BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026511
(237 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O72539|DPOL_ADEB2 DNA polymerase OS=Bovine adenovirus 2 GN=POL PE=3 SV=1
Length = 1017
Score = 33.5 bits (75), Expect = 1.2, Method: Composition-based stats.
Identities = 27/101 (26%), Positives = 46/101 (45%), Gaps = 8/101 (7%)
Query: 58 RENKAKNA---QLARLSREESLSNLKLRVDEKKIISVNNLRGIARLVICSGPASYIMESF 114
+ +K KN +A+L + ++D KKI+ + L A I G S SF
Sbjct: 648 KADKEKNQTMRSIAKLLSNALYGSFATKLDNKKIVFSDQLEASASKTIARGNFSIKSSSF 707
Query: 115 KRSEPFTESLLERGVLVVSFTTDGNIPSFEFEESEEMKEFT 155
++ F+ ++ VV++ PS E +ES+E +E T
Sbjct: 708 IETDNFSAEIMPE--FVVTYPP---APSAELDESDENEEHT 743
>sp|Q5FMX8|RTPR_LACAC Adenosylcobalamin-dependent ribonucleoside-triphosphate reductase
OS=Lactobacillus acidophilus (strain ATCC 700396 / NCK56
/ N2 / NCFM) GN=rtpR PE=3 SV=1
Length = 744
Score = 33.5 bits (75), Expect = 1.3, Method: Composition-based stats.
Identities = 38/143 (26%), Positives = 57/143 (39%), Gaps = 45/143 (31%)
Query: 116 RSEPFTESLLERGVLVVSFTTDGNI---PSFEFEESEE-MKEFTRKRKRLWQLT------ 165
RSE + E+ V +GN+ P + SEE + E T + K+L++LT
Sbjct: 45 RSENWDET--------VKRVIEGNVNLDPRLQGTPSEEVINELTNEAKQLFRLTYGLSAT 96
Query: 166 PVYVSEWSKWLDEQKRTA---------GISPES-------PVYLSLR-----------LD 198
P + W D QKRT I P+ P Y+ R D
Sbjct: 97 PSGRNLWISGTDYQKRTGDSLNNCWFIAIRPQEYGDSHIVPTYIDKREKAVSMPFSFLFD 156
Query: 199 GRVRGSGVGYPPWNAFVAQLPPV 221
++G GVG+ N+ + Q+P V
Sbjct: 157 QLMKGGGVGFSVVNSNIKQIPKV 179
>sp|Q9VI55|UFL1_DROME E3 UFM1-protein ligase 1 homolog OS=Drosophila melanogaster
GN=CG1104 PE=1 SV=1
Length = 782
Score = 33.5 bits (75), Expect = 1.4, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 35/56 (62%)
Query: 33 ADVPEILKGLSIDVSAVSLFAFLYSRENKAKNAQLARLSREESLSNLKLRVDEKKI 88
A++ E+ K L++D+S + L A S EN++ + L +L E+ +S++ ++EK +
Sbjct: 77 ANLVEVSKTLNVDLSRIELLAERISAENQSVHLVLGQLIDEDYISHIAQEINEKLV 132
>sp|Q43794|SYE_TOBAC Glutamate--tRNA ligase, chloroplastic/mitochondrial OS=Nicotiana
tabacum PE=2 SV=1
Length = 569
Score = 33.1 bits (74), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 43/91 (47%), Gaps = 19/91 (20%)
Query: 120 FTESLLERGVLVVSFTTDGNIPSFEFEESEEMKEFTRKRKRLWQLTPVYVSEWSKWLDEQ 179
F E LL+ G + F ++ EE E+MKE + L QL PVY W+ +E+
Sbjct: 146 FAEKLLQSGHVYRCFCSN--------EELEKMKEIAK----LKQLPPVYTGRWASATEEE 193
Query: 180 --KRTAGISPES-----PVYLSLRLDGRVRG 203
+ A +P + P SL++D +RG
Sbjct: 194 VVEELAKGTPYTYRFRVPKEGSLKIDDLIRG 224
>sp|Q2YVR0|Y390_STAAB Uncharacterized lipoprotein SAB0390/SAB0391 OS=Staphylococcus
aureus (strain bovine RF122 / ET3-1) GN=SAB0390/SAB0391
PE=3 SV=2
Length = 260
Score = 32.7 bits (73), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 20/76 (26%)
Query: 133 SFTTDGNIPSFEFEESEEMKEFTRKRKRLWQLTPVYVSEWSKWLDEQKRTAGISPESPVY 192
S TT+ N+PS+E E ++ K+L ++ P+ + +SPV
Sbjct: 175 SITTNENVPSYEAEF--KLNNSDENVKKLREVYPI-----------------TTKKSPV- 214
Query: 193 LSLRLDGRVRGSGVGY 208
L L +DG ++GS +GY
Sbjct: 215 LKLHIDGDIKGSSIGY 230
>sp|Q6GJN3|Y438_STAAR Uncharacterized lipoprotein SAR0438 OS=Staphylococcus aureus
(strain MRSA252) GN=SAR0438 PE=3 SV=2
Length = 260
Score = 32.7 bits (73), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 20/76 (26%)
Query: 133 SFTTDGNIPSFEFEESEEMKEFTRKRKRLWQLTPVYVSEWSKWLDEQKRTAGISPESPVY 192
S TT+ NIPS+E E ++ K+L + P+ + ++P+
Sbjct: 175 SITTNENIPSYEAEY--KLNNSDENVKKLRDIYPI-----------------TTKKAPI- 214
Query: 193 LSLRLDGRVRGSGVGY 208
L L +DG ++GS VGY
Sbjct: 215 LKLHIDGDIKGSSVGY 230
>sp|Q2FJJ6|Y419_STAA3 Uncharacterized lipoprotein SAUSA300_0419 OS=Staphylococcus aureus
(strain USA300) GN=SAUSA300_0419 PE=3 SV=1
Length = 270
Score = 32.3 bits (72), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 20/76 (26%)
Query: 133 SFTTDGNIPSFEFEESEEMKEFTRKRKRLWQLTPVYVSEWSKWLDEQKRTAGISPESPVY 192
+ TT+ N+PS+E + +M + K+L ++ P+ T SP
Sbjct: 183 NITTNENVPSYEAQY--KMNNSDKNVKKLREIYPI--------------TTNNSPN---- 222
Query: 193 LSLRLDGRVRGSGVGY 208
L L +DG ++GS VGY
Sbjct: 223 LKLYIDGDIKGSSVGY 238
>sp|Q5HIN1|Y486_STAAC Uncharacterized lipoprotein SACOL0486 OS=Staphylococcus aureus
(strain COL) GN=SACOL0486 PE=3 SV=2
Length = 270
Score = 32.3 bits (72), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 20/76 (26%)
Query: 133 SFTTDGNIPSFEFEESEEMKEFTRKRKRLWQLTPVYVSEWSKWLDEQKRTAGISPESPVY 192
+ TT+ N+PS+E + +M + K+L ++ P+ T SP
Sbjct: 183 NITTNENVPSYEAQY--KMNNSDKNVKKLREIYPI--------------TTNNSPN---- 222
Query: 193 LSLRLDGRVRGSGVGY 208
L L +DG ++GS VGY
Sbjct: 223 LKLYIDGDIKGSSVGY 238
>sp|Q2G0W9|Y405_STAA8 Uncharacterized lipoprotein SAOUHSC_00405 OS=Staphylococcus aureus
(strain NCTC 8325) GN=SAOUHSC_00405 PE=3 SV=2
Length = 270
Score = 32.3 bits (72), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 20/76 (26%)
Query: 133 SFTTDGNIPSFEFEESEEMKEFTRKRKRLWQLTPVYVSEWSKWLDEQKRTAGISPESPVY 192
+ TT+ N+PS+E + +M + K+L ++ P+ T SP
Sbjct: 183 NITTNENVPSYEAQY--KMNNSDKNVKKLREIYPI--------------TTNNSPN---- 222
Query: 193 LSLRLDGRVRGSGVGY 208
L L +DG ++GS VGY
Sbjct: 223 LKLYIDGDIKGSSVGY 238
>sp|B2KI42|CADH2_RHIFE Cadherin-2 OS=Rhinolophus ferrumequinum GN=CDH2 PE=3 SV=1
Length = 906
Score = 31.2 bits (69), Expect = 6.0, Method: Composition-based stats.
Identities = 33/135 (24%), Positives = 56/135 (41%), Gaps = 25/135 (18%)
Query: 109 YIMESFKRSEPFTESLL--------ERGVLVVSFTTDGNIPSFEFEESEEMKEFT----- 155
Y + SF S + L+ E+ + V + N+P +ES+E++E
Sbjct: 88 YAVRSFPLSSEHAKFLIYAQDKETQEKWQVAVKLSLKPNLPEDSVKESQEIEEIVFPRQL 147
Query: 156 -------RKRKRLWQLTPVYVSEWSKWLDEQKRTAGISPESPVYLSLRLDGRVRGSGVGY 208
+++KR W + P+ + E S+ Q+ I + LSLR V G G
Sbjct: 148 MKHNGHLQRQKRDWVIPPINLPENSRGPFPQELVR-IRSDRDKNLSLRYS--VTGPGADQ 204
Query: 209 PPWNAFVAQLPPVKG 223
PP F+ + P+ G
Sbjct: 205 PPTGIFI--INPISG 217
>sp|B3LYC0|UFL1_DROAN E3 UFM1-protein ligase 1 homolog OS=Drosophila ananassae GN=GF17327
PE=3 SV=1
Length = 784
Score = 31.2 bits (69), Expect = 6.8, Method: Composition-based stats.
Identities = 16/54 (29%), Positives = 33/54 (61%)
Query: 33 ADVPEILKGLSIDVSAVSLFAFLYSRENKAKNAQLARLSREESLSNLKLRVDEK 86
A++ E+ K L++D+S V A + EN + + +L +L EE ++++ ++EK
Sbjct: 77 ANLVEVSKALNVDLSRVVSLAERIAAENPSIHLELGQLIDEEYITHIAQEINEK 130
>sp|B3P2S2|UFL1_DROER E3 UFM1-protein ligase 1 homolog OS=Drosophila erecta GN=GG10135
PE=3 SV=1
Length = 782
Score = 30.8 bits (68), Expect = 9.3, Method: Composition-based stats.
Identities = 15/57 (26%), Positives = 35/57 (61%)
Query: 33 ADVPEILKGLSIDVSAVSLFAFLYSRENKAKNAQLARLSREESLSNLKLRVDEKKII 89
A++ E+ K L++D+S + + A + EN + + L +L E+ +S++ ++EK ++
Sbjct: 77 ANLVEVSKTLNVDLSRIEVLAERIAAENPSVHLVLGQLIDEDYISHIAQEINEKLVL 133
>sp|B4PS24|UFL1_DROYA E3 UFM1-protein ligase 1 homolog OS=Drosophila yakuba GN=GE25823
PE=3 SV=1
Length = 784
Score = 30.8 bits (68), Expect = 9.6, Method: Composition-based stats.
Identities = 15/57 (26%), Positives = 35/57 (61%)
Query: 33 ADVPEILKGLSIDVSAVSLFAFLYSRENKAKNAQLARLSREESLSNLKLRVDEKKII 89
A++ E+ K L++D+S + + A + EN + + L +L E+ +S++ ++EK ++
Sbjct: 78 ANLVEVSKTLNVDLSRIEVLAERIAAENPSVHLVLGQLIDEDYISHIAQEINEKLVL 134
>sp|Q54FN7|PKS33_DICDI Probable polyketide synthase 33 OS=Dictyostelium discoideum GN=pks33
PE=3 SV=2
Length = 3127
Score = 30.4 bits (67), Expect = 9.9, Method: Composition-based stats.
Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
Query: 78 NLKLRVDEKKIISVNNLRGIARLVICSGPASYIMESFKRSEPFTESLLERGVLVVSFTTD 137
NLK +E KI+++NN+ I +L I + + ++ F F E G F
Sbjct: 2839 NLKSSYEESKIVNINNVNQIIKLSISNNSSQKLIVHFSSLAVFINHPFEDG---EDFEET 2895
Query: 138 GNIPSF 143
+PSF
Sbjct: 2896 NIVPSF 2901
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.136 0.396
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 87,498,905
Number of Sequences: 539616
Number of extensions: 3527172
Number of successful extensions: 9791
Number of sequences better than 100.0: 22
Number of HSP's better than 100.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 9776
Number of HSP's gapped (non-prelim): 28
length of query: 237
length of database: 191,569,459
effective HSP length: 114
effective length of query: 123
effective length of database: 130,053,235
effective search space: 15996547905
effective search space used: 15996547905
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)