BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026496
(237 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9M4T8|PSA5_SOYBN Proteasome subunit alpha type-5 OS=Glycine max GN=PAE1 PE=2 SV=1
Length = 237
Score = 481 bits (1237), Expect = e-135, Method: Compositional matrix adjust.
Identities = 232/237 (97%), Positives = 235/237 (99%)
Query: 1 MFLTRTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLE 60
MFLTRTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLE
Sbjct: 1 MFLTRTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLE 60
Query: 61 PSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLA 120
PSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLA
Sbjct: 61 PSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLA 120
Query: 121 LRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQ 180
LRFGEGDEESMSRPFGVSLLIAG DENGPSLYYTDPSGTFWQCN KAIGSGSEGADSSLQ
Sbjct: 121 LRFGEGDEESMSRPFGVSLLIAGHDENGPSLYYTDPSGTFWQCNGKAIGSGSEGADSSLQ 180
Query: 181 EQYNKDLTLQEAETIALSILKQVMEEKVTPNNVDIARVAPTYHLYTPSEVEAVINRL 237
EQ+NKDLTLQEAETIALSILKQVMEEKVTPNNVDIA+VAPTYHLYTPSEVEAVI+RL
Sbjct: 181 EQFNKDLTLQEAETIALSILKQVMEEKVTPNNVDIAKVAPTYHLYTPSEVEAVISRL 237
>sp|Q9LSU1|PSA5_ORYSJ Proteasome subunit alpha type-5 OS=Oryza sativa subsp. japonica
GN=PAE1 PE=2 SV=1
Length = 237
Score = 474 bits (1220), Expect = e-133, Method: Compositional matrix adjust.
Identities = 227/237 (95%), Positives = 234/237 (98%)
Query: 1 MFLTRTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLE 60
MFLTRTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTK+GVVLAVEKR+TSPLLE
Sbjct: 1 MFLTRTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKDGVVLAVEKRVTSPLLE 60
Query: 61 PSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLA 120
PSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQA+CDLA
Sbjct: 61 PSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQAICDLA 120
Query: 121 LRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQ 180
LRFGEGDEESMSRPFGVSLLIAG DENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQ
Sbjct: 121 LRFGEGDEESMSRPFGVSLLIAGHDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQ 180
Query: 181 EQYNKDLTLQEAETIALSILKQVMEEKVTPNNVDIARVAPTYHLYTPSEVEAVINRL 237
EQYNK+LTLQEAETIALSILKQVMEEKVTPNNVDIA+V+P YHLYTP+EVEAVI RL
Sbjct: 181 EQYNKELTLQEAETIALSILKQVMEEKVTPNNVDIAKVSPNYHLYTPAEVEAVIARL 237
>sp|Q42134|PSA5B_ARATH Proteasome subunit alpha type-5-B OS=Arabidopsis thaliana GN=PAE2
PE=1 SV=2
Length = 237
Score = 473 bits (1217), Expect = e-133, Method: Compositional matrix adjust.
Identities = 226/237 (95%), Positives = 234/237 (98%)
Query: 1 MFLTRTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLE 60
MFLTRTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIG+KTKEGVVLAVEKRITSPLLE
Sbjct: 1 MFLTRTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGVKTKEGVVLAVEKRITSPLLE 60
Query: 61 PSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLA 120
PSSVEKIMEID+HIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLA
Sbjct: 61 PSSVEKIMEIDDHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLA 120
Query: 121 LRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQ 180
LRFGEG+EESMSRPFGVSLLIAG DENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQ
Sbjct: 121 LRFGEGEEESMSRPFGVSLLIAGHDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQ 180
Query: 181 EQYNKDLTLQEAETIALSILKQVMEEKVTPNNVDIARVAPTYHLYTPSEVEAVINRL 237
EQ+NKD+TLQEAETIA+SILKQVMEEKVTPNNVDIA+VAP YHLYTP EVEAVI+RL
Sbjct: 181 EQFNKDITLQEAETIAVSILKQVMEEKVTPNNVDIAKVAPAYHLYTPQEVEAVISRL 237
>sp|O81149|PSA5A_ARATH Proteasome subunit alpha type-5-A OS=Arabidopsis thaliana GN=PAE1
PE=1 SV=1
Length = 237
Score = 472 bits (1214), Expect = e-132, Method: Compositional matrix adjust.
Identities = 226/237 (95%), Positives = 233/237 (98%)
Query: 1 MFLTRTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLE 60
MFLTRTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIG+KTKEGVVLAVEKRITSPLLE
Sbjct: 1 MFLTRTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGVKTKEGVVLAVEKRITSPLLE 60
Query: 61 PSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLA 120
PSSVEKIMEID+HIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLA
Sbjct: 61 PSSVEKIMEIDDHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLA 120
Query: 121 LRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQ 180
LRFGEG+EESMSRPFGVSLLIAG DENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQ
Sbjct: 121 LRFGEGEEESMSRPFGVSLLIAGHDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQ 180
Query: 181 EQYNKDLTLQEAETIALSILKQVMEEKVTPNNVDIARVAPTYHLYTPSEVEAVINRL 237
EQ+NKDL+LQEAETIA+SILKQVMEEKVTPNNVDIA+VAP YHLYTP EVEAVI RL
Sbjct: 181 EQFNKDLSLQEAETIAVSILKQVMEEKVTPNNVDIAKVAPAYHLYTPQEVEAVIARL 237
>sp|Q9Z2U1|PSA5_MOUSE Proteasome subunit alpha type-5 OS=Mus musculus GN=Psma5 PE=1 SV=1
Length = 241
Score = 343 bits (881), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 167/241 (69%), Positives = 200/241 (82%), Gaps = 4/241 (1%)
Query: 1 MFLTRTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLE 60
MFLTR+EYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIG++T EGV LAVEKRITSPL+E
Sbjct: 1 MFLTRSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITSPLME 60
Query: 61 PSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLA 120
PSS+EKI+EID HIGCAMSGLIADA+TL++ ARVETQNH F+Y E MTVES TQA+ +LA
Sbjct: 61 PSSIEKIVEIDAHIGCAMSGLIADAKTLIDKARVETQNHWFTYNETMTVESVTQAVSNLA 120
Query: 121 LRFGEGDEE--SMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSS 178
L+FGE D + +MSRPFGV+LL G DE GP L++ DPSGTF QC+A+AIGS SEGA SS
Sbjct: 121 LQFGEEDADPGAMSRPFGVALLFGGVDEKGPQLFHMDPSGTFVQCDARAIGSASEGAQSS 180
Query: 179 LQEQYNKDLTLQEAETIALSILKQVMEEKVTPNNVDIARVAP--TYHLYTPSEVEAVINR 236
LQE Y+K +TL+EA +L ILKQVMEEK+ N+++A V P +H++T E+E VI
Sbjct: 181 LQEVYHKSMTLKEAIKSSLIILKQVMEEKLNATNIELATVQPGQNFHMFTKEELEEVIKD 240
Query: 237 L 237
+
Sbjct: 241 I 241
>sp|P28066|PSA5_HUMAN Proteasome subunit alpha type-5 OS=Homo sapiens GN=PSMA5 PE=1 SV=3
Length = 241
Score = 343 bits (881), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 167/241 (69%), Positives = 200/241 (82%), Gaps = 4/241 (1%)
Query: 1 MFLTRTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLE 60
MFLTR+EYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIG++T EGV LAVEKRITSPL+E
Sbjct: 1 MFLTRSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITSPLME 60
Query: 61 PSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLA 120
PSS+EKI+EID HIGCAMSGLIADA+TL++ ARVETQNH F+Y E MTVES TQA+ +LA
Sbjct: 61 PSSIEKIVEIDAHIGCAMSGLIADAKTLIDKARVETQNHWFTYNETMTVESVTQAVSNLA 120
Query: 121 LRFGEGDEE--SMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSS 178
L+FGE D + +MSRPFGV+LL G DE GP L++ DPSGTF QC+A+AIGS SEGA SS
Sbjct: 121 LQFGEEDADPGAMSRPFGVALLFGGVDEKGPQLFHMDPSGTFVQCDARAIGSASEGAQSS 180
Query: 179 LQEQYNKDLTLQEAETIALSILKQVMEEKVTPNNVDIARVAP--TYHLYTPSEVEAVINR 236
LQE Y+K +TL+EA +L ILKQVMEEK+ N+++A V P +H++T E+E VI
Sbjct: 181 LQEVYHKSMTLKEAIKSSLIILKQVMEEKLNATNIELATVQPGQNFHMFTKEELEEVIKD 240
Query: 237 L 237
+
Sbjct: 241 I 241
>sp|Q5E987|PSA5_BOVIN Proteasome subunit alpha type-5 OS=Bos taurus GN=PSMA5 PE=1 SV=1
Length = 241
Score = 343 bits (881), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 167/241 (69%), Positives = 200/241 (82%), Gaps = 4/241 (1%)
Query: 1 MFLTRTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLE 60
MFLTR+EYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIG++T EGV LAVEKRITSPL+E
Sbjct: 1 MFLTRSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITSPLME 60
Query: 61 PSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLA 120
PSS+EKI+EID HIGCAMSGLIADA+TL++ ARVETQNH F+Y E MTVES TQA+ +LA
Sbjct: 61 PSSIEKIVEIDAHIGCAMSGLIADAKTLIDKARVETQNHWFTYNETMTVESVTQAVSNLA 120
Query: 121 LRFGEGDEE--SMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSS 178
L+FGE D + +MSRPFGV+LL G DE GP L++ DPSGTF QC+A+AIGS SEGA SS
Sbjct: 121 LQFGEEDADPGAMSRPFGVALLFGGVDEKGPQLFHMDPSGTFVQCDARAIGSASEGAQSS 180
Query: 179 LQEQYNKDLTLQEAETIALSILKQVMEEKVTPNNVDIARVAP--TYHLYTPSEVEAVINR 236
LQE Y+K +TL+EA +L ILKQVMEEK+ N+++A V P +H++T E+E VI
Sbjct: 181 LQEVYHKSMTLKEAIKSSLIILKQVMEEKLNATNIELATVQPGQNFHMFTKEELEEVIKD 240
Query: 237 L 237
+
Sbjct: 241 I 241
>sp|P34064|PSA5_RAT Proteasome subunit alpha type-5 OS=Rattus norvegicus GN=Psma5 PE=2
SV=1
Length = 241
Score = 337 bits (864), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 165/241 (68%), Positives = 197/241 (81%), Gaps = 4/241 (1%)
Query: 1 MFLTRTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLE 60
MFLTR+EYDRGVNTFSPEGRLFQVEYAIE KLGSTAIG++T EGV LAVEKRITSPL+E
Sbjct: 1 MFLTRSEYDRGVNTFSPEGRLFQVEYAIEGHKLGSTAIGIQTSEGVCLAVEKRITSPLME 60
Query: 61 PSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLA 120
PSS+EKI+EID HIGCAMSGLIADA+TL++ ARVETQNH F+Y E MTVES TQA+ +LA
Sbjct: 61 PSSIEKIVEIDAHIGCAMSGLIADAKTLIDKARVETQNHWFTYNETMTVESVTQAVSNLA 120
Query: 121 LRFGEGDEE--SMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSS 178
L+FGE D + +MSRPFGV+LL G DE GP L++ DPSGTF QC+A+AIGS SEGA SS
Sbjct: 121 LQFGEEDADPGAMSRPFGVALLFGGVDEKGPQLFHMDPSGTFVQCDARAIGSASEGAQSS 180
Query: 179 LQEQYNKDLTLQEAETIALSILKQVMEEKVTPNNVDIARVAP--TYHLYTPSEVEAVINR 236
LQE Y+K TL+EA +L ILKQVMEEK+ N+++A V P +H++T E+E VI
Sbjct: 181 LQEVYHKSTTLKEAIKSSLIILKQVMEEKLNATNIELATVQPGQNFHMFTKEELEEVIKD 240
Query: 237 L 237
+
Sbjct: 241 I 241
>sp|Q9UT97|PSA5_SCHPO Probable proteasome subunit alpha type-5 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=pup2 PE=1 SV=1
Length = 247
Score = 337 bits (863), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 159/241 (65%), Positives = 199/241 (82%), Gaps = 5/241 (2%)
Query: 1 MFLTRTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLE 60
MF+TR+EYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIG+KTK+ VVL VEKR+TSPL+E
Sbjct: 1 MFMTRSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGVKTKDAVVLGVEKRLTSPLME 60
Query: 61 PSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLA 120
SVEK+ EID HIGCA+SGL ADART++EHARV+TQNHRF+Y EP +ESTTQ++CDLA
Sbjct: 61 SHSVEKLFEIDSHIGCAISGLTADARTIIEHARVQTQNHRFTYDEPQGIESTTQSICDLA 120
Query: 121 LRFGE---GDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADS 177
LRFGE G+E MSRPFGV+LLIAG DE+GP LY+++PSGT+++ AKAIGSGSE A S
Sbjct: 121 LRFGEGEDGEERIMSRPFGVALLIAGIDEHGPQLYHSEPSGTYFRYEAKAIGSGSEPAKS 180
Query: 178 SLQEQYNKDLTLQEAETIALSILKQVMEEKVTPNNVDIARVAPT--YHLYTPSEVEAVIN 235
L ++++KD+TL+EAE + L +L+QVMEEK+ NV +A+V +H+Y E+ +
Sbjct: 181 ELVKEFHKDMTLEEAEVLILKVLRQVMEEKLDSKNVQLAKVTAEGGFHIYNDEEMADAVA 240
Query: 236 R 236
R
Sbjct: 241 R 241
>sp|Q55G04|PSA5_DICDI Proteasome subunit alpha type-5 OS=Dictyostelium discoideum
GN=psmA5 PE=3 SV=1
Length = 241
Score = 333 bits (855), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 160/243 (65%), Positives = 199/243 (81%), Gaps = 9/243 (3%)
Query: 1 MFLTRTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLE 60
MFLTR+EYDRGVNTFSPEGRLFQVEYA+EAIKLG IG++ +EGVVLAVEKR+TSPLLE
Sbjct: 1 MFLTRSEYDRGVNTFSPEGRLFQVEYALEAIKLG---IGVQCEEGVVLAVEKRLTSPLLE 57
Query: 61 PSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLA 120
PSS++K++EID H+ CA+SGL+ADART+++HAR+ETQNHRF+Y EPM VES Q++CDLA
Sbjct: 58 PSSIQKVVEIDYHLICALSGLVADARTIIDHARIETQNHRFNYNEPMGVESCVQSICDLA 117
Query: 121 LRFGEG---DEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADS 177
LRFGE EE MSRPFGV+LLIAG DE GPSLYY+DPSGTF Q +AKAIG+GSEGA +
Sbjct: 118 LRFGENRNSGEERMSRPFGVALLIAGIDEKGPSLYYSDPSGTFTQFHAKAIGAGSEGAQT 177
Query: 178 SLQEQYNKDLTLQEAETIALSILKQVMEEKVTPNNVDIARVAPT---YHLYTPSEVEAVI 234
+LQE+Y+K LT+ E + +AL+ LKQVMEE +T NV++A + + +Y E+ VI
Sbjct: 178 TLQEKYSKTLTIAECQKLALTTLKQVMEEAITTTNVELAVITKADQKFKIYNKEELATVI 237
Query: 235 NRL 237
L
Sbjct: 238 QTL 240
>sp|Q94561|PSA5_ENTHI Proteasome subunit alpha type-5 OS=Entamoeba histolytica PE=3 SV=2
Length = 247
Score = 303 bits (776), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 146/220 (66%), Positives = 177/220 (80%), Gaps = 2/220 (0%)
Query: 1 MFLTRTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLE 60
MF+T+ E D GVNTFS EGRLFQVEYA EA+KLGST IG++TKEGVVLAVEKRI+SPL+
Sbjct: 1 MFMTKNENDHGVNTFSSEGRLFQVEYATEAMKLGSTVIGIQTKEGVVLAVEKRISSPLML 60
Query: 61 PSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLA 120
SS+EKI+EID+HIG A+SGL ADARTL+++AR+E QNHRF Y EP+ VE QA+ DL+
Sbjct: 61 GSSIEKIIEIDDHIGAAVSGLTADARTLIDNARLEAQNHRFMYDEPINVEVVAQAISDLS 120
Query: 121 LRFGEGDEES--MSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSS 178
LRFGEG + MSRPFGV+LLIAG DE GP L+ TDPSG F + AKA G+G+E A S
Sbjct: 121 LRFGEGSRKKKVMSRPFGVALLIAGVDETGPRLFQTDPSGMFIEFYAKATGAGTEAAQSI 180
Query: 179 LQEQYNKDLTLQEAETIALSILKQVMEEKVTPNNVDIARV 218
L E+YNK +TL+EAE +ALS LKQVMEEK+ NV++A V
Sbjct: 181 LHEKYNKSMTLREAEILALSTLKQVMEEKLNSKNVEVALV 220
>sp|Q95083|PSA5_DROME Proteasome subunit alpha type-5 OS=Drosophila melanogaster
GN=Prosalpha5 PE=2 SV=2
Length = 244
Score = 300 bits (769), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 152/243 (62%), Positives = 189/243 (77%), Gaps = 6/243 (2%)
Query: 1 MFLTRTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLE 60
MFLTR+EYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIG+ T EGVVLAVEKRITSPL+
Sbjct: 1 MFLTRSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGICTPEGVVLAVEKRITSPLMV 60
Query: 61 PSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLA 120
PS+VEKI+E+D+HIGCA SGL+ADARTL+E ARVE QNH F Y E M++ES QA+ LA
Sbjct: 61 PSTVEKIVEVDKHIGCATSGLMADARTLIERARVECQNHWFVYNERMSIESCAQAVSTLA 120
Query: 121 LRFGE-GDEE---SMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGAD 176
++FG+ GD + +MSRPFGV++L AG + P L++ DPSGTF + AKAIGSGSEGA
Sbjct: 121 IQFGDSGDSDGAAAMSRPFGVAILFAGIEAGQPQLWHMDPSGTFVRHGAKAIGSGSEGAQ 180
Query: 177 SSLQEQYNKDLTLQEAETIALSILKQVMEEKVTPNNVDIARVAP--TYHLYTPSEVEAVI 234
+LQ+ + DLTL EA I+L+ LKQVMEEK+ NV++ + ++++T EVE I
Sbjct: 181 QNLQDLFRPDLTLDEAIDISLNTLKQVMEEKLNSTNVEVMTMTKEREFYMFTKEEVEQHI 240
Query: 235 NRL 237
+
Sbjct: 241 KNI 243
>sp|P32379|PSA5_YEAST Proteasome subunit alpha type-5 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=PUP2 PE=1 SV=2
Length = 260
Score = 300 bits (767), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 149/243 (61%), Positives = 185/243 (76%), Gaps = 6/243 (2%)
Query: 1 MFLTRTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLE 60
MFLTR+EYDRGV+TFSPEGRLFQVEY++EAIKLGSTAIG+ TKEGVVL VEKR TSPLLE
Sbjct: 1 MFLTRSEYDRGVSTFSPEGRLFQVEYSLEAIKLGSTAIGIATKEGVVLGVEKRATSPLLE 60
Query: 61 PSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLA 120
S+EKI+EID HIGCAMSGL ADAR+++EHAR H Y E + VES TQ++CDLA
Sbjct: 61 SDSIEKIVEIDRHIGCAMSGLTADARSMIEHARTAAVTHNLYYDEDINVESLTQSVCDLA 120
Query: 121 LRFGE---GDEESMSRPFGVSLLIAGSD-ENGPSLYYTDPSGTFWQCNAKAIGSGSEGAD 176
LRFGE G+E MSRPFGV+LLIAG D ++G L++ +PSGTF++ NAKAIGSGSEGA
Sbjct: 121 LRFGEGASGEERLMSRPFGVALLIAGHDADDGYQLFHAEPSGTFYRYNAKAIGSGSEGAQ 180
Query: 177 SSLQEQYNKDLTLQEAETIALSILKQVMEEKVTPNNVDIARVAPT--YHLYTPSEVEAVI 234
+ L +++ LTL+EAE + L ILKQVMEEK+ NN ++ + + +Y + +I
Sbjct: 181 AELLNEWHSSLTLKEAELLVLKILKQVMEEKLDENNAQLSCITKQDGFKIYDNEKTAELI 240
Query: 235 NRL 237
L
Sbjct: 241 KEL 243
>sp|Q9XZG5|PSA5_TRYBB Proteasome subunit alpha type-5 OS=Trypanosoma brucei brucei PE=3
SV=1
Length = 246
Score = 298 bits (764), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 139/241 (57%), Positives = 192/241 (79%), Gaps = 5/241 (2%)
Query: 1 MFLTRTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLE 60
MF ++TEYDRGVNTFSPEGR+FQ+EYAIEAIKLGST++G++T + V++A EKR+ S L++
Sbjct: 1 MFSSKTEYDRGVNTFSPEGRIFQIEYAIEAIKLGSTSLGIQTPDAVIIAAEKRVPSTLVD 60
Query: 61 PSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLA 120
PSSV KI+EID HIG +SG++ADAR LV+HARVE QNHRF+Y EPM+VES A CDL+
Sbjct: 61 PSSVNKILEIDHHIGTVLSGMVADARILVDHARVEAQNHRFTYDEPMSVESCALATCDLS 120
Query: 121 LRFGE--GDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSS 178
++FGE G ++ MSRPFGVSLLIAG DENGP L+ TDPSGT+ + +A+AIG G+E A +
Sbjct: 121 VQFGESGGRKKLMSRPFGVSLLIAGVDENGPQLWQTDPSGTYTRYDAQAIGGGAEAAQTV 180
Query: 179 LQEQYNKDLTLQEAETIALSILKQVMEEKVTPNNVDIARVAPT---YHLYTPSEVEAVIN 235
E+Y++++T++EAE + + IL+QVMEEK+T +V+IA V + +Y +++ +I+
Sbjct: 181 FSERYHRNMTVEEAENLTVQILRQVMEEKLTKTSVEIAIVPVSTGRLQIYDQEQIQRIID 240
Query: 236 R 236
R
Sbjct: 241 R 241
>sp|Q95008|PSA5_CAEEL Proteasome subunit alpha type-5 OS=Caenorhabditis elegans GN=pas-5
PE=1 SV=1
Length = 248
Score = 283 bits (724), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 132/222 (59%), Positives = 175/222 (78%), Gaps = 1/222 (0%)
Query: 1 MFLTRTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLE 60
MFLTR+EYDRGVNTFSPEGRLFQVEYAIEA+KLGST+IG+KT EGV+LA EKR TS L+
Sbjct: 1 MFLTRSEYDRGVNTFSPEGRLFQVEYAIEAVKLGSTSIGIKTSEGVLLAAEKRSTSKLMV 60
Query: 61 PSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLA 120
++EKI ++D+HIG +GLIAD+RTLVE A++E QN F+Y + VE TQ++ +LA
Sbjct: 61 NDAIEKISKVDQHIGVTFAGLIADSRTLVERAQIEAQNFWFTYNRKIRVEDVTQSVANLA 120
Query: 121 LRFGEGD-EESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSL 179
L+FG+ D + SMSRPFGV++L AG D+ G L++ DPSGTF C AK+IG+ S+GA+ +L
Sbjct: 121 LQFGDDDVKASMSRPFGVAMLFAGVDQEGAKLFHLDPSGTFIDCKAKSIGAASDGAEQNL 180
Query: 180 QEQYNKDLTLQEAETIALSILKQVMEEKVTPNNVDIARVAPT 221
+EQY+ LT++E +AL+ILKQVMEEK+ NV++ + PT
Sbjct: 181 KEQYHDALTIKEGLKMALAILKQVMEEKLNSANVEVVVIKPT 222
>sp|Q8TYB7|PSA_METKA Proteasome subunit alpha OS=Methanopyrus kandleri (strain AV19 /
DSM 6324 / JCM 9639 / NBRC 100938) GN=psmA PE=3 SV=1
Length = 246
Score = 223 bits (569), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 108/214 (50%), Positives = 149/214 (69%), Gaps = 3/214 (1%)
Query: 5 RTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSV 64
+T YDR + FSP+GRLFQVEYA EA+K G+TA+G+K +EGVVL V+KR+TS L+EP S+
Sbjct: 7 QTAYDRAITVFSPDGRLFQVEYAREAVKRGTTALGIKVEEGVVLGVDKRVTSKLIEPESI 66
Query: 65 EKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFG 124
EK+ +ID HIG A +GL+ADAR LVE AR+E Q +R++YGEP+ V+ +A+CDL +
Sbjct: 67 EKVYQIDTHIGAATAGLVADARVLVERARIEAQTYRYTYGEPIDVDVLVKAICDLKQVY- 125
Query: 125 EGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYN 184
+ RPFG +LLIAG D G L+ TDPSG + A AIG G + A +E+Y
Sbjct: 126 --TQHGGVRPFGTALLIAGVDTKGCRLFETDPSGALTEHKATAIGEGRQEALDVFEEEYR 183
Query: 185 KDLTLQEAETIALSILKQVMEEKVTPNNVDIARV 218
+D+TLQEA +A+ L + E+ T +N++IA V
Sbjct: 184 EDMTLQEAIELAVRALYEASREETTADNLEIAVV 217
>sp|A5UJS2|PSA_METS3 Proteasome subunit alpha OS=Methanobrevibacter smithii (strain PS /
ATCC 35061 / DSM 861) GN=psmA PE=3 SV=1
Length = 250
Score = 212 bits (540), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 109/231 (47%), Positives = 148/231 (64%), Gaps = 3/231 (1%)
Query: 3 LTRTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPS 62
L YDR + FSP+GRLFQVEYA EA+K G+T+IG+K EG+VLAV+KR TS L+E +
Sbjct: 4 LQNAGYDRAITVFSPDGRLFQVEYAREAVKRGTTSIGIKCSEGIVLAVDKRTTSNLVEAT 63
Query: 63 SVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALR 122
S+EKI +IDEHIG A SGL+ADAR LVE ARVE Q ++ +Y EP+ V+S ++ LCD+
Sbjct: 64 SIEKIFKIDEHIGAATSGLVADARALVERARVEAQINKITYSEPIRVDSLSKKLCDMLQM 123
Query: 123 FGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQ 182
+ + RPFG +L+I G + L+ TDPSG + A AIGSG A ++Q
Sbjct: 124 Y---TQNGGVRPFGSALIIGGVYDGICKLFETDPSGALIEYKATAIGSGRSAAMDIFEDQ 180
Query: 183 YNKDLTLQEAETIALSILKQVMEEKVTPNNVDIARVAPTYHLYTPSEVEAV 233
Y D+ L EA +AL+ + + E + T NNV+IA + +YT E V
Sbjct: 181 YKDDMNLNEAINLALTAINEATEHETTANNVEIAVIKCGEEVYTKLSQEEV 231
>sp|A6URN9|PSA_METVS Proteasome subunit alpha OS=Methanococcus vannielii (strain SB /
ATCC 35089 / DSM 1224) GN=psmA PE=3 SV=1
Length = 259
Score = 211 bits (538), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 107/233 (45%), Positives = 157/233 (67%), Gaps = 7/233 (3%)
Query: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKI 67
YDR + FSPEGRL+QVEYA EA++ G+TA+G+K K+GVVLAV++RITS L++ SS+EKI
Sbjct: 10 YDRAITIFSPEGRLYQVEYAREAVRRGTTAVGIKCKDGVVLAVDRRITSKLIDVSSIEKI 69
Query: 68 MEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGD 127
+ID+HI A SGL+ADAR L++ ARVE Q +R SYGE +TVE+ + +CD+ +
Sbjct: 70 FQIDDHIVAATSGLVADARVLIDRARVEAQVNRISYGEAITVEALAKKICDIKQAY---T 126
Query: 128 EESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNKDL 187
+RPFG++LLI G D + L+ TDPSG + A AIGSG A L+E+Y++++
Sbjct: 127 HHGGARPFGLALLITGIDRHSARLFETDPSGALIEYKATAIGSGRPVAMEILEEKYDENM 186
Query: 188 TLQEAETIALSILKQVMEEKVTPNNVDIARVAPTYHLY---TPSEVEAVINRL 237
++ E +A+ L + EE + P N+D+A V T L T E+E ++ ++
Sbjct: 187 SVSEGMELAIYALSKTTEE-LKPENIDMAIVKDTGKLVEKITVFEIEKIVKKV 238
>sp|A4FZT6|PSA_METM5 Proteasome subunit alpha OS=Methanococcus maripaludis (strain C5 /
ATCC BAA-1333) GN=psmA PE=3 SV=1
Length = 259
Score = 210 bits (534), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 106/231 (45%), Positives = 155/231 (67%), Gaps = 7/231 (3%)
Query: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKI 67
YDR + FSPEGRL+QVEYA EA++ G+TA+G+K K+GVVLAV++RITS L++ SS+EKI
Sbjct: 10 YDRAITIFSPEGRLYQVEYAREAVRRGTTAVGIKCKDGVVLAVDRRITSKLIDVSSIEKI 69
Query: 68 MEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGD 127
+ID+HI A SGL+ADAR L++ AR+E Q +R SYGE +TVE+ + +CD+ +
Sbjct: 70 FQIDDHIVAATSGLVADARVLIDRARLEAQMNRISYGEAITVEALAKKICDIKQAY---T 126
Query: 128 EESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNKDL 187
+ +RPFG++LLI G D + L+ TDPSG + A AIGSG A L+ +Y++D+
Sbjct: 127 QHGGARPFGLALLITGIDRHSARLFETDPSGALIEYKATAIGSGRPIAMEVLESKYSEDM 186
Query: 188 TLQEAETIALSILKQVMEEKVTPNNVDIARVAPTYHLY---TPSEVEAVIN 235
T+ E +AL L + EE + P N+D+A V + L + E+E ++
Sbjct: 187 TVNEGMELALYALSKTTEE-LKPENIDMAIVKDSGKLVEKISVDEIEKIVK 236
>sp|C6A459|PSA_THESM Proteasome subunit alpha OS=Thermococcus sibiricus (strain MM 739 /
DSM 12597) GN=psmA PE=3 SV=1
Length = 260
Score = 209 bits (533), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 108/229 (47%), Positives = 156/229 (68%), Gaps = 14/229 (6%)
Query: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKI 67
YDR + FSP+GRLFQV+YA EA+K G+TA+G+K K+GVVLAVEKR+TS L+EP S EKI
Sbjct: 10 YDRAITVFSPDGRLFQVQYAREAVKRGATAVGVKCKDGVVLAVEKRVTSKLIEPESYEKI 69
Query: 68 MEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLA---LRFG 124
+ID+HI A SG+IADAR LV+ AR+E Q +R +YGEP+ + + +CDL ++G
Sbjct: 70 FQIDDHIAAASSGIIADARVLVDRARLEAQIYRLTYGEPVPLTVLVKKICDLKQMHTQYG 129
Query: 125 EGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYN 184
RPFG +LL+AG +E P L+ TDPSG +++ A AIGSG A + +E+Y
Sbjct: 130 G------VRPFGAALLMAGVNEK-PELFETDPSGAYFEWKAVAIGSGRNTAMAIFEEKYR 182
Query: 185 KDLTLQEAETIALSILKQVMEEKVTPNNVDIARVA---PTYHLYTPSEV 230
++TL+EA +A+ L ++MEE +P ++++A ++ + TP EV
Sbjct: 183 DEMTLEEAIKLAVLALSKIMEEP-SPESIEVAVISVKEKKFKKITPEEV 230
>sp|A6VIP0|PSA_METM7 Proteasome subunit alpha OS=Methanococcus maripaludis (strain C7 /
ATCC BAA-1331) GN=psmA PE=3 SV=1
Length = 259
Score = 208 bits (530), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 105/231 (45%), Positives = 155/231 (67%), Gaps = 7/231 (3%)
Query: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKI 67
YDR + FSPEGRL+QVEYA EA++ G+TA+G+K K+GVVLAV++RITS L++ SS+EKI
Sbjct: 10 YDRAITIFSPEGRLYQVEYAREAVRRGTTAVGIKCKDGVVLAVDRRITSKLIDVSSIEKI 69
Query: 68 MEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGD 127
+ID+HI A SGL+ADAR L++ AR+E Q +R SYGE +TVE+ + +CD+ +
Sbjct: 70 FQIDDHIVAATSGLVADARVLIDRARLEAQMNRISYGEAITVEALAKKICDIKQAY---T 126
Query: 128 EESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNKDL 187
+ +RPFG++LLI G D + L+ TDPSG + A AIGSG A L+ +Y++++
Sbjct: 127 QHGGARPFGLALLITGIDRHSARLFETDPSGALIEYKATAIGSGRPIAMEVLESKYDENM 186
Query: 188 TLQEAETIALSILKQVMEEKVTPNNVDIARVAPTYHLY---TPSEVEAVIN 235
T+ E +AL L + EE + P N+D+A V + L + E+E ++
Sbjct: 187 TVNEGMELALYALSKTTEE-LKPENIDMAIVKDSGKLVEKISVDEIEKIVK 236
>sp|O26782|PSA_METTH Proteasome subunit alpha OS=Methanothermobacter thermautotrophicus
(strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330
/ Delta H) GN=psmA PE=3 SV=1
Length = 248
Score = 208 bits (529), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 100/209 (47%), Positives = 142/209 (67%), Gaps = 3/209 (1%)
Query: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKI 67
YDR + FSP+GRLFQVEYA EA+K G+T++G+K+KEG+VL V+KR TS L+EP S+EKI
Sbjct: 9 YDRAITVFSPDGRLFQVEYAREAVKRGTTSLGVKSKEGIVLVVDKRPTSKLVEPKSIEKI 68
Query: 68 MEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGD 127
+IDEHIG A SGL+ADAR ++E AR+E Q +R +Y EP+ VES + +CD+ +
Sbjct: 69 FQIDEHIGAATSGLVADARAIIEKARLEAQINRITYNEPIRVESLAKKICDMKQMY---T 125
Query: 128 EESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNKDL 187
+ RPFG +L+I G + G L+ TDPSG + A AIG+G A +++Y+ D+
Sbjct: 126 QHGGVRPFGTALIIGGVNGRGCRLFETDPSGALIEYKATAIGAGRPAAMEEFEKKYSDDM 185
Query: 188 TLQEAETIALSILKQVMEEKVTPNNVDIA 216
L +A +AL + + E K TP +V+IA
Sbjct: 186 NLNQAIELALDAVYEATEGKTTPESVEIA 214
>sp|Q6M0L9|PSA_METMP Proteasome subunit alpha OS=Methanococcus maripaludis (strain S2 /
LL) GN=psmA PE=3 SV=1
Length = 259
Score = 207 bits (528), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 104/231 (45%), Positives = 155/231 (67%), Gaps = 7/231 (3%)
Query: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKI 67
YDR + FSPEGRL+QVEYA EA++ G+TA+G+K K+GVVLAV++RITS L++ SS+EKI
Sbjct: 10 YDRAITIFSPEGRLYQVEYAREAVRRGTTAVGIKCKDGVVLAVDRRITSKLIDVSSIEKI 69
Query: 68 MEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGD 127
+ID+HI A SGL+ADAR L++ AR+E Q +R SYGE +TVE+ + +CD+ +
Sbjct: 70 FQIDDHIVAATSGLVADARVLIDRARIEAQMNRVSYGEAITVEALAKKICDIKQAY---T 126
Query: 128 EESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNKDL 187
+ +RPFG++LLI G D + L+ TDPSG + A AIGSG A L+ +Y++++
Sbjct: 127 QHGGARPFGLALLITGIDRHSARLFETDPSGALIEYKATAIGSGRPIAMEVLESKYDENM 186
Query: 188 TLQEAETIALSILKQVMEEKVTPNNVDIARVAPTYHLY---TPSEVEAVIN 235
T+ E +AL L + EE + P N+D+A + + L + E+E ++
Sbjct: 187 TVSEGMELALYALSKTTEE-LKPENIDMAIIKDSGKLVEKISVDEIEKIVK 236
>sp|O59219|PSA_PYRHO Proteasome subunit alpha OS=Pyrococcus horikoshii (strain ATCC
700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
GN=psmA PE=3 SV=1
Length = 260
Score = 206 bits (525), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 106/209 (50%), Positives = 140/209 (66%), Gaps = 5/209 (2%)
Query: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKI 67
YDR + FSP+GRLFQV YA EA+K G+TA+G+K EGVVLAVEKRITS L+EP S EKI
Sbjct: 10 YDRAITVFSPDGRLFQVNYAREAVKRGATAVGVKCNEGVVLAVEKRITSRLIEPESYEKI 69
Query: 68 MEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGD 127
+ID+HI A SG+IADAR LV AR+E Q HR +YGEP + + +CDL
Sbjct: 70 FQIDDHIAAASSGIIADARVLVNRARLEAQIHRLTYGEPAPLAVIVKKICDLKQMH---T 126
Query: 128 EESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNKDL 187
+ RPFG +LL+AG +E P LY TDPSG ++ A AIGSG A + +E+Y D+
Sbjct: 127 QYGGVRPFGAALLMAGVNEK-PELYETDPSGAYFAWKAVAIGSGRNTAMAIFEEKYKDDM 185
Query: 188 TLQEAETIALSILKQVMEEKVTPNNVDIA 216
+L+EA +A+ L + M EK + N+++A
Sbjct: 186 SLEEAIKLAIFALAKTM-EKPSAENIEVA 213
>sp|O29760|PSA_ARCFU Proteasome subunit alpha OS=Archaeoglobus fulgidus (strain ATCC
49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
GN=psmA PE=1 SV=1
Length = 246
Score = 206 bits (524), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 105/239 (43%), Positives = 149/239 (62%), Gaps = 7/239 (2%)
Query: 1 MFLTRTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLE 60
M L + YDR + FSP+GRLFQVEYA EA+K G+TAIG+K KEGV+L +KR+ S LLE
Sbjct: 1 MHLPQMGYDRAITVFSPDGRLFQVEYAREAVKRGATAIGIKCKEGVILIADKRVGSKLLE 60
Query: 61 PSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLA 120
++EKI +IDEHI A SGL+ADAR L++ AR+E Q +R +Y EP+TV+ + +CD
Sbjct: 61 ADTIEKIYKIDEHICAATSGLVADARVLIDRARIEAQINRLTYDEPITVKELAKKICDFK 120
Query: 121 LRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQ 180
++ + RPFGVSLLIAG DE P LY TDPSG + A AIG G +
Sbjct: 121 QQY---TQYGGVRPFGVSLLIAGVDEV-PKLYETDPSGALLEYKATAIGMGRNAVTEFFE 176
Query: 181 EQYNKDLTLQEAETIALSILKQVMEEKVTPNNVDIARVA---PTYHLYTPSEVEAVINR 236
++Y DL+ +A + L + +E ++ P N+++ V T+ +P E++ + R
Sbjct: 177 KEYRDDLSFDDAMVLGLVAMGLSIESELVPENIEVGYVKVDDRTFKEVSPEELKPYVER 235
>sp|Q9V122|PSA_PYRAB Proteasome subunit alpha OS=Pyrococcus abyssi (strain GE5 / Orsay)
GN=psmA PE=3 SV=1
Length = 260
Score = 205 bits (522), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 105/209 (50%), Positives = 140/209 (66%), Gaps = 5/209 (2%)
Query: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKI 67
YDR + FSP+GRLFQV YA EA+K G+TA+G+K K+GVVLAVEKRITS L+EP S EKI
Sbjct: 10 YDRAITVFSPDGRLFQVNYAREAVKRGATAVGVKCKDGVVLAVEKRITSRLIEPESYEKI 69
Query: 68 MEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGD 127
+ID+HI A SG+IADAR LV AR+E Q HR +YGEP + + +CDL
Sbjct: 70 FQIDDHIAAASSGIIADARVLVNRARLEAQIHRLTYGEPAPLAVIVKKICDLKQMH---T 126
Query: 128 EESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNKDL 187
+ RPFG +LL+AG ++ P LY TDPSG ++ A AIGSG A + +++Y D+
Sbjct: 127 QYGGVRPFGAALLMAGVNDK-PELYETDPSGAYFAWKAVAIGSGRNTAMAIFEDKYRDDM 185
Query: 188 TLQEAETIALSILKQVMEEKVTPNNVDIA 216
TL EA +A+ L + M EK + N+++A
Sbjct: 186 TLDEAIKLAIFALAKTM-EKPSAENIEVA 213
>sp|A9A846|PSA_METM6 Proteasome subunit alpha OS=Methanococcus maripaludis (strain C6 /
ATCC BAA-1332) GN=psmA PE=3 SV=1
Length = 259
Score = 204 bits (519), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 103/231 (44%), Positives = 153/231 (66%), Gaps = 7/231 (3%)
Query: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKI 67
YDR + FSPEGRL+QVEYA EA++ G+TA+G+K +GVVLAV++RITS L++ SS+EKI
Sbjct: 10 YDRAITIFSPEGRLYQVEYAREAVRRGTTAVGIKCNDGVVLAVDRRITSKLIDVSSIEKI 69
Query: 68 MEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGD 127
+ID+HI A SGL+ADAR L++ AR+E Q +R SYGE +TVE+ + +CD+ +
Sbjct: 70 FQIDDHIVAATSGLVADARVLIDRARLEAQMNRISYGEAITVEALAKKICDIKQAY---T 126
Query: 128 EESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNKDL 187
+ +RPFG++LLI G D + L+ TDPSG + A AIGSG A L+ +Y++++
Sbjct: 127 QHGGARPFGLALLITGIDRHSARLFETDPSGALIEYKATAIGSGRPIAMEVLESKYDENM 186
Query: 188 TLQEAETIALSILKQVMEEKVTPNNVDIARVAPTYHLY---TPSEVEAVIN 235
+ E +AL L + EE + P N+D+A V + L + E+E ++
Sbjct: 187 IVSEGMELALYALSKTTEE-LKPENIDMAIVKDSGKLVEKISVDEIEKIVK 236
>sp|B6YSH9|PSA_THEON Proteasome subunit alpha OS=Thermococcus onnurineus (strain NA1)
GN=psmA PE=3 SV=1
Length = 260
Score = 204 bits (518), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 104/214 (48%), Positives = 147/214 (68%), Gaps = 11/214 (5%)
Query: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKI 67
YDR + FSP+GRLFQV YA EA+K G+TA+G+K KEGVVLAVEKRITS L+EPSS EKI
Sbjct: 10 YDRAITVFSPDGRLFQVNYAREAVKRGATAVGVKWKEGVVLAVEKRITSKLIEPSSYEKI 69
Query: 68 MEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLA---LRFG 124
+ID+HI A SG+IADAR LV+ AR+E Q +R +YGEP+ + + +CDL ++G
Sbjct: 70 FQIDDHIAAAPSGIIADARVLVDRARLEAQVYRLTYGEPVPLTVLVKKICDLKQAHTQYG 129
Query: 125 EGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYN 184
RPFG +LL+AG ++ P LY TDPSG +++ A AIGSG A + ++ Y+
Sbjct: 130 G------VRPFGAALLMAGVNDK-PELYETDPSGAYFEWRAVAIGSGRNTAMAIFEDHYS 182
Query: 185 KDLTLQEAETIALSILKQVMEEKVTPNNVDIARV 218
DL ++ A +A+ L + +EE +P ++++A +
Sbjct: 183 DDLDMEGAIKLAILALAKTLEEP-SPESIEVAYI 215
>sp|Q60177|PSA_METJA Proteasome subunit alpha OS=Methanocaldococcus jannaschii (strain
ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
GN=psmA PE=1 SV=1
Length = 261
Score = 203 bits (516), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 99/208 (47%), Positives = 142/208 (68%), Gaps = 4/208 (1%)
Query: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKI 67
YDR + FSPEGRL+QVEYA EA++ G+TAIG+ K+GVVLAV++RITS L++ S+EKI
Sbjct: 9 YDRAITVFSPEGRLYQVEYAREAVRRGTTAIGIACKDGVVLAVDRRITSKLVKIRSIEKI 68
Query: 68 MEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGD 127
+ID+H+ A SGL+ADAR L++ AR+E Q +R +YGE +++E + +CD+ +
Sbjct: 69 FQIDDHVAAATSGLVADARVLIDRARLEAQIYRLTYGEEISIEMLAKKICDIKQAYT--- 125
Query: 128 EESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNKDL 187
+ RPFGVSLLIAG D+N L+ TDPSG + A AIGSG L+++Y D+
Sbjct: 126 QHGGVRPFGVSLLIAGIDKNEARLFETDPSGALIEYKATAIGSGRPVVMELLEKEYRDDI 185
Query: 188 TLQEAETIALSILKQVMEEKVTPNNVDI 215
TL E +A++ L + E+ + P NVD+
Sbjct: 186 TLDEGLELAITALTKANED-IKPENVDV 212
>sp|Q8U0L6|PSA_PYRFU Proteasome subunit alpha OS=Pyrococcus furiosus (strain ATCC 43587
/ DSM 3638 / JCM 8422 / Vc1) GN=psmA PE=3 SV=1
Length = 260
Score = 202 bits (513), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 105/212 (49%), Positives = 141/212 (66%), Gaps = 11/212 (5%)
Query: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKI 67
YDR + FSP+GRLFQV YA EA+K G+TA+G+K EGVVLAVEKRITS L+EP S EKI
Sbjct: 10 YDRAITVFSPDGRLFQVNYAREAVKRGATAVGVKCGEGVVLAVEKRITSRLIEPDSYEKI 69
Query: 68 MEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLA---LRFG 124
+ID+HI A SG+IADAR LV AR+E Q +R +YGEP V + +CDL ++G
Sbjct: 70 FQIDDHIAAASSGIIADARVLVNRARLEAQIYRLTYGEPAPVSVIVKKICDLKQMHTQYG 129
Query: 125 EGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYN 184
RPFG +LL+AG ++ P LY TDPSG ++ A AIGSG A + +E+Y
Sbjct: 130 G------VRPFGAALLMAGINDR-PELYETDPSGAYFAWKAVAIGSGRNTAMAIFEEKYR 182
Query: 185 KDLTLQEAETIALSILKQVMEEKVTPNNVDIA 216
D+ L++A +AL L + ME + +N+++A
Sbjct: 183 DDMNLEDAIKLALMALAKTMENP-SADNIEVA 213
>sp|C5A2C2|PSA_THEGJ Proteasome subunit alpha OS=Thermococcus gammatolerans (strain DSM
15229 / JCM 11827 / EJ3) GN=psmA PE=3 SV=1
Length = 260
Score = 201 bits (512), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 103/211 (48%), Positives = 144/211 (68%), Gaps = 5/211 (2%)
Query: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKI 67
YDR + FSP+GRLFQV YA EA+K G+TA+G+K K GVVLAVEKRITS L+EPSS EKI
Sbjct: 10 YDRAITVFSPDGRLFQVNYAREAVKRGATAVGVKWKGGVVLAVEKRITSRLIEPSSYEKI 69
Query: 68 MEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGD 127
+ID+HI A SG+IADAR LV+ AR+E Q +R +YGEP+ + + +CDL
Sbjct: 70 FQIDDHIAAAPSGIIADARVLVDRARLEAQIYRLTYGEPVPLTVLVKKICDLK---QAHT 126
Query: 128 EESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNKDL 187
+ RPFG +LL+AG +E P LY TDPSG +++ A AIGSG A + +E Y+ D+
Sbjct: 127 QYGGVRPFGAALLMAGVNEK-PELYETDPSGAYFEWKAVAIGSGRNTAMAIFEEHYSDDI 185
Query: 188 TLQEAETIALSILKQVMEEKVTPNNVDIARV 218
++ A +A+ L + +EE +P ++++A +
Sbjct: 186 DMEGAIKLAILALAKTLEEP-SPESIEVAYI 215
>sp|Q8TPX5|PSA_METAC Proteasome subunit alpha OS=Methanosarcina acetivorans (strain ATCC
35395 / DSM 2834 / JCM 12185 / C2A) GN=psmA PE=3 SV=1
Length = 247
Score = 201 bits (511), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 102/233 (43%), Positives = 144/233 (61%), Gaps = 6/233 (2%)
Query: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKI 67
YDR + FSP+GRLFQVEYA EA+K G+TA+G+K +GVVL V+KRITS L+E S+EKI
Sbjct: 7 YDRAITVFSPDGRLFQVEYAREAVKRGTTAVGIKAADGVVLLVDKRITSRLVEAESIEKI 66
Query: 68 MEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGD 127
+IDEHIG A SGL+ADAR+LV+ ARVE Q +R SY EP+ VE ++ +CD +
Sbjct: 67 FQIDEHIGAATSGLVADARSLVDRARVEAQVNRVSYDEPIGVEVISKKICDHKQTY---T 123
Query: 128 EESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNKDL 187
+ RP+G +LLIAG D+N P L+ TDPSG + A AIG+G + Y +D+
Sbjct: 124 QYGGVRPYGTALLIAGVDDNKPRLFETDPSGALLEYKATAIGAGRNAVVEVFEADYREDM 183
Query: 188 TLQEAETIALSILKQVMEEKVTPNNVDIARVA---PTYHLYTPSEVEAVINRL 237
+ A + + L + E K +++ V+ + P EVE + ++
Sbjct: 184 NMDAAILLGMDALYKAAEGKFDAGTLEVGVVSLEDKKFRKLGPEEVENYVQQI 236
>sp|Q469M6|PSA_METBF Proteasome subunit alpha OS=Methanosarcina barkeri (strain Fusaro /
DSM 804) GN=psmA PE=3 SV=1
Length = 249
Score = 200 bits (509), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 101/233 (43%), Positives = 146/233 (62%), Gaps = 6/233 (2%)
Query: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKI 67
YDR + FSP+GRLFQVEYA EA+K G+TA+G+K +GVVL V+KRITS L+E S+EKI
Sbjct: 9 YDRAITVFSPDGRLFQVEYAREAVKRGTTAVGIKAADGVVLLVDKRITSRLVEAESIEKI 68
Query: 68 MEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGD 127
+ID+HIG A SGL+ADAR+LV+ ARVE Q +R SY EP+ VE ++ +CD +
Sbjct: 69 FQIDDHIGAATSGLVADARSLVDRARVEAQVNRVSYDEPIGVEVISKKICDHKQTY---T 125
Query: 128 EESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNKDL 187
+ RP+G +LLIAG D+N P L+ TDPSG + A AIG+G + +Y +D+
Sbjct: 126 QYGGVRPYGTALLIAGVDDNLPRLFETDPSGALLEYKATAIGAGRNAVVEVFEAEYRQDM 185
Query: 188 TLQEAETIALSILKQVMEEKVTPNNVDIARVA---PTYHLYTPSEVEAVINRL 237
+ A + + L + E K + +++ V+ + P EVE + ++
Sbjct: 186 NMDAAILLGMDALYRAAEGKFDASTLEVGIVSLQDKKFRKLVPEEVENYVQQI 238
>sp|Q9V2V6|PSA1_HALVD Proteasome subunit alpha 1 OS=Haloferax volcanii (strain ATCC 29605
/ DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM
B-1768 / DS2) GN=psmA1 PE=1 SV=2
Length = 252
Score = 198 bits (503), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 98/212 (46%), Positives = 141/212 (66%), Gaps = 3/212 (1%)
Query: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKI 67
YDRG+ FSP+GRL+QVEYA EA+K G+ +IG++T EGVVLA +KR SPL+EP+SVEKI
Sbjct: 10 YDRGITIFSPDGRLYQVEYAREAVKRGTASIGVRTPEGVVLAADKRSRSPLMEPTSVEKI 69
Query: 68 MEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGD 127
+ D+HIG A +G +ADAR L++ AR ++Q +R YGEP+ +E+ T+ + D ++
Sbjct: 70 HKADDHIGIASAGHVADARQLIDFARRQSQVNRLRYGEPIGIETLTKEVTDHIQQY---T 126
Query: 128 EESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNKDL 187
+ +RPFGV+LLI G + P LY TDPSGT ++ A +IG+ L+E + DL
Sbjct: 127 QVGGARPFGVALLIGGVENGTPRLYETDPSGTPYEWKAVSIGADRGDHQEHLEENFRDDL 186
Query: 188 TLQEAETIALSILKQVMEEKVTPNNVDIARVA 219
TL E +AL + +E P+ VD+A V+
Sbjct: 187 TLDEGIELALEAIASTSDEGTAPDGVDVATVS 218
>sp|Q5JIU9|PSA_PYRKO Proteasome subunit alpha OS=Pyrococcus kodakaraensis (strain ATCC
BAA-918 / JCM 12380 / KOD1) GN=psmA PE=3 SV=1
Length = 260
Score = 196 bits (499), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 102/211 (48%), Positives = 140/211 (66%), Gaps = 5/211 (2%)
Query: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKI 67
YDR + FSP+GRLFQV YA EA+K G+TA+G+K K+GVVLAVEKRITS L+EPSS EKI
Sbjct: 10 YDRAITVFSPDGRLFQVNYAREAVKRGATAVGVKWKDGVVLAVEKRITSKLIEPSSYEKI 69
Query: 68 MEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGD 127
ID+HI A SG+IADAR LV+ AR+E Q +R +YGEP+ + + +CDL
Sbjct: 70 FLIDDHIAAAPSGIIADARVLVDRARLEAQIYRLTYGEPVPLTVLVKKICDLK---QAHT 126
Query: 128 EESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNKDL 187
+ RPFG +LL+AG +E P L+ TDPSG +++ A AIGSG A + +E Y D+
Sbjct: 127 QYGGVRPFGAALLMAGVNEK-PELFETDPSGAYFEWKAVAIGSGRNTAMAIFEEHYRDDI 185
Query: 188 TLQEAETIALSILKQVMEEKVTPNNVDIARV 218
+A +A+ L + +EE T +++A +
Sbjct: 186 GKDDAIKLAILALAKTLEEP-TAEGIEVAYI 215
>sp|O24733|PSA_THEK1 Proteasome subunit alpha OS=Thermococcus sp. (strain KS-1) GN=psmA
PE=3 SV=1
Length = 260
Score = 196 bits (499), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 102/211 (48%), Positives = 140/211 (66%), Gaps = 5/211 (2%)
Query: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKI 67
YDR + FSP+GRLFQV YA EA+K G+TA+G+K K+GVVLAVEKRITS L+EPSS EKI
Sbjct: 10 YDRAITVFSPDGRLFQVNYAREAVKRGATAVGVKWKDGVVLAVEKRITSKLIEPSSYEKI 69
Query: 68 MEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGD 127
ID+HI A SG+IADAR LV+ AR+E Q +R +YGEP+ + + +CDL
Sbjct: 70 FLIDDHIAAAPSGIIADARVLVDRARLEAQIYRLTYGEPVPLTVLVKKICDLK---QAHT 126
Query: 128 EESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNKDL 187
+ RPFG +LL+AG +E P L+ TDPSG +++ A AIGSG A + +E Y D+
Sbjct: 127 QYGGVRPFGAALLMAGVNEK-PELFETDPSGAYFEWKAVAIGSGRNTAMAIFEEHYRDDI 185
Query: 188 TLQEAETIALSILKQVMEEKVTPNNVDIARV 218
+A +A+ L + +EE T +++A +
Sbjct: 186 GKDDAIKLAILALAKTLEEP-TAEGIEVAYI 215
>sp|Q8PTU1|PSA_METMA Proteasome subunit alpha OS=Methanosarcina mazei (strain ATCC
BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88)
GN=psmA PE=3 SV=1
Length = 249
Score = 196 bits (498), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 100/233 (42%), Positives = 144/233 (61%), Gaps = 6/233 (2%)
Query: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKI 67
YDR + FSP+GRLFQVEYA EA+K G+TA+G+K +GVVL V+KRITS L+E S+EKI
Sbjct: 9 YDRAITVFSPDGRLFQVEYAREAVKRGTTAVGIKAADGVVLLVDKRITSRLVEAESIEKI 68
Query: 68 MEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGD 127
+ID+HIG A SGL+ADAR+LV+ ARVE Q +R SY E + VE ++ +CD +
Sbjct: 69 FQIDDHIGAATSGLVADARSLVDRARVEAQVNRVSYDELIGVEVISKKICDHKQTY---T 125
Query: 128 EESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNKDL 187
+ RP+G +LLIAG D+N P L+ TDPSG + A AIG+G + Y +D+
Sbjct: 126 QYGGVRPYGTALLIAGVDDNKPRLFETDPSGALLEYKATAIGAGRNAVVEVFEADYREDM 185
Query: 188 TLQEAETIALSILKQVMEEKVTPNNVDIARVA---PTYHLYTPSEVEAVINRL 237
+ A + + L + E K +++ V+ + P EVE ++++
Sbjct: 186 NIDAAILLGMDALYKAAEGKFDAGTLEVGVVSLEDKKFRKLGPEEVENYVHQI 238
>sp|B8GEZ3|PSA_METPE Proteasome subunit alpha OS=Methanosphaerula palustris (strain ATCC
BAA-1556 / DSM 19958 / E1-9c) GN=psmA PE=3 SV=1
Length = 241
Score = 193 bits (491), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 102/236 (43%), Positives = 145/236 (61%), Gaps = 12/236 (5%)
Query: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKI 67
YDR + FSP+GRL+QVEYA EA+K G+TA+G+K +G+VL V+KR+ S LLEPSS+EKI
Sbjct: 9 YDRAITVFSPDGRLYQVEYAREAVKRGTTAVGIKCNDGIVLLVDKRVNSKLLEPSSIEKI 68
Query: 68 MEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCD---LALRFG 124
+ID HIG A SGL+ DAR+LV+ ARVE+Q +R SY E + VE ++ LCD +FG
Sbjct: 69 FKIDNHIGVASSGLVGDARSLVDRARVESQVNRVSYDEQIDVEMLSKKLCDHMQTYTQFG 128
Query: 125 EGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYN 184
+RP+G +LLIAG + L+ TDPSGT + A IG G +E+YN
Sbjct: 129 G------ARPYGTALLIAGISDGQFRLFETDPSGTLLEYKATGIGIGRNAVMKVFEEEYN 182
Query: 185 KDLTLQEAETIALSILKQVMEEKVTPNNVDIARV---APTYHLYTPSEVEAVINRL 237
+ ++++A + L L E K N V+I V P + + EV + + ++
Sbjct: 183 PEASIRDAILLGLKALHAATEGKFDVNTVEIGVVNNDTPAFRKMSRQEVASFVEQI 238
>sp|Q18K08|PSA_HALWD Proteasome subunit alpha OS=Haloquadratum walsbyi (strain DSM
16790) GN=psmA PE=3 SV=1
Length = 250
Score = 191 bits (486), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 93/212 (43%), Positives = 143/212 (67%), Gaps = 3/212 (1%)
Query: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKI 67
YDRG+ FSP+GRL+QVEYA EA+K G+ ++G++T +G+VLA +KR SPL+EP+SVEKI
Sbjct: 10 YDRGITIFSPDGRLYQVEYAREAVKRGTASVGIRTPDGIVLAADKRSRSPLMEPTSVEKI 69
Query: 68 MEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGD 127
+ D+H+G A +G +ADAR L++ AR + Q +R YGEP+ +E+ T+ + D ++
Sbjct: 70 HKTDDHVGIASAGHVADARQLIDFARRQAQVNRLRYGEPVGIETLTKNVTDNIQQY---T 126
Query: 128 EESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNKDL 187
+ +RPFGV+LLI G ++ P LY TDPSGT ++ A +IG+ L+E Y ++L
Sbjct: 127 QVGGARPFGVALLIGGIEDGSPRLYETDPSGTPYEWKAVSIGADRSDLQEHLEENYTEEL 186
Query: 188 TLQEAETIALSILKQVMEEKVTPNNVDIARVA 219
+L E +AL + ++++T VD+A VA
Sbjct: 187 SLDEGVGLALRTIAISNDDELTAAGVDVATVA 218
>sp|Q59565|PSA_METTE Proteasome subunit alpha OS=Methanosarcina thermophila GN=psmA PE=3
SV=1
Length = 247
Score = 191 bits (484), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 99/228 (43%), Positives = 139/228 (60%), Gaps = 3/228 (1%)
Query: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKI 67
YDR + FSP+GRLFQVEYA EA+K G+TA+G+K +GVVL V+KRITS L+E S+EKI
Sbjct: 7 YDRAITVFSPDGRLFQVEYAREAVKRGTTAVGIKAADGVVLLVDKRITSRLVEAESIEKI 66
Query: 68 MEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGD 127
+ID+HIG A SGL+ADAR LV+ ARVE Q +R SY E + VE ++ +CD +
Sbjct: 67 FQIDDHIGAATSGLVADARALVDRARVEAQVNRVSYDELIGVEVISKKICDHKQTY---T 123
Query: 128 EESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNKDL 187
+ RP+G +LLIAG D+ P L+ TDPSG + A AIG+G + Y +D+
Sbjct: 124 QYGGVRPYGTALLIAGVDDKRPRLFETDPSGALLEYKATAIGAGRNAVVEVFEADYKEDM 183
Query: 188 TLQEAETIALSILKQVMEEKVTPNNVDIARVAPTYHLYTPSEVEAVIN 235
++ A + + L + E K +++ V+ + E E V N
Sbjct: 184 NIEAAILLGMDALYKAAEGKFDAGTLEVGVVSLQDKKFRKLEPEEVGN 231
>sp|A3CW55|PSA_METMJ Proteasome subunit alpha OS=Methanoculleus marisnigri (strain ATCC
35101 / DSM 1498 / JR1) GN=psmA PE=3 SV=1
Length = 240
Score = 190 bits (482), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 98/215 (45%), Positives = 136/215 (63%), Gaps = 9/215 (4%)
Query: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKI 67
YDR + FSP+GRL+QVEYA EA+K G+TA+G+K EGVVL V+KR+TS LLEP S+EKI
Sbjct: 9 YDRAITVFSPDGRLYQVEYAREAVKRGTTAVGIKCSEGVVLIVDKRVTSRLLEPVSIEKI 68
Query: 68 MEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCD---LALRFG 124
+ID HIG A SGL+ DAR+LV+ ARVE+Q +R SY EP+ VE + LCD +FG
Sbjct: 69 FKIDAHIGVASSGLVGDARSLVDRARVESQINRVSYNEPINVEILAKKLCDHMQTYTQFG 128
Query: 125 EGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYN 184
+RP+G +LLIAG + L+ TDPSGT + A IG+G + +++Y
Sbjct: 129 G------ARPYGTALLIAGVSDGEARLFETDPSGTLLEYKATGIGTGRPAVIKTFEDEYQ 182
Query: 185 KDLTLQEAETIALSILKQVMEEKVTPNNVDIARVA 219
+D A + + L E K+ + ++I V+
Sbjct: 183 EDADFSGAIRLGIKALHAATEGKLDVSAIEIGVVS 217
>sp|Q5V2X8|PSA1_HALMA Proteasome subunit alpha 1 OS=Haloarcula marismortui (strain ATCC
43049 / DSM 3752 / JCM 8966 / VKM B-1809) GN=psmA1 PE=3
SV=1
Length = 260
Score = 190 bits (482), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 99/228 (43%), Positives = 148/228 (64%), Gaps = 6/228 (2%)
Query: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKI 67
YDRG+ FSP+GRL+QVEYA EA+K G+ +IG++T +GVVLAV+KRI SPL+E SSVEKI
Sbjct: 10 YDRGITIFSPDGRLYQVEYAREAVKRGTASIGVRTSDGVVLAVDKRIRSPLMERSSVEKI 69
Query: 68 MEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGD 127
+ D+HIG A +G +ADAR L++ AR + Q ++ YGEP+ VE+ T+ + D ++
Sbjct: 70 HKADDHIGIASAGHVADARQLIDFARRQAQVNQLRYGEPVGVETLTKEITDYIQQY---T 126
Query: 128 EESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNKDL 187
+ +RPFGV+L+I G P L+ TDPSGT ++ A A+G+ L+E Y++ +
Sbjct: 127 QVGGARPFGVALIIGGIVNGEPRLFETDPSGTPYEWKALAVGADRGDIRDYLEEHYDEGM 186
Query: 188 TLQEAETIALSILKQVMEEKVTPNNVDIARV---APTYHLYTPSEVEA 232
L E +AL+ L V +++++P + +A V T+ T E EA
Sbjct: 187 DLDEGVDLALAALASVNDDELSPEGIGVATVDVETETFGQLTDEEKEA 234
>sp|A7I9C7|PSA_METB6 Proteasome subunit alpha OS=Methanoregula boonei (strain 6A8)
GN=psmA PE=3 SV=1
Length = 240
Score = 189 bits (479), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 98/211 (46%), Positives = 132/211 (62%), Gaps = 3/211 (1%)
Query: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKI 67
YDR + FSP+GRL+QVEYA EA+K G+TA+G+K +GVVL V+KR++S LLE SS+EKI
Sbjct: 9 YDRAITVFSPDGRLYQVEYAREAVKRGTTAVGIKAHDGVVLIVDKRVSSKLLESSSIEKI 68
Query: 68 MEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGD 127
+IDEHIG A SGL+ DAR LV+ AR+E Q +R SY E + VE+ + LCD
Sbjct: 69 FKIDEHIGVASSGLVGDARALVDRARIECQINRVSYDERIEVEALAKKLCDHMQTL---T 125
Query: 128 EESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNKDL 187
+ RP+G +LLIAG + L+ TDPSGT + A IG G A +E+Y DL
Sbjct: 126 QYGGIRPYGTALLIAGVSDGESRLFETDPSGTLLEYKATGIGIGRPAAMKVFEEEYTADL 185
Query: 188 TLQEAETIALSILKQVMEEKVTPNNVDIARV 218
L++A + L L E K + V++ V
Sbjct: 186 ALKDAILLGLKALHSATEGKFDVDTVEMGIV 216
>sp|C3NEC6|PSA_SULIY Proteasome subunit alpha OS=Sulfolobus islandicus (strain Y.G.57.14
/ Yellowstone #1) GN=psmA PE=3 SV=1
Length = 241
Score = 186 bits (473), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 91/210 (43%), Positives = 137/210 (65%), Gaps = 5/210 (2%)
Query: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKI 67
YDR + FSP+G L+QV+YA EA+K G TAIG+K+K GVV+A EKR LL+ S+EK+
Sbjct: 10 YDRAITIFSPDGSLYQVDYAFEAVKKGWTAIGIKSKSGVVIASEKRKAQSLLDVDSIEKV 69
Query: 68 MEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGD 127
ID+H+GC+ +GL +D R L+++AR HR Y EP++++ T+++ D+ +
Sbjct: 70 FLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMY---T 126
Query: 128 EESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNKDL 187
+ RPFGV+L+IAG D++ P LY T+PSG + A AIG G A L++ Y +DL
Sbjct: 127 QHGGVRPFGVALVIAGIDKSVPKLYMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYKEDL 186
Query: 188 TLQEAETIALSILKQVME--EKVTPNNVDI 215
T+++ +AL L ++ EK+TPN V+I
Sbjct: 187 TIEDTILLALKALSATLKPNEKLTPNTVEI 216
>sp|C3NHC6|PSA_SULIN Proteasome subunit alpha OS=Sulfolobus islandicus (strain Y.N.15.51
/ Yellowstone #2) GN=psmA PE=3 SV=1
Length = 241
Score = 186 bits (473), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 91/210 (43%), Positives = 137/210 (65%), Gaps = 5/210 (2%)
Query: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKI 67
YDR + FSP+G L+QV+YA EA+K G TAIG+K+K GVV+A EKR LL+ S+EK+
Sbjct: 10 YDRAITIFSPDGSLYQVDYAFEAVKKGWTAIGIKSKSGVVIASEKRKAQSLLDVDSIEKV 69
Query: 68 MEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGD 127
ID+H+GC+ +GL +D R L+++AR HR Y EP++++ T+++ D+ +
Sbjct: 70 FLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMY---T 126
Query: 128 EESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNKDL 187
+ RPFGV+L+IAG D++ P LY T+PSG + A AIG G A L++ Y +DL
Sbjct: 127 QHGGVRPFGVALVIAGIDKSVPKLYMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYKEDL 186
Query: 188 TLQEAETIALSILKQVME--EKVTPNNVDI 215
T+++ +AL L ++ EK+TPN V+I
Sbjct: 187 TIEDTILLALKALSATLKPNEKLTPNTVEI 216
>sp|C3MVG1|PSA_SULIM Proteasome subunit alpha OS=Sulfolobus islandicus (strain M.14.25 /
Kamchatka #1) GN=psmA PE=3 SV=1
Length = 241
Score = 186 bits (473), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 91/210 (43%), Positives = 137/210 (65%), Gaps = 5/210 (2%)
Query: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKI 67
YDR + FSP+G L+QV+YA EA+K G TAIG+K+K GVV+A EKR LL+ S+EK+
Sbjct: 10 YDRAITIFSPDGSLYQVDYAFEAVKKGWTAIGIKSKSGVVIASEKRKAQSLLDVDSIEKV 69
Query: 68 MEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGD 127
ID+H+GC+ +GL +D R L+++AR HR Y EP++++ T+++ D+ +
Sbjct: 70 FLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMY---T 126
Query: 128 EESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNKDL 187
+ RPFGV+L+IAG D++ P LY T+PSG + A AIG G A L++ Y +DL
Sbjct: 127 QHGGVRPFGVALVIAGIDKSVPKLYMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYKEDL 186
Query: 188 TLQEAETIALSILKQVME--EKVTPNNVDI 215
T+++ +AL L ++ EK+TPN V+I
Sbjct: 187 TIEDTILLALKALSATLKPNEKLTPNTVEI 216
>sp|C3MQ43|PSA_SULIL Proteasome subunit alpha OS=Sulfolobus islandicus (strain L.S.2.15
/ Lassen #1) GN=psmA PE=3 SV=1
Length = 241
Score = 186 bits (473), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 91/210 (43%), Positives = 137/210 (65%), Gaps = 5/210 (2%)
Query: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKI 67
YDR + FSP+G L+QV+YA EA+K G TAIG+K+K GVV+A EKR LL+ S+EK+
Sbjct: 10 YDRAITIFSPDGSLYQVDYAFEAVKKGWTAIGIKSKSGVVIASEKRKAQSLLDVDSIEKV 69
Query: 68 MEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGD 127
ID+H+GC+ +GL +D R L+++AR HR Y EP++++ T+++ D+ +
Sbjct: 70 FLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMY---T 126
Query: 128 EESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNKDL 187
+ RPFGV+L+IAG D++ P LY T+PSG + A AIG G A L++ Y +DL
Sbjct: 127 QHGGVRPFGVALVIAGIDKSVPKLYMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYKEDL 186
Query: 188 TLQEAETIALSILKQVME--EKVTPNNVDI 215
T+++ +AL L ++ EK+TPN V+I
Sbjct: 187 TIEDTILLALKALSATLKPNEKLTPNTVEI 216
>sp|C4KHD9|PSA_SULIK Proteasome subunit alpha OS=Sulfolobus islandicus (strain M.16.4 /
Kamchatka #3) GN=psmA PE=3 SV=1
Length = 241
Score = 186 bits (473), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 91/210 (43%), Positives = 137/210 (65%), Gaps = 5/210 (2%)
Query: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKI 67
YDR + FSP+G L+QV+YA EA+K G TAIG+K+K GVV+A EKR LL+ S+EK+
Sbjct: 10 YDRAITIFSPDGSLYQVDYAFEAVKKGWTAIGIKSKSGVVIASEKRKAQSLLDVDSIEKV 69
Query: 68 MEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGD 127
ID+H+GC+ +GL +D R L+++AR HR Y EP++++ T+++ D+ +
Sbjct: 70 FLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMY---T 126
Query: 128 EESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNKDL 187
+ RPFGV+L+IAG D++ P LY T+PSG + A AIG G A L++ Y +DL
Sbjct: 127 QHGGVRPFGVALVIAGIDKSVPKLYMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYKEDL 186
Query: 188 TLQEAETIALSILKQVME--EKVTPNNVDI 215
T+++ +AL L ++ EK+TPN V+I
Sbjct: 187 TIEDTILLALKALSATLKPNEKLTPNTVEI 216
>sp|C3N5R0|PSA_SULIA Proteasome subunit alpha OS=Sulfolobus islandicus (strain M.16.27)
GN=psmA PE=3 SV=1
Length = 241
Score = 186 bits (473), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 91/210 (43%), Positives = 137/210 (65%), Gaps = 5/210 (2%)
Query: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKI 67
YDR + FSP+G L+QV+YA EA+K G TAIG+K+K GVV+A EKR LL+ S+EK+
Sbjct: 10 YDRAITIFSPDGSLYQVDYAFEAVKKGWTAIGIKSKSGVVIASEKRKAQSLLDVDSIEKV 69
Query: 68 MEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGD 127
ID+H+GC+ +GL +D R L+++AR HR Y EP++++ T+++ D+ +
Sbjct: 70 FLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMY---T 126
Query: 128 EESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNKDL 187
+ RPFGV+L+IAG D++ P LY T+PSG + A AIG G A L++ Y +DL
Sbjct: 127 QHGGVRPFGVALVIAGIDKSVPKLYMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYKEDL 186
Query: 188 TLQEAETIALSILKQVME--EKVTPNNVDI 215
T+++ +AL L ++ EK+TPN V+I
Sbjct: 187 TIEDTILLALKALSATLKPNEKLTPNTVEI 216
>sp|Q3IPJ1|PSA_NATPD Proteasome subunit alpha OS=Natronomonas pharaonis (strain DSM 2160
/ ATCC 35678) GN=psmA PE=3 SV=1
Length = 255
Score = 186 bits (472), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 93/211 (44%), Positives = 141/211 (66%), Gaps = 3/211 (1%)
Query: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKI 67
YDRG+ FSP+GRL+QVEYA EA+K G+ +IG++T++GVVL V+KRI SPL+E +SVEKI
Sbjct: 10 YDRGITIFSPDGRLYQVEYAREAVKRGTASIGIRTEDGVVLVVDKRIRSPLMERTSVEKI 69
Query: 68 MEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGD 127
+ D+HIG A +G +ADAR L++ AR + Q ++ Y EP+ VE+ T+A+ D ++
Sbjct: 70 HKADDHIGIASAGHVADARQLIDFARRQAQVNQLRYDEPIGVETLTKAVTDHIQQY---T 126
Query: 128 EESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNKDL 187
+ +RPFGV+L+I G ++ P LY TDPSGT ++ A A+G+ L+E Y++ L
Sbjct: 127 QVGGARPFGVALIIGGIEDGEPRLYETDPSGTPYEWQALAVGADRGDIQEYLEEHYSESL 186
Query: 188 TLQEAETIALSILKQVMEEKVTPNNVDIARV 218
+ +AL L V ++ +TP + +A V
Sbjct: 187 DTEAGIGLALEALASVNDDSLTPEGIGLATV 217
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.131 0.364
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 84,496,849
Number of Sequences: 539616
Number of extensions: 3415086
Number of successful extensions: 8098
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 348
Number of HSP's successfully gapped in prelim test: 122
Number of HSP's that attempted gapping in prelim test: 7183
Number of HSP's gapped (non-prelim): 474
length of query: 237
length of database: 191,569,459
effective HSP length: 114
effective length of query: 123
effective length of database: 130,053,235
effective search space: 15996547905
effective search space used: 15996547905
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 59 (27.3 bits)