BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026512
(237 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8W487|YB95_ARATH Uncharacterized protein At2g39795, mitochondrial OS=Arabidopsis
thaliana GN=At2g39795 PE=1 SV=1
Length = 250
Score = 90.9 bits (224), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 104/203 (51%), Gaps = 16/203 (7%)
Query: 45 NYISEMRKSAFEGNILRLLRNEIQYELERS---SPKQPITKFNSFTVDDRPGEQWVRLTR 101
NY + + + + E ++R++ +EI L+ S ++ F ++D+PG Q V LTR
Sbjct: 51 NYSTAIDRISSEQTLIRVIDSEINSALQSDNIDSDEEMTPGSFPFRIEDKPGNQNVTLTR 110
Query: 102 KFGENEDIKIEATM----FDGSIPVSKAGVGEDVKLHSTLIVNISKGDEEVLEMMCSAWP 157
+ E IK+ +M D + G + L+V ++K LE C A+P
Sbjct: 111 DYN-GEHIKVVVSMPSLVSDENDDDDDDDEGPSNESSIPLVVTVTKKSGLTLEFSCMAFP 169
Query: 158 DSIEITKLFVRG-----NDKLSADPYVGPEFKELDDELQDSLYEFLEERGINEQLTAFLH 212
D I I L V+ D+L+ + GP+F++LD+ L+ + Y+FLE RG+ T FLH
Sbjct: 170 DEIAIDALSVKHPGDSLEDQLANE---GPDFEDLDENLKKTFYKFLEIRGVKASTTNFLH 226
Query: 213 EYLKNKDKTEFVRWMQAVKSYIE 235
EY+ K E+ W++ VK ++E
Sbjct: 227 EYMTRKVNREYFLWLKNVKEFME 249
>sp|O22288|Y2979_ARATH Uncharacterized protein At2g39790, mitochondrial OS=Arabidopsis
thaliana GN=At2g39790 PE=3 SV=2
Length = 240
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 79/149 (53%), Gaps = 5/149 (3%)
Query: 88 VDDRPGEQWVRLTRKFGENEDIKIEATM-FDGSIPVSKAGVGEDVKLHSTLIVNISKGDE 146
+ D+PG+Q V LT + + E I ++ M + G + G D +L L+V + K +
Sbjct: 95 IRDKPGDQSVTLTAYYND-ERIHVDVGMPYLGDDVIDVFGPNND-ELSFPLVVTVIKKNG 152
Query: 147 EVLEMMCSAWPDSIEITKLFVRGNDKLSADPYVGPEFKELDDELQDSLYEFLEERGINEQ 206
+E C A+ D I++T L V + + P FK LDD L+ + + +L R ++
Sbjct: 153 VSIEFTCQAYADYIDLTDLTVH-DYQYQMGETDWPRFKNLDDNLKKAFHRYLATR-LDAN 210
Query: 207 LTAFLHEYLKNKDKTEFVRWMQAVKSYIE 235
+T LH+Y+ +K K E++ W++ V +++
Sbjct: 211 ITKLLHKYMVSKIKREYLLWLKNVNKFVD 239
>sp|O94675|MAM33_SCHPO Mitochondrial acidic protein mam33 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPBC776.07 PE=3 SV=1
Length = 269
Score = 64.7 bits (156), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 62/117 (52%), Gaps = 11/117 (9%)
Query: 129 EDVKLHSTLIVNISKGDEEVLEMMCSAWPDSIEITKL-FVRGNDKLSADP---------- 177
ED+ + ISK L +A D +I + F + D L++D
Sbjct: 152 EDLGRFQPCTIEISKPGNGALVFEATALDDGFDIENIYFSKDIDMLTSDSLEAEWKRRKQ 211
Query: 178 YVGPEFKELDDELQDSLYEFLEERGINEQLTAFLHEYLKNKDKTEFVRWMQAVKSYI 234
Y+GP FKELD ELQD + +LEER I+E L++F+ + K+ E++ W+++V+ ++
Sbjct: 212 YLGPSFKELDPELQDLFHSYLEERKIDESLSSFIVSFGLTKELKEYINWLESVRQFL 268
>sp|P40513|MAM33_YEAST Mitochondrial acidic protein MAM33 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=MAM33 PE=1 SV=1
Length = 266
Score = 60.1 bits (144), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 39/57 (68%)
Query: 178 YVGPEFKELDDELQDSLYEFLEERGINEQLTAFLHEYLKNKDKTEFVRWMQAVKSYI 234
Y GP F LD+ELQ+SL +LE RG+NE+L +F+ Y + K+ E++ W++ +K +
Sbjct: 209 YHGPPFSNLDEELQESLEAYLESRGVNEELASFISAYSEFKENNEYISWLEKMKKFF 265
>sp|Q54JD2|Y8137_DICDI Putative uncharacterized protein DDB_G0288137 OS=Dictyostelium
discoideum GN=DDB_G0288137 PE=4 SV=1
Length = 321
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 51/110 (46%), Gaps = 4/110 (3%)
Query: 126 GVGEDVKLHSTLIVNISKGDEEV-LEMMCSAWPDSIEITKLFVRGNDKLSADPYVGPEFK 184
G ED H I KG+ L C A D F +G + +P +
Sbjct: 212 GAEEDSHEHPFEIEVTPKGNASGKLTFGCYASHDGNYTVSGFYKGGFGETVNPV---DIG 268
Query: 185 ELDDELQDSLYEFLEERGINEQLTAFLHEYLKNKDKTEFVRWMQAVKSYI 234
E QD++ L++ GINE+L+ F+H+Y+ NK ++V +A+K ++
Sbjct: 269 GTSMEFQDNILLVLQQYGINERLSFFIHDYVHNKKINDYVESFEALKDFV 318
>sp|Q21018|CRI3_CAEEL Conserved regulator of innate immunity protein 3 OS=Caenorhabditis
elegans GN=cri-3 PE=1 SV=2
Length = 236
Score = 39.3 bits (90), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 105/254 (41%), Gaps = 44/254 (17%)
Query: 2 ASLTRSLKRCQLLTKSMLLNSTKQNPSLFKSNLRNPVSQISKRNYISEMRKSAFEGNILR 61
ASL RSL R L + + V + R++ + + + +
Sbjct: 4 ASLVRSLSRVALRSSQV-------------------VRMAAPRHFSQSAKVLSVTPELQQ 44
Query: 62 LLRNEIQYELERSSPK---QPITKFNSFTVDDRPGEQWVRLTRKFGENEDIKI------E 112
L EI+ E + SS F F V ++ E VRLT+K G +EDI +
Sbjct: 45 ALNREIEAEQQLSSDNLQGAVAPTFAGFQVTNKDAE--VRLTKKNG-SEDILVVFNVNHS 101
Query: 113 ATMFDGSIPVSKAGVGEDVKLHSTLIVNISKGDEEV---LEMM-CSAWPDSIE--ITKLF 166
M +G V V I+KGD+ + LE++ PD + + + +
Sbjct: 102 VDMDEGFDDEPSQAVAPVPVAMPPFTVEITKGDQRLCFHLELVPVDDQPDEYDFRVEEFY 161
Query: 167 V-----RGNDKLSADPYVGPEFKELDDELQDSLY-EFLEERGINEQLTAFLHEYLKNKDK 220
V GN+ + ++ Y K +D +L D L+ +LEERG++ + L Y + +
Sbjct: 162 VAPSAKNGNEDVPSEVYAS-SGKYIDPDLHDLLFVRYLEERGLDARFCKTLVAYATHYEH 220
Query: 221 TEFVRWMQAVKSYI 234
+++V + +K +I
Sbjct: 221 SQYVGLLDKIKKFI 234
>sp|Q7NVN5|CYSN_CHRVO Sulfate adenylyltransferase subunit 1 OS=Chromobacterium violaceum
(strain ATCC 12472 / DSM 30191 / JCM 1249 / NBRC 12614 /
NCIMB 9131 / NCTC 9757) GN=cysN PE=3 SV=1
Length = 477
Score = 32.7 bits (73), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 58/124 (46%), Gaps = 20/124 (16%)
Query: 37 PVSQISKRNYISEMRKSA-FEG-NILRLLRN-EIQYELERSSPKQPITKFNSFTVDDR-- 91
P+S + N +S + ++G ++ LL +I ++ S+ + P+ N +D R
Sbjct: 200 PISALRGDNVVSRTEAAPWYQGATLMHLLETVQISHDAPLSAFRLPVQYVNRPNLDFRGF 259
Query: 92 ----------PGEQWVRLTRKFGENEDIKIEATMFDGSIPVSKAGVGEDVKLHSTLIVNI 141
PG+ V L G+ +K E FDGS+ S+AG G+ V L ++I
Sbjct: 260 CGTIASGAVHPGDAVVALPS--GKESRVK-EIVTFDGSL--SRAGAGQAVTLTLEDEIDI 314
Query: 142 SKGD 145
S+GD
Sbjct: 315 SRGD 318
>sp|O35658|C1QBP_MOUSE Complement component 1 Q subcomponent-binding protein,
mitochondrial OS=Mus musculus GN=C1qbp PE=1 SV=1
Length = 278
Score = 32.0 bits (71), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 30/52 (57%)
Query: 186 LDDELQDSLYEFLEERGINEQLTAFLHEYLKNKDKTEFVRWMQAVKSYIENK 237
LD L D L +FL +RG++ L E + E++ +++ +KS+++N+
Sbjct: 227 LDWALYDHLMDFLADRGVDNTFADELVELSTALEHQEYITFLEDLKSFVKNQ 278
>sp|B5XJ51|RL6_STRPZ 50S ribosomal protein L6 OS=Streptococcus pyogenes serotype M49
(strain NZ131) GN=rplF PE=3 SV=1
Length = 178
Score = 30.8 bits (68), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 47/92 (51%), Gaps = 16/92 (17%)
Query: 84 NSFTVDDRPGEQWVRLTRKFGENEDIKIEATMFDGSIPVSKAGVGEDVK-LHST------ 136
N TV GE LTR+F +N +IK+E T I V + +++K +H T
Sbjct: 22 NVITVKGPKGE----LTREFNKNIEIKVEGT----EITVVRPNDSKEMKTIHGTTRANLN 73
Query: 137 -LIVNISKGDEEVLEMMCSAWPDSIEITKLFV 167
++V +S+G ++ LEM + ++ TKL +
Sbjct: 74 NMVVGVSEGFKKDLEMKGVGYRAQLQGTKLVL 105
>sp|P0DE59|RL6_STRPQ 50S ribosomal protein L6 OS=Streptococcus pyogenes serotype M3
(strain SSI-1) GN=rplF PE=3 SV=1
Length = 178
Score = 30.8 bits (68), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 47/92 (51%), Gaps = 16/92 (17%)
Query: 84 NSFTVDDRPGEQWVRLTRKFGENEDIKIEATMFDGSIPVSKAGVGEDVK-LHST------ 136
N TV GE LTR+F +N +IK+E T I V + +++K +H T
Sbjct: 22 NVITVKGPKGE----LTREFNKNIEIKVEGT----EITVVRPNDSKEMKTIHGTTRANLN 73
Query: 137 -LIVNISKGDEEVLEMMCSAWPDSIEITKLFV 167
++V +S+G ++ LEM + ++ TKL +
Sbjct: 74 NMVVGVSEGFKKDLEMKGVGYRAQLQGTKLVL 105
>sp|Q48VT4|RL6_STRPM 50S ribosomal protein L6 OS=Streptococcus pyogenes serotype M28
(strain MGAS6180) GN=rplF PE=3 SV=1
Length = 178
Score = 30.8 bits (68), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 47/92 (51%), Gaps = 16/92 (17%)
Query: 84 NSFTVDDRPGEQWVRLTRKFGENEDIKIEATMFDGSIPVSKAGVGEDVK-LHST------ 136
N TV GE LTR+F +N +IK+E T I V + +++K +H T
Sbjct: 22 NVITVKGPKGE----LTREFNKNIEIKVEGT----EITVVRPNDSKEMKTIHGTTRANLN 73
Query: 137 -LIVNISKGDEEVLEMMCSAWPDSIEITKLFV 167
++V +S+G ++ LEM + ++ TKL +
Sbjct: 74 NMVVGVSEGFKKDLEMKGVGYRAQLQGTKLVL 105
>sp|A2RC29|RL6_STRPG 50S ribosomal protein L6 OS=Streptococcus pyogenes serotype M5
(strain Manfredo) GN=rplF PE=3 SV=1
Length = 178
Score = 30.8 bits (68), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 47/92 (51%), Gaps = 16/92 (17%)
Query: 84 NSFTVDDRPGEQWVRLTRKFGENEDIKIEATMFDGSIPVSKAGVGEDVK-LHST------ 136
N TV GE LTR+F +N +IK+E T I V + +++K +H T
Sbjct: 22 NVITVKGPKGE----LTREFNKNIEIKVEGT----EITVVRPNDSKEMKTIHGTTRANLN 73
Query: 137 -LIVNISKGDEEVLEMMCSAWPDSIEITKLFV 167
++V +S+G ++ LEM + ++ TKL +
Sbjct: 74 NMVVGVSEGFKKDLEMKGVGYRAQLQGTKLVL 105
>sp|Q1J8Z8|RL6_STRPF 50S ribosomal protein L6 OS=Streptococcus pyogenes serotype M4
(strain MGAS10750) GN=rplF PE=3 SV=1
Length = 178
Score = 30.8 bits (68), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 47/92 (51%), Gaps = 16/92 (17%)
Query: 84 NSFTVDDRPGEQWVRLTRKFGENEDIKIEATMFDGSIPVSKAGVGEDVK-LHST------ 136
N TV GE LTR+F +N +IK+E T I V + +++K +H T
Sbjct: 22 NVITVKGPKGE----LTREFNKNIEIKVEGT----EITVVRPNDSKEMKTIHGTTRANLN 73
Query: 137 -LIVNISKGDEEVLEMMCSAWPDSIEITKLFV 167
++V +S+G ++ LEM + ++ TKL +
Sbjct: 74 NMVVGVSEGFKKDLEMKGVGYRAQLQGTKLVL 105
>sp|Q1JJ47|RL6_STRPD 50S ribosomal protein L6 OS=Streptococcus pyogenes serotype M2
(strain MGAS10270) GN=rplF PE=3 SV=1
Length = 178
Score = 30.8 bits (68), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 47/92 (51%), Gaps = 16/92 (17%)
Query: 84 NSFTVDDRPGEQWVRLTRKFGENEDIKIEATMFDGSIPVSKAGVGEDVK-LHST------ 136
N TV GE LTR+F +N +IK+E T I V + +++K +H T
Sbjct: 22 NVITVKGPKGE----LTREFNKNIEIKVEGT----EITVVRPNDSKEMKTIHGTTRANLN 73
Query: 137 -LIVNISKGDEEVLEMMCSAWPDSIEITKLFV 167
++V +S+G ++ LEM + ++ TKL +
Sbjct: 74 NMVVGVSEGFKKDLEMKGVGYRAQLQGTKLVL 105
>sp|Q1JP02|RL6_STRPC 50S ribosomal protein L6 OS=Streptococcus pyogenes serotype M12
(strain MGAS9429) GN=rplF PE=3 SV=1
Length = 178
Score = 30.8 bits (68), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 47/92 (51%), Gaps = 16/92 (17%)
Query: 84 NSFTVDDRPGEQWVRLTRKFGENEDIKIEATMFDGSIPVSKAGVGEDVK-LHST------ 136
N TV GE LTR+F +N +IK+E T I V + +++K +H T
Sbjct: 22 NVITVKGPKGE----LTREFNKNIEIKVEGT----EITVVRPNDSKEMKTIHGTTRANLN 73
Query: 137 -LIVNISKGDEEVLEMMCSAWPDSIEITKLFV 167
++V +S+G ++ LEM + ++ TKL +
Sbjct: 74 NMVVGVSEGFKKDLEMKGVGYRAQLQGTKLVL 105
>sp|Q1JE44|RL6_STRPB 50S ribosomal protein L6 OS=Streptococcus pyogenes serotype M12
(strain MGAS2096) GN=rplF PE=3 SV=1
Length = 178
Score = 30.8 bits (68), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 47/92 (51%), Gaps = 16/92 (17%)
Query: 84 NSFTVDDRPGEQWVRLTRKFGENEDIKIEATMFDGSIPVSKAGVGEDVK-LHST------ 136
N TV GE LTR+F +N +IK+E T I V + +++K +H T
Sbjct: 22 NVITVKGPKGE----LTREFNKNIEIKVEGT----EITVVRPNDSKEMKTIHGTTRANLN 73
Query: 137 -LIVNISKGDEEVLEMMCSAWPDSIEITKLFV 167
++V +S+G ++ LEM + ++ TKL +
Sbjct: 74 NMVVGVSEGFKKDLEMKGVGYRAQLQGTKLVL 105
>sp|Q7CNP4|RL6_STRP8 50S ribosomal protein L6 OS=Streptococcus pyogenes serotype M18
(strain MGAS8232) GN=rplF PE=3 SV=1
Length = 178
Score = 30.8 bits (68), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 47/92 (51%), Gaps = 16/92 (17%)
Query: 84 NSFTVDDRPGEQWVRLTRKFGENEDIKIEATMFDGSIPVSKAGVGEDVK-LHST------ 136
N TV GE LTR+F +N +IK+E T I V + +++K +H T
Sbjct: 22 NVITVKGPKGE----LTREFNKNIEIKVEGT----EITVVRPNDSKEMKTIHGTTRANLN 73
Query: 137 -LIVNISKGDEEVLEMMCSAWPDSIEITKLFV 167
++V +S+G ++ LEM + ++ TKL +
Sbjct: 74 NMVVGVSEGFKKDLEMKGVGYRAQLQGTKLVL 105
>sp|Q5XEC0|RL6_STRP6 50S ribosomal protein L6 OS=Streptococcus pyogenes serotype M6
(strain ATCC BAA-946 / MGAS10394) GN=rplF PE=3 SV=1
Length = 178
Score = 30.8 bits (68), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 47/92 (51%), Gaps = 16/92 (17%)
Query: 84 NSFTVDDRPGEQWVRLTRKFGENEDIKIEATMFDGSIPVSKAGVGEDVK-LHST------ 136
N TV GE LTR+F +N +IK+E T I V + +++K +H T
Sbjct: 22 NVITVKGPKGE----LTREFNKNIEIKVEGT----EITVVRPNDSKEMKTIHGTTRANLN 73
Query: 137 -LIVNISKGDEEVLEMMCSAWPDSIEITKLFV 167
++V +S+G ++ LEM + ++ TKL +
Sbjct: 74 NMVVGVSEGFKKDLEMKGVGYRAQLQGTKLVL 105
>sp|P0DE58|RL6_STRP3 50S ribosomal protein L6 OS=Streptococcus pyogenes serotype M3
(strain ATCC BAA-595 / MGAS315) GN=rplF PE=3 SV=1
Length = 178
Score = 30.8 bits (68), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 47/92 (51%), Gaps = 16/92 (17%)
Query: 84 NSFTVDDRPGEQWVRLTRKFGENEDIKIEATMFDGSIPVSKAGVGEDVK-LHST------ 136
N TV GE LTR+F +N +IK+E T I V + +++K +H T
Sbjct: 22 NVITVKGPKGE----LTREFNKNIEIKVEGT----EITVVRPNDSKEMKTIHGTTRANLN 73
Query: 137 -LIVNISKGDEEVLEMMCSAWPDSIEITKLFV 167
++V +S+G ++ LEM + ++ TKL +
Sbjct: 74 NMVVGVSEGFKKDLEMKGVGYRAQLQGTKLVL 105
>sp|Q9A1V9|RL6_STRP1 50S ribosomal protein L6 OS=Streptococcus pyogenes serotype M1
GN=rplF PE=3 SV=1
Length = 178
Score = 30.8 bits (68), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 47/92 (51%), Gaps = 16/92 (17%)
Query: 84 NSFTVDDRPGEQWVRLTRKFGENEDIKIEATMFDGSIPVSKAGVGEDVK-LHST------ 136
N TV GE LTR+F +N +IK+E T I V + +++K +H T
Sbjct: 22 NVITVKGPKGE----LTREFNKNIEIKVEGT----EITVVRPNDSKEMKTIHGTTRANLN 73
Query: 137 -LIVNISKGDEEVLEMMCSAWPDSIEITKLFV 167
++V +S+G ++ LEM + ++ TKL +
Sbjct: 74 NMVVGVSEGFKKDLEMKGVGYRAQLQGTKLVL 105
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.132 0.372
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 85,769,230
Number of Sequences: 539616
Number of extensions: 3628471
Number of successful extensions: 8304
Number of sequences better than 100.0: 35
Number of HSP's better than 100.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 26
Number of HSP's that attempted gapping in prelim test: 8291
Number of HSP's gapped (non-prelim): 35
length of query: 237
length of database: 191,569,459
effective HSP length: 114
effective length of query: 123
effective length of database: 130,053,235
effective search space: 15996547905
effective search space used: 15996547905
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 59 (27.3 bits)