Your job contains 1 sequence.
>026500
MALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMK
DVPTYLPEKTILPCNLQREDVRDAFISLSAASLAELPAGSIVGTASLRRKSQILHRYPSL
KVMENFRGNVQTRLRKLNERVVQATLLALAGLKRLSMTENVTNILSVDDMLPAVAQGAIG
IACRSNDEKMVPFTTHSQASILNTFNCSGKLCYKLHFGFLNLVELRRIIAACLMAGH
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 026500
(237 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2150758 - symbol:HEMC "hydroxymethylbilane syn... 760 2.1e-75 1
TIGR_CMR|SPO_3649 - symbol:SPO_3649 "porphobilinogen deam... 482 6.2e-46 1
UNIPROTKB|P06983 - symbol:hemC species:83333 "Escherichia... 417 4.8e-39 1
TIGR_CMR|CHY_1208 - symbol:CHY_1208 "porphobilinogen deam... 390 3.5e-36 1
TIGR_CMR|BA_4696 - symbol:BA_4696 "porphobilinogen deamin... 384 1.5e-35 1
TIGR_CMR|CJE_0649 - symbol:CJE_0649 "porphobilinogen deam... 367 9.5e-34 1
TIGR_CMR|ECH_0701 - symbol:ECH_0701 "porphobilinogen deam... 366 1.2e-33 1
CGD|CAL0000854 - symbol:HEM3 species:5476 "Candida albica... 363 2.5e-33 1
UNIPROTKB|O94048 - symbol:HEM3 "Porphobilinogen deaminase... 363 2.5e-33 1
TIGR_CMR|APH_0746 - symbol:APH_0746 "porphobilinogen deam... 357 1.1e-32 1
ZFIN|ZDB-GENE-040426-1375 - symbol:hmbsa "hydroxymethylbi... 355 1.8e-32 1
DICTYBASE|DDB_G0284697 - symbol:hemC "porphobilinogen dea... 340 6.9e-31 1
UNIPROTKB|Q2KIN5 - symbol:HMBS "Porphobilinogen deaminase... 338 1.1e-30 1
UNIPROTKB|F1NKN8 - symbol:HMBS "Uncharacterized protein" ... 337 1.4e-30 1
ZFIN|ZDB-GENE-050522-491 - symbol:hmbsb "hydroxymethylbil... 337 1.4e-30 1
FB|FBgn0010786 - symbol:l(3)02640 "lethal (3) 02640" spec... 344 1.4e-30 1
UNIPROTKB|E2RTD6 - symbol:HMBS "Uncharacterized protein" ... 336 1.8e-30 1
UNIPROTKB|P08397 - symbol:HMBS "Porphobilinogen deaminase... 336 1.8e-30 1
UNIPROTKB|F6Q2D2 - symbol:HMBS "Uncharacterized protein" ... 332 4.9e-30 1
RGD|2801 - symbol:Hmbs "hydroxymethylbilane synthase" spe... 332 4.9e-30 1
MGI|MGI:96112 - symbol:Hmbs "hydroxymethylbilane synthase... 331 6.2e-30 1
UNIPROTKB|Q5M893 - symbol:Hmbs "Hydroxymethylbilane synth... 329 1.0e-29 1
SGD|S000002364 - symbol:HEM3 "Porphobilinogen deaminase" ... 318 1.5e-28 1
GENEDB_PFALCIPARUM|PFL0480w - symbol:PFL0480w "porphobili... 199 1.4e-27 2
UNIPROTKB|Q8I5V3 - symbol:PBGD "Porphobilinogen deaminase... 199 1.4e-27 2
UNIPROTKB|G3V1P4 - symbol:HMBS "Hydroxymethylbilane synth... 302 7.3e-27 1
UNIPROTKB|G5EA58 - symbol:HMBS "Porphobilinogen deaminase... 302 7.3e-27 1
ASPGD|ASPL0000052688 - symbol:hemC species:162425 "Emeric... 301 9.4e-27 1
UNIPROTKB|F5H345 - symbol:HMBS "Porphobilinogen deaminase... 290 1.4e-25 1
TIGR_CMR|NSE_0385 - symbol:NSE_0385 "putative porphobilin... 288 2.2e-25 1
UNIPROTKB|P64336 - symbol:hemC "Porphobilinogen deaminase... 287 2.9e-25 1
UNIPROTKB|F5GY90 - symbol:HMBS "Porphobilinogen deaminase... 284 5.9e-25 1
UNIPROTKB|G4N2C1 - symbol:MGG_04860 "Porphobilinogen deam... 277 3.3e-24 1
POMBASE|SPAC24B11.13 - symbol:hem3 "hydroxymethylbilane s... 271 1.4e-23 1
UNIPROTKB|F5H226 - symbol:HMBS "Porphobilinogen deaminase... 154 3.5e-11 1
UNIPROTKB|F5H0P4 - symbol:HMBS "Porphobilinogen deaminase... 146 2.5e-10 1
>TAIR|locus:2150758 [details] [associations]
symbol:HEMC "hydroxymethylbilane synthase" species:3702
"Arabidopsis thaliana" [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0018160 "peptidyl-pyrromethane cofactor linkage" evidence=IEA]
[GO:0033014 "tetrapyrrole biosynthetic process" evidence=IEA]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0009570
"chloroplast stroma" evidence=IDA] [GO:0042742 "defense response to
bacterium" evidence=IEP;RCA] [GO:0048046 "apoplast" evidence=IDA]
[GO:0006098 "pentose-phosphate shunt" evidence=RCA] [GO:0006364
"rRNA processing" evidence=RCA] [GO:0006744 "ubiquinone
biosynthetic process" evidence=RCA] [GO:0009073 "aromatic amino
acid family biosynthetic process" evidence=RCA] [GO:0009409
"response to cold" evidence=RCA] [GO:0009697 "salicylic acid
biosynthetic process" evidence=RCA] [GO:0009814 "defense response,
incompatible interaction" evidence=RCA] [GO:0009965 "leaf
morphogenesis" evidence=RCA] [GO:0015995 "chlorophyll biosynthetic
process" evidence=RCA;TAS] [GO:0019288 "isopentenyl diphosphate
biosynthetic process, mevalonate-independent pathway" evidence=RCA]
[GO:0019344 "cysteine biosynthetic process" evidence=RCA]
[GO:0019684 "photosynthesis, light reaction" evidence=RCA]
[GO:0030154 "cell differentiation" evidence=RCA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0004418 "hydroxymethylbilane synthase activity"
evidence=IDA;IMP] [GO:0006779 "porphyrin-containing compound
biosynthetic process" evidence=TAS] InterPro:IPR000860
InterPro:IPR022417 InterPro:IPR022418 InterPro:IPR022419
Pfam:PF01379 Pfam:PF03900 PIRSF:PIRSF001438 PRINTS:PR00151
PROSITE:PS00533 UniPathway:UPA00251 UniPathway:UPA00668
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009570 GO:GO:0048046
GO:GO:0042742 GO:GO:0009941 GO:GO:0006782 GO:GO:0015995
EMBL:AL392174 EMBL:X73839 EMBL:X73535 EMBL:AF419614 EMBL:AY070431
EMBL:AY123037 IPI:IPI00532138 PIR:S50762 RefSeq:NP_196445.1
UniGene:At.48996 UniGene:At.5343 ProteinModelPortal:Q43316
SMR:Q43316 STRING:Q43316 PaxDb:Q43316 PRIDE:Q43316 ProMEX:Q43316
EnsemblPlants:AT5G08280.1 GeneID:830724 KEGG:ath:AT5G08280
TAIR:At5g08280 eggNOG:COG0181 HOGENOM:HOG000228588
InParanoid:Q43316 KO:K01749 OMA:NGSCDTP PhylomeDB:Q43316
ProtClustDB:PLN02691 BioCyc:ARA:AT5G08280-MONOMER
BioCyc:MetaCyc:AT5G08280-MONOMER Genevestigator:Q43316
GermOnline:AT5G08280 GO:GO:0004418 GO:GO:0018160 Gene3D:3.30.160.40
PANTHER:PTHR11557 SUPFAM:SSF54782 TIGRFAMs:TIGR00212 Uniprot:Q43316
Length = 382
Score = 760 (272.6 bits), Expect = 2.1e-75, P = 2.1e-75
Identities = 152/190 (80%), Positives = 164/190 (86%)
Query: 4 HPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVP 63
HPEL ++GAI I IIKTTGDKILSQPLADIGGKGLFTKEIDEALIN IDIAVHSMKDVP
Sbjct: 100 HPELVEDGAIHIEIIKTTGDKILSQPLADIGGKGLFTKEIDEALINGHIDIAVHSMKDVP 159
Query: 64 TYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRRKSQILHRYPSLKVM 123
TYLPEKTILPCNL REDVRDAFI PAGS+VGTASLRRKSQILH+YP+L V
Sbjct: 160 TYLPEKTILPCNLPREDVRDAFICLTAATLAELPAGSVVGTASLRRKSQILHKYPALHVE 219
Query: 124 ENFRGNVQTRLRKLNERVVQATLLALAGLKRLSMTENVTNILSVDDMLPAVAQGAIGIAC 183
ENFRGNVQTRL KL VQATLLALAGLKRLSMTENV +ILS+D+MLPAVAQGAIGIAC
Sbjct: 220 ENFRGNVQTRLSKLQGGKVQATLLALAGLKRLSMTENVASILSLDEMLPAVAQGAIGIAC 279
Query: 184 RSNDEKMVPF 193
R++D+KM +
Sbjct: 280 RTDDDKMATY 289
>TIGR_CMR|SPO_3649 [details] [associations]
symbol:SPO_3649 "porphobilinogen deaminase" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0004418 "hydroxymethylbilane synthase
activity" evidence=ISS] [GO:0006779 "porphyrin-containing compound
biosynthetic process" evidence=ISS] HAMAP:MF_00260
InterPro:IPR000860 InterPro:IPR022417 InterPro:IPR022418
InterPro:IPR022419 Pfam:PF01379 Pfam:PF03900 PIRSF:PIRSF001438
PRINTS:PR00151 PROSITE:PS00533 UniPathway:UPA00251
UniPathway:UPA00668 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0006782 GO:GO:0015995 HOGENOM:HOG000228588 KO:K01749
GO:GO:0004418 GO:GO:0018160 Gene3D:3.30.160.40 PANTHER:PTHR11557
SUPFAM:SSF54782 TIGRFAMs:TIGR00212 OMA:CLAERAF ProtClustDB:PRK00072
RefSeq:YP_168844.1 ProteinModelPortal:Q5LMB4 GeneID:3195060
KEGG:sil:SPO3649 PATRIC:23380781 Uniprot:Q5LMB4
Length = 319
Score = 482 (174.7 bits), Expect = 6.2e-46, P = 6.2e-46
Identities = 103/190 (54%), Positives = 129/190 (67%)
Query: 10 EGAIQIVIIKTTGDKIL----SQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTY 65
E A +IV+I TTGD +PL +IG KGLFTKEI+EA++ IDIAVHS KD+P
Sbjct: 41 EDAFEIVVISTTGDNRAMIEADRPLKEIGNKGLFTKEIEEAMLRGDIDIAVHSTKDMPVE 100
Query: 66 LPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRRKSQILHRYPSLKVMEN 125
P +L L REDVRDAFI P G++VGT+SLRRK+Q+L+R P LKV+E
Sbjct: 101 QPAGLVLDTFLPREDVRDAFISPGHSAIRDLPLGAVVGTSSLRRKAQLLNRRPDLKVVE- 159
Query: 126 FRGNVQTRLRKLNERVVQATLLALAGLKRLSMTENVTNILSVDDMLPAVAQGAIGIACRS 185
FRGNVQTRLRKL+E V + T LA+AG++RL+M E +S DDMLPA+AQGAIGI R
Sbjct: 160 FRGNVQTRLRKLSEGVAECTFLAMAGIRRLNMAEVPATAISPDDMLPAIAQGAIGIERRM 219
Query: 186 NDEKMVPFTT 195
+D + T
Sbjct: 220 DDTRAAEMLT 229
>UNIPROTKB|P06983 [details] [associations]
symbol:hemC species:83333 "Escherichia coli K-12"
[GO:0004418 "hydroxymethylbilane synthase activity"
evidence=IEA;IMP] [GO:0006783 "heme biosynthetic process"
evidence=IMP] [GO:0033014 "tetrapyrrole biosynthetic process"
evidence=IMP] [GO:0018160 "peptidyl-pyrromethane cofactor linkage"
evidence=IEA;IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006782
"protoporphyrinogen IX biosynthetic process" evidence=IEA]
HAMAP:MF_00260 InterPro:IPR000860 InterPro:IPR022417
InterPro:IPR022418 InterPro:IPR022419 Pfam:PF01379 Pfam:PF03900
PIRSF:PIRSF001438 PRINTS:PR00151 PROSITE:PS00533
UniPathway:UPA00251 GO:GO:0005737 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0006783
EMBL:M87049 GO:GO:0006782 EMBL:X66782 eggNOG:COG0181
HOGENOM:HOG000228588 KO:K01749 GO:GO:0004418 GO:GO:0018160
Gene3D:3.30.160.40 PANTHER:PTHR11557 SUPFAM:SSF54782
TIGRFAMs:TIGR00212 OMA:CLAERAF ProtClustDB:PRK00072 EMBL:X04242
EMBL:X12614 PIR:F65184 RefSeq:YP_026260.1 RefSeq:YP_491637.1
PDB:1AH5 PDB:1GTK PDB:1PDA PDB:1YPN PDB:2YPN PDBsum:1AH5
PDBsum:1GTK PDBsum:1PDA PDBsum:1YPN PDBsum:2YPN
ProteinModelPortal:P06983 SMR:P06983 DIP:DIP-9879N IntAct:P06983
MINT:MINT-1302039 PRIDE:P06983 EnsemblBacteria:EBESCT00000000652
EnsemblBacteria:EBESCT00000014936 GeneID:12930663 GeneID:947759
KEGG:ecj:Y75_p3373 KEGG:eco:b3805 PATRIC:32123109 EchoBASE:EB0424
EcoGene:EG10429 BioCyc:EcoCyc:OHMETHYLBILANESYN-MONOMER
BioCyc:ECOL316407:JW5932-MONOMER
BioCyc:MetaCyc:OHMETHYLBILANESYN-MONOMER EvolutionaryTrace:P06983
Genevestigator:P06983 Uniprot:P06983
Length = 313
Score = 417 (151.9 bits), Expect = 4.8e-39, P = 4.8e-39
Identities = 91/189 (48%), Positives = 119/189 (62%)
Query: 1 MALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMK 60
MA HP L +++V + T GD IL PLA +GGKGLF KE++ AL+ ++ DIAVHSMK
Sbjct: 28 MASHPGLV----VELVPMVTRGDVILDTPLAKVGGKGLFVKELEVALLENRADIAVHSMK 83
Query: 61 DVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRRKSQILHRYPSL 120
DVP P+ L +RED RDAF+ PAGSIVGT+SLRR+ Q+ R P L
Sbjct: 84 DVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDALPAGSIVGTSSLRRQCQLAERRPDL 143
Query: 121 KVMENFRGNVQTRLRKLNERVVQATLLALAGLKRLSMTENVTNILSVDDMLPAVAQGAIG 180
++ + RGNV TRL KL+ A +LA+AGLKRL + + L + LPAV QGA+G
Sbjct: 144 -IIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRIRAALPPEISLPAVGQGAVG 202
Query: 181 IACRSNDEK 189
I CR +D +
Sbjct: 203 IECRLDDSR 211
>TIGR_CMR|CHY_1208 [details] [associations]
symbol:CHY_1208 "porphobilinogen deaminase" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0004418
"hydroxymethylbilane synthase activity" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0006779 "porphyrin-containing
compound biosynthetic process" evidence=ISS] HAMAP:MF_00260
InterPro:IPR000860 InterPro:IPR022417 InterPro:IPR022418
InterPro:IPR022419 Pfam:PF01379 Pfam:PF03900 PIRSF:PIRSF001438
PRINTS:PR00151 PROSITE:PS00533 UniPathway:UPA00251 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0006782 eggNOG:COG0181 KO:K01749
GO:GO:0004418 GO:GO:0018160 Gene3D:3.30.160.40 PANTHER:PTHR11557
SUPFAM:SSF54782 TIGRFAMs:TIGR00212 HOGENOM:HOG000228587 OMA:CLAERAF
ProtClustDB:PRK00072 HSSP:P06983 RefSeq:YP_360051.1
ProteinModelPortal:Q3ACT3 STRING:Q3ACT3 GeneID:3727551
KEGG:chy:CHY_1208 PATRIC:21275552
BioCyc:CHYD246194:GJCN-1207-MONOMER Uniprot:Q3ACT3
Length = 311
Score = 390 (142.3 bits), Expect = 3.5e-36, P = 3.5e-36
Identities = 87/185 (47%), Positives = 116/185 (62%)
Query: 3 LHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDV 62
+HPE+ +IV +KT GDKIL LA IG KGLFTKE++ AL+N ID+AVHSMKD+
Sbjct: 29 IHPEIN----FKIVTMKTKGDKILDVALAKIGDKGLFTKELEHALLNKTIDMAVHSMKDL 84
Query: 63 PTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRRKSQILHRYPSLKV 122
PT LPE + +RE D FI P G+ +GT+SLRR +QIL P L+
Sbjct: 85 PTVLPEGLKIGAFCEREYPGDVFISPKGFKFLELPQGARIGTSSLRRIAQILAVRPDLQA 144
Query: 123 MENFRGNVQTRLRKLNERVVQATLLALAGLKRLSMTENVTNILSVDDMLPAVAQGAIGIA 182
+ RGN+ TR RK+ E + +LA AG+KRL + +T +LS D LPAV QG+IG+
Sbjct: 145 IP-LRGNLPTRFRKMEEMDLDGIILAYAGVKRLGYEDKITEMLSFDLCLPAVGQGSIGVE 203
Query: 183 CRSND 187
R++D
Sbjct: 204 IRADD 208
>TIGR_CMR|BA_4696 [details] [associations]
symbol:BA_4696 "porphobilinogen deaminase" species:198094
"Bacillus anthracis str. Ames" [GO:0004418 "hydroxymethylbilane
synthase activity" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0006779 "porphyrin-containing compound
biosynthetic process" evidence=ISS] HAMAP:MF_00260
InterPro:IPR000860 InterPro:IPR022417 InterPro:IPR022418
InterPro:IPR022419 Pfam:PF01379 Pfam:PF03900 PIRSF:PIRSF001438
PRINTS:PR00151 PROSITE:PS00533 UniPathway:UPA00251 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0006782
eggNOG:COG0181 KO:K01749 GO:GO:0004418 GO:GO:0018160
Gene3D:3.30.160.40 PANTHER:PTHR11557 SUPFAM:SSF54782
TIGRFAMs:TIGR00212 RefSeq:NP_846909.1 RefSeq:YP_021344.1
RefSeq:YP_030608.1 ProteinModelPortal:Q81LC7 IntAct:Q81LC7
DNASU:1083703 EnsemblBacteria:EBBACT00000008102
EnsemblBacteria:EBBACT00000015299 EnsemblBacteria:EBBACT00000024052
GeneID:1083703 GeneID:2816117 GeneID:2850412 KEGG:ban:BA_4696
KEGG:bar:GBAA_4696 KEGG:bat:BAS4361 HOGENOM:HOG000228587
OMA:CLAERAF ProtClustDB:PRK00072
BioCyc:BANT260799:GJAJ-4416-MONOMER
BioCyc:BANT261594:GJ7F-4564-MONOMER Uniprot:Q81LC7
Length = 309
Score = 384 (140.2 bits), Expect = 1.5e-35, P = 1.5e-35
Identities = 87/203 (42%), Positives = 118/203 (58%)
Query: 18 IKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQ 77
I T GD IL L+ +GGKGLF KEI+ AL+ +ID+AVHSMKD+P LPE ++ C +
Sbjct: 39 IVTKGDVILDVTLSKVGGKGLFVKEIEHALLTKEIDMAVHSMKDMPAVLPEGLMIGCTPK 98
Query: 78 REDVRDAFIXXXXXXXXXXPAGSIVGTASLRRKSQILHRYPSLKVMENFRGNVQTRLRKL 137
R D RDAFI G+I+GT+SLRR +Q+L P L+V + RGN+ TRLRKL
Sbjct: 99 RVDPRDAFISKSGASYKELAEGAILGTSSLRRSAQLLAARPDLQV-KWIRGNIDTRLRKL 157
Query: 138 NERVVQATLLALAGLKRLSM-TENVTNILSVDDMLPAVAQGAIGIACRSNDEKMVPFTTH 196
E A +LA AGL+R+ E +T L +PAV QGA+ I CR +D+ ++ H
Sbjct: 158 KEEDYDAIILATAGLQRMGWDNEVITEHLDETLCVPAVGQGALAIECREDDKDLLQLLAH 217
Query: 197 SQASILN-TFNCSGKLCYKLHFG 218
++ T +KL G
Sbjct: 218 INDAVTEKTVAAERVFLHKLEGG 240
>TIGR_CMR|CJE_0649 [details] [associations]
symbol:CJE_0649 "porphobilinogen deaminase" species:195099
"Campylobacter jejuni RM1221" [GO:0004418 "hydroxymethylbilane
synthase activity" evidence=ISS] [GO:0006779 "porphyrin-containing
compound biosynthetic process" evidence=ISS] HAMAP:MF_00260
InterPro:IPR000860 InterPro:IPR022417 InterPro:IPR022418
InterPro:IPR022419 Pfam:PF01379 Pfam:PF03900 PIRSF:PIRSF001438
PRINTS:PR00151 PROSITE:PS00533 UniPathway:UPA00251 EMBL:CP000025
GenomeReviews:CP000025_GR GO:GO:0006782 eggNOG:COG0181 KO:K01749
GO:GO:0004418 GO:GO:0018160 Gene3D:3.30.160.40 PANTHER:PTHR11557
SUPFAM:SSF54782 TIGRFAMs:TIGR00212 HOGENOM:HOG000228587 OMA:CLAERAF
ProtClustDB:PRK00072 RefSeq:YP_178664.1 HSSP:P06983
ProteinModelPortal:Q5HVM1 STRING:Q5HVM1 GeneID:3232028
KEGG:cjr:CJE0649 PATRIC:20043018 BioCyc:CJEJ195099:GJC0-664-MONOMER
Uniprot:Q5HVM1
Length = 307
Score = 367 (134.2 bits), Expect = 9.5e-34, P = 9.5e-34
Identities = 76/183 (41%), Positives = 117/183 (63%)
Query: 13 IQIVI--IKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKT 70
I++++ KT GD +L PLA IGGKGLFTKE++E+++ + +AVHS+KDVP++ P+
Sbjct: 30 IEVLLEGFKTKGDVLLDSPLAKIGGKGLFTKELEESMLRKEAHLAVHSLKDVPSFFPQGL 89
Query: 71 ILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRRKSQILHRYPSLKVMENFRGNV 130
+L +RE DA + P G+ +GT SLRRK Q+L P L ++ + RGNV
Sbjct: 90 VLAAVSKREQSNDAMLSQNYKDFLSLPKGAKIGTTSLRRKMQLLLLRPDLDII-SLRGNV 148
Query: 131 QTRLRKLNERVVQATLLALAGLKRLSMTENVTNI--LSVDDMLPAVAQGAIGIACRSNDE 188
+R+ KL A +LA+AG+KRL++ + V + S D+++PA +QGA+GI NDE
Sbjct: 149 NSRIEKLKNNDFDAIILAMAGIKRLNLDKQVNFVYEFSKDELIPAASQGALGIES-INDE 207
Query: 189 KMV 191
K++
Sbjct: 208 KIL 210
>TIGR_CMR|ECH_0701 [details] [associations]
symbol:ECH_0701 "porphobilinogen deaminase" species:205920
"Ehrlichia chaffeensis str. Arkansas" [GO:0004418
"hydroxymethylbilane synthase activity" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0006779 "porphyrin-containing
compound biosynthetic process" evidence=ISS] HAMAP:MF_00260
InterPro:IPR000860 InterPro:IPR022417 InterPro:IPR022418
InterPro:IPR022419 Pfam:PF01379 Pfam:PF03900 PIRSF:PIRSF001438
PRINTS:PR00151 PROSITE:PS00533 UniPathway:UPA00251 EMBL:CP000236
GenomeReviews:CP000236_GR GO:GO:0006782 eggNOG:COG0181 KO:K01749
OMA:NGSCDTP GO:GO:0004418 GO:GO:0018160 Gene3D:3.30.160.40
PANTHER:PTHR11557 SUPFAM:SSF54782 TIGRFAMs:TIGR00212
HOGENOM:HOG000228587 ProtClustDB:PRK00072 RefSeq:YP_507506.1
ProteinModelPortal:Q2GGC7 STRING:Q2GGC7 GeneID:3927748
KEGG:ech:ECH_0701 PATRIC:20576850
BioCyc:ECHA205920:GJNR-703-MONOMER Uniprot:Q2GGC7
Length = 298
Score = 366 (133.9 bits), Expect = 1.2e-33, P = 1.2e-33
Identities = 87/215 (40%), Positives = 121/215 (56%)
Query: 10 EGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEK 69
E ++QIV IKT+GD PL+ IGGK LF KEI+EAL+ ++D+AVHS+KD+P + E
Sbjct: 30 EISVQIVKIKTSGDINNQVPLSAIGGKSLFIKEIEEALLMGKVDLAVHSVKDIPAFYCEG 89
Query: 70 TILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRRKSQILHRYPSLKVMENFRGN 129
I+PC L+R D FI P + +GT+S+RRK Q+ + P L+V+ RGN
Sbjct: 90 LIIPCVLKRNSPYDVFISSKHKDIKSLPLNATIGTSSVRRKVQLNYLRPDLQVVP-VRGN 148
Query: 130 VQTRLRKLNERVVQATLLALAGLKRLSMTENVTNILSVDDMLPAVAQGAIGIACRSNDEK 189
+ TR+ K N +LA AGL R++ + + ILS ML AV QGAIGI CR +D
Sbjct: 149 IDTRILKANVGEFDGIVLAEAGLIRINRCDVIKEILSPKIMLSAVGQGAIGIQCRVDD-- 206
Query: 190 MVPFTTHSQASILNTFNC-SGKLCYKLHFGFLNLV 223
HS + + NC +C FL +
Sbjct: 207 ------HSIINKIKVLNCHQSYVCVMAERSFLKTI 235
>CGD|CAL0000854 [details] [associations]
symbol:HEM3 species:5476 "Candida albicans" [GO:0006783 "heme
biosynthetic process" evidence=ISS;IMP] [GO:0004418
"hydroxymethylbilane synthase activity" evidence=ISS;IMP]
[GO:0009405 "pathogenesis" evidence=IMP] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR000860 InterPro:IPR022417 InterPro:IPR022418
InterPro:IPR022419 Pfam:PF01379 Pfam:PF03900 PIRSF:PIRSF001438
PRINTS:PR00151 PROSITE:PS00533 UniPathway:UPA00251 CGD:CAL0000854
GO:GO:0009405 GO:GO:0006783 GO:GO:0006782 EMBL:AACQ01000104
EMBL:AACQ01000105 eggNOG:COG0181 KO:K01749 GO:GO:0004418
GO:GO:0018160 Gene3D:3.30.160.40 PANTHER:PTHR11557 SUPFAM:SSF54782
TIGRFAMs:TIGR00212 EMBL:AL033502 RefSeq:XP_714346.1
RefSeq:XP_714388.1 ProteinModelPortal:O94048 STRING:O94048
GeneID:3643940 GeneID:3643992 KEGG:cal:CaO19.1742
KEGG:cal:CaO19.9309 Uniprot:O94048
Length = 340
Score = 363 (132.8 bits), Expect = 2.5e-33, P = 2.5e-33
Identities = 83/186 (44%), Positives = 117/186 (62%)
Query: 15 IVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINS-----QIDIAVHSMKDVPTYLPEK 69
I+ + T GDK+ +QPL GGK L+TKE++ L++S ++D+ VHS+KD+PT LPE+
Sbjct: 46 ILALSTLGDKVQTQPLYTFGGKSLWTKELEILLLDSVDEFPKLDLIVHSLKDMPTNLPEE 105
Query: 70 TILPCNLQREDVRDAFIXXXXXXXXXX---PAGSIVGTASLRRKSQILHRYPSLKVMENF 126
L C QRED RDA + PAG+IVGT+S+RR SQ++ YP L+ E+
Sbjct: 106 FELGCIFQREDPRDAIVMKQGSSYKSLKDLPAGAIVGTSSIRRSSQLIKNYPHLR-FESV 164
Query: 127 RGNVQTRLRKLNERVVQ--ATLLALAGLKRLSMTENVTNILSVDDMLPAVAQGAIGIACR 184
RGN+QTRL KL++ + +LA AGL RL + +T+ L DDM AV QGA+GI R
Sbjct: 165 RGNIQTRLNKLDQPNNEYCCLILASAGLIRLGLGHRITSYL--DDMYYAVGQGALGIEIR 222
Query: 185 SNDEKM 190
D+ +
Sbjct: 223 KGDDNI 228
>UNIPROTKB|O94048 [details] [associations]
symbol:HEM3 "Porphobilinogen deaminase" species:237561
"Candida albicans SC5314" [GO:0004418 "hydroxymethylbilane synthase
activity" evidence=ISS;IMP] [GO:0006783 "heme biosynthetic process"
evidence=ISS;IMP] [GO:0009405 "pathogenesis" evidence=IMP]
InterPro:IPR000860 InterPro:IPR022417 InterPro:IPR022418
InterPro:IPR022419 Pfam:PF01379 Pfam:PF03900 PIRSF:PIRSF001438
PRINTS:PR00151 PROSITE:PS00533 UniPathway:UPA00251 CGD:CAL0000854
GO:GO:0009405 GO:GO:0006783 GO:GO:0006782 EMBL:AACQ01000104
EMBL:AACQ01000105 eggNOG:COG0181 KO:K01749 GO:GO:0004418
GO:GO:0018160 Gene3D:3.30.160.40 PANTHER:PTHR11557 SUPFAM:SSF54782
TIGRFAMs:TIGR00212 EMBL:AL033502 RefSeq:XP_714346.1
RefSeq:XP_714388.1 ProteinModelPortal:O94048 STRING:O94048
GeneID:3643940 GeneID:3643992 KEGG:cal:CaO19.1742
KEGG:cal:CaO19.9309 Uniprot:O94048
Length = 340
Score = 363 (132.8 bits), Expect = 2.5e-33, P = 2.5e-33
Identities = 83/186 (44%), Positives = 117/186 (62%)
Query: 15 IVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINS-----QIDIAVHSMKDVPTYLPEK 69
I+ + T GDK+ +QPL GGK L+TKE++ L++S ++D+ VHS+KD+PT LPE+
Sbjct: 46 ILALSTLGDKVQTQPLYTFGGKSLWTKELEILLLDSVDEFPKLDLIVHSLKDMPTNLPEE 105
Query: 70 TILPCNLQREDVRDAFIXXXXXXXXXX---PAGSIVGTASLRRKSQILHRYPSLKVMENF 126
L C QRED RDA + PAG+IVGT+S+RR SQ++ YP L+ E+
Sbjct: 106 FELGCIFQREDPRDAIVMKQGSSYKSLKDLPAGAIVGTSSIRRSSQLIKNYPHLR-FESV 164
Query: 127 RGNVQTRLRKLNERVVQ--ATLLALAGLKRLSMTENVTNILSVDDMLPAVAQGAIGIACR 184
RGN+QTRL KL++ + +LA AGL RL + +T+ L DDM AV QGA+GI R
Sbjct: 165 RGNIQTRLNKLDQPNNEYCCLILASAGLIRLGLGHRITSYL--DDMYYAVGQGALGIEIR 222
Query: 185 SNDEKM 190
D+ +
Sbjct: 223 KGDDNI 228
>TIGR_CMR|APH_0746 [details] [associations]
symbol:APH_0746 "porphobilinogen deaminase" species:212042
"Anaplasma phagocytophilum HZ" [GO:0004418 "hydroxymethylbilane
synthase activity" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0006779 "porphyrin-containing compound
biosynthetic process" evidence=ISS] HAMAP:MF_00260
InterPro:IPR000860 InterPro:IPR022417 InterPro:IPR022418
InterPro:IPR022419 Pfam:PF01379 Pfam:PF03900 PIRSF:PIRSF001438
PRINTS:PR00151 PROSITE:PS00533 UniPathway:UPA00251
UniPathway:UPA00668 EMBL:CP000235 GenomeReviews:CP000235_GR
GO:GO:0006782 GO:GO:0015995 eggNOG:COG0181 KO:K01749 GO:GO:0004418
GO:GO:0018160 Gene3D:3.30.160.40 PANTHER:PTHR11557 SUPFAM:SSF54782
TIGRFAMs:TIGR00212 HOGENOM:HOG000228587 ProtClustDB:PRK00072
RefSeq:YP_505325.1 ProteinModelPortal:Q2GJX6 STRING:Q2GJX6
GeneID:3930703 KEGG:aph:APH_0746 PATRIC:20950180 OMA:LEREDPH
BioCyc:APHA212042:GHPM-762-MONOMER Uniprot:Q2GJX6
Length = 304
Score = 357 (130.7 bits), Expect = 1.1e-32, P = 1.1e-32
Identities = 78/182 (42%), Positives = 110/182 (60%)
Query: 10 EGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEK 69
E + +I+ IKT+GD PL DIGGKGLF KEI+EAL+++ ID+AVHS KDVP E
Sbjct: 34 ELSTRIITIKTSGDMNTHVPLYDIGGKGLFIKEIEEALLDNIIDVAVHSAKDVPGIYSED 93
Query: 70 TILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRRKSQILHRYPSLKVMENFRGN 129
+PC L R DAF+ P + +GT+S+RRK Q+L P L+++ RGN
Sbjct: 94 LDIPCILPRASALDAFLSSKYDSIASLPLNAKIGTSSVRRKVQLLTMRPDLEIIP-MRGN 152
Query: 130 VQTRLRKLNERVVQATLLALAGLKRLSMTENVTNILSVDDMLPAVAQGAIGIACRSNDEK 189
V+TR+ K+ +LA AGL R+S ++ +L + ML AV QGAI + CR D +
Sbjct: 153 VETRISKMQMGECDGIVLAEAGLYRVSKDNLISEVLQPEVMLGAVGQGAICVQCRRYDRR 212
Query: 190 MV 191
++
Sbjct: 213 IL 214
>ZFIN|ZDB-GENE-040426-1375 [details] [associations]
symbol:hmbsa "hydroxymethylbilane synthase a"
species:7955 "Danio rerio" [GO:0018160 "peptidyl-pyrromethane
cofactor linkage" evidence=IEA] [GO:0033014 "tetrapyrrole
biosynthetic process" evidence=IEA] [GO:0004418
"hydroxymethylbilane synthase activity" evidence=IEA]
HAMAP:MF_00260 InterPro:IPR000860 InterPro:IPR022417
InterPro:IPR022418 InterPro:IPR022419 Pfam:PF01379 Pfam:PF03900
PIRSF:PIRSF001438 PRINTS:PR00151 PROSITE:PS00533
ZFIN:ZDB-GENE-040426-1375 KO:K01749 GO:GO:0004418 GO:GO:0018160
Gene3D:3.30.160.40 PANTHER:PTHR11557 SUPFAM:SSF54782
TIGRFAMs:TIGR00212 HOVERGEN:HBG000967 HSSP:P06983 GO:GO:0033014
EMBL:BC053268 IPI:IPI00487717 RefSeq:NP_957448.1 UniGene:Dr.79518
ProteinModelPortal:Q7T336 STRING:Q7T336 PRIDE:Q7T336 GeneID:394129
KEGG:dre:394129 CTD:394129 InParanoid:Q7T336 NextBio:20815080
ArrayExpress:Q7T336 Bgee:Q7T336 Uniprot:Q7T336
Length = 358
Score = 355 (130.0 bits), Expect = 1.8e-32, P = 1.8e-32
Identities = 78/203 (38%), Positives = 122/203 (60%)
Query: 6 ELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTY 65
+L + ++IV + T GDKIL L+ IG K LFTKE++ AL +++DI VHS+KD+PT
Sbjct: 42 QLYPDVRLEIVAMSTIGDKILDTALSKIGEKSLFTKELENALERNEVDIVVHSLKDLPTS 101
Query: 66 LPEKTILPCNLQREDVRDAFIXX---XXXXXXXXPAGSIVGTASLRRKSQILHRYPSLKV 122
LP + L+RE+ DA + P S++GT+SLRR +Q+ R+P L+
Sbjct: 102 LPPGFTIGAILERENPHDAVVLHPKNAGLTLDSLPEKSVIGTSSLRRAAQLKKRFPQLE- 160
Query: 123 MENFRGNVQTRLRKLNERV-VQATLLALAGLKRLSMTENVTNILSVDDMLPAVAQGAIGI 181
EN RGN+ TRL+KL+E+ A +LA AGLKR+ ++ +L +D + AV QGA+ +
Sbjct: 161 FENIRGNLNTRLKKLDEKDDYAAIILAAAGLKRMGWESRISQVLGPEDCMYAVGQGALAV 220
Query: 182 ACRSNDEKMVPFTT--HSQASIL 202
R+ D+ ++ + H ++L
Sbjct: 221 EVRAQDKDILEMVSVLHHPDTVL 243
>DICTYBASE|DDB_G0284697 [details] [associations]
symbol:hemC "porphobilinogen deaminase" species:44689
"Dictyostelium discoideum" [GO:0033014 "tetrapyrrole biosynthetic
process" evidence=IEA] [GO:0018160 "peptidyl-pyrromethane cofactor
linkage" evidence=IEA] [GO:0004418 "hydroxymethylbilane synthase
activity" evidence=IEA;ISS] [GO:0005575 "cellular_component"
evidence=ND] [GO:0006783 "heme biosynthetic process"
evidence=IEA;ISS] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0006779 "porphyrin-containing compound biosynthetic process"
evidence=IEA] [GO:0006782 "protoporphyrinogen IX biosynthetic
process" evidence=IEA] InterPro:IPR000860 InterPro:IPR022417
InterPro:IPR022418 InterPro:IPR022419 Pfam:PF01379 Pfam:PF03900
PIRSF:PIRSF001438 PRINTS:PR00151 PROSITE:PS00533
UniPathway:UPA00251 dictyBase:DDB_G0284697
GenomeReviews:CM000153_GR GO:GO:0006783 GO:GO:0006782
EMBL:AAFI02000070 eggNOG:COG0181 KO:K01749 GO:GO:0004418
GO:GO:0018160 Gene3D:3.30.160.40 PANTHER:PTHR11557 SUPFAM:SSF54782
TIGRFAMs:TIGR00212 HSSP:P06983 RefSeq:XP_638482.1
ProteinModelPortal:Q54P93 STRING:Q54P93 EnsemblProtists:DDB0231417
GeneID:8624733 KEGG:ddi:DDB_G0284697 OMA:QPLRGNV
ProtClustDB:CLSZ2430242 Uniprot:Q54P93
Length = 325
Score = 340 (124.7 bits), Expect = 6.9e-31, P = 6.9e-31
Identities = 71/183 (38%), Positives = 114/183 (62%)
Query: 13 IQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTIL 72
++I + TTGDK+L L+ IG KGLFTKE+++ ++N ID+AVHS+KD+PT LP+ L
Sbjct: 40 VEIKTMDTTGDKVLDVSLSKIGDKGLFTKELEDMMLNGTIDLAVHSLKDIPTKLPDGLKL 99
Query: 73 PCNLQREDVRDAFIXXXXXXX-----XXXPAGSIVGTASLRRKSQILHRYPSLKVMENFR 127
+R + DAFI P G+++G++SLRR +Q+ YP L+ ++ R
Sbjct: 100 GAITKRYNTSDAFIANAKKHGKNCKLSELPQGAMIGSSSLRRVAQLKKAYPHLQ-FKDIR 158
Query: 128 GNVQTRLRKLNE--RVVQATLLALAGLKRLSMTENVTNILSVDDMLPAVAQGAIGIACRS 185
GN+ TR +KL + +LA+AGL+R+ +T++++ I+ L AV QG++GI C+
Sbjct: 159 GNLNTRFKKLEDDSNGYDGMILAVAGLERMELTDHISEIIPDSISLYAVGQGSLGIECKD 218
Query: 186 NDE 188
D+
Sbjct: 219 GDD 221
>UNIPROTKB|Q2KIN5 [details] [associations]
symbol:HMBS "Porphobilinogen deaminase" species:9913 "Bos
taurus" [GO:0006782 "protoporphyrinogen IX biosynthetic process"
evidence=IEA] [GO:0004418 "hydroxymethylbilane synthase activity"
evidence=IEA] [GO:0018160 "peptidyl-pyrromethane cofactor linkage"
evidence=IEA] InterPro:IPR000860 InterPro:IPR022417
InterPro:IPR022418 InterPro:IPR022419 Pfam:PF01379 Pfam:PF03900
PIRSF:PIRSF001438 PRINTS:PR00151 PROSITE:PS00533
UniPathway:UPA00251 GO:GO:0006782 eggNOG:COG0181 KO:K01749
GO:GO:0004418 GO:GO:0018160 Gene3D:3.30.160.40 PANTHER:PTHR11557
SUPFAM:SSF54782 TIGRFAMs:TIGR00212 HOGENOM:HOG000228587 OMA:CLAERAF
EMBL:BC112573 IPI:IPI00690248 RefSeq:NP_001039672.1
UniGene:Bt.21218 ProteinModelPortal:Q2KIN5 STRING:Q2KIN5
Ensembl:ENSBTAT00000007052 GeneID:515614 KEGG:bta:515614 CTD:3145
GeneTree:ENSGT00390000009083 HOVERGEN:HBG000967 InParanoid:Q2KIN5
OrthoDB:EOG4QJRNF NextBio:20871921 Uniprot:Q2KIN5
Length = 361
Score = 338 (124.0 bits), Expect = 1.1e-30, P = 1.1e-30
Identities = 78/194 (40%), Positives = 117/194 (60%)
Query: 2 ALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKD 61
AL+P L E I+ + TTGDKIL L+ IG K LFTKE++ AL +++D+ VHS+KD
Sbjct: 44 ALYPGLQFE----IIAMSTTGDKILDTALSKIGEKSLFTKELEHALERNEVDLVVHSLKD 99
Query: 62 VPTYLPEKTILPCNLQREDVRDAFIXX---XXXXXXXXPAGSIVGTASLRRKSQILHRYP 118
+PT LP + +RE DA + P S+VGT+SLRR +Q+ ++P
Sbjct: 100 LPTVLPPGFTIGAVCKRESPYDAVVFHPKFVGKTLETLPEKSVVGTSSLRRAAQLQRKFP 159
Query: 119 SLKVMENFRGNVQTRLRKLNE-RVVQATLLALAGLKRLSMTENVTNILSVDDMLPAVAQG 177
L+ ++ RGN+ TRLRKL+E + A +LA AGL+R+ V IL ++ + AV QG
Sbjct: 160 HLE-FKSIRGNLNTRLRKLDELQEFSAIILATAGLQRMGWQNRVGQILHPEECMYAVGQG 218
Query: 178 AIGIACRSNDEKMV 191
A+G+ R+ D+ ++
Sbjct: 219 ALGVEVRAKDQDIL 232
>UNIPROTKB|F1NKN8 [details] [associations]
symbol:HMBS "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004418 "hydroxymethylbilane synthase activity"
evidence=IEA] [GO:0018160 "peptidyl-pyrromethane cofactor linkage"
evidence=IEA] [GO:0033014 "tetrapyrrole biosynthetic process"
evidence=IEA] HAMAP:MF_00260 InterPro:IPR000860 InterPro:IPR022417
InterPro:IPR022418 InterPro:IPR022419 Pfam:PF01379 Pfam:PF03900
PIRSF:PIRSF001438 PRINTS:PR00151 PROSITE:PS00533 GO:GO:0004418
GO:GO:0018160 Gene3D:3.30.160.40 PANTHER:PTHR11557 SUPFAM:SSF54782
TIGRFAMs:TIGR00212 OMA:CLAERAF GeneTree:ENSGT00390000009083
GO:GO:0033014 EMBL:AADN02042074 IPI:IPI00592719
Ensembl:ENSGALT00000000380 Uniprot:F1NKN8
Length = 349
Score = 337 (123.7 bits), Expect = 1.4e-30, P = 1.4e-30
Identities = 73/180 (40%), Positives = 111/180 (61%)
Query: 14 QIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILP 73
+IV + TTGDKIL L+ IG K LFTKE++ AL +++D+ VHS+KD+PT LP +
Sbjct: 40 EIVAMSTTGDKILDTALSKIGEKSLFTKELENALERNEVDLVVHSLKDLPTSLPPGFTIG 99
Query: 74 CNLQREDVRDAFIXXXXX---XXXXXPAGSIVGTASLRRKSQILHRYPSLKVMENFRGNV 130
+RE+ DA + P S++GT+SLRR +Q+ ++P L+ + RGN+
Sbjct: 100 AICKRENPLDAVVFHPKNCGKTLSVLPEKSVIGTSSLRRAAQLKKKFPQLE-FRDIRGNL 158
Query: 131 QTRLRKLNERV-VQATLLALAGLKRLSMTENVTNILSVDDMLPAVAQGAIGIACRSNDEK 189
TRL+KL+E+ A +LA AGLKR+ + +LS +D L AV QGA+ + R+ D++
Sbjct: 159 NTRLKKLDEKEDFSAIILAAAGLKRMGWENRIGQLLSPEDCLYAVGQGALAVEVRAKDQE 218
>ZFIN|ZDB-GENE-050522-491 [details] [associations]
symbol:hmbsb "hydroxymethylbilane synthase, b"
species:7955 "Danio rerio" [GO:0033014 "tetrapyrrole biosynthetic
process" evidence=IEA] [GO:0004418 "hydroxymethylbilane synthase
activity" evidence=IEA] [GO:0018160 "peptidyl-pyrromethane cofactor
linkage" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] HAMAP:MF_00260 InterPro:IPR000860 InterPro:IPR022417
InterPro:IPR022418 InterPro:IPR022419 Pfam:PF01379 Pfam:PF03900
PIRSF:PIRSF001438 PRINTS:PR00151 PROSITE:PS00533 InterPro:IPR009081
ZFIN:ZDB-GENE-050522-491 PROSITE:PS50075 KO:K01749 GO:GO:0004418
GO:GO:0018160 Gene3D:3.30.160.40 PANTHER:PTHR11557 SUPFAM:SSF54782
TIGRFAMs:TIGR00212 HOGENOM:HOG000228587 HOVERGEN:HBG000967
OrthoDB:EOG4QJRNF GO:GO:0033014 EMBL:BC095373 IPI:IPI00833720
RefSeq:NP_001019559.1 UniGene:Dr.78873 ProteinModelPortal:Q503D2
STRING:Q503D2 GeneID:338290 KEGG:dre:338290 CTD:338290
NextBio:20812617 Uniprot:Q503D2
Length = 360
Score = 337 (123.7 bits), Expect = 1.4e-30, P = 1.4e-30
Identities = 75/186 (40%), Positives = 113/186 (60%)
Query: 6 ELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTY 65
EL + +IV + TTGDKIL L+ IG K LFTKE++ AL +++D+ VHS+KD+PT
Sbjct: 41 ELYPDVLFEIVAMSTTGDKILDTALSKIGEKSLFTKELENALEKNEVDLVVHSLKDLPTV 100
Query: 66 LPEKTILPCNLQREDVRDAFIXXXXXXXXXXPA---GSIVGTASLRRKSQILHRYPSLKV 122
LP + L+RE+ DA + + S++GT+SLRR +Q+ R+P L+
Sbjct: 101 LPAGFTIGAVLKRENPHDAVVLHPKNKGKRLDSLSNKSVIGTSSLRRAAQLKKRFPHLE- 159
Query: 123 MENFRGNVQTRLRKLNERV-VQATLLALAGLKRLSMTENVTNILSVDDMLPAVAQGAIGI 181
++ RGN+ TRL+KL+E A +LA AGLKR+ ++ IL +D + AV QGA+ +
Sbjct: 160 FKDIRGNLNTRLKKLDENNDFSAIILAAAGLKRMGWENRISQILGPEDCMYAVGQGALAV 219
Query: 182 ACRSND 187
R+ D
Sbjct: 220 EVRARD 225
>FB|FBgn0010786 [details] [associations]
symbol:l(3)02640 "lethal (3) 02640" species:7227 "Drosophila
melanogaster" [GO:0004418 "hydroxymethylbilane synthase activity"
evidence=ISS] [GO:0018160 "peptidyl-pyrromethane cofactor linkage"
evidence=IEA] [GO:0033014 "tetrapyrrole biosynthetic process"
evidence=IEA] HAMAP:MF_00260 InterPro:IPR000860 InterPro:IPR022417
InterPro:IPR022418 InterPro:IPR022419 Pfam:PF01379 Pfam:PF03900
PRINTS:PR00151 PROSITE:PS00533 EMBL:AE014296 KO:K01749
GO:GO:0004418 GO:GO:0018160 Gene3D:3.30.160.40 PANTHER:PTHR11557
SUPFAM:SSF54782 TIGRFAMs:TIGR00212 GeneTree:ENSGT00390000009083
HSSP:P06983 GO:GO:0033014 FlyBase:FBgn0010786 ChiTaRS:l(3)02640
EMBL:BT023907 EMBL:BT050461 RefSeq:NP_612103.1 UniGene:Dm.2323
SMR:Q9W0G4 STRING:Q9W0G4 EnsemblMetazoa:FBtr0072679 GeneID:46140
KEGG:dme:Dmel_CG9165 UCSC:CG9165-RA InParanoid:Q9W0G4 OMA:PPVICED
GenomeRNAi:46140 NextBio:838752 Uniprot:Q9W0G4
Length = 652
Score = 344 (126.2 bits), Expect = 1.4e-30, P = 1.4e-30
Identities = 73/183 (39%), Positives = 110/183 (60%)
Query: 14 QIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILP 73
+I + T GD++L+ L IG K LFT+++++AL N +D VHS+KD+PT LP +
Sbjct: 39 EIHTMSTFGDRVLNVSLPKIGEKSLFTRDLEDALRNGGVDFVVHSLKDLPTALPTGMAIG 98
Query: 74 CNLQREDVRDAFIXXXXX---XXXXXPAGSIVGTASLRRKSQILHRYPSLKVMENFRGNV 130
L+RED RDA + P GS++GT+SLRR +QI YP L V + RGN+
Sbjct: 99 AVLEREDARDALVLRENFKGHTIASLPKGSVIGTSSLRRTAQIRRMYPHLTVCD-IRGNL 157
Query: 131 QTRLRKLN--ERVVQATLLALAGLKRLSMTENVTNILSVDDMLPAVAQGAIGIACRSNDE 188
TRL KL+ + +LA AGL R+ ++ +L D+L AV QGA+ + CR+ND+
Sbjct: 158 NTRLAKLDAADSKFSGIILAQAGLVRMGWMSRISQVLEPTDLLYAVGQGALAVECRANDD 217
Query: 189 KMV 191
+++
Sbjct: 218 QVL 220
>UNIPROTKB|E2RTD6 [details] [associations]
symbol:HMBS "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0033014 "tetrapyrrole biosynthetic process"
evidence=IEA] [GO:0018160 "peptidyl-pyrromethane cofactor linkage"
evidence=IEA] [GO:0004418 "hydroxymethylbilane synthase activity"
evidence=IEA] HAMAP:MF_00260 InterPro:IPR000860 InterPro:IPR022417
InterPro:IPR022418 InterPro:IPR022419 Pfam:PF01379 Pfam:PF03900
PIRSF:PIRSF001438 PRINTS:PR00151 PROSITE:PS00533 GO:GO:0004418
GO:GO:0018160 Gene3D:3.30.160.40 PANTHER:PTHR11557 SUPFAM:SSF54782
TIGRFAMs:TIGR00212 OMA:CLAERAF GeneTree:ENSGT00390000009083
GO:GO:0033014 EMBL:AAEX03003441 Ensembl:ENSCAFT00000019616
Uniprot:E2RTD6
Length = 362
Score = 336 (123.3 bits), Expect = 1.8e-30, P = 1.8e-30
Identities = 80/195 (41%), Positives = 117/195 (60%)
Query: 2 ALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKD 61
AL+P L E IV + TTGDKIL L+ IG K LFTKE++ AL +++D+ VHS+KD
Sbjct: 44 ALYPGLQFE----IVAMSTTGDKILDTALSKIGEKSLFTKELEHALEKNEVDLVVHSLKD 99
Query: 62 VPTYLPEKTILPCNLQREDVRDAFIXX---XXXXXXXXPA-GSIVGTASLRRKSQILHRY 117
+PT LP + +RE+ DA + P S+VGT+SLRR +Q+ ++
Sbjct: 100 LPTVLPPGFTIGAICKRENPYDAVVFHPKFVGKTLETLPEKSSVVGTSSLRRAAQLQRKF 159
Query: 118 PSLKVMENFRGNVQTRLRKLNE-RVVQATLLALAGLKRLSMTENVTNILSVDDMLPAVAQ 176
P L+ + RGN+ TRLRKL+E + A +LA AGL+R+ V IL ++ + AV Q
Sbjct: 160 PHLE-FRSIRGNLNTRLRKLDELQEFSAIILAAAGLQRMGWQHRVGQILHPEECMYAVGQ 218
Query: 177 GAIGIACRSNDEKMV 191
GA+G+ R+ D+ M+
Sbjct: 219 GALGVEVRAKDQDML 233
>UNIPROTKB|P08397 [details] [associations]
symbol:HMBS "Porphobilinogen deaminase" species:9606 "Homo
sapiens" [GO:0018160 "peptidyl-pyrromethane cofactor linkage"
evidence=IEA] [GO:0006782 "protoporphyrinogen IX biosynthetic
process" evidence=IEA] [GO:0004418 "hydroxymethylbilane synthase
activity" evidence=IDA] [GO:0006783 "heme biosynthetic process"
evidence=IC;TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006778
"porphyrin-containing compound metabolic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
Reactome:REACT_111217 InterPro:IPR000860 InterPro:IPR022417
InterPro:IPR022418 InterPro:IPR022419 Pfam:PF01379 Pfam:PF03900
PIRSF:PIRSF001438 PRINTS:PR00151 PROSITE:PS00533
UniPathway:UPA00251 GO:GO:0005829 GO:GO:0005634 EMBL:CH471065
GO:GO:0044281 GO:GO:0071236 GO:GO:0071549 GO:GO:0042493
GO:GO:0032355 GO:GO:0010043 GO:GO:0050662 GO:GO:0031100
GO:GO:0030424 GO:GO:0031406 GO:GO:0001666 GO:GO:0009743
GO:GO:0006783 GO:GO:0000793 GO:GO:0043176 GO:GO:0043200
GO:GO:0071243 GO:GO:0051597 GO:GO:0071418 GO:GO:0032025
GO:GO:0006782 GO:GO:0071345 GO:GO:0071284 eggNOG:COG0181 KO:K01749
GO:GO:0004418 GO:GO:0018160 Gene3D:3.30.160.40 PANTHER:PTHR11557
SUPFAM:SSF54782 TIGRFAMs:TIGR00212 HOGENOM:HOG000228587 OMA:CLAERAF
CTD:3145 HOVERGEN:HBG000967 OrthoDB:EOG4QJRNF EMBL:X04217
EMBL:X04808 EMBL:M95623 EMBL:AK290275 EMBL:BC000520 EMBL:BC008149
EMBL:BC019323 EMBL:X68018 EMBL:S60381 IPI:IPI00028160
IPI:IPI00219877 PIR:A45012 RefSeq:NP_000181.2 RefSeq:NP_001019553.1
UniGene:Hs.82609 PDB:3ECR PDB:3EQ1 PDBsum:3ECR PDBsum:3EQ1
ProteinModelPortal:P08397 SMR:P08397 STRING:P08397
PhosphoSite:P08397 DMDM:1170217 PaxDb:P08397 PRIDE:P08397
DNASU:3145 Ensembl:ENST00000278715 Ensembl:ENST00000392841
Ensembl:ENST00000442944 Ensembl:ENST00000537841
Ensembl:ENST00000570821 Ensembl:ENST00000571563
Ensembl:ENST00000574152 Ensembl:ENST00000575587 GeneID:3145
KEGG:hsa:3145 UCSC:uc001puz.1 GeneCards:GC11P118955 HGNC:HGNC:4982
HPA:HPA006114 MIM:176000 MIM:609806 neXtProt:NX_P08397
Orphanet:79276 PharmGKB:PA29317 InParanoid:P08397 PhylomeDB:P08397
BRENDA:2.5.1.61 EvolutionaryTrace:P08397 GenomeRNAi:3145
NextBio:12464 ArrayExpress:P08397 Bgee:P08397 CleanEx:HS_HMBS
Genevestigator:P08397 GermOnline:ENSG00000149397 GO:GO:0004852
GO:GO:0048708 GO:GO:0033273 Uniprot:P08397
Length = 361
Score = 336 (123.3 bits), Expect = 1.8e-30, P = 1.8e-30
Identities = 73/182 (40%), Positives = 112/182 (61%)
Query: 14 QIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILP 73
+I+ + TTGDKIL L+ IG K LFTKE++ AL +++D+ VHS+KD+PT LP +
Sbjct: 52 EIIAMSTTGDKILDTALSKIGEKSLFTKELEHALEKNEVDLVVHSLKDLPTVLPPGFTIG 111
Query: 74 CNLQREDVRDAFIXX---XXXXXXXXPAGSIVGTASLRRKSQILHRYPSLKVMENFRGNV 130
+RE+ DA + P S+VGT+SLRR +Q+ ++P L+ + RGN+
Sbjct: 112 AICKRENPHDAVVFHPKFVGKTLETLPEKSVVGTSSLRRAAQLQRKFPHLE-FRSIRGNL 170
Query: 131 QTRLRKLNERV-VQATLLALAGLKRLSMTENVTNILSVDDMLPAVAQGAIGIACRSNDEK 189
TRLRKL+E+ A +LA AGL+R+ V IL ++ + AV QGA+G+ R+ D+
Sbjct: 171 NTRLRKLDEQQEFSAIILATAGLQRMGWHNRVGQILHPEECMYAVGQGALGVEVRAKDQD 230
Query: 190 MV 191
++
Sbjct: 231 IL 232
>UNIPROTKB|F6Q2D2 [details] [associations]
symbol:HMBS "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0033014 "tetrapyrrole biosynthetic process"
evidence=IEA] [GO:0004418 "hydroxymethylbilane synthase activity"
evidence=IEA] InterPro:IPR000860 InterPro:IPR022417
InterPro:IPR022418 Pfam:PF01379 Pfam:PF03900 PIRSF:PIRSF001438
PRINTS:PR00151 eggNOG:COG0181 GO:GO:0004418 Gene3D:3.30.160.40
PANTHER:PTHR11557 SUPFAM:SSF54782 TIGRFAMs:TIGR00212
HOGENOM:HOG000228587 GeneTree:ENSGT00390000009083
HOVERGEN:HBG000967 OrthoDB:EOG4QJRNF GO:GO:0033014 EMBL:CU639481
Ensembl:ENSSSCT00000016474 OMA:GKGAFTK Uniprot:F6Q2D2
Length = 358
Score = 332 (121.9 bits), Expect = 4.9e-30, P = 4.9e-30
Identities = 79/205 (38%), Positives = 120/205 (58%)
Query: 2 ALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKD 61
AL+P L E I+ + TTGDKIL L+ IG K LFTKE++ AL +++D+ VHS+KD
Sbjct: 44 ALYPGLQFE----IIAMSTTGDKILDTALSKIGEKSLFTKELEHALERNEVDLVVHSLKD 99
Query: 62 VPTYLPEKTILPCNLQREDVRDAFIXX---XXXXXXXXPAGSIVGTASLRRKSQILHRYP 118
+PT LP + +RE DA + P S+VGT+SLRR +Q+ ++P
Sbjct: 100 LPTVLPPGFTIGAVCKRECPYDAVVFHPKFVGKTLETLPEKSVVGTSSLRRAAQLQRKFP 159
Query: 119 SLKVMENFRGNVQTRLRKLNE-RVVQATLLALAGLKRLSMTENVTNILSVDDMLPAVAQG 177
L+ ++ RGN+ TRLRKL+E + A +LA AGL+R+ V IL ++ + AV QG
Sbjct: 160 HLE-FKSIRGNLNTRLRKLDELQEFSAIILAAAGLQRMGWQNRVGQILHPEECMYAVGQG 218
Query: 178 AIGIACRSNDEKMVPFTTHSQASIL 202
A+G+ R++ + + H ++L
Sbjct: 219 ALGVEVRADQDILDLVGVHDPETLL 243
>RGD|2801 [details] [associations]
symbol:Hmbs "hydroxymethylbilane synthase" species:10116 "Rattus
norvegicus" [GO:0001666 "response to hypoxia" evidence=IEP]
[GO:0004418 "hydroxymethylbilane synthase activity"
evidence=ISO;IMP;IDA] [GO:0004852 "uroporphyrinogen-III synthase
activity" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0006782 "protoporphyrinogen IX biosynthetic
process" evidence=IEA] [GO:0009725 "response to hormone stimulus"
evidence=IEP] [GO:0009743 "response to carbohydrate stimulus"
evidence=IEP] [GO:0010038 "response to metal ion" evidence=IEP]
[GO:0010043 "response to zinc ion" evidence=IEP] [GO:0010288
"response to lead ion" evidence=IEP] [GO:0014070 "response to organic
cyclic compound" evidence=IEP] [GO:0018160 "peptidyl-pyrromethane
cofactor linkage" evidence=IEA] [GO:0030424 "axon" evidence=IDA]
[GO:0031100 "organ regeneration" evidence=IEP] [GO:0031406
"carboxylic acid binding" evidence=IPI] [GO:0031667 "response to
nutrient levels" evidence=IEP] [GO:0032025 "response to cobalt ion"
evidence=IEP] [GO:0032355 "response to estradiol stimulus"
evidence=IEP] [GO:0033014 "tetrapyrrole biosynthetic process"
evidence=IMP;IDA] [GO:0033273 "response to vitamin" evidence=IEP]
[GO:0042493 "response to drug" evidence=IEP] [GO:0043176 "amine
binding" evidence=IPI] [GO:0043200 "response to amino acid stimulus"
evidence=IEP] [GO:0048708 "astrocyte differentiation" evidence=IEP]
[GO:0050662 "coenzyme binding" evidence=IPI] [GO:0051597 "response to
methylmercury" evidence=IEP] [GO:0071236 "cellular response to
antibiotic" evidence=IEP] [GO:0071243 "cellular response to
arsenic-containing substance" evidence=IEP] [GO:0071284 "cellular
response to lead ion" evidence=IEP] [GO:0071345 "cellular response to
cytokine stimulus" evidence=IEP] [GO:0071418 "cellular response to
amine stimulus" evidence=IEP] [GO:0071549 "cellular response to
dexamethasone stimulus" evidence=IEP] [GO:0000793 "condensed
chromosome" evidence=IDA] InterPro:IPR000860 InterPro:IPR022417
InterPro:IPR022418 InterPro:IPR022419 Pfam:PF01379 Pfam:PF03900
PIRSF:PIRSF001438 PRINTS:PR00151 PROSITE:PS00533 UniPathway:UPA00251
RGD:2801 GO:GO:0005634 GO:GO:0005737 GO:GO:0071236 GO:GO:0071549
GO:GO:0042493 GO:GO:0032355 GO:GO:0010043 GO:GO:0050662 GO:GO:0031100
GO:GO:0030424 GO:GO:0031406 GO:GO:0001666 GO:GO:0009743 GO:GO:0043176
GO:GO:0043200 GO:GO:0071243 GO:GO:0051597 GO:GO:0071418 GO:GO:0032025
GO:GO:0006782 GO:GO:0071345 GO:GO:0071284 eggNOG:COG0181
GO:GO:0004418 GO:GO:0018160 Gene3D:3.30.160.40 PANTHER:PTHR11557
SUPFAM:SSF54782 TIGRFAMs:TIGR00212 HOGENOM:HOG000228587
HOVERGEN:HBG000967 OrthoDB:EOG4QJRNF GO:GO:0004852 GO:GO:0048708
GO:GO:0033273 EMBL:X06827 EMBL:Y12006 IPI:IPI00194345 IPI:IPI00551682
PIR:JE0285 UniGene:Rn.11080 ProteinModelPortal:P19356 STRING:P19356
PRIDE:P19356 UCSC:RGD:2801 InParanoid:P19356 SABIO-RK:P19356
ArrayExpress:P19356 Genevestigator:P19356
GermOnline:ENSRNOG00000010390 GO:GO:0033014 Uniprot:P19356
Length = 361
Score = 332 (121.9 bits), Expect = 4.9e-30, P = 4.9e-30
Identities = 73/182 (40%), Positives = 113/182 (62%)
Query: 14 QIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILP 73
+I+ + TTGDKIL L+ IG K LFTKE++ AL +++D+ VHS+KDVPT LP +
Sbjct: 52 EIIAMSTTGDKILDTALSKIGEKSLFTKELENALEKNEVDLVVHSLKDVPTILPPGFTIG 111
Query: 74 CNLQREDVRDAFIXX---XXXXXXXXPAGSIVGTASLRRKSQILHRYPSLKVMENFRGNV 130
+RE+ DA + P S VGT+SLRR +Q+ ++P L+ ++ RGN+
Sbjct: 112 AICKRENPCDAVVFHPKFIGKTLETLPEKSAVGTSSLRRVAQLQRKFPHLE-FKSIRGNL 170
Query: 131 QTRLRKLNERV-VQATLLALAGLKRLSMTENVTNILSVDDMLPAVAQGAIGIACRSNDEK 189
TRLRKL+E++ A +LA+AGL+R+ V IL ++ + AV QGA+ + R+ D+
Sbjct: 171 NTRLRKLDEQLEFSAIILAVAGLQRMGWQNRVGQILHPEECMYAVGQGALAVEVRAKDQD 230
Query: 190 MV 191
++
Sbjct: 231 IL 232
>MGI|MGI:96112 [details] [associations]
symbol:Hmbs "hydroxymethylbilane synthase" species:10090 "Mus
musculus" [GO:0000793 "condensed chromosome" evidence=ISO]
[GO:0004418 "hydroxymethylbilane synthase activity" evidence=ISO]
[GO:0004852 "uroporphyrinogen-III synthase activity" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0006779 "porphyrin-containing compound
biosynthetic process" evidence=IEA] [GO:0006783 "heme biosynthetic
process" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0018160 "peptidyl-pyrromethane cofactor linkage"
evidence=IEA] [GO:0030424 "axon" evidence=ISO] [GO:0031406
"carboxylic acid binding" evidence=ISO] [GO:0033014 "tetrapyrrole
biosynthetic process" evidence=ISO] [GO:0043176 "amine binding"
evidence=ISO] [GO:0050662 "coenzyme binding" evidence=ISO]
InterPro:IPR000860 InterPro:IPR022417 InterPro:IPR022418
InterPro:IPR022419 Pfam:PF01379 Pfam:PF03900 PIRSF:PIRSF001438
PRINTS:PR00151 PROSITE:PS00533 UniPathway:UPA00251 MGI:MGI:96112
GO:GO:0005634 GO:GO:0005737 GO:GO:0071236 GO:GO:0071549
GO:GO:0042493 GO:GO:0032355 GO:GO:0010043 GO:GO:0050662
GO:GO:0031100 GO:GO:0030424 GO:GO:0031406 GO:GO:0001666
GO:GO:0009743 GO:GO:0000793 GO:GO:0043176 GO:GO:0043200
GO:GO:0071243 GO:GO:0051597 GO:GO:0071418 GO:GO:0032025
GO:GO:0006782 GO:GO:0071345 GO:GO:0071284 eggNOG:COG0181 KO:K01749
GO:GO:0004418 GO:GO:0018160 Gene3D:3.30.160.40 PANTHER:PTHR11557
SUPFAM:SSF54782 TIGRFAMs:TIGR00212 HOGENOM:HOG000228587 OMA:CLAERAF
CTD:3145 GeneTree:ENSGT00390000009083 HOVERGEN:HBG000967
OrthoDB:EOG4QJRNF GO:GO:0004852 GO:GO:0048708 GO:GO:0033273
EMBL:M28666 EMBL:M28663 EMBL:M28664 EMBL:M28665 EMBL:AK166734
EMBL:AK167702 IPI:IPI00133589 IPI:IPI00230382 PIR:A36513
RefSeq:NP_038579.2 UniGene:Mm.247676 ProteinModelPortal:P22907
SMR:P22907 STRING:P22907 PaxDb:P22907 PRIDE:P22907
Ensembl:ENSMUST00000077353 Ensembl:ENSMUST00000097558 GeneID:15288
KEGG:mmu:15288 InParanoid:Q3TIV0 NextBio:287927 Bgee:P22907
CleanEx:MM_HMBS Genevestigator:P22907 GermOnline:ENSMUSG00000032126
Uniprot:P22907
Length = 361
Score = 331 (121.6 bits), Expect = 6.2e-30, P = 6.2e-30
Identities = 79/207 (38%), Positives = 122/207 (58%)
Query: 2 ALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKD 61
AL+P + E I+ + TTGDKIL L+ IG K LFTKE++ AL +++D+ VHS+KD
Sbjct: 44 ALYPGIQFE----IIAMSTTGDKILDTALSKIGEKSLFTKELENALEKNEVDLVVHSLKD 99
Query: 62 VPTYLPEKTILPCNLQREDVRDAFIXX---XXXXXXXXPAGSIVGTASLRRKSQILHRYP 118
VPT LP + +RE+ DA + P S VGT+SLRR +Q+ ++P
Sbjct: 100 VPTILPPGFTIGAICKRENPCDAVVFHPKFIGKTLETLPEKSAVGTSSLRRVAQLQRKFP 159
Query: 119 SLKVMENFRGNVQTRLRKLNE-RVVQATLLALAGLKRLSMTENVTNILSVDDMLPAVAQG 177
L+ ++ RGN+ TRLRKL+E + A +LA+AGL+R+ V IL ++ + AV QG
Sbjct: 160 HLE-FKSIRGNLNTRLRKLDELQEFSAIVLAVAGLQRMGWQNRVGQILHPEECMYAVGQG 218
Query: 178 AIGIACRSNDEKMVPFTT--HSQASIL 202
A+ + R+ D+ ++ + H ++L
Sbjct: 219 ALAVEVRAKDQDILDLVSVLHDPETLL 245
>UNIPROTKB|Q5M893 [details] [associations]
symbol:Hmbs "Hydroxymethylbilane synthase" species:10116
"Rattus norvegicus" [GO:0004418 "hydroxymethylbilane synthase
activity" evidence=IEA] [GO:0018160 "peptidyl-pyrromethane cofactor
linkage" evidence=IEA] [GO:0033014 "tetrapyrrole biosynthetic
process" evidence=IEA] HAMAP:MF_00260 InterPro:IPR000860
InterPro:IPR022417 InterPro:IPR022418 InterPro:IPR022419
Pfam:PF01379 Pfam:PF03900 PIRSF:PIRSF001438 PRINTS:PR00151
PROSITE:PS00533 RGD:2801 GO:GO:0006779 KO:K01749 GO:GO:0004418
GO:GO:0018160 Gene3D:3.30.160.40 PANTHER:PTHR11557 SUPFAM:SSF54782
TIGRFAMs:TIGR00212 OMA:CLAERAF CTD:3145
GeneTree:ENSGT00390000009083 HOVERGEN:HBG000967 IPI:IPI00551682
UniGene:Rn.11080 EMBL:BC088162 RefSeq:NP_037300.2 STRING:Q5M893
Ensembl:ENSRNOT00000014127 GeneID:25709 KEGG:rno:25709
InParanoid:Q5M893 NextBio:607767 Genevestigator:Q5M893
Uniprot:Q5M893
Length = 361
Score = 329 (120.9 bits), Expect = 1.0e-29, P = 1.0e-29
Identities = 73/182 (40%), Positives = 112/182 (61%)
Query: 14 QIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILP 73
+I+ + TTGDKIL L+ IG K LFTKE++ AL +++D+ VHS+KDVPT LP +
Sbjct: 52 EIIAMSTTGDKILDTALSKIGEKSLFTKELENALEKNEVDLVVHSLKDVPTILPPGFTIG 111
Query: 74 CNLQREDVRDAFIXX---XXXXXXXXPAGSIVGTASLRRKSQILHRYPSLKVMENFRGNV 130
+RE+ DA + P S VGT+SLRR +Q+ ++P L+ ++ RGN+
Sbjct: 112 AICKRENPCDAVVFHPKFIGKTLETLPEKSAVGTSSLRRVAQLQRKFPHLE-FKSIRGNL 170
Query: 131 QTRLRKLNE-RVVQATLLALAGLKRLSMTENVTNILSVDDMLPAVAQGAIGIACRSNDEK 189
TRLRKL+E + A +LA+AGL+R+ V IL ++ + AV QGA+ + R+ D+
Sbjct: 171 NTRLRKLDELQEFSAIILAVAGLQRMGWQNRVGQILHPEECMYAVGQGALAVEVRAKDQD 230
Query: 190 MV 191
++
Sbjct: 231 IL 232
>SGD|S000002364 [details] [associations]
symbol:HEM3 "Porphobilinogen deaminase" species:4932
"Saccharomyces cerevisiae" [GO:0004418 "hydroxymethylbilane
synthase activity" evidence=IEA;IMP] [GO:0006783 "heme biosynthetic
process" evidence=IEA;IMP] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0016740 "transferase
activity" evidence=IEA] [GO:0006779 "porphyrin-containing compound
biosynthetic process" evidence=IEA] [GO:0006782 "protoporphyrinogen
IX biosynthetic process" evidence=IEA] [GO:0033014 "tetrapyrrole
biosynthetic process" evidence=IEA] [GO:0018160
"peptidyl-pyrromethane cofactor linkage" evidence=IEA]
InterPro:IPR000860 InterPro:IPR022417 InterPro:IPR022418
InterPro:IPR022419 Pfam:PF01379 Pfam:PF03900 PIRSF:PIRSF001438
PRINTS:PR00151 PROSITE:PS00533 UniPathway:UPA00251 SGD:S000002364
GO:GO:0005634 GO:GO:0005737 EMBL:BK006938 EMBL:X99000 GO:GO:0006783
GO:GO:0006782 eggNOG:COG0181 KO:K01749 GO:GO:0004418 GO:GO:0018160
Gene3D:3.30.160.40 PANTHER:PTHR11557 SUPFAM:SSF54782
TIGRFAMs:TIGR00212 HOGENOM:HOG000228587
GeneTree:ENSGT00390000009083 OMA:QPLRGNV OrthoDB:EOG4KH644
EMBL:Z11745 EMBL:Z74253 EMBL:AY899249 PIR:S25071 RefSeq:NP_010076.1
ProteinModelPortal:P28789 SMR:P28789 STRING:P28789 PaxDb:P28789
PeptideAtlas:P28789 PRIDE:P28789 EnsemblFungi:YDL205C GeneID:851322
KEGG:sce:YDL205C CYGD:YDL205c NextBio:968366 Genevestigator:P28789
GermOnline:YDL205C Uniprot:P28789
Length = 327
Score = 318 (117.0 bits), Expect = 1.5e-28, P = 1.5e-28
Identities = 74/187 (39%), Positives = 108/187 (57%)
Query: 14 QIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINS----QIDIAVHSMKDVPTYLPEK 69
++ ++T GD+I +PL GGK L+TKE+++ L + ++D+ VHS+KD+PT LPE
Sbjct: 37 KVFTLQTLGDQIQFKPLYSFGGKALWTKELEDHLYHDDPSKKLDLIVHSLKDMPTLLPEG 96
Query: 70 TILPCNLQREDVRDAFIX---XXXXXXXXXPAGSIVGTASLRRKSQILHRYPSLKVMENF 126
L +R D D + P G IVGT+S+RR +Q+ +YP LK E+
Sbjct: 97 FELGGITKRVDPTDCLVMPFYSAYKSLDDLPDGGIVGTSSVRRSAQLKRKYPHLK-FESV 155
Query: 127 RGNVQTRLRKLNE--RVVQATLLALAGLKRLSMTENVTNILSVDDMLPAVAQGAIGIACR 184
RGN+QTRL+KL++ Q +LA AGL R+ + +T D M AV QGA+GI R
Sbjct: 156 RGNIQTRLQKLDDPKSPYQCIILASAGLMRMGLENRITQRFHSDTMYHAVGQGALGIEIR 215
Query: 185 SNDEKMV 191
D KM+
Sbjct: 216 KGDTKMM 222
>GENEDB_PFALCIPARUM|PFL0480w [details] [associations]
symbol:PFL0480w "porphobilinogen deaminase,
putative" species:5833 "Plasmodium falciparum" [GO:0020011
"apicoplast" evidence=IDA] InterPro:IPR000860 InterPro:IPR022417
InterPro:IPR022418 Pfam:PF01379 Pfam:PF03900 PRINTS:PR00151
EMBL:AE014188 GO:GO:0020011 KO:K01749 GO:GO:0004418
Gene3D:3.30.160.40 PANTHER:PTHR11557 SUPFAM:SSF54782 HSSP:P06983
ProtClustDB:CLSZ2430242 GO:GO:0033014 GenomeReviews:AE014188_GR
RefSeq:XP_001350505.1 ProteinModelPortal:Q8I5V3
EnsemblProtists:PFL0480w:mRNA GeneID:811149 KEGG:pfa:PFL0480w
EuPathDB:PlasmoDB:PF3D7_1209600 HOGENOM:HOG000281189 OMA:RENINTG
Uniprot:Q8I5V3
Length = 435
Score = 199 (75.1 bits), Expect = 1.4e-27, Sum P(2) = 1.4e-27
Identities = 39/70 (55%), Positives = 50/70 (71%)
Query: 18 IKTTGDKIL-SQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNL 76
IKTTGD IL S+ + GGKG+FTKE+DE LIN +D+ VHS+KDVP LP L C L
Sbjct: 101 IKTTGDNILDSKSVGLYGGKGIFTKELDEQLINGNVDLCVHSLKDVPILLPNNIELSCFL 160
Query: 77 QREDVRDAFI 86
+R+ + DAF+
Sbjct: 161 KRDTINDAFL 170
Score = 138 (53.6 bits), Expect = 1.4e-27, Sum P(2) = 1.4e-27
Identities = 28/64 (43%), Positives = 44/64 (68%)
Query: 102 VGTASLRRKSQILHRYPSLKVMENFRGNVQTRLRKLNERVVQATLLALAGLKRLSMTENV 161
+GT+SLRR+SQI +RY ++ V N RGN+ TR+ KL V A ++A+ G++RL N+
Sbjct: 210 IGTSSLRRRSQIKNRYKNIYV-NNIRGNINTRIEKLYNGEVDALIIAMCGIERLIKKANL 268
Query: 162 TNIL 165
++L
Sbjct: 269 KHLL 272
Score = 36 (17.7 bits), Expect = 6.2e-17, Sum P(2) = 6.2e-17
Identities = 13/56 (23%), Positives = 26/56 (46%)
Query: 127 RGNVQTRLR-KLNERVVQATLLALAGLKRLSMTENVTNILSVDDMLPAVAQGAIGI 181
+ N++ L+ K + + Q LL K + + L+ + + PA+ QG I +
Sbjct: 265 KANLKHLLKNKEQKNICQPFLLKCNNKKCIDLCHVNIQKLNKNLIYPALGQGIIAV 320
>UNIPROTKB|Q8I5V3 [details] [associations]
symbol:PBGD "Porphobilinogen deaminase" species:36329
"Plasmodium falciparum 3D7" [GO:0020011 "apicoplast" evidence=IDA]
InterPro:IPR000860 InterPro:IPR022417 InterPro:IPR022418
Pfam:PF01379 Pfam:PF03900 PRINTS:PR00151 EMBL:AE014188
GO:GO:0020011 KO:K01749 GO:GO:0004418 Gene3D:3.30.160.40
PANTHER:PTHR11557 SUPFAM:SSF54782 HSSP:P06983
ProtClustDB:CLSZ2430242 GO:GO:0033014 GenomeReviews:AE014188_GR
RefSeq:XP_001350505.1 ProteinModelPortal:Q8I5V3
EnsemblProtists:PFL0480w:mRNA GeneID:811149 KEGG:pfa:PFL0480w
EuPathDB:PlasmoDB:PF3D7_1209600 HOGENOM:HOG000281189 OMA:RENINTG
Uniprot:Q8I5V3
Length = 435
Score = 199 (75.1 bits), Expect = 1.4e-27, Sum P(2) = 1.4e-27
Identities = 39/70 (55%), Positives = 50/70 (71%)
Query: 18 IKTTGDKIL-SQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNL 76
IKTTGD IL S+ + GGKG+FTKE+DE LIN +D+ VHS+KDVP LP L C L
Sbjct: 101 IKTTGDNILDSKSVGLYGGKGIFTKELDEQLINGNVDLCVHSLKDVPILLPNNIELSCFL 160
Query: 77 QREDVRDAFI 86
+R+ + DAF+
Sbjct: 161 KRDTINDAFL 170
Score = 138 (53.6 bits), Expect = 1.4e-27, Sum P(2) = 1.4e-27
Identities = 28/64 (43%), Positives = 44/64 (68%)
Query: 102 VGTASLRRKSQILHRYPSLKVMENFRGNVQTRLRKLNERVVQATLLALAGLKRLSMTENV 161
+GT+SLRR+SQI +RY ++ V N RGN+ TR+ KL V A ++A+ G++RL N+
Sbjct: 210 IGTSSLRRRSQIKNRYKNIYV-NNIRGNINTRIEKLYNGEVDALIIAMCGIERLIKKANL 268
Query: 162 TNIL 165
++L
Sbjct: 269 KHLL 272
Score = 36 (17.7 bits), Expect = 6.2e-17, Sum P(2) = 6.2e-17
Identities = 13/56 (23%), Positives = 26/56 (46%)
Query: 127 RGNVQTRLR-KLNERVVQATLLALAGLKRLSMTENVTNILSVDDMLPAVAQGAIGI 181
+ N++ L+ K + + Q LL K + + L+ + + PA+ QG I +
Sbjct: 265 KANLKHLLKNKEQKNICQPFLLKCNNKKCIDLCHVNIQKLNKNLIYPALGQGIIAV 320
>UNIPROTKB|G3V1P4 [details] [associations]
symbol:HMBS "Hydroxymethylbilane synthase, isoform CRA_c"
species:9606 "Homo sapiens" [GO:0004418 "hydroxymethylbilane
synthase activity" evidence=IEA] [GO:0033014 "tetrapyrrole
biosynthetic process" evidence=IEA] InterPro:IPR000860
InterPro:IPR022417 InterPro:IPR022418 Pfam:PF01379 Pfam:PF03900
PIRSF:PIRSF001438 PRINTS:PR00151 EMBL:CH471065 KO:K01749
GO:GO:0004418 Gene3D:3.30.160.40 PANTHER:PTHR11557 SUPFAM:SSF54782
TIGRFAMs:TIGR00212 CTD:3145 UniGene:Hs.82609 GeneID:3145
KEGG:hsa:3145 HGNC:HGNC:4982 GO:GO:0033014 EMBL:AP003391
EMBL:AP003392 RefSeq:NP_001245138.1 ProteinModelPortal:G3V1P4
SMR:G3V1P4 PRIDE:G3V1P4 Ensembl:ENST00000542729 ArrayExpress:G3V1P4
Bgee:G3V1P4 Uniprot:G3V1P4
Length = 304
Score = 302 (111.4 bits), Expect = 7.3e-27, P = 7.3e-27
Identities = 68/167 (40%), Positives = 101/167 (60%)
Query: 14 QIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILP 73
+I+ + TTGDKIL L+ IG K LFTKE++ AL +++D+ VHS+KD+PT LP +
Sbjct: 35 EIIAMSTTGDKILDTALSKIGEKSLFTKELEHALEKNEVDLVVHSLKDLPTVLPPGFTIG 94
Query: 74 CNLQREDVRDAFIXX---XXXXXXXXPAGSIVGTASLRRKSQILHRYPSLKVMENFRGNV 130
+RE+ DA + P S+VGT+SLRR +Q+ ++P L+ + RGN+
Sbjct: 95 AICKRENPHDAVVFHPKFVGKTLETLPEKSVVGTSSLRRAAQLQRKFPHLE-FRSIRGNL 153
Query: 131 QTRLRKLNERV-VQATLLALAGLKRLSMTENVTNILSVDDMLPAVAQ 176
TRLRKL+E+ A +LA AGL+R+ V IL ++ + AV Q
Sbjct: 154 NTRLRKLDEQQEFSAIILATAGLQRMGWHNRVGQILHPEECMYAVGQ 200
>UNIPROTKB|G5EA58 [details] [associations]
symbol:HMBS "Porphobilinogen deaminase" species:9606 "Homo
sapiens" [GO:0004418 "hydroxymethylbilane synthase activity"
evidence=IEA] [GO:0033014 "tetrapyrrole biosynthetic process"
evidence=IEA] InterPro:IPR000860 InterPro:IPR022417
InterPro:IPR022418 Pfam:PF01379 Pfam:PF03900 PIRSF:PIRSF001438
PRINTS:PR00151 EMBL:CH471065 KO:K01749 GO:GO:0004418
Gene3D:3.30.160.40 PANTHER:PTHR11557 SUPFAM:SSF54782
TIGRFAMs:TIGR00212 CTD:3145 UniGene:Hs.82609 GeneID:3145
KEGG:hsa:3145 HGNC:HGNC:4982 GO:GO:0033014 EMBL:AP003391
EMBL:AP003392 RefSeq:NP_001245137.1 ProteinModelPortal:G5EA58
SMR:G5EA58 PRIDE:G5EA58 Ensembl:ENST00000544387 ArrayExpress:G5EA58
Bgee:G5EA58 Uniprot:G5EA58
Length = 321
Score = 302 (111.4 bits), Expect = 7.3e-27, P = 7.3e-27
Identities = 68/167 (40%), Positives = 101/167 (60%)
Query: 14 QIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILP 73
+I+ + TTGDKIL L+ IG K LFTKE++ AL +++D+ VHS+KD+PT LP +
Sbjct: 52 EIIAMSTTGDKILDTALSKIGEKSLFTKELEHALEKNEVDLVVHSLKDLPTVLPPGFTIG 111
Query: 74 CNLQREDVRDAFIXX---XXXXXXXXPAGSIVGTASLRRKSQILHRYPSLKVMENFRGNV 130
+RE+ DA + P S+VGT+SLRR +Q+ ++P L+ + RGN+
Sbjct: 112 AICKRENPHDAVVFHPKFVGKTLETLPEKSVVGTSSLRRAAQLQRKFPHLE-FRSIRGNL 170
Query: 131 QTRLRKLNERV-VQATLLALAGLKRLSMTENVTNILSVDDMLPAVAQ 176
TRLRKL+E+ A +LA AGL+R+ V IL ++ + AV Q
Sbjct: 171 NTRLRKLDEQQEFSAIILATAGLQRMGWHNRVGQILHPEECMYAVGQ 217
>ASPGD|ASPL0000052688 [details] [associations]
symbol:hemC species:162425 "Emericella nidulans"
[GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0004418 "hydroxymethylbilane synthase activity"
evidence=IEA] [GO:0018160 "peptidyl-pyrromethane cofactor linkage"
evidence=IEA] [GO:0006783 "heme biosynthetic process" evidence=IEA]
InterPro:IPR000860 InterPro:IPR022417 InterPro:IPR022418
InterPro:IPR022419 Pfam:PF01379 Pfam:PF03900 PIRSF:PIRSF001438
PRINTS:PR00151 PROSITE:PS00533 EMBL:BN001308 GO:GO:0004418
GO:GO:0018160 Gene3D:3.30.160.40 PANTHER:PTHR11557 SUPFAM:SSF54782
TIGRFAMs:TIGR00212 OMA:CLAERAF GO:GO:0033014
EnsemblFungi:CADANIAT00002626 Uniprot:C8VQK3
Length = 347
Score = 301 (111.0 bits), Expect = 9.4e-27, P = 9.4e-27
Identities = 73/179 (40%), Positives = 103/179 (57%)
Query: 19 KTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQR 78
+T GD+ + L D K L+T+E+++ L +D+ VHS+KDVPT LP L ++R
Sbjct: 54 ETAGDQNTTIALRDFTTKNLWTQELEDLLEAGSVDLIVHSLKDVPTLLPTSCTLGPMMKR 113
Query: 79 EDVRDAFIXXXXX---XXXXXPAGSIVGTASLRRKSQILHRYPSLKVMENFRGNVQTRLR 135
ED RD + PAGS+VGT+S+RR +Q+ +YP LKVM+ RGN+ TRL
Sbjct: 114 EDSRDGLVIKKGLPNMSLAEMPAGSVVGTSSIRRTAQLARKYPHLKVMD-VRGNIGTRLA 172
Query: 136 KLNERVVQAT--LLALAGLKRLSMTENVTNILSVDD--MLPAVAQGAIGIACRSNDEKM 190
KL+ T +LA AGL RL + + + L + ML AV QGA+GI R D+ M
Sbjct: 173 KLDAEDSPYTCLILAAAGLLRLGLGDRIYQYLDSRNAGMLYAVGQGALGIEIRKGDKAM 231
>UNIPROTKB|F5H345 [details] [associations]
symbol:HMBS "Porphobilinogen deaminase" species:9606 "Homo
sapiens" [GO:0004418 "hydroxymethylbilane synthase activity"
evidence=IEA] [GO:0018160 "peptidyl-pyrromethane cofactor linkage"
evidence=IEA] [GO:0033014 "tetrapyrrole biosynthetic process"
evidence=IEA] InterPro:IPR000860 InterPro:IPR022417
InterPro:IPR022418 InterPro:IPR022419 Pfam:PF01379 Pfam:PF03900
PIRSF:PIRSF001438 PRINTS:PR00151 PROSITE:PS00533 GO:GO:0004418
GO:GO:0018160 Gene3D:3.30.160.40 PANTHER:PTHR11557 SUPFAM:SSF54782
TIGRFAMs:TIGR00212 HGNC:HGNC:4982 GO:GO:0033014 EMBL:AP003391
EMBL:AP003392 IPI:IPI01012145 ProteinModelPortal:F5H345 SMR:F5H345
Ensembl:ENST00000543090 ArrayExpress:F5H345 Bgee:F5H345
Uniprot:F5H345
Length = 330
Score = 290 (107.1 bits), Expect = 1.4e-25, P = 1.4e-25
Identities = 69/182 (37%), Positives = 105/182 (57%)
Query: 14 QIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILP 73
+I+ + TTGDKIL L+ IG K LFTKE++ AL +++D+ VHS+KD+PT LP +
Sbjct: 34 EIIAMSTTGDKILDTALSKIGEKSLFTKELEHALEKNEVDLVVHSLKDLPTVLPPGFTIG 93
Query: 74 CNLQREDVRDAFIXX---XXXXXXXXPAGSIVGTASLRRKSQILHRYPSLKVMENFRGNV 130
+RE+ DA + P S+VGT+SLRR +Q+ ++P L+ + RGN+
Sbjct: 94 AICKRENPHDAVVFHPKFVGKTLETLPEKSVVGTSSLRRAAQLQRKFPHLE-FRSIRGNL 152
Query: 131 QTRLRKLNERV-VQATLLALAGLKRLSMTENVTNILSVDDMLPAVAQGAIGIACRSNDEK 189
TRLRKL+E+ A +LA AGL+R+ V QGA+G+ R+ D+
Sbjct: 153 NTRLRKLDEQQEFSAIILATAGLQRMGWHNRV-------------GQGALGVEVRAKDQD 199
Query: 190 MV 191
++
Sbjct: 200 IL 201
>TIGR_CMR|NSE_0385 [details] [associations]
symbol:NSE_0385 "putative porphobilinogen deaminase"
species:222891 "Neorickettsia sennetsu str. Miyayama" [GO:0004418
"hydroxymethylbilane synthase activity" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0006779 "porphyrin-containing
compound biosynthetic process" evidence=ISS] InterPro:IPR000860
InterPro:IPR022417 InterPro:IPR022418 InterPro:IPR022419
Pfam:PF01379 Pfam:PF03900 PIRSF:PIRSF001438 PRINTS:PR00151
PROSITE:PS00533 UniPathway:UPA00251 EMBL:CP000237
GenomeReviews:CP000237_GR GO:GO:0006782 eggNOG:COG0181 KO:K01749
GO:GO:0004418 GO:GO:0018160 Gene3D:3.30.160.40 PANTHER:PTHR11557
SUPFAM:SSF54782 TIGRFAMs:TIGR00212 HOGENOM:HOG000228587 OMA:CLAERAF
RefSeq:YP_506274.1 ProteinModelPortal:Q2GE22 STRING:Q2GE22
GeneID:3931854 KEGG:nse:NSE_0385 PATRIC:22680835
ProtClustDB:CLSK2528160 BioCyc:NSEN222891:GHFU-410-MONOMER
Uniprot:Q2GE22
Length = 286
Score = 288 (106.4 bits), Expect = 2.2e-25, P = 2.2e-25
Identities = 67/187 (35%), Positives = 105/187 (56%)
Query: 2 ALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKD 61
AL P A+ +++ KT+GD + PL ++GGK LF KE++E L+ +IDIAVHSMKD
Sbjct: 24 ALAPYCARTDLVEV---KTSGDIVSDVPLTEVGGKALFLKELEEKLLTGEIDIAVHSMKD 80
Query: 62 VPT-YLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRRKSQILHRYPSL 120
VP Y + ++P L+R D F+ P G+++GT + RR Q+ R+
Sbjct: 81 VPAFYHDDLEVVPV-LKRAIPNDVFVSFRYPNMLSLPNGAVIGTCAPRRVVQLNQRF--- 136
Query: 121 KVMENFRGNVQTRLRKLNERVVQATLLALAGLKRLSMTENVTNILSVDDMLPAVAQGAIG 180
+V+ RGN+ TR+ K + +LA L+RL + ++ ++ + MLP VAQGA+
Sbjct: 137 RVIP-LRGNIATRIEKAKN--LDGIILAFCALERLGLRRMISEVIHENVMLPGVAQGALC 193
Query: 181 IACRSND 187
+ R D
Sbjct: 194 VEFRKKD 200
>UNIPROTKB|P64336 [details] [associations]
symbol:hemC "Porphobilinogen deaminase" species:1773
"Mycobacterium tuberculosis" [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0040007 "growth" evidence=IMP] HAMAP:MF_00260
InterPro:IPR000860 InterPro:IPR022417 InterPro:IPR022418
InterPro:IPR022419 Pfam:PF01379 Pfam:PF03900 PIRSF:PIRSF001438
PRINTS:PR00151 PROSITE:PS00533 UniPathway:UPA00251 GO:GO:0005886
GO:GO:0040007 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR EMBL:BX842573 GO:GO:0006782
eggNOG:COG0181 HOGENOM:HOG000228588 KO:K01749 GO:GO:0004418
GO:GO:0018160 Gene3D:3.30.160.40 PANTHER:PTHR11557 SUPFAM:SSF54782
TIGRFAMs:TIGR00212 OMA:CLAERAF ProtClustDB:PRK00072 PIR:A70747
RefSeq:NP_215024.1 RefSeq:NP_334940.1 RefSeq:YP_006513843.1
ProteinModelPortal:P64336 SMR:P64336 PRIDE:P64336
EnsemblBacteria:EBMYCT00000000916 EnsemblBacteria:EBMYCT00000072383
GeneID:13318384 GeneID:887306 GeneID:924164 KEGG:mtc:MT0531
KEGG:mtu:Rv0510 KEGG:mtv:RVBD_0510 PATRIC:18122878
TubercuList:Rv0510 Uniprot:P64336
Length = 309
Score = 287 (106.1 bits), Expect = 2.9e-25, P = 2.9e-25
Identities = 67/178 (37%), Positives = 101/178 (56%)
Query: 14 QIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILP 73
++V I T GD+ ++ P+A +G G+FT + EA+ +D AVHS KD+PT + +
Sbjct: 31 ELVTISTEGDRSMA-PIASLG-VGVFTTALREAMEAGLVDAAVHSYKDLPTAADPRFTVA 88
Query: 74 CNLQREDVRDAFIXXXXXXXXXXPAGSIVGTASLRRKSQILHRYPSLKVMENFRGNVQTR 133
R D RDA + P GS+VGT+S RR +Q+ L++ RGN+ TR
Sbjct: 89 AIPPRNDPRDAVVARDGLTLGELPVGSLVGTSSPRRAAQLRALGLGLEIRP-LRGNLDTR 147
Query: 134 LRKLNERVVQATLLALAGLKRLSMTENVTNILSVDDMLPAVAQGAIGIACRSNDEKMV 191
L K++ + A ++A AGL RL ++VT L MLPA AQGA+ + CR+ D ++V
Sbjct: 148 LNKVSSGDLDAIVVARAGLARLGRLDDVTETLEPVQMLPAPAQGALAVECRAGDSRLV 205
>UNIPROTKB|F5GY90 [details] [associations]
symbol:HMBS "Porphobilinogen deaminase" species:9606 "Homo
sapiens" [GO:0004418 "hydroxymethylbilane synthase activity"
evidence=IEA] [GO:0033014 "tetrapyrrole biosynthetic process"
evidence=IEA] InterPro:IPR000860 InterPro:IPR022417 Pfam:PF01379
PRINTS:PR00151 GO:GO:0005634 GO:GO:0005737 GO:GO:0071236
GO:GO:0071549 GO:GO:0042493 GO:GO:0032355 GO:GO:0010043
GO:GO:0050662 GO:GO:0031100 GO:GO:0030424 GO:GO:0031406
GO:GO:0001666 GO:GO:0009743 GO:GO:0000793 GO:GO:0043176
GO:GO:0043200 GO:GO:0071243 GO:GO:0051597 GO:GO:0071418
GO:GO:0032025 GO:GO:0071345 GO:GO:0071284 GO:GO:0004418
PANTHER:PTHR11557 TIGRFAMs:TIGR00212 HGNC:HGNC:4982 GO:GO:0004852
GO:GO:0048708 GO:GO:0033273 GO:GO:0033014 EMBL:AP003391
EMBL:AP003392 IPI:IPI01010744 SMR:F5GY90 Ensembl:ENST00000535253
Ensembl:ENST00000539986 UCSC:uc009zao.2 Uniprot:F5GY90
Length = 187
Score = 284 (105.0 bits), Expect = 5.9e-25, P = 5.9e-25
Identities = 63/152 (41%), Positives = 93/152 (61%)
Query: 14 QIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILP 73
+I+ + TTGDKIL L+ IG K LFTKE++ AL +++D+ VHS+KD+PT LP +
Sbjct: 35 EIIAMSTTGDKILDTALSKIGEKSLFTKELEHALEKNEVDLVVHSLKDLPTVLPPGFTIG 94
Query: 74 CNLQREDVRDAFIXX---XXXXXXXXPAGSIVGTASLRRKSQILHRYPSLKVMENFRGNV 130
+RE+ DA + P S+VGT+SLRR +Q+ ++P L+ + RGN+
Sbjct: 95 AICKRENPHDAVVFHPKFVGKTLETLPEKSVVGTSSLRRAAQLQRKFPHLE-FRSIRGNL 153
Query: 131 QTRLRKLNERV-VQATLLALAGLKRLSMTENV 161
TRLRKL+E+ A +LA AGL+R+ V
Sbjct: 154 NTRLRKLDEQQEFSAIILATAGLQRMGWHNRV 185
>UNIPROTKB|G4N2C1 [details] [associations]
symbol:MGG_04860 "Porphobilinogen deaminase" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR000860 InterPro:IPR022417
InterPro:IPR022418 InterPro:IPR022419 Pfam:PF01379 Pfam:PF03900
PIRSF:PIRSF001438 PRINTS:PR00151 PROSITE:PS00533 EMBL:CM001233
KO:K01749 GO:GO:0004418 GO:GO:0018160 Gene3D:3.30.160.40
PANTHER:PTHR11557 SUPFAM:SSF54782 TIGRFAMs:TIGR00212 GO:GO:0033014
RefSeq:XP_003712340.1 ProteinModelPortal:G4N2C1
EnsemblFungi:MGG_04860T0 GeneID:2675497 KEGG:mgr:MGG_04860
Uniprot:G4N2C1
Length = 340
Score = 277 (102.6 bits), Expect = 3.3e-24, P = 3.3e-24
Identities = 71/196 (36%), Positives = 103/196 (52%)
Query: 4 HPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVP 63
HP++ E + I T GDK PL +G KG++T E++ L ++D VH +KD+P
Sbjct: 32 HPDITFE----VNAIATQGDKDKVSPLPSMG-KGMWTNELEAMLTTGEVDFIVHCLKDMP 86
Query: 64 TYLPEKTILPCNLQREDVRDAFIX------XXXXXXXXXPAGSIVGTASLRRKSQILHRY 117
T LP+ L ++RED RD + P GS+VGT+S RR SQ+ Y
Sbjct: 87 TTLPDNCELGAVMEREDPRDVVVIKPKHVQAGCKTIADLPKGSLVGTSSPRRSSQLKRWY 146
Query: 118 PSLKVMENFRGNVQTRLRKLN--ERVVQATLLALAGLKRLSMTENVTNIL-SVDD---ML 171
P L+ ++RGN+ TRLRKL+ + +LA AGL R+ + L S + +L
Sbjct: 147 PELR-FRDYRGNIDTRLRKLDAEDGEFDCIILAAAGLHRMDQHSRIAQYLDSTTEGGGVL 205
Query: 172 PAVAQGAIGIACRSND 187
AV QGA+G+ R D
Sbjct: 206 HAVGQGALGLEVRKGD 221
>POMBASE|SPAC24B11.13 [details] [associations]
symbol:hem3 "hydroxymethylbilane synthase (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0004418
"hydroxymethylbilane synthase activity" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS;IDA]
[GO:0006783 "heme biosynthetic process" evidence=ISS] [GO:0018160
"peptidyl-pyrromethane cofactor linkage" evidence=IEA]
InterPro:IPR000860 InterPro:IPR022417 InterPro:IPR022418
InterPro:IPR022419 Pfam:PF01379 Pfam:PF03900 PIRSF:PIRSF001438
PRINTS:PR00151 PROSITE:PS00533 UniPathway:UPA00251
PomBase:SPAC24B11.13 GO:GO:0005634 GO:GO:0005737 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0006783 GO:GO:0006782
eggNOG:COG0181 KO:K01749 OMA:NGSCDTP GO:GO:0004418 GO:GO:0018160
Gene3D:3.30.160.40 PANTHER:PTHR11557 SUPFAM:SSF54782
TIGRFAMs:TIGR00212 HOGENOM:HOG000228587 EMBL:D89238 PIR:T39093
RefSeq:NP_001018179.1 ProteinModelPortal:Q09899 STRING:Q09899
PRIDE:Q09899 EnsemblFungi:SPAC24B11.13.1 GeneID:3361383
KEGG:spo:SPAC24B11.13 OrthoDB:EOG4KH644 NextBio:20811433
Uniprot:Q09899
Length = 336
Score = 271 (100.5 bits), Expect = 1.4e-23, P = 1.4e-23
Identities = 62/185 (33%), Positives = 107/185 (57%)
Query: 15 IVIIKTTGDKILSQPLADIG---GKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTI 71
I+ T GD+ILS+ L + K L+T+E++ L+ +Q I VHS+KD+P+ +P+ +
Sbjct: 39 IISRDTIGDEILSKALFEFKRQLAKSLWTRELEALLVTNQCRILVHSLKDLPSEMPDGMV 98
Query: 72 LPCNLQREDVRDAFIXXXXX---XXXXXPAGSIVGTASLRRKSQILHRYPSLKVMENFRG 128
+ C +R DA + P GS+VGT+S+RR++ + +P L+ ++ RG
Sbjct: 99 IACIPKRSCPLDAIVFKAGSHYKTVADLPPGSVVGTSSIRRRALLARNFPHLRFVD-IRG 157
Query: 129 NVQTRLRKLN--ERVVQATLLALAGLKRLSMTENVTNILSVDDMLPAVAQGAIGIACRSN 186
NV TRL KL+ + +LA AGL RL + + + +L+ + AV QGA+ + R++
Sbjct: 158 NVGTRLAKLDAPDSQFDCLVLAAAGLFRLGLKDRIAQMLTAPFVYYAVGQGALAVEVRAD 217
Query: 187 DEKMV 191
D++M+
Sbjct: 218 DKEMI 222
>UNIPROTKB|F5H226 [details] [associations]
symbol:HMBS "Porphobilinogen deaminase" species:9606 "Homo
sapiens" [GO:0004418 "hydroxymethylbilane synthase activity"
evidence=IEA] [GO:0033014 "tetrapyrrole biosynthetic process"
evidence=IEA] InterPro:IPR000860 InterPro:IPR022417 Pfam:PF01379
GO:GO:0004418 PANTHER:PTHR11557 HGNC:HGNC:4982 GO:GO:0033014
EMBL:AP003391 EMBL:AP003392 IPI:IPI01009265
ProteinModelPortal:F5H226 SMR:F5H226 Ensembl:ENST00000546302
ArrayExpress:F5H226 Bgee:F5H226 Uniprot:F5H226
Length = 191
Score = 154 (59.3 bits), Expect = 3.5e-11, P = 3.5e-11
Identities = 39/104 (37%), Positives = 59/104 (56%)
Query: 77 QREDVRDAFIXX---XXXXXXXXPAGSIVGTASLRRKSQILHRYPSLKVMENFRGNVQTR 133
+RE+ DA + P S+VGT+SLRR +Q+ ++P L+ + RGN+ TR
Sbjct: 89 ERENPHDAVVFHPKFVGKTLETLPEKSVVGTSSLRRAAQLQRKFPHLE-FRSIRGNLNTR 147
Query: 134 LRKLNERV-VQATLLALAGLKRLSMTENVTNILSVDDMLPAVAQ 176
LRKL+E+ A +LA AGL+R+ V IL ++ + AV Q
Sbjct: 148 LRKLDEQQEFSAIILATAGLQRMGWHNRVGQILHPEECMYAVGQ 191
>UNIPROTKB|F5H0P4 [details] [associations]
symbol:HMBS "Porphobilinogen deaminase" species:9606 "Homo
sapiens" [GO:0004418 "hydroxymethylbilane synthase activity"
evidence=IEA] [GO:0033014 "tetrapyrrole biosynthetic process"
evidence=IEA] InterPro:IPR000860 InterPro:IPR022417 Pfam:PF01379
PRINTS:PR00151 GO:GO:0004418 PANTHER:PTHR11557 HGNC:HGNC:4982
GO:GO:0033014 EMBL:AP003391 EMBL:AP003392 IPI:IPI01013863
ProteinModelPortal:F5H0P4 SMR:F5H0P4 Ensembl:ENST00000536813
ArrayExpress:F5H0P4 Bgee:F5H0P4 Uniprot:F5H0P4
Length = 119
Score = 146 (56.5 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 29/64 (45%), Positives = 42/64 (65%)
Query: 23 DKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVR 82
DKIL L+ IG K LFTKE++ AL +++D+ VHS+KD+PT LP + +RE+
Sbjct: 55 DKILDTALSKIGEKSLFTKELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPH 114
Query: 83 DAFI 86
DA +
Sbjct: 115 DAVV 118
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.136 0.388 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 237 227 0.00079 113 3 11 22 0.36 33
32 0.41 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 36
No. of states in DFA: 566 (60 KB)
Total size of DFA: 148 KB (2092 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 17.18u 0.12s 17.30t Elapsed: 00:00:01
Total cpu time: 17.19u 0.12s 17.31t Elapsed: 00:00:01
Start: Fri May 10 16:42:53 2013 End: Fri May 10 16:42:54 2013