 117 (237)
Q Consensus 43 ~~v~~~~-~~~~~~v~v~~~sp-~~-~~~~~~~~~~~--~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~ 117 (237)
..+.+.+ ......+++..+.. .. ......+.... .......+++++|.+..++.++++++++.++++.|.+++.+
T Consensus 36 ~~a~~~m~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~~~~~~v~~~m~~~~~~~~v~~~~~l~~a~~~m~~~~~~ 115 (159)
T 3fv6_A 36 YDAICTMFLEDVGTLFVVDRDAVLVGVLSRKDLLRASIGQQELTSVPVHIIMTRMPNITVCRREDYVMDIAKHLIEKQID 115 (159)
T ss_dssp HHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHTSCSCTTTCBGGGTSEETTSCCCBCTTSBHHHHHHHHHHHTCS
T ss_pred HHHHHHHHHCCCCEEEEEcCCCcEEEEEeHHHHHHHhhccCcccCcCHHHHHcCCCCcEEECCCCCHHHHHHHHHHcCCc
Confidence 3344444 55566778887332 22 33333333211 23345778999998643588999999999999999999999
Q ss_pred eEEEEcCCC---cEEEEEehHhHhhh
Q 026495 118 GFPVIDDDW---KLVGLVSDYDLLAL 140 (237)
Q Consensus 118 ~~pVvd~~~---~~~Givt~~dl~~~ 140 (237)
.+||+|++| +++|+||..||+++
T Consensus 116 ~lpVvd~~g~~~~~vGiit~~dil~~ 141 (159)
T 3fv6_A 116 ALPVIKDTDKGFEVIGRVTKTNMTKI 141 (159)
T ss_dssp EEEEEEECSSSEEEEEEEEHHHHHHH
T ss_pred EEEEEeCCCcceeEEEEEEHHHHHHH
Confidence 999999888 99999999999975
No 105
>2oux_A Magnesium transporter; 10001B, structural genomics, PSI-2, P structure initiative, nysgxrc; 2.16A {Enterococcus faecalis} SCOP: a.118.26.1 d.37.1.1
Probab=98.63 E-value=1.2e-07 Score=79.19 Aligned_cols=110 Identities=13% Similarity=0.175 Sum_probs=76.8
Q ss_pred hhhhccCCEEEEecCccchhHHH-hc-----cCCCceEEecCCceeeeehhhhcccCCCCCcccccccccccCceeEEcC
Q 026495 27 TSFALQLPCLLLSRPGCRVFSVL-AT-----SSDRVSALRRSSAVFASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKP 100 (237)
Q Consensus 27 ~ai~~~v~~li~~~~~~~v~~~~-~~-----~~~~v~v~~~sp~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~ 100 (237)
..+...+.++....+...+.+.+ .. ..+.+++..+...-.+....... .......+++++|.+ +++++++
T Consensus 141 ~iM~~~~~~v~~~~tv~ea~~~~~~~~~~~~~~~~~pVvd~~~~lvGivt~~dl--l~~~~~~~v~~im~~--~~~~v~~ 216 (286)
T 2oux_A 141 AIMTTEFVSIVANQTVRSAMYVLKNQADMAETIYYVYVVDQENHLVGVISLRDL--IVNDDDTLIADILNE--RVISVHV 216 (286)
T ss_dssp HHCBSCCCEECSSSBHHHHHHHHHHHCSSCSCCSEEEEECTTCBEEEEEEHHHH--TTSCTTSBHHHHSBS--CCCCEET
T ss_pred HhCCCCceEECCCCcHHHHHHHHHHcccCccceeEEEEEcCCCeEEEEEEHHHH--HcCCCCCcHHHHcCC--CCeeecC
Confidence 44555565554444444455555 32 34457887633212222222221 112346789999988 7999999
Q ss_pred CCCHHHHHHHHHHCCCCeEEEEcCCCcEEEEEehHhHhhh
Q 026495 101 TTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLAL 140 (237)
Q Consensus 101 ~~~l~~~~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~ 140 (237)
++++.++++.|.+++.+.+||+|++|+++|+||..|+++.
T Consensus 217 ~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIT~~Dil~~ 256 (286)
T 2oux_A 217 GDDQEDVAQTIRDYDFLAVPVTDYDDHLLGIVTVDDIIDV 256 (286)
T ss_dssp TSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHH
T ss_pred CCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHHHH
Confidence 9999999999999999999999988999999999999974
No 106
>2yvy_A MGTE, Mg2+ transporter MGTE; membrane protein, transport protein; 2.30A {Thermus thermophilus} PDB: 2yvz_A
Probab=98.61 E-value=1.1e-07 Score=78.99 Aligned_cols=109 Identities=17% Similarity=0.187 Sum_probs=75.9
Q ss_pred hhhhccCCEEEEecCccchhHHH-hc-----cCCCceEEecCCce--eeeehhhhcccCCCCCcccccccccccCceeEE
Q 026495 27 TSFALQLPCLLLSRPGCRVFSVL-AT-----SSDRVSALRRSSAV--FASGTLTANSAAPSSGVYTVGDFMTTKEELHVV 98 (237)
Q Consensus 27 ~ai~~~v~~li~~~~~~~v~~~~-~~-----~~~~v~v~~~sp~~--~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v 98 (237)
..+...+.++....+...+.+.+ .. ....+++..+...- ....+.+... ....+++++|.+ +++++
T Consensus 139 ~iM~~~~~~v~~~~tv~ea~~~~~~~~~~~~~~~~~~Vvd~~~~lvGivt~~dll~~----~~~~~v~~im~~--~~~~v 212 (278)
T 2yvy_A 139 GLMTPEYVAVREGMTVEEVLRFLRRAAPDAETIYYIYVVDEKGRLKGVLSLRDLIVA----DPRTRVAEIMNP--KVVYV 212 (278)
T ss_dssp GTCBSCCCEECTTSBHHHHHHHHHHHTTTCSCSSEEEEECTTCBEEEEEEHHHHHHS----CTTCBSTTTSBS--SCCCE
T ss_pred hhcCCCceEECCCCcHHHHHHHHHHccCCccceeEEEEECCCCCEEEEEEHHHHhcC----CCCCcHHHHhCC--CCeEE
Confidence 34445555544333344444445 22 34567777643212 3333322221 246689999987 79999
Q ss_pred cCCCCHHHHHHHHHHCCCCeEEEEcCCCcEEEEEehHhHhhhc
Q 026495 99 KPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALD 141 (237)
Q Consensus 99 ~~~~~l~~~~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~ 141 (237)
++++++.++++.|.+++.+.+||+|++|+++|+||..|+++.+
T Consensus 213 ~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGivT~~Dil~~i 255 (278)
T 2yvy_A 213 RTDTDQEEVARLMADYDFTVLPVVDEEGRLVGIVTVDDVLDVL 255 (278)
T ss_dssp ETTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHC
T ss_pred eCCCCHHHHHHHHHhcCCCEEEEEeCCCeEEEEEEHHHHHHHH
Confidence 9999999999999999999999999889999999999999753
No 107
>3ocm_A Putative membrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADP; 1.80A {Bordetella parapertussis}
Probab=98.60 E-value=7.4e-08 Score=74.52 Aligned_cols=105 Identities=14% Similarity=0.121 Sum_probs=72.4
Q ss_pred cCCEEEEecCccchhHHH-hccCCCceEEecC--Cce-eeeehhhhcccCCCCCcccccccccccCceeEEcCCCCHHHH
Q 026495 32 QLPCLLLSRPGCRVFSVL-ATSSDRVSALRRS--SAV-FASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEA 107 (237)
Q Consensus 32 ~v~~li~~~~~~~v~~~~-~~~~~~v~v~~~s--p~~-~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~ 107 (237)
.+.++-...+...+.+.+ ......+|+..+. ... ....+.+..... .....+++ +|. +++++++++++.++
T Consensus 47 ~v~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~lvGivt~~Dl~~~~~-~~~~~~v~-~~~---~~~~v~~~~~l~~a 121 (173)
T 3ocm_A 47 DVSWVNIDDDAATIRQQLTAAPHSFFPVCRGSLDEVVGIGRAKDLVADLI-TEGRVRRN-RLR---DPIIVHESIGILRL 121 (173)
T ss_dssp GCCCEETTSCHHHHHHHHHHSSCSEEEEESSSTTSEEEEEEHHHHHHHHH-HHSSCCGG-GSB---CCCEECGGGCHHHH
T ss_pred HeEEEeCCCCHHHHHHHHHhCCCCEEEEEeCCCCCEEEEEEHHHHHHHHh-cCCcchhH-hcC---CCeEECCCCcHHHH
Confidence 444554444444555555 6667788888743 222 333333332111 11245677 554 58899999999999
Q ss_pred HHHHHHCCCCeEEEEcCCCcEEEEEehHhHhhhc
Q 026495 108 LEILVEKRITGFPVIDDDWKLVGLVSDYDLLALD 141 (237)
Q Consensus 108 ~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~ 141 (237)
+..|.+++.+.+||+|++|+++|+||..||++.+
T Consensus 122 l~~m~~~~~~~~~Vvde~g~lvGiIT~~Dil~~l 155 (173)
T 3ocm_A 122 MDTLKRSRGQLVLVADEFGAIEGLVTPIDVFEAI 155 (173)
T ss_dssp HHHHHHSTTCCEEEECTTCCEEEEECHHHHHHHH
T ss_pred HHHHHHcCCeEEEEEeCCCCEEEEEeHHHHHHHH
Confidence 9999999999999999889999999999999753
No 108
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=98.58 E-value=7.7e-08 Score=71.28 Aligned_cols=98 Identities=15% Similarity=0.226 Sum_probs=66.4
Q ss_pred cchhHHH-hccCCCceEEecCC-ce-eeeehhhhcccCC---CCCcccccccccccC----ceeEEcCCCCHHHHHHHHH
Q 026495 43 CRVFSVL-ATSSDRVSALRRSS-AV-FASGTLTANSAAP---SSGVYTVGDFMTTKE----ELHVVKPTTTVDEALEILV 112 (237)
Q Consensus 43 ~~v~~~~-~~~~~~v~v~~~sp-~~-~~~~~~~~~~~~~---~~~~~~v~~im~~~~----~~~~v~~~~~l~~~~~~~~ 112 (237)
..+.+.+ ......+++..+.. .. ......+...... .....+++++|.+.. ++.++++++++.++++.|.
T Consensus 31 ~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~m~~~~~~~~~~~~v~~~~~l~~~~~~m~ 110 (144)
T 2nyc_A 31 IDVIQMLTQGRVSSVPIIDENGYLINVYEAYDVLGLIKGGIYNDLSLSVGEALMRRSDDFEGVYTCTKNDKLSTIMDNIR 110 (144)
T ss_dssp HHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHHTC----CCSBHHHHHHHCC------CEECTTSBHHHHHHHHH
T ss_pred HHHHHHHHHcCcceeeEEcCCCcEEEEEcHHHHHHHhcccccccCCccHHHHHhcCccccCCCeEECCCCcHHHHHHHHH
Confidence 3344444 45566678776332 22 2222222211111 123668999997521 4789999999999999999
Q ss_pred HCCCCeEEEEcCCCcEEEEEehHhHhhh
Q 026495 113 EKRITGFPVIDDDWKLVGLVSDYDLLAL 140 (237)
Q Consensus 113 ~~~~~~~pVvd~~~~~~Givt~~dl~~~ 140 (237)
+++.+.+||+|++|+++|+||.+|+++.
T Consensus 111 ~~~~~~l~Vvd~~g~~~Giit~~dil~~ 138 (144)
T 2nyc_A 111 KARVHRFFVVDDVGRLVGVLTLSDILKY 138 (144)
T ss_dssp HHTCSEEEEECTTSBEEEEEEHHHHHHH
T ss_pred HCCCCEEEEECCCCCEEEEEEHHHHHHH
Confidence 9999999999988999999999999974
No 109
>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}
Probab=98.57 E-value=1.4e-07 Score=71.10 Aligned_cols=57 Identities=16% Similarity=0.260 Sum_probs=52.1
Q ss_pred CcccccccccccCceeEEcCCCCHHHHHHHHHHCCCCeEEEEcCCCcEEEEEehHhHhhhc
Q 026495 81 GVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALD 141 (237)
Q Consensus 81 ~~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~ 141 (237)
...+++++|.+ +++++++++++.++++.|.+++. +||+|++|+++|+||.+|+++.+
T Consensus 81 ~~~~v~~~m~~--~~~~v~~~~~l~~a~~~m~~~~~--l~Vvd~~g~~~Giit~~dil~~~ 137 (157)
T 2emq_A 81 ETMKVEEVMNR--NIPRLRLDDSLMKAVGLIVNHPF--VCVENDDGYFAGIFTRREVLKQL 137 (157)
T ss_dssp GTCBGGGTCBC--CCCEEETTSBHHHHHHHHHHSSE--EEEECSSSSEEEEEEHHHHHHHH
T ss_pred cCCcHHHHhCC--CCceecCCCcHHHHHHHHhhCCE--EEEEcCCCeEEEEEEHHHHHHHH
Confidence 46789999998 89999999999999999999987 99999889999999999999753
No 110
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=98.55 E-value=1.2e-06 Score=79.05 Aligned_cols=94 Identities=21% Similarity=0.228 Sum_probs=70.6
Q ss_pred chhHHH-hccCCCceEEec--CC-ce-eeeehhhhcccCCCCCcccccccccccCceeEEcCCCCHHHHHHHHHHCCCCe
Q 026495 44 RVFSVL-ATSSDRVSALRR--SS-AV-FASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITG 118 (237)
Q Consensus 44 ~v~~~~-~~~~~~v~v~~~--sp-~~-~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~ 118 (237)
++.+.+ ....+.+|+..+ .. .. ....+.+.. ......+++++|++ +++++++++.++.+++++|.+++.+.
T Consensus 134 ea~~~m~~~~~s~~pVvd~g~~~~lvGiVt~rDl~~---~~~~~~~V~~vM~~-~~~vtv~~~~~l~eal~~m~~~~i~~ 209 (511)
T 3usb_A 134 DAEHLMGKYRISGVPVVNNLDERKLVGIITNRDMRF---IQDYSIKISDVMTK-EQLITAPVGTTLSEAEKILQKYKIEK 209 (511)
T ss_dssp HHHHHHHHHCCSEEEEESCTTTCBEEEEEEHHHHTT---CCCSSSBHHHHCCC-CCCCCEETTCCHHHHHHHHHHHTCSE
T ss_pred HHHHHHHHcCCcEEEEEecCCCCEEEEEEEehHhhh---hccCCCcHHHhccc-CCCEEECCCCCHHHHHHHHHHcCCCE
Confidence 333444 566778888874 21 11 323222222 23456789999995 25889999999999999999999999
Q ss_pred EEEEcCCCcEEEEEehHhHhhhc
Q 026495 119 FPVIDDDWKLVGLVSDYDLLALD 141 (237)
Q Consensus 119 ~pVvd~~~~~~Givt~~dl~~~~ 141 (237)
+||+|++|+++|+||.+|+++..
T Consensus 210 lpVVDe~g~l~GiIT~~Dil~~~ 232 (511)
T 3usb_A 210 LPLVDNNGVLQGLITIKDIEKVI 232 (511)
T ss_dssp EEEECTTSBEEEEEEHHHHHHHH
T ss_pred EEEEeCCCCEeeeccHHHHHHhh
Confidence 99999999999999999999754
No 111
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=98.54 E-value=1.2e-07 Score=71.78 Aligned_cols=106 Identities=14% Similarity=0.140 Sum_probs=74.3
Q ss_pred cCCEEEEecCccchhHHH-hccCCCceEEecCC-ce-eeeehhhhcccCC-C------CCcccccccccccCceeEEcCC
Q 026495 32 QLPCLLLSRPGCRVFSVL-ATSSDRVSALRRSS-AV-FASGTLTANSAAP-S------SGVYTVGDFMTTKEELHVVKPT 101 (237)
Q Consensus 32 ~v~~li~~~~~~~v~~~~-~~~~~~v~v~~~sp-~~-~~~~~~~~~~~~~-~------~~~~~v~~im~~~~~~~~v~~~ 101 (237)
.+.++....+...+.+.+ ......+|+..+.. .. ......+...... . ....+++++|.+ ++.++.++
T Consensus 25 ~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~~~lvGivt~~dl~~~~~~~~~~~~~~~~~~~v~~~m~~--~~~~v~~~ 102 (159)
T 1yav_A 25 KVAHVQVGNNLEHALLVLTKTGYTAIPVLDPSYRLHGLIGTNMIMNSIFGLERIEFEKLDQITVEEVMLT--DIPRLHIN 102 (159)
T ss_dssp GSCCEETTCBHHHHHHHHHHHCCSEEEEECTTCBEEEEEEHHHHHHHHBCSSSBCGGGTTTSBHHHHSBC--SCCEEETT
T ss_pred ceEEECCCCcHHHHHHHHHhCCCcEEEEECCCCCEEEEeEHHHHHHHhhhhcccchhhhccCCHHHhcCC--CCceEcCC
Confidence 455555444445555555 55666788886432 22 3333322221111 1 356789999998 79999999
Q ss_pred CCHHHHHHHHHHCCCCeEEEEcCCCcEEEEEehHhHhhhc
Q 026495 102 TTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALD 141 (237)
Q Consensus 102 ~~l~~~~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~ 141 (237)
+++.++++.|.+++. +||+|++|+++|+||..|+++.+
T Consensus 103 ~~l~~a~~~m~~~~~--lpVvd~~g~~vGiit~~dil~~~ 140 (159)
T 1yav_A 103 DPIMKGFGMVINNGF--VCVENDEQVFEGIFTRRVVLKEL 140 (159)
T ss_dssp SBHHHHHHHTTTCSE--EEEECTTCBEEEEEEHHHHHHHH
T ss_pred CCHHHHHHHHHhCCE--EEEEeCCCeEEEEEEHHHHHHHH
Confidence 999999999998876 99999889999999999999753
No 112
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=98.53 E-value=9.7e-08 Score=72.05 Aligned_cols=56 Identities=25% Similarity=0.385 Sum_probs=51.0
Q ss_pred cccccccccccCceeEEcCCCCHHHHHHHHHHCCCCeEEEEcCCCcEEEEEehHhHhhhc
Q 026495 82 VYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALD 141 (237)
Q Consensus 82 ~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~ 141 (237)
..+++++|.+ ++.++.+++++.+++..|.+++ .+||+|++|+++|+||..|+++.+
T Consensus 85 ~~~v~~~m~~--~~~~v~~~~~l~~a~~~~~~~~--~lpVvd~~g~~~Giit~~dil~~l 140 (156)
T 3ctu_A 85 DTDIVHMTKT--DVAVVSPDFTITEVLHKLVDES--FLPVVDAEGIFQGIITRKSILKAV 140 (156)
T ss_dssp TSBGGGGCBC--SCCCBCSSCCHHHHHHHTTTSS--EEEEECTTSBEEEEEETTHHHHHH
T ss_pred cCcHHHhccC--CceeeCCCCcHHHHHHHHHHcC--eEEEEcCCCeEEEEEEHHHHHHHH
Confidence 6789999988 7899999999999999999876 799999889999999999999753
No 113
>3ghd_A A cystathionine beta-synthase domain protein FUSE ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus}
Probab=98.51 E-value=1.7e-07 Score=61.54 Aligned_cols=41 Identities=15% Similarity=0.138 Sum_probs=38.6
Q ss_pred ceEEcCCCCHHHHHHHHHHcCCcEEEEEcCCCcEEEEEEccc
Q 026495 187 PVVVRETTNLEDAARLLLETKYRRLPVVDADGWNYHKRKCSK 228 (237)
Q Consensus 187 ~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~iGvIt~~d 228 (237)
+.++.+++++.+|+++|.+++++.+||+| +|+++|++|.+|
T Consensus 2 ~vtv~p~~tv~ea~~~M~~~~i~~~~V~d-~~~lvGIvT~~D 42 (70)
T 3ghd_A 2 AIVVQPKDTVDRVAKILSRNKAGSAVVME-GDEILGVVTERD 42 (70)
T ss_dssp EEEECTTCBHHHHHHHHHHTTCSEEEEEE-TTEEEEEEEHHH
T ss_pred CEEECCCCcHHHHHHHHHHcCCCEEEEEE-CCEEEEEEEHHH
Confidence 56899999999999999999999999998 689999999887
No 114
>2pfi_A Chloride channel protein CLC-Ka; cystathionine beta synthetase (CBS) domains containing protein, transport protein; 1.60A {Homo sapiens}
Probab=98.50 E-value=1.7e-07 Score=71.05 Aligned_cols=111 Identities=14% Similarity=0.114 Sum_probs=74.3
Q ss_pred hhhhccCCEEEEecCccchhHHH-hccCCCceEEec--CC-ce-eeeehhhhcccCC------CCCcccccccccccCc-
Q 026495 27 TSFALQLPCLLLSRPGCRVFSVL-ATSSDRVSALRR--SS-AV-FASGTLTANSAAP------SSGVYTVGDFMTTKEE- 94 (237)
Q Consensus 27 ~ai~~~v~~li~~~~~~~v~~~~-~~~~~~v~v~~~--sp-~~-~~~~~~~~~~~~~------~~~~~~v~~im~~~~~- 94 (237)
..+...+.++....+..++.+.+ ......+++..+ .. .. ......+...... .....++.++|.+ .
T Consensus 17 dim~~~~~~v~~~~~~~~a~~~~~~~~~~~~pVvd~~~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~v~~~m~~--~~ 94 (164)
T 2pfi_A 17 HFMNHSITTLAKDTPLEEVVKVVTSTDVTEYPLVESTESQILVGIVQRAQLVQALQAEPPSRAPGHQQCLQDILAR--GC 94 (164)
T ss_dssp HHCBCCCCCEETTCBHHHHHHHHHTCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHC-------CCCCBHHHHHHT--TC
T ss_pred HHcCCCCeEECCCCcHHHHHHHHHhCCCCceeEEecCCCCEEEEEEEHHHHHHHHHhhccccCCcccchhhhhhcc--cc
Confidence 44555555554444344445555 455567788763 21 22 2232222211111 0124578899987 5
Q ss_pred -----eeEEcCCCCHHHHHHHHHHCCCCeEEEEcCCCcEEEEEehHhHhhh
Q 026495 95 -----LHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLAL 140 (237)
Q Consensus 95 -----~~~v~~~~~l~~~~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~ 140 (237)
+.++.+++++.++++.|.+++.+.+||+| +|+++|+||..||++.
T Consensus 95 ~~~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd-~g~l~Giit~~dil~~ 144 (164)
T 2pfi_A 95 PTEPVTLTLFSETTLHQAQNLFKLLNLQSLFVTS-RGRAVGCVSWVEMKKA 144 (164)
T ss_dssp CCBCCCCCEETTCBHHHHHHHHHHTTCSEEEEEE-TTEEEEEEEHHHHHHH
T ss_pred cccCCceEECCCCcHHHHHHHHHHhCCCEEEEEE-CCEEEEEEEHHHHHHH
Confidence 68899999999999999999999999999 7999999999999975
No 115
>2j9l_A Chloride channel protein 5; ION channel, ION transport, voltage-gated; HET: ATP; 2.30A {Homo sapiens} SCOP: d.37.1.1 PDB: 2ja3_A*
Probab=98.43 E-value=3.6e-07 Score=70.66 Aligned_cols=59 Identities=14% Similarity=0.227 Sum_probs=54.0
Q ss_pred CCcccccccccccCceeEEcCCCCHHHHHHHHHHCCCCeEEEEcCCCcEEEEEehHhHhhhc
Q 026495 80 SGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALD 141 (237)
Q Consensus 80 ~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~ 141 (237)
....+++++|.+ ++.++++++++.+++..|.+++.+.+||+| +|+++|+||..||++.+
T Consensus 105 ~~~~~v~~im~~--~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd-~g~~vGiit~~dll~~l 163 (185)
T 2j9l_A 105 PPTLKLRNILDL--SPFTVTDLTPMEIVVDIFRKLGLRQCLVTH-NGRLLGIITKKDVLKHI 163 (185)
T ss_dssp CCCEECGGGEES--SCCEEETTSBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHH
T ss_pred ccCccHHHhhCc--CCeEeCCCCCHHHHHHHHHhCCCcEEEEEE-CCEEEEEEEHHHHHHHH
Confidence 356789999988 799999999999999999999999999999 79999999999999753
No 116
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=98.42 E-value=1.6e-07 Score=84.51 Aligned_cols=61 Identities=31% Similarity=0.362 Sum_probs=0.0
Q ss_pred CcccccccccccCceeEEcCCCCHHHHHHHHHHCCCCeEEEEcCCCcEEEEEehHhHhhhc
Q 026495 81 GVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALD 141 (237)
Q Consensus 81 ~~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~ 141 (237)
...+++++|++.++++++++++++.+++++|.+++.+.+||+|++|+++|+||.+||++..
T Consensus 159 ~~~~V~diM~~~~~~~tv~~~~sl~ea~~~m~~~~i~~lpVVDe~g~lvGiIT~~Dil~~~ 219 (503)
T 1me8_A 159 TETKVSDMMTPFSKLVTAHQDTKLSEANKIIWEKKLNALPIIDDDQHLRYIVFRKDYDRSQ 219 (503)
T ss_dssp -------------------------------------------------------------
T ss_pred ccCcHHHHhCCCCCCEEEcCCCcHHHHHHHHHHcCCCEEEEEcCCCeEEEEEEecHHHHhh
Confidence 4668999999822399999999999999999999999999999999999999999999753
No 117
>2d4z_A Chloride channel protein; CLC chloride channel cytoplasmic domain, CBS domains, ION CH regulatory subunit, transport protein; 3.10A {Torpedo marmorata} SCOP: d.37.1.1
Probab=98.33 E-value=6.8e-07 Score=73.31 Aligned_cols=53 Identities=23% Similarity=0.277 Sum_probs=49.2
Q ss_pred CCccccccccCceEEcCCCCHHHHHHHHHHcCCcEEEEEcCC--CcEEEEEEccc
Q 026495 176 GKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAD--GWNYHKRKCSK 228 (237)
Q Consensus 176 ~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~--~~~iGvIt~~d 228 (237)
...++++|++++.++.+++++.+|.++|.+++++.+||||++ ++++|+|+++|
T Consensus 12 ~~~v~diMt~~vvtv~~~~tv~~~~~lm~~~~~~~~PVVd~~~~~~LvGiIt~~d 66 (250)
T 2d4z_A 12 NIQVGDIMVRDVTSIASTSTYGDLLHVLRQTKLKFFPFVDTPDTNTLLGSIDRTE 66 (250)
T ss_dssp SCBTTSSSBSSCCCEETTCBHHHHHHHHHHCCCSEEEEESCTTTCBEEEEEEHHH
T ss_pred CCChHHhcCCCCeEECCCCCHHHHHHHHHhcCCCEEEEEecCCCCeEEEEEEHHH
Confidence 568999999999999999999999999999999999999963 68999999987
No 118
>3fio_A A cystathionine beta-synthase domain protein fused to A Zn-ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus} PDB: 3ghd_A
Probab=98.32 E-value=9e-07 Score=57.37 Aligned_cols=41 Identities=15% Similarity=0.141 Sum_probs=38.3
Q ss_pred ceEEcCCCCHHHHHHHHHHcCCcEEEEEcCCCcEEEEEEccc
Q 026495 187 PVVVRETTNLEDAARLLLETKYRRLPVVDADGWNYHKRKCSK 228 (237)
Q Consensus 187 ~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~iGvIt~~d 228 (237)
+.++++++++.+|++.|.+++++.+||+|+ |+++|+||.+|
T Consensus 2 ~~~v~~~~~~~~a~~~m~~~~~~~~pV~d~-~~l~Givt~~d 42 (70)
T 3fio_A 2 AIVVQPKDTVDRVAKILSRNKAGSAVVMEG-DEILGVVTERD 42 (70)
T ss_dssp EEEECTTCBHHHHHHHHHHTTCSEEEEEET-TEEEEEEEHHH
T ss_pred CeEECCCCcHHHHHHHHHHcCCCEEEEEEC-CEEEEEEEHHH
Confidence 568999999999999999999999999996 99999999876
No 119
>2zy9_A Mg2+ transporter MGTE; membrane protien, metal transport; 2.94A {Thermus thermophilus} PDB: 2yvx_A
Probab=98.31 E-value=6.7e-07 Score=79.95 Aligned_cols=82 Identities=20% Similarity=0.274 Sum_probs=64.4
Q ss_pred CCCceEEecCCce--eeeehhhhcccCCCCCcccccccccccCceeEEcCCCCHHHHHHHHHHCCCCeEEEEcCCCcEEE
Q 026495 53 SDRVSALRRSSAV--FASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVG 130 (237)
Q Consensus 53 ~~~v~v~~~sp~~--~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~pVvd~~~~~~G 130 (237)
.+.+++..+...- ....+.+..+ ..+.+++++|.+ ++.++++++++.++++.|.+++.+.+||+|++|+++|
T Consensus 191 ~~~ipVvd~~~~lvGiVt~~Dll~~----~~~~~v~dim~~--~~~~v~~~~~l~ea~~~m~~~~~~~lpVVDe~g~lvG 264 (473)
T 2zy9_A 191 IYYIYVVDEKGRLKGVLSLRDLIVA----DPRTRVAEIMNP--KVVYVRTDTDQEEVARLMADYDFTVLPVVDEEGRLVG 264 (473)
T ss_dssp EEEEEEECTTSBEEEEEEHHHHHHS----CTTSBGGGTSBS--SCCCEESSSBHHHHHHHHHHHTCSEEEEECTTSBEEE
T ss_pred eeEEEEECCCCcEEEEEEHHHHhcC----CCCCcHHHHhCC--CCeEEeCCCcHHHHHHHHHhcCCcEEEEEcCCCEEEE
Confidence 4567777643211 3333333221 246689999987 7999999999999999999999999999999999999
Q ss_pred EEehHhHhhh
Q 026495 131 LVSDYDLLAL 140 (237)
Q Consensus 131 ivt~~dl~~~ 140 (237)
+||.+|+++.
T Consensus 265 iIT~~Dil~~ 274 (473)
T 2zy9_A 265 IVTVDDVLDV 274 (473)
T ss_dssp EEEHHHHHHH
T ss_pred EEehHhhHHH
Confidence 9999999975
No 120
>3org_A CMCLC; transporter, transport protein; 3.50A {Cyanidioschyzon merolae}
Probab=98.12 E-value=2.2e-06 Score=79.19 Aligned_cols=54 Identities=20% Similarity=0.050 Sum_probs=49.3
Q ss_pred cccccccccCceeEEcCCCCHHHHHHHHHHCCCCeEEEEcCCCcEEEEEehHhHhhh
Q 026495 84 TVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLAL 140 (237)
Q Consensus 84 ~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~ 140 (237)
+++++|++ ++.++++++++.++.+.|.+++.+++||+ ++|+++|+||.+|+++.
T Consensus 569 ~v~~iMt~--~pitV~~~~~l~ea~~~M~~~~i~~lpVv-e~G~lvGIVT~~Dll~~ 622 (632)
T 3org_A 569 SLVVPCDV--SPIVVTSYSLVRQLHFLFVMLMPSMIYVT-ERGKLVGIVEREDVAYG 622 (632)
T ss_dssp --CCSCCC--CCCEEETTCBHHHHHHHHHHTCCSEEEEE-ETTEEEEEEEGGGTEEC
T ss_pred ccchhhcC--CCceecCCCcHHHHHHHHHhcCCCEEEEE-ECCEEEEEEehhhHHHH
Confidence 38899998 89999999999999999999999999999 57999999999999974
No 121
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=98.10 E-value=8.6e-07 Score=79.64 Aligned_cols=93 Identities=19% Similarity=0.270 Sum_probs=58.4
Q ss_pred hHHH-hccCCCceEEecCCce--eeeehhhhcccCCCCCcccccccccccCceeEEcCCCCHHHHHHHHHHCCCCeEEEE
Q 026495 46 FSVL-ATSSDRVSALRRSSAV--FASGTLTANSAAPSSGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVI 122 (237)
Q Consensus 46 ~~~~-~~~~~~v~v~~~sp~~--~~~~~~~~~~~~~~~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~pVv 122 (237)
.+.+ ....+.+|+..+...- ....+.+.. ......+++++|++++++++++++.++.+++++|.+++.+.+||+
T Consensus 112 ~~~m~~~~~s~~PVvd~~~~lvGiVt~rDL~~---~~~~~~~v~diM~p~~~~vtv~~~~~l~ea~~~m~~~~i~~lpVV 188 (496)
T 4fxs_A 112 MELTHYHGFAGFPVVTENNELVGIITGRDVRF---VTDLTKSVAAVMTPKERLATVKEGATGAEVQEKMHKARVEKILVV 188 (496)
T ss_dssp HHHHTSSCCCEEEEECSSSBEEEEEEHHHHTT---CCCTTSBGGGTSEEGGGCCEEECC----CGGGTCC---CCCEEEE
T ss_pred HHHHHHcCCcEEEEEccCCEEEEEEEHHHHhh---cccCCCcHHHHhcCCCCCEEECCCCCHHHHHHHHHHcCCCEEEEE
Confidence 3344 4556678888743221 333333321 234567899999943248899999999999999999999999999
Q ss_pred cCCCcEEEEEehHhHhhhc
Q 026495 123 DDDWKLVGLVSDYDLLALD 141 (237)
Q Consensus 123 d~~~~~~Givt~~dl~~~~ 141 (237)
|++|+++|+||.+|+++..
T Consensus 189 De~G~l~GiIT~~DIl~~~ 207 (496)
T 4fxs_A 189 NDEFQLKGMITAKDFHKAE 207 (496)
T ss_dssp CTTSBCCEEECCC-----C
T ss_pred cCCCCEEEeehHhHHHHhh
Confidence 9999999999999999754
No 122
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=98.08 E-value=2.8e-06 Score=76.19 Aligned_cols=62 Identities=31% Similarity=0.388 Sum_probs=0.0
Q ss_pred CCcccccccccccCceeEEcCCCCHHHHHHHHHHCCCCeEEEEcCCCcEEEEEehHhHhhhc
Q 026495 80 SGVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALD 141 (237)
Q Consensus 80 ~~~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~ 141 (237)
....+++++|++++++++++++.++.+++++|.+++.+.+||+|++|+++|+||.+|+++..
T Consensus 144 ~~~~~V~~vMtp~~~~vtv~~~~~l~ea~~~m~~~~i~~lpVVDe~g~lvGiIT~~Dil~~~ 205 (490)
T 4avf_A 144 NAGDTVAAIMTPKDKLVTAREGTPLEEMKAKLYENRIEKMLVVDENFYLRGLVTFRDIEKAK 205 (490)
T ss_dssp --------------------------------------------------------------
T ss_pred ccCCcHHHHhccCCCCEEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEehHHhhhhc
Confidence 34668999999432488999999999999999999999999999999999999999999754
No 123
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=98.08 E-value=7.2e-06 Score=74.21 Aligned_cols=113 Identities=8% Similarity=0.081 Sum_probs=79.0
Q ss_pred hhhhhccCCEEEEe-cCccchhHHH-hccCCCceEEe--cCCce-eeeehhhhccc--CCCCCcccccccccccCceeEE
Q 026495 26 RTSFALQLPCLLLS-RPGCRVFSVL-ATSSDRVSALR--RSSAV-FASGTLTANSA--APSSGVYTVGDFMTTKEELHVV 98 (237)
Q Consensus 26 ~~ai~~~v~~li~~-~~~~~v~~~~-~~~~~~v~v~~--~sp~~-~~~~~~~~~~~--~~~~~~~~v~~im~~~~~~~~v 98 (237)
...+...+.++.-. .+..++.+.+ ......+||.. +.... ....+.+.... .......+|+++|.+ +++++
T Consensus 387 ~diM~~~~vtv~~~~~tv~ea~~~m~~~~~~~lpVvd~~~g~lvGiVt~~Dll~~l~~~~~~~~~~V~~im~~--~~~~v 464 (527)
T 3pc3_A 387 AELELPAPPVILKSDATVGEAIALMKKHRVDQLPVVDQDDGSVLGVVGQETLITQIVSMNRQQSDPAIKALNK--RVIRL 464 (527)
T ss_dssp GGGCCCCCSCCEETTCBHHHHHHHHHHHTCSEEEEECTTTCCEEEEEEHHHHHHHHHHHCCCTTSBGGGGEET--TCCEE
T ss_pred HHhCcCCCeEEcCCCCcHHHHHHHHHHcCCCeEEEEECCCCEEEEEEEHHHHHHHHHhccCcCCCcHHHHhcC--CCeEE
Confidence 34455566555555 5455566666 66677889987 22223 43443332111 123456789999998 89999
Q ss_pred cCCCCHHHHHHHHHHCCCCeEEEEcCC----CcEEEEEehHhHhhhcc
Q 026495 99 KPTTTVDEALEILVEKRITGFPVIDDD----WKLVGLVSDYDLLALDS 142 (237)
Q Consensus 99 ~~~~~l~~~~~~~~~~~~~~~pVvd~~----~~~~Givt~~dl~~~~~ 142 (237)
++++++.+++++|.+++ .+||+|++ |+++|+||..||++++.
T Consensus 465 ~~~~~l~~a~~~m~~~~--~~pVVd~~~~~~g~lvGIVT~~Dll~~l~ 510 (527)
T 3pc3_A 465 NESEILGKLARVLEVDP--SVLILGKNPAGKVELKALATKLDVTTFIA 510 (527)
T ss_dssp ETTSBHHHHHHHHTTCS--EEEEEEECSSSCEEEEEEEEHHHHHHHHH
T ss_pred CCCCcHHHHHHHHhhCC--EEEEEeCCcccCCeEEEEEEHHHHHHHHH
Confidence 99999999999997665 47999974 89999999999998643
No 124
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=97.97 E-value=6.9e-06 Score=73.60 Aligned_cols=58 Identities=41% Similarity=0.591 Sum_probs=0.0
Q ss_pred CcccccccccccCceeEEcCCCCHHHHHHHHHHCCCCeEEEEcCCCcEEEEEehHhHhhh
Q 026495 81 GVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLAL 140 (237)
Q Consensus 81 ~~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~ 140 (237)
...+++++|.+ ++.++++++++.++++.|.+++.+.+||+|++|+++|+||.+||++.
T Consensus 148 ~~~~v~~im~~--~~~~v~~~~~l~eal~~m~~~~~~~lpVVde~g~lvGiiT~~Dil~~ 205 (486)
T 2cu0_A 148 EGKLVKELMTK--EVITVPESIEVEEALKIMIENRIDRLPVVDERGKLVGLITMSDLVAR 205 (486)
T ss_dssp ------------------------------------------------------------
T ss_pred CCCCHHHHccC--CCeEECCcCcHHHHHHHHHHcCCCEEEEEecCCeEEEEEEHHHHHHh
Confidence 35678999997 78899999999999999999999999999999999999999999975
No 125
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=97.91 E-value=9.3e-06 Score=72.88 Aligned_cols=62 Identities=34% Similarity=0.541 Sum_probs=4.2
Q ss_pred CcccccccccccCceeEEcCCCCHHHHHHHHHHCCCCeEEEEcCCCcEEEEEehHhHhhhcc
Q 026495 81 GVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS 142 (237)
Q Consensus 81 ~~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~ 142 (237)
...+++++|++.++++++++++++.+++++|.+++.+.+||+|++|+++|+||..|+++...
T Consensus 153 ~~~~v~~im~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIt~~Dll~~~~ 214 (494)
T 1vrd_A 153 LSKKIKDLMTPREKLIVAPPDISLEKAKEILHQHRIEKLPLVSKDNKLVGLITIKDIMSVIE 214 (494)
T ss_dssp --------------------------------------------------------CHHHHT
T ss_pred CCCcHHHHhCCCCCCeEECCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHHhhhc
Confidence 35689999985335889999999999999999999999999999999999999999998643
No 126
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=97.85 E-value=4.3e-05 Score=68.46 Aligned_cols=61 Identities=26% Similarity=0.365 Sum_probs=54.6
Q ss_pred CcccccccccccCceeEEcCCCCHHHHHHHHHHCCCCeEEEEcCCCcEEEEEehHhHhhhcc
Q 026495 81 GVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS 142 (237)
Q Consensus 81 ~~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~ 142 (237)
...+++++|++. +++++++++++.++++.|.+++.+.+||+|++|+++|++|.+|+++...
T Consensus 150 ~~~~v~~im~~~-~~~~v~~~~~l~~a~~~m~~~~~~~lpVVd~~g~lvGivt~~Dil~~~~ 210 (491)
T 1zfj_A 150 YNAPISEHMTSE-HLVTAAVGTDLETAERILHEHRIEKLPLVDNSGRLSGLITIKDIEKVIE 210 (491)
T ss_dssp SSSBTTTSCCCS-CCCCEETTCCHHHHHHHHHHTTCSEEEEECTTSBEEEEEEHHHHHHHHH
T ss_pred CCCcHHHHcCCC-CCEEECCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEEHHHHHHHHh
Confidence 466899999841 3788999999999999999999999999999999999999999998654
No 127
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=97.65 E-value=6.6e-06 Score=73.45 Aligned_cols=58 Identities=29% Similarity=0.385 Sum_probs=0.0
Q ss_pred CcccccccccccCceeEEcCCCCHHHHHHHHHHCCCCeEEEEcCCCcEEEEEehHhHhhh
Q 026495 81 GVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLAL 140 (237)
Q Consensus 81 ~~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~ 140 (237)
...+|+++|++ ++++++.+.++++|.++|.++++..+||||++|+++|+||.+|+.+.
T Consensus 198 ~~~~V~evMT~--~lvt~~~~~~leeA~~iL~~~kieklpVVd~~g~LvGlIT~kDi~k~ 255 (556)
T 4af0_A 198 AETPIKSVMTT--EVVTGSSPITLEKANSLLRETKKGKLPIVDSNGHLVSLVARSDLLKN 255 (556)
T ss_dssp ------------------------------------------------------------
T ss_pred cceEhhhhccc--ceEEecCCCCHHHHHHHHHHccccceeEEccCCcEEEEEEechhhhh
Confidence 45689999998 89999999999999999999999999999999999999999999874
No 128
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=97.49 E-value=3.4e-05 Score=69.59 Aligned_cols=62 Identities=27% Similarity=0.342 Sum_probs=42.9
Q ss_pred CcccccccccccCceeEEcCCCCHHHHHHHHHHCCCCeEEEEcCCCcEEEEEehHhHhhhcc
Q 026495 81 GVYTVGDFMTTKEELHVVKPTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLLALDS 142 (237)
Q Consensus 81 ~~~~v~~im~~~~~~~~v~~~~~l~~~~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~ 142 (237)
...+++++|.+..+++++++++++.+++++|.+++.+.+||+|++|+++|+||.+|+++...
T Consensus 171 ~~~~v~~vm~~~~~~~tv~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIt~~Dll~~~~ 232 (514)
T 1jcn_A 171 HTTLLSEVMTPRIELVVAPAGVTLKEANEILQRSKKGKLPIVNDCDELVAIIARTDLKKNRD 232 (514)
T ss_dssp ----------CCBCCCCEETTCCSTTTTTHHHHHTCSCCCEESSSSCCC----CCCCSSCCC
T ss_pred CCCCHHHHhCCCCCCeEECCCCCHHHHHHHHHHcCCCcccEECCCCeEEEEEEHHHHHHHhh
Confidence 45678899986335889999999999999999999999999999999999999999997543
No 129
>3ka5_A Ribosome-associated protein Y (PSRP-1); structural genomics, PSI-2, protein structure initiative; 1.80A {Clostridium acetobutylicum}
Probab=62.52 E-value=20 Score=22.34 Aligned_cols=39 Identities=10% Similarity=-0.040 Sum_probs=29.4
Q ss_pred CCCCHHHHHHHHHHcCCcEEEEEcCCCcEEEEEEcc-cCC
Q 026495 192 ETTNLEDAARLLLETKYRRLPVVDADGWNYHKRKCS-KGG 230 (237)
Q Consensus 192 ~~~~l~~a~~~m~~~~~~~lpVvd~~~~~iGvIt~~-d~~ 230 (237)
.-+++++|+..|...+.+.+.-.|.+..-+-+|-++ ||+
T Consensus 11 kpMsveEAv~qmel~gh~F~vF~n~etg~~nVVYRR~dG~ 50 (65)
T 3ka5_A 11 KPMSEEEAVLEMELLGHNFFVFQNGDSNEVNVVYKRKDGN 50 (65)
T ss_dssp SCBCHHHHHHHHHHHTCSEEEEEETTTTEEEEEEECTTSC
T ss_pred CCCCHHHHHHHHHhCCCcEEEEEeCCCCCEEEEEEeCCCC
Confidence 456899999999999999888888764455555554 554
No 130
>3k2t_A LMO2511 protein; listeria monocytogenes,binding, structural genomics, PSI-2, protein structure initiative; 2.40A {Listeria monocytogenes}
Probab=62.27 E-value=17 Score=22.01 Aligned_cols=39 Identities=13% Similarity=-0.036 Sum_probs=29.4
Q ss_pred CCCCHHHHHHHHHHcCCcEEEEEcCC-CcEEEEEEcccCC
Q 026495 192 ETTNLEDAARLLLETKYRRLPVVDAD-GWNYHKRKCSKGG 230 (237)
Q Consensus 192 ~~~~l~~a~~~m~~~~~~~lpVvd~~-~~~iGvIt~~d~~ 230 (237)
.-+++++|+..|...+.+.+.-.|.+ |++-=+-.+.||+
T Consensus 11 kpmsveEAv~qmel~gh~F~vF~n~~t~~~nVvYrR~dG~ 50 (57)
T 3k2t_A 11 KPMDSEEAVLQMNLLGHSFYVYTDAETNGTNIVYSRKDGK 50 (57)
T ss_dssp CCBCHHHHHHHHHHHTCSEEEEEBSSSCCEEEEEECTTSC
T ss_pred CCCCHHHHHHHHHhCCCcEEEEEcCCCCCEEEEEEeCCCC
Confidence 45789999999999999988888866 5544444455665
No 131
>2ioj_A Hypothetical protein AF_1212; NYSGXRC, PFAM:DRTGG, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Archaeoglobus fulgidus} SCOP: c.98.2.2
Probab=52.88 E-value=2.7 Score=30.25 Aligned_cols=46 Identities=11% Similarity=0.200 Sum_probs=32.4
Q ss_pred hhhhh-ccCCEEEEecCccchhHHH--hccCCCceEEecCCce-eeeehhhh
Q 026495 26 RTSFA-LQLPCLLLSRPGCRVFSVL--ATSSDRVSALRRSSAV-FASGTLTA 73 (237)
Q Consensus 26 ~~ai~-~~v~~li~~~~~~~v~~~~--~~~~~~v~v~~~sp~~-~~~~~~~~ 73 (237)
..|++ .++||+++++ +..+.+.+ .+...++|++. ++.+ +.....+.
T Consensus 67 l~a~~~~~~~~iIlt~-g~~~~~~i~~~A~~~~ipvl~-t~~~T~~~~~~l~ 116 (139)
T 2ioj_A 67 LTALEMPNVRCLILTG-NLEPVQLVLTKAEERGVPVIL-TGHDTLTAVSRLE 116 (139)
T ss_dssp HHHTTCTTEEEEEEET-TCCCCHHHHHHHHHHTCCEEE-CSSCHHHHHHHHH
T ss_pred HHHHhCCCCcEEEEcC-CCCCCHHHHHHHHHCCCeEEE-ECCCHHHHHHHHH
Confidence 35566 7899999998 66676666 55567889988 7777 55544443
No 132
>3lyv_A Ribosome-associated factor Y; ribosomal protein S30AE family, structural genomics, PSI-2, structure initiative; 2.70A {Streptococcus pyogenes}
Probab=52.74 E-value=22 Score=22.21 Aligned_cols=39 Identities=13% Similarity=0.080 Sum_probs=28.8
Q ss_pred CCCCHHHHHHHHHHcCCcEEEEEcCC-CcEEEEEEcccCC
Q 026495 192 ETTNLEDAARLLLETKYRRLPVVDAD-GWNYHKRKCSKGG 230 (237)
Q Consensus 192 ~~~~l~~a~~~m~~~~~~~lpVvd~~-~~~iGvIt~~d~~ 230 (237)
.-+++++|+..|...+.+.+.-.|.+ |++-=+-.+.||+
T Consensus 12 kpMsveEAv~qMel~gh~F~vF~n~etg~~nVVYRR~dG~ 51 (66)
T 3lyv_A 12 KPMDVEEARLQMELLGHDFFIYTDSEDGATNILYRREDGN 51 (66)
T ss_dssp CEECHHHHHHHHHTTTCSEEEEEETTTCSEEEEEECTTSS
T ss_pred CCCCHHHHHHHHHcCCCcEEEEEeCCCCCEEEEEEECCCC
Confidence 34689999999999999988888865 5544444455554
No 133
>1tif_A IF3-N, translation initiation factor 3; IF3 N-terminal domain, ribosome binding factor; 1.80A {Geobacillus stearothermophilus} SCOP: d.15.8.1
Probab=52.41 E-value=20 Score=23.22 Aligned_cols=26 Identities=23% Similarity=0.378 Sum_probs=22.1
Q ss_pred CCCeEEEEcCCCcEEEEEehHhHhhh
Q 026495 115 RITGFPVIDDDWKLVGLVSDYDLLAL 140 (237)
Q Consensus 115 ~~~~~pVvd~~~~~~Givt~~dl~~~ 140 (237)
+.+.+-+++++|..+|+++..+-++.
T Consensus 12 r~~eVrli~~~Ge~lGv~~~~eAl~~ 37 (78)
T 1tif_A 12 RAREVRLIDQNGDQLGIKSKQEALEI 37 (78)
T ss_dssp CCSEEEEECTTSCEEEEEEHHHHHHH
T ss_pred CCCEEEEECCCCcCCCcccHHHHHHH
Confidence 35667899999999999999998864
No 134
>3fan_A Non-structural protein; chymotrypsin-like, N-terminal beta-barrels, C-terminal alpha-beta extra domain; 1.90A {Porcine respiratory and reproductivesyndrome virus} PDB: 3fao_A
Probab=46.32 E-value=12 Score=29.16 Aligned_cols=25 Identities=16% Similarity=0.025 Sum_probs=17.4
Q ss_pred CCcEEEEEcCCCcEEEEEEcccCCC
Q 026495 207 KYRRLPVVDADGWNYHKRKCSKGGS 231 (237)
Q Consensus 207 ~~~~lpVvd~~~~~iGvIt~~d~~~ 231 (237)
+-+--||+|.+|+++||-+.+|+.=
T Consensus 125 GdSGsPVvn~dG~VIGVHt~s~~~g 149 (213)
T 3fan_A 125 GDSGSPVITEAGELVGVHTGSNKQG 149 (213)
T ss_dssp CSTTCEEEETTSCEEEEEEC-----
T ss_pred CCCCCccCCCCCcEEEEEeccCCcc
Confidence 4455799999999999999998764
No 135
>1svj_A Potassium-transporting ATPase B chain; alpha-beta sandwich, hydrolase; NMR {Escherichia coli} SCOP: d.220.1.1 PDB: 1u7q_A 2a00_A* 2a29_A*
Probab=43.86 E-value=33 Score=25.17 Aligned_cols=33 Identities=9% Similarity=-0.029 Sum_probs=26.8
Q ss_pred HHHHHHHHHHcCCcEEEEEcCCCcEEEEEEcccC
Q 026495 196 LEDAARLLLETKYRRLPVVDADGWNYHKRKCSKG 229 (237)
Q Consensus 196 l~~a~~~m~~~~~~~lpVvd~~~~~iGvIt~~d~ 229 (237)
+.+..+.+.+.+...+.|-. +++++|+|...|-
T Consensus 121 ~~~~~~~la~~G~T~v~VA~-d~~l~GvIalaD~ 153 (156)
T 1svj_A 121 VDQKVDQVARQGATPLVVVE-GSRVLGVIALKDI 153 (156)
T ss_dssp HHHHHHHHHHTTCEEEEEEE-TTEEEEEEEEEEC
T ss_pred HHHHHHHHHhCCCCEEEEEE-CCEEEEEEEEecC
Confidence 77778888888887676665 7999999998873
No 136
>1p0z_A Sensor kinase CITA; transferase; HET: FLC MO7; 1.60A {Klebsiella pneumoniae} SCOP: d.110.6.1 PDB: 2v9a_A 2j80_A*
Probab=35.89 E-value=27 Score=24.33 Aligned_cols=21 Identities=29% Similarity=0.322 Sum_probs=16.3
Q ss_pred eEEEEcCCCcEEEEEehHhHh
Q 026495 118 GFPVIDDDWKLVGLVSDYDLL 138 (237)
Q Consensus 118 ~~pVvd~~~~~~Givt~~dl~ 138 (237)
..||.+++|+++|+|...-.+
T Consensus 105 ~~PV~~~~g~viGvv~vg~~l 125 (131)
T 1p0z_A 105 KSPIQDATGKVIGIVSVGYTI 125 (131)
T ss_dssp EEEEECTTCCEEEEEEEEEEG
T ss_pred EEeEECCCCCEEEEEEEEEEh
Confidence 368998789999999875443
No 137
>2w5e_A Putative serine protease; coiled coil, transmembrane, thiol protease, RNA replication, ribosomal frameshifting, catalytic triad, membrane; 2.00A {Human astrovirus 1}
Probab=35.67 E-value=24 Score=26.11 Aligned_cols=25 Identities=16% Similarity=0.154 Sum_probs=19.7
Q ss_pred HcCCcEEEEEcCCCcEEEEEEcccC
Q 026495 205 ETKYRRLPVVDADGWNYHKRKCSKG 229 (237)
Q Consensus 205 ~~~~~~lpVvd~~~~~iGvIt~~d~ 229 (237)
..+..--|++|.+|+++|+.+...|
T Consensus 123 ~pGnSGGPl~n~~G~VVGI~~~~~g 147 (163)
T 2w5e_A 123 QDGMSGAPVCDKYCRVLAVHQTNTG 147 (163)
T ss_dssp SSCCTTCEEECTTSCEEEEEEEEET
T ss_pred CCCCchhhEEcCCCEEEEEEccCcc
Confidence 4455667999999999999987654
No 138
>1svj_A Potassium-transporting ATPase B chain; alpha-beta sandwich, hydrolase; NMR {Escherichia coli} SCOP: d.220.1.1 PDB: 1u7q_A 2a00_A* 2a29_A*
Probab=35.47 E-value=29 Score=25.49 Aligned_cols=34 Identities=18% Similarity=0.425 Sum_probs=27.4
Q ss_pred HHHHHHHHHHCCCCeEEEEcCCCcEEEEEehHhHh
Q 026495 104 VDEALEILVEKRITGFPVIDDDWKLVGLVSDYDLL 138 (237)
Q Consensus 104 l~~~~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~ 138 (237)
+.+....+.+.+.+-+.|.. +|+++|+|...|-+
T Consensus 121 ~~~~~~~la~~G~T~v~VA~-d~~l~GvIalaD~i 154 (156)
T 1svj_A 121 VDQKVDQVARQGATPLVVVE-GSRVLGVIALKDIV 154 (156)
T ss_dssp HHHHHHHHHHTTCEEEEEEE-TTEEEEEEEEEECC
T ss_pred HHHHHHHHHhCCCCEEEEEE-CCEEEEEEEEecCC
Confidence 66777778888887777776 58999999998865
No 139
>3by8_A Sensor protein DCUS; histidine kinase sensor domain, inner membrane, membrane, phosphoprotein, transferase, transmembrane; 1.45A {Escherichia coli} SCOP: d.110.6.1 PDB: 1ojg_A
Probab=34.83 E-value=28 Score=24.73 Aligned_cols=21 Identities=29% Similarity=0.294 Sum_probs=16.7
Q ss_pred eEEEEcCCCcEEEEEehHhHh
Q 026495 118 GFPVIDDDWKLVGLVSDYDLL 138 (237)
Q Consensus 118 ~~pVvd~~~~~~Givt~~dl~ 138 (237)
..||.+++|+++|+|+..-.+
T Consensus 110 ~~PV~~~~g~viGvv~vg~~~ 130 (142)
T 3by8_A 110 FTPIYDENHKQIGVVAIGLEL 130 (142)
T ss_dssp EEEEECTTSCEEEEEEEEEEH
T ss_pred EEeEEcCCCCEEEEEEEeEEH
Confidence 468988779999999876544
No 140
>3ka5_A Ribosome-associated protein Y (PSRP-1); structural genomics, PSI-2, protein structure initiative; 1.80A {Clostridium acetobutylicum}
Probab=33.90 E-value=69 Score=19.83 Aligned_cols=36 Identities=17% Similarity=0.026 Sum_probs=27.7
Q ss_pred CCCCHHHHHHHHHHCCCCeEEEEcCCCcEEEEEehH
Q 026495 100 PTTTVDEALEILVEKRITGFPVIDDDWKLVGLVSDY 135 (237)
Q Consensus 100 ~~~~l~~~~~~~~~~~~~~~pVvd~~~~~~Givt~~ 135 (237)
+-.+++||+..|...+...+...|.+..-+.+|.++
T Consensus 11 kpMsveEAv~qmel~gh~F~vF~n~etg~~nVVYRR 46 (65)
T 3ka5_A 11 KPMSEEEAVLEMELLGHNFFVFQNGDSNEVNVVYKR 46 (65)
T ss_dssp SCBCHHHHHHHHHHHTCSEEEEEETTTTEEEEEEEC
T ss_pred CCCCHHHHHHHHHhCCCcEEEEEeCCCCCEEEEEEe
Confidence 456899999999999998888888664445666654
No 141
>3k6y_A Serine protease, possible membrane-associated serine protease; oxidative stress, disulfide, BENT helix, HY protease; 1.30A {Mycobacterium tuberculosis} PDB: 3k6z_A 3lt3_A
Probab=29.09 E-value=40 Score=26.13 Aligned_cols=24 Identities=13% Similarity=-0.049 Sum_probs=18.6
Q ss_pred CCcEEEEEcCCCcEEEEEEcccCC
Q 026495 207 KYRRLPVVDADGWNYHKRKCSKGG 230 (237)
Q Consensus 207 ~~~~lpVvd~~~~~iGvIt~~d~~ 230 (237)
+..--|+++.+|+++|+++...++
T Consensus 181 GdSGGPLv~~~G~vvGI~s~~~~~ 204 (237)
T 3k6y_A 181 GDSGGPLIDLNGQVLGVVFGAAID 204 (237)
T ss_dssp TCTTCEEECTTSCEEEEEEEECSS
T ss_pred CccHHHEECCCCEEEEEEEeeccC
Confidence 445568998789999999886543
No 142
>2as9_A Serine protease; trypsin-like fold, hydrolase; 1.70A {Staphylococcus aureus}
Probab=27.40 E-value=46 Score=25.22 Aligned_cols=24 Identities=13% Similarity=0.007 Sum_probs=18.3
Q ss_pred CCcEEEEEcCCCcEEEEEEcccCC
Q 026495 207 KYRRLPVVDADGWNYHKRKCSKGG 230 (237)
Q Consensus 207 ~~~~lpVvd~~~~~iGvIt~~d~~ 230 (237)
|-.--|+++.+|+++|+++..-+.
T Consensus 156 GdSGGPlv~~~g~lvGI~s~g~~~ 179 (210)
T 2as9_A 156 GNSGSPVLNSNNEVIGVVYGGIGK 179 (210)
T ss_dssp TCTTCEEECTTSCEEEEECCSCCC
T ss_pred CCccCcEECCCCeEEEEEeccccc
Confidence 444568998779999999986553
No 143
>2qkp_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 1.75A {Streptococcus mutans}
Probab=26.55 E-value=38 Score=24.31 Aligned_cols=21 Identities=19% Similarity=0.137 Sum_probs=15.3
Q ss_pred eEEEEcCCCcEEEEEe-hHhHh
Q 026495 118 GFPVIDDDWKLVGLVS-DYDLL 138 (237)
Q Consensus 118 ~~pVvd~~~~~~Givt-~~dl~ 138 (237)
..||.|++|+++|+|. ..|+.
T Consensus 110 ~~Pi~d~~G~~~G~vev~~Dit 131 (151)
T 2qkp_A 110 YAAVRDQAGDFQGVLEYVQDIK 131 (151)
T ss_dssp EEEEECTTCCEEEEEEEEEECG
T ss_pred EEEEECCCCCEEEEEEEEEECH
Confidence 5788888899999884 44443
No 144
>2w7s_A Serine protease SPLA; hydrolase, family S1; 1.80A {Staphylococcus aureus} PDB: 2w7u_A
Probab=25.82 E-value=41 Score=25.09 Aligned_cols=24 Identities=13% Similarity=0.004 Sum_probs=17.4
Q ss_pred CCcEEEEEcCCCcEEEEEEcccCC
Q 026495 207 KYRRLPVVDADGWNYHKRKCSKGG 230 (237)
Q Consensus 207 ~~~~lpVvd~~~~~iGvIt~~d~~ 230 (237)
+-.--|+++.+|+++|+++...++
T Consensus 152 GdSGGPl~~~~g~lvGI~s~g~~~ 175 (200)
T 2w7s_A 152 GNSGSPVLNSKHELIGILYAGSGK 175 (200)
T ss_dssp TCTTCEEECTTSCEEEEEEEEC--
T ss_pred CCccCeEECcCCEEEEEEeccccC
Confidence 444568888779999999987553
No 145
>3dns_A Ribosomal-protein-alanine acetyltransferase; N-terminal domain of ribosomal-protein-alanine acetyltransfe MCSG, PSI; 2.10A {Clostridium acetobutylicum}
Probab=25.73 E-value=37 Score=24.39 Aligned_cols=28 Identities=14% Similarity=0.129 Sum_probs=23.3
Q ss_pred EEEEEcCCCcEEEEEEcccCCCCCCCCC
Q 026495 210 RLPVVDADGWNYHKRKCSKGGSSNKTCD 237 (237)
Q Consensus 210 ~lpVvd~~~~~iGvIt~~d~~~~~~~~~ 237 (237)
...+-++++.++|.+...+=...|++|.
T Consensus 21 ~fiI~~~~~~~IG~i~i~~Id~~nr~a~ 48 (135)
T 3dns_A 21 EYLITDKYGITIGRIFIVDLNKDNRFCM 48 (135)
T ss_dssp EEEEEETTCCEEEEEEEEEEETTTTEEE
T ss_pred EEEEECCCCCEEEEEEEEEeccccCEEE
Confidence 3456667899999999999999999884
No 146
>3tjo_A Serine protease HTRA1; peptidase, hydrolase; HET: BOG; 2.30A {Homo sapiens} PDB: 3tjn_A 3nwu_A
Probab=22.84 E-value=47 Score=25.76 Aligned_cols=21 Identities=19% Similarity=0.292 Sum_probs=17.7
Q ss_pred CCCeEEEEcCCCcEEEEEehH
Q 026495 115 RITGFPVIDDDWKLVGLVSDY 135 (237)
Q Consensus 115 ~~~~~pVvd~~~~~~Givt~~ 135 (237)
+.+.=|++|.+|+++||++..
T Consensus 187 G~SGGPLv~~~G~vVGI~s~~ 207 (231)
T 3tjo_A 187 GNAGGPLVNLDGEVIGINTLK 207 (231)
T ss_dssp TTTTSEEECTTSCEEEEEEEE
T ss_pred CCchhHeecCCCeEEEEEeEE
Confidence 667779999889999999863
No 147
>3tjo_A Serine protease HTRA1; peptidase, hydrolase; HET: BOG; 2.30A {Homo sapiens} PDB: 3tjn_A 3nwu_A
Probab=22.81 E-value=50 Score=25.63 Aligned_cols=21 Identities=19% Similarity=0.080 Sum_probs=16.7
Q ss_pred CCcEEEEEcCCCcEEEEEEcc
Q 026495 207 KYRRLPVVDADGWNYHKRKCS 227 (237)
Q Consensus 207 ~~~~lpVvd~~~~~iGvIt~~ 227 (237)
+..--|++|.+|+++||++..
T Consensus 187 G~SGGPLv~~~G~vVGI~s~~ 207 (231)
T 3tjo_A 187 GNAGGPLVNLDGEVIGINTLK 207 (231)
T ss_dssp TTTTSEEECTTSCEEEEEEEE
T ss_pred CCchhHeecCCCeEEEEEeEE
Confidence 444568998889999999875
No 148
>3fan_A Non-structural protein; chymotrypsin-like, N-terminal beta-barrels, C-terminal alpha-beta extra domain; 1.90A {Porcine respiratory and reproductivesyndrome virus} PDB: 3fao_A
Probab=22.13 E-value=49 Score=25.69 Aligned_cols=27 Identities=26% Similarity=0.308 Sum_probs=20.0
Q ss_pred HCCCCeEEEEcCCCcEEEEEehHhHhh
Q 026495 113 EKRITGFPVIDDDWKLVGLVSDYDLLA 139 (237)
Q Consensus 113 ~~~~~~~pVvd~~~~~~Givt~~dl~~ 139 (237)
+.+-+.-||+|.+|+++|+-+..+=..
T Consensus 123 ~pGdSGsPVvn~dG~VIGVHt~s~~~g 149 (213)
T 3fan_A 123 ACGDSGSPVITEAGELVGVHTGSNKQG 149 (213)
T ss_dssp CCCSTTCEEEETTSCEEEEEEC-----
T ss_pred CCCCCCCccCCCCCcEEEEEeccCCcc
Confidence 467888899999999999999988764
No 149
>1agj_A Epidermolytic toxin A; hydrolase, serine protease; 1.70A {Staphylococcus aureus} SCOP: b.47.1.1 PDB: 1dua_A 1exf_A 1due_A
Probab=21.54 E-value=48 Score=25.64 Aligned_cols=23 Identities=4% Similarity=-0.075 Sum_probs=18.1
Q ss_pred cEEEEEcCCCcEEEEEEcccCCC
Q 026495 209 RRLPVVDADGWNYHKRKCSKGGS 231 (237)
Q Consensus 209 ~~lpVvd~~~~~iGvIt~~d~~~ 231 (237)
.--|+++.+|+++||++...|+-
T Consensus 195 SGGPl~~~~g~lvGI~s~g~~c~ 217 (242)
T 1agj_A 195 SGSGIFNSNGELVGIHSSKVSHL 217 (242)
T ss_dssp TTCEEECTTSEEEEEEEEEEECS
T ss_pred CchHhcccCCEEEEEEecccccc
Confidence 34688887799999999876653
No 150
>3lgi_A Protease DEGS; stress-sensor, HTRA, PDZ OMP, hydrolase, serine PR; 1.65A {Escherichia coli} PDB: 2qf3_A 2qf0_A 2rce_A* 3lh3_A* 3b8j_A 2qgr_A 3lh1_A 3lgy_A 3lgu_A 3lgv_A 3lgw_A 3lgt_A 2r3u_A
Probab=21.12 E-value=51 Score=25.60 Aligned_cols=22 Identities=14% Similarity=0.184 Sum_probs=18.3
Q ss_pred HCCCCeEEEEcCCCcEEEEEeh
Q 026495 113 EKRITGFPVIDDDWKLVGLVSD 134 (237)
Q Consensus 113 ~~~~~~~pVvd~~~~~~Givt~ 134 (237)
..+.+.=|++|.+|+++|+++.
T Consensus 172 ~~G~SGGPlv~~~G~vvGI~s~ 193 (237)
T 3lgi_A 172 NHGNSGGALVNSLGELMGINTL 193 (237)
T ss_dssp CTTCTTCEEECTTCCEEEEECC
T ss_pred CCCCchHHeeCCCCeEEEEEee
Confidence 3466778999988999999986
Done!