Query 026503
Match_columns 237
No_of_seqs 125 out of 1334
Neff 9.0
Searched_HMMs 46136
Date Fri Mar 29 08:52:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026503.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/026503hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG3216 Diamine acetyltransfer 100.0 4E-28 8.8E-33 179.4 16.9 161 30-234 2-162 (163)
2 PRK10146 aminoalkylphosphonic 99.8 9.3E-19 2E-23 132.8 11.3 95 122-218 44-138 (144)
3 PF13420 Acetyltransf_4: Acety 99.8 2.2E-17 4.8E-22 126.8 12.9 104 124-232 49-154 (155)
4 PRK10140 putative acetyltransf 99.7 6.4E-17 1.4E-21 124.9 14.3 104 126-233 52-157 (162)
5 TIGR02382 wecD_rffC TDP-D-fuco 99.7 6.1E-17 1.3E-21 129.1 14.2 80 135-219 107-186 (191)
6 PRK03624 putative acetyltransf 99.7 8.5E-17 1.8E-21 120.7 13.7 88 124-219 44-131 (140)
7 COG1247 Sortase and related ac 99.7 1.5E-16 3.3E-21 122.6 12.7 157 32-234 2-160 (169)
8 PTZ00330 acetyltransferase; Pr 99.7 4.8E-16 1E-20 118.2 15.1 82 135-219 60-142 (147)
9 PRK10975 TDP-fucosamine acetyl 99.7 1.4E-15 3E-20 121.5 16.0 80 135-219 110-189 (194)
10 KOG3139 N-acetyltransferase [G 99.7 9.3E-16 2E-20 115.1 13.5 100 125-227 56-155 (165)
11 PF13523 Acetyltransf_8: Acety 99.7 9.6E-16 2.1E-20 117.5 14.0 98 122-221 45-144 (152)
12 TIGR03827 GNAT_ablB putative b 99.7 7.9E-16 1.7E-20 128.9 13.8 102 125-232 158-260 (266)
13 PF00583 Acetyltransf_1: Acety 99.7 9.4E-16 2E-20 105.2 11.1 80 135-214 4-83 (83)
14 TIGR02406 ectoine_EctA L-2,4-d 99.7 1.8E-15 3.9E-20 116.9 13.9 101 127-231 41-142 (157)
15 PLN02706 glucosamine 6-phospha 99.7 1.9E-15 4.2E-20 115.5 13.0 89 127-218 55-144 (150)
16 PRK15130 spermidine N1-acetylt 99.7 2.5E-15 5.5E-20 119.0 14.0 105 122-232 54-160 (186)
17 TIGR03103 trio_acet_GNAT GNAT- 99.7 2.6E-15 5.6E-20 137.1 15.7 102 124-225 122-224 (547)
18 PRK09491 rimI ribosomal-protei 99.7 4.2E-15 9.1E-20 113.2 13.9 83 135-223 48-130 (146)
19 PHA00673 acetyltransferase dom 99.6 2.3E-15 5.1E-20 114.4 11.7 100 116-218 46-146 (154)
20 PRK10809 ribosomal-protein-S5- 99.6 4.6E-15 1E-19 118.4 12.7 107 122-231 72-180 (194)
21 TIGR01575 rimI ribosomal-prote 99.6 1.6E-14 3.5E-19 107.0 11.5 102 116-225 22-123 (131)
22 TIGR03585 PseH pseudaminic aci 99.6 2.1E-14 4.6E-19 110.2 12.2 107 119-232 45-153 (156)
23 PRK07922 N-acetylglutamate syn 99.6 5.2E-14 1.1E-18 110.1 13.7 81 127-219 47-128 (169)
24 PRK09831 putative acyltransfer 99.6 2.4E-14 5.3E-19 109.2 10.7 89 126-235 54-142 (147)
25 PRK10151 ribosomal-protein-L7/ 99.6 1.1E-13 2.4E-18 108.9 14.7 99 127-231 69-169 (179)
26 TIGR01686 FkbH FkbH-like domai 99.6 1.1E-13 2.3E-18 118.9 15.1 132 28-216 183-319 (320)
27 COG0456 RimI Acetyltransferase 99.6 7.3E-14 1.6E-18 109.3 12.8 91 137-227 72-163 (177)
28 PRK10514 putative acetyltransf 99.6 9.5E-14 2.1E-18 105.4 12.7 81 135-231 58-138 (145)
29 PF13673 Acetyltransf_10: Acet 99.5 1.5E-13 3.3E-18 100.2 12.9 83 116-213 35-117 (117)
30 PF13302 Acetyltransf_3: Acety 99.5 4.7E-14 1E-18 106.3 10.5 86 125-214 56-142 (142)
31 PRK07757 acetyltransferase; Pr 99.5 3.2E-13 6.9E-18 103.4 14.1 81 127-219 43-123 (152)
32 TIGR03448 mycothiol_MshD mycot 99.5 8E-13 1.7E-17 111.9 17.3 92 127-221 200-291 (292)
33 PF13527 Acetyltransf_9: Acety 99.5 1.3E-13 2.7E-18 102.3 10.0 84 126-216 42-127 (127)
34 KOG3396 Glucosamine-phosphate 99.5 2.4E-13 5.1E-18 99.1 10.7 136 31-218 6-144 (150)
35 PHA01807 hypothetical protein 99.5 9.7E-13 2.1E-17 100.9 13.6 86 123-211 51-136 (153)
36 PF13508 Acetyltransf_7: Acety 99.5 8.2E-13 1.8E-17 90.0 11.3 77 125-215 3-79 (79)
37 PRK10562 putative acetyltransf 99.5 1.5E-12 3.2E-17 99.1 13.1 77 126-218 49-125 (145)
38 TIGR03448 mycothiol_MshD mycot 99.5 1.6E-12 3.6E-17 110.0 14.7 91 127-228 48-138 (292)
39 COG1246 ArgA N-acetylglutamate 99.5 1E-12 2.2E-17 98.8 11.8 82 127-218 42-123 (153)
40 PLN02825 amino-acid N-acetyltr 99.4 1.3E-12 2.9E-17 117.5 12.8 82 126-217 408-489 (515)
41 COG3153 Predicted acetyltransf 99.4 2.3E-12 4.9E-17 99.7 11.9 134 30-222 2-135 (171)
42 PRK12308 bifunctional arginino 99.4 2.2E-12 4.8E-17 119.7 13.1 83 126-220 504-586 (614)
43 PRK05279 N-acetylglutamate syn 99.4 1.5E-12 3.3E-17 116.5 11.0 82 127-218 336-417 (441)
44 PRK10314 putative acyltransfer 99.4 4.4E-12 9.6E-17 97.5 11.7 87 125-219 48-135 (153)
45 TIGR01890 N-Ac-Glu-synth amino 99.4 2E-12 4.4E-17 115.3 10.9 82 127-218 324-405 (429)
46 PRK01346 hypothetical protein; 99.4 5.2E-12 1.1E-16 112.1 13.5 94 127-227 49-145 (411)
47 PF08445 FR47: FR47-like prote 99.4 2.9E-11 6.3E-16 83.8 12.8 79 131-219 5-83 (86)
48 KOG3235 Subunit of the major N 99.3 1.7E-11 3.7E-16 91.7 10.9 99 128-227 44-144 (193)
49 PRK13688 hypothetical protein; 99.3 2E-11 4.3E-16 94.0 11.0 86 124-219 44-134 (156)
50 KOG2488 Acetyltransferase (GNA 99.3 1.9E-11 4E-16 94.3 8.9 90 127-218 93-182 (202)
51 COG1670 RimL Acetyltransferase 99.2 2.6E-10 5.6E-15 89.3 12.7 85 135-221 76-161 (187)
52 cd02169 Citrate_lyase_ligase C 99.2 8.9E-11 1.9E-15 99.3 10.5 77 126-217 7-83 (297)
53 KOG3138 Predicted N-acetyltran 99.2 4.2E-11 9.1E-16 93.7 6.5 70 156-225 89-159 (187)
54 COG3393 Predicted acetyltransf 99.2 3E-10 6.5E-15 92.4 11.0 83 135-223 185-267 (268)
55 COG3981 Predicted acetyltransf 99.1 2.6E-10 5.7E-15 86.9 8.0 95 135-233 77-171 (174)
56 KOG3234 Acetyltransferase, (GN 99.0 2.6E-09 5.6E-14 80.1 10.4 92 135-228 50-141 (173)
57 TIGR00124 cit_ly_ligase [citra 99.0 3.9E-09 8.5E-14 90.7 12.7 80 125-219 31-110 (332)
58 TIGR01211 ELP3 histone acetylt 99.0 1.1E-08 2.4E-13 92.7 13.3 98 123-223 409-521 (522)
59 PF13718 GNAT_acetyltr_2: GNAT 99.0 3.3E-09 7.3E-14 83.9 8.6 105 112-217 14-175 (196)
60 KOG3397 Acetyltransferases [Ge 98.9 1.1E-08 2.3E-13 78.0 8.8 100 112-219 43-142 (225)
61 KOG4135 Predicted phosphogluco 98.8 1.7E-07 3.7E-12 69.7 12.4 64 155-218 106-170 (185)
62 PF08444 Gly_acyl_tr_C: Aralky 98.8 3.1E-08 6.6E-13 68.0 7.1 73 135-217 7-79 (89)
63 PF12746 GNAT_acetyltran: GNAT 98.8 1E-07 2.3E-12 79.1 11.5 91 127-228 167-257 (265)
64 COG2153 ElaA Predicted acyltra 98.8 1.3E-07 2.8E-12 70.2 10.2 88 123-218 48-136 (155)
65 cd04301 NAT_SF N-Acyltransfera 98.7 1.2E-07 2.6E-12 60.1 8.8 58 135-195 7-64 (65)
66 COG3818 Predicted acetyltransf 98.6 5.2E-07 1.1E-11 65.7 10.0 69 154-222 82-152 (167)
67 COG1444 Predicted P-loop ATPas 98.6 3.8E-07 8.3E-12 85.0 10.8 103 112-217 457-590 (758)
68 KOG4144 Arylalkylamine N-acety 98.4 2.1E-07 4.5E-12 69.7 3.8 83 135-220 70-163 (190)
69 PF14542 Acetyltransf_CG: GCN5 98.3 6E-06 1.3E-10 55.9 8.6 66 135-211 7-72 (78)
70 PF12568 DUF3749: Acetyltransf 98.2 1.5E-05 3.3E-10 58.3 9.6 86 122-217 35-124 (128)
71 COG5628 Predicted acetyltransf 98.1 2.5E-05 5.5E-10 56.1 8.0 92 116-214 28-119 (143)
72 COG2388 Predicted acetyltransf 98.1 1.9E-05 4E-10 55.7 7.2 68 119-193 9-76 (99)
73 COG4552 Eis Predicted acetyltr 97.9 2.7E-05 5.9E-10 66.1 6.9 92 126-225 40-134 (389)
74 COG0454 WecD Histone acetyltra 97.8 3.2E-05 7E-10 54.1 5.0 44 162-213 87-130 (156)
75 COG3053 CitC Citrate lyase syn 97.8 0.00047 1E-08 57.3 12.1 80 127-219 37-116 (352)
76 PF04958 AstA: Arginine N-succ 97.4 0.0014 3E-08 56.4 10.1 119 31-187 1-152 (342)
77 PRK10456 arginine succinyltran 97.4 0.0026 5.6E-08 54.6 10.7 114 32-184 2-147 (344)
78 PF01233 NMT: Myristoyl-CoA:pr 97.3 0.0052 1.1E-07 46.9 10.9 69 127-195 79-149 (162)
79 PF00765 Autoind_synth: Autoin 97.3 0.0036 7.9E-08 49.4 10.5 94 119-217 39-154 (182)
80 PF13480 Acetyltransf_6: Acety 97.3 0.0069 1.5E-07 44.8 11.5 66 124-197 70-135 (142)
81 TIGR03694 exosort_acyl putativ 97.3 0.0072 1.5E-07 49.9 12.2 90 124-216 54-196 (241)
82 PF06852 DUF1248: Protein of u 97.2 0.004 8.7E-08 48.9 9.8 96 118-218 39-137 (181)
83 PRK13834 putative autoinducer 97.1 0.014 3E-07 47.1 12.4 93 120-216 48-163 (207)
84 PHA00432 internal virion prote 97.1 0.0026 5.7E-08 47.3 7.0 51 178-232 82-132 (137)
85 COG3375 Uncharacterized conser 97.1 0.0083 1.8E-07 48.2 10.2 91 123-216 44-135 (266)
86 TIGR03243 arg_catab_AOST argin 97.1 0.0059 1.3E-07 52.3 10.1 114 33-184 1-145 (335)
87 COG1243 ELP3 Histone acetyltra 97.0 0.0014 3.1E-08 57.8 5.6 99 118-221 397-512 (515)
88 TIGR03244 arg_catab_AstA argin 96.9 0.0098 2.1E-07 51.0 10.2 113 33-184 1-145 (336)
89 COG3882 FkbH Predicted enzyme 96.9 0.0044 9.5E-08 55.2 8.0 137 28-219 410-551 (574)
90 TIGR03245 arg_AOST_alph argini 96.9 0.011 2.4E-07 50.7 10.1 114 33-184 1-146 (336)
91 PF05301 Mec-17: Touch recepto 96.9 0.012 2.6E-07 42.6 8.7 74 135-211 17-98 (120)
92 PF13880 Acetyltransf_13: ESCO 96.7 0.0027 5.8E-08 41.7 3.6 28 157-184 6-33 (70)
93 PF02799 NMT_C: Myristoyl-CoA: 96.5 0.088 1.9E-06 41.6 11.6 135 34-224 31-171 (190)
94 TIGR03019 pepcterm_femAB FemAB 96.2 0.12 2.5E-06 44.7 12.4 98 126-231 196-295 (330)
95 COG3916 LasI N-acyl-L-homoseri 96.1 0.16 3.5E-06 40.5 11.3 93 120-216 47-161 (209)
96 COG3138 AstA Arginine/ornithin 95.9 0.027 5.8E-07 46.9 6.5 108 32-177 2-140 (336)
97 cd04264 DUF619-NAGS DUF619 dom 95.8 0.084 1.8E-06 37.3 8.0 66 128-203 11-76 (99)
98 KOG2779 N-myristoyl transferas 95.8 0.2 4.3E-06 43.1 11.3 136 34-224 263-403 (421)
99 KOG2779 N-myristoyl transferas 95.3 0.046 9.9E-07 46.9 5.9 100 110-209 116-223 (421)
100 PRK01305 arginyl-tRNA-protein 94.8 1.8 3.9E-05 35.7 13.9 61 135-201 152-212 (240)
101 cd04265 DUF619-NAGS-U DUF619 d 94.8 0.25 5.4E-06 34.9 7.7 57 137-202 19-75 (99)
102 PF01853 MOZ_SAS: MOZ/SAS fami 94.7 0.22 4.8E-06 39.2 7.9 50 136-190 65-114 (188)
103 KOG2535 RNA polymerase II elon 94.5 0.038 8.2E-07 47.4 3.4 101 118-221 433-550 (554)
104 KOG3698 Hyaluronoglucosaminida 94.5 0.17 3.6E-06 46.3 7.5 54 165-218 825-878 (891)
105 PF13444 Acetyltransf_5: Acety 94.2 0.19 4.2E-06 35.4 6.0 58 120-178 25-100 (101)
106 PF04377 ATE_C: Arginine-tRNA- 94.0 0.41 9E-06 35.5 7.6 57 135-197 47-103 (128)
107 PRK14852 hypothetical protein; 93.9 0.76 1.7E-05 45.2 11.2 96 123-223 73-186 (989)
108 PF11124 Pho86: Inorganic phos 93.5 1.2 2.6E-05 37.7 10.3 84 137-220 179-274 (304)
109 PHA01733 hypothetical protein 93.2 0.23 4.9E-06 37.7 5.1 78 135-219 55-133 (153)
110 PLN03238 probable histone acet 91.9 0.63 1.4E-05 39.1 6.5 50 135-189 139-188 (290)
111 PLN03239 histone acetyltransfe 91.8 0.5 1.1E-05 40.8 6.1 50 135-189 197-246 (351)
112 PTZ00064 histone acetyltransfe 91.4 0.47 1E-05 42.8 5.6 50 135-189 368-417 (552)
113 PF11039 DUF2824: Protein of u 90.8 5.3 0.00011 29.6 10.4 104 122-235 35-149 (151)
114 COG2401 ABC-type ATPase fused 90.8 0.12 2.5E-06 45.9 1.3 63 156-218 241-308 (593)
115 KOG4601 Uncharacterized conser 90.7 1.1 2.3E-05 36.4 6.5 48 136-184 81-136 (264)
116 COG5092 NMT1 N-myristoyl trans 90.7 2.1 4.5E-05 36.5 8.5 66 127-192 134-201 (451)
117 PLN00104 MYST -like histone ac 89.6 0.5 1.1E-05 42.3 4.2 50 135-189 290-339 (450)
118 KOG2696 Histone acetyltransfer 89.3 1.9 4.2E-05 37.4 7.4 81 120-202 176-262 (403)
119 PF11090 DUF2833: Protein of u 89.1 1.5 3.2E-05 29.9 5.3 36 183-219 50-85 (86)
120 PF09390 DUF1999: Protein of u 87.0 9.5 0.00021 28.7 8.9 93 125-226 55-149 (161)
121 PF04768 DUF619: Protein of un 86.7 4.9 0.00011 31.3 7.7 88 137-231 70-159 (170)
122 KOG2036 Predicted P-loop ATPas 86.4 0.83 1.8E-05 43.0 3.7 36 153-188 611-646 (1011)
123 TIGR03827 GNAT_ablB putative b 84.5 1.7 3.7E-05 36.2 4.6 49 171-222 20-68 (266)
124 PHA02769 hypothetical protein; 83.2 1.3 2.9E-05 31.8 2.8 45 173-219 93-140 (154)
125 COG2935 Putative arginyl-tRNA: 83.2 6.9 0.00015 32.2 7.3 61 135-201 159-219 (253)
126 KOG3014 Protein involved in es 80.6 9.1 0.0002 31.6 7.1 29 156-184 183-211 (257)
127 KOG2747 Histone acetyltransfer 80.3 3.4 7.3E-05 36.4 4.8 32 157-188 261-292 (396)
128 cd04266 DUF619-NAGS-FABP DUF61 77.4 19 0.00041 25.8 7.2 45 154-203 37-83 (108)
129 COG5630 ARG2 Acetylglutamate s 76.7 11 0.00024 33.0 6.8 48 137-186 383-431 (495)
130 COG2898 Uncharacterized conser 75.1 16 0.00035 33.8 7.8 61 130-195 396-456 (538)
131 PF09924 DUF2156: Uncharacteri 74.0 53 0.0011 27.7 10.5 65 124-195 179-244 (299)
132 COG5027 SAS2 Histone acetyltra 73.0 2.9 6.3E-05 36.1 2.4 55 125-184 234-290 (395)
133 PRK02983 lysS lysyl-tRNA synth 72.9 21 0.00045 36.2 8.7 59 133-197 427-485 (1094)
134 PF04816 DUF633: Family of unk 68.0 12 0.00027 30.0 5.0 51 172-222 74-126 (205)
135 PF12261 T_hemolysin: Thermost 67.8 17 0.00036 28.6 5.5 53 157-216 88-140 (179)
136 PRK04531 acetylglutamate kinas 66.1 57 0.0012 29.1 9.2 61 156-222 310-372 (398)
137 PF08901 DUF1847: Protein of u 59.6 15 0.00032 28.1 3.7 42 177-218 42-87 (157)
138 PF02474 NodA: Nodulation prot 58.0 28 0.0006 27.2 4.9 53 156-212 85-137 (196)
139 cd03173 DUF619-like DUF619 dom 56.6 67 0.0014 22.6 7.9 42 156-202 33-74 (98)
140 cd07235 MRD Mitomycin C resist 55.0 14 0.00031 26.0 3.0 18 200-217 10-27 (122)
141 COG5092 NMT1 N-myristoyl trans 52.1 1.6E+02 0.0034 25.5 9.9 87 135-224 319-420 (451)
142 cd08353 Glo_EDI_BRP_like_7 Thi 51.9 14 0.0003 27.0 2.5 28 190-218 4-31 (142)
143 COG2384 Predicted SAM-dependen 49.0 44 0.00095 27.3 5.0 48 172-219 93-142 (226)
144 PF04339 DUF482: Protein of un 46.4 78 0.0017 28.0 6.6 71 161-233 105-177 (370)
145 cd09012 Glo_EDI_BRP_like_24 Th 42.9 20 0.00044 25.4 2.2 17 201-217 11-27 (124)
146 cd08356 Glo_EDI_BRP_like_17 Th 42.4 21 0.00047 25.0 2.2 17 202-218 13-29 (113)
147 COG3473 Maleate cis-trans isom 42.3 47 0.001 26.9 4.2 34 185-218 113-149 (238)
148 PF13380 CoA_binding_2: CoA bi 40.2 81 0.0017 22.6 4.9 42 177-218 67-108 (116)
149 COG2994 HlyC ACP:hemolysin acy 39.3 89 0.0019 23.5 4.9 19 128-146 54-72 (148)
150 cd08358 Glo_EDI_BRP_like_21 Th 38.8 69 0.0015 23.5 4.5 18 201-218 13-31 (127)
151 PF02388 FemAB: FemAB family; 38.5 95 0.0021 27.7 6.1 83 128-214 37-136 (406)
152 cd08350 BLMT_like BLMT, a bleo 37.7 31 0.00066 24.3 2.4 18 201-218 13-30 (120)
153 PF12953 DUF3842: Domain of un 37.4 54 0.0012 24.3 3.6 45 167-215 6-50 (131)
154 TIGR02990 ectoine_eutA ectoine 36.4 51 0.0011 27.2 3.7 43 176-218 106-151 (239)
155 PTZ00129 40S ribosomal protein 35.2 1.9E+02 0.004 22.1 6.2 44 174-217 74-128 (149)
156 PF04339 DUF482: Protein of un 33.2 3.5E+02 0.0075 24.0 13.3 89 127-230 253-341 (370)
157 cd07267 THT_Oxygenase_N N-term 32.9 39 0.00084 23.5 2.3 26 191-217 5-30 (113)
158 PF10566 Glyco_hydro_97: Glyco 32.4 98 0.0021 26.1 4.8 56 161-217 48-124 (273)
159 PRK00756 acyltransferase NodA; 32.1 1.1E+02 0.0023 24.0 4.5 41 156-197 85-125 (196)
160 TIGR03628 arch_S11P archaeal r 31.8 2E+02 0.0043 20.8 6.4 44 174-217 48-102 (114)
161 cd08342 HPPD_N_like N-terminal 31.7 78 0.0017 22.9 3.8 27 192-219 3-30 (136)
162 cd08346 PcpA_N_like N-terminal 30.7 73 0.0016 22.0 3.5 27 191-218 3-30 (126)
163 PRK09607 rps11p 30S ribosomal 29.8 2.4E+02 0.0051 21.0 6.4 44 174-217 55-109 (132)
164 cd08344 MhqB_like_N N-terminal 29.5 49 0.0011 22.9 2.3 26 191-217 4-29 (112)
165 COG0807 RibA GTP cyclohydrolas 27.9 1.4E+02 0.003 23.8 4.7 49 162-219 120-168 (193)
166 COG1212 KdsB CMP-2-keto-3-deox 27.7 1.6E+02 0.0035 24.2 5.1 42 174-217 27-68 (247)
167 KOG2675 Adenylate cyclase-asso 27.4 95 0.0021 28.0 4.0 17 36-52 258-274 (480)
168 KOG1472 Histone acetyltransfer 26.5 15 0.00032 35.2 -1.1 98 111-216 405-503 (720)
169 PRK10150 beta-D-glucuronidase; 26.5 4.2E+02 0.0091 24.9 8.6 83 138-220 272-357 (604)
170 PF00925 GTP_cyclohydro2: GTP 25.8 1.1E+02 0.0024 23.6 3.9 45 166-219 123-167 (169)
171 COG2348 Peptidoglycan interpep 25.3 5.1E+02 0.011 23.4 8.4 53 167-219 78-145 (418)
172 KOG1412 Aspartate aminotransfe 25.2 1.1E+02 0.0023 26.7 3.8 58 169-230 107-164 (410)
173 PF04555 XhoI: Restriction end 25.0 2.1E+02 0.0045 22.8 5.1 38 161-198 144-181 (196)
174 PF00903 Glyoxalase: Glyoxalas 24.7 75 0.0016 21.9 2.6 29 191-220 3-32 (128)
175 PF12681 Glyoxalase_2: Glyoxal 24.5 75 0.0016 21.4 2.5 17 202-218 7-24 (108)
176 PF05063 MT-A70: MT-A70 ; Int 24.3 2.5E+02 0.0055 21.6 5.7 30 196-225 52-82 (176)
177 PF02836 Glyco_hydro_2_C: Glyc 23.9 2.6E+02 0.0057 23.4 6.2 65 157-221 15-81 (298)
178 KOG2675 Adenylate cyclase-asso 23.9 61 0.0013 29.1 2.2 18 37-54 256-273 (480)
179 PF04015 DUF362: Domain of unk 23.8 1.2E+02 0.0026 23.9 3.9 57 172-228 19-80 (206)
180 cd07253 Glo_EDI_BRP_like_2 Thi 23.8 1.1E+02 0.0024 20.9 3.4 29 189-218 3-32 (125)
181 cd07252 BphC1-RGP6_N_like N-te 23.7 80 0.0017 22.1 2.6 28 190-218 3-31 (120)
182 PRK10291 glyoxalase I; Provisi 23.3 83 0.0018 22.3 2.7 19 200-218 6-25 (129)
183 COG3607 Predicted lactoylgluta 23.1 53 0.0012 24.2 1.5 17 202-218 15-31 (133)
184 cd08352 Glo_EDI_BRP_like_1 Thi 22.7 1E+02 0.0023 21.1 3.0 28 189-217 3-31 (125)
185 cd07246 Glo_EDI_BRP_like_8 Thi 22.4 1.7E+02 0.0037 20.0 4.1 19 200-218 11-30 (122)
186 cd07265 2_3_CTD_N N-terminal d 21.7 96 0.0021 21.6 2.7 27 191-218 6-33 (122)
187 COG0623 FabI Enoyl-[acyl-carri 21.1 1.5E+02 0.0032 24.6 3.8 44 158-201 145-189 (259)
188 PRK11478 putative lyase; Provi 20.7 89 0.0019 21.9 2.4 27 190-217 7-34 (129)
189 KOG1201 Hydroxysteroid 17-beta 20.6 3.4E+02 0.0073 23.3 5.9 40 169-212 46-86 (300)
190 PLN03042 Lactoylglutathione ly 20.6 2E+02 0.0042 22.6 4.4 32 188-219 24-57 (185)
191 cd07241 Glo_EDI_BRP_like_3 Thi 20.5 1.3E+02 0.0027 20.8 3.1 25 192-217 4-29 (125)
192 PF11633 SUD-M: Single-strande 20.2 2.7E+02 0.0058 20.9 4.6 40 177-219 24-63 (142)
193 cd07238 Glo_EDI_BRP_like_5 Thi 20.0 96 0.0021 21.2 2.3 16 202-217 12-28 (112)
No 1
>KOG3216 consensus Diamine acetyltransferase [Amino acid transport and metabolism]
Probab=99.96 E-value=4e-28 Score=179.36 Aligned_cols=161 Identities=52% Similarity=0.820 Sum_probs=146.6
Q ss_pred eEEEecccCCCChhHHHHHHHHHHHhhccccccccchhhHHhhhcCCCCCcceeeeeeeccCCCCCCCCCCCCCCCCCCc
Q 026503 30 LFSRIRLATPADVPHIHKLIHQMAVFEKLTHLFSATESSLAATLFNSPPFTSFTVLLLEVSPSPFAPLHSPASSPSPYSP 109 (237)
Q Consensus 30 ~~~~ir~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~e~~~~~~~~~~~~~~~~~~~~~ 109 (237)
+.++||.++++|.+.+.+|+++++.+++..+.+..+.+.+..++|.++++.- +.++.+
T Consensus 2 ~~~~IR~at~~D~~~i~rLikela~Fek~~~~v~~te~~l~~~~F~d~~~~~--~~v~~i-------------------- 59 (163)
T KOG3216|consen 2 DNIRIRLATPKDCEDILRLIKELAEFEKLEDQVEATEENLARDGFIDPPFKH--WLVAAI-------------------- 59 (163)
T ss_pred CceEEEecCcccHHHHHHHHHHHHHHHHhccchhhchhhhhhhhccCCCccE--EEEEEE--------------------
Confidence 4689999999999999999999999999999999999999999999888632 222222
Q ss_pred cchhhhcccCCCCCCCcEEEEecCCCccEEEEEEEecCCcccCCCCceEEEEEEEccchhcCChHHHHHHHHHHHHHHhC
Q 026503 110 VDRIVYLDLPLDDPDRETFASDETHDVTVAGFVLFFPNYSTFLAKPGFYIEDIFVRECYRRKGFGRILLSAVAKQAVKMG 189 (237)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvG~~~~~~~~~~~~~~~~~~i~~~~V~p~~rg~Gig~~ll~~~~~~a~~~g 189 (237)
+.+++.++|++.++..+++|.++..+||.+++|.|.|||+|+|+.|++.+.+.|.+.|
T Consensus 60 ----------------------e~~~~~~aGf~~yf~~ystW~~k~~iYleDlyV~e~yR~kG~Gs~Ll~~va~~A~~~G 117 (163)
T KOG3216|consen 60 ----------------------ETSGEVVAGFALYFNNYSTWLGKQGIYLEDLYVREQYRGKGIGSKLLKFVAEEADKLG 117 (163)
T ss_pred ----------------------ecCCCceeEEeeeecccccccccceEEEEeeEecchhcccChHHHHHHHHHHHHHHcC
Confidence 1125599999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEEEEecCCHHHHHHHHHCCCEEeceEEEEeecchHHhhhhc
Q 026503 190 YGRVEWIVLDWNVNAIKFYEEMGAKVLSEWRICRLTGDALDAYGN 234 (237)
Q Consensus 190 ~~~i~~~v~~~n~~a~~~y~k~GF~~~~~~~~~~~~~~~~~~~~~ 234 (237)
+.++.+.|..+|.+|+.||+|.|++..++|+.|+++|..+-+++.
T Consensus 118 ~~rv~w~vldwN~rAi~lY~k~gaq~l~~W~l~r~~G~al~~~a~ 162 (163)
T KOG3216|consen 118 TPRVEWVVLDWNHRAILLYEKVGAQDLKEWRLFRRTGEALLKLAD 162 (163)
T ss_pred CCcEEEEEeccchhHHHHHHHhCccccceeEEEEechHHHHHhhc
Confidence 999999999999999999999999999999999999999998864
No 2
>PRK10146 aminoalkylphosphonic acid N-acetyltransferase; Provisional
Probab=99.79 E-value=9.3e-19 Score=132.76 Aligned_cols=95 Identities=18% Similarity=0.100 Sum_probs=77.5
Q ss_pred CCCCcEEEEecCCCccEEEEEEEecCCcccCCCCceEEEEEEEccchhcCChHHHHHHHHHHHHHHhCCcEEEEEEecCC
Q 026503 122 DPDRETFASDETHDVTVAGFVLFFPNYSTFLAKPGFYIEDIFVRECYRRKGFGRILLSAVAKQAVKMGYGRVEWIVLDWN 201 (237)
Q Consensus 122 ~~~~~~~~~~~~~~~~vvG~~~~~~~~~~~~~~~~~~i~~~~V~p~~rg~Gig~~ll~~~~~~a~~~g~~~i~~~v~~~n 201 (237)
++...++++..++ ++||++.+.............+|..++|+|+|||+|||+.|++.+++.|++.|+..+.+.+...|
T Consensus 44 ~~~~~~~v~~~~~--~ivG~~~~~~~~~~~~~~~~~~i~~l~v~p~~rg~GiG~~Ll~~~~~~a~~~~~~~i~l~~~~~n 121 (144)
T PRK10146 44 DPNMRYHLALLDG--EVVGMIGLHLQFHLHHVNWIGEIQELVVMPQARGLNVGSKLLAWAEEEARQAGAEMTELSTNVKR 121 (144)
T ss_pred CCCceEEEEEECC--EEEEEEEEEecccccccchhheeheeEECHHHcCCCHHHHHHHHHHHHHHHcCCcEEEEecCCCc
Confidence 3444566666644 99999998654322222224578899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHCCCEEece
Q 026503 202 VNAIKFYEEMGAKVLSE 218 (237)
Q Consensus 202 ~~a~~~y~k~GF~~~~~ 218 (237)
..+++||+|+||+..+.
T Consensus 122 ~~a~~fY~~~Gf~~~~~ 138 (144)
T PRK10146 122 HDAHRFYLREGYEQSHF 138 (144)
T ss_pred hHHHHHHHHcCCchhhh
Confidence 99999999999987653
No 3
>PF13420 Acetyltransf_4: Acetyltransferase (GNAT) domain; PDB: 3DR8_A 3DR6_A 2AE6_B 2JLM_C 2J8R_A 1YVO_B 2J8M_A 2J8N_A 2BL1_A 3IWG_A ....
Probab=99.75 E-value=2.2e-17 Score=126.76 Aligned_cols=104 Identities=26% Similarity=0.366 Sum_probs=82.9
Q ss_pred CCcEEEEecCCCccEEEEEEEecCCcccCCCCceEEEEEEEccchhcCChHHHHHHHHHHHH-HHhCCcEEEEEEecCCH
Q 026503 124 DRETFASDETHDVTVAGFVLFFPNYSTFLAKPGFYIEDIFVRECYRRKGFGRILLSAVAKQA-VKMGYGRVEWIVLDWNV 202 (237)
Q Consensus 124 ~~~~~~~~~~~~~~vvG~~~~~~~~~~~~~~~~~~i~~~~V~p~~rg~Gig~~ll~~~~~~a-~~~g~~~i~~~v~~~n~ 202 (237)
....|++.. .+|++||++.+..... ....+.+ .++|.+++|++|+|+.|+..++++| ++.|++++.+.|...|.
T Consensus 49 ~~~~~~v~~-~~g~iiG~~~~~~~~~---~~~~~~~-~~~v~~~~~~~gig~~l~~~l~~~af~~~~~~~i~~~v~~~N~ 123 (155)
T PF13420_consen 49 KQRLFLVAE-EDGKIIGYVSLRDIDP---YNHTAEL-SIYVSPDYRGKGIGRKLLDELIEYAFKELGIHKIYLEVFSSNE 123 (155)
T ss_dssp TTEEEEEEE-CTTEEEEEEEEEESSS---GTTEEEE-EEEEEGGGTTSSHHHHHHHHHHHHH-HHTT-CEEEEEEETT-H
T ss_pred CCcEEEEEE-cCCcEEEEEEEEeeec---cCCEEEE-eeEEChhHCCCcHHHHHHHHHHHHhhhccCeEEEEEEEecCCH
Confidence 344555554 3559999999975433 2333444 5888899999999999999999999 88899999999999999
Q ss_pred HHHHHHHHCCCEEeceE-EEEeecchHHhhh
Q 026503 203 NAIKFYEEMGAKVLSEW-RICRLTGDALDAY 232 (237)
Q Consensus 203 ~a~~~y~k~GF~~~~~~-~~~~~~~~~~~~~ 232 (237)
.+++||+|+||+.++.. ..+.++|+..|..
T Consensus 124 ~~i~~~~~~GF~~~g~~~~~~~~~~~y~D~~ 154 (155)
T PF13420_consen 124 KAINFYKKLGFEEEGELKDHIFINGKYYDVV 154 (155)
T ss_dssp HHHHHHHHTTEEEEEEEEEEEEETTEEEEEE
T ss_pred HHHHHHHhCCCEEEEEEecEEEECCeEEEeE
Confidence 99999999999999998 5777788776653
No 4
>PRK10140 putative acetyltransferase YhhY; Provisional
Probab=99.74 E-value=6.4e-17 Score=124.87 Aligned_cols=104 Identities=18% Similarity=0.186 Sum_probs=79.7
Q ss_pred cEEEEecCCCccEEEEEEEecCCcccCCCCceEEEEEEEccchhcCChHHHHHHHHHHHHHH-hCCcEEEEEEecCCHHH
Q 026503 126 ETFASDETHDVTVAGFVLFFPNYSTFLAKPGFYIEDIFVRECYRRKGFGRILLSAVAKQAVK-MGYGRVEWIVLDWNVNA 204 (237)
Q Consensus 126 ~~~~~~~~~~~~vvG~~~~~~~~~~~~~~~~~~i~~~~V~p~~rg~Gig~~ll~~~~~~a~~-~g~~~i~~~v~~~n~~a 204 (237)
..+++.++ +++||++.+....... ...... ..++|+|+|||+|||+.|++.+++++++ .|+..+.+.|...|.++
T Consensus 52 ~~~v~~~~--~~~vG~~~~~~~~~~~-~~~~~~-~~~~v~p~~rg~Gig~~ll~~l~~~~~~~~~~~~i~l~v~~~N~~a 127 (162)
T PRK10140 52 KQLVACID--GDVVGHLTIDVQQRPR-RSHVAD-FGICVDSRWKNRGVASALMREMIEMCDNWLRVDRIELTVFVDNAPA 127 (162)
T ss_pred EEEEEEEC--CEEEEEEEEecccccc-cceEEE-EEEEECHHHcCCCHHHHHHHHHHHHHHhhCCccEEEEEEEcCCHHH
Confidence 45666554 4999999987532110 111223 3699999999999999999999999988 59999999999999999
Q ss_pred HHHHHHCCCEEeceEEEE-eecchHHhhhh
Q 026503 205 IKFYEEMGAKVLSEWRIC-RLTGDALDAYG 233 (237)
Q Consensus 205 ~~~y~k~GF~~~~~~~~~-~~~~~~~~~~~ 233 (237)
++||+|+||+..+....+ ..+|...|.+.
T Consensus 128 ~~~y~k~GF~~~g~~~~~~~~~~~~~d~~~ 157 (162)
T PRK10140 128 IKVYKKYGFEIEGTGKKYALRNGEYVDAYY 157 (162)
T ss_pred HHHHHHCCCEEEeecccceeeCCeEEEEEE
Confidence 999999999999987533 34566555443
No 5
>TIGR02382 wecD_rffC TDP-D-fucosamine acetyltransferase. This model represents the WecD protein (Formerly RffC) for the biosynthesis of enterobacterial common antigen (ECA), an outer leaflet, outer membrane glycolipid with a trisaccharide repeat unit. WecD is a member of the GNAT family of acetytransferases (pfam00583).
Probab=99.74 E-value=6.1e-17 Score=129.12 Aligned_cols=80 Identities=19% Similarity=0.159 Sum_probs=71.2
Q ss_pred CccEEEEEEEecCCcccCCCCceEEEEEEEccchhcCChHHHHHHHHHHHHHHhCCcEEEEEEecCCHHHHHHHHHCCCE
Q 026503 135 DVTVAGFVLFFPNYSTFLAKPGFYIEDIFVRECYRRKGFGRILLSAVAKQAVKMGYGRVEWIVLDWNVNAIKFYEEMGAK 214 (237)
Q Consensus 135 ~~~vvG~~~~~~~~~~~~~~~~~~i~~~~V~p~~rg~Gig~~ll~~~~~~a~~~g~~~i~~~v~~~n~~a~~~y~k~GF~ 214 (237)
++++||++.+..... ...++..++|+|+|||||+|+.|++.+++++++.|+..+.+.|...|.++++||+|+||+
T Consensus 107 ~g~iiG~i~l~~~~~-----~~~~i~~l~V~p~~rGkG~G~~ll~~~~~~a~~~g~~~I~l~v~~~N~~A~~~Y~klGF~ 181 (191)
T TIGR02382 107 SGDPRGYVTLRELND-----TDARIGLLAVFPGAQSRGIGAELMQTALNWCYARGLTRLRVATQMGNTAALRLYIRSGAN 181 (191)
T ss_pred CCeEEEEEEEEecCC-----CceEEEEEEECHHHcCCCHHHHHHHHHHHHHHHcCCCEEEEEeCCCCHHHHHHHHHcCCc
Confidence 459999999864321 236788999999999999999999999999999999999999999999999999999999
Q ss_pred EeceE
Q 026503 215 VLSEW 219 (237)
Q Consensus 215 ~~~~~ 219 (237)
.+++.
T Consensus 182 ~~~~~ 186 (191)
T TIGR02382 182 IESTA 186 (191)
T ss_pred cccce
Confidence 98875
No 6
>PRK03624 putative acetyltransferase; Provisional
Probab=99.73 E-value=8.5e-17 Score=120.68 Aligned_cols=88 Identities=19% Similarity=0.221 Sum_probs=74.0
Q ss_pred CCcEEEEecCCCccEEEEEEEecCCcccCCCCceEEEEEEEccchhcCChHHHHHHHHHHHHHHhCCcEEEEEEecCCHH
Q 026503 124 DRETFASDETHDVTVAGFVLFFPNYSTFLAKPGFYIEDIFVRECYRRKGFGRILLSAVAKQAVKMGYGRVEWIVLDWNVN 203 (237)
Q Consensus 124 ~~~~~~~~~~~~~~vvG~~~~~~~~~~~~~~~~~~i~~~~V~p~~rg~Gig~~ll~~~~~~a~~~g~~~i~~~v~~~n~~ 203 (237)
...++++..+ +++||++.+.... ....+..++|+|+|||+|+|+.|+..+++++++.|+..+.+.+...|..
T Consensus 44 ~~~~~v~~~~--~~~vG~~~~~~~~------~~~~i~~i~v~p~~rg~Gig~~ll~~~~~~~~~~~~~~~~~~~~~~N~~ 115 (140)
T PRK03624 44 PSLFLVAEVG--GEVVGTVMGGYDG------HRGWAYYLAVHPDFRGRGIGRALVARLEKKLIARGCPKINLQVREDNDA 115 (140)
T ss_pred CceEEEEEcC--CcEEEEEEeeccC------CCceEEEEEECHHHhCCCHHHHHHHHHHHHHHHCCCCEEEEEEecCcHH
Confidence 3445666654 4999999875322 1246778999999999999999999999999999999999999999999
Q ss_pred HHHHHHHCCCEEeceE
Q 026503 204 AIKFYEEMGAKVLSEW 219 (237)
Q Consensus 204 a~~~y~k~GF~~~~~~ 219 (237)
++++|+|+||+..+..
T Consensus 116 ~~~~y~k~GF~~~~~~ 131 (140)
T PRK03624 116 VLGFYEALGYEEQDRI 131 (140)
T ss_pred HHHHHHHcCCccccEE
Confidence 9999999999987654
No 7
>COG1247 Sortase and related acyltransferases [Cell envelope biogenesis, outer membrane]
Probab=99.71 E-value=1.5e-16 Score=122.56 Aligned_cols=157 Identities=21% Similarity=0.144 Sum_probs=115.2
Q ss_pred EEecccCCCChhHHHHHHHHHHHhhccc-cccccchhhHHhhhcCCCCCcceeeeeeeccCCCCCCCCCCCCCCCCCCcc
Q 026503 32 SRIRLATPADVPHIHKLIHQMAVFEKLT-HLFSATESSLAATLFNSPPFTSFTVLLLEVSPSPFAPLHSPASSPSPYSPV 110 (237)
Q Consensus 32 ~~ir~~~~~D~~~l~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~e~~~~~~~~~~~~~~~~~~~~~~ 110 (237)
|.||+++.+|++.|.++++......... +..+.+.+.+..++-..
T Consensus 2 ~~ir~~~~~Dl~~I~~IY~~~v~~~~a~~e~~~~~~~~~~~~~~~~---------------------------------- 47 (169)
T COG1247 2 MEIRPATAADLEAILEIYNGAVENTAATFEEDPVSLEERAAWFSGR---------------------------------- 47 (169)
T ss_pred cEEecChHHhHHHHHHHHHHhhhcceEEEeccCCCHHHHHHHHHhc----------------------------------
Confidence 6799999999999999998876544332 22233344433322111
Q ss_pred chhhhcccCCCCCCCcEEEEecCCCccEEEEEEEecCCcccCCCCceEEEEEEEccchhcCChHHHHHHHHHHHHHHhCC
Q 026503 111 DRIVYLDLPLDDPDRETFASDETHDVTVAGFVLFFPNYSTFLAKPGFYIEDIFVRECYRRKGFGRILLSAVAKQAVKMGY 190 (237)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~vvG~~~~~~~~~~~~~~~~~~i~~~~V~p~~rg~Gig~~ll~~~~~~a~~~g~ 190 (237)
. ..+..++++..+ +|+++|++.+.+-.+ +..-+...-..++|+|++||+|||++|++.+++.+..+|+
T Consensus 48 ---------~-~~g~p~~V~~~~-~g~v~G~a~~~~fr~-r~ay~~tve~SiYv~~~~~g~GiG~~Ll~~Li~~~~~~g~ 115 (169)
T COG1247 48 ---------T-RDGYPVVVAEEE-DGKVLGYASAGPFRE-RPAYRHTVELSIYLDPAARGKGLGKKLLQALITEARALGV 115 (169)
T ss_pred ---------c-cCCceEEEEEcC-CCeEEEEEEeeeccC-ccccceEEEEEEEECcccccccHHHHHHHHHHHHHHhCCe
Confidence 1 111234555432 469999999976443 3444456777999999999999999999999999999999
Q ss_pred cEEEEEEecCCHHHHHHHHHCCCEEeceEEEE-eecchHHhhhhc
Q 026503 191 GRVEWIVLDWNVNAIKFYEEMGAKVLSEWRIC-RLTGDALDAYGN 234 (237)
Q Consensus 191 ~~i~~~v~~~n~~a~~~y~k~GF~~~~~~~~~-~~~~~~~~~~~~ 234 (237)
+.++..|...|.++++|++++||+.++.+... .+.|.++|-...
T Consensus 116 ~~lva~I~~~n~aSi~lh~~~GF~~~G~~~~vg~k~g~wld~~~~ 160 (169)
T COG1247 116 RELVAGIESDNLASIALHEKLGFEEVGTFPEVGDKFGRWLDLVLM 160 (169)
T ss_pred EEEEEEEcCCCcHhHHHHHHCCCEEeccccccccccceEEeeeee
Confidence 99999999999999999999999999987433 556666665443
No 8
>PTZ00330 acetyltransferase; Provisional
Probab=99.71 E-value=4.8e-16 Score=118.18 Aligned_cols=82 Identities=24% Similarity=0.311 Sum_probs=67.3
Q ss_pred CccEEEEEEEecCCccc-CCCCceEEEEEEEccchhcCChHHHHHHHHHHHHHHhCCcEEEEEEecCCHHHHHHHHHCCC
Q 026503 135 DVTVAGFVLFFPNYSTF-LAKPGFYIEDIFVRECYRRKGFGRILLSAVAKQAVKMGYGRVEWIVLDWNVNAIKFYEEMGA 213 (237)
Q Consensus 135 ~~~vvG~~~~~~~~~~~-~~~~~~~i~~~~V~p~~rg~Gig~~ll~~~~~~a~~~g~~~i~~~v~~~n~~a~~~y~k~GF 213 (237)
+|++||++.+....... .+...++|..++|+|+|||+|||+.|++.+++++++.|+..+.+. .|..+++||+|+||
T Consensus 60 ~~~~vG~~~~~~~~~~~~~~~~~~~i~~~~V~~~~rg~Gig~~l~~~~~~~a~~~~~~~l~l~---~n~~a~~~y~k~GF 136 (147)
T PTZ00330 60 TQRIVGTASLFVEPKFTRGGKCVGHIEDVVVDPSYRGQGLGRALISDLCEIARSSGCYKVILD---CTEDMVAFYKKLGF 136 (147)
T ss_pred CCEEEEEEEEEeccccccCCCceEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEe---cChHHHHHHHHCCC
Confidence 45999999986443221 222356899999999999999999999999999999998888554 48899999999999
Q ss_pred EEeceE
Q 026503 214 KVLSEW 219 (237)
Q Consensus 214 ~~~~~~ 219 (237)
+.....
T Consensus 137 ~~~~~~ 142 (147)
T PTZ00330 137 RACERQ 142 (147)
T ss_pred EEeceE
Confidence 988754
No 9
>PRK10975 TDP-fucosamine acetyltransferase; Provisional
Probab=99.69 E-value=1.4e-15 Score=121.50 Aligned_cols=80 Identities=21% Similarity=0.200 Sum_probs=71.2
Q ss_pred CccEEEEEEEecCCcccCCCCceEEEEEEEccchhcCChHHHHHHHHHHHHHHhCCcEEEEEEecCCHHHHHHHHHCCCE
Q 026503 135 DVTVAGFVLFFPNYSTFLAKPGFYIEDIFVRECYRRKGFGRILLSAVAKQAVKMGYGRVEWIVLDWNVNAIKFYEEMGAK 214 (237)
Q Consensus 135 ~~~vvG~~~~~~~~~~~~~~~~~~i~~~~V~p~~rg~Gig~~ll~~~~~~a~~~g~~~i~~~v~~~n~~a~~~y~k~GF~ 214 (237)
++++||++.+..... ...+|..++|.|+|||+|+|+.|+..++++++++|+..+.+.|...|.++++||+|+||+
T Consensus 110 ~g~~vG~~~l~~~~~-----~~~~i~~~~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~~yek~Gf~ 184 (194)
T PRK10975 110 SGQIQGFVTLRELND-----TDARIGLLAVFPGAQGRGIGARLMQAALNWCQARGLTRLRVATQMGNLAALRLYIRSGAN 184 (194)
T ss_pred CCCEEEEEEEEecCC-----CceEEEEEEEChhhcCCCHHHHHHHHHHHHHHHcCCCEEEEEeCCCcHHHHHHHHHCCCe
Confidence 459999998864321 246788899999999999999999999999999999999999999999999999999999
Q ss_pred EeceE
Q 026503 215 VLSEW 219 (237)
Q Consensus 215 ~~~~~ 219 (237)
.++..
T Consensus 185 ~~~~~ 189 (194)
T PRK10975 185 IESTA 189 (194)
T ss_pred EeEEE
Confidence 98875
No 10
>KOG3139 consensus N-acetyltransferase [General function prediction only]
Probab=99.69 E-value=9.3e-16 Score=115.13 Aligned_cols=100 Identities=21% Similarity=0.221 Sum_probs=85.4
Q ss_pred CcEEEEecCCCccEEEEEEEecCCcccCCCCceEEEEEEEccchhcCChHHHHHHHHHHHHHHhCCcEEEEEEecCCHHH
Q 026503 125 RETFASDETHDVTVAGFVLFFPNYSTFLAKPGFYIEDIFVRECYRRKGFGRILLSAVAKQAVKMGYGRVEWIVLDWNVNA 204 (237)
Q Consensus 125 ~~~~~~~~~~~~~vvG~~~~~~~~~~~~~~~~~~i~~~~V~p~~rg~Gig~~ll~~~~~~a~~~g~~~i~~~v~~~n~~a 204 (237)
..+|++.+++ +..||.+.+...... +...++|..++|+++|||+|||++|++.+++.++.+|+..+++++...|.+|
T Consensus 56 ~~~~~a~d~~-~~~VGai~ck~~~~r--~~~rgyi~mLaV~~e~Rg~GIg~aLvr~aId~m~~~g~~eVvLeTe~~n~~A 132 (165)
T KOG3139|consen 56 CFCFLALDEK-GDTVGAIVCKLDTHR--NTLRGYIAMLAVDSEYRGQGIGKALVRKAIDAMRSRGYSEVVLETEVTNLSA 132 (165)
T ss_pred eEEEEEEcCC-CceEEEEEEeccccC--CcceEEEEEEEechhhccccHHHHHHHHHHHHHHHCCCcEEEEeccccchHH
Confidence 3455555443 237999988654332 2446899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHCCCEEeceEEEEeecch
Q 026503 205 IKFYEEMGAKVLSEWRICRLTGD 227 (237)
Q Consensus 205 ~~~y~k~GF~~~~~~~~~~~~~~ 227 (237)
+++|+++||+..+....|.++|.
T Consensus 133 ~~LY~sLGF~r~~r~~~YYlng~ 155 (165)
T KOG3139|consen 133 LRLYESLGFKRDKRLFRYYLNGM 155 (165)
T ss_pred HHHHHhcCceEecceeEEEECCc
Confidence 99999999999999988888886
No 11
>PF13523 Acetyltransf_8: Acetyltransferase (GNAT) domain; PDB: 2VQY_A 2BUE_A 1V0C_A 1YK3_D 2PR8_A 2QIR_A 2PRB_A 2QML_A 2PC1_A.
Probab=99.69 E-value=9.6e-16 Score=117.50 Aligned_cols=98 Identities=20% Similarity=0.377 Sum_probs=77.9
Q ss_pred CCCCcEEEEecCCCccEEEEEEEecCCccc-CCCCceEEEEEEEccchhcCChHHHHHHHHHHHHHHh-CCcEEEEEEec
Q 026503 122 DPDRETFASDETHDVTVAGFVLFFPNYSTF-LAKPGFYIEDIFVRECYRRKGFGRILLSAVAKQAVKM-GYGRVEWIVLD 199 (237)
Q Consensus 122 ~~~~~~~~~~~~~~~~vvG~~~~~~~~~~~-~~~~~~~i~~~~V~p~~rg~Gig~~ll~~~~~~a~~~-g~~~i~~~v~~ 199 (237)
++....+++..++ +++|++.+....... .......++.++|.+++||+|+|+.+++.+++++.+. ++..+.+.+..
T Consensus 45 ~~~~~~~v~~~dg--~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rg~G~g~~~~~~~~~~~~~~~~~~~i~~~~~~ 122 (152)
T PF13523_consen 45 DPGHHPYVAEDDG--EPIGYFEIYWPDEDYDADDGDRGIHRLIVDPEYRGQGLGKAMLRALIEFLFEDPGVDRIVLDPHE 122 (152)
T ss_dssp TTTEEEEEEEETT--EEEEEEEEEEGGGSS---TTEEEEEEEESTGGGTTSSHHHHHHHHHHHHHHTSTT--EEEEEEBT
T ss_pred cCCceEEEEEECC--EEEEEEEEecccccccCCCCEEEEeeeeechhhcCCCHHHHHHHHHHHHHHhCCCCCEEEEecCc
Confidence 4556677777755 999999986422221 1334577889999999999999999999999999987 89999999999
Q ss_pred CCHHHHHHHHHCCCEEeceEEE
Q 026503 200 WNVNAIKFYEEMGAKVLSEWRI 221 (237)
Q Consensus 200 ~n~~a~~~y~k~GF~~~~~~~~ 221 (237)
.|.+++++|+|+||+.++++..
T Consensus 123 ~N~~~~~~~~k~GF~~~g~~~~ 144 (152)
T PF13523_consen 123 DNTRAIRLYEKAGFRKVGEFEF 144 (152)
T ss_dssp T-HHHHHHHHHTT-EEEEEEEE
T ss_pred CCHHHHHHHHHcCCEEeeEEEC
Confidence 9999999999999999998864
No 12
>TIGR03827 GNAT_ablB putative beta-lysine N-acetyltransferase. Members of this protein family are GNAT family acetyltransferases, based on a seed alignment in which every member is associated with a lysine 2,3-aminomutase family protein, usually as the adjacent gene. This family includes AblB, the enzyme beta-lysine acetyltransferase that completes the two-step synthesis of the osmolyte (compatible solute) N-epsilon-acetyl-beta-lysine; all members of the family may have this function. Note that N-epsilon-acetyl-beta-lysine has been observed only in methanogenic archaea (e.g. Methanosarcina) but that this model, paired with TIGR03820, suggests a much broader distribution.
Probab=99.68 E-value=7.9e-16 Score=128.89 Aligned_cols=102 Identities=15% Similarity=0.110 Sum_probs=84.9
Q ss_pred CcEEEEecCCCccEEEEEEEecCCcccCCCCceEEEEEEEccchhcCChHHHHHHHHHHHHHHhCCcEEEEEEecCCHHH
Q 026503 125 RETFASDETHDVTVAGFVLFFPNYSTFLAKPGFYIEDIFVRECYRRKGFGRILLSAVAKQAVKMGYGRVEWIVLDWNVNA 204 (237)
Q Consensus 125 ~~~~~~~~~~~~~vvG~~~~~~~~~~~~~~~~~~i~~~~V~p~~rg~Gig~~ll~~~~~~a~~~g~~~i~~~v~~~n~~a 204 (237)
..++++..+ +++||++.+.... ....++|..++|+|+|||+|||+.|++.++++++++|+..+.+.+...|.++
T Consensus 158 ~~~~v~~~~--g~iVG~~~~~~~~----~~~~~eI~~i~V~P~yRG~GiG~~Ll~~l~~~a~~~g~~~l~~~~~~~n~~a 231 (266)
T TIGR03827 158 VVYFGVEDG--GKIIALASAEMDP----ENGNAEMTDFATLPEYRGKGLAKILLAAMEKEMKEKGIRTAYTIARASSYGM 231 (266)
T ss_pred cEEEEEEEC--CEEEEEEEEecCC----CCCcEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCcEEEeehhhcchhH
Confidence 345666654 4999999874322 1235789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHCCCEEeceE-EEEeecchHHhhh
Q 026503 205 IKFYEEMGAKVLSEW-RICRLTGDALDAY 232 (237)
Q Consensus 205 ~~~y~k~GF~~~~~~-~~~~~~~~~~~~~ 232 (237)
+++|+|+||+..+.. ..+.++|+..|..
T Consensus 232 ~~ly~k~GF~~~G~l~n~~~i~G~~~d~~ 260 (266)
T TIGR03827 232 NITFARLGYAYGGTLVNNTNISGGFESMN 260 (266)
T ss_pred HHHHHHcCCccccEEeecceecCCcccce
Confidence 999999999999987 4666777776653
No 13
>PF00583 Acetyltransf_1: Acetyltransferase (GNAT) family; InterPro: IPR000182 The N-acetyltransferases (NAT) (EC 2.3.1.-) are enzymes that use acetyl coenzyme A (CoA) to transfer an acetyl group to a substrate, a reaction implicated in various functions from bacterial antibiotic resistance to mammalian circadian rhythm and chromatin remodeling. The Gcn5-related N-acetyltransferases (GNAT) catalyze the transfer of the acetyl from the CoA donor to a primary amine of the acceptor. The GNAT proteins share a domain composed of four conserved sequence motifs A-D [, ]. This GNAT domain is named after yeast GCN5 (from General Control Nonrepressed) and related histone acetyltransferases (HATs) like Hat1 and PCAF. HATs acetylate lysine residues of amino terminal histone tails, resulting in transcription activation. Another category of GNAT, the aminoglycoside N-acetyltransferases, confer antibiotic resistance by catalyzing the acetylation of amino groups in aminoglycoside antibiotics []. GNAT proteins can also have anabolic and catabolic functions in both prokaryotes and eukaryotes [, , , , ]. The acetyltransferase/GNAT domain forms a structurally conserved fold of 6 to 7 beta strands (B) and 4 helices (H) in the topology B1-H1-H2-B2-B3-B4-H3-B5-H4-B6, followed by a C-terminal strand which may be from the same monomer or contributed by another [, ]. Motifs D (B2-B3), A (B4-H3) and B (B5-H4) are collectively called the HAT core [, , ], while the N-terminal motif C (B1-H1) is less conserved. Some proteins known to contain a GNAT domain: Yeast GCN5 and Hat1, which are histone acetyltransferases (EC 2.3.1.48). Human PCAF, a histone acetyltransferase. Mammalian serotonin N-acetyltransferase (SNAT) or arylalkylamine NAT (AANAT), which acetylates serotonin into a circadian neurohormone that may participate in light-dark rhythms, and human mood and behavior. Mammalian glucosamine 6-phosphate N-acetyltransferase (GNA1) (EC 2.3.1.4). Escherichia coli rimI and rimJ, which acetylate the N-terminal alanine of ribosomal proteins S18 and S5, respectively (EC 2.3.1.128). Mycobacterium tuberculosis aminoglycoside 2'-N-acetyltransferase (aac), which acetylates the 2' hydroxyl or amino group of a broad spectrum of aminoglycoside antibiotics. Bacillus subtilis bltD and paiA, which acetylate spermine and spermidine. This entry represents the entire GNAT domain.; GO: 0008080 N-acetyltransferase activity, 0008152 metabolic process; PDB: 3T9Y_A 2R7H_B 2OZH_A 1Y9W_B 1VKC_B 2OH1_C 3R9E_B 3R9G_B 3R9F_A 3R96_A ....
Probab=99.67 E-value=9.4e-16 Score=105.18 Aligned_cols=80 Identities=33% Similarity=0.403 Sum_probs=72.9
Q ss_pred CccEEEEEEEecCCcccCCCCceEEEEEEEccchhcCChHHHHHHHHHHHHHHhCCcEEEEEEecCCHHHHHHHHHCCCE
Q 026503 135 DVTVAGFVLFFPNYSTFLAKPGFYIEDIFVRECYRRKGFGRILLSAVAKQAVKMGYGRVEWIVLDWNVNAIKFYEEMGAK 214 (237)
Q Consensus 135 ~~~vvG~~~~~~~~~~~~~~~~~~i~~~~V~p~~rg~Gig~~ll~~~~~~a~~~g~~~i~~~v~~~n~~a~~~y~k~GF~ 214 (237)
+|++||++.+............++|..++|+|+|||+|||+.|++.+++.+++.|+..+.+.+...|..+++||+|+||+
T Consensus 4 ~~~ivg~~~~~~~~~~~~~~~~~~i~~~~v~~~~r~~Gig~~L~~~~~~~~~~~g~~~i~~~~~~~n~~~~~~~~k~Gf~ 83 (83)
T PF00583_consen 4 DGQIVGFASLRPPPEPFDHGNHAYIHRLAVDPEYRGQGIGSKLLQAAEEWARKRGIKRIYLDVSPDNPAARRFYEKLGFE 83 (83)
T ss_dssp TTEEEEEEEEEEEETTTTTTTEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHTTESEEEEEEETTGHHHHHHHHHTTEE
T ss_pred CCEEEEEEEEEECCCccccCCEEEEEEEEEcHHHhhCCCchhhhhhhhhhHHhcCccEEEEEEeCCCHHHHHHHHHcCCC
Confidence 45999999998766543335679999999999999999999999999999999999999999999999999999999996
No 14
>TIGR02406 ectoine_EctA L-2,4-diaminobutyric acid acetyltransferase. This enzyme family is the EctA of ectoine biosynthesis. Ectoine is a compatible solute, analagous to trehalose, betaines, etc., found often in halotolerant organisms. EctA is L-2,4-diaminobutyric acid acetyltransferase, also called DABA acetyltransferase.
Probab=99.67 E-value=1.8e-15 Score=116.92 Aligned_cols=101 Identities=14% Similarity=0.166 Sum_probs=79.9
Q ss_pred EEEEecCCCccEEEEEEEecCCcccCCCCceEEEEEEEccchhcCChHHHHHHHHHHHHHHhCCcEEEEEEecCCHHHHH
Q 026503 127 TFASDETHDVTVAGFVLFFPNYSTFLAKPGFYIEDIFVRECYRRKGFGRILLSAVAKQAVKMGYGRVEWIVLDWNVNAIK 206 (237)
Q Consensus 127 ~~~~~~~~~~~vvG~~~~~~~~~~~~~~~~~~i~~~~V~p~~rg~Gig~~ll~~~~~~a~~~g~~~i~~~v~~~n~~a~~ 206 (237)
.+++.+ .++++||++.+..... .....++..++|+|+|||+|||+.|++.++++++..+...+.+.|...|.++++
T Consensus 41 ~~v~~~-~~~~ivG~~~~~~~~~---~~~~~~i~~l~V~p~~rg~GiG~~L~~~l~~~a~~~~~~~i~~~v~~~N~~a~~ 116 (157)
T TIGR02406 41 SIVAES-EGGEIVGFVSGYLRPD---RPDVLFVWQVAVDPRARGKGLARRLLEALLERVACERVRHLETTITPDNQASRA 116 (157)
T ss_pred EEEEEc-CCCeEEEEEEEEecCC---CCCeEEEEEEEEChHhccCcHHHHHHHHHHHHHHhCCCCEEEEEEcCCCHHHHH
Confidence 445442 2459999987653322 233578889999999999999999999999999999999999999999999999
Q ss_pred HHHHCCCEEeceE-EEEeecchHHhh
Q 026503 207 FYEEMGAKVLSEW-RICRLTGDALDA 231 (237)
Q Consensus 207 ~y~k~GF~~~~~~-~~~~~~~~~~~~ 231 (237)
||+|+||+....+ ..-.++++.++-
T Consensus 117 ly~k~G~~~~~~~~~~~~~~~~~~~~ 142 (157)
T TIGR02406 117 LFKALARRRGVHLIEEPFFDGELFPG 142 (157)
T ss_pred HHHHhCcccCCCeEeecccccccCcc
Confidence 9999999987765 333446665543
No 15
>PLN02706 glucosamine 6-phosphate N-acetyltransferase
Probab=99.66 E-value=1.9e-15 Score=115.51 Aligned_cols=89 Identities=20% Similarity=0.170 Sum_probs=70.3
Q ss_pred EEEEecCCCccEEEEEEEecCCcc-cCCCCceEEEEEEEccchhcCChHHHHHHHHHHHHHHhCCcEEEEEEecCCHHHH
Q 026503 127 TFASDETHDVTVAGFVLFFPNYST-FLAKPGFYIEDIFVRECYRRKGFGRILLSAVAKQAVKMGYGRVEWIVLDWNVNAI 205 (237)
Q Consensus 127 ~~~~~~~~~~~vvG~~~~~~~~~~-~~~~~~~~i~~~~V~p~~rg~Gig~~ll~~~~~~a~~~g~~~i~~~v~~~n~~a~ 205 (237)
.+++.+++++++||++.+...... .......+|..++|+|+|||+|||+.|++.++++|++.|+..+.+.|...|.
T Consensus 55 ~~~~~~~~~~~ivG~~~~~~~~~~~~~~~~~~~i~~i~V~~~~rg~GiG~~ll~~~~~~a~~~g~~~i~l~~~~~N~--- 131 (150)
T PLN02706 55 ICVIEDAASGRIIATGSVFVERKFIRNCGKVGHIEDVVVDSAARGKGLGKKIIEALTEHARSAGCYKVILDCSEENK--- 131 (150)
T ss_pred EEEEEeCCCCcEEEEEEEEEEeecccCCCcEEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHcCCCEEEEEeccccH---
Confidence 455554334699999987532211 1112345688899999999999999999999999999999999999999995
Q ss_pred HHHHHCCCEEece
Q 026503 206 KFYEEMGAKVLSE 218 (237)
Q Consensus 206 ~~y~k~GF~~~~~ 218 (237)
+||+|+||+..+.
T Consensus 132 ~~y~k~GF~~~g~ 144 (150)
T PLN02706 132 AFYEKCGYVRKEI 144 (150)
T ss_pred HHHHHCcCEEehh
Confidence 5999999999874
No 16
>PRK15130 spermidine N1-acetyltransferase; Provisional
Probab=99.66 E-value=2.5e-15 Score=119.03 Aligned_cols=105 Identities=18% Similarity=0.199 Sum_probs=81.9
Q ss_pred CCCCcEEEEecCCCccEEEEEEEecCCcccCCCCceEEEEEEEccchhcCChHHHHHHHHHHHHHH-hCCcEEEEEEecC
Q 026503 122 DPDRETFASDETHDVTVAGFVLFFPNYSTFLAKPGFYIEDIFVRECYRRKGFGRILLSAVAKQAVK-MGYGRVEWIVLDW 200 (237)
Q Consensus 122 ~~~~~~~~~~~~~~~~vvG~~~~~~~~~~~~~~~~~~i~~~~V~p~~rg~Gig~~ll~~~~~~a~~-~g~~~i~~~v~~~ 200 (237)
++....|++..+ +++||++.+..... ......+ .++|.|+|||+|+|+.+++.+++++.+ .|...+++.|...
T Consensus 54 ~~~~~~~~i~~~--g~~iG~~~~~~~~~---~~~~~~~-~~~v~~~~~g~G~g~~l~~~l~~~~~~~~~~~rv~~~v~~~ 127 (186)
T PRK15130 54 DQSERRFVVECD--GEKAGLVELVEINH---VHRRAEF-QIIISPEYQGKGLATRAAKLAMDYGFTVLNLYKLYLIVDKE 127 (186)
T ss_pred cccCcEEEEEEC--CEEEEEEEEEeecC---CCCeEEE-EEEECHHHcCCCHHHHHHHHHHHHHhhcCCceEEEEEEccC
Confidence 344456777654 49999998864321 1122344 699999999999999999999999876 5999999999999
Q ss_pred CHHHHHHHHHCCCEEeceEE-EEeecchHHhhh
Q 026503 201 NVNAIKFYEEMGAKVLSEWR-ICRLTGDALDAY 232 (237)
Q Consensus 201 n~~a~~~y~k~GF~~~~~~~-~~~~~~~~~~~~ 232 (237)
|.+++++|+|+||+.++... .+..+|+..|.+
T Consensus 128 N~~s~~~yek~GF~~~~~~~~~~~~~g~~~d~~ 160 (186)
T PRK15130 128 NEKAIHIYRKLGFEVEGELIHEFFINGEYRNTI 160 (186)
T ss_pred CHHHHHHHHHCCCEEEEEEeheEEECCEEEEEE
Confidence 99999999999999998763 455567665543
No 17
>TIGR03103 trio_acet_GNAT GNAT-family acetyltransferase TIGR03103. Members of this protein family belong to the GNAT family of acetyltransferases. Each is part of a conserved three-gene cassette sparsely distributed across at least twenty different species known so far, including alpha, beta, and gamma Proteobacteria, Mycobacterium, and Prosthecochloris, which is a member of the Chlorobi. The other two members of the cassette are a probable protease and an asparagine synthetase family protein.
Probab=99.66 E-value=2.6e-15 Score=137.11 Aligned_cols=102 Identities=19% Similarity=0.247 Sum_probs=81.9
Q ss_pred CCcEEEEecCCCccEEEEEEEecCCccc-CCCCceEEEEEEEccchhcCChHHHHHHHHHHHHHHhCCcEEEEEEecCCH
Q 026503 124 DRETFASDETHDVTVAGFVLFFPNYSTF-LAKPGFYIEDIFVRECYRRKGFGRILLSAVAKQAVKMGYGRVEWIVLDWNV 202 (237)
Q Consensus 124 ~~~~~~~~~~~~~~vvG~~~~~~~~~~~-~~~~~~~i~~~~V~p~~rg~Gig~~ll~~~~~~a~~~g~~~i~~~v~~~n~ 202 (237)
...++++.++.+|++||++.+......+ ......++..++|+|+|||+|||+.|++.+++++++.|+..+.+.|...|.
T Consensus 122 ~~~~~vA~~~~~g~IVG~~~~~~~~~~~~d~~~~~~i~~l~V~P~~Rg~GIG~~Ll~~l~e~a~~~G~~~i~L~V~~~N~ 201 (547)
T TIGR03103 122 AITYLVAEDEASGAIIGTVMGVDHRKAFNDPEHGSSLWCLAVDPQAAHPGVGEALVRALAEHFQSRGCAYMDLSVMHDNE 201 (547)
T ss_pred CceEEEEEECCCCeEEEEEEEEeccccccCCCCCeEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEEEcCCCH
Confidence 3446666654456999999764322111 123346788999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHCCCEEeceEEEEeec
Q 026503 203 NAIKFYEEMGAKVLSEWRICRLT 225 (237)
Q Consensus 203 ~a~~~y~k~GF~~~~~~~~~~~~ 225 (237)
.+++||+|+||+.+..+...+.+
T Consensus 202 ~Ai~fY~klGf~~~~~y~~~d~~ 224 (547)
T TIGR03103 202 QAIALYEKLGFRRIPVFALKRKN 224 (547)
T ss_pred HHHHHHHHCCCEEeeEEEEeccC
Confidence 99999999999999887765443
No 18
>PRK09491 rimI ribosomal-protein-alanine N-acetyltransferase; Provisional
Probab=99.65 E-value=4.2e-15 Score=113.17 Aligned_cols=83 Identities=25% Similarity=0.287 Sum_probs=72.3
Q ss_pred CccEEEEEEEecCCcccCCCCceEEEEEEEccchhcCChHHHHHHHHHHHHHHhCCcEEEEEEecCCHHHHHHHHHCCCE
Q 026503 135 DVTVAGFVLFFPNYSTFLAKPGFYIEDIFVRECYRRKGFGRILLSAVAKQAVKMGYGRVEWIVLDWNVNAIKFYEEMGAK 214 (237)
Q Consensus 135 ~~~vvG~~~~~~~~~~~~~~~~~~i~~~~V~p~~rg~Gig~~ll~~~~~~a~~~g~~~i~~~v~~~n~~a~~~y~k~GF~ 214 (237)
++++||++.+..... ...+..++|+|+|||+|+|+.+++.+++.+++.|+..+.+.+...|.++.++|+|+||+
T Consensus 48 ~~~~vG~~~~~~~~~------~~~~~~i~v~~~~rg~G~g~~ll~~~~~~~~~~~~~~~~~~~~~~N~~a~~~y~k~Gf~ 121 (146)
T PRK09491 48 NGQMAAFAITQVVLD------EATLFNIAVDPDYQRQGLGRALLEHLIDELEKRGVATLWLEVRASNAAAIALYESLGFN 121 (146)
T ss_pred CCeEEEEEEEEeecC------ceEEEEEEECHHHccCCHHHHHHHHHHHHHHHCCCcEEEEEEccCCHHHHHHHHHcCCE
Confidence 459999998864322 25677899999999999999999999999988899999999999999999999999999
Q ss_pred EeceEEEEe
Q 026503 215 VLSEWRICR 223 (237)
Q Consensus 215 ~~~~~~~~~ 223 (237)
..+....+.
T Consensus 122 ~~~~~~~~~ 130 (146)
T PRK09491 122 EVTIRRNYY 130 (146)
T ss_pred Eeeeeeccc
Confidence 988776554
No 19
>PHA00673 acetyltransferase domain containing protein
Probab=99.65 E-value=2.3e-15 Score=114.39 Aligned_cols=100 Identities=16% Similarity=0.059 Sum_probs=83.4
Q ss_pred cccCCCCCCCcEEEEecCCCccEEEEEEEecCCcc-cCCCCceEEEEEEEccchhcCChHHHHHHHHHHHHHHhCCcEEE
Q 026503 116 LDLPLDDPDRETFASDETHDVTVAGFVLFFPNYST-FLAKPGFYIEDIFVRECYRRKGFGRILLSAVAKQAVKMGYGRVE 194 (237)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~vvG~~~~~~~~~~-~~~~~~~~i~~~~V~p~~rg~Gig~~ll~~~~~~a~~~g~~~i~ 194 (237)
+.+...++...++++.+++ ++||++.+...+.. ..+...+.|..++|+|++||+|||+.|+++++++|+++|+..++
T Consensus 46 f~ai~~dp~~~llVa~~~g--~vVG~~~l~~~p~l~~~~~~~~~Ie~l~V~~~~RGqGIG~~Ll~~A~~~Ar~~Gc~~ly 123 (154)
T PHA00673 46 YAGMEAAGVAHFLGVFRGE--ELVGFACLLVTPVPHFKGQLIGTTESIFVAAAHRPGGAGMALLRATEALARDLGATGLY 123 (154)
T ss_pred HHHHHhCCCcEEEEEEECC--EEEEEEEEEEecCCccCCccEEEEEEEEEChhccCCCHHHHHHHHHHHHHHHCCCCEEE
Confidence 5667778888999998744 99999998765533 34556789999999999999999999999999999999999998
Q ss_pred EEEecCCHHHHHHHHHCCCEEece
Q 026503 195 WIVLDWNVNAIKFYEEMGAKVLSE 218 (237)
Q Consensus 195 ~~v~~~n~~a~~~y~k~GF~~~~~ 218 (237)
+..... ...+.||.++|++.+..
T Consensus 124 is~~p~-~~tv~fy~~~g~~~~~~ 146 (154)
T PHA00673 124 VSGPTE-GRLVQLLPAAGYRETNR 146 (154)
T ss_pred EecCCC-ccchHHHHhCCchhhch
Confidence 864443 35789999999998764
No 20
>PRK10809 ribosomal-protein-S5-alanine N-acetyltransferase; Provisional
Probab=99.63 E-value=4.6e-15 Score=118.35 Aligned_cols=107 Identities=12% Similarity=0.035 Sum_probs=80.6
Q ss_pred CCCCcEEEEecCCCccEEEEEEEecCCcccCCCCceEEEEEEEccchhcCChHHHHHHHHHHHHHHh-CCcEEEEEEecC
Q 026503 122 DPDRETFASDETHDVTVAGFVLFFPNYSTFLAKPGFYIEDIFVRECYRRKGFGRILLSAVAKQAVKM-GYGRVEWIVLDW 200 (237)
Q Consensus 122 ~~~~~~~~~~~~~~~~vvG~~~~~~~~~~~~~~~~~~i~~~~V~p~~rg~Gig~~ll~~~~~~a~~~-g~~~i~~~v~~~ 200 (237)
++....|++....++++||.+.+..... ......+ ..++|.|+|||+|+|+.+++.+++++.+. |++.+.+.|...
T Consensus 72 ~~~~~~~~i~~~~~~~~iG~i~l~~~~~--~~~~~~e-ig~~i~~~~~G~G~~~ea~~~ll~~~~~~l~l~~i~~~v~~~ 148 (194)
T PRK10809 72 QGSAFYFALLDPDEKEIIGVANFSNVVR--GSFHACY-LGYSLGQKWQGQGLMFEALQAAIRYMQRQQHMHRIMANYMPH 148 (194)
T ss_pred cCcEEEEEEEECCCCeEEEEEEEEeecC--CCeeeEE-EEEEECHHHcCCCHHHHHHHHHHHHHHhcCCceEEEEEeeCC
Confidence 3444455654444569999999864321 1112233 47889999999999999999999999885 999999999999
Q ss_pred CHHHHHHHHHCCCEEeceEEE-EeecchHHhh
Q 026503 201 NVNAIKFYEEMGAKVLSEWRI-CRLTGDALDA 231 (237)
Q Consensus 201 n~~a~~~y~k~GF~~~~~~~~-~~~~~~~~~~ 231 (237)
|.+|+++|+|+||+..+.... +..+|+..|.
T Consensus 149 N~~S~~l~ek~Gf~~~g~~~~~~~~~g~~~d~ 180 (194)
T PRK10809 149 NKRSGDLLARLGFEKEGYAKDYLLIDGQWRDH 180 (194)
T ss_pred CHHHHHHHHHCCCcEEeeeccccccCCeEEEE
Confidence 999999999999999887643 3335554443
No 21
>TIGR01575 rimI ribosomal-protein-alanine acetyltransferase. Members of this model belong to the GCN5-related N-acetyltransferase (GNAT) superfamily. This model covers prokarotes and the archaea. The seed contains a characterized accession for Gram negative E. coli. An untraceable characterized accession (PIR|S66013) for Gram positive B. subtilis scores well (205.0) in the full alignment. Characterized members are lacking in the archaea. Noise cutoff (72.4) was set to exclude M. loti paralog of rimI. Trusted cutoff (80.0) was set at next highest scoring member in the mini-database.
Probab=99.59 E-value=1.6e-14 Score=107.05 Aligned_cols=102 Identities=20% Similarity=0.170 Sum_probs=82.2
Q ss_pred cccCCCCCCCcEEEEecCCCccEEEEEEEecCCcccCCCCceEEEEEEEccchhcCChHHHHHHHHHHHHHHhCCcEEEE
Q 026503 116 LDLPLDDPDRETFASDETHDVTVAGFVLFFPNYSTFLAKPGFYIEDIFVRECYRRKGFGRILLSAVAKQAVKMGYGRVEW 195 (237)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~vvG~~~~~~~~~~~~~~~~~~i~~~~V~p~~rg~Gig~~ll~~~~~~a~~~g~~~i~~ 195 (237)
++..+......++++.++ +++||++.+..... ..++..++|+|+|||+|+|+.|++.+++++.+.|+..+.+
T Consensus 22 ~~~~~~~~~~~~~~~~~~--~~~vg~~~~~~~~~------~~~i~~~~v~~~~rg~G~g~~ll~~~~~~~~~~~~~~i~~ 93 (131)
T TIGR01575 22 FAEELANYHLCYLLARIG--GKVVGYAGVQIVLD------EAHILNIAVKPEYQGQGIGRALLRELIDEAKGRGVNEIFL 93 (131)
T ss_pred HHHHhcCCCceEEEEecC--CeEEEEEEEEecCC------CeEEEEEEECHHHcCCCHHHHHHHHHHHHHHHcCCCeEEE
Confidence 333333444445555554 49999999764332 3578899999999999999999999999999999999999
Q ss_pred EEecCCHHHHHHHHHCCCEEeceEEEEeec
Q 026503 196 IVLDWNVNAIKFYEEMGAKVLSEWRICRLT 225 (237)
Q Consensus 196 ~v~~~n~~a~~~y~k~GF~~~~~~~~~~~~ 225 (237)
.+...|..+++||+|+||+.++....+.-.
T Consensus 94 ~~~~~n~~~~~~y~~~Gf~~~~~~~~~~~~ 123 (131)
T TIGR01575 94 EVRVSNIAAQALYKKLGFNEIAIRRNYYPD 123 (131)
T ss_pred EEecccHHHHHHHHHcCCCccccccccccC
Confidence 999999999999999999999987655433
No 22
>TIGR03585 PseH pseudaminic acid biosynthesis N-acetyl transferase. Sequences in this family are members of the pfam00583 (GNAT) superfamily of acetyltransferases and are proposed to perform a N-acetylation step in the process of pseudaminic acid biosynthesis in Campylobacter species. This gene is commonly observed in apparent operons with other genes responsible for the biosynthesis of pseudaminic acid and as a component of flagellar and exopolysaccharide biosynthesis loci. Significantly, many genomes containing other components of this pathway lack this gene, indicating that some other N-acetyl transferases may be incolved and/or the step is optional, resulting in a non-acetylated pseudaminic acid variant sugar.
Probab=99.59 E-value=2.1e-14 Score=110.16 Aligned_cols=107 Identities=21% Similarity=0.338 Sum_probs=81.5
Q ss_pred CCCCCCCcEEEEecCCCccEEEEEEEecCCcccCCCCceEEEEEEEccchhcCChHHHHHHHHHHHHHH-hCCcEEEEEE
Q 026503 119 PLDDPDRETFASDETHDVTVAGFVLFFPNYSTFLAKPGFYIEDIFVRECYRRKGFGRILLSAVAKQAVK-MGYGRVEWIV 197 (237)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~vvG~~~~~~~~~~~~~~~~~~i~~~~V~p~~rg~Gig~~ll~~~~~~a~~-~g~~~i~~~v 197 (237)
...++....+++..+ |++||++.+..... ......+ .+++.|.+| +|||+.++..+++++.+ .|+..+.+.|
T Consensus 45 ~~~~~~~~~~~~~~~--g~~vG~~~~~~~~~---~~~~~~~-g~~~~~~~~-~G~g~~~~~~~~~~a~~~~~~~~i~~~v 117 (156)
T TIGR03585 45 LKQDPNRRYWIVCQE--SRPIGVISFTDINL---VHKSAFW-GIYANPFCK-PGVGSVLEEAALEYAFEHLGLHKLSLEV 117 (156)
T ss_pred hhcCCCceEEEEEEC--CEEEEEEEEEecCh---hhCeEEE-EEEeChhhh-cCchHHHHHHHHHHHHhhCCeeEEEEEE
Confidence 333444456666654 49999999975432 1223445 355899999 99999999999999986 4999999999
Q ss_pred ecCCHHHHHHHHHCCCEEeceEE-EEeecchHHhhh
Q 026503 198 LDWNVNAIKFYEEMGAKVLSEWR-ICRLTGDALDAY 232 (237)
Q Consensus 198 ~~~n~~a~~~y~k~GF~~~~~~~-~~~~~~~~~~~~ 232 (237)
...|.++++||+|+||+.++... .+..+|+..|.+
T Consensus 118 ~~~N~~s~~~y~k~Gf~~~g~~~~~~~~~g~~~d~~ 153 (156)
T TIGR03585 118 LEFNNKALKLYEKFGFEREGVFRQGIFKEGEYYDVL 153 (156)
T ss_pred eccCHHHHHHHHHcCCeEeeeehhheeECCeEEEEE
Confidence 99999999999999999999874 444567665543
No 23
>PRK07922 N-acetylglutamate synthase; Validated
Probab=99.58 E-value=5.2e-14 Score=110.09 Aligned_cols=81 Identities=17% Similarity=0.261 Sum_probs=65.7
Q ss_pred EEEEe-cCCCccEEEEEEEecCCcccCCCCceEEEEEEEccchhcCChHHHHHHHHHHHHHHhCCcEEEEEEecCCHHHH
Q 026503 127 TFASD-ETHDVTVAGFVLFFPNYSTFLAKPGFYIEDIFVRECYRRKGFGRILLSAVAKQAVKMGYGRVEWIVLDWNVNAI 205 (237)
Q Consensus 127 ~~~~~-~~~~~~vvG~~~~~~~~~~~~~~~~~~i~~~~V~p~~rg~Gig~~ll~~~~~~a~~~g~~~i~~~v~~~n~~a~ 205 (237)
++++. . ++++||++.+..... ....|..++|+|+|||+|||++|++.+++++++.|+..+.+.+. +.
T Consensus 47 ~~va~~~--~~~iiG~~~~~~~~~-----~~~~i~~l~V~p~~rgkGiG~~Ll~~~~~~a~~~g~~~l~~~~~-----~~ 114 (169)
T PRK07922 47 FWVAEHL--DGEVVGCGALHVMWE-----DLAEIRTVAVDPAARGRGVGHAIVERLLDVARELGLSRVFVLTF-----EV 114 (169)
T ss_pred EEEEEec--CCcEEEEEEEeecCC-----CceEEEEEEECHHHhCCCHHHHHHHHHHHHHHHcCCCEEEEEec-----cH
Confidence 45555 5 449999998764321 24678899999999999999999999999999999999977654 26
Q ss_pred HHHHHCCCEEeceE
Q 026503 206 KFYEEMGAKVLSEW 219 (237)
Q Consensus 206 ~~y~k~GF~~~~~~ 219 (237)
+||+|+||+.++..
T Consensus 115 ~fY~k~GF~~~~~~ 128 (169)
T PRK07922 115 EFFARHGFVEIDGT 128 (169)
T ss_pred HHHHHCCCEECccc
Confidence 79999999998653
No 24
>PRK09831 putative acyltransferase; Provisional
Probab=99.57 E-value=2.4e-14 Score=109.24 Aligned_cols=89 Identities=21% Similarity=0.359 Sum_probs=69.2
Q ss_pred cEEEEecCCCccEEEEEEEecCCcccCCCCceEEEEEEEccchhcCChHHHHHHHHHHHHHHhCCcEEEEEEecCCHHHH
Q 026503 126 ETFASDETHDVTVAGFVLFFPNYSTFLAKPGFYIEDIFVRECYRRKGFGRILLSAVAKQAVKMGYGRVEWIVLDWNVNAI 205 (237)
Q Consensus 126 ~~~~~~~~~~~~vvG~~~~~~~~~~~~~~~~~~i~~~~V~p~~rg~Gig~~ll~~~~~~a~~~g~~~i~~~v~~~n~~a~ 205 (237)
.++++..+ |++||++.+.. .++..++|+|+|||+|||+.|++.+++.++. + .+.. |..++
T Consensus 54 ~~~v~~~~--~~iiG~~~~~~----------~~i~~~~v~p~~~g~GiG~~Ll~~~~~~~~~-----l--~v~~-~~~a~ 113 (147)
T PRK09831 54 QVRVAVIN--AQPVGFITCIE----------HYIDMLFVDPEYTRRGVASALLKPLIKSESE-----L--TVDA-SITAK 113 (147)
T ss_pred ceEEEEEC--CEEEEEEEehh----------ceeeeEEECHHHcCCCHHHHHHHHHHHHhhh-----e--Eeec-chhhH
Confidence 45666654 49999998742 3577899999999999999999999998764 2 3333 57899
Q ss_pred HHHHHCCCEEeceEEEEeecchHHhhhhcc
Q 026503 206 KFYEEMGAKVLSEWRICRLTGDALDAYGNA 235 (237)
Q Consensus 206 ~~y~k~GF~~~~~~~~~~~~~~~~~~~~~~ 235 (237)
+||+|+||+.+++.. ...+|..++.+.+.
T Consensus 114 ~~Y~k~Gf~~~g~~~-~~~~g~~~~~~~m~ 142 (147)
T PRK09831 114 PFFERYGFQTVKQQR-VECRGEWFINFYMR 142 (147)
T ss_pred HHHHHCCCEEeeccc-eEECCEEEEeeEEE
Confidence 999999999999876 45567777665543
No 25
>PRK10151 ribosomal-protein-L7/L12-serine acetyltransferase; Provisional
Probab=99.57 E-value=1.1e-13 Score=108.91 Aligned_cols=99 Identities=15% Similarity=0.048 Sum_probs=78.0
Q ss_pred EEEEecCCCccEEEEEEEecCCcccCCCCceEEEEEEEccchhcCChHHHHHHHHHHHHHHh-CCcEEEEEEecCCHHHH
Q 026503 127 TFASDETHDVTVAGFVLFFPNYSTFLAKPGFYIEDIFVRECYRRKGFGRILLSAVAKQAVKM-GYGRVEWIVLDWNVNAI 205 (237)
Q Consensus 127 ~~~~~~~~~~~vvG~~~~~~~~~~~~~~~~~~i~~~~V~p~~rg~Gig~~ll~~~~~~a~~~-g~~~i~~~v~~~n~~a~ 205 (237)
.|++..+ +++||++.+...... ...+.+ .+++.|+|||+|+|+.++..+++++.+. |++++.+.|...|.+|+
T Consensus 69 ~~~i~~~--~~~iG~~~l~~~~~~---~~~~~i-g~~i~~~~~g~G~~tea~~~l~~~~~~~~~~~ri~~~v~~~N~~S~ 142 (179)
T PRK10151 69 MFMIFKE--DELIGVLSFNRIEPL---NKTAYI-GYWLDESHQGQGIISQALQALIHHYAQSGELRRFVIKCRVDNPASN 142 (179)
T ss_pred EEEEEEC--CEEEEEEEEEeeccC---CCceEE-EEEEChhhcCCcHHHHHHHHHHHHHHhhCCccEEEEEEcCCCHHHH
Confidence 4555554 499999988643211 123555 5689999999999999999999999875 89999999999999999
Q ss_pred HHHHHCCCEEeceEE-EEeecchHHhh
Q 026503 206 KFYEEMGAKVLSEWR-ICRLTGDALDA 231 (237)
Q Consensus 206 ~~y~k~GF~~~~~~~-~~~~~~~~~~~ 231 (237)
++|+|+||+..+..+ ....+|+..|.
T Consensus 143 ~v~ek~Gf~~~g~~~~~~~~~g~~~D~ 169 (179)
T PRK10151 143 QVALRNGFTLEGCLKQAEYLNGAYDDV 169 (179)
T ss_pred HHHHHCCCEEEeEeccceEECCEEEEE
Confidence 999999999999874 44446665554
No 26
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=99.56 E-value=1.1e-13 Score=118.95 Aligned_cols=132 Identities=17% Similarity=0.255 Sum_probs=96.8
Q ss_pred cceEEEecccCCCChhHHHHHHHHHHHhhccccccccchhhHHhhhcCCCCCcceeeeeeeccCCCCCCCCCCCCCCCCC
Q 026503 28 HPLFSRIRLATPADVPHIHKLIHQMAVFEKLTHLFSATESSLAATLFNSPPFTSFTVLLLEVSPSPFAPLHSPASSPSPY 107 (237)
Q Consensus 28 ~~~~~~ir~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~e~~~~~~~~~~~~~~~~~~~ 107 (237)
-.|.++||+++++|++.+.+|.+....+... ....+.+.+..
T Consensus 183 l~m~~~Ir~a~~~Dl~ri~~L~~~tnqfn~~--~~~~s~~~i~~------------------------------------ 224 (320)
T TIGR01686 183 LELSLNISKNDEQNVQRVEELLGRTNQFNAT--YTRLNQEDVAQ------------------------------------ 224 (320)
T ss_pred CCCEEEEEECChhhhHHHHHHHHhHHhhhcc--CccCCHHHHHH------------------------------------
Confidence 3478999999999999999999765432111 11122222222
Q ss_pred CccchhhhcccCCCCCCCcEEEEe-cC--CCccEEEEEEEecCCcccCCCCceEEEEEEEccchhcCChHHHHHHHHHHH
Q 026503 108 SPVDRIVYLDLPLDDPDRETFASD-ET--HDVTVAGFVLFFPNYSTFLAKPGFYIEDIFVRECYRRKGFGRILLSAVAKQ 184 (237)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~vvG~~~~~~~~~~~~~~~~~~i~~~~V~p~~rg~Gig~~ll~~~~~~ 184 (237)
.+.++ .++++. .+ +++.+||++.+.... ..++|..++|+|.+||+|||+.|++++++.
T Consensus 225 -----------~l~~~--~~~~~~~~d~~gd~givG~~~~~~~~------~~~~I~~l~vs~r~~grGig~~Ll~~l~~~ 285 (320)
T TIGR01686 225 -----------HMQKE--EIVTVSMSDRFGDSGIIGIFVFEKKE------GNLFIDDLCMSCRALGRGVETRMLRWLFEQ 285 (320)
T ss_pred -----------HhcCC--CEEEEEEEecCCCCceEEEEEEEecC------CcEEEEEEEEcHhHhcCcHHHHHHHHHHHH
Confidence 22222 233222 11 355899999886432 257899999999999999999999999999
Q ss_pred HHHhCCcEEEEEEe--cCCHHHHHHHHHCCCEEe
Q 026503 185 AVKMGYGRVEWIVL--DWNVNAIKFYEEMGAKVL 216 (237)
Q Consensus 185 a~~~g~~~i~~~v~--~~n~~a~~~y~k~GF~~~ 216 (237)
+++.|+..+.+.+. ..|.++++||+|+||+..
T Consensus 286 a~~~G~~~i~l~v~~~~~N~~A~~fY~~~GF~~~ 319 (320)
T TIGR01686 286 ALDLGNHNARLYYRRTERNMPFLSFYEQIGFEDE 319 (320)
T ss_pred HHHcCCCeEEEEEeeCCCchHHHHHHHHcCCccC
Confidence 99999999999774 589999999999999854
No 27
>COG0456 RimI Acetyltransferases [General function prediction only]
Probab=99.56 E-value=7.3e-14 Score=109.31 Aligned_cols=91 Identities=25% Similarity=0.309 Sum_probs=76.3
Q ss_pred cEEEEEEEecCCcccCCCCceEEEEEEEccchhcCChHHHHHHHHHHHHHHhCC-cEEEEEEecCCHHHHHHHHHCCCEE
Q 026503 137 TVAGFVLFFPNYSTFLAKPGFYIEDIFVRECYRRKGFGRILLSAVAKQAVKMGY-GRVEWIVLDWNVNAIKFYEEMGAKV 215 (237)
Q Consensus 137 ~vvG~~~~~~~~~~~~~~~~~~i~~~~V~p~~rg~Gig~~ll~~~~~~a~~~g~-~~i~~~v~~~n~~a~~~y~k~GF~~ 215 (237)
+++|++...............+|..++|+|+|||+|||+.|++.+++.+.+.+. ..+.+.|..+|..|++||+|+||+.
T Consensus 72 ~~~G~~~~~~~~~~~~~~~~~~i~~iaV~p~~r~~Gig~~Ll~~~~~~~~~~~~~~~~~L~V~~~N~~Ai~lY~~~GF~~ 151 (177)
T COG0456 72 KVVGFLLVRVVDGRPSADHEGHIYNLAVDPEYRGRGIGRALLDEALERLRERGLADKIVLEVRESNEAAIGLYRKLGFEV 151 (177)
T ss_pred ceeEEEEEEEecCCccccCccEEEEEEEChHhhcCCHHHHHHHHHHHHHHhcCCCceEEEEEecCChHHHHHHHHcCCEE
Confidence 599999986322211002357899999999999999999999999999999986 8999999999999999999999999
Q ss_pred eceEEEEeecch
Q 026503 216 LSEWRICRLTGD 227 (237)
Q Consensus 216 ~~~~~~~~~~~~ 227 (237)
++....|..++.
T Consensus 152 ~~~~~~yy~~~~ 163 (177)
T COG0456 152 VKIRKNYYADGN 163 (177)
T ss_pred EeeehhhccCCc
Confidence 998876666654
No 28
>PRK10514 putative acetyltransferase; Provisional
Probab=99.55 E-value=9.5e-14 Score=105.37 Aligned_cols=81 Identities=26% Similarity=0.296 Sum_probs=64.4
Q ss_pred CccEEEEEEEecCCcccCCCCceEEEEEEEccchhcCChHHHHHHHHHHHHHHhCCcEEEEEEecCCHHHHHHHHHCCCE
Q 026503 135 DVTVAGFVLFFPNYSTFLAKPGFYIEDIFVRECYRRKGFGRILLSAVAKQAVKMGYGRVEWIVLDWNVNAIKFYEEMGAK 214 (237)
Q Consensus 135 ~~~vvG~~~~~~~~~~~~~~~~~~i~~~~V~p~~rg~Gig~~ll~~~~~~a~~~g~~~i~~~v~~~n~~a~~~y~k~GF~ 214 (237)
++++||++.+.. .++..++|+|+|||+|||+.|++.+++.+ ..+.+.+...|..+++||+|+||+
T Consensus 58 ~~~~iG~~~~~~----------~~~~~~~v~p~~rgkGig~~Ll~~~~~~~-----~~i~~~v~~~N~~a~~~yek~Gf~ 122 (145)
T PRK10514 58 RDQPVGFMLLSG----------GHMEALFVDPDVRGCGVGRMLVEHALSLH-----PELTTDVNEQNEQAVGFYKKMGFK 122 (145)
T ss_pred CCcEEEEEEEec----------CcEeEEEECHHhccCCHHHHHHHHHHHhc-----cccEEEeecCCHHHHHHHHHCCCE
Confidence 459999998742 23558999999999999999999998753 357788999999999999999999
Q ss_pred EeceEEEEeecchHHhh
Q 026503 215 VLSEWRICRLTGDALDA 231 (237)
Q Consensus 215 ~~~~~~~~~~~~~~~~~ 231 (237)
..+... .+..|..++.
T Consensus 123 ~~~~~~-~~~~~~~~~~ 138 (145)
T PRK10514 123 VTGRSE-VDDQGRPYPL 138 (145)
T ss_pred Eecccc-cCCCCCccce
Confidence 988754 2334555443
No 29
>PF13673 Acetyltransf_10: Acetyltransferase (GNAT) domain; PDB: 2FIW_A 1BOB_A 3FNC_B 3EXN_A.
Probab=99.55 E-value=1.5e-13 Score=100.21 Aligned_cols=83 Identities=31% Similarity=0.504 Sum_probs=65.3
Q ss_pred cccCCCCCCCcEEEEecCCCccEEEEEEEecCCcccCCCCceEEEEEEEccchhcCChHHHHHHHHHHHHHHhCCcEEEE
Q 026503 116 LDLPLDDPDRETFASDETHDVTVAGFVLFFPNYSTFLAKPGFYIEDIFVRECYRRKGFGRILLSAVAKQAVKMGYGRVEW 195 (237)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~vvG~~~~~~~~~~~~~~~~~~i~~~~V~p~~rg~Gig~~ll~~~~~~a~~~g~~~i~~ 195 (237)
+.+.+.++...+|++.+++ ++||++.+.. ...|..++|+|+|||+|||+.|++.+++.++. |+..+.+
T Consensus 35 ~~~~~~~~~~~~~v~~~~~--~ivG~~~~~~---------~~~i~~l~v~p~~r~~Gig~~Ll~~~~~~~~~-~~~~l~~ 102 (117)
T PF13673_consen 35 LEEYLEEGSHTIFVAEEGG--EIVGFAWLEP---------DGEISHLYVLPEYRGRGIGRALLDAAEKEAKD-GIRRLTV 102 (117)
T ss_dssp HHHHHCTCCCEEEEEEETT--EEEEEEEEET---------CEEEEEEEE-GGGTTSSHHHHHHHHHHHHHTT-TCEEEEE
T ss_pred HHHHHHhcCCEEEEEEECC--EEEEEEEEcC---------CCeEEEEEEChhhcCCcHHHHHHHHHHHHHHc-CCcEEEE
Confidence 3444555556688888755 9999999851 13488999999999999999999999999966 8887755
Q ss_pred EEecCCHHHHHHHHHCCC
Q 026503 196 IVLDWNVNAIKFYEEMGA 213 (237)
Q Consensus 196 ~v~~~n~~a~~~y~k~GF 213 (237)
. .|..+.+||+|+||
T Consensus 103 ~---~~~~a~~~y~~~GF 117 (117)
T PF13673_consen 103 E---ANERARRFYRKLGF 117 (117)
T ss_dssp E---C-HHHHHHHHHTT-
T ss_pred E---eCHHHHHHHHhCCC
Confidence 5 89999999999998
No 30
>PF13302 Acetyltransf_3: Acetyltransferase (GNAT) domain; PDB: 3TTH_C 3JUW_A 2ZXV_A 2Z0Z_A 2VI7_B 3EG7_F 1YRE_C 3IGR_B 3FBU_A 2FCK_A ....
Probab=99.55 E-value=4.7e-14 Score=106.29 Aligned_cols=86 Identities=22% Similarity=0.317 Sum_probs=69.2
Q ss_pred CcEEEEecCCCccEEEEEEEecCCcccCCCCceEEEEEEEccchhcCChHHHHHHHHHHHHH-HhCCcEEEEEEecCCHH
Q 026503 125 RETFASDETHDVTVAGFVLFFPNYSTFLAKPGFYIEDIFVRECYRRKGFGRILLSAVAKQAV-KMGYGRVEWIVLDWNVN 203 (237)
Q Consensus 125 ~~~~~~~~~~~~~vvG~~~~~~~~~~~~~~~~~~i~~~~V~p~~rg~Gig~~ll~~~~~~a~-~~g~~~i~~~v~~~n~~ 203 (237)
...|++.+++++++||++.+..... ....+.+ .++|.|+|||+|+|+.++..+++++. ..|+..+.+.|...|.+
T Consensus 56 ~~~~~i~~~~~~~~iG~i~~~~~~~---~~~~~ei-g~~i~~~~~g~G~~~~~~~~~~~~~~~~~~~~~i~a~~~~~N~~ 131 (142)
T PF13302_consen 56 YYYFAIEDKDDGEIIGFIGLYNIDK---NNNWAEI-GYWIGPDYRGKGYGTEALKLLLDWAFEELGLHRIIATVMADNEA 131 (142)
T ss_dssp EEEEEEEETTTTEEEEEEEEEEEET---TTTEEEE-EEEEEGGGTTSSHHHHHHHHHHHHHHHTSTSSEEEEEEETT-HH
T ss_pred ceEEEEEeccCCceEEEeeeeeccc---CCCcccc-ccchhHHHHhhhHHHHHHHHHHHHHHhcCCcEEEEEEECcCCHH
Confidence 4456676666678999999943211 2335666 58899999999999999999999995 56999999999999999
Q ss_pred HHHHHHHCCCE
Q 026503 204 AIKFYEEMGAK 214 (237)
Q Consensus 204 a~~~y~k~GF~ 214 (237)
|+++++|+||+
T Consensus 132 s~~~~~k~GF~ 142 (142)
T PF13302_consen 132 SRRLLEKLGFE 142 (142)
T ss_dssp HHHHHHHTT-E
T ss_pred HHHHHHHcCCC
Confidence 99999999996
No 31
>PRK07757 acetyltransferase; Provisional
Probab=99.53 E-value=3.2e-13 Score=103.40 Aligned_cols=81 Identities=23% Similarity=0.385 Sum_probs=65.5
Q ss_pred EEEEecCCCccEEEEEEEecCCcccCCCCceEEEEEEEccchhcCChHHHHHHHHHHHHHHhCCcEEEEEEecCCHHHHH
Q 026503 127 TFASDETHDVTVAGFVLFFPNYSTFLAKPGFYIEDIFVRECYRRKGFGRILLSAVAKQAVKMGYGRVEWIVLDWNVNAIK 206 (237)
Q Consensus 127 ~~~~~~~~~~~vvG~~~~~~~~~~~~~~~~~~i~~~~V~p~~rg~Gig~~ll~~~~~~a~~~g~~~i~~~v~~~n~~a~~ 206 (237)
++++..+ +++||++.+..... ...++..++|+|+|||+|+|+.|++.+++.+.+.|+..+.+.+. +.+
T Consensus 43 ~~i~~~~--~~lvG~~~l~~~~~-----~~~~i~~v~V~p~~rg~Glg~~Ll~~l~~~a~~~g~~~i~~~~~-----~~~ 110 (152)
T PRK07757 43 FYVAEEE--GEIVGCCALHILWE-----DLAEIRSLAVSEDYRGQGIGRMLVEACLEEARELGVKRVFALTY-----QPE 110 (152)
T ss_pred EEEEEEC--CEEEEEEEEEeccC-----CceEEEEEEECHHHcCCCHHHHHHHHHHHHHHhCCCCeEEEEeC-----cHH
Confidence 4555554 49999999865322 24678899999999999999999999999999889988865542 358
Q ss_pred HHHHCCCEEeceE
Q 026503 207 FYEEMGAKVLSEW 219 (237)
Q Consensus 207 ~y~k~GF~~~~~~ 219 (237)
||+|+||+.++..
T Consensus 111 ~Y~k~GF~~~~~~ 123 (152)
T PRK07757 111 FFEKLGFREVDKE 123 (152)
T ss_pred HHHHCCCEEcccc
Confidence 9999999998763
No 32
>TIGR03448 mycothiol_MshD mycothiol biosynthesis acetyltransferase. Members of this family are MshD, the acetyltransferase that catalyzes the final step of mycothiol biosynthesis in various members of the Actinomyctes, Mycothiol replaces glutathione in these species.
Probab=99.53 E-value=8e-13 Score=111.92 Aligned_cols=92 Identities=17% Similarity=0.060 Sum_probs=73.3
Q ss_pred EEEEecCCCccEEEEEEEecCCcccCCCCceEEEEEEEccchhcCChHHHHHHHHHHHHHHhCCcEEEEEEecCCHHHHH
Q 026503 127 TFASDETHDVTVAGFVLFFPNYSTFLAKPGFYIEDIFVRECYRRKGFGRILLSAVAKQAVKMGYGRVEWIVLDWNVNAIK 206 (237)
Q Consensus 127 ~~~~~~~~~~~vvG~~~~~~~~~~~~~~~~~~i~~~~V~p~~rg~Gig~~ll~~~~~~a~~~g~~~i~~~v~~~n~~a~~ 206 (237)
++++.++.++++||++.+..... .....++..++|+|+|||+|||+.|+..+++++++.|+..+.+.+...|..+++
T Consensus 200 ~~~a~~~~~~~~vG~~~~~~~~~---~~~~~~i~~~~V~p~~rg~GiG~~ll~~~~~~~~~~g~~~v~l~v~~~N~~a~~ 276 (292)
T TIGR03448 200 LFLAFDDAPGELLGFHWTKVHPD---EPALGEVYVVGVDPAAQGRGLGDALTLIGLHHLAARGLPAVMLYVEADNEAAVR 276 (292)
T ss_pred eEEEEECCCCcEEEEEEEEecCC---CCceeEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEEEeCCCHHHHH
Confidence 45555432459999976543221 111346667899999999999999999999999999999999999999999999
Q ss_pred HHHHCCCEEeceEEE
Q 026503 207 FYEEMGAKVLSEWRI 221 (237)
Q Consensus 207 ~y~k~GF~~~~~~~~ 221 (237)
||+|+||+..+....
T Consensus 277 ~y~k~GF~~~~~~~~ 291 (292)
T TIGR03448 277 TYEKLGFTVAEVDVA 291 (292)
T ss_pred HHHHcCCEEcccccc
Confidence 999999999876543
No 33
>PF13527 Acetyltransf_9: Acetyltransferase (GNAT) domain; PDB: 3SXN_C 2I00_D 1M4D_B 1M44_A 1M4G_B 1M4I_A 2OZG_A 2HV2_F 3N7Z_A 3RYO_B ....
Probab=99.51 E-value=1.3e-13 Score=102.33 Aligned_cols=84 Identities=24% Similarity=0.371 Sum_probs=63.9
Q ss_pred cEEEEecCCCccEEEEEEEecCCcccCCC--CceEEEEEEEccchhcCChHHHHHHHHHHHHHHhCCcEEEEEEecCCHH
Q 026503 126 ETFASDETHDVTVAGFVLFFPNYSTFLAK--PGFYIEDIFVRECYRRKGFGRILLSAVAKQAVKMGYGRVEWIVLDWNVN 203 (237)
Q Consensus 126 ~~~~~~~~~~~~vvG~~~~~~~~~~~~~~--~~~~i~~~~V~p~~rg~Gig~~ll~~~~~~a~~~g~~~i~~~v~~~n~~ 203 (237)
.++++.+++ ++||++.+.+..-...+. ...++..++|+|+|||+|+|++|++.+++.++++|+..+.+.. .+
T Consensus 42 ~~~~~~~~~--~ivg~~~~~~~~~~~~g~~~~~~~i~~v~v~p~~R~~Gl~~~L~~~~~~~~~~~g~~~~~l~~--~~-- 115 (127)
T PF13527_consen 42 RCVVAEDDG--KIVGHVGLIPRRLSVGGKKFKAAYIGDVAVDPEYRGRGLGRQLMRALLERARERGVPFIFLFP--SS-- 115 (127)
T ss_dssp EEEEEEETT--EEEEEEEEEEEEEEETTEEEEEEEEEEEEE-GGGTTSSHHHHHHHHHHHHHHHTT-SEEEEE---SS--
T ss_pred cEEEEEECC--EEEEEEEEEEEEEEECCEEEEEEEEEEEEECHHHcCCCHHHHHHHHHHHHHHhCCCCEEEEec--CC--
Confidence 456666644 999999997643222222 3578999999999999999999999999999999998876554 22
Q ss_pred HHHHHHHCCCEEe
Q 026503 204 AIKFYEEMGAKVL 216 (237)
Q Consensus 204 a~~~y~k~GF~~~ 216 (237)
..||+|+||+.+
T Consensus 116 -~~~Y~~~G~~~~ 127 (127)
T PF13527_consen 116 -PPFYRRFGFEYA 127 (127)
T ss_dssp -HHHHHHTTEEEE
T ss_pred -hhhhhcCCCEEC
Confidence 479999999864
No 34
>KOG3396 consensus Glucosamine-phosphate N-acetyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=99.51 E-value=2.4e-13 Score=99.06 Aligned_cols=136 Identities=19% Similarity=0.223 Sum_probs=102.6
Q ss_pred EEEecccCCCChhH-HHHHHHHHHHhhccccccccchhhHHhhhcCCCCCcceeeeeeeccCCCCCCCCCCCCCCCCCCc
Q 026503 31 FSRIRLATPADVPH-IHKLIHQMAVFEKLTHLFSATESSLAATLFNSPPFTSFTVLLLEVSPSPFAPLHSPASSPSPYSP 109 (237)
Q Consensus 31 ~~~ir~~~~~D~~~-l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~e~~~~~~~~~~~~~~~~~~~~~ 109 (237)
.+.||++..+|+.. +.++..++.. .-..+.+++...+
T Consensus 6 ~~~lR~L~~~D~~kGf~elL~qLT~------vG~vt~e~F~krf------------------------------------ 43 (150)
T KOG3396|consen 6 GFKLRPLEEDDYGKGFIELLKQLTS------VGVVTREQFEKRF------------------------------------ 43 (150)
T ss_pred ceEEeecccccccchHHHHHHHHhh------ccccCHHHHHHHH------------------------------------
Confidence 38999999999997 8888877743 1223444544432
Q ss_pred cchhhhcccCCCCCC-CcEEEEecCCCccEEEEEEEecCCcccCC-CCceEEEEEEEccchhcCChHHHHHHHHHHHHHH
Q 026503 110 VDRIVYLDLPLDDPD-RETFASDETHDVTVAGFVLFFPNYSTFLA-KPGFYIEDIFVRECYRRKGFGRILLSAVAKQAVK 187 (237)
Q Consensus 110 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~vvG~~~~~~~~~~~~~-~~~~~i~~~~V~p~~rg~Gig~~ll~~~~~~a~~ 187 (237)
++.-+..+ ..+.++++...+++||.+.+.......++ ....+|.++.|++++||++||+.|+..+...+++
T Consensus 44 -------~~mk~~~~~Y~i~Vied~~s~~vigtatL~IE~KfIh~~g~rGhiEDVVV~~~~rgk~LGkllv~~Lv~l~k~ 116 (150)
T KOG3396|consen 44 -------EAMKKSGDWYYIVVIEDKESEKVIGTATLFIERKFIHGCGSRGHIEDVVVDSEYRGKQLGKLLVETLVDLAKS 116 (150)
T ss_pred -------HHHHhcCCcEEEEEEEeCCcCeEEEEEEEEEehhhhhcccccCceeEEEeChhhhhhHHhHHHHHHHHHHHHh
Confidence 11111122 34566677777899999999876544322 2357899999999999999999999999999999
Q ss_pred hCCcEEEEEEecCCHHHHHHHHHCCCEEece
Q 026503 188 MGYGRVEWIVLDWNVNAIKFYEEMGAKVLSE 218 (237)
Q Consensus 188 ~g~~~i~~~v~~~n~~a~~~y~k~GF~~~~~ 218 (237)
.|+.++.+.+...|.. ||+|+||...+.
T Consensus 117 lgcYKi~LdC~~~nv~---FYeKcG~s~~~~ 144 (150)
T KOG3396|consen 117 LGCYKIILDCDPKNVK---FYEKCGYSNAGN 144 (150)
T ss_pred cCcEEEEEecchhhhh---HHHHcCccccch
Confidence 9999999999888865 999999987663
No 35
>PHA01807 hypothetical protein
Probab=99.49 E-value=9.7e-13 Score=100.86 Aligned_cols=86 Identities=15% Similarity=0.164 Sum_probs=69.0
Q ss_pred CCCcEEEEecCCCccEEEEEEEecCCcccCCCCceEEEEEEEccchhcCChHHHHHHHHHHHHHHhCCcEEEEEEecCCH
Q 026503 123 PDRETFASDETHDVTVAGFVLFFPNYSTFLAKPGFYIEDIFVRECYRRKGFGRILLSAVAKQAVKMGYGRVEWIVLDWNV 202 (237)
Q Consensus 123 ~~~~~~~~~~~~~~~vvG~~~~~~~~~~~~~~~~~~i~~~~V~p~~rg~Gig~~ll~~~~~~a~~~g~~~i~~~v~~~n~ 202 (237)
.....+++.+++ ++||++.+....... ....+.+..++|+|+|||+|||+.||+.++++|++.|+..+.+.+...|.
T Consensus 51 ~~~~~lva~~dg--~lvG~~~l~~~~~~~-~~~i~~l~~lYV~pe~RG~GiG~~Ll~~~~~~Ar~~G~~~l~l~v~~~n~ 127 (153)
T PHA01807 51 NDRTELLVFRDG--KLAGIAVLVFEDDPH-VGPCLGVQWQYVLPEYRNAGVAREFLRELIRLAGEGNLPLIAFSHREGEG 127 (153)
T ss_pred CCceEEEEEECC--EEEEEEEEEcCCCcc-eeeeccceeEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEEecCCcH
Confidence 344456666644 999999987554221 11223455689999999999999999999999999999999999999999
Q ss_pred HHHHHHHHC
Q 026503 203 NAIKFYEEM 211 (237)
Q Consensus 203 ~a~~~y~k~ 211 (237)
++++||++.
T Consensus 128 ~a~~~y~~~ 136 (153)
T PHA01807 128 RYTIHYRRV 136 (153)
T ss_pred HHHHHHHhc
Confidence 999999985
No 36
>PF13508 Acetyltransf_7: Acetyltransferase (GNAT) domain; PDB: 3EY5_A 3FRM_B 3D8P_B 3GY9_A 3GYA_A 3S6F_A 2Q7B_A 1CM0_B 1XEB_B 1Y7R_A ....
Probab=99.48 E-value=8.2e-13 Score=90.04 Aligned_cols=77 Identities=31% Similarity=0.514 Sum_probs=61.5
Q ss_pred CcEEEEecCCCccEEEEEEEecCCcccCCCCceEEEEEEEccchhcCChHHHHHHHHHHHHHHhCCcEEEEEEecCCHHH
Q 026503 125 RETFASDETHDVTVAGFVLFFPNYSTFLAKPGFYIEDIFVRECYRRKGFGRILLSAVAKQAVKMGYGRVEWIVLDWNVNA 204 (237)
Q Consensus 125 ~~~~~~~~~~~~~vvG~~~~~~~~~~~~~~~~~~i~~~~V~p~~rg~Gig~~ll~~~~~~a~~~g~~~i~~~v~~~n~~a 204 (237)
..++++.+++ ++||++.+.... ...+|..++|+|+|||+|||+.|++.+.+.+.. ..+.+.+ ++.+
T Consensus 3 ~~~~~~~~~~--~ivG~~~~~~~~------~~~~i~~~~v~~~~rg~Gig~~ll~~~~~~~~~---~~i~l~~---~~~~ 68 (79)
T PF13508_consen 3 ERFFVAEDDG--EIVGFIRLWPNE------DFAYIGYLAVDPEYRGKGIGSKLLNYLLEKAKS---KKIFLFT---NPAA 68 (79)
T ss_dssp EEEEEEEETT--EEEEEEEEEETT------TEEEEEEEEE-GGGTTSSHHHHHHHHHHHHHTC---SEEEEEE---EHHH
T ss_pred cEEEEEEECC--EEEEEEEEEEcC------CEEEEEEEEECHHHcCCCHHHHHHHHHHHHcCC---CcEEEEE---cHHH
Confidence 3567777755 999999995543 257999999999999999999999999888743 4555444 6789
Q ss_pred HHHHHHCCCEE
Q 026503 205 IKFYEEMGAKV 215 (237)
Q Consensus 205 ~~~y~k~GF~~ 215 (237)
..||+|+||++
T Consensus 69 ~~fY~~~GF~~ 79 (79)
T PF13508_consen 69 IKFYEKLGFEE 79 (79)
T ss_dssp HHHHHHTTEEE
T ss_pred HHHHHHCcCCC
Confidence 99999999985
No 37
>PRK10562 putative acetyltransferase; Provisional
Probab=99.47 E-value=1.5e-12 Score=99.07 Aligned_cols=77 Identities=25% Similarity=0.486 Sum_probs=63.2
Q ss_pred cEEEEecCCCccEEEEEEEecCCcccCCCCceEEEEEEEccchhcCChHHHHHHHHHHHHHHhCCcEEEEEEecCCHHHH
Q 026503 126 ETFASDETHDVTVAGFVLFFPNYSTFLAKPGFYIEDIFVRECYRRKGFGRILLSAVAKQAVKMGYGRVEWIVLDWNVNAI 205 (237)
Q Consensus 126 ~~~~~~~~~~~~vvG~~~~~~~~~~~~~~~~~~i~~~~V~p~~rg~Gig~~ll~~~~~~a~~~g~~~i~~~v~~~n~~a~ 205 (237)
..+++..+ +++||++.+... ..+..++|+|+|||+|+|+.|++.+++. +..+.+.+...|..++
T Consensus 49 ~~~v~~~~--~~~iG~~~~~~~---------~~i~~~~v~~~~rg~G~g~~ll~~~~~~-----~~~~~~~v~~~N~~s~ 112 (145)
T PRK10562 49 QTWVWEED--GKLLGFVSVLEG---------RFVGALFVAPKAVRRGIGKALMQHVQQR-----YPHLSLEVYQKNQRAV 112 (145)
T ss_pred cEEEEEEC--CEEEEEEEEeec---------cEEEEEEECHHHcCCCHHHHHHHHHHhh-----CCeEEEEEEcCChHHH
Confidence 35566554 499999987432 2477899999999999999999988773 4567888999999999
Q ss_pred HHHHHCCCEEece
Q 026503 206 KFYEEMGAKVLSE 218 (237)
Q Consensus 206 ~~y~k~GF~~~~~ 218 (237)
+||+|+||+.++.
T Consensus 113 ~~y~k~Gf~~~~~ 125 (145)
T PRK10562 113 NFYHAQGFRIVDS 125 (145)
T ss_pred HHHHHCCCEEccc
Confidence 9999999999885
No 38
>TIGR03448 mycothiol_MshD mycothiol biosynthesis acetyltransferase. Members of this family are MshD, the acetyltransferase that catalyzes the final step of mycothiol biosynthesis in various members of the Actinomyctes, Mycothiol replaces glutathione in these species.
Probab=99.47 E-value=1.6e-12 Score=110.03 Aligned_cols=91 Identities=19% Similarity=0.228 Sum_probs=72.8
Q ss_pred EEEEecCCCccEEEEEEEecCCcccCCCCceEEEEEEEccchhcCChHHHHHHHHHHHHHHhCCcEEEEEEecCCHHHHH
Q 026503 127 TFASDETHDVTVAGFVLFFPNYSTFLAKPGFYIEDIFVRECYRRKGFGRILLSAVAKQAVKMGYGRVEWIVLDWNVNAIK 206 (237)
Q Consensus 127 ~~~~~~~~~~~vvG~~~~~~~~~~~~~~~~~~i~~~~V~p~~rg~Gig~~ll~~~~~~a~~~g~~~i~~~v~~~n~~a~~ 206 (237)
.+++.++ +++||++.+...... ..++..++|+|+|||+|||+.|++.+++.+. ..+.+.+...|..+++
T Consensus 48 ~~~~~~~--~~~vG~~~~~~~~~~-----~~~~~~l~V~p~~rg~GiG~~Ll~~~~~~~~----~~~~~~~~~~n~~a~~ 116 (292)
T TIGR03448 48 HLVAVDS--DPIVGYANLVPARGT-----DPAMAELVVHPAHRRRGIGRALIRALLAKGG----GRLRVWAHGDLPAARA 116 (292)
T ss_pred EEEEEEC--CEEEEEEEEEcCCCC-----cceEEEEEECHhhcCCCHHHHHHHHHHHhcc----CceEEEEcCCCHHHHH
Confidence 4555554 499999998654321 2468899999999999999999999998754 4567788889999999
Q ss_pred HHHHCCCEEeceEEEEeecchH
Q 026503 207 FYEEMGAKVLSEWRICRLTGDA 228 (237)
Q Consensus 207 ~y~k~GF~~~~~~~~~~~~~~~ 228 (237)
||+|+||+.++.+..++.+-..
T Consensus 117 fy~~~Gf~~~~~~~~~~~~l~~ 138 (292)
T TIGR03448 117 LASRLGLVPTRELLQMRRPLRD 138 (292)
T ss_pred HHHHCCCEEccEEEEEEecCCc
Confidence 9999999999988777665443
No 39
>COG1246 ArgA N-acetylglutamate synthase and related acetyltransferases [Amino acid transport and metabolism]
Probab=99.47 E-value=1e-12 Score=98.75 Aligned_cols=82 Identities=20% Similarity=0.244 Sum_probs=68.0
Q ss_pred EEEEecCCCccEEEEEEEecCCcccCCCCceEEEEEEEccchhcCChHHHHHHHHHHHHHHhCCcEEEEEEecCCHHHHH
Q 026503 127 TFASDETHDVTVAGFVLFFPNYSTFLAKPGFYIEDIFVRECYRRKGFGRILLSAVAKQAVKMGYGRVEWIVLDWNVNAIK 206 (237)
Q Consensus 127 ~~~~~~~~~~~vvG~~~~~~~~~~~~~~~~~~i~~~~V~p~~rg~Gig~~ll~~~~~~a~~~g~~~i~~~v~~~n~~a~~ 206 (237)
+++++. +|.+|||+.+.+.. ....++|..++|+|++||+|+|..|+..++..|++.|++.+.+.+. .+..
T Consensus 42 F~i~E~--~g~viGC~aL~~~~----~~~~gE~~~laV~pd~r~~G~G~~Ll~~~~~~Ar~~gi~~lf~LTt----~~~~ 111 (153)
T COG1246 42 FTIIER--DGKVIGCAALHPVL----EEDLGELRSLAVHPDYRGSGRGERLLERLLADARELGIKELFVLTT----RSPE 111 (153)
T ss_pred heeeee--CCcEEEEEeecccC----ccCeeeEEEEEECHHhcCCCcHHHHHHHHHHHHHHcCCceeeeeec----ccHH
Confidence 455555 45999999997521 2346899999999999999999999999999999999999976653 4557
Q ss_pred HHHHCCCEEece
Q 026503 207 FYEEMGAKVLSE 218 (237)
Q Consensus 207 ~y~k~GF~~~~~ 218 (237)
||+++||+.+..
T Consensus 112 ~F~~~GF~~vd~ 123 (153)
T COG1246 112 FFAERGFTRVDK 123 (153)
T ss_pred HHHHcCCeECcc
Confidence 999999998864
No 40
>PLN02825 amino-acid N-acetyltransferase
Probab=99.44 E-value=1.3e-12 Score=117.48 Aligned_cols=82 Identities=17% Similarity=0.265 Sum_probs=68.7
Q ss_pred cEEEEecCCCccEEEEEEEecCCcccCCCCceEEEEEEEccchhcCChHHHHHHHHHHHHHHhCCcEEEEEEecCCHHHH
Q 026503 126 ETFASDETHDVTVAGFVLFFPNYSTFLAKPGFYIEDIFVRECYRRKGFGRILLSAVAKQAVKMGYGRVEWIVLDWNVNAI 205 (237)
Q Consensus 126 ~~~~~~~~~~~~vvG~~~~~~~~~~~~~~~~~~i~~~~V~p~~rg~Gig~~ll~~~~~~a~~~g~~~i~~~v~~~n~~a~ 205 (237)
.+++++.++ ++|||+.+.+.. .....+|..++|+|+|||+|+|++||+.+++.|+++|+..+.+.+ ..+.
T Consensus 408 ~f~V~e~Dg--~IVG~aal~~~~----~~~~aEI~~laV~P~yRGkGiG~~LL~~le~~Ar~~G~~~L~Llt----t~a~ 477 (515)
T PLN02825 408 SFVVVEREG--SIIACAALFPFF----EEKCGEVAAIAVSPECRGQGQGDKLLDYIEKKAASLGLEKLFLLT----TRTA 477 (515)
T ss_pred cEEEEEECC--EEEEEEEEEeec----CCCcEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEEe----CcHH
Confidence 466676654 999999886432 234578999999999999999999999999999999999998765 3468
Q ss_pred HHHHHCCCEEec
Q 026503 206 KFYEEMGAKVLS 217 (237)
Q Consensus 206 ~~y~k~GF~~~~ 217 (237)
+||+|+||+..+
T Consensus 478 ~fY~k~GF~~~~ 489 (515)
T PLN02825 478 DWFVRRGFSECS 489 (515)
T ss_pred HHHHHCCCEEeC
Confidence 999999999876
No 41
>COG3153 Predicted acetyltransferase [General function prediction only]
Probab=99.43 E-value=2.3e-12 Score=99.65 Aligned_cols=134 Identities=19% Similarity=0.223 Sum_probs=96.3
Q ss_pred eEEEecccCCCChhHHHHHHHHHHHhhccccccccchhhHHhhhcCCCCCcceeeeeeeccCCCCCCCCCCCCCCCCCCc
Q 026503 30 LFSRIRLATPADVPHIHKLIHQMAVFEKLTHLFSATESSLAATLFNSPPFTSFTVLLLEVSPSPFAPLHSPASSPSPYSP 109 (237)
Q Consensus 30 ~~~~ir~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~e~~~~~~~~~~~~~~~~~~~~~ 109 (237)
|.|.||..++.|++.+..+.+..+. +.....+.+.+-....+
T Consensus 2 ~~~~ir~e~~~d~~~i~~~~~~aF~--------~~~e~~~v~~lR~~~~~------------------------------ 43 (171)
T COG3153 2 MMMLIRTETPADIPAIEALTREAFG--------PGREAKLVDKLREGGRP------------------------------ 43 (171)
T ss_pred CccEEEecChhhHHHHHHHHHHHhh--------cchHHHHHHHHHhcCCc------------------------------
Confidence 5678999999999999999977653 11122223322222111
Q ss_pred cchhhhcccCCCCCCCcEEEEecCCCccEEEEEEEecCCcccCCCCceEEEEEEEccchhcCChHHHHHHHHHHHHHHhC
Q 026503 110 VDRIVYLDLPLDDPDRETFASDETHDVTVAGFVLFFPNYSTFLAKPGFYIEDIFVRECYRRKGFGRILLSAVAKQAVKMG 189 (237)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvG~~~~~~~~~~~~~~~~~~i~~~~V~p~~rg~Gig~~ll~~~~~~a~~~g 189 (237)
.....+++.++ |++||.+.+.+..-.-.......+..+.|+|+|||||||++|++..++.++..|
T Consensus 44 -------------~~~LslVA~d~--g~vvG~Il~s~v~~~g~~~~~~~LaPLaV~p~~qg~GIG~~Lvr~~le~a~~~G 108 (171)
T COG3153 44 -------------DLTLSLVAEDD--GEVVGHILFSPVTVGGEELGWLGLAPLAVDPEYQGQGIGSALVREGLEALRLAG 108 (171)
T ss_pred -------------ccceeEEEeeC--CEEEEEEEEeEEEecCcccceEEEEeEEEchhhcCCcHHHHHHHHHHHHHHHCC
Confidence 22345666664 599999999764322112345778899999999999999999999999999999
Q ss_pred CcEEEEEEecCCHHHHHHHHHCCCEEeceEEEE
Q 026503 190 YGRVEWIVLDWNVNAIKFYEEMGAKVLSEWRIC 222 (237)
Q Consensus 190 ~~~i~~~v~~~n~~a~~~y~k~GF~~~~~~~~~ 222 (237)
+..++ .-+++. +|.|+||+.......+
T Consensus 109 ~~~v~---vlGdp~---YY~rfGF~~~~~~~l~ 135 (171)
T COG3153 109 ASAVV---VLGDPT---YYSRFGFEPAAGAKLY 135 (171)
T ss_pred CCEEE---EecCcc---cccccCcEEccccccc
Confidence 99884 445554 9999999998765444
No 42
>PRK12308 bifunctional argininosuccinate lyase/N-acetylglutamate synthase; Provisional
Probab=99.42 E-value=2.2e-12 Score=119.68 Aligned_cols=83 Identities=16% Similarity=0.157 Sum_probs=67.3
Q ss_pred cEEEEecCCCccEEEEEEEecCCcccCCCCceEEEEEEEccchhcCChHHHHHHHHHHHHHHhCCcEEEEEEecCCHHHH
Q 026503 126 ETFASDETHDVTVAGFVLFFPNYSTFLAKPGFYIEDIFVRECYRRKGFGRILLSAVAKQAVKMGYGRVEWIVLDWNVNAI 205 (237)
Q Consensus 126 ~~~~~~~~~~~~vvG~~~~~~~~~~~~~~~~~~i~~~~V~p~~rg~Gig~~ll~~~~~~a~~~g~~~i~~~v~~~n~~a~ 205 (237)
.++++.+++ ++|||+.+.... ....+|..++|+|+|||||||+.|++.++++++++|+..+.+.+ .+.
T Consensus 504 ~~~Va~~~g--~IVG~~~l~~~~-----~~~~~I~~i~V~P~~rGkGIGk~Ll~~l~~~ak~~g~~~i~l~~-----~a~ 571 (614)
T PRK12308 504 SFAVAEHHG--EVTGCASLYIYD-----SGLAEIRSLGVEAGWQVQGQGSALVQYLVEKARQMAIKKVFVLT-----RVP 571 (614)
T ss_pred cEEEEEECC--EEEEEEEEEEcC-----CCeEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEee-----CcH
Confidence 356666544 999999886432 12468999999999999999999999999999999999987654 235
Q ss_pred HHHHHCCCEEeceEE
Q 026503 206 KFYEEMGAKVLSEWR 220 (237)
Q Consensus 206 ~~y~k~GF~~~~~~~ 220 (237)
+||+|+||+.++...
T Consensus 572 ~FYek~GF~~~~~~~ 586 (614)
T PRK12308 572 EFFMKQGFSPTSKSL 586 (614)
T ss_pred HHHHHCCCEECCccc
Confidence 899999999988643
No 43
>PRK05279 N-acetylglutamate synthase; Validated
Probab=99.41 E-value=1.5e-12 Score=116.52 Aligned_cols=82 Identities=17% Similarity=0.228 Sum_probs=67.2
Q ss_pred EEEEecCCCccEEEEEEEecCCcccCCCCceEEEEEEEccchhcCChHHHHHHHHHHHHHHhCCcEEEEEEecCCHHHHH
Q 026503 127 TFASDETHDVTVAGFVLFFPNYSTFLAKPGFYIEDIFVRECYRRKGFGRILLSAVAKQAVKMGYGRVEWIVLDWNVNAIK 206 (237)
Q Consensus 127 ~~~~~~~~~~~vvG~~~~~~~~~~~~~~~~~~i~~~~V~p~~rg~Gig~~ll~~~~~~a~~~g~~~i~~~v~~~n~~a~~ 206 (237)
++++.+++ ++||++.+..... ....+|..++|+|+|||+|+|++|++.++++++++|+..+.+. +..+++
T Consensus 336 ~~va~~dg--~iVG~~~~~~~~~----~~~~~I~~l~V~p~~Rg~GiG~~Ll~~l~~~a~~~g~~~l~l~----~~~a~~ 405 (441)
T PRK05279 336 FTVIERDG--LIIGCAALYPFPE----EKMGEMACLAVHPDYRGSGRGERLLKRIEQRARQLGLKRLFVL----TTRTAH 405 (441)
T ss_pred EEEEEECC--EEEEEEEEEEcCC----CCeEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHcCCCEEEEe----cchHHH
Confidence 56666544 9999998764322 2347899999999999999999999999999999999988543 246889
Q ss_pred HHHHCCCEEece
Q 026503 207 FYEEMGAKVLSE 218 (237)
Q Consensus 207 ~y~k~GF~~~~~ 218 (237)
||+|+||+.++.
T Consensus 406 fY~k~GF~~~g~ 417 (441)
T PRK05279 406 WFLERGFVPVDV 417 (441)
T ss_pred HHHHCcCEECCh
Confidence 999999999986
No 44
>PRK10314 putative acyltransferase; Provisional
Probab=99.40 E-value=4.4e-12 Score=97.54 Aligned_cols=87 Identities=14% Similarity=0.163 Sum_probs=68.2
Q ss_pred CcEEEEecCCCccEEEEEEEecCCcccCCCCceEEEEEEEccchhcCChHHHHHHHHHHHHHHh-CCcEEEEEEecCCHH
Q 026503 125 RETFASDETHDVTVAGFVLFFPNYSTFLAKPGFYIEDIFVRECYRRKGFGRILLSAVAKQAVKM-GYGRVEWIVLDWNVN 203 (237)
Q Consensus 125 ~~~~~~~~~~~~~vvG~~~~~~~~~~~~~~~~~~i~~~~V~p~~rg~Gig~~ll~~~~~~a~~~-g~~~i~~~v~~~n~~ 203 (237)
...+++.++ +++||++.+..... .....+|..++|+|+|||+|||+.||+.++++++.. +...+.+.+ +..
T Consensus 48 ~~h~~~~~~--~~~vg~~r~~~~~~---~~~~~~i~rv~V~~~~rG~GiG~~Lm~~~~~~~~~~~~~~~i~L~a---~~~ 119 (153)
T PRK10314 48 NRHILGWKN--DELVAYARILKSDD---DLEPVVIGRVIVSEALRGEKVGQQLMSKTLESCTRHWPDKPVYLGA---QAH 119 (153)
T ss_pred cEEEEEEEC--CEEEEEEEEecCCC---CCCCEEEEEEEECHHHhCCCHHHHHHHHHHHHHHHHCCCCcEEEeh---HHH
Confidence 334555554 49999999875322 122478999999999999999999999999998876 666776554 567
Q ss_pred HHHHHHHCCCEEeceE
Q 026503 204 AIKFYEEMGAKVLSEW 219 (237)
Q Consensus 204 a~~~y~k~GF~~~~~~ 219 (237)
+..||+|+||+.+++.
T Consensus 120 a~~fY~k~GF~~~g~~ 135 (153)
T PRK10314 120 LQNFYQSFGFIPVTEV 135 (153)
T ss_pred HHHHHHHCCCEECCCc
Confidence 8899999999999873
No 45
>TIGR01890 N-Ac-Glu-synth amino-acid N-acetyltransferase. This model represents a clade of amino-acid N-acetyltransferases acting mainly on glutamate in the first step of the "acetylated" ornithine biosynthesis pathway. For this reason it is also called N-acetylglutamate synthase. The enzyme may also act on aspartate.
Probab=99.40 E-value=2e-12 Score=115.29 Aligned_cols=82 Identities=20% Similarity=0.231 Sum_probs=66.6
Q ss_pred EEEEecCCCccEEEEEEEecCCcccCCCCceEEEEEEEccchhcCChHHHHHHHHHHHHHHhCCcEEEEEEecCCHHHHH
Q 026503 127 TFASDETHDVTVAGFVLFFPNYSTFLAKPGFYIEDIFVRECYRRKGFGRILLSAVAKQAVKMGYGRVEWIVLDWNVNAIK 206 (237)
Q Consensus 127 ~~~~~~~~~~~vvG~~~~~~~~~~~~~~~~~~i~~~~V~p~~rg~Gig~~ll~~~~~~a~~~g~~~i~~~v~~~n~~a~~ 206 (237)
+++++++ +++|||+.+.+... ....+|..++|+|+|||+|+|++|++.++++|+++|+..+.+ ...| +.+
T Consensus 324 ~~V~~~d--g~iVG~~~~~~~~~----~~~~~I~~l~V~p~~Rg~GiG~~Ll~~l~~~A~~~G~~~l~v--~~~~--a~~ 393 (429)
T TIGR01890 324 FSIIEHD--GNIIGCAALYPYAE----EDCGEMACLAVSPEYQDGGRGERLLAHIEDRARQMGISRLFV--LTTR--TGH 393 (429)
T ss_pred EEEEEEC--CEEEEEEEEEecCC----CCeEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHcCCCEEEE--eecc--hHH
Confidence 4556554 49999999875422 234788899999999999999999999999999999998753 3334 579
Q ss_pred HHHHCCCEEece
Q 026503 207 FYEEMGAKVLSE 218 (237)
Q Consensus 207 ~y~k~GF~~~~~ 218 (237)
||+|+||+.++.
T Consensus 394 fY~k~GF~~~g~ 405 (429)
T TIGR01890 394 WFRERGFQTASV 405 (429)
T ss_pred HHHHCCCEECCh
Confidence 999999999976
No 46
>PRK01346 hypothetical protein; Provisional
Probab=99.40 E-value=5.2e-12 Score=112.13 Aligned_cols=94 Identities=15% Similarity=0.084 Sum_probs=74.8
Q ss_pred EEEEecCCCccEEEEEEEecCCcccC-C--CCceEEEEEEEccchhcCChHHHHHHHHHHHHHHhCCcEEEEEEecCCHH
Q 026503 127 TFASDETHDVTVAGFVLFFPNYSTFL-A--KPGFYIEDIFVRECYRRKGFGRILLSAVAKQAVKMGYGRVEWIVLDWNVN 203 (237)
Q Consensus 127 ~~~~~~~~~~~vvG~~~~~~~~~~~~-~--~~~~~i~~~~V~p~~rg~Gig~~ll~~~~~~a~~~g~~~i~~~v~~~n~~ 203 (237)
.+++.++ +++||++.+.+...... + .+..+|..++|+|+|||+|||++||+++++.++++|+..+.+.+..
T Consensus 49 ~~va~~~--~~lvg~~~~~~~~~~~~~~~~~~~~~i~~v~V~P~~RgrGig~~Ll~~~l~~a~~~g~~~~~L~~~~---- 122 (411)
T PRK01346 49 TLGAFDG--DEVVGTAGAFDLRLTVPGGAVLPAAGVTAVTVAPTHRRRGLLTALMREQLRRIRERGEPVAALTASE---- 122 (411)
T ss_pred eEEEEEC--CEEEEEEEEeccccccCCCCccceeEEEEEEEChhhcCCCHHHHHHHHHHHHHHHCCCcEEEEECCc----
Confidence 4556654 49999999875432222 1 2468899999999999999999999999999999998877766543
Q ss_pred HHHHHHHCCCEEeceEEEEeecch
Q 026503 204 AIKFYEEMGAKVLSEWRICRLTGD 227 (237)
Q Consensus 204 a~~~y~k~GF~~~~~~~~~~~~~~ 227 (237)
..||+|+||........++++..
T Consensus 123 -~~~Y~r~Gf~~~~~~~~~~i~~~ 145 (411)
T PRK01346 123 -GGIYGRFGYGPATYSQSLSVDRR 145 (411)
T ss_pred -hhhHhhCCCeeccceEEEEEccc
Confidence 36999999999999888877665
No 47
>PF08445 FR47: FR47-like protein; InterPro: IPR013653 Proteins in this entry have a conserved region similar to the C-terminal region of the Drosophila melanogaster (Fruit fly) hypothetical protein FR47 (Q9VR51 from SWISSPROT). This protein has been found to consist of two N-acyltransferase-like domains swapped with the C-terminal strands. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups; PDB: 1SQH_A 3EC4_B.
Probab=99.36 E-value=2.9e-11 Score=83.83 Aligned_cols=79 Identities=22% Similarity=0.285 Sum_probs=61.9
Q ss_pred ecCCCccEEEEEEEecCCcccCCCCceEEEEEEEccchhcCChHHHHHHHHHHHHHHhCCcEEEEEEecCCHHHHHHHHH
Q 026503 131 DETHDVTVAGFVLFFPNYSTFLAKPGFYIEDIFVRECYRRKGFGRILLSAVAKQAVKMGYGRVEWIVLDWNVNAIKFYEE 210 (237)
Q Consensus 131 ~~~~~~~vvG~~~~~~~~~~~~~~~~~~i~~~~V~p~~rg~Gig~~ll~~~~~~a~~~g~~~i~~~v~~~n~~a~~~y~k 210 (237)
.+++.+.+++++.-.. ...|..+++.|+|||||+|+.++..+.+.+.+.|.. ..+.+...|.+|+++|+|
T Consensus 5 f~~~~~~l~~~~~~~~---------~g~i~~v~t~p~~RrrGlg~~lv~~l~~~~~~~g~~-~~l~v~~~N~~s~~ly~k 74 (86)
T PF08445_consen 5 FDGELVALVAWIIRSD---------DGEIGGVYTLPEHRRRGLGSALVAALARELLERGKT-PFLYVDADNEASIRLYEK 74 (86)
T ss_dssp ECTCCEEEEEEEEESC---------TCCEEEEEE-GGGTTSSHHHHHHHHHHHHHHHTTSE-EEEEEETT-HHHHHHHHH
T ss_pred EECCccceeeEeeeCC---------CcEEEEEEECHHHcCCCHHHHHHHHHHHHHHhCCCc-EEEEEECCCHHHHHHHHH
Confidence 3333457777775432 257889999999999999999999999998888765 567899999999999999
Q ss_pred CCCEEeceE
Q 026503 211 MGAKVLSEW 219 (237)
Q Consensus 211 ~GF~~~~~~ 219 (237)
+||+...+.
T Consensus 75 lGf~~~~~~ 83 (86)
T PF08445_consen 75 LGFREIEEE 83 (86)
T ss_dssp CT-EEEEEE
T ss_pred cCCEEEEEE
Confidence 999998654
No 48
>KOG3235 consensus Subunit of the major N alpha-acetyltransferase [General function prediction only]
Probab=99.34 E-value=1.7e-11 Score=91.73 Aligned_cols=99 Identities=20% Similarity=0.275 Sum_probs=81.1
Q ss_pred EEEecCCCccEEEEEEEecCCcccCCCCceEEEEEEEccchhcCChHHHHHHHHHHHHHHh-CCcEEEEEEecCCHHHHH
Q 026503 128 FASDETHDVTVAGFVLFFPNYSTFLAKPGFYIEDIFVRECYRRKGFGRILLSAVAKQAVKM-GYGRVEWIVLDWNVNAIK 206 (237)
Q Consensus 128 ~~~~~~~~~~vvG~~~~~~~~~~~~~~~~~~i~~~~V~p~~rg~Gig~~ll~~~~~~a~~~-g~~~i~~~v~~~n~~a~~ 206 (237)
|++++ .+|++||++........-...+...|..++|...||+.|||+.||..+..-+.+. +.+.+.++|..+|.+++.
T Consensus 44 yVA~D-~~gkiVGYvlAkmee~p~~~~~hGhItSlaV~rs~RrlGla~kLm~qa~rAm~E~~~A~yvsLHVR~SNraAl~ 122 (193)
T KOG3235|consen 44 YVAED-ENGKIVGYVLAKMEEDPDDEPPHGHITSLAVKRSYRRLGLAQKLMNQASRAMVEVYEAKYVSLHVRKSNRAALH 122 (193)
T ss_pred EEEEc-CCCcEEEEeeeehhhcccCCCCCCeeEEeeehhhHHHhhHHHHHHHHHHHHHHHhhcceEEEEeeecccHHHHH
Confidence 44442 2569999999987653333444678999999999999999999999998887775 899999999999999999
Q ss_pred HHH-HCCCEEeceEEEEeecch
Q 026503 207 FYE-EMGAKVLSEWRICRLTGD 227 (237)
Q Consensus 207 ~y~-k~GF~~~~~~~~~~~~~~ 227 (237)
+|+ -+||++.+--..|..+|.
T Consensus 123 LY~~tl~F~v~eve~kYYadGe 144 (193)
T KOG3235|consen 123 LYKNTLGFVVCEVEPKYYADGE 144 (193)
T ss_pred hhhhccceEEeecccccccccH
Confidence 998 999999987766655554
No 49
>PRK13688 hypothetical protein; Provisional
Probab=99.32 E-value=2e-11 Score=94.04 Aligned_cols=86 Identities=9% Similarity=0.153 Sum_probs=60.7
Q ss_pred CCcEEEEecCCCccEEEEEEEecCCcc-----cCCCCceEEEEEEEccchhcCChHHHHHHHHHHHHHHhCCcEEEEEEe
Q 026503 124 DRETFASDETHDVTVAGFVLFFPNYST-----FLAKPGFYIEDIFVRECYRRKGFGRILLSAVAKQAVKMGYGRVEWIVL 198 (237)
Q Consensus 124 ~~~~~~~~~~~~~~vvG~~~~~~~~~~-----~~~~~~~~i~~~~V~p~~rg~Gig~~ll~~~~~~a~~~g~~~i~~~v~ 198 (237)
...++++.+++ ++||++.+...... ......++|..++|+|+|||||||++|++.+. +.++. + .+.
T Consensus 44 ~~~~~~~~~~~--~~VG~~~l~~~dg~~~~~~~~~~~~~~L~~l~V~p~~rgkGiG~~Ll~~a~----~~~~~-~--~~~ 114 (156)
T PRK13688 44 ESPFYGIYYGD--SLVARMSLYKKGGVEEPYFEDTQDYLELWKLEVLPKYQNRGYGEMLVDFAK----SFQLP-I--KTI 114 (156)
T ss_pred CCCEEEEEECC--EEEEEEEEEecCCcccccccCCCCeEEEEEEEECHHHcCCCHHHHHHHHHH----HhCCe-E--EEE
Confidence 34556666644 99999877432110 01234578999999999999999999998543 44543 2 344
Q ss_pred cCCHHHHHHHHHCCCEEeceE
Q 026503 199 DWNVNAIKFYEEMGAKVLSEW 219 (237)
Q Consensus 199 ~~n~~a~~~y~k~GF~~~~~~ 219 (237)
..| .+.+||+|+||+.++..
T Consensus 115 ~~~-~a~~FY~k~GF~~~~~~ 134 (156)
T PRK13688 115 ARN-KSKDFWLKLGFTPVEYK 134 (156)
T ss_pred ecc-chHHHHHhCCCEEeEEe
Confidence 555 57899999999998765
No 50
>KOG2488 consensus Acetyltransferase (GNAT) domain-containing protein [General function prediction only]
Probab=99.29 E-value=1.9e-11 Score=94.34 Aligned_cols=90 Identities=28% Similarity=0.445 Sum_probs=76.1
Q ss_pred EEEEecCCCccEEEEEEEecCCcccCCCCceEEEEEEEccchhcCChHHHHHHHHHHHHHHhCCcEEEEEEecCCHHHHH
Q 026503 127 TFASDETHDVTVAGFVLFFPNYSTFLAKPGFYIEDIFVRECYRRKGFGRILLSAVAKQAVKMGYGRVEWIVLDWNVNAIK 206 (237)
Q Consensus 127 ~~~~~~~~~~~vvG~~~~~~~~~~~~~~~~~~i~~~~V~p~~rg~Gig~~ll~~~~~~a~~~g~~~i~~~v~~~n~~a~~ 206 (237)
.|++.-++.+++|||..+...-.. +-+.+|...+-|.+.|||+|||+.||+.+...+.....++|.+.|...|.+++.
T Consensus 93 ~Yi~a~~~~~~~vgf~~Frf~vd~--g~~vlYcyEvqv~~~yR~kGiGk~LL~~l~~~a~~~~~~kVmLTVf~~N~~al~ 170 (202)
T KOG2488|consen 93 RYICAWNNKSKLVGFTMFRFTVDT--GDPVLYCYEVQVASAYRGKGIGKFLLDTLEKLADSRHMRKVMLTVFSENIRALG 170 (202)
T ss_pred eEEEEEcCCCceeeEEEEEEEccc--CCeEEEEEEEeehhhhhccChHHHHHHHHHHHHHHHHhhhheeeeecccchhHH
Confidence 344433334499999999765432 456788999999999999999999999999999999999999999999999999
Q ss_pred HHHHCCCEEece
Q 026503 207 FYEEMGAKVLSE 218 (237)
Q Consensus 207 ~y~k~GF~~~~~ 218 (237)
||+++||....+
T Consensus 171 Fy~~~gf~~~~~ 182 (202)
T KOG2488|consen 171 FYHRLGFVVDEE 182 (202)
T ss_pred HHHHcCcccCCC
Confidence 999999998754
No 51
>COG1670 RimL Acetyltransferases, including N-acetylases of ribosomal proteins [Translation, ribosomal structure and biogenesis]
Probab=99.22 E-value=2.6e-10 Score=89.26 Aligned_cols=85 Identities=24% Similarity=0.252 Sum_probs=69.9
Q ss_pred CccEEEEEEEecCCcccCCCCceEEEEEEEccchhcCChHHHHHHHHHHHHHHh-CCcEEEEEEecCCHHHHHHHHHCCC
Q 026503 135 DVTVAGFVLFFPNYSTFLAKPGFYIEDIFVRECYRRKGFGRILLSAVAKQAVKM-GYGRVEWIVLDWNVNAIKFYEEMGA 213 (237)
Q Consensus 135 ~~~vvG~~~~~~~~~~~~~~~~~~i~~~~V~p~~rg~Gig~~ll~~~~~~a~~~-g~~~i~~~v~~~n~~a~~~y~k~GF 213 (237)
++++||.+.+..... ..........+.+.|+|||+|+|+.++..+++++... ++.++.+.|...|.+|+++++|+||
T Consensus 76 ~~~~iG~~~~~~~~~--~~~~~~~~ig~~l~~~~~g~G~~tea~~~~l~~~f~~~~l~ri~~~~~~~N~~S~rv~ek~Gf 153 (187)
T COG1670 76 DGELIGVIGLSDIDR--AANGDLAEIGYWLDPEYWGKGYATEALRALLDYAFEELGLHRIEATVDPENEASIRVYEKLGF 153 (187)
T ss_pred CCeEEEEEEEEEecc--ccccceEEEEEEEChHHhcCchHHHHHHHHHHHhhhhcCceEEEEEecCCCHHHHHHHHHcCC
Confidence 358999999975432 1112233447777999999999999999999999884 9999999999999999999999999
Q ss_pred EEeceEEE
Q 026503 214 KVLSEWRI 221 (237)
Q Consensus 214 ~~~~~~~~ 221 (237)
+..+..+.
T Consensus 154 ~~eg~~~~ 161 (187)
T COG1670 154 RLEGELRQ 161 (187)
T ss_pred hhhhhhhh
Confidence 99987643
No 52
>cd02169 Citrate_lyase_ligase Citrate lyase ligase. Citrate lyase ligase, also known as [Citrate (pro-3S)-lyase] ligase, is responsible for acetylation of the (2-(5''-phosphoribosyl)-3'-dephosphocoenzyme-A) prosthetic group of the gamma subunit of citrate lyase, converting the inactive thiol form of this enzyme to the active form. The acetylation of 1 molecule of deacetyl-citrate lyase to enzymatically active citrate lyase requires 6 molecules of ATP. The Adenylylyltranferase activity of the enzyme involves the formation of AMP and and pyrophosphate in the acetylation reaction.
Probab=99.22 E-value=8.9e-11 Score=99.30 Aligned_cols=77 Identities=17% Similarity=0.138 Sum_probs=64.6
Q ss_pred cEEEEecCCCccEEEEEEEecCCcccCCCCceEEEEEEEccchhcCChHHHHHHHHHHHHHHhCCcEEEEEEecCCHHHH
Q 026503 126 ETFASDETHDVTVAGFVLFFPNYSTFLAKPGFYIEDIFVRECYRRKGFGRILLSAVAKQAVKMGYGRVEWIVLDWNVNAI 205 (237)
Q Consensus 126 ~~~~~~~~~~~~vvG~~~~~~~~~~~~~~~~~~i~~~~V~p~~rg~Gig~~ll~~~~~~a~~~g~~~i~~~v~~~n~~a~ 205 (237)
.+++..++ +++||++.+.. ..|..++|+|+|||+|||+.||+.+++.++++|+..+.+.+...| .
T Consensus 7 ~~~v~~~~--~~iVG~~~l~~----------~~I~~vaV~p~~Rg~GiG~~Ll~~l~~~a~~~g~~~i~L~t~~~~---~ 71 (297)
T cd02169 7 TVGIFDDA--GELIATGSIAG----------NVLKCVAVCPKYQGEGLALKIVSELINKAYEEGIFHLFLFTKPKN---A 71 (297)
T ss_pred EEEEEEEC--CEEEEEEEecc----------CEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEEEcccH---H
Confidence 35555554 49999998742 258899999999999999999999999999999999988776544 5
Q ss_pred HHHHHCCCEEec
Q 026503 206 KFYEEMGAKVLS 217 (237)
Q Consensus 206 ~~y~k~GF~~~~ 217 (237)
.||+|+||+.++
T Consensus 72 ~fYek~GF~~~~ 83 (297)
T cd02169 72 KFFRGLGFKELA 83 (297)
T ss_pred HHHHHCCCEEec
Confidence 899999999988
No 53
>KOG3138 consensus Predicted N-acetyltransferase [General function prediction only]
Probab=99.19 E-value=4.2e-11 Score=93.67 Aligned_cols=70 Identities=31% Similarity=0.352 Sum_probs=63.8
Q ss_pred ceEEEEEEEccchhcCChHHHHHHHHHHHHHHhC-CcEEEEEEecCCHHHHHHHHHCCCEEeceEEEEeec
Q 026503 156 GFYIEDIFVRECYRRKGFGRILLSAVAKQAVKMG-YGRVEWIVLDWNVNAIKFYEEMGAKVLSEWRICRLT 225 (237)
Q Consensus 156 ~~~i~~~~V~p~~rg~Gig~~ll~~~~~~a~~~g-~~~i~~~v~~~n~~a~~~y~k~GF~~~~~~~~~~~~ 225 (237)
.++|..++|.+.||.+|||+.|++.+.+++.+.. ++.+.+++...|..++.||++.||+.++....|...
T Consensus 89 ~~yi~~Lgvl~~yR~~gIGs~Ll~~~~~~~~~~~~~~~v~lHv~~~n~~ai~~Y~~~gF~~~~~~~~~y~~ 159 (187)
T KOG3138|consen 89 VIYILSLGVLPRYRNKGIGSKLLEFVKKYCSEAHQCRRVYLHVQAVNESAIEFYEKRGFEIVERLKNYYSI 159 (187)
T ss_pred eeEEEeecccHHHHhcchHHHHHHHHHHHHhcccccceEEEEEEeCCCcHHHHHHhcCceEeecccccccc
Confidence 3889999999999999999999999999998886 888999999999999999999999999987554443
No 54
>COG3393 Predicted acetyltransferase [General function prediction only]
Probab=99.17 E-value=3e-10 Score=92.37 Aligned_cols=83 Identities=19% Similarity=0.235 Sum_probs=70.9
Q ss_pred CccEEEEEEEecCCcccCCCCceEEEEEEEccchhcCChHHHHHHHHHHHHHHhCCcEEEEEEecCCHHHHHHHHHCCCE
Q 026503 135 DVTVAGFVLFFPNYSTFLAKPGFYIEDIFVRECYRRKGFGRILLSAVAKQAVKMGYGRVEWIVLDWNVNAIKFYEEMGAK 214 (237)
Q Consensus 135 ~~~vvG~~~~~~~~~~~~~~~~~~i~~~~V~p~~rg~Gig~~ll~~~~~~a~~~g~~~i~~~v~~~n~~a~~~y~k~GF~ 214 (237)
+|++|+.+...... ..+..|..+|++|+|||||+++.|+..+....-..| +.-++.+...|+.|.+.|+|+||+
T Consensus 185 d~~iVa~A~t~a~~-----~~~~~I~gV~T~peyR~kGyAt~lva~L~~~lL~eG-k~~~L~~~~~N~~A~~iY~riGF~ 258 (268)
T COG3393 185 DGKIVAKAETAAEN-----PAYAQINGVYTHPEYRGKGYATALVATLAAKLLAEG-KIPCLFVNSDNPVARRIYQRIGFR 258 (268)
T ss_pred CCcEEEeeeccccC-----CcceEEEEEEcCHHHccccHHHHHHHHHHHHHHhCC-CeeEEEEecCCHHHHHHHHHhCCe
Confidence 55999999876543 346889999999999999999999999998877776 445677889999999999999999
Q ss_pred EeceEEEEe
Q 026503 215 VLSEWRICR 223 (237)
Q Consensus 215 ~~~~~~~~~ 223 (237)
..|++..+-
T Consensus 259 ~~g~~~~~~ 267 (268)
T COG3393 259 EIGEFREYI 267 (268)
T ss_pred ecceEEEEe
Confidence 999987663
No 55
>COG3981 Predicted acetyltransferase [General function prediction only]
Probab=99.12 E-value=2.6e-10 Score=86.90 Aligned_cols=95 Identities=25% Similarity=0.314 Sum_probs=81.0
Q ss_pred CccEEEEEEEecCCcccCCCCceEEEEEEEccchhcCChHHHHHHHHHHHHHHhCCcEEEEEEecCCHHHHHHHHHCCCE
Q 026503 135 DVTVAGFVLFFPNYSTFLAKPGFYIEDIFVRECYRRKGFGRILLSAVAKQAVKMGYGRVEWIVLDWNVNAIKFYEEMGAK 214 (237)
Q Consensus 135 ~~~vvG~~~~~~~~~~~~~~~~~~i~~~~V~p~~rg~Gig~~ll~~~~~~a~~~g~~~i~~~v~~~n~~a~~~y~k~GF~ 214 (237)
++++||++.+....+++......+| +..|+|+.||||+|++||+.+++.|++.|+..+.+.|...|.+|.+..+++|-.
T Consensus 77 d~~ivG~i~lRh~Ln~~ll~~gGHI-GY~VrPseR~KGYA~emLkl~L~~ar~lgi~~Vlvtcd~dN~ASrkvI~~NGGi 155 (174)
T COG3981 77 DGQIVGFINLRHQLNDFLLEEGGHI-GYSVRPSERRKGYAKEMLKLALEKARELGIKKVLVTCDKDNIASRKVIEANGGI 155 (174)
T ss_pred CCcEEEEEEeeeecchHHHhcCCcc-cceeChhhhccCHHHHHHHHHHHHHHHcCCCeEEEEeCCCCchhhHHHHhcCCE
Confidence 5699999999988777655446666 788999999999999999999999999999999999999999999999999999
Q ss_pred EeceEEEEeecchHHhhhh
Q 026503 215 VLSEWRICRLTGDALDAYG 233 (237)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~ 233 (237)
..+++..- |+...+||
T Consensus 156 le~~~~~~---g~~~~RYW 171 (174)
T COG3981 156 LENEFFGE---GKEIRRYW 171 (174)
T ss_pred EeEEEccC---Cceeeeee
Confidence 88875432 55544443
No 56
>KOG3234 consensus Acetyltransferase, (GNAT) family [General function prediction only]
Probab=99.05 E-value=2.6e-09 Score=80.07 Aligned_cols=92 Identities=17% Similarity=0.103 Sum_probs=77.5
Q ss_pred CccEEEEEEEecCCcccCCCCceEEEEEEEccchhcCChHHHHHHHHHHHHHHhCCcEEEEEEecCCHHHHHHHHHCCCE
Q 026503 135 DVTVAGFVLFFPNYSTFLAKPGFYIEDIFVRECYRRKGFGRILLSAVAKQAVKMGYGRVEWIVLDWNVNAIKFYEEMGAK 214 (237)
Q Consensus 135 ~~~vvG~~~~~~~~~~~~~~~~~~i~~~~V~p~~rg~Gig~~ll~~~~~~a~~~g~~~i~~~v~~~n~~a~~~y~k~GF~ 214 (237)
++++-|+++...... ......++.-+.|.|+||+.|+|+.|+..+++.....+...+.+.|..+|.-|+.+|+|+||.
T Consensus 50 ~~~imgyimgk~Eg~--~~~wh~HvTAltVap~~Rrl~la~~lm~~led~~d~~~a~fvDLfVr~sN~iAI~mYkkLGY~ 127 (173)
T KOG3234|consen 50 TGEIMGYIMGKVEGK--DTEWHGHVTALTVAPDYRRLGLAAKLMDTLEDVSDVDNAYFVDLFVRVSNQIAIDMYKKLGYS 127 (173)
T ss_pred CCceEEEEeeecccc--CcceeeEEEEEEechhHHHHHHHHHHHHHHHHHHHhhhhheeeeeeeccchhHHHHHHhcCce
Confidence 468999998855432 234457788999999999999999999999999988888999999999999999999999999
Q ss_pred EeceEEEEeecchH
Q 026503 215 VLSEWRICRLTGDA 228 (237)
Q Consensus 215 ~~~~~~~~~~~~~~ 228 (237)
+.+...-|...|..
T Consensus 128 ~YR~Vi~YY~~g~d 141 (173)
T KOG3234|consen 128 VYRTVIEYYSVGPD 141 (173)
T ss_pred EEEeeeeeeccCCC
Confidence 99988666653433
No 57
>TIGR00124 cit_ly_ligase [citrate (pro-3S)-lyase] ligase. ATP is cleaved to AMP and pyrophosphate during the reaction. The carboxyl end is homologous to a number of cytidyltransferases that also release pyrophosphate.
Probab=99.04 E-value=3.9e-09 Score=90.69 Aligned_cols=80 Identities=19% Similarity=0.141 Sum_probs=66.6
Q ss_pred CcEEEEecCCCccEEEEEEEecCCcccCCCCceEEEEEEEccchhcCChHHHHHHHHHHHHHHhCCcEEEEEEecCCHHH
Q 026503 125 RETFASDETHDVTVAGFVLFFPNYSTFLAKPGFYIEDIFVRECYRRKGFGRILLSAVAKQAVKMGYGRVEWIVLDWNVNA 204 (237)
Q Consensus 125 ~~~~~~~~~~~~~vvG~~~~~~~~~~~~~~~~~~i~~~~V~p~~rg~Gig~~ll~~~~~~a~~~g~~~i~~~v~~~n~~a 204 (237)
..++++.+++ ++||++.+.. -.|..++|+|+|||+|||+.||..+++.+++.|...+.+.+...|
T Consensus 31 d~~vv~~~~~--~lVg~g~l~g----------~~ik~vaV~~~~rG~Glg~~L~~~L~~~a~~~G~~~l~l~Tk~~~--- 95 (332)
T TIGR00124 31 EIFIAVYEDE--EIIGCGGIAG----------NVIKCVAIDESLRGEGLALQLMTELENLAYELGRFHLFIFTKPEY--- 95 (332)
T ss_pred CEEEEEEECC--EEEEEEEEec----------CEEEEEEEcHHHcCCCHHHHHHHHHHHHHHHcCCCEEEEEECchH---
Confidence 4566666644 9999998832 147899999999999999999999999999999999987775444
Q ss_pred HHHHHHCCCEEeceE
Q 026503 205 IKFYEEMGAKVLSEW 219 (237)
Q Consensus 205 ~~~y~k~GF~~~~~~ 219 (237)
.+||+++||+..+..
T Consensus 96 ~~fy~klGF~~i~~~ 110 (332)
T TIGR00124 96 AALFEYCGFKTLAEA 110 (332)
T ss_pred HHHHHHcCCEEeeee
Confidence 479999999999864
No 58
>TIGR01211 ELP3 histone acetyltransferase, ELP3 family. The Saccharomyces cerevisiae member YPL086C has been characterized in vitro as an N-terminal acetyltransferase for all four core histones. It is a component of the RNA polymerase II holoenzyme, designated Elp3p for Elongator Protein 3. Members of this family are found in eukaryotes and archaea. These proteins are part of the larger set of GNAT acetyltransferases.
Probab=98.97 E-value=1.1e-08 Score=92.69 Aligned_cols=98 Identities=18% Similarity=0.315 Sum_probs=73.1
Q ss_pred CCCcEEEEec-CCCccEEEEEEEecCCcc-c--CCCCceEEEEEEE-----------ccchhcCChHHHHHHHHHHHHHH
Q 026503 123 PDRETFASDE-THDVTVAGFVLFFPNYST-F--LAKPGFYIEDIFV-----------RECYRRKGFGRILLSAVAKQAVK 187 (237)
Q Consensus 123 ~~~~~~~~~~-~~~~~vvG~~~~~~~~~~-~--~~~~~~~i~~~~V-----------~p~~rg~Gig~~ll~~~~~~a~~ 187 (237)
.+...|..+. ..++.+||++.+...... . ....+..|..+.| .++|||+|+|+.||+.+++.|++
T Consensus 409 ~G~e~F~~y~~~~~~~l~G~lrlr~~~~~~~~~~~~~~a~IrelhV~G~~~~~~~~~~~~~rg~GiG~~Ll~~ae~~Ar~ 488 (522)
T TIGR01211 409 GGTEFFLSYEDPKNDILIGFLRLRFPSEPAHRKEVDATALVRELHVYGSEVPIGERGDDEWQHRGYGRRLLEEAERIAAE 488 (522)
T ss_pred CCCeEEEEEEcCCCCeEEEEEEEecCcccccccccCCCceEEEEEEeeeeccccccCChhHhCcCHHHHHHHHHHHHHHH
Confidence 3446666654 334589999999865421 1 1112344555554 49999999999999999999999
Q ss_pred hCCcEEEEEEecCCHHHHHHHHHCCCEEeceEEEEe
Q 026503 188 MGYGRVEWIVLDWNVNAIKFYEEMGAKVLSEWRICR 223 (237)
Q Consensus 188 ~g~~~i~~~v~~~n~~a~~~y~k~GF~~~~~~~~~~ 223 (237)
.|+..+.+. .|..+++||+|+||+..+++....
T Consensus 489 ~G~~~i~v~---s~~~A~~FY~klGf~~~g~ym~K~ 521 (522)
T TIGR01211 489 EGSEKILVI---SGIGVREYYRKLGYELDGPYMSKR 521 (522)
T ss_pred CCCCEEEEe---eCchHHHHHHHCCCEEEcceeEEe
Confidence 999999753 378999999999999999987654
No 59
>PF13718 GNAT_acetyltr_2: GNAT acetyltransferase 2; PDB: 2ZPA_B.
Probab=98.96 E-value=3.3e-09 Score=83.89 Aligned_cols=105 Identities=22% Similarity=0.235 Sum_probs=72.4
Q ss_pred hhhhcccCCCCCCCcEEEEecCCCccEEEEEEEecCCc--------------------------------ccCCCCceEE
Q 026503 112 RIVYLDLPLDDPDRETFASDETHDVTVAGFVLFFPNYS--------------------------------TFLAKPGFYI 159 (237)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~vvG~~~~~~~~~--------------------------------~~~~~~~~~i 159 (237)
+..+++..+++|...+|+....++.+++|.+.+..... .+....+++|
T Consensus 14 sPnDL~~LlDaP~h~l~~l~~~~~p~il~~~~v~~EG~l~~~l~~~i~~g~rRp~G~LiP~~L~~~~~~~~f~~l~g~RI 93 (196)
T PF13718_consen 14 SPNDLQLLLDAPNHRLFVLLQPGDPDILGVAQVALEGGLSKELIEAILSGGRRPKGHLIPQTLAQHFGDPEFAQLSGARI 93 (196)
T ss_dssp -HHHHHHHHH-TTEEEEEEE-SS--SEEEEEEEEEEE---HHHHHHHHTTS---SS-HHHHHHHHHSS-TTGGGSEEEEE
T ss_pred CHHHHHHHhcCCcceeehhccCCCceEEEEEEEEecCCCCHHHHHHHHhCCCCCCCCCHHHHHHHHhCCHHHHhhcceeE
Confidence 45677888899999999998754459999999874221 1223347899
Q ss_pred EEEEEccchhcCChHHHHHHHHHHHH-------------------------HHhCCcEEEEEEecCCHHHHHHHHHCCCE
Q 026503 160 EDIFVRECYRRKGFGRILLSAVAKQA-------------------------VKMGYGRVEWIVLDWNVNAIKFYEEMGAK 214 (237)
Q Consensus 160 ~~~~V~p~~rg~Gig~~ll~~~~~~a-------------------------~~~g~~~i~~~v~~~n~~a~~~y~k~GF~ 214 (237)
.+|+|+|++|++|+|+++++.+++++ +..++..+.+. .-.++...+||.|+||.
T Consensus 94 vRIAvhP~~q~~G~Gs~lL~~l~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~vDylGtS-FG~t~~Ll~FW~k~gf~ 172 (196)
T PF13718_consen 94 VRIAVHPDLQRMGYGSRLLQQLEQYAEGKIPSLSEQDKEKLPPLLSKLSDRRPPGVDYLGTS-FGATPELLKFWQKNGFV 172 (196)
T ss_dssp EEEEE-CCC-SSSHHHHHHHHHHHT-----------------------------S-SEEEEE-EE--HHHHHHHHCTT-E
T ss_pred EEEEEChhhhcCCHHHHHHHHHHHHHhhhcccccccccccccccccccccccccCCCEEEec-cCCCHHHHHHHHHCCcE
Confidence 99999999999999999999999999 35677776543 44477899999999999
Q ss_pred Eec
Q 026503 215 VLS 217 (237)
Q Consensus 215 ~~~ 217 (237)
.+.
T Consensus 173 pv~ 175 (196)
T PF13718_consen 173 PVY 175 (196)
T ss_dssp EEE
T ss_pred EEE
Confidence 874
No 60
>KOG3397 consensus Acetyltransferases [General function prediction only]
Probab=98.90 E-value=1.1e-08 Score=77.99 Aligned_cols=100 Identities=20% Similarity=0.282 Sum_probs=76.1
Q ss_pred hhhhcccCCCCCCCcEEEEecCCCccEEEEEEEecCCcccCCCCceEEEEEEEccchhcCChHHHHHHHHHHHHHHhCCc
Q 026503 112 RIVYLDLPLDDPDRETFASDETHDVTVAGFVLFFPNYSTFLAKPGFYIEDIFVRECYRRKGFGRILLSAVAKQAVKMGYG 191 (237)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~vvG~~~~~~~~~~~~~~~~~~i~~~~V~p~~rg~Gig~~ll~~~~~~a~~~g~~ 191 (237)
+..-+.+..+..-..++.. .++..+|||...+....+. ...+.++.+.|+...||+|+|+.||+.++++++..|.+
T Consensus 43 R~hSL~~ScDs~P~sL~Ll-~E~~~~VigH~rLS~i~n~---~~al~VEsVVV~k~~RG~GFGk~lMk~~E~~~R~~gf~ 118 (225)
T KOG3397|consen 43 REHSLKKSCDSPPMSLLLL-NEENDEVLGHSRLSHLPNR---DHALWVESVVVKKDQRGLGFGKFLMKSTEKWMREKGFN 118 (225)
T ss_pred hhhhhhcccCCCCeeeeee-cccccceeeeeccccCCCC---CceeEEEEEEEehhhccccHHHHHHHHHHHHHHHhhhh
Confidence 3344445555544333333 2335599999988765543 45688999999999999999999999999999999999
Q ss_pred EEEEEEecCCHHHHHHHHHCCCEEeceE
Q 026503 192 RVEWIVLDWNVNAIKFYEEMGAKVLSEW 219 (237)
Q Consensus 192 ~i~~~v~~~n~~a~~~y~k~GF~~~~~~ 219 (237)
.+++.++... +||+++||+.-.-.
T Consensus 119 ~~yLsT~DQ~----~FYe~lGYe~c~Pi 142 (225)
T KOG3397|consen 119 EAYLSTDDQC----RFYESLGYEKCDPI 142 (225)
T ss_pred heeeecccch----hhhhhhcccccCce
Confidence 9998876654 69999999976543
No 61
>KOG4135 consensus Predicted phosphoglucosamine acetyltransferase [Carbohydrate transport and metabolism]
Probab=98.81 E-value=1.7e-07 Score=69.67 Aligned_cols=64 Identities=14% Similarity=0.049 Sum_probs=58.0
Q ss_pred CceEEEEEEEccchhcCChHHHHHHHHHHHHHHh-CCcEEEEEEecCCHHHHHHHHHCCCEEece
Q 026503 155 PGFYIEDIFVRECYRRKGFGRILLSAVAKQAVKM-GYGRVEWIVLDWNVNAIKFYEEMGAKVLSE 218 (237)
Q Consensus 155 ~~~~i~~~~V~p~~rg~Gig~~ll~~~~~~a~~~-g~~~i~~~v~~~n~~a~~~y~k~GF~~~~~ 218 (237)
...++.-+.-.|..||||||+..+..++.++.+. ++.+..+.+..+|.+++++|+|++|..+..
T Consensus 106 ~~gE~EvMIAEP~~RgKG~G~eav~~ml~y~~s~l~l~Ky~vkig~~nk~sl~lFkk~~f~q~~~ 170 (185)
T KOG4135|consen 106 ITGEVEVMIAEPRGRGKGIGTEAVRAMLAYAYSVLKLDKYEVKIGMDNKPSLRLFKKFLFTQVFY 170 (185)
T ss_pred eeeeEEEEEecccccCCCccHHHHHHHHHHHHHHhhhheEEEEecCCCchHHHHHHHhhheeeee
Confidence 3567777888999999999999999999999886 899999999999999999999999998765
No 62
>PF08444 Gly_acyl_tr_C: Aralkyl acyl-CoA:amino acid N-acyltransferase, C-terminal region; InterPro: IPR013652 This entry represents mammalian-specific glycine N-acyltransferase (also called aralkyl acyl-CoA:amino acid N-acyltransferase; 2.3.1.13 from EC). Mitochondrial acyltransferases catalyse the transfer of an acyl group from acyl-CoA to the N terminus of glycine to produce N-acylglycine. These enzymes can conjugate a multitude of substrates to form a variety of N-acylglycines. The CoA derivatives of a number of aliphatic and aromatic acids, but not phenylacetyl-CoA or (indol-3-yl)acetyl-CoA, can act as donor [, ].
Probab=98.78 E-value=3.1e-08 Score=68.00 Aligned_cols=73 Identities=14% Similarity=0.112 Sum_probs=65.7
Q ss_pred CccEEEEEEEecCCcccCCCCceEEEEEEEccchhcCChHHHHHHHHHHHHHHhCCcEEEEEEecCCHHHHHHHHHCCCE
Q 026503 135 DVTVAGFVLFFPNYSTFLAKPGFYIEDIFVRECYRRKGFGRILLSAVAKQAVKMGYGRVEWIVLDWNVNAIKFYEEMGAK 214 (237)
Q Consensus 135 ~~~vvG~~~~~~~~~~~~~~~~~~i~~~~V~p~~rg~Gig~~ll~~~~~~a~~~g~~~i~~~v~~~n~~a~~~y~k~GF~ 214 (237)
+|.+|.+++... +.++..-+..|+|||||+.+.++....+.+.++|+. ++.+|...|+.++++.+++||.
T Consensus 7 eG~PVSW~lmdq---------tge~rmgyTlPeyR~~G~~~~v~~~~~~~L~~~g~P-~Y~hv~~~N~~~~r~~~~lg~~ 76 (89)
T PF08444_consen 7 EGNPVSWSLMDQ---------TGEMRMGYTLPEYRGQGLMSQVMYHLAQYLHKLGFP-FYGHVDEDNEASQRLSKSLGFI 76 (89)
T ss_pred CCCEeEEEEecc---------cccccccccCHhHhcCCHHHHHHHHHHHHHHHCCCC-eEeehHhccHHHHHHHHHCCCe
Confidence 679999998743 367778889999999999999999999999999998 6789999999999999999999
Q ss_pred Eec
Q 026503 215 VLS 217 (237)
Q Consensus 215 ~~~ 217 (237)
..-
T Consensus 77 ~~p 79 (89)
T PF08444_consen 77 FMP 79 (89)
T ss_pred ecC
Confidence 864
No 63
>PF12746 GNAT_acetyltran: GNAT acetyltransferase; PDB: 3G3S_B.
Probab=98.77 E-value=1e-07 Score=79.14 Aligned_cols=91 Identities=19% Similarity=0.193 Sum_probs=62.7
Q ss_pred EEEEecCCCccEEEEEEEecCCcccCCCCceEEEEEEEccchhcCChHHHHHHHHHHHHHHhCCcEEEEEEecCCHHHHH
Q 026503 127 TFASDETHDVTVAGFVLFFPNYSTFLAKPGFYIEDIFVRECYRRKGFGRILLSAVAKQAVKMGYGRVEWIVLDWNVNAIK 206 (237)
Q Consensus 127 ~~~~~~~~~~~vvG~~~~~~~~~~~~~~~~~~i~~~~V~p~~rg~Gig~~ll~~~~~~a~~~g~~~i~~~v~~~n~~a~~ 206 (237)
-|++..++ ++|+.|....... ..++| .+.++|+|||||+|+.+...++..|.++|+.=.+ + ..|.+|++
T Consensus 167 Gf~i~~~~--~iVs~~~s~~~~~-----~~~EI-~I~T~~~yR~kGLA~~~aa~~I~~Cl~~~l~P~W-D--c~N~~S~~ 235 (265)
T PF12746_consen 167 GFCILHDG--EIVSGCSSYFVYE-----NGIEI-DIETHPEYRGKGLATAVAAAFILECLENGLYPSW-D--CHNLASIA 235 (265)
T ss_dssp EEEEEETT--EEEEEEEEEEEET-----TEEEE-EEEE-CCCTTSSHHHHHHHHHHHHHHHTT-EEE--E--ESSHHHHH
T ss_pred EEEEEECC--EEEEEEEEEEEEC-----CEEEE-EEEECHHhhcCCHHHHHHHHHHHHHHHCCCCcCe-e--CCCHHHHH
Confidence 45555543 7776655443332 24555 8899999999999999999999999999865532 3 36999999
Q ss_pred HHHHCCCEEeceEEEEeecchH
Q 026503 207 FYEEMGAKVLSEWRICRLTGDA 228 (237)
Q Consensus 207 ~y~k~GF~~~~~~~~~~~~~~~ 228 (237)
+-+|+||+...++..|.+++..
T Consensus 236 lA~kLGf~~~~~Y~~Y~v~~~~ 257 (265)
T PF12746_consen 236 LAEKLGFHFDFEYTAYEVNNSS 257 (265)
T ss_dssp HHHHCT--EEEEEEEE------
T ss_pred HHHHcCCcccceeeeeeecccc
Confidence 9999999999999999877654
No 64
>COG2153 ElaA Predicted acyltransferase [General function prediction only]
Probab=98.75 E-value=1.3e-07 Score=70.21 Aligned_cols=88 Identities=17% Similarity=0.240 Sum_probs=67.6
Q ss_pred CCCcEEEEecCCCccEEEEEEEecCCcccCCCCceEEEEEEEccchhcCChHHHHHHHHHHHHHHhC-CcEEEEEEecCC
Q 026503 123 PDRETFASDETHDVTVAGFVLFFPNYSTFLAKPGFYIEDIFVRECYRRKGFGRILLSAVAKQAVKMG-YGRVEWIVLDWN 201 (237)
Q Consensus 123 ~~~~~~~~~~~~~~~vvG~~~~~~~~~~~~~~~~~~i~~~~V~p~~rg~Gig~~ll~~~~~~a~~~g-~~~i~~~v~~~n 201 (237)
...++++...+ |++|+++.+.+..... ....|+.++|.|++||+|+|.+||..+++.+.+.. -+.++ ....
T Consensus 48 ~~~Hl~~~~~~--g~LvAyaRLl~~~~~~---~~~~iGRV~v~~~~RG~glG~~Lm~~AL~~~~~~~p~~~v~---l~AQ 119 (155)
T COG2153 48 DTRHLLGWTPD--GELVAYARLLPPGAEY---EEVSIGRVIVSPAARGQGLGQQLMEKALETAGREWPDKPVY---LGAQ 119 (155)
T ss_pred ccceEEEEcCC--CeEEEEEecCCCCCCc---CceeeeeEEECHhhhccchhHHHHHHHHHHHHhhCCCCCeE---EehH
Confidence 33456666544 4999999997654432 22679999999999999999999999999998873 33343 4445
Q ss_pred HHHHHHHHHCCCEEece
Q 026503 202 VNAIKFYEEMGAKVLSE 218 (237)
Q Consensus 202 ~~a~~~y~k~GF~~~~~ 218 (237)
.-.+.||.+.||..+++
T Consensus 120 ahLq~fYa~~GFv~~~e 136 (155)
T COG2153 120 AHLQDFYASFGFVRVGE 136 (155)
T ss_pred HHHHHHHHHhCcEEcCc
Confidence 56789999999999886
No 65
>cd04301 NAT_SF N-Acyltransferase superfamily: Various enzymes that characteristically catalyze the transfer of an acyl group to a substrate. NAT (N-Acyltransferase) is a large superfamily of enzymes that mostly catalyze the transfer of an acyl group to a substrate and are implicated in a variety of functions, ranging from bacterial antibiotic resistance to circadian rhythms in mammals. Members include GCN5-related N-Acetyltransferases (GNAT) such as Aminoglycoside N-acetyltransferases, Histone N-acetyltransferase (HAT) enzymes, and Serotonin N-acetyltransferase, which catalyze the transfer of an acetyl group to a substrate. The kinetic mechanism of most GNATs involves the ordered formation of a ternary complex: the reaction begins with Acetyl Coenzyme A (AcCoA) binding, followed by binding of substrate, then direct transfer of the acetyl group from AcCoA to the substrate, followed by product and subsequent CoA release. Other family members include Arginine/ornithine N-succinyltransfera
Probab=98.74 E-value=1.2e-07 Score=60.06 Aligned_cols=58 Identities=34% Similarity=0.480 Sum_probs=49.6
Q ss_pred CccEEEEEEEecCCcccCCCCceEEEEEEEccchhcCChHHHHHHHHHHHHHHhCCcEEEE
Q 026503 135 DVTVAGFVLFFPNYSTFLAKPGFYIEDIFVRECYRRKGFGRILLSAVAKQAVKMGYGRVEW 195 (237)
Q Consensus 135 ~~~vvG~~~~~~~~~~~~~~~~~~i~~~~V~p~~rg~Gig~~ll~~~~~~a~~~g~~~i~~ 195 (237)
+++++|++.+..... ....+++..++|+|+|||+|+|+.++..+++++.+.|+..+.+
T Consensus 7 ~~~~ig~~~~~~~~~---~~~~~~l~~~~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~ 64 (65)
T cd04301 7 DGEIVGFASLSPDGS---GGDTAYIGDLAVLPEYRGKGIGSALLEAAEEEARERGAKRLRL 64 (65)
T ss_pred CCEEEEEEEEEecCC---CCccEEEEEEEECHHHcCcCHHHHHHHHHHHHHHHcCCcEEEe
Confidence 349999999987543 2346889899999999999999999999999999988888754
No 66
>COG3818 Predicted acetyltransferase, GNAT superfamily [General function prediction only]
Probab=98.63 E-value=5.2e-07 Score=65.74 Aligned_cols=69 Identities=22% Similarity=0.247 Sum_probs=61.6
Q ss_pred CCceEEEEEEEccchhcCChHHHHHHHHHHHHHHhCCcEEEEEEe--cCCHHHHHHHHHCCCEEeceEEEE
Q 026503 154 KPGFYIEDIFVRECYRRKGFGRILLSAVAKQAVKMGYGRVEWIVL--DWNVNAIKFYEEMGAKVLSEWRIC 222 (237)
Q Consensus 154 ~~~~~i~~~~V~p~~rg~Gig~~ll~~~~~~a~~~g~~~i~~~v~--~~n~~a~~~y~k~GF~~~~~~~~~ 222 (237)
++.+|+..+.|....||+|+|+.|.+.+..+|+..|+..+..+|. ..|+++..|...+||..+|.-..-
T Consensus 82 e~F~YvDRvVVA~~aRGrG~aRalY~Dlf~~Ae~agy~~~tCEVn~DppnpasdaFHaalGF~eVG~a~ih 152 (167)
T COG3818 82 ENFFYVDRVVVASRARGRGVARALYADLFSYAELAGYPYLTCEVNLDPPNPASDAFHAALGFHEVGQATIH 152 (167)
T ss_pred CceEEEEEEEEEecccccchHHHHHHHHHHHHHhcCCceEEEEecCCCCChHHHHHhhhcCceEccceEEe
Confidence 346899999999999999999999999999999999999877664 558999999999999999986554
No 67
>COG1444 Predicted P-loop ATPase fused to an acetyltransferase [General function prediction only]
Probab=98.59 E-value=3.8e-07 Score=84.97 Aligned_cols=103 Identities=19% Similarity=0.203 Sum_probs=79.7
Q ss_pred hhhhcccCCCCCCCcEEEEecCCCccEEEEEEEecCCcc-------------------------------cCCCCceEEE
Q 026503 112 RIVYLDLPLDDPDRETFASDETHDVTVAGFVLFFPNYST-------------------------------FLAKPGFYIE 160 (237)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~vvG~~~~~~~~~~-------------------------------~~~~~~~~i~ 160 (237)
+..++...+..|+.+++++..++ +++|+.+.+...... +..-.+++|.
T Consensus 457 sP~DL~~L~DaP~h~~~al~~~~-~~~va~~qva~EG~l~~~~i~~~~~g~r~~GnlIp~~l~~~~~~~~fa~l~G~RIv 535 (758)
T COG1444 457 SPNDLRRLLDAPHHHIFALRAPE-GKPVAVWQVAEEGGLSDELIDIWLGGRRPRGNLIPDLLAKHHRDPEFAKLVGWRIV 535 (758)
T ss_pred CHHHHHHHhcCCCCeeEEEEcCC-CceEEEEEeeccCCCcHHHHHHHhcCCCCCCcccHHHHHHhhcchhhcccceeeEE
Confidence 34566778888999999997643 588888887642211 1223378999
Q ss_pred EEEEccchhcCChHHHHHHHHHHHHHHhCCcEEEEEEecCCHHHHHHHHHCCCEEec
Q 026503 161 DIFVRECYRRKGFGRILLSAVAKQAVKMGYGRVEWIVLDWNVNAIKFYEEMGAKVLS 217 (237)
Q Consensus 161 ~~~V~p~~rg~Gig~~ll~~~~~~a~~~g~~~i~~~v~~~n~~a~~~y~k~GF~~~~ 217 (237)
.|+|+|++|++|||++||+.+.++++ +|+.++... .-.++...+||.|+||.++.
T Consensus 536 RIAvhPe~q~~GiGsrlL~~l~~~a~-~~~Dwlgvs-FG~t~~L~rFW~rnGF~pVh 590 (758)
T COG1444 536 RIAVHPELQRMGIGSRLLALLIEEAR-KGLDWLGVS-FGYTEELLRFWLRNGFVPVH 590 (758)
T ss_pred EEEeCHHHHhcCHHHHHHHHHHHHHh-cCCCEEeec-cCCCHHHHHHHHHcCeEEEE
Confidence 99999999999999999999999987 567766432 44578999999999999984
No 68
>KOG4144 consensus Arylalkylamine N-acetyltransferase [General function prediction only]
Probab=98.43 E-value=2.1e-07 Score=69.70 Aligned_cols=83 Identities=18% Similarity=0.191 Sum_probs=61.0
Q ss_pred CccEEEEEEEecCCccc----------CCCCceEEEEEEEccchhcCChHHHHHHHHHHHHHHhC-CcEEEEEEecCCHH
Q 026503 135 DVTVAGFVLFFPNYSTF----------LAKPGFYIEDIFVRECYRRKGFGRILLSAVAKQAVKMG-YGRVEWIVLDWNVN 203 (237)
Q Consensus 135 ~~~vvG~~~~~~~~~~~----------~~~~~~~i~~~~V~p~~rg~Gig~~ll~~~~~~a~~~g-~~~i~~~v~~~n~~ 203 (237)
.+.+||.++......+. .+...+.|+.+.|+|+||.+|.|..|+...++..-.+. ..++. ....++
T Consensus 70 ~~tLIghIigs~~~~E~lt~ESm~kh~s~g~ni~iHsl~Ihpa~rk~g~a~~Ll~~ylq~l~~q~i~~r~~---Li~h~p 146 (190)
T KOG4144|consen 70 EGTLIGHIIGSLWDKERLTQESMTKHRSGGHNIHIHSLAIHPAFRKQGRAPILLWRYLQHLGSQPIVRRAA---LICHDP 146 (190)
T ss_pred cccceehhhcccCcchhhhHHHHhhhhcCCcceeEEEEEecHHHHhcCcchhHHHHHHHHhhcCcccccee---eeecCC
Confidence 45899998876433321 11223889999999999999999999999888765552 23343 344567
Q ss_pred HHHHHHHCCCEEeceEE
Q 026503 204 AIKFYEEMGAKVLSEWR 220 (237)
Q Consensus 204 a~~~y~k~GF~~~~~~~ 220 (237)
.+.||+++||+.++...
T Consensus 147 LvPFYEr~gFk~vgp~~ 163 (190)
T KOG4144|consen 147 LVPFYERFGFKAVGPCA 163 (190)
T ss_pred ccchhHhcCceeecccc
Confidence 78899999999999753
No 69
>PF14542 Acetyltransf_CG: GCN5-related N-acetyl-transferase; PDB: 2H5M_A 2Q44_A 1XMT_A 2Q4Y_A 2IL4_A 2EVN_A 1R57_A.
Probab=98.32 E-value=6e-06 Score=55.95 Aligned_cols=66 Identities=17% Similarity=0.114 Sum_probs=49.6
Q ss_pred CccEEEEEEEecCCcccCCCCceEEEEEEEccchhcCChHHHHHHHHHHHHHHhCCcEEEEEEecCCHHHHHHHHHC
Q 026503 135 DVTVAGFVLFFPNYSTFLAKPGFYIEDIFVRECYRRKGFGRILLSAVAKQAVKMGYGRVEWIVLDWNVNAIKFYEEM 211 (237)
Q Consensus 135 ~~~vvG~~~~~~~~~~~~~~~~~~i~~~~V~p~~rg~Gig~~ll~~~~~~a~~~g~~~i~~~v~~~n~~a~~~y~k~ 211 (237)
+|+.+|++.+... ...+.|....|.|++||||||+.|++.++++++++|.+-+ ..-.-+.++++|+
T Consensus 7 ~g~~~a~l~Y~~~------~~~~~i~hT~V~~~~rGqGia~~L~~~~l~~a~~~~~kv~-----p~C~y~~~~~~~h 72 (78)
T PF14542_consen 7 DGEEIAELTYRED------GGVIVITHTEVPPELRGQGIAKKLVEAALDYARENGLKVV-----PTCSYVAKYFRRH 72 (78)
T ss_dssp STTEEEEEEEEES------SSEEEEEEEEE-CSSSTTTHHHHHHHHHHHHHHHTT-EEE-----ETSHHHHHHHHH-
T ss_pred CCEEEEEEEEEeC------CCEEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCEEE-----EECHHHHHHHHhC
Confidence 3589999999653 2358899999999999999999999999999999987643 2334555565553
No 70
>PF12568 DUF3749: Acetyltransferase (GNAT) domain; InterPro: IPR024612 This domain is found in uncharacterised proteins from Gammaproteobacteria, and is approximately 40 amino acids in length. It contains two completely conserved residues (D and I) that may be functionally important. Proteins having this domain are frequently annotated as acetyltransferases of the GNAT family; however there is little accompanying annotation to confirm this.; PDB: 2K5T_A.
Probab=98.24 E-value=1.5e-05 Score=58.30 Aligned_cols=86 Identities=23% Similarity=0.199 Sum_probs=59.6
Q ss_pred CCCCcEEEEecCCCccEEEEEEEecCCcccCCCCceEEEEEEEccchhcCChHHHHHHHHHHHHHHhCCcEEEEEEec--
Q 026503 122 DPDRETFASDETHDVTVAGFVLFFPNYSTFLAKPGFYIEDIFVRECYRRKGFGRILLSAVAKQAVKMGYGRVEWIVLD-- 199 (237)
Q Consensus 122 ~~~~~~~~~~~~~~~~vvG~~~~~~~~~~~~~~~~~~i~~~~V~p~~rg~Gig~~ll~~~~~~a~~~g~~~i~~~v~~-- 199 (237)
+....+|++.-|+ +++|.+.+..... ...|..++|++--|++|+|..|++.+.+.+ .++..+.+....
T Consensus 35 ~~~~~l~aArFNd--RlLgAv~v~~~~~------~~~L~~l~VRevTRrRGVG~yLlee~~rq~--p~i~~w~l~~~~~~ 104 (128)
T PF12568_consen 35 DEGHRLFAARFND--RLLGAVKVTISGQ------QAELSDLCVREVTRRRGVGLYLLEEVLRQL--PDIKHWWLADEGVE 104 (128)
T ss_dssp -SSEEEEEEEETT--EEEEEEEEEEETT------EEEEEEEEE-TT-SSSSHHHHHHHHHHHHS---S--EEEE--TT-S
T ss_pred ccCCeEEEEEech--heeeeEEEEEcCc------ceEEeeEEEeeccccccHHHHHHHHHHHHC--CCCcEEEEecCCCc
Confidence 4556688887766 9999999976533 588999999999999999999999999886 355666654332
Q ss_pred -CC-HHHHHHHHHCCCEEec
Q 026503 200 -WN-VNAIKFYEEMGAKVLS 217 (237)
Q Consensus 200 -~n-~~a~~~y~k~GF~~~~ 217 (237)
.+ ..+..|...+||...+
T Consensus 105 ~~~~~~~~~Fm~a~GF~~~~ 124 (128)
T PF12568_consen 105 PQDRAVMAAFMQACGFSAQS 124 (128)
T ss_dssp --THHHHHHHHHHHT-EE-S
T ss_pred ccchHHHHHHHHHcCccccC
Confidence 23 4566888999997654
No 71
>COG5628 Predicted acetyltransferase [General function prediction only]
Probab=98.09 E-value=2.5e-05 Score=56.10 Aligned_cols=92 Identities=22% Similarity=0.255 Sum_probs=66.6
Q ss_pred cccCCCCCCCcEEEEecCCCccEEEEEEEecCCcccCCCCceEEEEEEEccchhcCChHHHHHHHHHHHHHHhCCcEEEE
Q 026503 116 LDLPLDDPDRETFASDETHDVTVAGFVLFFPNYSTFLAKPGFYIEDIFVRECYRRKGFGRILLSAVAKQAVKMGYGRVEW 195 (237)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~vvG~~~~~~~~~~~~~~~~~~i~~~~V~p~~rg~Gig~~ll~~~~~~a~~~g~~~i~~ 195 (237)
+++...++....|....++ .+||++++-.... .+.+...-+..+++...|||+|+|++....+... ++|...+
T Consensus 28 l~~~w~~~~~~~~~~~~~~--~~igf~l~L~~~~-~~~~iD~~~~efFIi~k~~~~GvGR~aaK~If~~--~~g~w~V-- 100 (143)
T COG5628 28 LETYWRDPVREAWLFRIGG--LPVGFALVLDLAH-SPTPIDRAVAEFFIVRKHRRRGVGRAAAKAIFGS--AWGVWQV-- 100 (143)
T ss_pred hhhhhcCcccceeEEEECC--ceeeeeeeecccC-CCCcccccchheEeeehhhccchhHHHHHHHHHH--hhceEEE--
Confidence 4455566666666666644 9999998853221 2233456788999999999999999999988654 4454444
Q ss_pred EEecCCHHHHHHHHHCCCE
Q 026503 196 IVLDWNVNAIKFYEEMGAK 214 (237)
Q Consensus 196 ~v~~~n~~a~~~y~k~GF~ 214 (237)
.+...|.+|+.+|+|.-..
T Consensus 101 a~i~EN~PA~~fwK~~~~t 119 (143)
T COG5628 101 ATVRENTPARAFWKRVAET 119 (143)
T ss_pred EEeccCChhHHHHHhhhcc
Confidence 5677899999999997654
No 72
>COG2388 Predicted acetyltransferase [General function prediction only]
Probab=98.08 E-value=1.9e-05 Score=55.70 Aligned_cols=68 Identities=13% Similarity=0.276 Sum_probs=54.8
Q ss_pred CCCCCCCcEEEEecCCCccEEEEEEEecCCcccCCCCceEEEEEEEccchhcCChHHHHHHHHHHHHHHhCCcEE
Q 026503 119 PLDDPDRETFASDETHDVTVAGFVLFFPNYSTFLAKPGFYIEDIFVRECYRRKGFGRILLSAVAKQAVKMGYGRV 193 (237)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~vvG~~~~~~~~~~~~~~~~~~i~~~~V~p~~rg~Gig~~ll~~~~~~a~~~g~~~i 193 (237)
...+.....|+..+++ ..+|.+.++... ...+.|..-+|.+++||||||+.|+..+++.|++.|.+.+
T Consensus 9 ~~~~~~~~~y~~~~~G--~~~~e~~y~~~~-----~~~i~i~HT~V~d~lrGqGia~~L~~~al~~ar~~g~kii 76 (99)
T COG2388 9 EIRNGENGRYVLTDEG--EVIGEATYYDRG-----ENLIIIDHTYVPDELRGQGIAQKLVEKALEEAREAGLKII 76 (99)
T ss_pred eeeccCceEEEEecCC--cEEEEEEEecCC-----CCEEEEecCcCCHHHcCCcHHHHHHHHHHHHHHHcCCeEc
Confidence 3444556677777655 899999987654 2358888999999999999999999999999999988655
No 73
>COG4552 Eis Predicted acetyltransferase involved in intracellular survival and related acetyltransferases [General function prediction only]
Probab=97.94 E-value=2.7e-05 Score=66.11 Aligned_cols=92 Identities=17% Similarity=0.224 Sum_probs=69.9
Q ss_pred cEEEEecCCCccEEEEEEEecCCcccCC---CCceEEEEEEEccchhcCChHHHHHHHHHHHHHHhCCcEEEEEEecCCH
Q 026503 126 ETFASDETHDVTVAGFVLFFPNYSTFLA---KPGFYIEDIFVRECYRRKGFGRILLSAVAKQAVKMGYGRVEWIVLDWNV 202 (237)
Q Consensus 126 ~~~~~~~~~~~~vvG~~~~~~~~~~~~~---~~~~~i~~~~V~p~~rg~Gig~~ll~~~~~~a~~~g~~~i~~~v~~~n~ 202 (237)
..+++..+. ++++.+...+- ..|.+ -++..|..+++.|+|||+|..++|+.++++...++|+....+..
T Consensus 40 n~~vi~~nq--kl~s~L~i~~f-~~~f~~q~l~t~GIa~Vas~P~~R~~G~~~~Ll~~sLre~~~kG~p~s~L~P----- 111 (389)
T COG4552 40 NSYVIYMNQ--KLASRLHIPPF-IFWFGNQVLPTAGIAGVASAPTYRRRGALRALLAHSLREIARKGYPVSALHP----- 111 (389)
T ss_pred cceEEeehh--hhhhcccccch-heeeCCeeeeccceEEEEechhhccCcHHHHHHHHHHHHHHHcCCeeEEecc-----
Confidence 356666654 88888876542 23322 23567999999999999999999999999999999998776543
Q ss_pred HHHHHHHHCCCEEeceEEEEeec
Q 026503 203 NAIKFYEEMGAKVLSEWRICRLT 225 (237)
Q Consensus 203 ~a~~~y~k~GF~~~~~~~~~~~~ 225 (237)
.+.++|+|.||+.-+.+..+..+
T Consensus 112 ~s~~iYrKfGye~asn~~~~~~d 134 (389)
T COG4552 112 FSGGIYRKFGYEYASNYHELTFD 134 (389)
T ss_pred CchhhHhhccccccceEEEeecc
Confidence 44569999999998876655444
No 74
>COG0454 WecD Histone acetyltransferase HPA2 and related acetyltransferases [Transcription / General function prediction only]
Probab=97.84 E-value=3.2e-05 Score=54.07 Aligned_cols=44 Identities=39% Similarity=0.524 Sum_probs=40.8
Q ss_pred EEEccchhcCChHHHHHHHHHHHHHHhCCcEEEEEEecCCHHHHHHHHHCCC
Q 026503 162 IFVRECYRRKGFGRILLSAVAKQAVKMGYGRVEWIVLDWNVNAIKFYEEMGA 213 (237)
Q Consensus 162 ~~V~p~~rg~Gig~~ll~~~~~~a~~~g~~~i~~~v~~~n~~a~~~y~k~GF 213 (237)
++|+|+|||+|||+.|+..++++++..|+. .|..+..+|.++||
T Consensus 87 l~v~~~~rg~Gig~~Ll~~~~~~~~~~g~~--------~~~~~~~~~~~~~~ 130 (156)
T COG0454 87 LYVLPEYRGKGIGSALLEAALEWARKRGIS--------LNRLALEVYEKNGF 130 (156)
T ss_pred EEecchhhccchHHHHHHHHHHHHHHcCce--------ehHHHHHHHHhcCC
Confidence 999999999999999999999999987766 67899999999998
No 75
>COG3053 CitC Citrate lyase synthetase [Energy production and conversion]
Probab=97.83 E-value=0.00047 Score=57.31 Aligned_cols=80 Identities=13% Similarity=0.123 Sum_probs=62.6
Q ss_pred EEEEecCCCccEEEEEEEecCCcccCCCCceEEEEEEEccchhcCChHHHHHHHHHHHHHHhCCcEEEEEEecCCHHHHH
Q 026503 127 TFASDETHDVTVAGFVLFFPNYSTFLAKPGFYIEDIFVRECYRRKGFGRILLSAVAKQAVKMGYGRVEWIVLDWNVNAIK 206 (237)
Q Consensus 127 ~~~~~~~~~~~vvG~~~~~~~~~~~~~~~~~~i~~~~V~p~~rg~Gig~~ll~~~~~~a~~~g~~~i~~~v~~~n~~a~~ 206 (237)
.+++.-+.++++|+|..+. +-.|.-++|++.+||-|+.-+|+.++++.+.++|...+.+.+-. ...+
T Consensus 37 ~~v~~~~~~~~iiacGsia----------GnvikcvAvs~s~qGeGl~lkl~TeLin~ay~~g~~hLFiyTKp---~~~~ 103 (352)
T COG3053 37 YFVAIYRDNEEIIACGSIA----------GNVIKCVAVSESLQGEGLALKLVTELINLAYERGRTHLFIYTKP---EYAA 103 (352)
T ss_pred EEEEEEcCCCcEEEecccc----------cceeEEEEechhcccccHHHHHHHHHHHHHHHcCCceEEEEech---hHHH
Confidence 3444333346999999774 23577899999999999999999999999999998888655533 4567
Q ss_pred HHHHCCCEEeceE
Q 026503 207 FYEEMGAKVLSEW 219 (237)
Q Consensus 207 ~y~k~GF~~~~~~ 219 (237)
+|+.+||..+...
T Consensus 104 lFk~~GF~~i~~~ 116 (352)
T COG3053 104 LFKQCGFSEIASA 116 (352)
T ss_pred HHHhCCceEeecc
Confidence 9999999988643
No 76
>PF04958 AstA: Arginine N-succinyltransferase beta subunit; InterPro: IPR007041 Arginine N-succinyltransferase catalyses the transfer of succinyl-CoA to arginine to produce succinylarginine. This is the first step in arginine catabolism via the arginine succinyltransferase pathway. Six major L-arginine-degrading pathways have been described for prokaryotes []. Many bacteria arginine succinyltransferase 2.3.1.109 from EC, which is the AstA protein of the succinyltransferase (ast) pathway operon consists of five genes. In a few species, such as Pseudomonas aeruginosa, a tandem gene pair encodes alpha and beta subunits of a heterodimer that is designated arginine and ornithine succinyltransferase (AOST). This entry represents the family of proteins that make up the beta subunit of the heterodimer of Ast and AOST.; GO: 0008791 arginine N-succinyltransferase activity, 0006527 arginine catabolic process; PDB: 1YLE_A.
Probab=97.44 E-value=0.0014 Score=56.38 Aligned_cols=119 Identities=18% Similarity=0.135 Sum_probs=66.3
Q ss_pred EEEecccCCCChhHHHHHHHHHHHhhccccccccchhhHHhhhcCCCCCcceeeeeeeccCCCCCCCCCCCCCCCCCCcc
Q 026503 31 FSRIRLATPADVPHIHKLIHQMAVFEKLTHLFSATESSLAATLFNSPPFTSFTVLLLEVSPSPFAPLHSPASSPSPYSPV 110 (237)
Q Consensus 31 ~~~ir~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~e~~~~~~~~~~~~~~~~~~~~~~ 110 (237)
++.||+++.+|+++|.+|......-. ...+...+.+...+-.+
T Consensus 1 M~viRp~~~~Dl~aL~~LA~~sg~G~---TsLP~d~~~L~~rI~~S---------------------------------- 43 (342)
T PF04958_consen 1 MLVIRPARPSDLDALYALARESGPGF---TSLPPDREALAERIERS---------------------------------- 43 (342)
T ss_dssp -EEEEE--GGGHHHHHHHHHHS-TT----TTS-S-HHHHHHHHHHH----------------------------------
T ss_pred CeEEecCchhhHHHHHHHHHHcCCCc---ccCCCCHHHHHHHHHHH----------------------------------
Confidence 46899999999999999997653211 22233344444443111
Q ss_pred chhhhcccCCC--CCCCcEEEEecCCCccEEEEEEEecCCcc-------------------------------cCCCCce
Q 026503 111 DRIVYLDLPLD--DPDRETFASDETHDVTVAGFVLFFPNYST-------------------------------FLAKPGF 157 (237)
Q Consensus 111 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~vvG~~~~~~~~~~-------------------------------~~~~~~~ 157 (237)
..++-..... .+...+|+.++..+|+|||++.+...-.. ..-.-+-
T Consensus 44 -~~sFa~~~~~~~~~~~YlfVLED~~tg~vvGts~I~a~vG~~~PfY~yr~~~~vh~S~~L~v~~~~~~L~L~~d~tG~s 122 (342)
T PF04958_consen 44 -ERSFAGRDVDFPGDEGYLFVLEDTETGEVVGTSAIEAAVGLDEPFYSYRVSTLVHASRELGVRNRHETLTLSNDYTGCS 122 (342)
T ss_dssp -HHHHH-TT----S--EEEEEEEETTT--EEEEEEEESSTTSSS---EEEEEEEEEEETTTTEEEEEEEEEEE-TTTTSE
T ss_pred -HHHhhccccCCCCccceEEEEEecCCCcEEEEEeEEeccCCCCCcEEEEcCceeEcCcccCCccceeeEeeecCCCCCe
Confidence 0111111111 23345778887777899999998741110 0111246
Q ss_pred EEEEEEEccchhcCChHHHHHHHHHHHHHH
Q 026503 158 YIEDIFVRECYRRKGFGRILLSAVAKQAVK 187 (237)
Q Consensus 158 ~i~~~~V~p~~rg~Gig~~ll~~~~~~a~~ 187 (237)
+|..++++|+||+-|.|+.|-+.-.-++..
T Consensus 123 El~tLfL~p~~R~~~~G~lLSr~RfLFiA~ 152 (342)
T PF04958_consen 123 ELCTLFLDPDYRGGGNGRLLSRSRFLFIAQ 152 (342)
T ss_dssp EEEEEEE-GGGTTSHHHHHHHHHHHHHHHH
T ss_pred eeEEEEECHHHcCCchHHHHHHHHHHHHHh
Confidence 899999999999999999888776666544
No 77
>PRK10456 arginine succinyltransferase; Provisional
Probab=97.36 E-value=0.0026 Score=54.62 Aligned_cols=114 Identities=18% Similarity=0.138 Sum_probs=70.8
Q ss_pred EEecccCCCChhHHHHHHHHHHHhhccccccccchhhHHhhhcCCCCCcceeeeeeeccCCCCCCCCCCCCCCCCCCccc
Q 026503 32 SRIRLATPADVPHIHKLIHQMAVFEKLTHLFSATESSLAATLFNSPPFTSFTVLLLEVSPSPFAPLHSPASSPSPYSPVD 111 (237)
Q Consensus 32 ~~ir~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~e~~~~~~~~~~~~~~~~~~~~~~~ 111 (237)
+.||+++.+|+++|.+|......-. ...+...+.+..++-.+
T Consensus 2 ~vvRpv~~~Dl~aL~~LA~~sG~G~---TsLP~d~~~L~~rI~~S----------------------------------- 43 (344)
T PRK10456 2 MVIRPVERSDLAALMQLAGKTGGGL---TSLPANEATLAARIERA----------------------------------- 43 (344)
T ss_pred eEEecCccccHHHHHHHHHHcCCCc---ccCCCCHHHHHHHHHHH-----------------------------------
Confidence 7899999999999999986653211 22334445555444221
Q ss_pred hhhhcccCCC-CCCCcEEEEecCCCccEEEEEEEecCC-------cc------------------------cCCCCceEE
Q 026503 112 RIVYLDLPLD-DPDRETFASDETHDVTVAGFVLFFPNY-------ST------------------------FLAKPGFYI 159 (237)
Q Consensus 112 ~~~~~~~~~~-~~~~~~~~~~~~~~~~vvG~~~~~~~~-------~~------------------------~~~~~~~~i 159 (237)
..++ ..... .+...+|+.++.++|+|||++.+...- +. ..-.-.-+|
T Consensus 44 ~~sF-~~~~~~~~~~YlFVLED~~tg~vvGts~I~a~vG~~~PfY~yr~~~~vhaS~~L~v~~~~~~L~l~nd~tG~sEl 122 (344)
T PRK10456 44 LKTW-QGELPKSEQGYVFVLEDSETGTVAGICAIEVAVGLNDPWYNYRVGTLVHASKELNVYNALPTLFLSNDHTGSSEL 122 (344)
T ss_pred HHHh-cCcCCCCCccEEEEEEeCCCCcEEEEEeEEecccCCCCCEEEEcCceeecCcccCCceeeeeEEeeccCCCCcee
Confidence 0111 11111 345567888877778999999886311 00 000113578
Q ss_pred EEEEEccchhcCChHHHHHHHHHHH
Q 026503 160 EDIFVRECYRRKGFGRILLSAVAKQ 184 (237)
Q Consensus 160 ~~~~V~p~~rg~Gig~~ll~~~~~~ 184 (237)
..++++|+||+-|.|+.|-+.=.-+
T Consensus 123 ctLfl~p~~R~~~~G~LLSr~RfLF 147 (344)
T PRK10456 123 CTLFLDPDWRKEGNGYLLSKSRFMF 147 (344)
T ss_pred EEEEECHHHcCCCchhHHHHHHHHH
Confidence 8999999999999988776654444
No 78
>PF01233 NMT: Myristoyl-CoA:protein N-myristoyltransferase, N-terminal domain; InterPro: IPR022676 Myristoyl-CoA:protein N-myristoyltransferase (2.3.1.97 from EC) (Nmt) [] is the enzyme responsible for transferring a myristate group on the N-terminal glycine of a number of cellular eukaryotics and viral proteins. Nmt is a monomeric protein of about 50 to 60kDa whose sequence appears to be well conserved. The N and C-terminal domains of NMT are structurally similar, each adopting an acyl-CoA N-acyltransferase-like fold. This entry represents the N-terminal region. ; GO: 0004379 glycylpeptide N-tetradecanoyltransferase activity; PDB: 2P6G_B 2P6F_F 2P6E_A 1IIC_A 1IID_A 2NMT_A 4A33_A 3H5Z_A 4A2Z_A 2WSA_A ....
Probab=97.33 E-value=0.0052 Score=46.90 Aligned_cols=69 Identities=13% Similarity=0.176 Sum_probs=50.0
Q ss_pred EEEEecCCCccEEEEEEEecCCcccC--CCCceEEEEEEEccchhcCChHHHHHHHHHHHHHHhCCcEEEE
Q 026503 127 TFASDETHDVTVAGFVLFFPNYSTFL--AKPGFYIEDIFVRECYRRKGFGRILLSAVAKQAVKMGYGRVEW 195 (237)
Q Consensus 127 ~~~~~~~~~~~vvG~~~~~~~~~~~~--~~~~~~i~~~~V~p~~rg~Gig~~ll~~~~~~a~~~g~~~i~~ 195 (237)
.+.+....++++|||+...+..-... .....+|..+||+...|.++++-.|++++.+.+...|+.....
T Consensus 79 hiGVR~~~~~kLvgfIsaip~~irv~~~~~~~~eINFLCVhKklRskrlAPvLIkEItRRvn~~gI~qAvy 149 (162)
T PF01233_consen 79 HIGVRVKSSKKLVGFISAIPATIRVRDKVIKMVEINFLCVHKKLRSKRLAPVLIKEITRRVNLQGIWQAVY 149 (162)
T ss_dssp EEEEEETTTTEEEEEEEEEEEEEEETTEEEEEEEEEEEEE-GGGTTSSHHHHHHHHHHHHHHTTT--EEEE
T ss_pred EEEEEECCCCEEEEEEccceEEEEEeeeEeeeeeEEEEeecHhHhhcCCcHHHHHHHHHHhhhcCceeeee
Confidence 34444444679999998876432211 1246789999999999999999999999999999988776543
No 79
>PF00765 Autoind_synth: Autoinducer synthetase; InterPro: IPR001690 Bacterial species have many methods of controlling gene expression and cell growth. Regulation of gene expression in response to changes in cell density is termed quorum sensing [, ]. Quorum-sensing bacteria produce, release and respond to hormone-like molecules (autoinducers) that accumulate in the external environment as the cell population grows. Once a threshold of these molecules is reached, a signal transduction cascade is triggered that ultimately leads to behavioural changes in the bacterium []. Autoinducers are thus clearly important mediators of molecular communication. Conjugal transfer of Agrobacterium octopine-type Ti plasmids is activated by octopine, a metabolite released from plant tumours []. Octopine causes conjugal donors to secrete a pheromone, Agrobacterium autoinducer (AAI), and exogenous AAI further stimulates conjugation. The putative AAI synthase and an AAI-responsive transcriptional regulator have been found to be encoded by the Ti plasmid traI and traR genes, respectively. TraR and TraI are similar to the LuxR and LuxI regulatory proteins of Vibrio fischeri, and AAI is similar in structure to the diffusable V. fischeri autoinducer, the inducing ligand of LuxR. TraR activates target genes in the presence of AAI and also activates traR and traI themselves, creating two positive-feedback loops. TraR-AAI-mediated activation in wild-type Agrobacterium strains is enhanced by culturing on solid media, suggesting a possible role in cell density sensing []. Production of light by the marine bacterium V. fischeri and by recombinant hosts containing cloned lux genes is controlled by the density of the culture []. Density-dependent regulation of lux gene expression has been shown to require a locus consisting of the luxR and luxI genes. In these and other Gram-negative bacteria, N-(3-oxohexanoyl)-L-homoserine lactone (OHHL) acts as the autoinducer by binding to transcriptional regulatory proteins and activating them []. OHHL and related molecules, such as N-butanoyl- (BHL), N-hexanoyl- (HHL) and N-oxododecanoyl- (PAI) homoserine lactones, are produced by a family of proteins that share a high level of sequence similarity. Proteins which currently members of this family include: luxI from V. fischeri. ahyI and asaI from Aeromonas species, which synthesize BHL and whose targets are ahyR and asaR respectively. carI from Erwinia carotovora. The target of OHHL is carR which activates genes involved in the biosynthesis of carbapenem antibiotics. eagI from Enterobacter agglomerans. The target of OHHL is not yet known. esaI from Erwinia stewartii. expI from Erwinia carotovora. lasI from Pseudomonas aeruginosa, which synthesizes PAI and whose target is lasR which activates the transcription of the elastase gene. rhlI (or vsmI) from P. aeruginosa, which synthesizes BHL and HHL and whose target is rhlR. swrI from Serratia liquefaciens, which synthesizes BHL. yenI from Yersinia enterocolitica. ; GO: 0007165 signal transduction; PDB: 3P2H_A 3P2F_A 1KZF_A 1K4J_A 1RO5_A.
Probab=97.32 E-value=0.0036 Score=49.40 Aligned_cols=94 Identities=18% Similarity=0.178 Sum_probs=65.6
Q ss_pred CCCCCCCcEEEEecCCCccEEEEEEEecCCcc----------------cCCCCceEEEEEEEccchhc------CChHHH
Q 026503 119 PLDDPDRETFASDETHDVTVAGFVLFFPNYST----------------FLAKPGFYIEDIFVRECYRR------KGFGRI 176 (237)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~vvG~~~~~~~~~~----------------~~~~~~~~i~~~~V~p~~rg------~Gig~~ 176 (237)
-+.+++...+++.++ |+++|++-+.+.... ......+++..++|+++.++ .-+...
T Consensus 39 qyD~~~~~ylv~~~~--g~v~g~~RLlptt~p~ML~~~F~~ll~~~~~p~~~~vwE~SRf~v~~~~~~~~~~~~~~~~~~ 116 (182)
T PF00765_consen 39 QYDDPDAVYLVALDD--GRVVGCARLLPTTGPYMLSDVFPHLLPDGPAPRSPDVWELSRFCVDPDRRRSRAGSRSPVTME 116 (182)
T ss_dssp TTGCTT-EEEEEEET--TEEEEEEEEEETTS--HHHHCTGGGHTTS---SSTTEEEEEEEEE-HCCCHHCHSCC-THHHH
T ss_pred ecCCCCCeEEEEEEC--CEEEEEeeeccCCCcchhhhHHHHHhCCCCCCCCCcceeeeEEEEcccccccccccccHHHHH
Confidence 344555555555554 599999999863321 12245799999999998432 136778
Q ss_pred HHHHHHHHHHHhCCcEEEEEEecCCHHHHHHHHHCCCEEec
Q 026503 177 LLSAVAKQAVKMGYGRVEWIVLDWNVNAIKFYEEMGAKVLS 217 (237)
Q Consensus 177 ll~~~~~~a~~~g~~~i~~~v~~~n~~a~~~y~k~GF~~~~ 217 (237)
|+..+.++|.++|+..++..+ .....++++++||...-
T Consensus 117 L~~~~~e~a~~~gi~~~v~V~---~~~~~r~l~r~G~~~~~ 154 (182)
T PF00765_consen 117 LLLGMVEFALSNGIRHIVGVV---DPAMERILRRAGWPVRR 154 (182)
T ss_dssp HHHHHHHHHHCTT-SEEEEEE---EHHHHHHHHHCT-EEEE
T ss_pred HHHHHHHHHHHCCCCEEEEEE---ChHHHHHHHHcCCceEE
Confidence 999999999999999997655 46789999999998763
No 80
>PF13480 Acetyltransf_6: Acetyltransferase (GNAT) domain
Probab=97.30 E-value=0.0069 Score=44.81 Aligned_cols=66 Identities=20% Similarity=0.138 Sum_probs=52.9
Q ss_pred CCcEEEEecCCCccEEEEEEEecCCcccCCCCceEEEEEEEccchhcCChHHHHHHHHHHHHHHhCCcEEEEEE
Q 026503 124 DRETFASDETHDVTVAGFVLFFPNYSTFLAKPGFYIEDIFVRECYRRKGFGRILLSAVAKQAVKMGYGRVEWIV 197 (237)
Q Consensus 124 ~~~~~~~~~~~~~~vvG~~~~~~~~~~~~~~~~~~i~~~~V~p~~rg~Gig~~ll~~~~~~a~~~g~~~i~~~v 197 (237)
...++++..+ |++||+........ .++.....++|+++..++|..|+..+++++.+.|+..+.+..
T Consensus 70 ~~~l~~~~~~--g~~va~~~~~~~~~------~~~~~~~g~~~~~~~~~~~~~l~~~~i~~a~~~g~~~~d~g~ 135 (142)
T PF13480_consen 70 RLRLFVLYDG--GEPVAFALGFRHGG------TLYYWYGGYDPEYRKYSPGRLLLWEAIRWAIERGLRYFDFGG 135 (142)
T ss_pred CEEEEEEEEC--CEEEEEEEEEEECC------EEEEEEEEECHhhHhCCHHHHHHHHHHHHHHHCCCCEEEECC
Confidence 3456666664 49999998765433 467778888999999999999999999999999998886543
No 81
>TIGR03694 exosort_acyl putative PEP-CTERM/exosortase system-associated acyltransferase. Members of this protein family are restricted to bacterial species with the PEP-CTERM/exosortase system predicted to act in exopolysaccharide-associated protein targeting. PSI-BLAST and CDD reveal relationships to the acyltransferase family that includes N-acyl-L-homoserine lactone synthetase. Several members of this family may be found in a single genome. These proteins likely contribute to chemical modifications in exopolysaccharide and biofilm structural material production.
Probab=97.27 E-value=0.0072 Score=49.93 Aligned_cols=90 Identities=13% Similarity=0.065 Sum_probs=64.5
Q ss_pred CCcEEEEecCCCccEEEEEEEecCCc----------cc---------------CCCCceEEEEEEEccchhcC-------
Q 026503 124 DRETFASDETHDVTVAGFVLFFPNYS----------TF---------------LAKPGFYIEDIFVRECYRRK------- 171 (237)
Q Consensus 124 ~~~~~~~~~~~~~~vvG~~~~~~~~~----------~~---------------~~~~~~~i~~~~V~p~~rg~------- 171 (237)
....+++.+.++|++||++-+.+... .. .....+++..++|++++|++
T Consensus 54 ~~~h~l~~~~~~g~vvG~~RLl~t~~~~p~~~~p~e~~~~~~~~~~~~~~~~~~~~~i~E~SRf~V~~~~r~r~~~~~~~ 133 (241)
T TIGR03694 54 HSVHSLLRHRRTGTFVGCVRLVLPNSSDPDQPFPFEKHCSHSLDGLFLDPRRLPRSRIAEVSRLAVSKDFRRRKGEKLKP 133 (241)
T ss_pred CCcEEEEEECCCCCEEEEEEEeccccccccccccHHHHhccccchhhcCccccCCCceEEeehheECHhHhCCccccccc
Confidence 34444454333469999999976310 00 12346899999999999974
Q ss_pred -C--------------------hHHHHHHHHHHHHHHhCCcEEEEEEecCCHHHHHHHHHCCCEEe
Q 026503 172 -G--------------------FGRILLSAVAKQAVKMGYGRVEWIVLDWNVNAIKFYEEMGAKVL 216 (237)
Q Consensus 172 -G--------------------ig~~ll~~~~~~a~~~g~~~i~~~v~~~n~~a~~~y~k~GF~~~ 216 (237)
| +...|+..+.+++..+|+..++..+ .+...+++.++|+...
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~a~~~Gi~~~~~v~---~~~l~r~l~r~G~~~~ 196 (241)
T TIGR03694 134 SGVGVIETEAPFSESERRRFPHIPLGLYLGLIALSSANGITHWYAIM---EPRLARLLSRFGIQFR 196 (241)
T ss_pred ccccccccccccchhhcccCchHHHHHHHHHHHHHHHCCCcEEEEEe---CHHHHHHHHHhCCceE
Confidence 2 4567999999999999999986555 4467789999997653
No 82
>PF06852 DUF1248: Protein of unknown function (DUF1248); InterPro: IPR009658 This entry represents a conserved region within a number of proteins of unknown function that seem to be specific to Caenorhabditis elegans. Note that some proteins in the entry contain more than one copy of this region.
Probab=97.25 E-value=0.004 Score=48.88 Aligned_cols=96 Identities=17% Similarity=0.132 Sum_probs=59.9
Q ss_pred cCCCCCCCcEEEEecCCCccEEEEEEEecCC--cccCCCCceEEEEEEEccchhcCChHHHHHHHHHHHHHHhCCcEEEE
Q 026503 118 LPLDDPDRETFASDETHDVTVAGFVLFFPNY--STFLAKPGFYIEDIFVRECYRRKGFGRILLSAVAKQAVKMGYGRVEW 195 (237)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~vvG~~~~~~~~--~~~~~~~~~~i~~~~V~p~~rg~Gig~~ll~~~~~~a~~~g~~~i~~ 195 (237)
..+.+.-+..+++ ..+..++|+.+.+..-. +.-...+-..++.+++.|+|||+|+++.+-+.+.+..+..+-..
T Consensus 39 ~sf~~~Y~l~~~~-~KgT~~via~~~~~~~~~l~~~~d~pl~~~G~~w~~p~yRg~~~~kl~~~~~~~~~~~~~~N~--- 114 (181)
T PF06852_consen 39 ESFDDDYWLVLTC-LKGTDRVIATVHLIRFDPLNPSPDKPLQFIGFFWIDPEYRGKGIMKLQDDICMDELDSVDDNS--- 114 (181)
T ss_pred HhhccCeEEEEEE-EcCCCcEEEEEEEEEeccCCCCCCCCeEEEeeeeeCCcccCcchHHHHHHHHHHHhccCCCce---
Confidence 3444334444444 44456788887775321 11113556889999999999999999644444444444433332
Q ss_pred EEecCCHHHHHHH-HHCCCEEece
Q 026503 196 IVLDWNVNAIKFY-EEMGAKVLSE 218 (237)
Q Consensus 196 ~v~~~n~~a~~~y-~k~GF~~~~~ 218 (237)
+...+..+.++| +-+||...+.
T Consensus 115 -~~~~~~~~~~~w~k~~G~~~~~h 137 (181)
T PF06852_consen 115 -VAQGNVKMSNFWHKMFGFDDYGH 137 (181)
T ss_pred -eeecCHHHHHHHHHHhCCCCCcc
Confidence 245677888888 6689988887
No 83
>PRK13834 putative autoinducer synthesis protein; Provisional
Probab=97.15 E-value=0.014 Score=47.10 Aligned_cols=93 Identities=12% Similarity=0.151 Sum_probs=65.1
Q ss_pred CCCCCCcEEEEecCCCccEEEEEEEecCCcc---------------c-CCCCceEEEEEEEccchhcC---C----hHHH
Q 026503 120 LDDPDRETFASDETHDVTVAGFVLFFPNYST---------------F-LAKPGFYIEDIFVRECYRRK---G----FGRI 176 (237)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~vvG~~~~~~~~~~---------------~-~~~~~~~i~~~~V~p~~rg~---G----ig~~ 176 (237)
+.+...+.++.. +.+|++||++-+.+.... . .....+++..++|+++++.. + +...
T Consensus 48 yD~~~~~yll~~-~~~g~vvG~~RLlptt~p~ml~~~fp~l~~~~~~~~~~~v~E~SRf~V~~~~~~~~~~~~~~~~~~~ 126 (207)
T PRK13834 48 FDDLKPTYILAI-SDSGRVAGCARLLPAIGPTMLAQVFPQLLPAGRLNAHPAMIESSRFCVDTALAEGRGGGQLHEATLT 126 (207)
T ss_pred CCCCCCEEEEEE-eCCCeEEEEEecccCCCcchhhhhcHHhcCCCCCCCCCCEEEEeeeEEcccccccccccccCHHHHH
Confidence 334444444444 335699999988754221 1 13457899999999986422 2 5678
Q ss_pred HHHHHHHHHHHhCCcEEEEEEecCCHHHHHHHHHCCCEEe
Q 026503 177 LLSAVAKQAVKMGYGRVEWIVLDWNVNAIKFYEEMGAKVL 216 (237)
Q Consensus 177 ll~~~~~~a~~~g~~~i~~~v~~~n~~a~~~y~k~GF~~~ 216 (237)
|+..+.+++..+|+..++..+ .....+++.++||...
T Consensus 127 L~~~~~~~a~~~Gi~~~~~v~---~~~~~r~l~r~G~~~~ 163 (207)
T PRK13834 127 MFAGIIEWSMANGYTEIVTAT---DLRFERILARAGWPMQ 163 (207)
T ss_pred HHHHHHHHHHHCCCCEEEEEE---CHHHHHHHHHcCCCeE
Confidence 999999999999999986554 3467789999998754
No 84
>PHA00432 internal virion protein A
Probab=97.09 E-value=0.0026 Score=47.31 Aligned_cols=51 Identities=18% Similarity=0.193 Sum_probs=36.2
Q ss_pred HHHHHHHHHHhCCcEEEEEEecCCHHHHHHHHHCCCEEeceEEEEeecchHHhhh
Q 026503 178 LSAVAKQAVKMGYGRVEWIVLDWNVNAIKFYEEMGAKVLSEWRICRLTGDALDAY 232 (237)
Q Consensus 178 l~~~~~~a~~~g~~~i~~~v~~~n~~a~~~y~k~GF~~~~~~~~~~~~~~~~~~~ 232 (237)
+....+.+.+ .++.++-.|...|..+++|.+.+||+...+ |-.+|..+..|
T Consensus 82 ~~~~ld~ml~-~yp~LwNyV~~~N~~hir~Lk~lGf~f~~e---~~~~g~~F~~F 132 (137)
T PHA00432 82 IMEYRDMMLD-QYPSLWNYVWVGNKSHIRFLKSIGAVFHNE---FTGDGCQFQLF 132 (137)
T ss_pred HHHHHHHHHH-hhhhhheeeecCCHHHHHHHHHcCeeeecc---cccCCceeEEE
Confidence 3333333333 488888899999999999999999999887 33334444433
No 85
>COG3375 Uncharacterized conserved protein [Function unknown]
Probab=97.09 E-value=0.0083 Score=48.16 Aligned_cols=91 Identities=20% Similarity=0.224 Sum_probs=65.7
Q ss_pred CCCcEEEEecCCCccEEEEEEEecCCcccCCCCceEEEEEEEccchhcCChHHHHHHHHHHHHHHhCCcEEEEEEecCCH
Q 026503 123 PDRETFASDETHDVTVAGFVLFFPNYSTFLAKPGFYIEDIFVRECYRRKGFGRILLSAVAKQAVKMGYGRVEWIVLDWNV 202 (237)
Q Consensus 123 ~~~~~~~~~~~~~~~vvG~~~~~~~~~~~~~~~~~~i~~~~V~p~~rg~Gig~~ll~~~~~~a~~~g~~~i~~~v~~~n~ 202 (237)
.+..++.+..+ ++++||....++.. ..+....|-+...|.|++++.|+|-.|=..--+.+.++|+..+.+.-+..|.
T Consensus 44 ~GGlvlgAf~~-dg~lVGls~G~pg~--r~g~~y~ySH~~gV~e~~k~sglg~aLK~~Qre~a~~~G~tli~WTfDPl~a 120 (266)
T COG3375 44 HGGLVLGAFSA-DGRLVGLSYGYPGG--RGGSLYLYSHMLGVREEVKGSGLGVALKMKQRERALSMGYTLIAWTFDPLNA 120 (266)
T ss_pred cCCeEEEEEcC-CCcEEEEEeccCCc--CCCceeeeeeehhccccccccchhhhhHHHHHHHHHhcCeeeEEEecccchh
Confidence 34455556543 45999999887732 2345567778999999999999999998888899999999988766666664
Q ss_pred HHHH-HHHHCCCEEe
Q 026503 203 NAIK-FYEEMGAKVL 216 (237)
Q Consensus 203 ~a~~-~y~k~GF~~~ 216 (237)
--.+ -+.|+|....
T Consensus 121 lNA~fNi~KLGa~ar 135 (266)
T COG3375 121 LNARFNISKLGAIAR 135 (266)
T ss_pred hhhhcchhhhceeEE
Confidence 3222 2467776544
No 86
>TIGR03243 arg_catab_AOST arginine and ornithine succinyltransferase subunits. In many bacteria, the sole member of this protein family is arginine N-succinyltransferase (EC 2.3.1.109), the AstA protein of the arginine succinyltransferase (ast) pathway. However, in Pseudomonas aeruginosa and several other species, a tandem gene pair encodes alpha and beta subunits of a heterodimer that is designated arginine and ornithine succinyltransferase (AOST).
Probab=97.09 E-value=0.0059 Score=52.27 Aligned_cols=114 Identities=17% Similarity=0.165 Sum_probs=70.0
Q ss_pred EecccCCCChhHHHHHHHHHHHhhccccccccchhhHHhhhcCCCCCcceeeeeeeccCCCCCCCCCCCCCCCCCCccch
Q 026503 33 RIRLATPADVPHIHKLIHQMAVFEKLTHLFSATESSLAATLFNSPPFTSFTVLLLEVSPSPFAPLHSPASSPSPYSPVDR 112 (237)
Q Consensus 33 ~ir~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~e~~~~~~~~~~~~~~~~~~~~~~~~ 112 (237)
.||+++.+|+++|.+|......-. ...+...+.+..++-.+ .
T Consensus 1 vvRpv~~~Dl~aL~~LA~~sg~G~---TsLP~d~~~L~~rI~~S-----------------------------------~ 42 (335)
T TIGR03243 1 IVRPVRTSDLDALMQLARESGIGL---TSLPADRAALGSRIARS-----------------------------------E 42 (335)
T ss_pred CcccCccccHHHHHHHHHHcCCCc---ccCCCCHHHHHHHHHHH-----------------------------------H
Confidence 379999999999999986653211 22333445554444221 1
Q ss_pred hhhcccCCCCCCCcEEEEecCCCccEEEEEEEecCC-------cc------------------------cCCCCceEEEE
Q 026503 113 IVYLDLPLDDPDRETFASDETHDVTVAGFVLFFPNY-------ST------------------------FLAKPGFYIED 161 (237)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~vvG~~~~~~~~-------~~------------------------~~~~~~~~i~~ 161 (237)
.++-.+....+...+|+.++.++|+|||++.+...- +. ..-.-.-+|..
T Consensus 43 ~sF~~~~~~~~~~YlFVLED~~tg~vvGts~I~a~vG~~~PfY~yrv~~~vhaS~~L~v~~~~~~L~l~nd~tG~sElct 122 (335)
T TIGR03243 43 KSFAGESTRGEEGYLFVLEDTETGTVAGVSAIEAAVGLDEPFYNYRVGTLVHASRELGVYNKIPTLTLSNDLTGSSELCT 122 (335)
T ss_pred HHHhcccCCCCccEEEEEEeCCCCeEEEEEeEEecccCCCCCEEEEcCceeecCcccCCccceeeEEeeccCCCCeeeEE
Confidence 111111122345668888877778999999886311 00 00111357889
Q ss_pred EEEccchhcCChHHHHHHHHHHH
Q 026503 162 IFVRECYRRKGFGRILLSAVAKQ 184 (237)
Q Consensus 162 ~~V~p~~rg~Gig~~ll~~~~~~ 184 (237)
++++|+||+.|.|+.|-+.=.-+
T Consensus 123 LfL~p~~R~~~~G~LLSr~RfLF 145 (335)
T TIGR03243 123 LFLDPDYRKGGNGRLLSRSRFLF 145 (335)
T ss_pred EEECHHHcCCCchhhHHHHHHHH
Confidence 99999999999998776654444
No 87
>COG1243 ELP3 Histone acetyltransferase [Transcription / Chromatin structure and dynamics]
Probab=96.99 E-value=0.0014 Score=57.82 Aligned_cols=99 Identities=18% Similarity=0.266 Sum_probs=69.4
Q ss_pred cCCCCCCCcEEEEecCCC-ccEEEEEEEecCCc-cc----CCCC-----------ceEEEEEEEccchhcCChHHHHHHH
Q 026503 118 LPLDDPDRETFASDETHD-VTVAGFVLFFPNYS-TF----LAKP-----------GFYIEDIFVRECYRRKGFGRILLSA 180 (237)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~-~~vvG~~~~~~~~~-~~----~~~~-----------~~~i~~~~V~p~~rg~Gig~~ll~~ 180 (237)
....+.+..+|....+.+ +.++|+..+..... .+ .+.. ..-++. . ...||.+|+|+.||..
T Consensus 397 ~y~a~gg~e~Fls~ed~~~d~lig~lrlR~p~e~~~r~e~~~~~aivrelhvyg~~vpig~-~-~~~~QH~G~G~~L~~~ 474 (515)
T COG1243 397 EYEASGGTEIFLSYEDPKNDILIGFLRLREPSEGAHREEIDDKTAIVRELHVYGSEVPIGK-R-EDEWQHRGYGRELLEE 474 (515)
T ss_pred eeeccCCEEEEeecccchhhhhhheeeecccccchhhhhcccchhhhhhhhcccccccccc-C-cchhhcccHHHHHHHH
Confidence 455567777888765433 68999999875332 11 1100 111222 1 4689999999999999
Q ss_pred HHHHHHHhCCcEEEEEEecCCHHHHHHHHHCCCEEeceEEE
Q 026503 181 VAKQAVKMGYGRVEWIVLDWNVNAIKFYEEMGAKVLSEWRI 221 (237)
Q Consensus 181 ~~~~a~~~g~~~i~~~v~~~n~~a~~~y~k~GF~~~~~~~~ 221 (237)
+++.|++.++.+|. |.+ -.+++.+|.|+||+..|-+..
T Consensus 475 AE~ia~ee~~~ki~--viS-giG~ReYy~k~GY~~~gpYm~ 512 (515)
T COG1243 475 AERIAREEGAKKIL--VIS-GIGVREYYRKLGYELDGPYMS 512 (515)
T ss_pred HHHHHHhhccccEE--EEe-cccHHHHHHHhCccccCCccc
Confidence 99999999888873 333 458899999999999887653
No 88
>TIGR03244 arg_catab_AstA arginine N-succinyltransferase. In many bacteria, the arginine succinyltransferase (ast) pathway operon consists of five genes, including this protein, arginine N-succinyltransferase (EC 2.3.1.109). In a few species, such as Pseudomonas aeruginosa, the member of this family is encoded adjacent to a paralog, and the two polypeptides form a heterodimeric enzyme, active on both arginine and ornithine. In such species, this polypeptide may be treated as the beta subunit of an enzyme that may be named either arginine N-succinyltransferase (AST) or arginine and orthithine N-succinyltransferase (AOST).
Probab=96.95 E-value=0.0098 Score=51.03 Aligned_cols=113 Identities=19% Similarity=0.159 Sum_probs=69.1
Q ss_pred EecccCCCChhHHHHHHHHHHHhhccccccccchhhHHhhhcCCCCCcceeeeeeeccCCCCCCCCCCCCCCCCCCccch
Q 026503 33 RIRLATPADVPHIHKLIHQMAVFEKLTHLFSATESSLAATLFNSPPFTSFTVLLLEVSPSPFAPLHSPASSPSPYSPVDR 112 (237)
Q Consensus 33 ~ir~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~e~~~~~~~~~~~~~~~~~~~~~~~~ 112 (237)
.||+++.+|+++|.+|......-. ...+...+.+..++-.+ .
T Consensus 1 vvRPv~~~Dl~aL~~LA~~sg~G~---TsLP~d~~~L~~rI~~S-----------------------------------~ 42 (336)
T TIGR03244 1 IVRPVETSDLDALYQLAQSTGIGL---TSLPANEDLLSARIERA-----------------------------------E 42 (336)
T ss_pred CcccCccccHHHHHHHHHHcCCCc---ccCCCCHHHHHHHHHHH-----------------------------------H
Confidence 379999999999999987653211 22234445555444221 0
Q ss_pred hhhcccCCC-CCCCcEEEEecCCCccEEEEEEEecCC-------cc------------------------cCCCCceEEE
Q 026503 113 IVYLDLPLD-DPDRETFASDETHDVTVAGFVLFFPNY-------ST------------------------FLAKPGFYIE 160 (237)
Q Consensus 113 ~~~~~~~~~-~~~~~~~~~~~~~~~~vvG~~~~~~~~-------~~------------------------~~~~~~~~i~ 160 (237)
.++ ..... .+...+|+.++.++|+|||++.+...- +. ..-.-.-+|.
T Consensus 43 ~sF-~~~~~~~~~~YlFVLEDt~tg~vvGts~I~a~vG~~~PfY~yr~~~~vhaS~~L~v~~~~~~L~l~nd~tG~SElc 121 (336)
T TIGR03244 43 KTF-SGELTRAEQGYLFVLEDTETGTVAGVSAIEAAVGLEEPFYNYRVGTVVHASKELGIYKALETLFLSNDLTGYSELC 121 (336)
T ss_pred HHh-cCcCCCCCccEEEEEEeCCCCeEEEEEeEEecccCCCCCEEEEcCceeecCcccCCceeeeeEEeeccCCCCeeeE
Confidence 111 11111 345668888877778999999886311 00 0011135788
Q ss_pred EEEEccchhcCChHHHHHHHHHHH
Q 026503 161 DIFVRECYRRKGFGRILLSAVAKQ 184 (237)
Q Consensus 161 ~~~V~p~~rg~Gig~~ll~~~~~~ 184 (237)
.++++|+||+-|.|+.|-+.=.-+
T Consensus 122 tLfL~p~~R~~~~G~LLSr~RfLF 145 (336)
T TIGR03244 122 TLFLDPDYRKGGNGRLLSKSRFLF 145 (336)
T ss_pred EEEECHHHcCCcchhhHHHHHHHH
Confidence 999999999999988766554433
No 89
>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=96.91 E-value=0.0044 Score=55.18 Aligned_cols=137 Identities=20% Similarity=0.275 Sum_probs=92.7
Q ss_pred cceEEEecccCCCChhHHHHHHHHHHHhhccccccccchhhHHhhhcCCCCCcceeeeeeeccCCCCCCCCCCCCCCCCC
Q 026503 28 HPLFSRIRLATPADVPHIHKLIHQMAVFEKLTHLFSATESSLAATLFNSPPFTSFTVLLLEVSPSPFAPLHSPASSPSPY 107 (237)
Q Consensus 28 ~~~~~~ir~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~e~~~~~~~~~~~~~~~~~~~ 107 (237)
-.|.++++.+.+.+++.+.+|......+- .+ +--.+.+.+
T Consensus 410 Lem~l~vs~~de~~i~RIsQLtqkTNQFn-lT-tkRy~e~dV-------------------------------------- 449 (574)
T COG3882 410 LEMRLTVSKFDEVNIPRISQLTQKTNQFN-LT-TKRYNEEDV-------------------------------------- 449 (574)
T ss_pred heEEEEEeeccccCcHHHHHHhhccccee-ec-hhhhcHHHH--------------------------------------
Confidence 35789999999999999999985543211 00 001112222
Q ss_pred CccchhhhcccCCCCCCCcEEEEec---CCCccEEEEEEEecCCcccCCCCceEEEEEEEccchhcCChHHHHHHHHHHH
Q 026503 108 SPVDRIVYLDLPLDDPDRETFASDE---THDVTVAGFVLFFPNYSTFLAKPGFYIEDIFVRECYRRKGFGRILLSAVAKQ 184 (237)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~vvG~~~~~~~~~~~~~~~~~~i~~~~V~p~~rg~Gig~~ll~~~~~~ 184 (237)
.+...++...+|.+.. =+|.-+||++.+....+ .+.|..++..=..-|++|-.+|+..+++.
T Consensus 450 ---------~~~~~~~~~li~sv~l~DKfgDnGiigvviv~kk~~------~w~IDt~lmSCRVlgRkvE~~l~~~~~e~ 514 (574)
T COG3882 450 ---------RQMQEDPNFLIFSVSLKDKFGDNGIIGVVIVEKKES------EWFIDTFLMSCRVLGRKVEQRLMNSLEEQ 514 (574)
T ss_pred ---------HHHhhCCCeEEEEEEeccccccCceEEEEEEEecCC------eEEhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2233334334444321 13457999999865543 35666666555566999999999999999
Q ss_pred HHHhCCcEEEE--EEecCCHHHHHHHHHCCCEEeceE
Q 026503 185 AVKMGYGRVEW--IVLDWNVNAIKFYEEMGAKVLSEW 219 (237)
Q Consensus 185 a~~~g~~~i~~--~v~~~n~~a~~~y~k~GF~~~~~~ 219 (237)
|...|...+.. .....|.+...||+++||+..++-
T Consensus 515 A~~~gi~tir~~Y~pt~kN~pv~~FyE~mgf~l~~en 551 (574)
T COG3882 515 ALSEGINTIRGYYIPTEKNAPVSDFYERMGFKLKGEN 551 (574)
T ss_pred HHhcCcceeeeEecccccCCcHHHHHHHhcccccccc
Confidence 99999999887 446679999999999999966653
No 90
>TIGR03245 arg_AOST_alph arginine/ornithine succinyltransferase, alpha subunit. In some bacteria, including Pseudomonas aeruginosa, the astB gene (arginine N-succinyltransferase) is replaced by tandem paralogs that form a heterodimer. This heterodimer from P. aeruginosa is characterized as arginine and ornithine N-2 succinyltransferase (AOST). Members of this protein family represent the less widespread paralog, designated AruI, or arginine/ornithine succinyltransferase, alpha subunit.
Probab=96.90 E-value=0.011 Score=50.68 Aligned_cols=114 Identities=17% Similarity=0.182 Sum_probs=69.4
Q ss_pred EecccCCCChhHHHHHHHHHHHhhccccccccchhhHHhhhcCCCCCcceeeeeeeccCCCCCCCCCCCCCCCCCCccch
Q 026503 33 RIRLATPADVPHIHKLIHQMAVFEKLTHLFSATESSLAATLFNSPPFTSFTVLLLEVSPSPFAPLHSPASSPSPYSPVDR 112 (237)
Q Consensus 33 ~ir~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~e~~~~~~~~~~~~~~~~~~~~~~~~ 112 (237)
.||+++.+|+++|.+|......-. ...+...+.+..++-.+ .
T Consensus 1 viRpv~~~Dl~aL~~LA~~sG~G~---TsLP~d~~~L~~rI~~S-----------------------------------~ 42 (336)
T TIGR03245 1 IVRPSRFADLPAIERLANESAIGV---TSLPADRAKLGEKIAQS-----------------------------------E 42 (336)
T ss_pred CcccCccccHHHHHHHHHHcCCCc---ccCCCCHHHHHHHHHHH-----------------------------------H
Confidence 379999999999999986653211 22233444554444221 0
Q ss_pred hhhc-ccCCCCCCCcEEEEecCCCccEEEEEEEecCC-------cc------------------------cCCCCceEEE
Q 026503 113 IVYL-DLPLDDPDRETFASDETHDVTVAGFVLFFPNY-------ST------------------------FLAKPGFYIE 160 (237)
Q Consensus 113 ~~~~-~~~~~~~~~~~~~~~~~~~~~vvG~~~~~~~~-------~~------------------------~~~~~~~~i~ 160 (237)
.++- +.....+...+|+.++.++|+|||++.+...- +. ..-.-.-+|.
T Consensus 43 ~sF~~~~~~~~~~~YlFVLEDt~tg~vvGts~I~a~vG~~~PfY~yr~~~~vhaS~~L~v~~~~~~L~l~nd~tG~sElc 122 (336)
T TIGR03245 43 RSFAAEVSFVGEERYLFVLEDTETGKLLGTSSIVASAGYGEPFYSYRNDTLIHASRELKVNNKIHVLYMCHELTGSSLLC 122 (336)
T ss_pred HHHHhhcCCCCCccEEEEEEeCCCCcEEEEEeEEecccCCCCCEEEEcCceeecCcccCCccceeeEEeeccCCCCeeeE
Confidence 0110 01112345668888877778999999886311 00 0011135788
Q ss_pred EEEEccchhcCChHHHHHHHHHHH
Q 026503 161 DIFVRECYRRKGFGRILLSAVAKQ 184 (237)
Q Consensus 161 ~~~V~p~~rg~Gig~~ll~~~~~~ 184 (237)
.++++|+||+-|.|+.|-+.=.-+
T Consensus 123 tLfL~p~~R~~~~G~lLSr~RfLF 146 (336)
T TIGR03245 123 SFYVDPRLRKTEAAELLSRARLLF 146 (336)
T ss_pred EEEECHHHcCCCchhHHHHHHHHH
Confidence 999999999999988776654444
No 91
>PF05301 Mec-17: Touch receptor neuron protein Mec-17; InterPro: IPR007965 Mec-17 is the protein product of one of the 18 genes required for the development and function of the touch receptor neuron for gentle touch. Mec-17 is specifically required for maintaining the differentiation of the touch receptor []. This family is conserved to higher eukaryotes.; GO: 0019799 tubulin N-acetyltransferase activity
Probab=96.88 E-value=0.012 Score=42.62 Aligned_cols=74 Identities=16% Similarity=0.259 Sum_probs=49.2
Q ss_pred CccEEEEEEEecCC------c--ccCCCCceEEEEEEEccchhcCChHHHHHHHHHHHHHHhCCcEEEEEEecCCHHHHH
Q 026503 135 DVTVAGFVLFFPNY------S--TFLAKPGFYIEDIFVRECYRRKGFGRILLSAVAKQAVKMGYGRVEWIVLDWNVNAIK 206 (237)
Q Consensus 135 ~~~vvG~~~~~~~~------~--~~~~~~~~~i~~~~V~p~~rg~Gig~~ll~~~~~~a~~~g~~~i~~~v~~~n~~a~~ 206 (237)
.+.++|+.-+.... . ...-.+...|.+++|++..|++|+|++|.+.+++.- +..-..+.++.-.+..+.
T Consensus 17 ~g~viG~LKVG~K~Lfl~d~~g~~~e~~~~~cvLDFyVhes~QR~G~Gk~LF~~ML~~e---~~~p~~~a~DrPS~Kll~ 93 (120)
T PF05301_consen 17 KGAVIGFLKVGYKKLFLLDERGQHREIEPLLCVLDFYVHESRQRRGYGKRLFDHMLQEE---NVSPHQLAIDRPSPKLLS 93 (120)
T ss_pred CceEEEEEEEeeeeEEEEcCCCCEEEecccceeeeEEEEeceeccCchHHHHHHHHHHc---CCCcccceecCCcHHHHH
Confidence 46899998775311 1 111123336789999999999999999999998752 233333345666677777
Q ss_pred HHHHC
Q 026503 207 FYEEM 211 (237)
Q Consensus 207 ~y~k~ 211 (237)
|.+|+
T Consensus 94 Fl~Kh 98 (120)
T PF05301_consen 94 FLKKH 98 (120)
T ss_pred HHHHh
Confidence 77653
No 92
>PF13880 Acetyltransf_13: ESCO1/2 acetyl-transferase
Probab=96.65 E-value=0.0027 Score=41.74 Aligned_cols=28 Identities=36% Similarity=0.450 Sum_probs=25.5
Q ss_pred eEEEEEEEccchhcCChHHHHHHHHHHH
Q 026503 157 FYIEDIFVRECYRRKGFGRILLSAVAKQ 184 (237)
Q Consensus 157 ~~i~~~~V~p~~rg~Gig~~ll~~~~~~ 184 (237)
+.|..|+|+|.+|++||++.||+.+.+.
T Consensus 6 ~GI~RIWV~~~~RR~GIAt~Lld~ar~~ 33 (70)
T PF13880_consen 6 CGISRIWVSPSHRRKGIATRLLDAAREN 33 (70)
T ss_pred EEeEEEEeChhhhhhhHHHHHHHHHHHh
Confidence 5688999999999999999999988765
No 93
>PF02799 NMT_C: Myristoyl-CoA:protein N-myristoyltransferase, C-terminal domain; InterPro: IPR022677 Myristoyl-CoA:protein N-myristoyltransferase (2.3.1.97 from EC) (Nmt) [] is the enzyme responsible for transferring a myristate group on the N-terminal glycine of a number of cellular eukaryotics and viral proteins. Nmt is a monomeric protein of about 50 to 60kDa whose sequence appears to be well conserved. The N and C-terminal domains of NMT are structurally similar, each adopting an acyl-CoA N-acyltransferase-like fold. This entry represents the C-terminal region.; GO: 0004379 glycylpeptide N-tetradecanoyltransferase activity; PDB: 2P6G_B 2P6F_F 2P6E_A 1IIC_A 1IID_A 2NMT_A 2WUU_A 1IYL_B 1NMT_B 1IYK_A ....
Probab=96.45 E-value=0.088 Score=41.59 Aligned_cols=135 Identities=17% Similarity=0.163 Sum_probs=80.6
Q ss_pred ecccCCCChhHHHHHHHHHHHhhccccccccchhhHHhhhcCCCCCcceeeeeeeccCCCCCCCCCCCCCCCCCCccchh
Q 026503 34 IRLATPADVPHIHKLIHQMAVFEKLTHLFSATESSLAATLFNSPPFTSFTVLLLEVSPSPFAPLHSPASSPSPYSPVDRI 113 (237)
Q Consensus 34 ir~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (237)
+|++++.|++++.+|+++....+.... ..+.+++..++......
T Consensus 31 lR~m~~~Dv~~v~~Ll~~yl~~f~l~~--~fs~eev~Hw~lp~~~V---------------------------------- 74 (190)
T PF02799_consen 31 LRPMEEKDVPQVTKLLNKYLKKFDLAP--VFSEEEVKHWFLPRKNV---------------------------------- 74 (190)
T ss_dssp EEE--GGGHHHHHHHHHHHHTTSSEEE--E--HHHHHHHHS-BTTT----------------------------------
T ss_pred cccCchhhHHHHHHHHHHHHHhccccc--ccCHHHHHhhcccCCCe----------------------------------
Confidence 799999999999999988865443322 23456655554432111
Q ss_pred hhcccCCCCCCCcEEEEecCCCccEEEEEEEecCCcccCCC---C---ceEEEEEEEccchhcCChHHHHHHHHHHHHHH
Q 026503 114 VYLDLPLDDPDRETFASDETHDVTVAGFVLFFPNYSTFLAK---P---GFYIEDIFVRECYRRKGFGRILLSAVAKQAVK 187 (237)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~vvG~~~~~~~~~~~~~~---~---~~~i~~~~V~p~~rg~Gig~~ll~~~~~~a~~ 187 (237)
-..|+.+++ +++|-.++.++..+++..+. . ..|+ ..++...- =-..|+..++-.|++
T Consensus 75 -----------v~syVve~~-~~~ITDf~SFY~Lpstvi~~~k~~~l~aAY~-fY~~~~~~----~l~~Lm~DaLi~Ak~ 137 (190)
T PF02799_consen 75 -----------VYSYVVEDP-DGKITDFFSFYSLPSTVIGNPKHKTLKAAYS-FYYVATST----RLKELMNDALILAKN 137 (190)
T ss_dssp -----------EEEEEEEET-TSEEEEEEEEEEEEEEESSSSSSSEEEEEEE-EEEEESSS----HHHHHHHHHHHHHHH
T ss_pred -----------EEEEEEecC-CCceeeEEEEeecceeecCCCCccceeeeee-eeeeecCC----CHHHHHHHHHHHHHH
Confidence 123444443 36999999998765543222 1 1222 23333331 245688888888999
Q ss_pred hCCcEEEEEEecCCHHHHHHHHHCCCEEeceEEEEee
Q 026503 188 MGYGRVEWIVLDWNVNAIKFYEEMGAKVLSEWRICRL 224 (237)
Q Consensus 188 ~g~~~i~~~v~~~n~~a~~~y~k~GF~~~~~~~~~~~ 224 (237)
.|+.-.-.....+|. .|.+.+.|..-.-...|.+
T Consensus 138 ~gfDVFNaLd~mdN~---~fL~~lKFg~GdG~L~YYL 171 (190)
T PF02799_consen 138 EGFDVFNALDLMDNS---SFLEDLKFGPGDGNLNYYL 171 (190)
T ss_dssp TTESEEEEESTTTGG---GTTTTTT-EEEEEEEEEEE
T ss_pred cCCCEEehhhhccch---hhHhhCCccCCCCCeEEEE
Confidence 999988666666676 4899999997654433333
No 94
>TIGR03019 pepcterm_femAB FemAB-related protein, PEP-CTERM system-associated. Members of this protein family are found always as part of extended exopolysaccharide biosynthesis loci in bacteria. In nearly every case, these loci contain determinants for the processing of the PEP-CTERM proposed C-terminal protein sorting signal. This family shows remote, local sequence similarity to the FemAB protein family (see pfam02388), whose members
Probab=96.23 E-value=0.12 Score=44.68 Aligned_cols=98 Identities=14% Similarity=0.037 Sum_probs=69.0
Q ss_pred cEEEEe-cCCCccEEEEEEEecCCcccCCCCceEEEEEEEccchhcCChHHHHHHHHHHHHHHhCCcEEEEEEecCCHHH
Q 026503 126 ETFASD-ETHDVTVAGFVLFFPNYSTFLAKPGFYIEDIFVRECYRRKGFGRILLSAVAKQAVKMGYGRVEWIVLDWNVNA 204 (237)
Q Consensus 126 ~~~~~~-~~~~~~vvG~~~~~~~~~~~~~~~~~~i~~~~V~p~~rg~Gig~~ll~~~~~~a~~~g~~~i~~~v~~~n~~a 204 (237)
.++++. . +|++||.+.+..... .++....+..++++..+-+..|+..++++|.++|+..+.+.....+.+.
T Consensus 196 ~l~~a~~~--~g~~va~~l~~~~~~------~~~~~~~g~~~~~~~~~~~~lL~w~~i~~a~~~G~~~fDfG~s~~~~G~ 267 (330)
T TIGR03019 196 EVLTVRLG--DGVVASAVLSFYFRD------EVLPYYAGGLREARDVAANDLMYWELMRRACERGLRVFDFGRSKRGTGP 267 (330)
T ss_pred EEEEEEeC--CCCEEEEEEEEEeCC------EEEEEeccChHHHHhhChHHHHHHHHHHHHHHCCCcEEEcCCCCCCCcc
Confidence 345555 4 348888776644322 2332245568899999999999999999999999999988665556677
Q ss_pred HHHHHHCCCEEeceEE-EEeecchHHhh
Q 026503 205 IKFYEEMGAKVLSEWR-ICRLTGDALDA 231 (237)
Q Consensus 205 ~~~y~k~GF~~~~~~~-~~~~~~~~~~~ 231 (237)
.+|=++.||+.+.-.. .+..++..+..
T Consensus 268 ~~FK~~~G~~~~~l~~~~~~~~~~~~~~ 295 (330)
T TIGR03019 268 FKFKKNWGFEPQPLHYEYLLYEGREVPD 295 (330)
T ss_pred HHHHhcCCCeeccceEEEEccCCCcccc
Confidence 7888899999987654 44444544433
No 95
>COG3916 LasI N-acyl-L-homoserine lactone synthetase [Signal transduction mechanisms / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=96.09 E-value=0.16 Score=40.51 Aligned_cols=93 Identities=14% Similarity=0.132 Sum_probs=64.9
Q ss_pred CCCCCCcEEEEecCCCccEEEEEEEecCCcc---------------c-CCCCceEEEEEEEcc--chhcC---C-hHHHH
Q 026503 120 LDDPDRETFASDETHDVTVAGFVLFFPNYST---------------F-LAKPGFYIEDIFVRE--CYRRK---G-FGRIL 177 (237)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~vvG~~~~~~~~~~---------------~-~~~~~~~i~~~~V~p--~~rg~---G-ig~~l 177 (237)
+++.+...+++. ..+|+++||+-+-+.... . .....++...++|+. .-++. . ++..|
T Consensus 47 yD~~~t~Yll~~-~~~g~I~G~~RlLptt~P~mL~~vF~~Ll~~~~~P~~p~vwEsSRF~vd~~~a~~~~g~~~~a~~el 125 (209)
T COG3916 47 YDNLDTVYLLAL-TSDGRIVGCVRLLPTTGPYMLTDVFPALLEGGPPPSSPGVWESSRFAVDKPSARRAAGGVSPAAYEL 125 (209)
T ss_pred cCCCCceEEEEE-cCCCcEEEEEEeccCCCcchhhhhhHHHhcCCCCCCCCCeEEEeeeeeccccchhhcCCccHHHHHH
Confidence 444555555553 235699999999763221 1 122467888998886 33333 2 47789
Q ss_pred HHHHHHHHHHhCCcEEEEEEecCCHHHHHHHHHCCCEEe
Q 026503 178 LSAVAKQAVKMGYGRVEWIVLDWNVNAIKFYEEMGAKVL 216 (237)
Q Consensus 178 l~~~~~~a~~~g~~~i~~~v~~~n~~a~~~y~k~GF~~~ 216 (237)
+..+++++.++|+.+|++.+ .....+.++++||...
T Consensus 126 ~~g~ie~a~~~G~~~IvtVt---~~~meril~r~Gw~~~ 161 (209)
T COG3916 126 FAGMIEYALARGITGIVTVT---DTGMERILRRAGWPLT 161 (209)
T ss_pred HHHHHHHHHHcCCceEEEEE---chHHHHHHHHcCCCeE
Confidence 99999999999999996555 4577889999999866
No 96
>COG3138 AstA Arginine/ornithine N-succinyltransferase beta subunit [Amino acid transport and metabolism]
Probab=95.94 E-value=0.027 Score=46.90 Aligned_cols=108 Identities=20% Similarity=0.190 Sum_probs=64.1
Q ss_pred EEecccCCCChhHHHHHHHHHHHhhccccccccchhhHHhhhcCCCCCcceeeeeeeccCCCCCCCCCCCCCCCCCCccc
Q 026503 32 SRIRLATPADVPHIHKLIHQMAVFEKLTHLFSATESSLAATLFNSPPFTSFTVLLLEVSPSPFAPLHSPASSPSPYSPVD 111 (237)
Q Consensus 32 ~~ir~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~e~~~~~~~~~~~~~~~~~~~~~~~ 111 (237)
+.+||+...|+++|.++....-. --...+..++.+..++-.+
T Consensus 2 lvvRP~~~aDl~al~~LA~~sg~---G~TsLP~de~~L~~Ri~~s----------------------------------- 43 (336)
T COG3138 2 LVVRPVERADLEALMELAVKTGV---GLTSLPADEATLRARIERS----------------------------------- 43 (336)
T ss_pred cccccccccCHHHHHHHHHhcCC---CcccCCCCHHHHHHHHHHH-----------------------------------
Confidence 56899999999999999865422 1122234455555554322
Q ss_pred hhhhcccCCCCCCCcEEEEecCCCccEEEEEEEec-------CCccc------------------------CCCCceEEE
Q 026503 112 RIVYLDLPLDDPDRETFASDETHDVTVAGFVLFFP-------NYSTF------------------------LAKPGFYIE 160 (237)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~vvG~~~~~~-------~~~~~------------------------~~~~~~~i~ 160 (237)
+..+.......+...+|+.++.+.|+++|++.+.. .++.. ...-.-++.
T Consensus 44 e~sf~~~~~~ge~~Y~fVLEDsetG~VvG~saI~a~vGl~~PfYsyRv~tlvhaS~~L~v~~~i~~L~L~Nd~TG~SEl~ 123 (336)
T COG3138 44 EKSFQGELPPGEAGYLFVLEDSETGTVVGISAIEAAVGLNDPFYSYRVGTLVHASPELNVYNEIPTLFLSNDLTGNSELC 123 (336)
T ss_pred HHHHhcccCCCCccEEEEEEecCCceEEeEEEEEEeeccCCccceeeeeeeeecCccccccccceeEEEeccCcCchhhh
Confidence 11122222233455677778767789999998763 11100 000123677
Q ss_pred EEEEccchhcCChHHHH
Q 026503 161 DIFVRECYRRKGFGRIL 177 (237)
Q Consensus 161 ~~~V~p~~rg~Gig~~l 177 (237)
.++++|+||.-|-|+.|
T Consensus 124 sLFl~pd~Rkg~nG~Ll 140 (336)
T COG3138 124 TLFLDPDWRKGGNGRLL 140 (336)
T ss_pred heeecHHHhcccchhhh
Confidence 89999999976666544
No 97
>cd04264 DUF619-NAGS DUF619 domain of various N-acetylglutamate Synthases of the fungal arginine-biosynthetic pathway and urea cycle found in humans and fish. DUF619-NAGS: This family includes the DUF619 domain of various N-acetylglutamate synthases (NAGS) of the urea cycle found in humans and fish, the DUF619 domain of the NAGS of the fungal arginine-biosynthetic pathway (FABP), as well as the DUF619 domain present in C-terminal of a NAG kinase-like domain in a limited number of predicted NAGSs found in bacteria and Dictyostelium. Ureogenic NAGS is a mitochondrial enzyme catalyzing the formation of NAG from acetylcoenzyme A and L-glutamate. NAGS is an essential allosteric activator of carbamylphosphate synthase I, the first and rate limiting enzyme of the urea cycle. Domain architecture of ureogenic and fungal NAGS consists of an N-terminal NAG kinase-like domain and a C-terminal DUF619 domain. The DUF619 domain function has yet to be characterized.
Probab=95.84 E-value=0.084 Score=37.29 Aligned_cols=66 Identities=11% Similarity=0.069 Sum_probs=48.1
Q ss_pred EEEecCCCccEEEEEEEecCCcccCCCCceEEEEEEEccchhcCChHHHHHHHHHHHHHHhCCcEEEEEEecCCHH
Q 026503 128 FASDETHDVTVAGFVLFFPNYSTFLAKPGFYIEDIFVRECYRRKGFGRILLSAVAKQAVKMGYGRVEWIVLDWNVN 203 (237)
Q Consensus 128 ~~~~~~~~~~vvG~~~~~~~~~~~~~~~~~~i~~~~V~p~~rg~Gig~~ll~~~~~~a~~~g~~~i~~~v~~~n~~ 203 (237)
+.++.++ ...|++++.+... +....+|.-++|.+..||+|+|..+++.+.+. ...+...+.+.|+.
T Consensus 11 ~~~y~~e--~y~~~aIvt~~~~---~~~~~yLdKfaV~~~~~g~gvad~vf~~i~~d-----~~~L~Wrsr~~n~~ 76 (99)
T cd04264 11 HAIYLSE--GYNAAAIVTYEGV---NNGVPYLDKFAVSSSAQGEGTSDALWRRLRRD-----FPKLFWRSRKTNPI 76 (99)
T ss_pred eEEEEeC--CceEEEEEeccCC---CCCceEEEEEEEchhhhhcChHHHHHHHHHhh-----CCceEEEeCCCCcc
Confidence 3444433 6778888865432 23468999999999999999999999988754 45676677777753
No 98
>KOG2779 consensus N-myristoyl transferase [Lipid transport and metabolism]
Probab=95.79 E-value=0.2 Score=43.07 Aligned_cols=136 Identities=15% Similarity=0.150 Sum_probs=80.1
Q ss_pred ecccCCCChhHHHHHHHHHHHhhccccccccchhhHHhhhcCCCCCcceeeeeeeccCCCCCCCCCCCCCCCCCCccchh
Q 026503 34 IRLATPADVPHIHKLIHQMAVFEKLTHLFSATESSLAATLFNSPPFTSFTVLLLEVSPSPFAPLHSPASSPSPYSPVDRI 113 (237)
Q Consensus 34 ir~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~e~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (237)
+|++.+.|++++.+|+.+....+.....+ +.+++..++...... .
T Consensus 263 ~R~me~kDvp~V~~Ll~~yl~qf~la~~f--~~eev~Hwf~p~e~V--V------------------------------- 307 (421)
T KOG2779|consen 263 LREMEEKDVPAVFRLLRNYLKQFELAPVF--DEEEVEHWFLPRENV--V------------------------------- 307 (421)
T ss_pred cccccccchHHHHHHHHHHHHheeccccc--CHHHhHhhcccccce--E-------------------------------
Confidence 69999999999999998886655443322 244444433222110 1
Q ss_pred hhcccCCCCCCCcEEEEecCCCccEEEEEEEecCCcccCCCC---ceEEE--EEEEccchhcCChHHHHHHHHHHHHHHh
Q 026503 114 VYLDLPLDDPDRETFASDETHDVTVAGFVLFFPNYSTFLAKP---GFYIE--DIFVRECYRRKGFGRILLSAVAKQAVKM 188 (237)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~vvG~~~~~~~~~~~~~~~---~~~i~--~~~V~p~~rg~Gig~~ll~~~~~~a~~~ 188 (237)
..|+++. .+|++-+|+.++..+++..+++ .+... ...|..+ -=-..|+..++-.++..
T Consensus 308 ------------~syVves-p~g~ITDF~SFy~lpsTv~~~~~~ktl~aaYlyY~v~~~----t~~~~lvnDalilak~~ 370 (421)
T KOG2779|consen 308 ------------YSYVVES-PNGKITDFCSFYSLPSTVMGNPKYKTLQAAYLYYNVATS----TPLLQLVNDALILAKQK 370 (421)
T ss_pred ------------EEEEEEC-CCCcccceeeEEeccccccCCCCcceeeeeeEEEeccCC----ccHHHHHHHHHHHHHhc
Confidence 1233332 2568999999987766554432 11111 1222222 11346778888788888
Q ss_pred CCcEEEEEEecCCHHHHHHHHHCCCEEeceEEEEee
Q 026503 189 GYGRVEWIVLDWNVNAIKFYEEMGAKVLSEWRICRL 224 (237)
Q Consensus 189 g~~~i~~~v~~~n~~a~~~y~k~GF~~~~~~~~~~~ 224 (237)
|+.-.-......|. .|+++++|-.-.-...|.+
T Consensus 371 gfDVFNAld~meN~---~fl~~LkFg~GdG~l~YYL 403 (421)
T KOG2779|consen 371 GFDVFNALDLMENE---SFLKDLKFGPGDGNLQYYL 403 (421)
T ss_pred CCceeehhhhhhhh---hHHHhcCcCcCCCceeEEE
Confidence 88877554445555 4999999987754443333
No 99
>KOG2779 consensus N-myristoyl transferase [Lipid transport and metabolism]
Probab=95.33 E-value=0.046 Score=46.87 Aligned_cols=100 Identities=14% Similarity=0.180 Sum_probs=67.4
Q ss_pred cchhhhcccCCCCCCCc---EEEEecCCCccEEEEEEEecCCcccC--CCCceEEEEEEEccchhcCChHHHHHHHHHHH
Q 026503 110 VDRIVYLDLPLDDPDRE---TFASDETHDVTVAGFVLFFPNYSTFL--AKPGFYIEDIFVRECYRRKGFGRILLSAVAKQ 184 (237)
Q Consensus 110 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~vvG~~~~~~~~~~~~--~~~~~~i~~~~V~p~~rg~Gig~~ll~~~~~~ 184 (237)
.+..++++..+.-+++. .+.+...++.++|||++..+..-... ......|..+||+..-|+|+++--||+++.+.
T Consensus 116 ~Ys~eFl~Wal~~pg~~~~WHiGVRv~~s~kLVaFIsaiP~~irvrdk~vk~veINFLCVHKkLRSKRlaPvLIrEITRR 195 (421)
T KOG2779|consen 116 DYSPEFLKWALQPPGWKKEWHIGVRVKSSKKLVAFISAIPATIRVRDKVVKMVEINFLCVHKKLRSKRLAPVLIREITRR 195 (421)
T ss_pred hccHHHHHhhhcCCCCccceEEEEEEecCCceEEEEeccccEEEEccceeeeeeEEEEEEehhhhccccccHHHHHHHHH
Confidence 34566666666666543 34445555679999999876432221 23468899999999999999999999999998
Q ss_pred HHHhCCcEEE---EEEecCCHHHHHHHH
Q 026503 185 AVKMGYGRVE---WIVLDWNVNAIKFYE 209 (237)
Q Consensus 185 a~~~g~~~i~---~~v~~~n~~a~~~y~ 209 (237)
+.-.|+-... -.+...+....++|.
T Consensus 196 vnl~gIfqA~yTaGvvLp~PVstcRY~H 223 (421)
T KOG2779|consen 196 VNLEGIFQAAYTAGVVLPKPVSTCRYWH 223 (421)
T ss_pred hhhhhhhhHhhhcceeeccccchhhhhh
Confidence 7766653321 134555555555553
No 100
>PRK01305 arginyl-tRNA-protein transferase; Provisional
Probab=94.84 E-value=1.8 Score=35.67 Aligned_cols=61 Identities=11% Similarity=-0.026 Sum_probs=47.9
Q ss_pred CccEEEEEEEecCCcccCCCCceEEEEEEEccchhcCChHHHHHHHHHHHHHHhCCcEEEEEEecCC
Q 026503 135 DVTVAGFVLFFPNYSTFLAKPGFYIEDIFVRECYRRKGFGRILLSAVAKQAVKMGYGRVEWIVLDWN 201 (237)
Q Consensus 135 ~~~vvG~~~~~~~~~~~~~~~~~~i~~~~V~p~~rg~Gig~~ll~~~~~~a~~~g~~~i~~~v~~~n 201 (237)
+|++||.+.+....+ ++.-.-.+-+|++-.+++|+.++-.-+++|++.|++.+++.-...+
T Consensus 152 ~g~LiaVav~D~l~d------~lSAVY~FyDPd~~~~SLG~~~iL~qI~~ak~~gl~y~YLGY~I~~ 212 (240)
T PRK01305 152 DGKLVAVAVTDVLDD------GLSAVYTFYDPDEEHRSLGTFAILWQIELAKRLGLPYVYLGYWIKG 212 (240)
T ss_pred CCeEEEEEEEeccCC------ceeeEEEeeCCCccccCCHHHHHHHHHHHHHHcCCCeEeeeEEECC
Confidence 559999999876543 2333344569999999999999999999999999999998544444
No 101
>cd04265 DUF619-NAGS-U DUF619 domain of various N-acetylglutamate Synthases (NAGS) of the urea (U) cycle of humans and fish. This family includes the DUF619 domain of various N-acetylglutamate synthases (NAGS) of the urea cycle found in humans and fish, the DUF619 domain of the NAGS of the fungal arginine-biosynthetic pathway (FABP), as well as the DUF619 domain present in C-terminal of a NAG kinase-like domain in a limited number of predicted NAGSs found in bacteria and Dictyostelium. Ureogenic NAGS is a mitochondrial enzyme catalyzing the formation of NAG from acetylcoenzyme A and L-glutamate. NAGS is an essential allosteric activator of carbamylphosphate synthase I, the first and rate limiting enzyme of the urea cycle. Domain architecture of ureogenic and fungal NAGS consists of an N-terminal NAG kinase-like domain and a C-terminal DUF619 domain. The DUF619 domain function has yet to be characterized.
Probab=94.82 E-value=0.25 Score=34.89 Aligned_cols=57 Identities=12% Similarity=0.176 Sum_probs=41.3
Q ss_pred cEEEEEEEecCCcccCCCCceEEEEEEEccchhcCChHHHHHHHHHHHHHHhCCcEEEEEEecCCH
Q 026503 137 TVAGFVLFFPNYSTFLAKPGFYIEDIFVRECYRRKGFGRILLSAVAKQAVKMGYGRVEWIVLDWNV 202 (237)
Q Consensus 137 ~vvG~~~~~~~~~~~~~~~~~~i~~~~V~p~~rg~Gig~~ll~~~~~~a~~~g~~~i~~~v~~~n~ 202 (237)
..=|++++.+... ....+|.-++|.+..||+|+|..+++.+.+. .+.+...+.+.|+
T Consensus 19 ~y~~~aivt~~~~----~~~~yLdKfaV~~~~~g~gv~d~vf~~i~~d-----~~~L~Wrsr~~n~ 75 (99)
T cd04265 19 GYNAAAIVTNEEV----DGVPYLDKFAVSSSAQGEGTGEALWRRLRRD-----FPKLFWRSRSTNP 75 (99)
T ss_pred CCcEEEEEeccCC----CCceEEEEEEEchhhhhcChHHHHHHHHHhh-----CCceEEEeCCCCc
Confidence 4455666544321 2357999999999999999999999988754 3456666677764
No 102
>PF01853 MOZ_SAS: MOZ/SAS family; InterPro: IPR002717 Moz is a monocytic leukemia Zn_finger protein and the SAS protein from Saccharomyces cerevisiae (Baker's yeast) is involved in silencing the Hmr locus. These proteins were reported to be homologous to acetyltransferases [] but this similarity is not supported by standard sequence analysis.; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus; PDB: 3TO6_A 1MJA_A 1MJ9_A 3TO7_A 3TO9_A 1MJB_A 1FY7_A 2OZU_A 2RC4_A 2OU2_A ....
Probab=94.73 E-value=0.22 Score=39.23 Aligned_cols=50 Identities=20% Similarity=0.285 Sum_probs=36.9
Q ss_pred ccEEEEEEEecCCcccCCCCceEEEEEEEccchhcCChHHHHHHHHHHHHHHhCC
Q 026503 136 VTVAGFVLFFPNYSTFLAKPGFYIEDIFVRECYRRKGFGRILLSAVAKQAVKMGY 190 (237)
Q Consensus 136 ~~vvG~~~~~~~~~~~~~~~~~~i~~~~V~p~~rg~Gig~~ll~~~~~~a~~~g~ 190 (237)
-.+|||..=.... ....-+.-|.|.|.||++|+|+.|++..-+.++..|.
T Consensus 65 ~h~vGyFSKEk~s-----~~~~NLsCIl~lP~yQrkGyG~~LI~fSY~LSr~e~~ 114 (188)
T PF01853_consen 65 FHIVGYFSKEKES-----WDNNNLSCILTLPPYQRKGYGRFLIDFSYELSRREGK 114 (188)
T ss_dssp EEEEEEEEEESS------TT-EEESEEEE-GGGTTSSHHHHHHHHHHHHHHHTTS
T ss_pred ceeEEEEEEEecc-----cCCeeEeehhhcchhhhcchhhhhhhhHHHHhhccCc
Confidence 4689998753321 1235677889999999999999999999888877653
No 103
>KOG2535 consensus RNA polymerase II elongator complex, subunit ELP3/histone acetyltransferase [Chromatin structure and dynamics; Transcription]
Probab=94.54 E-value=0.038 Score=47.37 Aligned_cols=101 Identities=18% Similarity=0.337 Sum_probs=64.2
Q ss_pred cCCCCCCCcEEEEecCC-CccEEEEEEEecCCc-----ccCCC----CceEEEEEEE------ccchhcCChHHHHHHHH
Q 026503 118 LPLDDPDRETFASDETH-DVTVAGFVLFFPNYS-----TFLAK----PGFYIEDIFV------RECYRRKGFGRILLSAV 181 (237)
Q Consensus 118 ~~~~~~~~~~~~~~~~~-~~~vvG~~~~~~~~~-----~~~~~----~~~~i~~~~V------~p~~rg~Gig~~ll~~~ 181 (237)
....+.++..|+.++|- .+.+||...+..... ...+. +.+++.+-.| -..||.||+|..||.++
T Consensus 433 DY~ANgGWETFlSYEDpkqDILiGLLRLRkcs~~~~~~el~g~~SivRELHVYGs~vpv~~rDp~KfQHQG~GtLLmeEA 512 (554)
T KOG2535|consen 433 DYVANGGWETFLSYEDPKQDILIGLLRLRKCSKKTTRPELFGSQSIVRELHVYGSVVPVHSRDPTKFQHQGFGTLLMEEA 512 (554)
T ss_pred hhcccCChheeecccCcchhHHHHHHHHhhcccccccchhcCccchheeeeecceeeecccCCchhhhhcchhhHHHHHH
Confidence 35567778888876543 346788776543211 11111 1122222222 23799999999999999
Q ss_pred HHHHHHh-CCcEEEEEEecCCHHHHHHHHHCCCEEeceEEE
Q 026503 182 AKQAVKM-GYGRVEWIVLDWNVNAIKFYEEMGAKVLSEWRI 221 (237)
Q Consensus 182 ~~~a~~~-g~~~i~~~v~~~n~~a~~~y~k~GF~~~~~~~~ 221 (237)
++.|++. |-.+|. |.+ -.+..++|.|+||+..|-+..
T Consensus 513 ERIAr~EHgS~Kia--vIS-GVGtR~YY~klGY~LdGPYM~ 550 (554)
T KOG2535|consen 513 ERIAREEHGSGKIA--VIS-GVGTRNYYRKLGYELDGPYMV 550 (554)
T ss_pred HHHHHHhcCCCceE--EEe-ccchHHHHHhhCeeecChhHh
Confidence 9999774 777663 222 336778999999999887643
No 104
>KOG3698 consensus Hyaluronoglucosaminidase [Posttranslational modification, protein turnover, chaperones]
Probab=94.51 E-value=0.17 Score=46.26 Aligned_cols=54 Identities=15% Similarity=0.046 Sum_probs=47.4
Q ss_pred ccchhcCChHHHHHHHHHHHHHHhCCcEEEEEEecCCHHHHHHHHHCCCEEece
Q 026503 165 RECYRRKGFGRILLSAVAKQAVKMGYGRVEWIVLDWNVNAIKFYEEMGAKVLSE 218 (237)
Q Consensus 165 ~p~~rg~Gig~~ll~~~~~~a~~~g~~~i~~~v~~~n~~a~~~y~k~GF~~~~~ 218 (237)
..+.-.-|+.+.|++.++...+.+|.....+.|...+..-++||.++||.-++.
T Consensus 825 ~~~a~D~~~~k~m~~vll~tL~aNGsrGaf~~V~~dD~~~~~fys~lG~~d~~~ 878 (891)
T KOG3698|consen 825 GMDASDAHPMKKMIQVLLVTLAANGSRGAFLTVAIDDIERQKFYSELGLTDLGL 878 (891)
T ss_pred ccccccchHHHHHHHHHHHHHHhcCCcceeEEechhHHHHHHHHHHhchHHHhH
Confidence 344446689999999999999999999999999999999999999999998764
No 105
>PF13444 Acetyltransf_5: Acetyltransferase (GNAT) domain
Probab=94.16 E-value=0.19 Score=35.42 Aligned_cols=58 Identities=19% Similarity=0.179 Sum_probs=38.7
Q ss_pred CCCCCCcEEEEecCCCccEEEEEEEecCCcc----------------c--CCCCceEEEEEEEccchhcCChHHHHH
Q 026503 120 LDDPDRETFASDETHDVTVAGFVLFFPNYST----------------F--LAKPGFYIEDIFVRECYRRKGFGRILL 178 (237)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~vvG~~~~~~~~~~----------------~--~~~~~~~i~~~~V~p~~rg~Gig~~ll 178 (237)
-.|+....+++.++++ ++||++-+...... . .....+++..++|+|+||++.....|+
T Consensus 25 ~fD~~~~h~lv~~~~~-~~VGt~Rl~~~~~~~~~~~~~~~~~f~l~~~~~~~~~~~EisRl~V~~~~R~~~~~~~L~ 100 (101)
T PF13444_consen 25 EFDEHSVHLLVRDKNT-EVVGTVRLILPSPAGPLEGFYSESEFDLDPLLPLPRRVAEISRLCVHPEYRRRKVLLLLW 100 (101)
T ss_pred CCCCCccEEEEEECCC-CEEEEEEeeccccccccccCCchhhcCcchhhccCCcEEEeehheECHhHCCChHHHHHh
Confidence 3345555566655443 69999988743221 0 123578999999999999987776664
No 106
>PF04377 ATE_C: Arginine-tRNA-protein transferase, C terminus; InterPro: IPR007472 Arginine-tRNA-protein transferase catalyses the post-translational conjugation of arginine to the N terminus of a protein. In eukaryotes, this functions as part of the N terminus rule pathway of protein degradation by conjugating a destabilising amino acid to the N-terminal aspartate or glutamate of a protein, targeting the protein for ubiquitin-dependent proteolysis. N-terminal cysteine is sometimes modified []. In Saccharomyces cerevisiae, Cys20, 23, 94 and/or 95 are thought to be important for activity []. Of these, only Cys 94 appears to be completely conserved in this family. This entry represents the C-terminal region of the enzyme arginine-tRNA-protein transferase, found in both eukaryotic and prokaryotic enzymes.; GO: 0004057 arginyltransferase activity, 0016598 protein arginylation
Probab=93.96 E-value=0.41 Score=35.46 Aligned_cols=57 Identities=11% Similarity=0.007 Sum_probs=45.1
Q ss_pred CccEEEEEEEecCCcccCCCCceEEEEEEEccchhcCChHHHHHHHHHHHHHHhCCcEEEEEE
Q 026503 135 DVTVAGFVLFFPNYSTFLAKPGFYIEDIFVRECYRRKGFGRILLSAVAKQAVKMGYGRVEWIV 197 (237)
Q Consensus 135 ~~~vvG~~~~~~~~~~~~~~~~~~i~~~~V~p~~rg~Gig~~ll~~~~~~a~~~g~~~i~~~v 197 (237)
+|++||++.+....+. +.-.-.+-+|++..+++|+..+-.-+++|++.|.+.+.+.-
T Consensus 47 ~~kLiav~v~D~l~~g------lSaVY~fyDPd~~~~SlG~~~iL~eI~~a~~~~l~y~YLGY 103 (128)
T PF04377_consen 47 DGKLIAVAVVDILPDG------LSAVYTFYDPDYSKRSLGTYSILREIELARELGLPYYYLGY 103 (128)
T ss_pred CCeEEEEEEeecccch------hhheeeeeCCCccccCcHHHHHHHHHHHHHHcCCCEEeeCe
Confidence 4599999998765432 22223445999999999999999999999999999998843
No 107
>PRK14852 hypothetical protein; Provisional
Probab=93.93 E-value=0.76 Score=45.17 Aligned_cols=96 Identities=17% Similarity=0.139 Sum_probs=70.2
Q ss_pred CCCcEEEEecCCCccEEEEEEEecCCcc-----------------cCCCCceEEEEEEEccchhcCChHHHHHHHHHHHH
Q 026503 123 PDRETFASDETHDVTVAGFVLFFPNYST-----------------FLAKPGFYIEDIFVRECYRRKGFGRILLSAVAKQA 185 (237)
Q Consensus 123 ~~~~~~~~~~~~~~~vvG~~~~~~~~~~-----------------~~~~~~~~i~~~~V~p~~rg~Gig~~ll~~~~~~a 185 (237)
+.+.+|++...+ +++|...+..+... -.++..+++..+.++++.|.+-+--.+++.+..++
T Consensus 73 p~t~~~i~k~~~--~~l~T~t~~~ds~~~Gl~~D~lf~~eLd~lr~~Gr~v~EvtrLa~d~~~~~~~l~~~l~~~~~~y~ 150 (989)
T PRK14852 73 PATSVFIFKSYH--DVLCTLTHIPDSGLFGLPMDTLYKPEVDALRAQGRNVVEVGALATQYSRRWTNLMVFLAKAMFQYS 150 (989)
T ss_pred CcceEEEeccCC--cEEEEEEEecCCcccCcCHHHHHHHHHHHHHHcCCeEEeeehheechhhcccchhHHHHHHHHHHH
Confidence 445556665433 66677766554221 14556788999999998888777778888888888
Q ss_pred HHhCCcEEEEEEecCCHHHHHHHH-HCCCEEeceEEEEe
Q 026503 186 VKMGYGRVEWIVLDWNVNAIKFYE-EMGAKVLSEWRICR 223 (237)
Q Consensus 186 ~~~g~~~i~~~v~~~n~~a~~~y~-k~GF~~~~~~~~~~ 223 (237)
...++..+.+.| |+.-..||+ -+||+.+++.+.|-
T Consensus 151 ~~~~~dd~~i~V---nPkH~~FY~r~l~f~~ig~~r~~p 186 (989)
T PRK14852 151 MMSEVDDILVTV---NPKHVKFYTDIFLFKPFGEVRHYD 186 (989)
T ss_pred HHcCCCeEEEEE---CcchHHHHHHHhCCccccccccCC
Confidence 778888886666 666778997 68999999877663
No 108
>PF11124 Pho86: Inorganic phosphate transporter Pho86; InterPro: IPR024297 Pho86p is an ER protein which is produced in response to phosphate starvation. It is essential for growth when phosphate levels are limiting []. Pho86p is also involved in the regulation of Pho84p, a high-affinity phosphate transporter, which is localised to the endoplasmic reticulum (ER) in low phosphate medium. When the level of phosphate increases Pho84p is transported to the vacuole. Pho86p is required for packaging of Pho84p in to COPII vesicles [].
Probab=93.45 E-value=1.2 Score=37.66 Aligned_cols=84 Identities=19% Similarity=0.243 Sum_probs=64.2
Q ss_pred cEEEEEEEecCCcccC-CCCceEEEEEEEccchhcCChHHHHHHHHHHHHHHh---------CCc-EEEEEEecCCHHHH
Q 026503 137 TVAGFVLFFPNYSTFL-AKPGFYIEDIFVRECYRRKGFGRILLSAVAKQAVKM---------GYG-RVEWIVLDWNVNAI 205 (237)
Q Consensus 137 ~vvG~~~~~~~~~~~~-~~~~~~i~~~~V~p~~rg~Gig~~ll~~~~~~a~~~---------g~~-~i~~~v~~~n~~a~ 205 (237)
.+|+.+.+.+....-. ..-...|..+.|+.=|..-||-..|++|++-.+++. |.. .+..++.+......
T Consensus 179 tPIAiisl~~~~~~St~~~~vv~ItgigvRkVy~Ksgi~e~LidWA~~Rtr~l~~ey~k~k~~~si~ll~d~YSFD~~~~ 258 (304)
T PF11124_consen 179 TPIAIISLVPNKDQSTKENFVVKITGIGVRKVYVKSGIDEDLIDWAMLRTRQLYKEYLKGKKGCSIKLLVDVYSFDKDMK 258 (304)
T ss_pred CceEEEEeccccccCCCceEEEEEeeeEEEEEEeecChHHHHHHHHHHHHHHHHHHhccccccceEEEEEEeeeccHHHH
Confidence 8999999987654221 223467889999999999999999999997655541 111 24448889999999
Q ss_pred HHHHHCCCEEec-eEE
Q 026503 206 KFYEEMGAKVLS-EWR 220 (237)
Q Consensus 206 ~~y~k~GF~~~~-~~~ 220 (237)
++.++.||+.+. ...
T Consensus 259 k~L~~~gF~~i~ss~~ 274 (304)
T PF11124_consen 259 KTLKKKGFKKISSSFK 274 (304)
T ss_pred HHHHHCCCeeeeccee
Confidence 999999999998 443
No 109
>PHA01733 hypothetical protein
Probab=93.17 E-value=0.23 Score=37.71 Aligned_cols=78 Identities=18% Similarity=0.006 Sum_probs=47.9
Q ss_pred CccEEEEEEEecCCcccCCCCceEEEEEEEccchhcCChHHHHHHHHHHHHH-HhCCcEEEEEEecCCHHHHHHHHHCCC
Q 026503 135 DVTVAGFVLFFPNYSTFLAKPGFYIEDIFVRECYRRKGFGRILLSAVAKQAV-KMGYGRVEWIVLDWNVNAIKFYEEMGA 213 (237)
Q Consensus 135 ~~~vvG~~~~~~~~~~~~~~~~~~i~~~~V~p~~rg~Gig~~ll~~~~~~a~-~~g~~~i~~~v~~~n~~a~~~y~k~GF 213 (237)
+|+++|.+.+.++-... ......++...=.+ +-+.++.....+.. .+.|..++-.|...|..+++|.+.+||
T Consensus 55 nG~l~aI~Gv~~d~~~~----vG~pWlV~T~~v~k---~~~~f~re~r~~l~e~~~Yp~LwNyV~~~N~~hir~Lk~lGF 127 (153)
T PHA01733 55 DGSLAGVAGLVEDMGNR----VGEIWMVCTPAIEK---NPIALLRGAKWWLPKSRNYDLLWNIVDKRNLVHRKLLRKLGF 127 (153)
T ss_pred CCcEEEEecccccccCC----CCceeEEecHHhHh---CCHHHHHHHHHHHHHhccccHHHHhHhcccHHHHHHHHHcCc
Confidence 45899998886532111 11222222211111 33344444444433 447888888999999999999999999
Q ss_pred EEeceE
Q 026503 214 KVLSEW 219 (237)
Q Consensus 214 ~~~~~~ 219 (237)
+.....
T Consensus 128 ~f~~~~ 133 (153)
T PHA01733 128 KGLRYV 133 (153)
T ss_pred eeeccc
Confidence 987654
No 110
>PLN03238 probable histone acetyltransferase MYST; Provisional
Probab=91.85 E-value=0.63 Score=39.09 Aligned_cols=50 Identities=20% Similarity=0.352 Sum_probs=37.2
Q ss_pred CccEEEEEEEecCCcccCCCCceEEEEEEEccchhcCChHHHHHHHHHHHHHHhC
Q 026503 135 DVTVAGFVLFFPNYSTFLAKPGFYIEDIFVRECYRRKGFGRILLSAVAKQAVKMG 189 (237)
Q Consensus 135 ~~~vvG~~~~~~~~~~~~~~~~~~i~~~~V~p~~rg~Gig~~ll~~~~~~a~~~g 189 (237)
+..+|||..=-... ....-+.-|.|.|.||++|+|+.||+..-+..+..|
T Consensus 139 g~h~vGYFSKEK~s-----~~~nNLaCIltLPpyQrkGyG~~LI~fSYeLSr~Eg 188 (290)
T PLN03238 139 GSHIVGYFSKEKVS-----AEDYNLACILTLPPYQRKGYGKFLISFAYELSKREG 188 (290)
T ss_pred CcEEEEEeceeccc-----cCCCcEEEEEecChhhhccHhHhHHHHHhHHhhccC
Confidence 34799998653221 112346678899999999999999999988877665
No 111
>PLN03239 histone acetyltransferase; Provisional
Probab=91.83 E-value=0.5 Score=40.80 Aligned_cols=50 Identities=20% Similarity=0.288 Sum_probs=36.7
Q ss_pred CccEEEEEEEecCCcccCCCCceEEEEEEEccchhcCChHHHHHHHHHHHHHHhC
Q 026503 135 DVTVAGFVLFFPNYSTFLAKPGFYIEDIFVRECYRRKGFGRILLSAVAKQAVKMG 189 (237)
Q Consensus 135 ~~~vvG~~~~~~~~~~~~~~~~~~i~~~~V~p~~rg~Gig~~ll~~~~~~a~~~g 189 (237)
+-.+|||..=-.. .....-+.-|.|.|.||++|+|+.||+..-+..+..|
T Consensus 197 g~h~vGYFSKEK~-----s~~~~NLaCIltLPpyQrkGyG~lLI~fSYeLSr~Eg 246 (351)
T PLN03239 197 GFHPVGYYSKEKY-----SDVGYNLACILTFPAHQRKGYGRFLIAFSYELSKKEE 246 (351)
T ss_pred ceEEEEEeeeccc-----CCCCCceEEEEecChhhhcchhhhhHhhhhHhhhhcC
Confidence 3478888864321 1112346788899999999999999999988876655
No 112
>PTZ00064 histone acetyltransferase; Provisional
Probab=91.39 E-value=0.47 Score=42.76 Aligned_cols=50 Identities=24% Similarity=0.476 Sum_probs=37.0
Q ss_pred CccEEEEEEEecCCcccCCCCceEEEEEEEccchhcCChHHHHHHHHHHHHHHhC
Q 026503 135 DVTVAGFVLFFPNYSTFLAKPGFYIEDIFVRECYRRKGFGRILLSAVAKQAVKMG 189 (237)
Q Consensus 135 ~~~vvG~~~~~~~~~~~~~~~~~~i~~~~V~p~~rg~Gig~~ll~~~~~~a~~~g 189 (237)
+-.+|||..=-.. .....-+.-|.|.|.||++|+|+.||+..-+..+..|
T Consensus 368 G~HiVGYFSKEK~-----S~~~nNLACILtLPpyQRKGYGklLIdfSYeLSrrEg 417 (552)
T PTZ00064 368 GCHIVGYFSKEKV-----SLLHYNLACILTLPCYQRKGYGKLLVDLSYKLSLKEG 417 (552)
T ss_pred CcEEEEEeccccc-----CcccCceEEEEecchhhhcchhhhhhhhhhhhhhhcC
Confidence 3479998864321 1122356788899999999999999999988877655
No 113
>PF11039 DUF2824: Protein of unknown function (DUF2824); InterPro: IPR022568 This family of proteins has no known function. Members of the family are found in P22-like viruses and bacteria. Some of the phage members have been annotated as head assembly proteins, but this has not been confirmed.
Probab=90.83 E-value=5.3 Score=29.61 Aligned_cols=104 Identities=15% Similarity=0.158 Sum_probs=65.9
Q ss_pred CCCCcEEEEecCCCccEEEEEEEecCCcccCCCCceEEEEEEEccchhcCChHHHHHHHHHHHHHHh-CCcEEEEEEecC
Q 026503 122 DPDRETFASDETHDVTVAGFVLFFPNYSTFLAKPGFYIEDIFVRECYRRKGFGRILLSAVAKQAVKM-GYGRVEWIVLDW 200 (237)
Q Consensus 122 ~~~~~~~~~~~~~~~~vvG~~~~~~~~~~~~~~~~~~i~~~~V~p~~rg~Gig~~ll~~~~~~a~~~-g~~~i~~~v~~~ 200 (237)
+++...+-+.+ .+.++|++.+..-.+ ..+..+-++ +|++|| ++...-....+|.-++ ....+...+...
T Consensus 35 K~~~~Y~gVye--g~~l~Gi~~v~~i~~-----~~vecHa~y-~P~fRG--~a~~~~~~F~kwlL~Ns~f~~vit~vp~k 104 (151)
T PF11039_consen 35 KPDQLYLGVYE--GGQLGGIVYVEEIQP-----SVVECHAMY-DPGFRG--YALEIGRLFCKWLLENSPFQNVITFVPDK 104 (151)
T ss_pred cCccEEEEEEe--ceEEEEEEEEEEEee-----eeEEEEeee-ccccch--hHHHHHHHHHHHHhcCCceeEEEEecccc
Confidence 34445555555 448889888753322 134454555 999998 6655555555665444 566666666666
Q ss_pred CHHHHHHHHHCCCEEece----------EEEEeecchHHhhhhcc
Q 026503 201 NVNAIKFYEEMGAKVLSE----------WRICRLTGDALDAYGNA 235 (237)
Q Consensus 201 n~~a~~~y~k~GF~~~~~----------~~~~~~~~~~~~~~~~~ 235 (237)
-+-.+-+.+=+|.+.+|. ..+|++..+.+.++++-
T Consensus 105 t~~Grvic~llg~~RVG~id~~~~g~~~vTlYq~tReel~e~~n~ 149 (151)
T PF11039_consen 105 TRYGRVICRLLGARRVGHIDDYFKGVDGVTLYQLTREELEEFLNH 149 (151)
T ss_pred cccchhHhhhhCCceeeeHHHHhcCCCceEEEEccHHHHHHHHhc
Confidence 666677778888888874 45677777777666653
No 114
>COG2401 ABC-type ATPase fused to a predicted acetyltransferase domain [General function prediction only]
Probab=90.76 E-value=0.12 Score=45.88 Aligned_cols=63 Identities=19% Similarity=0.252 Sum_probs=44.6
Q ss_pred ceEEEEEEEccchhcCChHHHHHHHHHHHHHHhCCcEEEEE-----EecCCHHHHHHHHHCCCEEece
Q 026503 156 GFYIEDIFVRECYRRKGFGRILLSAVAKQAVKMGYGRVEWI-----VLDWNVNAIKFYEEMGAKVLSE 218 (237)
Q Consensus 156 ~~~i~~~~V~p~~rg~Gig~~ll~~~~~~a~~~g~~~i~~~-----v~~~n~~a~~~y~k~GF~~~~~ 218 (237)
...|..+.|+|+||+-|||..-+..+.+|..++-.+-.... +......--.|+++.||+..-+
T Consensus 241 aariarvvvhpdyr~dglg~~sv~~a~ewI~eRriPEmr~rkHlvetiaqmarynpffe~~gfkylwd 308 (593)
T COG2401 241 AARIARVVVHPDYRADGLGQLSVIAALEWIIERRIPEMRPRKHLVETIAQMARYNPFFEKVGFKYLWD 308 (593)
T ss_pred hhheeEEEeccccccCccchhHHHHHHHHHHHhhChhhhhhhhHHHHHHHHHhcCchhhhhceeeeee
Confidence 46899999999999999999999999999887754433211 1111111115899999998643
No 115
>KOG4601 consensus Uncharacterized conserved protein [Function unknown]
Probab=90.71 E-value=1.1 Score=36.40 Aligned_cols=48 Identities=21% Similarity=0.293 Sum_probs=34.9
Q ss_pred ccEEEEEEEecCC--------cccCCCCceEEEEEEEccchhcCChHHHHHHHHHHH
Q 026503 136 VTVAGFVLFFPNY--------STFLAKPGFYIEDIFVRECYRRKGFGRILLSAVAKQ 184 (237)
Q Consensus 136 ~~vvG~~~~~~~~--------~~~~~~~~~~i~~~~V~p~~rg~Gig~~ll~~~~~~ 184 (237)
+.+.|++-+.... +.+. .....|.+|+|+++-|+.|.|..|++++++.
T Consensus 81 s~l~GllKVG~KkLfl~D~~~~~ye-~e~lcILDFyVheS~QR~G~G~~lfdyMl~k 136 (264)
T KOG4601|consen 81 SILKGLLKVGYKKLFLTDNEQNQYE-EEALCILDFYVHESEQRSGNGFKLFDYMLKK 136 (264)
T ss_pred hheeeeehccceeEEEeccHhhhhc-cCCceEEEEEeehhhhhcCchHHHHHHHHHh
Confidence 4688887654211 1112 2356788999999999999999999999863
No 116
>COG5092 NMT1 N-myristoyl transferase [Lipid metabolism]
Probab=90.70 E-value=2.1 Score=36.47 Aligned_cols=66 Identities=12% Similarity=0.170 Sum_probs=49.5
Q ss_pred EEEEecCCCccEEEEEEEecCCcccC--CCCceEEEEEEEccchhcCChHHHHHHHHHHHHHHhCCcE
Q 026503 127 TFASDETHDVTVAGFVLFFPNYSTFL--AKPGFYIEDIFVRECYRRKGFGRILLSAVAKQAVKMGYGR 192 (237)
Q Consensus 127 ~~~~~~~~~~~vvG~~~~~~~~~~~~--~~~~~~i~~~~V~p~~rg~Gig~~ll~~~~~~a~~~g~~~ 192 (237)
.+.....+.+++|||+...+..-... ......+..+||+.+-|++.+.-.|+.++.+.+...|+.+
T Consensus 134 higvRvk~t~klVaFIsa~p~~v~vRgK~~~~~evNFLCihk~lRsKRltPvLIkEiTRR~n~~~iw~ 201 (451)
T COG5092 134 HIGVRVKGTQKLVAFISAKPHLVSVRGKRSSVLEVNFLCIHKELRSKRLTPVLIKEITRRANVDGIWR 201 (451)
T ss_pred EEEEEEcccceeEEEEecceeEEEEcccccccceEEEEEEehhhhhCccchHHHHHHHHhhhhhhhHH
Confidence 34445555679999998765432222 2346889999999999999999999999999887766544
No 117
>PLN00104 MYST -like histone acetyltransferase; Provisional
Probab=89.56 E-value=0.5 Score=42.28 Aligned_cols=50 Identities=18% Similarity=0.367 Sum_probs=36.6
Q ss_pred CccEEEEEEEecCCcccCCCCceEEEEEEEccchhcCChHHHHHHHHHHHHHHhC
Q 026503 135 DVTVAGFVLFFPNYSTFLAKPGFYIEDIFVRECYRRKGFGRILLSAVAKQAVKMG 189 (237)
Q Consensus 135 ~~~vvG~~~~~~~~~~~~~~~~~~i~~~~V~p~~rg~Gig~~ll~~~~~~a~~~g 189 (237)
+-.+|||..=-... ....-+.-|.|.|.||++|+|+.||+..-+..+..|
T Consensus 290 g~h~vGyFSKEk~s-----~~~~NLaCIltlP~yQrkGyG~~LI~~SYeLSr~eg 339 (450)
T PLN00104 290 GCHMVGYFSKEKHS-----EEDYNLACILTLPPYQRKGYGKFLIAFSYELSKREG 339 (450)
T ss_pred CcEEEEEecccccC-----cCCCceEEEEecchhhhcchhheehhheehhhhccC
Confidence 34899998643221 122356788899999999999999998887766554
No 118
>KOG2696 consensus Histone acetyltransferase type b catalytic subunit [Chromatin structure and dynamics]
Probab=89.31 E-value=1.9 Score=37.44 Aligned_cols=81 Identities=19% Similarity=0.184 Sum_probs=47.3
Q ss_pred CCCCCCcEEEEecCC--C-cc---EEEEEEEecCCcccCCCCceEEEEEEEccchhcCChHHHHHHHHHHHHHHhCCcEE
Q 026503 120 LDDPDRETFASDETH--D-VT---VAGFVLFFPNYSTFLAKPGFYIEDIFVRECYRRKGFGRILLSAVAKQAVKMGYGRV 193 (237)
Q Consensus 120 ~~~~~~~~~~~~~~~--~-~~---vvG~~~~~~~~~~~~~~~~~~i~~~~V~p~~rg~Gig~~ll~~~~~~a~~~g~~~i 193 (237)
..++.++++...... + .. ++|+..++..+..... ....|.++-+.|.||++|+|+.|+..+....... -.-+
T Consensus 176 ~tde~w~~~lv~EK~~~d~~~ly~~~gy~tiyk~y~yid~-~R~RiSQmlilpPfq~~Glgs~l~E~i~r~~~~~-p~v~ 253 (403)
T KOG2696|consen 176 NTDECWLIYLVYEKKEEDGDTLYAYVGYYTIYKFYEYIDR-IRPRISQMLILPPFQGKGLGSQLYEAIARDYLEE-PTVL 253 (403)
T ss_pred cCCCceEEEEeeeecccCCceeEeeeeeEEEeehhhhhhh-hhhhhheeEEeccccCCchHHHHHHHHHHhhccC-Ccee
Confidence 445666666664322 2 23 4455444432222222 3356889999999999999999999998543332 2334
Q ss_pred EEEEecCCH
Q 026503 194 EWIVLDWNV 202 (237)
Q Consensus 194 ~~~v~~~n~ 202 (237)
.+.|..-++
T Consensus 254 DiTVEdPse 262 (403)
T KOG2696|consen 254 DITVEDPSE 262 (403)
T ss_pred EEEecCchH
Confidence 444544443
No 119
>PF11090 DUF2833: Protein of unknown function (DUF2833); InterPro: IPR020335 This entry contains proteins with no known function.
Probab=89.09 E-value=1.5 Score=29.95 Aligned_cols=36 Identities=25% Similarity=0.315 Sum_probs=29.2
Q ss_pred HHHHHhCCcEEEEEEecCCHHHHHHHHHCCCEEeceE
Q 026503 183 KQAVKMGYGRVEWIVLDWNVNAIKFYEEMGAKVLSEW 219 (237)
Q Consensus 183 ~~a~~~g~~~i~~~v~~~n~~a~~~y~k~GF~~~~~~ 219 (237)
+.+.+. +..++-.|..+|..++||.+.+|++...++
T Consensus 50 d~~l~~-Y~~l~N~V~~~N~~HIRfLk~lGA~f~~e~ 85 (86)
T PF11090_consen 50 DKMLKQ-YPVLWNFVWVGNKSHIRFLKSLGAVFHNEF 85 (86)
T ss_pred HHHHHH-hhheeEEEEeCCHHHHHHHHhcCcEEcccc
Confidence 444433 777888999999999999999999976654
No 120
>PF09390 DUF1999: Protein of unknown function (DUF1999); InterPro: IPR018987 This family contains a putative Fe-S binding reductase (Q72J89 from SWISSPROT) whose structure adopts an alpha and beta fold. ; PDB: 2D4O_A 2D4P_A.
Probab=87.01 E-value=9.5 Score=28.73 Aligned_cols=93 Identities=19% Similarity=0.189 Sum_probs=50.9
Q ss_pred CcEEEEe-cCCCccEEEEEEEecCCcccCCC-CceEEEEEEEccchhcCChHHHHHHHHHHHHHHhCCcEEEEEEecCCH
Q 026503 125 RETFASD-ETHDVTVAGFVLFFPNYSTFLAK-PGFYIEDIFVRECYRRKGFGRILLSAVAKQAVKMGYGRVEWIVLDWNV 202 (237)
Q Consensus 125 ~~~~~~~-~~~~~~vvG~~~~~~~~~~~~~~-~~~~i~~~~V~p~~rg~Gig~~ll~~~~~~a~~~g~~~i~~~v~~~n~ 202 (237)
.+.|++. .. +++.||+..... |.+. ++..+..+.+.|. +......-|+..+.+.|-..|..-+.+.+..
T Consensus 55 gHSFvA~~e~--~~~~GfvLAQaV---WQGdrptVlV~ri~~~~~-~~~~~~~GLLrAvvKSAYDa~VYEv~l~l~p--- 125 (161)
T PF09390_consen 55 GHSFVAEDEG--GELQGFVLAQAV---WQGDRPTVLVRRILLAPG-EPEEVYEGLLRAVVKSAYDAGVYEVHLHLDP--- 125 (161)
T ss_dssp S--EEEE-ET--TEEEEEEEEEEE---E-SSSEEEEEEEE---EE-SSHHHHHHHHHHHHHHHHHTT-SEEEE---T---
T ss_pred CCcEEEEccC--CceeeeeehhHH---hcCCCceEEEEEeecCCC-CcHHHHHHHHHHHHHhhhccceEEEEeeCCH---
Confidence 3456666 54 499999988643 4444 3455556655444 5567777899999999999999999887766
Q ss_pred HHHHHHHHCCCEEeceEEEEeecc
Q 026503 203 NAIKFYEEMGAKVLSEWRICRLTG 226 (237)
Q Consensus 203 ~a~~~y~k~GF~~~~~~~~~~~~~ 226 (237)
........-||...+.+.+..+.+
T Consensus 126 ~l~~A~~a~~~~~~~~lavr~LGs 149 (161)
T PF09390_consen 126 ELEAAARAEGFRLGGQLAVRVLGS 149 (161)
T ss_dssp HHHHHHHHTT----S---------
T ss_pred HHHHHHhhcccccCCeEEEEEecc
Confidence 566677888999888665555543
No 121
>PF04768 DUF619: Protein of unknown function (DUF619); InterPro: IPR006855 This region of unknown function is found at the C terminus of Neurospora crassa acetylglutamate synthase (2.7.2.8 from EC). It is also found C-terminal to the amino acid kinase region in some fungal acetylglutamate kinase enzymes (IPR001048 from INTERPRO). These enzymes play a role in arginine biosynthesis.; PDB: 3S6K_A 4AB7_F 3ZZF_B 3ZZI_D 3ZZH_A 3ZZG_A 3S6G_Y 3S6H_A 3S7Y_A.
Probab=86.68 E-value=4.9 Score=31.31 Aligned_cols=88 Identities=17% Similarity=0.292 Sum_probs=53.0
Q ss_pred cEEEEEEEecCCcccCCCCceEEEEEEEccchhcCChHHHHHHHHHHHHHHhCCcEEEEEEecCCHHHHHHH--HHCCCE
Q 026503 137 TVAGFVLFFPNYSTFLAKPGFYIEDIFVRECYRRKGFGRILLSAVAKQAVKMGYGRVEWIVLDWNVNAIKFY--EEMGAK 214 (237)
Q Consensus 137 ~vvG~~~~~~~~~~~~~~~~~~i~~~~V~p~~rg~Gig~~ll~~~~~~a~~~g~~~i~~~v~~~n~~a~~~y--~k~GF~ 214 (237)
..-|.+++.+.... ......++.-+.|.+..||.|++..+.+.+.+. .+.+...+...|+ ..++| +.-|+-
T Consensus 70 ~y~~~AIVt~e~~~-~~~~v~yLdKFav~~~~~g~gv~D~vf~~i~~d-----~p~L~Wrsr~~n~-~~~Wyf~rs~G~~ 142 (170)
T PF04768_consen 70 DYEGAAIVTPEGPD-SNGPVPYLDKFAVSKSAQGSGVADNVFNAIRKD-----FPKLFWRSREDNP-NNKWYFERSDGSF 142 (170)
T ss_dssp TSSEEEEEEEE-SC-TCTSEEEEEEEEE-HHHHHTTHHHHHHHHHHHH------SSEEEEEETT-T-THHHHHHH-SEEE
T ss_pred CceEEEEEEecCCC-CCCCCeEEEEEEecchhhhcCHHHHHHHHHHHh-----ccceEEEecCCCC-cccEEEEeeEEEE
Confidence 44455555432111 123468999999999999999999999988542 3457667777774 55666 456777
Q ss_pred EeceEEEEeecchHHhh
Q 026503 215 VLSEWRICRLTGDALDA 231 (237)
Q Consensus 215 ~~~~~~~~~~~~~~~~~ 231 (237)
..+.+.+|-.+-+.+++
T Consensus 143 ~~~~~~lFw~G~~d~~~ 159 (170)
T PF04768_consen 143 KRNGWVLFWYGIEDLNE 159 (170)
T ss_dssp EETTEEEEEESS--HHH
T ss_pred ECCCeEEEEcCCCCHHH
Confidence 76666555433334433
No 122
>KOG2036 consensus Predicted P-loop ATPase fused to an acetyltransferase [General function prediction only]
Probab=86.37 E-value=0.83 Score=43.04 Aligned_cols=36 Identities=19% Similarity=0.231 Sum_probs=31.2
Q ss_pred CCCceEEEEEEEccchhcCChHHHHHHHHHHHHHHh
Q 026503 153 AKPGFYIEDIFVRECYRRKGFGRILLSAVAKQAVKM 188 (237)
Q Consensus 153 ~~~~~~i~~~~V~p~~rg~Gig~~ll~~~~~~a~~~ 188 (237)
.-.+.+|..++|+|+|++.|+|++.++.+.++...+
T Consensus 611 ~l~GaRIVRIAvhP~y~~MGYGsrAvqLL~~y~eG~ 646 (1011)
T KOG2036|consen 611 KLSGARIVRIAVHPEYQKMGYGSRAVQLLTDYFEGK 646 (1011)
T ss_pred cccCceEEEEEeccchhccCccHHHHHHHHHHHhcc
Confidence 334678999999999999999999999999986654
No 123
>TIGR03827 GNAT_ablB putative beta-lysine N-acetyltransferase. Members of this protein family are GNAT family acetyltransferases, based on a seed alignment in which every member is associated with a lysine 2,3-aminomutase family protein, usually as the adjacent gene. This family includes AblB, the enzyme beta-lysine acetyltransferase that completes the two-step synthesis of the osmolyte (compatible solute) N-epsilon-acetyl-beta-lysine; all members of the family may have this function. Note that N-epsilon-acetyl-beta-lysine has been observed only in methanogenic archaea (e.g. Methanosarcina) but that this model, paired with TIGR03820, suggests a much broader distribution.
Probab=84.45 E-value=1.7 Score=36.22 Aligned_cols=49 Identities=18% Similarity=0.086 Sum_probs=41.3
Q ss_pred CChHHHHHHHHHHHHHHhCCcEEEEEEecCCHHHHHHHHHCCCEEeceEEEE
Q 026503 171 KGFGRILLSAVAKQAVKMGYGRVEWIVLDWNVNAIKFYEEMGAKVLSEWRIC 222 (237)
Q Consensus 171 ~Gig~~ll~~~~~~a~~~g~~~i~~~v~~~n~~a~~~y~k~GF~~~~~~~~~ 222 (237)
.|-...++..+.+.|+++|+.+|.+.|...+ ..+|+++||...+...-|
T Consensus 20 ~~~~~~~~~~~~~~a~~~~~~ki~~~~~~~~---~~~~~~~g~~~e~~i~~~ 68 (266)
T TIGR03827 20 GNDVEALIPDLDALAKKEGYTKIIAKVPGSD---KPLFEERGYLEEAKIPGY 68 (266)
T ss_pred CccHHHHHHHHHHHHHHcCCcEEEEEccHHH---HHHHHHCCCeEEEecccc
Confidence 3457889999999999999999988876665 679999999999877544
No 124
>PHA02769 hypothetical protein; Provisional
Probab=83.25 E-value=1.3 Score=31.84 Aligned_cols=45 Identities=20% Similarity=0.333 Sum_probs=30.7
Q ss_pred hHHHHHHHHHHHHHHh---CCcEEEEEEecCCHHHHHHHHHCCCEEeceE
Q 026503 173 FGRILLSAVAKQAVKM---GYGRVEWIVLDWNVNAIKFYEEMGAKVLSEW 219 (237)
Q Consensus 173 ig~~ll~~~~~~a~~~---g~~~i~~~v~~~n~~a~~~y~k~GF~~~~~~ 219 (237)
=|..|++.+...+.+. |..-+ ++.-.-.-+..+|.|.||+.+|..
T Consensus 93 pgd~lvnfl~~l~~k~~~dg~evl--wtlgfpdhsnaly~kagfk~vg~t 140 (154)
T PHA02769 93 PGDHLVNFLNDLAEKLKKDGFEVL--WTLGFPDHSNALYKKAGFKLVGQT 140 (154)
T ss_pred ChHHHHHHHHHHHHHHhcCCeEEE--EEecCCCcchhHHhhhhhhHhccc
Confidence 3677888777766543 55544 444444456789999999998753
No 125
>COG2935 Putative arginyl-tRNA:protein arginylyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=83.15 E-value=6.9 Score=32.21 Aligned_cols=61 Identities=10% Similarity=-0.008 Sum_probs=48.0
Q ss_pred CccEEEEEEEecCCcccCCCCceEEEEEEEccchhcCChHHHHHHHHHHHHHHhCCcEEEEEEecCC
Q 026503 135 DVTVAGFVLFFPNYSTFLAKPGFYIEDIFVRECYRRKGFGRILLSAVAKQAVKMGYGRVEWIVLDWN 201 (237)
Q Consensus 135 ~~~vvG~~~~~~~~~~~~~~~~~~i~~~~V~p~~rg~Gig~~ll~~~~~~a~~~g~~~i~~~v~~~n 201 (237)
.|++|+.+......+ ++...-.+-+|++...++|+.++-.=+.+|.+.|+..+++.-...+
T Consensus 159 ~G~LvAVavtDvL~d------GlSsVY~FydPd~s~~SLGt~~iL~~I~~aq~~~l~yvYLGYwI~~ 219 (253)
T COG2935 159 EGKLVAVAVTDVLPD------GLSSVYTFYDPDMSKRSLGTLSILDQIAIAQRLGLPYVYLGYWIKG 219 (253)
T ss_pred CCcEEEEEeeecccC------cceeEEEEeCCChhhhcchHHHHHHHHHHHHHhCCCeEEEEEEECC
Confidence 679999998876544 2333344569999999999999999999999999999999554443
No 126
>KOG3014 consensus Protein involved in establishing cohesion between sister chromatids during DNA replication [Replication, recombination and repair]
Probab=80.61 E-value=9.1 Score=31.56 Aligned_cols=29 Identities=31% Similarity=0.364 Sum_probs=25.9
Q ss_pred ceEEEEEEEccchhcCChHHHHHHHHHHH
Q 026503 156 GFYIEDIFVRECYRRKGFGRILLSAVAKQ 184 (237)
Q Consensus 156 ~~~i~~~~V~p~~rg~Gig~~ll~~~~~~ 184 (237)
.+.|..++|.+.-|++||++.|++.+...
T Consensus 183 ~~GIsRIWV~s~~Rr~gIAs~lldva~~~ 211 (257)
T KOG3014|consen 183 ICGISRIWVSSLRRRKGIASLLLDVARCN 211 (257)
T ss_pred EeeeEEEEeehhhhhhhhHHHHHHHHHHh
Confidence 46788999999999999999999988765
No 127
>KOG2747 consensus Histone acetyltransferase (MYST family) [Chromatin structure and dynamics]
Probab=80.32 E-value=3.4 Score=36.44 Aligned_cols=32 Identities=22% Similarity=0.477 Sum_probs=26.1
Q ss_pred eEEEEEEEccchhcCChHHHHHHHHHHHHHHh
Q 026503 157 FYIEDIFVRECYRRKGFGRILLSAVAKQAVKM 188 (237)
Q Consensus 157 ~~i~~~~V~p~~rg~Gig~~ll~~~~~~a~~~ 188 (237)
.-+.-|.|.|-||++|+|+.||+..-+.-+.-
T Consensus 261 yNlaCILtLPpyQRkGYGklLIdFSYeLSr~E 292 (396)
T KOG2747|consen 261 YNLACILTLPPYQRKGYGKLLIDFSYELSRRE 292 (396)
T ss_pred cceeeeeecChhhhcccchhhhhhhhhhhccc
Confidence 44667789999999999999999887765443
No 128
>cd04266 DUF619-NAGS-FABP DUF619 domain of N-acetylglutamate Synthase of the fungal arginine-biosynthetic pathway. DUF619-NAGS-FABP: This family includes the DUF619 domain of N-acetylglutamate synthase (NAGS) of the fungal arginine-biosynthetic pathway (FABP). This NAGS (also known as arginine-requiring protein 2 or ARG2) consists of an N-terminal NAG kinase-like domain and a C-terminal DUF619 domain. NAGS catalyzes the formation of NAG from acetylcoenzyme A and L-glutamate. The DUF619 domain, yet to be characterized, is predicted to function in NAGS association in fungi.
Probab=77.44 E-value=19 Score=25.81 Aligned_cols=45 Identities=20% Similarity=0.285 Sum_probs=34.9
Q ss_pred CCceEEEEEEEccchhc-CChHHHHHHHHHHHHHHhCCcE-EEEEEecCCHH
Q 026503 154 KPGFYIEDIFVRECYRR-KGFGRILLSAVAKQAVKMGYGR-VEWIVLDWNVN 203 (237)
Q Consensus 154 ~~~~~i~~~~V~p~~rg-~Gig~~ll~~~~~~a~~~g~~~-i~~~v~~~n~~ 203 (237)
....+|.-+.|.+..|| .|++..+.+.+.+ .... +...+...|+.
T Consensus 37 ~~v~yLdKFav~~~~~gl~gv~D~vf~~m~~-----~fp~~L~Wrsr~~n~~ 83 (108)
T cd04266 37 EKIAYLDKFAVLPKAQGSDGIADILFNAMLD-----GFPNELIWRSRKDNPV 83 (108)
T ss_pred CCceEEEEEEEccccccccchHHHHHHHHHH-----cCCCceEEEeCCCCcc
Confidence 34579999999999997 8999999998876 3444 66666777753
No 129
>COG5630 ARG2 Acetylglutamate synthase [Amino acid transport and metabolism]
Probab=76.73 E-value=11 Score=33.04 Aligned_cols=48 Identities=10% Similarity=0.115 Sum_probs=35.4
Q ss_pred cEEEEEEEecCCcccCCCCceEEEEEEEccchhc-CChHHHHHHHHHHHHH
Q 026503 137 TVAGFVLFFPNYSTFLAKPGFYIEDIFVRECYRR-KGFGRILLSAVAKQAV 186 (237)
Q Consensus 137 ~vvG~~~~~~~~~~~~~~~~~~i~~~~V~p~~rg-~Gig~~ll~~~~~~a~ 186 (237)
.--|.+++.....+ .++..|++-++|.++.|| -||+..+.+-+.+...
T Consensus 383 dY~g~aIlTyegs~--~~~vpYLDKfAVl~~aQGs~gisd~vfniM~e~fP 431 (495)
T COG5630 383 DYRGAAILTYEGSG--ENNVPYLDKFAVLDDAQGSEGISDAVFNIMREEFP 431 (495)
T ss_pred cceeeEEEEeeccC--CCCCcceeeeeccccccccchHHHHHHHHHHHhCc
Confidence 44566666554332 234578999999999999 8999999998877544
No 130
>COG2898 Uncharacterized conserved protein [Function unknown]
Probab=75.11 E-value=16 Score=33.79 Aligned_cols=61 Identities=20% Similarity=0.244 Sum_probs=48.0
Q ss_pred EecCCCccEEEEEEEecCCcccCCCCceEEEEEEEccchhcCChHHHHHHHHHHHHHHhCCcEEEE
Q 026503 130 SDETHDVTVAGFVLFFPNYSTFLAKPGFYIEDIFVRECYRRKGFGRILLSAVAKQAVKMGYGRVEW 195 (237)
Q Consensus 130 ~~~~~~~~vvG~~~~~~~~~~~~~~~~~~i~~~~V~p~~rg~Gig~~ll~~~~~~a~~~g~~~i~~ 195 (237)
+..+++|+||||+.+.+... ...+.++-+--+|+.- +|+-..|+..++.+++++|+..+.+
T Consensus 396 a~~~~~g~VvaFa~l~~~~~----~~~~SlDlMR~sp~ap-~g~mdfLf~~li~~aKe~G~~~fsL 456 (538)
T COG2898 396 AAVDNEGEVVAFANLMPTGG----KEGYSLDLMRRSPDAP-NGTMDFLFSELILWAKEEGYQRFSL 456 (538)
T ss_pred eEEcCCCCeEEEEeecccCC----cceeEEEeeecCCCCC-chHHHHHHHHHHHHHHHcCCeEEec
Confidence 33344668999999987653 2356677777777754 8999999999999999999999876
No 131
>PF09924 DUF2156: Uncharacterized conserved protein (DUF2156); InterPro: IPR024320 This domain of unknown function is found in uncharacterised proteins and in Lysylphosphatidylglycerol synthetase, which catalyses the transfer of a lysyl group from L-lysyl-tRNA(Lys) to membrane-bound phosphatidylglycerol [].; PDB: 2HQY_A.
Probab=74.04 E-value=53 Score=27.70 Aligned_cols=65 Identities=15% Similarity=0.117 Sum_probs=42.3
Q ss_pred CCcEEEEec-CCCccEEEEEEEecCCcccCCCCceEEEEEEEccchhcCChHHHHHHHHHHHHHHhCCcEEEE
Q 026503 124 DRETFASDE-THDVTVAGFVLFFPNYSTFLAKPGFYIEDIFVRECYRRKGFGRILLSAVAKQAVKMGYGRVEW 195 (237)
Q Consensus 124 ~~~~~~~~~-~~~~~vvG~~~~~~~~~~~~~~~~~~i~~~~V~p~~rg~Gig~~ll~~~~~~a~~~g~~~i~~ 195 (237)
+...+++.+ ++ +++|++.+.+.. +..++.++..--+++ --+|+-..|+..+++.+++.|+..+.+
T Consensus 179 ~~~~~~~~~~dg--ki~af~~~~~~~----~~~~~~~~~~k~~~~-a~~G~~e~l~~~~~~~~~~~g~~~lnL 244 (299)
T PF09924_consen 179 GLRGFVARVADG--KIVAFAIGSPLG----GRDGWSIDFEKADPD-APKGIYEFLNVEFAEHLKAEGVEYLNL 244 (299)
T ss_dssp T-EEEEEEE-TT--EEEEEEEEEEEE-----TTEEEEEEEEE-TT--STTHHHHHHHHHHHHS--TT--EEE-
T ss_pred CceEEEEEECCC--cEEEEEEEEEcc----CCccEEEEEEecCCC-CCCcHHHHHHHHHHHhhhhCCceEEEc
Confidence 445666666 55 999999998664 133455544444555 468999999999999999889999864
No 132
>COG5027 SAS2 Histone acetyltransferase (MYST family) [Chromatin structure and dynamics]
Probab=73.03 E-value=2.9 Score=36.08 Aligned_cols=55 Identities=16% Similarity=0.306 Sum_probs=34.9
Q ss_pred CcEEEEecCCCc--cEEEEEEEecCCcccCCCCceEEEEEEEccchhcCChHHHHHHHHHHH
Q 026503 125 RETFASDETHDV--TVAGFVLFFPNYSTFLAKPGFYIEDIFVRECYRRKGFGRILLSAVAKQ 184 (237)
Q Consensus 125 ~~~~~~~~~~~~--~vvG~~~~~~~~~~~~~~~~~~i~~~~V~p~~rg~Gig~~ll~~~~~~ 184 (237)
..+++....++. .+|||..=... .....-+.-+-+.|-||++|+|+.|++..-..
T Consensus 234 flFYvl~~~~~~~~h~vGyFSKEK~-----S~~~yNLaCILtLP~yQRrGYG~lLIdFSY~L 290 (395)
T COG5027 234 FLFYVLTERGDTGCHLVGYFSKEKE-----SEQDYNLACILTLPPYQRRGYGKLLIDFSYLL 290 (395)
T ss_pred eEEEEEEEcCCcceeeeeeechhhc-----ccccCceEEEEecChhHhcccceEeeeeeeec
Confidence 334454433332 48888754221 22335566778999999999999988765443
No 133
>PRK02983 lysS lysyl-tRNA synthetase; Provisional
Probab=72.88 E-value=21 Score=36.23 Aligned_cols=59 Identities=17% Similarity=0.240 Sum_probs=47.4
Q ss_pred CCCccEEEEEEEecCCcccCCCCceEEEEEEEccchhcCChHHHHHHHHHHHHHHhCCcEEEEEE
Q 026503 133 THDVTVAGFVLFFPNYSTFLAKPGFYIEDIFVRECYRRKGFGRILLSAVAKQAVKMGYGRVEWIV 197 (237)
Q Consensus 133 ~~~~~vvG~~~~~~~~~~~~~~~~~~i~~~~V~p~~rg~Gig~~ll~~~~~~a~~~g~~~i~~~v 197 (237)
+.+|+++|++.+.+.. ..++.++.+--+|+. -+|+...|+..++.++++.|+..+.+..
T Consensus 427 d~~G~i~af~s~~p~~-----~~g~slDLMRr~pda-pnGvmE~L~~~l~~~~k~~G~~~~sLg~ 485 (1094)
T PRK02983 427 DADGQVVALLSFVPWG-----RRGLSLDLMRRSPDA-PNGVIELMVAELALEAESLGITRISLNF 485 (1094)
T ss_pred CCCCeEEEEEEEeeeC-----CCCEEEEecccCCCC-CCCHHHHHHHHHHHHHHHcCCCEEEech
Confidence 4457999999998743 235777666667775 6899999999999999999999998744
No 134
>PF04816 DUF633: Family of unknown function (DUF633) ; InterPro: IPR006901 This is a family of uncharacterised bacterial proteins.; GO: 0016429 tRNA (adenine-N1-)-methyltransferase activity; PDB: 3LEC_A 3KU1_G 3KR9_A 3GNL_B.
Probab=67.98 E-value=12 Score=30.00 Aligned_cols=51 Identities=14% Similarity=0.128 Sum_probs=37.2
Q ss_pred ChHHHHHHHHHHHHHHh--CCcEEEEEEecCCHHHHHHHHHCCCEEeceEEEE
Q 026503 172 GFGRILLSAVAKQAVKM--GYGRVEWIVLDWNVNAIKFYEEMGAKVLSEWRIC 222 (237)
Q Consensus 172 Gig~~ll~~~~~~a~~~--g~~~i~~~v~~~n~~a~~~y~k~GF~~~~~~~~~ 222 (237)
|+|..++..+++..... ....+++.........+++..++||..+.|..+.
T Consensus 74 GMGG~lI~~ILe~~~~~~~~~~~lILqP~~~~~~LR~~L~~~gf~I~~E~lv~ 126 (205)
T PF04816_consen 74 GMGGELIIEILEAGPEKLSSAKRLILQPNTHAYELRRWLYENGFEIIDEDLVE 126 (205)
T ss_dssp EE-HHHHHHHHHHTGGGGTT--EEEEEESS-HHHHHHHHHHTTEEEEEEEEEE
T ss_pred cCCHHHHHHHHHhhHHHhccCCeEEEeCCCChHHHHHHHHHCCCEEEEeEEEe
Confidence 78888999998876543 5567877777777788889999999999875544
No 135
>PF12261 T_hemolysin: Thermostable hemolysin; InterPro: IPR022050 This family of proteins is found in bacteria. Proteins in this family are typically between 200 and 228 amino acids in length. T_hemolysin is a pore-forming toxin of bacteria, able to lyse erythrocytes from a number of mammalian species.
Probab=67.84 E-value=17 Score=28.64 Aligned_cols=53 Identities=17% Similarity=0.291 Sum_probs=44.3
Q ss_pred eEEEEEEEccchhcCChHHHHHHHHHHHHHHhCCcEEEEEEecCCHHHHHHHHHCCCEEe
Q 026503 157 FYIEDIFVRECYRRKGFGRILLSAVAKQAVKMGYGRVEWIVLDWNVNAIKFYEEMGAKVL 216 (237)
Q Consensus 157 ~~i~~~~V~p~~rg~Gig~~ll~~~~~~a~~~g~~~i~~~v~~~n~~a~~~y~k~GF~~~ 216 (237)
++|+.++- .+.|.++.|+..+.......|++.+ +.+.+...++++.|+|....
T Consensus 88 vEvGnLAs----~~~g~~~~l~~~l~~~L~~~g~~w~---vfTaT~~lr~~~~rlgl~~~ 140 (179)
T PF12261_consen 88 VEVGNLAS----FSPGAARLLFAALAQLLAQQGFEWV---VFTATRQLRNLFRRLGLPPT 140 (179)
T ss_pred eEeechhh----cCcccHHHHHHHHHHHHHHCCCCEE---EEeCCHHHHHHHHHcCCCce
Confidence 45555553 3589999999999999999999998 67788899999999999875
No 136
>PRK04531 acetylglutamate kinase; Provisional
Probab=66.14 E-value=57 Score=29.13 Aligned_cols=61 Identities=25% Similarity=0.462 Sum_probs=43.7
Q ss_pred ceEEEEEEEccchhcCChHHHHHHHHHHHHHHhCCcEEEEEEecCCHHHHHHH--HHCCCEEeceEEEE
Q 026503 156 GFYIEDIFVRECYRRKGFGRILLSAVAKQAVKMGYGRVEWIVLDWNVNAIKFY--EEMGAKVLSEWRIC 222 (237)
Q Consensus 156 ~~~i~~~~V~p~~rg~Gig~~ll~~~~~~a~~~g~~~i~~~v~~~n~~a~~~y--~k~GF~~~~~~~~~ 222 (237)
..|+.-|.|.+..||.|++..+...+.+. .+.+.+.+...|+. .++| +.-|+...+.+.+|
T Consensus 310 ~~~Ldkf~v~~~~~~~~v~d~vf~~~~~~-----~~~L~Wrsr~~n~~-~~Wyf~~s~G~~~~~~~~lF 372 (398)
T PRK04531 310 GPYLDKFAVLDDARGEGLGRAVWNVMREE-----TPQLFWRSRHNNTI-NKFYYAESDGCIKQEKWKVF 372 (398)
T ss_pred ceEeEEEEEccchhhcChHHHHHHHHHhh-----CCceEEEcCCCCCc-cceeeecccceEecCCcEEE
Confidence 47899999999999999999999988764 34566666666643 3444 44566665555433
No 137
>PF08901 DUF1847: Protein of unknown function (DUF1847); InterPro: IPR014997 This group of proteins are functionally uncharacterised. They contain 4 N-terminal cysteines that may form a zinc-binding domain.
Probab=59.56 E-value=15 Score=28.12 Aligned_cols=42 Identities=21% Similarity=0.207 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHhCCcEEEE--EEecCCH--HHHHHHHHCCCEEece
Q 026503 177 LLSAVAKQAVKMGYGRVEW--IVLDWNV--NAIKFYEEMGAKVLSE 218 (237)
Q Consensus 177 ll~~~~~~a~~~g~~~i~~--~v~~~n~--~a~~~y~k~GF~~~~~ 218 (237)
=+++++++|++.|++++-+ .+.-.++ ...++++..||++.+-
T Consensus 42 RveEiieFak~mgykkiGiAfCiGL~~EA~~~~~iL~~~gFev~sV 87 (157)
T PF08901_consen 42 RVEEIIEFAKRMGYKKIGIAFCIGLRKEARILAKILEANGFEVYSV 87 (157)
T ss_pred hHHHHHHHHHHcCCCeeeehhhHhHHHHHHHHHHHHHHCCCEEEEE
Confidence 3678889999999999976 2222233 3347788999999875
No 138
>PF02474 NodA: Nodulation protein A (NodA); InterPro: IPR003484 Rhizobial nodulation (Nod) factors are signalling molecules secreted by root-nodulating rhizobia in response to flavanoids excreted by the host plant. They induce various symbiotic responses on the roots of the leguminous host plant at low concentrations, and are required for successful infection. Rhizobial Nod factors are lipo-chitooligosaccharides carrying various substituents which are important determinants of host specificity []. NodA is an N-acyl transferase which specifies the transfer of an acyl chain to the oligosaccharide backbone of Nod factor. Allelic variation of the nodA gene can contribute to the determination of host range [].; GO: 0016746 transferase activity, transferring acyl groups
Probab=57.97 E-value=28 Score=27.24 Aligned_cols=53 Identities=11% Similarity=-0.093 Sum_probs=39.5
Q ss_pred ceEEEEEEEccchhcCChHHHHHHHHHHHHHHhCCcEEEEEEecCCHHHHHHHHHCC
Q 026503 156 GFYIEDIFVRECYRRKGFGRILLSAVAKQAVKMGYGRVEWIVLDWNVNAIKFYEEMG 212 (237)
Q Consensus 156 ~~~i~~~~V~p~~rg~Gig~~ll~~~~~~a~~~g~~~i~~~v~~~n~~a~~~y~k~G 212 (237)
..+++.+.|.|+.+|.||+..| ..+.-...+.|.......| ..+..+.++|++
T Consensus 85 VaElGLygVRpDLEGlGi~hs~-r~m~PvLq~LgVPF~FGtV---R~al~~Hv~R~~ 137 (196)
T PF02474_consen 85 VAELGLYGVRPDLEGLGISHSM-RVMYPVLQELGVPFGFGTV---RHALRNHVERLC 137 (196)
T ss_pred EEEEEEEEeeccccccccchhh-hhhhhHHHhcCCCeecccc---hHHHHHHHHHHh
Confidence 3678889999999999999976 5666667777888765444 346666777665
No 139
>cd03173 DUF619-like DUF619 domain of various N-acetylglutamate Kinases and N-acetylglutamate Synthases. DUF619-like: This family includes the DUF619 domain of various N-acetylglutamate synthases (NAGS) of the urea cycle found in humans and fish, the DUF619 domain of the NAGS of the fungal arginine-biosynthetic pathway (FABP), as well as the DUF619 domain present C-terminal of a NAG kinase-like domain in a limited number of predicted NAGSs found in bacteria and Dictyostelium. Ureogenic NAGS is a mitochondrial enzyme catalyzing the formation of NAG from acetylcoenzyme A and L-glutamate. NAGS is an essential allosteric activator of carbamylphosphate synthase I, the first and rate limiting enzyme of the urea cycle. Domain architecture of ureogenic and fungal NAGS consists of an N-terminal NAG kinase-like domain and a C-terminal DUF619 domain. This subgroup also includes the DUF619 domain of the FABP N-acetylglutamate kinase (NAGK), the enzyme that catalyzes the second reaction of arginine
Probab=56.62 E-value=67 Score=22.57 Aligned_cols=42 Identities=12% Similarity=0.239 Sum_probs=34.3
Q ss_pred ceEEEEEEEccchhcCChHHHHHHHHHHHHHHhCCcEEEEEEecCCH
Q 026503 156 GFYIEDIFVRECYRRKGFGRILLSAVAKQAVKMGYGRVEWIVLDWNV 202 (237)
Q Consensus 156 ~~~i~~~~V~p~~rg~Gig~~ll~~~~~~a~~~g~~~i~~~v~~~n~ 202 (237)
..+|.-+.|.+..++.|++..+.+.+.+. ...+...+.+.|+
T Consensus 33 v~~LdkFav~~~~~~~gv~D~vf~~i~~d-----~~~L~Wrsr~~n~ 74 (98)
T cd03173 33 IPYLDKFAVSDHLWLNNVTDNIFNLIRKD-----FPSLLWRVRENDA 74 (98)
T ss_pred CEEEEEEEEcccccccCHHHHHHHHHHhh-----CCeeEEEeCCCCC
Confidence 56999999999999999999999988653 4567667777774
No 140
>cd07235 MRD Mitomycin C resistance protein (MRD). Mitomycin C (MC) is a naturally occurring antibiotic, and antitumor agent used in the treatment of cancer. Its antitumor activity is exerted primarily through monofunctional and bifunctional alkylation of DNA. MRD binds to MC and functions as a component of the MC exporting system. MC is bound to MRD by a stacking interaction between a His and a Trp. MRD adopts a structural fold similar to bleomycin resistance protein, glyoxalase I, and extradiol dioxygenases; and it has binding sites at an identical location to binding sites in these evolutionarily related enzymes.
Probab=55.01 E-value=14 Score=26.02 Aligned_cols=18 Identities=17% Similarity=0.355 Sum_probs=14.6
Q ss_pred CCHHHHHHHHHCCCEEec
Q 026503 200 WNVNAIKFYEEMGAKVLS 217 (237)
Q Consensus 200 ~n~~a~~~y~k~GF~~~~ 217 (237)
+-.++++||+++||+...
T Consensus 10 D~~~a~~FY~~LGf~~~~ 27 (122)
T cd07235 10 DMAKSLDFYRRLGFDFPE 27 (122)
T ss_pred cHHHHHHHHHHhCceecC
Confidence 345899999999998753
No 141
>COG5092 NMT1 N-myristoyl transferase [Lipid metabolism]
Probab=52.15 E-value=1.6e+02 Score=25.52 Aligned_cols=87 Identities=11% Similarity=0.033 Sum_probs=45.5
Q ss_pred CccEEEEEEEecCCccc------CCCCceEEEEEEEccchhcC------Ch---HHHHHHHHHHHHHHhCCcEEEEEEec
Q 026503 135 DVTVAGFVLFFPNYSTF------LAKPGFYIEDIFVRECYRRK------GF---GRILLSAVAKQAVKMGYGRVEWIVLD 199 (237)
Q Consensus 135 ~~~vvG~~~~~~~~~~~------~~~~~~~i~~~~V~p~~rg~------Gi---g~~ll~~~~~~a~~~g~~~i~~~v~~ 199 (237)
+|++-+|..++..+.+. ..-...|+.-.+.+..+..- -+ -..|+..++-.++..|+.-.-..+-.
T Consensus 319 ~gkItdFfsFyslp~t~i~n~kykdiq~gYLYYya~d~~~kd~~~~a~~a~~~r~~e~v~Da~ilak~~~~DVFNalt~~ 398 (451)
T COG5092 319 NGKITDFFSFYSLPFTTIENKKYKDIQGGYLYYYAGDDQFKDFDPKATKALKTRVAEMVGDAMILAKVEGCDVFNALTMM 398 (451)
T ss_pred CCccccceEEEeccceeecCccccccceeEEEEEccCccccccChHHHHHHHHHHHHHHHHHHHHHHHcCCchhhhhhhc
Confidence 56888888887544221 11223455444443322211 01 12355555556666676655443444
Q ss_pred CCHHHHHHHHHCCCEEeceEEEEee
Q 026503 200 WNVNAIKFYEEMGAKVLSEWRICRL 224 (237)
Q Consensus 200 ~n~~a~~~y~k~GF~~~~~~~~~~~ 224 (237)
.|. -|...++|-.-.-+..|.+
T Consensus 399 dN~---lFL~dLkFg~GdGflnyYl 420 (451)
T COG5092 399 DNS---LFLADLKFGCGDGFLNYYL 420 (451)
T ss_pred cch---hHHHhcCccCCCceeEEEE
Confidence 443 3788999987765544433
No 142
>cd08353 Glo_EDI_BRP_like_7 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.
Probab=51.91 E-value=14 Score=26.99 Aligned_cols=28 Identities=25% Similarity=0.275 Sum_probs=19.3
Q ss_pred CcEEEEEEecCCHHHHHHHHHCCCEEece
Q 026503 190 YGRVEWIVLDWNVNAIKFYEEMGAKVLSE 218 (237)
Q Consensus 190 ~~~i~~~v~~~n~~a~~~y~k~GF~~~~~ 218 (237)
+..+.+.|. +-..+++||.++||+...+
T Consensus 4 i~Hi~i~v~-Dl~~s~~FY~~LG~~~~~~ 31 (142)
T cd08353 4 MDNVGIVVR-DLEAAIAFFLELGLELEGR 31 (142)
T ss_pred eeeEEEEeC-CHHHHHHHHHHcCCEEccc
Confidence 344544443 3458999999999987654
No 143
>COG2384 Predicted SAM-dependent methyltransferase [General function prediction only]
Probab=49.04 E-value=44 Score=27.26 Aligned_cols=48 Identities=13% Similarity=0.147 Sum_probs=37.7
Q ss_pred ChHHHHHHHHHHHHHHh--CCcEEEEEEecCCHHHHHHHHHCCCEEeceE
Q 026503 172 GFGRILLSAVAKQAVKM--GYGRVEWIVLDWNVNAIKFYEEMGAKVLSEW 219 (237)
Q Consensus 172 Gig~~ll~~~~~~a~~~--g~~~i~~~v~~~n~~a~~~y~k~GF~~~~~~ 219 (237)
|+|..++..+++...++ +..++++-....-..-+.+..+++|+...|.
T Consensus 93 GMGG~lI~~ILee~~~~l~~~~rlILQPn~~~~~LR~~L~~~~~~I~~E~ 142 (226)
T COG2384 93 GMGGTLIREILEEGKEKLKGVERLILQPNIHTYELREWLSANSYEIKAET 142 (226)
T ss_pred CCcHHHHHHHHHHhhhhhcCcceEEECCCCCHHHHHHHHHhCCceeeeee
Confidence 89999999999887665 6667776655555677788899999998753
No 144
>PF04339 DUF482: Protein of unknown function, DUF482; InterPro: IPR007434 This family contains several proteins of uncharacterised function.
Probab=46.44 E-value=78 Score=27.98 Aligned_cols=71 Identities=15% Similarity=0.089 Sum_probs=51.5
Q ss_pred EEEEccchhcCChHHHHHHHHHHHHHHhCCcEEEEEEecCCHHHHHHHHHCCCEEeceE--EEEeecchHHhhhh
Q 026503 161 DIFVRECYRRKGFGRILLSAVAKQAVKMGYGRVEWIVLDWNVNAIKFYEEMGAKVLSEW--RICRLTGDALDAYG 233 (237)
Q Consensus 161 ~~~V~p~~rg~Gig~~ll~~~~~~a~~~g~~~i~~~v~~~n~~a~~~y~k~GF~~~~~~--~~~~~~~~~~~~~~ 233 (237)
.+.++++.....+...|++.+.+.+++.|+..+. +.--++.-....+..||...... .....+-..+|.|.
T Consensus 105 R~l~~~~~~~~~~~~~L~~~~~~~a~~~~~Ss~h--~lF~~~~~~~~l~~~G~~~r~~~qf~W~N~gy~~FDdfL 177 (370)
T PF04339_consen 105 RLLIAPGADRAALRAALLQALEQLAEENGLSSWH--ILFPDEEDAAALEEAGFLSRQGVQFHWHNRGYRSFDDFL 177 (370)
T ss_pred ceeECCCCCHHHHHHHHHHHHHHHHHHcCCCcce--eecCCHHHHHHHHhCCCceecCCceEEecCCCCCHHHHH
Confidence 5667888888889999999999999999988774 44455666678899999886543 23334445555554
No 145
>cd09012 Glo_EDI_BRP_like_24 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.
Probab=42.92 E-value=20 Score=25.38 Aligned_cols=17 Identities=18% Similarity=0.325 Sum_probs=14.5
Q ss_pred CHHHHHHHHHCCCEEec
Q 026503 201 NVNAIKFYEEMGAKVLS 217 (237)
Q Consensus 201 n~~a~~~y~k~GF~~~~ 217 (237)
=.++++||+++||+...
T Consensus 11 l~~s~~FY~~lGf~~~~ 27 (124)
T cd09012 11 LEKSTAFYTALGFEFNP 27 (124)
T ss_pred HHHHHHHHHHCCCEEcc
Confidence 36899999999999764
No 146
>cd08356 Glo_EDI_BRP_like_17 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.
Probab=42.40 E-value=21 Score=25.04 Aligned_cols=17 Identities=24% Similarity=0.503 Sum_probs=14.8
Q ss_pred HHHHHHHHHCCCEEece
Q 026503 202 VNAIKFYEEMGAKVLSE 218 (237)
Q Consensus 202 ~~a~~~y~k~GF~~~~~ 218 (237)
.++++||+.+||+....
T Consensus 13 ~~s~~FY~~LGf~~~~~ 29 (113)
T cd08356 13 AESKQFYQALGFELEWE 29 (113)
T ss_pred HHHHHHHHHhCCeeEec
Confidence 58999999999998754
No 147
>COG3473 Maleate cis-trans isomerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=42.26 E-value=47 Score=26.88 Aligned_cols=34 Identities=21% Similarity=0.291 Sum_probs=26.7
Q ss_pred HHHhCCcEEEE---EEecCCHHHHHHHHHCCCEEece
Q 026503 185 AVKMGYGRVEW---IVLDWNVNAIKFYEEMGAKVLSE 218 (237)
Q Consensus 185 a~~~g~~~i~~---~v~~~n~~a~~~y~k~GF~~~~~ 218 (237)
.+..|+.++.+ .+.+-|.....|+++.||+++.-
T Consensus 113 L~al~a~ri~vlTPY~~evn~~e~ef~~~~Gfeiv~~ 149 (238)
T COG3473 113 LNALGAQRISVLTPYIDEVNQREIEFLEANGFEIVDF 149 (238)
T ss_pred HHhhCcceEEEeccchhhhhhHHHHHHHhCCeEEEEe
Confidence 34557777766 45677999999999999999863
No 148
>PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A.
Probab=40.21 E-value=81 Score=22.60 Aligned_cols=42 Identities=17% Similarity=0.139 Sum_probs=30.0
Q ss_pred HHHHHHHHHHHhCCcEEEEEEecCCHHHHHHHHHCCCEEece
Q 026503 177 LLSAVAKQAVKMGYGRVEWIVLDWNVNAIKFYEEMGAKVLSE 218 (237)
Q Consensus 177 ll~~~~~~a~~~g~~~i~~~v~~~n~~a~~~y~k~GF~~~~~ 218 (237)
.+..+++.+.+.|.+.+++.....++..+++.++.|.+.++.
T Consensus 67 ~~~~~v~~~~~~g~~~v~~~~g~~~~~~~~~a~~~gi~vigp 108 (116)
T PF13380_consen 67 KVPEIVDEAAALGVKAVWLQPGAESEELIEAAREAGIRVIGP 108 (116)
T ss_dssp HHHHHHHHHHHHT-SEEEE-TTS--HHHHHHHHHTT-EEEES
T ss_pred HHHHHHHHHHHcCCCEEEEEcchHHHHHHHHHHHcCCEEEeC
Confidence 445556666777999999988889999999999999998863
No 149
>COG2994 HlyC ACP:hemolysin acyltransferase (hemolysin-activating protein) [Posttranslational modification, protein turnover, chaperones]
Probab=39.27 E-value=89 Score=23.54 Aligned_cols=19 Identities=16% Similarity=-0.015 Sum_probs=13.8
Q ss_pred EEEecCCCccEEEEEEEec
Q 026503 128 FASDETHDVTVAGFVLFFP 146 (237)
Q Consensus 128 ~~~~~~~~~~vvG~~~~~~ 146 (237)
|..+.+++|++||||++..
T Consensus 54 f~ly~de~g~Piaf~~WA~ 72 (148)
T COG2994 54 FALYFDEHGRPIAFCTWAF 72 (148)
T ss_pred eEEEEcCCCCeeEEEEEee
Confidence 4444445779999999974
No 150
>cd08358 Glo_EDI_BRP_like_21 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.
Probab=38.80 E-value=69 Score=23.47 Aligned_cols=18 Identities=44% Similarity=0.731 Sum_probs=14.2
Q ss_pred CHHHHHHHH-HCCCEEece
Q 026503 201 NVNAIKFYE-EMGAKVLSE 218 (237)
Q Consensus 201 n~~a~~~y~-k~GF~~~~~ 218 (237)
-++|++||+ .+||+..++
T Consensus 13 lerSi~FY~~vLG~~~~~~ 31 (127)
T cd08358 13 RNKTIKFYREVLGMKVLRH 31 (127)
T ss_pred HHHHHHHHHHhcCCEEEee
Confidence 469999995 599997653
No 151
>PF02388 FemAB: FemAB family; InterPro: IPR003447 The femAB operon codes for two nearly identical approximately 50kDa proteins involved in the formation of the Staphylococcal pentaglycine interpeptide bridge in peptidoglycan []. These proteins are also considered as a factor influencing the level of methicillin resistance [].; GO: 0016755 transferase activity, transferring amino-acyl groups; PDB: 1XE4_A 1NE9_A 3GKR_A 1XIX_A 1P4N_A 1XF8_A 1LRZ_A.
Probab=38.48 E-value=95 Score=27.68 Aligned_cols=83 Identities=17% Similarity=0.107 Sum_probs=0.0
Q ss_pred EEEecCCCccEEEEEEEecCCcccCCCCceEEEEEEEcc--chhcCChHHHHHHHHHHHHHHhCCcEEEE---EEecC--
Q 026503 128 FASDETHDVTVAGFVLFFPNYSTFLAKPGFYIEDIFVRE--CYRRKGFGRILLSAVAKQAVKMGYGRVEW---IVLDW-- 200 (237)
Q Consensus 128 ~~~~~~~~~~vvG~~~~~~~~~~~~~~~~~~i~~~~V~p--~~rg~Gig~~ll~~~~~~a~~~g~~~i~~---~v~~~-- 200 (237)
++...+++++++|.+++...... ....+..+-=-| +|...-+-..++..+.++++++++-.+.+ .....
T Consensus 37 ~vgv~~d~~~v~aa~ll~~~~~~----~g~~~~yiprGPv~d~~d~ell~~f~~~Lk~~akk~~a~~lridP~~~~~~~~ 112 (406)
T PF02388_consen 37 RVGVKDDGGEVAAAALLLRKKPF----KGFKYAYIPRGPVMDYSDEELLEFFLEELKKYAKKKRALFLRIDPNVIYQERD 112 (406)
T ss_dssp EEEEE-TTS-EEEEEEEEEEECT----TTCEEEEETT--EC-TT-HHHHHHHHHHHHHHHCTTTEEEEEE--S-EEECE-
T ss_pred EEEEEeCCCeEEEEEEEEEeccC----CceeEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEEeCchhhhhcc
Q ss_pred ----------CHHHHHHHHHCCCE
Q 026503 201 ----------NVNAIKFYEEMGAK 214 (237)
Q Consensus 201 ----------n~~a~~~y~k~GF~ 214 (237)
|...+..++++||+
T Consensus 113 ~~g~~~~~~~~~~~~~~l~~~G~~ 136 (406)
T PF02388_consen 113 EDGEPIEGEENDELIENLKALGFR 136 (406)
T ss_dssp TTS-EEEE-S-THHHHHHHHTT-C
T ss_pred cccccccCcchHHHHHHHHhcCce
No 152
>cd08350 BLMT_like BLMT, a bleomycin resistance protein encoded on the transposon Tn5, and similar proteins. BLMT is a bleomycin (Bm) resistance protein, encoded by the ble gene on the transposon Tn5. This protein confers a survival advantage to Escherichia coli host cells. Bm is a glycopeptide antibiotic produced naturally by actinomycetes. It is a potent anti-cancer drug, which acts as a strong DNA-cutting agent, thereby causing cell death. BLMT has strong binding affinity to Bm and it protects against this lethal compound through drug sequestering. BLMT has two identically-folded subdomains, with the same alpha/beta fold; these two halves have no sequence similarity. BLMT is a dimer with two Bm-binding pockets formed at the dimer interface.
Probab=37.71 E-value=31 Score=24.30 Aligned_cols=18 Identities=22% Similarity=0.209 Sum_probs=14.8
Q ss_pred CHHHHHHHHHCCCEEece
Q 026503 201 NVNAIKFYEEMGAKVLSE 218 (237)
Q Consensus 201 n~~a~~~y~k~GF~~~~~ 218 (237)
-..+++||.++||+...+
T Consensus 13 l~~s~~FY~~lG~~~~~~ 30 (120)
T cd08350 13 LDATEAFYARLGFSVGYR 30 (120)
T ss_pred HHHHHHHHHHcCCEEEec
Confidence 368999998899998653
No 153
>PF12953 DUF3842: Domain of unknown function (DUF3842); InterPro: IPR024208 This family of proteins has no known function.
Probab=37.42 E-value=54 Score=24.30 Aligned_cols=45 Identities=24% Similarity=0.241 Sum_probs=34.2
Q ss_pred chhcCChHHHHHHHHHHHHHHhCCcEEEEEEecCCHHHHHHHHHCCCEE
Q 026503 167 CYRRKGFGRILLSAVAKQAVKMGYGRVEWIVLDWNVNAIKFYEEMGAKV 215 (237)
Q Consensus 167 ~~rg~Gig~~ll~~~~~~a~~~g~~~i~~~v~~~n~~a~~~y~k~GF~~ 215 (237)
+=||=|||+.++..+.+...+ .+.+...-.|.-+..-..|.|-..
T Consensus 6 DGQGGGiG~~iv~~lr~~~~~----~~eI~AlGTNa~AT~~MlKaGA~~ 50 (131)
T PF12953_consen 6 DGQGGGIGKQIVEKLRKELPE----EVEIIALGTNAIATSAMLKAGANE 50 (131)
T ss_pred eCCCChhHHHHHHHHHHhCCC----CcEEEEEehhHHHHHHHHHcCCCC
Confidence 448899999999988765433 355566777888888889988764
No 154
>TIGR02990 ectoine_eutA ectoine utilization protein EutA. Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti and Silicibacter pomeroyi. It is missing from two other species with the other ectoine transport and utilization genes: Pseudomonas putida and Agrobacterium tumefaciens.
Probab=36.38 E-value=51 Score=27.15 Aligned_cols=43 Identities=12% Similarity=0.189 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHHhCCcEEEEE---EecCCHHHHHHHHHCCCEEece
Q 026503 176 ILLSAVAKQAVKMGYGRVEWI---VLDWNVNAIKFYEEMGAKVLSE 218 (237)
Q Consensus 176 ~ll~~~~~~a~~~g~~~i~~~---v~~~n~~a~~~y~k~GF~~~~~ 218 (237)
.-...+++-++..|.++|.+. +..-|....+||++.||+++..
T Consensus 106 t~~~A~~~AL~alg~~RIalvTPY~~~v~~~~~~~l~~~G~eV~~~ 151 (239)
T TIGR02990 106 TPSSAAVDGLAALGVRRISLLTPYTPETSRPMAQYFAVRGFEIVNF 151 (239)
T ss_pred CHHHHHHHHHHHcCCCEEEEECCCcHHHHHHHHHHHHhCCcEEeee
Confidence 344555556667799999773 3555788999999999999864
No 155
>PTZ00129 40S ribosomal protein S14; Provisional
Probab=35.18 E-value=1.9e+02 Score=22.07 Aligned_cols=44 Identities=14% Similarity=0.120 Sum_probs=35.9
Q ss_pred HHHHHHHHHHHHHHhCCcEEEEEE-----------ecCCHHHHHHHHHCCCEEec
Q 026503 174 GRILLSAVAKQAVKMGYGRVEWIV-----------LDWNVNAIKFYEEMGAKVLS 217 (237)
Q Consensus 174 g~~ll~~~~~~a~~~g~~~i~~~v-----------~~~n~~a~~~y~k~GF~~~~ 217 (237)
+....+.+.+.+.++|+..+.+.+ -.+.+.+++...+.|+++..
T Consensus 74 Aq~aa~~~a~k~~~~Gi~~v~V~vr~~gg~~~kg~GpGr~~airaL~~~glkI~~ 128 (149)
T PTZ00129 74 AMMAAQDVAARCKELGINALHIKLRATGGVRTKTPGPGAQAALRALARAGLKIGR 128 (149)
T ss_pred HHHHHHHHHHHHHHcCCeEEEEEEEecCCCCCCCCCCCHHHHHHHHHHCCCEEEE
Confidence 445566677778889999999888 46678999999999999865
No 156
>PF04339 DUF482: Protein of unknown function, DUF482; InterPro: IPR007434 This family contains several proteins of uncharacterised function.
Probab=33.20 E-value=3.5e+02 Score=23.97 Aligned_cols=89 Identities=12% Similarity=0.003 Sum_probs=55.2
Q ss_pred EEEEecCCCccEEEEEEEecCCcccCCCCceEEEEEEEccchhcCChHHHHHHHHHHHHHHhCCcEEEEEEecCCHHHHH
Q 026503 127 TFASDETHDVTVAGFVLFFPNYSTFLAKPGFYIEDIFVRECYRRKGFGRILLSAVAKQAVKMGYGRVEWIVLDWNVNAIK 206 (237)
Q Consensus 127 ~~~~~~~~~~~vvG~~~~~~~~~~~~~~~~~~i~~~~V~p~~rg~Gig~~ll~~~~~~a~~~g~~~i~~~v~~~n~~a~~ 206 (237)
++++.. +|++||++.+....++ ++-...+...++.+. .-..+.-..+++|.++|+..+........
T Consensus 253 l~~A~~--~g~~Va~aL~l~~~~~------LyGRYwG~~~~~~~L-HFe~cYYq~Ie~aI~~Gl~~f~~GaqGEH----- 318 (370)
T PF04339_consen 253 LVVARR--DGQPVAFALCLRGDDT------LYGRYWGCDEEIPFL-HFELCYYQGIEYAIEHGLRRFEPGAQGEH----- 318 (370)
T ss_pred EEEEEE--CCeEEEEEEEEEeCCE------EEEeeecccccccCc-chHHHHHHHHHHHHHcCCCEEECCcchhH-----
Confidence 444555 4599999999876543 333333334444322 23345667899999999999855433222
Q ss_pred HHHHCCCEEeceEEEEeecchHHh
Q 026503 207 FYEEMGAKVLSEWRICRLTGDALD 230 (237)
Q Consensus 207 ~y~k~GF~~~~~~~~~~~~~~~~~ 230 (237)
=...||+++..+....+-.-.+.
T Consensus 319 -K~~RGf~P~~t~S~H~~~~~~~~ 341 (370)
T PF04339_consen 319 -KIARGFEPVPTYSAHWIADPRFR 341 (370)
T ss_pred -HHHcCCccccceeeeeeCChhHH
Confidence 24689999988876665544443
No 157
>cd07267 THT_Oxygenase_N N-terminal domain of 2,4,5-trihydroxytoluene (THT) oxygenase. This subfamily contains the N-terminal, non-catalytic, domain of THT oxygenase. THT oxygenase is an extradiol dioxygenase in the 2,4-dinitrotoluene (DNT) degradation pathway. It catalyzes the conversion of 2,4,5-trihydroxytoluene to an unstable ring fission product, 2,4-dihydroxy-5-methyl-6-oxo-2,4-hexadienoic acid. The native protein was determined to be a dimer by gel filtration. The enzyme belongs to the type I family of extradiol dioxygenases which contains two structurally homologous barrel-shaped domains at the N- and C-terminus of each monomer. The active-site metal is located in the C-terminal barrel. Fe(II) is required for its catalytic activity.
Probab=32.93 E-value=39 Score=23.54 Aligned_cols=26 Identities=23% Similarity=0.317 Sum_probs=17.5
Q ss_pred cEEEEEEecCCHHHHHHHHHCCCEEec
Q 026503 191 GRVEWIVLDWNVNAIKFYEEMGAKVLS 217 (237)
Q Consensus 191 ~~i~~~v~~~n~~a~~~y~k~GF~~~~ 217 (237)
..+.+.|.. -.++.+||..+||+...
T Consensus 5 ~hv~l~v~D-l~~s~~FY~~lGl~~~~ 30 (113)
T cd07267 5 AHVRFEHPD-LDKAERFLTDFGLEVAA 30 (113)
T ss_pred EEEEEccCC-HHHHHHHHHHcCCEEEE
Confidence 344444332 35899999999998764
No 158
>PF10566 Glyco_hydro_97: Glycoside hydrolase 97 ; InterPro: IPR019563 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This is the 97th family of glycosidases, in this case bacterial. The central part of the GH97 family protein sequences represents a typical and complete (beta/alpha)8-barrel or catalytic TIM-barrel type domain. The N- and C-terminal parts of the sequences, mainly consisting of beta-strands, most probably form two additional non-catalytic domains with as yet unknown functions. The non-catalytic domains of glycosidases from the alpha-galactosidase and alpha-glucosidase superfamilies are also predominantly composed of beta-strands, and at least some of these domains are involved in oligomerisation and carbohydrate binding. In all known glycosidases with the (beta-alpha)8-barrel fold, the amino acid residues at the active site are located on the C-termini of the beta-strands []. ; PDB: 2JKP_A 2JKE_A 2D73_B 2ZQ0_B 2JKA_A 3A24_A.
Probab=32.37 E-value=98 Score=26.12 Aligned_cols=56 Identities=20% Similarity=0.200 Sum_probs=35.3
Q ss_pred EEEEccchhc----------CChHHHHHHHHHHHHHHhCCcEEEEEEecCC-----------HHHHHHHHHCCCEEec
Q 026503 161 DIFVRECYRR----------KGFGRILLSAVAKQAVKMGYGRVEWIVLDWN-----------VNAIKFYEEMGAKVLS 217 (237)
Q Consensus 161 ~~~V~p~~rg----------~Gig~~ll~~~~~~a~~~g~~~i~~~v~~~n-----------~~a~~~y~k~GF~~~~ 217 (237)
.+.|+..+.+ +.+...-|..++++|+++|.. |.+++.... ....+.|++.|-+=++
T Consensus 48 YvlvD~GW~~~~~~~~~d~~~~~~~~dl~elv~Ya~~KgVg-i~lw~~~~~~~~~~~~~~~~~~~f~~~~~~Gv~GvK 124 (273)
T PF10566_consen 48 YVLVDAGWYGWEKDDDFDFTKPIPDFDLPELVDYAKEKGVG-IWLWYHSETGGNVANLEKQLDEAFKLYAKWGVKGVK 124 (273)
T ss_dssp EEEEBTTCCGS--TTT--TT-B-TT--HHHHHHHHHHTT-E-EEEEEECCHTTBHHHHHCCHHHHHHHHHHCTEEEEE
T ss_pred EEEeccccccccccccccccccCCccCHHHHHHHHHHcCCC-EEEEEeCCcchhhHhHHHHHHHHHHHHHHcCCCEEe
Confidence 3445666654 345667889999999998865 445555544 6778889999876543
No 159
>PRK00756 acyltransferase NodA; Provisional
Probab=32.05 E-value=1.1e+02 Score=23.95 Aligned_cols=41 Identities=15% Similarity=-0.065 Sum_probs=30.8
Q ss_pred ceEEEEEEEccchhcCChHHHHHHHHHHHHHHhCCcEEEEEE
Q 026503 156 GFYIEDIFVRECYRRKGFGRILLSAVAKQAVKMGYGRVEWIV 197 (237)
Q Consensus 156 ~~~i~~~~V~p~~rg~Gig~~ll~~~~~~a~~~g~~~i~~~v 197 (237)
..+++...|.|+..|.||+..| ..+.-...+.|.....-.|
T Consensus 85 VaElGLygVRpDLEGlGi~~S~-r~m~PvLq~LgVPF~FGtV 125 (196)
T PRK00756 85 VAELGLYGVRPDLEGLGIAHSI-RAMYPVLQELGVPFAFGTV 125 (196)
T ss_pred EEEeeeeeeccccccccchhhH-HHHHHHHHhcCCCeecccc
Confidence 3578888999999999998876 5666666777877664444
No 160
>TIGR03628 arch_S11P archaeal ribosomal protein S11P. This model describes exclusively the archaeal ribosomal protein S11P. It excludes homologous ribosomal proteins S14 from eukaryotes and S11 from bacteria.
Probab=31.83 E-value=2e+02 Score=20.81 Aligned_cols=44 Identities=16% Similarity=0.076 Sum_probs=34.7
Q ss_pred HHHHHHHHHHHHHHhCCcEEEEEEec-----------CCHHHHHHHHHCCCEEec
Q 026503 174 GRILLSAVAKQAVKMGYGRVEWIVLD-----------WNVNAIKFYEEMGAKVLS 217 (237)
Q Consensus 174 g~~ll~~~~~~a~~~g~~~i~~~v~~-----------~n~~a~~~y~k~GF~~~~ 217 (237)
+....+.+.+.+.++|++.+.+.+.- ..+.+++-..+.|+++..
T Consensus 48 Aq~aa~~~~~~~~~~Gi~~v~v~ikG~gg~~~~~~G~Gr~~air~l~~~glkI~~ 102 (114)
T TIGR03628 48 AMQAAGRAAEKAKERGITGLHIKVRAPGGNGQKSPGPGAQAAIRALARAGLRIGR 102 (114)
T ss_pred HHHHHHHHHHHHHHcCCcEEEEEEEecCCCCCCCCCCcHHHHHHHHHHCCCEEEE
Confidence 34566677778888999999887744 557899999999999764
No 161
>cd08342 HPPD_N_like N-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HPPD) and hydroxymandelate Synthase (HmaS). HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of HPP to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two, instead of three, su
Probab=31.67 E-value=78 Score=22.89 Aligned_cols=27 Identities=15% Similarity=0.272 Sum_probs=18.8
Q ss_pred EEEEEEecCCHHHHHHHHH-CCCEEeceE
Q 026503 192 RVEWIVLDWNVNAIKFYEE-MGAKVLSEW 219 (237)
Q Consensus 192 ~i~~~v~~~n~~a~~~y~k-~GF~~~~~~ 219 (237)
++.+.| .+-..+++||++ +||+...+.
T Consensus 3 Hi~i~V-~D~e~s~~FY~~vLGf~~~~~~ 30 (136)
T cd08342 3 HVEFYV-GNAKQLASWFSTKLGFEPVAYH 30 (136)
T ss_pred EEEEEe-CCHHHHHHHHHHhcCCeEEEec
Confidence 344444 334689999988 999987543
No 162
>cd08346 PcpA_N_like N-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins. The N-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.
Probab=30.66 E-value=73 Score=22.04 Aligned_cols=27 Identities=19% Similarity=0.455 Sum_probs=17.8
Q ss_pred cEEEEEEecCCHHHHHHHHH-CCCEEece
Q 026503 191 GRVEWIVLDWNVNAIKFYEE-MGAKVLSE 218 (237)
Q Consensus 191 ~~i~~~v~~~n~~a~~~y~k-~GF~~~~~ 218 (237)
..+.+.| .+-..+++||.+ +||+...+
T Consensus 3 ~hv~l~v-~d~~~a~~FY~~~lG~~~~~~ 30 (126)
T cd08346 3 HHVTLIT-RDAQETVDFYTDVLGLRLVKK 30 (126)
T ss_pred ccEEEEc-CChhHhHHHHHHccCCEEeee
Confidence 3454443 233589999975 89998754
No 163
>PRK09607 rps11p 30S ribosomal protein S11P; Reviewed
Probab=29.78 E-value=2.4e+02 Score=21.03 Aligned_cols=44 Identities=18% Similarity=0.086 Sum_probs=34.5
Q ss_pred HHHHHHHHHHHHHHhCCcEEEEEEec-----------CCHHHHHHHHHCCCEEec
Q 026503 174 GRILLSAVAKQAVKMGYGRVEWIVLD-----------WNVNAIKFYEEMGAKVLS 217 (237)
Q Consensus 174 g~~ll~~~~~~a~~~g~~~i~~~v~~-----------~n~~a~~~y~k~GF~~~~ 217 (237)
+....+.+.+.+.++|+..+.+.+-- +.+.+++...+.|+++..
T Consensus 55 Aq~aae~~~~~~~~~Gi~~v~v~vkG~Ggn~~~~~G~Gr~~airal~~~glkI~~ 109 (132)
T PRK09607 55 AMQAAEKAAEDAKEKGITGVHIKVRAPGGNGQKSPGPGAQAAIRALARAGLRIGR 109 (132)
T ss_pred HHHHHHHHHHHHHHcCCcEEEEEEEecCCCCCcCCCCcHHHHHHHHHHCCCEEEE
Confidence 34566667777888999999887654 457899999999999765
No 164
>cd08344 MhqB_like_N N-terminal domain of MhqB, a type I extradiol dioxygenase, and similar proteins. This subfamily contains the N-terminal, non-catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.
Probab=29.45 E-value=49 Score=22.88 Aligned_cols=26 Identities=27% Similarity=0.210 Sum_probs=17.7
Q ss_pred cEEEEEEecCCHHHHHHHHHCCCEEec
Q 026503 191 GRVEWIVLDWNVNAIKFYEEMGAKVLS 217 (237)
Q Consensus 191 ~~i~~~v~~~n~~a~~~y~k~GF~~~~ 217 (237)
..+.+.|. +=.++.+||..+||+...
T Consensus 4 ~hv~l~v~-d~~~s~~FY~~lG~~~~~ 29 (112)
T cd08344 4 DHFALEVP-DLEVARRFYEAFGLDVRE 29 (112)
T ss_pred eEEEEecC-CHHHHHHHHHHhCCcEEe
Confidence 34443332 235899999999999864
No 165
>COG0807 RibA GTP cyclohydrolase II [Coenzyme metabolism]
Probab=27.94 E-value=1.4e+02 Score=23.84 Aligned_cols=49 Identities=20% Similarity=0.244 Sum_probs=36.5
Q ss_pred EEEccchhcCChHHHHHHHHHHHHHHhCCcEEEEEEecCCHHHHHHHHHCCCEEeceE
Q 026503 162 IFVRECYRRKGFGRILLSAVAKQAVKMGYGRVEWIVLDWNVNAIKFYEEMGAKVLSEW 219 (237)
Q Consensus 162 ~~V~p~~rg~Gig~~ll~~~~~~a~~~g~~~i~~~v~~~n~~a~~~y~k~GF~~~~~~ 219 (237)
+.-.+++|.-|||.+++..+ |+..+.+.+ +|+.-..-.+..|-+++...
T Consensus 120 lg~~~D~R~ygigAqIL~dL-------GI~~irLLt--nnp~K~~~l~~~Gi~vverv 168 (193)
T COG0807 120 LGFPADERDYGIGAQILKDL-------GIKKIRLLT--NNPRKIYGLEGFGINVVERV 168 (193)
T ss_pred hcCCchHHHHHHHHHHHHHc-------CCcEEEEec--CChHHHHHHHhCCceEEEEe
Confidence 34467888889999888744 899986554 48877777788887777654
No 166
>COG1212 KdsB CMP-2-keto-3-deoxyoctulosonic acid synthetase [Cell envelope biogenesis, outer membrane]
Probab=27.71 E-value=1.6e+02 Score=24.23 Aligned_cols=42 Identities=24% Similarity=0.333 Sum_probs=32.5
Q ss_pred HHHHHHHHHHHHHHhCCcEEEEEEecCCHHHHHHHHHCCCEEec
Q 026503 174 GRILLSAVAKQAVKMGYGRVEWIVLDWNVNAIKFYEEMGAKVLS 217 (237)
Q Consensus 174 g~~ll~~~~~~a~~~g~~~i~~~v~~~n~~a~~~y~k~GF~~~~ 217 (237)
|+-|+.+..+.+.+.|...++ |..+++.-...-+++|++.+-
T Consensus 27 GkpmI~rV~e~a~~s~~~rvv--VATDde~I~~av~~~G~~avm 68 (247)
T COG1212 27 GKPMIVRVAERALKSGADRVV--VATDDERIAEAVQAFGGEAVM 68 (247)
T ss_pred CchHHHHHHHHHHHcCCCeEE--EEcCCHHHHHHHHHhCCEEEe
Confidence 557888888888888888874 566677777788888888763
No 167
>KOG2675 consensus Adenylate cyclase-associated protein (CAP/Srv2p) [Cytoskeleton; Signal transduction mechanisms]
Probab=27.39 E-value=95 Score=27.96 Aligned_cols=17 Identities=12% Similarity=-0.029 Sum_probs=10.0
Q ss_pred ccCCCChhHHHHHHHHH
Q 026503 36 LATPADVPHIHKLIHQM 52 (237)
Q Consensus 36 ~~~~~D~~~l~~l~~~~ 52 (237)
.....+..+|.+-+++-
T Consensus 258 ~~~k~~~~AlFaqlNqG 274 (480)
T KOG2675|consen 258 DANKGGRGALFAQLNQG 274 (480)
T ss_pred ccccccHHHHHHHHhcc
Confidence 34566666666666553
No 168
>KOG1472 consensus Histone acetyltransferase SAGA/ADA, catalytic subunit PCAF/GCN5 and related proteins [Chromatin structure and dynamics; Transcription]
Probab=26.55 E-value=15 Score=35.17 Aligned_cols=98 Identities=17% Similarity=0.117 Sum_probs=66.4
Q ss_pred chhhhcccCCCCCCCcEEEEecCCCccEEEEEEEecCCcccCCCCceEEEEEEEccchhcCChHHHHHHHHHHHHHHhC-
Q 026503 111 DRIVYLDLPLDDPDRETFASDETHDVTVAGFVLFFPNYSTFLAKPGFYIEDIFVRECYRRKGFGRILLSAVAKQAVKMG- 189 (237)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~vvG~~~~~~~~~~~~~~~~~~i~~~~V~p~~rg~Gig~~ll~~~~~~a~~~g- 189 (237)
-..+++.....+...+.+....++- .+||.+++.+... +....+....|.-+.|-+|.|..++..+.++.+...
T Consensus 405 mpkEyi~rlv~d~~h~~~~~~~d~~-g~vggi~~r~f~~----k~f~eivf~av~~~eqv~g~g~hlmnhlkd~~~~~~~ 479 (720)
T KOG1472|consen 405 MPKEYISRLVFDTSHHVMARIKDNE-GVVGGICFRPFPE----KGFTEIVFCAVTTDEQVKGSGTHLMNHLKDYVRSSST 479 (720)
T ss_pred chHHHHHhhccccccccceeecccc-ccccccccCcCcc----cCCcceeeccccCcccccccCcCchhhHHHHhhccch
Confidence 3455566666677666666654432 3888888876543 233556678899999999999999999999988764
Q ss_pred CcEEEEEEecCCHHHHHHHHHCCCEEe
Q 026503 190 YGRVEWIVLDWNVNAIKFYEEMGAKVL 216 (237)
Q Consensus 190 ~~~i~~~v~~~n~~a~~~y~k~GF~~~ 216 (237)
+... .+.. ...++-.+++.||...
T Consensus 480 i~~~--ltya-d~~aigyfkkqgfs~e 503 (720)
T KOG1472|consen 480 IDYA--LTYA-DEGAIGYFKKQGFSKE 503 (720)
T ss_pred HHHH--HHhh-hhcccccccCccchhh
Confidence 3333 1222 3366677788888654
No 169
>PRK10150 beta-D-glucuronidase; Provisional
Probab=26.50 E-value=4.2e+02 Score=24.92 Aligned_cols=83 Identities=14% Similarity=0.120 Sum_probs=56.9
Q ss_pred EEEEEEEecCCccc-CCCCceEEEEEEEccchh--cCChHHHHHHHHHHHHHHhCCcEEEEEEecCCHHHHHHHHHCCCE
Q 026503 138 VAGFVLFFPNYSTF-LAKPGFYIEDIFVRECYR--RKGFGRILLSAVAKQAVKMGYGRVEWIVLDWNVNAIKFYEEMGAK 214 (237)
Q Consensus 138 vvG~~~~~~~~~~~-~~~~~~~i~~~~V~p~~r--g~Gig~~ll~~~~~~a~~~g~~~i~~~v~~~n~~a~~~y~k~GF~ 214 (237)
.+|+=.+......+ .+...+.+.+++.++++- |.++....+..-++.+++.|+..|++.-....+....+.-++|+-
T Consensus 272 ~~GfR~i~~~~~~f~lNG~pv~lrG~~~h~~~~~~G~a~~~~~~~~d~~l~K~~G~N~vR~sh~p~~~~~~~~cD~~Gll 351 (604)
T PRK10150 272 RFGIRSVAVKGGQFLINGKPFYFKGFGKHEDADIRGKGLDEVLNVHDHNLMKWIGANSFRTSHYPYSEEMLDLADRHGIV 351 (604)
T ss_pred eeEEEEEEEeCCEEEECCEEEEEEeeeccCCCCccCCcCCHHHHHHHHHHHHHCCCCEEEeccCCCCHHHHHHHHhcCcE
Confidence 35555554433222 222346677777776654 445566677777788999999999986555677888888999999
Q ss_pred EeceEE
Q 026503 215 VLSEWR 220 (237)
Q Consensus 215 ~~~~~~ 220 (237)
+..|..
T Consensus 352 V~~E~p 357 (604)
T PRK10150 352 VIDETP 357 (604)
T ss_pred EEEecc
Confidence 998764
No 170
>PF00925 GTP_cyclohydro2: GTP cyclohydrolase II; InterPro: IPR000926 GTP cyclohydrolase II catalyses the first committed step in the biosynthesis of riboflavin. The enzyme converts GTP and water to formate, 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)- pyrimidine and pyrophosphate, and requires magnesium as a cofactor. It is sometimes found as a bifunctional enzyme with 3,4-dihydroxy-2-butanone 4-phosphate synthase (DHBP_synthase) IPR000422 from INTERPRO. ; GO: 0003935 GTP cyclohydrolase II activity, 0009231 riboflavin biosynthetic process; PDB: 2BZ0_B 2BZ1_A.
Probab=25.84 E-value=1.1e+02 Score=23.59 Aligned_cols=45 Identities=24% Similarity=0.350 Sum_probs=23.7
Q ss_pred cchhcCChHHHHHHHHHHHHHHhCCcEEEEEEecCCHHHHHHHHHCCCEEeceE
Q 026503 166 ECYRRKGFGRILLSAVAKQAVKMGYGRVEWIVLDWNVNAIKFYEEMGAKVLSEW 219 (237)
Q Consensus 166 p~~rg~Gig~~ll~~~~~~a~~~g~~~i~~~v~~~n~~a~~~y~k~GF~~~~~~ 219 (237)
.++|.-|+|.++|+ ..|++++. ..++|+......+.+|-++++..
T Consensus 123 ~d~R~ygigaqIL~-------dLGV~~~r--LLtnnp~k~~~L~g~gleV~~~v 167 (169)
T PF00925_consen 123 EDLRDYGIGAQILR-------DLGVKKMR--LLTNNPRKYVALEGFGLEVVERV 167 (169)
T ss_dssp S----THHHHHHHH-------HTT--SEE--EE-S-HHHHHHHHHTT--EEEEE
T ss_pred cccccHHHHHHHHH-------HcCCCEEE--ECCCChhHHHHHhcCCCEEEEEe
Confidence 34455555555544 45788774 45567888888899998887754
No 171
>COG2348 Peptidoglycan interpeptide bridge formation enzyme [Cell wall/membrane/envelope biogenesis]
Probab=25.34 E-value=5.1e+02 Score=23.40 Aligned_cols=53 Identities=15% Similarity=0.020 Sum_probs=41.0
Q ss_pred chhcCChHHHHHHHHHHHHHHhCCcEEEEEE---------------ecCCHHHHHHHHHCCCEEeceE
Q 026503 167 CYRRKGFGRILLSAVAKQAVKMGYGRVEWIV---------------LDWNVNAIKFYEEMGAKVLSEW 219 (237)
Q Consensus 167 ~~rg~Gig~~ll~~~~~~a~~~g~~~i~~~v---------------~~~n~~a~~~y~k~GF~~~~~~ 219 (237)
+|-++.+-..+++.+.+++++.++-.+.+.. ...|...++.+..+|++..+-.
T Consensus 78 dy~~~~l~~~~~k~l~~y~k~~~~l~i~idP~l~~~~~~~~~~~~~~~~n~~~i~~l~~lG~k~~g~t 145 (418)
T COG2348 78 DYSNQELLDYFIKELKKYAKSKRALFIKIDPYLVYQQFDLGGEIIENYNNLAIIKLLKDLGYKHSGFT 145 (418)
T ss_pred cccchHHHHHHHHHHHHHHhhccceEEEeccchhhhcccCCCccccCcchHHHHHHHHHhhhhhcCcc
Confidence 8888999999999999999987665543211 1456889999999999987643
No 172
>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]
Probab=25.20 E-value=1.1e+02 Score=26.68 Aligned_cols=58 Identities=17% Similarity=0.083 Sum_probs=34.7
Q ss_pred hcCChHHHHHHHHHHHHHHhCCcEEEEEEecCCHHHHHHHHHCCCEEeceEEEEeecchHHh
Q 026503 169 RRKGFGRILLSAVAKQAVKMGYGRVEWIVLDWNVNAIKFYEEMGAKVLSEWRICRLTGDALD 230 (237)
Q Consensus 169 rg~Gig~~ll~~~~~~a~~~g~~~i~~~v~~~n~~a~~~y~k~GF~~~~~~~~~~~~~~~~~ 230 (237)
-|.|--+.--+.+..+... +.+++.- ..=+.-..+|+|.||..+.++.+|..+.+.+|
T Consensus 107 sGTGAl~~~A~Fl~~~~~~---~~VY~Sn-PTW~nH~~if~~aGf~tv~~Y~yWd~~~k~~d 164 (410)
T KOG1412|consen 107 SGTGALRIAADFLATFYNK---NTVYVSN-PTWENHHAIFEKAGFTTVATYPYWDAENKCVD 164 (410)
T ss_pred cccchhhhhHHHHHHhccc---ceeEecC-CchhHHHHHHHHcCCceeeeeeeecCCCceec
Confidence 4555444444444444332 2343321 11124557999999999999999987776655
No 173
>PF04555 XhoI: Restriction endonuclease XhoI; InterPro: IPR007636 There are four classes of restriction endonucleases: types I, II,III and IV. All types of enzymes recognise specific short DNA sequences and carry out the endonucleolytic cleavage of DNA to give specific double-stranded fragments with terminal 5'-phosphates. They differ in their recognition sequence, subunit composition, cleavage position, and cofactor requirements [, ], as summarised below: Type I enzymes (3.1.21.3 from EC) cleave at sites remote from recognition site; require both ATP and S-adenosyl-L-methionine to function; multifunctional protein with both restriction and methylase (2.1.1.72 from EC) activities. Type II enzymes (3.1.21.4 from EC) cleave within or at short specific distances from recognition site; most require magnesium; single function (restriction) enzymes independent of methylase. Type III enzymes (3.1.21.5 from EC) cleave at sites a short distance from recognition site; require ATP (but doesn't hydrolyse it); S-adenosyl-L-methionine stimulates reaction but is not required; exists as part of a complex with a modification methylase methylase (2.1.1.72 from EC). Type IV enzymes target methylated DNA. Type II restriction endonucleases (3.1.21.4 from EC) are components of prokaryotic DNA restriction-modification mechanisms that protect the organism against invading foreign DNA. These site-specific deoxyribonucleases catalyse the endonucleolytic cleavage of DNA to give specific double-stranded fragments with terminal 5'-phosphates. Of the 3000 restriction endonucleases that have been characterised, most are homodimeric or tetrameric enzymes that cleave target DNA at sequence-specific sites close to the recognition site. For homodimeric enzymes, the recognition site is usually a palindromic sequence 4-8 bp in length. Most enzymes require magnesium ions as a cofactor for catalysis. Although they can vary in their mode of recognition, many restriction endonucleases share a similar structural core comprising four beta-strands and one alpha-helix, as well as a similar mechanism of cleavage, suggesting a common ancestral origin []. However, there is still considerable diversity amongst restriction endonucleases [, ]. The target site recognition process triggers large conformational changes of the enzyme and the target DNA, leading to the activation of the catalytic centres. Like other DNA binding proteins, restriction enzymes are capable of non-specific DNA binding as well, which is the prerequisite for efficient target site location by facilitated diffusion. Non-specific binding usually does not involve interactions with the bases but only with the DNA backbone []. This entry represents type II restriction enzymes such as XhoI (3.1.21.4 from EC), which recognises the double-stranded sequence CTCGAG and cleave after C-1 [].; GO: 0003677 DNA binding, 0009036 Type II site-specific deoxyribonuclease activity, 0009307 DNA restriction-modification system
Probab=25.04 E-value=2.1e+02 Score=22.77 Aligned_cols=38 Identities=8% Similarity=-0.011 Sum_probs=28.8
Q ss_pred EEEEccchhcCChHHHHHHHHHHHHHHhCCcEEEEEEe
Q 026503 161 DIFVRECYRRKGFGRILLSAVAKQAVKMGYGRVEWIVL 198 (237)
Q Consensus 161 ~~~V~p~~rg~Gig~~ll~~~~~~a~~~g~~~i~~~v~ 198 (237)
.+-|+|+|+|..+.++.--.+.+...+.-|....+...
T Consensus 144 hFpv~p~F~g~SY~~Ry~ilc~rLv~e~lY~aa~l~~s 181 (196)
T PF04555_consen 144 HFPVDPEFKGASYLKRYEILCERLVQERLYTAACLITS 181 (196)
T ss_pred CCCccHHhcCCcHHHHHHHHHHHHHHhcccceeEEEEe
Confidence 35689999999999988777777777776666655443
No 174
>PF00903 Glyoxalase: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily This Prosite is specific to glyoxalases This Prosite is specific to Extradiol ring-cleavage dioxygenases This prints entry is specific to bleomycin resistance protein.; InterPro: IPR004360 Glyoxalase I (4.4.1.5 from EC) (lactoylglutathione lyase) catalyzes the first step of the glyoxal pathway. S-lactoylglutathione is then converted by glyoxalase II to lactic acid []. Glyoxalase I is an ubiquitous enzyme which binds one mole of zinc per subunit. The bacterial and yeast enzymes are monomeric while the mammalian one is homodimeric. The sequence of glyoxalase I is well conserved. The domain represented by this entry is found in glyoxalase I and in other related proteins, including fosfomycin resistance proteins FosB [], FosA [], FosX [] and dioxygenases (eg. 4-hydroxyphenylpyruvate dioxygenase).; PDB: 1CJX_A 1NPB_E 3OJT_C 3OJN_A 2IG9_B 3OJJ_B 3OJK_D 1Q0C_D 1F1X_C 3BZA_B ....
Probab=24.73 E-value=75 Score=21.89 Aligned_cols=29 Identities=28% Similarity=0.454 Sum_probs=19.5
Q ss_pred cEEEEEEecCCHHHHHHHHH-CCCEEeceEE
Q 026503 191 GRVEWIVLDWNVNAIKFYEE-MGAKVLSEWR 220 (237)
Q Consensus 191 ~~i~~~v~~~n~~a~~~y~k-~GF~~~~~~~ 220 (237)
..+.+.|.. -..+++||.+ +||+.+....
T Consensus 3 ~Hi~i~v~d-~~~~~~FY~~~lG~~~~~~~~ 32 (128)
T PF00903_consen 3 DHIAIRVKD-LEKAIDFYTDVLGFRLVEESD 32 (128)
T ss_dssp EEEEEEESC-HHHHHHHHHHTTTSEEEEEEE
T ss_pred EEEEEEcCC-HHHHHHHHHHHhCCcEEeeec
Confidence 344444333 2489999965 9999987665
No 175
>PF12681 Glyoxalase_2: Glyoxalase-like domain; PDB: 3G12_B 1JIF_B 1JIE_B 1QTO_A 3OXH_A 2PJS_A 2RBB_A 3SK1_B 3SK2_B 3RRI_A ....
Probab=24.52 E-value=75 Score=21.41 Aligned_cols=17 Identities=35% Similarity=0.657 Sum_probs=14.7
Q ss_pred HHHHHHHHH-CCCEEece
Q 026503 202 VNAIKFYEE-MGAKVLSE 218 (237)
Q Consensus 202 ~~a~~~y~k-~GF~~~~~ 218 (237)
..+++||++ +||+...+
T Consensus 7 ~~a~~FY~~~lg~~~~~~ 24 (108)
T PF12681_consen 7 EAAAAFYEDVLGFEVVFD 24 (108)
T ss_dssp HHHHHHHHHTTTSEEEEE
T ss_pred HHHHHHHHHhcCCEEEEe
Confidence 589999987 99999874
No 176
>PF05063 MT-A70: MT-A70 ; InterPro: IPR007757 N6-methyladenosine (m6A) is present at internal sites in eukaryotic mRNA. It is present only within a defined sequence context that has been shown to be conserved across species from plants to man. Despite its ubiquity and conserved sequence specificity, the functional significance of this modification remains a mystery [], []. MT-A70 is the S-adenosylmethionine-binding subunit of human mRNA N6-adenosine-methyltransferase (MTase), an enzyme that sequence-specifically methylates adenines in pre-mRNAs. Proteins with sequence similarity to MT-A70 have been identified in eukaryotes and prokaryotes. The resulting family is defined by sequence similarity in the carboxyl-proximal regions of the respective proteins. The amino-proximal regions of the eukaryotic proteins are highly diverse, often Pro-rich, and are conserved only within individual subfamilies []. Corresponding regions are not present in prokaryotic members of the family. MT-A70-like proteins contain examples of some of the consensus methyltransferase motifs that have been derived from mutational and structural studies of bacterial DNA methyltransferases, including the universally conserved motif IV catalytic residues and a proposed motif I (AdoMet binding) element []. The MT-A70-like family comprises four subfamilies with varying degrees of interrelatedness. One subfamily is a small group of bacterial DNA: m6A MTases. The other three are paralogous eukaryotic lineages, two of which have not been associated with MTase activity but include proteins that regulate mRNA levels via unknown mechanisms apparently not involving methylation []. Some proteins known to belong to the MT-A70-like family are listed below: Human N6-adenosine-methyltransferase 70 kDa subunit (MT-A70) (2.1.1.62 from EC). Yeast N6-adenosine-methyltransferase IME4 (2.1.1.62 from EC), which is important for induction of sporulation. Yeast karyogamy protein KAR4, a phosphoprotein required for expression of karyogamy-specific genes during mating and that it also acts during mitosis and meiosis. It has been suggested that KAR4 is inactive for methyltransfer and may not even bind AdoMet. ; GO: 0008168 methyltransferase activity, 0006139 nucleobase-containing compound metabolic process
Probab=24.29 E-value=2.5e+02 Score=21.57 Aligned_cols=30 Identities=17% Similarity=0.398 Sum_probs=22.2
Q ss_pred EEecCCHHH-HHHHHHCCCEEeceEEEEeec
Q 026503 196 IVLDWNVNA-IKFYEEMGAKVLSEWRICRLT 225 (237)
Q Consensus 196 ~v~~~n~~a-~~~y~k~GF~~~~~~~~~~~~ 225 (237)
.+......+ .+++++.||+.+.++.-..++
T Consensus 52 vTn~~~~~~~~~l~~~WGf~~~~~~~WvK~~ 82 (176)
T PF05063_consen 52 VTNSQLPEAKLELFPAWGFEYVTEWVWVKIT 82 (176)
T ss_pred eccchhhHHHHHHHHhCCCEEEEEEEEEEec
Confidence 334444567 899999999999987655555
No 177
>PF02836 Glyco_hydro_2_C: Glycosyl hydrolases family 2, TIM barrel domain; InterPro: IPR006103 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 2 GH2 from CAZY comprises enzymes with several known activities; beta-galactosidase (3.2.1.23 from EC); beta-mannosidase (3.2.1.25 from EC); beta-glucuronidase (3.2.1.31 from EC). These enzymes contain a conserved glutamic acid residue which has been shown [], in Escherichia coli lacZ (P00722 from SWISSPROT), to be the general acid/base catalyst in the active site of the enzyme. Beta-galactosidase from E. coli has a TIM-barrel-like core surrounded by four other largely beta domains [].; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3CMG_A 3FN9_C 1YQ2_A 3K4D_B 3LPG_B 3LPF_A 3K4A_B 3K46_B 3GM8_A 3DEC_A ....
Probab=23.94 E-value=2.6e+02 Score=23.40 Aligned_cols=65 Identities=12% Similarity=0.172 Sum_probs=41.4
Q ss_pred eEEEEEEEccchhcCC--hHHHHHHHHHHHHHHhCCcEEEEEEecCCHHHHHHHHHCCCEEeceEEE
Q 026503 157 FYIEDIFVRECYRRKG--FGRILLSAVAKQAVKMGYGRVEWIVLDWNVNAIKFYEEMGAKVLSEWRI 221 (237)
Q Consensus 157 ~~i~~~~V~p~~rg~G--ig~~ll~~~~~~a~~~g~~~i~~~v~~~n~~a~~~y~k~GF~~~~~~~~ 221 (237)
+.|.++.-++.+-+.| +-...+..=+..+++.|+..|++.-....+.-..+..++|+-+..+...
T Consensus 15 ~~l~Gv~~h~~~~~~g~a~~~~~~~~d~~l~k~~G~N~iR~~h~p~~~~~~~~cD~~GilV~~e~~~ 81 (298)
T PF02836_consen 15 IFLRGVNRHQDYPGLGRAMPDEAMERDLELMKEMGFNAIRTHHYPPSPRFYDLCDELGILVWQEIPL 81 (298)
T ss_dssp E-EEEEEE-S-BTTTBT---HHHHHHHHHHHHHTT-SEEEETTS--SHHHHHHHHHHT-EEEEE-S-
T ss_pred EEEEEEeeCcCcccccccCCHHHHHHHHHHHHhcCcceEEcccccCcHHHHHHHhhcCCEEEEeccc
Confidence 5666777666654443 4556777777789999999999865566678888889999999887644
No 178
>KOG2675 consensus Adenylate cyclase-associated protein (CAP/Srv2p) [Cytoskeleton; Signal transduction mechanisms]
Probab=23.92 E-value=61 Score=29.15 Aligned_cols=18 Identities=17% Similarity=0.104 Sum_probs=9.5
Q ss_pred cCCCChhHHHHHHHHHHH
Q 026503 37 ATPADVPHIHKLIHQMAV 54 (237)
Q Consensus 37 ~~~~D~~~l~~l~~~~~~ 54 (237)
...++-..+-.++.++..
T Consensus 256 ~~~~~k~~~~AlFaqlNq 273 (480)
T KOG2675|consen 256 SSDANKGGRGALFAQLNQ 273 (480)
T ss_pred CcccccccHHHHHHHHhc
Confidence 444555555555555543
No 179
>PF04015 DUF362: Domain of unknown function (DUF362) ; InterPro: IPR007160 This domain is found in some iron-sulphur proteins.
Probab=23.79 E-value=1.2e+02 Score=23.90 Aligned_cols=57 Identities=11% Similarity=0.103 Sum_probs=39.3
Q ss_pred ChHHHHHHHHHHHHHHhCCcEEEEEEecCC--HHHHHHHHHCCCEEece---EEEEeecchH
Q 026503 172 GFGRILLSAVAKQAVKMGYGRVEWIVLDWN--VNAIKFYEEMGAKVLSE---WRICRLTGDA 228 (237)
Q Consensus 172 Gig~~ll~~~~~~a~~~g~~~i~~~v~~~n--~~a~~~y~k~GF~~~~~---~~~~~~~~~~ 228 (237)
-.--.+++.+++..++.|...+.+.-.... ....+.++++||..... ..++.+++..
T Consensus 19 ~T~P~vv~avv~~l~~~g~~~i~i~e~~~~~~~~~~~~~~~~G~~~~~~~~g~~~v~~~~~~ 80 (206)
T PF04015_consen 19 TTHPEVVRAVVEMLKEAGAKEIIIAESPGSGAADTREVFKRSGYEEIAEEYGAELVDLDDEP 80 (206)
T ss_pred cCCHHHHHHHHHHHHHcCCCceEEEeCCCcchHhHHHHHHHcchhhHHHhcCCcEEEccCCc
Confidence 344578999999999999876655433333 47889999999998754 3444444443
No 180
>cd07253 Glo_EDI_BRP_like_2 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.
Probab=23.79 E-value=1.1e+02 Score=20.95 Aligned_cols=29 Identities=21% Similarity=0.256 Sum_probs=19.8
Q ss_pred CCcEEEEEEecCCHHHHHHHHH-CCCEEece
Q 026503 189 GYGRVEWIVLDWNVNAIKFYEE-MGAKVLSE 218 (237)
Q Consensus 189 g~~~i~~~v~~~n~~a~~~y~k-~GF~~~~~ 218 (237)
++..+.+.| .+-.++++||++ +||+....
T Consensus 3 ~l~hi~l~v-~d~~~s~~Fy~~~lG~~~~~~ 32 (125)
T cd07253 3 RIDHVVLTV-ADIEATLDFYTRVLGMEVVRF 32 (125)
T ss_pred ccceEEEEe-cCHHHHHHHHHHHhCceeecc
Confidence 345565555 334589999988 89998753
No 181
>cd07252 BphC1-RGP6_N_like N-terminal domain of 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC, EC 1.13.11.39) 1 from Rhodococcus globerulus P6 (BphC1-RGP6) and similar proteins. This subfamily contains the N-terminal, non-catalytic, domain of BphC1-RGP6 and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of 2,3-dihydroxybiphenyl 1,2-dioxygenases. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, and has Fe(II) at the catalytic site. Its N-
Probab=23.68 E-value=80 Score=22.13 Aligned_cols=28 Identities=18% Similarity=0.116 Sum_probs=18.0
Q ss_pred CcEEEEEEecCCHHHHHHHHH-CCCEEece
Q 026503 190 YGRVEWIVLDWNVNAIKFYEE-MGAKVLSE 218 (237)
Q Consensus 190 ~~~i~~~v~~~n~~a~~~y~k-~GF~~~~~ 218 (237)
+..+.+.|.. -.++.+||.+ +||+...+
T Consensus 3 l~~v~l~v~D-l~~s~~FY~~~LG~~~~~~ 31 (120)
T cd07252 3 LGYLGVESSD-LDAWRRFATDVLGLQVGDR 31 (120)
T ss_pred ccEEEEEeCC-HHHHHHHHHhccCceeccC
Confidence 3445544433 2488999966 89987543
No 182
>PRK10291 glyoxalase I; Provisional
Probab=23.34 E-value=83 Score=22.35 Aligned_cols=19 Identities=32% Similarity=0.513 Sum_probs=14.8
Q ss_pred CCHHHHHHHHH-CCCEEece
Q 026503 200 WNVNAIKFYEE-MGAKVLSE 218 (237)
Q Consensus 200 ~n~~a~~~y~k-~GF~~~~~ 218 (237)
+-..++.||.+ +||+.+.+
T Consensus 6 Dle~s~~FY~~~LG~~~~~~ 25 (129)
T PRK10291 6 DLQRSIDFYTNVLGMKLLRT 25 (129)
T ss_pred CHHHHHHHHHhccCCEEEEe
Confidence 34689999966 99998753
No 183
>COG3607 Predicted lactoylglutathione lyase [General function prediction only]
Probab=23.15 E-value=53 Score=24.22 Aligned_cols=17 Identities=24% Similarity=0.405 Sum_probs=14.6
Q ss_pred HHHHHHHHHCCCEEece
Q 026503 202 VNAIKFYEEMGAKVLSE 218 (237)
Q Consensus 202 ~~a~~~y~k~GF~~~~~ 218 (237)
.++.+||.++||+....
T Consensus 15 ~~S~~Fy~alGfk~Npq 31 (133)
T COG3607 15 EASKAFYTALGFKFNPQ 31 (133)
T ss_pred HHHHHHHHHhCcccCCC
Confidence 58899999999998753
No 184
>cd08352 Glo_EDI_BRP_like_1 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.
Probab=22.74 E-value=1e+02 Score=21.12 Aligned_cols=28 Identities=29% Similarity=0.330 Sum_probs=19.7
Q ss_pred CCcEEEEEEecCCHHHHHHHH-HCCCEEec
Q 026503 189 GYGRVEWIVLDWNVNAIKFYE-EMGAKVLS 217 (237)
Q Consensus 189 g~~~i~~~v~~~n~~a~~~y~-k~GF~~~~ 217 (237)
++..+.+.|. +-.++++||. .+||+...
T Consensus 3 ~~~hi~l~v~-d~~~a~~fy~~~lG~~~~~ 31 (125)
T cd08352 3 GIHHVAIICS-DYEKSKEFYVEILGFKVIR 31 (125)
T ss_pred ccceEEEEcC-CHHHHHHHHHHhcCCEEee
Confidence 4566666663 3358899997 59999864
No 185
>cd07246 Glo_EDI_BRP_like_8 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.
Probab=22.40 E-value=1.7e+02 Score=20.00 Aligned_cols=19 Identities=37% Similarity=0.557 Sum_probs=14.5
Q ss_pred CCHHHHHHHH-HCCCEEece
Q 026503 200 WNVNAIKFYE-EMGAKVLSE 218 (237)
Q Consensus 200 ~n~~a~~~y~-k~GF~~~~~ 218 (237)
+-..+.+||. .+||+....
T Consensus 11 d~~~a~~FY~~~lG~~~~~~ 30 (122)
T cd07246 11 DAAAAIDFYKKAFGAEELER 30 (122)
T ss_pred CHHHHHHHHHHhhCCEEEEE
Confidence 3358899997 589998754
No 186
>cd07265 2_3_CTD_N N-terminal domain of catechol 2,3-dioxygenase. This subfamily contains the N-terminal, non-catalytic, domain of catechol 2,3-dioxygenase. Catechol 2,3-dioxygenase (2,3-CTD, catechol:oxygen 2,3-oxidoreductase) catalyzes an extradiol cleavage of catechol to form 2-hydroxymuconate semialdehyde with the insertion of two atoms of oxygen. The enzyme is a homotetramer and contains catalytically essential Fe(II) . The reaction proceeds by an ordered bi-unit mechanism. First, catechol binds to the enzyme, this is then followed by the binding of dioxygen to form a tertiary complex, and then the aromatic ring is cleaved to produce 2-hydroxymuconate semialdehyde. Catechol 2,3-dioxygenase belongs to the type I extradiol dioxygenase family. The subunit comprises the N- and C-terminal domains of similar structure fold, resulting from an ancient gene duplication. The active site is located in a funnel-shaped space of the C-terminal domain. This subfamily represents the N-terminal do
Probab=21.75 E-value=96 Score=21.64 Aligned_cols=27 Identities=41% Similarity=0.593 Sum_probs=17.7
Q ss_pred cEEEEEEecCCHHHHHHHHH-CCCEEece
Q 026503 191 GRVEWIVLDWNVNAIKFYEE-MGAKVLSE 218 (237)
Q Consensus 191 ~~i~~~v~~~n~~a~~~y~k-~GF~~~~~ 218 (237)
..+.+.|.. -..+.+||.+ +||+....
T Consensus 6 ~hv~l~v~D-l~~s~~FY~~~lG~~~~~~ 33 (122)
T cd07265 6 GHVQLRVLD-LEEAIKHYREVLGLDEVGR 33 (122)
T ss_pred eEEEEEeCC-HHHHHHHHHhccCCEeeee
Confidence 344444432 3589999965 99998654
No 187
>COG0623 FabI Enoyl-[acyl-carrier-protein]
Probab=21.07 E-value=1.5e+02 Score=24.61 Aligned_cols=44 Identities=18% Similarity=0.226 Sum_probs=35.3
Q ss_pred EEEEEEEccchhcCChHHHHHHHHHHH-HHHhCCcEEEEEEecCC
Q 026503 158 YIEDIFVRECYRRKGFGRILLSAVAKQ-AVKMGYGRVEWIVLDWN 201 (237)
Q Consensus 158 ~i~~~~V~p~~rg~Gig~~ll~~~~~~-a~~~g~~~i~~~v~~~n 201 (237)
|+...-|.|.|-..|+++.-|+...++ |.+.|.+.|+....+.-
T Consensus 145 Ylgs~r~vPnYNvMGvAKAaLEasvRyLA~dlG~~gIRVNaISAG 189 (259)
T COG0623 145 YLGSERVVPNYNVMGVAKAALEASVRYLAADLGKEGIRVNAISAG 189 (259)
T ss_pred eccceeecCCCchhHHHHHHHHHHHHHHHHHhCccCeEEeeeccc
Confidence 455566899999999999999999998 56679888887555443
No 188
>PRK11478 putative lyase; Provisional
Probab=20.73 E-value=89 Score=21.94 Aligned_cols=27 Identities=19% Similarity=0.151 Sum_probs=17.7
Q ss_pred CcEEEEEEecCCHHHHHHHH-HCCCEEec
Q 026503 190 YGRVEWIVLDWNVNAIKFYE-EMGAKVLS 217 (237)
Q Consensus 190 ~~~i~~~v~~~n~~a~~~y~-k~GF~~~~ 217 (237)
+..+.+.| .+=..+++||. .+||+...
T Consensus 7 i~hv~l~v-~D~~~a~~FY~~~LG~~~~~ 34 (129)
T PRK11478 7 VHHIAIIA-TDYAVSKAFYCDILGFTLQS 34 (129)
T ss_pred ecEEEEEc-CCHHHHHHHHHHHhCCEecc
Confidence 44554444 33358899995 58999863
No 189
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=20.56 E-value=3.4e+02 Score=23.30 Aligned_cols=40 Identities=28% Similarity=0.419 Sum_probs=28.6
Q ss_pred hcCChHHHHHHHHHHHHHHhCCcEEEEEEecC-CHHHHHHHHHCC
Q 026503 169 RRKGFGRILLSAVAKQAVKMGYGRVEWIVLDW-NVNAIKFYEEMG 212 (237)
Q Consensus 169 rg~Gig~~ll~~~~~~a~~~g~~~i~~~v~~~-n~~a~~~y~k~G 212 (237)
-|.|+|+.+..+..+ +|..-+.+++... +....+..++.|
T Consensus 46 gg~GlGr~ialefa~----rg~~~vl~Din~~~~~etv~~~~~~g 86 (300)
T KOG1201|consen 46 GGSGLGRLIALEFAK----RGAKLVLWDINKQGNEETVKEIRKIG 86 (300)
T ss_pred CCchHHHHHHHHHHH----hCCeEEEEeccccchHHHHHHHHhcC
Confidence 578999999887654 4665555566544 567778888887
No 190
>PLN03042 Lactoylglutathione lyase; Provisional
Probab=20.55 E-value=2e+02 Score=22.63 Aligned_cols=32 Identities=19% Similarity=0.301 Sum_probs=21.4
Q ss_pred hCCcEEEEEEecCC-HHHHHHHH-HCCCEEeceE
Q 026503 188 MGYGRVEWIVLDWN-VNAIKFYE-EMGAKVLSEW 219 (237)
Q Consensus 188 ~g~~~i~~~v~~~n-~~a~~~y~-k~GF~~~~~~ 219 (237)
.|+....+.+.-.| ..+++||. .+||+...++
T Consensus 24 ~~~~~~Ht~i~V~Dle~Si~FY~~vLG~~~~~r~ 57 (185)
T PLN03042 24 KGYIMQQTMFRIKDPKASLDFYSRVLGMSLLKRL 57 (185)
T ss_pred CCcEEEEEEEeeCCHHHHHHHHHhhcCCEEEEEE
Confidence 35555555444444 58999995 6999987653
No 191
>cd07241 Glo_EDI_BRP_like_3 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.
Probab=20.53 E-value=1.3e+02 Score=20.77 Aligned_cols=25 Identities=20% Similarity=0.069 Sum_probs=16.5
Q ss_pred EEEEEEecCCHHHHHHHHH-CCCEEec
Q 026503 192 RVEWIVLDWNVNAIKFYEE-MGAKVLS 217 (237)
Q Consensus 192 ~i~~~v~~~n~~a~~~y~k-~GF~~~~ 217 (237)
.+.+.|. +-.++++||++ +||+...
T Consensus 4 Hi~l~v~-dl~~s~~FY~~~lg~~~~~ 29 (125)
T cd07241 4 HVAIWTK-DLERMKAFYVTYFGATSNE 29 (125)
T ss_pred EEEEEec-CHHHHHHHHHHHhCCEeec
Confidence 4444443 23589999977 7998754
No 192
>PF11633 SUD-M: Single-stranded poly(A) binding domain; InterPro: IPR024375 This domain identifies non-structural protein 3 (Nsp3). It is found in human SARS coronavirus polyprotein 1a and 1ab, and in related coronavirus polyproteins [].; PDB: 2KQV_A 2W2G_A 2WCT_D 2JZE_A 2JZF_A 2RNK_A 2JZD_A.
Probab=20.18 E-value=2.7e+02 Score=20.87 Aligned_cols=40 Identities=15% Similarity=-0.062 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHhCCcEEEEEEecCCHHHHHHHHHCCCEEeceE
Q 026503 177 LLSAVAKQAVKMGYGRVEWIVLDWNVNAIKFYEEMGAKVLSEW 219 (237)
Q Consensus 177 ll~~~~~~a~~~g~~~i~~~v~~~n~~a~~~y~k~GF~~~~~~ 219 (237)
=++.++++|++.|.-. .|-.++.+..++.++-||...+.+
T Consensus 24 ~~r~ml~~ak~~g~~~---pvc~D~~A~~k~lkr~gv~~~egl 63 (142)
T PF11633_consen 24 NFRAMLQHAKETGLLC---PVCIDYPAFCKTLKRKGVDPKEGL 63 (142)
T ss_dssp -CHHHHHHHHHHT-EE---EEETT-HHHHHHHHHTTS---SEE
T ss_pred hHHHHHHHHHhcCcEE---EEEeccHHHHHHHhccCcccccce
Confidence 3455677788877543 467889999999999888877643
No 193
>cd07238 Glo_EDI_BRP_like_5 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structure of this family is a that of a strand-swapped dimer.
Probab=20.02 E-value=96 Score=21.19 Aligned_cols=16 Identities=31% Similarity=0.605 Sum_probs=13.5
Q ss_pred HHHHHHHHH-CCCEEec
Q 026503 202 VNAIKFYEE-MGAKVLS 217 (237)
Q Consensus 202 ~~a~~~y~k-~GF~~~~ 217 (237)
..++.||++ +||+...
T Consensus 12 ~~s~~FY~~~lG~~~~~ 28 (112)
T cd07238 12 EAAAAFYADVLGLDVVM 28 (112)
T ss_pred HHHHHHHHHhcCceEEE
Confidence 588999987 9999763
Done!