Query 026499
Match_columns 237
No_of_seqs 230 out of 1736
Neff 6.8
Searched_HMMs 29240
Date Mon Mar 25 15:02:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026499.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/026499hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1ayz_A UBC2, ubiquitin-conjuga 100.0 7.9E-44 2.7E-48 294.7 15.7 152 1-166 1-154 (169)
2 4gpr_A Ubiquitin-conjugating e 100.0 2E-43 6.7E-48 287.3 15.5 147 3-162 2-150 (151)
3 2aak_A UBC1, ubiquitin conjuga 100.0 4.3E-43 1.5E-47 285.5 15.4 149 1-163 1-151 (152)
4 2c2v_B Ubiquitin-conjugating e 100.0 1.8E-43 6.2E-48 288.4 11.9 146 5-163 5-152 (154)
5 1zdn_A Ubiquitin-conjugating e 100.0 4.4E-43 1.5E-47 287.2 13.9 146 3-161 11-158 (158)
6 1yh2_A HSPC150 protein similar 100.0 9.5E-43 3.3E-47 288.2 15.8 152 3-164 2-156 (169)
7 1z2u_A Ubiquitin-conjugating e 100.0 7.8E-43 2.7E-47 283.4 14.6 147 3-162 2-150 (150)
8 2ucz_A UBC7, ubiquitin conjuga 100.0 1.1E-42 3.8E-47 286.6 15.3 151 1-162 1-164 (165)
9 2ayv_A Ubiquitin-conjugating e 100.0 1.3E-42 4.4E-47 286.7 15.1 144 5-161 21-166 (166)
10 2e2c_A Ubiquitin conjugating e 100.0 1.8E-42 6.1E-47 283.0 15.3 146 4-163 8-155 (156)
11 2r0j_A Ubiquitin carrier prote 100.0 1.5E-42 5.3E-47 281.4 14.7 144 7-163 3-148 (149)
12 2c4o_A Ubiquitin-conjugating e 100.0 2.1E-42 7.3E-47 285.1 15.4 146 4-162 18-165 (165)
13 2f4w_A Ubiquitin-conjugating e 100.0 2.2E-42 7.4E-47 290.4 15.0 165 4-168 13-177 (187)
14 1jat_A Ubiquitin-conjugating e 100.0 7.5E-43 2.6E-47 285.0 11.7 147 5-164 5-153 (155)
15 2bep_A Ubiquitin-conjugating e 100.0 5E-42 1.7E-46 281.2 14.9 148 1-162 5-158 (159)
16 3h8k_A Ubiquitin-conjugating e 100.0 8.4E-42 2.9E-46 281.1 16.1 148 5-162 3-163 (164)
17 3rcz_B SUMO-conjugating enzyme 100.0 3.3E-42 1.1E-46 283.5 13.3 149 3-162 8-163 (163)
18 1fxt_A Ubiquitin-conjugating e 100.0 2.1E-42 7.3E-47 280.5 11.5 143 7-162 3-149 (149)
19 2gjd_A Ubiquitin-conjugating e 100.0 4.8E-42 1.6E-46 280.8 13.7 150 1-162 1-157 (157)
20 3bzh_A Ubiquitin-conjugating e 100.0 1.6E-41 5.6E-46 286.5 15.6 146 4-162 47-194 (194)
21 2f4z_A Tgtwinscan_2721 - E2 do 100.0 8.6E-42 2.9E-46 287.9 13.9 147 4-163 31-193 (193)
22 1i7k_A Ubiquitin-conjugating e 100.0 1E-41 3.5E-46 284.4 12.7 148 4-165 29-178 (179)
23 2grr_A Ubiquitin-conjugating e 100.0 1.3E-41 4.5E-46 279.3 13.0 150 1-162 4-160 (161)
24 3k9o_A Ubiquitin-conjugating e 100.0 1.9E-41 6.5E-46 287.5 14.4 169 1-183 2-179 (201)
25 2pwq_A Ubiquitin conjugating e 100.0 9.5E-42 3.2E-46 292.1 12.1 150 4-166 22-174 (216)
26 3rz3_A Ubiquitin-conjugating e 100.0 4.5E-41 1.5E-45 281.5 15.4 154 1-164 3-175 (183)
27 1wzv_A Ubiquitin-conjugating e 100.0 3.9E-41 1.3E-45 274.8 12.4 147 5-164 4-153 (155)
28 3fn1_B NEDD8-conjugating enzym 100.0 2.5E-40 8.5E-45 273.1 14.4 147 5-162 14-167 (167)
29 1yrv_A Ubiquitin-conjugating l 100.0 1E-40 3.4E-45 276.1 11.6 146 1-159 20-168 (169)
30 3e46_A Ubiquitin-conjugating e 100.0 3.2E-40 1.1E-44 288.5 15.2 151 1-165 54-210 (253)
31 2y9m_A Ubiquitin-conjugating e 100.0 9.4E-40 3.2E-44 271.0 15.8 149 1-162 3-168 (172)
32 2awf_A Ubiquitin-conjugating e 100.0 6.8E-40 2.3E-44 271.8 11.9 144 3-156 15-172 (172)
33 1tte_A Ubiquitin-conjugating e 100.0 1.3E-40 4.3E-45 285.0 7.6 146 6-164 3-152 (215)
34 2z5d_A Ubiquitin-conjugating e 100.0 3E-40 1E-44 275.4 9.1 149 1-166 20-173 (179)
35 2onu_A Ubiquitin-conjugating e 100.0 2.3E-40 8E-45 269.5 6.6 144 5-164 2-149 (152)
36 1c4z_D UBCH7, ubiquitin conjug 100.0 5.1E-40 1.8E-44 267.9 7.8 146 6-164 3-151 (154)
37 1y8x_A Ubiquitin-conjugating e 100.0 9.4E-39 3.2E-43 262.1 13.5 140 5-160 6-148 (160)
38 1yf9_A Ubiquitin carrier prote 100.0 3.9E-39 1.3E-43 267.0 9.9 147 5-168 12-162 (171)
39 4ddg_A Ubiquitin-conjugating e 100.0 3.3E-38 1.1E-42 292.3 15.6 149 5-166 3-153 (399)
40 2nvu_C NEDD8-conjugating enzym 100.0 2.1E-38 7.2E-43 264.6 12.4 141 4-160 25-168 (180)
41 3o2u_A NEDD8-conjugating enzym 100.0 1.4E-37 4.7E-42 261.7 11.3 142 4-161 28-178 (190)
42 2fo3_A Ubiquitin-conjugating e 100.0 1.7E-36 5.7E-41 239.2 11.1 114 5-121 6-122 (125)
43 4ds2_A Ubiquitin-conjugating e 100.0 1.3E-36 4.3E-41 251.0 7.7 140 1-154 5-163 (167)
44 2h2y_A Ubiquitin-conjugating e 100.0 1.8E-35 6.1E-40 236.6 12.2 113 5-120 20-135 (136)
45 3ceg_A Baculoviral IAP repeat- 100.0 1.4E-35 4.9E-40 266.4 12.9 156 3-166 74-247 (323)
46 2a7l_A Hypothetical ubiquitin- 100.0 5.8E-35 2E-39 233.6 9.1 111 1-116 20-136 (136)
47 2q0v_A Ubiquitin-conjugating e 100.0 8.4E-35 2.9E-39 237.7 9.3 122 5-131 21-151 (156)
48 1jat_B Ubiquitin-conjugating e 100.0 4.2E-35 1.4E-39 234.9 7.2 125 1-130 2-135 (138)
49 2a4d_A Ubiquitin-conjugating e 100.0 2.4E-34 8.2E-39 235.8 10.7 125 4-130 24-156 (160)
50 1zuo_A Hypothetical protein LO 100.0 2.5E-34 8.7E-39 241.0 5.7 139 3-161 25-181 (186)
51 2hlw_A Ubiquitin-conjugating e 100.0 7.9E-34 2.7E-38 234.9 6.9 124 5-130 35-166 (170)
52 2z6o_A UFM1-conjugating enzyme 99.9 1.7E-25 5.8E-30 182.2 1.1 97 4-108 31-143 (172)
53 3kpa_A Probable ubiquitin fold 99.7 3.2E-18 1.1E-22 136.7 1.5 87 4-102 33-132 (168)
54 3r3q_A Suppressor protein STP2 99.7 6.3E-17 2.2E-21 132.3 7.5 112 7-122 30-161 (162)
55 3obq_A Tumor susceptibility ge 99.2 3.5E-12 1.2E-16 102.5 4.2 81 31-120 50-141 (146)
56 2ebm_A RWD domain-containing p 95.6 0.042 1.5E-06 41.8 7.5 68 6-75 11-78 (128)
57 2yz0_A Serine/threonine-protei 95.0 0.2 6.7E-06 38.6 9.7 69 6-75 11-85 (138)
58 2day_A Ring finger protein 25; 94.8 0.13 4.3E-06 39.1 8.1 68 8-75 11-82 (128)
59 3zqs_A E3 ubiquitin-protein li 92.6 0.31 1.1E-05 40.1 7.0 83 9-116 5-87 (186)
60 2ebk_A RWD domain-containing p 91.1 0.45 1.5E-05 36.0 6.0 66 9-75 11-79 (128)
61 1ukx_A GCN2, GCN2 EIF2alpha ki 90.8 1.2 4.2E-05 33.8 8.3 67 7-74 12-85 (137)
62 2daw_A RWD domain containing p 88.5 1.4 4.8E-05 34.6 7.1 67 5-75 14-98 (154)
63 2dax_A Protein C21ORF6; RWD do 86.6 0.88 3E-05 35.6 4.9 23 53-75 74-96 (152)
64 3u3c_B Paxillin LD2 peptide; 4 44.1 22 0.00074 19.1 2.6 21 5-25 5-25 (26)
65 1cn3_F Fragment of coat protei 43.0 4.3 0.00015 22.4 -0.3 15 213-227 15-29 (29)
66 3rls_A YAF9, protein AF-9 homo 30.4 93 0.0032 24.9 5.6 49 32-82 30-78 (175)
67 3qrl_A Transcription initiatio 27.1 1E+02 0.0035 23.8 5.1 42 34-77 32-76 (140)
68 1skh_A Major prion protein 2; 24.5 53 0.0018 18.6 2.2 14 214-227 6-19 (30)
69 3hd7_B Syntaxin-1A; membrane p 22.6 31 0.0011 25.2 1.3 19 214-232 84-102 (109)
70 2ccv_A Helix pomatia agglutini 20.9 81 0.0028 22.7 3.3 23 52-75 29-51 (101)
No 1
>1ayz_A UBC2, ubiquitin-conjugating enzyme RAD6; ubiquitin conjugation; 2.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=100.00 E-value=7.9e-44 Score=294.74 Aligned_cols=152 Identities=26% Similarity=0.561 Sum_probs=139.3
Q ss_pred CCcHHHHHHHHHHHHHHhhCCCCCEEEEeCCCCceeEEEEEEcCCCCCCCCcEEEEEEECCCCCCCCCCceeecCC--Cc
Q 026499 1 MAEKACVKRLQKEYRALCKEPVSHVVARPSPNDILEWHYVLEGSNGTPFAGGYYYGKIKFPPEYPYKPPGILMITP--NG 78 (237)
Q Consensus 1 Mas~~~~kRL~kE~~~l~~~~~~gi~v~p~~~nl~~W~~~i~GP~gTpYegG~f~~~i~fP~~YP~~pP~v~F~tP--n~ 78 (237)
|++ .+.+||++|+++|++++++||++.+.++|+++|+++|.||+||||+||+|+|+|.||++||++||+|+|.|+ |+
T Consensus 1 Ms~-~a~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~tpYegG~f~l~i~fp~~YP~~PP~v~F~t~i~HP 79 (169)
T 1ayz_A 1 MST-PARRRLMRDFKRMKEDAPPGVSASPLPDNVMVWNAMIIGPADTPYEDGTFRLLLEFDEEYPNKPPHVKFLSEMFHP 79 (169)
T ss_dssp -CC-HHHHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCT
T ss_pred CCh-HHHHHHHHHHHHHHhCCCCCEEEEecCCccccceEEEECCCCCCcCCCEEEEEEECcccCCCCCCccccccCCccC
Confidence 776 678999999999999999999999999999999999999999999999999999999999999999999994 34
Q ss_pred eecCCceEeeccCCCCCCCCCCccchhhhhhhhccccccCCCCCCCCCChHHHHHHHHHHHHHhccChHHHHHHHHHHHH
Q 026499 79 RFMTQKKLCLSMSDFHPESWNPMWSVSSILTGLLSFMMDTSPTTGSVNTTTEEKQRLAKASLAFNCKNPAFRKLFPEYVE 158 (237)
Q Consensus 79 ~v~~~G~ICl~iL~~~~~~WsP~~~i~~vL~~I~~lL~~pnp~~~~~~~~~a~~~~la~~s~~~~~~~~~f~~~~r~~v~ 158 (237)
+|+.+|+||+++|+ ++|+|+++|.+||++|++||.+|||+++ +|..+|. +|.++++.|.++||+||+
T Consensus 80 NI~~~G~ICl~iL~---~~WsP~~~i~~vL~si~~ll~~Pn~~~P-~n~~aa~---------~~~~d~~~y~~~~r~~~~ 146 (169)
T 1ayz_A 80 NVYANGEICLDILQ---NRWTPTYDVASILTSIQSLFNDPNPASP-ANVEAAT---------LFKDHKSQYVKRVKETVE 146 (169)
T ss_dssp TBCTTSBBCCGGGT---TTCCTTCCHHHHHHHHHHHHTCCCCSSC-SSHHHHH---------HHHHCHHHHHHHHHHHHH
T ss_pred CCCCCCeEeehhhc---cCCCCcCcHHHHHHHHHHHHhCCCCCcH-HHHHHHH---------HHHHCHHHHHHHHHHHHH
Confidence 47889999999997 8999999999999999999999999997 5655553 788999999999999999
Q ss_pred HHhhhhhH
Q 026499 159 KYNEQQLA 166 (237)
Q Consensus 159 k~a~~~~~ 166 (237)
+|+.....
T Consensus 147 ~~a~~~~~ 154 (169)
T 1ayz_A 147 KSWEDDMD 154 (169)
T ss_dssp HHHHHHTC
T ss_pred HHcCCCcc
Confidence 99986654
No 2
>4gpr_A Ubiquitin-conjugating enzyme family protein; ubiquitin conjugation, EHU ehring1, thiol esterification, ligase; 1.60A {Entamoeba histolytica}
Probab=100.00 E-value=2e-43 Score=287.29 Aligned_cols=147 Identities=23% Similarity=0.612 Sum_probs=137.2
Q ss_pred cHHHHHHHHHHHHHHhhCCCCCEEEEeCCCCceeEEEEEEcCCCCCCCCcEEEEEEECCCCCCCCCCceeecCC--Ccee
Q 026499 3 EKACVKRLQKEYRALCKEPVSHVVARPSPNDILEWHYVLEGSNGTPFAGGYYYGKIKFPPEYPYKPPGILMITP--NGRF 80 (237)
Q Consensus 3 s~~~~kRL~kE~~~l~~~~~~gi~v~p~~~nl~~W~~~i~GP~gTpYegG~f~~~i~fP~~YP~~pP~v~F~tP--n~~v 80 (237)
+..+.+||++|+++|+++++.||++.+.++|+++|+++|.||+||||+||+|+++|.||++||++||+|+|.|| |++|
T Consensus 2 a~~a~~RL~kEl~~l~~~~~~~i~~~p~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv 81 (151)
T 4gpr_A 2 AAMAMRRIQKELREIQQDPPCNCSAGPVGDDIFHWTATITGPDDSPYQGGLFFLDVHFPVDYPFKAPRVTFMTKVYHPNI 81 (151)
T ss_dssp CHHHHHHHHHHHHHHHHSCCTTEEEEESSSCTTEEEEEEECCSSSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTB
T ss_pred chHHHHHHHHHHHHHHhCCCCCEEEEEcCCCceEEEEEEeCCCCCCcCCCEEEEEEECCCCCCCCcceeEEecCcccceE
Confidence 45788999999999999999999999999999999999999999999999999999999999999999999995 4448
Q ss_pred cCCceEeeccCCCCCCCCCCccchhhhhhhhccccccCCCCCCCCCChHHHHHHHHHHHHHhccChHHHHHHHHHHHHHH
Q 026499 81 MTQKKLCLSMSDFHPESWNPMWSVSSILTGLLSFMMDTSPTTGSVNTTTEEKQRLAKASLAFNCKNPAFRKLFPEYVEKY 160 (237)
Q Consensus 81 ~~~G~ICl~iL~~~~~~WsP~~~i~~vL~~I~~lL~~pnp~~~~~~~~~a~~~~la~~s~~~~~~~~~f~~~~r~~v~k~ 160 (237)
+.+|+||+++|+ ++|+|+++|.+||++|++||.+|||+++ +|.++|+ +|.+|++.|.++||+||++|
T Consensus 82 ~~~G~iCl~iL~---~~W~p~~~i~~vl~~i~~ll~~p~~~~p-~n~~aa~---------~~~~d~~~f~~~ar~~~~~y 148 (151)
T 4gpr_A 82 NKNGVICLDILK---DQWSPALTLSRVLLSISSLLTDPNPSDP-LDPEVAN---------VLRANKKQFEDTAREWTRMY 148 (151)
T ss_dssp CTTCBBCCGGGT---TTCCTTCCHHHHHHHHHHHHHCCCTTSC-SSHHHHH---------HHHHCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEccccc---CCCCCCCcHHHHHHHHHHHhcCCCCCCc-hhHHHHH---------HHHHCHHHHHHHHHHHHHHh
Confidence 899999999997 8999999999999999999999999997 6666654 78899999999999999999
Q ss_pred hh
Q 026499 161 NE 162 (237)
Q Consensus 161 a~ 162 (237)
|.
T Consensus 149 a~ 150 (151)
T 4gpr_A 149 AR 150 (151)
T ss_dssp CC
T ss_pred cC
Confidence 86
No 3
>2aak_A UBC1, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase; 2.40A {Arabidopsis thaliana} SCOP: d.20.1.1 PDB: 1jas_A 2y4w_A 2yb6_A 2ybf_A 1q34_A 1z3d_A
Probab=100.00 E-value=4.3e-43 Score=285.54 Aligned_cols=149 Identities=24% Similarity=0.594 Sum_probs=137.2
Q ss_pred CCcHHHHHHHHHHHHHHhhCCCCCEEEEeCCCCceeEEEEEEcCCCCCCCCcEEEEEEECCCCCCCCCCceeecCC--Cc
Q 026499 1 MAEKACVKRLQKEYRALCKEPVSHVVARPSPNDILEWHYVLEGSNGTPFAGGYYYGKIKFPPEYPYKPPGILMITP--NG 78 (237)
Q Consensus 1 Mas~~~~kRL~kE~~~l~~~~~~gi~v~p~~~nl~~W~~~i~GP~gTpYegG~f~~~i~fP~~YP~~pP~v~F~tP--n~ 78 (237)
|++ .+.+||++|+++|++++++||++.+.++|+++|+++|.||+||||+||+|+++|.||++||++||+|+|.|+ |+
T Consensus 1 Ms~-~a~~RL~~E~~~l~~~~~~~i~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HP 79 (152)
T 2aak_A 1 MST-PARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMFHP 79 (152)
T ss_dssp CCC-HHHHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCT
T ss_pred CCh-HHHHHHHHHHHHHHhCCCCCEEEEeCCCCccEEEEEEeCCCCCCccCCEEEEEEECCCCCCCCCCEEEEecCcccC
Confidence 776 678999999999999999999999999999999999999999999999999999999999999999999994 34
Q ss_pred eecCCceEeeccCCCCCCCCCCccchhhhhhhhccccccCCCCCCCCCChHHHHHHHHHHHHHhccChHHHHHHHHHHHH
Q 026499 79 RFMTQKKLCLSMSDFHPESWNPMWSVSSILTGLLSFMMDTSPTTGSVNTTTEEKQRLAKASLAFNCKNPAFRKLFPEYVE 158 (237)
Q Consensus 79 ~v~~~G~ICl~iL~~~~~~WsP~~~i~~vL~~I~~lL~~pnp~~~~~~~~~a~~~~la~~s~~~~~~~~~f~~~~r~~v~ 158 (237)
+|+.+|+||+++|+ ++|+|+++|.+||++|++||.+||++++ +|.++|. +|.+|++.|.++||+||+
T Consensus 80 nv~~~G~iCl~iL~---~~W~p~~~i~~vl~~i~~ll~~p~~~~p-~n~~aa~---------~~~~~~~~y~~~~~~~~~ 146 (152)
T 2aak_A 80 NIYADGSICLDILQ---NQWSPIYDVAAILTSIQSLLCDPNPNSP-ANSEAAR---------MYSESKREYNRRVRDVVE 146 (152)
T ss_dssp TBCTTSBBCCGGGT---TSCCTTCCHHHHHHHHHHHHTSCCTTSC-SSHHHHH---------HHHHCHHHHHHHHHHHHH
T ss_pred CCCCCCEEechhhc---CCCCCCCcHHHHHHHHHHHHhCCCCCcc-ccHHHHH---------HHHHCHHHHHHHHHHHHH
Confidence 47889999999997 8999999999999999999999999987 5655553 788999999999999999
Q ss_pred HHhhh
Q 026499 159 KYNEQ 163 (237)
Q Consensus 159 k~a~~ 163 (237)
+||.+
T Consensus 147 ~~a~~ 151 (152)
T 2aak_A 147 QSWTA 151 (152)
T ss_dssp HHCC-
T ss_pred HHccc
Confidence 99864
No 4
>2c2v_B Ubiquitin-conjugating enzyme E2 N; chaperone, heat-shock protein complex, E3 ligase, ubiquitiny TPR, heat-shock protein; 2.9A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=1.8e-43 Score=288.40 Aligned_cols=146 Identities=21% Similarity=0.463 Sum_probs=134.9
Q ss_pred HHHHHHHHHHHHHhhCCCCCEEEEeCCCCceeEEEEEEcCCCCCCCCcEEEEEEECCCCCCCCCCceeecCC--CceecC
Q 026499 5 ACVKRLQKEYRALCKEPVSHVVARPSPNDILEWHYVLEGSNGTPFAGGYYYGKIKFPPEYPYKPPGILMITP--NGRFMT 82 (237)
Q Consensus 5 ~~~kRL~kE~~~l~~~~~~gi~v~p~~~nl~~W~~~i~GP~gTpYegG~f~~~i~fP~~YP~~pP~v~F~tP--n~~v~~ 82 (237)
.+.+||++|+++|++++++||++.+.++|+++|+++|.||+||||+||+|+++|.||++||++||+|+|.|| |++|+.
T Consensus 5 ~~~~RL~kEl~~l~~~~~~~i~~~~~~~~l~~w~~~i~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~ 84 (154)
T 2c2v_B 5 GLPRRIIKETQRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDK 84 (154)
T ss_dssp SCCHHHHHHHHHHHHSCCTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCCTTBCT
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEECCCchheEEEEEECCCCCCcCCCeEEEEEEcCCCCCCCCCEEEeecCcccCcCcc
Confidence 667999999999999999999999999999999999999999999999999999999999999999999994 344788
Q ss_pred CceEeeccCCCCCCCCCCccchhhhhhhhccccccCCCCCCCCCChHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHhh
Q 026499 83 QKKLCLSMSDFHPESWNPMWSVSSILTGLLSFMMDTSPTTGSVNTTTEEKQRLAKASLAFNCKNPAFRKLFPEYVEKYNE 162 (237)
Q Consensus 83 ~G~ICl~iL~~~~~~WsP~~~i~~vL~~I~~lL~~pnp~~~~~~~~~a~~~~la~~s~~~~~~~~~f~~~~r~~v~k~a~ 162 (237)
+|+||+++|+ ++|+|+++|.+||++|++||.+|||+++ +|.++|. +|.+|++.|.++||+||++||.
T Consensus 85 ~G~iCl~iL~---~~W~p~~~i~~vl~~i~~ll~~pn~~~p-~n~~aa~---------~~~~d~~~f~~~ar~~~~~~a~ 151 (154)
T 2c2v_B 85 LGRICLDILK---DKWSPALQIRTVLLSIQALLSAPNPDDP-LANDVAE---------QWKTNEAQAIETARAWTRLYAM 151 (154)
T ss_dssp TCBBCCHHHH---TSCCTTCCHHHHHHHHHHHTTSCCCCCC---CHHHH---------HHHHHHHHHHHHHHHHHHHHSS
T ss_pred CCeEEchhcc---CCCCCCCcHHHHHHHHHHHHhCCCCCCc-ccHHHHH---------HHHHCHHHHHHHHHHHHHHhcC
Confidence 9999999997 8999999999999999999999999997 6666664 7889999999999999999996
Q ss_pred h
Q 026499 163 Q 163 (237)
Q Consensus 163 ~ 163 (237)
.
T Consensus 152 ~ 152 (154)
T 2c2v_B 152 N 152 (154)
T ss_dssp C
T ss_pred C
Confidence 4
No 5
>1zdn_A Ubiquitin-conjugating enzyme E2S; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC; 1.93A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=4.4e-43 Score=287.23 Aligned_cols=146 Identities=17% Similarity=0.383 Sum_probs=135.7
Q ss_pred cHHHHHHHHHHHHHHhhCCCCCEEEEeCCCCceeEEEEEEcCCCCCCCCcEEEEEEECCCCCCCCCCceeecCC--Ccee
Q 026499 3 EKACVKRLQKEYRALCKEPVSHVVARPSPNDILEWHYVLEGSNGTPFAGGYYYGKIKFPPEYPYKPPGILMITP--NGRF 80 (237)
Q Consensus 3 s~~~~kRL~kE~~~l~~~~~~gi~v~p~~~nl~~W~~~i~GP~gTpYegG~f~~~i~fP~~YP~~pP~v~F~tP--n~~v 80 (237)
+..+.+||++|+++|++++++||++.++++|+++|+++|.||+||||+||+|+++|.||++||++||+|+|.|| |++|
T Consensus 11 s~~~~~RL~kEl~~l~~~~~~gi~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv 90 (158)
T 1zdn_A 11 PPHIIRLVYKEVTTLTADPPDGIKVFPNEEDLTDLQVTIEGPEGTPYAGGLFRMKLLLGKDFPASPPKGYFLTKIFHPNV 90 (158)
T ss_dssp CHHHHHHHHHHHHHHHHSCCTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTTB
T ss_pred CHHHHHHHHHHHHHHHhCCCCCEEEEECCCChhheeEEEECCCCCCccCcEEEEEEEcCCCCCCCCCEEEeccCcccCCC
Confidence 34788999999999999999999999999999999999999999999999999999999999999999999995 4447
Q ss_pred cCCceEeeccCCCCCCCCCCccchhhhhhhhccccccCCCCCCCCCChHHHHHHHHHHHHHhccChHHHHHHHHHHHHHH
Q 026499 81 MTQKKLCLSMSDFHPESWNPMWSVSSILTGLLSFMMDTSPTTGSVNTTTEEKQRLAKASLAFNCKNPAFRKLFPEYVEKY 160 (237)
Q Consensus 81 ~~~G~ICl~iL~~~~~~WsP~~~i~~vL~~I~~lL~~pnp~~~~~~~~~a~~~~la~~s~~~~~~~~~f~~~~r~~v~k~ 160 (237)
+.+|+||+++|+ ++|+|+++|.+||++|++||.+|||+++ +|.++|+ +|.+|++.|.++||+||++|
T Consensus 91 ~~~G~iCl~iL~---~~W~p~~~i~~vL~~i~~ll~~pn~~~p-~n~~aa~---------~~~~d~~~f~~~a~~~t~~~ 157 (158)
T 1zdn_A 91 GANGEICVNVLK---RDWTAELGIRHVLLTIKCLLIHPNPESA-LNEEAGR---------LLLENYEEYAARARLLTEIH 157 (158)
T ss_dssp CTTSBBCHHHHT---TTCCTTCCHHHHHHHHHHHHHSCCGGGC-SSHHHHH---------HHHHCHHHHHHHHHHHHHHH
T ss_pred CCCCEEehhhcC---CCCCCCCcHHHHHHHHHHHHhCCCCCCc-ccHHHHH---------HHHHCHHHHHHHHHHHHHHh
Confidence 889999999997 8999999999999999999999999987 6656554 78899999999999999999
Q ss_pred h
Q 026499 161 N 161 (237)
Q Consensus 161 a 161 (237)
|
T Consensus 158 A 158 (158)
T 1zdn_A 158 G 158 (158)
T ss_dssp C
T ss_pred C
Confidence 7
No 6
>1yh2_A HSPC150 protein similar to ubiquitin-conjugating enzyme; structural genomics consortium, HSCP150, ligase, SGC; 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=9.5e-43 Score=288.20 Aligned_cols=152 Identities=23% Similarity=0.506 Sum_probs=139.5
Q ss_pred cHHHHHHHHHHHHHHhhCCCCCEEEEeCCCCceeEEEEEEcCCCCCCCCcEEEEEEECCCCCCCCCCceeecCC--Ccee
Q 026499 3 EKACVKRLQKEYRALCKEPVSHVVARPSPNDILEWHYVLEGSNGTPFAGGYYYGKIKFPPEYPYKPPGILMITP--NGRF 80 (237)
Q Consensus 3 s~~~~kRL~kE~~~l~~~~~~gi~v~p~~~nl~~W~~~i~GP~gTpYegG~f~~~i~fP~~YP~~pP~v~F~tP--n~~v 80 (237)
|.++.+||++|+++|+++++.||++.+.++|+++|+++|.||+||||+||+|+++|.||++||++||+|+|.|| |++|
T Consensus 2 s~~~~~RL~kEl~~l~~~~~~gi~~~~~~~~l~~w~~~I~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPNv 81 (169)
T 1yh2_A 2 SMQRASRLKRELHMLATEPPPGITCWQDKDQMDDLRAQILGGANTPYEKGVFKLEVIIPERYPFEPPQIRFLTPIYHPNI 81 (169)
T ss_dssp CHHHHHHHHHHHHHHHHSCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTB
T ss_pred chHHHHHHHHHHHHHHhCCCCCEEEEeCCCchheEEEEEECCCCCCccCCEEEEEEEeCCCCCCCCcEEEeecCCccccC
Confidence 45789999999999999999999999999999999999999999999999999999999999999999999995 3447
Q ss_pred cCCceEeeccCCCCC-CCCCCccchhhhhhhhccccccCCCCCCCCCChHHHHHHHHHHHHHhccChHHHHHHHHHHHHH
Q 026499 81 MTQKKLCLSMSDFHP-ESWNPMWSVSSILTGLLSFMMDTSPTTGSVNTTTEEKQRLAKASLAFNCKNPAFRKLFPEYVEK 159 (237)
Q Consensus 81 ~~~G~ICl~iL~~~~-~~WsP~~~i~~vL~~I~~lL~~pnp~~~~~~~~~a~~~~la~~s~~~~~~~~~f~~~~r~~v~k 159 (237)
+.+|+||+++|+++. ++|+|+++|.+||++|++||.+|||+++ +|.++|. +|.+|++.|.++||+||++
T Consensus 82 ~~~G~iCl~iL~~~~~~~W~p~~~i~~vL~si~~ll~~p~~~~p-~n~~aa~---------~~~~~~~~y~~~~r~~~~~ 151 (169)
T 1yh2_A 82 DSAGRICLDVLKLPPKGAWRPSLNIATVLTSIQLLMSEPNPDDP-LMADISS---------EFKYNKPAFLKNARQWTEK 151 (169)
T ss_dssp CTTCBBCCGGGSCTTTSCCCTTSCHHHHHHHHHHHHHSCCTTSC-SCHHHHH---------HHHHCHHHHHHHHHHHHHH
T ss_pred CcCCeEecccccCCcccCCCCCCcHHHHHHHHHHHHhCCCCcch-HhHHHHH---------HHHhhHHHHHHHHHHHHHH
Confidence 899999999997554 7899999999999999999999999987 6666554 7888999999999999999
Q ss_pred Hhhhh
Q 026499 160 YNEQQ 164 (237)
Q Consensus 160 ~a~~~ 164 (237)
||...
T Consensus 152 ~a~~~ 156 (169)
T 1yh2_A 152 HARQK 156 (169)
T ss_dssp HSCCC
T ss_pred Hcccc
Confidence 99753
No 7
>1z2u_A Ubiquitin-conjugating enzyme E2 2; PSI, secsg, proteosome pathway, structural genomics, protein structure initiative; 1.10A {Caenorhabditis elegans} SCOP: d.20.1.1 PDB: 3tgd_A 2esk_A 1ur6_A 1w4u_A 4a49_B* 4a4b_C* 4a4c_C* 3eb6_B 3l1y_A 2esp_A 2eso_A 2esq_A 3l1z_A 2oxq_A 3a33_A 4ddg_D 4ddi_D 1x23_A 3rpg_A 2fuh_A ...
Probab=100.00 E-value=7.8e-43 Score=283.39 Aligned_cols=147 Identities=25% Similarity=0.623 Sum_probs=136.3
Q ss_pred cHHHHHHHHHHHHHHhhCCCCCEEEEeCCCCceeEEEEEEcCCCCCCCCcEEEEEEECCCCCCCCCCceeecCC--Ccee
Q 026499 3 EKACVKRLQKEYRALCKEPVSHVVARPSPNDILEWHYVLEGSNGTPFAGGYYYGKIKFPPEYPYKPPGILMITP--NGRF 80 (237)
Q Consensus 3 s~~~~kRL~kE~~~l~~~~~~gi~v~p~~~nl~~W~~~i~GP~gTpYegG~f~~~i~fP~~YP~~pP~v~F~tP--n~~v 80 (237)
|..+.+||++|+++|++++++||++.+.++|+++|+++|.||+||||+||+|+++|.||++||++||+|+|.|| |++|
T Consensus 2 s~~~~~RL~kEl~~l~~~~~~~~~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv 81 (150)
T 1z2u_A 2 SHMALKRIQKELQDLGRDPPAQCSAGPVGDDLFHWQATIMGPPESPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNI 81 (150)
T ss_dssp CCHHHHHHHHHHHHHHHSCCSSEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTB
T ss_pred chHHHHHHHHHHHHHHhCCCCCEEEEECCCcceEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCcEEEEecCcccCcC
Confidence 34678999999999999999999999999999999999999999999999999999999999999999999995 5558
Q ss_pred cCCceEeeccCCCCCCCCCCccchhhhhhhhccccccCCCCCCCCCChHHHHHHHHHHHHHhccChHHHHHHHHHHHHHH
Q 026499 81 MTQKKLCLSMSDFHPESWNPMWSVSSILTGLLSFMMDTSPTTGSVNTTTEEKQRLAKASLAFNCKNPAFRKLFPEYVEKY 160 (237)
Q Consensus 81 ~~~G~ICl~iL~~~~~~WsP~~~i~~vL~~I~~lL~~pnp~~~~~~~~~a~~~~la~~s~~~~~~~~~f~~~~r~~v~k~ 160 (237)
+.+|+||+++|+ ++|+|+++|.+||++|++||.+|||+++ +|.++|+ +|.+|++.|.++||+||++|
T Consensus 82 ~~~G~iCl~iL~---~~W~p~~~i~~vl~~i~~ll~~pn~~~p-~n~~aa~---------~~~~~~~~f~~~~~~~~~~~ 148 (150)
T 1z2u_A 82 NSNGSICLDILR---SQWSPALTISKVLLSICSLLCDPNPDDP-LVPEIAR---------IYKTDRERYNQLAREWTQKY 148 (150)
T ss_dssp CTTCBBCCGGGT---TTCCTTCCHHHHHHHHHHHHHSCCTTSC-SCHHHHH---------HHHHCHHHHHHHHHHHHHHH
T ss_pred CCCCeEeecccc---CCCCCCCCHHHHHHHHHHHhhCCCCCCc-cCHHHHH---------HHHHHHHHHHHHHHHHHHHH
Confidence 899999999997 8999999999999999999999999987 5655553 78889999999999999999
Q ss_pred hh
Q 026499 161 NE 162 (237)
Q Consensus 161 a~ 162 (237)
|.
T Consensus 149 a~ 150 (150)
T 1z2u_A 149 AM 150 (150)
T ss_dssp CC
T ss_pred hC
Confidence 84
No 8
>2ucz_A UBC7, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase, yeast; 2.93A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=100.00 E-value=1.1e-42 Score=286.64 Aligned_cols=151 Identities=27% Similarity=0.547 Sum_probs=136.2
Q ss_pred CCcHHHHHHHHHHHHHHhhCCCCCEEEEeCC-CCceeEEEEEEcCCCCCCCCcEEEEEEECCCCCCCCCCceeecCC--C
Q 026499 1 MAEKACVKRLQKEYRALCKEPVSHVVARPSP-NDILEWHYVLEGSNGTPFAGGYYYGKIKFPPEYPYKPPGILMITP--N 77 (237)
Q Consensus 1 Mas~~~~kRL~kE~~~l~~~~~~gi~v~p~~-~nl~~W~~~i~GP~gTpYegG~f~~~i~fP~~YP~~pP~v~F~tP--n 77 (237)
||+ .+.+||++|+++|++++++||++.+.+ +|+++|+++|.||+||||+||+|+++|.||++||++||+|+|.|| |
T Consensus 1 M~~-~a~~RL~kEl~~l~~~~~~gi~~~~~~~~~l~~w~~~i~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~H 79 (165)
T 2ucz_A 1 MSK-TAQKRLLKELQQLIKDSPPGIVAGPKSENNIFIWDCLIQGPPDTPYADGVFNAKLEFPKDYPLSPPKLTFTPSILH 79 (165)
T ss_dssp -CH-HHHHHHHHHHHHHHHSCCTTEEEEESSSSCCSEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCSC
T ss_pred CCh-HHHHHHHHHHHHHHhCCCCCEEEEECCCCCccEEEEEEECCCCCCccCcEEEEEEECCccCCCCCCEEEEeCCCcc
Confidence 886 788999999999999999999999875 799999999999999999999999999999999999999999995 3
Q ss_pred ceecCCceEeeccCCCC----------CCCCCCccchhhhhhhhccccccCCCCCCCCCChHHHHHHHHHHHHHhccChH
Q 026499 78 GRFMTQKKLCLSMSDFH----------PESWNPMWSVSSILTGLLSFMMDTSPTTGSVNTTTEEKQRLAKASLAFNCKNP 147 (237)
Q Consensus 78 ~~v~~~G~ICl~iL~~~----------~~~WsP~~~i~~vL~~I~~lL~~pnp~~~~~~~~~a~~~~la~~s~~~~~~~~ 147 (237)
++|+.+|+||+++|+.. .++|+|+++|.+||++|++||.+||++++ +|.++|. +|++|++
T Consensus 80 PNv~~~G~iCl~iL~~~~~~~~~~~~~~~~W~p~~~i~~vL~si~~ll~~Pn~~~p-~n~~aa~---------~~~~~~~ 149 (165)
T 2ucz_A 80 PNIYPNGEVCISILHSPGDDPNMYELAEERWSPVQSVEKILLSVMSMLSEPNIESG-ANIDACI---------LWRDNRP 149 (165)
T ss_dssp TTBCTTSBBCCGGGSCCCSCTTSTTTTTTSCCTTCCHHHHHHHHHHHHHSCCGGGC-CCHHHHH---------HHHTTHH
T ss_pred CCCCCCCcEeehhhCCccccccccCCCCCCCCCcCcHHHHHHHHHHHHhCCCCCCc-hhHHHHH---------HHHHCHH
Confidence 44889999999999421 48999999999999999999999999987 5655553 8899999
Q ss_pred HHHHHHHHHHHHHhh
Q 026499 148 AFRKLFPEYVEKYNE 162 (237)
Q Consensus 148 ~f~~~~r~~v~k~a~ 162 (237)
.|.++||+||++|+.
T Consensus 150 ~y~~~v~~~~~~~~~ 164 (165)
T 2ucz_A 150 EFERQVKLSILKSLG 164 (165)
T ss_dssp HHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhh
Confidence 999999999999875
No 9
>2ayv_A Ubiquitin-conjugating enzyme E2; structural genomics, structural genomics consortium, ubiquit ubiquitin-conjugating enzyme, SGC, ligase; 2.00A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=100.00 E-value=1.3e-42 Score=286.72 Aligned_cols=144 Identities=26% Similarity=0.639 Sum_probs=134.4
Q ss_pred HHHHHHHHHHHHHhhCCCCCEEEEeCCCCceeEEEEEEcCCCCCCCCcEEEEEEECCCCCCCCCCceeecCC--CceecC
Q 026499 5 ACVKRLQKEYRALCKEPVSHVVARPSPNDILEWHYVLEGSNGTPFAGGYYYGKIKFPPEYPYKPPGILMITP--NGRFMT 82 (237)
Q Consensus 5 ~~~kRL~kE~~~l~~~~~~gi~v~p~~~nl~~W~~~i~GP~gTpYegG~f~~~i~fP~~YP~~pP~v~F~tP--n~~v~~ 82 (237)
.+.+||++|+++|+++++.||++.+.++|+++|+++|.||+||||+||+|+++|.||++||++||+|+|.|| |++|+.
T Consensus 21 ~~~~RL~kEl~~l~~~~~~gi~~~~~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNI~~ 100 (166)
T 2ayv_A 21 GALKRINKELNDLSKDPPTNCSAGPVGDDMFHWQATIMGPEDSPYSGGVFFLNIHFPSDYPFKPPKVNFTTKIYHPNINS 100 (166)
T ss_dssp THHHHHHHHHHHHHHSCCTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCBTTBCT
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEEcCCCcceeeEEEECCCCCCcCCCEEEEEEeCCCcCCCCCceeeeccCCcCCcCCC
Confidence 578999999999999999999999999999999999999999999999999999999999999999999995 334788
Q ss_pred CceEeeccCCCCCCCCCCccchhhhhhhhccccccCCCCCCCCCChHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHh
Q 026499 83 QKKLCLSMSDFHPESWNPMWSVSSILTGLLSFMMDTSPTTGSVNTTTEEKQRLAKASLAFNCKNPAFRKLFPEYVEKYN 161 (237)
Q Consensus 83 ~G~ICl~iL~~~~~~WsP~~~i~~vL~~I~~lL~~pnp~~~~~~~~~a~~~~la~~s~~~~~~~~~f~~~~r~~v~k~a 161 (237)
+|+||+++|+ ++|+|+++|.+||++|++||.+|||+++ +|.++|+ +|.+|++.|.++||+||++||
T Consensus 101 ~G~ICL~iL~---~~WsP~~ti~~vL~sI~sll~~pn~~~P-ln~~aa~---------l~~~d~~~f~~~ar~~~~~~A 166 (166)
T 2ayv_A 101 QGAICLDILK---DQWSPALTISKVLLSISSLLTDPNPDDP-LVPEIAH---------LYKSDRMRYDQTAREWSQKYA 166 (166)
T ss_dssp TCBBCCGGGT---TTCCTTCCHHHHHHHHHHHHHSCCTTSC-SCHHHHH---------HHHHCHHHHHHHHHHHHHHHC
T ss_pred CCeEEccccc---ccCCCCCcHHHHHHHHHHHHhCCCCCch-hhHHHHH---------HHHHCHHHHHHHHHHHHHHhC
Confidence 9999999997 8999999999999999999999999997 6666554 788999999999999999996
No 10
>2e2c_A Ubiquitin conjugating enzyme; ubiquitin conjugation, ubiquitin carrier protein, thioester ligase; 2.00A {Spisula solidissima} SCOP: d.20.1.1
Probab=100.00 E-value=1.8e-42 Score=283.04 Aligned_cols=146 Identities=25% Similarity=0.521 Sum_probs=134.9
Q ss_pred HHHHHHHHHHHHHHhhCCCCCEEEEeCCCCceeEEEEEEcCCCCCCCCcEEEEEEECCCCCCCCCCceeecCC--Cceec
Q 026499 4 KACVKRLQKEYRALCKEPVSHVVARPSPNDILEWHYVLEGSNGTPFAGGYYYGKIKFPPEYPYKPPGILMITP--NGRFM 81 (237)
Q Consensus 4 ~~~~kRL~kE~~~l~~~~~~gi~v~p~~~nl~~W~~~i~GP~gTpYegG~f~~~i~fP~~YP~~pP~v~F~tP--n~~v~ 81 (237)
..+.+||++|+++|++++++||++.+.++|+++|+++|.||+||||+||+|+++|.||++||++||+|+|.|| |+||+
T Consensus 8 ~~~~~RL~kEl~~l~~~~~~~i~~~p~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~ 87 (156)
T 2e2c_A 8 HSVSKRLQQELRTLLMSGDPGITAFPDGDNLFKWVATLDGPKDTVYESLKYKLTLEFPSDYPYKPPVVKFTTPCWHPNVD 87 (156)
T ss_dssp CCHHHHHHHHHHHHHHHCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBC
T ss_pred hHHHHHHHHHHHHHHhCCCCCEEEEECCCCccEEEEEEECCCCCCcCCcEEEEEEECCCCCCCCCCEEEEeCCcccCCCc
Confidence 3588999999999999999999999999999999999999999999999999999999999999999999995 34488
Q ss_pred CCceEeeccCCCCCCCCCCccchhhhhhhhccccccCCCCCCCCCChHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHh
Q 026499 82 TQKKLCLSMSDFHPESWNPMWSVSSILTGLLSFMMDTSPTTGSVNTTTEEKQRLAKASLAFNCKNPAFRKLFPEYVEKYN 161 (237)
Q Consensus 82 ~~G~ICl~iL~~~~~~WsP~~~i~~vL~~I~~lL~~pnp~~~~~~~~~a~~~~la~~s~~~~~~~~~f~~~~r~~v~k~a 161 (237)
.+|+||+++|+ ++|+|+++|.+||++|++||.+||++++ +|.++|+ +| +|++.|.++||+||++|+
T Consensus 88 ~~G~iCl~iL~---~~W~p~~~i~~vL~si~~ll~~pn~~~p-~n~~aa~---------~~-~d~~~y~~~~~~~~~~~~ 153 (156)
T 2e2c_A 88 QSGNICLDILK---ENWTASYDVRTILLSLQSLLGEPNNASP-LNAQAAD---------MW-SNQTEYKKVLHEKYKTAQ 153 (156)
T ss_dssp TTCBBCCGGGT---TTCCTTCCHHHHHHHHHHHTTSCCCSSC-SCHHHHH---------HT-TCHHHHHHHHHHHHHHHH
T ss_pred cCceEECcccc---ccCCCCCcHHHHHHHHHHHHhCCCCCCH-HHHHHHH---------Hh-cCHHHHHHHHHHHHHHhc
Confidence 89999999997 8999999999999999999999999987 6655553 78 799999999999999998
Q ss_pred hh
Q 026499 162 EQ 163 (237)
Q Consensus 162 ~~ 163 (237)
..
T Consensus 154 ~~ 155 (156)
T 2e2c_A 154 SD 155 (156)
T ss_dssp HC
T ss_pred cC
Confidence 63
No 11
>2r0j_A Ubiquitin carrier protein; ubiquitin conjugating, malaria, ligas conjugation pathway, structural genomics, structural genomi consortium; 1.85A {Plasmodium falciparum} PDB: 3e95_A
Probab=100.00 E-value=1.5e-42 Score=281.44 Aligned_cols=144 Identities=22% Similarity=0.553 Sum_probs=134.4
Q ss_pred HHHHHHHHHHHhhCCCCCEEEEeCCCCceeEEEEEEcCCCCCCCCcEEEEEEECCCCCCCCCCceeecCC--CceecCCc
Q 026499 7 VKRLQKEYRALCKEPVSHVVARPSPNDILEWHYVLEGSNGTPFAGGYYYGKIKFPPEYPYKPPGILMITP--NGRFMTQK 84 (237)
Q Consensus 7 ~kRL~kE~~~l~~~~~~gi~v~p~~~nl~~W~~~i~GP~gTpYegG~f~~~i~fP~~YP~~pP~v~F~tP--n~~v~~~G 84 (237)
.+||++|+++|++++++||++.+.++|+++|+++|.||+||||+||+|+++|.||++||++||+|+|.|| |++|+.+|
T Consensus 3 ~~RL~kEl~~l~~~~~~~i~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~G 82 (149)
T 2r0j_A 3 PRRITKETQNLANEPPPGIMAVPVPENYRHFNILINGPDGTPYEGGTYKLELFLPEQYPMEPPKVRFLTKIYHPNIDKLG 82 (149)
T ss_dssp CHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSCCCBTTBCTTC
T ss_pred HHHHHHHHHHHHhCCCCCEEEEECCCcccEEEEEEECCCCCCcCCCEEEEEEeCCcccCCCCCeeEeccCCccCCCCCCC
Confidence 4899999999999999999999999999999999999999999999999999999999999999999995 34488899
Q ss_pred eEeeccCCCCCCCCCCccchhhhhhhhccccccCCCCCCCCCChHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHhhh
Q 026499 85 KLCLSMSDFHPESWNPMWSVSSILTGLLSFMMDTSPTTGSVNTTTEEKQRLAKASLAFNCKNPAFRKLFPEYVEKYNEQ 163 (237)
Q Consensus 85 ~ICl~iL~~~~~~WsP~~~i~~vL~~I~~lL~~pnp~~~~~~~~~a~~~~la~~s~~~~~~~~~f~~~~r~~v~k~a~~ 163 (237)
+||+++|+ ++|+|+++|.+||++|++||.+||++++ +|.++|. +|.+|++.|.++||+||++||..
T Consensus 83 ~iCl~iL~---~~W~p~~~i~~vl~~i~~ll~~p~~~~p-~n~~aa~---------~~~~~~~~f~~~~~~~~~~~a~~ 148 (149)
T 2r0j_A 83 RICLDILK---DKWSPALQIRTVLLSIQALLSSPEPDDP-LDSKVAE---------HFKQDKNDAEHVARQWNKIYANN 148 (149)
T ss_dssp BBCCGGGT---TTCCTTSCHHHHHHHHHHHHHSCCTTSC-SSCHHHH---------HHHHCHHHHHHHHHHHHHHHSCC
T ss_pred EEechhcC---CCCCCCCcHHHHHHHHHHHHhCCCCCCc-hhHHHHH---------HHHHCHHHHHHHHHHHHHHHccC
Confidence 99999997 8999999999999999999999999997 6666664 78889999999999999999964
No 12
>2c4o_A Ubiquitin-conjugating enzyme E2 D2; thioesterification, ligase, UBL conjugation pathway; HET: CME; 1.94A {Homo sapiens} SCOP: d.20.1.1 PDB: 2clw_A* 2c4p_A
Probab=100.00 E-value=2.1e-42 Score=285.13 Aligned_cols=146 Identities=25% Similarity=0.638 Sum_probs=135.8
Q ss_pred HHHHHHHHHHHHHHhhCCCCCEEEEeCCCCceeEEEEEEcCCCCCCCCcEEEEEEECCCCCCCCCCceeecCC--Cceec
Q 026499 4 KACVKRLQKEYRALCKEPVSHVVARPSPNDILEWHYVLEGSNGTPFAGGYYYGKIKFPPEYPYKPPGILMITP--NGRFM 81 (237)
Q Consensus 4 ~~~~kRL~kE~~~l~~~~~~gi~v~p~~~nl~~W~~~i~GP~gTpYegG~f~~~i~fP~~YP~~pP~v~F~tP--n~~v~ 81 (237)
..+.+||++|+++|+++++.||++.+.++|+++|+++|.||+||||+||+|+++|.||++||++||+|+|.|| |++|+
T Consensus 18 ~~~~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegg~f~l~i~fp~~YP~~PP~v~F~T~i~HPnV~ 97 (165)
T 2c4o_A 18 SMALKRIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNIN 97 (165)
T ss_dssp HHHHHHHHHHHHHHHSSCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCBTTBC
T ss_pred cHHHHHHHHHHHHHHhCCCCCEEEEEcCCCcceeEEEEECCCCCCccCceEEEEEECCCcCCCCCCEEEEecCCcCCcCC
Confidence 4688999999999999999999999999999999999999999999999999999999999999999999995 45588
Q ss_pred CCceEeeccCCCCCCCCCCccchhhhhhhhccccccCCCCCCCCCChHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHh
Q 026499 82 TQKKLCLSMSDFHPESWNPMWSVSSILTGLLSFMMDTSPTTGSVNTTTEEKQRLAKASLAFNCKNPAFRKLFPEYVEKYN 161 (237)
Q Consensus 82 ~~G~ICl~iL~~~~~~WsP~~~i~~vL~~I~~lL~~pnp~~~~~~~~~a~~~~la~~s~~~~~~~~~f~~~~r~~v~k~a 161 (237)
.+|+||+++|+ ++|+|+++|.+||++|++||.+|||+++ +|.++|+ +|.+|++.|.++||+||++||
T Consensus 98 ~~G~ICl~iL~---~~W~P~~ti~~vL~si~~ll~~pn~~~P-~n~~aa~---------~~~~d~~~y~~~ar~~~~~~a 164 (165)
T 2c4o_A 98 SNGSICLDILR---SQWSPALTISKVLLSICSLLCDPNPDDP-LVPEIAR---------IYKTDREKYNRIAREWTQKYA 164 (165)
T ss_dssp TTCBBCCGGGT---TTCCTTCCHHHHHHHHHHHHHSCCTTSC-SSHHHHH---------HHHHCHHHHHHHHHHHHHHTT
T ss_pred CCCeEeehhhc---CCCCCcCcHHHHHHHHHHHHhCCCCCcc-ccHHHHH---------HHHHHHHHHHHHHHHHHHHHh
Confidence 99999999997 8999999999999999999999999987 5655554 788899999999999999998
Q ss_pred h
Q 026499 162 E 162 (237)
Q Consensus 162 ~ 162 (237)
.
T Consensus 165 ~ 165 (165)
T 2c4o_A 165 M 165 (165)
T ss_dssp C
T ss_pred C
Confidence 4
No 13
>2f4w_A Ubiquitin-conjugating enzyme E2, J2; endoplasmic reticulum, ligase, UBL conjugation pathway, structural genomics consortium (SGC); 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=2.2e-42 Score=290.36 Aligned_cols=165 Identities=53% Similarity=1.024 Sum_probs=141.8
Q ss_pred HHHHHHHHHHHHHHhhCCCCCEEEEeCCCCceeEEEEEEcCCCCCCCCcEEEEEEECCCCCCCCCCceeecCCCceecCC
Q 026499 4 KACVKRLQKEYRALCKEPVSHVVARPSPNDILEWHYVLEGSNGTPFAGGYYYGKIKFPPEYPYKPPGILMITPNGRFMTQ 83 (237)
Q Consensus 4 ~~~~kRL~kE~~~l~~~~~~gi~v~p~~~nl~~W~~~i~GP~gTpYegG~f~~~i~fP~~YP~~pP~v~F~tPn~~v~~~ 83 (237)
..+.+||++|+++|++++++||++.+.++|+++|+++|.||+||||+||+|+++|.||++||++||+|+|.|||++++.+
T Consensus 13 ~~a~~RL~kEl~~l~~~~~~~i~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~v~f~T~~~~~~~~ 92 (187)
T 2f4w_A 13 TTATQRLKQDYLRIKKDPVPYICAEPLPSNILEWHYVVRGPEMTPYEGGYYHGKLIFPREFPFKPPSIYMITPNGRFKCN 92 (187)
T ss_dssp -CHHHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCSSBCTT
T ss_pred cHHHHHHHHHHHHHHhCCCCCEEEEEcCCccceeEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCcccccCCCceeccC
Confidence 45889999999999999999999999999999999999999999999999999999999999999999999998888899
Q ss_pred ceEeeccCCCCCCCCCCccchhhhhhhhccccccCCCCCCCCCChHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHhhh
Q 026499 84 KKLCLSMSDFHPESWNPMWSVSSILTGLLSFMMDTSPTTGSVNTTTEEKQRLAKASLAFNCKNPAFRKLFPEYVEKYNEQ 163 (237)
Q Consensus 84 G~ICl~iL~~~~~~WsP~~~i~~vL~~I~~lL~~pnp~~~~~~~~~a~~~~la~~s~~~~~~~~~f~~~~r~~v~k~a~~ 163 (237)
|+||+++|++++++|+|+++|.+||++|++||.+|+|+.++......++.++|..+..|++....|.+.+.+++++|.+.
T Consensus 93 G~ICL~iL~~~~~~W~P~~ti~~vL~si~sll~~p~p~~g~~~~~~~~r~~~a~~s~~~~~~~~~f~~~fp~~~~~~~~~ 172 (187)
T 2f4w_A 93 TRLCLSITDFHPDTWNPAWSVSTILTGLLSFMVEKGPTLGSIETSDFTKRQLAVQSLAFNLKDKVFCELFPEVVEEIKQK 172 (187)
T ss_dssp SCBC----------CCTTCCHHHHHHHHHHHHHSCCCCTTBCCCCHHHHHHHHHHHHHHHHTCHHHHHHCHHHHHHHC--
T ss_pred CeEeeeccccCccCCCCcCcHHHHHHHHHHHhcCCCCCCcccccChHHHHHHHHHHHHHhhcCchHHHhhHHHHHHHHHH
Confidence 99999999766699999999999999999999999999988887888899999999999999999999999999999876
Q ss_pred hhHHh
Q 026499 164 QLAEQ 168 (237)
Q Consensus 164 ~~~~~ 168 (237)
....+
T Consensus 173 ~~~~~ 177 (187)
T 2f4w_A 173 QKAQD 177 (187)
T ss_dssp -----
T ss_pred HHHhh
Confidence 55443
No 14
>1jat_A Ubiquitin-conjugating enzyme E2-17.5 kDa; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1jbb_A 2gmi_A 3hct_B 3hcu_B 4dhi_D 1j7d_B 4dhj_C 4dhz_F
Probab=100.00 E-value=7.5e-43 Score=285.01 Aligned_cols=147 Identities=18% Similarity=0.465 Sum_probs=136.4
Q ss_pred HHHHHHHHHHHHHhhCCCCCEEEEeCCCCceeEEEEEEcCCCCCCCCcEEEEEEECCCCCCCCCCceeecCC--CceecC
Q 026499 5 ACVKRLQKEYRALCKEPVSHVVARPSPNDILEWHYVLEGSNGTPFAGGYYYGKIKFPPEYPYKPPGILMITP--NGRFMT 82 (237)
Q Consensus 5 ~~~kRL~kE~~~l~~~~~~gi~v~p~~~nl~~W~~~i~GP~gTpYegG~f~~~i~fP~~YP~~pP~v~F~tP--n~~v~~ 82 (237)
.+.+||++|+++|++++++||++.+.++|+++|+++|.||+||||+||+|+++|.||++||++||+|+|.|| |++|+.
T Consensus 5 ~~~~RL~kE~~~l~~~~~~~i~~~~~~~~l~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~ 84 (155)
T 1jat_A 5 SLPKRIIKETEKLVSDPVPGITAEPHDDNLRYFQVTIEGPEQSPYEDGIFELELYLPDDYPMEAPKVRFLTKIYHPNIDR 84 (155)
T ss_dssp SCCHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTEEEEEEEECCTTTTTSCCEEEECSCCCBTTBCT
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEECCCchhEEEEEEECCCCCCccCcEEEEEEEcCCCCCCCCCcceeecccccCCCCC
Confidence 457999999999999999999999999999999999999999999999999999999999999999999995 344789
Q ss_pred CceEeeccCCCCCCCCCCccchhhhhhhhccccccCCCCCCCCCChHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHhh
Q 026499 83 QKKLCLSMSDFHPESWNPMWSVSSILTGLLSFMMDTSPTTGSVNTTTEEKQRLAKASLAFNCKNPAFRKLFPEYVEKYNE 162 (237)
Q Consensus 83 ~G~ICl~iL~~~~~~WsP~~~i~~vL~~I~~lL~~pnp~~~~~~~~~a~~~~la~~s~~~~~~~~~f~~~~r~~v~k~a~ 162 (237)
+|+||+++|+ ++|+|+++|.+||++|++||.+||++++ +|.++|+ +|.+|++.|.++||+||++||.
T Consensus 85 ~G~iCl~iL~---~~W~p~~~i~~vl~~i~~ll~~p~~~~p-~n~~aa~---------~~~~~~~~f~~~~r~~~~~~a~ 151 (155)
T 1jat_A 85 LGRICLDVLK---TNWSPALQIRTVLLSIQALLASPNPNDP-LANDVAE---------DWIKNEQGAKAKAREWTKLYAK 151 (155)
T ss_dssp TCCBCCGGGT---TTCCTTCCHHHHHHHHHHHHHSCCTTST-TCCTTHH---------HHHHCHHHHHHHHHHHHHHHSE
T ss_pred CCEEEchhhc---cCCCCCCCHHHHHHHHHHHHhCCCCCCc-ccHHHHH---------HHHHCHHHHHHHHHHHHHHhcc
Confidence 9999999997 8999999999999999999999999997 6666664 7888999999999999999997
Q ss_pred hh
Q 026499 163 QQ 164 (237)
Q Consensus 163 ~~ 164 (237)
.+
T Consensus 152 ~~ 153 (155)
T 1jat_A 152 KK 153 (155)
T ss_dssp EC
T ss_pred cC
Confidence 54
No 15
>2bep_A Ubiquitin-conjugating enzyme E2-25 kDa; ligase, E2 conjugating enzyme, protein degradatio structural proteomics in europe, spine; 1.8A {Bos taurus} SCOP: d.20.1.1 PDB: 2bf8_A
Probab=100.00 E-value=5e-42 Score=281.21 Aligned_cols=148 Identities=20% Similarity=0.475 Sum_probs=134.7
Q ss_pred CCcHHHHHHHHHHHHHHhhC---CCCCEEEEeCCCCceeEEEEEEcCCCCCCCCcEEEEEEECCCCCCCCCCceeecCC-
Q 026499 1 MAEKACVKRLQKEYRALCKE---PVSHVVARPSPNDILEWHYVLEGSNGTPFAGGYYYGKIKFPPEYPYKPPGILMITP- 76 (237)
Q Consensus 1 Mas~~~~kRL~kE~~~l~~~---~~~gi~v~p~~~nl~~W~~~i~GP~gTpYegG~f~~~i~fP~~YP~~pP~v~F~tP- 76 (237)
|++ .+.+||++|+++|+++ ++.||++.+.++|+++|+++|.||+||||+||+|+++|.||++||++||+|+|.||
T Consensus 5 Ms~-~a~~RL~kEl~~l~~~~~~~~~~i~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i 83 (159)
T 2bep_A 5 MAN-IAVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKI 83 (159)
T ss_dssp CCH-HHHHHHHHHHHHHHHCHHHHTTSEEEEECSSSSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCC
T ss_pred chH-HHHHHHHHHHHHHHhcCCCCCCCEEEEeCCCchheEEEEEECCCCCCccCCEEEEEEeCCCcCCCCCCEEEeeCCC
Confidence 553 6889999999999985 57899999999999999999999999999999999999999999999999999994
Q ss_pred -Cceec-CCceEeeccCCCCCCCCCCccchhhhhhhhccccccCCCCCCCCCChHHHHHHHHHHHHHhccChHHHHHHHH
Q 026499 77 -NGRFM-TQKKLCLSMSDFHPESWNPMWSVSSILTGLLSFMMDTSPTTGSVNTTTEEKQRLAKASLAFNCKNPAFRKLFP 154 (237)
Q Consensus 77 -n~~v~-~~G~ICl~iL~~~~~~WsP~~~i~~vL~~I~~lL~~pnp~~~~~~~~~a~~~~la~~s~~~~~~~~~f~~~~r 154 (237)
|+||+ .+|+||+++|+ ++|+|+++|.+||++|++||.+|||+++ +|.++|+ +|++|++.|.++||
T Consensus 84 ~HPni~~~~G~iCl~iL~---~~W~p~~~i~~vl~~i~~ll~~p~~~~p-~n~~aa~---------~~~~~~~~f~~~a~ 150 (159)
T 2bep_A 84 WHPNISSVTGAICLDILK---DQWAAAMTLRTVLLSLQALLAAAEPDDP-QDAVVAN---------QYKQNPEMFKQTAR 150 (159)
T ss_dssp CBTTBCTTTCBBCCGGGT---TTCCTTCCHHHHHHHHHHHHHSCCTTSC-SCHHHHH---------HHHHCHHHHHHHHH
T ss_pred CccCCCCCCCEEeChhhh---ccCCCCCcHHHHHHHHHHHHhCCCCCCc-ccHHHHH---------HHHHCHHHHHHHHH
Confidence 33477 58999999997 8999999999999999999999999987 5655553 78899999999999
Q ss_pred HHHHHHhh
Q 026499 155 EYVEKYNE 162 (237)
Q Consensus 155 ~~v~k~a~ 162 (237)
+||++||.
T Consensus 151 ~~~~~~a~ 158 (159)
T 2bep_A 151 LWAHVYAG 158 (159)
T ss_dssp HHHHHHSC
T ss_pred HHHHHhhc
Confidence 99999985
No 16
>3h8k_A Ubiquitin-conjugating enzyme E2 G2; alpha beta, all alpha, ligase, UBL conjugation pathway, endo reticulum, membrane, metal-binding; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 3fsh_A 2cyx_A 2kly_A
Probab=100.00 E-value=8.4e-42 Score=281.06 Aligned_cols=148 Identities=26% Similarity=0.520 Sum_probs=135.0
Q ss_pred HHHHHHHHHHHHHhhCCCCCEEEEeCCC-CceeEEEEEEcCCCCCCCCcEEEEEEECCCCCCCCCCceeecCC--Cceec
Q 026499 5 ACVKRLQKEYRALCKEPVSHVVARPSPN-DILEWHYVLEGSNGTPFAGGYYYGKIKFPPEYPYKPPGILMITP--NGRFM 81 (237)
Q Consensus 5 ~~~kRL~kE~~~l~~~~~~gi~v~p~~~-nl~~W~~~i~GP~gTpYegG~f~~~i~fP~~YP~~pP~v~F~tP--n~~v~ 81 (237)
.+.+||++|+++|++++++||++.+.++ |+++|+++|.||+||||+||+|+++|.||++||++||+|+|.|| |++|+
T Consensus 3 ~a~~RL~kEl~~l~~~~~~gi~~~~~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPNV~ 82 (164)
T 3h8k_A 3 TALKRLMAEYKQLTLNPPEGIVAGPMNEENFFEWEALIMGPEDTCFEFGVFPAILSFPLDYPLSPPKMRFTCEMFHPNIY 82 (164)
T ss_dssp HHHHHHHHHHHHHHHSCCTTEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCCTTBC
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEECCCCCccEEEEEEeCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEcCCCccCCCC
Confidence 6789999999999999999999998765 99999999999999999999999999999999999999999995 44478
Q ss_pred CCceEeeccCCCC----------CCCCCCccchhhhhhhhccccccCCCCCCCCCChHHHHHHHHHHHHHhccChHHHHH
Q 026499 82 TQKKLCLSMSDFH----------PESWNPMWSVSSILTGLLSFMMDTSPTTGSVNTTTEEKQRLAKASLAFNCKNPAFRK 151 (237)
Q Consensus 82 ~~G~ICl~iL~~~----------~~~WsP~~~i~~vL~~I~~lL~~pnp~~~~~~~~~a~~~~la~~s~~~~~~~~~f~~ 151 (237)
.+|+||+++|+.+ .++|+|+++|.+||++|++||.+||++++ +|.++|. +|.+|++.|.+
T Consensus 83 ~~G~iCl~iL~~~~~~~~~~~~~~~~W~p~~ti~~vL~~i~~ll~~pn~~~p-~n~~aa~---------~~~~~~~~f~~ 152 (164)
T 3h8k_A 83 PDGRVCISILHAPGDDPMGYESSAERWSPVQSVEKILLSVVSMLAEPNDESG-ANVDASK---------MWRDDREQFYK 152 (164)
T ss_dssp TTSBBCCGGGSCSCSCCCSCCTTCCCCCTTCCHHHHHHHHHHHHHSCCCSSC-SSHHHHH---------HHHHCHHHHHH
T ss_pred CCCcEeeecccCcccccccccccccCCCCCCcHHHHHHHHHHHHcCCCCCCc-cCHHHHH---------HHHHCHHHHHH
Confidence 9999999999632 37899999999999999999999999987 6666654 78899999999
Q ss_pred HHHHHHHHHhh
Q 026499 152 LFPEYVEKYNE 162 (237)
Q Consensus 152 ~~r~~v~k~a~ 162 (237)
+||+||++++.
T Consensus 153 ~~~~~~~~s~~ 163 (164)
T 3h8k_A 153 IAKQIVQKSLG 163 (164)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHhhc
Confidence 99999999874
No 17
>3rcz_B SUMO-conjugating enzyme UBC9; SUMO-like domain, protein:protein interaction, protein ligase complex; HET: DNA; 1.90A {Schizosaccharomyces pombe} SCOP: d.20.1.1
Probab=100.00 E-value=3.3e-42 Score=283.50 Aligned_cols=149 Identities=23% Similarity=0.478 Sum_probs=134.7
Q ss_pred cHHHHHHHHHHHHHHhhCCCCCEEEEeCCC-----CceeEEEEEEcCCCCCCCCcEEEEEEECCCCCCCCCCceeecCC-
Q 026499 3 EKACVKRLQKEYRALCKEPVSHVVARPSPN-----DILEWHYVLEGSNGTPFAGGYYYGKIKFPPEYPYKPPGILMITP- 76 (237)
Q Consensus 3 s~~~~kRL~kE~~~l~~~~~~gi~v~p~~~-----nl~~W~~~i~GP~gTpYegG~f~~~i~fP~~YP~~pP~v~F~tP- 76 (237)
|.++.+||++|+++|++++++||++.|.++ |+++|+++|.||+||||+||+|+++|.||++||++||+|+|.|+
T Consensus 8 ~~~~~~RL~kEl~~l~~~~p~gi~~~p~~~~d~~~nl~~W~~~I~Gp~~Tpyegg~f~l~i~fp~~YP~~pP~v~F~t~i 87 (163)
T 3rcz_B 8 SSLCKTRLQEERKQWRRDHPFGFYAKPCKSSDGGLDLMNWKVGIPGKPKTSWEGGLYKLTMAFPEEYPTRPPKCRFTPPL 87 (163)
T ss_dssp -CHHHHHHHHHHHHHHHSCCTTCEEEEEECTTSSEEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCC
T ss_pred cHHHHHHHHHHHHHHHhCCCCCEEEEEccCcCCCCCccEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCCEEEEeCCC
Confidence 347899999999999999999999999765 99999999999999999999999999999999999999999994
Q ss_pred -CceecCCceEeeccCCCCCCCCCCccchhhhhhhhccccccCCCCCCCCCChHHHHHHHHHHHHHhccChHHHHHHHHH
Q 026499 77 -NGRFMTQKKLCLSMSDFHPESWNPMWSVSSILTGLLSFMMDTSPTTGSVNTTTEEKQRLAKASLAFNCKNPAFRKLFPE 155 (237)
Q Consensus 77 -n~~v~~~G~ICl~iL~~~~~~WsP~~~i~~vL~~I~~lL~~pnp~~~~~~~~~a~~~~la~~s~~~~~~~~~f~~~~r~ 155 (237)
|++|+.+|+||+++|+. .++|+|+++|.+||++|++||.+||++++ +|.++|. +|.+|++.|.++||+
T Consensus 88 ~HPnV~~~G~iCl~iL~~-~~~W~p~~ti~~vL~~i~~ll~~P~~~~p-~n~~aa~---------~~~~d~~~y~~~~r~ 156 (163)
T 3rcz_B 88 FHPNVYPSGTVCLSILNE-EEGWKPAITIKQILLGIQDLLDDPNIASP-AQTEAYT---------MFKKDKVEYEKRVRA 156 (163)
T ss_dssp CSTTBCTTSBBCCGGGCT-TTTCCTTCCHHHHHHHHHHHHTSCCTTSC-SCHHHHH---------HHHHCHHHHHHHHHH
T ss_pred ccCCCCCCCcEeccccCC-CCCcCCcCcHHHHHHHHHHHHhCCCCCCc-cCHHHHH---------HHHHCHHHHHHHHHH
Confidence 44478999999999972 24699999999999999999999999987 6656554 788999999999999
Q ss_pred HHHHHhh
Q 026499 156 YVEKYNE 162 (237)
Q Consensus 156 ~v~k~a~ 162 (237)
||++||.
T Consensus 157 ~~~~ya~ 163 (163)
T 3rcz_B 157 QARENAP 163 (163)
T ss_dssp HHHHTCC
T ss_pred HHHHhCc
Confidence 9999974
No 18
>1fxt_A Ubiquitin-conjugating enzyme E2-24 kDa; ligase; NMR {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1fzy_A
Probab=100.00 E-value=2.1e-42 Score=280.54 Aligned_cols=143 Identities=24% Similarity=0.503 Sum_probs=131.8
Q ss_pred HHHHHHHHHHHhhCCCCCEEEEeCCC-CceeEEEEEEcCCCCCCCCcEEEEEEECCCCCCCCCCceeecCC--CceecC-
Q 026499 7 VKRLQKEYRALCKEPVSHVVARPSPN-DILEWHYVLEGSNGTPFAGGYYYGKIKFPPEYPYKPPGILMITP--NGRFMT- 82 (237)
Q Consensus 7 ~kRL~kE~~~l~~~~~~gi~v~p~~~-nl~~W~~~i~GP~gTpYegG~f~~~i~fP~~YP~~pP~v~F~tP--n~~v~~- 82 (237)
.+||++|+++|++++++||++.+.++ |+++|+++|.||+||||+||+|+++|.||++||++||+|+|.|+ |+||+.
T Consensus 3 ~~RL~~El~~l~~~~~~~i~~~~~~~~~l~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPni~~~ 82 (149)
T 1fxt_A 3 AKRIMKEIQAVKDDPAAHITLEFVSESDIHHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTKVYHPNISSV 82 (149)
T ss_dssp HHHHHHHHHHHHHCGGGCCEEEESSSSCSSEEEEEEECCSSSTTCSSEEEEEEECCTTTTSSCCEEEESSCCCBTTBCSS
T ss_pred HHHHHHHHHHHHhCCCCCEEEEECCCCCceEEEEEEECCCCCCcCCcEEEEEEECCCCCCCCCCEEEEeCCCccCCCcCC
Confidence 59999999999999999999999877 99999999999999999999999999999999999999999994 333777
Q ss_pred CceEeeccCCCCCCCCCCccchhhhhhhhccccccCCCCCCCCCChHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHhh
Q 026499 83 QKKLCLSMSDFHPESWNPMWSVSSILTGLLSFMMDTSPTTGSVNTTTEEKQRLAKASLAFNCKNPAFRKLFPEYVEKYNE 162 (237)
Q Consensus 83 ~G~ICl~iL~~~~~~WsP~~~i~~vL~~I~~lL~~pnp~~~~~~~~~a~~~~la~~s~~~~~~~~~f~~~~r~~v~k~a~ 162 (237)
+|+||+++|+ ++|+|+++|.+||++|++||.+|||+++ +|.++|+ +|.+|++.|.++||+||++||.
T Consensus 83 ~G~iCl~iL~---~~W~p~~~i~~vl~~i~~ll~~p~~~~p-~n~~aa~---------~~~~d~~~f~~~a~~~~~~~a~ 149 (149)
T 1fxt_A 83 TGAICLDILK---NAWSPVITLKSALISLQALLQSPEPNDP-QDAEVAQ---------HYLRDRESFNKTAALWTRLYAS 149 (149)
T ss_dssp SCCBCCHHHH---TSCCTTCCHHHHHHHHHHHHHSCCSSSC-SSHHHHH---------HHHHCSSHHHHHHHHHHHHHCC
T ss_pred CCeEeCCcCC---CCCCCCCcHHHHHHHHHHHHhCCCCCCc-ccHHHHH---------HHHHCHHHHHHHHHHHHHHhcC
Confidence 9999999997 8999999999999999999999999987 5655553 7889999999999999999984
No 19
>2gjd_A Ubiquitin-conjugating enzyme E2-18 kDa; UBC9P, SMT3, crystallography, ligase; 1.75A {Saccharomyces cerevisiae} PDB: 2eke_A 3ong_B
Probab=100.00 E-value=4.8e-42 Score=280.82 Aligned_cols=150 Identities=24% Similarity=0.503 Sum_probs=133.4
Q ss_pred CCcHHHHHHHHHHHHHHhhCCCCCEEEEeCC-----CCceeEEEEEEcCCCCCCCCcEEEEEEECCCCCCCCCCceeecC
Q 026499 1 MAEKACVKRLQKEYRALCKEPVSHVVARPSP-----NDILEWHYVLEGSNGTPFAGGYYYGKIKFPPEYPYKPPGILMIT 75 (237)
Q Consensus 1 Mas~~~~kRL~kE~~~l~~~~~~gi~v~p~~-----~nl~~W~~~i~GP~gTpYegG~f~~~i~fP~~YP~~pP~v~F~t 75 (237)
|++ .+.+||++|+++|++++++||++.|.+ +|+++|+++|.||+||||+||+|+++|.||++||++||+|+|.|
T Consensus 1 Ms~-~a~~RL~kE~~~l~~~~~~g~~~~p~~~~~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t 79 (157)
T 2gjd_A 1 MSS-LCLQRLQEERKKWRKDHPFGFYAKPVKKADGSMDLQKWEAGIPGKEGTNWAGGVYPITVEYPNEYPSKPPKVKFPA 79 (157)
T ss_dssp --C-HHHHHHHHHHHHHHHCCCTTCEEEEEECTTSCEEEEEEEEEEECCTTSTTTTBEEEEEEECCTTTTTSCCEEECCT
T ss_pred CCh-HHHHHHHHHHHHHHhCCCCCEEEEeccccCCCCcccEEEEEEECCCCCCcCCeEEEEEEEcCCCCCCCCCeeeccC
Confidence 776 678999999999999999999998864 48999999999999999999999999999999999999999999
Q ss_pred C--CceecCCceEeeccCCCCCCCCCCccchhhhhhhhccccccCCCCCCCCCChHHHHHHHHHHHHHhccChHHHHHHH
Q 026499 76 P--NGRFMTQKKLCLSMSDFHPESWNPMWSVSSILTGLLSFMMDTSPTTGSVNTTTEEKQRLAKASLAFNCKNPAFRKLF 153 (237)
Q Consensus 76 P--n~~v~~~G~ICl~iL~~~~~~WsP~~~i~~vL~~I~~lL~~pnp~~~~~~~~~a~~~~la~~s~~~~~~~~~f~~~~ 153 (237)
+ |++|+.+|+||+++|+. .++|+|+++|.+||++|++||.+|+++++ +|.++|. +|.+|++.|.++|
T Consensus 80 ~i~HPnv~~~G~iCl~iL~~-~~~W~p~~~i~~vl~~i~~ll~~p~~~~p-~n~~aa~---------~~~~~~~~y~~~~ 148 (157)
T 2gjd_A 80 GFYHPNVYPSGTICLSILNE-DQDWRPAITLKQIVLGVQDLLDSPNPNSP-AQEPAWR---------SFSRNKAEYDKKV 148 (157)
T ss_dssp TCCCTTBCTTSBBCCGGGCT-TTTCCTTCCHHHHHHHHHHHHTSCCTTCC-CCHHHHH---------HHHHCHHHHHHHH
T ss_pred CCccCCCCCCCcEeeecccC-CCCCCCCCcHHHHHHHHHHHHhCCCCCCc-cCHHHHH---------HHHHCHHHHHHHH
Confidence 4 34478899999999972 13899999999999999999999999987 5555553 7888999999999
Q ss_pred HHHHHHHhh
Q 026499 154 PEYVEKYNE 162 (237)
Q Consensus 154 r~~v~k~a~ 162 (237)
|+||++||+
T Consensus 149 ~~~~~~~a~ 157 (157)
T 2gjd_A 149 LLQAKQYSK 157 (157)
T ss_dssp HHHHHHTBC
T ss_pred HHHHHHhcC
Confidence 999999984
No 20
>3bzh_A Ubiquitin-conjugating enzyme E2 E1; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC, UBL conjugation pathway; 1.60A {Homo sapiens} PDB: 1y6l_A
Probab=100.00 E-value=1.6e-41 Score=286.45 Aligned_cols=146 Identities=25% Similarity=0.593 Sum_probs=135.4
Q ss_pred HHHHHHHHHHHHHHhhCCCCCEEEEeCCCCceeEEEEEEcCCCCCCCCcEEEEEEECCCCCCCCCCceeecCC--Cceec
Q 026499 4 KACVKRLQKEYRALCKEPVSHVVARPSPNDILEWHYVLEGSNGTPFAGGYYYGKIKFPPEYPYKPPGILMITP--NGRFM 81 (237)
Q Consensus 4 ~~~~kRL~kE~~~l~~~~~~gi~v~p~~~nl~~W~~~i~GP~gTpYegG~f~~~i~fP~~YP~~pP~v~F~tP--n~~v~ 81 (237)
..+.+||++|+++|++++++||++.+.++|+++|+++|.||+||||+||+|+|+|.||++||++||+|+|.|+ |+||+
T Consensus 47 s~a~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNV~ 126 (194)
T 3bzh_A 47 STSAKRIQKELADITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFTPEYPFKPPKVTFRTRIYHCNIN 126 (194)
T ss_dssp HHHHHHHHHHHHHHHHSCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBC
T ss_pred cHHHHHHHHHHHHHHhCCCCCceeecccCccccceEEEeCCCCCCccCCEEEEEEECCCcCCCCCccccccCCCccceEC
Confidence 3578999999999999999999999999999999999999999999999999999999999999999999995 44588
Q ss_pred CCceEeeccCCCCCCCCCCccchhhhhhhhccccccCCCCCCCCCChHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHh
Q 026499 82 TQKKLCLSMSDFHPESWNPMWSVSSILTGLLSFMMDTSPTTGSVNTTTEEKQRLAKASLAFNCKNPAFRKLFPEYVEKYN 161 (237)
Q Consensus 82 ~~G~ICl~iL~~~~~~WsP~~~i~~vL~~I~~lL~~pnp~~~~~~~~~a~~~~la~~s~~~~~~~~~f~~~~r~~v~k~a 161 (237)
.+|.||+++|+ ++|+|+++|.+||++|++||.+|||+++ +|.++|. +|.+|++.|.++||+||++||
T Consensus 127 ~~G~ICL~iL~---~~WsP~~ti~~vL~sI~~ll~~pnp~~P-ln~~aa~---------l~~~d~~~f~~~ar~~t~~ya 193 (194)
T 3bzh_A 127 SQGVICLDILK---DNWSPALTISKVLLSICSLLTDCNPADP-LVGSIAT---------QYMTNRAEHDRMARQWTKRYA 193 (194)
T ss_dssp TTCBBCCGGGT---TTCCTTCCHHHHHHHHHHHHHSCCTTSC-SCHHHHH---------HHHHCHHHHHHHHHHHHHHHC
T ss_pred CCCceechhhh---ccCCCcCcHHHHHHHHHHHHhCCCCccc-hhHHHHH---------HHHHCHHHHHHHHHHHHHHhh
Confidence 89999999997 8999999999999999999999999987 5655553 788999999999999999997
Q ss_pred h
Q 026499 162 E 162 (237)
Q Consensus 162 ~ 162 (237)
.
T Consensus 194 ~ 194 (194)
T 3bzh_A 194 T 194 (194)
T ss_dssp C
T ss_pred C
Confidence 4
No 21
>2f4z_A Tgtwinscan_2721 - E2 domain; ubiquitin conjugating tgtwinscan_2721, structural genomics, structural genomics consortium, SGC; 2.11A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=100.00 E-value=8.6e-42 Score=287.90 Aligned_cols=147 Identities=24% Similarity=0.486 Sum_probs=130.9
Q ss_pred HHHHHHHHHHHHHHhhCCC-------------CCEEEEeCCCCceeEEEEEEcCCCCCCCCcEEEEEEECCCCCCCCCCc
Q 026499 4 KACVKRLQKEYRALCKEPV-------------SHVVARPSPNDILEWHYVLEGSNGTPFAGGYYYGKIKFPPEYPYKPPG 70 (237)
Q Consensus 4 ~~~~kRL~kE~~~l~~~~~-------------~gi~v~p~~~nl~~W~~~i~GP~gTpYegG~f~~~i~fP~~YP~~pP~ 70 (237)
..+.+||++|+++|+++++ .||++.+.++|+++|+++|.||+||||+||+|+++|.||++||++||+
T Consensus 31 ~~a~~RL~kEl~~l~k~~~~~~~~p~~~~~~~~gi~v~~~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~ 110 (193)
T 2f4z_A 31 PREQARLLKELADIQQLQRAHDSEPAATHSTSHGVSAQIVGGDIHRWRGFIAGPLGTPYEGGHFTLDIVIPPDYPYNPPK 110 (193)
T ss_dssp -CHHHHHHHHHHHHHHC----------------CEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCE
T ss_pred CHHHHHHHHHHHHHHhCCCccccccccccCCCCcEEEEEcCCCcceEEEEEeCCCCCCcCCCEEEEEEECCCcCCCCCCe
Confidence 3478999999999999887 799999999999999999999999999999999999999999999999
Q ss_pred eeecCC--Cceec-CCceEeeccCCCCCCCCCCccchhhhhhhhccccccCCCCCCCCCChHHHHHHHHHHHHHhccChH
Q 026499 71 ILMITP--NGRFM-TQKKLCLSMSDFHPESWNPMWSVSSILTGLLSFMMDTSPTTGSVNTTTEEKQRLAKASLAFNCKNP 147 (237)
Q Consensus 71 v~F~tP--n~~v~-~~G~ICl~iL~~~~~~WsP~~~i~~vL~~I~~lL~~pnp~~~~~~~~~a~~~~la~~s~~~~~~~~ 147 (237)
|+|.|| |++|+ .+|+||+++|+ ++|+|+++|.+||++|++||.+|||+++ +|.++|+ +|.+|++
T Consensus 111 V~F~T~i~HPNI~~~~G~ICL~iL~---~~WsP~~ti~~vL~sI~sll~~pnp~~P-~n~~aa~---------l~~~d~~ 177 (193)
T 2f4z_A 111 MKFVTKIWHPNISSQTGAICLDILK---HEWSPALTIRTALLSIQAMLADPVPTDP-QDAEVAK---------MMIENHP 177 (193)
T ss_dssp EEESSCCCBTTBCTTTCBBCCGGGT---TTCCTTSCHHHHHHHHHHHHHSCCTTSC-SCHHHHH---------HHHHCHH
T ss_pred EEEecCCccCCCcCCCCEEECcccc---ccCCCCCCHHHHHHHHHHHHhCCCCCCc-ccHHHHH---------HHHHCHH
Confidence 999994 23366 58999999997 8899999999999999999999999997 5655553 8889999
Q ss_pred HHHHHHHHHHHHHhhh
Q 026499 148 AFRKLFPEYVEKYNEQ 163 (237)
Q Consensus 148 ~f~~~~r~~v~k~a~~ 163 (237)
.|.++||+||++||.+
T Consensus 178 ~f~~~ar~~t~~ya~~ 193 (193)
T 2f4z_A 178 LFVQTAKLWTETFAKE 193 (193)
T ss_dssp HHHHHHHHHHHHHCC-
T ss_pred HHHHHHHHHHHHHccC
Confidence 9999999999999853
No 22
>1i7k_A Ubiquitin-conjugating enzyme E2 H10; ligase; 1.95A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=1e-41 Score=284.41 Aligned_cols=148 Identities=26% Similarity=0.462 Sum_probs=134.4
Q ss_pred HHHHHHHHHHHHHHhhCCCCCEEEEeCCCCceeEEEEEEcCCCCCCCCcEEEEEEECCCCCCCCCCceeecCC--Cceec
Q 026499 4 KACVKRLQKEYRALCKEPVSHVVARPSPNDILEWHYVLEGSNGTPFAGGYYYGKIKFPPEYPYKPPGILMITP--NGRFM 81 (237)
Q Consensus 4 ~~~~kRL~kE~~~l~~~~~~gi~v~p~~~nl~~W~~~i~GP~gTpYegG~f~~~i~fP~~YP~~pP~v~F~tP--n~~v~ 81 (237)
..+.+||++|+++|++++++||++.++++|+++|+++|.||+||||+||+|+|+|.||++||++||+|+|.|| |++|+
T Consensus 29 ~~~~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNV~ 108 (179)
T 1i7k_A 29 GPVGKRLQQELMTLMMSGDKGISAFPESDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYHPNVD 108 (179)
T ss_dssp -CHHHHHHHHHHHHHHHCCTTEEEEEETTEEEEEEEEEEBCTTSTTBTCEEEEEEECCTTTTTSCCEEEESSCCCSTTBC
T ss_pred hHHHHHHHHHHHHHHhCCCCCEEEEEcCCcccccEEEEECCCCCCcCCCEEEEEEECCCcCCCCCceEEEecCCccCccc
Confidence 4678999999999999999999999999999999999999999999999999999999999999999999995 33488
Q ss_pred CCceEeeccCCCCCCCCCCccchhhhhhhhccccccCCCCCCCCCChHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHh
Q 026499 82 TQKKLCLSMSDFHPESWNPMWSVSSILTGLLSFMMDTSPTTGSVNTTTEEKQRLAKASLAFNCKNPAFRKLFPEYVEKYN 161 (237)
Q Consensus 82 ~~G~ICl~iL~~~~~~WsP~~~i~~vL~~I~~lL~~pnp~~~~~~~~~a~~~~la~~s~~~~~~~~~f~~~~r~~v~k~a 161 (237)
.+|+||+++|+ ++|+|+++|.+||++|++||.+||++++ +|.++|. +| +|++.|.++|++++++++
T Consensus 109 ~~G~ICL~iL~---~~WsP~~ti~~vL~sI~sll~~Pn~~~P-ln~~aa~---------l~-~d~~~f~~~v~~~v~~~~ 174 (179)
T 1i7k_A 109 TQGNISLDILK---EKWSALYDVRTILLSIQSLLGEPNIDSP-LNTHAAE---------LW-KNPTAFKKYLQETYSKQV 174 (179)
T ss_dssp TTCBBCCGGGT---TTCCTTCCHHHHHHHHHHHHHSCCTTSC-SCHHHHH---------HT-TSHHHHHHHHHHHHHTTC
T ss_pred cCCeEEcccCc---CcCCCCCCHHHHHHHHHHHHhCCCCcch-hhHHHHH---------Hh-hCHHHHHHHHHHHHHHHh
Confidence 89999999997 8999999999999999999999999997 6655554 78 999999999999999998
Q ss_pred hhhh
Q 026499 162 EQQL 165 (237)
Q Consensus 162 ~~~~ 165 (237)
..+.
T Consensus 175 ~~~~ 178 (179)
T 1i7k_A 175 TSQE 178 (179)
T ss_dssp C---
T ss_pred cccC
Confidence 7653
No 23
>2grr_A Ubiquitin-conjugating enzyme E2 I; ubiquitin, conjugation, small ubiquitin like modifer, SMT3, ligase; 1.30A {Homo sapiens} PDB: 2grq_A 2grn_A 2pe6_A 2gro_A 2grp_A 1u9a_A 1u9b_A 2vrr_A 2px9_B 1z5s_A 2xwu_A 3uin_A 3uio_A 3uip_A* 1kps_A 2o25_C 1a3s_A 3a4s_A 2uyz_A
Probab=100.00 E-value=1.3e-41 Score=279.31 Aligned_cols=150 Identities=21% Similarity=0.467 Sum_probs=134.9
Q ss_pred CCcHHHHHHHHHHHHHHhhCCCCCEEEEeCC-----CCceeEEEEEEcCCCCCCCCcEEEEEEECCCCCCCCCCceeecC
Q 026499 1 MAEKACVKRLQKEYRALCKEPVSHVVARPSP-----NDILEWHYVLEGSNGTPFAGGYYYGKIKFPPEYPYKPPGILMIT 75 (237)
Q Consensus 1 Mas~~~~kRL~kE~~~l~~~~~~gi~v~p~~-----~nl~~W~~~i~GP~gTpYegG~f~~~i~fP~~YP~~pP~v~F~t 75 (237)
|++ .+.+||++|+++|++++++||++.+.. +|+++|+++|.||+||||+||+|+++|.||++||++||+|+|.|
T Consensus 4 M~~-~a~~RL~kE~~~l~~~~~~g~~~~p~~~~~~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t 82 (161)
T 2grr_A 4 MSG-IALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEP 82 (161)
T ss_dssp CCH-HHHHHHHHHHHHHHHSCCTTCEEEEEECTTSCEEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESS
T ss_pred ccH-HHHHHHHHHHHHHHhCCCCCEEEEeccccCCCCCccEEEEEEECCCCCCccCCEEEEEEEcCcccCCCCCEEEEec
Confidence 664 678999999999999999999998853 68999999999999999999999999999999999999999999
Q ss_pred C--CceecCCceEeeccCCCCCCCCCCccchhhhhhhhccccccCCCCCCCCCChHHHHHHHHHHHHHhccChHHHHHHH
Q 026499 76 P--NGRFMTQKKLCLSMSDFHPESWNPMWSVSSILTGLLSFMMDTSPTTGSVNTTTEEKQRLAKASLAFNCKNPAFRKLF 153 (237)
Q Consensus 76 P--n~~v~~~G~ICl~iL~~~~~~WsP~~~i~~vL~~I~~lL~~pnp~~~~~~~~~a~~~~la~~s~~~~~~~~~f~~~~ 153 (237)
| |++|+.+|+||+++|+. .++|+|+++|.+||++|++||.+|+++++ +|.++|. +|.+|++.|.++|
T Consensus 83 ~i~HPnv~~~G~iCl~iL~~-~~~W~p~~~i~~vl~~i~~ll~~p~~~~p-~n~~aa~---------~~~~~~~~y~~~~ 151 (161)
T 2grr_A 83 PLFHPNVYPSGTVCLSILEE-DKDWRPAITIKQILLGIQELLNEPNIQSP-AQAEAYT---------IYCQNRVEYEKRV 151 (161)
T ss_dssp CCCSTTBCTTSBBCCGGGCT-TTTCCTTCCHHHHHHHHHHHHHSCCTTSC-SCHHHHH---------HHHHCHHHHHHHH
T ss_pred CcccCCCCCCCeEeehhcCC-CCCcCCCCcHHHHHHHHHHHHhCCCCCCc-cCHHHHH---------HHHHCHHHHHHHH
Confidence 5 44478899999999972 24899999999999999999999999987 5555553 7888999999999
Q ss_pred HHHHHHHhh
Q 026499 154 PEYVEKYNE 162 (237)
Q Consensus 154 r~~v~k~a~ 162 (237)
|+||++||.
T Consensus 152 ~~~~~~~a~ 160 (161)
T 2grr_A 152 RAQAKKFAP 160 (161)
T ss_dssp HHHHHHTCC
T ss_pred HHHHHHHhc
Confidence 999999985
No 24
>3k9o_A Ubiquitin-conjugating enzyme E2 K; E2-25K, complex structure, ATP-binding, isopeptide BO ligase, nucleotide-binding, UBL conjugation pathway; 1.80A {Homo sapiens} PDB: 3k9p_A 1yla_A 2o25_A
Probab=100.00 E-value=1.9e-41 Score=287.52 Aligned_cols=169 Identities=19% Similarity=0.427 Sum_probs=143.0
Q ss_pred CCcHHHHHHHHHHHHHHhhC---CCCCEEEEeCCCCceeEEEEEEcCCCCCCCCcEEEEEEECCCCCCCCCCceeecCC-
Q 026499 1 MAEKACVKRLQKEYRALCKE---PVSHVVARPSPNDILEWHYVLEGSNGTPFAGGYYYGKIKFPPEYPYKPPGILMITP- 76 (237)
Q Consensus 1 Mas~~~~kRL~kE~~~l~~~---~~~gi~v~p~~~nl~~W~~~i~GP~gTpYegG~f~~~i~fP~~YP~~pP~v~F~tP- 76 (237)
||+ .+.+||++|+++|+++ ++.||++.+.++|+++|+++|.||+||||+||+|+++|.||++||++||+|+|.|+
T Consensus 2 Ms~-~a~~Rl~kEl~~l~~~~~~~~~~i~~~~~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i 80 (201)
T 3k9o_A 2 MAN-IAVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKI 80 (201)
T ss_dssp --C-TTHHHHHHHHHHHHTCHHHHTTSEEEEECSTTSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCC
T ss_pred CcH-HHHHHHHHHHHHHHhCCCCCCCCEEEEECCCCccEEEEEEECCCCCCCCCCEEEEEEECCCcCCCCCCccccccCc
Confidence 775 6789999999999987 36899999999999999999999999999999999999999999999999999994
Q ss_pred -Cceec-CCceEeeccCCCCCCCCCCccchhhhhhhhccccccCCCCCCCCCChHHHHHHHHHHHHHhccChHHHHHHHH
Q 026499 77 -NGRFM-TQKKLCLSMSDFHPESWNPMWSVSSILTGLLSFMMDTSPTTGSVNTTTEEKQRLAKASLAFNCKNPAFRKLFP 154 (237)
Q Consensus 77 -n~~v~-~~G~ICl~iL~~~~~~WsP~~~i~~vL~~I~~lL~~pnp~~~~~~~~~a~~~~la~~s~~~~~~~~~f~~~~r 154 (237)
|++|+ .+|+||+++|+ ++|+|+++|.+||++|++||.+|||+++ +|.++|. +|.+|++.|.++||
T Consensus 81 ~HPnv~~~~G~iCl~iL~---~~W~p~~~i~~vL~~i~~ll~~p~p~~p-~n~~aa~---------~~~~~~~~f~~~a~ 147 (201)
T 3k9o_A 81 WHPNISSVTGAICLDILK---DQWAAAMTLRTVLLSLQALLAAAEPDDP-QDAVVAN---------QYKQNPEMFKQTAR 147 (201)
T ss_dssp CBTTBCTTTCBBCCGGGT---TTCCTTCCHHHHHHHHHHHHHSCCTTSC-SCHHHHH---------HHHHCHHHHHHHHH
T ss_pred ccCCCcCCCCeeeCcccc---cCCCCCCCHHHHHHHHHHHhcCCCCCCc-ccHHHHH---------HHHHCHHHHHHHHH
Confidence 33377 58999999997 8999999999999999999999999997 6666654 89999999999999
Q ss_pred HHHHHHhhhhhH---HhhhhhcCCCCCCCCCC
Q 026499 155 EYVEKYNEQQLA---EQRVSEQLSPESPNEEN 183 (237)
Q Consensus 155 ~~v~k~a~~~~~---~~~~~~~~~~~~~~~~~ 183 (237)
+||++||..... -++..++...++...+.
T Consensus 148 ~~~~~~a~~~~~~~~~eekV~~l~~MGf~~~~ 179 (201)
T 3k9o_A 148 LWAHVYAGAPVSSPEYTKKIENLCAMGFDRNA 179 (201)
T ss_dssp HHHHHHHCCCCCCHHHHHHHHHHHTTTCCHHH
T ss_pred HHHHHhcccccccchhHHHHHHHHHcCCCHHH
Confidence 999999976432 12333444445544433
No 25
>2pwq_A Ubiquitin conjugating enzyme; structural genomics consortium, SGC, ligase; 1.90A {Plasmodium yoelii}
Probab=100.00 E-value=9.5e-42 Score=292.13 Aligned_cols=150 Identities=23% Similarity=0.503 Sum_probs=136.1
Q ss_pred HHHHHHHHHHHHHHhhCCCCCEEEEeCCCCceeEEEEEEcCCCCCCCCcEEEEEEECCCCCCCCCCceeecCC--Cceec
Q 026499 4 KACVKRLQKEYRALCKEPVSHVVARPSPNDILEWHYVLEGSNGTPFAGGYYYGKIKFPPEYPYKPPGILMITP--NGRFM 81 (237)
Q Consensus 4 ~~~~kRL~kE~~~l~~~~~~gi~v~p~~~nl~~W~~~i~GP~gTpYegG~f~~~i~fP~~YP~~pP~v~F~tP--n~~v~ 81 (237)
..+.+||++|+++|++++++||++.+.++|+++|+++|.||+||||+||+|+++|.||++||++||+|+|.|| |++|+
T Consensus 22 s~a~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~V~F~T~i~HPNI~ 101 (216)
T 2pwq_A 22 SKELLRLQKELKDIENENVQEIDAHIKDSNFFEWVGFIKGPEGTPYEGGHFTLAITIPNDYPYNPPKIKFVTKIWHPNIS 101 (216)
T ss_dssp CHHHHHHHHHHHHHHHSCTTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBC
T ss_pred CHHHHHHHHHHHHHHhCCCCCEEEEEcCCccceeEEEEeCCCCCCccceEEEEEEECCCcCCCCCCcccccCCCcCCCCc
Confidence 3678999999999999999999999999999999999999999999999999999999999999999999994 23366
Q ss_pred -CCceEeeccCCCCCCCCCCccchhhhhhhhccccccCCCCCCCCCChHHHHHHHHHHHHHhccChHHHHHHHHHHHHHH
Q 026499 82 -TQKKLCLSMSDFHPESWNPMWSVSSILTGLLSFMMDTSPTTGSVNTTTEEKQRLAKASLAFNCKNPAFRKLFPEYVEKY 160 (237)
Q Consensus 82 -~~G~ICl~iL~~~~~~WsP~~~i~~vL~~I~~lL~~pnp~~~~~~~~~a~~~~la~~s~~~~~~~~~f~~~~r~~v~k~ 160 (237)
.+|.||+++|+ ++|+|+++|.+||++|++||.+|||++| +|.++|. +|.+|++.|.++||+|+++|
T Consensus 102 ~~~G~ICL~iL~---~~WsP~~ti~~VL~sI~sLL~~Pnp~dP-ln~eaa~---------~~~~d~~~f~~~ar~~t~~y 168 (216)
T 2pwq_A 102 SQTGAICLDVLK---NEWSPALTIRTALLSIQALLSDPQPDDP-QDAEVAK---------MYKENHALFVKTASVWTKTF 168 (216)
T ss_dssp TTTCBBCCHHHH---HHCCTTCCHHHHHHHHHHHHHSCCTTSC-SCHHHHH---------HHHHCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEchhhc---ccCCCCCcHHHHHHHHHHHHhCCCCCCc-ccHHHHH---------HHHHCHHHHHHHHHHHHHHh
Confidence 58999999997 8899999999999999999999999997 5655553 78899999999999999999
Q ss_pred hhhhhH
Q 026499 161 NEQQLA 166 (237)
Q Consensus 161 a~~~~~ 166 (237)
|.....
T Consensus 169 a~~~~~ 174 (216)
T 2pwq_A 169 ATGPKE 174 (216)
T ss_dssp SCCC--
T ss_pred cCCCcc
Confidence 986554
No 26
>3rz3_A Ubiquitin-conjugating enzyme E2 R1; ubiquitin conjugating enzyme domain, E2 domain, ligase-ligas inhibitor complex; HET: U94; 2.30A {Homo sapiens} PDB: 2ob4_A
Probab=100.00 E-value=4.5e-41 Score=281.46 Aligned_cols=154 Identities=24% Similarity=0.496 Sum_probs=135.2
Q ss_pred CCcHHHHHHHHHHHHHHhhCCCCCEEEE-eCCCCceeEEEEEEcCCCCCCCCcEEEEEEECCCCCCCCCCceeecCC--C
Q 026499 1 MAEKACVKRLQKEYRALCKEPVSHVVAR-PSPNDILEWHYVLEGSNGTPFAGGYYYGKIKFPPEYPYKPPGILMITP--N 77 (237)
Q Consensus 1 Mas~~~~kRL~kE~~~l~~~~~~gi~v~-p~~~nl~~W~~~i~GP~gTpYegG~f~~~i~fP~~YP~~pP~v~F~tP--n 77 (237)
|++..+.+||++|+++|+++++.||++. ++++|+++|+++|.||+||||+||+|+++|.||++||++||+|+|.|| |
T Consensus 3 m~~~~a~kRL~kEl~~l~~~~~~gi~~~~~~~~nl~~W~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~H 82 (183)
T 3rz3_A 3 MGSPSSQKALLLELKGLQEEPVEGFRVTLVDEGDLYNWEVAIFGPPNTYYEGGYFKARLKFPIDYPYSPPAFRFLTKMWH 82 (183)
T ss_dssp --CCHHHHHHHHHHHHHHHSCCTTEEEEECTTCCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCC
T ss_pred CcchHHHHHHHHHHHHHHhCCCCCEEEEecCccchhheeeeeeCCCCCCCCCCeEEEEEECCCCCCCCCCeeEecCCCcc
Confidence 7888899999999999999999999998 678899999999999999999999999999999999999999999995 3
Q ss_pred ceecCCceEeeccCCCC----------CCCCCCccchhhhhhhhccccccCCCCCCCCCChHHHHHHHHHHHHHhcc---
Q 026499 78 GRFMTQKKLCLSMSDFH----------PESWNPMWSVSSILTGLLSFMMDTSPTTGSVNTTTEEKQRLAKASLAFNC--- 144 (237)
Q Consensus 78 ~~v~~~G~ICl~iL~~~----------~~~WsP~~~i~~vL~~I~~lL~~pnp~~~~~~~~~a~~~~la~~s~~~~~--- 144 (237)
++|+.+|+||+++|+.. .++|+|+++|.+||++|++||.+||++++ +|.+++. +|++
T Consensus 83 PnV~~~G~iClsiL~~~~~~~~~~~~~~~~W~p~~~i~~vL~si~~ll~~Pn~~~p-~n~~aa~---------~~~~~~~ 152 (183)
T 3rz3_A 83 PNIYETGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISLLNEPNTFSP-ANVDASV---------MYRKWKE 152 (183)
T ss_dssp TTBCTTSBBCCTTC--------------CCCCTTCCHHHHHHHHHHHHHSCCCSSC-SSHHHHH---------HHHHHHH
T ss_pred CCCCCCCcEehhhcCcccccccccccccCCCCCcCcHHHHHHHHHHHHhCCCCCCc-ccHHHHH---------HHHhccc
Confidence 44889999999999521 27899999999999999999999999987 5655553 5555
Q ss_pred ---ChHHHHHHHHHHHHHHhhhh
Q 026499 145 ---KNPAFRKLFPEYVEKYNEQQ 164 (237)
Q Consensus 145 ---~~~~f~~~~r~~v~k~a~~~ 164 (237)
++++|.+++|++|+++...-
T Consensus 153 ~~~~~~~y~~~v~~~v~~s~~~~ 175 (183)
T 3rz3_A 153 SKGKDREYTDIIRKQVLGTKVDA 175 (183)
T ss_dssp TTTCCCHHHHHHHHHHHHHHHHH
T ss_pred ccccHHHHHHHHHHHHHHHHHHH
Confidence 78999999999999998754
No 27
>1wzv_A Ubiquitin-conjugating enzyme E2 L6; ligase; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1wzw_A 2kjh_A
Probab=100.00 E-value=3.9e-41 Score=274.79 Aligned_cols=147 Identities=23% Similarity=0.443 Sum_probs=133.8
Q ss_pred HHHHHHHHHHHHHhhCCCCCEEE-EeCCCCceeEEEEEEcCCCCCCCCcEEEEEEECCCCCCCCCCceeecCC--Cceec
Q 026499 5 ACVKRLQKEYRALCKEPVSHVVA-RPSPNDILEWHYVLEGSNGTPFAGGYYYGKIKFPPEYPYKPPGILMITP--NGRFM 81 (237)
Q Consensus 5 ~~~kRL~kE~~~l~~~~~~gi~v-~p~~~nl~~W~~~i~GP~gTpYegG~f~~~i~fP~~YP~~pP~v~F~tP--n~~v~ 81 (237)
.+.+||++|+++|++++++||++ .++++|+++|+++|. |+||||+||+|+++|.||++||++||+|+|.|| |++|+
T Consensus 4 ~~~~RL~kEl~~l~~~~~~~i~~~~~~~~~l~~w~~~I~-P~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnV~ 82 (155)
T 1wzv_A 4 MASMRVVKELEDLQKKPPPYLRNLSSDDANVLVWHALLL-PDQPPYHLKAFNLRISFPPEYPFKPPMIKFTTKIYHPNVD 82 (155)
T ss_dssp -CHHHHHHHHHHHHHSCCTTEEEEEECSSCTTEEEEEEC-CCSTTGGGEEEEEEEECCTTTTSSCCEEEESSCCCBTTBC
T ss_pred hHHHHHHHHHHHHHhCCCCCEEEEecCCCchheEEEEEc-CCCCCCCCCEEEEEEECCCCCCCCCCcceeeCCCccCcCC
Confidence 46799999999999999999999 788999999999999 999999999999999999999999999999995 34478
Q ss_pred CCceEeeccCCCCCCCCCCccchhhhhhhhccccccCCCCCCCCCChHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHh
Q 026499 82 TQKKLCLSMSDFHPESWNPMWSVSSILTGLLSFMMDTSPTTGSVNTTTEEKQRLAKASLAFNCKNPAFRKLFPEYVEKYN 161 (237)
Q Consensus 82 ~~G~ICl~iL~~~~~~WsP~~~i~~vL~~I~~lL~~pnp~~~~~~~~~a~~~~la~~s~~~~~~~~~f~~~~r~~v~k~a 161 (237)
.+|+||+++|+ .++|+|+++|.+||++|++||.+||++++ +|.++|+ +|.+|++.|.++||+||++||
T Consensus 83 ~~G~iCl~iL~--~~~W~p~~~i~~vl~~i~~ll~~p~~~~p-~n~~aa~---------~~~~~~~~y~~~~r~~~~~~a 150 (155)
T 1wzv_A 83 ENGQICLPIIS--SENWKPCTKTCQVLEALNVLVNRPNIREP-LRMDLAD---------LLTQNPELFRKNAEEFTLRFG 150 (155)
T ss_dssp TTCBCCCGGGC--TTTCCTTCCHHHHHHHHHHHHHSCCSSSC-SSHHHHH---------HHHHCHHHHHHHHHHHHHHHC
T ss_pred CCCeEeecCCC--ccCCCCCCcHHHHHHHHHHHHhCCCCCch-HHHHHHH---------HHHHHHHHHHHHHHHHHHHhc
Confidence 89999999993 38999999999999999999999999987 5655553 788999999999999999999
Q ss_pred hhh
Q 026499 162 EQQ 164 (237)
Q Consensus 162 ~~~ 164 (237)
..+
T Consensus 151 ~~~ 153 (155)
T 1wzv_A 151 VDR 153 (155)
T ss_dssp EEC
T ss_pred ccC
Confidence 753
No 28
>3fn1_B NEDD8-conjugating enzyme UBE2F; ligase, ATP-binding, cell cycle, nucleotide-binding, UBL CON pathway; 2.50A {Homo sapiens} PDB: 2edi_A
Probab=100.00 E-value=2.5e-40 Score=273.08 Aligned_cols=147 Identities=20% Similarity=0.349 Sum_probs=132.5
Q ss_pred HHHHHHHHHHHHHhhCCCCCEEEEe-CCCCceeEEEEEEcCCCCCCCCcEEEEEEECCCCCCCCCCceeecCC--Cceec
Q 026499 5 ACVKRLQKEYRALCKEPVSHVVARP-SPNDILEWHYVLEGSNGTPFAGGYYYGKIKFPPEYPYKPPGILMITP--NGRFM 81 (237)
Q Consensus 5 ~~~kRL~kE~~~l~~~~~~gi~v~p-~~~nl~~W~~~i~GP~gTpYegG~f~~~i~fP~~YP~~pP~v~F~tP--n~~v~ 81 (237)
.+.+||++|+++|++++++||++.+ .++|++.|+++| ||++|||+||+|+++|.||++||++||+|+|.|| |+||+
T Consensus 14 ~~~~RL~kEl~~l~~~~~~gi~~~~~~~~~l~~w~~~i-gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~ 92 (167)
T 3fn1_B 14 VRDKLLVKEVAELEANLPCTCKVHFPDPNKLHCFQLTV-TPDEGYYQGGKFQFETEVPDAYNMVPPKVKCLTKIWHPNIT 92 (167)
T ss_dssp HHHHHHHHHHHHHGGGSCTTEEEECSSSSCTTEEEEEE-CCSSSTTTTCCEEEEEECCTTBTTBCCEEEECSCCCCSSBC
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEeCCCCcceeEEEEE-CCCCCccCCCEEEEEEECCCCCCCCCCeeEecCCcccCCCC
Confidence 5789999999999999999999986 467899999998 8999999999999999999999999999999995 44478
Q ss_pred CCceEeeccCCCC---CCCCCCccchhhhhhhhcccccc-CCCCCCCCCChHHHHHHHHHHHHHhccChHHHHHHHHHHH
Q 026499 82 TQKKLCLSMSDFH---PESWNPMWSVSSILTGLLSFMMD-TSPTTGSVNTTTEEKQRLAKASLAFNCKNPAFRKLFPEYV 157 (237)
Q Consensus 82 ~~G~ICl~iL~~~---~~~WsP~~~i~~vL~~I~~lL~~-pnp~~~~~~~~~a~~~~la~~s~~~~~~~~~f~~~~r~~v 157 (237)
.+|+||+++|+.+ +++|+|+++|.+||++|++||.+ ||++++ +|.++|+ +|.+|++.|.++||+||
T Consensus 93 ~~G~iCl~iL~~~~~~~~~W~p~~~i~~vl~~i~~ll~~~pn~~~p-~n~eaa~---------~~~~~~~~f~~~~r~~~ 162 (167)
T 3fn1_B 93 ETGEICLSLLREHSIDGTGWAPTRTLKDVVWGLNSLFTDLLNFDDP-LNIEAAE---------HHLRDKEDFRNKVDDYI 162 (167)
T ss_dssp TTCCBCCGGGSBCSSSTTSBCTTCCHHHHHHHHHHTTTTTCCSSSC-SCHHHHH---------HHHHCHHHHHHHHHHHH
T ss_pred CCCEEechhhccCCCCCCCCCCcCcHHHHHHHHHHHHcCCCCCCcc-hhHHHHH---------HHHHCHHHHHHHHHHHH
Confidence 8999999999742 34899999999999999999999 699987 6666654 78899999999999999
Q ss_pred HHHhh
Q 026499 158 EKYNE 162 (237)
Q Consensus 158 ~k~a~ 162 (237)
++||+
T Consensus 163 ~~~A~ 167 (167)
T 3fn1_B 163 KRYAR 167 (167)
T ss_dssp HHHCC
T ss_pred HHhcC
Confidence 99984
No 29
>1yrv_A Ubiquitin-conjugating ligase MGC351130; structural genomics consortium, SGC, ubiquitin- conjugating enzyme; 2.18A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=1e-40 Score=276.12 Aligned_cols=146 Identities=23% Similarity=0.452 Sum_probs=131.5
Q ss_pred CCcHHHHHHHHHHHHHHhhCCCCCEEEEeCCCCceeEEEEEEcCCCCCCCCcEEEEEEECCCCCCCCCCceeecCC--Cc
Q 026499 1 MAEKACVKRLQKEYRALCKEPVSHVVARPSPNDILEWHYVLEGSNGTPFAGGYYYGKIKFPPEYPYKPPGILMITP--NG 78 (237)
Q Consensus 1 Mas~~~~kRL~kE~~~l~~~~~~gi~v~p~~~nl~~W~~~i~GP~gTpYegG~f~~~i~fP~~YP~~pP~v~F~tP--n~ 78 (237)
|++ .+.+||++|+++|++++++||++.+.++|+++|+++|.||+||||+||+|+++|.||++||++||+|+|.|+ |+
T Consensus 20 M~~-~a~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HP 98 (169)
T 1yrv_A 20 MHG-RAYLLLHRDFCDLKENNYKGITAKPVSEDMMEWEVEIEGLQNSVWQGLVFQLTIHFTSEYNYAPPVVKFITIPFHP 98 (169)
T ss_dssp GGC-HHHHHHHHHHHHHHHHCCTTEEEEECSTTSCEEEEEEECCTTSTTTTCEEEEEEECCTTBTTBCCEEEESSCCCCT
T ss_pred cCh-HHHHHHHHHHHHHHhCCCCCEEEEEcCCccccceeEEECCCCCCccceEEEEEEECCccCCCCCCcceecCCCccC
Confidence 665 678999999999999999999999999999999999999999999999999999999999999999999994 23
Q ss_pred ee-cCCceEeeccCCCCCCCCCCccchhhhhhhhccccccCCCCCCCCCChHHHHHHHHHHHHHhccChHHHHHHHHHHH
Q 026499 79 RF-MTQKKLCLSMSDFHPESWNPMWSVSSILTGLLSFMMDTSPTTGSVNTTTEEKQRLAKASLAFNCKNPAFRKLFPEYV 157 (237)
Q Consensus 79 ~v-~~~G~ICl~iL~~~~~~WsP~~~i~~vL~~I~~lL~~pnp~~~~~~~~~a~~~~la~~s~~~~~~~~~f~~~~r~~v 157 (237)
+| +.+|+||+++|+ .+++|+|+++|.+||++|++||.+||++++ +|.++|+ +|.+|++.|.++ +++|
T Consensus 99 NI~~~~G~ICL~iL~-~~~~WsP~~ti~~vL~sI~sll~~Pn~~~P-ln~eaa~---------l~~~d~~~y~~~-~~~v 166 (169)
T 1yrv_A 99 NVDPHTGQPCIDFLD-NPEKWNTNYTLSSILLALQVMLSNPVLENP-VNLEAAR---------ILVKDESLYRTI-LRLF 166 (169)
T ss_dssp TBCTTTCCBCCHHHH-CGGGCCTTCCHHHHHHHHHHHHTSCCTTSC-SCHHHHH---------HHHSCHHHHHHH-HHHH
T ss_pred cccCCCCeEeehhhc-CCcCCCCcCCHHHHHHHHHHHHhCCCCCCc-hhHHHHH---------HHHHCHHHHHHH-HHHh
Confidence 36 789999999996 237899999999999999999999999997 6655554 889999999998 8888
Q ss_pred HH
Q 026499 158 EK 159 (237)
Q Consensus 158 ~k 159 (237)
++
T Consensus 167 ~~ 168 (169)
T 1yrv_A 167 NR 168 (169)
T ss_dssp C-
T ss_pred hC
Confidence 64
No 30
>3e46_A Ubiquitin-conjugating enzyme E2-25 kDa; huntington interacting, ligase, alternative splicing, cytoplasm, UBL conjugation, UBL conjugation pathway; 1.86A {Homo sapiens} SCOP: a.5.2.1 d.20.1.1 PDB: 3f92_A*
Probab=100.00 E-value=3.2e-40 Score=288.55 Aligned_cols=151 Identities=20% Similarity=0.469 Sum_probs=136.7
Q ss_pred CCcHHHHHHHHHHHHHHhhC---CCCCEEEEeCCCCceeEEEEEEcCCCCCCCCcEEEEEEECCCCCCCCCCceeecCC-
Q 026499 1 MAEKACVKRLQKEYRALCKE---PVSHVVARPSPNDILEWHYVLEGSNGTPFAGGYYYGKIKFPPEYPYKPPGILMITP- 76 (237)
Q Consensus 1 Mas~~~~kRL~kE~~~l~~~---~~~gi~v~p~~~nl~~W~~~i~GP~gTpYegG~f~~~i~fP~~YP~~pP~v~F~tP- 76 (237)
|+ ..+.+||++|+++|+++ ++.||++.+.++|+++|+++|.||+||||+||+|+++|.||++||++||+|+|.|+
T Consensus 54 Ms-~~a~~RL~kEl~~l~~~~~~~~~gi~v~p~~dnl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i 132 (253)
T 3e46_A 54 MA-NIAVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKI 132 (253)
T ss_dssp CC-HHHHHHHHHHHHHHHHCHHHHTTSEEEEECSTTSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCC
T ss_pred cc-HHHHHHHHHHHHHHHhCCCCCCCCEEEEECCCcccEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCCeeeecCCC
Confidence 44 37899999999999987 47899999999999999999999999999999999999999999999999999994
Q ss_pred -Cceec-CCceEeeccCCCCCCCCCCccchhhhhhhhccccccCCCCCCCCCChHHHHHHHHHHHHHhccChHHHHHHHH
Q 026499 77 -NGRFM-TQKKLCLSMSDFHPESWNPMWSVSSILTGLLSFMMDTSPTTGSVNTTTEEKQRLAKASLAFNCKNPAFRKLFP 154 (237)
Q Consensus 77 -n~~v~-~~G~ICl~iL~~~~~~WsP~~~i~~vL~~I~~lL~~pnp~~~~~~~~~a~~~~la~~s~~~~~~~~~f~~~~r 154 (237)
|++|+ .+|.||+++|+ ++|+|+++|.+||++|++||.+|||+++ +|.++|+ +|.+|++.|.++||
T Consensus 133 ~HPNV~~~~G~ICL~iL~---~~WsP~~ti~~vL~sI~~ll~~pnp~~P-ln~eaa~---------l~~~d~~~f~~~ar 199 (253)
T 3e46_A 133 WHPNISSVTGAICLDILK---DQWAAAMTLRTVLLSLQALLAAAEPDDP-QDAVVAN---------QYKQNPEMFKQTAR 199 (253)
T ss_dssp CBTTBCTTTCBBCCGGGT---TCCCTTCCHHHHHHHHHHHHHSCCTTSC-SCHHHHH---------HHHHCHHHHHHHHH
T ss_pred ccCCccCCCCeeeccccc---CCCCCCCCHHHHHHHHHHHhcCCCCCCh-hhHHHHH---------HHHHCHHHHHHHHH
Confidence 33367 58999999997 8999999999999999999999999997 6666654 88999999999999
Q ss_pred HHHHHHhhhhh
Q 026499 155 EYVEKYNEQQL 165 (237)
Q Consensus 155 ~~v~k~a~~~~ 165 (237)
+||++||....
T Consensus 200 ~~t~~yA~~~~ 210 (253)
T 3e46_A 200 LWAHVYAGAPV 210 (253)
T ss_dssp HHHHHHHCCSC
T ss_pred HHHHHhccccc
Confidence 99999997643
No 31
>2y9m_A Ubiquitin-conjugating enzyme E2-21 kDa; ligase-transport protein complex, ubiquitin conjugating ENZY complex, peroxisomal protein; 2.60A {Saccharomyces cerevisiae} PDB: 2y9p_A 2y9o_A
Probab=100.00 E-value=9.4e-40 Score=270.96 Aligned_cols=149 Identities=20% Similarity=0.536 Sum_probs=131.2
Q ss_pred CCcHHHHHHHHHHHHHHhh-C-C------CC---CEEEEe-CCCCceeEEEEEEcCCCCCCCCcEEEEEEECCCCCCCCC
Q 026499 1 MAEKACVKRLQKEYRALCK-E-P------VS---HVVARP-SPNDILEWHYVLEGSNGTPFAGGYYYGKIKFPPEYPYKP 68 (237)
Q Consensus 1 Mas~~~~kRL~kE~~~l~~-~-~------~~---gi~v~p-~~~nl~~W~~~i~GP~gTpYegG~f~~~i~fP~~YP~~p 68 (237)
|++ .+.+||++|+++|++ . + +. ++.+.+ +++|+++|+++|.||+||||+||+|+++|.||++||++|
T Consensus 3 Ms~-~~~~RL~kEl~~l~~~~~~~~~~~~p~~g~~~~~~p~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~P 81 (172)
T 2y9m_A 3 MAD-TCMSRIVKEYKVILKTLASDDPIANPYRGIIESLNPIDETDLSKWEAIISGPSDTPYENHQFRILIEVPSSYPMNP 81 (172)
T ss_dssp -CH-HHHHHHHHHHHHHHHHHTCCCTTTCTTTTTEEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSC
T ss_pred CcH-HHHHHHHHHHHHHHhccCCcccccCCCCcceEEEecCCCCchhEEEEEEECCCCCcccCCEEEEEEECCCcCCCCC
Confidence 554 788999999999998 4 3 33 567788 788999999999999999999999999999999999999
Q ss_pred CceeecC-C--Ccee-cCCceEeeccCCCCCCCCCCccchhhhhhhhccccccCCCCCCCCCChHHHHHHHHHHHHHhcc
Q 026499 69 PGILMIT-P--NGRF-MTQKKLCLSMSDFHPESWNPMWSVSSILTGLLSFMMDTSPTTGSVNTTTEEKQRLAKASLAFNC 144 (237)
Q Consensus 69 P~v~F~t-P--n~~v-~~~G~ICl~iL~~~~~~WsP~~~i~~vL~~I~~lL~~pnp~~~~~~~~~a~~~~la~~s~~~~~ 144 (237)
|+|+|.| + |++| +.+|+||+++|+ +++|+|+++|.+||++|++||.+||++++ +|.++|+ +|.+
T Consensus 82 P~v~f~t~~i~HPni~~~~G~iCl~iL~--~~~W~p~~~i~~vL~si~~ll~~p~~~~p-~n~~aa~---------~~~~ 149 (172)
T 2y9m_A 82 PKISFMQNNILHCNVKSATGEICLNILK--PEEWTPVWDLLHCVHAVWRLLREPVCDSP-LDVDIGN---------IIRC 149 (172)
T ss_dssp CEEEECTTSCCCTTEETTTTEECCGGGS--TTTCCTTCCHHHHHHHHHHHHHSCCTTSC-SSHHHHH---------HHTT
T ss_pred CEEEEeeCCeecCCCcCCCCEEeccccC--CCCCCCcCcHHHHHHHHHHHHhCCCCCCc-cCHHHHH---------HHHh
Confidence 9999999 3 2336 478999999995 47999999999999999999999999997 6666554 8999
Q ss_pred -ChHHHHHHHHHHHHHHhh
Q 026499 145 -KNPAFRKLFPEYVEKYNE 162 (237)
Q Consensus 145 -~~~~f~~~~r~~v~k~a~ 162 (237)
|++.|.++||+||++|+.
T Consensus 150 ~d~~~f~~~~~~~~~~~~~ 168 (172)
T 2y9m_A 150 GDMSAYQGIVKYFLAERER 168 (172)
T ss_dssp TCHHHHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHHHHHHh
Confidence 999999999999999975
No 32
>2awf_A Ubiquitin-conjugating enzyme E2 G1; ligase, UBL conjugation pathway, structural genomics, structural genomics consortium SGC; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1pzv_A
Probab=100.00 E-value=6.8e-40 Score=271.83 Aligned_cols=144 Identities=22% Similarity=0.475 Sum_probs=106.5
Q ss_pred cHHHHHHHHHHHHHHhhCCCCCEEEEeCC-CCceeEEEEEEcCCCCCCCCcEEEEEEECCCCCCCCCCceeecCC--Cce
Q 026499 3 EKACVKRLQKEYRALCKEPVSHVVARPSP-NDILEWHYVLEGSNGTPFAGGYYYGKIKFPPEYPYKPPGILMITP--NGR 79 (237)
Q Consensus 3 s~~~~kRL~kE~~~l~~~~~~gi~v~p~~-~nl~~W~~~i~GP~gTpYegG~f~~~i~fP~~YP~~pP~v~F~tP--n~~ 79 (237)
+..+.+||++|+++|++++++||++.+.+ +|+++|+++|.||+||||+||+|+++|.||++||++||+|+|.|| |++
T Consensus 15 ~~~~~~rL~kEl~~l~~~~~~gi~~~p~~~~nl~~W~~~I~GP~~TpYegG~f~~~i~fp~~YP~~PP~v~F~T~i~HPN 94 (172)
T 2awf_A 15 VPRGSLLLRRQLAELNKNPVEGFSAGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEIWHPN 94 (172)
T ss_dssp CCTTHHHHHHHHHHHHHSCCTTEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCCTT
T ss_pred hHHHHHHHHHHHHHHHhCCCCCEEEEECCCccccccEEEEeCCCCCCcCCcEEEEEEECCcccCCCCCcccccCCCccCC
Confidence 34688999999999999999999999865 799999999999999999999999999999999999999999995 344
Q ss_pred ecCCceEeeccCCC----------CCCCCCCccchhhhhhhhccccccCCCCCCCCCChHHHHHHHHHHHHHhccChH-H
Q 026499 80 FMTQKKLCLSMSDF----------HPESWNPMWSVSSILTGLLSFMMDTSPTTGSVNTTTEEKQRLAKASLAFNCKNP-A 148 (237)
Q Consensus 80 v~~~G~ICl~iL~~----------~~~~WsP~~~i~~vL~~I~~lL~~pnp~~~~~~~~~a~~~~la~~s~~~~~~~~-~ 148 (237)
|+.+|+||+++|+. ..++|+|+++|.+||++|++||.+||++++ +|.++|+ +|.+|++ .
T Consensus 95 V~~~G~IClsiL~~~~~d~~~~~~~~~~WsP~~ti~~vL~sI~sll~~Pn~~~p-~n~~aa~---------~~~~d~~~~ 164 (172)
T 2awf_A 95 VDKNGDVCISILHEPGEDKYGYEKPEERWLPIHTVETIMISVISMLADPNGDSP-ANVDAAK---------EWREDRNGE 164 (172)
T ss_dssp BCTTCBBCCGGGSCC---------CTTSCCTTCCHHHHHHHHHHHHSCC-------------------------------
T ss_pred CCCCCcEehhhcCCcccccccccccCCCCCCcCcHHHHHHHHHHHHHCcCCCCc-cCHHHHH---------HHHHCcHHH
Confidence 88899999999963 136899999999999999999999999987 5666554 7999999 9
Q ss_pred HHHHHHHH
Q 026499 149 FRKLFPEY 156 (237)
Q Consensus 149 f~~~~r~~ 156 (237)
|.++||+|
T Consensus 165 f~~~vr~~ 172 (172)
T 2awf_A 165 FKRKVARC 172 (172)
T ss_dssp --------
T ss_pred HHHHHHhC
Confidence 99999975
No 33
>1tte_A Ubiquitin-conjugating enzyme E2-24 kDa; UBC1, ubiquitin-dependent degradation, ligase; NMR {Saccharomyces cerevisiae} SCOP: a.5.2.1 d.20.1.1
Probab=100.00 E-value=1.3e-40 Score=284.98 Aligned_cols=146 Identities=24% Similarity=0.490 Sum_probs=132.7
Q ss_pred HHHHHHHHHHHHhhCCCCCEEEEeCCC-CceeEEEEEEcCCCCCCCCcEEEEEEECCCCCCCCCCceeecCC--CceecC
Q 026499 6 CVKRLQKEYRALCKEPVSHVVARPSPN-DILEWHYVLEGSNGTPFAGGYYYGKIKFPPEYPYKPPGILMITP--NGRFMT 82 (237)
Q Consensus 6 ~~kRL~kE~~~l~~~~~~gi~v~p~~~-nl~~W~~~i~GP~gTpYegG~f~~~i~fP~~YP~~pP~v~F~tP--n~~v~~ 82 (237)
+.+||++|+++|++++++||++.+.++ ++++|+++|.||+||||+||+|+++|.||++||++||+|+|.|| |++|+.
T Consensus 3 a~~RL~kEl~~l~~~~~~gi~~~p~~~~~l~~w~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~V~F~T~i~HPNI~~ 82 (215)
T 1tte_A 3 RAKRIMKEIQAVKDDPAAHITLEFVSESDIHHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTKVYHPNISS 82 (215)
T ss_dssp THHHHHHHHHHHHTTTCTTCEECCCSSSSCCEEEEECCEEEEETTEEECCEEEEECCSCSSSCCCEEEETTTCCCSSSCS
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEECCCccccccEEEEeCCCCCCcCCCEEEEEEeCCccCCCCCCcccccCCCccCcCcC
Confidence 569999999999999999999999766 56799999999999999999999999999999999999999994 344777
Q ss_pred -CceEeeccCCCCCCCCCCccchhhhhhhhccccccCCCCCCCCCChHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHh
Q 026499 83 -QKKLCLSMSDFHPESWNPMWSVSSILTGLLSFMMDTSPTTGSVNTTTEEKQRLAKASLAFNCKNPAFRKLFPEYVEKYN 161 (237)
Q Consensus 83 -~G~ICl~iL~~~~~~WsP~~~i~~vL~~I~~lL~~pnp~~~~~~~~~a~~~~la~~s~~~~~~~~~f~~~~r~~v~k~a 161 (237)
+|.||+++|+ ++|+|+++|.+||++|++||.+|||+++ .|.++|. +|.+|++.|.++||+||++||
T Consensus 83 ~~G~ICL~iL~---~~WsP~~ti~~VL~sI~sLL~~Pnp~~P-ln~eaa~---------~~~~d~~~f~~~ar~~t~~yA 149 (215)
T 1tte_A 83 VTGAICLDILR---NAWSPVITLKSALISLQALLQSPEPNDP-QDAEVAQ---------HYLRDRESFNKTAALWTRLYA 149 (215)
T ss_dssp SSSCCCSSTTT---CCSCTTCCHHHHHHHHHHHHTSCCCSSC-SCHHHHH---------HHHHCHHHHHHHHHHHHHHSS
T ss_pred CCCEEECccCC---CCCCCcCcHHHHHHHHHHHHhCCCCCCc-cCHHHHH---------HHHHCHHHHHHHHHHHHHHhc
Confidence 9999999997 8999999999999999999999999986 5555543 788999999999999999999
Q ss_pred hhh
Q 026499 162 EQQ 164 (237)
Q Consensus 162 ~~~ 164 (237)
...
T Consensus 150 ~~~ 152 (215)
T 1tte_A 150 SET 152 (215)
T ss_dssp CCC
T ss_pred cCC
Confidence 743
No 34
>2z5d_A Ubiquitin-conjugating enzyme E2 H; UBE2H, SGC, ligase, structural genomics, structural genomics consortium; 2.10A {Homo sapiens}
Probab=100.00 E-value=3e-40 Score=275.43 Aligned_cols=149 Identities=19% Similarity=0.468 Sum_probs=130.5
Q ss_pred CCcH-HHHHHHHHHHHHHhhCCCCCEEEEeCCCCceeEEEEEEcCCCCCCCCcEEEEEEECCCCCCCCCCceeecCC--C
Q 026499 1 MAEK-ACVKRLQKEYRALCKEPVSHVVARPSPNDILEWHYVLEGSNGTPFAGGYYYGKIKFPPEYPYKPPGILMITP--N 77 (237)
Q Consensus 1 Mas~-~~~kRL~kE~~~l~~~~~~gi~v~p~~~nl~~W~~~i~GP~gTpYegG~f~~~i~fP~~YP~~pP~v~F~tP--n 77 (237)
|++. .+.+||++|+++|++ .|+++.+. +|+++|+++|.||+||||+||+|+++|.||++||++||+|+|.|+ |
T Consensus 20 ms~~~~a~~RL~kEl~~l~~---~g~~v~~~-ddl~~W~~~I~GP~~tpYegG~f~l~i~fp~~YP~~PP~V~F~t~i~H 95 (179)
T 2z5d_A 20 MSSPSPGKRRMDTDVIKLIE---SKHEVTIL-GGLNEFVVKFYGPQGTPYEGGVWKVRVDLPDKYPFKSPSIGFMNKIFH 95 (179)
T ss_dssp ---CCHHHHHHHHHHHHHHH---SSSCEEEE-EETTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCB
T ss_pred CCCchHHHHHHHHHHHhcCc---CCCEEEEC-CCCceeEEEEECCCCCCccCCEEEEEeeCCCCCCCCCceEEEecCCcc
Confidence 4442 578999999999985 57888887 679999999999999999999999999999999999999999993 2
Q ss_pred ceecC-CceEeeccCCCCCCCCCCccchhhhhhh-hccccccCCCCCCCCCChHHHHHHHHHHHHHhccChHHHHHHHHH
Q 026499 78 GRFMT-QKKLCLSMSDFHPESWNPMWSVSSILTG-LLSFMMDTSPTTGSVNTTTEEKQRLAKASLAFNCKNPAFRKLFPE 155 (237)
Q Consensus 78 ~~v~~-~G~ICl~iL~~~~~~WsP~~~i~~vL~~-I~~lL~~pnp~~~~~~~~~a~~~~la~~s~~~~~~~~~f~~~~r~ 155 (237)
++|+. +|+||+++|+ ++|+|+++|.+||++ |++||.+|||+++ +|.++|+ +|.+|++.|.++||+
T Consensus 96 PNV~~~~G~ICL~iL~---~~WsP~~ti~~iL~s~I~~Ll~~Pn~~~p-~n~eaa~---------~~~~d~~~y~~~vr~ 162 (179)
T 2z5d_A 96 PNIDEASGTVCLDVIN---QTWTALYDLTNIFESFLPQLLAYPNPIDP-LNGDAAA---------MYLHRPEEYKQKIKE 162 (179)
T ss_dssp TTBCTTTCBBCHHHHH---HHCCTTCCTTHHHHTHHHHHHHSCCCSSC-SCHHHHH---------HHHHCHHHHHHHHHH
T ss_pred CcCCCCCCeEeccccc---cCCCCCCCHHHHHHHHHHHHHhCCCCCCc-cCHHHHH---------HHHHCHHHHHHHHHH
Confidence 33677 9999999997 899999999999999 9999999999987 6666554 788999999999999
Q ss_pred HHHHHhhhhhH
Q 026499 156 YVEKYNEQQLA 166 (237)
Q Consensus 156 ~v~k~a~~~~~ 166 (237)
||++||.....
T Consensus 163 ~~~~~a~~~~~ 173 (179)
T 2z5d_A 163 YIQKYATEEAL 173 (179)
T ss_dssp HHHHHSSHHHH
T ss_pred HHHHHcccchh
Confidence 99999986544
No 35
>2onu_A Ubiquitin-conjugating enzyme, putative; UBC, plasmodium FAL structural genomics consortium, SGC, ligase; HET: PG4; 2.38A {Plasmodium falciparum}
Probab=100.00 E-value=2.3e-40 Score=269.55 Aligned_cols=144 Identities=18% Similarity=0.453 Sum_probs=129.1
Q ss_pred HHHHHHHHHHHHHhhCCCCCEEEEeCCCCceeEEEEEEcCCCCCCCCcEEEEEEECCCCCCCCCCceeecCC--Cceec-
Q 026499 5 ACVKRLQKEYRALCKEPVSHVVARPSPNDILEWHYVLEGSNGTPFAGGYYYGKIKFPPEYPYKPPGILMITP--NGRFM- 81 (237)
Q Consensus 5 ~~~kRL~kE~~~l~~~~~~gi~v~p~~~nl~~W~~~i~GP~gTpYegG~f~~~i~fP~~YP~~pP~v~F~tP--n~~v~- 81 (237)
++.+||++|+++|++. |+++.+.++|+++|+++|.||+||||+||+|+++|.||++||++||+|+|.|+ |++|+
T Consensus 2 sa~~Rl~kEl~~l~~~---~~~v~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPni~~ 78 (152)
T 2onu_A 2 TSLTRKQCDFTKLIMA---GYDLELNNGSTQDFDVMFHGPNGTAYEGGIWKVHVTLPDDYPFASPSIGFMNKLLHPNVDE 78 (152)
T ss_dssp -CCCHHHHTHHHHHHH---TCCEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTTBCT
T ss_pred hHHHHHHHHHHhcCcC---CCEEEEccCccceEEEEEECCCCCcccceEEEEEEcCcccCCCCCCeEEEecCCccCcCcC
Confidence 3569999999999874 78888889999999999999999999999999999999999999999999994 33467
Q ss_pred CCceEeeccCCCCCCCCCCccchhhhhhh-hccccccCCCCCCCCCChHHHHHHHHHHHHHhccChHHHHHHHHHHHHHH
Q 026499 82 TQKKLCLSMSDFHPESWNPMWSVSSILTG-LLSFMMDTSPTTGSVNTTTEEKQRLAKASLAFNCKNPAFRKLFPEYVEKY 160 (237)
Q Consensus 82 ~~G~ICl~iL~~~~~~WsP~~~i~~vL~~-I~~lL~~pnp~~~~~~~~~a~~~~la~~s~~~~~~~~~f~~~~r~~v~k~ 160 (237)
.+|+||+++|+ ++|+|+++|.+||++ |++||.+||++++ +|.++|. +|.+|++.|.++||+||++|
T Consensus 79 ~~G~iCl~il~---~~W~p~~~i~~vl~~ii~~Ll~~Pn~~~P-~n~~aa~---------~~~~d~~~y~~~v~~~~~~~ 145 (152)
T 2onu_A 79 ASGSVCLDVIN---QTWTPLYSLVNVFEVFLPQLLTYPNPSDP-LNSDAAS---------LLMKDKNIYEEKVKEYVKLY 145 (152)
T ss_dssp TTCBBCHHHHH---HHCCTTCCHHHHHHTHHHHHHHSCCCSSC-SSHHHHH---------HHHHCHHHHHHHHHHHHHHH
T ss_pred cCCeEeccccc---ccCCCCCCHHHHHHHHHHHHHhCCCCCCc-ccHHHHH---------HHHHCHHHHHHHHHHHHHHh
Confidence 48999999997 899999999999999 6899999999997 5655553 78889999999999999999
Q ss_pred hhhh
Q 026499 161 NEQQ 164 (237)
Q Consensus 161 a~~~ 164 (237)
|...
T Consensus 146 a~~~ 149 (152)
T 2onu_A 146 ASKD 149 (152)
T ss_dssp SCGG
T ss_pred ccCc
Confidence 9754
No 36
>1c4z_D UBCH7, ubiquitin conjugating enzyme E2; bilobal structure, elongated shape, E3 ubiquitin ligase, E2 ubiquitin conjugating enzyme; 2.60A {Homo sapiens} SCOP: d.20.1.1 PDB: 1fbv_C* 3sy2_C 3sqv_C
Probab=100.00 E-value=5.1e-40 Score=267.88 Aligned_cols=146 Identities=24% Similarity=0.519 Sum_probs=128.5
Q ss_pred HHHHHHHHHHHHhhCCCCCEEEEe-CCCCceeEEEEEEcCCCCCCCCcEEEEEEECCCCCCCCCCceeecCC--CceecC
Q 026499 6 CVKRLQKEYRALCKEPVSHVVARP-SPNDILEWHYVLEGSNGTPFAGGYYYGKIKFPPEYPYKPPGILMITP--NGRFMT 82 (237)
Q Consensus 6 ~~kRL~kE~~~l~~~~~~gi~v~p-~~~nl~~W~~~i~GP~gTpYegG~f~~~i~fP~~YP~~pP~v~F~tP--n~~v~~ 82 (237)
+.+||++|+++|++++++|+.+.+ .++|+++|+++|. |+||||+||+|+++|.||++||++||+|+|.|| |+||+.
T Consensus 3 a~~RL~kEl~~l~~~~~~~~~~~~~~~~~l~~w~~~i~-P~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~ 81 (154)
T 1c4z_D 3 ASRRLMKELEEIRKCGMKNFRNIQVDEANLLTWQGLIV-PDNPPYDKGAFRIEINFPAEYPFKPPKITFKTKIYHPNIDE 81 (154)
T ss_dssp -CTTHHHHHTTCSSSCCSSCEEECSSCSSSSEEEEEEC-CCSSSCCSCCEEEEEECCTTTTTSCCEEEESSCCCCTTBCT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEeeCCCCchheEEEEEe-CCCCCccCCeEEEEEEeCCCCCCCCCEEEEeCCCccccCCC
Confidence 469999999999999999998654 6789999999998 999999999999999999999999999999995 344888
Q ss_pred CceEeeccCCCCCCCCCCccchhhhhhhhccccccCCCCCCCCCChHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHhh
Q 026499 83 QKKLCLSMSDFHPESWNPMWSVSSILTGLLSFMMDTSPTTGSVNTTTEEKQRLAKASLAFNCKNPAFRKLFPEYVEKYNE 162 (237)
Q Consensus 83 ~G~ICl~iL~~~~~~WsP~~~i~~vL~~I~~lL~~pnp~~~~~~~~~a~~~~la~~s~~~~~~~~~f~~~~r~~v~k~a~ 162 (237)
+|+||+++|+ .++|+|+++|.+||++|++||.+||++++ +|.++|. +|.+|++.|.++||+|+++||.
T Consensus 82 ~G~iCl~iL~--~~~W~p~~~i~~vl~~i~~ll~~p~~~~p-~n~~aa~---------~~~~~~~~f~~~~~~~~~~~a~ 149 (154)
T 1c4z_D 82 KGQVCLPVIS--AENWKPATKTDQVIQSLIALVNDPQPEHP-LRADLAE---------EYSKDRKKFCKNAEEFTKKYGE 149 (154)
T ss_dssp TCBBCCTTTS--SSSCCTTCCHHHHHHHHHHHHHSCCCSSC-SCHHHHH---------HHHTCSSTTHHHHHHHHTTC--
T ss_pred CCEEECCCCC--CCCCCCCCcHHHHHHHHHHHHcCCCCCch-hhHHHHH---------HHHHhHHHHHHHHHHHHHHhcc
Confidence 9999999985 37899999999999999999999999987 5655553 7889999999999999999997
Q ss_pred hh
Q 026499 163 QQ 164 (237)
Q Consensus 163 ~~ 164 (237)
..
T Consensus 150 ~~ 151 (154)
T 1c4z_D 150 KR 151 (154)
T ss_dssp --
T ss_pred cC
Confidence 54
No 37
>1y8x_A Ubiquitin-conjugating enzyme E2 M; ubiquitin-conjugating enzyme E2 M, ligase; 2.40A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=9.4e-39 Score=262.09 Aligned_cols=140 Identities=21% Similarity=0.397 Sum_probs=127.4
Q ss_pred HHHHHHHHHHHHHhhCCCCCEEEE-eCCCCceeEEEEEEcCCCCCCCCcEEEEEEECCCCCCCCCCceeecCC--Cceec
Q 026499 5 ACVKRLQKEYRALCKEPVSHVVAR-PSPNDILEWHYVLEGSNGTPFAGGYYYGKIKFPPEYPYKPPGILMITP--NGRFM 81 (237)
Q Consensus 5 ~~~kRL~kE~~~l~~~~~~gi~v~-p~~~nl~~W~~~i~GP~gTpYegG~f~~~i~fP~~YP~~pP~v~F~tP--n~~v~ 81 (237)
.+.+||++|+++| ++++|+++. ++++|+++|+++| ||+||||+||+|+++|.||++||++||+|+|.|| |++|+
T Consensus 6 ~~~~RL~kEl~~l--~~~~~~~~~~~~~~~l~~w~~~i-gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~ 82 (160)
T 1y8x_A 6 AAQLRIQKDINEL--NLPKTCDISFSDPDDLLNFKLVI-CPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMVYHPNID 82 (160)
T ss_dssp HHHHHHHHHHHTC--CCCTTEEEECSSTTCTTEEEEEE-CCSSSTTTTBCEEEEEECCTTTTTSCCEEEECSCCCBTTBC
T ss_pred HHHHHHHHHHHhc--CCCCCeEEEeccCCccceEEEEE-CCCCCCCCCCEEEEEEeCCCcCCCCCCEEEEecCCccCcCC
Confidence 5789999999999 578899998 7889999999998 9999999999999999999999999999999995 34478
Q ss_pred CCceEeeccCCCCCCCCCCccchhhhhhhhccccccCCCCCCCCCChHHHHHHHHHHHHHhccChHHHHHHHHHHHHHH
Q 026499 82 TQKKLCLSMSDFHPESWNPMWSVSSILTGLLSFMMDTSPTTGSVNTTTEEKQRLAKASLAFNCKNPAFRKLFPEYVEKY 160 (237)
Q Consensus 82 ~~G~ICl~iL~~~~~~WsP~~~i~~vL~~I~~lL~~pnp~~~~~~~~~a~~~~la~~s~~~~~~~~~f~~~~r~~v~k~ 160 (237)
.+|.||+++|+ ++|+|+++|.+||++|++||.+||++++ +|.++|. +|.+|++.|.++||++++..
T Consensus 83 ~~G~iCl~iL~---~~W~p~~~i~~vL~~i~~ll~~Pn~~~p-~n~~aa~---------~~~~~~~~f~~~v~~~v~~~ 148 (160)
T 1y8x_A 83 LEGNVCLNILR---EDWKPVLTINSIIYGLQYLFLEPNPEDP-LNKEAAE---------VLQNNRRLFEQNVQRSMRGG 148 (160)
T ss_dssp TTCBBCCGGGT---TTCCTTCCHHHHHHHHHHHHHSCCCSSC-SCHHHHH---------HHHSCHHHHHHHHHHHHHSE
T ss_pred CCCeEEcccch---hhccCCCCHHHHHHHHHHHHhCCCCCCc-cCHHHHH---------HHHHCHHHHHHHHHHHHhhC
Confidence 89999999997 8999999999999999999999999987 5655553 88999999999999998753
No 38
>1yf9_A Ubiquitin carrier protein 4; SGPP, structural genomics, PSI, protein structure initiative ubiquitin conjugating enzyme; 2.00A {Leishmania major} SCOP: d.20.1.1
Probab=100.00 E-value=3.9e-39 Score=267.04 Aligned_cols=147 Identities=21% Similarity=0.477 Sum_probs=129.2
Q ss_pred HHHHHHHHHHHHHhhCCCCCEEEEeCCCCceeEEEEEEcCCCCCCCCcEEEEEEECCCCCCCCCCceeecCC--Cceec-
Q 026499 5 ACVKRLQKEYRALCKEPVSHVVARPSPNDILEWHYVLEGSNGTPFAGGYYYGKIKFPPEYPYKPPGILMITP--NGRFM- 81 (237)
Q Consensus 5 ~~~kRL~kE~~~l~~~~~~gi~v~p~~~nl~~W~~~i~GP~gTpYegG~f~~~i~fP~~YP~~pP~v~F~tP--n~~v~- 81 (237)
.+.+||++|+++|++++. ++ +.++|+++|+++|.||+||||+||+|+++|.||++||++||+|+|.|+ |++|+
T Consensus 12 ~~~~RL~~El~~l~~~~~-~v---~~~~~l~~w~~~I~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~F~t~i~HPNi~~ 87 (171)
T 1yf9_A 12 RSNRRREMDYMRLCNSTR-KV---YPSDTVAEFWVEFKGPEGTPYEDGTWMLHVQLPSDYPFKSPSIGFCNRILHPNVDE 87 (171)
T ss_dssp -CCHHHHHHHHHHHSSSS-CE---EECSSTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBCT
T ss_pred cHHHHHHHHHHHHHhCCC-CC---CCCCCceEEEEEEECCCCCCccCceEEEEEEcCCCCCCCCCeEEeecCcccccCcc
Confidence 457999999999999874 44 357899999999999999999999999999999999999999999994 33477
Q ss_pred CCceEeeccCCCCCCCCCCccchhhhhhhh-ccccccCCCCCCCCCChHHHHHHHHHHHHHhccChHHHHHHHHHHHHHH
Q 026499 82 TQKKLCLSMSDFHPESWNPMWSVSSILTGL-LSFMMDTSPTTGSVNTTTEEKQRLAKASLAFNCKNPAFRKLFPEYVEKY 160 (237)
Q Consensus 82 ~~G~ICl~iL~~~~~~WsP~~~i~~vL~~I-~~lL~~pnp~~~~~~~~~a~~~~la~~s~~~~~~~~~f~~~~r~~v~k~ 160 (237)
.+|+||+++|+ ++|+|+++|.+||++| ++||.+||++++ +|.++|. +|.+|++.|.++||+|+++|
T Consensus 88 ~~G~iCl~iL~---~~W~p~~~i~~vL~sil~~ll~~Pn~~~p-~n~~aa~---------~~~~d~~~y~~~vr~~~~~~ 154 (171)
T 1yf9_A 88 RSGSVCLDVIN---QTWTPMYQLENIFDVFLPQLLRYPNPSDP-LNVQAAH---------LLHADRVGFDALLREHVSTH 154 (171)
T ss_dssp TTCBBCHHHHH---HHCCTTCCTHHHHHTHHHHHHHSCCSSCC-SCHHHHH---------HHHHCHHHHHHHHHHHHHHH
T ss_pred cCCeEeccccc---cCCCCCCcHHHHHHHHHHHHHhCCCCCCc-ccHHHHH---------HHHHCHHHHHHHHHHHHHHH
Confidence 59999999997 8999999999999997 799999999997 5655553 78889999999999999999
Q ss_pred hhhhhHHh
Q 026499 161 NEQQLAEQ 168 (237)
Q Consensus 161 a~~~~~~~ 168 (237)
|.....++
T Consensus 155 a~~~~~~~ 162 (171)
T 1yf9_A 155 ATPQKALE 162 (171)
T ss_dssp CCHHHHHH
T ss_pred cChhhHhc
Confidence 98765543
No 39
>4ddg_A Ubiquitin-conjugating enzyme E2 D2, ubiquitin THI OTUB1; inhibition, hydrolase-ligase complex; 3.30A {Homo sapiens} PDB: 4ddi_A
Probab=100.00 E-value=3.3e-38 Score=292.28 Aligned_cols=149 Identities=24% Similarity=0.596 Sum_probs=138.5
Q ss_pred HHHHHHHHHHHHHhhCCCCCEEEEeCCCCceeEEEEEEcCCCCCCCCcEEEEEEECCCCCCCCCCceeecCC--CceecC
Q 026499 5 ACVKRLQKEYRALCKEPVSHVVARPSPNDILEWHYVLEGSNGTPFAGGYYYGKIKFPPEYPYKPPGILMITP--NGRFMT 82 (237)
Q Consensus 5 ~~~kRL~kE~~~l~~~~~~gi~v~p~~~nl~~W~~~i~GP~gTpYegG~f~~~i~fP~~YP~~pP~v~F~tP--n~~v~~ 82 (237)
.+.+||++|+++|++++++||++.|.++|+++|+++|.||+||||+||+|+++|.||++||++||+|+|.|| |+||+.
T Consensus 3 ~a~~RL~kEl~~l~~~~~~~~~~~p~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~ 82 (399)
T 4ddg_A 3 MALKRIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS 82 (399)
T ss_dssp HHHHHHHHHHHHHHHSCCSSEEEEEETTEEEEEEEEEECCTTSSSTTCEEEEEEECCSSTTTSCCEEEESSCCCCTTBCT
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEEcCCcceEEEEEEECCCCCCCCCCEEEEEEECCcccCCCCcEEEeeccccccccCC
Confidence 578999999999999999999999999999999999999999999999999999999999999999999995 445889
Q ss_pred CceEeeccCCCCCCCCCCccchhhhhhhhccccccCCCCCCCCCChHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHhh
Q 026499 83 QKKLCLSMSDFHPESWNPMWSVSSILTGLLSFMMDTSPTTGSVNTTTEEKQRLAKASLAFNCKNPAFRKLFPEYVEKYNE 162 (237)
Q Consensus 83 ~G~ICl~iL~~~~~~WsP~~~i~~vL~~I~~lL~~pnp~~~~~~~~~a~~~~la~~s~~~~~~~~~f~~~~r~~v~k~a~ 162 (237)
+|.||+++|+ ++|+|+++|.+||++|++||.+|||++| +|.++|. +|.+|++.|.++||+||++|+.
T Consensus 83 ~G~iCl~il~---~~W~p~~~i~~vL~~i~~ll~~pnp~~p-~n~~aa~---------~~~~d~~~y~~~~~~~~~~~a~ 149 (399)
T 4ddg_A 83 NGSISLDILR---SQWSPALTISKVLLSICSLLCDPNPDDP-LVPEIAR---------IYKTDREKYNRIAREWTQKYAM 149 (399)
T ss_dssp TCBBCCGGGT---TSCCTTCCHHHHHHHHHHHHHSCCTTSC-SSHHHHH---------HHHHCHHHHHHHHHHHHHHHTS
T ss_pred CCeEeCcccc---cCCCccccHHHHHHHHHHHHcCCCCCch-hhHHHHH---------HHHHCHHHHHHHHHHHHHHhhc
Confidence 9999999997 8999999999999999999999999997 6666554 7889999999999999999997
Q ss_pred hhhH
Q 026499 163 QQLA 166 (237)
Q Consensus 163 ~~~~ 166 (237)
....
T Consensus 150 ~~v~ 153 (399)
T 4ddg_A 150 GGSA 153 (399)
T ss_dssp CTTH
T ss_pred cccc
Confidence 6555
No 40
>2nvu_C NEDD8-conjugating enzyme UBC12; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=2.1e-38 Score=264.61 Aligned_cols=141 Identities=20% Similarity=0.368 Sum_probs=128.2
Q ss_pred HHHHHHHHHHHHHHhhCCCCCEEEE-eCCCCceeEEEEEEcCCCCCCCCcEEEEEEECCCCCCCCCCceeecCC--Ccee
Q 026499 4 KACVKRLQKEYRALCKEPVSHVVAR-PSPNDILEWHYVLEGSNGTPFAGGYYYGKIKFPPEYPYKPPGILMITP--NGRF 80 (237)
Q Consensus 4 ~~~~kRL~kE~~~l~~~~~~gi~v~-p~~~nl~~W~~~i~GP~gTpYegG~f~~~i~fP~~YP~~pP~v~F~tP--n~~v 80 (237)
..+.+||++|+++| ++++|+++. ++++|+++|+++| ||+||||+||+|+++|.||++||++||+|+|.|| |++|
T Consensus 25 ~~~~~RL~kEl~~l--~~~~~i~~~~p~~~nl~~W~~~i-gP~~tpYegg~f~~~i~fp~~YP~~PP~v~F~t~i~HPNV 101 (180)
T 2nvu_C 25 SAAQLRIQKDINEL--NLPKTCDISFSDPDDLLNFKLVI-CPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMVYHPNI 101 (180)
T ss_dssp CHHHHHHHHHHHTC--CCCTTEEEECSSTTCTTEEEEEE-CCCSGGGTTBCEEEEEECCTTTTTSCCEEEECSCCCBTTB
T ss_pred cHHHHHHHHHHHhc--CCCCCeEEEecccccccceEEEE-CCCCCCCCCCEEEEEEeCCCcCCCCCCcCceeccCccCCC
Confidence 36789999999999 578899998 7889999999998 9999999999999999999999999999999995 4447
Q ss_pred cCCceEeeccCCCCCCCCCCccchhhhhhhhccccccCCCCCCCCCChHHHHHHHHHHHHHhccChHHHHHHHHHHHHHH
Q 026499 81 MTQKKLCLSMSDFHPESWNPMWSVSSILTGLLSFMMDTSPTTGSVNTTTEEKQRLAKASLAFNCKNPAFRKLFPEYVEKY 160 (237)
Q Consensus 81 ~~~G~ICl~iL~~~~~~WsP~~~i~~vL~~I~~lL~~pnp~~~~~~~~~a~~~~la~~s~~~~~~~~~f~~~~r~~v~k~ 160 (237)
+.+|.||+++|+ ++|+|+++|.+||++|++||.+||++++ +|.++|. +|.+|++.|.++||++++..
T Consensus 102 ~~~G~iCl~iL~---~~W~p~~~i~~vL~si~~ll~~Pn~~~p-~n~~aa~---------~~~~d~~~f~~~v~~~v~~~ 168 (180)
T 2nvu_C 102 DLEGNVALNILR---EDWKPVLTINSIIYGLQYLFLEPNPEDP-LNKEAAE---------VLQNNRRLFEQNVQRSMRGG 168 (180)
T ss_dssp CTTSBBCCGGGT---TSCCTTCCHHHHHHHHHHHHHSCCTTSC-SSHHHHH---------HHHHCHHHHHHHHHHHHHSE
T ss_pred CCCCcEEccccc---ccCCCCCCHHHHHHHHHHHHhCCCCCCc-cCHHHHH---------HHHHCHHHHHHHHHHHHhhC
Confidence 889999999997 8999999999999999999999999987 5655554 78899999999999998754
No 41
>3o2u_A NEDD8-conjugating enzyme UBC12; E2 conjugase, ligase; 2.00A {Saccharomyces cerevisiae} PDB: 3tdi_C
Probab=100.00 E-value=1.4e-37 Score=261.71 Aligned_cols=142 Identities=19% Similarity=0.361 Sum_probs=129.0
Q ss_pred HHHHHHHHHHHHHHhhCCCCCEEEE----eCCCCce---eEEEEEEcCCCCCCCCcEEEEEEECCCCCCCCCCceeecCC
Q 026499 4 KACVKRLQKEYRALCKEPVSHVVAR----PSPNDIL---EWHYVLEGSNGTPFAGGYYYGKIKFPPEYPYKPPGILMITP 76 (237)
Q Consensus 4 ~~~~kRL~kE~~~l~~~~~~gi~v~----p~~~nl~---~W~~~i~GP~gTpYegG~f~~~i~fP~~YP~~pP~v~F~tP 76 (237)
..+.+||++|+++|+ +++|+++. ++++|++ +|+++|. |++|||+||+|+++|.||++||++||+|+|.||
T Consensus 28 s~a~~RL~kEl~~l~--~~~~i~~~~~~~p~~~nl~~~~~w~~~I~-p~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~ 104 (190)
T 3o2u_A 28 SAARIRLKRDLDSLD--LPPTVTLNVITSPDSADRSQSPKLEVIVR-PDEGYYNYGSINFNLDFNEVYPIEPPKVVCLKK 104 (190)
T ss_dssp CHHHHHHHHHHHTCC--CCTTEEEEEEECTTCCCTTSCCEEEEEEC-CSSSTTTTCCEEEEEECCTTTTTSCCEEEECSC
T ss_pred cHHHHHHHHHHHhcc--CCCCEEEEecCCCCCccCCcCCeEEEEEc-CCCCCCCCCEEEEEEECCCCCCCCCceeEEecC
Confidence 367899999999998 77899998 8899999 9999997 888999999999999999999999999999995
Q ss_pred --CceecCCceEeeccCCCCCCCCCCccchhhhhhhhccccccCCCCCCCCCChHHHHHHHHHHHHHhccChHHHHHHHH
Q 026499 77 --NGRFMTQKKLCLSMSDFHPESWNPMWSVSSILTGLLSFMMDTSPTTGSVNTTTEEKQRLAKASLAFNCKNPAFRKLFP 154 (237)
Q Consensus 77 --n~~v~~~G~ICl~iL~~~~~~WsP~~~i~~vL~~I~~lL~~pnp~~~~~~~~~a~~~~la~~s~~~~~~~~~f~~~~r 154 (237)
|+||+.+|+||+++|+ ++|+|+++|.+||++|++||.+|||+++ +|.++|+ +|.+|++.|.++||
T Consensus 105 i~HPnV~~~G~iCl~iL~---~~W~p~~~i~~vL~~i~~ll~~pn~~~p-ln~~aa~---------~~~~d~~~f~~~ar 171 (190)
T 3o2u_A 105 IFHPNIDLKGNVCLNILR---EDWSPALDLQSIITGLLFLFLEPNPNDP-LNKDAAK---------LLCEGEKEFAEAVR 171 (190)
T ss_dssp CCCTTBCTTSBBCCGGGT---TTCCTTCCHHHHHHHHHHHHHSCCTTSC-SSHHHHH---------HHHTCHHHHHHHHH
T ss_pred cccCCCCCCCeEechhcc---CCCCCCCCHHHHHHHHHHHHhCCCCCcc-hhHHHHH---------HHHHCHHHHHHHHH
Confidence 4457889999999997 9999999999999999999999999997 6666654 89999999999999
Q ss_pred HHHHHHh
Q 026499 155 EYVEKYN 161 (237)
Q Consensus 155 ~~v~k~a 161 (237)
+|++++.
T Consensus 172 ~~~~~~~ 178 (190)
T 3o2u_A 172 LTMSGGS 178 (190)
T ss_dssp HHHBTCE
T ss_pred HHHHhcC
Confidence 9996543
No 42
>2fo3_A Ubiquitin-conjugating enzyme; SGC, UBC, structural genomics, structural genomics consortium, unknown function; 1.86A {Plasmodium vivax} SCOP: d.20.1.1
Probab=100.00 E-value=1.7e-36 Score=239.22 Aligned_cols=114 Identities=26% Similarity=0.502 Sum_probs=101.9
Q ss_pred HHHHHHHHHHHHHhhCCCCCEEEEeCCCCceeEEEEEEcCCCCCCCCcEEEEEEECCCCCCCCCCceeecCC---Cceec
Q 026499 5 ACVKRLQKEYRALCKEPVSHVVARPSPNDILEWHYVLEGSNGTPFAGGYYYGKIKFPPEYPYKPPGILMITP---NGRFM 81 (237)
Q Consensus 5 ~~~kRL~kE~~~l~~~~~~gi~v~p~~~nl~~W~~~i~GP~gTpYegG~f~~~i~fP~~YP~~pP~v~F~tP---n~~v~ 81 (237)
.+.+||++|+++|+++++.|+++.+.++|+++|+++|.||+||||+||+|+++|.||++||++||+|+|.|+ |.||+
T Consensus 6 ~a~~RL~kEl~~l~~~~~~~~~~~~~~~~l~~w~~~i~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~~HPnv~ 85 (125)
T 2fo3_A 6 NANYRIQKELHNFLNNPPINCTLDVHPNNIRIWIVKYVGLENTIYANEVYKLKIIFPDDYPLKPPIVYFLQKPPKHTHVY 85 (125)
T ss_dssp ---CHHHHHHHHHHHSCCTTEEEEECTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSSCCCBTTBC
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEeCcchhhhhheEEeCCCCCCcCCCEEEEEEEcCCCCCCCCCEEEEeCCCCCCCcCC
Confidence 577999999999999999999999999999999999999999999999999999999999999999999995 34588
Q ss_pred CCceEeeccCCCCCCCCCCccchhhhhhhhccccccCCCC
Q 026499 82 TQKKLCLSMSDFHPESWNPMWSVSSILTGLLSFMMDTSPT 121 (237)
Q Consensus 82 ~~G~ICl~iL~~~~~~WsP~~~i~~vL~~I~~lL~~pnp~ 121 (237)
.+|+||+++|+ ++|+|+++|++||++|++||.+|++.
T Consensus 86 ~~G~iCl~iL~---~~W~P~~~i~~vl~si~~ll~~p~~~ 122 (125)
T 2fo3_A 86 SNGDICLSLLG---DDYNPSLSISGLVLSIISMLSSAKEK 122 (125)
T ss_dssp TTSBBCCGGGT---TTCCTTCCHHHHHHHHHHHHC-----
T ss_pred CCCEEEchhcC---CCCCCCCcHHHHHHHHHHHHhCcccc
Confidence 99999999997 89999999999999999999998765
No 43
>4ds2_A Ubiquitin-conjugating enzyme E2, putative; structural genomics, PSI, protein structure initiative; 2.63A {Trypanosoma cruzi}
Probab=100.00 E-value=1.3e-36 Score=251.00 Aligned_cols=140 Identities=19% Similarity=0.358 Sum_probs=123.4
Q ss_pred CCcHHHHHHHHHHHHHHhhCC------------CCCEEEEeCCCCceeEEEEEEcCCCCCCC--CcEEEEEEECCCCCCC
Q 026499 1 MAEKACVKRLQKEYRALCKEP------------VSHVVARPSPNDILEWHYVLEGSNGTPFA--GGYYYGKIKFPPEYPY 66 (237)
Q Consensus 1 Mas~~~~kRL~kE~~~l~~~~------------~~gi~v~p~~~nl~~W~~~i~GP~gTpYe--gG~f~~~i~fP~~YP~ 66 (237)
|++ .+.+||++|+++|++++ +.|+++.+.++|+++|+++|.||+||||+ ||+|+++|.||++||+
T Consensus 5 Ms~-~a~kRL~kEl~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~nl~~w~~~i~Gp~~tpye~~gg~f~~~i~fp~~YP~ 83 (167)
T 4ds2_A 5 MKN-ISNKRIIKDLKLLLEEVDANNEANSSGSPHSTAIFSVDTDTIYNWILKVKAPADSVYGGAGNTYQLSVLFSDDYPH 83 (167)
T ss_dssp CCC-CCCHHHHHHHHHHHHHHHHHTTC----CCSSCEEEEEEESSTTEEEEEEECCTTSGGGTTCCEEEEEEECCTTTTT
T ss_pred ccH-HHHHHHHHHHHHHHhCcccccccccccCCCCcEEEEeCCCcccEEEEEEECCCCCCccCCCCEEEEEEECCCCCCC
Confidence 765 67899999999999977 78999999999999999999999999999 9999999999999999
Q ss_pred CCCceeecCC--CceecCCceEeeccCCCCCCCCCCccchhhhhh-hhcccccc--CCCCCCCCCChHHHHHHHHHHHHH
Q 026499 67 KPPGILMITP--NGRFMTQKKLCLSMSDFHPESWNPMWSVSSILT-GLLSFMMD--TSPTTGSVNTTTEEKQRLAKASLA 141 (237)
Q Consensus 67 ~pP~v~F~tP--n~~v~~~G~ICl~iL~~~~~~WsP~~~i~~vL~-~I~~lL~~--pnp~~~~~~~~~a~~~~la~~s~~ 141 (237)
+||+|+|.|| |++|+.+|+||+++|+ ++|+|++++.++|+ .|++|+.+ ||++++ +|.++|+ +
T Consensus 84 ~pP~v~f~t~i~HPnv~~~G~iCl~il~---~~W~p~~~i~~vll~~l~~l~~~~~pn~~~p-~n~eaa~---------l 150 (167)
T 4ds2_A 84 EPPTVRFVTPVYSPLVTGEGGICDRMVN---DFWTPDQHASDVIKLVLDRVFSQYKSRRDDD-VNPEARH---------Y 150 (167)
T ss_dssp SCCEEEESSCCCCSSCCTTSCCCTHHHH---TTCCTTSCHHHHHHHHHHHHHTSTTSCCSCC-CCHHHHH---------H
T ss_pred CCCEEEEeCCcccccCCCCCEEEcccCc---CCCCCCCChHHHHHHHHHHHHhcCCCCCcch-HhHHHHH---------H
Confidence 9999999995 4448899999999997 89999999999754 57777765 677776 5655554 7
Q ss_pred hccChHHHHHHHH
Q 026499 142 FNCKNPAFRKLFP 154 (237)
Q Consensus 142 ~~~~~~~f~~~~r 154 (237)
|.+|++.|.++||
T Consensus 151 ~~~d~~~f~~~vr 163 (167)
T 4ds2_A 151 LEKFPQDFAARVR 163 (167)
T ss_dssp HHHCHHHHHHHHT
T ss_pred HHHCHHHHHHHHh
Confidence 8899999999987
No 44
>2h2y_A Ubiquitin-conjugating enzyme; structural genomics, unknown function, structural genomics consortium, SGC; 2.80A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=1.8e-35 Score=236.56 Aligned_cols=113 Identities=27% Similarity=0.499 Sum_probs=106.7
Q ss_pred HHHHHHHHHHHHHhhCCCCCEEEEeCCCCceeEEEEEEcCCCCCCCCcEEEEEEECCCCCCCCCCceeecCC---Cceec
Q 026499 5 ACVKRLQKEYRALCKEPVSHVVARPSPNDILEWHYVLEGSNGTPFAGGYYYGKIKFPPEYPYKPPGILMITP---NGRFM 81 (237)
Q Consensus 5 ~~~kRL~kE~~~l~~~~~~gi~v~p~~~nl~~W~~~i~GP~gTpYegG~f~~~i~fP~~YP~~pP~v~F~tP---n~~v~ 81 (237)
.+.+||++|+++|+++++.|+++.+.++|+++|+++|.||+||||+||+|+++|.||++||++||+|+|.|+ |+||+
T Consensus 20 ~~~~RL~kEl~~l~~~~~~~~~~~~~~~nl~~W~~~I~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~~HPnv~ 99 (136)
T 2h2y_A 20 NANYRIQKELNNFLKNPPINCTIDVHPSNIRIWIVQYVGLENTIYANEVYKIKIIFPDNYPLKPPIVYFLQKPPKHTHVY 99 (136)
T ss_dssp SHHHHHHHHHHHHHHSCCTTEEEEECTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSSCCCCTTBC
T ss_pred HHHHHHHHHHHHHHhCCCCCeEEEeccccccccEEEEECCCCCceeCCEEEEEEEeCCCCCCCCCEEEEeCCCCCCCcCC
Confidence 578999999999999999999999999999999999999999999999999999999999999999999995 34588
Q ss_pred CCceEeeccCCCCCCCCCCccchhhhhhhhccccccCCC
Q 026499 82 TQKKLCLSMSDFHPESWNPMWSVSSILTGLLSFMMDTSP 120 (237)
Q Consensus 82 ~~G~ICl~iL~~~~~~WsP~~~i~~vL~~I~~lL~~pnp 120 (237)
.+|+||+++|+ ++|+|+++|.+||++|++||.+|+.
T Consensus 100 ~~G~ICl~iL~---~~WsP~~ti~~vL~si~sll~~p~~ 135 (136)
T 2h2y_A 100 SNGDICLSVLG---DDYNPSLSISGLILSIISMLSSAKE 135 (136)
T ss_dssp TTCCBCCGGGT---TTCCTTCCHHHHHHHHHHHHSSSCC
T ss_pred CCCEEECcccc---CCCCCCCcHHHHHHHHHHHHhCcCc
Confidence 99999999997 8999999999999999999998753
No 45
>3ceg_A Baculoviral IAP repeat-containing protein 6; apoptosis, ligase, protease inhibitor, thiol protease inhibitor, UBL conjugation pathway; HET: MSE; 2.01A {Homo sapiens}
Probab=100.00 E-value=1.4e-35 Score=266.36 Aligned_cols=156 Identities=21% Similarity=0.311 Sum_probs=131.9
Q ss_pred cHHHHHHHHHHHHHHhhCCCC----CEEEEeCCCCceeEEEEEEcCCCCCCCCcEEEEEEECCCCCCCCCCceeecCC--
Q 026499 3 EKACVKRLQKEYRALCKEPVS----HVVARPSPNDILEWHYVLEGSNGTPFAGGYYYGKIKFPPEYPYKPPGILMITP-- 76 (237)
Q Consensus 3 s~~~~kRL~kE~~~l~~~~~~----gi~v~p~~~nl~~W~~~i~GP~gTpYegG~f~~~i~fP~~YP~~pP~v~F~tP-- 76 (237)
+..+.+||++|+++|++++++ ++.+.+.++|++.|+++|.||+||||+||+|+|+|.||++||++||+|+|.||
T Consensus 74 s~~~~kRL~kEl~~L~k~~p~g~~~~i~v~~~ednl~~w~~~I~GP~~TpYegG~F~l~I~fP~dYP~~PP~V~F~T~~g 153 (323)
T 3ceg_A 74 SAARARRLAQEAVTLSTSLPLSSSSSVFVRCDEERLDIMKVLITGPADTPYANGCFEFDVYFPQDYPSSPPLVNLETTGG 153 (323)
T ss_dssp CHHHHHHHHHHHHHHHHHCCCCSSCCEEEEEESSCTTEEEEEEEBCTTSTTBTCEEEEEEECCTTTTTSCCEEEECCSTT
T ss_pred CHHHHHHHHHHHHHHHhCCCCCcccceeecccCCCccccEEEEeCCCCCCcCCCEEEEEEeCCCCCCCCCCeEEEeccCC
Confidence 457899999999999998776 46677889999999999999999999999999999999999999999999996
Q ss_pred -----CceecCCceEeeccCCCC----CCCCCCcc-chhhhhhhhccccc--cCCCCCCCCCChHHHHHHHHHHHHHhcc
Q 026499 77 -----NGRFMTQKKLCLSMSDFH----PESWNPMW-SVSSILTGLLSFMM--DTSPTTGSVNTTTEEKQRLAKASLAFNC 144 (237)
Q Consensus 77 -----n~~v~~~G~ICl~iL~~~----~~~WsP~~-~i~~vL~~I~~lL~--~pnp~~~~~~~~~a~~~~la~~s~~~~~ 144 (237)
|+||+.+|+||+++|+.+ .++|+|++ +|.+||++|++||. +|++++| .+..++. +.+|..
T Consensus 154 ~~~ifHPNV~~~G~ICLsiL~~~~g~~~e~WsPa~stI~~VLlsIqsLL~~~~Pn~~dP-~~~~a~a-------~~~~~~ 225 (323)
T 3ceg_A 154 HSVRFNPNLYNDGKVCLSILNTWHGRPEEKWNPQTSSFLQVLVSVQSLILVAEPYFNEP-GYERSRG-------TPSGTQ 225 (323)
T ss_dssp TTCCCBTTBCTTCBBCCGGGTSSCCCGGGSCCTTTCCHHHHHHHHHHHTSCSSGGGGST-TGGGGTT-------SHHHHH
T ss_pred CcccccCCCCcCCeEechhhccccCCCcCCCCcCcCCHHHHHHHHHHHHcCCCCCCCCc-cCHHHHH-------hhhhhh
Confidence 456889999999999743 26899999 89999999999997 5555665 3332210 126778
Q ss_pred ChHHHHHHHHHHHHHHhhhhhH
Q 026499 145 KNPAFRKLFPEYVEKYNEQQLA 166 (237)
Q Consensus 145 ~~~~f~~~~r~~v~k~a~~~~~ 166 (237)
|++.|.++||+|+.+||.....
T Consensus 226 d~~~Y~~~vr~~t~k~A~~~~l 247 (323)
T 3ceg_A 226 SSREYDGNIRQATVKWAMLEQI 247 (323)
T ss_dssp HHHHHHHHHHHHHHHHTTHHHH
T ss_pred hHHHHHHHHHHHHHHHhhHHHH
Confidence 9999999999999999865433
No 46
>2a7l_A Hypothetical ubiquitin-conjugating enzyme LOC55284; structural genomics consortium, (SGC), ligase; 1.82A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=5.8e-35 Score=233.63 Aligned_cols=111 Identities=31% Similarity=0.576 Sum_probs=102.5
Q ss_pred CCcHHHHHHHHHHHHHHhhCCCCCEEEE--eCCCCceeEEEEEEcCCCCCCCCcEEEEEEECCCCCCCCCCceeecCC--
Q 026499 1 MAEKACVKRLQKEYRALCKEPVSHVVAR--PSPNDILEWHYVLEGSNGTPFAGGYYYGKIKFPPEYPYKPPGILMITP-- 76 (237)
Q Consensus 1 Mas~~~~kRL~kE~~~l~~~~~~gi~v~--p~~~nl~~W~~~i~GP~gTpYegG~f~~~i~fP~~YP~~pP~v~F~tP-- 76 (237)
|++ +.+||++|+++|++++++||++. ++++|+++|+++|.||+||||+||+|+++|.||++||++||+|+|.||
T Consensus 20 Ms~--~~~RL~kEl~~l~~~~~~gi~v~~~~~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i~ 97 (136)
T 2a7l_A 20 MAS--MQKRLQKELLALQNDPPPGMTLNEKSVQNSITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYPFDSPQVMFTGENI 97 (136)
T ss_dssp GTT--SCHHHHHHHHHHHHSCCTTCCCCTTCCCCSCEEEEEEEECCTTSTTTTCEEEEEEEECTTTTTSCCEEEEESSCC
T ss_pred ccH--HHHHHHHHHHHHHhCCCCCEEEEEeeCccccceeEEEEECCCCCccccEEEEEEEECCCCCCCCCCEEEEeCCCc
Confidence 554 24999999999999999999965 788999999999999999999999999999999999999999999995
Q ss_pred --CceecCCceEeeccCCCCCCCCCCccchhhhhhhhccccc
Q 026499 77 --NGRFMTQKKLCLSMSDFHPESWNPMWSVSSILTGLLSFMM 116 (237)
Q Consensus 77 --n~~v~~~G~ICl~iL~~~~~~WsP~~~i~~vL~~I~~lL~ 116 (237)
|++|+.+|+||+++|+ ++|+|+++|++||++|++||.
T Consensus 98 ~~HPNV~~~G~ICL~iL~---~~WsP~~ti~~vL~sI~slL~ 136 (136)
T 2a7l_A 98 PVHPHVYSNGHICLSILT---EDWSPALSVQSVCLSIISMLS 136 (136)
T ss_dssp CCBTTBCTTCBBCCGGGT---TTCCTTSCHHHHHHHHHHHTC
T ss_pred CCCccCCCCCeEEchhcC---CCCCCCCcHHHHHHHHHHHhC
Confidence 4468899999999997 899999999999999999984
No 47
>2q0v_A Ubiquitin-conjugating enzyme E2, putative; malaria, structural G structural genomics consortium, SGC, ligase; 2.40A {Plasmodium falciparum} PDB: 3e95_C
Probab=100.00 E-value=8.4e-35 Score=237.68 Aligned_cols=122 Identities=20% Similarity=0.259 Sum_probs=109.1
Q ss_pred HHHHHHHHHHHHHhhC-CCCCEEEEeCC-C--CceeEEEEEEcCCCCCCCCcEEEEEEECCCCCCCCCCceeecCC--Cc
Q 026499 5 ACVKRLQKEYRALCKE-PVSHVVARPSP-N--DILEWHYVLEGSNGTPFAGGYYYGKIKFPPEYPYKPPGILMITP--NG 78 (237)
Q Consensus 5 ~~~kRL~kE~~~l~~~-~~~gi~v~p~~-~--nl~~W~~~i~GP~gTpYegG~f~~~i~fP~~YP~~pP~v~F~tP--n~ 78 (237)
.+.+||++|+++|+++ ++.||++.+.. + |+++|+++|.||+||||+||+|+++|.||++||++||+|+|.|| |+
T Consensus 21 ~~~~RL~kEl~~l~~~~~~~~i~~~~~~~~d~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~t~i~HP 100 (156)
T 2q0v_A 21 PRSFRLLDELERGQKGNVSEGVSFGLESADDITLSNWSCTIFGQPGTVFENRIYSLTIFCDDNYPDSPPTVKFDTKIEMS 100 (156)
T ss_dssp CHHHHHHHHHHHHHCC-CCTTEEEEESSTTCTTCCEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESBCCCCT
T ss_pred hHHHHHHHHHHHHHhCCCCCCeEEEECCCccccceeeEEEEECCCCCCcCCcEEEEEEECCCcCCCCCCeEEEEcccccC
Confidence 5789999999999998 78899998853 3 59999999999999999999999999999999999999999994 33
Q ss_pred eecCCceE---eeccCCCCCCCCCCccchhhhhhhhccccccCCCCCCCCCChHHH
Q 026499 79 RFMTQKKL---CLSMSDFHPESWNPMWSVSSILTGLLSFMMDTSPTTGSVNTTTEE 131 (237)
Q Consensus 79 ~v~~~G~I---Cl~iL~~~~~~WsP~~~i~~vL~~I~~lL~~pnp~~~~~~~~~a~ 131 (237)
+|+.+|+| |+++|+ +|+|+++|++||++|++||.+||++++ ++.++|+
T Consensus 101 NV~~~G~icisCL~iL~----~WsP~~ti~~vL~sI~~ll~~Pn~~~p-~n~~aa~ 151 (156)
T 2q0v_A 101 CVDNCGRVIKNNLHILK----NWNRNYTIETILISLRQEMLSSANKRL-PQPNEGE 151 (156)
T ss_dssp TBCTTSBBCGGGSHHHH----TCCTTCCHHHHHHHHHHHTTSTTTTTC-CCCCTTC
T ss_pred CCccCCeEehhhccccc----CCCCcCcHHHHHHHHHHHHhCCCCCCc-CChHHHH
Confidence 47889999 888884 599999999999999999999999987 6666653
No 48
>1jat_B Ubiquitin-conjugating enzyme variant MMS2; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 2gmi_B
Probab=100.00 E-value=4.2e-35 Score=234.89 Aligned_cols=125 Identities=15% Similarity=0.203 Sum_probs=107.8
Q ss_pred CCcHHHHHHHHHHHHHHhhC-CCCCEEEEeCC-C--CceeEEEEEEcCCCCCCCCcEEEEEEECCCCCCCCCCceeecCC
Q 026499 1 MAEKACVKRLQKEYRALCKE-PVSHVVARPSP-N--DILEWHYVLEGSNGTPFAGGYYYGKIKFPPEYPYKPPGILMITP 76 (237)
Q Consensus 1 Mas~~~~kRL~kE~~~l~~~-~~~gi~v~p~~-~--nl~~W~~~i~GP~gTpYegG~f~~~i~fP~~YP~~pP~v~F~tP 76 (237)
|+..++.+||++|+++|+++ ++.|+++.+.+ + |+++|+++|.||+||||+||+|+++|.||++||++||+|+|.||
T Consensus 2 m~~~~~~~RL~kEl~~l~~~~~~~~~~~~~~~~~d~nl~~w~~~i~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~ 81 (138)
T 1jat_B 2 MSKVPRNFRLLEELEKGEKGFGPESCSYGLADSDDITMTKWNGTILGPPHSNHENRIYSLSIDCGPNYPDSPPKVTFISK 81 (138)
T ss_dssp -CCCCHHHHHHHHHHHHHC----CCEEEEESSTTCTTCCEEEEEEECCSSSTTTTCEEEEEEECCTTTTTSCCEEEESBC
T ss_pred cchHHHHHHHHHHHHHHHhcCCCCCEEEEeCCCCCCcceEEEEEEECCCCCCccceEEEEEEECCCCCCCCCCceEEEcc
Confidence 78778889999999999998 78999998853 3 59999999999999999999999999999999999999999994
Q ss_pred --CceecCC-ceE--eeccCCCCCCCCCCccchhhhhhhhccccccCCCCCCCCCChHH
Q 026499 77 --NGRFMTQ-KKL--CLSMSDFHPESWNPMWSVSSILTGLLSFMMDTSPTTGSVNTTTE 130 (237)
Q Consensus 77 --n~~v~~~-G~I--Cl~iL~~~~~~WsP~~~i~~vL~~I~~lL~~pnp~~~~~~~~~a 130 (237)
|.+|+.+ |+| |+++| ++|+|+++|++||++|++||.+||++++ ++.++|
T Consensus 82 i~HPnv~~~~G~i~~cL~~l----~~W~p~~~i~~vl~~i~~ll~~pn~~~p-~~~~~~ 135 (138)
T 1jat_B 82 INLPCVNPTTGEVQTDFHTL----RDWKRAYTMETLLLDLRKEMATPANKKL-RQPKEG 135 (138)
T ss_dssp CCCTTBCTTTCBBCTTSHHH----HTCCTTCCHHHHHHHHHHHHTSHHHHTS-CCCCTT
T ss_pred cccCCEeCCCCEEeeecccC----CCCCCcCcHHHHHHHHHHHHcCCCCCCC-CCcchh
Confidence 3347775 999 99987 4799999999999999999999999987 555544
No 49
>2a4d_A Ubiquitin-conjugating enzyme E2 variant 1; alternative splicing, nuclear protein, UBL conjugation pathway,ubiquitin, ligase, structural genomics; 1.69A {Homo sapiens} SCOP: d.20.1.1 PDB: 2c2v_C 1j7d_A 1j74_A 1zgu_A
Probab=100.00 E-value=2.4e-34 Score=235.79 Aligned_cols=125 Identities=19% Similarity=0.223 Sum_probs=109.0
Q ss_pred HHHHHHHHHHHHHHhhCCCCC-EEEEe-CCCC--ceeEEEEEEcCCCCCCCCcEEEEEEECCCCCCCCCCceeecCC--C
Q 026499 4 KACVKRLQKEYRALCKEPVSH-VVARP-SPND--ILEWHYVLEGSNGTPFAGGYYYGKIKFPPEYPYKPPGILMITP--N 77 (237)
Q Consensus 4 ~~~~kRL~kE~~~l~~~~~~g-i~v~p-~~~n--l~~W~~~i~GP~gTpYegG~f~~~i~fP~~YP~~pP~v~F~tP--n 77 (237)
..+.+||++|+++|++++++| +.+.+ +++| +++|+++|.||+||||+||+|+++|.||++||++||+|+|.|| |
T Consensus 24 ~p~~~RL~kEl~~l~~~~~~g~~~~~~~~~~d~~l~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i~H 103 (160)
T 2a4d_A 24 VPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKINM 103 (160)
T ss_dssp HHHHHHHHHHHHHHHSCCTTSSEEEEESSTTCTTCCEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESBCCCC
T ss_pred chHHHHHHHHHHHHHhCCCCCcEEEEecCCccccceeeEEEEECCCCCCccCeEEEEEEECCCcCCCCCcEEEEecCcee
Confidence 467899999999999999888 78877 4554 9999999999999999999999999999999999999999995 3
Q ss_pred ceec-CCceEeeccCCCCCCCCCCccchhhhhhhhccccc-cCCCCCCCCCChHH
Q 026499 78 GRFM-TQKKLCLSMSDFHPESWNPMWSVSSILTGLLSFMM-DTSPTTGSVNTTTE 130 (237)
Q Consensus 78 ~~v~-~~G~ICl~iL~~~~~~WsP~~~i~~vL~~I~~lL~-~pnp~~~~~~~~~a 130 (237)
++|+ .+|+||+++|+.+ ++|+|+++|++||++|++||. +||++++ .+.++|
T Consensus 104 PNV~~~~G~ICl~iL~~~-~~WsP~~ti~~vL~sI~~ll~~~pn~~~P-~n~eaa 156 (160)
T 2a4d_A 104 NGVNSSNGVVDPRAISVL-AKWQNSYSIKVVLQELRRLMMSKENMKLP-QPPEGQ 156 (160)
T ss_dssp TTBCTTTCBBCGGGSHHH-HTCCTTCCHHHHHHHHHHHHTSTTTTTCC-CCCTTC
T ss_pred CCEECCCCEEehhhcCCc-cCCCccCcHHHHHHHHHHHHccCCCCCCC-CChhhc
Confidence 3476 6999999998643 789999999999999999995 6899987 444443
No 50
>1zuo_A Hypothetical protein LOC92912; ligase, ubiquitin-conjugating enzyme, structural genomics consortium ,SGC; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 2qgx_A
Probab=100.00 E-value=2.5e-34 Score=241.04 Aligned_cols=139 Identities=15% Similarity=0.361 Sum_probs=120.2
Q ss_pred cHHHHHHHHHHHHHHhhCC---CCCEEEEeCCCCceeEEEEEEcC-CCCCCCC-----------cEEEEEEECCCCCCCC
Q 026499 3 EKACVKRLQKEYRALCKEP---VSHVVARPSPNDILEWHYVLEGS-NGTPFAG-----------GYYYGKIKFPPEYPYK 67 (237)
Q Consensus 3 s~~~~kRL~kE~~~l~~~~---~~gi~v~p~~~nl~~W~~~i~GP-~gTpYeg-----------G~f~~~i~fP~~YP~~ 67 (237)
+..+.+||++|+++|++++ +.+|++.+.++|+++|+++|.|| ++|||+| |+|+++|.||++||++
T Consensus 25 s~~a~~RL~kEl~~l~~~~~~~~~~~~~~p~~dnl~~W~~~I~Gp~~~tpy~ggl~~~~~~~g~g~f~l~i~fp~~YP~~ 104 (186)
T 1zuo_A 25 SVQASDRLMKELRDIYRSQSYKTGIYSVELINDSLYDWHVKLQKVDPDSPLHSDLQILKEKEGIEYILLNFSFKDNFPFD 104 (186)
T ss_dssp CHHHHHHHHHHHHHHHTSHHHHTTSEEEEEETTEEEEEEEEECCCCTTSHHHHHHHHHHHHHSCCSEEEEEECCTTTTSS
T ss_pred cHHHHHHHHHHHHHHHhCCCCCCCcEEEEEcCCccceeEEEEECCCCCCCccccchhhccccCceEEEEEEECCCCCCCC
Confidence 3478899999999999988 68899999999999999999998 9999998 8999999999999999
Q ss_pred CCceeecCCCce---ecCCceEeeccCCCCCCCCCCccchhhhhhhhccccccCCCCCCCCCChHHHHHHHHHHHHHhcc
Q 026499 68 PPGILMITPNGR---FMTQKKLCLSMSDFHPESWNPMWSVSSILTGLLSFMMDTSPTTGSVNTTTEEKQRLAKASLAFNC 144 (237)
Q Consensus 68 pP~v~F~tPn~~---v~~~G~ICl~iL~~~~~~WsP~~~i~~vL~~I~~lL~~pnp~~~~~~~~~a~~~~la~~s~~~~~ 144 (237)
||+|+|.||++| |+.+|+||+++|+ +++|+|+++|++||++|++||.+|++.. .|..
T Consensus 105 PP~V~f~tpi~hPnnV~~~G~ICL~iL~--~~~WsP~~ti~~VL~sI~slL~~p~a~~------------------~~~~ 164 (186)
T 1zuo_A 105 PPFVRVVLPVLSGGYVLGGGALCMELLT--KQGWSSAYSIESVIMQINATLVKGKARV------------------QFGA 164 (186)
T ss_dssp CCEEEEEESCEESTTBCGGGBBCCGGGS--TTTCCTTSCHHHHHHHHHHHHHHTTCEE------------------CTTC
T ss_pred CCeEEEeCCccCCCccCCCCcEEeccCC--CCCCCCcCcHHHHHHHHHHHHcCCChhH------------------hhcc
Confidence 999999998653 7789999999995 3789999999999999999999986643 2444
Q ss_pred ChHHHHHHHHHHHHHHh
Q 026499 145 KNPAFRKLFPEYVEKYN 161 (237)
Q Consensus 145 ~~~~f~~~~r~~v~k~a 161 (237)
++..|.+.+++.+.+..
T Consensus 165 ~~~~Y~~~~~~~~~~~~ 181 (186)
T 1zuo_A 165 NKNQYNLARAQQSYNSI 181 (186)
T ss_dssp CTTCCCHHHHHHHHHHH
T ss_pred CHHHHhHHHHHHHHHHH
Confidence 55667766666665554
No 51
>2hlw_A Ubiquitin-conjugating enzyme E2 variant 1; ubiquitin-conjugating enzyme variant, UBC13, HUBC13, polyubiquitination, ligase, signaling protein; NMR {Homo sapiens}
Probab=100.00 E-value=7.9e-34 Score=234.90 Aligned_cols=124 Identities=19% Similarity=0.229 Sum_probs=108.2
Q ss_pred HHHHHHHHHHHHHhhCCCCC-EEEEe-CCCC--ceeEEEEEEcCCCCCCCCcEEEEEEECCCCCCCCCCceeecCC--Cc
Q 026499 5 ACVKRLQKEYRALCKEPVSH-VVARP-SPND--ILEWHYVLEGSNGTPFAGGYYYGKIKFPPEYPYKPPGILMITP--NG 78 (237)
Q Consensus 5 ~~~kRL~kE~~~l~~~~~~g-i~v~p-~~~n--l~~W~~~i~GP~gTpYegG~f~~~i~fP~~YP~~pP~v~F~tP--n~ 78 (237)
.+.+||++|+++|++++++| +.+.+ +++| +++|+++|.||+||||+||+|+++|.||++||++||+|+|.|| |+
T Consensus 35 p~~~RL~kEl~~l~~~~~~g~~~~~~~~~~d~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i~HP 114 (170)
T 2hlw_A 35 PRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKINMN 114 (170)
T ss_dssp CHHHHHHHHHHHHHHCCGGGCEEEEESSTTCSSCCBEEEEECCCSSSTTSSCCBCEEEECCSSCTTSCCEEEECBCCCCS
T ss_pred HHHHHHHHHHHHHHhCCCCCcEEEEecCcccccceeeEEEEeCCCCCCcCCcEEEEEEECCCCCCCCCCeeEEecccccC
Confidence 47899999999999999888 67776 4554 9999999999999999999999999999999999999999995 34
Q ss_pred eec-CCceEeeccCCCCCCCCCCccchhhhhhhhcccccc-CCCCCCCCCChHH
Q 026499 79 RFM-TQKKLCLSMSDFHPESWNPMWSVSSILTGLLSFMMD-TSPTTGSVNTTTE 130 (237)
Q Consensus 79 ~v~-~~G~ICl~iL~~~~~~WsP~~~i~~vL~~I~~lL~~-pnp~~~~~~~~~a 130 (237)
+|+ .+|+||+++|+.+ ++|+|+++|++||++|++||.+ ||++++ .+.++|
T Consensus 115 NV~~~~G~ICl~iL~~~-~~WsP~~ti~~vL~sI~~ll~~~pn~~~P-~n~eaa 166 (170)
T 2hlw_A 115 GVNSSNGVVDPRAISVL-AKWQNSYSIKVVLQELRRLMMSKENMKLP-QPPEGQ 166 (170)
T ss_dssp SBCSSSCBBCTTTCHHH-HTCCSSCCHHHHHHHHHHHHHSTTTSSSC-CCSSCC
T ss_pred CEeCCCCEEEhhhcCCC-CCCCccCcHHHHHHHHHHHHccCCCCCCC-CCcccc
Confidence 476 7999999998643 7899999999999999999975 888887 444443
No 52
>2z6o_A UFM1-conjugating enzyme 1; UFC1, ubiquitin, UBL, polymorphism, UBL conjugation pathway, ligase; 1.60A {Homo sapiens} PDB: 2z6p_A 1ywz_A 2in1_A 2k07_A 3e2g_A 3evx_A
Probab=99.90 E-value=1.7e-25 Score=182.24 Aligned_cols=97 Identities=21% Similarity=0.394 Sum_probs=86.7
Q ss_pred HHHHHHHHHHHHHHhhCCCCCEEEEeCCCCceeEEEEEEcCCCCCCCCc----------EEEEEEECCCCCCCCCCceee
Q 026499 4 KACVKRLQKEYRALCKEPVSHVVARPSPNDILEWHYVLEGSNGTPFAGG----------YYYGKIKFPPEYPYKPPGILM 73 (237)
Q Consensus 4 ~~~~kRL~kE~~~l~~~~~~gi~v~p~~~nl~~W~~~i~GP~gTpYegG----------~f~~~i~fP~~YP~~pP~v~F 73 (237)
..+.+||++|++.|++ ++.+..+|+.+|++++.||+||+|+|| .|++++.||++||++||+|+|
T Consensus 31 ~~w~~RL~eE~k~L~k------~v~p~k~n~~~W~~ii~Gp~gT~WeGgcw~~~~~~~y~F~L~~~fPe~YP~~PPeV~F 104 (172)
T 2z6o_A 31 ELWVQRLKEEYQSLIR------YVENNKNADNDWFRLESNKEGTRWFGKCWYIHDLLKYEFDIEFDIPITYPTTAPEIAV 104 (172)
T ss_dssp HHHHHHHHHHHHHHHH------HHHHHHHTTCCCEEEEECTTSCEEEEEEEEEETTEEEEEEEEEECCTTTTTSCCCCBC
T ss_pred HHHHHHHHHHHHHHHH------HhccCccccceeEEeecCCCCCcccCcccccccccceEEEEEEECCCCCCCCCCeeee
Confidence 3579999999999998 467778899999999999999999999 999999999999999999999
Q ss_pred cCC---CceecCCceEeeccCCCCCC---CCCCccchhhhh
Q 026499 74 ITP---NGRFMTQKKLCLSMSDFHPE---SWNPMWSVSSIL 108 (237)
Q Consensus 74 ~tP---n~~v~~~G~ICl~iL~~~~~---~WsP~~~i~~vL 108 (237)
.++ |.++|.+|+|||++|. ++ .|+|+++|.++|
T Consensus 105 ~~~~~~hpnmY~~G~ICLdIL~--kp~Ws~~~P~~~IahiL 143 (172)
T 2z6o_A 105 PELDGKTAKMYRGGKICLTDHF--KPLWARNVPKFGLAHLM 143 (172)
T ss_dssp GGGTTTCSSBCTTSBBCCCTTH--HHHHHHHTTSCCHHHHH
T ss_pred CCCCCCCCCCCCCCcEechhhc--cccccccCCccCHHHHH
Confidence 884 5568999999999983 24 455999999998
No 53
>3kpa_A Probable ubiquitin fold modifier conjugating ENZY; UBL conjugation pathway, ligase, structural genomics, PSI; 2.20A {Leishmania major} SCOP: d.20.1.4
Probab=99.69 E-value=3.2e-18 Score=136.66 Aligned_cols=87 Identities=22% Similarity=0.478 Sum_probs=74.1
Q ss_pred HHHHHHHHHHHHHHhhCCCCCEEEEeCCCCceeEEEEEEcCCCCCCCCc----------EEEEEEECCCCCCCCCCceee
Q 026499 4 KACVKRLQKEYRALCKEPVSHVVARPSPNDILEWHYVLEGSNGTPFAGG----------YYYGKIKFPPEYPYKPPGILM 73 (237)
Q Consensus 4 ~~~~kRL~kE~~~l~~~~~~gi~v~p~~~nl~~W~~~i~GP~gTpYegG----------~f~~~i~fP~~YP~~pP~v~F 73 (237)
..+..||..||..|.+ ++.-+.++-.+|...+.||+||+|+|+ .|.+++.||.+||+.||.|+|
T Consensus 33 ~~w~~RlkeEy~alI~------yv~~nK~~d~dWf~~~sn~~GT~W~G~cw~~~~~~kyeFkLefdiP~tYP~tPPeI~F 106 (168)
T 3kpa_A 33 DKWTARLKEEYASLIT------YVEHNKASDSHWFHLESNPQGTRWYGTCWTYYKNEKYEFEMNFDIPVTYPQAPPEIAL 106 (168)
T ss_dssp HHHHHHHHHHHHHHHH------HHHHHHHTTCCCEEEEECTTSCEEEEEEEEEETTEEEEEEEEEECCTTTTTSCCCCBC
T ss_pred HHHHHHHHHHHHHHHH------HHHhcccccCCeeeecCCCCCCcccCccceeeccceeEEEEEEeCCccCCCCCCEeec
Confidence 4689999999999987 555555556689999999999999999 899999999999999999999
Q ss_pred cCC---CceecCCceEeeccCCCCCCCCCCcc
Q 026499 74 ITP---NGRFMTQKKLCLSMSDFHPESWNPMW 102 (237)
Q Consensus 74 ~tP---n~~v~~~G~ICl~iL~~~~~~WsP~~ 102 (237)
.++ +.++|.+|+|||+++ |+|.+
T Consensus 107 p~ldgkt~kmYr~GkICLdIh------wkPlW 132 (168)
T 3kpa_A 107 PELEGKTVKMYRGGKICMTTH------FFPLW 132 (168)
T ss_dssp GGGTTTCSSEETTTEECCCTT------HHHHH
T ss_pred ccccCcCccccCCCcEEeccc------cchhh
Confidence 983 344899999999873 66544
No 54
>3r3q_A Suppressor protein STP22 of temperature-sensitive factor receptor and arginine permease...; endosomal sorting, ESCRT-I; 1.45A {Saccharomyces cerevisiae} SCOP: d.20.1.2 PDB: 3r42_A 1uzx_A*
Probab=99.67 E-value=6.3e-17 Score=132.29 Aligned_cols=112 Identities=15% Similarity=0.204 Sum_probs=89.3
Q ss_pred HHHHHHHHHHHhhC-CC--CCEEEEeCCCCceeEEEEEEcCCCCCCCCcE---EEEEEECCCCCCCCCCceeecCC----
Q 026499 7 VKRLQKEYRALCKE-PV--SHVVARPSPNDILEWHYVLEGSNGTPFAGGY---YYGKIKFPPEYPYKPPGILMITP---- 76 (237)
Q Consensus 7 ~kRL~kE~~~l~~~-~~--~gi~v~p~~~nl~~W~~~i~GP~gTpYegG~---f~~~i~fP~~YP~~pP~v~F~tP---- 76 (237)
.+|..+|+..+.+. +. +...+...+|...++-+.+.|.-.++|+||. |.+.|.||.+||++||.|.|.++
T Consensus 30 ~~~~~~dv~~~l~~yp~L~p~t~~yt~~dG~~~~Ll~l~Gtipv~y~g~~~Yn~pi~IwlP~~YP~~PP~v~v~p~t~~m 109 (162)
T 3r3q_A 30 GRTTFHDSLALLDNFHSLRPRTRVFTHSDGTPQLLLSIYGTISTGEDGSSPHSIPVIMWVPSMYPVKPPFISINLENFDM 109 (162)
T ss_dssp HHHHHHHHHHHHHHCTTEEEEEEEEECTTSCEEEEEEEEEEEECSCCTTSCCEEEEEEECCTTTTTSCCEEEECGGGCCT
T ss_pred hhHHHHHHHHHHHhCCCCceeeeeEEcCCCChheEEEEECccCccccCcccccccEEEEeCcccCCCCCEEEEECCCccc
Confidence 35677788777653 21 2223344567777777788887779999999 88999999999999999977541
Q ss_pred ---------CceecCCceEeeccCCCCCCCCCC-ccchhhhhhhhccccccCCCCC
Q 026499 77 ---------NGRFMTQKKLCLSMSDFHPESWNP-MWSVSSILTGLLSFMMDTSPTT 122 (237)
Q Consensus 77 ---------n~~v~~~G~ICl~iL~~~~~~WsP-~~~i~~vL~~I~~lL~~pnp~~ 122 (237)
|.||+.+|+||+++| .+|+| +.+|.++|.+|+++|.+|||+.
T Consensus 110 ~~~~~~I~~hpnVD~~G~I~lpyL----~~W~p~~s~L~~ll~~l~~lf~ep~~d~ 161 (162)
T 3r3q_A 110 NTISSSLPIQEYIDSNGWIALPIL----HAWDPAAMNLIMVVQELMSLLHEPPQDQ 161 (162)
T ss_dssp TTSCTTSTHHHHBCTTSBBCCGGG----GSCCGGGCCHHHHHHHHHHTTSCCCCCC
T ss_pred cccccccCCCCCCCCCCcEeCccc----ccCCCCcCcHHHHHHHHHHHhcCCCCCC
Confidence 456899999999999 46999 6899999999999999999975
No 55
>3obq_A Tumor susceptibility gene 101 protein; protein transprot, ubiquitin binding, protein transport; 1.40A {Homo sapiens} SCOP: d.20.1.2 PDB: 3obs_A 3obu_A 3obx_A 3p9g_A* 3p9h_A* 2f0r_A 1kpp_A 1kpq_A 1m4p_A 1m4q_A 1s1q_A
Probab=99.24 E-value=3.5e-12 Score=102.46 Aligned_cols=81 Identities=17% Similarity=0.417 Sum_probs=69.7
Q ss_pred CCCceeEEEEEEcCCCCCCCCcEEEE--EEECCCCCCCCCCceeecCC--------CceecCCceEeeccCCCCCCCCCC
Q 026499 31 PNDILEWHYVLEGSNGTPFAGGYYYG--KIKFPPEYPYKPPGILMITP--------NGRFMTQKKLCLSMSDFHPESWNP 100 (237)
Q Consensus 31 ~~nl~~W~~~i~GP~gTpYegG~f~~--~i~fP~~YP~~pP~v~F~tP--------n~~v~~~G~ICl~iL~~~~~~WsP 100 (237)
..+++.|.++|. .+|+|+.|.+ .|-||.+||++||.| |.+| |.||+.+|+||+++|+ +|++
T Consensus 50 ~~~LL~l~GtIp----v~y~g~~y~iPi~Iwlp~~YP~~pP~v-fv~pt~~m~I~~~~~Vd~~G~i~lpyL~----~W~~ 120 (146)
T 3obq_A 50 SRELMNLTGTIP----VPYRGNTYNIPICLWLLDTYPYNPPIC-FVKPTSSMTIKTGKHVDANGKIYLPYLH----EWKH 120 (146)
T ss_dssp TCEEEEEEEEEE----EECSSCEEEEEEEEECCTTTTTSCCEE-EECCCTTEEECCBTTBCTTCBBCCHHHH----TCCT
T ss_pred hheEEEEEEEee----eeecCccccceEEEEeCccCCCCCCEE-EEeCCCCCEECCCCCCCCCCCEeccccc----ccCC
Confidence 468999999998 6899999985 899999999999999 6553 5568999999999994 5988
Q ss_pred -ccchhhhhhhhccccccCCC
Q 026499 101 -MWSVSSILTGLLSFMMDTSP 120 (237)
Q Consensus 101 -~~~i~~vL~~I~~lL~~pnp 120 (237)
..+|.+++..++++|.+.-|
T Consensus 121 ~~snL~~ll~~l~~~F~~epP 141 (146)
T 3obq_A 121 PQSDLLGLIQVMIVVFGDEPP 141 (146)
T ss_dssp TTCCHHHHHHHHHHHHHHSCS
T ss_pred CCCCHHHHHHHHHHHHhhCCC
Confidence 78999999999999976533
No 56
>2ebm_A RWD domain-containing protein 1; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.57 E-value=0.042 Score=41.81 Aligned_cols=68 Identities=12% Similarity=0.082 Sum_probs=43.6
Q ss_pred HHHHHHHHHHHHhhCCCCCEEEEeCCCCceeEEEEEEcCCCCCCCCcEEEEEEECCCCCCCCCCceeecC
Q 026499 6 CVKRLQKEYRALCKEPVSHVVARPSPNDILEWHYVLEGSNGTPFAGGYYYGKIKFPPEYPYKPPGILMIT 75 (237)
Q Consensus 6 ~~kRL~kE~~~l~~~~~~gi~v~p~~~nl~~W~~~i~GP~gTpYegG~f~~~i~fP~~YP~~pP~v~F~t 75 (237)
...+...|+..|..-=+..+.+. .+....+.+.|..-.|..-+.-.+.+.|.||++||..||.|.+.+
T Consensus 11 ~~e~q~~EleaL~sIy~d~~~~~--~~~~~~~~i~i~~~~~~~~~~~~~~L~v~~p~~YP~~~P~i~l~~ 78 (128)
T 2ebm_A 11 YGEEQRNELEALESIYPDSFTVL--SENPPSFTITVTSEAGENDETVQTTLKFTYSEKYPDEAPLYEIFS 78 (128)
T ss_dssp HHHHHHHHHHHHHHHCSSSEEEC--CSSSCEEEECCBCCCCTTSCCCBEEEEEECCSSTTTSCCEEEEEE
T ss_pred hHHHHHHHHHHHHHHccCceEEc--cCCCCEEEEEEecCCCCCcCceeEEEEEEeCCCCCCCCceEEEEc
Confidence 34567789999886433445442 222355666665322222233478999999999999999987544
No 57
>2yz0_A Serine/threonine-protein kinase GCN2; A-B-B-B-B-A-A, amino acid starvation signal response, EIF2alpha kinase, transferase; NMR {Saccharomyces cerevisiae}
Probab=94.97 E-value=0.2 Score=38.57 Aligned_cols=69 Identities=13% Similarity=0.136 Sum_probs=43.5
Q ss_pred HHHHHHHHHHHHhhCCCCCEEEEeCC------CCceeEEEEEEcCCCCCCCCcEEEEEEECCCCCCCCCCceeecC
Q 026499 6 CVKRLQKEYRALCKEPVSHVVARPSP------NDILEWHYVLEGSNGTPFAGGYYYGKIKFPPEYPYKPPGILMIT 75 (237)
Q Consensus 6 ~~kRL~kE~~~l~~~~~~gi~v~p~~------~nl~~W~~~i~GP~gTpYegG~f~~~i~fP~~YP~~pP~v~F~t 75 (237)
...+-..|+..|..--+..+.+.... +....+.+.|....+ .-..-.+.+.+.+|++||..||.|.+.+
T Consensus 11 ~~e~q~~EleaL~SIY~d~~~~~~~~~~~~~~~~~~~f~I~l~~~~~-~~~~~~~~L~~~~p~~YP~~~P~i~l~~ 85 (138)
T 2yz0_A 11 YYEIQCNELEAIRSIYMDDFTDLTKRKSSWDKQPQIIFEITLRSVDK-EPVESSITLHFAMTPMYPYTAPEIEFKN 85 (138)
T ss_dssp HHHHHHHHHHHHHTTSSSSEECCSTTSSSSCSSCCSCEEEEEECSSC-SSCCCEEEEEEECCSSTTSSCCEEEEEC
T ss_pred hHHHHHHHHHHHHHHChhhheecccccccccCCCCcEEEEEEecCCC-CCCceEEEEEEECCCCCCCCCCeEEEec
Confidence 34556788888876433344332111 124567777774332 1123478899999999999999998654
No 58
>2day_A Ring finger protein 25; ligase, metal-binding, UB1 conjugation, UB1 conjugation pathway, RWD domain, alpha+beta sandwich fold, structural genomics; NMR {Homo sapiens} SCOP: d.20.1.3 PDB: 2dmf_A
Probab=94.81 E-value=0.13 Score=39.11 Aligned_cols=68 Identities=16% Similarity=0.106 Sum_probs=42.5
Q ss_pred HHHHHHHHHHhhCCCCCEEEEeCC--CCceeEEEEEEcCCCCCC--CCcEEEEEEECCCCCCCCCCceeecC
Q 026499 8 KRLQKEYRALCKEPVSHVVARPSP--NDILEWHYVLEGSNGTPF--AGGYYYGKIKFPPEYPYKPPGILMIT 75 (237)
Q Consensus 8 kRL~kE~~~l~~~~~~gi~v~p~~--~nl~~W~~~i~GP~gTpY--egG~f~~~i~fP~~YP~~pP~v~F~t 75 (237)
.+...|+..|..-=+..+.+.... .+...+.+.|..+.+..- ..-.+.+.|.||++||..+|.|...+
T Consensus 11 e~~~~EleaL~SIY~de~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~L~~~~p~~YP~~~P~i~~~~ 82 (128)
T 2day_A 11 WVLPSEVEVLESIYLDELQVIKGNGRTSPWEIYITLHPATAEDQDSQYVCFTLVLQVPAEYPHEVPQISIRN 82 (128)
T ss_dssp CHHHHHHHHHHHHSTTTEEEECCTTSSCCEEEEEEECCSCCSSSSCCCCEEEEEEEECSSTTSSCCEEEEEE
T ss_pred HHHHHHHHHHHHHCCCceEEecCCCCCCCeEEEEEEecCCCCCccccceeEEEEEEcCCCCCCCCCCeEEEc
Confidence 357789988887434455443221 234455556653322111 12478899999999999999998665
No 59
>3zqs_A E3 ubiquitin-protein ligase fancl; HET: P6G; 2.00A {Homo sapiens}
Probab=92.59 E-value=0.31 Score=40.07 Aligned_cols=83 Identities=22% Similarity=0.261 Sum_probs=59.1
Q ss_pred HHHHHHHHHhhCCCCCEEEEeCCCCceeEEEEEEcCCCCCCCCcEEEEEEECCCCCCCCCCceeecCCCceecCCceEee
Q 026499 9 RLQKEYRALCKEPVSHVVARPSPNDILEWHYVLEGSNGTPFAGGYYYGKIKFPPEYPYKPPGILMITPNGRFMTQKKLCL 88 (237)
Q Consensus 9 RL~kE~~~l~~~~~~gi~v~p~~~nl~~W~~~i~GP~gTpYegG~f~~~i~fP~~YP~~pP~v~F~tPn~~v~~~G~ICl 88 (237)
+|.+|+.+|==+. +.-.+.++....+.+..-. |....+.|.++.+||.++|.+...-|.. +
T Consensus 5 ~li~Ei~~iGW~~-----l~~id~~~~~i~l~~~D~~-----gR~H~l~v~l~~~yp~~~P~~~~DlP~~-~-------- 65 (186)
T 3zqs_A 5 SLIEEIGTLGWDK-----LVYADTCFSTIKLKAEDAS-----GREHLITLKLKAKYPAESPDYFVDFPVP-F-------- 65 (186)
T ss_dssp SHHHHHHHHCGGG-----EEEECTTSSEEEEEEECTT-----SCEEEEEEECCTTTTTSCCEEECCCSSC-C--------
T ss_pred HHHHHHHHhCCce-----eeeecCCccEEEEEEEeCC-----CCeEEEEEEECCCCCCCCCeeEEcCCCC-c--------
Confidence 5778888872211 2223467888888888444 5789999999999999999887655642 1
Q ss_pred ccCCCCCCCCCCccchhhhhhhhccccc
Q 026499 89 SMSDFHPESWNPMWSVSSILTGLLSFMM 116 (237)
Q Consensus 89 ~iL~~~~~~WsP~~~i~~vL~~I~~lL~ 116 (237)
. -.|+|..+|.+++...+..|.
T Consensus 66 ---~---~~w~~~ssL~~v~~qF~~~Le 87 (186)
T 3zqs_A 66 ---C---ASWTPQSSLISIYSQFLAAIE 87 (186)
T ss_dssp ---C---CCCCTTCCHHHHHHHHHHHHH
T ss_pred ---c---cccCCCccHHHHHHHHHHHHH
Confidence 1 469988888888877766553
No 60
>2ebk_A RWD domain-containing protein 3; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=91.11 E-value=0.45 Score=36.01 Aligned_cols=66 Identities=18% Similarity=0.068 Sum_probs=39.9
Q ss_pred HHHHHHHHHhhC-C-CCCEEE-EeCCCCceeEEEEEEcCCCCCCCCcEEEEEEECCCCCCCCCCceeecC
Q 026499 9 RLQKEYRALCKE-P-VSHVVA-RPSPNDILEWHYVLEGSNGTPFAGGYYYGKIKFPPEYPYKPPGILMIT 75 (237)
Q Consensus 9 RL~kE~~~l~~~-~-~~gi~v-~p~~~nl~~W~~~i~GP~gTpYegG~f~~~i~fP~~YP~~pP~v~F~t 75 (237)
+...|+..|..- + +..+.+ .....+...+.+.|....+. =..-.+.+.|.+|.+||..||.|...+
T Consensus 11 ~q~~EleaL~SIy~d~~e~~~~~~~~~~~~~f~i~l~~~~~~-~~~~~~~L~~~~p~~YP~~~P~i~l~~ 79 (128)
T 2ebk_A 11 PVQEELSVLAAIFCRPHEWEVLSRSETDGTVFRIHTKAEGFM-DADIPLELVFHLPVNYPSCLPGISINS 79 (128)
T ss_dssp HHHHHHHHHHHHHCCTTTCCCSEECSSSCEEEEEEEECCTTT-TCCCEEEEEEEECSSTTSSCCCCCCCC
T ss_pred HHHHHHHHHHHHcCCCCceEEecCCCCCCCeEEEEecCCCCC-CCCeEEEEEEECCCCCCCCCCeEEEEh
Confidence 356788888762 1 112322 11122345777777632211 012478999999999999999987554
No 61
>1ukx_A GCN2, GCN2 EIF2alpha kinase; UBC-like fold, triple beta-turns, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.20.1.3
Probab=90.79 E-value=1.2 Score=33.79 Aligned_cols=67 Identities=24% Similarity=0.163 Sum_probs=40.9
Q ss_pred HHHHHHHHHHHhhCCCCCEEEEeCCC-----CceeEEEEEEcCCCCC-C-CCcEEEEEEECCCCCCCCCCceeec
Q 026499 7 VKRLQKEYRALCKEPVSHVVARPSPN-----DILEWHYVLEGSNGTP-F-AGGYYYGKIKFPPEYPYKPPGILMI 74 (237)
Q Consensus 7 ~kRL~kE~~~l~~~~~~gi~v~p~~~-----nl~~W~~~i~GP~gTp-Y-egG~f~~~i~fP~~YP~~pP~v~F~ 74 (237)
..+...|+..|..-=+..+.+..... ....+.+.|. |.+.- - ..-.+.+.|.||++||..+|.|.+.
T Consensus 12 ~e~q~~EleaL~SIY~d~~~~~~~~~~~~~~~~~~~~i~l~-~~~~~~~~~~~~~~L~v~~p~~YP~~~P~i~l~ 85 (137)
T 1ukx_A 12 SQRQDHELQALEAIYGSDFQDLRPDARGRVREPPEINLVLY-PQGLAGEEVYVQVELRVKCPPTYPDVVPEIDLK 85 (137)
T ss_dssp HHHHHHHHHHHHHHTSSSEEECCCCCSSSCCCCCCEEEEEC-CTTSCSSSCSCEEEEEECCCTTTTSSCCCCEEE
T ss_pred HHHHHHHHHHHHHHCcccceeccCcccCccCCCcEEEEEEe-cCCcCCcccceEEEEEEECCCCCCCCCCcEEEe
Confidence 45677888888763334454422111 1345556665 32210 0 1246899999999999999998764
No 62
>2daw_A RWD domain containing protein 2; alpha+beta sandwich fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.20.1.3
Probab=88.45 E-value=1.4 Score=34.61 Aligned_cols=67 Identities=15% Similarity=0.120 Sum_probs=39.9
Q ss_pred HHHHHHHHHHHHHhhCCC--CCEEEEeC--------------CC--CceeEEEEEEcCCCCCCCCcEEEEEEECCCCCCC
Q 026499 5 ACVKRLQKEYRALCKEPV--SHVVARPS--------------PN--DILEWHYVLEGSNGTPFAGGYYYGKIKFPPEYPY 66 (237)
Q Consensus 5 ~~~kRL~kE~~~l~~~~~--~gi~v~p~--------------~~--nl~~W~~~i~GP~gTpYegG~f~~~i~fP~~YP~ 66 (237)
....+-..|+..|..-=+ ..+.+.-. .+ ..+.+.+.|.-. + + ...+.++|.+|.+||.
T Consensus 14 ~~~e~Q~eElEaL~SIY~~~de~~v~d~~~~~~l~~~~~~~~~~~p~~~~~~i~l~~~-~-~--~~~i~L~v~lP~~YP~ 89 (154)
T 2daw_A 14 ESLQLQLLEMEMLFSMFPNQGEVKLEDVNALTNIKRYLEGTREALPPKIEFVITLQIE-E-P--KVKIDLQVTMPHSYPY 89 (154)
T ss_dssp HHHHHHHHHHHHHHHHCCSTTSEEESCGGGTHHHHHHHHTSCCSCCCCEEEEEEEEET-T-T--TEEEEEEEEECSSTTS
T ss_pred hhHHHHHHHHHHHHHhCCCCCeEEEeccchHHHHHHhhcccccCCCCceEEEEEEecC-C-C--CceEEEEEEcCCCCCC
Confidence 445566778888876322 34554210 01 113455444322 1 1 1379999999999999
Q ss_pred CCCceeecC
Q 026499 67 KPPGILMIT 75 (237)
Q Consensus 67 ~pP~v~F~t 75 (237)
.+|.|...+
T Consensus 90 ~~P~i~l~~ 98 (154)
T 2daw_A 90 LALQLFGRS 98 (154)
T ss_dssp SCCEEEEEC
T ss_pred CCCcEEEEe
Confidence 999987554
No 63
>2dax_A Protein C21ORF6; RWD domain, alpha+beta sandwich fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.20.1.3
Probab=86.62 E-value=0.88 Score=35.56 Aligned_cols=23 Identities=22% Similarity=0.311 Sum_probs=20.3
Q ss_pred EEEEEEECCCCCCCCCCceeecC
Q 026499 53 YYYGKIKFPPEYPYKPPGILMIT 75 (237)
Q Consensus 53 ~f~~~i~fP~~YP~~pP~v~F~t 75 (237)
.+.+.|.+|.+||..||.|....
T Consensus 74 ~l~L~v~lP~~YP~~~P~i~l~~ 96 (152)
T 2dax_A 74 MFSLACILPFKYPAVLPEITVRS 96 (152)
T ss_dssp EEEEEEEECSSTTSSCCCCEEEC
T ss_pred eEEEEEECCCCCCCCCCeEEEEc
Confidence 68899999999999999997554
No 64
>3u3c_B Paxillin LD2 peptide; 4-helix bundle, focal adhesion, tyrosine kinase, transferase-signaling protein complex; 3.70A {Homo sapiens}
Probab=44.06 E-value=22 Score=19.05 Aligned_cols=21 Identities=29% Similarity=0.310 Sum_probs=17.8
Q ss_pred HHHHHHHHHHHHHhhCCCCCE
Q 026499 5 ACVKRLQKEYRALCKEPVSHV 25 (237)
Q Consensus 5 ~~~kRL~kE~~~l~~~~~~gi 25 (237)
.-+.||.-|+...+.+|+.|.
T Consensus 5 seldrlllelnavqhnppsg~ 25 (26)
T 3u3c_B 5 SELDRLLLELNAVQHNPPSGX 25 (26)
T ss_pred HHHHHHHHHHhhhccCCCCCC
Confidence 457899999999999998874
No 65
>1cn3_F Fragment of coat protein VP2; viral coat protein VP1, viral coat protein VP2, viral entry, viral protein; 2.20A {Polyomavirus}
Probab=42.97 E-value=4.3 Score=22.36 Aligned_cols=15 Identities=40% Similarity=1.068 Sum_probs=11.7
Q ss_pred CCchHHHHHHHHHHH
Q 026499 213 SFPTWMLLLLVSIFG 227 (237)
Q Consensus 213 ~~~~~~~~~~~~~~~ 227 (237)
.-|.||+-|++++.|
T Consensus 15 vtpdwmlplilglyg 29 (29)
T 1cn3_F 15 VTPDWMLPLILGLYG 29 (29)
T ss_dssp CEEGGGHHHHHHTTC
T ss_pred cCchhhHHHHHhccC
Confidence 469999999887653
No 66
>3rls_A YAF9, protein AF-9 homolog; yeats domain, histone, transcription; 1.70A {Saccharomyces cerevisiae} PDB: 3fk3_A
Probab=30.35 E-value=93 Score=24.94 Aligned_cols=49 Identities=14% Similarity=0.162 Sum_probs=34.9
Q ss_pred CCceeEEEEEEcCCCCCCCCcEEEEEEECCCCCCCCCCceeecCCCceecC
Q 026499 32 NDILEWHYVLEGSNGTPFAGGYYYGKIKFPPEYPYKPPGILMITPNGRFMT 82 (237)
Q Consensus 32 ~nl~~W~~~i~GP~gTpYegG~f~~~i~fP~~YP~~pP~v~F~tPn~~v~~ 82 (237)
+..++|.+-+.|+.|.--..-+=++...+.+.||. |.-.+..|-..+..
T Consensus 30 ~~TH~WtVyVr~~~~edis~~v~KV~F~LHpSF~n--p~Rvv~~PPFevtE 78 (175)
T 3rls_A 30 EHTHLWTIFVRGPQNEDISYFIKKVVFKLHDTYPN--PVRSIEAPPFELTE 78 (175)
T ss_dssp TCCEEEEEEEECGGGCCCTTTEEEEEEECCTTSSS--CEEEECSSSEEEEE
T ss_pred CCcEEEEEEEECCCCCChhheEEEEEEEcCCCCCC--CcEEEeCCCCEEEE
Confidence 46789999999988764444566788889999975 66666665433333
No 67
>3qrl_A Transcription initiation factor TFIID subunit 14; yeats domain, IG fold, nucleus, nuclear protein; HET: PGE; 1.70A {Saccharomyces cerevisiae} PDB: 2l7e_A
Probab=27.07 E-value=1e+02 Score=23.82 Aligned_cols=42 Identities=17% Similarity=0.343 Sum_probs=31.2
Q ss_pred ceeEE--EEEEcCCCCCCC-CcEEEEEEECCCCCCCCCCceeecCCC
Q 026499 34 ILEWH--YVLEGSNGTPFA-GGYYYGKIKFPPEYPYKPPGILMITPN 77 (237)
Q Consensus 34 l~~W~--~~i~GP~gTpYe-gG~f~~~i~fP~~YP~~pP~v~F~tPn 77 (237)
+..|. +.+.|+.|.... .-+=++...+-+.|+. |...+..|-
T Consensus 32 ~h~WtieV~vr~~~g~ei~~~~i~kV~f~LH~sF~n--p~r~v~~pP 76 (140)
T 3qrl_A 32 VRQWSIEIVLLDDEGKEIPATIFDKVIYHLHPTFAN--PNRTFTDPP 76 (140)
T ss_dssp CEEEEEEEEEECTTSCEECCTTEEEEEEECCTTSSS--CEEEECSTT
T ss_pred ccEeeEEEEEeCCCCCcCchheEEEEEEEeCCCCCC--CeEEEcCCC
Confidence 47998 889999988654 3455677888888874 777777754
No 68
>1skh_A Major prion protein 2; coil-helix-coil, unknown function; NMR {Bos taurus}
Probab=24.55 E-value=53 Score=18.63 Aligned_cols=14 Identities=29% Similarity=0.961 Sum_probs=10.7
Q ss_pred CchHHHHHHHHHHH
Q 026499 214 FPTWMLLLLVSIFG 227 (237)
Q Consensus 214 ~~~~~~~~~~~~~~ 227 (237)
.--|+++|||+.-.
T Consensus 6 ~~cwilvLfva~ws 19 (30)
T 1skh_A 6 IGSWILVLFVAMWS 19 (30)
T ss_dssp TTTHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHh
Confidence 45699999998643
No 69
>3hd7_B Syntaxin-1A; membrane protein, coiled-coil, 4-helical bundle, cell juncti cytoplasmic vesicle, membrane, phosphoprotein; HET: GGG; 3.40A {Rattus norvegicus} PDB: 3hd9_B 3ipd_B
Probab=22.57 E-value=31 Score=25.22 Aligned_cols=19 Identities=26% Similarity=0.478 Sum_probs=13.9
Q ss_pred CchHHHHHHHHHHHHHHhh
Q 026499 214 FPTWMLLLLVSIFGIVMAL 232 (237)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~ 232 (237)
...|+.++++-|+++|.|+
T Consensus 84 kk~~i~l~~~~i~~~i~~~ 102 (109)
T 3hd7_B 84 RKKIMIIICCVILGIIIAS 102 (109)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred CcceehHHHHHHHHHHHHH
Confidence 3458888877888877765
No 70
>2ccv_A Helix pomatia agglutinin; lectin, snail; HET: A2G NAG; 1.30A {Helix pomatia} SCOP: b.154.1.1 PDB: 2cgy_A* 2cgz_A* 2ce6_A
Probab=20.89 E-value=81 Score=22.66 Aligned_cols=23 Identities=26% Similarity=0.398 Sum_probs=18.3
Q ss_pred cEEEEEEECCCCCCCCCCceeecC
Q 026499 52 GYYYGKIKFPPEYPYKPPGILMIT 75 (237)
Q Consensus 52 G~f~~~i~fP~~YP~~pP~v~F~t 75 (237)
..+...|.|+..|+. +|+|.+.-
T Consensus 29 R~~~~~V~F~~~F~~-~P~V~v~l 51 (101)
T 2ccv_A 29 RELAKNITFASPYCR-PPVVLLSI 51 (101)
T ss_dssp EEEEEEEECSSCCSS-CCEEEEEE
T ss_pred eEEEEEeEeCcccCC-CCEEEEEe
Confidence 467888999999985 88887554
Done!