BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026510
(237 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9ZT66|E134_MAIZE Endo-1,3;1,4-beta-D-glucanase OS=Zea mays PE=1 SV=1
Length = 303
Score = 149 bits (375), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 82/194 (42%), Positives = 117/194 (60%), Gaps = 8/194 (4%)
Query: 5 QCCANPPTLNPN----SGAGHV--EKLGGLDTYVTGSPDSKLAALLISDIFGYEAPNLRK 58
QC NPP + + + AG V + GGL YV+G+ S A +L SD+FGYEAP LR+
Sbjct: 28 QCLDNPPDRSIHGRQLAEAGEVVHDLPGGLRAYVSGAASSSRAVVLASDVFGYEAPLLRQ 87
Query: 59 LADKVAAAGFYVAVPDFFHGDPHVDGGRSLQEWINDHGVDKGFEEAKPVIQALKCKGITA 118
+ DKVA AG++V VPDF GD ++D ++ EW+ H K E+AKP+ ALK +G +
Sbjct: 88 IVDKVAKAGYFVVVPDFLKGD-YLDDKKNFTEWLEAHSPVKAAEDAKPLFAALKKEG-KS 145
Query: 119 TGAVGFCWGAKVAVQLAKREFIQAAVLLHPSFVTVDDIKGVEVPVSVLGAEIDPVSPPAL 178
G+CWG K++V++ K ++A L HP VT DD+K V+ P+ +LGA+ D +PP
Sbjct: 146 VAVGGYCWGGKLSVEVGKTSDVKAVCLSHPYSVTADDMKEVKWPIEILGAQNDTTTPPKE 205
Query: 179 VKEFEEALTAKSEV 192
V F L + EV
Sbjct: 206 VYRFVHVLRERHEV 219
>sp|Q6P7K0|CMBL_XENTR Carboxymethylenebutenolidase homolog OS=Xenopus tropicalis GN=cmbl
PE=2 SV=1
Length = 246
Score = 106 bits (264), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/203 (34%), Positives = 102/203 (50%), Gaps = 8/203 (3%)
Query: 41 AALLISDIFGYEAPNLRKLADKVAAAGFYVAVPDFFHGD----PHVDGGRSLQEWINDHG 96
A +++ DIFG++ PN R +AD + A G+ PDFF G P D + EW+
Sbjct: 44 AVIVVQDIFGWQLPNTRFMADLLTAHGYITICPDFFVGQEPWKPSNDRS-TFTEWLQTRQ 102
Query: 97 VDKGFEEAKPVIQALKCK-GITATGAVGFCWGAKVAVQLA-KREFIQAAVLLHPSFVTVD 154
K +E V++ LK + + G +GFCWG V L K ++A V + V+
Sbjct: 103 ATKVEKEINVVLKYLKEQCHVKKIGVIGFCWGGVVTHHLMLKYPELKAGVSFYGIIRDVE 162
Query: 155 DIKGVEVPVSVLGAEIDPVSPPALVKEFEEALTAKSEVDSFVKIFPKVAHGWSVRYNVED 214
D + P + AE+D V P V EE L S+VD VK+FPK HG+ R N +
Sbjct: 163 DRYNLLNPTLFIFAEMDHVIPLEQVSLLEEKLKVHSKVDFQVKVFPKQTHGFVHRKNEDI 222
Query: 215 ESAVKA-AEEAHQNLLEWLAKHV 236
K EEA +N+LEWL K++
Sbjct: 223 NPEDKPFIEEARKNMLEWLHKYI 245
>sp|Q8R1G2|CMBL_MOUSE Carboxymethylenebutenolidase homolog OS=Mus musculus GN=Cmbl PE=2
SV=1
Length = 245
Score = 103 bits (258), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 76/228 (33%), Positives = 109/228 (47%), Gaps = 11/228 (4%)
Query: 18 GAGHVEKLGGLDTYVTGSP-DSKLAALLISDIFGYEAPNLRKLADKVAAAGFYVAVPDFF 76
G GH ++ + YVT SP D+ A +++ DIFG++ PN R +AD +A G+ VPDFF
Sbjct: 20 GMGHEVQVEHIKAYVTRSPVDAGKAVIVVQDIFGWQLPNTRYMADMIARNGYTTIVPDFF 79
Query: 77 HG----DPHVDGGRSLQEWINDHGVDKGFEEAKPVIQALK--CKGITATGAVGFCWGAKV 130
G DP D + W+ K E V++ L+ C G VGFCWG V
Sbjct: 80 VGQEPWDPAGDWS-TFPAWLKSRNARKVNREVDAVLRYLRQQCHA-QKIGIVGFCWGGVV 137
Query: 131 AVQ-LAKREFIQAAVLLHPSFVTVDDIKGVEVPVSVLGAEIDPVSPPALVKEFEEALTAK 189
Q + I+A V ++ +D+ ++ P + AE D V P V + L
Sbjct: 138 VHQVMTAYPDIRAGVSVYGIIRDSEDVYNLKNPTLFIFAENDTVIPLEQVSTLTQKLKEH 197
Query: 190 SEVDSFVKIFPKVAHGWSVRYNVEDESAVK-AAEEAHQNLLEWLAKHV 236
V+ VK F HG+ R + A K EEA +NL+EWL K+V
Sbjct: 198 CIVNYQVKTFSGQTHGFVHRKREDCSPADKPYIEEARRNLIEWLNKYV 245
>sp|Q5XH09|CMBL_XENLA Carboxymethylenebutenolidase homolog OS=Xenopus laevis GN=cmbl PE=2
SV=1
Length = 246
Score = 103 bits (258), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 104/206 (50%), Gaps = 14/206 (6%)
Query: 41 AALLISDIFGYEAPNLRKLADKVAAAGFYVAVPDFFHGD----PHVDGGRSLQEWINDHG 96
A +++ DIFG++ PN R +AD + A G+ PDFF G P D + EW+
Sbjct: 44 AVIVVQDIFGWQLPNTRFMADLLTAHGYITICPDFFVGQESWKPSNDWS-TFTEWLQTRQ 102
Query: 97 VDKGFEEAKPVIQALKCK-GITATGAVGFCWGAKVAVQLA-KREFIQAAVLLHPSFVTVD 154
K +E V++ LK + + G +GFCWG V L K ++A V + V+
Sbjct: 103 ATKVEKEMNVVLKYLKEQCHVKKIGVIGFCWGGVVTHHLMLKYPELKAGVSFYGIIRDVE 162
Query: 155 DIKGVEVPVSVLGAEIDPVSPPALVKEFEEALTAKSEVDSFVKIFPKVAHGWSVR----Y 210
D + P + AEID V P V E+ L S+VD +K+FPK HG+ R
Sbjct: 163 DRYNLLNPTLFIFAEIDHVIPLEQVSLLEQKLKVHSKVDFQIKVFPKQTHGFVHRKKEDI 222
Query: 211 NVEDESAVKAAEEAHQNLLEWLAKHV 236
N ED+ + EEA +++LEWL K++
Sbjct: 223 NPEDKPFI---EEARKDMLEWLQKYI 245
>sp|Q5RBU3|CMBL_PONAB Carboxymethylenebutenolidase homolog OS=Pongo abelii GN=CMBL PE=2
SV=1
Length = 245
Score = 97.8 bits (242), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 74/229 (32%), Positives = 110/229 (48%), Gaps = 13/229 (5%)
Query: 18 GAGHVEKLGGLDTYVTGSP-DSKLAALLISDIFGYEAPNLRKLADKVAAAGFYVAVPDFF 76
G G ++ + YVT SP D+ A ++I DIFG++ PN R +AD ++ G+ VPDFF
Sbjct: 20 GLGREVQVEHIKAYVTKSPVDAGKAVIVIQDIFGWQLPNTRYMADMISGNGYTTIVPDFF 79
Query: 77 HG----DPHVDGGRSLQEWINDHGVDKGFEEAKPVIQALK--CKGITATGAVGFCWGAKV 130
G DP D EW+ K E +++ LK C G VGFCWG +
Sbjct: 80 VGQEPWDPSGDWS-IFPEWLKTRNAQKIDREISAILKYLKQQCHA-QKIGIVGFCWGG-I 136
Query: 131 AVQ--LAKREFIQAAVLLHPSFVTVDDIKGVEVPVSVLGAEIDPVSPPALVKEFEEALTA 188
AV + K +A V ++ +DI ++ P + AE D V P V + L
Sbjct: 137 AVHHLMMKYSEFRAGVSVYGIVKDSEDIYNLKNPTLFIFAENDVVIPLKDVSLLTQKLKE 196
Query: 189 KSEVDSFVKIFPKVAHGWSVRYNVEDESAVK-AAEEAHQNLLEWLAKHV 236
+V+ +K F HG+ R + A K +EA +NL+EWL K++
Sbjct: 197 HCKVEYQIKTFSGQTHGFVHRKREDCSPADKPYIDEARRNLIEWLNKYM 245
>sp|Q96DG6|CMBL_HUMAN Carboxymethylenebutenolidase homolog OS=Homo sapiens GN=CMBL PE=1
SV=1
Length = 245
Score = 97.1 bits (240), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 73/228 (32%), Positives = 107/228 (46%), Gaps = 11/228 (4%)
Query: 18 GAGHVEKLGGLDTYVTGSP-DSKLAALLISDIFGYEAPNLRKLADKVAAAGFYVAVPDFF 76
G G ++ + YVT SP D+ A ++I DIFG++ PN R +AD ++ G+ VPDFF
Sbjct: 20 GLGREVQVEHIKAYVTKSPVDAGKAVIVIQDIFGWQLPNTRYIADMISGNGYTTIVPDFF 79
Query: 77 HG----DPHVDGGRSLQEWINDHGVDKGFEEAKPVIQALK--CKGITATGAVGFCWGAKV 130
G DP D EW+ K E +++ LK C G VGFCWG
Sbjct: 80 VGQEPWDPSGDWS-IFPEWLKTRNAQKIDREISAILKYLKQQCHA-QKIGIVGFCWGGTA 137
Query: 131 AVQL-AKREFIQAAVLLHPSFVTVDDIKGVEVPVSVLGAEIDPVSPPALVKEFEEALTAK 189
L K +A V ++ +DI ++ P + AE D V P V + L
Sbjct: 138 VHHLMMKYSEFRAGVSVYGIVKDSEDIYNLKNPTLFIFAENDVVIPLKDVSLLTQKLKEH 197
Query: 190 SEVDSFVKIFPKVAHGWSVRYNVEDESAVK-AAEEAHQNLLEWLAKHV 236
+V+ +K F HG+ R + A K +EA +NL+EWL K++
Sbjct: 198 CKVEYQIKTFSGQTHGFVHRKREDCSPADKPYIDEARRNLIEWLNKYM 245
>sp|Q7TP52|CMBL_RAT Carboxymethylenebutenolidase homolog OS=Rattus norvegicus GN=Cmbl
PE=2 SV=1
Length = 245
Score = 96.7 bits (239), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/228 (32%), Positives = 107/228 (46%), Gaps = 11/228 (4%)
Query: 18 GAGHVEKLGGLDTYVTGSP-DSKLAALLISDIFGYEAPNLRKLADKVAAAGFYVAVPDFF 76
G G ++ + YVT SP D+ A +++ DIFG++ N R +AD +A G+ VPDFF
Sbjct: 20 GMGQEVQVEHIKAYVTRSPVDAGKAVIVVQDIFGWQLSNTRYMADMIAGNGYTTIVPDFF 79
Query: 77 HG----DPHVDGGRSLQEWINDHGVDKGFEEAKPVIQALK--CKGITATGAVGFCWGAKV 130
G DP D + EW+ K E V++ LK C G VGFCWG V
Sbjct: 80 VGQEPWDPAGDWS-TFPEWLKSRNARKINREVDAVLRYLKQQCHA-QKIGIVGFCWGGIV 137
Query: 131 AVQ-LAKREFIQAAVLLHPSFVTVDDIKGVEVPVSVLGAEIDPVSPPALVKEFEEALTAK 189
+ ++A V ++ +D+ ++ P + AE D V P V + L
Sbjct: 138 VHHVMTTYPEVRAGVSVYGIIRDSEDVYNLKNPTLFIFAENDAVIPLEQVSILIQKLKEH 197
Query: 190 SEVDSFVKIFPKVAHGWSVRYNVEDESAVK-AAEEAHQNLLEWLAKHV 236
V+ VK F HG+ R + A K EEA +NL+EWL K++
Sbjct: 198 CIVNYQVKTFSGQTHGFVHRKREDCSPADKPYIEEARRNLIEWLNKYI 245
>sp|P39721|AIM2_YEAST Protein AIM2 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=AIM2 PE=1 SV=1
Length = 246
Score = 89.7 bits (221), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 115/241 (47%), Gaps = 14/241 (5%)
Query: 2 SSPQCCANPPTLNPNSGAGHVEKLGGLDTYVTGSPDSKLAALLI-SDIFGYEAPNLRKLA 60
+ P C + + G E++ GLDTY GS K ++I +D++G + N+ A
Sbjct: 4 NQPGKCCFEGVCHDGTPKGRREEIFGLDTYAAGSTSPKEKVIVILTDVYGNKFNNVLLTA 63
Query: 61 DKVAAAGFYVAVPDFFHGDP-HVDGGRSLQEWINDHGVDKGFEEAKPVIQALKCK-GITA 118
DK A+AG+ V VPD GD D W H + + ++ LK +
Sbjct: 64 DKFASAGYMVFVPDILFGDAISSDKPIDRDAWFQRHSPEVTKKIVDGFMKLLKLEYDPKF 123
Query: 119 TGAVGFCWGAKVAVQLAKRE--FIQAAVLLHPSFVTVDDIKGVEV--PVSVLGAEIDPVS 174
G VG+C+GAK AVQ + AA + HPSFV++++I+ ++ P+ + AE D +
Sbjct: 124 IGVVGYCFGAKFAVQHISGDGGLANAAAIAHPSFVSIEEIEAIDSKKPILISAAEEDHIF 183
Query: 175 PPALVKEFEEALT---AKSEVDSFVKIFPKVAHGWSVRYNVEDESAVKAAEEAHQNLLEW 231
P L EE L A ++D +F VAHG++ R ++ + A E+ + + W
Sbjct: 184 PANLRHLTEEKLKDNHATYQLD----LFSGVAHGFAARGDISIPAVKYAKEKVLLDQIYW 239
Query: 232 L 232
Sbjct: 240 F 240
>sp|O14359|YB4E_SCHPO Uncharacterized AIM2 family protein C30D10.14
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPBC30D10.14 PE=3 SV=1
Length = 249
Score = 78.2 bits (191), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 107/230 (46%), Gaps = 28/230 (12%)
Query: 22 VEKLGGLDTYVTGSPDSKLAALLISDIFGYEAPNLRKLADKVAAAGFYVAVPDFFHGDPH 81
+E GGL TYV GS + + DIFG + +++ ADK+A GF V +PDF G P
Sbjct: 25 IENFGGLTTYVVGSTSNTRVLIGFMDIFGL-SDQIKEGADKLADDGFTVYLPDFLEGKPL 83
Query: 82 VDGGR-----SLQEWINDHGVDK-----GFEEAKPVIQALKCK-GITAT-GAVGFCWGAK 129
Q+ ND + + + V++A++ G T G GFCWGAK
Sbjct: 84 PVTALPPKTPEDQKLCNDFFSTRISPNLHWPKLAKVVEAVRANHGPNVTIGTYGFCWGAK 143
Query: 130 VAVQL-AKREFIQAAVLLHPSFVTVDDIKGVEVPVSVLGAEIDPVSPPALVKEFEEALT- 187
V V A +F+ A HPSF D V PV L ++ + ++KE+EEA
Sbjct: 144 VLVTYPATIDFVGIAS-CHPSFPDSADAANVHCPVLFLCSKDEDAK---IIKEWEEAFKT 199
Query: 188 ----AKSEVDSFVKIFPKVAHGW-SVRYNVEDESAVKAAEEAHQNLLEWL 232
AKS ++F +F HGW + R ++ + K +E +Q + +
Sbjct: 200 NPAYAKSSFETFSDMF----HGWMAARADLSNPEQRKRFDEGYQKVSSFF 245
>sp|Q9P7U1|YI7F_SCHPO Uncharacterized AIM2 family protein C977.15 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPAC977.15 PE=3 SV=1
Length = 247
Score = 76.6 bits (187), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 109/245 (44%), Gaps = 22/245 (8%)
Query: 6 CC-----ANPPTLNPNSGAGHVEKLGGLDTYVTGSPDSKLAALLISDIFGYEAPNLRKLA 60
CC A P N ++ +GG+ TY TG SK+ + D+FG + +++ A
Sbjct: 3 CCPTKSGAAPTNRNYELQGEMLKDIGGMQTYFTGKRSSKVVLIGFMDVFGL-SKQIKEGA 61
Query: 61 DKVAAAGFYVAVPDFFHG--------DPH-VDGGRSLQEWINDHGVDKGFEEAKPVIQAL 111
D++A + +PDF +G DP ++ + +++ + + VI+ +
Sbjct: 62 DQLANHELAIYLPDFLNGETASIEMIDPKTIEQKEARSKFMEKISSPLHWPKLTKVIEDI 121
Query: 112 -KCKGI-TATGAVGFCWGAKVAVQLAKREFIQAAVLLHPSFVTVDDIKGVEVPVSVLGA- 168
+ G GA GFCWGAKV + +E HPS + D K V PV L +
Sbjct: 122 ERIHGQDVKIGAYGFCWGAKVLITYPNKERFLRIGCAHPSLLDPVDAKHVHCPVCFLCSK 181
Query: 169 EIDPVSPPALVKEFEEALTAKSEVDSFVKIFPKVAHGW-SVRYNVEDESAVKAAEEAHQN 227
+ DP A K FE + +S+ + F K+ HGW + R N+ D K + +Q
Sbjct: 182 DEDPEEVDAWKKSFENSPYFS---ESYFETFGKMHHGWMAARANLSDPENRKYFDLGYQI 238
Query: 228 LLEWL 232
L++
Sbjct: 239 FLKFF 243
>sp|O67802|DLHH_AQUAE Putative carboxymethylenebutenolidase OS=Aquifex aeolicus (strain
VF5) GN=aq_1997 PE=3 SV=1
Length = 231
Score = 55.1 bits (131), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 97/208 (46%), Gaps = 14/208 (6%)
Query: 41 AALLISDIFGYEAP--NLRKLADKVAAAGFYVAVPDFFHG---DPHVDGGRSLQEWINDH 95
A L+ + +G E+P N++++ DK+A GF PDF+ G D D G+ + E
Sbjct: 27 AVLVFHEWWGLESPLSNIKEICDKLADEGFVAFAPDFYKGQYADNPDDAGKLMTEMFEKR 86
Query: 96 G--VDKGFEEAKPVIQALKCKGITATGAVGFCWGAKVAVQLAKR--EFIQAAVLLH--PS 149
VD+ F+ + ++ + G GFC G +A+ A + E + A++ + P
Sbjct: 87 MDEVDRIFQASVEFVKECRYTYPKKVGITGFCCGGTLAMYFAAKFPEMVDASLPFYGLPQ 146
Query: 150 FVTVDDIKGVEVPVSVLGAEIDPVSPPALVKEFEEALTAKSEVDSFVKIFPKVAHGWSVR 209
+ + + ++VP+ + AE D V + + + K+ VD VK+F V H + +
Sbjct: 147 LTQI-NAENIKVPIFFILAEKDEFVNNDEVIDIAKTVW-KNGVDVQVKVFSGVTHAF-LN 203
Query: 210 YNVEDESAVKAAEEAHQNLLEWLAKHVK 237
ED K A EA + + + ++K
Sbjct: 204 EKREDVYDPKRACEAWELAVNFFKTYLK 231
>sp|P46209|USF_AQUPY Protein usf OS=Aquifex pyrophilus GN=usf PE=4 SV=1
Length = 231
Score = 50.1 bits (118), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 84/177 (47%), Gaps = 13/177 (7%)
Query: 41 AALLISDIFGYEAP--NLRKLADKVAAAGFYVAVPDFFHG---DPHVDGGRSLQEWINDH 95
++I + +G E+P N++++ D+ A GF PDF+ G D D G+ + + +
Sbjct: 27 GVIVIHEWWGLESPLSNIKEICDRFAQEGFVAFAPDFYEGKYADNPDDAGKLMTDMFENR 86
Query: 96 --GVDKGFEEAKPVIQALKCKGITATGAVGFCWGAKVAVQLAKR--EFIQAAVLLH--PS 149
VD F+ + ++ + G GFC G +++ A + + I A+V + P
Sbjct: 87 MDKVDAIFKASVDFLKECRYTSPKKVGVTGFCCGGTLSMYFAGKFPDLIDASVPFYGLPQ 146
Query: 150 FVTVDDIKGVEVPVSVLGAEIDPVSPPALVKEFEEALTAKSEVDSFVKIFPKVAHGW 206
+T D + ++VP+ + AE D V + + + K+ VD VK++ V H +
Sbjct: 147 -ITKIDAENIKVPIFFILAEKDEFVNNDEVIDIAKKVW-KNGVDVKVKVYSGVTHAF 201
>sp|Q7DFU6|YGHX_ECOLI Putative uncharacterized protein YghX OS=Escherichia coli (strain
K12) GN=yghX PE=5 SV=3
Length = 278
Score = 48.5 bits (114), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 89/197 (45%), Gaps = 28/197 (14%)
Query: 54 PNLRKLADKVAAAGFYVAVPDFFH---GDP-HVDGGRSLQEWINDHGVDKGFEEAKPVIQ 109
P + +A +VA AG+ PD G P + D GR LQ+ ++ + F A +Q
Sbjct: 95 PYIEDVARRVAKAGYIALAPDGLSSVGGYPGNDDKGRELQQQVDPTNLMNDFFAAIEFMQ 154
Query: 110 ALKCKGITATGAVGFCWGAKV--AVQLAKREFIQAAVLLHPSFVTVDDIKGVEVPVSVLG 167
+ G GFC+G V A +A E + AV + D+ +E P+ +
Sbjct: 155 RYP-QATGKVGITGFCYGGGVSNAAAVAYPE-LACAVPFYGRQAPTADVAKIEAPLLLHF 212
Query: 168 AEIDPVSPPALVKE----FEEALTAKSEVDSFVKIFPKVAHGW----SVRYNVEDESAVK 219
AE+D + E +E AL A ++V I+P V HG+ + RY D+S
Sbjct: 213 AELD-----TRINEGWPAYEAALKANNKVYE-AYIYPGVNHGFHNDSTPRY---DKS--- 260
Query: 220 AAEEAHQNLLEWLAKHV 236
AA+ A Q L+W K++
Sbjct: 261 AADLAWQRTLKWFDKYL 277
>sp|Q8ZAL4|DLHH_YERPE Putative carboxymethylenebutenolidase OS=Yersinia pestis GN=YPO3787
PE=3 SV=1
Length = 267
Score = 41.2 bits (95), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/212 (20%), Positives = 93/212 (43%), Gaps = 25/212 (11%)
Query: 43 LLISDIFGYEAPNLRKLADKVAAAGFYVAVPDFFHGDPHVDGGRSLQEWINDHGVDKGFE 102
+++ +IFG +++ + ++A G+ P+ + ++ E +N+ + K
Sbjct: 50 IVVQEIFGVHE-HIQDICRRLAKQGYLAIAPELYFRQGDAKDYSNINELVNN--LVKKVP 106
Query: 103 EAKPVIQ-------ALKCKGITATGAV-GFCWGAKVA-VQLAKREFIQAAVLLHPSFV-- 151
+ + ++ A + G T A+ GFCWG ++A + A ++AAV + V
Sbjct: 107 DRQVLVDLDHTAHWASRHGGDTKKLAITGFCWGGRIAWLYAAHNPQLKAAVAWYGKLVGE 166
Query: 152 --------TVDDIKGVEVPVSVLGAEIDPVSPPALVKEFEEALTAKSEVDSFVKIFPKVA 203
VD + PV L D P ++ +AL A + D+ + ++P+
Sbjct: 167 KTLFLPKYPVDVAIDLCAPVLGLYGGKDTSIPAEHIETMRQALRA-ANADAEIIVYPEAG 225
Query: 204 HGWSVRYNVEDESAVKAAEEAHQNLLEWLAKH 235
H ++ Y + ++A++ Q +L+W +H
Sbjct: 226 HAFNADYRPSYHA--ESAQDGWQRMLDWFTQH 255
>sp|P71505|DLHH_METEA Putative carboxymethylenebutenolidase OS=Methylobacterium
extorquens (strain ATCC 14718 / DSM 1338 / AM1)
GN=MexAM1_META1p1735 PE=3 SV=2
Length = 291
Score = 40.8 bits (94), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/211 (19%), Positives = 84/211 (39%), Gaps = 22/211 (10%)
Query: 43 LLISDIFGYEAPNLRKLADKVAAAGFYVAVPDFFHGDPHVDGGRSLQEWIN-------DH 95
L++ +IFG +++ + ++A G++ P+ + V ++Q+ ++ D
Sbjct: 82 LVVQEIFGVH-EHIKDVCRRLAKLGYFALAPELYARQGDVSTLTNIQQIVSEVVSKVPDA 140
Query: 96 GVDKGFEEAKPVIQALKCKGITATGAVGFCWGAKVA-VQLAKREFIQAAVLLHPSFVT-- 152
V + A + G GFCWG ++ + A ++A V + V
Sbjct: 141 QVMSDLDAAVAFAKGTGKADTARLGITGFCWGGRITWLYAAHNPAVKAGVAWYGRLVGDS 200
Query: 153 --------VDDIKGVEVPVSVLGAEIDPVSPPALVKEFEEALTAKSEVDSFVKIFPKVAH 204
VD ++ PV L D P A + +EA A + FV ++P+ H
Sbjct: 201 SALMPKNPVDVAADLKAPVLGLYGGADQGIPVATIDRMKEACRAAGKTCDFV-VYPEAGH 259
Query: 205 GWSVRYNVEDESAVKAAEEAHQNLLEWLAKH 235
+ Y + + A++ + L +W ++
Sbjct: 260 AFHADYRPSYRA--EPAQDGWKRLQDWFRQY 288
>sp|O67988|CLCD_RHOOP Carboxymethylenebutenolidase OS=Rhodococcus opacus GN=clcD PE=3
SV=1
Length = 252
Score = 40.8 bits (94), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 82/227 (36%), Gaps = 40/227 (17%)
Query: 33 TGSPDSKLAALLISDIFGYEAPNLRKLADKVAAAGFYVAVPDFFH-----GDPHVDGGRS 87
TGS D+ +L++DIFG P R LA +A G V +PD FH DP D +
Sbjct: 37 TGSGDT---IVLLTDIFGV-TPFYRHLAAMLAEKGHDVVIPDVFHRVGHATDPGRDAALA 92
Query: 88 LQEWINDHGVDKGFEEAKPVIQALKCKGITATGAVGFCWGAKVAVQLAKREFIQAAVLLH 147
+ ++D + E A G +GFC G A+ A H
Sbjct: 93 RRRQLDDRLAIEDIERTV----AHTVDDQQTFGVLGFCLGGSFALLTAA---------AH 139
Query: 148 PSFVTV------DDIKGVEVPVSVLGAEIDPVSPPALVKEFEEALTAKSEVDSFVKI--- 198
P+ VT G +VPV D + P L + E+D +I
Sbjct: 140 PNQVTATYYAFPKGAPGAKVPVKPPLEAADAIDGPVLCHWGRDDYIDHEEIDQLEQILAS 199
Query: 199 ---------FPKVAHGWSVRYNVEDESAVKAAEEAHQNLLEWLAKHV 236
+ H + + + AA ++ Q +E+ +++
Sbjct: 200 APGPSEIRWYDNAGHSFLAGLTEPNHPSTAAAHDSWQRTVEFFERYL 246
>sp|Q54MZ9|CMBL_DICDI Carboxymethylenebutenolidase homolog OS=Dictyostelium discoideum
GN=cmbl PE=3 SV=1
Length = 255
Score = 40.4 bits (93), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 90/223 (40%), Gaps = 43/223 (19%)
Query: 29 DTYVTGSPDSKLA---ALLISDIFGYEAPNLRKLADKVAAAGFYVAVPDFFH-------- 77
D YV+ DS+ + + D FG L ++ADK+A G++V P+F++
Sbjct: 17 DAYVSRPKDSQKELKPVIFVMDAFGLR-DWLYEMADKIAEEGYFVVQPNFYYRIGKNIIT 75
Query: 78 ----------GDPHVDGGRSLQEWINDHGVDKGFEEAKPVIQALKCKGITAT----GAVG 123
D + R+ IN E I K +G+ + VG
Sbjct: 76 NLEKLKSADTKDEVICQIRTQMAKINREETVSDVSEMFDFID--KQEGVRKSKEGVAIVG 133
Query: 124 FCWGAKVAVQ--LAKREFIQAAVLLHPSFVTVDD--------IKGVEVPVSVLGAEIDPV 173
+C+G VA++ +A + ++ H + + D +KGV+ A+ D
Sbjct: 134 YCFGGGVAMRSAIAFPDIVKVVASFHAGRLAIPDDENSIHKHLKGVKAECYFGHADNDQS 193
Query: 174 SPPALVKEFEEALT-AKSEVDSFVKIFPKVAHGW----SVRYN 211
P + FE++LT A + S + P AHGW ++ YN
Sbjct: 194 MPLDQIHLFEKSLTEAGIKYTSEIYNNPSCAHGWVMGDTLMYN 236
>sp|Q8X8L4|DLHH_ECO57 Putative carboxymethylenebutenolidase OS=Escherichia coli O157:H7
GN=ysgA PE=3 SV=1
Length = 271
Score = 39.7 bits (91), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 46/218 (21%), Positives = 87/218 (39%), Gaps = 37/218 (16%)
Query: 43 LLISDIFGYEAPNLRKLADKVAAAGFYVAVPDFF--HGDPHVDGGRSLQEWINDHGVDKG 100
+++ +IFG ++R + ++A G+ P+ + GDP+ ++ + + G
Sbjct: 60 IVVQEIFGVHE-HIRDICRRLALEGYLAIAPELYFREGDPN--------DFADIPTLLSG 110
Query: 101 FEEAKPVIQALKCKGITATGA------------VGFCWGAKVA-VQLAKREFIQAAVLLH 147
P Q L A+ A GFCWG ++ + A ++AAV +
Sbjct: 111 LVAKVPDSQVLADLDHVASWASRNGGDVHRLMITGFCWGGRITWLYAAHNPQLKAAVAWY 170
Query: 148 PSFV----------TVDDIKGVEVPVSVLGAEIDPVSPPALVKEFEEALTAKSEVDSFVK 197
VD + PV L +D P V+ +AL A + + +
Sbjct: 171 GKLTGDKSLNSPKQPVDIATDLNAPVLGLYGGLDNSIPQESVETMRQALRA-ANAKAEII 229
Query: 198 IFPKVAHGWSVRYNVEDESAVKAAEEAHQNLLEWLAKH 235
++P H ++ Y +A +AE+ Q +LEW ++
Sbjct: 230 VYPDAGHAFNADYRPSYHAA--SAEDGWQRMLEWFKQY 265
>sp|Q8Z3B8|DLHH_SALTI Putative carboxymethylenebutenolidase OS=Salmonella typhi GN=ysgA
PE=3 SV=1
Length = 270
Score = 38.9 bits (89), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 87/218 (39%), Gaps = 37/218 (16%)
Query: 43 LLISDIFGYEAPNLRKLADKVAAAGFYVAVPDFF--HGDPHVDGGRSLQEWINDHGVDKG 100
+++ +IFG ++R + ++A G+ P+ + GDP+ ++ + + G
Sbjct: 60 IVVQEIFGVHE-HIRDICRRLALEGYLAIAPELYFREGDPN--------DFADIPTLLSG 110
Query: 101 FEEAKPVIQALKCKGITATGA------------VGFCWGAKVA-VQLAKREFIQAAVLLH 147
P Q L A+ A GFCWG ++ + A ++AAV +
Sbjct: 111 LVAKVPDSQVLADLDHVASWASRNGGDAHRLMITGFCWGGRITWLYAAHNPQLKAAVAWY 170
Query: 148 PSFV----------TVDDIKGVEVPVSVLGAEIDPVSPPALVKEFEEALTAKSEVDSFVK 197
V VD + PV L + D P V+ +AL A + V
Sbjct: 171 GKLVGDTSLNSPKHPVDIATDLNAPVLGLYSGQDTSIPQESVETMRQALRAANAKAEIV- 229
Query: 198 IFPKVAHGWSVRYNVEDESAVKAAEEAHQNLLEWLAKH 235
++P H ++ Y A +A++ Q +LEW A++
Sbjct: 230 VYPDAGHAFNADYRPGYHEA--SAKDGWQRMLEWFAQY 265
>sp|Q9L6M9|DLHH_SALTY Putative carboxymethylenebutenolidase OS=Salmonella typhimurium
(strain LT2 / SGSC1412 / ATCC 700720) GN=ysgA PE=3 SV=1
Length = 270
Score = 38.5 bits (88), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 86/218 (39%), Gaps = 37/218 (16%)
Query: 43 LLISDIFGYEAPNLRKLADKVAAAGFYVAVPDFF--HGDPHVDGGRSLQEWINDHGVDKG 100
+++ +IFG ++R + ++A G+ P+ + GDP+ ++ + + G
Sbjct: 60 IVVQEIFGVHE-HIRDICRRLALEGYLAIAPELYFREGDPN--------DFADIPTLLSG 110
Query: 101 FEEAKPVIQALKCKGITATGA------------VGFCWGAKVA-VQLAKREFIQAAVLLH 147
P Q L A+ A GFCWG ++ + A ++AAV +
Sbjct: 111 LVAKVPDSQVLADLDHVASWASRNGGDAHRLMITGFCWGGRITWLYAAHNPQLKAAVAWY 170
Query: 148 PSFV----------TVDDIKGVEVPVSVLGAEIDPVSPPALVKEFEEALTAKSEVDSFVK 197
V VD + PV L D P V+ +AL A + V
Sbjct: 171 GKLVGDTSLNSPKHPVDIATDLNAPVLGLYGGQDTSIPQESVETMRQALRAANAKAEIV- 229
Query: 198 IFPKVAHGWSVRYNVEDESAVKAAEEAHQNLLEWLAKH 235
++P H ++ Y A +A++ Q +LEW A++
Sbjct: 230 VYPDAGHAFNADYRPGYHEA--SAKDGWQRMLEWFAQY 265
>sp|P73163|DLHH_SYNY3 Putative carboxymethylenebutenolidase OS=Synechocystis sp. (strain
PCC 6803 / Kazusa) GN=sll1298 PE=3 SV=1
Length = 246
Score = 38.5 bits (88), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 90/223 (40%), Gaps = 40/223 (17%)
Query: 43 LLISDIFGYEAPNLRKLADKVAAAGFYVAV---------PDFFHG-DPH-VDGGRSLQEW 91
++I +IFG + ++R + ++VA G YVA+ P F G P ++ GR L++
Sbjct: 36 IVIQEIFGVNS-HIRDVTERVAKEG-YVAIAPAIYQRQAPGFEEGYTPEGIEAGRKLKDQ 93
Query: 92 INDHGVDKGFEEAKPVIQALKCKGITATGAVGFCWGAKVAVQLAKREFIQAAVLLH---- 147
+ + E Q L G +GFC+G + A ++A +
Sbjct: 94 TSSAEILSDLEATIAYAQTLPNVKPEEVGLIGFCFGGWIVYLGASLPTVKATASFYGAGI 153
Query: 148 ---------PSFVTVDDIKGVEVPVSVLGAEIDPVSPPALVKEFEEALTAKSEVDSFVKI 198
P D I+G + G E D P A ++ E+ALT K +V+ +
Sbjct: 154 PHWAPGTAEPPITYTDKIQGTL--YAFFGLE-DTSIPMADTEQIEQALT-KYQVNHKIFR 209
Query: 199 FPKVAHGW----SVRYNVEDESAVKAAEEAHQNLLEWLAKHVK 237
+P HG+ YN E AA +A Q + + +K
Sbjct: 210 YPGADHGFFCDQRASYNAE------AAADAWQKVKQLFQTELK 246
>sp|P56262|DLHH_ECOLI Putative carboxymethylenebutenolidase OS=Escherichia coli (strain
K12) GN=ysgA PE=3 SV=3
Length = 271
Score = 37.7 bits (86), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 46/218 (21%), Positives = 88/218 (40%), Gaps = 37/218 (16%)
Query: 43 LLISDIFGYEAPNLRKLADKVAAAGFYVAVPDFF--HGDPHVDGGRSLQEWINDHGVDKG 100
+++ +IFG ++R + ++A G+ P+ + GDP+ ++ + + G
Sbjct: 60 IVVQEIFGVHE-HIRDICRRLALEGYLAIAPELYFREGDPN--------DFADIPTLLSG 110
Query: 101 FEEAKPVIQALKCKGITATGA------------VGFCWGAKVA-VQLAKREFIQAAVLLH 147
P Q L A+ A GFCWG ++ + A ++AAV +
Sbjct: 111 LVAKVPDSQVLADLDHVASWASRNGGDVHRLMITGFCWGGRITWLYAAHNPQLKAAVAWY 170
Query: 148 PSFVTVDDIKGVEVPVSV---LGAEI-------DPVSPPALVKEFEEALTAKSEVDSFVK 197
+ + PV + L A I D P V+ +AL A + + +
Sbjct: 171 GKLTGDKSLNSPKQPVDIATDLNAPILGLYGGQDNSIPQESVETMRQALRA-ANAKAEII 229
Query: 198 IFPKVAHGWSVRYNVEDESAVKAAEEAHQNLLEWLAKH 235
++P H ++ Y +A +AE+ Q +LEW ++
Sbjct: 230 VYPDAGHAFNADYRPSYHAA--SAEDGWQRMLEWFKQY 265
>sp|A4IVS5|TRPA_FRATW Tryptophan synthase alpha chain OS=Francisella tularensis subsp.
tularensis (strain WY96-3418) GN=trpA PE=3 SV=1
Length = 269
Score = 32.3 bits (72), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 29/49 (59%)
Query: 26 GGLDTYVTGSPDSKLAALLISDIFGYEAPNLRKLADKVAAAGFYVAVPD 74
G++ + D+ + ++LI+D+ +E+ R +A KV+ A ++A PD
Sbjct: 110 NGIENFYQKCLDAGVDSILIADVPAHESKEFRDIAKKVSIAQIFIAPPD 158
>sp|Q8I7P9|POL5_DROME Retrovirus-related Pol polyprotein from transposon opus
OS=Drosophila melanogaster GN=pol PE=4 SV=1
Length = 1003
Score = 32.0 bits (71), Expect = 3.6, Method: Composition-based stats.
Identities = 24/76 (31%), Positives = 31/76 (40%), Gaps = 4/76 (5%)
Query: 128 AKVAVQLAKREFIQAAVLLHPSFVTVDDIKGVEVPVSVLGAEIDPVSPPALVKEFEEALT 187
A + V L K F+ V VT D IK V I + PP VKE + L
Sbjct: 308 ANLQVNLEKSHFLDTQVEFLGYIVTADGIKADPKKVRA----ISEMPPPTSVKELKRFLG 363
Query: 188 AKSEVDSFVKIFPKVA 203
S F++ + KVA
Sbjct: 364 MTSYYRKFIQDYAKVA 379
>sp|Q0BP46|TRPA_FRATO Tryptophan synthase alpha chain OS=Francisella tularensis subsp.
holarctica (strain OSU18) GN=trpA PE=3 SV=1
Length = 269
Score = 32.0 bits (71), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 28/49 (57%)
Query: 26 GGLDTYVTGSPDSKLAALLISDIFGYEAPNLRKLADKVAAAGFYVAVPD 74
G++ + D+ + ++LI+D+ +E+ R +A KV A ++A PD
Sbjct: 110 NGIENFYQKCLDAGVDSILIADVPAHESKEFRDIAKKVGIAQIFIAPPD 158
>sp|Q2A5V4|TRPA_FRATH Tryptophan synthase alpha chain OS=Francisella tularensis subsp.
holarctica (strain LVS) GN=trpA PE=3 SV=1
Length = 269
Score = 32.0 bits (71), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 28/49 (57%)
Query: 26 GGLDTYVTGSPDSKLAALLISDIFGYEAPNLRKLADKVAAAGFYVAVPD 74
G++ + D+ + ++LI+D+ +E+ R +A KV A ++A PD
Sbjct: 110 NGIENFYQKCLDAGVDSILIADVPAHESKEFRDIAKKVGIAQIFIAPPD 158
>sp|A7N9D1|TRPA_FRATF Tryptophan synthase alpha chain OS=Francisella tularensis subsp.
holarctica (strain FTNF002-00 / FTA) GN=trpA PE=3 SV=1
Length = 269
Score = 32.0 bits (71), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 28/49 (57%)
Query: 26 GGLDTYVTGSPDSKLAALLISDIFGYEAPNLRKLADKVAAAGFYVAVPD 74
G++ + D+ + ++LI+D+ +E+ R +A KV A ++A PD
Sbjct: 110 NGIENFYQKCLDAGVDSILIADVPAHESKEFRDIAKKVGIAQIFIAPPD 158
>sp|Q046E7|ALR_LACGA Alanine racemase OS=Lactobacillus gasseri (strain ATCC 33323 /
DSM 20243) GN=alr PE=3 SV=1
Length = 376
Score = 32.0 bits (71), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 27/39 (69%)
Query: 36 PDSKLAALLISDIFGYEAPNLRKLADKVAAAGFYVAVPD 74
P K+ A++ ++ +G+ A + K+AD++ AAGF VA+ D
Sbjct: 31 PGQKMLAVVKANGYGHGAVEVAKVADQIGAAGFCVAILD 69
>sp|Q5NE80|TRPA_FRATT Tryptophan synthase alpha chain OS=Francisella tularensis subsp.
tularensis (strain SCHU S4 / Schu 4) GN=trpA PE=3 SV=1
Length = 269
Score = 31.6 bits (70), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 28/49 (57%)
Query: 26 GGLDTYVTGSPDSKLAALLISDIFGYEAPNLRKLADKVAAAGFYVAVPD 74
G++ + D+ + ++LI+D+ +E+ R +A KV A ++A PD
Sbjct: 110 NGIENFYQKCLDAGVDSILIADVPAHESKEFRDIAKKVGIAQIFIAPPD 158
>sp|Q14FN3|TRPA_FRAT1 Tryptophan synthase alpha chain OS=Francisella tularensis subsp.
tularensis (strain FSC 198) GN=trpA PE=3 SV=1
Length = 269
Score = 31.6 bits (70), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 28/49 (57%)
Query: 26 GGLDTYVTGSPDSKLAALLISDIFGYEAPNLRKLADKVAAAGFYVAVPD 74
G++ + D+ + ++LI+D+ +E+ R +A KV A ++A PD
Sbjct: 110 NGIENFYQKCLDAGVDSILIADVPAHESKEFRDIAKKVGIAQIFIAPPD 158
>sp|B2SEK8|TRPA_FRATM Tryptophan synthase alpha chain OS=Francisella tularensis subsp.
mediasiatica (strain FSC147) GN=trpA PE=3 SV=1
Length = 269
Score = 31.6 bits (70), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 28/49 (57%)
Query: 26 GGLDTYVTGSPDSKLAALLISDIFGYEAPNLRKLADKVAAAGFYVAVPD 74
G++ + D+ + ++LI+D+ +E+ R +A KV A ++A PD
Sbjct: 110 NGIENFYQKCLDAGVDSILIADVPAHESKEFRDIAKKVGIAQIFIAPPD 158
>sp|Q97DY9|ALR2_CLOAB Alanine racemase 2 OS=Clostridium acetobutylicum (strain ATCC 824 /
DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787) GN=alr2 PE=3
SV=1
Length = 395
Score = 31.6 bits (70), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 41/83 (49%), Gaps = 13/83 (15%)
Query: 158 GVEVPVSVLGAEIDP----------VSPPALVKEFEEAL-TAKSEVDSFVKIFPKVAHGW 206
G++ P+ +L A I P + P +E EAL + S+ D+ VK+ K+ G
Sbjct: 98 GIKTPIMLL-APISPSQAAWVIRYNIIPMVDSEEIVEALDQSASQNDTIVKLHVKINTGL 156
Query: 207 SVRYNVEDESAVKAAEEAHQNLL 229
+ RY V E+AVK E H+ L
Sbjct: 157 N-RYGVNPENAVKFIREIHEKYL 178
>sp|Q5FMB2|ALR_LACAC Alanine racemase OS=Lactobacillus acidophilus (strain ATCC 700396
/ NCK56 / N2 / NCFM) GN=alr PE=3 SV=1
Length = 376
Score = 31.2 bits (69), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 27/39 (69%)
Query: 36 PDSKLAALLISDIFGYEAPNLRKLADKVAAAGFYVAVPD 74
P K+ A++ ++ +G+ A + K+A++V AAGF VAV D
Sbjct: 31 PGQKMLAVVKANAYGHGAVEVAKVAEEVGAAGFCVAVLD 69
>sp|O26859|Y765_METTH Miro domain-containing protein MTH_765 OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=MTH_765 PE=4 SV=1
Length = 152
Score = 30.8 bits (68), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 146 LHPSFVTVDDIKGVEVPVSVLGAEIDPVSPPALVKEFEEAL-TAKSEVDSFVKIFPKVA 203
L + + VD+ +GV + + AE+D + P +V ++ L ++ E+DS V++FP VA
Sbjct: 76 LDAAIIVVDNSRGVTLAEKEIMAELDEKNIPYVVFSNKQDLDDSELEIDSEVEVFPTVA 134
>sp|C0LGR3|Y4265_ARATH Probable LRR receptor-like serine/threonine-protein kinase
At4g26540 OS=Arabidopsis thaliana GN=At4g26540 PE=1 SV=1
Length = 1091
Score = 30.8 bits (68), Expect = 8.5, Method: Composition-based stats.
Identities = 16/58 (27%), Positives = 30/58 (51%), Gaps = 7/58 (12%)
Query: 49 FGYEAP---NLRKLADKVAAAGFYVAVPDFFHG----DPHVDGGRSLQEWINDHGVDK 99
+GY AP +++++ +K + V + + G DP + GG L +W+ DH +K
Sbjct: 931 YGYMAPEHASMQRITEKSDVYSYGVVLLEVLTGKHPLDPDLPGGAHLVKWVRDHLAEK 988
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.134 0.406
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 93,584,113
Number of Sequences: 539616
Number of extensions: 3893375
Number of successful extensions: 10675
Number of sequences better than 100.0: 42
Number of HSP's better than 100.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 10629
Number of HSP's gapped (non-prelim): 46
length of query: 237
length of database: 191,569,459
effective HSP length: 114
effective length of query: 123
effective length of database: 130,053,235
effective search space: 15996547905
effective search space used: 15996547905
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 59 (27.3 bits)