Your job contains 1 sequence.
>026513
MGEQCNWIKKTQQSFHPVEVTKGLWIVPEWGAPPDVQATNIILNPGLAFGSGEHATTKLC
LLLLRRLIKGGELFLDYGTGSGILGIAAIKFGAAMSVGADIDPQAIKSAHQNAALNNIGP
KKMKLHLVPDRTFTASMNERVDGVVEDLSSHKIRGISQTEKYDVVIANILLNPLLQLADH
IVSYAKPGAVVGISGILSEQLPHIINRYSEFLEDILVSEMDDWTCVSGKKKRVKEDH
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 026513
(237 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2154739 - symbol:AT5G53920 species:3702 "Arabi... 664 3.2e-65 1
TIGR_CMR|VC_0293 - symbol:VC_0293 "ribosomal protein L11 ... 281 1.2e-24 1
UNIPROTKB|P0A8T1 - symbol:prmA "methyltransferase for 50S... 280 1.6e-24 1
TIGR_CMR|SO_0395 - symbol:SO_0395 "ribosomal protein L11 ... 265 6.1e-23 1
TIGR_CMR|CPS_0540 - symbol:CPS_0540 "ribosomal protein L1... 263 1.0e-22 1
TIGR_CMR|BA_4537 - symbol:BA_4537 "ribosomal protein L11 ... 214 1.6e-17 1
TIGR_CMR|CJE_1260 - symbol:CJE_1260 "ribosomal protein L1... 161 1.3e-16 2
TIGR_CMR|GSU_0447 - symbol:GSU_0447 "ribosomal protein L1... 202 2.9e-16 1
TIGR_CMR|CHY_0417 - symbol:CHY_0417 "ribosomal protein L1... 200 4.7e-16 1
TIGR_CMR|GSU_3320 - symbol:GSU_3320 "ribosomal protein L1... 158 1.3e-11 1
TIGR_CMR|SPO_3120 - symbol:SPO_3120 "ribosomal protein L1... 114 1.5e-10 2
UNIPROTKB|Q889R2 - symbol:PSPTO_0687 "Conserved domain pr... 116 4.7e-05 1
>TAIR|locus:2154739 [details] [associations]
symbol:AT5G53920 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006479 "protein
methylation" evidence=IEA] [GO:0008276 "protein methyltransferase
activity" evidence=IEA] [GO:0006744 "ubiquinone biosynthetic
process" evidence=RCA] InterPro:IPR004498 InterPro:IPR010456
Pfam:PF06325 HAMAP:MF_00735 GO:GO:0005737 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0008276 EMBL:AB007644 HSSP:Q84BQ9
eggNOG:COG2264 PANTHER:PTHR18895:SF3 TIGRFAMs:TIGR00406
HOGENOM:HOG000007390 UniGene:At.29528 UniGene:At.60677
IPI:IPI00544688 RefSeq:NP_200203.1 ProteinModelPortal:Q9FN34
SMR:Q9FN34 STRING:Q9FN34 PaxDb:Q9FN34 PRIDE:Q9FN34
EnsemblPlants:AT5G53920.1 GeneID:835475 KEGG:ath:AT5G53920
TAIR:At5g53920 InParanoid:Q9FN34 OMA:PEKDAVN PhylomeDB:Q9FN34
ProtClustDB:CLSN2686572 Genevestigator:Q9FN34 Uniprot:Q9FN34
Length = 371
Score = 664 (238.8 bits), Expect = 3.2e-65, P = 3.2e-65
Identities = 136/231 (58%), Positives = 164/231 (70%)
Query: 1 MGEQCNWIKKTQQSFHPVEVTKGLWIVPEWGAPPDVQATNIILNPGLAFGSGEHATTKXX 60
MG++ +WI K Q F PVE+ + LWIVPEW +PP +A NIILNPG AFG+GEH TTK
Sbjct: 151 MGDELDWITKNQDLFQPVEIAERLWIVPEWTSPPVAEAVNIILNPGFAFGTGEHPTTKLC 210
Query: 61 XXXXXXXIKGGELFLDYGTGSGILGIAAIKFGAAMSVGADIDPQAIKSAHQNAALNNIGP 120
IKGGE FLDYGTGSGIL IAA+KFGAA SVG DIDP AI SA NAALNNI
Sbjct: 211 LLLLQSLIKGGEAFLDYGTGSGILAIAALKFGAASSVGVDIDPLAINSAIHNAALNNIPL 270
Query: 121 KKMKLHLVPDRTFTASMNERVDGVVEDLSSHKIRGISQTEKYDVVIANILLNPLLQLADH 180
+K++LHL P +E+ SS + + Q E++DVVIANILLNP++ LADH
Sbjct: 271 EKLELHLAP---------------IENSSSGREIPL-QKEQFDVVIANILLNPVMNLADH 314
Query: 181 IVSYAKPGAVVGISGILSEQLPHIINRYSEFLEDILVSEMDDWTCVSGKKK 231
I+S+ KPGA +GISGILSEQLP++ RYS FLEDI V+ + DW C+SG KK
Sbjct: 315 ILSFVKPGATIGISGILSEQLPNVRERYSPFLEDISVATIGDWVCMSGTKK 365
>TIGR_CMR|VC_0293 [details] [associations]
symbol:VC_0293 "ribosomal protein L11 methyltransferase"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0006464
"cellular protein modification process" evidence=ISS] [GO:0008168
"methyltransferase activity" evidence=ISS] [GO:0042254 "ribosome
biogenesis" evidence=ISS] InterPro:IPR004498 InterPro:IPR010456
Pfam:PF06325 PIRSF:PIRSF000401 HAMAP:MF_00735 GO:GO:0005737
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0008276
eggNOG:COG2264 KO:K02687 ProtClustDB:PRK00517 PANTHER:PTHR18895:SF3
TIGRFAMs:TIGR00406 OMA:ASRYNAE PIR:D82341 RefSeq:NP_229948.1
ProteinModelPortal:Q9KV64 DNASU:2614963 GeneID:2614963
KEGG:vch:VC0293 PATRIC:20079633 Uniprot:Q9KV64
Length = 295
Score = 281 (104.0 bits), Expect = 1.2e-24, P = 1.2e-24
Identities = 55/129 (42%), Positives = 80/129 (62%)
Query: 3 EQCNWIKKTQQSFHPVEVTKGLWIVPEWGAPPDVQATNIILNPGLAFGSGEHATTKXXXX 62
E +W ++ +FHP++ + LWI P W PD QA N++L+PGLAFG+G H TT
Sbjct: 92 EDKDWEREWMDNFHPMQFGRRLWICPSWREVPDPQAVNVMLDPGLAFGTGTHPTTALCLE 151
Query: 63 XXXXXIKGGELFLDYGTGSGILGIAAIKFGAAMSVGADIDPQAIKSAHQNAALNNIGPKK 122
G+ +D+G GSGIL IAAIK GAA +G DIDPQA+ ++ NAA N + +
Sbjct: 152 WLDNLDLSGKTVIDFGCGSGILAIAAIKLGAAKVIGIDIDPQALLASKDNAARNGV-EDQ 210
Query: 123 MKLHLVPDR 131
++++L D+
Sbjct: 211 IEVYLPKDQ 219
Score = 129 (50.5 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 34/118 (28%), Positives = 57/118 (48%)
Query: 113 AALNNIGPKKMKLHLVPDRTFTASMNERVDGVVEDLSSHKIRGISQTEKYDVVIANILLN 172
AA+ K + + + P + N +GV + + + + + DVV+ANIL
Sbjct: 176 AAIKLGAAKVIGIDIDPQALLASKDNAARNGVEDQIEVYLPKDQPEGLVADVVVANILAG 235
Query: 173 PLLQLADHIVSYAKPGAVVGISGILSEQLPHIINRYSEFLEDILVSEMDDWTCVSGKK 230
PL +L+ I KPG + +SGIL Q + Y + LE ++E +W +SG+K
Sbjct: 236 PLRELSPIIKGLLKPGGQLAMSGILDTQAESVAEFYRDDLELDPIAEKSEWCRISGRK 293
>UNIPROTKB|P0A8T1 [details] [associations]
symbol:prmA "methyltransferase for 50S ribosomal subunit
protein L11" species:83333 "Escherichia coli K-12" [GO:0016279
"protein-lysine N-methyltransferase activity" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0018023
"peptidyl-lysine trimethylation" evidence=IDA;IMP] [GO:0018012
"N-terminal peptidyl-alanine trimethylation" evidence=IMP]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR004498
InterPro:IPR010456 Pfam:PF06325 PIRSF:PIRSF000401 HAMAP:MF_00735
GO:GO:0005737 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR EMBL:U18997 GO:GO:0016279 EMBL:M95784
EMBL:S67010 GO:GO:0018023 GO:GO:0018012 EMBL:M30953 eggNOG:COG2264
KO:K02687 ProtClustDB:PRK00517 PANTHER:PTHR18895:SF3
TIGRFAMs:TIGR00406 HOGENOM:HOG000007390 PIR:E65118
RefSeq:NP_417725.1 RefSeq:YP_491441.1 ProteinModelPortal:P0A8T1
SMR:P0A8T1 DIP:DIP-47862N IntAct:P0A8T1 MINT:MINT-1232840
PaxDb:P0A8T1 PRIDE:P0A8T1 EnsemblBacteria:EBESCT00000004290
EnsemblBacteria:EBESCT00000014672 GeneID:12932872 GeneID:947708
KEGG:ecj:Y75_p3177 KEGG:eco:b3259 PATRIC:32121948 EchoBASE:EB1460
EcoGene:EG11497 OMA:DNFHPIK BioCyc:EcoCyc:EG11497-MONOMER
BioCyc:ECOL316407:JW3227-MONOMER BioCyc:MetaCyc:EG11497-MONOMER
Genevestigator:P0A8T1 Uniprot:P0A8T1
Length = 293
Score = 280 (103.6 bits), Expect = 1.6e-24, P = 1.6e-24
Identities = 54/129 (41%), Positives = 79/129 (61%)
Query: 3 EQCNWIKKTQQSFHPVEVTKGLWIVPEWGAPPDVQATNIILNPGLAFGSGEHATTKXXXX 62
E +W ++ +FHP+ + LWI P W PD A N++L+PGLAFG+G H TT
Sbjct: 91 EDKDWEREWMDNFHPMRFGERLWICPSWRDVPDENAVNVMLDPGLAFGTGTHPTTSLCLQ 150
Query: 63 XXXXXIKGGELFLDYGTGSGILGIAAIKFGAAMSVGADIDPQAIKSAHQNAALNNIGPKK 122
G+ +D+G GSGIL IAA+K GAA ++G DIDPQAI+++ NA N + +
Sbjct: 151 WLDSLDLTGKTVIDFGCGSGILAIAALKLGAAKAIGIDIDPQAIQASRDNAERNGVSDR- 209
Query: 123 MKLHLVPDR 131
++L+L D+
Sbjct: 210 LELYLPKDQ 218
Score = 131 (51.2 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 37/119 (31%), Positives = 61/119 (51%)
Query: 113 AALNNIGPKKMKLHLVPDRTFTASMNERVDGVVEDLSSHKIRGISQTEKYDVVIANILLN 172
AAL K + + + P + N +GV + L + + + K DVV+ANIL
Sbjct: 175 AALKLGAAKAIGIDIDPQAIQASRDNAERNGVSDRLELYLPKDQPEEMKADVVVANILAG 234
Query: 173 PLLQLADHIVSYAKPGAVVGISGILSEQLPHIINRYSE-FLEDILVSEMDDWTCVSGKK 230
PL +LA I G ++G+SGIL+ Q + Y++ F D +V E ++W ++G+K
Sbjct: 235 PLRELAPLISVLPVSGGLLGLSGILASQAESVCEAYADSFALDPVV-EKEEWCRITGRK 292
>TIGR_CMR|SO_0395 [details] [associations]
symbol:SO_0395 "ribosomal protein L11 methyltransferase"
species:211586 "Shewanella oneidensis MR-1" [GO:0006412
"translation" evidence=ISS] [GO:0006464 "cellular protein
modification process" evidence=ISS] [GO:0008168 "methyltransferase
activity" evidence=ISS] InterPro:IPR004498 InterPro:IPR010456
Pfam:PF06325 PIRSF:PIRSF000401 HAMAP:MF_00735 GO:GO:0005737
EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0008276
eggNOG:COG2264 KO:K02687 ProtClustDB:PRK00517 PANTHER:PTHR18895:SF3
TIGRFAMs:TIGR00406 HOGENOM:HOG000007390 OMA:DNFHPIK
RefSeq:NP_716033.1 ProteinModelPortal:Q8EJR7 GeneID:1168272
KEGG:son:SO_0395 PATRIC:23520493 Uniprot:Q8EJR7
Length = 293
Score = 265 (98.3 bits), Expect = 6.1e-23, P = 6.1e-23
Identities = 52/129 (40%), Positives = 76/129 (58%)
Query: 3 EQCNWIKKTQQSFHPVEVTKGLWIVPEWGAPPDVQATNIILNPGLAFGSGEHATTKXXXX 62
E +W+++ ++HP++ K LWI P W PD A N+IL+PGLAFG+G H TT
Sbjct: 91 EDKDWVREWMDNYHPIQFGKRLWICPSWREVPDPTAVNVILDPGLAFGTGTHPTTALCLE 150
Query: 63 XXXXXIKGGELFLDYGTGSGILGIAAIKFGAAMSVGADIDPQAIKSAHQNAALNNIGPKK 122
E +D+G GSGIL +AA+K GA G DID QAI ++ NA N++ +
Sbjct: 151 WLDSLDLSNEEVIDFGCGSGILAVAALKLGAKKVTGIDIDYQAIDASKANAERNDVADQ- 209
Query: 123 MKLHLVPDR 131
++L+L D+
Sbjct: 210 LELYLPEDQ 218
Score = 127 (49.8 bits), Expect = 5.1e-06, P = 5.1e-06
Identities = 37/120 (30%), Positives = 60/120 (50%)
Query: 113 AALNNIGPKKMKLHLVPDRTFTASM-NERVDGVVEDLSSHKIRGISQTEKYDVVIANILL 171
AAL +G KK+ + + AS N + V + L + K DV++ANIL
Sbjct: 175 AALK-LGAKKVTGIDIDYQAIDASKANAERNDVADQLELYLPEDQPADLKADVLVANILA 233
Query: 172 NPLLQLADHIVSYAKPGAVVGISGILSEQLPHIINRYSEFLEDILVSEMDDWTCVSGKKK 231
PL +LA I K G + +SG+L EQ I + YS++ + + +DW+ ++G +K
Sbjct: 234 GPLRELAPLIAERVKTGGKLALSGLLKEQAQEISDFYSQWFDMDEAAHKEDWSRLTGTRK 293
>TIGR_CMR|CPS_0540 [details] [associations]
symbol:CPS_0540 "ribosomal protein L11 methyltransferase"
species:167879 "Colwellia psychrerythraea 34H" [GO:0006464
"cellular protein modification process" evidence=ISS] [GO:0008757
"S-adenosylmethionine-dependent methyltransferase activity"
evidence=ISS] InterPro:IPR004498 InterPro:IPR010456 Pfam:PF06325
PIRSF:PIRSF000401 HAMAP:MF_00735 GO:GO:0005737 EMBL:CP000083
GenomeReviews:CP000083_GR GO:GO:0008276 eggNOG:COG2264 KO:K02687
ProtClustDB:PRK00517 PANTHER:PTHR18895:SF3 TIGRFAMs:TIGR00406
RefSeq:YP_267298.1 ProteinModelPortal:Q489G6 STRING:Q489G6
GeneID:3523049 KEGG:cps:CPS_0540 PATRIC:21464421
HOGENOM:HOG000007390 OMA:ASRYNAE BioCyc:CPSY167879:GI48-635-MONOMER
Uniprot:Q489G6
Length = 293
Score = 263 (97.6 bits), Expect = 1.0e-22, P = 1.0e-22
Identities = 50/129 (38%), Positives = 79/129 (61%)
Query: 3 EQCNWIKKTQQSFHPVEVTKGLWIVPEWGAPPDVQATNIILNPGLAFGSGEHATTKXXXX 62
E +W ++ +FHP++ + LW+ P W PD +A N++L+PGLAFG+G H TT
Sbjct: 92 EDKDWEREWMDNFHPMKFGERLWVCPSWRDVPDPEAVNVMLDPGLAFGTGTHPTTALCLT 151
Query: 63 XXXXXIKGGELFLDYGTGSGILGIAAIKFGAAMSVGADIDPQAIKSAHQNAALNNIGPKK 122
+ +D+G GSGIL +AA+K GA +G DIDPQA++++ NA NN+ +
Sbjct: 152 WLDGLDLQDKTVVDFGCGSGILSLAALKLGAKKVIGIDIDPQALQASLANAERNNVSDR- 210
Query: 123 MKLHLVPDR 131
++L+L D+
Sbjct: 211 LELYLPKDQ 219
Score = 125 (49.1 bits), Expect = 9.0e-06, P = 9.0e-06
Identities = 37/121 (30%), Positives = 63/121 (52%)
Query: 113 AALNNIGPKKM-KLHLVPDRTFTASMNERVDGVVEDLSSHKIRGISQTE-KYDVVIANIL 170
AAL +G KK+ + + P + N + V + L + + Q E K DVV+ANIL
Sbjct: 176 AALK-LGAKKVIGIDIDPQALQASLANAERNNVSDRLELYLPK--DQPEFKADVVVANIL 232
Query: 171 LNPLLQLADHIVSYAKPGAVVGISGILSEQLPHIINRYSEFLEDILVSEMDDWTCVSGKK 230
PL +LA I+ Y ++ +SG+L EQ + Y ++ + VS ++W ++G++
Sbjct: 233 AGPLRELAPVIIEYVGDKGLLALSGVLEEQAQTLQTIYGQWCDMEPVSVQEEWVRLNGQR 292
Query: 231 K 231
K
Sbjct: 293 K 293
>TIGR_CMR|BA_4537 [details] [associations]
symbol:BA_4537 "ribosomal protein L11 methyltransferase"
species:198094 "Bacillus anthracis str. Ames" [GO:0006464 "cellular
protein modification process" evidence=ISS] [GO:0008168
"methyltransferase activity" evidence=ISS] InterPro:IPR004498
InterPro:IPR010456 Pfam:PF06325 PIRSF:PIRSF000401 HAMAP:MF_00735
GO:GO:0005737 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0008276 RefSeq:NP_846760.1
RefSeq:YP_021183.1 RefSeq:YP_030459.1 ProteinModelPortal:Q81LS4
DNASU:1088267 EnsemblBacteria:EBBACT00000012000
EnsemblBacteria:EBBACT00000014175 EnsemblBacteria:EBBACT00000020446
GeneID:1088267 GeneID:2819007 GeneID:2848691 KEGG:ban:BA_4537
KEGG:bar:GBAA_4537 KEGG:bat:BAS4211 eggNOG:COG2264
HOGENOM:HOG000007391 KO:K02687 OMA:EVNEEEW ProtClustDB:PRK00517
BioCyc:BANT260799:GJAJ-4267-MONOMER
BioCyc:BANT261594:GJ7F-4413-MONOMER PANTHER:PTHR18895:SF3
TIGRFAMs:TIGR00406 Uniprot:Q81LS4
Length = 312
Score = 214 (80.4 bits), Expect = 1.6e-17, P = 1.6e-17
Identities = 43/113 (38%), Positives = 63/113 (55%)
Query: 6 NWIKKTQQSFHPVEVTKGLWIVPEWG--APPDVQATNIILNPGLAFGSGEHATTKXXXXX 63
+W ++ +HPV+++ IVP W P + I L+PG+AFG+G H TT
Sbjct: 109 DWATAWKKYYHPVQISDTFTIVPTWEEYTPSSPEEKIIELDPGMAFGTGTHPTTTMCIRA 168
Query: 64 XXXXIKGGELFLDYGTGSGILGIAAIKFGAAMSVGADIDPQAIKSAHQNAALN 116
++ G+ +D GTGSG+L IAA K GA+ D+DP A++SA N LN
Sbjct: 169 LEKTVQPGDTIIDVGTGSGVLSIAAAKLGASSVQAYDLDPVAVESAEMNVRLN 221
>TIGR_CMR|CJE_1260 [details] [associations]
symbol:CJE_1260 "ribosomal protein L11 methyltransferase,
putative" species:195099 "Campylobacter jejuni RM1221" [GO:0006464
"cellular protein modification process" evidence=ISS] [GO:0008757
"S-adenosylmethionine-dependent methyltransferase activity"
evidence=ISS] InterPro:IPR004498 InterPro:IPR010456 Pfam:PF06325
PIRSF:PIRSF000401 HAMAP:MF_00735 GO:GO:0005737 EMBL:CP000025
GenomeReviews:CP000025_GR GO:GO:0008276 HSSP:Q84BQ9 eggNOG:COG2264
HOGENOM:HOG000007391 KO:K02687 ProtClustDB:PRK00517
PANTHER:PTHR18895:SF3 RefSeq:YP_179248.1 ProteinModelPortal:Q5HTY7
STRING:Q5HTY7 GeneID:3231767 KEGG:cjr:CJE1260 PATRIC:20044316
OMA:FSWALEI BioCyc:CJEJ195099:GJC0-1286-MONOMER Uniprot:Q5HTY7
Length = 281
Score = 161 (61.7 bits), Expect = 1.3e-16, Sum P(2) = 1.3e-16
Identities = 42/116 (36%), Positives = 57/116 (49%)
Query: 3 EQCNWIKKTQQSFHPVEVTKGLWIVPEWGAPPDVQATNIILNPGLAFGSGEHATTKXXXX 62
E +WI++ ++ P+ V ++I W NI +NP LAFGSG H +T
Sbjct: 81 ENKDWIQEYKKGIKPILVDN-VYIHTTWQEEKK-NCINIKINPALAFGSGHHESTYSCVK 138
Query: 63 XXXXXIKGGELFLDYGTGSGILGIAAIKFGAAMSVGADIDPQAIKSAHQNAALNNI 118
K LD G GSGILGI KFG + + D D AI S+ +NA LN +
Sbjct: 139 FLQKFSKSKLRALDLGCGSGILGIIMAKFGCNVEI-CDTDELAIDSSLENARLNGV 193
Score = 81 (33.6 bits), Expect = 1.3e-16, Sum P(2) = 1.3e-16
Identities = 24/96 (25%), Positives = 50/96 (52%)
Query: 138 NERVDGVVEDLSSHKIRGISQTEK-YDVVIANILLNPLLQLADHIVSYAKPGAVVGISGI 196
N R++GV D I + Y++++ANI+ + +L L I ++ + A++ +SGI
Sbjct: 187 NARLNGV--DFHKAWCGSIDKANGLYNLIVANIIADVILILEKDIKNHLEDNAILILSGI 244
Query: 197 LSEQLPHIINRYS--EFLEDILVSEMDDWTCVSGKK 230
L + I ++ E +++I ++E + + KK
Sbjct: 245 LDKYSTRIKEKFQDLELIDEIQINEWCSFVYKNNKK 280
>TIGR_CMR|GSU_0447 [details] [associations]
symbol:GSU_0447 "ribosomal protein L11 methyltransferase"
species:243231 "Geobacter sulfurreducens PCA" [GO:0006464 "cellular
protein modification process" evidence=ISS] [GO:0008757
"S-adenosylmethionine-dependent methyltransferase activity"
evidence=ISS] [GO:0042254 "ribosome biogenesis" evidence=ISS]
InterPro:IPR004498 InterPro:IPR010456 Pfam:PF06325
PIRSF:PIRSF000401 HAMAP:MF_00735 GO:GO:0005737 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0008276 eggNOG:COG2264
HOGENOM:HOG000007391 KO:K02687 PANTHER:PTHR18895:SF3
TIGRFAMs:TIGR00406 RefSeq:NP_951506.1 ProteinModelPortal:Q74G05
GeneID:2686328 KEGG:gsu:GSU0447 PATRIC:22023640 OMA:ITIPIAR
ProtClustDB:CLSK827836 BioCyc:GSUL243231:GH27-438-MONOMER
Uniprot:Q74G05
Length = 299
Score = 202 (76.2 bits), Expect = 2.9e-16, P = 2.9e-16
Identities = 49/129 (37%), Positives = 69/129 (53%)
Query: 6 NWIKKTQQSFHPVEVTKGLWIVPEWGA-PPDVQATNIILNPGLAFGSGEHATTKXXXXXX 64
+W +Q F P + + L I P W P+ I L+PG+AFG+G H TT+
Sbjct: 100 DWATGWRQHFVPTRIGRHLVIKPTWEPFAPEPGDQVIELDPGMAFGTGTHPTTRLCLEAL 159
Query: 65 XXXIKGGELFLDYGTGSGILGIAAIKFGAAMSVGADIDPQAIKSAHQNAALNNIGPKKMK 124
+ + LD GTGSGIL IAA++ GA +G DIDP A+ A +N ALN + + +
Sbjct: 160 ETLGRPDRV-LDVGTGSGILAIAAVRLGARQVIGTDIDPDAVIVAGENCALNGVEVELVT 218
Query: 125 --LHLVPDR 131
L L+P R
Sbjct: 219 TPLALIPGR 227
>TIGR_CMR|CHY_0417 [details] [associations]
symbol:CHY_0417 "ribosomal protein L11 methyltransferase"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0006464 "cellular protein modification process" evidence=ISS]
[GO:0008757 "S-adenosylmethionine-dependent methyltransferase
activity" evidence=ISS] InterPro:IPR004498 InterPro:IPR010456
Pfam:PF06325 PIRSF:PIRSF000401 HAMAP:MF_00735 GO:GO:0005737
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0008276 HSSP:O60678
eggNOG:COG2264 HOGENOM:HOG000007391 KO:K02687 PANTHER:PTHR18895:SF3
TIGRFAMs:TIGR00406 RefSeq:YP_359278.1 ProteinModelPortal:Q3AF06
STRING:Q3AF06 GeneID:3727819 KEGG:chy:CHY_0417 PATRIC:21273995
OMA:EMRIRIE BioCyc:CHYD246194:GJCN-418-MONOMER Uniprot:Q3AF06
Length = 305
Score = 200 (75.5 bits), Expect = 4.7e-16, P = 4.7e-16
Identities = 49/154 (31%), Positives = 82/154 (53%)
Query: 6 NWIKKTQQSFHPVEVTKGLWIVPEWGA-PPDVQATNII-LNPGLAFGSGEHATTKXXXXX 63
+W ++ F PVEV + L I P W P + II ++PG+AFG+G H TT
Sbjct: 103 SWANSWKKYFKPVEVGEFL-IKPTWEKLPSGKEDKKIIEIDPGMAFGTGTHVTTALVLEA 161
Query: 64 XXXXIKGGELFLDYGTGSGILGIAAIKFGAAMSVGADIDPQAIKSAHQNAALNNIGPKKM 123
+ G++ +D GTGSGIL IA+ GA DIDP A+K A +N ++N + +
Sbjct: 162 LPKYVSPGKVVVDVGTGSGILAIASALLGAEKIYALDIDPVAVKVARENISINRL---ED 218
Query: 124 KLHLVPDRTFTASMNERVDGVVEDLSSHKIRGIS 157
K+ ++ + N+ VD ++ ++ + I+ ++
Sbjct: 219 KITVI-ENDLLHGFNQTVDVIIANIIAAVIKELA 251
>TIGR_CMR|GSU_3320 [details] [associations]
symbol:GSU_3320 "ribosomal protein L11 methyltransferase,
putative" species:243231 "Geobacter sulfurreducens PCA" [GO:0006464
"cellular protein modification process" evidence=ISS] [GO:0008168
"methyltransferase activity" evidence=ISS] [GO:0042254 "ribosome
biogenesis" evidence=ISS] InterPro:IPR004498 InterPro:IPR010456
Pfam:PF06325 GO:GO:0005737 EMBL:AE017180 GenomeReviews:AE017180_GR
GO:GO:0008276 PANTHER:PTHR18895:SF3 RefSeq:NP_954360.1
ProteinModelPortal:Q747E7 GeneID:2686457 KEGG:gsu:GSU3320
PATRIC:22029491 HOGENOM:HOG000003422 OMA:ANIYADI
ProtClustDB:CLSK924677 BioCyc:GSUL243231:GH27-3343-MONOMER
Uniprot:Q747E7
Length = 198
Score = 158 (60.7 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 45/109 (41%), Positives = 55/109 (50%)
Query: 15 FHPVEVTKGLWIVPEWGAPPDVQATNIILNPGLAFGSGEHATTKXXXXXXXXXIKG--GE 72
F P V G IVPE P + +I+ AFGSGEH TT I G G
Sbjct: 6 FTPFTVG-GFIIVPEDAPLPLGEHIPLIMGKKGAFGSGEHETT-ASCLEELERIPGLTGM 63
Query: 73 LFLDYGTGSGILGIAAIKFGAAMSVGADIDPQAIKSAHQNAALNNIGPK 121
LD G+G+GIL IAA++ GAA V DIDP+A S N LN + +
Sbjct: 64 RGLDLGSGTGILAIAAVRLGAASVVAVDIDPKAAASCAANVRLNGVADR 112
>TIGR_CMR|SPO_3120 [details] [associations]
symbol:SPO_3120 "ribosomal protein L11 methyltransferase,
putative" species:246200 "Ruegeria pomeroyi DSS-3" [GO:0006464
"cellular protein modification process" evidence=ISS] [GO:0008757
"S-adenosylmethionine-dependent methyltransferase activity"
evidence=ISS] InterPro:IPR004498 InterPro:IPR010456 Pfam:PF06325
PIRSF:PIRSF000401 HAMAP:MF_00735 GO:GO:0005737 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0008276 HOGENOM:HOG000007391
KO:K02687 PANTHER:PTHR18895:SF3 RefSeq:YP_168323.1
ProteinModelPortal:Q5LNT3 GeneID:3195458 KEGG:sil:SPO3120
PATRIC:23379685 OMA:YGSHDAD ProtClustDB:CLSK934068 Uniprot:Q5LNT3
Length = 292
Score = 114 (45.2 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 25/70 (35%), Positives = 42/70 (60%)
Query: 162 YDVVIANILLNPLLQLADHIVSYAKPGAVVGISGILSEQLPHIINRYSEFLEDILV-SEM 220
YD++ ANIL PL+ LA + S+ +PG +SGIL+EQ +I Y++ +++ +
Sbjct: 219 YDLIFANILKGPLVALAPDVASHLRPGGYAILSGILNEQADDVIAVYAQAGTNLVDRGVI 278
Query: 221 DDWTCVSGKK 230
DWT + +K
Sbjct: 279 GDWTTLLLRK 288
Score = 93 (37.8 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 28/120 (23%), Positives = 53/120 (44%)
Query: 4 QCNWIKKTQQSFHPVEVTKGLWIVPEWGAP--PDVQATNIILNPGLAFGSGEHATTKXXX 61
+ +W+ ++ PVE + ++ A P+ + +++ +AFG+G H TT
Sbjct: 79 ETDWVAHVKRELSPVEAGR-FFVYGSHDADKVPEGRIP-LLIEASMAFGTGHHGTTLGCL 136
Query: 62 XXXXXXIKGG---ELFLDYGTGSGILGIAAIKFGAAMSVGADIDPQAIKSAHQNAALNNI 118
I+ G D G G+ +L +AA + + +DID A++ A N N +
Sbjct: 137 RALDGLIELGFSAAKVADIGCGTAVLAMAAARVWQGDFLASDIDAVAVEVAEANLKANGM 196
>UNIPROTKB|Q889R2 [details] [associations]
symbol:PSPTO_0687 "Conserved domain protein" species:223283
"Pseudomonas syringae pv. tomato str. DC3000" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR010456 Pfam:PF06325
GO:GO:0005737 EMBL:AE016853 GenomeReviews:AE016853_GR GO:GO:0008276
HSSP:Q84BQ9 eggNOG:COG3897 HOGENOM:HOG000226047 RefSeq:NP_790534.1
ProteinModelPortal:Q889R2 GeneID:1182307 KEGG:pst:PSPTO_0687
PATRIC:19992555 OMA:PPYWSFC ProtClustDB:CLSK912612
BioCyc:PSYR223283:GJIX-694-MONOMER Uniprot:Q889R2
Length = 217
Score = 116 (45.9 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 22/48 (45%), Positives = 31/48 (64%)
Query: 71 GELFLDYGTGSGILGIAAIKFGAAMSVGADIDPQAIKSAHQNAALNNI 118
G+ LD+G GSG+ GIAA++ GA V D+DP A+ + NA LN +
Sbjct: 82 GKRVLDFGAGSGVAGIAALRAGALEVVACDLDPLALAACRANAELNQV 129
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.135 0.402 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 237 228 0.00081 113 3 11 22 0.43 33
32 0.41 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 12
No. of states in DFA: 605 (64 KB)
Total size of DFA: 181 KB (2104 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 18.95u 0.10s 19.05t Elapsed: 00:00:01
Total cpu time: 18.95u 0.11s 19.06t Elapsed: 00:00:01
Start: Fri May 10 17:12:01 2013 End: Fri May 10 17:12:02 2013