BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026507
(237 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8VZ13|Y1816_ARATH Uncharacterized protein At1g08160 OS=Arabidopsis thaliana
GN=At1g08160 PE=2 SV=1
Length = 221
Score = 63.5 bits (153), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 75/153 (49%), Gaps = 4/153 (2%)
Query: 70 TWLILKPEFPEFRVDSASIAQLNTTSANSTMTATWQLSLRVRNPNRKLALVYNTLEAAVL 129
T+L L+P+ + V++AS+ + + + + A + ++ NP + +++ Y+++ +
Sbjct: 58 TYLTLRPKRLIYTVEAASVQEFAIGNNDDHINAKFSYVIKSYNPEKHVSVRYHSMRISTA 117
Query: 130 YGEWELDSTLLPPFSQEKGNETRLHFQAGLLSEYVGESV--ARGIEKERARGEVEFGIGV 187
+ + + PF Q NETR+ Q L+S V S AR + E+++G +E + +
Sbjct: 118 HHNQSVAHKNISPFKQRPKNETRIETQ--LVSHNVALSKFNARDLRAEKSKGTIEMEVYI 175
Query: 188 YGWVRYKARWWSMRWRFMNVYCNGVKIGVSNDG 220
V YK + R R + C V I V++
Sbjct: 176 TARVSYKTWIFRSRRRTLKAVCTPVMINVTSSS 208
>sp|P42293|YXIA_BACSU Uncharacterized protein YxiA OS=Bacillus subtilis (strain 168)
GN=yxiA PE=3 SV=2
Length = 469
Score = 33.9 bits (76), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 39/102 (38%), Gaps = 13/102 (12%)
Query: 48 LLCRLFLVVIVIISIMAVASFATWLILKPEFPEFRVDSASIAQLNTT---------SANS 98
+ RLF V + IMA + KP F E V SI + N T SA S
Sbjct: 1 MFNRLFRVCFLAALIMAFTLPNSVYAQKPIFKEVSVHDPSIIETNGTFYVFGSHLASAKS 60
Query: 99 TMTATW-QLSLRVRNPNRKLALVYNTLEAAVLYGEWELDSTL 139
W QL+ V N N + VY L+ EW TL
Sbjct: 61 NDLMQWQQLTTSVSNDNPLIPNVYEELKETF---EWAQSDTL 99
>sp|P0A651|Y3154_MYCBO Putative diacyglycerol O-acyltransferase Mb3154c OS=Mycobacterium
bovis (strain ATCC BAA-935 / AF2122/97) GN=Mb3154c PE=3
SV=1
Length = 463
Score = 31.6 bits (70), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 49/101 (48%), Gaps = 11/101 (10%)
Query: 49 LCRLFLVVIVIISIMAVA-SFATWLILKPEFPEFRVDSASIAQLNTTSANSTMTATWQ-- 105
+CR F V I +++ A+ S+ LI + E P F DS +T +NS ++ T
Sbjct: 244 VCRKFDVTINDVALAAITESYRNVLIQRGERPRF--DSLRTLVPVSTRSNSALSKTDNRV 301
Query: 106 ------LSLRVRNPNRKLALVYNTLEAAVLYGEWELDSTLL 140
L + NP ++L +V++ L A G+ + +TL+
Sbjct: 302 SLMLPNLPVDQENPLQRLRIVHSRLTRAKAGGQRQFGNTLM 342
>sp|P0A650|TGS1_MYCTU Probable diacyglycerol O-acyltransferase tgs1 OS=Mycobacterium
tuberculosis GN=tgs1 PE=1 SV=1
Length = 463
Score = 31.6 bits (70), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 49/101 (48%), Gaps = 11/101 (10%)
Query: 49 LCRLFLVVIVIISIMAVA-SFATWLILKPEFPEFRVDSASIAQLNTTSANSTMTATWQ-- 105
+CR F V I +++ A+ S+ LI + E P F DS +T +NS ++ T
Sbjct: 244 VCRKFDVTINDVALAAITESYRNVLIQRGERPRF--DSLRTLVPVSTRSNSALSKTDNRV 301
Query: 106 ------LSLRVRNPNRKLALVYNTLEAAVLYGEWELDSTLL 140
L + NP ++L +V++ L A G+ + +TL+
Sbjct: 302 SLMLPNLPVDQENPLQRLRIVHSRLTRAKAGGQRQFGNTLM 342
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.134 0.419
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 88,566,129
Number of Sequences: 539616
Number of extensions: 3498905
Number of successful extensions: 9977
Number of sequences better than 100.0: 10
Number of HSP's better than 100.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 9960
Number of HSP's gapped (non-prelim): 25
length of query: 237
length of database: 191,569,459
effective HSP length: 114
effective length of query: 123
effective length of database: 130,053,235
effective search space: 15996547905
effective search space used: 15996547905
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)