BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>026514
MATVTESSEDEKPNVAAASDTVFKSQSLEDGNPWIDNAVQQVMIYRKIVEESIDSAIEAS
RSRLSQTRLTASVHFQQTLDYLQDVKSEYAAYEDAAVGKVKEGIHVAASHPFITAGGAIG
LGSFLLKRPRHFLYYNTLRLFASEESLLSRADTKVKQLRQSIDRLKAESEKLEKVALVAE
DELIRGRTKLRQAGKQIQGVINSAYKIERQAAGLKDIVGELPRREASRFRSQVSFLY

High Scoring Gene Products

Symbol, full name Information P value
AT2G45060 protein from Arabidopsis thaliana 1.7e-66
AT4G26410 protein from Arabidopsis thaliana 4.2e-24

Back to top

Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  026514
        (237 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2055578 - symbol:AT2G45060 "AT2G45060" species...   676  1.7e-66   1
TAIR|locus:2131473 - symbol:AT4G26410 "AT4G26410" species...   276  4.2e-24   1


>TAIR|locus:2055578 [details] [associations]
            symbol:AT2G45060 "AT2G45060" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0006007
            "glucose catabolic process" evidence=RCA] GO:GO:0005739
            EMBL:CP002685 GenomeReviews:CT485783_GR InterPro:IPR016803
            PIRSF:PIRSF022280 EMBL:AY045585 EMBL:AY085438 EMBL:AY143908
            IPI:IPI00521606 RefSeq:NP_566034.1 UniGene:At.26163 PaxDb:Q94AZ5
            PRIDE:Q94AZ5 EnsemblPlants:AT2G45060.1 GeneID:819113
            KEGG:ath:AT2G45060 TAIR:At2g45060 eggNOG:NOG318876
            HOGENOM:HOG000005752 InParanoid:Q94AZ5 OMA:ISNYGIS PhylomeDB:Q94AZ5
            ProtClustDB:CLSN2688937 Genevestigator:Q94AZ5 Uniprot:Q94AZ5
        Length = 272

 Score = 676 (243.0 bits), Expect = 1.7e-66, P = 1.7e-66
 Identities = 129/208 (62%), Positives = 170/208 (81%)

Query:    27 SLEDGNPWIDNAVQQVMIYRKIVEESIDSAIEASRSRLSQTRLTASVHFQQTLDYLQDVK 86
             ++E+   WID+A++Q ++Y+K + E++DS I+AS++RLSQ R T+  H  QT+D L+D+ 
Sbjct:    38 TVENAASWIDDALRQALVYQKTITETVDSTIDASKARLSQIRDTSVAHTSQTIDSLRDIA 97

Query:    87 SEYAAYEDAAVGKVKEGIHVAASHPFITAGGAIGLGSFLLKRPRHFLYYNTLRLFASEES 146
             SEY  YE    GK+K+G++VAASHP I+   A G+G F LK+ R F+YYNT+R+F SEE+
Sbjct:    98 SEYNVYEQMVFGKIKDGVNVAASHPLISGTLAFGVGIFALKKTRRFVYYNTVRMFVSEEA 157

Query:   147 LLSRADTKVKQLRQSIDRLKAESEKLEKVALVAEDELIRGRTKLRQAGKQIQGVINSAYK 206
             LLSRAD KVK+LRQS+DRLKAESEKLE+VA VAE+E IRGR KLRQAGKQI+G I+SAYK
Sbjct:   158 LLSRADLKVKELRQSMDRLKAESEKLERVATVAEEEFIRGRMKLRQAGKQIRGAISSAYK 217

Query:   207 IERQAAGLKDIVGELPRREASRFRSQVS 234
             IE+QAAGLKD++ ELP REASRFR+Q+S
Sbjct:   218 IEKQAAGLKDVLKELPTREASRFRTQIS 245


>TAIR|locus:2131473 [details] [associations]
            symbol:AT4G26410 "AT4G26410" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] [GO:0005739 "mitochondrion" evidence=IDA]
            GO:GO:0005739 EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:BT002964
            EMBL:BT004440 IPI:IPI00521531 RefSeq:NP_194371.2 UniGene:At.46172
            PRIDE:Q84K90 EnsemblPlants:AT4G26410.1 GeneID:828747
            KEGG:ath:AT4G26410 TAIR:At4g26410 InParanoid:Q84K90 OMA:PRRFLFR
            PhylomeDB:Q84K90 ProtClustDB:CLSN2680097 Genevestigator:Q84K90
            InterPro:IPR016803 PIRSF:PIRSF022280 Uniprot:Q84K90
        Length = 263

 Score = 276 (102.2 bits), Expect = 4.2e-24, P = 4.2e-24
 Identities = 67/201 (33%), Positives = 114/201 (56%)

Query:    35 IDNAVQQVMIYRKIVEESIDSAIEASRSRLSQTRLTASVHFQQTLDYLQDVKSEYAAYED 94
             I+ A + V   ++ V+ES D+A+ ++RS     R  ++  F+   D++    ++Y  YE+
Sbjct:    41 IEGAEKWVGDLQRTVKESKDTAMRSARS----LRENSTSQFRSIQDFIPHALTQYKTYEN 96

Query:    95 AAVGKVKEGIHVAASHPFITAGGAIGLGSFLLKRPRHFLYYNTLRLFASEESLLSRADTK 154
             A   KV + +  A  HP    G  +     L++ PR FL+ NTL  F SEE+   +A+  
Sbjct:    97 AFFSKVTDELIYAKEHPAAAIGIGVAASLVLMRGPRRFLFRNTLGRFQSEEAQFLKAEKH 156

Query:   155 VKQLRQSIDRLKAESEKL-EKVALVAEDELIRGRTKLRQAGKQIQGVINSAYKIERQAAG 213
             V++L  S+D +K ES KL E+ AL AE ++ RG ++L  +G  I  +  S +K E +AA 
Sbjct:   157 VQELNMSVDLMKKESRKLLERTAL-AEKDMKRGLSELMNSGNDIHRLAKSVHKAECEAAD 215

Query:   214 LKDIVGELPRREASRFRSQVS 234
             L D + ++P R+A + R++V+
Sbjct:   216 LMDGLRQIPGRDAIKLRAEVA 236


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.315   0.129   0.343    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      237       237   0.00090  113 3  10 23  0.44    33
                                                     32  0.43    36


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  591 (63 KB)
  Total size of DFA:  200 KB (2114 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  35.51u 0.19s 35.70t   Elapsed:  00:00:01
  Total cpu time:  35.51u 0.19s 35.70t   Elapsed:  00:00:01
  Start:  Fri May 10 17:12:43 2013   End:  Fri May 10 17:12:44 2013

Back to top