Query 026519
Match_columns 237
No_of_seqs 125 out of 1312
Neff 10.0
Searched_HMMs 46136
Date Fri Mar 29 09:05:24 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026519.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/026519hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PRK10146 aminoalkylphosphonic 99.8 5.2E-19 1.1E-23 129.2 10.7 136 22-206 2-137 (144)
2 TIGR02382 wecD_rffC TDP-D-fuco 99.8 6E-18 1.3E-22 129.6 14.9 144 20-207 40-185 (191)
3 TIGR03827 GNAT_ablB putative b 99.8 4.6E-18 9.9E-23 136.6 14.8 155 20-231 112-266 (266)
4 COG1247 Sortase and related ac 99.8 2.7E-17 5.7E-22 120.8 14.0 163 24-235 2-168 (169)
5 PRK09491 rimI ribosomal-protei 99.8 2.1E-17 4.5E-22 121.1 13.3 97 113-230 49-145 (146)
6 PTZ00330 acetyltransferase; Pr 99.7 8.5E-17 1.8E-21 117.9 14.5 139 20-207 3-141 (147)
7 PRK10975 TDP-fucosamine acetyl 99.7 9.4E-17 2E-21 123.3 15.2 142 23-208 46-189 (194)
8 PRK10140 putative acetyltransf 99.7 9.4E-17 2E-21 119.5 14.8 94 113-220 60-154 (162)
9 TIGR02406 ectoine_EctA L-2,4-d 99.7 5E-17 1.1E-21 120.5 12.4 92 113-219 49-140 (157)
10 PRK03624 putative acetyltransf 99.7 1E-16 2.2E-21 116.1 13.6 129 23-207 2-130 (140)
11 PRK10809 ribosomal-protein-S5- 99.7 3.9E-16 8.4E-21 119.8 15.2 93 113-220 86-179 (194)
12 PLN02825 amino-acid N-acetyltr 99.7 7.8E-17 1.7E-21 138.3 11.5 162 5-232 354-515 (515)
13 PF13420 Acetyltransf_4: Acety 99.7 4.3E-17 9.4E-22 120.5 8.4 147 26-219 1-151 (155)
14 PF13523 Acetyltransf_8: Acety 99.7 6.4E-16 1.4E-20 114.0 12.3 141 26-209 1-143 (152)
15 PLN02706 glucosamine 6-phospha 99.7 1.5E-15 3.3E-20 111.7 14.0 81 113-207 64-144 (150)
16 PRK10151 ribosomal-protein-L7/ 99.7 1.4E-15 3.1E-20 115.2 13.6 161 21-230 8-175 (179)
17 KOG3216 Diamine acetyltransfer 99.7 2.6E-15 5.7E-20 105.9 12.5 83 113-207 64-146 (163)
18 KOG3235 Subunit of the major N 99.7 3.5E-16 7.5E-21 110.8 7.8 151 24-232 2-154 (193)
19 PRK07922 N-acetylglutamate syn 99.7 3.3E-15 7.1E-20 112.0 13.1 124 21-207 3-127 (169)
20 PHA00673 acetyltransferase dom 99.7 4.9E-15 1.1E-19 107.3 13.3 135 27-207 10-146 (154)
21 KOG3139 N-acetyltransferase [G 99.7 1.5E-15 3.3E-20 108.4 10.4 86 115-214 68-153 (165)
22 COG0456 RimI Acetyltransferase 99.6 2.1E-15 4.5E-20 113.9 11.5 145 21-211 9-158 (177)
23 PRK10514 putative acetyltransf 99.6 6.7E-15 1.5E-19 107.6 13.1 72 113-211 59-130 (145)
24 PF00583 Acetyltransf_1: Acety 99.6 1.7E-15 3.7E-20 99.9 9.0 80 112-203 4-83 (83)
25 PRK15130 spermidine N1-acetylt 99.6 2.1E-15 4.5E-20 115.0 10.3 102 113-230 66-168 (186)
26 PRK07757 acetyltransferase; Pr 99.6 8.2E-15 1.8E-19 108.0 12.5 124 23-209 1-124 (152)
27 PF13527 Acetyltransf_9: Acety 99.6 7.4E-15 1.6E-19 104.9 10.7 127 25-205 1-127 (127)
28 TIGR01575 rimI ribosomal-prote 99.6 2.2E-14 4.7E-19 102.7 13.1 81 113-211 40-120 (131)
29 TIGR03103 trio_acet_GNAT GNAT- 99.6 1.9E-14 4.2E-19 126.0 14.7 136 22-207 81-217 (547)
30 PRK09831 putative acyltransfer 99.6 1.1E-14 2.3E-19 106.8 10.0 127 24-209 1-128 (147)
31 PRK05279 N-acetylglutamate syn 99.6 9.2E-15 2E-19 125.6 11.0 99 113-231 343-441 (441)
32 TIGR01890 N-Ac-Glu-synth amino 99.6 9.6E-15 2.1E-19 124.9 11.1 147 24-231 283-429 (429)
33 COG1246 ArgA N-acetylglutamate 99.6 5E-14 1.1E-18 100.7 11.8 123 25-208 2-124 (153)
34 PF13302 Acetyltransf_3: Acety 99.6 1.5E-13 3.2E-18 99.8 14.4 137 23-203 1-142 (142)
35 PRK10562 putative acetyltransf 99.6 1.3E-13 2.8E-18 100.9 13.8 70 113-208 57-126 (145)
36 TIGR03585 PseH pseudaminic aci 99.6 3.1E-14 6.6E-19 105.3 9.9 91 113-220 60-151 (156)
37 PF13673 Acetyltransf_10: Acet 99.6 5.2E-14 1.1E-18 98.9 10.3 65 113-202 53-117 (117)
38 TIGR01686 FkbH FkbH-like domai 99.5 1.4E-13 3E-18 113.5 12.6 134 19-205 182-319 (320)
39 TIGR03448 mycothiol_MshD mycot 99.5 5E-13 1.1E-17 109.0 15.1 62 146-207 227-288 (292)
40 PRK12308 bifunctional arginino 99.5 1.1E-13 2.5E-18 123.1 11.9 125 22-209 462-586 (614)
41 PRK10314 putative acyltransfer 99.5 1.2E-13 2.5E-18 101.9 9.9 94 113-232 57-151 (153)
42 PHA01807 hypothetical protein 99.5 2.4E-13 5.2E-18 99.6 11.4 80 113-207 62-141 (153)
43 KOG3396 Glucosamine-phosphate 99.5 6.7E-13 1.4E-17 91.8 10.6 82 112-207 63-144 (150)
44 KOG3138 Predicted N-acetyltran 99.5 3.7E-13 8E-18 100.3 9.4 73 145-217 89-162 (187)
45 PF13508 Acetyltransf_7: Acety 99.5 7.6E-13 1.6E-17 86.5 9.8 68 113-204 12-79 (79)
46 PRK01346 hypothetical protein; 99.4 2.4E-12 5.1E-17 110.0 13.7 134 20-207 3-136 (411)
47 PRK13688 hypothetical protein; 99.4 2.2E-12 4.7E-17 95.0 9.7 59 142-208 76-134 (156)
48 TIGR03448 mycothiol_MshD mycot 99.4 3.3E-12 7.3E-17 104.1 11.3 74 113-207 55-128 (292)
49 COG3153 Predicted acetyltransf 99.4 2.8E-11 6.1E-16 89.3 14.4 151 22-233 2-152 (171)
50 PF08445 FR47: FR47-like prote 99.4 4.4E-12 9.5E-17 84.0 8.9 61 146-207 22-82 (86)
51 KOG3234 Acetyltransferase, (GN 99.3 7.5E-12 1.6E-16 88.9 8.2 84 145-232 69-152 (173)
52 COG1670 RimL Acetyltransferase 99.3 2.6E-11 5.6E-16 91.8 11.7 98 113-224 77-175 (187)
53 cd02169 Citrate_lyase_ligase C 99.3 1.4E-11 3E-16 99.7 10.4 73 113-210 15-87 (297)
54 COG3981 Predicted acetyltransf 99.2 2.9E-10 6.2E-15 82.5 11.9 85 113-210 78-162 (174)
55 COG3393 Predicted acetyltransf 99.2 3.8E-10 8.3E-15 87.5 12.2 77 113-207 186-262 (268)
56 KOG2488 Acetyltransferase (GNA 99.2 9.9E-11 2.1E-15 86.0 8.2 84 113-210 102-185 (202)
57 TIGR00124 cit_ly_ligase [citra 99.1 5.2E-10 1.1E-14 92.0 10.9 73 113-210 40-112 (332)
58 KOG3397 Acetyltransferases [Ge 99.1 7.8E-10 1.7E-14 80.0 10.1 78 113-209 66-143 (225)
59 KOG4144 Arylalkylamine N-acety 99.1 3.5E-11 7.6E-16 85.1 3.1 178 18-232 6-184 (190)
60 COG3818 Predicted acetyltransf 99.0 8.9E-09 1.9E-13 71.0 9.4 68 142-209 81-150 (167)
61 TIGR01211 ELP3 histone acetylt 98.9 6.2E-09 1.3E-13 90.4 9.9 85 110-206 420-515 (522)
62 COG2153 ElaA Predicted acyltra 98.9 1.1E-08 2.4E-13 72.1 8.2 95 112-232 58-153 (155)
63 PF13718 GNAT_acetyltr_2: GNAT 98.7 6.5E-08 1.4E-12 73.1 8.8 85 142-232 87-196 (196)
64 PF08444 Gly_acyl_tr_C: Aralky 98.7 5E-08 1.1E-12 63.6 6.1 61 145-206 19-79 (89)
65 PF12746 GNAT_acetyltran: GNAT 98.6 4.7E-07 1E-11 72.0 10.9 61 143-207 187-247 (265)
66 PF14542 Acetyltransf_CG: GCN5 98.6 5.6E-07 1.2E-11 58.2 8.6 66 112-200 7-72 (78)
67 cd04301 NAT_SF N-Acyltransfera 98.5 5.3E-07 1.1E-11 55.0 7.4 58 112-184 7-64 (65)
68 COG1444 Predicted P-loop ATPas 98.5 7.1E-07 1.5E-11 79.8 9.5 85 143-234 529-613 (758)
69 KOG4135 Predicted phosphogluco 98.2 5.2E-06 1.1E-10 58.9 7.1 63 145-207 107-170 (185)
70 PF04958 AstA: Arginine N-succ 98.2 3.8E-05 8.1E-10 63.0 12.7 161 23-206 1-187 (342)
71 PF12568 DUF3749: Acetyltransf 98.1 1.8E-05 3.9E-10 55.2 8.0 74 113-206 47-124 (128)
72 COG2388 Predicted acetyltransf 98.1 2E-05 4.3E-10 52.9 6.5 52 113-181 24-75 (99)
73 PRK10456 arginine succinyltran 98.0 7.1E-05 1.5E-09 61.3 10.8 160 23-206 1-185 (344)
74 COG4552 Eis Predicted acetyltr 97.9 1.9E-05 4E-10 64.1 5.5 59 144-207 69-127 (389)
75 COG0454 WecD Histone acetyltra 97.9 1.5E-05 3.2E-10 54.7 4.1 44 151-202 87-130 (156)
76 TIGR03245 arg_AOST_alph argini 97.8 0.00029 6.2E-09 57.6 9.7 159 25-206 1-184 (336)
77 PF00765 Autoind_synth: Autoin 97.8 0.0002 4.2E-09 54.2 8.3 142 28-207 4-155 (182)
78 TIGR03243 arg_catab_AOST argin 97.7 0.00039 8.4E-09 56.8 10.1 158 25-206 1-183 (335)
79 TIGR03244 arg_catab_AstA argin 97.7 0.00046 9.9E-09 56.5 10.2 158 25-206 1-183 (336)
80 COG3053 CitC Citrate lyase syn 97.7 0.00094 2E-08 53.1 11.2 60 148-210 59-118 (352)
81 COG3882 FkbH Predicted enzyme 97.6 0.00021 4.6E-09 60.6 6.4 141 16-206 406-549 (574)
82 PRK13834 putative autoinducer 97.6 0.0028 6.1E-08 49.0 12.2 92 112-206 62-164 (207)
83 COG5628 Predicted acetyltransf 97.3 0.0017 3.8E-08 44.5 6.9 74 112-202 45-118 (143)
84 PF13880 Acetyltransf_13: ESCO 97.2 0.00042 9E-09 43.3 3.4 31 145-175 5-35 (70)
85 PF13480 Acetyltransf_6: Acety 97.2 0.0096 2.1E-07 42.5 10.7 56 113-186 80-135 (142)
86 TIGR03694 exosort_acyl putativ 97.1 0.012 2.6E-07 46.7 11.4 63 142-207 108-198 (241)
87 KOG2036 Predicted P-loop ATPas 97.0 0.019 4.1E-07 51.3 12.6 86 144-234 613-747 (1011)
88 PF06852 DUF1248: Protein of u 96.8 0.015 3.3E-07 43.6 9.1 81 113-207 56-137 (181)
89 COG3138 AstA Arginine/ornithin 96.7 0.011 2.4E-07 46.9 8.1 22 23-44 1-22 (336)
90 COG1243 ELP3 Histone acetyltra 96.7 0.0025 5.3E-08 54.0 4.6 50 154-206 459-508 (515)
91 COG3916 LasI N-acyl-L-homoseri 96.0 0.15 3.2E-06 39.0 10.2 93 112-207 61-163 (209)
92 COG3375 Uncharacterized conser 96.0 0.23 5E-06 38.3 11.1 68 145-212 74-142 (266)
93 TIGR03827 GNAT_ablB putative b 95.4 0.068 1.5E-06 43.0 7.2 63 161-233 21-83 (266)
94 KOG2535 RNA polymerase II elon 95.3 0.03 6.6E-07 45.8 4.6 48 156-206 498-546 (554)
95 PF01233 NMT: Myristoyl-CoA:pr 95.3 0.57 1.2E-05 34.3 10.6 60 112-181 87-146 (162)
96 PF05301 Mec-17: Touch recepto 95.2 0.2 4.4E-06 34.7 7.7 86 113-206 18-103 (120)
97 TIGR03019 pepcterm_femAB FemAB 94.7 0.65 1.4E-05 38.6 11.3 58 150-207 224-281 (330)
98 PRK14852 hypothetical protein; 94.4 0.59 1.3E-05 44.2 11.0 68 142-212 118-186 (989)
99 PF01853 MOZ_SAS: MOZ/SAS fami 93.7 0.26 5.7E-06 37.1 6.1 34 146-179 81-114 (188)
100 COG2401 ABC-type ATPase fused 93.6 0.036 7.7E-07 47.0 1.4 65 142-206 238-307 (593)
101 KOG3698 Hyaluronoglucosaminida 93.6 0.99 2.1E-05 39.8 10.0 60 151-210 822-881 (891)
102 PRK01305 arginyl-tRNA-protein 93.4 0.45 9.8E-06 37.6 7.2 78 112-209 152-229 (240)
103 PF04377 ATE_C: Arginine-tRNA- 92.9 0.68 1.5E-05 32.8 6.9 59 112-188 47-105 (128)
104 cd04264 DUF619-NAGS DUF619 dom 92.9 0.35 7.5E-06 32.6 5.2 44 144-192 33-76 (99)
105 PF11124 Pho86: Inorganic phos 91.8 1.3 2.8E-05 36.0 8.0 91 98-206 170-270 (304)
106 PHA00432 internal virion prote 91.6 1.6 3.5E-05 31.2 7.5 30 178-207 92-121 (137)
107 PLN03238 probable histone acet 91.5 0.76 1.6E-05 37.0 6.4 32 147-178 157-188 (290)
108 KOG2779 N-myristoyl transferas 91.2 3.2 7E-05 34.5 9.7 77 113-199 145-224 (421)
109 cd04265 DUF619-NAGS-U DUF619 d 91.2 0.36 7.7E-06 32.6 3.6 44 144-192 33-76 (99)
110 PLN03239 histone acetyltransfe 89.5 1.2 2.5E-05 37.0 6.0 32 147-178 215-246 (351)
111 PF04768 DUF619: Protein of un 89.5 4.5 9.8E-05 30.2 8.7 56 143-204 86-143 (170)
112 PTZ00064 histone acetyltransfe 89.2 1 2.2E-05 39.1 5.6 33 147-179 386-418 (552)
113 PF02474 NodA: Nodulation prot 86.7 1.3 2.9E-05 32.8 4.2 53 145-201 85-137 (196)
114 PF13444 Acetyltransf_5: Acety 86.2 2.8 6.1E-05 28.2 5.5 54 114-167 41-100 (101)
115 COG5092 NMT1 N-myristoyl trans 86.0 9 0.0002 31.4 8.8 144 25-206 83-230 (451)
116 PLN00104 MYST -like histone ac 85.9 1.2 2.6E-05 38.3 4.2 32 147-178 308-339 (450)
117 KOG2696 Histone acetyltransfer 83.8 1.9 4.2E-05 35.9 4.3 42 146-188 218-259 (403)
118 KOG4601 Uncharacterized conser 81.4 1.8 4E-05 33.6 3.1 80 113-200 81-160 (264)
119 KOG2747 Histone acetyltransfer 80.2 3.5 7.6E-05 34.9 4.7 33 146-178 261-293 (396)
120 PF02799 NMT_C: Myristoyl-CoA: 78.3 28 0.0006 26.6 10.8 41 163-206 124-164 (190)
121 KOG2779 N-myristoyl transferas 78.1 18 0.0004 30.2 8.0 41 163-206 356-396 (421)
122 PF09390 DUF1999: Protein of u 77.7 17 0.00037 26.2 6.8 76 113-206 65-140 (161)
123 PHA02769 hypothetical protein; 76.5 3 6.5E-05 28.6 2.7 45 163-209 94-141 (154)
124 COG2935 Putative arginyl-tRNA: 74.7 20 0.00044 28.4 7.1 39 151-189 180-218 (253)
125 KOG3014 Protein involved in es 73.5 6 0.00013 31.2 4.0 52 140-191 178-231 (257)
126 PF09924 DUF2156: Uncharacteri 73.5 43 0.00094 27.3 9.4 59 113-188 190-248 (299)
127 PF11090 DUF2833: Protein of u 69.0 14 0.00031 24.1 4.4 43 162-206 41-83 (86)
128 COG5630 ARG2 Acetylglutamate s 68.9 29 0.00063 29.4 7.2 34 142-175 397-431 (495)
129 PF12261 T_hemolysin: Thermost 68.7 27 0.00059 26.3 6.5 59 141-206 83-141 (179)
130 cd04266 DUF619-NAGS-FABP DUF61 66.4 16 0.00034 25.1 4.4 49 143-197 37-87 (108)
131 PF11039 DUF2824: Protein of u 66.2 45 0.00098 23.7 9.0 80 113-212 47-127 (151)
132 PHA01733 hypothetical protein 63.8 10 0.00022 27.7 3.3 46 165-210 89-135 (153)
133 PF04339 DUF482: Protein of un 59.5 75 0.0016 27.1 8.2 128 23-210 199-332 (370)
134 PRK00756 acyltransferase NodA; 58.9 20 0.00044 26.6 4.1 43 145-188 85-127 (196)
135 PTZ00129 40S ribosomal protein 58.2 54 0.0012 23.9 6.2 54 163-216 74-138 (149)
136 COG5027 SAS2 Histone acetyltra 57.4 6 0.00013 32.8 1.3 30 146-175 263-292 (395)
137 PF07395 Mig-14: Mig-14; Inte 57.3 55 0.0012 26.4 6.6 109 25-181 128-240 (264)
138 COG3473 Maleate cis-trans isom 57.1 19 0.00041 27.9 3.8 40 169-208 108-150 (238)
139 COG5092 NMT1 N-myristoyl trans 49.4 74 0.0016 26.3 6.2 19 25-43 260-278 (451)
140 cd03173 DUF619-like DUF619 dom 48.4 35 0.00077 22.9 3.7 48 144-197 32-79 (98)
141 PRK02983 lysS lysyl-tRNA synth 47.6 1.1E+02 0.0023 30.3 8.2 59 112-188 429-487 (1094)
142 PRK15312 antimicrobial resista 44.7 1.1E+02 0.0024 25.1 6.5 108 25-180 156-269 (298)
143 COG2266 GTP:adenosylcobinamide 42.6 64 0.0014 24.2 4.6 46 163-209 26-71 (177)
144 TIGR03628 arch_S11P archaeal r 42.3 1.1E+02 0.0025 21.1 6.2 53 160-212 44-108 (114)
145 cd07235 MRD Mitomycin C resist 42.3 25 0.00054 23.8 2.5 24 182-206 4-27 (122)
146 PF12953 DUF3842: Domain of un 42.0 31 0.00067 24.4 2.8 51 157-211 7-57 (131)
147 PRK04531 acetylglutamate kinas 41.4 1.3E+02 0.0028 25.9 7.0 54 145-204 310-365 (398)
148 PF00925 GTP_cyclohydro2: GTP 40.8 27 0.00058 26.0 2.5 46 155-209 123-168 (169)
149 PF04816 DUF633: Family of unk 40.2 33 0.00071 26.5 3.0 48 161-208 74-123 (205)
150 PRK09607 rps11p 30S ribosomal 39.5 1.4E+02 0.003 21.3 6.1 54 163-216 55-119 (132)
151 cd09012 Glo_EDI_BRP_like_24 Th 39.1 21 0.00045 24.4 1.6 18 190-207 11-28 (124)
152 cd08353 Glo_EDI_BRP_like_7 Thi 39.0 26 0.00056 24.6 2.2 28 179-207 4-31 (142)
153 TIGR02990 ectoine_eutA ectoine 38.5 42 0.00092 26.6 3.4 45 164-208 105-152 (239)
154 cd08356 Glo_EDI_BRP_like_17 Th 37.2 21 0.00045 24.2 1.4 20 190-209 12-31 (113)
155 COG0807 RibA GTP cyclohydrolas 37.1 52 0.0011 25.2 3.5 52 151-211 120-171 (193)
156 cd08342 HPPD_N_like N-terminal 36.8 46 0.00099 23.3 3.2 28 181-209 3-31 (136)
157 COG2898 Uncharacterized conser 36.4 1.8E+02 0.0038 26.3 7.1 60 112-188 401-460 (538)
158 PF13380 CoA_binding_2: CoA bi 34.5 90 0.002 21.5 4.2 42 165-206 66-107 (116)
159 cd08350 BLMT_like BLMT, a bleo 32.9 33 0.00071 23.3 1.8 21 189-209 12-32 (120)
160 CHL00041 rps11 ribosomal prote 32.6 1.7E+02 0.0037 20.3 6.0 57 156-212 50-110 (116)
161 PRK09318 bifunctional 3,4-dihy 31.8 79 0.0017 27.1 4.2 36 173-210 322-357 (387)
162 PF05580 Peptidase_S55: SpoIVB 30.7 61 0.0013 25.2 3.0 24 99-122 176-199 (218)
163 PRK10150 beta-D-glucuronidase; 29.9 2.6E+02 0.0056 25.5 7.5 69 142-210 288-358 (604)
164 TIGR02860 spore_IV_B stage IV 29.8 88 0.0019 27.0 4.1 35 99-162 356-390 (402)
165 PRK14831 undecaprenyl pyrophos 29.6 63 0.0014 25.8 3.1 34 155-188 41-74 (249)
166 COG2384 Predicted SAM-dependen 28.8 90 0.002 24.5 3.7 48 161-208 93-142 (226)
167 COG3010 NanE Putative N-acetyl 28.3 96 0.0021 24.1 3.7 72 151-227 102-173 (229)
168 PRK00393 ribA GTP cyclohydrola 28.0 1.1E+02 0.0024 23.4 4.1 48 153-209 123-170 (197)
169 cd07267 THT_Oxygenase_N N-term 27.9 52 0.0011 22.0 2.2 28 180-208 5-32 (113)
170 TIGR00055 uppS undecaprenyl di 27.5 85 0.0018 24.7 3.4 34 155-188 20-53 (226)
171 TIGR03632 bact_S11 30S ribosom 27.4 2.1E+02 0.0045 19.6 6.0 62 153-214 34-99 (108)
172 TIGR00505 ribA GTP cyclohydrol 27.4 1.2E+02 0.0026 23.0 4.2 47 154-209 121-167 (191)
173 PRK14837 undecaprenyl pyrophos 27.1 88 0.0019 24.7 3.4 34 155-188 27-60 (230)
174 cd08358 Glo_EDI_BRP_like_21 Th 27.1 88 0.0019 22.0 3.2 26 182-208 6-32 (127)
175 PRK09319 bifunctional 3,4-dihy 26.4 1E+02 0.0022 27.8 4.1 37 172-210 344-380 (555)
176 cd08344 MhqB_like_N N-terminal 26.2 60 0.0013 21.6 2.2 28 179-207 3-30 (112)
177 PF04015 DUF362: Domain of unk 26.0 1.3E+02 0.0027 23.0 4.2 48 160-207 18-67 (206)
178 PF02836 Glyco_hydro_2_C: Glyc 25.7 1.9E+02 0.0041 23.5 5.4 67 144-210 13-81 (298)
179 PF01255 Prenyltransf: Putativ 25.2 86 0.0019 24.5 3.1 35 155-189 15-49 (223)
180 PF01751 Toprim: Toprim domain 24.1 73 0.0016 21.1 2.3 33 151-184 65-97 (100)
181 PF08901 DUF1847: Protein of u 23.6 1E+02 0.0022 22.7 3.0 42 167-208 43-88 (157)
182 PRK14841 undecaprenyl pyrophos 23.5 1.1E+02 0.0024 24.1 3.5 34 155-188 24-57 (233)
183 COG3414 SgaB Phosphotransferas 23.1 1.5E+02 0.0032 19.7 3.5 22 159-180 9-32 (93)
184 cd00475 CIS_IPPS Cis (Z)-Isopr 23.0 1.2E+02 0.0025 23.8 3.4 34 155-188 21-54 (221)
185 cd08346 PcpA_N_like N-terminal 23.0 96 0.0021 20.7 2.8 30 179-209 2-32 (126)
186 TIGR03645 glyox_marine lactoyl 22.8 79 0.0017 23.1 2.4 28 178-206 4-32 (162)
187 cd07253 Glo_EDI_BRP_like_2 Thi 22.8 87 0.0019 20.8 2.5 31 178-209 3-34 (125)
188 PRK10240 undecaprenyl pyrophos 22.7 1.1E+02 0.0023 24.2 3.2 34 155-188 14-47 (229)
189 PRK14832 undecaprenyl pyrophos 22.7 1.1E+02 0.0024 24.6 3.3 34 155-188 39-72 (253)
190 PRK08815 GTP cyclohydrolase; P 22.3 1.4E+02 0.003 25.5 4.0 36 173-210 307-342 (375)
191 PRK03681 hypA hydrogenase nick 22.2 1.5E+02 0.0033 20.4 3.6 24 159-182 3-26 (114)
192 PF10566 Glyco_hydro_97: Glyco 22.1 1.7E+02 0.0037 23.8 4.3 41 165-206 73-124 (273)
193 cd07242 Glo_EDI_BRP_like_6 Thi 21.8 99 0.0021 20.9 2.7 30 178-208 1-34 (128)
194 PF03376 Adeno_E3B: Adenovirus 21.7 41 0.00089 20.5 0.6 13 154-166 53-65 (67)
195 PRK14019 bifunctional 3,4-dihy 21.7 1.2E+02 0.0027 25.8 3.6 36 171-209 328-363 (367)
196 PRK14829 undecaprenyl pyrophos 21.5 1.1E+02 0.0024 24.3 3.1 34 155-188 35-68 (243)
197 PRK05031 tRNA (uracil-5-)-meth 21.3 2.4E+02 0.0051 23.9 5.2 60 149-216 290-350 (362)
198 PRK14842 undecaprenyl pyrophos 21.2 1.3E+02 0.0029 23.9 3.4 34 155-188 29-62 (241)
199 cd08362 BphC5-RrK37_N_like N-t 21.0 70 0.0015 21.3 1.7 32 178-210 3-35 (120)
200 PRK05309 30S ribosomal protein 20.9 3.1E+02 0.0068 19.4 6.0 62 155-216 53-118 (128)
201 PTZ00349 dehydrodolichyl dipho 20.9 1.2E+02 0.0026 25.2 3.3 34 155-188 40-73 (322)
202 COG3607 Predicted lactoylgluta 20.9 45 0.00098 23.5 0.7 17 191-207 15-31 (133)
203 PLN02831 Bifunctional GTP cycl 20.6 1.5E+02 0.0033 26.0 4.0 37 172-210 374-410 (450)
204 PF12162 STAT1_TAZ2bind: STAT1 20.6 48 0.001 15.7 0.5 16 25-40 6-21 (23)
205 COG2231 Uncharacterized protei 20.2 79 0.0017 24.5 1.9 40 160-206 121-160 (215)
206 PRK14839 undecaprenyl pyrophos 20.2 1.4E+02 0.003 23.8 3.3 34 155-188 30-63 (239)
207 PRK14840 undecaprenyl pyrophos 20.1 1.4E+02 0.003 24.0 3.3 34 155-188 43-76 (250)
No 1
>PRK10146 aminoalkylphosphonic acid N-acetyltransferase; Provisional
Probab=99.80 E-value=5.2e-19 Score=129.20 Aligned_cols=136 Identities=21% Similarity=0.242 Sum_probs=97.7
Q ss_pred CCceeeeccccCHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhccccccccceeeEEEEECCccceeEEeecCcccc
Q 026519 22 PEIVVREARIEDIWEVAETHCSCFFPNYTFPLDLMLRVDRLVAMLSGFTVQHGTRRTCLVAVVGSRMDETFFLGSEDFKV 101 (237)
Q Consensus 22 ~~l~iR~~~~~D~~~l~~l~~~~f~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~v~~~~~~~ 101 (237)
+++.||+++++|++.+.++........+.. ......+...+. .+...++++..+
T Consensus 2 ~~~~ir~a~~~D~~~l~~l~~~~~~~~~~~----~~~~~~~~~~l~-------------------~~~~~~~v~~~~--- 55 (144)
T PRK10146 2 PACELRPATQYDTDAVYALICELKQAEFDH----QAFRVGFNANLR-------------------DPNMRYHLALLD--- 55 (144)
T ss_pred CccEEeeCcHhhHHHHHHHHHHHhcccCCH----HHHHHHHHHHhc-------------------CCCceEEEEEEC---
Confidence 468999999999999999987664333221 111222222211 112233344433
Q ss_pred cccCCcccccCCceEEEEEeccccCccCCCCCccccccCCCCCeeEEEEEEecccccccChHHHHHHHHHHHHHHcCCcE
Q 026519 102 GGLDGKFSLHRGYVAGILTVDTVADFLPRKGPLRQRSSFHRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRS 181 (237)
Q Consensus 102 ~g~~~~~~~~~~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~g~~~ 181 (237)
+++||++.+....... .....++|..++|+|++||+|||+.|+++++++|++.|+..
T Consensus 56 -----------~~ivG~~~~~~~~~~~------------~~~~~~~i~~l~v~p~~rg~GiG~~Ll~~~~~~a~~~~~~~ 112 (144)
T PRK10146 56 -----------GEVVGMIGLHLQFHLH------------HVNWIGEIQELVVMPQARGLNVGSKLLAWAEEEARQAGAEM 112 (144)
T ss_pred -----------CEEEEEEEEEeccccc------------ccchhheeheeEECHHHcCCCHHHHHHHHHHHHHHHcCCcE
Confidence 7899998875321110 01123578899999999999999999999999999999999
Q ss_pred EEEEeecCCcchHhHHhhCCCeEee
Q 026519 182 IALHCDFNNLGATKLYKGQGFKCVK 206 (237)
Q Consensus 182 i~l~~~~~N~~a~~fy~k~GF~~~~ 206 (237)
+.|.+...|..|++||+++||+..+
T Consensus 113 i~l~~~~~n~~a~~fY~~~Gf~~~~ 137 (144)
T PRK10146 113 TELSTNVKRHDAHRFYLREGYEQSH 137 (144)
T ss_pred EEEecCCCchHHHHHHHHcCCchhh
Confidence 9999999999999999999998775
No 2
>TIGR02382 wecD_rffC TDP-D-fucosamine acetyltransferase. This model represents the WecD protein (Formerly RffC) for the biosynthesis of enterobacterial common antigen (ECA), an outer leaflet, outer membrane glycolipid with a trisaccharide repeat unit. WecD is a member of the GNAT family of acetytransferases (pfam00583).
Probab=99.79 E-value=6e-18 Score=129.56 Aligned_cols=144 Identities=17% Similarity=0.159 Sum_probs=98.9
Q ss_pred CCCCceeeeccccCHHHHHHHhhccCCCC-CCCCc-hhHHHHHHHHHHHhccccccccceeeEEEEECCccceeEEeecC
Q 026519 20 XSPEIVVREARIEDIWEVAETHCSCFFPN-YTFPL-DLMLRVDRLVAMLSGFTVQHGTRRTCLVAVVGSRMDETFFLGSE 97 (237)
Q Consensus 20 ~~~~l~iR~~~~~D~~~l~~l~~~~f~~~-~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~v~~~ 97 (237)
....+.||+++++|++.+.++..+.+... +..+. +.......+......+.. .......+++...
T Consensus 40 ~~~~~~lR~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~i~~~~ 106 (191)
T TIGR02382 40 ATSDPGARVATETDIPALRQLASAAFALSRFRAPWYAPDDSGRFYAQWVENAVR-------------GTFDHQCLILRDA 106 (191)
T ss_pred CCCCCcceeCChhhHHHHHHHHHHHhhccccCCCCcCHHHHHHHHHHHHHHHhc-------------CCCCCeEEEEEcc
Confidence 33457899999999999999998876321 21111 111111111121111100 0001112222332
Q ss_pred cccccccCCcccccCCceEEEEEeccccCccCCCCCccccccCCCCCeeEEEEEEecccccccChHHHHHHHHHHHHHHc
Q 026519 98 DFKVGGLDGKFSLHRGYVAGILTVDTVADFLPRKGPLRQRSSFHRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGW 177 (237)
Q Consensus 98 ~~~~~g~~~~~~~~~~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~ 177 (237)
+ +++||++.+... .....+|..++|+|++||+|+|+.|+++++++++++
T Consensus 107 ~--------------g~iiG~i~l~~~-----------------~~~~~~i~~l~V~p~~rGkG~G~~ll~~~~~~a~~~ 155 (191)
T TIGR02382 107 S--------------GDPRGYVTLREL-----------------NDTDARIGLLAVFPGAQSRGIGAELMQTALNWCYAR 155 (191)
T ss_pred C--------------CeEEEEEEEEec-----------------CCCceEEEEEEECHHHcCCCHHHHHHHHHHHHHHHc
Confidence 3 789999887532 112367888999999999999999999999999999
Q ss_pred CCcEEEEEeecCCcchHhHHhhCCCeEeec
Q 026519 178 GCRSIALHCDFNNLGATKLYKGQGFKCVKV 207 (237)
Q Consensus 178 g~~~i~l~~~~~N~~a~~fy~k~GF~~~~~ 207 (237)
|+..+.+.|..+|.+|++||+|+||+.+++
T Consensus 156 g~~~I~l~v~~~N~~A~~~Y~klGF~~~~~ 185 (191)
T TIGR02382 156 GLTRLRVATQMGNTAALRLYIRSGANIEST 185 (191)
T ss_pred CCCEEEEEeCCCCHHHHHHHHHcCCccccc
Confidence 999999999999999999999999998875
No 3
>TIGR03827 GNAT_ablB putative beta-lysine N-acetyltransferase. Members of this protein family are GNAT family acetyltransferases, based on a seed alignment in which every member is associated with a lysine 2,3-aminomutase family protein, usually as the adjacent gene. This family includes AblB, the enzyme beta-lysine acetyltransferase that completes the two-step synthesis of the osmolyte (compatible solute) N-epsilon-acetyl-beta-lysine; all members of the family may have this function. Note that N-epsilon-acetyl-beta-lysine has been observed only in methanogenic archaea (e.g. Methanosarcina) but that this model, paired with TIGR03820, suggests a much broader distribution.
Probab=99.79 E-value=4.6e-18 Score=136.64 Aligned_cols=155 Identities=18% Similarity=0.225 Sum_probs=114.5
Q ss_pred CCCCceeeeccccCHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhccccccccceeeEEEEECCccceeEEeecCcc
Q 026519 20 XSPEIVVREARIEDIWEVAETHCSCFFPNYTFPLDLMLRVDRLVAMLSGFTVQHGTRRTCLVAVVGSRMDETFFLGSEDF 99 (237)
Q Consensus 20 ~~~~l~iR~~~~~D~~~l~~l~~~~f~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~v~~~~~ 99 (237)
+++.+.||+++++|++++.+|....|.. ++.+..... .+...+. ....++++..+
T Consensus 112 ~~~~~~IR~a~~~D~~~l~~L~~~v~~~-~~~~~~~~~---~l~~~~~--------------------~~~~~~v~~~~- 166 (266)
T TIGR03827 112 LPEGFTLRIATEDDADAMAALYRKVFPT-YPFPIHDPA---YLLETMK--------------------SNVVYFGVEDG- 166 (266)
T ss_pred CCCceEEEECCHHHHHHHHHHHHHHhcc-CCCCccCHH---HHHHHhc--------------------CCcEEEEEEEC-
Confidence 4567999999999999999999988743 222221111 1111111 11223333333
Q ss_pred cccccCCcccccCCceEEEEEeccccCccCCCCCccccccCCCCCeeEEEEEEecccccccChHHHHHHHHHHHHHHcCC
Q 026519 100 KVGGLDGKFSLHRGYVAGILTVDTVADFLPRKGPLRQRSSFHRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGC 179 (237)
Q Consensus 100 ~~~g~~~~~~~~~~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~g~ 179 (237)
+++||++.+.... ....++|..++|+|+|||+|||+.||+++++++++.|+
T Consensus 167 -------------g~iVG~~~~~~~~----------------~~~~~eI~~i~V~P~yRG~GiG~~Ll~~l~~~a~~~g~ 217 (266)
T TIGR03827 167 -------------GKIIALASAEMDP----------------ENGNAEMTDFATLPEYRGKGLAKILLAAMEKEMKEKGI 217 (266)
T ss_pred -------------CEEEEEEEEecCC----------------CCCcEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCC
Confidence 7899988763210 12348899999999999999999999999999999999
Q ss_pred cEEEEEeecCCcchHhHHhhCCCeEeecCCCCCCCCCCCCCCceeEeeeecc
Q 026519 180 RSIALHCDFNNLGATKLYKGQGFKCVKVPEGANWPQPKNSPDVKFKFMMKLL 231 (237)
Q Consensus 180 ~~i~l~~~~~N~~a~~fy~k~GF~~~~~~~~~~~~~~~~~~~~~~~~m~k~L 231 (237)
..+++.+...|.++..+|+|+||+..++.++.....+.+.+ ..++.|.|
T Consensus 218 ~~l~~~~~~~n~~a~~ly~k~GF~~~G~l~n~~~i~G~~~d---~~i~~k~l 266 (266)
T TIGR03827 218 RTAYTIARASSYGMNITFARLGYAYGGTLVNNTNISGGFES---MNIWYKQL 266 (266)
T ss_pred cEEEeehhhcchhHHHHHHHcCCccccEEeecceecCCccc---ceeeeecC
Confidence 99999999999999999999999999999887777777666 45666543
No 4
>COG1247 Sortase and related acyltransferases [Cell envelope biogenesis, outer membrane]
Probab=99.76 E-value=2.7e-17 Score=120.79 Aligned_cols=163 Identities=18% Similarity=0.181 Sum_probs=120.1
Q ss_pred ceeeeccccCHHHHHHHhhccCCCC---CCC-CchhHHHHHHHHHHHhccccccccceeeEEEEECCccceeEEeecCcc
Q 026519 24 IVVREARIEDIWEVAETHCSCFFPN---YTF-PLDLMLRVDRLVAMLSGFTVQHGTRRTCLVAVVGSRMDETFFLGSEDF 99 (237)
Q Consensus 24 l~iR~~~~~D~~~l~~l~~~~f~~~---~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~v~~~~~ 99 (237)
+.||+++.+|++.|.++++...... |.. +.+.....+.+..... ..-.++|++.+
T Consensus 2 ~~ir~~~~~Dl~~I~~IY~~~v~~~~a~~e~~~~~~~~~~~~~~~~~~--------------------~g~p~~V~~~~- 60 (169)
T COG1247 2 MEIRPATAADLEAILEIYNGAVENTAATFEEDPVSLEERAAWFSGRTR--------------------DGYPVVVAEEE- 60 (169)
T ss_pred cEEecChHHhHHHHHHHHHHhhhcceEEEeccCCCHHHHHHHHHhccc--------------------CCceEEEEEcC-
Confidence 6899999999999999988776332 111 1123333333322111 01133344322
Q ss_pred cccccCCcccccCCceEEEEEeccccCccCCCCCccccccCCCCCeeEEEEEEecccccccChHHHHHHHHHHHHHHcCC
Q 026519 100 KVGGLDGKFSLHRGYVAGILTVDTVADFLPRKGPLRQRSSFHRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGC 179 (237)
Q Consensus 100 ~~~g~~~~~~~~~~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~g~ 179 (237)
+|+++|++.+...-.+ +.=....-.+++|+|++||+|||++|++.+++.+..+|+
T Consensus 61 ------------~g~v~G~a~~~~fr~r-------------~ay~~tve~SiYv~~~~~g~GiG~~Ll~~Li~~~~~~g~ 115 (169)
T COG1247 61 ------------DGKVLGYASAGPFRER-------------PAYRHTVELSIYLDPAARGKGLGKKLLQALITEARALGV 115 (169)
T ss_pred ------------CCeEEEEEEeeeccCc-------------cccceEEEEEEEECcccccccHHHHHHHHHHHHHHhCCe
Confidence 3889999988654222 122235566699999999999999999999999999999
Q ss_pred cEEEEEeecCCcchHhHHhhCCCeEeecCCCCCCCCCCCCCCceeEeeeeccCCCC
Q 026519 180 RSIALHCDFNNLGATKLYKGQGFKCVKVPEGANWPQPKNSPDVKFKFMMKLLKAPT 235 (237)
Q Consensus 180 ~~i~l~~~~~N~~a~~fy~k~GF~~~~~~~~~~~~~~~~~~~~~~~~m~k~L~~~~ 235 (237)
+.+...+.++|.+++++.+++||+.++..+...+.++.|-| .++|.+.|+++.
T Consensus 116 ~~lva~I~~~n~aSi~lh~~~GF~~~G~~~~vg~k~g~wld---~~~~~~~l~~~~ 168 (169)
T COG1247 116 RELVAGIESDNLASIALHEKLGFEEVGTFPEVGDKFGRWLD---LVLMQLLLEEGR 168 (169)
T ss_pred EEEEEEEcCCCcHhHHHHHHCCCEEeccccccccccceEEe---eeeeehhhcccC
Confidence 99999999999999999999999999999998888887766 788888887653
No 5
>PRK09491 rimI ribosomal-protein-alanine N-acetyltransferase; Provisional
Probab=99.76 E-value=2.1e-17 Score=121.14 Aligned_cols=97 Identities=21% Similarity=0.266 Sum_probs=77.6
Q ss_pred CceEEEEEeccccCccCCCCCccccccCCCCCeeEEEEEEecccccccChHHHHHHHHHHHHHHcCCcEEEEEeecCCcc
Q 026519 113 GYVAGILTVDTVADFLPRKGPLRQRSSFHRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDFNNLG 192 (237)
Q Consensus 113 ~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~g~~~i~l~~~~~N~~ 192 (237)
++++|++.+... .+...+..++|+|+|||+|+|+.+++.+++.+++.|+..+.+.+...|.+
T Consensus 49 ~~~vG~~~~~~~------------------~~~~~~~~i~v~~~~rg~G~g~~ll~~~~~~~~~~~~~~~~~~~~~~N~~ 110 (146)
T PRK09491 49 GQMAAFAITQVV------------------LDEATLFNIAVDPDYQRQGLGRALLEHLIDELEKRGVATLWLEVRASNAA 110 (146)
T ss_pred CeEEEEEEEEee------------------cCceEEEEEEECHHHccCCHHHHHHHHHHHHHHHCCCcEEEEEEccCCHH
Confidence 788998877432 11256778999999999999999999999999988999999999999999
Q ss_pred hHhHHhhCCCeEeecCCCCCCCCCCCCCCceeEeeeec
Q 026519 193 ATKLYKGQGFKCVKVPEGANWPQPKNSPDVKFKFMMKL 230 (237)
Q Consensus 193 a~~fy~k~GF~~~~~~~~~~~~~~~~~~~~~~~~m~k~ 230 (237)
+.+||+|+||+..+..+.+.+....+.| ...|.+.
T Consensus 111 a~~~y~k~Gf~~~~~~~~~~~~~~~~~d---~~~~~~~ 145 (146)
T PRK09491 111 AIALYESLGFNEVTIRRNYYPTADGRED---AIIMALP 145 (146)
T ss_pred HHHHHHHcCCEEeeeeeccccCCCCcee---EEEEecc
Confidence 9999999999999887766443233444 4555543
No 6
>PTZ00330 acetyltransferase; Provisional
Probab=99.74 E-value=8.5e-17 Score=117.85 Aligned_cols=139 Identities=19% Similarity=0.287 Sum_probs=92.5
Q ss_pred CCCCceeeeccccCHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhccccccccceeeEEEEECCccceeEEeecCcc
Q 026519 20 XSPEIVVREARIEDIWEVAETHCSCFFPNYTFPLDLMLRVDRLVAMLSGFTVQHGTRRTCLVAVVGSRMDETFFLGSEDF 99 (237)
Q Consensus 20 ~~~~l~iR~~~~~D~~~l~~l~~~~f~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~v~~~~~ 99 (237)
|..++.||+++++|++.+.++.......... +. .....+..... .. .....+++...+
T Consensus 3 ~~~~~~ir~~~~~D~~~i~~l~~~~~~~~~~---~~-~~~~~~~~~~~---~~--------------~~~~~~~~~~~~- 60 (147)
T PTZ00330 3 MSGSLELRDLEEGDLGSVLELLSHLTSAPAL---SQ-EELEQIAARRR---LA--------------GVVTRVFVHSPT- 60 (147)
T ss_pred CcceEEEEEcccccHHHHHHHHHHhcCCCcc---ch-hHHHHHHHHHh---cC--------------CCceEEEEEeCC-
Confidence 4556899999999999999998765432211 11 11111111100 00 011122333333
Q ss_pred cccccCCcccccCCceEEEEEeccccCccCCCCCccccccCCCCCeeEEEEEEecccccccChHHHHHHHHHHHHHHcCC
Q 026519 100 KVGGLDGKFSLHRGYVAGILTVDTVADFLPRKGPLRQRSSFHRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGC 179 (237)
Q Consensus 100 ~~~g~~~~~~~~~~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~g~ 179 (237)
+++||++.+........ .....++|..++|+|+|||+|||+.|++++++++++.|+
T Consensus 61 -------------~~~vG~~~~~~~~~~~~-----------~~~~~~~i~~~~V~~~~rg~Gig~~l~~~~~~~a~~~~~ 116 (147)
T PTZ00330 61 -------------QRIVGTASLFVEPKFTR-----------GGKCVGHIEDVVVDPSYRGQGLGRALISDLCEIARSSGC 116 (147)
T ss_pred -------------CEEEEEEEEEecccccc-----------CCCceEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCC
Confidence 78999988753211110 012247899999999999999999999999999999998
Q ss_pred cEEEEEeecCCcchHhHHhhCCCeEeec
Q 026519 180 RSIALHCDFNNLGATKLYKGQGFKCVKV 207 (237)
Q Consensus 180 ~~i~l~~~~~N~~a~~fy~k~GF~~~~~ 207 (237)
..+.+.+ |++|++||+|+||+....
T Consensus 117 ~~l~l~~---n~~a~~~y~k~GF~~~~~ 141 (147)
T PTZ00330 117 YKVILDC---TEDMVAFYKKLGFRACER 141 (147)
T ss_pred CEEEEec---ChHHHHHHHHCCCEEece
Confidence 8877754 679999999999998863
No 7
>PRK10975 TDP-fucosamine acetyltransferase; Provisional
Probab=99.74 E-value=9.4e-17 Score=123.26 Aligned_cols=142 Identities=19% Similarity=0.207 Sum_probs=97.6
Q ss_pred CceeeeccccCHHHHHHHhhccCCCC-CCCCc-hhHHHHHHHHHHHhccccccccceeeEEEEECCccceeEEeecCccc
Q 026519 23 EIVVREARIEDIWEVAETHCSCFFPN-YTFPL-DLMLRVDRLVAMLSGFTVQHGTRRTCLVAVVGSRMDETFFLGSEDFK 100 (237)
Q Consensus 23 ~l~iR~~~~~D~~~l~~l~~~~f~~~-~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~v~~~~~~ 100 (237)
...||+++++|++.+.++....|... +..+. ........+........ .+.....++++..+
T Consensus 46 ~~~iR~a~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~v~~~~-- 109 (194)
T PRK10975 46 TTGARVATETDIPALRQLAAQAFAQSRFRAPWYAPDDSGRFYAQWIENAV--------------RGTFDHQCLLLRDA-- 109 (194)
T ss_pred CCCcccCCcccHHHHHHHHHHHhhhccccCccCChhHHHHHHHHHHHHhh--------------ccccCCcEEEEEcC--
Confidence 46799999999999999998876432 21111 11111111222211100 00111122222211
Q ss_pred ccccCCcccccCCceEEEEEeccccCccCCCCCccccccCCCCCeeEEEEEEecccccccChHHHHHHHHHHHHHHcCCc
Q 026519 101 VGGLDGKFSLHRGYVAGILTVDTVADFLPRKGPLRQRSSFHRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCR 180 (237)
Q Consensus 101 ~~g~~~~~~~~~~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~g~~ 180 (237)
++++||++.+... ....++|..++|+|+|||+|+|+.|++.+++++++.|++
T Consensus 110 -----------~g~~vG~~~l~~~-----------------~~~~~~i~~~~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~ 161 (194)
T PRK10975 110 -----------SGQIQGFVTLREL-----------------NDTDARIGLLAVFPGAQGRGIGARLMQAALNWCQARGLT 161 (194)
T ss_pred -----------CCCEEEEEEEEec-----------------CCCceEEEEEEEChhhcCCCHHHHHHHHHHHHHHHcCCC
Confidence 2789999887532 112377888999999999999999999999999999999
Q ss_pred EEEEEeecCCcchHhHHhhCCCeEeecC
Q 026519 181 SIALHCDFNNLGATKLYKGQGFKCVKVP 208 (237)
Q Consensus 181 ~i~l~~~~~N~~a~~fy~k~GF~~~~~~ 208 (237)
.+.+.+..+|.++++||+|+||+.+++.
T Consensus 162 ~i~l~v~~~N~~a~~~yek~Gf~~~~~~ 189 (194)
T PRK10975 162 RLRVATQMGNLAALRLYIRSGANIESTA 189 (194)
T ss_pred EEEEEeCCCcHHHHHHHHHCCCeEeEEE
Confidence 9999999999999999999999999864
No 8
>PRK10140 putative acetyltransferase YhhY; Provisional
Probab=99.74 E-value=9.4e-17 Score=119.47 Aligned_cols=94 Identities=24% Similarity=0.358 Sum_probs=75.4
Q ss_pred CceEEEEEeccccCccCCCCCccccccCCCCCeeEEEEEEecccccccChHHHHHHHHHHHHHH-cCCcEEEEEeecCCc
Q 026519 113 GYVAGILTVDTVADFLPRKGPLRQRSSFHRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARG-WGCRSIALHCDFNNL 191 (237)
Q Consensus 113 ~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~-~g~~~i~l~~~~~N~ 191 (237)
+++||++.+..... +. ....+.+. ++|+|+|||+|||+.|++.+++++++ .|+..+.+.+.++|+
T Consensus 60 ~~~vG~~~~~~~~~--~~-----------~~~~~~~~-~~v~p~~rg~Gig~~ll~~l~~~~~~~~~~~~i~l~v~~~N~ 125 (162)
T PRK10140 60 GDVVGHLTIDVQQR--PR-----------RSHVADFG-ICVDSRWKNRGVASALMREMIEMCDNWLRVDRIELTVFVDNA 125 (162)
T ss_pred CEEEEEEEEecccc--cc-----------cceEEEEE-EEECHHHcCCCHHHHHHHHHHHHHHhhCCccEEEEEEEcCCH
Confidence 78999988853211 00 01123443 89999999999999999999999998 599999999999999
Q ss_pred chHhHHhhCCCeEeecCCCCCCCCCCCCC
Q 026519 192 GATKLYKGQGFKCVKVPEGANWPQPKNSP 220 (237)
Q Consensus 192 ~a~~fy~k~GF~~~~~~~~~~~~~~~~~~ 220 (237)
+|++||+|+||+..+..+...+..+.+.+
T Consensus 126 ~a~~~y~k~GF~~~g~~~~~~~~~~~~~d 154 (162)
T PRK10140 126 PAIKVYKKYGFEIEGTGKKYALRNGEYVD 154 (162)
T ss_pred HHHHHHHHCCCEEEeecccceeeCCeEEE
Confidence 99999999999999998877665555544
No 9
>TIGR02406 ectoine_EctA L-2,4-diaminobutyric acid acetyltransferase. This enzyme family is the EctA of ectoine biosynthesis. Ectoine is a compatible solute, analagous to trehalose, betaines, etc., found often in halotolerant organisms. EctA is L-2,4-diaminobutyric acid acetyltransferase, also called DABA acetyltransferase.
Probab=99.74 E-value=5e-17 Score=120.51 Aligned_cols=92 Identities=17% Similarity=0.178 Sum_probs=74.2
Q ss_pred CceEEEEEeccccCccCCCCCccccccCCCCCeeEEEEEEecccccccChHHHHHHHHHHHHHHcCCcEEEEEeecCCcc
Q 026519 113 GYVAGILTVDTVADFLPRKGPLRQRSSFHRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDFNNLG 192 (237)
Q Consensus 113 ~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~g~~~i~l~~~~~N~~ 192 (237)
+++||++...... ......++..++|+|++||+|||+.|++.++++++..+...+.+.|.++|.+
T Consensus 49 ~~ivG~~~~~~~~---------------~~~~~~~i~~l~V~p~~rg~GiG~~L~~~l~~~a~~~~~~~i~~~v~~~N~~ 113 (157)
T TIGR02406 49 GEIVGFVSGYLRP---------------DRPDVLFVWQVAVDPRARGKGLARRLLEALLERVACERVRHLETTITPDNQA 113 (157)
T ss_pred CeEEEEEEEEecC---------------CCCCeEEEEEEEEChHhccCcHHHHHHHHHHHHHHhCCCCEEEEEEcCCCHH
Confidence 6899987653211 1223478889999999999999999999999999998999999999999999
Q ss_pred hHhHHhhCCCeEeecCCCCCCCCCCCC
Q 026519 193 ATKLYKGQGFKCVKVPEGANWPQPKNS 219 (237)
Q Consensus 193 a~~fy~k~GF~~~~~~~~~~~~~~~~~ 219 (237)
|++||+|+||+......+.++.++...
T Consensus 114 a~~ly~k~G~~~~~~~~~~~~~~~~~~ 140 (157)
T TIGR02406 114 SRALFKALARRRGVHLIEEPFFDGELF 140 (157)
T ss_pred HHHHHHHhCcccCCCeEeecccccccC
Confidence 999999999998776555544444433
No 10
>PRK03624 putative acetyltransferase; Provisional
Probab=99.73 E-value=1e-16 Score=116.12 Aligned_cols=129 Identities=22% Similarity=0.279 Sum_probs=92.4
Q ss_pred CceeeeccccCHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhccccccccceeeEEEEECCccceeEEeecCccccc
Q 026519 23 EIVVREARIEDIWEVAETHCSCFFPNYTFPLDLMLRVDRLVAMLSGFTVQHGTRRTCLVAVVGSRMDETFFLGSEDFKVG 102 (237)
Q Consensus 23 ~l~iR~~~~~D~~~l~~l~~~~f~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~ 102 (237)
.+.||+++++|++.+.++..... ...... .....+..... .+...++++..+
T Consensus 2 ~~~ir~~~~~d~~~i~~l~~~~~---~~~~~~--~~~~~~~~~~~-------------------~~~~~~~v~~~~---- 53 (140)
T PRK03624 2 AMEIRVFRQADFEAVIALWERCD---LTRPWN--DPEMDIERKLN-------------------HDPSLFLVAEVG---- 53 (140)
T ss_pred ceEEEEcccccHHHHHHHHHhcC---CCcchh--hHHHHHHHHhc-------------------CCCceEEEEEcC----
Confidence 47899999999999999977651 111110 01111111111 011223333333
Q ss_pred ccCCcccccCCceEEEEEeccccCccCCCCCccccccCCCCCeeEEEEEEecccccccChHHHHHHHHHHHHHHcCCcEE
Q 026519 103 GLDGKFSLHRGYVAGILTVDTVADFLPRKGPLRQRSSFHRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSI 182 (237)
Q Consensus 103 g~~~~~~~~~~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~g~~~i 182 (237)
+++||++.+... .....+..++|+|+|||+|+|+.|++.+++++++.|++.+
T Consensus 54 ----------~~~vG~~~~~~~------------------~~~~~i~~i~v~p~~rg~Gig~~ll~~~~~~~~~~~~~~~ 105 (140)
T PRK03624 54 ----------GEVVGTVMGGYD------------------GHRGWAYYLAVHPDFRGRGIGRALVARLEKKLIARGCPKI 105 (140)
T ss_pred ----------CcEEEEEEeecc------------------CCCceEEEEEECHHHhCCCHHHHHHHHHHHHHHHCCCCEE
Confidence 789998876421 1124577799999999999999999999999999999999
Q ss_pred EEEeecCCcchHhHHhhCCCeEeec
Q 026519 183 ALHCDFNNLGATKLYKGQGFKCVKV 207 (237)
Q Consensus 183 ~l~~~~~N~~a~~fy~k~GF~~~~~ 207 (237)
.+.+.++|+.+++||+|+||+..+.
T Consensus 106 ~~~~~~~N~~~~~~y~k~GF~~~~~ 130 (140)
T PRK03624 106 NLQVREDNDAVLGFYEALGYEEQDR 130 (140)
T ss_pred EEEEecCcHHHHHHHHHcCCccccE
Confidence 9999999999999999999998764
No 11
>PRK10809 ribosomal-protein-S5-alanine N-acetyltransferase; Provisional
Probab=99.72 E-value=3.9e-16 Score=119.82 Aligned_cols=93 Identities=12% Similarity=0.077 Sum_probs=75.6
Q ss_pred CceEEEEEeccccCccCCCCCccccccCCCCCeeEEEEEEecccccccChHHHHHHHHHHHHHH-cCCcEEEEEeecCCc
Q 026519 113 GYVAGILTVDTVADFLPRKGPLRQRSSFHRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARG-WGCRSIALHCDFNNL 191 (237)
Q Consensus 113 ~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~-~g~~~i~l~~~~~N~ 191 (237)
+++||.+.+...... ....++|+ +.|+|+|||+|+|+.+++.+++++++ .|++.+.+.|.+.|.
T Consensus 86 ~~~iG~i~l~~~~~~--------------~~~~~eig-~~i~~~~~G~G~~~ea~~~ll~~~~~~l~l~~i~~~v~~~N~ 150 (194)
T PRK10809 86 KEIIGVANFSNVVRG--------------SFHACYLG-YSLGQKWQGQGLMFEALQAAIRYMQRQQHMHRIMANYMPHNK 150 (194)
T ss_pred CeEEEEEEEEeecCC--------------CeeeEEEE-EEECHHHcCCCHHHHHHHHHHHHHHhcCCceEEEEEeeCCCH
Confidence 789999988532110 11224555 88999999999999999999999987 599999999999999
Q ss_pred chHhHHhhCCCeEeecCCCCCCCCCCCCC
Q 026519 192 GATKLYKGQGFKCVKVPEGANWPQPKNSP 220 (237)
Q Consensus 192 ~a~~fy~k~GF~~~~~~~~~~~~~~~~~~ 220 (237)
+|+++|+|+||+.++..+......+.+.|
T Consensus 151 ~S~~l~ek~Gf~~~g~~~~~~~~~g~~~d 179 (194)
T PRK10809 151 RSGDLLARLGFEKEGYAKDYLLIDGQWRD 179 (194)
T ss_pred HHHHHHHHCCCcEEeeeccccccCCeEEE
Confidence 99999999999999988876655555444
No 12
>PLN02825 amino-acid N-acetyltransferase
Probab=99.71 E-value=7.8e-17 Score=138.33 Aligned_cols=162 Identities=15% Similarity=0.196 Sum_probs=116.8
Q ss_pred CCCCcccCCCCCCCCCCCCceeeeccccCHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhccccccccceeeEEEEE
Q 026519 5 SSDGIISNXXXXXXXXSPEIVVREARIEDIWEVAETHCSCFFPNYTFPLDLMLRVDRLVAMLSGFTVQHGTRRTCLVAVV 84 (237)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~l~iR~~~~~D~~~l~~l~~~~f~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~ 84 (237)
++||+.+-...-... .||+++++|++.|.+|++......+..... .+.+...
T Consensus 354 t~dg~gt~i~~~~~e-----~IR~At~eDi~~I~~Li~~lee~g~lv~rs----~e~le~e------------------- 405 (515)
T PLN02825 354 TRDGMGTMIASDMYE-----GTRMARVEDLAGIRQIIRPLEESGILVRRT----DEELLRA------------------- 405 (515)
T ss_pred ccCCceeEeccChHh-----hheeCCHHHHHHHHHHHHHHHHcCCCcCCC----HHHHHhc-------------------
Confidence 567777655444333 699999999999999987754333222111 0111110
Q ss_pred CCccceeEEeecCcccccccCCcccccCCceEEEEEeccccCccCCCCCccccccCCCCCeeEEEEEEecccccccChHH
Q 026519 85 GSRMDETFFLGSEDFKVGGLDGKFSLHRGYVAGILTVDTVADFLPRKGPLRQRSSFHRTGIAYISNVAVREKFRRKGIAK 164 (237)
Q Consensus 85 ~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~ 164 (237)
. ..+++.+.+ ++++|++.+... .....++|..++|+|+|||+|+|+
T Consensus 406 ---i-~~f~V~e~D--------------g~IVG~aal~~~----------------~~~~~aEI~~laV~P~yRGkGiG~ 451 (515)
T PLN02825 406 ---L-DSFVVVERE--------------GSIIACAALFPF----------------FEEKCGEVAAIAVSPECRGQGQGD 451 (515)
T ss_pred ---C-CcEEEEEEC--------------CEEEEEEEEEee----------------cCCCcEEEEEEEECHHHcCCCHHH
Confidence 0 124444444 889999886532 123458899999999999999999
Q ss_pred HHHHHHHHHHHHcCCcEEEEEeecCCcchHhHHhhCCCeEeecCCCCCCCCCCCCCCceeEeeeeccC
Q 026519 165 RLIAKAEAQARGWGCRSIALHCDFNNLGATKLYKGQGFKCVKVPEGANWPQPKNSPDVKFKFMMKLLK 232 (237)
Q Consensus 165 ~Ll~~~~~~~~~~g~~~i~l~~~~~N~~a~~fy~k~GF~~~~~~~~~~~~~~~~~~~~~~~~m~k~L~ 232 (237)
+||+++++.|+++|++.+.+.+ ..+.+||+++||+..+....+.-.+..|+......+++|.|.
T Consensus 452 ~LL~~le~~Ar~~G~~~L~Llt----t~a~~fY~k~GF~~~~~~~lp~~~~~~yn~~r~sk~~~k~l~ 515 (515)
T PLN02825 452 KLLDYIEKKAASLGLEKLFLLT----TRTADWFVRRGFSECSIESLPEARRKRINLSRGSKYYMKKLL 515 (515)
T ss_pred HHHHHHHHHHHHCCCCEEEEEe----CcHHHHHHHCCCEEeChhhCCHHHHhhcCccCCcEEEEEecC
Confidence 9999999999999999998876 357899999999999987776655666777777888888773
No 13
>PF13420 Acetyltransf_4: Acetyltransferase (GNAT) domain; PDB: 3DR8_A 3DR6_A 2AE6_B 2JLM_C 2J8R_A 1YVO_B 2J8M_A 2J8N_A 2BL1_A 3IWG_A ....
Probab=99.71 E-value=4.3e-17 Score=120.52 Aligned_cols=147 Identities=22% Similarity=0.300 Sum_probs=97.9
Q ss_pred eeeccccCHHHHHHHhhccCCC---CCCCCchhHHHHHHHHHHHhccccccccceeeEEEEECCccceeEEeecCccccc
Q 026519 26 VREARIEDIWEVAETHCSCFFP---NYTFPLDLMLRVDRLVAMLSGFTVQHGTRRTCLVAVVGSRMDETFFLGSEDFKVG 102 (237)
Q Consensus 26 iR~~~~~D~~~l~~l~~~~f~~---~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~ 102 (237)
||+++++|++.+.++.++.... .+..........++....... ......+.+...+
T Consensus 1 IR~~~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~v~~~~---- 59 (155)
T PF13420_consen 1 IRPATEEDLEEILKLYNEPRHEYFFTFEYPEDSEESFERWIESIID-----------------SSKQRLFLVAEED---- 59 (155)
T ss_dssp EEE--GGGHHHHHHHHHHHHHHTSSSSCSSHS-HHHHHHHHHHHHH-----------------HHTTEEEEEEECT----
T ss_pred CCCCcHHHHHHHHHHHhhhhhcceeEecCCCCCHHHHHHHHHHhcc-----------------cCCCcEEEEEEcC----
Confidence 7999999999999999764211 111111112222222221100 0112334444333
Q ss_pred ccCCcccccCCceEEEEEeccccCccCCCCCccccccCCCCCeeEEEEEEecccccccChHHHHHHHHHHHH-HHcCCcE
Q 026519 103 GLDGKFSLHRGYVAGILTVDTVADFLPRKGPLRQRSSFHRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQA-RGWGCRS 181 (237)
Q Consensus 103 g~~~~~~~~~~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~-~~~g~~~ 181 (237)
|++||++.+..... ....+.+. ++|.|++|++|+|+.|++.++++| ++.|++.
T Consensus 60 ----------g~iiG~~~~~~~~~---------------~~~~~~~~-~~v~~~~~~~gig~~l~~~l~~~af~~~~~~~ 113 (155)
T PF13420_consen 60 ----------GKIIGYVSLRDIDP---------------YNHTAELS-IYVSPDYRGKGIGRKLLDELIEYAFKELGIHK 113 (155)
T ss_dssp ----------TEEEEEEEEEESSS---------------GTTEEEEE-EEEEGGGTTSSHHHHHHHHHHHHH-HHTT-CE
T ss_pred ----------CcEEEEEEEEeeec---------------cCCEEEEe-eEEChhHCCCcHHHHHHHHHHHHhhhccCeEE
Confidence 89999998864321 22335555 888899999999999999999999 7889999
Q ss_pred EEEEeecCCcchHhHHhhCCCeEeecCCCCCCCCCCCC
Q 026519 182 IALHCDFNNLGATKLYKGQGFKCVKVPEGANWPQPKNS 219 (237)
Q Consensus 182 i~l~~~~~N~~a~~fy~k~GF~~~~~~~~~~~~~~~~~ 219 (237)
+++.+.++|.++++||+++||+.+++.++..+.++.|.
T Consensus 114 i~~~v~~~N~~~i~~~~~~GF~~~g~~~~~~~~~~~y~ 151 (155)
T PF13420_consen 114 IYLEVFSSNEKAINFYKKLGFEEEGELKDHIFINGKYY 151 (155)
T ss_dssp EEEEEETT-HHHHHHHHHTTEEEEEEEEEEEEETTEEE
T ss_pred EEEEEecCCHHHHHHHHhCCCEEEEEEecEEEECCeEE
Confidence 99999999999999999999999999887765555433
No 14
>PF13523 Acetyltransf_8: Acetyltransferase (GNAT) domain; PDB: 2VQY_A 2BUE_A 1V0C_A 1YK3_D 2PR8_A 2QIR_A 2PRB_A 2QML_A 2PC1_A.
Probab=99.69 E-value=6.4e-16 Score=113.97 Aligned_cols=141 Identities=18% Similarity=0.151 Sum_probs=94.1
Q ss_pred eeecc-ccCHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhccccccccceeeEEEEECCccceeEEeecCccccccc
Q 026519 26 VREAR-IEDIWEVAETHCSCFFPNYTFPLDLMLRVDRLVAMLSGFTVQHGTRRTCLVAVVGSRMDETFFLGSEDFKVGGL 104 (237)
Q Consensus 26 iR~~~-~~D~~~l~~l~~~~f~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~g~ 104 (237)
||+++ .+|++.|.+++++.....|...-......+.+...+.. .+....+++..+
T Consensus 1 ~R~a~~~~Dl~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~------------------~~~~~~~v~~~d------ 56 (152)
T PF13523_consen 1 LRPATTPDDLPLILQWLNQPHVREFWDQDPSQEWVEEYPEQLEA------------------DPGHHPYVAEDD------ 56 (152)
T ss_dssp EEE---GGGHHHHHHHHTSHHHHCCH-CCCTHHHHHHHHHHHCH------------------TTTEEEEEEEET------
T ss_pred CeeCccHHHHHHHHHHHHhHHHHHHccCCCCHHHHHHHHhhhcc------------------cCCceEEEEEEC------
Confidence 79999 99999999998776433332221112233333332210 112233333333
Q ss_pred CCcccccCCceEEEEEeccccCccCCCCCccccccCCCCCeeEEEEEEecccccccChHHHHHHHHHHHHHHc-CCcEEE
Q 026519 105 DGKFSLHRGYVAGILTVDTVADFLPRKGPLRQRSSFHRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGW-GCRSIA 183 (237)
Q Consensus 105 ~~~~~~~~~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~-g~~~i~ 183 (237)
|+++|++.+.......+. ......++.++|+|++||+|+|+.+++.+++.+++. ++..+.
T Consensus 57 --------g~~~g~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~rg~G~g~~~~~~~~~~~~~~~~~~~i~ 117 (152)
T PF13523_consen 57 --------GEPIGYFEIYWPDEDYDA-----------DDGDRGIHRLIVDPEYRGQGLGKAMLRALIEFLFEDPGVDRIV 117 (152)
T ss_dssp --------TEEEEEEEEEEGGGSS--------------TTEEEEEEEESTGGGTTSSHHHHHHHHHHHHHHTSTT--EEE
T ss_pred --------CEEEEEEEEecccccccC-----------CCCEEEEeeeeechhhcCCCHHHHHHHHHHHHHHhCCCCCEEE
Confidence 888998877443222110 345577888999999999999999999999999987 899999
Q ss_pred EEeecCCcchHhHHhhCCCeEeecCC
Q 026519 184 LHCDFNNLGATKLYKGQGFKCVKVPE 209 (237)
Q Consensus 184 l~~~~~N~~a~~fy~k~GF~~~~~~~ 209 (237)
+.+.++|.+++++|+|+||+.+++..
T Consensus 118 ~~~~~~N~~~~~~~~k~GF~~~g~~~ 143 (152)
T PF13523_consen 118 LDPHEDNTRAIRLYEKAGFRKVGEFE 143 (152)
T ss_dssp EEEBTT-HHHHHHHHHTT-EEEEEEE
T ss_pred EecCcCCHHHHHHHHHcCCEEeeEEE
Confidence 99999999999999999999999764
No 15
>PLN02706 glucosamine 6-phosphate N-acetyltransferase
Probab=99.68 E-value=1.5e-15 Score=111.72 Aligned_cols=81 Identities=25% Similarity=0.424 Sum_probs=64.9
Q ss_pred CceEEEEEeccccCccCCCCCccccccCCCCCeeEEEEEEecccccccChHHHHHHHHHHHHHHcCCcEEEEEeecCCcc
Q 026519 113 GYVAGILTVDTVADFLPRKGPLRQRSSFHRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDFNNLG 192 (237)
Q Consensus 113 ~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~g~~~i~l~~~~~N~~ 192 (237)
+++||++.+........ .....++|..++|+|+|||+|||+.|++.++++|++.|++.+.+.+.++|.
T Consensus 64 ~~ivG~~~~~~~~~~~~-----------~~~~~~~i~~i~V~~~~rg~GiG~~ll~~~~~~a~~~g~~~i~l~~~~~N~- 131 (150)
T PLN02706 64 GRIIATGSVFVERKFIR-----------NCGKVGHIEDVVVDSAARGKGLGKKIIEALTEHARSAGCYKVILDCSEENK- 131 (150)
T ss_pred CcEEEEEEEEEEeeccc-----------CCCcEEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHcCCCEEEEEeccccH-
Confidence 68888877642211100 012347788899999999999999999999999999999999999998884
Q ss_pred hHhHHhhCCCeEeec
Q 026519 193 ATKLYKGQGFKCVKV 207 (237)
Q Consensus 193 a~~fy~k~GF~~~~~ 207 (237)
+||+|+||+..+.
T Consensus 132 --~~y~k~GF~~~g~ 144 (150)
T PLN02706 132 --AFYEKCGYVRKEI 144 (150)
T ss_pred --HHHHHCcCEEehh
Confidence 6999999998873
No 16
>PRK10151 ribosomal-protein-L7/L12-serine acetyltransferase; Provisional
Probab=99.68 E-value=1.4e-15 Score=115.15 Aligned_cols=161 Identities=12% Similarity=0.161 Sum_probs=107.3
Q ss_pred CCCceeeeccccCHHHHHHHhhcc--C---CCCCCCCc-hhHHHHHHHHHHHhccccccccceeeEEEEECCccceeEEe
Q 026519 21 SPEIVVREARIEDIWEVAETHCSC--F---FPNYTFPL-DLMLRVDRLVAMLSGFTVQHGTRRTCLVAVVGSRMDETFFL 94 (237)
Q Consensus 21 ~~~l~iR~~~~~D~~~l~~l~~~~--f---~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~v 94 (237)
++.+.+|+++++|++.+.++..+. + ...|.... +.....+.+........ .....+++
T Consensus 8 t~rl~Lr~~~~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~----------------~~~~~~~~ 71 (179)
T PRK10151 8 SESLELHAVDESHVTPLHQLVCKNKTWLQQSLNWPQFVQSEEDTRKTVQGNVMLHQ----------------RGYAKMFM 71 (179)
T ss_pred CCcEEEEeCCHHHHHHHHHHHHHhHHHHHhcCCCcCccCCHHHHHHHHHHHHHHHh----------------cCCcEEEE
Confidence 357899999999999999997422 1 11233221 22223233322221110 00111222
Q ss_pred ecCcccccccCCcccccCCceEEEEEeccccCccCCCCCccccccCCCCCeeEEEEEEecccccccChHHHHHHHHHHHH
Q 026519 95 GSEDFKVGGLDGKFSLHRGYVAGILTVDTVADFLPRKGPLRQRSSFHRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQA 174 (237)
Q Consensus 95 ~~~~~~~~g~~~~~~~~~~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~ 174 (237)
...+ +++||++.+..... ....++|+ +.++|+|||+|+|+.+++.+++++
T Consensus 72 i~~~--------------~~~iG~~~l~~~~~---------------~~~~~~ig-~~i~~~~~g~G~~tea~~~l~~~~ 121 (179)
T PRK10151 72 IFKE--------------DELIGVLSFNRIEP---------------LNKTAYIG-YWLDESHQGQGIISQALQALIHHY 121 (179)
T ss_pred EEEC--------------CEEEEEEEEEeecc---------------CCCceEEE-EEEChhhcCCcHHHHHHHHHHHHH
Confidence 2223 78999988753211 12236665 689999999999999999999999
Q ss_pred HHc-CCcEEEEEeecCCcchHhHHhhCCCeEeecCCCCCCCCCCCCCCceeEeeeec
Q 026519 175 RGW-GCRSIALHCDFNNLGATKLYKGQGFKCVKVPEGANWPQPKNSPDVKFKFMMKL 230 (237)
Q Consensus 175 ~~~-g~~~i~l~~~~~N~~a~~fy~k~GF~~~~~~~~~~~~~~~~~~~~~~~~m~k~ 230 (237)
++. |++.+.+.+.+.|.+|.++|+|+||+.+++.+...+..+.+.| ..+|.+.
T Consensus 122 ~~~~~~~ri~~~v~~~N~~S~~v~ek~Gf~~~g~~~~~~~~~g~~~D---~~~~~~~ 175 (179)
T PRK10151 122 AQSGELRRFVIKCRVDNPASNQVALRNGFTLEGCLKQAEYLNGAYDD---VNLYARI 175 (179)
T ss_pred HhhCCccEEEEEEcCCCHHHHHHHHHCCCEEEeEeccceEECCEEEE---EEEEEEe
Confidence 864 8999999999999999999999999999998887666565554 4444443
No 17
>KOG3216 consensus Diamine acetyltransferase [Amino acid transport and metabolism]
Probab=99.66 E-value=2.6e-15 Score=105.94 Aligned_cols=83 Identities=24% Similarity=0.231 Sum_probs=71.6
Q ss_pred CceEEEEEeccccCccCCCCCccccccCCCCCeeEEEEEEecccccccChHHHHHHHHHHHHHHcCCcEEEEEeecCCcc
Q 026519 113 GYVAGILTVDTVADFLPRKGPLRQRSSFHRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDFNNLG 192 (237)
Q Consensus 113 ~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~g~~~i~l~~~~~N~~ 192 (237)
+.++|++..-..- .+| ...+..||..|+|.|+|||+|+|+.|++.+.+.|.+.|..+++.-|...|..
T Consensus 64 ~~~aGf~~yf~~y------stW------~~k~~iYleDlyV~e~yR~kG~Gs~Ll~~va~~A~~~G~~rv~w~vldwN~r 131 (163)
T KOG3216|consen 64 EVVAGFALYFNNY------STW------LGKQGIYLEDLYVREQYRGKGIGSKLLKFVAEEADKLGTPRVEWVVLDWNHR 131 (163)
T ss_pred CceeEEeeeeccc------ccc------cccceEEEEeeEecchhcccChHHHHHHHHHHHHHHcCCCcEEEEEeccchh
Confidence 7888988764321 112 2335699999999999999999999999999999999999999999999999
Q ss_pred hHhHHhhCCCeEeec
Q 026519 193 ATKLYKGQGFKCVKV 207 (237)
Q Consensus 193 a~~fy~k~GF~~~~~ 207 (237)
|+.||++.|++..+.
T Consensus 132 Ai~lY~k~gaq~l~~ 146 (163)
T KOG3216|consen 132 AILLYEKVGAQDLKE 146 (163)
T ss_pred HHHHHHHhCccccce
Confidence 999999999998874
No 18
>KOG3235 consensus Subunit of the major N alpha-acetyltransferase [General function prediction only]
Probab=99.66 E-value=3.5e-16 Score=110.77 Aligned_cols=151 Identities=23% Similarity=0.294 Sum_probs=112.1
Q ss_pred ceeeeccccCHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhccccccccceeeEEEEECCccceeEEeecCcccccc
Q 026519 24 IVVREARIEDIWEVAETHCSCFFPNYTFPLDLMLRVDRLVAMLSGFTVQHGTRRTCLVAVVGSRMDETFFLGSEDFKVGG 103 (237)
Q Consensus 24 l~iR~~~~~D~~~l~~l~~~~f~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~g 103 (237)
+.||.++++|+-.+..+...+.++.++-.. .+....+||. ..+||...
T Consensus 2 m~iR~ar~~DL~~mQ~~Nl~~lpENyqmky----------ylyh~lswp~----lSyVA~D~------------------ 49 (193)
T KOG3235|consen 2 MNIRRARPDDLLEMQHCNLLNLPENYQMKY----------YLYHGLSWPQ----LSYVAEDE------------------ 49 (193)
T ss_pred cccccCCHHHHHHhhhcccccCcHHHhHHH----------HHHhhccccc----ceEEEEcC------------------
Confidence 579999999999998877666666654332 1122233432 23444422
Q ss_pred cCCcccccCCceEEEEEeccccCccCCCCCccccccCCCCCeeEEEEEEecccccccChHHHHHHHHHHHHHHc-CCcEE
Q 026519 104 LDGKFSLHRGYVAGILTVDTVADFLPRKGPLRQRSSFHRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGW-GCRSI 182 (237)
Q Consensus 104 ~~~~~~~~~~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~-g~~~i 182 (237)
+|+|||++......+.. .....++|.+++|...||+.|||++||+.+.....+- +.+.+
T Consensus 50 --------~gkiVGYvlAkmee~p~------------~~~~hGhItSlaV~rs~RrlGla~kLm~qa~rAm~E~~~A~yv 109 (193)
T KOG3235|consen 50 --------NGKIVGYVLAKMEEDPD------------DEPPHGHITSLAVKRSYRRLGLAQKLMNQASRAMVEVYEAKYV 109 (193)
T ss_pred --------CCcEEEEeeeehhhccc------------CCCCCCeeEEeeehhhHHHhhHHHHHHHHHHHHHHHhhcceEE
Confidence 38899998876543111 1234689999999999999999999999998888875 88999
Q ss_pred EEEeecCCcchHhHHh-hCCCeEeecCCCCCCCCCCCCCCceeEeeeeccC
Q 026519 183 ALHCDFNNLGATKLYK-GQGFKCVKVPEGANWPQPKNSPDVKFKFMMKLLK 232 (237)
Q Consensus 183 ~l~~~~~N~~a~~fy~-k~GF~~~~~~~~~~~~~~~~~~~~~~~~m~k~L~ 232 (237)
.|+|..+|.+|+.+|. .+||++.+..+.+ |.++.+.+-|.|.|.
T Consensus 110 sLHVR~SNraAl~LY~~tl~F~v~eve~kY------YadGedAyaM~~~L~ 154 (193)
T KOG3235|consen 110 SLHVRKSNRAALHLYKNTLGFVVCEVEPKY------YADGEDAYAMRKDLS 154 (193)
T ss_pred EEeeecccHHHHHhhhhccceEEeeccccc------ccccHHHHHHHHHHH
Confidence 9999999999999999 7999999987655 455666777777663
No 19
>PRK07922 N-acetylglutamate synthase; Validated
Probab=99.65 E-value=3.3e-15 Score=112.03 Aligned_cols=124 Identities=20% Similarity=0.280 Sum_probs=86.6
Q ss_pred CCCceeeeccccCHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhccccccccceeeEEEEECCccceeEEeec-Ccc
Q 026519 21 SPEIVVREARIEDIWEVAETHCSCFFPNYTFPLDLMLRVDRLVAMLSGFTVQHGTRRTCLVAVVGSRMDETFFLGS-EDF 99 (237)
Q Consensus 21 ~~~l~iR~~~~~D~~~l~~l~~~~f~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~v~~-~~~ 99 (237)
.++++||+++++|.+.+.+|............. . ....... . ..++++. .+
T Consensus 3 ~~~i~iR~a~~~D~~~i~~L~~~~~~~~~~~~~----~---~~~~~~~-------------------~-~~~~va~~~~- 54 (169)
T PRK07922 3 AGAITVRRARTSDVPAIKRLVDPYAQGRILLEK----N---LVTLYEA-------------------V-QEFWVAEHLD- 54 (169)
T ss_pred CCCceeecCCHhhHHHHHHHHHHHhhcCccccc----h---HHHHHhh-------------------c-CcEEEEEecC-
Confidence 356899999999999999997664322111110 0 1111110 0 1122332 33
Q ss_pred cccccCCcccccCCceEEEEEeccccCccCCCCCccccccCCCCCeeEEEEEEecccccccChHHHHHHHHHHHHHHcCC
Q 026519 100 KVGGLDGKFSLHRGYVAGILTVDTVADFLPRKGPLRQRSSFHRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGC 179 (237)
Q Consensus 100 ~~~g~~~~~~~~~~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~g~ 179 (237)
++++|++.+.... ...+.|..++|+|+|||+|||+.|++++++++++.|+
T Consensus 55 -------------~~iiG~~~~~~~~-----------------~~~~~i~~l~V~p~~rgkGiG~~Ll~~~~~~a~~~g~ 104 (169)
T PRK07922 55 -------------GEVVGCGALHVMW-----------------EDLAEIRTVAVDPAARGRGVGHAIVERLLDVARELGL 104 (169)
T ss_pred -------------CcEEEEEEEeecC-----------------CCceEEEEEEECHHHhCCCHHHHHHHHHHHHHHHcCC
Confidence 7899988764321 1237788899999999999999999999999999999
Q ss_pred cEEEEEeecCCcchHhHHhhCCCeEeec
Q 026519 180 RSIALHCDFNNLGATKLYKGQGFKCVKV 207 (237)
Q Consensus 180 ~~i~l~~~~~N~~a~~fy~k~GF~~~~~ 207 (237)
..+.+.+. +.+||+|+||+.++.
T Consensus 105 ~~l~~~~~-----~~~fY~k~GF~~~~~ 127 (169)
T PRK07922 105 SRVFVLTF-----EVEFFARHGFVEIDG 127 (169)
T ss_pred CEEEEEec-----cHHHHHHCCCEECcc
Confidence 99887653 378999999999864
No 20
>PHA00673 acetyltransferase domain containing protein
Probab=99.65 E-value=4.9e-15 Score=107.34 Aligned_cols=135 Identities=15% Similarity=0.066 Sum_probs=94.3
Q ss_pred eeccccCHHHHHHHhhccCCCCCCCC-c-hhHHHHHHHHHHHhccccccccceeeEEEEECCccceeEEeecCccccccc
Q 026519 27 REARIEDIWEVAETHCSCFFPNYTFP-L-DLMLRVDRLVAMLSGFTVQHGTRRTCLVAVVGSRMDETFFLGSEDFKVGGL 104 (237)
Q Consensus 27 R~~~~~D~~~l~~l~~~~f~~~~~~~-~-~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~g~ 104 (237)
-.++.+|+++|.+|+.+.- -....+ . ........+..+. .+++..+++++.+
T Consensus 10 ~~A~~~D~paI~~LLadd~-l~~~r~d~~~~~~y~~af~ai~-------------------~dp~~~llVa~~~------ 63 (154)
T PHA00673 10 AFAELADAPTFASLCAEYA-HESANADLAGRAPDHHAYAGME-------------------AAGVAHFLGVFRG------ 63 (154)
T ss_pred hhccHhhHHHHHHHHHhcc-cccccccccccchhHHHHHHHH-------------------hCCCcEEEEEEEC------
Confidence 3578999999999987721 111111 0 1111111222322 2344556666554
Q ss_pred CCcccccCCceEEEEEeccccCccCCCCCccccccCCCCCeeEEEEEEecccccccChHHHHHHHHHHHHHHcCCcEEEE
Q 026519 105 DGKFSLHRGYVAGILTVDTVADFLPRKGPLRQRSSFHRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIAL 184 (237)
Q Consensus 105 ~~~~~~~~~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~g~~~i~l 184 (237)
+++||++.+...+... ......+.|..++|+|++||+|||++|++++++++++.|+..+++
T Consensus 64 --------g~vVG~~~l~~~p~l~-----------~~~~~~~~Ie~l~V~~~~RGqGIG~~Ll~~A~~~Ar~~Gc~~lyi 124 (154)
T PHA00673 64 --------EELVGFACLLVTPVPH-----------FKGQLIGTTESIFVAAAHRPGGAGMALLRATEALARDLGATGLYV 124 (154)
T ss_pred --------CEEEEEEEEEEecCCc-----------cCCccEEEEEEEEEChhccCCCHHHHHHHHHHHHHHHCCCCEEEE
Confidence 8899988886543211 113355889999999999999999999999999999999999999
Q ss_pred EeecCCcchHhHHhhCCCeEeec
Q 026519 185 HCDFNNLGATKLYKGQGFKCVKV 207 (237)
Q Consensus 185 ~~~~~N~~a~~fy~k~GF~~~~~ 207 (237)
+..|+ ...+.||.+.|++...+
T Consensus 125 s~~p~-~~tv~fy~~~g~~~~~~ 146 (154)
T PHA00673 125 SGPTE-GRLVQLLPAAGYRETNR 146 (154)
T ss_pred ecCCC-ccchHHHHhCCchhhch
Confidence 87665 45799999999998763
No 21
>KOG3139 consensus N-acetyltransferase [General function prediction only]
Probab=99.65 E-value=1.5e-15 Score=108.35 Aligned_cols=86 Identities=29% Similarity=0.370 Sum_probs=74.8
Q ss_pred eEEEEEeccccCccCCCCCccccccCCCCCeeEEEEEEecccccccChHHHHHHHHHHHHHHcCCcEEEEEeecCCcchH
Q 026519 115 VAGILTVDTVADFLPRKGPLRQRSSFHRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDFNNLGAT 194 (237)
Q Consensus 115 ivG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~g~~~i~l~~~~~N~~a~ 194 (237)
.||.+.+...... ....++|..++|+++|||+|||++|++.+++.++++|+..+.|+|..+|.+|.
T Consensus 68 ~VGai~ck~~~~r--------------~~~rgyi~mLaV~~e~Rg~GIg~aLvr~aId~m~~~g~~eVvLeTe~~n~~A~ 133 (165)
T KOG3139|consen 68 TVGAIVCKLDTHR--------------NTLRGYIAMLAVDSEYRGQGIGKALVRKAIDAMRSRGYSEVVLETEVTNLSAL 133 (165)
T ss_pred eEEEEEEeccccC--------------CcceEEEEEEEechhhccccHHHHHHHHHHHHHHHCCCcEEEEeccccchHHH
Confidence 6888887654222 12459999999999999999999999999999999999999999999999999
Q ss_pred hHHhhCCCeEeecCCCCCCC
Q 026519 195 KLYKGQGFKCVKVPEGANWP 214 (237)
Q Consensus 195 ~fy~k~GF~~~~~~~~~~~~ 214 (237)
++|+++||+..++...+++.
T Consensus 134 ~LY~sLGF~r~~r~~~YYln 153 (165)
T KOG3139|consen 134 RLYESLGFKRDKRLFRYYLN 153 (165)
T ss_pred HHHHhcCceEecceeEEEEC
Confidence 99999999999987766543
No 22
>COG0456 RimI Acetyltransferases [General function prediction only]
Probab=99.65 E-value=2.1e-15 Score=113.89 Aligned_cols=145 Identities=27% Similarity=0.318 Sum_probs=99.9
Q ss_pred CCCceeeeccccCHH--HHHHHhhccCCC--CCCCCchhHHHHHHHHHHHhccccccccceeeEEEEECCccceeEEeec
Q 026519 21 SPEIVVREARIEDIW--EVAETHCSCFFP--NYTFPLDLMLRVDRLVAMLSGFTVQHGTRRTCLVAVVGSRMDETFFLGS 96 (237)
Q Consensus 21 ~~~l~iR~~~~~D~~--~l~~l~~~~f~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~v~~ 96 (237)
...+.+|+++..|++ .+.++....|.. .|... .+...+... ...++++....
T Consensus 9 ~~~~~ir~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~l~~~------~~~~~v~~~~~---------- 64 (177)
T COG0456 9 EDKVTIREAINKDLLDVALAALEARTFDIRLPWSRE--------YFEKDLTQA------PELLLVAETGG---------- 64 (177)
T ss_pred ccceehhhhhhcccchHHHHHHhhhcCCCCCcchHH--------HHHHHHhhC------cceeEEEEecc----------
Confidence 346789999999999 889998888763 33321 122222210 01122222210
Q ss_pred CcccccccCCcccccCCceEEEEEeccccCccCCCCCccccccCCCCCeeEEEEEEecccccccChHHHHHHHHHHHHHH
Q 026519 97 EDFKVGGLDGKFSLHRGYVAGILTVDTVADFLPRKGPLRQRSSFHRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARG 176 (237)
Q Consensus 97 ~~~~~~g~~~~~~~~~~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~ 176 (237)
.++.. ...++|++........... ...++|..|+|+|+|||+|||++|++++++.+++
T Consensus 65 ~~~~~----------~~~~~G~~~~~~~~~~~~~------------~~~~~i~~iaV~p~~r~~Gig~~Ll~~~~~~~~~ 122 (177)
T COG0456 65 LDGLL----------DGKVVGFLLVRVVDGRPSA------------DHEGHIYNLAVDPEYRGRGIGRALLDEALERLRE 122 (177)
T ss_pred cCCCc----------ccceeEEEEEEEecCCccc------------cCccEEEEEEEChHhhcCCHHHHHHHHHHHHHHh
Confidence 01000 0257888877421111000 2258999999999999999999999999999999
Q ss_pred cCC-cEEEEEeecCCcchHhHHhhCCCeEeecCCCC
Q 026519 177 WGC-RSIALHCDFNNLGATKLYKGQGFKCVKVPEGA 211 (237)
Q Consensus 177 ~g~-~~i~l~~~~~N~~a~~fy~k~GF~~~~~~~~~ 211 (237)
.+. ..+.|.|..+|.+|+.||+|+||+.+++.+.+
T Consensus 123 ~~~~~~~~L~V~~~N~~Ai~lY~~~GF~~~~~~~~y 158 (177)
T COG0456 123 RGLADKIVLEVRESNEAAIGLYRKLGFEVVKIRKNY 158 (177)
T ss_pred cCCCceEEEEEecCChHHHHHHHHcCCEEEeeehhh
Confidence 886 89999999999999999999999999987754
No 23
>PRK10514 putative acetyltransferase; Provisional
Probab=99.64 E-value=6.7e-15 Score=107.56 Aligned_cols=72 Identities=19% Similarity=0.259 Sum_probs=60.4
Q ss_pred CceEEEEEeccccCccCCCCCccccccCCCCCeeEEEEEEecccccccChHHHHHHHHHHHHHHcCCcEEEEEeecCCcc
Q 026519 113 GYVAGILTVDTVADFLPRKGPLRQRSSFHRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDFNNLG 192 (237)
Q Consensus 113 ~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~g~~~i~l~~~~~N~~ 192 (237)
+++||++.+.. .++..++|+|+|||+|||+.|++.+++.+ +.+.+.+...|..
T Consensus 59 ~~~iG~~~~~~----------------------~~~~~~~v~p~~rgkGig~~Ll~~~~~~~-----~~i~~~v~~~N~~ 111 (145)
T PRK10514 59 DQPVGFMLLSG----------------------GHMEALFVDPDVRGCGVGRMLVEHALSLH-----PELTTDVNEQNEQ 111 (145)
T ss_pred CcEEEEEEEec----------------------CcEeEEEECHHhccCCHHHHHHHHHHHhc-----cccEEEeecCCHH
Confidence 78999888742 23557899999999999999999999864 3567889999999
Q ss_pred hHhHHhhCCCeEeecCCCC
Q 026519 193 ATKLYKGQGFKCVKVPEGA 211 (237)
Q Consensus 193 a~~fy~k~GF~~~~~~~~~ 211 (237)
|++||+|+||+..++....
T Consensus 112 a~~~yek~Gf~~~~~~~~~ 130 (145)
T PRK10514 112 AVGFYKKMGFKVTGRSEVD 130 (145)
T ss_pred HHHHHHHCCCEEecccccC
Confidence 9999999999999876543
No 24
>PF00583 Acetyltransf_1: Acetyltransferase (GNAT) family; InterPro: IPR000182 The N-acetyltransferases (NAT) (EC 2.3.1.-) are enzymes that use acetyl coenzyme A (CoA) to transfer an acetyl group to a substrate, a reaction implicated in various functions from bacterial antibiotic resistance to mammalian circadian rhythm and chromatin remodeling. The Gcn5-related N-acetyltransferases (GNAT) catalyze the transfer of the acetyl from the CoA donor to a primary amine of the acceptor. The GNAT proteins share a domain composed of four conserved sequence motifs A-D [, ]. This GNAT domain is named after yeast GCN5 (from General Control Nonrepressed) and related histone acetyltransferases (HATs) like Hat1 and PCAF. HATs acetylate lysine residues of amino terminal histone tails, resulting in transcription activation. Another category of GNAT, the aminoglycoside N-acetyltransferases, confer antibiotic resistance by catalyzing the acetylation of amino groups in aminoglycoside antibiotics []. GNAT proteins can also have anabolic and catabolic functions in both prokaryotes and eukaryotes [, , , , ]. The acetyltransferase/GNAT domain forms a structurally conserved fold of 6 to 7 beta strands (B) and 4 helices (H) in the topology B1-H1-H2-B2-B3-B4-H3-B5-H4-B6, followed by a C-terminal strand which may be from the same monomer or contributed by another [, ]. Motifs D (B2-B3), A (B4-H3) and B (B5-H4) are collectively called the HAT core [, , ], while the N-terminal motif C (B1-H1) is less conserved. Some proteins known to contain a GNAT domain: Yeast GCN5 and Hat1, which are histone acetyltransferases (EC 2.3.1.48). Human PCAF, a histone acetyltransferase. Mammalian serotonin N-acetyltransferase (SNAT) or arylalkylamine NAT (AANAT), which acetylates serotonin into a circadian neurohormone that may participate in light-dark rhythms, and human mood and behavior. Mammalian glucosamine 6-phosphate N-acetyltransferase (GNA1) (EC 2.3.1.4). Escherichia coli rimI and rimJ, which acetylate the N-terminal alanine of ribosomal proteins S18 and S5, respectively (EC 2.3.1.128). Mycobacterium tuberculosis aminoglycoside 2'-N-acetyltransferase (aac), which acetylates the 2' hydroxyl or amino group of a broad spectrum of aminoglycoside antibiotics. Bacillus subtilis bltD and paiA, which acetylate spermine and spermidine. This entry represents the entire GNAT domain.; GO: 0008080 N-acetyltransferase activity, 0008152 metabolic process; PDB: 3T9Y_A 2R7H_B 2OZH_A 1Y9W_B 1VKC_B 2OH1_C 3R9E_B 3R9G_B 3R9F_A 3R96_A ....
Probab=99.64 E-value=1.7e-15 Score=99.90 Aligned_cols=80 Identities=29% Similarity=0.494 Sum_probs=70.8
Q ss_pred CCceEEEEEeccccCccCCCCCccccccCCCCCeeEEEEEEecccccccChHHHHHHHHHHHHHHcCCcEEEEEeecCCc
Q 026519 112 RGYVAGILTVDTVADFLPRKGPLRQRSSFHRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDFNNL 191 (237)
Q Consensus 112 ~~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~g~~~i~l~~~~~N~ 191 (237)
++++||++.+....... +..+.++|..++|+|+|||+|||+.|++++++.+++.|+..+.+.+.++|.
T Consensus 4 ~~~ivg~~~~~~~~~~~------------~~~~~~~i~~~~v~~~~r~~Gig~~L~~~~~~~~~~~g~~~i~~~~~~~n~ 71 (83)
T PF00583_consen 4 DGQIVGFASLRPPPEPF------------DHGNHAYIHRLAVDPEYRGQGIGSKLLQAAEEWARKRGIKRIYLDVSPDNP 71 (83)
T ss_dssp TTEEEEEEEEEEEETTT------------TTTTEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHTTESEEEEEEETTGH
T ss_pred CCEEEEEEEEEECCCcc------------ccCCEEEEEEEEEcHHHhhCCCchhhhhhhhhhHHhcCccEEEEEEeCCCH
Confidence 58999999987543221 014679999999999999999999999999999999999999999999999
Q ss_pred chHhHHhhCCCe
Q 026519 192 GATKLYKGQGFK 203 (237)
Q Consensus 192 ~a~~fy~k~GF~ 203 (237)
.+.+||+|+||+
T Consensus 72 ~~~~~~~k~Gf~ 83 (83)
T PF00583_consen 72 AARRFYEKLGFE 83 (83)
T ss_dssp HHHHHHHHTTEE
T ss_pred HHHHHHHHcCCC
Confidence 999999999996
No 25
>PRK15130 spermidine N1-acetyltransferase; Provisional
Probab=99.63 E-value=2.1e-15 Score=115.00 Aligned_cols=102 Identities=16% Similarity=0.175 Sum_probs=79.8
Q ss_pred CceEEEEEeccccCccCCCCCccccccCCCCCeeEEEEEEecccccccChHHHHHHHHHHHHHH-cCCcEEEEEeecCCc
Q 026519 113 GYVAGILTVDTVADFLPRKGPLRQRSSFHRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARG-WGCRSIALHCDFNNL 191 (237)
Q Consensus 113 ~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~-~g~~~i~l~~~~~N~ 191 (237)
+++||++.+..... ....+.+. ++|+|+|||+|+|+.+++.+++++.+ .|++.+.+.+...|.
T Consensus 66 g~~iG~~~~~~~~~---------------~~~~~~~~-~~v~~~~~g~G~g~~l~~~l~~~~~~~~~~~rv~~~v~~~N~ 129 (186)
T PRK15130 66 GEKAGLVELVEINH---------------VHRRAEFQ-IIISPEYQGKGLATRAAKLAMDYGFTVLNLYKLYLIVDKENE 129 (186)
T ss_pred CEEEEEEEEEeecC---------------CCCeEEEE-EEECHHHcCCCHHHHHHHHHHHHHhhcCCceEEEEEEccCCH
Confidence 78999998753211 11124454 89999999999999999999999986 599999999999999
Q ss_pred chHhHHhhCCCeEeecCCCCCCCCCCCCCCceeEeeeec
Q 026519 192 GATKLYKGQGFKCVKVPEGANWPQPKNSPDVKFKFMMKL 230 (237)
Q Consensus 192 ~a~~fy~k~GF~~~~~~~~~~~~~~~~~~~~~~~~m~k~ 230 (237)
+|++||+|+||+.++..+......+.+.|...+.+...+
T Consensus 130 ~s~~~yek~GF~~~~~~~~~~~~~g~~~d~~~~~~~~~~ 168 (186)
T PRK15130 130 KAIHIYRKLGFEVEGELIHEFFINGEYRNTIRMCIFQHQ 168 (186)
T ss_pred HHHHHHHHCCCEEEEEEeheEEECCEEEEEEEEEeeHHH
Confidence 999999999999999888765555565665455444433
No 26
>PRK07757 acetyltransferase; Provisional
Probab=99.63 E-value=8.2e-15 Score=108.01 Aligned_cols=124 Identities=22% Similarity=0.383 Sum_probs=86.6
Q ss_pred CceeeeccccCHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhccccccccceeeEEEEECCccceeEEeecCccccc
Q 026519 23 EIVVREARIEDIWEVAETHCSCFFPNYTFPLDLMLRVDRLVAMLSGFTVQHGTRRTCLVAVVGSRMDETFFLGSEDFKVG 102 (237)
Q Consensus 23 ~l~iR~~~~~D~~~l~~l~~~~f~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~ 102 (237)
++.||+++++|++.+.++........+...... +.+.... ..+++...
T Consensus 1 ~~~ir~~~~~D~~~l~~l~~~~~~~~~~~~~~~----~~~~~~~-----------------------~~~~i~~~----- 48 (152)
T PRK07757 1 MMEIRKARLSDVKAIHALINVYAKKGLMLPRSL----DELYENI-----------------------RDFYVAEE----- 48 (152)
T ss_pred CceEeeCCcccHHHHHHHHHHHHhcCCccCCCH----HHHHhcc-----------------------CcEEEEEE-----
Confidence 368999999999999999876543332211111 1111100 01222222
Q ss_pred ccCCcccccCCceEEEEEeccccCccCCCCCccccccCCCCCeeEEEEEEecccccccChHHHHHHHHHHHHHHcCCcEE
Q 026519 103 GLDGKFSLHRGYVAGILTVDTVADFLPRKGPLRQRSSFHRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSI 182 (237)
Q Consensus 103 g~~~~~~~~~~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~g~~~i 182 (237)
+++++|++.+... ..+..+|..++|+|+|||+|+|+.|++.+++.+++.|+..+
T Consensus 49 ---------~~~lvG~~~l~~~-----------------~~~~~~i~~v~V~p~~rg~Glg~~Ll~~l~~~a~~~g~~~i 102 (152)
T PRK07757 49 ---------EGEIVGCCALHIL-----------------WEDLAEIRSLAVSEDYRGQGIGRMLVEACLEEARELGVKRV 102 (152)
T ss_pred ---------CCEEEEEEEEEec-----------------cCCceEEEEEEECHHHcCCCHHHHHHHHHHHHHHhCCCCeE
Confidence 2789999987532 12336788899999999999999999999999998899887
Q ss_pred EEEeecCCcchHhHHhhCCCeEeecCC
Q 026519 183 ALHCDFNNLGATKLYKGQGFKCVKVPE 209 (237)
Q Consensus 183 ~l~~~~~N~~a~~fy~k~GF~~~~~~~ 209 (237)
.+.+. +.+||+|+||+..+...
T Consensus 103 ~~~~~-----~~~~Y~k~GF~~~~~~~ 124 (152)
T PRK07757 103 FALTY-----QPEFFEKLGFREVDKEA 124 (152)
T ss_pred EEEeC-----cHHHHHHCCCEEccccc
Confidence 66542 46899999999997643
No 27
>PF13527 Acetyltransf_9: Acetyltransferase (GNAT) domain; PDB: 3SXN_C 2I00_D 1M4D_B 1M44_A 1M4G_B 1M4I_A 2OZG_A 2HV2_F 3N7Z_A 3RYO_B ....
Probab=99.61 E-value=7.4e-15 Score=104.90 Aligned_cols=127 Identities=20% Similarity=0.299 Sum_probs=83.0
Q ss_pred eeeeccccCHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhccccccccceeeEEEEECCccceeEEeecCccccccc
Q 026519 25 VVREARIEDIWEVAETHCSCFFPNYTFPLDLMLRVDRLVAMLSGFTVQHGTRRTCLVAVVGSRMDETFFLGSEDFKVGGL 104 (237)
Q Consensus 25 ~iR~~~~~D~~~l~~l~~~~f~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~g~ 104 (237)
+||+++++|.+++.+|++.+|....... ........... ....+++.++
T Consensus 1 ~iR~~~~~d~~~i~~l~~~~F~~~~~~~----~~~~~~~~~~~---------------------~~~~~~~~~~------ 49 (127)
T PF13527_consen 1 EIRPLTESDFEQIIELFNEAFGDSESPP----EIWEYFRNLYG---------------------PGRCVVAEDD------ 49 (127)
T ss_dssp -EEEE-GGGHHHHHHHHHHHTTT-CHHH----HHHHHHHHHHH---------------------TTEEEEEEET------
T ss_pred CceECCHHHHHHHHHHHHHHCCCCCCch----hhhhhhhcccC---------------------cCcEEEEEEC------
Confidence 4899999999999999999986653221 01111111111 1122333333
Q ss_pred CCcccccCCceEEEEEeccccCccCCCCCccccccCCCCCeeEEEEEEecccccccChHHHHHHHHHHHHHHcCCcEEEE
Q 026519 105 DGKFSLHRGYVAGILTVDTVADFLPRKGPLRQRSSFHRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIAL 184 (237)
Q Consensus 105 ~~~~~~~~~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~g~~~i~l 184 (237)
+++||.+.+....-.. .+ ..-+..++..++|+|+|||+|+|++|++++++.+++.|+..+.+
T Consensus 50 --------~~ivg~~~~~~~~~~~--~g--------~~~~~~~i~~v~v~p~~R~~Gl~~~L~~~~~~~~~~~g~~~~~l 111 (127)
T PF13527_consen 50 --------GKIVGHVGLIPRRLSV--GG--------KKFKAAYIGDVAVDPEYRGRGLGRQLMRALLERARERGVPFIFL 111 (127)
T ss_dssp --------TEEEEEEEEEEEEEEE--TT--------EEEEEEEEEEEEE-GGGTTSSHHHHHHHHHHHHHHHTT-SEEEE
T ss_pred --------CEEEEEEEEEEEEEEE--CC--------EEEEEEEEEEEEECHHHcCCCHHHHHHHHHHHHHHhCCCCEEEE
Confidence 7888888875321110 00 01235889999999999999999999999999999999988777
Q ss_pred EeecCCcchHhHHhhCCCeEe
Q 026519 185 HCDFNNLGATKLYKGQGFKCV 205 (237)
Q Consensus 185 ~~~~~N~~a~~fy~k~GF~~~ 205 (237)
.. ...+||+++||+.+
T Consensus 112 ~~-----~~~~~Y~~~G~~~~ 127 (127)
T PF13527_consen 112 FP-----SSPPFYRRFGFEYA 127 (127)
T ss_dssp E------SSHHHHHHTTEEEE
T ss_pred ec-----CChhhhhcCCCEEC
Confidence 54 34789999999864
No 28
>TIGR01575 rimI ribosomal-protein-alanine acetyltransferase. Members of this model belong to the GCN5-related N-acetyltransferase (GNAT) superfamily. This model covers prokarotes and the archaea. The seed contains a characterized accession for Gram negative E. coli. An untraceable characterized accession (PIR|S66013) for Gram positive B. subtilis scores well (205.0) in the full alignment. Characterized members are lacking in the archaea. Noise cutoff (72.4) was set to exclude M. loti paralog of rimI. Trusted cutoff (80.0) was set at next highest scoring member in the mini-database.
Probab=99.61 E-value=2.2e-14 Score=102.67 Aligned_cols=81 Identities=31% Similarity=0.489 Sum_probs=71.4
Q ss_pred CceEEEEEeccccCccCCCCCccccccCCCCCeeEEEEEEecccccccChHHHHHHHHHHHHHHcCCcEEEEEeecCCcc
Q 026519 113 GYVAGILTVDTVADFLPRKGPLRQRSSFHRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDFNNLG 192 (237)
Q Consensus 113 ~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~g~~~i~l~~~~~N~~ 192 (237)
+++||++.+... ....++..++|+|+|||+|+|+.|++++++++++.++..+.+.+.+.|..
T Consensus 40 ~~~vg~~~~~~~------------------~~~~~i~~~~v~~~~rg~G~g~~ll~~~~~~~~~~~~~~i~~~~~~~n~~ 101 (131)
T TIGR01575 40 GKVVGYAGVQIV------------------LDEAHILNIAVKPEYQGQGIGRALLRELIDEAKGRGVNEIFLEVRVSNIA 101 (131)
T ss_pred CeEEEEEEEEec------------------CCCeEEEEEEECHHHcCCCHHHHHHHHHHHHHHHcCCCeEEEEEecccHH
Confidence 788998886432 12367888999999999999999999999999998999999999999999
Q ss_pred hHhHHhhCCCeEeecCCCC
Q 026519 193 ATKLYKGQGFKCVKVPEGA 211 (237)
Q Consensus 193 a~~fy~k~GF~~~~~~~~~ 211 (237)
+++||+|+||+.++..+.+
T Consensus 102 ~~~~y~~~Gf~~~~~~~~~ 120 (131)
T TIGR01575 102 AQALYKKLGFNEIAIRRNY 120 (131)
T ss_pred HHHHHHHcCCCcccccccc
Confidence 9999999999999987654
No 29
>TIGR03103 trio_acet_GNAT GNAT-family acetyltransferase TIGR03103. Members of this protein family belong to the GNAT family of acetyltransferases. Each is part of a conserved three-gene cassette sparsely distributed across at least twenty different species known so far, including alpha, beta, and gamma Proteobacteria, Mycobacterium, and Prosthecochloris, which is a member of the Chlorobi. The other two members of the cassette are a probable protease and an asparagine synthetase family protein.
Probab=99.60 E-value=1.9e-14 Score=125.98 Aligned_cols=136 Identities=15% Similarity=0.191 Sum_probs=95.2
Q ss_pred CCceeeec-cccCHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhccccccccceeeEEEEECCccceeEEeecCccc
Q 026519 22 PEIVVREA-RIEDIWEVAETHCSCFFPNYTFPLDLMLRVDRLVAMLSGFTVQHGTRRTCLVAVVGSRMDETFFLGSEDFK 100 (237)
Q Consensus 22 ~~l~iR~~-~~~D~~~l~~l~~~~f~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~v~~~~~~ 100 (237)
+.+.||++ +++|+++|.+|+..+....+... . +...+. .....++++..+
T Consensus 81 ~g~~IR~~~~~~D~~~I~~L~~~~~~~p~~~~----~----~~~~~~-------------------~~~~~~~vA~~~-- 131 (547)
T TIGR03103 81 RGFTVRRLRGPADVDAINRLYAARGMVPVRVD----F----VLDHRH-------------------SRAITYLVAEDE-- 131 (547)
T ss_pred CCcEEEeCCChhHHHHHHHHHHhcCCCCCCHH----H----HHHHhc-------------------CCCceEEEEEEC--
Confidence 56899997 68999999999988643222111 1 111110 111223333210
Q ss_pred ccccCCcccccCCceEEEEEeccccCccCCCCCccccccCCCCCeeEEEEEEecccccccChHHHHHHHHHHHHHHcCCc
Q 026519 101 VGGLDGKFSLHRGYVAGILTVDTVADFLPRKGPLRQRSSFHRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCR 180 (237)
Q Consensus 101 ~~g~~~~~~~~~~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~g~~ 180 (237)
.++++||++.......... ......+|..|+|+|+|||+|||+.|++.+++++++.|+.
T Consensus 132 ----------~~g~IVG~~~~~~~~~~~~-----------d~~~~~~i~~l~V~P~~Rg~GIG~~Ll~~l~e~a~~~G~~ 190 (547)
T TIGR03103 132 ----------ASGAIIGTVMGVDHRKAFN-----------DPEHGSSLWCLAVDPQAAHPGVGEALVRALAEHFQSRGCA 190 (547)
T ss_pred ----------CCCeEEEEEEEEecccccc-----------CCCCCeEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCC
Confidence 1378999886532111000 0122367889999999999999999999999999999999
Q ss_pred EEEEEeecCCcchHhHHhhCCCeEeec
Q 026519 181 SIALHCDFNNLGATKLYKGQGFKCVKV 207 (237)
Q Consensus 181 ~i~l~~~~~N~~a~~fy~k~GF~~~~~ 207 (237)
.+.|.|..+|.+|++||+|+||+.+..
T Consensus 191 ~i~L~V~~~N~~Ai~fY~klGf~~~~~ 217 (547)
T TIGR03103 191 YMDLSVMHDNEQAIALYEKLGFRRIPV 217 (547)
T ss_pred EEEEEEcCCCHHHHHHHHHCCCEEeeE
Confidence 999999999999999999999998864
No 30
>PRK09831 putative acyltransferase; Provisional
Probab=99.59 E-value=1.1e-14 Score=106.83 Aligned_cols=127 Identities=16% Similarity=0.217 Sum_probs=82.3
Q ss_pred ceeeeccccCHHHHHHHhhccCCCCCCCCchhHHHHHHHHHH-HhccccccccceeeEEEEECCccceeEEeecCccccc
Q 026519 24 IVVREARIEDIWEVAETHCSCFFPNYTFPLDLMLRVDRLVAM-LSGFTVQHGTRRTCLVAVVGSRMDETFFLGSEDFKVG 102 (237)
Q Consensus 24 l~iR~~~~~D~~~l~~l~~~~f~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~ 102 (237)
+.||+++++|++.+.++....+........+.. ....+... ...+.. ......++++..+
T Consensus 1 ~~ir~a~~~D~~~l~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~--------------~~~~~~~~v~~~~---- 61 (147)
T PRK09831 1 IQIRNYQPGDFQQLCAIFIRAVTMTASQHYSPQ-QIAAWAQIDESRWKE--------------KLAKSQVRVAVIN---- 61 (147)
T ss_pred CccccCChhhHHHHHHHHHHHHHHhhhhcCCHH-HHHhccCCCHHHHHH--------------HHhcCceEEEEEC----
Confidence 369999999999999998877533222111111 11111000 000000 0001223444433
Q ss_pred ccCCcccccCCceEEEEEeccccCccCCCCCccccccCCCCCeeEEEEEEecccccccChHHHHHHHHHHHHHHcCCcEE
Q 026519 103 GLDGKFSLHRGYVAGILTVDTVADFLPRKGPLRQRSSFHRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSI 182 (237)
Q Consensus 103 g~~~~~~~~~~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~g~~~i 182 (237)
++++|++.+.. .++..++|+|++||+|||+.|++++++.+++
T Consensus 62 ----------~~iiG~~~~~~----------------------~~i~~~~v~p~~~g~GiG~~Ll~~~~~~~~~------ 103 (147)
T PRK09831 62 ----------AQPVGFITCIE----------------------HYIDMLFVDPEYTRRGVASALLKPLIKSESE------ 103 (147)
T ss_pred ----------CEEEEEEEehh----------------------ceeeeEEECHHHcCCCHHHHHHHHHHHHhhh------
Confidence 88999887632 3577899999999999999999999998875
Q ss_pred EEEeecCCcchHhHHhhCCCeEeecCC
Q 026519 183 ALHCDFNNLGATKLYKGQGFKCVKVPE 209 (237)
Q Consensus 183 ~l~~~~~N~~a~~fy~k~GF~~~~~~~ 209 (237)
+.+.. |..+++||+|+||+.++..+
T Consensus 104 -l~v~~-~~~a~~~Y~k~Gf~~~g~~~ 128 (147)
T PRK09831 104 -LTVDA-SITAKPFFERYGFQTVKQQR 128 (147)
T ss_pred -eEeec-chhhHHHHHHCCCEEeeccc
Confidence 23333 46799999999999999866
No 31
>PRK05279 N-acetylglutamate synthase; Validated
Probab=99.59 E-value=9.2e-15 Score=125.57 Aligned_cols=99 Identities=19% Similarity=0.294 Sum_probs=75.0
Q ss_pred CceEEEEEeccccCccCCCCCccccccCCCCCeeEEEEEEecccccccChHHHHHHHHHHHHHHcCCcEEEEEeecCCcc
Q 026519 113 GYVAGILTVDTVADFLPRKGPLRQRSSFHRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDFNNLG 192 (237)
Q Consensus 113 ~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~g~~~i~l~~~~~N~~ 192 (237)
++++|++.+.... ....++|..++|+|+|||+|+|++|++++++++++.|+..+.+.+ ..
T Consensus 343 g~iVG~~~~~~~~----------------~~~~~~I~~l~V~p~~Rg~GiG~~Ll~~l~~~a~~~g~~~l~l~~----~~ 402 (441)
T PRK05279 343 GLIIGCAALYPFP----------------EEKMGEMACLAVHPDYRGSGRGERLLKRIEQRARQLGLKRLFVLT----TR 402 (441)
T ss_pred CEEEEEEEEEEcC----------------CCCeEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHcCCCEEEEec----ch
Confidence 7899988764321 123478999999999999999999999999999999998876643 46
Q ss_pred hHhHHhhCCCeEeecCCCCCCCCCCCCCCceeEeeeecc
Q 026519 193 ATKLYKGQGFKCVKVPEGANWPQPKNSPDVKFKFMMKLL 231 (237)
Q Consensus 193 a~~fy~k~GF~~~~~~~~~~~~~~~~~~~~~~~~m~k~L 231 (237)
+.+||+|+||+.++......-....|+.+....++.|.|
T Consensus 403 a~~fY~k~GF~~~g~~~~~~~~~~~y~~~r~~~~~~~~~ 441 (441)
T PRK05279 403 TAHWFLERGFVPVDVDDLPEAKRQLYNYQRRSKVLVKDL 441 (441)
T ss_pred HHHHHHHCcCEECChhhCcHHHHHhhCcccCceeeeecC
Confidence 899999999999987544432333455555666666654
No 32
>TIGR01890 N-Ac-Glu-synth amino-acid N-acetyltransferase. This model represents a clade of amino-acid N-acetyltransferases acting mainly on glutamate in the first step of the "acetylated" ornithine biosynthesis pathway. For this reason it is also called N-acetylglutamate synthase. The enzyme may also act on aspartate.
Probab=99.59 E-value=9.6e-15 Score=124.92 Aligned_cols=147 Identities=20% Similarity=0.218 Sum_probs=97.1
Q ss_pred ceeeeccccCHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhccccccccceeeEEEEECCccceeEEeecCcccccc
Q 026519 24 IVVREARIEDIWEVAETHCSCFFPNYTFPLDLMLRVDRLVAMLSGFTVQHGTRRTCLVAVVGSRMDETFFLGSEDFKVGG 103 (237)
Q Consensus 24 l~iR~~~~~D~~~l~~l~~~~f~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~g 103 (237)
+.||+++++|++++.+|.+......|.... ..+.+... ...+++.+.+
T Consensus 283 ~~IR~at~~Dl~~I~~L~~~~~~~~~~~~~----~~~~l~~~-----------------------~~~~~V~~~d----- 330 (429)
T TIGR01890 283 ESIRQATIDDIGGIAALIRPLEEQGILVRR----SREYLERE-----------------------ISEFSIIEHD----- 330 (429)
T ss_pred hheEECCHHHHHHHHHHHHHHHHcCCchhh----hHHHHHhh-----------------------cCcEEEEEEC-----
Confidence 479999999999999997654433332111 01111100 0112333333
Q ss_pred cCCcccccCCceEEEEEeccccCccCCCCCccccccCCCCCeeEEEEEEecccccccChHHHHHHHHHHHHHHcCCcEEE
Q 026519 104 LDGKFSLHRGYVAGILTVDTVADFLPRKGPLRQRSSFHRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIA 183 (237)
Q Consensus 104 ~~~~~~~~~~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~g~~~i~ 183 (237)
++++|++.+.... ....++|..++|+|+|||+|+|++||++++++++++|++.+.
T Consensus 331 ---------g~iVG~~~~~~~~----------------~~~~~~I~~l~V~p~~Rg~GiG~~Ll~~l~~~A~~~G~~~l~ 385 (429)
T TIGR01890 331 ---------GNIIGCAALYPYA----------------EEDCGEMACLAVSPEYQDGGRGERLLAHIEDRARQMGISRLF 385 (429)
T ss_pred ---------CEEEEEEEEEecC----------------CCCeEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHcCCCEEE
Confidence 7899998875421 123478999999999999999999999999999999998875
Q ss_pred EEeecCCcchHhHHhhCCCeEeecCCCCCCCCCCCCCCceeEeeeecc
Q 026519 184 LHCDFNNLGATKLYKGQGFKCVKVPEGANWPQPKNSPDVKFKFMMKLL 231 (237)
Q Consensus 184 l~~~~~N~~a~~fy~k~GF~~~~~~~~~~~~~~~~~~~~~~~~m~k~L 231 (237)
+. .+| +.+||+|+||+.+++.....-....+..+....++.|.|
T Consensus 386 v~--~~~--a~~fY~k~GF~~~g~~~l~~~~~~~~~~~r~~~~~~~~~ 429 (429)
T TIGR01890 386 VL--TTR--TGHWFRERGFQTASVDELPEARRKLYNYQRNSKILMKRL 429 (429)
T ss_pred Ee--ecc--hHHHHHHCCCEECChhhCCHHHHHHhcccccCceeeecC
Confidence 53 333 579999999999987544332223344444445555543
No 33
>COG1246 ArgA N-acetylglutamate synthase and related acetyltransferases [Amino acid transport and metabolism]
Probab=99.57 E-value=5e-14 Score=100.68 Aligned_cols=123 Identities=22% Similarity=0.340 Sum_probs=91.2
Q ss_pred eeeeccccCHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhccccccccceeeEEEEECCccceeEEeecCccccccc
Q 026519 25 VVREARIEDIWEVAETHCSCFFPNYTFPLDLMLRVDRLVAMLSGFTVQHGTRRTCLVAVVGSRMDETFFLGSEDFKVGGL 104 (237)
Q Consensus 25 ~iR~~~~~D~~~l~~l~~~~f~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~g~ 104 (237)
.||.++.+|++.|.+|+.......-.-. .-.+.+.... ..|.+.+.+
T Consensus 2 ~iR~A~~~Di~~I~~Li~~~~~~gil~~----rs~~~le~~i-----------------------~dF~i~E~~------ 48 (153)
T COG1246 2 QIRKARISDIPAILELIRPLELQGILLR----RSREQLEEEI-----------------------DDFTIIERD------ 48 (153)
T ss_pred ceeeccccchHHHHHHHHHHhhccccch----hhHHHHHHHH-----------------------hhheeeeeC------
Confidence 6999999999999999776643221111 0111122212 122333333
Q ss_pred CCcccccCCceEEEEEeccccCccCCCCCccccccCCCCCeeEEEEEEecccccccChHHHHHHHHHHHHHHcCCcEEEE
Q 026519 105 DGKFSLHRGYVAGILTVDTVADFLPRKGPLRQRSSFHRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIAL 184 (237)
Q Consensus 105 ~~~~~~~~~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~g~~~i~l 184 (237)
|.++|++.+... ...+.++|..++|+|+|||+|+|..|++.++..|++.|++.+++
T Consensus 49 --------g~viGC~aL~~~----------------~~~~~gE~~~laV~pd~r~~G~G~~Ll~~~~~~Ar~~gi~~lf~ 104 (153)
T COG1246 49 --------GKVIGCAALHPV----------------LEEDLGELRSLAVHPDYRGSGRGERLLERLLADARELGIKELFV 104 (153)
T ss_pred --------CcEEEEEeeccc----------------CccCeeeEEEEEECHHhcCCCcHHHHHHHHHHHHHHcCCceeee
Confidence 899999998631 24556999999999999999999999999999999999999988
Q ss_pred EeecCCcchHhHHhhCCCeEeecC
Q 026519 185 HCDFNNLGATKLYKGQGFKCVKVP 208 (237)
Q Consensus 185 ~~~~~N~~a~~fy~k~GF~~~~~~ 208 (237)
-+. .+..|++++||+.+...
T Consensus 105 LTt----~~~~~F~~~GF~~vd~~ 124 (153)
T COG1246 105 LTT----RSPEFFAERGFTRVDKD 124 (153)
T ss_pred eec----ccHHHHHHcCCeECccc
Confidence 764 46889999999999763
No 34
>PF13302 Acetyltransf_3: Acetyltransferase (GNAT) domain; PDB: 3TTH_C 3JUW_A 2ZXV_A 2Z0Z_A 2VI7_B 3EG7_F 1YRE_C 3IGR_B 3FBU_A 2FCK_A ....
Probab=99.57 E-value=1.5e-13 Score=99.83 Aligned_cols=137 Identities=17% Similarity=0.167 Sum_probs=89.9
Q ss_pred CceeeeccccCHHHHHHHhhccCCCCC---CCC-chhHHHHHHHHHHHhccccccccceeeEEEEECCccceeEEeecCc
Q 026519 23 EIVVREARIEDIWEVAETHCSCFFPNY---TFP-LDLMLRVDRLVAMLSGFTVQHGTRRTCLVAVVGSRMDETFFLGSED 98 (237)
Q Consensus 23 ~l~iR~~~~~D~~~l~~l~~~~f~~~~---~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~v~~~~ 98 (237)
.+.||+++++|++.+.++....-...| ... .+.....+.+......+... ....+.+...+
T Consensus 1 Rl~lr~~~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~i~~~~ 65 (142)
T PF13302_consen 1 RLTLRPLTPEDADAIYEWRSDPEIRRYLPWGPPWPTLEEAEEWIQSRQDSWENH---------------GYYYFAIEDKD 65 (142)
T ss_dssp SEEEEE-HGGGHHHHHHHHTTTTHCTTSSTTTSSSSHHHHHHHHHHHHHCHHEE---------------TEEEEEEEETT
T ss_pred CEEEEcCCHHHHHHHHHHhcCHHHHHhcCCCCCCCCHHHHHHHHHHhhhhhhcc---------------cceEEEEEecc
Confidence 478999999999999999853322233 111 12233333332211111100 01222333222
Q ss_pred ccccccCCcccccCCceEEEEEeccccCccCCCCCccccccCCCCCeeEEEEEEecccccccChHHHHHHHHHHHHH-Hc
Q 026519 99 FKVGGLDGKFSLHRGYVAGILTVDTVADFLPRKGPLRQRSSFHRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQAR-GW 177 (237)
Q Consensus 99 ~~~~g~~~~~~~~~~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~-~~ 177 (237)
++++||++.+..... ..+.++++ +.|.|+|||+|+|+.++..+++++. +.
T Consensus 66 -------------~~~~iG~i~~~~~~~---------------~~~~~eig-~~i~~~~~g~G~~~~~~~~~~~~~~~~~ 116 (142)
T PF13302_consen 66 -------------DGEIIGFIGLYNIDK---------------NNNWAEIG-YWIGPDYRGKGYGTEALKLLLDWAFEEL 116 (142)
T ss_dssp -------------TTEEEEEEEEEEEET---------------TTTEEEEE-EEEEGGGTTSSHHHHHHHHHHHHHHHTS
T ss_pred -------------CCceEEEeeeeeccc---------------CCCccccc-cchhHHHHhhhHHHHHHHHHHHHHHhcC
Confidence 367999998832211 23457777 8999999999999999999999996 56
Q ss_pred CCcEEEEEeecCCcchHhHHhhCCCe
Q 026519 178 GCRSIALHCDFNNLGATKLYKGQGFK 203 (237)
Q Consensus 178 g~~~i~l~~~~~N~~a~~fy~k~GF~ 203 (237)
|+..+.+.+.++|.+|.++++|+||+
T Consensus 117 ~~~~i~a~~~~~N~~s~~~~~k~GF~ 142 (142)
T PF13302_consen 117 GLHRIIATVMADNEASRRLLEKLGFE 142 (142)
T ss_dssp TSSEEEEEEETT-HHHHHHHHHTT-E
T ss_pred CcEEEEEEECcCCHHHHHHHHHcCCC
Confidence 99999999999999999999999996
No 35
>PRK10562 putative acetyltransferase; Provisional
Probab=99.57 E-value=1.3e-13 Score=100.86 Aligned_cols=70 Identities=26% Similarity=0.430 Sum_probs=59.0
Q ss_pred CceEEEEEeccccCccCCCCCccccccCCCCCeeEEEEEEecccccccChHHHHHHHHHHHHHHcCCcEEEEEeecCCcc
Q 026519 113 GYVAGILTVDTVADFLPRKGPLRQRSSFHRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDFNNLG 192 (237)
Q Consensus 113 ~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~g~~~i~l~~~~~N~~ 192 (237)
+++||++.+... ..+..++|+|+|||+|+|+.|++++++. +..+.+.+..+|+.
T Consensus 57 ~~~iG~~~~~~~---------------------~~i~~~~v~~~~rg~G~g~~ll~~~~~~-----~~~~~~~v~~~N~~ 110 (145)
T PRK10562 57 GKLLGFVSVLEG---------------------RFVGALFVAPKAVRRGIGKALMQHVQQR-----YPHLSLEVYQKNQR 110 (145)
T ss_pred CEEEEEEEEeec---------------------cEEEEEEECHHHcCCCHHHHHHHHHHhh-----CCeEEEEEEcCChH
Confidence 688999887421 3477799999999999999999988774 45678889999999
Q ss_pred hHhHHhhCCCeEeecC
Q 026519 193 ATKLYKGQGFKCVKVP 208 (237)
Q Consensus 193 a~~fy~k~GF~~~~~~ 208 (237)
+++||+|+||+.++..
T Consensus 111 s~~~y~k~Gf~~~~~~ 126 (145)
T PRK10562 111 AVNFYHAQGFRIVDSA 126 (145)
T ss_pred HHHHHHHCCCEEcccc
Confidence 9999999999999853
No 36
>TIGR03585 PseH pseudaminic acid biosynthesis N-acetyl transferase. Sequences in this family are members of the pfam00583 (GNAT) superfamily of acetyltransferases and are proposed to perform a N-acetylation step in the process of pseudaminic acid biosynthesis in Campylobacter species. This gene is commonly observed in apparent operons with other genes responsible for the biosynthesis of pseudaminic acid and as a component of flagellar and exopolysaccharide biosynthesis loci. Significantly, many genomes containing other components of this pathway lack this gene, indicating that some other N-acetyl transferases may be incolved and/or the step is optional, resulting in a non-acetylated pseudaminic acid variant sugar.
Probab=99.56 E-value=3.1e-14 Score=105.29 Aligned_cols=91 Identities=18% Similarity=0.135 Sum_probs=72.9
Q ss_pred CceEEEEEeccccCccCCCCCccccccCCCCCeeEEEEEEecccccccChHHHHHHHHHHHHHH-cCCcEEEEEeecCCc
Q 026519 113 GYVAGILTVDTVADFLPRKGPLRQRSSFHRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARG-WGCRSIALHCDFNNL 191 (237)
Q Consensus 113 ~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~-~g~~~i~l~~~~~N~ 191 (237)
+++||++.+..... ......+. +.+.|.+| +|||+.++..+++++++ .+++.+.+.|.+.|.
T Consensus 60 g~~vG~~~~~~~~~---------------~~~~~~~g-~~~~~~~~-~G~g~~~~~~~~~~a~~~~~~~~i~~~v~~~N~ 122 (156)
T TIGR03585 60 SRPIGVISFTDINL---------------VHKSAFWG-IYANPFCK-PGVGSVLEEAALEYAFEHLGLHKLSLEVLEFNN 122 (156)
T ss_pred CEEEEEEEEEecCh---------------hhCeEEEE-EEeChhhh-cCchHHHHHHHHHHHHhhCCeeEEEEEEeccCH
Confidence 78999988854311 01224555 55899999 99999999999999986 599999999999999
Q ss_pred chHhHHhhCCCeEeecCCCCCCCCCCCCC
Q 026519 192 GATKLYKGQGFKCVKVPEGANWPQPKNSP 220 (237)
Q Consensus 192 ~a~~fy~k~GF~~~~~~~~~~~~~~~~~~ 220 (237)
+|++||+|+||+.++..+......+.+.|
T Consensus 123 ~s~~~y~k~Gf~~~g~~~~~~~~~g~~~d 151 (156)
T TIGR03585 123 KALKLYEKFGFEREGVFRQGIFKEGEYYD 151 (156)
T ss_pred HHHHHHHHcCCeEeeeehhheeECCeEEE
Confidence 99999999999999988876555454433
No 37
>PF13673 Acetyltransf_10: Acetyltransferase (GNAT) domain; PDB: 2FIW_A 1BOB_A 3FNC_B 3EXN_A.
Probab=99.55 E-value=5.2e-14 Score=98.91 Aligned_cols=65 Identities=29% Similarity=0.536 Sum_probs=54.2
Q ss_pred CceEEEEEeccccCccCCCCCccccccCCCCCeeEEEEEEecccccccChHHHHHHHHHHHHHHcCCcEEEEEeecCCcc
Q 026519 113 GYVAGILTVDTVADFLPRKGPLRQRSSFHRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDFNNLG 192 (237)
Q Consensus 113 ~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~g~~~i~l~~~~~N~~ 192 (237)
++++|++.+.. ..+|..++|+|+|||+|||++|++.+++.+++ |++.+.+. .|..
T Consensus 53 ~~ivG~~~~~~---------------------~~~i~~l~v~p~~r~~Gig~~Ll~~~~~~~~~-~~~~l~~~---~~~~ 107 (117)
T PF13673_consen 53 GEIVGFAWLEP---------------------DGEISHLYVLPEYRGRGIGRALLDAAEKEAKD-GIRRLTVE---ANER 107 (117)
T ss_dssp TEEEEEEEEET---------------------CEEEEEEEE-GGGTTSSHHHHHHHHHHHHHTT-TCEEEEEE---C-HH
T ss_pred CEEEEEEEEcC---------------------CCeEEEEEEChhhcCCcHHHHHHHHHHHHHHc-CCcEEEEE---eCHH
Confidence 89999998742 14588899999999999999999999999977 88877665 7789
Q ss_pred hHhHHhhCCC
Q 026519 193 ATKLYKGQGF 202 (237)
Q Consensus 193 a~~fy~k~GF 202 (237)
+.+||+++||
T Consensus 108 a~~~y~~~GF 117 (117)
T PF13673_consen 108 ARRFYRKLGF 117 (117)
T ss_dssp HHHHHHHTT-
T ss_pred HHHHHHhCCC
Confidence 9999999998
No 38
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=99.53 E-value=1.4e-13 Score=113.49 Aligned_cols=134 Identities=16% Similarity=0.250 Sum_probs=94.3
Q ss_pred CCCCCceeeeccccCHHHHHHHhhcc--CCCCCCCCchhHHHHHHHHHHHhccccccccceeeEEEEECCccceeEEeec
Q 026519 19 XXSPEIVVREARIEDIWEVAETHCSC--FFPNYTFPLDLMLRVDRLVAMLSGFTVQHGTRRTCLVAVVGSRMDETFFLGS 96 (237)
Q Consensus 19 ~~~~~l~iR~~~~~D~~~l~~l~~~~--f~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~v~~ 96 (237)
...+.++||+++++|++++.+|...+ |...... .+ ...+...+.. + ..+.+..
T Consensus 182 ~l~m~~~Ir~a~~~Dl~ri~~L~~~tnqfn~~~~~-~s----~~~i~~~l~~-------------------~-~~~~~~~ 236 (320)
T TIGR01686 182 NLELSLNISKNDEQNVQRVEELLGRTNQFNATYTR-LN----QEDVAQHMQK-------------------E-EIVTVSM 236 (320)
T ss_pred hCCCEEEEEECChhhhHHHHHHHHhHHhhhccCcc-CC----HHHHHHHhcC-------------------C-CEEEEEE
Confidence 44456899999999999999998877 4321111 11 1122222221 0 1111111
Q ss_pred CcccccccCCcccccCCceEEEEEeccccCccCCCCCccccccCCCCCeeEEEEEEecccccccChHHHHHHHHHHHHHH
Q 026519 97 EDFKVGGLDGKFSLHRGYVAGILTVDTVADFLPRKGPLRQRSSFHRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARG 176 (237)
Q Consensus 97 ~~~~~~g~~~~~~~~~~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~ 176 (237)
.+ +. .++.+||++.+.. ....++|..++|+|.+||+|+|+.||+++++.+++
T Consensus 237 ~d-~~---------gd~givG~~~~~~------------------~~~~~~I~~l~vs~r~~grGig~~Ll~~l~~~a~~ 288 (320)
T TIGR01686 237 SD-RF---------GDSGIIGIFVFEK------------------KEGNLFIDDLCMSCRALGRGVETRMLRWLFEQALD 288 (320)
T ss_pred Ee-cC---------CCCceEEEEEEEe------------------cCCcEEEEEEEEcHhHhcCcHHHHHHHHHHHHHHH
Confidence 10 00 1367899987743 12347899999999999999999999999999999
Q ss_pred cCCcEEEEEeec--CCcchHhHHhhCCCeEe
Q 026519 177 WGCRSIALHCDF--NNLGATKLYKGQGFKCV 205 (237)
Q Consensus 177 ~g~~~i~l~~~~--~N~~a~~fy~k~GF~~~ 205 (237)
.|+..+.+.+.+ .|..|+.||+++||+.+
T Consensus 289 ~G~~~i~l~v~~~~~N~~A~~fY~~~GF~~~ 319 (320)
T TIGR01686 289 LGNHNARLYYRRTERNMPFLSFYEQIGFEDE 319 (320)
T ss_pred cCCCeEEEEEeeCCCchHHHHHHHHcCCccC
Confidence 999999998864 79999999999999854
No 39
>TIGR03448 mycothiol_MshD mycothiol biosynthesis acetyltransferase. Members of this family are MshD, the acetyltransferase that catalyzes the final step of mycothiol biosynthesis in various members of the Actinomyctes, Mycothiol replaces glutathione in these species.
Probab=99.52 E-value=5e-13 Score=109.02 Aligned_cols=62 Identities=19% Similarity=0.276 Sum_probs=58.1
Q ss_pred eEEEEEEecccccccChHHHHHHHHHHHHHHcCCcEEEEEeecCCcchHhHHhhCCCeEeec
Q 026519 146 AYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDFNNLGATKLYKGQGFKCVKV 207 (237)
Q Consensus 146 ~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~g~~~i~l~~~~~N~~a~~fy~k~GF~~~~~ 207 (237)
.+|..++|+|+|||+|||+.|++.+++++++.|+..+.+.+.++|..|++||+|+||+...+
T Consensus 227 ~~i~~~~V~p~~rg~GiG~~ll~~~~~~~~~~g~~~v~l~v~~~N~~a~~~y~k~GF~~~~~ 288 (292)
T TIGR03448 227 GEVYVVGVDPAAQGRGLGDALTLIGLHHLAARGLPAVMLYVEADNEAAVRTYEKLGFTVAEV 288 (292)
T ss_pred eEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEEEeCCCHHHHHHHHHcCCEEccc
Confidence 56777899999999999999999999999999999999999999999999999999998775
No 40
>PRK12308 bifunctional argininosuccinate lyase/N-acetylglutamate synthase; Provisional
Probab=99.52 E-value=1.1e-13 Score=123.08 Aligned_cols=125 Identities=19% Similarity=0.243 Sum_probs=88.5
Q ss_pred CCceeeeccccCHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhccccccccceeeEEEEECCccceeEEeecCcccc
Q 026519 22 PEIVVREARIEDIWEVAETHCSCFFPNYTFPLDLMLRVDRLVAMLSGFTVQHGTRRTCLVAVVGSRMDETFFLGSEDFKV 101 (237)
Q Consensus 22 ~~l~iR~~~~~D~~~l~~l~~~~f~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~v~~~~~~~ 101 (237)
..++||+++++|++.|.++....+......+... +.+. . ....+++++.+
T Consensus 462 ~gm~IR~a~~~D~~~I~~L~~~~~~~~~~~~~~~----~~l~---~--------------------~~~~~~Va~~~--- 511 (614)
T PRK12308 462 SGVKVRPARLTDIDAIEGMVAYWAGLGENLPRSR----NELV---R--------------------DIGSFAVAEHH--- 511 (614)
T ss_pred CCCEEEECCHHHHHHHHHHHHHHHhhhcccccCH----HHHh---c--------------------ccCcEEEEEEC---
Confidence 3478999999999999999765432211111100 0110 0 00123344333
Q ss_pred cccCCcccccCCceEEEEEeccccCccCCCCCccccccCCCCCeeEEEEEEecccccccChHHHHHHHHHHHHHHcCCcE
Q 026519 102 GGLDGKFSLHRGYVAGILTVDTVADFLPRKGPLRQRSSFHRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRS 181 (237)
Q Consensus 102 ~g~~~~~~~~~~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~g~~~ 181 (237)
+++||++.+... ....++|..++|+|+|||+|||+.|++.+++++++.|++.
T Consensus 512 -----------g~IVG~~~l~~~-----------------~~~~~~I~~i~V~P~~rGkGIGk~Ll~~l~~~ak~~g~~~ 563 (614)
T PRK12308 512 -----------GEVTGCASLYIY-----------------DSGLAEIRSLGVEAGWQVQGQGSALVQYLVEKARQMAIKK 563 (614)
T ss_pred -----------CEEEEEEEEEEc-----------------CCCeEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCCE
Confidence 789999877432 1234789999999999999999999999999999999999
Q ss_pred EEEEeecCCcchHhHHhhCCCeEeecCC
Q 026519 182 IALHCDFNNLGATKLYKGQGFKCVKVPE 209 (237)
Q Consensus 182 i~l~~~~~N~~a~~fy~k~GF~~~~~~~ 209 (237)
+.+.+ .+..||+|+||+.+++..
T Consensus 564 i~l~~-----~a~~FYek~GF~~~~~~~ 586 (614)
T PRK12308 564 VFVLT-----RVPEFFMKQGFSPTSKSL 586 (614)
T ss_pred EEEee-----CcHHHHHHCCCEECCccc
Confidence 88754 357899999999998654
No 41
>PRK10314 putative acyltransferase; Provisional
Probab=99.52 E-value=1.2e-13 Score=101.87 Aligned_cols=94 Identities=15% Similarity=0.173 Sum_probs=71.0
Q ss_pred CceEEEEEeccccCccCCCCCccccccCCCCCeeEEEEEEecccccccChHHHHHHHHHHHHHHc-CCcEEEEEeecCCc
Q 026519 113 GYVAGILTVDTVADFLPRKGPLRQRSSFHRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGW-GCRSIALHCDFNNL 191 (237)
Q Consensus 113 ~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~-g~~~i~l~~~~~N~ 191 (237)
+++||++.+....+ ....++|..++|+|+|||+|||+.||+.+++.+++. +...+.|++. .
T Consensus 57 ~~~vg~~r~~~~~~---------------~~~~~~i~rv~V~~~~rG~GiG~~Lm~~~~~~~~~~~~~~~i~L~a~---~ 118 (153)
T PRK10314 57 DELVAYARILKSDD---------------DLEPVVIGRVIVSEALRGEKVGQQLMSKTLESCTRHWPDKPVYLGAQ---A 118 (153)
T ss_pred CEEEEEEEEecCCC---------------CCCCEEEEEEEECHHHhCCCHHHHHHHHHHHHHHHHCCCCcEEEehH---H
Confidence 78999988854211 112378999999999999999999999999999875 6777877664 4
Q ss_pred chHhHHhhCCCeEeecCCCCCCCCCCCCCCceeEeeeeccC
Q 026519 192 GATKLYKGQGFKCVKVPEGANWPQPKNSPDVKFKFMMKLLK 232 (237)
Q Consensus 192 ~a~~fy~k~GF~~~~~~~~~~~~~~~~~~~~~~~~m~k~L~ 232 (237)
.+.+||+|+||+.++.. | ..++.....|.|.+.
T Consensus 119 ~a~~fY~k~GF~~~g~~----f----~~~Gi~h~~M~~~~~ 151 (153)
T PRK10314 119 HLQNFYQSFGFIPVTEV----Y----EEDGIPHIGMAREVI 151 (153)
T ss_pred HHHHHHHHCCCEECCCc----c----ccCCCCcHhhhhhhh
Confidence 68899999999998842 1 233445666766553
No 42
>PHA01807 hypothetical protein
Probab=99.52 E-value=2.4e-13 Score=99.58 Aligned_cols=80 Identities=20% Similarity=0.102 Sum_probs=64.2
Q ss_pred CceEEEEEeccccCccCCCCCccccccCCCCCeeEEEEEEecccccccChHHHHHHHHHHHHHHcCCcEEEEEeecCCcc
Q 026519 113 GYVAGILTVDTVADFLPRKGPLRQRSSFHRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDFNNLG 192 (237)
Q Consensus 113 ~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~g~~~i~l~~~~~N~~ 192 (237)
++++|++.+...... +......+..|+|+|+|||+|||+.||+.+++.+++.|+..+.+.+..+|.+
T Consensus 62 g~lvG~~~l~~~~~~-------------~~~~i~~l~~lYV~pe~RG~GiG~~Ll~~~~~~Ar~~G~~~l~l~v~~~n~~ 128 (153)
T PHA01807 62 GKLAGIAVLVFEDDP-------------HVGPCLGVQWQYVLPEYRNAGVAREFLRELIRLAGEGNLPLIAFSHREGEGR 128 (153)
T ss_pred CEEEEEEEEEcCCCc-------------ceeeeccceeEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEEecCCcHH
Confidence 789999887543211 0112244566899999999999999999999999999999999999999999
Q ss_pred hHhHHhhCCCeEeec
Q 026519 193 ATKLYKGQGFKCVKV 207 (237)
Q Consensus 193 a~~fy~k~GF~~~~~ 207 (237)
|++||++ |++.+.
T Consensus 129 a~~~y~~--~~~~~~ 141 (153)
T PHA01807 129 YTIHYRR--VKPYGQ 141 (153)
T ss_pred HHHHHHh--cCccCC
Confidence 9999997 445543
No 43
>KOG3396 consensus Glucosamine-phosphate N-acetyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=99.48 E-value=6.7e-13 Score=91.84 Aligned_cols=82 Identities=27% Similarity=0.397 Sum_probs=68.2
Q ss_pred CCceEEEEEeccccCccCCCCCccccccCCCCCeeEEEEEEecccccccChHHHHHHHHHHHHHHcCCcEEEEEeecCCc
Q 026519 112 RGYVAGILTVDTVADFLPRKGPLRQRSSFHRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDFNNL 191 (237)
Q Consensus 112 ~~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~g~~~i~l~~~~~N~ 191 (237)
.+++||...+.....+.-. -+..++|..+.|+++|||++||+.|+..+...+++.|.-.+.|.|.+.|
T Consensus 63 s~~vigtatL~IE~KfIh~-----------~g~rGhiEDVVV~~~~rgk~LGkllv~~Lv~l~k~lgcYKi~LdC~~~n- 130 (150)
T KOG3396|consen 63 SEKVIGTATLFIERKFIHG-----------CGSRGHIEDVVVDSEYRGKQLGKLLVETLVDLAKSLGCYKIILDCDPKN- 130 (150)
T ss_pred cCeEEEEEEEEEehhhhhc-----------ccccCceeEEEeChhhhhhHHhHHHHHHHHHHHHhcCcEEEEEecchhh-
Confidence 4789998888654333221 2345899999999999999999999999999999999999999999865
Q ss_pred chHhHHhhCCCeEeec
Q 026519 192 GATKLYKGQGFKCVKV 207 (237)
Q Consensus 192 ~a~~fy~k~GF~~~~~ 207 (237)
+.||+|+||...+.
T Consensus 131 --v~FYeKcG~s~~~~ 144 (150)
T KOG3396|consen 131 --VKFYEKCGYSNAGN 144 (150)
T ss_pred --hhHHHHcCccccch
Confidence 67999999987763
No 44
>KOG3138 consensus Predicted N-acetyltransferase [General function prediction only]
Probab=99.47 E-value=3.7e-13 Score=100.26 Aligned_cols=73 Identities=25% Similarity=0.387 Sum_probs=66.6
Q ss_pred eeEEEEEEecccccccChHHHHHHHHHHHHHHcC-CcEEEEEeecCCcchHhHHhhCCCeEeecCCCCCCCCCC
Q 026519 145 IAYISNVAVREKFRRKGIAKRLIAKAEAQARGWG-CRSIALHCDFNNLGATKLYKGQGFKCVKVPEGANWPQPK 217 (237)
Q Consensus 145 ~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~g-~~~i~l~~~~~N~~a~~fy~k~GF~~~~~~~~~~~~~~~ 217 (237)
..+|..++|.+.||.+|||+.|++.+.+++.+.. ++.+++++...|..++.||++.||+.+.+...++-....
T Consensus 89 ~~yi~~Lgvl~~yR~~gIGs~Ll~~~~~~~~~~~~~~~v~lHv~~~n~~ai~~Y~~~gF~~~~~~~~~y~~~~~ 162 (187)
T KOG3138|consen 89 VIYILSLGVLPRYRNKGIGSKLLEFVKKYCSEAHQCRRVYLHVQAVNESAIEFYEKRGFEIVERLKNYYSILGP 162 (187)
T ss_pred eeEEEeecccHHHHhcchHHHHHHHHHHHHhcccccceEEEEEEeCCCcHHHHHHhcCceEeeccccccccccC
Confidence 4889999999999999999999999999999876 889999999999999999999999999998887654433
No 45
>PF13508 Acetyltransf_7: Acetyltransferase (GNAT) domain; PDB: 3EY5_A 3FRM_B 3D8P_B 3GY9_A 3GYA_A 3S6F_A 2Q7B_A 1CM0_B 1XEB_B 1Y7R_A ....
Probab=99.46 E-value=7.6e-13 Score=86.47 Aligned_cols=68 Identities=31% Similarity=0.515 Sum_probs=55.9
Q ss_pred CceEEEEEeccccCccCCCCCccccccCCCCCeeEEEEEEecccccccChHHHHHHHHHHHHHHcCCcEEEEEeecCCcc
Q 026519 113 GYVAGILTVDTVADFLPRKGPLRQRSSFHRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDFNNLG 192 (237)
Q Consensus 113 ~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~g~~~i~l~~~~~N~~ 192 (237)
++++|++.+.. ..+..+|..++|+|++||+|||+.|++++.+.+.. ..+.+.+ ++.
T Consensus 12 ~~ivG~~~~~~------------------~~~~~~i~~~~v~~~~rg~Gig~~ll~~~~~~~~~---~~i~l~~---~~~ 67 (79)
T PF13508_consen 12 GEIVGFIRLWP------------------NEDFAYIGYLAVDPEYRGKGIGSKLLNYLLEKAKS---KKIFLFT---NPA 67 (79)
T ss_dssp TEEEEEEEEEE------------------TTTEEEEEEEEE-GGGTTSSHHHHHHHHHHHHHTC---SEEEEEE---EHH
T ss_pred CEEEEEEEEEE------------------cCCEEEEEEEEECHHHcCCCHHHHHHHHHHHHcCC---CcEEEEE---cHH
Confidence 89999999843 24468999999999999999999999999888843 4566665 458
Q ss_pred hHhHHhhCCCeE
Q 026519 193 ATKLYKGQGFKC 204 (237)
Q Consensus 193 a~~fy~k~GF~~ 204 (237)
+.+||+++||++
T Consensus 68 ~~~fY~~~GF~~ 79 (79)
T PF13508_consen 68 AIKFYEKLGFEE 79 (79)
T ss_dssp HHHHHHHTTEEE
T ss_pred HHHHHHHCcCCC
Confidence 999999999984
No 46
>PRK01346 hypothetical protein; Provisional
Probab=99.44 E-value=2.4e-12 Score=109.98 Aligned_cols=134 Identities=18% Similarity=0.144 Sum_probs=90.5
Q ss_pred CCCCceeeeccccCHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhccccccccceeeEEEEECCccceeEEeecCcc
Q 026519 20 XSPEIVVREARIEDIWEVAETHCSCFFPNYTFPLDLMLRVDRLVAMLSGFTVQHGTRRTCLVAVVGSRMDETFFLGSEDF 99 (237)
Q Consensus 20 ~~~~l~iR~~~~~D~~~l~~l~~~~f~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~v~~~~~ 99 (237)
|.+.++||+++++|++++.+|...+|...+ .. ...+....... . ...+++..+
T Consensus 3 ~~~~~~iR~~~~~D~~~i~~L~~~~f~~~~--~~---~~~~~~~~~~~--------------------~-~~~~va~~~- 55 (411)
T PRK01346 3 RDMAITIRTATEEDWPAWFRAAATGFGDSP--SD---EELEAWRALVE--------------------P-DRTLGAFDG- 55 (411)
T ss_pred CCCCceeecCCHHHHHHHHHHHHHHcCCCC--Ch---HHHHHHHHhcC--------------------c-CCeEEEEEC-
Confidence 345689999999999999999999986543 11 11111111100 0 112222222
Q ss_pred cccccCCcccccCCceEEEEEeccccCccCCCCCccccccCCCCCeeEEEEEEecccccccChHHHHHHHHHHHHHHcCC
Q 026519 100 KVGGLDGKFSLHRGYVAGILTVDTVADFLPRKGPLRQRSSFHRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGC 179 (237)
Q Consensus 100 ~~~g~~~~~~~~~~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~g~ 179 (237)
+++||++.+......... + ...+..+|..++|+|+|||+|||++||+++++.+++.|.
T Consensus 56 -------------~~lvg~~~~~~~~~~~~~-~--------~~~~~~~i~~v~V~P~~RgrGig~~Ll~~~l~~a~~~g~ 113 (411)
T PRK01346 56 -------------DEVVGTAGAFDLRLTVPG-G--------AVLPAAGVTAVTVAPTHRRRGLLTALMREQLRRIRERGE 113 (411)
T ss_pred -------------CEEEEEEEEeccccccCC-C--------CccceeEEEEEEEChhhcCCCHHHHHHHHHHHHHHHCCC
Confidence 788898886432111000 0 012458899999999999999999999999999999999
Q ss_pred cEEEEEeecCCcchHhHHhhCCCeEeec
Q 026519 180 RSIALHCDFNNLGATKLYKGQGFKCVKV 207 (237)
Q Consensus 180 ~~i~l~~~~~N~~a~~fy~k~GF~~~~~ 207 (237)
..+.|.+.. .+||+|.||.....
T Consensus 114 ~~~~L~~~~-----~~~Y~r~Gf~~~~~ 136 (411)
T PRK01346 114 PVAALTASE-----GGIYGRFGYGPATY 136 (411)
T ss_pred cEEEEECCc-----hhhHhhCCCeeccc
Confidence 887776532 47999999998864
No 47
>PRK13688 hypothetical protein; Provisional
Probab=99.40 E-value=2.2e-12 Score=95.00 Aligned_cols=59 Identities=15% Similarity=0.241 Sum_probs=46.5
Q ss_pred CCCeeEEEEEEecccccccChHHHHHHHHHHHHHHcCCcEEEEEeecCCcchHhHHhhCCCeEeecC
Q 026519 142 RTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDFNNLGATKLYKGQGFKCVKVP 208 (237)
Q Consensus 142 ~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~g~~~i~l~~~~~N~~a~~fy~k~GF~~~~~~ 208 (237)
....++|..++|+|+|||+|||++|++.+ ++.++. +.+...| .+.+||+|+||+.+++.
T Consensus 76 ~~~~~~L~~l~V~p~~rgkGiG~~Ll~~a----~~~~~~---~~~~~~~-~a~~FY~k~GF~~~~~~ 134 (156)
T PRK13688 76 TQDYLELWKLEVLPKYQNRGYGEMLVDFA----KSFQLP---IKTIARN-KSKDFWLKLGFTPVEYK 134 (156)
T ss_pred CCCeEEEEEEEECHHHcCCCHHHHHHHHH----HHhCCe---EEEEecc-chHHHHHhCCCEEeEEe
Confidence 34568999999999999999999999854 344543 3445555 57899999999999876
No 48
>TIGR03448 mycothiol_MshD mycothiol biosynthesis acetyltransferase. Members of this family are MshD, the acetyltransferase that catalyzes the final step of mycothiol biosynthesis in various members of the Actinomyctes, Mycothiol replaces glutathione in these species.
Probab=99.40 E-value=3.3e-12 Score=104.14 Aligned_cols=74 Identities=16% Similarity=0.173 Sum_probs=60.6
Q ss_pred CceEEEEEeccccCccCCCCCccccccCCCCCeeEEEEEEecccccccChHHHHHHHHHHHHHHcCCcEEEEEeecCCcc
Q 026519 113 GYVAGILTVDTVADFLPRKGPLRQRSSFHRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDFNNLG 192 (237)
Q Consensus 113 ~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~g~~~i~l~~~~~N~~ 192 (237)
+++||++.+.... ....++..++|+|+|||+|||++||+++++.+. ..+.+.+...|..
T Consensus 55 ~~~vG~~~~~~~~-----------------~~~~~~~~l~V~p~~rg~GiG~~Ll~~~~~~~~----~~~~~~~~~~n~~ 113 (292)
T TIGR03448 55 DPIVGYANLVPAR-----------------GTDPAMAELVVHPAHRRRGIGRALIRALLAKGG----GRLRVWAHGDLPA 113 (292)
T ss_pred CEEEEEEEEEcCC-----------------CCcceEEEEEECHhhcCCCHHHHHHHHHHHhcc----CceEEEEcCCCHH
Confidence 7899998875321 112468889999999999999999999998764 4577888888999
Q ss_pred hHhHHhhCCCeEeec
Q 026519 193 ATKLYKGQGFKCVKV 207 (237)
Q Consensus 193 a~~fy~k~GF~~~~~ 207 (237)
|++||+++||+.+..
T Consensus 114 a~~fy~~~Gf~~~~~ 128 (292)
T TIGR03448 114 ARALASRLGLVPTRE 128 (292)
T ss_pred HHHHHHHCCCEEccE
Confidence 999999999988763
No 49
>COG3153 Predicted acetyltransferase [General function prediction only]
Probab=99.38 E-value=2.8e-11 Score=89.29 Aligned_cols=151 Identities=19% Similarity=0.175 Sum_probs=101.0
Q ss_pred CCceeeeccccCHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhccccccccceeeEEEEECCccceeEEeecCcccc
Q 026519 22 PEIVVREARIEDIWEVAETHCSCFFPNYTFPLDLMLRVDRLVAMLSGFTVQHGTRRTCLVAVVGSRMDETFFLGSEDFKV 101 (237)
Q Consensus 22 ~~l~iR~~~~~D~~~l~~l~~~~f~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~v~~~~~~~ 101 (237)
+++.||.-++.|++.|.++.+++|.. + ......+++..... -....-+|+.++
T Consensus 2 ~~~~ir~e~~~d~~~i~~~~~~aF~~-~----~e~~~v~~lR~~~~-------------------~~~~LslVA~d~--- 54 (171)
T COG3153 2 MMMLIRTETPADIPAIEALTREAFGP-G----REAKLVDKLREGGR-------------------PDLTLSLVAEDD--- 54 (171)
T ss_pred CccEEEecChhhHHHHHHHHHHHhhc-c----hHHHHHHHHHhcCC-------------------cccceeEEEeeC---
Confidence 35789999999999999999999851 1 11112222211110 012334455544
Q ss_pred cccCCcccccCCceEEEEEeccccCccCCCCCccccccCCCCCeeEEEEEEecccccccChHHHHHHHHHHHHHHcCCcE
Q 026519 102 GGLDGKFSLHRGYVAGILTVDTVADFLPRKGPLRQRSSFHRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRS 181 (237)
Q Consensus 102 ~g~~~~~~~~~~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~g~~~ 181 (237)
+++||.+.+....-- + ...+..-+..++|+|++||+|||++|++..++.++..|+..
T Consensus 55 -----------g~vvG~Il~s~v~~~----g--------~~~~~~~LaPLaV~p~~qg~GIG~~Lvr~~le~a~~~G~~~ 111 (171)
T COG3153 55 -----------GEVVGHILFSPVTVG----G--------EELGWLGLAPLAVDPEYQGQGIGSALVREGLEALRLAGASA 111 (171)
T ss_pred -----------CEEEEEEEEeEEEec----C--------cccceEEEEeEEEchhhcCCcHHHHHHHHHHHHHHHCCCCE
Confidence 889999988643211 0 02234778889999999999999999999999999999988
Q ss_pred EEEEeecCCcchHhHHhhCCCeEeecCCCCCCCCCCCCCCceeEeeeeccCC
Q 026519 182 IALHCDFNNLGATKLYKGQGFKCVKVPEGANWPQPKNSPDVKFKFMMKLLKA 233 (237)
Q Consensus 182 i~l~~~~~N~~a~~fy~k~GF~~~~~~~~~~~~~~~~~~~~~~~~m~k~L~~ 233 (237)
+.+.= .-.+|.+.||+......... +.. ...-.+|++.|..
T Consensus 112 v~vlG------dp~YY~rfGF~~~~~~~l~~---p~~--~~~~~fl~~~L~~ 152 (171)
T COG3153 112 VVVLG------DPTYYSRFGFEPAAGAKLYA---PGP--VPDERFLALELGD 152 (171)
T ss_pred EEEec------CcccccccCcEEcccccccc---CCC--CCCceEEEEEccC
Confidence 76633 34499999999998655431 111 2234667777754
No 50
>PF08445 FR47: FR47-like protein; InterPro: IPR013653 Proteins in this entry have a conserved region similar to the C-terminal region of the Drosophila melanogaster (Fruit fly) hypothetical protein FR47 (Q9VR51 from SWISSPROT). This protein has been found to consist of two N-acyltransferase-like domains swapped with the C-terminal strands. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups; PDB: 1SQH_A 3EC4_B.
Probab=99.38 E-value=4.4e-12 Score=83.99 Aligned_cols=61 Identities=25% Similarity=0.344 Sum_probs=53.3
Q ss_pred eEEEEEEecccccccChHHHHHHHHHHHHHHcCCcEEEEEeecCCcchHhHHhhCCCeEeec
Q 026519 146 AYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDFNNLGATKLYKGQGFKCVKV 207 (237)
Q Consensus 146 ~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~g~~~i~l~~~~~N~~a~~fy~k~GF~~~~~ 207 (237)
+.|..+.|+|++||+|+|+.++..+.+.+.+.|.. .++.+..+|.+|+++|+|+||+....
T Consensus 22 g~i~~v~t~p~~RrrGlg~~lv~~l~~~~~~~g~~-~~l~v~~~N~~s~~ly~klGf~~~~~ 82 (86)
T PF08445_consen 22 GEIGGVYTLPEHRRRGLGSALVAALARELLERGKT-PFLYVDADNEASIRLYEKLGFREIEE 82 (86)
T ss_dssp CCEEEEEE-GGGTTSSHHHHHHHHHHHHHHHTTSE-EEEEEETT-HHHHHHHHHCT-EEEEE
T ss_pred cEEEEEEECHHHcCCCHHHHHHHHHHHHHHhCCCc-EEEEEECCCHHHHHHHHHcCCEEEEE
Confidence 77899999999999999999999999999998774 67889999999999999999999864
No 51
>KOG3234 consensus Acetyltransferase, (GNAT) family [General function prediction only]
Probab=99.33 E-value=7.5e-12 Score=88.91 Aligned_cols=84 Identities=21% Similarity=0.218 Sum_probs=72.7
Q ss_pred eeEEEEEEecccccccChHHHHHHHHHHHHHHcCCcEEEEEeecCCcchHhHHhhCCCeEeecCCCCCCCCCCCCCCcee
Q 026519 145 IAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDFNNLGATKLYKGQGFKCVKVPEGANWPQPKNSPDVKF 224 (237)
Q Consensus 145 ~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~g~~~i~l~~~~~N~~a~~fy~k~GF~~~~~~~~~~~~~~~~~~~~~~ 224 (237)
++|+..+.|.|+||+.|+|+.||+.+.+.....+.--+-|.|..+|.-|+.+|+++||....+...+++. + ++.+.
T Consensus 69 h~HvTAltVap~~Rrl~la~~lm~~led~~d~~~a~fvDLfVr~sN~iAI~mYkkLGY~~YR~Vi~YY~~-g---~deda 144 (173)
T KOG3234|consen 69 HGHVTALTVAPDYRRLGLAAKLMDTLEDVSDVDNAYFVDLFVRVSNQIAIDMYKKLGYSVYRTVIEYYSV-G---PDEDA 144 (173)
T ss_pred eeEEEEEEechhHHHHHHHHHHHHHHHHHHHhhhhheeeeeeeccchhHHHHHHhcCceEEEeeeeeecc-C---CCcch
Confidence 4889999999999999999999999999998877778889999999999999999999999988887764 2 23445
Q ss_pred EeeeeccC
Q 026519 225 KFMMKLLK 232 (237)
Q Consensus 225 ~~m~k~L~ 232 (237)
.-|.|.|+
T Consensus 145 ~dMRKalS 152 (173)
T KOG3234|consen 145 YDMRKALS 152 (173)
T ss_pred Hhhhhhhc
Confidence 66777775
No 52
>COG1670 RimL Acetyltransferases, including N-acetylases of ribosomal proteins [Translation, ribosomal structure and biogenesis]
Probab=99.33 E-value=2.6e-11 Score=91.79 Aligned_cols=98 Identities=16% Similarity=0.227 Sum_probs=76.8
Q ss_pred CceEEEEEeccccCccCCCCCccccccCCCCCeeEEEEEEecccccccChHHHHHHHHHHHHHH-cCCcEEEEEeecCCc
Q 026519 113 GYVAGILTVDTVADFLPRKGPLRQRSSFHRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARG-WGCRSIALHCDFNNL 191 (237)
Q Consensus 113 ~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~-~g~~~i~l~~~~~N~ 191 (237)
+++||.+.+..... . ......+|+ ..+.|+++|+|+|+.++..+++++++ .++..+.+.|.+.|.
T Consensus 77 ~~~iG~~~~~~~~~--~-----------~~~~~~~ig-~~l~~~~~g~G~~tea~~~~l~~~f~~~~l~ri~~~~~~~N~ 142 (187)
T COG1670 77 GELIGVIGLSDIDR--A-----------ANGDLAEIG-YWLDPEYWGKGYATEALRALLDYAFEELGLHRIEATVDPENE 142 (187)
T ss_pred CeEEEEEEEEEecc--c-----------cccceEEEE-EEEChHHhcCchHHHHHHHHHHHhhhhcCceEEEEEecCCCH
Confidence 58999998865422 0 012335555 77799999999999999999999997 599999999999999
Q ss_pred chHhHHhhCCCeEeecCCCCCCCCCCCCCCcee
Q 026519 192 GATKLYKGQGFKCVKVPEGANWPQPKNSPDVKF 224 (237)
Q Consensus 192 ~a~~fy~k~GF~~~~~~~~~~~~~~~~~~~~~~ 224 (237)
+|+++++|+||+..+..+...+..+.+.+...+
T Consensus 143 ~S~rv~ek~Gf~~eg~~~~~~~~~g~~~d~~~~ 175 (187)
T COG1670 143 ASIRVYEKLGFRLEGELRQHEFIKGRWRDTVLY 175 (187)
T ss_pred HHHHHHHHcCChhhhhhhhceeeCCeeeeEEEE
Confidence 999999999999999887764444444443333
No 53
>cd02169 Citrate_lyase_ligase Citrate lyase ligase. Citrate lyase ligase, also known as [Citrate (pro-3S)-lyase] ligase, is responsible for acetylation of the (2-(5''-phosphoribosyl)-3'-dephosphocoenzyme-A) prosthetic group of the gamma subunit of citrate lyase, converting the inactive thiol form of this enzyme to the active form. The acetylation of 1 molecule of deacetyl-citrate lyase to enzymatically active citrate lyase requires 6 molecules of ATP. The Adenylylyltranferase activity of the enzyme involves the formation of AMP and and pyrophosphate in the acetylation reaction.
Probab=99.32 E-value=1.4e-11 Score=99.67 Aligned_cols=73 Identities=21% Similarity=0.315 Sum_probs=62.6
Q ss_pred CceEEEEEeccccCccCCCCCccccccCCCCCeeEEEEEEecccccccChHHHHHHHHHHHHHHcCCcEEEEEeecCCcc
Q 026519 113 GYVAGILTVDTVADFLPRKGPLRQRSSFHRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDFNNLG 192 (237)
Q Consensus 113 ~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~g~~~i~l~~~~~N~~ 192 (237)
+++||++.+.. ..|..++|+|+|||+|+|+.||+++++++++.|+..+.|.+...
T Consensus 15 ~~iVG~~~l~~----------------------~~I~~vaV~p~~Rg~GiG~~Ll~~l~~~a~~~g~~~i~L~t~~~--- 69 (297)
T cd02169 15 GELIATGSIAG----------------------NVLKCVAVCPKYQGEGLALKIVSELINKAYEEGIFHLFLFTKPK--- 69 (297)
T ss_pred CEEEEEEEecc----------------------CEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEEEccc---
Confidence 78999887732 34888999999999999999999999999999999999987653
Q ss_pred hHhHHhhCCCeEeecCCC
Q 026519 193 ATKLYKGQGFKCVKVPEG 210 (237)
Q Consensus 193 a~~fy~k~GF~~~~~~~~ 210 (237)
+.+||+|+||+..+...+
T Consensus 70 ~~~fYek~GF~~~~~~~~ 87 (297)
T cd02169 70 NAKFFRGLGFKELANASD 87 (297)
T ss_pred HHHHHHHCCCEEecccCC
Confidence 478999999999984443
No 54
>COG3981 Predicted acetyltransferase [General function prediction only]
Probab=99.23 E-value=2.9e-10 Score=82.53 Aligned_cols=85 Identities=25% Similarity=0.328 Sum_probs=71.5
Q ss_pred CceEEEEEeccccCccCCCCCccccccCCCCCeeEEEEEEecccccccChHHHHHHHHHHHHHHcCCcEEEEEeecCCcc
Q 026519 113 GYVAGILTVDTVADFLPRKGPLRQRSSFHRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDFNNLG 192 (237)
Q Consensus 113 ~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~g~~~i~l~~~~~N~~ 192 (237)
+++||++.++...+..- -...+||+ ..|.|+.||+|+|+.||+.+++.|++.|++.+.++|+.+|.+
T Consensus 78 ~~ivG~i~lRh~Ln~~l------------l~~gGHIG-Y~VrPseR~KGYA~emLkl~L~~ar~lgi~~Vlvtcd~dN~A 144 (174)
T COG3981 78 GQIVGFINLRHQLNDFL------------LEEGGHIG-YSVRPSERRKGYAKEMLKLALEKARELGIKKVLVTCDKDNIA 144 (174)
T ss_pred CcEEEEEEeeeecchHH------------HhcCCccc-ceeChhhhccCHHHHHHHHHHHHHHHcCCCeEEEEeCCCCch
Confidence 89999999875432110 01136777 889999999999999999999999999999999999999999
Q ss_pred hHhHHhhCCCeEeecCCC
Q 026519 193 ATKLYKGQGFKCVKVPEG 210 (237)
Q Consensus 193 a~~fy~k~GF~~~~~~~~ 210 (237)
|.+.-+++|=....+...
T Consensus 145 SrkvI~~NGGile~~~~~ 162 (174)
T COG3981 145 SRKVIEANGGILENEFFG 162 (174)
T ss_pred hhHHHHhcCCEEeEEEcc
Confidence 999999999888876544
No 55
>COG3393 Predicted acetyltransferase [General function prediction only]
Probab=99.20 E-value=3.8e-10 Score=87.53 Aligned_cols=77 Identities=23% Similarity=0.293 Sum_probs=66.2
Q ss_pred CceEEEEEeccccCccCCCCCccccccCCCCCeeEEEEEEecccccccChHHHHHHHHHHHHHHcCCcEEEEEeecCCcc
Q 026519 113 GYVAGILTVDTVADFLPRKGPLRQRSSFHRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDFNNLG 192 (237)
Q Consensus 113 ~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~g~~~i~l~~~~~N~~ 192 (237)
|++|..+..... .+....|..++++|+|||+|+|+.|+..+.+..-+.|.. .+|.+...|+.
T Consensus 186 ~~iVa~A~t~a~-----------------~~~~~~I~gV~T~peyR~kGyAt~lva~L~~~lL~eGk~-~~L~~~~~N~~ 247 (268)
T COG3393 186 GKIVAKAETAAE-----------------NPAYAQINGVYTHPEYRGKGYATALVATLAAKLLAEGKI-PCLFVNSDNPV 247 (268)
T ss_pred CcEEEeeecccc-----------------CCcceEEEEEEcCHHHccccHHHHHHHHHHHHHHhCCCe-eEEEEecCCHH
Confidence 578887776532 456688999999999999999999999999998887764 46788899999
Q ss_pred hHhHHhhCCCeEeec
Q 026519 193 ATKLYKGQGFKCVKV 207 (237)
Q Consensus 193 a~~fy~k~GF~~~~~ 207 (237)
|.+.|+|.||+..+.
T Consensus 248 A~~iY~riGF~~~g~ 262 (268)
T COG3393 248 ARRIYQRIGFREIGE 262 (268)
T ss_pred HHHHHHHhCCeecce
Confidence 999999999999984
No 56
>KOG2488 consensus Acetyltransferase (GNAT) domain-containing protein [General function prediction only]
Probab=99.19 E-value=9.9e-11 Score=85.99 Aligned_cols=84 Identities=24% Similarity=0.286 Sum_probs=72.0
Q ss_pred CceEEEEEeccccCccCCCCCccccccCCCCCeeEEEEEEecccccccChHHHHHHHHHHHHHHcCCcEEEEEeecCCcc
Q 026519 113 GYVAGILTVDTVADFLPRKGPLRQRSSFHRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDFNNLG 192 (237)
Q Consensus 113 ~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~g~~~i~l~~~~~N~~ 192 (237)
+.+||++.+...-+ +....+|+..+-|.+.|||+|||+.||+.+...+.....+.|.|+|...|.+
T Consensus 102 ~~~vgf~~Frf~vd--------------~g~~vlYcyEvqv~~~yR~kGiGk~LL~~l~~~a~~~~~~kVmLTVf~~N~~ 167 (202)
T KOG2488|consen 102 SKLVGFTMFRFTVD--------------TGDPVLYCYEVQVASAYRGKGIGKFLLDTLEKLADSRHMRKVMLTVFSENIR 167 (202)
T ss_pred CceeeEEEEEEEcc--------------cCCeEEEEEEEeehhhhhccChHHHHHHHHHHHHHHHHhhhheeeeecccch
Confidence 47889998865422 1345689999999999999999999999999999988888999999999999
Q ss_pred hHhHHhhCCCeEeecCCC
Q 026519 193 ATKLYKGQGFKCVKVPEG 210 (237)
Q Consensus 193 a~~fy~k~GF~~~~~~~~ 210 (237)
|+.||+++||..-...+.
T Consensus 168 al~Fy~~~gf~~~~~sp~ 185 (202)
T KOG2488|consen 168 ALGFYHRLGFVVDEESPC 185 (202)
T ss_pred hHHHHHHcCcccCCCCCc
Confidence 999999999998765443
No 57
>TIGR00124 cit_ly_ligase [citrate (pro-3S)-lyase] ligase. ATP is cleaved to AMP and pyrophosphate during the reaction. The carboxyl end is homologous to a number of cytidyltransferases that also release pyrophosphate.
Probab=99.13 E-value=5.2e-10 Score=92.02 Aligned_cols=73 Identities=22% Similarity=0.281 Sum_probs=63.2
Q ss_pred CceEEEEEeccccCccCCCCCccccccCCCCCeeEEEEEEecccccccChHHHHHHHHHHHHHHcCCcEEEEEeecCCcc
Q 026519 113 GYVAGILTVDTVADFLPRKGPLRQRSSFHRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDFNNLG 192 (237)
Q Consensus 113 ~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~g~~~i~l~~~~~N~~ 192 (237)
+++||+..+.. ..|..++|+|+|||+|||+.|++++++.+++.|+..+.+.+.+.|
T Consensus 40 ~~lVg~g~l~g----------------------~~ik~vaV~~~~rG~Glg~~L~~~L~~~a~~~G~~~l~l~Tk~~~-- 95 (332)
T TIGR00124 40 EEIIGCGGIAG----------------------NVIKCVAIDESLRGEGLALQLMTELENLAYELGRFHLFIFTKPEY-- 95 (332)
T ss_pred CEEEEEEEEec----------------------CEEEEEEEcHHHcCCCHHHHHHHHHHHHHHHcCCCEEEEEECchH--
Confidence 78999988732 237789999999999999999999999999999999999887644
Q ss_pred hHhHHhhCCCeEeecCCC
Q 026519 193 ATKLYKGQGFKCVKVPEG 210 (237)
Q Consensus 193 a~~fy~k~GF~~~~~~~~ 210 (237)
..||+++||+..+..++
T Consensus 96 -~~fy~klGF~~i~~~~~ 112 (332)
T TIGR00124 96 -AALFEYCGFKTLAEAKD 112 (332)
T ss_pred -HHHHHHcCCEEeeeecc
Confidence 57999999999997654
No 58
>KOG3397 consensus Acetyltransferases [General function prediction only]
Probab=99.13 E-value=7.8e-10 Score=79.96 Aligned_cols=78 Identities=21% Similarity=0.283 Sum_probs=65.9
Q ss_pred CceEEEEEeccccCccCCCCCccccccCCCCCeeEEEEEEecccccccChHHHHHHHHHHHHHHcCCcEEEEEeecCCcc
Q 026519 113 GYVAGILTVDTVADFLPRKGPLRQRSSFHRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDFNNLG 192 (237)
Q Consensus 113 ~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~g~~~i~l~~~~~N~~ 192 (237)
.++||...+....+ ..+.+.+..+.|+.+.||+|+|+.||+.++.++++.|++.++|.+..
T Consensus 66 ~~VigH~rLS~i~n---------------~~~al~VEsVVV~k~~RG~GFGk~lMk~~E~~~R~~gf~~~yLsT~D---- 126 (225)
T KOG3397|consen 66 DEVLGHSRLSHLPN---------------RDHALWVESVVVKKDQRGLGFGKFLMKSTEKWMREKGFNEAYLSTDD---- 126 (225)
T ss_pred cceeeeeccccCCC---------------CCceeEEEEEEEehhhccccHHHHHHHHHHHHHHHhhhhheeeeccc----
Confidence 78889888765422 34558899999999999999999999999999999999999998865
Q ss_pred hHhHHhhCCCeEeecCC
Q 026519 193 ATKLYKGQGFKCVKVPE 209 (237)
Q Consensus 193 a~~fy~k~GF~~~~~~~ 209 (237)
-.+||+++||+...-+.
T Consensus 127 Q~~FYe~lGYe~c~Pi~ 143 (225)
T KOG3397|consen 127 QCRFYESLGYEKCDPIV 143 (225)
T ss_pred chhhhhhhcccccCcee
Confidence 47799999999876443
No 59
>KOG4144 consensus Arylalkylamine N-acetyltransferase [General function prediction only]
Probab=99.12 E-value=3.5e-11 Score=85.15 Aligned_cols=178 Identities=16% Similarity=0.108 Sum_probs=100.8
Q ss_pred CCCCCCceeeeccccCHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhccccccccceeeEEEEECCccceeEEeecC
Q 026519 18 XXXSPEIVVREARIEDIWEVAETHCSCFFPNYTFPLDLMLRVDRLVAMLSGFTVQHGTRRTCLVAVVGSRMDETFFLGSE 97 (237)
Q Consensus 18 ~~~~~~l~iR~~~~~D~~~l~~l~~~~f~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~v~~~ 97 (237)
|....++.|||..++|+.++..|....|+++-.. .+.-..+++... |+.+.- +.+. .....
T Consensus 6 ~~~p~~~~irp~i~e~~q~~~~Lea~~FPe~era--sfeii~~r~i~~------pevc~g--lf~~----~~h~~----- 66 (190)
T KOG4144|consen 6 PLKPEAPRIRPGIPESCQRRHTLEASEFPEDERA--SFEIIRERFISV------PEVCPG--LFDE----IRHFL----- 66 (190)
T ss_pred CCCcccccCCCCChHHHHHHhccccccCChhHHH--HHHHHHHHHhcc------hhhcch--hhhh----HHhhh-----
Confidence 4444567899999999999999988888554221 222222233221 111100 0000 00000
Q ss_pred cccccccCCcccccCCceEEEEEeccccCccCCCCCccccccCCCCCeeEEEEEEecccccccChHHHHHHHHHHHHHHc
Q 026519 98 DFKVGGLDGKFSLHRGYVAGILTVDTVADFLPRKGPLRQRSSFHRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGW 177 (237)
Q Consensus 98 ~~~~~g~~~~~~~~~~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~ 177 (237)
-++.+.+||++.-...+.......... .+...+.-.+|+.++|+|+||.+|+|..|+...++..-.+
T Consensus 67 -----------~~~~~tLIghIigs~~~~E~lt~ESm~--kh~s~g~ni~iHsl~Ihpa~rk~g~a~~Ll~~ylq~l~~q 133 (190)
T KOG4144|consen 67 -----------TLCEGTLIGHIIGSLWDKERLTQESMT--KHRSGGHNIHIHSLAIHPAFRKQGRAPILLWRYLQHLGSQ 133 (190)
T ss_pred -----------hhccccceehhhcccCcchhhhHHHHh--hhhcCCcceeEEEEEecHHHHhcCcchhHHHHHHHHhhcC
Confidence 022467777776543322111111110 1112334489999999999999999999999988888766
Q ss_pred CC-cEEEEEeecCCcchHhHHhhCCCeEeecCCCCCCCCCCCCCCceeEeeeeccC
Q 026519 178 GC-RSIALHCDFNNLGATKLYKGQGFKCVKVPEGANWPQPKNSPDVKFKFMMKLLK 232 (237)
Q Consensus 178 g~-~~i~l~~~~~N~~a~~fy~k~GF~~~~~~~~~~~~~~~~~~~~~~~~m~k~L~ 232 (237)
.+ .++.|.+. ++-++|||+.||+.++.- ........+...+++.|.+.+-
T Consensus 134 ~i~~r~~Li~h---~pLvPFYEr~gFk~vgp~--~~~~~~k~F~e~~w~dm~h~~l 184 (190)
T KOG4144|consen 134 PIVRRAALICH---DPLVPFYERFGFKAVGPC--AITVGSKTFMELHWSDMGHPFL 184 (190)
T ss_pred ccccceeeeec---CCccchhHhcCceeeccc--ccccccchhHHHHHHHhcCHHH
Confidence 33 34555443 478999999999999952 1111122233444555655543
No 60
>COG3818 Predicted acetyltransferase, GNAT superfamily [General function prediction only]
Probab=98.96 E-value=8.9e-09 Score=71.04 Aligned_cols=68 Identities=21% Similarity=0.237 Sum_probs=60.9
Q ss_pred CCCeeEEEEEEecccccccChHHHHHHHHHHHHHHcCCcEEEEEee--cCCcchHhHHhhCCCeEeecCC
Q 026519 142 RTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALHCD--FNNLGATKLYKGQGFKCVKVPE 209 (237)
Q Consensus 142 ~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~g~~~i~l~~~--~~N~~a~~fy~k~GF~~~~~~~ 209 (237)
-.+..|++.+.|....||+|+|++|.+.+.++++..|+..+.+.|+ +.|+++..|...+||..+|...
T Consensus 81 Ye~F~YvDRvVVA~~aRGrG~aRalY~Dlf~~Ae~agy~~~tCEVn~DppnpasdaFHaalGF~eVG~a~ 150 (167)
T COG3818 81 YENFFYVDRVVVASRARGRGVARALYADLFSYAELAGYPYLTCEVNLDPPNPASDAFHAALGFHEVGQAT 150 (167)
T ss_pred CCceEEEEEEEEEecccccchHHHHHHHHHHHHHhcCCceEEEEecCCCCChHHHHHhhhcCceEccceE
Confidence 4678999999999999999999999999999999889888777754 5699999999999999999644
No 61
>TIGR01211 ELP3 histone acetyltransferase, ELP3 family. The Saccharomyces cerevisiae member YPL086C has been characterized in vitro as an N-terminal acetyltransferase for all four core histones. It is a component of the RNA polymerase II holoenzyme, designated Elp3p for Elongator Protein 3. Members of this family are found in eukaryotes and archaea. These proteins are part of the larger set of GNAT acetyltransferases.
Probab=98.93 E-value=6.2e-09 Score=90.37 Aligned_cols=85 Identities=19% Similarity=0.337 Sum_probs=63.2
Q ss_pred ccCCceEEEEEeccccCccCCCCCccccccCCCCCeeEEEEEE-----------ecccccccChHHHHHHHHHHHHHHcC
Q 026519 110 LHRGYVAGILTVDTVADFLPRKGPLRQRSSFHRTGIAYISNVA-----------VREKFRRKGIAKRLIAKAEAQARGWG 178 (237)
Q Consensus 110 ~~~~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~-----------V~p~~rg~Gig~~Ll~~~~~~~~~~g 178 (237)
.+++.++|++.+.......... .....+.|..+. ++++|||+|+|+.||+++++.+++.|
T Consensus 420 ~~~~~l~G~lrlr~~~~~~~~~---------~~~~~a~IrelhV~G~~~~~~~~~~~~~rg~GiG~~Ll~~ae~~Ar~~G 490 (522)
T TIGR01211 420 PKNDILIGFLRLRFPSEPAHRK---------EVDATALVRELHVYGSEVPIGERGDDEWQHRGYGRRLLEEAERIAAEEG 490 (522)
T ss_pred CCCCeEEEEEEEecCccccccc---------ccCCCceEEEEEEeeeeccccccCChhHhCcCHHHHHHHHHHHHHHHCC
Confidence 3457899999997653211100 011234444444 45899999999999999999999999
Q ss_pred CcEEEEEeecCCcchHhHHhhCCCeEee
Q 026519 179 CRSIALHCDFNNLGATKLYKGQGFKCVK 206 (237)
Q Consensus 179 ~~~i~l~~~~~N~~a~~fy~k~GF~~~~ 206 (237)
+..+.+.+ |..|.+||+|+||+..+
T Consensus 491 ~~~i~v~s---~~~A~~FY~klGf~~~g 515 (522)
T TIGR01211 491 SEKILVIS---GIGVREYYRKLGYELDG 515 (522)
T ss_pred CCEEEEee---CchHHHHHHHCCCEEEc
Confidence 99987743 67899999999999887
No 62
>COG2153 ElaA Predicted acyltransferase [General function prediction only]
Probab=98.90 E-value=1.1e-08 Score=72.14 Aligned_cols=95 Identities=17% Similarity=0.114 Sum_probs=70.5
Q ss_pred CCceEEEEEeccccCccCCCCCccccccCCCCCeeEEEEEEecccccccChHHHHHHHHHHHHHHc-CCcEEEEEeecCC
Q 026519 112 RGYVAGILTVDTVADFLPRKGPLRQRSSFHRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGW-GCRSIALHCDFNN 190 (237)
Q Consensus 112 ~~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~-g~~~i~l~~~~~N 190 (237)
++++++++.+...... ...+.|+.++|+|++||+|+|.+||..+++.+.+. .-+.++|..-.
T Consensus 58 ~g~LvAyaRLl~~~~~---------------~~~~~iGRV~v~~~~RG~glG~~Lm~~AL~~~~~~~p~~~v~l~AQa-- 120 (155)
T COG2153 58 DGELVAYARLLPPGAE---------------YEEVSIGRVIVSPAARGQGLGQQLMEKALETAGREWPDKPVYLGAQA-- 120 (155)
T ss_pred CCeEEEEEecCCCCCC---------------cCceeeeeEEECHhhhccchhHHHHHHHHHHHHhhCCCCCeEEehHH--
Confidence 4899999988654221 11266999999999999999999999999999876 34557776544
Q ss_pred cchHhHHhhCCCeEeecCCCCCCCCCCCCCCceeEeeeeccC
Q 026519 191 LGATKLYKGQGFKCVKVPEGANWPQPKNSPDVKFKFMMKLLK 232 (237)
Q Consensus 191 ~~a~~fy~k~GF~~~~~~~~~~~~~~~~~~~~~~~~m~k~L~ 232 (237)
-...||.+.||+.++. ....++..=+-|++...
T Consensus 121 -hLq~fYa~~GFv~~~e--------~yledGIpHv~M~r~~~ 153 (155)
T COG2153 121 -HLQDFYASFGFVRVGE--------EYLEDGIPHVGMIREVI 153 (155)
T ss_pred -HHHHHHHHhCcEEcCc--------hhhcCCCCchhhhhccc
Confidence 5789999999999985 23344444455655543
No 63
>PF13718 GNAT_acetyltr_2: GNAT acetyltransferase 2; PDB: 2ZPA_B.
Probab=98.75 E-value=6.5e-08 Score=73.13 Aligned_cols=85 Identities=20% Similarity=0.247 Sum_probs=54.0
Q ss_pred CCCeeEEEEEEecccccccChHHHHHHHHHHHHH-------------------------HcCCcEEEEEeecCCcchHhH
Q 026519 142 RTGIAYISNVAVREKFRRKGIAKRLIAKAEAQAR-------------------------GWGCRSIALHCDFNNLGATKL 196 (237)
Q Consensus 142 ~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~-------------------------~~g~~~i~l~~~~~N~~a~~f 196 (237)
.-..+.|.+|+|+|++|++|+|++|++.+++++. ..++..+-..... ++.-.+|
T Consensus 87 ~l~g~RIvRIAvhP~~q~~G~Gs~lL~~l~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~vDylGtSFG~-t~~Ll~F 165 (196)
T PF13718_consen 87 QLSGARIVRIAVHPDLQRMGYGSRLLQQLEQYAEGKIPSLSEQDKEKLPPLLSKLSDRRPPGVDYLGTSFGA-TPELLKF 165 (196)
T ss_dssp GSEEEEEEEEEE-CCC-SSSHHHHHHHHHHHT-----------------------------S-SEEEEEEE---HHHHHH
T ss_pred hhcceeEEEEEEChhhhcCCHHHHHHHHHHHHHhhhcccccccccccccccccccccccccCCCEEEeccCC-CHHHHHH
Confidence 4467889999999999999999999999999993 4466654443322 3567999
Q ss_pred HhhCCCeEeecCCCCCCCCCCCCCCceeEeeeeccC
Q 026519 197 YKGQGFKCVKVPEGANWPQPKNSPDVKFKFMMKLLK 232 (237)
Q Consensus 197 y~k~GF~~~~~~~~~~~~~~~~~~~~~~~~m~k~L~ 232 (237)
|.|+||..+...... ...-+....+|+|.|+
T Consensus 166 W~k~gf~pv~l~~~~-----n~~SGe~S~imlr~ls 196 (196)
T PF13718_consen 166 WQKNGFVPVYLGQTR-----NEASGEHSAIMLRPLS 196 (196)
T ss_dssp HHCTT-EEEEE-SS-------TTT---EEEEEEE--
T ss_pred HHHCCcEEEEEecCc-----ccccCceeeeEEeecC
Confidence 999999999865443 2234556788888774
No 64
>PF08444 Gly_acyl_tr_C: Aralkyl acyl-CoA:amino acid N-acyltransferase, C-terminal region; InterPro: IPR013652 This entry represents mammalian-specific glycine N-acyltransferase (also called aralkyl acyl-CoA:amino acid N-acyltransferase; 2.3.1.13 from EC). Mitochondrial acyltransferases catalyse the transfer of an acyl group from acyl-CoA to the N terminus of glycine to produce N-acylglycine. These enzymes can conjugate a multitude of substrates to form a variety of N-acylglycines. The CoA derivatives of a number of aliphatic and aromatic acids, but not phenylacetyl-CoA or (indol-3-yl)acetyl-CoA, can act as donor [, ].
Probab=98.71 E-value=5e-08 Score=63.64 Aligned_cols=61 Identities=16% Similarity=0.207 Sum_probs=56.8
Q ss_pred eeEEEEEEecccccccChHHHHHHHHHHHHHHcCCcEEEEEeecCCcchHhHHhhCCCeEee
Q 026519 145 IAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDFNNLGATKLYKGQGFKCVK 206 (237)
Q Consensus 145 ~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~g~~~i~l~~~~~N~~a~~fy~k~GF~~~~ 206 (237)
++++..-++.|+|||+|+.+.++....+++.++|+. ++.+|..+|+.++++-.++||...-
T Consensus 19 tge~rmgyTlPeyR~~G~~~~v~~~~~~~L~~~g~P-~Y~hv~~~N~~~~r~~~~lg~~~~p 79 (89)
T PF08444_consen 19 TGEMRMGYTLPEYRGQGLMSQVMYHLAQYLHKLGFP-FYGHVDEDNEASQRLSKSLGFIFMP 79 (89)
T ss_pred cccccccccCHhHhcCCHHHHHHHHHHHHHHHCCCC-eEeehHhccHHHHHHHHHCCCeecC
Confidence 377888899999999999999999999999999996 5999999999999999999999764
No 65
>PF12746 GNAT_acetyltran: GNAT acetyltransferase; PDB: 3G3S_B.
Probab=98.63 E-value=4.7e-07 Score=72.00 Aligned_cols=61 Identities=21% Similarity=0.212 Sum_probs=48.4
Q ss_pred CCeeEEEEEEecccccccChHHHHHHHHHHHHHHcCCcEEEEEeecCCcchHhHHhhCCCeEeec
Q 026519 143 TGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDFNNLGATKLYKGQGFKCVKV 207 (237)
Q Consensus 143 ~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~g~~~i~l~~~~~N~~a~~fy~k~GF~~~~~ 207 (237)
.+..+|. |.++|+|||+|||+.+...++..|.++|+.- ..+..|.+++++-+|+||+....
T Consensus 187 ~~~~EI~-I~T~~~yR~kGLA~~~aa~~I~~Cl~~~l~P---~WDc~N~~S~~lA~kLGf~~~~~ 247 (265)
T PF12746_consen 187 ENGIEID-IETHPEYRGKGLATAVAAAFILECLENGLYP---SWDCHNLASIALAEKLGFHFDFE 247 (265)
T ss_dssp TTEEEEE-EEE-CCCTTSSHHHHHHHHHHHHHHHTT-EE---E-EESSHHHHHHHHHCT--EEEE
T ss_pred CCEEEEE-EEECHHhhcCCHHHHHHHHHHHHHHHCCCCc---CeeCCCHHHHHHHHHcCCcccce
Confidence 3446777 9999999999999999999999999997643 44457999999999999999874
No 66
>PF14542 Acetyltransf_CG: GCN5-related N-acetyl-transferase; PDB: 2H5M_A 2Q44_A 1XMT_A 2Q4Y_A 2IL4_A 2EVN_A 1R57_A.
Probab=98.59 E-value=5.6e-07 Score=58.20 Aligned_cols=66 Identities=26% Similarity=0.293 Sum_probs=51.1
Q ss_pred CCceEEEEEeccccCccCCCCCccccccCCCCCeeEEEEEEecccccccChHHHHHHHHHHHHHHcCCcEEEEEeecCCc
Q 026519 112 RGYVAGILTVDTVADFLPRKGPLRQRSSFHRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDFNNL 191 (237)
Q Consensus 112 ~~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~g~~~i~l~~~~~N~ 191 (237)
+|+.+|.+.... .++.+.|.+..|.|++||+|||+.|++.++++++++|.+. .+..+
T Consensus 7 ~g~~~a~l~Y~~------------------~~~~~~i~hT~V~~~~rGqGia~~L~~~~l~~a~~~~~kv-----~p~C~ 63 (78)
T PF14542_consen 7 DGEEIAELTYRE------------------DGGVIVITHTEVPPELRGQGIAKKLVEAALDYARENGLKV-----VPTCS 63 (78)
T ss_dssp STTEEEEEEEEE------------------SSSEEEEEEEEE-CSSSTTTHHHHHHHHHHHHHHHTT-EE-----EETSH
T ss_pred CCEEEEEEEEEe------------------CCCEEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCEE-----EEECH
Confidence 477889888854 3556889999999999999999999999999999998743 34445
Q ss_pred chHhHHhhC
Q 026519 192 GATKLYKGQ 200 (237)
Q Consensus 192 ~a~~fy~k~ 200 (237)
-+..+++++
T Consensus 64 y~~~~~~~h 72 (78)
T PF14542_consen 64 YVAKYFRRH 72 (78)
T ss_dssp HHHHHHHH-
T ss_pred HHHHHHHhC
Confidence 677777664
No 67
>cd04301 NAT_SF N-Acyltransferase superfamily: Various enzymes that characteristically catalyze the transfer of an acyl group to a substrate. NAT (N-Acyltransferase) is a large superfamily of enzymes that mostly catalyze the transfer of an acyl group to a substrate and are implicated in a variety of functions, ranging from bacterial antibiotic resistance to circadian rhythms in mammals. Members include GCN5-related N-Acetyltransferases (GNAT) such as Aminoglycoside N-acetyltransferases, Histone N-acetyltransferase (HAT) enzymes, and Serotonin N-acetyltransferase, which catalyze the transfer of an acetyl group to a substrate. The kinetic mechanism of most GNATs involves the ordered formation of a ternary complex: the reaction begins with Acetyl Coenzyme A (AcCoA) binding, followed by binding of substrate, then direct transfer of the acetyl group from AcCoA to the substrate, followed by product and subsequent CoA release. Other family members include Arginine/ornithine N-succinyltransfera
Probab=98.55 E-value=5.3e-07 Score=55.04 Aligned_cols=58 Identities=31% Similarity=0.534 Sum_probs=48.4
Q ss_pred CCceEEEEEeccccCccCCCCCccccccCCCCCeeEEEEEEecccccccChHHHHHHHHHHHHHHcCCcEEEE
Q 026519 112 RGYVAGILTVDTVADFLPRKGPLRQRSSFHRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIAL 184 (237)
Q Consensus 112 ~~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~g~~~i~l 184 (237)
+++++|++.+..... ..+.+++..++|+|+|||+|+|+.+++.+++++.+.|+..+.+
T Consensus 7 ~~~~ig~~~~~~~~~---------------~~~~~~l~~~~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~ 64 (65)
T cd04301 7 DGEIVGFASLSPDGS---------------GGDTAYIGDLAVLPEYRGKGIGSALLEAAEEEARERGAKRLRL 64 (65)
T ss_pred CCEEEEEEEEEecCC---------------CCccEEEEEEEECHHHcCcCHHHHHHHHHHHHHHHcCCcEEEe
Confidence 378999998865321 1345889999999999999999999999999999988888765
No 68
>COG1444 Predicted P-loop ATPase fused to an acetyltransferase [General function prediction only]
Probab=98.50 E-value=7.1e-07 Score=79.76 Aligned_cols=85 Identities=22% Similarity=0.230 Sum_probs=64.4
Q ss_pred CCeeEEEEEEecccccccChHHHHHHHHHHHHHHcCCcEEEEEeecCCcchHhHHhhCCCeEeecCCCCCCCCCCCCCCc
Q 026519 143 TGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDFNNLGATKLYKGQGFKCVKVPEGANWPQPKNSPDV 222 (237)
Q Consensus 143 ~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~g~~~i~l~~~~~N~~a~~fy~k~GF~~~~~~~~~~~~~~~~~~~~ 222 (237)
-..+.|..|+|+|++|++|||++|++.++++++ .|+..+-..-. -++.-.+||.|+||..+...+..+ -.-+.
T Consensus 529 l~G~RIvRIAvhPe~q~~GiGsrlL~~l~~~a~-~~~DwlgvsFG-~t~~L~rFW~rnGF~pVhls~~rn-----~~SGe 601 (758)
T COG1444 529 LVGWRIVRIAVHPELQRMGIGSRLLALLIEEAR-KGLDWLGVSFG-YTEELLRFWLRNGFVPVHLSPTRN-----ASSGE 601 (758)
T ss_pred cceeeEEEEEeCHHHHhcCHHHHHHHHHHHHHh-cCCCEEeeccC-CCHHHHHHHHHcCeEEEEecCccC-----cCCCc
Confidence 345889999999999999999999999999997 35655433322 246789999999999998766543 22344
Q ss_pred eeEeeeeccCCC
Q 026519 223 KFKFMMKLLKAP 234 (237)
Q Consensus 223 ~~~~m~k~L~~~ 234 (237)
...+|+|.|+..
T Consensus 602 ys~i~lkpLs~~ 613 (758)
T COG1444 602 YTAIVLKPLSDA 613 (758)
T ss_pred eeEEEEecCCHH
Confidence 567788887643
No 69
>KOG4135 consensus Predicted phosphoglucosamine acetyltransferase [Carbohydrate transport and metabolism]
Probab=98.25 E-value=5.2e-06 Score=58.87 Aligned_cols=63 Identities=17% Similarity=0.128 Sum_probs=57.0
Q ss_pred eeEEEEEEecccccccChHHHHHHHHHHHHHHc-CCcEEEEEeecCCcchHhHHhhCCCeEeec
Q 026519 145 IAYISNVAVREKFRRKGIAKRLIAKAEAQARGW-GCRSIALHCDFNNLGATKLYKGQGFKCVKV 207 (237)
Q Consensus 145 ~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~-g~~~i~l~~~~~N~~a~~fy~k~GF~~~~~ 207 (237)
.+++.-+...|..||+|+|+..+..++.|+.+. ++......+..+|.+++++|.|.+|..+..
T Consensus 107 ~gE~EvMIAEP~~RgKG~G~eav~~ml~y~~s~l~l~Ky~vkig~~nk~sl~lFkk~~f~q~~~ 170 (185)
T KOG4135|consen 107 TGEVEVMIAEPRGRGKGIGTEAVRAMLAYAYSVLKLDKYEVKIGMDNKPSLRLFKKFLFTQVFY 170 (185)
T ss_pred eeeEEEEEecccccCCCccHHHHHHHHHHHHHHhhhheEEEEecCCCchHHHHHHHhhheeeee
Confidence 466776778999999999999999999999864 888889999999999999999999999986
No 70
>PF04958 AstA: Arginine N-succinyltransferase beta subunit; InterPro: IPR007041 Arginine N-succinyltransferase catalyses the transfer of succinyl-CoA to arginine to produce succinylarginine. This is the first step in arginine catabolism via the arginine succinyltransferase pathway. Six major L-arginine-degrading pathways have been described for prokaryotes []. Many bacteria arginine succinyltransferase 2.3.1.109 from EC, which is the AstA protein of the succinyltransferase (ast) pathway operon consists of five genes. In a few species, such as Pseudomonas aeruginosa, a tandem gene pair encodes alpha and beta subunits of a heterodimer that is designated arginine and ornithine succinyltransferase (AOST). This entry represents the family of proteins that make up the beta subunit of the heterodimer of Ast and AOST.; GO: 0008791 arginine N-succinyltransferase activity, 0006527 arginine catabolic process; PDB: 1YLE_A.
Probab=98.23 E-value=3.8e-05 Score=63.03 Aligned_cols=161 Identities=13% Similarity=0.080 Sum_probs=78.6
Q ss_pred CceeeeccccCHHHHHHHhhccCC--CCCCCCchhHHHHHHHHHHHhccccccccceeeEEEEECCccceeEEeecCccc
Q 026519 23 EIVVREARIEDIWEVAETHCSCFF--PNYTFPLDLMLRVDRLVAMLSGFTVQHGTRRTCLVAVVGSRMDETFFLGSEDFK 100 (237)
Q Consensus 23 ~l~iR~~~~~D~~~l~~l~~~~f~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~v~~~~~~ 100 (237)
|+.|||++.+|+++|.+|...+=. .+.+. +.....+++..-...|+.... .... ....++|.++
T Consensus 1 M~viRp~~~~Dl~aL~~LA~~sg~G~TsLP~--d~~~L~~rI~~S~~sFa~~~~--------~~~~-~~~YlfVLED--- 66 (342)
T PF04958_consen 1 MLVIRPARPSDLDALYALARESGPGFTSLPP--DREALAERIERSERSFAGRDV--------DFPG-DEGYLFVLED--- 66 (342)
T ss_dssp -EEEEE--GGGHHHHHHHHHHS-TT-TTS-S---HHHHHHHHHHHHHHHH-TT------------S---EEEEEEEE---
T ss_pred CeEEecCchhhHHHHHHHHHHcCCCcccCCC--CHHHHHHHHHHHHHHhhcccc--------CCCC-ccceEEEEEe---
Confidence 578999999999999999887732 22222 223333334333333322110 0000 1122333332
Q ss_pred ccccCCcccccCCceEEEEEeccccCccCCCCCcccc-------------------ccCCCCCeeEEEEEEecccccccC
Q 026519 101 VGGLDGKFSLHRGYVAGILTVDTVADFLPRKGPLRQR-------------------SSFHRTGIAYISNVAVREKFRRKG 161 (237)
Q Consensus 101 ~~g~~~~~~~~~~~ivG~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~i~~l~V~p~~rg~G 161 (237)
.+.|+|+|++.+........+....+.. ...+-...-+|+.+.++|+||+.|
T Consensus 67 ---------~~tg~vvGts~I~a~vG~~~PfY~yr~~~~vh~S~~L~v~~~~~~L~L~~d~tG~sEl~tLfL~p~~R~~~ 137 (342)
T PF04958_consen 67 ---------TETGEVVGTSAIEAAVGLDEPFYSYRVSTLVHASRELGVRNRHETLTLSNDYTGCSELCTLFLDPDYRGGG 137 (342)
T ss_dssp ---------TTT--EEEEEEEESSTTSSS---EEEEEEEEEEETTTTEEEEEEEEEEE-TTTTSEEEEEEEE-GGGTTSH
T ss_pred ---------cCCCcEEEEEeEEeccCCCCCcEEEEcCceeEcCcccCCccceeeEeeecCCCCCeeeEEEEECHHHcCCc
Confidence 1248899988885433222222111111 233346778999999999999999
Q ss_pred hHHHHHHHHHHHHHHc--CC-cEEEEEee--cCCcchHhHHhhCCCeEee
Q 026519 162 IAKRLIAKAEAQARGW--GC-RSIALHCD--FNNLGATKLYKGQGFKCVK 206 (237)
Q Consensus 162 ig~~Ll~~~~~~~~~~--g~-~~i~l~~~--~~N~~a~~fy~k~GF~~~~ 206 (237)
.|+.|-+.-.=.+.+. -+ ..+..... .+-..--+||+.+|=+..+
T Consensus 138 ~G~lLSr~RfLFiA~~~~rF~~~viAElrG~~De~G~SPFWdalG~~FF~ 187 (342)
T PF04958_consen 138 NGRLLSRSRFLFIAQHRERFADRVIAELRGVSDEDGRSPFWDALGRHFFD 187 (342)
T ss_dssp HHHHHHHHHHHHHHH-GGGS-SEEEEE--B---TT---HHHHHTGGGTS-
T ss_pred hHHHHHHHHHHHHHhChhhcchheeeeccCCcCCCCCCchHHHhhccccC
Confidence 9999887765555432 22 22332211 1223568899999866554
No 71
>PF12568 DUF3749: Acetyltransferase (GNAT) domain; InterPro: IPR024612 This domain is found in uncharacterised proteins from Gammaproteobacteria, and is approximately 40 amino acids in length. It contains two completely conserved residues (D and I) that may be functionally important. Proteins having this domain are frequently annotated as acetyltransferases of the GNAT family; however there is little accompanying annotation to confirm this.; PDB: 2K5T_A.
Probab=98.15 E-value=1.8e-05 Score=55.17 Aligned_cols=74 Identities=20% Similarity=0.232 Sum_probs=51.5
Q ss_pred CceEEEEEeccccCccCCCCCccccccCCCCCeeEEEEEEecccccccChHHHHHHHHHHHHHHcCCcEEEEEeec----
Q 026519 113 GYVAGILTVDTVADFLPRKGPLRQRSSFHRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDF---- 188 (237)
Q Consensus 113 ~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~g~~~i~l~~~~---- 188 (237)
++++|.+.+.. .++.+.|..++|.+--|++|+|+.|++.+++.+. +++...+....
T Consensus 47 dRlLgAv~v~~------------------~~~~~~L~~l~VRevTRrRGVG~yLlee~~rq~p--~i~~w~l~~~~~~~~ 106 (128)
T PF12568_consen 47 DRLLGAVKVTI------------------SGQQAELSDLCVREVTRRRGVGLYLLEEVLRQLP--DIKHWWLADEGVEPQ 106 (128)
T ss_dssp TEEEEEEEEEE------------------ETTEEEEEEEEE-TT-SSSSHHHHHHHHHHHHS---S--EEEE--TT-S--
T ss_pred hheeeeEEEEE------------------cCcceEEeeEEEeeccccccHHHHHHHHHHHHCC--CCcEEEEecCCCccc
Confidence 89999998864 3556999999999999999999999999998884 55665554332
Q ss_pred CCcchHhHHhhCCCeEee
Q 026519 189 NNLGATKLYKGQGFKCVK 206 (237)
Q Consensus 189 ~N~~a~~fy~k~GF~~~~ 206 (237)
+-.....|+..+||....
T Consensus 107 ~~~~~~~Fm~a~GF~~~~ 124 (128)
T PF12568_consen 107 DRAVMAAFMQACGFSAQS 124 (128)
T ss_dssp THHHHHHHHHHHT-EE-S
T ss_pred chHHHHHHHHHcCccccC
Confidence 123456899999996554
No 72
>COG2388 Predicted acetyltransferase [General function prediction only]
Probab=98.05 E-value=2e-05 Score=52.91 Aligned_cols=52 Identities=31% Similarity=0.392 Sum_probs=43.3
Q ss_pred CceEEEEEeccccCccCCCCCccccccCCCCCeeEEEEEEecccccccChHHHHHHHHHHHHHHcCCcE
Q 026519 113 GYVAGILTVDTVADFLPRKGPLRQRSSFHRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRS 181 (237)
Q Consensus 113 ~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~g~~~ 181 (237)
|..+|.+..... ..+...|.+-.|.+++||+|+|+.|+..+++.+++.|.+.
T Consensus 24 G~~~~e~~y~~~-----------------~~~~i~i~HT~V~d~lrGqGia~~L~~~al~~ar~~g~ki 75 (99)
T COG2388 24 GEVIGEATYYDR-----------------GENLIIIDHTYVPDELRGQGIAQKLVEKALEEAREAGLKI 75 (99)
T ss_pred CcEEEEEEEecC-----------------CCCEEEEecCcCCHHHcCCcHHHHHHHHHHHHHHHcCCeE
Confidence 667777776432 3466889999999999999999999999999999988743
No 73
>PRK10456 arginine succinyltransferase; Provisional
Probab=98.04 E-value=7.1e-05 Score=61.28 Aligned_cols=160 Identities=13% Similarity=0.117 Sum_probs=84.3
Q ss_pred CceeeeccccCHHHHHHHhhccCCCCCCCCc-hhHHHHHHHHHHHhccccccccceeeEEEEECCccceeEEeecCcccc
Q 026519 23 EIVVREARIEDIWEVAETHCSCFFPNYTFPL-DLMLRVDRLVAMLSGFTVQHGTRRTCLVAVVGSRMDETFFLGSEDFKV 101 (237)
Q Consensus 23 ~l~iR~~~~~D~~~l~~l~~~~f~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~v~~~~~~~ 101 (237)
|+.|||++..|+++|.+|...+=. .+..-. +......++..-...|... ........++|.++.
T Consensus 1 M~vvRpv~~~Dl~aL~~LA~~sG~-G~TsLP~d~~~L~~rI~~S~~sF~~~-----------~~~~~~~YlFVLED~--- 65 (344)
T PRK10456 1 MMVIRPVERSDLAALMQLAGKTGG-GLTSLPANEATLAARIERALKTWQGE-----------LPKSEQGYVFVLEDS--- 65 (344)
T ss_pred CeEEecCccccHHHHHHHHHHcCC-CcccCCCCHHHHHHHHHHHHHHhcCc-----------CCCCCccEEEEEEeC---
Confidence 478999999999999999887732 111111 2223333333333333111 011122333343321
Q ss_pred cccCCcccccCCceEEEEEeccccCccCCCCCcccc-------------------ccCCCCCeeEEEEEEecccccccCh
Q 026519 102 GGLDGKFSLHRGYVAGILTVDTVADFLPRKGPLRQR-------------------SSFHRTGIAYISNVAVREKFRRKGI 162 (237)
Q Consensus 102 ~g~~~~~~~~~~~ivG~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~i~~l~V~p~~rg~Gi 162 (237)
+.|+++|++.+........+....+.. ...+-...-+|+.+.++|+||+.|.
T Consensus 66 ---------~tg~vvGts~I~a~vG~~~PfY~yr~~~~vhaS~~L~v~~~~~~L~l~nd~tG~sElctLfl~p~~R~~~~ 136 (344)
T PRK10456 66 ---------ETGTVAGICAIEVAVGLNDPWYNYRVGTLVHASKELNVYNALPTLFLSNDHTGSSELCTLFLDPDWRKEGN 136 (344)
T ss_pred ---------CCCcEEEEEeEEecccCCCCCEEEEcCceeecCcccCCceeeeeEEeeccCCCCceeEEEEECHHHcCCCc
Confidence 247888888774332221111111111 2233457788999999999999999
Q ss_pred HHHHHHHHHHHHHHc--CC-cEEEEE--eecCCcchHhHHhhCCCeEee
Q 026519 163 AKRLIAKAEAQARGW--GC-RSIALH--CDFNNLGATKLYKGQGFKCVK 206 (237)
Q Consensus 163 g~~Ll~~~~~~~~~~--g~-~~i~l~--~~~~N~~a~~fy~k~GF~~~~ 206 (237)
|+.|-+.-.=.+.+. -+ ..+... =..+....-+||+.+|=+..+
T Consensus 137 G~LLSr~RfLFiA~~~erF~~~viAEmRG~~De~G~SPFWd~lg~hFF~ 185 (344)
T PRK10456 137 GYLLSKSRFMFMAAFRDKFNDKVVAEMRGVIDEHGYSPFWQSLGKRFFS 185 (344)
T ss_pred hhHHHHHHHHHHHhhHhhhhhhhheeccCccCCCCCCccHHHhhccccC
Confidence 988876543333221 11 111111 112223567788888866655
No 74
>COG4552 Eis Predicted acetyltransferase involved in intracellular survival and related acetyltransferases [General function prediction only]
Probab=97.93 E-value=1.9e-05 Score=64.13 Aligned_cols=59 Identities=25% Similarity=0.330 Sum_probs=52.7
Q ss_pred CeeEEEEEEecccccccChHHHHHHHHHHHHHHcCCcEEEEEeecCCcchHhHHhhCCCeEeec
Q 026519 144 GIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDFNNLGATKLYKGQGFKCVKV 207 (237)
Q Consensus 144 ~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~g~~~i~l~~~~~N~~a~~fy~k~GF~~~~~ 207 (237)
+...|..+++.|+|||+|..+.|+.+.++..++.|+....|+. .+.+||+|.||+....
T Consensus 69 ~t~GIa~Vas~P~~R~~G~~~~Ll~~sLre~~~kG~p~s~L~P-----~s~~iYrKfGye~asn 127 (389)
T COG4552 69 PTAGIAGVASAPTYRRRGALRALLAHSLREIARKGYPVSALHP-----FSGGIYRKFGYEYASN 127 (389)
T ss_pred eccceEEEEechhhccCcHHHHHHHHHHHHHHHcCCeeEEecc-----CchhhHhhccccccce
Confidence 4578888999999999999999999999999999999888854 5688999999998875
No 75
>COG0454 WecD Histone acetyltransferase HPA2 and related acetyltransferases [Transcription / General function prediction only]
Probab=97.90 E-value=1.5e-05 Score=54.69 Aligned_cols=44 Identities=34% Similarity=0.437 Sum_probs=40.4
Q ss_pred EEecccccccChHHHHHHHHHHHHHHcCCcEEEEEeecCCcchHhHHhhCCC
Q 026519 151 VAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDFNNLGATKLYKGQGF 202 (237)
Q Consensus 151 l~V~p~~rg~Gig~~Ll~~~~~~~~~~g~~~i~l~~~~~N~~a~~fy~k~GF 202 (237)
++|+|++||+|||+.|++.++++++..|+. .|..+..+|++.||
T Consensus 87 l~v~~~~rg~Gig~~Ll~~~~~~~~~~g~~--------~~~~~~~~~~~~~~ 130 (156)
T COG0454 87 LYVLPEYRGKGIGSALLEAALEWARKRGIS--------LNRLALEVYEKNGF 130 (156)
T ss_pred EEecchhhccchHHHHHHHHHHHHHHcCce--------ehHHHHHHHHhcCC
Confidence 899999999999999999999999987765 56788999999998
No 76
>TIGR03245 arg_AOST_alph arginine/ornithine succinyltransferase, alpha subunit. In some bacteria, including Pseudomonas aeruginosa, the astB gene (arginine N-succinyltransferase) is replaced by tandem paralogs that form a heterodimer. This heterodimer from P. aeruginosa is characterized as arginine and ornithine N-2 succinyltransferase (AOST). Members of this protein family represent the less widespread paralog, designated AruI, or arginine/ornithine succinyltransferase, alpha subunit.
Probab=97.76 E-value=0.00029 Score=57.62 Aligned_cols=159 Identities=13% Similarity=0.124 Sum_probs=82.7
Q ss_pred eeeeccccCHHHHHHHhhccCCCCCCCCc-hhHHHHHHHHHHHhccccccccceeeEEEEECCccceeEEeecCcccccc
Q 026519 25 VVREARIEDIWEVAETHCSCFFPNYTFPL-DLMLRVDRLVAMLSGFTVQHGTRRTCLVAVVGSRMDETFFLGSEDFKVGG 103 (237)
Q Consensus 25 ~iR~~~~~D~~~l~~l~~~~f~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~g 103 (237)
.|||++..|+++|.+|...+=. .+..-. +......++..-...|+.... .......++|.++.
T Consensus 1 viRpv~~~Dl~aL~~LA~~sG~-G~TsLP~d~~~L~~rI~~S~~sF~~~~~----------~~~~~~YlFVLEDt----- 64 (336)
T TIGR03245 1 IVRPSRFADLPAIERLANESAI-GVTSLPADRAKLGEKIAQSERSFAAEVS----------FVGEERYLFVLEDT----- 64 (336)
T ss_pred CcccCccccHHHHHHHHHHcCC-CcccCCCCHHHHHHHHHHHHHHHHhhcC----------CCCCccEEEEEEeC-----
Confidence 4899999999999999887732 111111 222333334333333321100 01112233333321
Q ss_pred cCCcccccCCceEEEEEeccccCccCCCCCcccc-------------------ccCCCCCeeEEEEEEecccccccChHH
Q 026519 104 LDGKFSLHRGYVAGILTVDTVADFLPRKGPLRQR-------------------SSFHRTGIAYISNVAVREKFRRKGIAK 164 (237)
Q Consensus 104 ~~~~~~~~~~~ivG~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~i~~l~V~p~~rg~Gig~ 164 (237)
+.|+++|++.+........+....+.. ...+-...-+|+.++++|+||+.|.|+
T Consensus 65 -------~tg~vvGts~I~a~vG~~~PfY~yr~~~~vhaS~~L~v~~~~~~L~l~nd~tG~sElctLfL~p~~R~~~~G~ 137 (336)
T TIGR03245 65 -------ETGKLLGTSSIVASAGYGEPFYSYRNDTLIHASRELKVNNKIHVLYMCHELTGSSLLCSFYVDPRLRKTEAAE 137 (336)
T ss_pred -------CCCcEEEEEeEEecccCCCCCEEEEcCceeecCcccCCccceeeEEeeccCCCCeeeEEEEECHHHcCCCchh
Confidence 247888888774332221111111111 233345778899999999999999998
Q ss_pred HHHHHHHHHHHHc--CC-cEEEEE--eecCCcchHhHHhhCCCeEee
Q 026519 165 RLIAKAEAQARGW--GC-RSIALH--CDFNNLGATKLYKGQGFKCVK 206 (237)
Q Consensus 165 ~Ll~~~~~~~~~~--g~-~~i~l~--~~~~N~~a~~fy~k~GF~~~~ 206 (237)
.|-+.-.=.+.+. -+ ..+... =..+...--+||+.+|=+..+
T Consensus 138 lLSr~RfLFiA~~~erF~~~viAEmrG~~De~G~SPFWd~lg~hFF~ 184 (336)
T TIGR03245 138 LLSRARLLFMAAHRERFQSRIIVEIQGVQDDNGDSPFWDAIGRHFFD 184 (336)
T ss_pred HHHHHHHHHHHhhHhhhhhhheeeccCccCCCCCCccHHHhhccccC
Confidence 8876544333221 11 111111 112223556788888876655
No 77
>PF00765 Autoind_synth: Autoinducer synthetase; InterPro: IPR001690 Bacterial species have many methods of controlling gene expression and cell growth. Regulation of gene expression in response to changes in cell density is termed quorum sensing [, ]. Quorum-sensing bacteria produce, release and respond to hormone-like molecules (autoinducers) that accumulate in the external environment as the cell population grows. Once a threshold of these molecules is reached, a signal transduction cascade is triggered that ultimately leads to behavioural changes in the bacterium []. Autoinducers are thus clearly important mediators of molecular communication. Conjugal transfer of Agrobacterium octopine-type Ti plasmids is activated by octopine, a metabolite released from plant tumours []. Octopine causes conjugal donors to secrete a pheromone, Agrobacterium autoinducer (AAI), and exogenous AAI further stimulates conjugation. The putative AAI synthase and an AAI-responsive transcriptional regulator have been found to be encoded by the Ti plasmid traI and traR genes, respectively. TraR and TraI are similar to the LuxR and LuxI regulatory proteins of Vibrio fischeri, and AAI is similar in structure to the diffusable V. fischeri autoinducer, the inducing ligand of LuxR. TraR activates target genes in the presence of AAI and also activates traR and traI themselves, creating two positive-feedback loops. TraR-AAI-mediated activation in wild-type Agrobacterium strains is enhanced by culturing on solid media, suggesting a possible role in cell density sensing []. Production of light by the marine bacterium V. fischeri and by recombinant hosts containing cloned lux genes is controlled by the density of the culture []. Density-dependent regulation of lux gene expression has been shown to require a locus consisting of the luxR and luxI genes. In these and other Gram-negative bacteria, N-(3-oxohexanoyl)-L-homoserine lactone (OHHL) acts as the autoinducer by binding to transcriptional regulatory proteins and activating them []. OHHL and related molecules, such as N-butanoyl- (BHL), N-hexanoyl- (HHL) and N-oxododecanoyl- (PAI) homoserine lactones, are produced by a family of proteins that share a high level of sequence similarity. Proteins which currently members of this family include: luxI from V. fischeri. ahyI and asaI from Aeromonas species, which synthesize BHL and whose targets are ahyR and asaR respectively. carI from Erwinia carotovora. The target of OHHL is carR which activates genes involved in the biosynthesis of carbapenem antibiotics. eagI from Enterobacter agglomerans. The target of OHHL is not yet known. esaI from Erwinia stewartii. expI from Erwinia carotovora. lasI from Pseudomonas aeruginosa, which synthesizes PAI and whose target is lasR which activates the transcription of the elastase gene. rhlI (or vsmI) from P. aeruginosa, which synthesizes BHL and HHL and whose target is rhlR. swrI from Serratia liquefaciens, which synthesizes BHL. yenI from Yersinia enterocolitica. ; GO: 0007165 signal transduction; PDB: 3P2H_A 3P2F_A 1KZF_A 1K4J_A 1RO5_A.
Probab=97.76 E-value=0.0002 Score=54.18 Aligned_cols=142 Identities=14% Similarity=0.157 Sum_probs=84.5
Q ss_pred eccccCHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhccccccccceeeEEEEECCccceeEEeecCcccccccCCc
Q 026519 28 EARIEDIWEVAETHCSCFFPNYTFPLDLMLRVDRLVAMLSGFTVQHGTRRTCLVAVVGSRMDETFFLGSEDFKVGGLDGK 107 (237)
Q Consensus 28 ~~~~~D~~~l~~l~~~~f~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~g~~~~ 107 (237)
.+..++++++.++-.+.|.+....... ......... -+.++..+++...+
T Consensus 4 ~~~~~~l~~~~rlR~~vFv~rlgW~v~----------~~dg~E~Dq-----------yD~~~~~ylv~~~~--------- 53 (182)
T PF00765_consen 4 ELSRRLLEEMFRLRHRVFVDRLGWDVP----------CEDGMEIDQ-----------YDDPDAVYLVALDD--------- 53 (182)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCSCCCHH----------CCTSEE--T-----------TGCTT-EEEEEEET---------
T ss_pred ccCHHHHHHHHHHHHHHHHHhhCCCCc----------CCCCcEeee-----------cCCCCCeEEEEEEC---------
Confidence 345677888999999999765433320 000000000 11233445555444
Q ss_pred ccccCCceEEEEEeccccCccCCCCCccc----cccCCCCCeeEEEEEEecccccc------cChHHHHHHHHHHHHHHc
Q 026519 108 FSLHRGYVAGILTVDTVADFLPRKGPLRQ----RSSFHRTGIAYISNVAVREKFRR------KGIAKRLIAKAEAQARGW 177 (237)
Q Consensus 108 ~~~~~~~ivG~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~i~~l~V~p~~rg------~Gig~~Ll~~~~~~~~~~ 177 (237)
|+++|++.+.+.....-....+.. .......+.+++..++|+++.++ .-+...|+..++++|.++
T Consensus 54 -----g~v~g~~RLlptt~p~ML~~~F~~ll~~~~~p~~~~vwE~SRf~v~~~~~~~~~~~~~~~~~~L~~~~~e~a~~~ 128 (182)
T PF00765_consen 54 -----GRVVGCARLLPTTGPYMLSDVFPHLLPDGPAPRSPDVWELSRFCVDPDRRRSRAGSRSPVTMELLLGMVEFALSN 128 (182)
T ss_dssp -----TEEEEEEEEEETTS--HHHHCTGGGHTTS---SSTTEEEEEEEEE-HCCCHHCHSCC-THHHHHHHHHHHHHHCT
T ss_pred -----CEEEEEeeeccCCCcchhhhHHHHHhCCCCCCCCCcceeeeEEEEcccccccccccccHHHHHHHHHHHHHHHHC
Confidence 889999988643221000000000 01112368899999999998542 246789999999999999
Q ss_pred CCcEEEEEeecCCcchHhHHhhCCCeEeec
Q 026519 178 GCRSIALHCDFNNLGATKLYKGQGFKCVKV 207 (237)
Q Consensus 178 g~~~i~l~~~~~N~~a~~fy~k~GF~~~~~ 207 (237)
|+..+...+.+ +..+++.+.||...-.
T Consensus 129 gi~~~v~V~~~---~~~r~l~r~G~~~~~l 155 (182)
T PF00765_consen 129 GIRHIVGVVDP---AMERILRRAGWPVRRL 155 (182)
T ss_dssp T-SEEEEEEEH---HHHHHHHHCT-EEEES
T ss_pred CCCEEEEEECh---HHHHHHHHcCCceEEC
Confidence 99998877764 7899999999998753
No 78
>TIGR03243 arg_catab_AOST arginine and ornithine succinyltransferase subunits. In many bacteria, the sole member of this protein family is arginine N-succinyltransferase (EC 2.3.1.109), the AstA protein of the arginine succinyltransferase (ast) pathway. However, in Pseudomonas aeruginosa and several other species, a tandem gene pair encodes alpha and beta subunits of a heterodimer that is designated arginine and ornithine succinyltransferase (AOST).
Probab=97.74 E-value=0.00039 Score=56.84 Aligned_cols=158 Identities=15% Similarity=0.134 Sum_probs=82.8
Q ss_pred eeeeccccCHHHHHHHhhccCCCCCCCCc-hhHHHHHHHHHHHhccccccccceeeEEEEECCccceeEEeecCcccccc
Q 026519 25 VVREARIEDIWEVAETHCSCFFPNYTFPL-DLMLRVDRLVAMLSGFTVQHGTRRTCLVAVVGSRMDETFFLGSEDFKVGG 103 (237)
Q Consensus 25 ~iR~~~~~D~~~l~~l~~~~f~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~g 103 (237)
.|||++..|+++|.+|...+=. .+..-. +.....+++..-...|... . .......++|.++.
T Consensus 1 vvRpv~~~Dl~aL~~LA~~sg~-G~TsLP~d~~~L~~rI~~S~~sF~~~-~----------~~~~~~YlFVLED~----- 63 (335)
T TIGR03243 1 IVRPVRTSDLDALMQLARESGI-GLTSLPADRAALGSRIARSEKSFAGE-S----------TRGEEGYLFVLEDT----- 63 (335)
T ss_pred CcccCccccHHHHHHHHHHcCC-CcccCCCCHHHHHHHHHHHHHHHhcc-c----------CCCCccEEEEEEeC-----
Confidence 4899999999999999887731 111111 2233333343333333211 0 11122233333321
Q ss_pred cCCcccccCCceEEEEEeccccCccCCCCCcccc-------------------ccCCCCCeeEEEEEEecccccccChHH
Q 026519 104 LDGKFSLHRGYVAGILTVDTVADFLPRKGPLRQR-------------------SSFHRTGIAYISNVAVREKFRRKGIAK 164 (237)
Q Consensus 104 ~~~~~~~~~~~ivG~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~i~~l~V~p~~rg~Gig~ 164 (237)
+.++|+|++.+........+....+.. ...+-...-+|+.++++|+||+.|.|+
T Consensus 64 -------~tg~vvGts~I~a~vG~~~PfY~yrv~~~vhaS~~L~v~~~~~~L~l~nd~tG~sElctLfL~p~~R~~~~G~ 136 (335)
T TIGR03243 64 -------ETGTVAGVSAIEAAVGLDEPFYNYRVGTLVHASRELGVYNKIPTLTLSNDLTGSSELCTLFLDPDYRKGGNGR 136 (335)
T ss_pred -------CCCeEEEEEeEEecccCCCCCEEEEcCceeecCcccCCccceeeEEeeccCCCCeeeEEEEECHHHcCCCchh
Confidence 247888888774332221111111111 223345778899999999999999999
Q ss_pred HHHHHHHHHHHHc--CC-cEEEEE--eecCCcchHhHHhhCCCeEee
Q 026519 165 RLIAKAEAQARGW--GC-RSIALH--CDFNNLGATKLYKGQGFKCVK 206 (237)
Q Consensus 165 ~Ll~~~~~~~~~~--g~-~~i~l~--~~~~N~~a~~fy~k~GF~~~~ 206 (237)
.|-+.-.=.+.+. -+ ..+... =..+...--+||+.+|-+..+
T Consensus 137 LLSr~RfLFiA~~~erF~~~viAEmrG~~De~G~SPFWd~lg~hFF~ 183 (335)
T TIGR03243 137 LLSRSRFLFIAAFRERFGDKIIAEMRGVSDEQGRSPFWEALGRHFFS 183 (335)
T ss_pred hHHHHHHHHHHhhHhhhhhhheeeccCccCCCCCCccHHHhhccccC
Confidence 8876544333221 11 111111 111223556788888877665
No 79
>TIGR03244 arg_catab_AstA arginine N-succinyltransferase. In many bacteria, the arginine succinyltransferase (ast) pathway operon consists of five genes, including this protein, arginine N-succinyltransferase (EC 2.3.1.109). In a few species, such as Pseudomonas aeruginosa, the member of this family is encoded adjacent to a paralog, and the two polypeptides form a heterodimeric enzyme, active on both arginine and ornithine. In such species, this polypeptide may be treated as the beta subunit of an enzyme that may be named either arginine N-succinyltransferase (AST) or arginine and orthithine N-succinyltransferase (AOST).
Probab=97.71 E-value=0.00046 Score=56.53 Aligned_cols=158 Identities=15% Similarity=0.122 Sum_probs=81.1
Q ss_pred eeeeccccCHHHHHHHhhccCCCCCCCCc-hhHHHHHHHHHHHhccccccccceeeEEEEECCccceeEEeecCcccccc
Q 026519 25 VVREARIEDIWEVAETHCSCFFPNYTFPL-DLMLRVDRLVAMLSGFTVQHGTRRTCLVAVVGSRMDETFFLGSEDFKVGG 103 (237)
Q Consensus 25 ~iR~~~~~D~~~l~~l~~~~f~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~g 103 (237)
.|||++..|+++|.+|...+=. .+..-. +.....+++..-...|.... .......++|.++.
T Consensus 1 vvRPv~~~Dl~aL~~LA~~sg~-G~TsLP~d~~~L~~rI~~S~~sF~~~~-----------~~~~~~YlFVLEDt----- 63 (336)
T TIGR03244 1 IVRPVETSDLDALYQLAQSTGI-GLTSLPANEDLLSARIERAEKTFSGEL-----------TRAEQGYLFVLEDT----- 63 (336)
T ss_pred CcccCccccHHHHHHHHHHcCC-CcccCCCCHHHHHHHHHHHHHHhcCcC-----------CCCCccEEEEEEeC-----
Confidence 4899999999999999887731 111111 22233333333333331110 11122333343321
Q ss_pred cCCcccccCCceEEEEEeccccCccCCCCCcccc-------------------ccCCCCCeeEEEEEEecccccccChHH
Q 026519 104 LDGKFSLHRGYVAGILTVDTVADFLPRKGPLRQR-------------------SSFHRTGIAYISNVAVREKFRRKGIAK 164 (237)
Q Consensus 104 ~~~~~~~~~~~ivG~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~i~~l~V~p~~rg~Gig~ 164 (237)
+.++++|++.+........+....+.. ...+-...-+|+.+.++|+||+.|.|+
T Consensus 64 -------~tg~vvGts~I~a~vG~~~PfY~yr~~~~vhaS~~L~v~~~~~~L~l~nd~tG~SElctLfL~p~~R~~~~G~ 136 (336)
T TIGR03244 64 -------ETGTVAGVSAIEAAVGLEEPFYNYRVGTVVHASKELGIYKALETLFLSNDLTGYSELCTLFLDPDYRKGGNGR 136 (336)
T ss_pred -------CCCeEEEEEeEEecccCCCCCEEEEcCceeecCcccCCceeeeeEEeeccCCCCeeeEEEEECHHHcCCcchh
Confidence 247888888774332211111111111 223345778899999999999999998
Q ss_pred HHHHHHHHHHHHc--CC-cEEEEE--eecCCcchHhHHhhCCCeEee
Q 026519 165 RLIAKAEAQARGW--GC-RSIALH--CDFNNLGATKLYKGQGFKCVK 206 (237)
Q Consensus 165 ~Ll~~~~~~~~~~--g~-~~i~l~--~~~~N~~a~~fy~k~GF~~~~ 206 (237)
.|-+.-.=.+.+. -+ ..+... =..+...--+||+.+|=+..+
T Consensus 137 LLSr~RfLFiA~~~erF~~~viAEmrG~~De~G~SPFWd~lg~hFF~ 183 (336)
T TIGR03244 137 LLSKSRFLFIAQFRERFSKKIIAEMRGVSDEQGRSPFWNALGRHFFS 183 (336)
T ss_pred hHHHHHHHHHHhhHhhhhhhhhhhhcCccCCCCCCchHHHhhccccC
Confidence 8776533333211 01 111111 011223556788887766655
No 80
>COG3053 CitC Citrate lyase synthetase [Energy production and conversion]
Probab=97.68 E-value=0.00094 Score=53.12 Aligned_cols=60 Identities=25% Similarity=0.315 Sum_probs=53.2
Q ss_pred EEEEEecccccccChHHHHHHHHHHHHHHcCCcEEEEEeecCCcchHhHHhhCCCeEeecCCC
Q 026519 148 ISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDFNNLGATKLYKGQGFKCVKVPEG 210 (237)
Q Consensus 148 i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~g~~~i~l~~~~~N~~a~~fy~k~GF~~~~~~~~ 210 (237)
|--++|++.+||-|++-+|+.+++..+-++|..++.+.+-+ ....++..+||..+...+.
T Consensus 59 ikcvAvs~s~qGeGl~lkl~TeLin~ay~~g~~hLFiyTKp---~~~~lFk~~GF~~i~~~~~ 118 (352)
T COG3053 59 IKCVAVSESLQGEGLALKLVTELINLAYERGRTHLFIYTKP---EYAALFKQCGFSEIASAEN 118 (352)
T ss_pred eEEEEechhcccccHHHHHHHHHHHHHHHcCCceEEEEech---hHHHHHHhCCceEeeccCc
Confidence 55689999999999999999999999999999999998877 4577999999999986554
No 81
>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.56 E-value=0.00021 Score=60.56 Aligned_cols=141 Identities=17% Similarity=0.170 Sum_probs=96.1
Q ss_pred CCCCCCCCceeeeccccCHHHHHHHhhccCCCCCCCCchh-HHHHHHHHHHHhccccccccceeeEEEEECCccceeEEe
Q 026519 16 XXXXXSPEIVVREARIEDIWEVAETHCSCFFPNYTFPLDL-MLRVDRLVAMLSGFTVQHGTRRTCLVAVVGSRMDETFFL 94 (237)
Q Consensus 16 ~~~~~~~~l~iR~~~~~D~~~l~~l~~~~f~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~v 94 (237)
.+..+...++++++.+.++++|.+|.+.+- ++.++. ....+...++.. ++....+.
T Consensus 406 YlK~Lem~l~vs~~de~~i~RIsQLtqkTN----QFnlTtkRy~e~dV~~~~~-------------------~~~~li~s 462 (574)
T COG3882 406 YLKNLEMRLTVSKFDEVNIPRISQLTQKTN----QFNLTTKRYNEEDVRQMQE-------------------DPNFLIFS 462 (574)
T ss_pred HHhhheEEEEEeeccccCcHHHHHHhhccc----ceeechhhhcHHHHHHHhh-------------------CCCeEEEE
Confidence 355667788999999999999999987661 222211 111122222221 11111111
Q ss_pred ecCcccccccCCcccccCCceEEEEEeccccCccCCCCCccccccCCCCCeeEEEEEEecccccccChHHHHHHHHHHHH
Q 026519 95 GSEDFKVGGLDGKFSLHRGYVAGILTVDTVADFLPRKGPLRQRSSFHRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQA 174 (237)
Q Consensus 95 ~~~~~~~~g~~~~~~~~~~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~ 174 (237)
..-.++.+ +.-+||++.+.. ....+.|+.+......=|+++-++||..+++.|
T Consensus 463 v~l~DKfg---------DnGiigvviv~k------------------k~~~w~IDt~lmSCRVlgRkvE~~l~~~~~e~A 515 (574)
T COG3882 463 VSLKDKFG---------DNGIIGVVIVEK------------------KESEWFIDTFLMSCRVLGRKVEQRLMNSLEEQA 515 (574)
T ss_pred EEeccccc---------cCceEEEEEEEe------------------cCCeEEhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11111222 466888888753 345588998899999999999999999999999
Q ss_pred HHcCCcEEEEEeec--CCcchHhHHhhCCCeEee
Q 026519 175 RGWGCRSIALHCDF--NNLGATKLYKGQGFKCVK 206 (237)
Q Consensus 175 ~~~g~~~i~l~~~~--~N~~a~~fy~k~GF~~~~ 206 (237)
...|+..+...=.+ .|.....||++.||+..+
T Consensus 516 ~~~gi~tir~~Y~pt~kN~pv~~FyE~mgf~l~~ 549 (574)
T COG3882 516 LSEGINTIRGYYIPTEKNAPVSDFYERMGFKLKG 549 (574)
T ss_pred HhcCcceeeeEecccccCCcHHHHHHHhcccccc
Confidence 99999988887555 477889999999999555
No 82
>PRK13834 putative autoinducer synthesis protein; Provisional
Probab=97.56 E-value=0.0028 Score=48.98 Aligned_cols=92 Identities=13% Similarity=0.075 Sum_probs=62.7
Q ss_pred CCceEEEEEeccccCccCCCCCcc--c--cccCCCCCeeEEEEEEeccccccc---C----hHHHHHHHHHHHHHHcCCc
Q 026519 112 RGYVAGILTVDTVADFLPRKGPLR--Q--RSSFHRTGIAYISNVAVREKFRRK---G----IAKRLIAKAEAQARGWGCR 180 (237)
Q Consensus 112 ~~~ivG~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~~~i~~l~V~p~~rg~---G----ig~~Ll~~~~~~~~~~g~~ 180 (237)
+|+++|++.+............+. . .......+.++++.++|+++++.. + +...|+..+.+++..+|++
T Consensus 62 ~g~vvG~~RLlptt~p~ml~~~fp~l~~~~~~~~~~~v~E~SRf~V~~~~~~~~~~~~~~~~~~~L~~~~~~~a~~~Gi~ 141 (207)
T PRK13834 62 SGRVAGCARLLPAIGPTMLAQVFPQLLPAGRLNAHPAMIESSRFCVDTALAEGRGGGQLHEATLTMFAGIIEWSMANGYT 141 (207)
T ss_pred CCeEEEEEecccCCCcchhhhhcHHhcCCCCCCCCCCEEEEeeeEEcccccccccccccCHHHHHHHHHHHHHHHHCCCC
Confidence 378999998864322110000000 0 011225689999999999985322 2 5678999999999999999
Q ss_pred EEEEEeecCCcchHhHHhhCCCeEee
Q 026519 181 SIALHCDFNNLGATKLYKGQGFKCVK 206 (237)
Q Consensus 181 ~i~l~~~~~N~~a~~fy~k~GF~~~~ 206 (237)
.++..+.+ ...+.+.+.||...-
T Consensus 142 ~~~~v~~~---~~~r~l~r~G~~~~~ 164 (207)
T PRK13834 142 EIVTATDL---RFERILARAGWPMQR 164 (207)
T ss_pred EEEEEECH---HHHHHHHHcCCCeEE
Confidence 98776665 678899999988754
No 83
>COG5628 Predicted acetyltransferase [General function prediction only]
Probab=97.27 E-value=0.0017 Score=44.51 Aligned_cols=74 Identities=18% Similarity=0.131 Sum_probs=54.5
Q ss_pred CCceEEEEEeccccCccCCCCCccccccCCCCCeeEEEEEEecccccccChHHHHHHHHHHHHHHcCCcEEEEEeecCCc
Q 026519 112 RGYVAGILTVDTVADFLPRKGPLRQRSSFHRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDFNNL 191 (237)
Q Consensus 112 ~~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~g~~~i~l~~~~~N~ 191 (237)
++.+||++.+....... ..-...+..+.+...|||+|+|++..+.+-+..+ |. -.+.+..+|.
T Consensus 45 ~~~~igf~l~L~~~~~~-------------~~iD~~~~efFIi~k~~~~GvGR~aaK~If~~~~--g~--w~Va~i~EN~ 107 (143)
T COG5628 45 GGLPVGFALVLDLAHSP-------------TPIDRAVAEFFIVRKHRRRGVGRAAAKAIFGSAW--GV--WQVATVRENT 107 (143)
T ss_pred CCceeeeeeeecccCCC-------------CcccccchheEeeehhhccchhHHHHHHHHHHhh--ce--EEEEEeccCC
Confidence 37899999875432211 1223557778899999999999999998877765 43 3456789999
Q ss_pred chHhHHhhCCC
Q 026519 192 GATKLYKGQGF 202 (237)
Q Consensus 192 ~a~~fy~k~GF 202 (237)
.|+.||++.-+
T Consensus 108 PA~~fwK~~~~ 118 (143)
T COG5628 108 PARAFWKRVAE 118 (143)
T ss_pred hhHHHHHhhhc
Confidence 99999998643
No 84
>PF13880 Acetyltransf_13: ESCO1/2 acetyl-transferase
Probab=97.23 E-value=0.00042 Score=43.28 Aligned_cols=31 Identities=39% Similarity=0.470 Sum_probs=27.6
Q ss_pred eeEEEEEEecccccccChHHHHHHHHHHHHH
Q 026519 145 IAYISNVAVREKFRRKGIAKRLIAKAEAQAR 175 (237)
Q Consensus 145 ~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~ 175 (237)
.+.|..|.|+|.+|++|||++||+.+....-
T Consensus 5 ~~GI~RIWV~~~~RR~GIAt~Lld~ar~~~i 35 (70)
T PF13880_consen 5 VCGISRIWVSPSHRRKGIATRLLDAARENFI 35 (70)
T ss_pred EEEeEEEEeChhhhhhhHHHHHHHHHHHhcc
Confidence 3779999999999999999999999887753
No 85
>PF13480 Acetyltransf_6: Acetyltransferase (GNAT) domain
Probab=97.17 E-value=0.0096 Score=42.52 Aligned_cols=56 Identities=16% Similarity=0.069 Sum_probs=46.2
Q ss_pred CceEEEEEeccccCccCCCCCccccccCCCCCeeEEEEEEecccccccChHHHHHHHHHHHHHHcCCcEEEEEe
Q 026519 113 GYVAGILTVDTVADFLPRKGPLRQRSSFHRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALHC 186 (237)
Q Consensus 113 ~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~g~~~i~l~~ 186 (237)
|++||+..... ..+..+....+++|+++..++|..|+..+++++.+.|++.+-+..
T Consensus 80 g~~va~~~~~~------------------~~~~~~~~~~g~~~~~~~~~~~~~l~~~~i~~a~~~g~~~~d~g~ 135 (142)
T PF13480_consen 80 GEPVAFALGFR------------------HGGTLYYWYGGYDPEYRKYSPGRLLLWEAIRWAIERGLRYFDFGG 135 (142)
T ss_pred CEEEEEEEEEE------------------ECCEEEEEEEEECHhhHhCCHHHHHHHHHHHHHHHCCCCEEEECC
Confidence 78888776543 244577788899999999999999999999999999998876644
No 86
>TIGR03694 exosort_acyl putative PEP-CTERM/exosortase system-associated acyltransferase. Members of this protein family are restricted to bacterial species with the PEP-CTERM/exosortase system predicted to act in exopolysaccharide-associated protein targeting. PSI-BLAST and CDD reveal relationships to the acyltransferase family that includes N-acyl-L-homoserine lactone synthetase. Several members of this family may be found in a single genome. These proteins likely contribute to chemical modifications in exopolysaccharide and biofilm structural material production.
Probab=97.11 E-value=0.012 Score=46.65 Aligned_cols=63 Identities=27% Similarity=0.291 Sum_probs=53.1
Q ss_pred CCCeeEEEEEEeccccccc--------C--------------------hHHHHHHHHHHHHHHcCCcEEEEEeecCCcch
Q 026519 142 RTGIAYISNVAVREKFRRK--------G--------------------IAKRLIAKAEAQARGWGCRSIALHCDFNNLGA 193 (237)
Q Consensus 142 ~~~~~~i~~l~V~p~~rg~--------G--------------------ig~~Ll~~~~~~~~~~g~~~i~l~~~~~N~~a 193 (237)
....++++.++|++++|++ | +...|+..+.+++.++|++.++..+.+ +.
T Consensus 108 ~~~i~E~SRf~V~~~~r~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~a~~~Gi~~~~~v~~~---~l 184 (241)
T TIGR03694 108 RSRIAEVSRLAVSKDFRRRKGEKLKPSGVGVIETEAPFSESERRRFPHIPLGLYLGLIALSSANGITHWYAIMEP---RL 184 (241)
T ss_pred CCceEEeehheECHhHhCCcccccccccccccccccccchhhcccCchHHHHHHHHHHHHHHHCCCcEEEEEeCH---HH
Confidence 4789999999999999974 2 557799999999999999998887765 67
Q ss_pred HhHHhhCCCeEeec
Q 026519 194 TKLYKGQGFKCVKV 207 (237)
Q Consensus 194 ~~fy~k~GF~~~~~ 207 (237)
.+.+.+.|+.....
T Consensus 185 ~r~l~r~G~~~~~l 198 (241)
T TIGR03694 185 ARLLSRFGIQFRQV 198 (241)
T ss_pred HHHHHHhCCceEEc
Confidence 88999999877543
No 87
>KOG2036 consensus Predicted P-loop ATPase fused to an acetyltransferase [General function prediction only]
Probab=97.02 E-value=0.019 Score=51.27 Aligned_cols=86 Identities=21% Similarity=0.254 Sum_probs=59.6
Q ss_pred CeeEEEEEEecccccccChHHHHHHHHHHHHHHcC--Cc-----------EE----------------------------
Q 026519 144 GIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWG--CR-----------SI---------------------------- 182 (237)
Q Consensus 144 ~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~g--~~-----------~i---------------------------- 182 (237)
..+.|-.|+|+|+|++.|+|++.++.+.++..-+. +. .+
T Consensus 613 ~GaRIVRIAvhP~y~~MGYGsrAvqLL~~y~eG~~~~i~e~~~~~~~~~k~v~e~~~vsllee~i~pR~~lppLL~~L~e 692 (1011)
T KOG2036|consen 613 SGARIVRIAVHPEYQKMGYGSRAVQLLTDYFEGKFTSISEDVLAVDHSIKRVEEAEKVSLLEEQIKPRKDLPPLLLKLSE 692 (1011)
T ss_pred cCceEEEEEeccchhccCccHHHHHHHHHHHhccCCCccccccccCccccccchhhhhhhhhhhcccccCCCceeeEccc
Confidence 44678889999999999999999999998875331 11 00
Q ss_pred -------EEEeecC-CcchHhHHhhCCCeEeecCCCCCCCCCCCCCCceeEeeeeccCCC
Q 026519 183 -------ALHCDFN-NLGATKLYKGQGFKCVKVPEGANWPQPKNSPDVKFKFMMKLLKAP 234 (237)
Q Consensus 183 -------~l~~~~~-N~~a~~fy~k~GF~~~~~~~~~~~~~~~~~~~~~~~~m~k~L~~~ 234 (237)
++.+... .+.-.+||.++||.++....... ..-+.+.++|.|.|..+
T Consensus 693 r~perldylGvSfGLT~~L~kFWk~~gF~PvylrQt~n-----~lTGEHtcimLk~L~~~ 747 (1011)
T KOG2036|consen 693 RPPERLDYLGVSFGLTPSLLKFWKKNGFVPVYLRQTSN-----DLTGEHTCIMLKTLEGD 747 (1011)
T ss_pred CCCcccceeeecccCCHHHHHHHHhcCceeEEeecccc-----ccccceeEEEEecCCCc
Confidence 1222221 12458999999999998654432 23356788999998743
No 88
>PF06852 DUF1248: Protein of unknown function (DUF1248); InterPro: IPR009658 This entry represents a conserved region within a number of proteins of unknown function that seem to be specific to Caenorhabditis elegans. Note that some proteins in the entry contain more than one copy of this region.
Probab=96.81 E-value=0.015 Score=43.64 Aligned_cols=81 Identities=14% Similarity=0.144 Sum_probs=52.0
Q ss_pred CceEEEEEeccccCccCCCCCccccccCCCCCeeEEEEEEecccccccChHHHHHHHHHHHHHHcCCcEEEEEeecCCcc
Q 026519 113 GYVAGILTVDTVADFLPRKGPLRQRSSFHRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDFNNLG 192 (237)
Q Consensus 113 ~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~g~~~i~l~~~~~N~~ 192 (237)
.++|+...+......... +.++..+++..+++|+|||+|+++.+-+.+.+..+..+ ..+.+ ..|..
T Consensus 56 ~~via~~~~~~~~~l~~~----------~d~pl~~~G~~w~~p~yRg~~~~kl~~~~~~~~~~~~~-~N~~~---~~~~~ 121 (181)
T PF06852_consen 56 DRVIATVHLIRFDPLNPS----------PDKPLQFIGFFWIDPEYRGKGIMKLQDDICMDELDSVD-DNSVA---QGNVK 121 (181)
T ss_pred CcEEEEEEEEEeccCCCC----------CCCCeEEEeeeeeCCcccCcchHHHHHHHHHHHhccCC-Cceee---ecCHH
Confidence 667777766432221111 13456899999999999999999755555556555432 23333 23457
Q ss_pred hHhHHhh-CCCeEeec
Q 026519 193 ATKLYKG-QGFKCVKV 207 (237)
Q Consensus 193 a~~fy~k-~GF~~~~~ 207 (237)
+.++|.+ .||...+.
T Consensus 122 ~~~~w~k~~G~~~~~h 137 (181)
T PF06852_consen 122 MSNFWHKMFGFDDYGH 137 (181)
T ss_pred HHHHHHHHhCCCCCcc
Confidence 8889988 59777764
No 89
>COG3138 AstA Arginine/ornithine N-succinyltransferase beta subunit [Amino acid transport and metabolism]
Probab=96.74 E-value=0.011 Score=46.92 Aligned_cols=22 Identities=23% Similarity=0.234 Sum_probs=19.7
Q ss_pred CceeeeccccCHHHHHHHhhcc
Q 026519 23 EIVVREARIEDIWEVAETHCSC 44 (237)
Q Consensus 23 ~l~iR~~~~~D~~~l~~l~~~~ 44 (237)
++.+||++..|++++++|...+
T Consensus 1 mlvvRP~~~aDl~al~~LA~~s 22 (336)
T COG3138 1 MLVVRPVERADLEALMELAVKT 22 (336)
T ss_pred CcccccccccCHHHHHHHHHhc
Confidence 4679999999999999998776
No 90
>COG1243 ELP3 Histone acetyltransferase [Transcription / Chromatin structure and dynamics]
Probab=96.71 E-value=0.0025 Score=53.99 Aligned_cols=50 Identities=22% Similarity=0.494 Sum_probs=43.4
Q ss_pred cccccccChHHHHHHHHHHHHHHcCCcEEEEEeecCCcchHhHHhhCCCeEee
Q 026519 154 REKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDFNNLGATKLYKGQGFKCVK 206 (237)
Q Consensus 154 ~p~~rg~Gig~~Ll~~~~~~~~~~g~~~i~l~~~~~N~~a~~fy~k~GF~~~~ 206 (237)
...+|++|+|++||+.++..|++.+...|.+... ..+...|.|+||+..|
T Consensus 459 ~~~~QH~G~G~~L~~~AE~ia~ee~~~ki~viSg---iG~ReYy~k~GY~~~g 508 (515)
T COG1243 459 EDEWQHRGYGRELLEEAERIAREEGAKKILVISG---IGVREYYRKLGYELDG 508 (515)
T ss_pred cchhhcccHHHHHHHHHHHHHHhhccccEEEEec---ccHHHHHHHhCccccC
Confidence 5779999999999999999999988887766544 3789999999999887
No 91
>COG3916 LasI N-acyl-L-homoserine lactone synthetase [Signal transduction mechanisms / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=96.01 E-value=0.15 Score=38.97 Aligned_cols=93 Identities=17% Similarity=0.165 Sum_probs=62.5
Q ss_pred CCceEEEEEeccccCccCCCCCcccc----ccCCCCCeeEEEEEEecc--ccccc---C-hHHHHHHHHHHHHHHcCCcE
Q 026519 112 RGYVAGILTVDTVADFLPRKGPLRQR----SSFHRTGIAYISNVAVRE--KFRRK---G-IAKRLIAKAEAQARGWGCRS 181 (237)
Q Consensus 112 ~~~ivG~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~i~~l~V~p--~~rg~---G-ig~~Ll~~~~~~~~~~g~~~ 181 (237)
+++|+|++.+.+.....-....+... ........++.+.++|++ .-++. . ++..|+.-+++++..+|++.
T Consensus 61 ~g~I~G~~RlLptt~P~mL~~vF~~Ll~~~~~P~~p~vwEsSRF~vd~~~a~~~~g~~~~a~~el~~g~ie~a~~~G~~~ 140 (209)
T COG3916 61 DGRIVGCVRLLPTTGPYMLTDVFPALLEGGPPPSSPGVWESSRFAVDKPSARRAAGGVSPAAYELFAGMIEYALARGITG 140 (209)
T ss_pred CCcEEEEEEeccCCCcchhhhhhHHHhcCCCCCCCCCeEEEeeeeeccccchhhcCCccHHHHHHHHHHHHHHHHcCCce
Confidence 38999999885432111000000000 001134789999999986 33333 3 47789999999999999999
Q ss_pred EEEEeecCCcchHhHHhhCCCeEeec
Q 026519 182 IALHCDFNNLGATKLYKGQGFKCVKV 207 (237)
Q Consensus 182 i~l~~~~~N~~a~~fy~k~GF~~~~~ 207 (237)
|..-+.. +..+...+.||.....
T Consensus 141 IvtVt~~---~meril~r~Gw~~~ri 163 (209)
T COG3916 141 IVTVTDT---GMERILRRAGWPLTRI 163 (209)
T ss_pred EEEEEch---HHHHHHHHcCCCeEEc
Confidence 8877765 7899999999987764
No 92
>COG3375 Uncharacterized conserved protein [Function unknown]
Probab=95.98 E-value=0.23 Score=38.34 Aligned_cols=68 Identities=21% Similarity=0.165 Sum_probs=52.9
Q ss_pred eeEEEEEEecccccccChHHHHHHHHHHHHHHcCCcEEEEEeecCCcchHhH-HhhCCCeEeecCCCCC
Q 026519 145 IAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDFNNLGATKL-YKGQGFKCVKVPEGAN 212 (237)
Q Consensus 145 ~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~g~~~i~l~~~~~N~~a~~f-y~k~GF~~~~~~~~~~ 212 (237)
..|=+.++|.|+++|.|+|-.|=..--+.+.+.|+..+.-+.+|-|.-.-+| ..|+|=...-.+++++
T Consensus 74 y~ySH~~gV~e~~k~sglg~aLK~~Qre~a~~~G~tli~WTfDPl~alNA~fNi~KLGa~artYi~nfY 142 (266)
T COG3375 74 YLYSHMLGVREEVKGSGLGVALKMKQRERALSMGYTLIAWTFDPLNALNARFNISKLGAIARTYIKNFY 142 (266)
T ss_pred eeeeeehhccccccccchhhhhHHHHHHHHHhcCeeeEEEecccchhhhhhcchhhhceeEEEeecccc
Confidence 3566668999999999999999888889999999999888888877655555 5667765555555543
No 93
>TIGR03827 GNAT_ablB putative beta-lysine N-acetyltransferase. Members of this protein family are GNAT family acetyltransferases, based on a seed alignment in which every member is associated with a lysine 2,3-aminomutase family protein, usually as the adjacent gene. This family includes AblB, the enzyme beta-lysine acetyltransferase that completes the two-step synthesis of the osmolyte (compatible solute) N-epsilon-acetyl-beta-lysine; all members of the family may have this function. Note that N-epsilon-acetyl-beta-lysine has been observed only in methanogenic archaea (e.g. Methanosarcina) but that this model, paired with TIGR03820, suggests a much broader distribution.
Probab=95.44 E-value=0.068 Score=43.02 Aligned_cols=63 Identities=21% Similarity=0.177 Sum_probs=52.3
Q ss_pred ChHHHHHHHHHHHHHHcCCcEEEEEeecCCcchHhHHhhCCCeEeecCCCCCCCCCCCCCCceeEeeeeccCC
Q 026519 161 GIAKRLIAKAEAQARGWGCRSIALHCDFNNLGATKLYKGQGFKCVKVPEGANWPQPKNSPDVKFKFMMKLLKA 233 (237)
Q Consensus 161 Gig~~Ll~~~~~~~~~~g~~~i~l~~~~~N~~a~~fy~k~GF~~~~~~~~~~~~~~~~~~~~~~~~m~k~L~~ 233 (237)
|-...|++.+.+.|+++|+..|.+.+-. ....+|++.||..++.++.++ .+.+.++|.+.|++
T Consensus 21 ~~~~~~~~~~~~~a~~~~~~ki~~~~~~---~~~~~~~~~g~~~e~~i~~~f-------~g~~~~~~~~~~~~ 83 (266)
T TIGR03827 21 NDVEALIPDLDALAKKEGYTKIIAKVPG---SDKPLFEERGYLEEAKIPGYF-------NGHDAYFMSKYLDE 83 (266)
T ss_pred ccHHHHHHHHHHHHHHcCCcEEEEEccH---HHHHHHHHCCCeEEEeccccc-------CCCceEEEEEcCch
Confidence 4588999999999999999999998866 358899999999999988653 23457889888864
No 94
>KOG2535 consensus RNA polymerase II elongator complex, subunit ELP3/histone acetyltransferase [Chromatin structure and dynamics; Transcription]
Probab=95.31 E-value=0.03 Score=45.85 Aligned_cols=48 Identities=29% Similarity=0.510 Sum_probs=39.6
Q ss_pred cccccChHHHHHHHHHHHHHH-cCCcEEEEEeecCCcchHhHHhhCCCeEee
Q 026519 156 KFRRKGIAKRLIAKAEAQARG-WGCRSIALHCDFNNLGATKLYKGQGFKCVK 206 (237)
Q Consensus 156 ~~rg~Gig~~Ll~~~~~~~~~-~g~~~i~l~~~~~N~~a~~fy~k~GF~~~~ 206 (237)
.||++|+|+.||+.++..|++ +|-..|.+... ....++|.|+||+..|
T Consensus 498 KfQHQG~GtLLmeEAERIAr~EHgS~KiavISG---VGtR~YY~klGY~LdG 546 (554)
T KOG2535|consen 498 KFQHQGFGTLLMEEAERIAREEHGSGKIAVISG---VGTRNYYRKLGYELDG 546 (554)
T ss_pred hhhhcchhhHHHHHHHHHHHHhcCCCceEEEec---cchHHHHHhhCeeecC
Confidence 599999999999999999986 47766655433 3678899999999877
No 95
>PF01233 NMT: Myristoyl-CoA:protein N-myristoyltransferase, N-terminal domain; InterPro: IPR022676 Myristoyl-CoA:protein N-myristoyltransferase (2.3.1.97 from EC) (Nmt) [] is the enzyme responsible for transferring a myristate group on the N-terminal glycine of a number of cellular eukaryotics and viral proteins. Nmt is a monomeric protein of about 50 to 60kDa whose sequence appears to be well conserved. The N and C-terminal domains of NMT are structurally similar, each adopting an acyl-CoA N-acyltransferase-like fold. This entry represents the N-terminal region. ; GO: 0004379 glycylpeptide N-tetradecanoyltransferase activity; PDB: 2P6G_B 2P6F_F 2P6E_A 1IIC_A 1IID_A 2NMT_A 4A33_A 3H5Z_A 4A2Z_A 2WSA_A ....
Probab=95.29 E-value=0.57 Score=34.34 Aligned_cols=60 Identities=17% Similarity=0.134 Sum_probs=42.4
Q ss_pred CCceEEEEEeccccCccCCCCCccccccCCCCCeeEEEEEEecccccccChHHHHHHHHHHHHHHcCCcE
Q 026519 112 RGYVAGILTVDTVADFLPRKGPLRQRSSFHRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRS 181 (237)
Q Consensus 112 ~~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~g~~~ 181 (237)
.+++||++......-... -..-...+|.-++|+...|.++++--|++++...+...|+-.
T Consensus 87 ~~kLvgfIsaip~~irv~----------~~~~~~~eINFLCVhKklRskrlAPvLIkEItRRvn~~gI~q 146 (162)
T PF01233_consen 87 SKKLVGFISAIPATIRVR----------DKVIKMVEINFLCVHKKLRSKRLAPVLIKEITRRVNLQGIWQ 146 (162)
T ss_dssp TTEEEEEEEEEEEEEEET----------TEEEEEEEEEEEEE-GGGTTSSHHHHHHHHHHHHHHTTT--E
T ss_pred CCEEEEEEccceEEEEEe----------eeEeeeeeEEEEeecHhHhhcCCcHHHHHHHHHHhhhcCcee
Confidence 378888887643211111 012345899999999999999999999999999998887644
No 96
>PF05301 Mec-17: Touch receptor neuron protein Mec-17; InterPro: IPR007965 Mec-17 is the protein product of one of the 18 genes required for the development and function of the touch receptor neuron for gentle touch. Mec-17 is specifically required for maintaining the differentiation of the touch receptor []. This family is conserved to higher eukaryotes.; GO: 0019799 tubulin N-acetyltransferase activity
Probab=95.19 E-value=0.2 Score=34.69 Aligned_cols=86 Identities=20% Similarity=0.201 Sum_probs=50.8
Q ss_pred CceEEEEEeccccCccCCCCCccccccCCCCCeeEEEEEEecccccccChHHHHHHHHHHHHHHcCCcEEEEEeecCCcc
Q 026519 113 GYVAGILTVDTVADFLPRKGPLRQRSSFHRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDFNNLG 192 (237)
Q Consensus 113 ~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~g~~~i~l~~~~~N~~ 192 (237)
+.++|++-+..-.-+........ ..-.+..-|..++|+++.|++|+|++|++++++.=. ..-..+..+-..+.
T Consensus 18 g~viG~LKVG~K~Lfl~d~~g~~----~e~~~~~cvLDFyVhes~QR~G~Gk~LF~~ML~~e~---~~p~~~a~DrPS~K 90 (120)
T PF05301_consen 18 GAVIGFLKVGYKKLFLLDERGQH----REIEPLLCVLDFYVHESRQRRGYGKRLFDHMLQEEN---VSPHQLAIDRPSPK 90 (120)
T ss_pred ceEEEEEEEeeeeEEEEcCCCCE----EEecccceeeeEEEEeceeccCchHHHHHHHHHHcC---CCcccceecCCcHH
Confidence 77888887754322221110000 001222245669999999999999999999987632 33333444444456
Q ss_pred hHhHHhhCCCeEee
Q 026519 193 ATKLYKGQGFKCVK 206 (237)
Q Consensus 193 a~~fy~k~GF~~~~ 206 (237)
-..|.+|. |....
T Consensus 91 ll~Fl~Kh-y~L~~ 103 (120)
T PF05301_consen 91 LLSFLKKH-YGLQR 103 (120)
T ss_pred HHHHHHHh-cCCCc
Confidence 68888876 44443
No 97
>TIGR03019 pepcterm_femAB FemAB-related protein, PEP-CTERM system-associated. Members of this protein family are found always as part of extended exopolysaccharide biosynthesis loci in bacteria. In nearly every case, these loci contain determinants for the processing of the PEP-CTERM proposed C-terminal protein sorting signal. This family shows remote, local sequence similarity to the FemAB protein family (see pfam02388), whose members
Probab=94.75 E-value=0.65 Score=38.60 Aligned_cols=58 Identities=16% Similarity=0.078 Sum_probs=49.2
Q ss_pred EEEecccccccChHHHHHHHHHHHHHHcCCcEEEEEeecCCcchHhHHhhCCCeEeec
Q 026519 150 NVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDFNNLGATKLYKGQGFKCVKV 207 (237)
Q Consensus 150 ~l~V~p~~rg~Gig~~Ll~~~~~~~~~~g~~~i~l~~~~~N~~a~~fy~k~GF~~~~~ 207 (237)
..+.++++++.+-+..|+-+++++|.++|++...+.....+....+|=++.||+.+..
T Consensus 224 ~~g~~~~~~~~~~~~lL~w~~i~~a~~~G~~~fDfG~s~~~~G~~~FK~~~G~~~~~l 281 (330)
T TIGR03019 224 YAGGLREARDVAANDLMYWELMRRACERGLRVFDFGRSKRGTGPFKFKKNWGFEPQPL 281 (330)
T ss_pred eccChHHHHhhChHHHHHHHHHHHHHHCCCcEEEcCCCCCCCccHHHHhcCCCeeccc
Confidence 4567889999999999999999999999999988887666667778888889998753
No 98
>PRK14852 hypothetical protein; Provisional
Probab=94.42 E-value=0.59 Score=44.21 Aligned_cols=68 Identities=12% Similarity=0.011 Sum_probs=57.5
Q ss_pred CCCeeEEEEEEecccccccChHHHHHHHHHHHHHHcCCcEEEEEeecCCcchHhHHhh-CCCeEeecCCCCC
Q 026519 142 RTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDFNNLGATKLYKG-QGFKCVKVPEGAN 212 (237)
Q Consensus 142 ~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~g~~~i~l~~~~~N~~a~~fy~k-~GF~~~~~~~~~~ 212 (237)
....+++..++++++.|..-+--.+++.+.+++...++..+.+.|+|. =..||++ +||+..++.+.+.
T Consensus 118 Gr~v~EvtrLa~d~~~~~~~l~~~l~~~~~~y~~~~~~dd~~i~VnPk---H~~FY~r~l~f~~ig~~r~~p 186 (989)
T PRK14852 118 GRNVVEVGALATQYSRRWTNLMVFLAKAMFQYSMMSEVDDILVTVNPK---HVKFYTDIFLFKPFGEVRHYD 186 (989)
T ss_pred CCeEEeeehheechhhcccchhHHHHHHHHHHHHHcCCCeEEEEECcc---hHHHHHHHhCCccccccccCC
Confidence 457899999999998888877778899998998888999999988875 4679997 6999999876654
No 99
>PF01853 MOZ_SAS: MOZ/SAS family; InterPro: IPR002717 Moz is a monocytic leukemia Zn_finger protein and the SAS protein from Saccharomyces cerevisiae (Baker's yeast) is involved in silencing the Hmr locus. These proteins were reported to be homologous to acetyltransferases [] but this similarity is not supported by standard sequence analysis.; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus; PDB: 3TO6_A 1MJA_A 1MJ9_A 3TO7_A 3TO9_A 1MJB_A 1FY7_A 2OZU_A 2RC4_A 2OU2_A ....
Probab=93.71 E-value=0.26 Score=37.13 Aligned_cols=34 Identities=24% Similarity=0.257 Sum_probs=28.6
Q ss_pred eEEEEEEecccccccChHHHHHHHHHHHHHHcCC
Q 026519 146 AYISNVAVREKFRRKGIAKRLIAKAEAQARGWGC 179 (237)
Q Consensus 146 ~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~g~ 179 (237)
.-+.-|.|.|.||++|+|+.|++...+.++..|.
T Consensus 81 ~NLsCIl~lP~yQrkGyG~~LI~fSY~LSr~e~~ 114 (188)
T PF01853_consen 81 NNLSCILTLPPYQRKGYGRFLIDFSYELSRREGK 114 (188)
T ss_dssp EEESEEEE-GGGTTSSHHHHHHHHHHHHHHHTTS
T ss_pred eeEeehhhcchhhhcchhhhhhhhHHHHhhccCc
Confidence 4566699999999999999999999999987653
No 100
>COG2401 ABC-type ATPase fused to a predicted acetyltransferase domain [General function prediction only]
Probab=93.57 E-value=0.036 Score=46.98 Aligned_cols=65 Identities=17% Similarity=0.162 Sum_probs=47.7
Q ss_pred CCCeeEEEEEEecccccccChHHHHHHHHHHHHHHcCCcEEEEE-----eecCCcchHhHHhhCCCeEee
Q 026519 142 RTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALH-----CDFNNLGATKLYKGQGFKCVK 206 (237)
Q Consensus 142 ~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~g~~~i~l~-----~~~~N~~a~~fy~k~GF~~~~ 206 (237)
++....|..+.|+|+||+-|||..-+..+.++..+.-+....-. +...-..=.+|+++.||+..=
T Consensus 238 ntaaariarvvvhpdyr~dglg~~sv~~a~ewI~eRriPEmr~rkHlvetiaqmarynpffe~~gfkylw 307 (593)
T COG2401 238 NTAAARIARVVVHPDYRADGLGQLSVIAALEWIIERRIPEMRPRKHLVETIAQMARYNPFFEKVGFKYLW 307 (593)
T ss_pred hhhhhheeEEEeccccccCccchhHHHHHHHHHHHhhChhhhhhhhHHHHHHHHHhcCchhhhhceeeee
Confidence 45678899999999999999999999999999998765543221 111111124699999998763
No 101
>KOG3698 consensus Hyaluronoglucosaminidase [Posttranslational modification, protein turnover, chaperones]
Probab=93.56 E-value=0.99 Score=39.82 Aligned_cols=60 Identities=15% Similarity=0.164 Sum_probs=52.2
Q ss_pred EEecccccccChHHHHHHHHHHHHHHcCCcEEEEEeecCCcchHhHHhhCCCeEeecCCC
Q 026519 151 VAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDFNNLGATKLYKGQGFKCVKVPEG 210 (237)
Q Consensus 151 l~V~p~~rg~Gig~~Ll~~~~~~~~~~g~~~i~l~~~~~N~~a~~fy~k~GF~~~~~~~~ 210 (237)
.++..+.---|+.++|+.-++..++.+|.....+.|..++.+-++||.++||..++..+.
T Consensus 822 ~~~~~~a~D~~~~k~m~~vll~tL~aNGsrGaf~~V~~dD~~~~~fys~lG~~d~~~~e~ 881 (891)
T KOG3698|consen 822 TYFGMDASDAHPMKKMIQVLLVTLAANGSRGAFLTVAIDDIERQKFYSELGLTDLGLSEC 881 (891)
T ss_pred hccccccccchHHHHHHHHHHHHHHhcCCcceeEEechhHHHHHHHHHHhchHHHhHhhc
Confidence 345555667799999999999999999999999999999999999999999998886543
No 102
>PRK01305 arginyl-tRNA-protein transferase; Provisional
Probab=93.37 E-value=0.45 Score=37.60 Aligned_cols=78 Identities=13% Similarity=0.087 Sum_probs=53.7
Q ss_pred CCceEEEEEeccccCccCCCCCccccccCCCCCeeEEEEEEecccccccChHHHHHHHHHHHHHHcCCcEEEEEeecCCc
Q 026519 112 RGYVAGILTVDTVADFLPRKGPLRQRSSFHRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDFNNL 191 (237)
Q Consensus 112 ~~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~g~~~i~l~~~~~N~ 191 (237)
+|++||+..+....+-. -.|- ..-+|++..+++|+..+-.-++.|++.|.+.++|.-.-.+.
T Consensus 152 ~g~LiaVav~D~l~d~l-----------------SAVY-~FyDPd~~~~SLG~~~iL~qI~~ak~~gl~y~YLGY~I~~c 213 (240)
T PRK01305 152 DGKLVAVAVTDVLDDGL-----------------SAVY-TFYDPDEEHRSLGTFAILWQIELAKRLGLPYVYLGYWIKGS 213 (240)
T ss_pred CCeEEEEEEEeccCCce-----------------eeEE-EeeCCCccccCCHHHHHHHHHHHHHHcCCCeEeeeEEECCC
Confidence 58999998886542211 1121 35699999999999999999999999999999998544332
Q ss_pred chHhHHhhCCCeEeecCC
Q 026519 192 GATKLYKGQGFKCVKVPE 209 (237)
Q Consensus 192 ~a~~fy~k~GF~~~~~~~ 209 (237)
.++==|..|.......
T Consensus 214 --~kM~YK~~f~P~E~l~ 229 (240)
T PRK01305 214 --RKMNYKARFRPLEILI 229 (240)
T ss_pred --CcccccccCCcceeec
Confidence 2232344455555443
No 103
>PF04377 ATE_C: Arginine-tRNA-protein transferase, C terminus; InterPro: IPR007472 Arginine-tRNA-protein transferase catalyses the post-translational conjugation of arginine to the N terminus of a protein. In eukaryotes, this functions as part of the N terminus rule pathway of protein degradation by conjugating a destabilising amino acid to the N-terminal aspartate or glutamate of a protein, targeting the protein for ubiquitin-dependent proteolysis. N-terminal cysteine is sometimes modified []. In Saccharomyces cerevisiae, Cys20, 23, 94 and/or 95 are thought to be important for activity []. Of these, only Cys 94 appears to be completely conserved in this family. This entry represents the C-terminal region of the enzyme arginine-tRNA-protein transferase, found in both eukaryotic and prokaryotic enzymes.; GO: 0004057 arginyltransferase activity, 0016598 protein arginylation
Probab=92.92 E-value=0.68 Score=32.84 Aligned_cols=59 Identities=17% Similarity=0.175 Sum_probs=45.6
Q ss_pred CCceEEEEEeccccCccCCCCCccccccCCCCCeeEEEEEEecccccccChHHHHHHHHHHHHHHcCCcEEEEEeec
Q 026519 112 RGYVAGILTVDTVADFLPRKGPLRQRSSFHRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDF 188 (237)
Q Consensus 112 ~~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~g~~~i~l~~~~ 188 (237)
++++||+..+....+-.. .|- ..-+|++...++|+-.+-.-++.|++.|++.++|.=.-
T Consensus 47 ~~kLiav~v~D~l~~glS-----------------aVY-~fyDPd~~~~SlG~~~iL~eI~~a~~~~l~y~YLGY~I 105 (128)
T PF04377_consen 47 DGKLIAVAVVDILPDGLS-----------------AVY-TFYDPDYSKRSLGTYSILREIELARELGLPYYYLGYWI 105 (128)
T ss_pred CCeEEEEEEeecccchhh-----------------hee-eeeCCCccccCcHHHHHHHHHHHHHHcCCCEEeeCeEe
Confidence 489999988865432211 122 34599999999999999999999999999999997443
No 104
>cd04264 DUF619-NAGS DUF619 domain of various N-acetylglutamate Synthases of the fungal arginine-biosynthetic pathway and urea cycle found in humans and fish. DUF619-NAGS: This family includes the DUF619 domain of various N-acetylglutamate synthases (NAGS) of the urea cycle found in humans and fish, the DUF619 domain of the NAGS of the fungal arginine-biosynthetic pathway (FABP), as well as the DUF619 domain present in C-terminal of a NAG kinase-like domain in a limited number of predicted NAGSs found in bacteria and Dictyostelium. Ureogenic NAGS is a mitochondrial enzyme catalyzing the formation of NAG from acetylcoenzyme A and L-glutamate. NAGS is an essential allosteric activator of carbamylphosphate synthase I, the first and rate limiting enzyme of the urea cycle. Domain architecture of ureogenic and fungal NAGS consists of an N-terminal NAG kinase-like domain and a C-terminal DUF619 domain. The DUF619 domain function has yet to be characterized.
Probab=92.90 E-value=0.35 Score=32.63 Aligned_cols=44 Identities=16% Similarity=0.225 Sum_probs=35.0
Q ss_pred CeeEEEEEEecccccccChHHHHHHHHHHHHHHcCCcEEEEEeecCCcc
Q 026519 144 GIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDFNNLG 192 (237)
Q Consensus 144 ~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~g~~~i~l~~~~~N~~ 192 (237)
...+|+.++|.+..||.|+|..+++.+.+.. +.+.-.+..+|+.
T Consensus 33 ~~~yLdKfaV~~~~~g~gvad~vf~~i~~d~-----~~L~Wrsr~~n~~ 76 (99)
T cd04264 33 GVPYLDKFAVSSSAQGEGTSDALWRRLRRDF-----PKLFWRSRKTNPI 76 (99)
T ss_pred CceEEEEEEEchhhhhcChHHHHHHHHHhhC-----CceEEEeCCCCcc
Confidence 5589999999999999999999999887663 3455556666653
No 105
>PF11124 Pho86: Inorganic phosphate transporter Pho86; InterPro: IPR024297 Pho86p is an ER protein which is produced in response to phosphate starvation. It is essential for growth when phosphate levels are limiting []. Pho86p is also involved in the regulation of Pho84p, a high-affinity phosphate transporter, which is localised to the endoplasmic reticulum (ER) in low phosphate medium. When the level of phosphate increases Pho84p is transported to the vacuole. Pho86p is required for packaging of Pho84p in to COPII vesicles [].
Probab=91.81 E-value=1.3 Score=35.95 Aligned_cols=91 Identities=20% Similarity=0.262 Sum_probs=67.4
Q ss_pred cccccccCCcccccCCceEEEEEeccccCccCCCCCccccccCCCCCeeEEEEEEecccccccChHHHHHHHHHHHHHHc
Q 026519 98 DFKVGGLDGKFSLHRGYVAGILTVDTVADFLPRKGPLRQRSSFHRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGW 177 (237)
Q Consensus 98 ~~~~~g~~~~~~~~~~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~ 177 (237)
+..++-|+ +.+|+.+.+....+.... ..-.+.|..+.|+.=|..-|+=..|++|++-..++.
T Consensus 170 NT~IIvYR-------etPIAiisl~~~~~~St~-----------~~~vv~ItgigvRkVy~Ksgi~e~LidWA~~Rtr~l 231 (304)
T PF11124_consen 170 NTHIIVYR-------ETPIAIISLVPNKDQSTK-----------ENFVVKITGIGVRKVYVKSGIDEDLIDWAMLRTRQL 231 (304)
T ss_pred cceEEEEc-------CCceEEEEeccccccCCC-----------ceEEEEEeeeEEEEEEeecChHHHHHHHHHHHHHHH
Confidence 34556665 788999988765432221 233478899999999999999999999997666652
Q ss_pred ---------CC-cEEEEEeecCCcchHhHHhhCCCeEee
Q 026519 178 ---------GC-RSIALHCDFNNLGATKLYKGQGFKCVK 206 (237)
Q Consensus 178 ---------g~-~~i~l~~~~~N~~a~~fy~k~GF~~~~ 206 (237)
|. =.+.+.+.+.......+.++.||+.+.
T Consensus 232 ~~ey~k~k~~~si~ll~d~YSFD~~~~k~L~~~gF~~i~ 270 (304)
T PF11124_consen 232 YKEYLKGKKGCSIKLLVDVYSFDKDMKKTLKKKGFKKIS 270 (304)
T ss_pred HHHhccccccceEEEEEEeeeccHHHHHHHHHCCCeeee
Confidence 11 134556777888899999999999998
No 106
>PHA00432 internal virion protein A
Probab=91.62 E-value=1.6 Score=31.15 Aligned_cols=30 Identities=13% Similarity=-0.054 Sum_probs=26.8
Q ss_pred CCcEEEEEeecCCcchHhHHhhCCCeEeec
Q 026519 178 GCRSIALHCDFNNLGATKLYKGQGFKCVKV 207 (237)
Q Consensus 178 g~~~i~l~~~~~N~~a~~fy~k~GF~~~~~ 207 (237)
.++.+.-.|...|..+++|.+.+||+....
T Consensus 92 ~yp~LwNyV~~~N~~hir~Lk~lGf~f~~e 121 (137)
T PHA00432 92 QYPSLWNYVWVGNKSHIRFLKSIGAVFHNE 121 (137)
T ss_pred hhhhhheeeecCCHHHHHHHHHcCeeeecc
Confidence 467788889999999999999999999875
No 107
>PLN03238 probable histone acetyltransferase MYST; Provisional
Probab=91.53 E-value=0.76 Score=37.02 Aligned_cols=32 Identities=25% Similarity=0.306 Sum_probs=28.3
Q ss_pred EEEEEEecccccccChHHHHHHHHHHHHHHcC
Q 026519 147 YISNVAVREKFRRKGIAKRLIAKAEAQARGWG 178 (237)
Q Consensus 147 ~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~g 178 (237)
-+.-|.|.|.||++|+|+.|++...+..+..|
T Consensus 157 NLaCIltLPpyQrkGyG~~LI~fSYeLSr~Eg 188 (290)
T PLN03238 157 NLACILTLPPYQRKGYGKFLISFAYELSKREG 188 (290)
T ss_pred cEEEEEecChhhhccHhHhHHHHHhHHhhccC
Confidence 36668999999999999999999999988665
No 108
>KOG2779 consensus N-myristoyl transferase [Lipid transport and metabolism]
Probab=91.21 E-value=3.2 Score=34.47 Aligned_cols=77 Identities=12% Similarity=0.033 Sum_probs=51.6
Q ss_pred CceEEEEEeccccCccCCCCCccccccCCCCCeeEEEEEEecccccccChHHHHHHHHHHHHHHcCCcE-EE--EEeecC
Q 026519 113 GYVAGILTVDTVADFLPRKGPLRQRSSFHRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRS-IA--LHCDFN 189 (237)
Q Consensus 113 ~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~g~~~-i~--l~~~~~ 189 (237)
.++|||+...+..-.. .-.....++|.-+||+...|+++++=-|++++...+.-.|+-. ++ -.+.+.
T Consensus 145 ~kLVaFIsaiP~~irv----------rdk~vk~veINFLCVHKkLRSKRlaPvLIrEITRRvnl~gIfqA~yTaGvvLp~ 214 (421)
T KOG2779|consen 145 KKLVAFISAIPATIRV----------RDKVVKMVEINFLCVHKKLRSKRLAPVLIREITRRVNLEGIFQAAYTAGVVLPK 214 (421)
T ss_pred CceEEEEeccccEEEE----------ccceeeeeeEEEEEEehhhhccccccHHHHHHHHHhhhhhhhhHhhhcceeecc
Confidence 6888888764321111 0112356899999999999999999999999998886555421 11 124556
Q ss_pred CcchHhHHhh
Q 026519 190 NLGATKLYKG 199 (237)
Q Consensus 190 N~~a~~fy~k 199 (237)
+.+..+.|.|
T Consensus 215 PVstcRY~HR 224 (421)
T KOG2779|consen 215 PVSTCRYWHR 224 (421)
T ss_pred ccchhhhhhc
Confidence 6666666655
No 109
>cd04265 DUF619-NAGS-U DUF619 domain of various N-acetylglutamate Synthases (NAGS) of the urea (U) cycle of humans and fish. This family includes the DUF619 domain of various N-acetylglutamate synthases (NAGS) of the urea cycle found in humans and fish, the DUF619 domain of the NAGS of the fungal arginine-biosynthetic pathway (FABP), as well as the DUF619 domain present in C-terminal of a NAG kinase-like domain in a limited number of predicted NAGSs found in bacteria and Dictyostelium. Ureogenic NAGS is a mitochondrial enzyme catalyzing the formation of NAG from acetylcoenzyme A and L-glutamate. NAGS is an essential allosteric activator of carbamylphosphate synthase I, the first and rate limiting enzyme of the urea cycle. Domain architecture of ureogenic and fungal NAGS consists of an N-terminal NAG kinase-like domain and a C-terminal DUF619 domain. The DUF619 domain function has yet to be characterized.
Probab=91.15 E-value=0.36 Score=32.58 Aligned_cols=44 Identities=16% Similarity=0.229 Sum_probs=34.5
Q ss_pred CeeEEEEEEecccccccChHHHHHHHHHHHHHHcCCcEEEEEeecCCcc
Q 026519 144 GIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDFNNLG 192 (237)
Q Consensus 144 ~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~g~~~i~l~~~~~N~~ 192 (237)
...+|+.++|.++.||+|+|..+++.+.+... .+.-.+.++|+.
T Consensus 33 ~~~yLdKfaV~~~~~g~gv~d~vf~~i~~d~~-----~L~Wrsr~~n~~ 76 (99)
T cd04265 33 GVPYLDKFAVSSSAQGEGTGEALWRRLRRDFP-----KLFWRSRSTNPI 76 (99)
T ss_pred CceEEEEEEEchhhhhcChHHHHHHHHHhhCC-----ceEEEeCCCCcc
Confidence 45899999999999999999999998876643 444556666653
No 110
>PLN03239 histone acetyltransferase; Provisional
Probab=89.49 E-value=1.2 Score=37.01 Aligned_cols=32 Identities=19% Similarity=0.160 Sum_probs=28.3
Q ss_pred EEEEEEecccccccChHHHHHHHHHHHHHHcC
Q 026519 147 YISNVAVREKFRRKGIAKRLIAKAEAQARGWG 178 (237)
Q Consensus 147 ~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~g 178 (237)
-+.-|.|.|.||++|+|+.|++...+..+..|
T Consensus 215 NLaCIltLPpyQrkGyG~lLI~fSYeLSr~Eg 246 (351)
T PLN03239 215 NLACILTFPAHQRKGYGRFLIAFSYELSKKEE 246 (351)
T ss_pred ceEEEEecChhhhcchhhhhHhhhhHhhhhcC
Confidence 46668999999999999999999999987665
No 111
>PF04768 DUF619: Protein of unknown function (DUF619); InterPro: IPR006855 This region of unknown function is found at the C terminus of Neurospora crassa acetylglutamate synthase (2.7.2.8 from EC). It is also found C-terminal to the amino acid kinase region in some fungal acetylglutamate kinase enzymes (IPR001048 from INTERPRO). These enzymes play a role in arginine biosynthesis.; PDB: 3S6K_A 4AB7_F 3ZZF_B 3ZZI_D 3ZZH_A 3ZZG_A 3S6G_Y 3S6H_A 3S7Y_A.
Probab=89.46 E-value=4.5 Score=30.22 Aligned_cols=56 Identities=16% Similarity=0.208 Sum_probs=38.9
Q ss_pred CCeeEEEEEEecccccccChHHHHHHHHHHHHHHcCCcEEEEEeecCCcchHhHHh-h-CCCeE
Q 026519 143 TGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDFNNLGATKLYK-G-QGFKC 204 (237)
Q Consensus 143 ~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~g~~~i~l~~~~~N~~a~~fy~-k-~GF~~ 204 (237)
+...++..++|.+..+|.|++..+.+.+.+.. +.+.-.+..+|+ ..++|- | .|+-.
T Consensus 86 ~~v~yLdKFav~~~~~g~gv~D~vf~~i~~d~-----p~L~Wrsr~~n~-~~~Wyf~rs~G~~~ 143 (170)
T PF04768_consen 86 GPVPYLDKFAVSKSAQGSGVADNVFNAIRKDF-----PKLFWRSREDNP-NNKWYFERSDGSFK 143 (170)
T ss_dssp TSEEEEEEEEE-HHHHHTTHHHHHHHHHHHH------SSEEEEEETT-T-THHHHHHH-SEEEE
T ss_pred CCCeEEEEEEecchhhhcCHHHHHHHHHHHhc-----cceEEEecCCCC-cccEEEEeeEEEEE
Confidence 45699999999999999999999999985543 335555666665 556653 3 36554
No 112
>PTZ00064 histone acetyltransferase; Provisional
Probab=89.16 E-value=1 Score=39.06 Aligned_cols=33 Identities=18% Similarity=0.178 Sum_probs=28.9
Q ss_pred EEEEEEecccccccChHHHHHHHHHHHHHHcCC
Q 026519 147 YISNVAVREKFRRKGIAKRLIAKAEAQARGWGC 179 (237)
Q Consensus 147 ~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~g~ 179 (237)
-+.-|.|.|.||++|+|+.|++...+..+..|.
T Consensus 386 NLACILtLPpyQRKGYGklLIdfSYeLSrrEgk 418 (552)
T PTZ00064 386 NLACILTLPCYQRKGYGKLLVDLSYKLSLKEGK 418 (552)
T ss_pred ceEEEEecchhhhcchhhhhhhhhhhhhhhcCC
Confidence 466689999999999999999999999887653
No 113
>PF02474 NodA: Nodulation protein A (NodA); InterPro: IPR003484 Rhizobial nodulation (Nod) factors are signalling molecules secreted by root-nodulating rhizobia in response to flavanoids excreted by the host plant. They induce various symbiotic responses on the roots of the leguminous host plant at low concentrations, and are required for successful infection. Rhizobial Nod factors are lipo-chitooligosaccharides carrying various substituents which are important determinants of host specificity []. NodA is an N-acyl transferase which specifies the transfer of an acyl chain to the oligosaccharide backbone of Nod factor. Allelic variation of the nodA gene can contribute to the determination of host range [].; GO: 0016746 transferase activity, transferring acyl groups
Probab=86.66 E-value=1.3 Score=32.78 Aligned_cols=53 Identities=11% Similarity=0.009 Sum_probs=43.5
Q ss_pred eeEEEEEEecccccccChHHHHHHHHHHHHHHcCCcEEEEEeecCCcchHhHHhhCC
Q 026519 145 IAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDFNNLGATKLYKGQG 201 (237)
Q Consensus 145 ~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~g~~~i~l~~~~~N~~a~~fy~k~G 201 (237)
.++++..+|.|+.+|.||+..| ..+.-.+.+.|..-.+..|.+ +..+.+++++
T Consensus 85 VaElGLygVRpDLEGlGi~hs~-r~m~PvLq~LgVPF~FGtVR~---al~~Hv~R~~ 137 (196)
T PF02474_consen 85 VAELGLYGVRPDLEGLGISHSM-RVMYPVLQELGVPFGFGTVRH---ALRNHVERLC 137 (196)
T ss_pred EEEEEEEEeeccccccccchhh-hhhhhHHHhcCCCeecccchH---HHHHHHHHHh
Confidence 4788889999999999999976 688888899998887777765 5666666654
No 114
>PF13444 Acetyltransf_5: Acetyltransferase (GNAT) domain
Probab=86.21 E-value=2.8 Score=28.19 Aligned_cols=54 Identities=19% Similarity=0.147 Sum_probs=33.7
Q ss_pred ceEEEEEeccccCccCC-----CCCcccc-ccCCCCCeeEEEEEEecccccccChHHHHH
Q 026519 114 YVAGILTVDTVADFLPR-----KGPLRQR-SSFHRTGIAYISNVAVREKFRRKGIAKRLI 167 (237)
Q Consensus 114 ~ivG~~~~~~~~~~~~~-----~~~~~~~-~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll 167 (237)
++||++.+.......+. ....... ........++|+.++|+|+||+......|+
T Consensus 41 ~~VGt~Rl~~~~~~~~~~~~~~~~~f~l~~~~~~~~~~~EisRl~V~~~~R~~~~~~~L~ 100 (101)
T PF13444_consen 41 EVVGTVRLILPSPAGPLEGFYSESEFDLDPLLPLPRRVAEISRLCVHPEYRRRKVLLLLW 100 (101)
T ss_pred CEEEEEEeeccccccccccCCchhhcCcchhhccCCcEEEeehheECHhHCCChHHHHHh
Confidence 58999888655432211 0111100 011234899999999999999988777764
No 115
>COG5092 NMT1 N-myristoyl transferase [Lipid metabolism]
Probab=86.03 E-value=9 Score=31.41 Aligned_cols=144 Identities=10% Similarity=0.071 Sum_probs=80.7
Q ss_pred eeeeccccCHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhccccccccceeeEEEEECCccceeEEeecCccccccc
Q 026519 25 VVREARIEDIWEVAETHCSCFFPNYTFPLDLMLRVDRLVAMLSGFTVQHGTRRTCLVAVVGSRMDETFFLGSEDFKVGGL 104 (237)
Q Consensus 25 ~iR~~~~~D~~~l~~l~~~~f~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~g~ 104 (237)
+|..++...++++..++++.+.++-....-+ ....++.+ ..+..|.+..+-++..+..+
T Consensus 83 ~idv~N~~ql~dv~~lL~eNYVED~~ag~rf-~Y~~EFl~--Wal~~pg~kK~whigvRvk~------------------ 141 (451)
T COG5092 83 VIDVANKKQLEDVFVLLEENYVEDIYAGHRF-RYSVEFLQ--WALDGPGGKKRWHIGVRVKG------------------ 141 (451)
T ss_pred eEeccccchhHHHHHHHHhhhhhhhhhhhHH-HHHHHHHH--HhhcCCCCceeeEEEEEEcc------------------
Confidence 5777888889999999887764432211111 11112212 22333444444444433332
Q ss_pred CCcccccCCceEEEEEeccccCccCCCCCccccccCCCCCeeEEEEEEecccccccChHHHHHHHHHHHHHHcCCcE-EE
Q 026519 105 DGKFSLHRGYVAGILTVDTVADFLPRKGPLRQRSSFHRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRS-IA 183 (237)
Q Consensus 105 ~~~~~~~~~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~g~~~-i~ 183 (237)
..++||++...+..-.... .....+++.-+||+.+.|++-+.--|++.+...|...|+-+ ++
T Consensus 142 -------t~klVaFIsa~p~~v~vRg----------K~~~~~evNFLCihk~lRsKRltPvLIkEiTRR~n~~~iw~avy 204 (451)
T COG5092 142 -------TQKLVAFISAKPHLVSVRG----------KRSSVLEVNFLCIHKELRSKRLTPVLIKEITRRANVDGIWRAVY 204 (451)
T ss_pred -------cceeEEEEecceeEEEEcc----------cccccceEEEEEEehhhhhCccchHHHHHHHHhhhhhhhHHHhh
Confidence 2577887776443211110 12335889999999999999999999999999887655432 11
Q ss_pred E--EeecCCcchHhHHhh-CCCeEee
Q 026519 184 L--HCDFNNLGATKLYKG-QGFKCVK 206 (237)
Q Consensus 184 l--~~~~~N~~a~~fy~k-~GF~~~~ 206 (237)
. ...+++.+--+.|.+ +.++..-
T Consensus 205 TaG~~LpspVS~~RY~HRpLNwkkLy 230 (451)
T COG5092 205 TAGTELPSPVSQGRYYHRPLNWKKLY 230 (451)
T ss_pred hccceecCccccchhccCCcCHHHHh
Confidence 1 133444444455444 4444443
No 116
>PLN00104 MYST -like histone acetyltransferase; Provisional
Probab=85.91 E-value=1.2 Score=38.32 Aligned_cols=32 Identities=25% Similarity=0.306 Sum_probs=27.9
Q ss_pred EEEEEEecccccccChHHHHHHHHHHHHHHcC
Q 026519 147 YISNVAVREKFRRKGIAKRLIAKAEAQARGWG 178 (237)
Q Consensus 147 ~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~g 178 (237)
-+.-|.|.|.||++|+|+.|++...+..+..|
T Consensus 308 NLaCIltlP~yQrkGyG~~LI~~SYeLSr~eg 339 (450)
T PLN00104 308 NLACILTLPPYQRKGYGKFLIAFSYELSKREG 339 (450)
T ss_pred ceEEEEecchhhhcchhheehhheehhhhccC
Confidence 46668999999999999999999888887654
No 117
>KOG2696 consensus Histone acetyltransferase type b catalytic subunit [Chromatin structure and dynamics]
Probab=83.75 E-value=1.9 Score=35.91 Aligned_cols=42 Identities=14% Similarity=0.158 Sum_probs=32.4
Q ss_pred eEEEEEEecccccccChHHHHHHHHHHHHHHcCCcEEEEEeec
Q 026519 146 AYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDF 188 (237)
Q Consensus 146 ~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~g~~~i~l~~~~ 188 (237)
..|..+.+.|.|||+|+|+.|++.+.....+. ...+-+++..
T Consensus 218 ~RiSQmlilpPfq~~Glgs~l~E~i~r~~~~~-p~v~DiTVEd 259 (403)
T KOG2696|consen 218 PRISQMLILPPFQGKGLGSQLYEAIARDYLEE-PTVLDITVED 259 (403)
T ss_pred hhhheeEEeccccCCchHHHHHHHHHHhhccC-CceeEEEecC
Confidence 55888999999999999999999999666543 3345555554
No 118
>KOG4601 consensus Uncharacterized conserved protein [Function unknown]
Probab=81.37 E-value=1.8 Score=33.60 Aligned_cols=80 Identities=15% Similarity=0.145 Sum_probs=47.0
Q ss_pred CceEEEEEeccccCccCCCCCccccccCCCCCeeEEEEEEecccccccChHHHHHHHHHHHHHHcCCcEEEEEeecCCcc
Q 026519 113 GYVAGILTVDTVADFLPRKGPLRQRSSFHRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDFNNLG 192 (237)
Q Consensus 113 ~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~g~~~i~l~~~~~N~~ 192 (237)
+.+.|++-+....-+........ + .....-|..++|+++.|+.|-|..|++++++.= +..--.+.++-....
T Consensus 81 s~l~GllKVG~KkLfl~D~~~~~----y-e~e~lcILDFyVheS~QR~G~G~~lfdyMl~kE---~vephQ~a~DrPS~k 152 (264)
T KOG4601|consen 81 SILKGLLKVGYKKLFLTDNEQNQ----Y-EEEALCILDFYVHESEQRSGNGFKLFDYMLKKE---NVEPHQCAFDRPSAK 152 (264)
T ss_pred hheeeeehccceeEEEeccHhhh----h-ccCCceEEEEEeehhhhhcCchHHHHHHHHHhc---CCCchheeccChHHH
Confidence 56777777654332222221111 1 233355777999999999999999999988752 222222333332234
Q ss_pred hHhHHhhC
Q 026519 193 ATKLYKGQ 200 (237)
Q Consensus 193 a~~fy~k~ 200 (237)
...|.+|.
T Consensus 153 Ll~Fm~kh 160 (264)
T KOG4601|consen 153 LLQFMEKH 160 (264)
T ss_pred HHHHHHHh
Confidence 57787764
No 119
>KOG2747 consensus Histone acetyltransferase (MYST family) [Chromatin structure and dynamics]
Probab=80.20 E-value=3.5 Score=34.88 Aligned_cols=33 Identities=24% Similarity=0.277 Sum_probs=27.6
Q ss_pred eEEEEEEecccccccChHHHHHHHHHHHHHHcC
Q 026519 146 AYISNVAVREKFRRKGIAKRLIAKAEAQARGWG 178 (237)
Q Consensus 146 ~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~g 178 (237)
.-+.-|.|.|.||++|+|+.|++...+.-+..|
T Consensus 261 yNlaCILtLPpyQRkGYGklLIdFSYeLSr~E~ 293 (396)
T KOG2747|consen 261 YNLACILTLPPYQRKGYGKLLIDFSYELSRREG 293 (396)
T ss_pred cceeeeeecChhhhcccchhhhhhhhhhhcccC
Confidence 346668999999999999999999888886543
No 120
>PF02799 NMT_C: Myristoyl-CoA:protein N-myristoyltransferase, C-terminal domain; InterPro: IPR022677 Myristoyl-CoA:protein N-myristoyltransferase (2.3.1.97 from EC) (Nmt) [] is the enzyme responsible for transferring a myristate group on the N-terminal glycine of a number of cellular eukaryotics and viral proteins. Nmt is a monomeric protein of about 50 to 60kDa whose sequence appears to be well conserved. The N and C-terminal domains of NMT are structurally similar, each adopting an acyl-CoA N-acyltransferase-like fold. This entry represents the C-terminal region.; GO: 0004379 glycylpeptide N-tetradecanoyltransferase activity; PDB: 2P6G_B 2P6F_F 2P6E_A 1IIC_A 1IID_A 2NMT_A 2WUU_A 1IYL_B 1NMT_B 1IYK_A ....
Probab=78.28 E-value=28 Score=26.55 Aligned_cols=41 Identities=17% Similarity=0.072 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHHHHcCCcEEEEEeecCCcchHhHHhhCCCeEee
Q 026519 163 AKRLIAKAEAQARGWGCRSIALHCDFNNLGATKLYKGQGFKCVK 206 (237)
Q Consensus 163 g~~Ll~~~~~~~~~~g~~~i~l~~~~~N~~a~~fy~k~GF~~~~ 206 (237)
-..|++.++-.|++.|+.....-...+|. .|.+.++|..-.
T Consensus 124 l~~Lm~DaLi~Ak~~gfDVFNaLd~mdN~---~fL~~lKFg~Gd 164 (190)
T PF02799_consen 124 LKELMNDALILAKNEGFDVFNALDLMDNS---SFLEDLKFGPGD 164 (190)
T ss_dssp HHHHHHHHHHHHHHTTESEEEEESTTTGG---GTTTTTT-EEEE
T ss_pred HHHHHHHHHHHHHHcCCCEEehhhhccch---hhHhhCCccCCC
Confidence 35788999999999999988877777775 489999998653
No 121
>KOG2779 consensus N-myristoyl transferase [Lipid transport and metabolism]
Probab=78.08 E-value=18 Score=30.24 Aligned_cols=41 Identities=17% Similarity=0.038 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHHHHcCCcEEEEEeecCCcchHhHHhhCCCeEee
Q 026519 163 AKRLIAKAEAQARGWGCRSIALHCDFNNLGATKLYKGQGFKCVK 206 (237)
Q Consensus 163 g~~Ll~~~~~~~~~~g~~~i~l~~~~~N~~a~~fy~k~GF~~~~ 206 (237)
-..|++.++-.++..|+.........+|+ .|.++++|-.-.
T Consensus 356 ~~~lvnDalilak~~gfDVFNAld~meN~---~fl~~LkFg~Gd 396 (421)
T KOG2779|consen 356 LLQLVNDALILAKQKGFDVFNALDLMENE---SFLKDLKFGPGD 396 (421)
T ss_pred HHHHHHHHHHHHHhcCCceeehhhhhhhh---hHHHhcCcCcCC
Confidence 45788888888888899887776666665 488899887543
No 122
>PF09390 DUF1999: Protein of unknown function (DUF1999); InterPro: IPR018987 This family contains a putative Fe-S binding reductase (Q72J89 from SWISSPROT) whose structure adopts an alpha and beta fold. ; PDB: 2D4O_A 2D4P_A.
Probab=77.75 E-value=17 Score=26.20 Aligned_cols=76 Identities=14% Similarity=0.197 Sum_probs=45.4
Q ss_pred CceEEEEEeccccCccCCCCCccccccCCCCCeeEEEEEEecccccccChHHHHHHHHHHHHHHcCCcEEEEEeecCCcc
Q 026519 113 GYVAGILTVDTVADFLPRKGPLRQRSSFHRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDFNNLG 192 (237)
Q Consensus 113 ~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~g~~~i~l~~~~~N~~ 192 (237)
+++.|++.....++ .....+.+..|.+.|. +......-||..+.+.+=..|.-.+.+++.+ +
T Consensus 65 ~~~~GfvLAQaVWQ--------------GdrptVlV~ri~~~~~-~~~~~~~GLLrAvvKSAYDa~VYEv~l~l~p---~ 126 (161)
T PF09390_consen 65 GELQGFVLAQAVWQ--------------GDRPTVLVRRILLAPG-EPEEVYEGLLRAVVKSAYDAGVYEVHLHLDP---E 126 (161)
T ss_dssp TEEEEEEEEEEEE---------------SSSEEEEEEEE---EE-SSHHHHHHHHHHHHHHHHHTT-SEEEE---T---H
T ss_pred CceeeeeehhHHhc--------------CCCceEEEEEeecCCC-CcHHHHHHHHHHHHHhhhccceEEEEeeCCH---H
Confidence 78888887654322 1344577776666554 4457778899999999988899999998887 4
Q ss_pred hHhHHhhCCCeEee
Q 026519 193 ATKLYKGQGFKCVK 206 (237)
Q Consensus 193 a~~fy~k~GF~~~~ 206 (237)
...--+..||...+
T Consensus 127 l~~A~~a~~~~~~~ 140 (161)
T PF09390_consen 127 LEAAARAEGFRLGG 140 (161)
T ss_dssp HHHHHHHTT----S
T ss_pred HHHHHhhcccccCC
Confidence 55556677887655
No 123
>PHA02769 hypothetical protein; Provisional
Probab=76.52 E-value=3 Score=28.62 Aligned_cols=45 Identities=20% Similarity=0.131 Sum_probs=29.1
Q ss_pred HHHHHHH---HHHHHHHcCCcEEEEEeecCCcchHhHHhhCCCeEeecCC
Q 026519 163 AKRLIAK---AEAQARGWGCRSIALHCDFNNLGATKLYKGQGFKCVKVPE 209 (237)
Q Consensus 163 g~~Ll~~---~~~~~~~~g~~~i~l~~~~~N~~a~~fy~k~GF~~~~~~~ 209 (237)
|..|++. +.+.++..|+..+...-.+ .-+..+|.|.||+.+|...
T Consensus 94 gd~lvnfl~~l~~k~~~dg~evlwtlgfp--dhsnaly~kagfk~vg~ts 141 (154)
T PHA02769 94 GDHLVNFLNDLAEKLKKDGFEVLWTLGFP--DHSNALYKKAGFKLVGQTS 141 (154)
T ss_pred hHHHHHHHHHHHHHHhcCCeEEEEEecCC--CcchhHHhhhhhhHhcccc
Confidence 4444444 4455555688765544444 3567899999999998543
No 124
>COG2935 Putative arginyl-tRNA:protein arginylyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=74.70 E-value=20 Score=28.37 Aligned_cols=39 Identities=13% Similarity=0.067 Sum_probs=34.5
Q ss_pred EEecccccccChHHHHHHHHHHHHHHcCCcEEEEEeecC
Q 026519 151 VAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDFN 189 (237)
Q Consensus 151 l~V~p~~rg~Gig~~Ll~~~~~~~~~~g~~~i~l~~~~~ 189 (237)
..-+|++...++|+..+-+-+..|++.|...++|.=.-+
T Consensus 180 ~FydPd~s~~SLGt~~iL~~I~~aq~~~l~yvYLGYwI~ 218 (253)
T COG2935 180 TFYDPDMSKRSLGTLSILDQIAIAQRLGLPYVYLGYWIK 218 (253)
T ss_pred EEeCCChhhhcchHHHHHHHHHHHHHhCCCeEEEEEEEC
Confidence 356999999999999999999999999999999985543
No 125
>KOG3014 consensus Protein involved in establishing cohesion between sister chromatids during DNA replication [Replication, recombination and repair]
Probab=73.50 E-value=6 Score=31.23 Aligned_cols=52 Identities=25% Similarity=0.111 Sum_probs=37.6
Q ss_pred CCCCCeeEEEEEEecccccccChHHHHHHHHHHHHHHc-CCc-EEEEEeecCCc
Q 026519 140 FHRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGW-GCR-SIALHCDFNNL 191 (237)
Q Consensus 140 ~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~-g~~-~i~l~~~~~N~ 191 (237)
.+++..+.|..|.|.+..|++||++.|++-+.....-- -+. .-.+.+.|++.
T Consensus 178 ~~~~~~~GIsRIWV~s~~Rr~gIAs~lldva~~~~~~g~~isr~~iAfs~PTdd 231 (257)
T KOG3014|consen 178 LPEPAICGISRIWVSSLRRRKGIASLLLDVARCNFVYGEVISREEIAFSDPTDD 231 (257)
T ss_pred CCCCcEeeeEEEEeehhhhhhhhHHHHHHHHHHhhhhhcccchhheEecCCCch
Confidence 34567899999999999999999999999887766432 111 22244666654
No 126
>PF09924 DUF2156: Uncharacterized conserved protein (DUF2156); InterPro: IPR024320 This domain of unknown function is found in uncharacterised proteins and in Lysylphosphatidylglycerol synthetase, which catalyses the transfer of a lysyl group from L-lysyl-tRNA(Lys) to membrane-bound phosphatidylglycerol [].; PDB: 2HQY_A.
Probab=73.48 E-value=43 Score=27.27 Aligned_cols=59 Identities=14% Similarity=0.044 Sum_probs=34.7
Q ss_pred CceEEEEEeccccCccCCCCCccccccCCCCCeeEEEEEEecccccccChHHHHHHHHHHHHHHcCCcEEEEEeec
Q 026519 113 GYVAGILTVDTVADFLPRKGPLRQRSSFHRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDF 188 (237)
Q Consensus 113 ~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~g~~~i~l~~~~ 188 (237)
|+++|++...... ..+.+.++-.--+++ --+|+-..|+..+++.+++.|+..+.|...+
T Consensus 190 gki~af~~~~~~~----------------~~~~~~~~~~k~~~~-a~~G~~e~l~~~~~~~~~~~g~~~lnLg~ap 248 (299)
T PF09924_consen 190 GKIVAFAIGSPLG----------------GRDGWSIDFEKADPD-APKGIYEFLNVEFAEHLKAEGVEYLNLGFAP 248 (299)
T ss_dssp TEEEEEEEEEEEE-----------------TTEEEEEEEEE-TT--STTHHHHHHHHHHHHS--TT--EEE-----
T ss_pred CcEEEEEEEEEcc----------------CCccEEEEEEecCCC-CCCcHHHHHHHHHHHhhhhCCceEEEccccc
Confidence 8899999886532 123344554444555 4579999999999999998899988866544
No 127
>PF11090 DUF2833: Protein of unknown function (DUF2833); InterPro: IPR020335 This entry contains proteins with no known function.
Probab=69.03 E-value=14 Score=24.07 Aligned_cols=43 Identities=9% Similarity=-0.016 Sum_probs=30.3
Q ss_pred hHHHHHHHHHHHHHHcCCcEEEEEeecCCcchHhHHhhCCCeEee
Q 026519 162 IAKRLIAKAEAQARGWGCRSIALHCDFNNLGATKLYKGQGFKCVK 206 (237)
Q Consensus 162 ig~~Ll~~~~~~~~~~g~~~i~l~~~~~N~~a~~fy~k~GF~~~~ 206 (237)
.-+.+..++-...+. +..+.=.|...|...++|.+++|++...
T Consensus 41 F~k~i~~~~d~~l~~--Y~~l~N~V~~~N~~HIRfLk~lGA~f~~ 83 (86)
T PF11090_consen 41 FRKLIKEYLDKMLKQ--YPVLWNFVWVGNKSHIRFLKSLGAVFHN 83 (86)
T ss_pred HHHHHHHHHHHHHHH--hhheeEEEEeCCHHHHHHHHhcCcEEcc
Confidence 334444443333333 5667888999999999999999998654
No 128
>COG5630 ARG2 Acetylglutamate synthase [Amino acid transport and metabolism]
Probab=68.86 E-value=29 Score=29.38 Aligned_cols=34 Identities=15% Similarity=0.326 Sum_probs=29.7
Q ss_pred CCCeeEEEEEEecccccc-cChHHHHHHHHHHHHH
Q 026519 142 RTGIAYISNVAVREKFRR-KGIAKRLIAKAEAQAR 175 (237)
Q Consensus 142 ~~~~~~i~~l~V~p~~rg-~Gig~~Ll~~~~~~~~ 175 (237)
+.+..|++.++|.++.+| .||+..+.+-+-+..-
T Consensus 397 ~~~vpYLDKfAVl~~aQGs~gisd~vfniM~e~fP 431 (495)
T COG5630 397 ENNVPYLDKFAVLDDAQGSEGISDAVFNIMREEFP 431 (495)
T ss_pred CCCCcceeeeeccccccccchHHHHHHHHHHHhCc
Confidence 456789999999999999 8999999998877765
No 129
>PF12261 T_hemolysin: Thermostable hemolysin; InterPro: IPR022050 This family of proteins is found in bacteria. Proteins in this family are typically between 200 and 228 amino acids in length. T_hemolysin is a pore-forming toxin of bacteria, able to lyse erythrocytes from a number of mammalian species.
Probab=68.70 E-value=27 Score=26.33 Aligned_cols=59 Identities=19% Similarity=0.211 Sum_probs=47.8
Q ss_pred CCCCeeEEEEEEecccccccChHHHHHHHHHHHHHHcCCcEEEEEeecCCcchHhHHhhCCCeEee
Q 026519 141 HRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDFNNLGATKLYKGQGFKCVK 206 (237)
Q Consensus 141 ~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~g~~~i~l~~~~~N~~a~~fy~k~GF~~~~ 206 (237)
.....++|++++.. +.|.+..|+..+...+...|++.+..+.. ....+.+.|+|.....
T Consensus 83 ~R~~IvEvGnLAs~----~~g~~~~l~~~l~~~L~~~g~~w~vfTaT---~~lr~~~~rlgl~~~~ 141 (179)
T PF12261_consen 83 SRSQIVEVGNLASF----SPGAARLLFAALAQLLAQQGFEWVVFTAT---RQLRNLFRRLGLPPTV 141 (179)
T ss_pred chhheeEeechhhc----CcccHHHHHHHHHHHHHHCCCCEEEEeCC---HHHHHHHHHcCCCcee
Confidence 34677888888765 47999999999999999999998655433 4789999999998775
No 130
>cd04266 DUF619-NAGS-FABP DUF619 domain of N-acetylglutamate Synthase of the fungal arginine-biosynthetic pathway. DUF619-NAGS-FABP: This family includes the DUF619 domain of N-acetylglutamate synthase (NAGS) of the fungal arginine-biosynthetic pathway (FABP). This NAGS (also known as arginine-requiring protein 2 or ARG2) consists of an N-terminal NAG kinase-like domain and a C-terminal DUF619 domain. NAGS catalyzes the formation of NAG from acetylcoenzyme A and L-glutamate. The DUF619 domain, yet to be characterized, is predicted to function in NAGS association in fungi.
Probab=66.37 E-value=16 Score=25.10 Aligned_cols=49 Identities=27% Similarity=0.285 Sum_probs=36.3
Q ss_pred CCeeEEEEEEecccccc-cChHHHHHHHHHHHHHHcCCcE-EEEEeecCCcchHhHH
Q 026519 143 TGIAYISNVAVREKFRR-KGIAKRLIAKAEAQARGWGCRS-IALHCDFNNLGATKLY 197 (237)
Q Consensus 143 ~~~~~i~~l~V~p~~rg-~Gig~~Ll~~~~~~~~~~g~~~-i~l~~~~~N~~a~~fy 197 (237)
....++..++|.+..|| .|++..+.+.+.+. +.. +.-.+..+|+. .++|
T Consensus 37 ~~v~yLdKFav~~~~~gl~gv~D~vf~~m~~~-----fp~~L~Wrsr~~n~~-n~Wy 87 (108)
T cd04266 37 EKIAYLDKFAVLPKAQGSDGIADILFNAMLDG-----FPNELIWRSRKDNPV-NKWY 87 (108)
T ss_pred CCceEEEEEEEccccccccchHHHHHHHHHHc-----CCCceEEEeCCCCcc-cceE
Confidence 45589999999999997 89999999988772 333 55566666664 3443
No 131
>PF11039 DUF2824: Protein of unknown function (DUF2824); InterPro: IPR022568 This family of proteins has no known function. Members of the family are found in P22-like viruses and bacteria. Some of the phage members have been annotated as head assembly proteins, but this has not been confirmed.
Probab=66.15 E-value=45 Score=23.73 Aligned_cols=80 Identities=11% Similarity=-0.009 Sum_probs=51.8
Q ss_pred CceEEEEEeccccCccCCCCCccccccCCCCCeeEEEEEEecccccccChHHHHHHHHHHHHHHc-CCcEEEEEeecCCc
Q 026519 113 GYVAGILTVDTVADFLPRKGPLRQRSSFHRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGW-GCRSIALHCDFNNL 191 (237)
Q Consensus 113 ~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~-g~~~i~l~~~~~N~ 191 (237)
..++|+..+...+.. .++.+ -.-+|++|| ++...-.....|+-++ .+..+...+-..-.
T Consensus 47 ~~l~Gi~~v~~i~~~-----------------~vecH-a~y~P~fRG--~a~~~~~~F~kwlL~Ns~f~~vit~vp~kt~ 106 (151)
T PF11039_consen 47 GQLGGIVYVEEIQPS-----------------VVECH-AMYDPGFRG--YALEIGRLFCKWLLENSPFQNVITFVPDKTR 106 (151)
T ss_pred eEEEEEEEEEEEeee-----------------eEEEE-eeeccccch--hHHHHHHHHHHHHhcCCceeEEEEecccccc
Confidence 677788777654221 23444 456899999 8887777888888765 44443333322333
Q ss_pred chHhHHhhCCCeEeecCCCCC
Q 026519 192 GATKLYKGQGFKCVKVPEGAN 212 (237)
Q Consensus 192 ~a~~fy~k~GF~~~~~~~~~~ 212 (237)
-..-.-+=+|.+.+|.+++++
T Consensus 107 ~Grvic~llg~~RVG~id~~~ 127 (151)
T PF11039_consen 107 YGRVICRLLGARRVGHIDDYF 127 (151)
T ss_pred cchhHhhhhCCceeeeHHHHh
Confidence 445555557999999999864
No 132
>PHA01733 hypothetical protein
Probab=63.82 E-value=10 Score=27.65 Aligned_cols=46 Identities=22% Similarity=0.128 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHH-cCCcEEEEEeecCCcchHhHHhhCCCeEeecCCC
Q 026519 165 RLIAKAEAQARG-WGCRSIALHCDFNNLGATKLYKGQGFKCVKVPEG 210 (237)
Q Consensus 165 ~Ll~~~~~~~~~-~g~~~i~l~~~~~N~~a~~fy~k~GF~~~~~~~~ 210 (237)
.++.++-.+..+ ..+..+.-.|+..|..+++|.+.+||+.....+.
T Consensus 89 ~f~re~r~~l~e~~~Yp~LwNyV~~~N~~hir~Lk~lGF~f~~~~~~ 135 (153)
T PHA01733 89 ALLRGAKWWLPKSRNYDLLWNIVDKRNLVHRKLLRKLGFKGLRYVQP 135 (153)
T ss_pred HHHHHHHHHHHHhccccHHHHhHhcccHHHHHHHHHcCceeeccccc
Confidence 344444444432 3667777789999999999999999999886543
No 133
>PF04339 DUF482: Protein of unknown function, DUF482; InterPro: IPR007434 This family contains several proteins of uncharacterised function.
Probab=59.54 E-value=75 Score=27.07 Aligned_cols=128 Identities=13% Similarity=0.045 Sum_probs=68.6
Q ss_pred Cceeeec-----cccCHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhccccccccceeeEEEEECCccc-eeEEeec
Q 026519 23 EIVVREA-----RIEDIWEVAETHCSCFFPNYTFPLDLMLRVDRLVAMLSGFTVQHGTRRTCLVAVVGSRMD-ETFFLGS 96 (237)
Q Consensus 23 ~l~iR~~-----~~~D~~~l~~l~~~~f~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~v~~ 96 (237)
.++++.. ++++++.+.+++...+...|..+. ...+.+..+... .++ ..++++.
T Consensus 199 Gi~~~~l~G~~i~~~~~~~f~~~Y~~Ty~k~~~~~y---Lt~~FF~~l~~~------------------m~~~~~l~~A~ 257 (370)
T PF04339_consen 199 GIRIRTLTGDEITDEDWDRFYRLYQNTYAKRWGRPY---LTREFFEQLAET------------------MPEQVVLVVAR 257 (370)
T ss_pred CCEEEEEeCCCCCHHHHHHHHHHHHHHHHhhCCChh---hcHHHHHHHHHh------------------CcCCEEEEEEE
Confidence 3555554 456678888898888877766442 011112122111 111 2233333
Q ss_pred CcccccccCCcccccCCceEEEEEeccccCccCCCCCccccccCCCCCeeEEEEEEecccccccChHHHHHHHHHHHHHH
Q 026519 97 EDFKVGGLDGKFSLHRGYVAGILTVDTVADFLPRKGPLRQRSSFHRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARG 176 (237)
Q Consensus 97 ~~~~~~g~~~~~~~~~~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~ 176 (237)
.+ +++||+..+-...+ ..+-.-.+...++.+.-.- ...=..+++|.+
T Consensus 258 ~~--------------g~~Va~aL~l~~~~------------------~LyGRYwG~~~~~~~LHFe-~cYYq~Ie~aI~ 304 (370)
T PF04339_consen 258 RD--------------GQPVAFALCLRGDD------------------TLYGRYWGCDEEIPFLHFE-LCYYQGIEYAIE 304 (370)
T ss_pred EC--------------CeEEEEEEEEEeCC------------------EEEEeeecccccccCcchH-HHHHHHHHHHHH
Confidence 33 78888776643322 2332223334444444432 234568999999
Q ss_pred cCCcEEEEEeecCCcchHhHHhhCCCeEeecCCC
Q 026519 177 WGCRSIALHCDFNNLGATKLYKGQGFKCVKVPEG 210 (237)
Q Consensus 177 ~g~~~i~l~~~~~N~~a~~fy~k~GF~~~~~~~~ 210 (237)
+|++.+...+..+. =..+||+++.+-..
T Consensus 305 ~Gl~~f~~GaqGEH------K~~RGf~P~~t~S~ 332 (370)
T PF04339_consen 305 HGLRRFEPGAQGEH------KIARGFEPVPTYSA 332 (370)
T ss_pred cCCCEEECCcchhH------HHHcCCccccceee
Confidence 99998766543221 23579999876443
No 134
>PRK00756 acyltransferase NodA; Provisional
Probab=58.94 E-value=20 Score=26.56 Aligned_cols=43 Identities=16% Similarity=0.110 Sum_probs=34.9
Q ss_pred eeEEEEEEecccccccChHHHHHHHHHHHHHHcCCcEEEEEeec
Q 026519 145 IAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDF 188 (237)
Q Consensus 145 ~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~g~~~i~l~~~~ 188 (237)
.++++..+|.|+..|.||+..+ ..+.-.+.+.|..-..-.|.+
T Consensus 85 VaElGLygVRpDLEGlGi~~S~-r~m~PvLq~LgVPF~FGtVR~ 127 (196)
T PRK00756 85 VAELGLYGVRPDLEGLGIAHSI-RAMYPVLQELGVPFAFGTVRH 127 (196)
T ss_pred EEEeeeeeeccccccccchhhH-HHHHHHHHhcCCCeecccchH
Confidence 4788889999999999999876 678888888887766665654
No 135
>PTZ00129 40S ribosomal protein S14; Provisional
Probab=58.18 E-value=54 Score=23.89 Aligned_cols=54 Identities=13% Similarity=0.171 Sum_probs=42.4
Q ss_pred HHHHHHHHHHHHHHcCCcEEEEEe-----------ecCCcchHhHHhhCCCeEeecCCCCCCCCC
Q 026519 163 AKRLIAKAEAQARGWGCRSIALHC-----------DFNNLGATKLYKGQGFKCVKVPEGANWPQP 216 (237)
Q Consensus 163 g~~Ll~~~~~~~~~~g~~~i~l~~-----------~~~N~~a~~fy~k~GF~~~~~~~~~~~~~~ 216 (237)
+....+.+.+.+.++|++.+.+.+ -+..++|++-..+.|+++....+..+.+.+
T Consensus 74 Aq~aa~~~a~k~~~~Gi~~v~V~vr~~gg~~~kg~GpGr~~airaL~~~glkI~~I~DvTPiPhN 138 (149)
T PTZ00129 74 AMMAAQDVAARCKELGINALHIKLRATGGVRTKTPGPGAQAALRALARAGLKIGRIEDVTPIPTD 138 (149)
T ss_pred HHHHHHHHHHHHHHcCCeEEEEEEEecCCCCCCCCCCCHHHHHHHHHHCCCEEEEEEecCCCCCC
Confidence 345566788888889999999888 567778999999999999887666655433
No 136
>COG5027 SAS2 Histone acetyltransferase (MYST family) [Chromatin structure and dynamics]
Probab=57.43 E-value=6 Score=32.83 Aligned_cols=30 Identities=17% Similarity=0.236 Sum_probs=23.8
Q ss_pred eEEEEEEecccccccChHHHHHHHHHHHHH
Q 026519 146 AYISNVAVREKFRRKGIAKRLIAKAEAQAR 175 (237)
Q Consensus 146 ~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~ 175 (237)
.-+.-|.+.|.||++|+|+.|++......+
T Consensus 263 yNLaCILtLP~yQRrGYG~lLIdFSY~Ls~ 292 (395)
T COG5027 263 YNLACILTLPPYQRRGYGKLLIDFSYLLSQ 292 (395)
T ss_pred CceEEEEecChhHhcccceEeeeeeeeccc
Confidence 446668899999999999999976555544
No 137
>PF07395 Mig-14: Mig-14; InterPro: IPR009977 This family contains a number of bacterial mig-14 proteins (approximately 270 residues long). In Salmonella, mig-14 contributes to resistance to antimicrobial peptides, although the mechanism is not fully understood [].
Probab=57.34 E-value=55 Score=26.37 Aligned_cols=109 Identities=17% Similarity=0.012 Sum_probs=66.0
Q ss_pred eeeeccccCHHHHHHHhhccCCCCCCCCchhHHHHHHHHHHHhccccccccceeeEEEEECCccceeEEeecCccccccc
Q 026519 25 VVREARIEDIWEVAETHCSCFFPNYTFPLDLMLRVDRLVAMLSGFTVQHGTRRTCLVAVVGSRMDETFFLGSEDFKVGGL 104 (237)
Q Consensus 25 ~iR~~~~~D~~~l~~l~~~~f~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~g~ 104 (237)
.|+++.+=..++++.++.+-|...|.........+.++...+.++- ...|.-.
T Consensus 128 ~v~~v~~~S~~Ela~iY~~Lf~~Rwg~~~~~~~~l~e~f~~Lr~~~-------fG~vL~l-------------------- 180 (264)
T PF07395_consen 128 SVRPVSEFSPEELADIYIDLFQKRWGFRCYGKEHLAEFFSELRHMI-------FGSVLFL-------------------- 180 (264)
T ss_pred EEEEHHHCCHHHHHHHHHHHHHHHhCCCCCcHHHHHHHHHHhHHhh-------eeeEEEE--------------------
Confidence 6788888888899999999898888876554444444444443210 0111111
Q ss_pred CCcccccCCceEEEEEeccccCccCCCCCccccccCCCCCeeEEEEEEecccccccChHHHHH----HHHHHHHHHcCCc
Q 026519 105 DGKFSLHRGYVAGILTVDTVADFLPRKGPLRQRSSFHRTGIAYISNVAVREKFRRKGIAKRLI----AKAEAQARGWGCR 180 (237)
Q Consensus 105 ~~~~~~~~~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll----~~~~~~~~~~g~~ 180 (237)
+++++++-.+.... ...| =.+..-..++||+++..-.|+.|+ +.+.++|++.|..
T Consensus 181 -------~~~P~Aiqlv~k~e-----s~~w---------v~~D~iNgG~Dp~~~~~SpGSiL~w~Ni~~A~~~~~~~~k~ 239 (264)
T PF07395_consen 181 -------NGQPCAIQLVYKVE-----SPKW---------VYFDYINGGYDPECRDFSPGSILMWLNIQDAWEYCRAQGKP 239 (264)
T ss_pred -------CCcceEEEEEEEec-----CCCe---------EEEecccCccCcccccCCCccEEEEeeHHHHHHHHHHhCCc
Confidence 25555554442210 0001 013333467899999999999886 7778888877654
Q ss_pred E
Q 026519 181 S 181 (237)
Q Consensus 181 ~ 181 (237)
-
T Consensus 240 l 240 (264)
T PF07395_consen 240 L 240 (264)
T ss_pred e
Confidence 3
No 138
>COG3473 Maleate cis-trans isomerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=57.08 E-value=19 Score=27.90 Aligned_cols=40 Identities=18% Similarity=0.258 Sum_probs=30.2
Q ss_pred HHHHHHHHcCCcEEEEE---eecCCcchHhHHhhCCCeEeecC
Q 026519 169 KAEAQARGWGCRSIALH---CDFNNLGATKLYKGQGFKCVKVP 208 (237)
Q Consensus 169 ~~~~~~~~~g~~~i~l~---~~~~N~~a~~fy~k~GF~~~~~~ 208 (237)
++++.++..|++++.+. +.+-|.....|++++||+.+...
T Consensus 108 Avv~aL~al~a~ri~vlTPY~~evn~~e~ef~~~~Gfeiv~~~ 150 (238)
T COG3473 108 AVVEALNALGAQRISVLTPYIDEVNQREIEFLEANGFEIVDFK 150 (238)
T ss_pred HHHHHHHhhCcceEEEeccchhhhhhHHHHHHHhCCeEEEEee
Confidence 34556667788877665 44568889999999999999753
No 139
>COG5092 NMT1 N-myristoyl transferase [Lipid metabolism]
Probab=49.40 E-value=74 Score=26.33 Aligned_cols=19 Identities=26% Similarity=0.155 Sum_probs=16.4
Q ss_pred eeeeccccCHHHHHHHhhc
Q 026519 25 VVREARIEDIWEVAETHCS 43 (237)
Q Consensus 25 ~iR~~~~~D~~~l~~l~~~ 43 (237)
-+|++.++|++++++|+.+
T Consensus 260 GlR~~e~kD~~~v~~L~~~ 278 (451)
T COG5092 260 GLRLAEEKDMEDVARLYLE 278 (451)
T ss_pred ccchhhhhCHHHHHHHHHH
Confidence 4899999999999999543
No 140
>cd03173 DUF619-like DUF619 domain of various N-acetylglutamate Kinases and N-acetylglutamate Synthases. DUF619-like: This family includes the DUF619 domain of various N-acetylglutamate synthases (NAGS) of the urea cycle found in humans and fish, the DUF619 domain of the NAGS of the fungal arginine-biosynthetic pathway (FABP), as well as the DUF619 domain present C-terminal of a NAG kinase-like domain in a limited number of predicted NAGSs found in bacteria and Dictyostelium. Ureogenic NAGS is a mitochondrial enzyme catalyzing the formation of NAG from acetylcoenzyme A and L-glutamate. NAGS is an essential allosteric activator of carbamylphosphate synthase I, the first and rate limiting enzyme of the urea cycle. Domain architecture of ureogenic and fungal NAGS consists of an N-terminal NAG kinase-like domain and a C-terminal DUF619 domain. This subgroup also includes the DUF619 domain of the FABP N-acetylglutamate kinase (NAGK), the enzyme that catalyzes the second reaction of arginine
Probab=48.35 E-value=35 Score=22.92 Aligned_cols=48 Identities=17% Similarity=0.290 Sum_probs=35.7
Q ss_pred CeeEEEEEEecccccccChHHHHHHHHHHHHHHcCCcEEEEEeecCCcchHhHH
Q 026519 144 GIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDFNNLGATKLY 197 (237)
Q Consensus 144 ~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~g~~~i~l~~~~~N~~a~~fy 197 (237)
...++..++|.+..++.|++..+.+.+.+.. +.+.-.+..+|+. .++|
T Consensus 32 ~v~~LdkFav~~~~~~~gv~D~vf~~i~~d~-----~~L~Wrsr~~n~~-n~Wy 79 (98)
T cd03173 32 SIPYLDKFAVSDHLWLNNVTDNIFNLIRKDF-----PSLLWRVRENDAN-LKWY 79 (98)
T ss_pred CCEEEEEEEEcccccccCHHHHHHHHHHhhC-----CeeEEEeCCCCCc-cceE
Confidence 3589999999999999999999999877653 3455556666653 3444
No 141
>PRK02983 lysS lysyl-tRNA synthetase; Provisional
Probab=47.56 E-value=1.1e+02 Score=30.33 Aligned_cols=59 Identities=15% Similarity=0.192 Sum_probs=46.8
Q ss_pred CCceEEEEEeccccCccCCCCCccccccCCCCCeeEEEEEEecccccccChHHHHHHHHHHHHHHcCCcEEEEEeec
Q 026519 112 RGYVAGILTVDTVADFLPRKGPLRQRSSFHRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDF 188 (237)
Q Consensus 112 ~~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~g~~~i~l~~~~ 188 (237)
+|+++|++.+.... .+.+.++.+--+|+. -+|+-..|+-.+++++++.|++.+.|...+
T Consensus 429 ~G~i~af~s~~p~~-----------------~~g~slDLMRr~pda-pnGvmE~L~~~l~~~~k~~G~~~~sLg~AP 487 (1094)
T PRK02983 429 DGQVVALLSFVPWG-----------------RRGLSLDLMRRSPDA-PNGVIELMVAELALEAESLGITRISLNFAV 487 (1094)
T ss_pred CCeEEEEEEEeeeC-----------------CCCEEEEecccCCCC-CCCHHHHHHHHHHHHHHHcCCCEEEechhh
Confidence 38999999986521 122667766677775 679999999999999999999999887655
No 142
>PRK15312 antimicrobial resistance protein Mig-14; Provisional
Probab=44.65 E-value=1.1e+02 Score=25.12 Aligned_cols=108 Identities=11% Similarity=0.009 Sum_probs=64.0
Q ss_pred eeeeccccCHHHHHHHhhccCCCCCCCCch--hHHHHHHHHHHHhccccccccceeeEEEEECCccceeEEeecCccccc
Q 026519 25 VVREARIEDIWEVAETHCSCFFPNYTFPLD--LMLRVDRLVAMLSGFTVQHGTRRTCLVAVVGSRMDETFFLGSEDFKVG 102 (237)
Q Consensus 25 ~iR~~~~~D~~~l~~l~~~~f~~~~~~~~~--~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~ 102 (237)
++|++.+=-.++++.++.+-|...|+.... ....+.++...+.+.- ...|.-.
T Consensus 156 ~v~~is~fS~~Ela~iY~~Lf~~Rwg~~~~~~~~~~l~e~f~~Lr~l~-------fG~VLfl------------------ 210 (298)
T PRK15312 156 SVKSVADCSSDELTHIFIELFRSRFGNTLSCYPADNLANFFSQLRHLL-------FGHILYI------------------ 210 (298)
T ss_pred EEEEhHHCCHHHHHHHHHHHHHHHhCCCCCcccHHHHHHHHHHhHHhh-------eeeEEEE------------------
Confidence 577777777788889988888888887764 4445455444443210 0111111
Q ss_pred ccCCcccccCCceEEEEEeccccCccCCCCCccccccCCCCCeeEEEEEEecccccccChHHHHH----HHHHHHHHHcC
Q 026519 103 GLDGKFSLHRGYVAGILTVDTVADFLPRKGPLRQRSSFHRTGIAYISNVAVREKFRRKGIAKRLI----AKAEAQARGWG 178 (237)
Q Consensus 103 g~~~~~~~~~~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll----~~~~~~~~~~g 178 (237)
+|+++++-.+.... ...| -....-..+|||+++..-+|+.|+ +.+.++|+++|
T Consensus 211 ---------~~~PcA~qlv~k~e-----Sp~w---------i~~D~iNgG~Dpe~~~~spGSIL~WlNi~~A~~~~~~~~ 267 (298)
T PRK15312 211 ---------EGIPCAFDIVLKSE-----SQMN---------VYFDVPNGAVKNECMPLSPGSILMWLNISRARHYCQERQ 267 (298)
T ss_pred ---------CCcceEEEEEEEec-----CCCc---------EEEecccCccCcccccCCCccEEEEecHHHHHHHHHhcC
Confidence 25555554442210 0011 013334468999999999999886 67777777766
Q ss_pred Cc
Q 026519 179 CR 180 (237)
Q Consensus 179 ~~ 180 (237)
.+
T Consensus 268 K~ 269 (298)
T PRK15312 268 KK 269 (298)
T ss_pred Cc
Confidence 54
No 143
>COG2266 GTP:adenosylcobinamide-phosphate guanylyltransferase [Coenzyme metabolism]
Probab=42.55 E-value=64 Score=24.24 Aligned_cols=46 Identities=17% Similarity=0.213 Sum_probs=39.6
Q ss_pred HHHHHHHHHHHHHHcCCcEEEEEeecCCcchHhHHhhCCCeEeecCC
Q 026519 163 AKRLIAKAEAQARGWGCRSIALHCDFNNLGATKLYKGQGFKCVKVPE 209 (237)
Q Consensus 163 g~~Ll~~~~~~~~~~g~~~i~l~~~~~N~~a~~fy~k~GF~~~~~~~ 209 (237)
|+-|+.++++.+++ .+..+++.++++.+.-..+-++.|++.+..-.
T Consensus 26 GkpLI~~v~~al~~-~~d~i~v~isp~tp~t~~~~~~~gv~vi~tpG 71 (177)
T COG2266 26 GKPLIDRVLEALRK-IVDEIIVAISPHTPKTKEYLESVGVKVIETPG 71 (177)
T ss_pred CccHHHHHHHHHHh-hcCcEEEEeCCCCHhHHHHHHhcCceEEEcCC
Confidence 67899999999987 68899999999999999999999988887543
No 144
>TIGR03628 arch_S11P archaeal ribosomal protein S11P. This model describes exclusively the archaeal ribosomal protein S11P. It excludes homologous ribosomal proteins S14 from eukaryotes and S11 from bacteria.
Probab=42.34 E-value=1.1e+02 Score=21.13 Aligned_cols=53 Identities=11% Similarity=0.188 Sum_probs=39.5
Q ss_pred cChHH-HHHHHHHHHHHHcCCcEEEEEeec-----------CCcchHhHHhhCCCeEeecCCCCC
Q 026519 160 KGIAK-RLIAKAEAQARGWGCRSIALHCDF-----------NNLGATKLYKGQGFKCVKVPEGAN 212 (237)
Q Consensus 160 ~Gig~-~Ll~~~~~~~~~~g~~~i~l~~~~-----------~N~~a~~fy~k~GF~~~~~~~~~~ 212 (237)
.-++. ...+.+.+.+.++|++.+.+.+.- ..+.+++-..+.|++.....+..+
T Consensus 44 TpyAAq~aa~~~~~~~~~~Gi~~v~v~ikG~gg~~~~~~G~Gr~~air~l~~~glkI~~I~DvTp 108 (114)
T TIGR03628 44 SPYAAMQAAGRAAEKAKERGITGLHIKVRAPGGNGQKSPGPGAQAAIRALARAGLRIGRIEDVTP 108 (114)
T ss_pred CHHHHHHHHHHHHHHHHHcCCcEEEEEEEecCCCCCCCCCCcHHHHHHHHHHCCCEEEEEEEcCC
Confidence 34444 556778888889999998887744 456789999999999887655443
No 145
>cd07235 MRD Mitomycin C resistance protein (MRD). Mitomycin C (MC) is a naturally occurring antibiotic, and antitumor agent used in the treatment of cancer. Its antitumor activity is exerted primarily through monofunctional and bifunctional alkylation of DNA. MRD binds to MC and functions as a component of the MC exporting system. MC is bound to MRD by a stacking interaction between a His and a Trp. MRD adopts a structural fold similar to bleomycin resistance protein, glyoxalase I, and extradiol dioxygenases; and it has binding sites at an identical location to binding sites in these evolutionarily related enzymes.
Probab=42.32 E-value=25 Score=23.83 Aligned_cols=24 Identities=13% Similarity=0.317 Sum_probs=17.1
Q ss_pred EEEEeecCCcchHhHHhhCCCeEee
Q 026519 182 IALHCDFNNLGATKLYKGQGFKCVK 206 (237)
Q Consensus 182 i~l~~~~~N~~a~~fy~k~GF~~~~ 206 (237)
+.+.| .+-.+|++||+++||+...
T Consensus 4 i~l~V-~D~~~a~~FY~~LGf~~~~ 27 (122)
T cd07235 4 VGIVV-ADMAKSLDFYRRLGFDFPE 27 (122)
T ss_pred EEEEe-ccHHHHHHHHHHhCceecC
Confidence 44444 3345899999999998754
No 146
>PF12953 DUF3842: Domain of unknown function (DUF3842); InterPro: IPR024208 This family of proteins has no known function.
Probab=42.02 E-value=31 Score=24.44 Aligned_cols=51 Identities=20% Similarity=0.093 Sum_probs=37.1
Q ss_pred ccccChHHHHHHHHHHHHHHcCCcEEEEEeecCCcchHhHHhhCCCeEeecCCCC
Q 026519 157 FRRKGIAKRLIAKAEAQARGWGCRSIALHCDFNNLGATKLYKGQGFKCVKVPEGA 211 (237)
Q Consensus 157 ~rg~Gig~~Ll~~~~~~~~~~g~~~i~l~~~~~N~~a~~fy~k~GF~~~~~~~~~ 211 (237)
-||-|||+.+++.+-+.+.+ .+.+...-+|..|-.-+.|.|=..-..-++.
T Consensus 7 GQGGGiG~~iv~~lr~~~~~----~~eI~AlGTNa~AT~~MlKaGA~~gATGENa 57 (131)
T PF12953_consen 7 GQGGGIGKQIVEKLRKELPE----EVEIIALGTNAIATSAMLKAGANEGATGENA 57 (131)
T ss_pred CCCChhHHHHHHHHHHhCCC----CcEEEEEehhHHHHHHHHHcCCCCcccccch
Confidence 48889999999988777654 2444555666788888999987766554443
No 147
>PRK04531 acetylglutamate kinase; Provisional
Probab=41.37 E-value=1.3e+02 Score=25.93 Aligned_cols=54 Identities=19% Similarity=0.276 Sum_probs=38.7
Q ss_pred eeEEEEEEecccccccChHHHHHHHHHHHHHHcCCcEEEEEeecCCcchHhHH-hh-CCCeE
Q 026519 145 IAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDFNNLGATKLY-KG-QGFKC 204 (237)
Q Consensus 145 ~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~g~~~i~l~~~~~N~~a~~fy-~k-~GF~~ 204 (237)
..++..++|.+..||.|++..+.+.+.+... .+.-.+..+|+. .+|| +| .|+..
T Consensus 310 ~~~Ldkf~v~~~~~~~~v~d~vf~~~~~~~~-----~L~Wrsr~~n~~-~~Wyf~~s~G~~~ 365 (398)
T PRK04531 310 GPYLDKFAVLDDARGEGLGRAVWNVMREETP-----QLFWRSRHNNTI-NKFYYAESDGCIK 365 (398)
T ss_pred ceEeEEEEEccchhhcChHHHHHHHHHhhCC-----ceEEEcCCCCCc-cceeeecccceEe
Confidence 4899999999999999999999998877653 445556666663 3443 33 35444
No 148
>PF00925 GTP_cyclohydro2: GTP cyclohydrolase II; InterPro: IPR000926 GTP cyclohydrolase II catalyses the first committed step in the biosynthesis of riboflavin. The enzyme converts GTP and water to formate, 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)- pyrimidine and pyrophosphate, and requires magnesium as a cofactor. It is sometimes found as a bifunctional enzyme with 3,4-dihydroxy-2-butanone 4-phosphate synthase (DHBP_synthase) IPR000422 from INTERPRO. ; GO: 0003935 GTP cyclohydrolase II activity, 0009231 riboflavin biosynthetic process; PDB: 2BZ0_B 2BZ1_A.
Probab=40.84 E-value=27 Score=26.01 Aligned_cols=46 Identities=26% Similarity=0.362 Sum_probs=24.5
Q ss_pred ccccccChHHHHHHHHHHHHHHcCCcEEEEEeecCCcchHhHHhhCCCeEeecCC
Q 026519 155 EKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDFNNLGATKLYKGQGFKCVKVPE 209 (237)
Q Consensus 155 p~~rg~Gig~~Ll~~~~~~~~~~g~~~i~l~~~~~N~~a~~fy~k~GF~~~~~~~ 209 (237)
+++|--|+|.++ ++.+|++.+.| .++|+.-+.-.+..|-++++..+
T Consensus 123 ~d~R~ygigaqI-------L~dLGV~~~rL--Ltnnp~k~~~L~g~gleV~~~vp 168 (169)
T PF00925_consen 123 EDLRDYGIGAQI-------LRDLGVKKMRL--LTNNPRKYVALEGFGLEVVERVP 168 (169)
T ss_dssp S----THHHHHH-------HHHTT--SEEE--E-S-HHHHHHHHHTT--EEEEE-
T ss_pred cccccHHHHHHH-------HHHcCCCEEEE--CCCChhHHHHHhcCCCEEEEEec
Confidence 344455555444 44568999877 44567788889999999888643
No 149
>PF04816 DUF633: Family of unknown function (DUF633) ; InterPro: IPR006901 This is a family of uncharacterised bacterial proteins.; GO: 0016429 tRNA (adenine-N1-)-methyltransferase activity; PDB: 3LEC_A 3KU1_G 3KR9_A 3GNL_B.
Probab=40.15 E-value=33 Score=26.52 Aligned_cols=48 Identities=13% Similarity=0.207 Sum_probs=33.4
Q ss_pred ChHHHHHHHHHHHHHHc--CCcEEEEEeecCCcchHhHHhhCCCeEeecC
Q 026519 161 GIAKRLIAKAEAQARGW--GCRSIALHCDFNNLGATKLYKGQGFKCVKVP 208 (237)
Q Consensus 161 Gig~~Ll~~~~~~~~~~--g~~~i~l~~~~~N~~a~~fy~k~GF~~~~~~ 208 (237)
|+|..++..+++..... ....+.|-.......-+++...+||..+.+.
T Consensus 74 GMGG~lI~~ILe~~~~~~~~~~~lILqP~~~~~~LR~~L~~~gf~I~~E~ 123 (205)
T PF04816_consen 74 GMGGELIIEILEAGPEKLSSAKRLILQPNTHAYELRRWLYENGFEIIDED 123 (205)
T ss_dssp EE-HHHHHHHHHHTGGGGTT--EEEEEESS-HHHHHHHHHHTTEEEEEEE
T ss_pred cCCHHHHHHHHHhhHHHhccCCeEEEeCCCChHHHHHHHHHCCCEEEEeE
Confidence 89999999999988653 4455666555544456788888999999853
No 150
>PRK09607 rps11p 30S ribosomal protein S11P; Reviewed
Probab=39.49 E-value=1.4e+02 Score=21.32 Aligned_cols=54 Identities=15% Similarity=0.217 Sum_probs=40.6
Q ss_pred HHHHHHHHHHHHHHcCCcEEEEEeec-----------CCcchHhHHhhCCCeEeecCCCCCCCCC
Q 026519 163 AKRLIAKAEAQARGWGCRSIALHCDF-----------NNLGATKLYKGQGFKCVKVPEGANWPQP 216 (237)
Q Consensus 163 g~~Ll~~~~~~~~~~g~~~i~l~~~~-----------~N~~a~~fy~k~GF~~~~~~~~~~~~~~ 216 (237)
+....+.+.+.+.++|++.+.+.+.- ..+.|++-..+.|+++....+..+.+..
T Consensus 55 Aq~aae~~~~~~~~~Gi~~v~v~vkG~Ggn~~~~~G~Gr~~airal~~~glkI~~I~DvTpiPhN 119 (132)
T PRK09607 55 AMQAAEKAAEDAKEKGITGVHIKVRAPGGNGQKSPGPGAQAAIRALARAGLRIGRIEDVTPIPHD 119 (132)
T ss_pred HHHHHHHHHHHHHHcCCcEEEEEEEecCCCCCcCCCCcHHHHHHHHHHCCCEEEEEEEcCCCCCC
Confidence 34566778888888999998887754 4456899999999998887666555443
No 151
>cd09012 Glo_EDI_BRP_like_24 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.
Probab=39.10 E-value=21 Score=24.44 Aligned_cols=18 Identities=22% Similarity=0.276 Sum_probs=14.8
Q ss_pred CcchHhHHhhCCCeEeec
Q 026519 190 NLGATKLYKGQGFKCVKV 207 (237)
Q Consensus 190 N~~a~~fy~k~GF~~~~~ 207 (237)
-++|+.||+.+||+....
T Consensus 11 l~~s~~FY~~lGf~~~~~ 28 (124)
T cd09012 11 LEKSTAFYTALGFEFNPQ 28 (124)
T ss_pred HHHHHHHHHHCCCEEccc
Confidence 357999999999997753
No 152
>cd08353 Glo_EDI_BRP_like_7 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.
Probab=38.96 E-value=26 Score=24.59 Aligned_cols=28 Identities=7% Similarity=0.097 Sum_probs=20.0
Q ss_pred CcEEEEEeecCCcchHhHHhhCCCeEeec
Q 026519 179 CRSIALHCDFNNLGATKLYKGQGFKCVKV 207 (237)
Q Consensus 179 ~~~i~l~~~~~N~~a~~fy~k~GF~~~~~ 207 (237)
+..+.+.|. +-+++..||+++||+....
T Consensus 4 i~Hi~i~v~-Dl~~s~~FY~~LG~~~~~~ 31 (142)
T cd08353 4 MDNVGIVVR-DLEAAIAFFLELGLELEGR 31 (142)
T ss_pred eeeEEEEeC-CHHHHHHHHHHcCCEEccc
Confidence 455555554 3457899999999987654
No 153
>TIGR02990 ectoine_eutA ectoine utilization protein EutA. Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti and Silicibacter pomeroyi. It is missing from two other species with the other ectoine transport and utilization genes: Pseudomonas putida and Agrobacterium tumefaciens.
Probab=38.52 E-value=42 Score=26.60 Aligned_cols=45 Identities=18% Similarity=0.254 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHHHcCCcEEEEEeec---CCcchHhHHhhCCCeEeecC
Q 026519 164 KRLIAKAEAQARGWGCRSIALHCDF---NNLGATKLYKGQGFKCVKVP 208 (237)
Q Consensus 164 ~~Ll~~~~~~~~~~g~~~i~l~~~~---~N~~a~~fy~k~GF~~~~~~ 208 (237)
..-...+++.+++.|+++|-+.+-. -|.....||++.||+.+...
T Consensus 105 tt~~~A~~~AL~alg~~RIalvTPY~~~v~~~~~~~l~~~G~eV~~~~ 152 (239)
T TIGR02990 105 VTPSSAAVDGLAALGVRRISLLTPYTPETSRPMAQYFAVRGFEIVNFT 152 (239)
T ss_pred eCHHHHHHHHHHHcCCCEEEEECCCcHHHHHHHHHHHHhCCcEEeeee
Confidence 3445667777888899998887533 36677999999999998753
No 154
>cd08356 Glo_EDI_BRP_like_17 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.
Probab=37.24 E-value=21 Score=24.17 Aligned_cols=20 Identities=15% Similarity=0.262 Sum_probs=16.3
Q ss_pred CcchHhHHhhCCCeEeecCC
Q 026519 190 NLGATKLYKGQGFKCVKVPE 209 (237)
Q Consensus 190 N~~a~~fy~k~GF~~~~~~~ 209 (237)
-.++++||+.+||+......
T Consensus 12 l~~s~~FY~~LGf~~~~~~~ 31 (113)
T cd08356 12 FAESKQFYQALGFELEWEND 31 (113)
T ss_pred HHHHHHHHHHhCCeeEecCC
Confidence 35789999999999987543
No 155
>COG0807 RibA GTP cyclohydrolase II [Coenzyme metabolism]
Probab=37.11 E-value=52 Score=25.17 Aligned_cols=52 Identities=19% Similarity=0.225 Sum_probs=38.5
Q ss_pred EEecccccccChHHHHHHHHHHHHHHcCCcEEEEEeecCCcchHhHHhhCCCeEeecCCCC
Q 026519 151 VAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDFNNLGATKLYKGQGFKCVKVPEGA 211 (237)
Q Consensus 151 l~V~p~~rg~Gig~~Ll~~~~~~~~~~g~~~i~l~~~~~N~~a~~fy~k~GF~~~~~~~~~ 211 (237)
+.-.+++|..|+|..+|+. .|++.+.|.++ |+.-+.-.+..|-+++.+.+..
T Consensus 120 lg~~~D~R~ygigAqIL~d-------LGI~~irLLtn--np~K~~~l~~~Gi~vverv~~~ 171 (193)
T COG0807 120 LGFPADERDYGIGAQILKD-------LGIKKIRLLTN--NPRKIYGLEGFGINVVERVPLI 171 (193)
T ss_pred hcCCchHHHHHHHHHHHHH-------cCCcEEEEecC--ChHHHHHHHhCCceEEEEeecC
Confidence 3445778888888887754 59999988654 6766777788888888876654
No 156
>cd08342 HPPD_N_like N-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HPPD) and hydroxymandelate Synthase (HmaS). HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of HPP to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two, instead of three, su
Probab=36.83 E-value=46 Score=23.30 Aligned_cols=28 Identities=14% Similarity=0.132 Sum_probs=20.2
Q ss_pred EEEEEeecCCcchHhHHhh-CCCeEeecCC
Q 026519 181 SIALHCDFNNLGATKLYKG-QGFKCVKVPE 209 (237)
Q Consensus 181 ~i~l~~~~~N~~a~~fy~k-~GF~~~~~~~ 209 (237)
.+.+.| .+-+++++||++ +||+......
T Consensus 3 Hi~i~V-~D~e~s~~FY~~vLGf~~~~~~~ 31 (136)
T cd08342 3 HVEFYV-GNAKQLASWFSTKLGFEPVAYHG 31 (136)
T ss_pred EEEEEe-CCHHHHHHHHHHhcCCeEEEecC
Confidence 445555 344688999999 9999887543
No 157
>COG2898 Uncharacterized conserved protein [Function unknown]
Probab=36.43 E-value=1.8e+02 Score=26.26 Aligned_cols=60 Identities=12% Similarity=0.020 Sum_probs=45.3
Q ss_pred CCceEEEEEeccccCccCCCCCccccccCCCCCeeEEEEEEecccccccChHHHHHHHHHHHHHHcCCcEEEEEeec
Q 026519 112 RGYVAGILTVDTVADFLPRKGPLRQRSSFHRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDF 188 (237)
Q Consensus 112 ~~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~g~~~i~l~~~~ 188 (237)
+|+|+|++.+.... ......++.+--+|+.-+ |+-..|+..++.++++.|+..+.+..-+
T Consensus 401 ~g~VvaFa~l~~~~----------------~~~~~SlDlMR~sp~ap~-g~mdfLf~~li~~aKe~G~~~fsLgmAp 460 (538)
T COG2898 401 EGEVVAFANLMPTG----------------GKEGYSLDLMRRSPDAPN-GTMDFLFSELILWAKEEGYQRFSLGMAP 460 (538)
T ss_pred CCCeEEEEeecccC----------------CcceeEEEeeecCCCCCc-hHHHHHHHHHHHHHHHcCCeEEecCCcc
Confidence 37799999886431 122356776777777654 9999999999999999999998876443
No 158
>PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A.
Probab=34.51 E-value=90 Score=21.46 Aligned_cols=42 Identities=10% Similarity=0.165 Sum_probs=31.1
Q ss_pred HHHHHHHHHHHHcCCcEEEEEeecCCcchHhHHhhCCCeEee
Q 026519 165 RLIAKAEAQARGWGCRSIALHCDFNNLGATKLYKGQGFKCVK 206 (237)
Q Consensus 165 ~Ll~~~~~~~~~~g~~~i~l~~~~~N~~a~~fy~k~GF~~~~ 206 (237)
.-+-.+++.+.+.|++.+.+.....++.+..+-++.|.+.++
T Consensus 66 ~~~~~~v~~~~~~g~~~v~~~~g~~~~~~~~~a~~~gi~vig 107 (116)
T PF13380_consen 66 DKVPEIVDEAAALGVKAVWLQPGAESEELIEAAREAGIRVIG 107 (116)
T ss_dssp HHHHHHHHHHHHHT-SEEEE-TTS--HHHHHHHHHTT-EEEE
T ss_pred HHHHHHHHHHHHcCCCEEEEEcchHHHHHHHHHHHcCCEEEe
Confidence 445667777777799999999888889999999999999987
No 159
>cd08350 BLMT_like BLMT, a bleomycin resistance protein encoded on the transposon Tn5, and similar proteins. BLMT is a bleomycin (Bm) resistance protein, encoded by the ble gene on the transposon Tn5. This protein confers a survival advantage to Escherichia coli host cells. Bm is a glycopeptide antibiotic produced naturally by actinomycetes. It is a potent anti-cancer drug, which acts as a strong DNA-cutting agent, thereby causing cell death. BLMT has strong binding affinity to Bm and it protects against this lethal compound through drug sequestering. BLMT has two identically-folded subdomains, with the same alpha/beta fold; these two halves have no sequence similarity. BLMT is a dimer with two Bm-binding pockets formed at the dimer interface.
Probab=32.90 E-value=33 Score=23.28 Aligned_cols=21 Identities=14% Similarity=0.140 Sum_probs=16.6
Q ss_pred CCcchHhHHhhCCCeEeecCC
Q 026519 189 NNLGATKLYKGQGFKCVKVPE 209 (237)
Q Consensus 189 ~N~~a~~fy~k~GF~~~~~~~ 209 (237)
+-+++++||+++||+.....+
T Consensus 12 Dl~~s~~FY~~lG~~~~~~~~ 32 (120)
T cd08350 12 DLDATEAFYARLGFSVGYRQA 32 (120)
T ss_pred CHHHHHHHHHHcCCEEEecCC
Confidence 335799999999999876554
No 160
>CHL00041 rps11 ribosomal protein S11
Probab=32.61 E-value=1.7e+02 Score=20.27 Aligned_cols=57 Identities=11% Similarity=0.029 Sum_probs=39.1
Q ss_pred cccccChHH-HHHHHHHHHHHHcCCcEEEEEeec---CCcchHhHHhhCCCeEeecCCCCC
Q 026519 156 KFRRKGIAK-RLIAKAEAQARGWGCRSIALHCDF---NNLGATKLYKGQGFKCVKVPEGAN 212 (237)
Q Consensus 156 ~~rg~Gig~-~Ll~~~~~~~~~~g~~~i~l~~~~---~N~~a~~fy~k~GF~~~~~~~~~~ 212 (237)
..++.=+|. .+.+.+.+.+.+.|++.+.+.+.- ..+.+++-.++.|++.....+..+
T Consensus 50 ~rK~T~~Aa~~~a~~~~~~~~~~gi~~v~I~ikG~G~Gr~~~ir~l~~~glkI~~I~D~Tp 110 (116)
T CHL00041 50 ARKGTPFAAQTAAENAIRTVIDQGMKRAEVMIKGPGLGRDTALRAIRRSGLKLSSIRDVTP 110 (116)
T ss_pred CccCCHHHHHHHHHHHHHHHHHcCCcEEEEEEECCCCcHHHHHHHHHHCCCEEEEEEEcCC
Confidence 334434444 555677888888899998888754 445678888889999877654443
No 161
>PRK09318 bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein; Provisional
Probab=31.81 E-value=79 Score=27.13 Aligned_cols=36 Identities=22% Similarity=0.215 Sum_probs=26.4
Q ss_pred HHHHcCCcEEEEEeecCCcchHhHHhhCCCeEeecCCC
Q 026519 173 QARGWGCRSIALHCDFNNLGATKLYKGQGFKCVKVPEG 210 (237)
Q Consensus 173 ~~~~~g~~~i~l~~~~~N~~a~~fy~k~GF~~~~~~~~ 210 (237)
.++..|++.+.|.+ +|+.-+.-.+..|.+.+++.+.
T Consensus 322 IL~dLGV~~irLLT--Nnp~K~~~L~~~GieV~~~vpl 357 (387)
T PRK09318 322 ILKALGIEKVRLLT--NNPRKTKALEKYGIEVVETVPL 357 (387)
T ss_pred HHHHcCCCEEEECC--CCHHHHHHHHhCCCEEEEEecc
Confidence 34556888887754 4676677788999999987653
No 162
>PF05580 Peptidase_S55: SpoIVB peptidase S55; InterPro: IPR008763 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to the MEROPS peptidase family S55 (SpoIVB peptidase family, clan PA(S)). The protein SpoIVB plays a key role in signalling in the final sigma-K checkpoint of Bacillus subtilis [, ].
Probab=30.74 E-value=61 Score=25.23 Aligned_cols=24 Identities=25% Similarity=0.286 Sum_probs=20.0
Q ss_pred ccccccCCcccccCCceEEEEEec
Q 026519 99 FKVGGLDGKFSLHRGYVAGILTVD 122 (237)
Q Consensus 99 ~~~~g~~~~~~~~~~~ivG~~~~~ 122 (237)
|.+.|+-|.....++++||.+...
T Consensus 176 GIvqGMSGSPI~qdGKLiGAVthv 199 (218)
T PF05580_consen 176 GIVQGMSGSPIIQDGKLIGAVTHV 199 (218)
T ss_pred CEEecccCCCEEECCEEEEEEEEE
Confidence 567788888889999999988863
No 163
>PRK10150 beta-D-glucuronidase; Provisional
Probab=29.94 E-value=2.6e+02 Score=25.53 Aligned_cols=69 Identities=14% Similarity=0.101 Sum_probs=50.2
Q ss_pred CCCeeEEEEEEecccc--cccChHHHHHHHHHHHHHHcCCcEEEEEeecCCcchHhHHhhCCCeEeecCCC
Q 026519 142 RTGIAYISNVAVREKF--RRKGIAKRLIAKAEAQARGWGCRSIALHCDFNNLGATKLYKGQGFKCVKVPEG 210 (237)
Q Consensus 142 ~~~~~~i~~l~V~p~~--rg~Gig~~Ll~~~~~~~~~~g~~~i~l~~~~~N~~a~~fy~k~GF~~~~~~~~ 210 (237)
++....+..+..+++. .|.++-...+..-++.+++.|+..|.+.-.+..+....+.-++|+-+..+.+.
T Consensus 288 NG~pv~lrG~~~h~~~~~~G~a~~~~~~~~d~~l~K~~G~N~vR~sh~p~~~~~~~~cD~~GllV~~E~p~ 358 (604)
T PRK10150 288 NGKPFYFKGFGKHEDADIRGKGLDEVLNVHDHNLMKWIGANSFRTSHYPYSEEMLDLADRHGIVVIDETPA 358 (604)
T ss_pred CCEEEEEEeeeccCCCCccCCcCCHHHHHHHHHHHHHCCCCEEEeccCCCCHHHHHHHHhcCcEEEEeccc
Confidence 3444666656665553 45566677777778899999999999976665566677777899999987754
No 164
>TIGR02860 spore_IV_B stage IV sporulation protein B. SpoIVB, the stage IV sporulation protein B of endospore-forming bacteria such as Bacillus subtilis, is a serine proteinase, expressed in the spore (rather than mother cell) compartment, that participates in a proteolytic activation cascade for Sigma-K. It appears to be universal among endospore-forming bacteria and occurs nowhere else.
Probab=29.81 E-value=88 Score=26.97 Aligned_cols=35 Identities=29% Similarity=0.351 Sum_probs=26.9
Q ss_pred ccccccCCcccccCCceEEEEEeccccCccCCCCCccccccCCCCCeeEEEEEEecccccccCh
Q 026519 99 FKVGGLDGKFSLHRGYVAGILTVDTVADFLPRKGPLRQRSSFHRTGIAYISNVAVREKFRRKGI 162 (237)
Q Consensus 99 ~~~~g~~~~~~~~~~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gi 162 (237)
|.+.|+-|.....+|++||.+.- +.|+..-||.||
T Consensus 356 GivqGMSGSPi~q~gkliGAvtH-----------------------------Vfvndpt~GYGi 390 (402)
T TIGR02860 356 GIVQGMSGSPIIQNGKVIGAVTH-----------------------------VFVNDPTSGYGV 390 (402)
T ss_pred CEEecccCCCEEECCEEEEEEEE-----------------------------EEecCCCcceee
Confidence 45667788888888888887664 678888888887
No 165
>PRK14831 undecaprenyl pyrophosphate synthase; Provisional
Probab=29.58 E-value=63 Score=25.82 Aligned_cols=34 Identities=6% Similarity=0.073 Sum_probs=30.1
Q ss_pred ccccccChHHHHHHHHHHHHHHcCCcEEEEEeec
Q 026519 155 EKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDF 188 (237)
Q Consensus 155 p~~rg~Gig~~Ll~~~~~~~~~~g~~~i~l~~~~ 188 (237)
+...|+-.|..-+..++++|.+.|++.+.+.+.+
T Consensus 41 ~~~~GH~~G~~~l~~i~~~c~~~GI~~vT~yaFS 74 (249)
T PRK14831 41 PRIMGHRRGVDALKDLLRCCKDWGIGALTAYAFS 74 (249)
T ss_pred chhhhHHHHHHHHHHHHHHHHHcCCCEEEEeecc
Confidence 4457888899999999999999999999998877
No 166
>COG2384 Predicted SAM-dependent methyltransferase [General function prediction only]
Probab=28.78 E-value=90 Score=24.49 Aligned_cols=48 Identities=10% Similarity=0.217 Sum_probs=34.7
Q ss_pred ChHHHHHHHHHHHHHHc--CCcEEEEEeecCCcchHhHHhhCCCeEeecC
Q 026519 161 GIAKRLIAKAEAQARGW--GCRSIALHCDFNNLGATKLYKGQGFKCVKVP 208 (237)
Q Consensus 161 Gig~~Ll~~~~~~~~~~--g~~~i~l~~~~~N~~a~~fy~k~GF~~~~~~ 208 (237)
|+|..++...++...+. +..++.|--...-..-+.|..+++|+...+.
T Consensus 93 GMGG~lI~~ILee~~~~l~~~~rlILQPn~~~~~LR~~L~~~~~~I~~E~ 142 (226)
T COG2384 93 GMGGTLIREILEEGKEKLKGVERLILQPNIHTYELREWLSANSYEIKAET 142 (226)
T ss_pred CCcHHHHHHHHHHhhhhhcCcceEEECCCCCHHHHHHHHHhCCceeeeee
Confidence 99999999999998875 5556555433333345677788999998753
No 167
>COG3010 NanE Putative N-acetylmannosamine-6-phosphate epimerase [Carbohydrate transport and metabolism]
Probab=28.33 E-value=96 Score=24.11 Aligned_cols=72 Identities=10% Similarity=0.039 Sum_probs=45.8
Q ss_pred EEecccccccChHHHHHHHHHHHHHHcCCcEEEEEeecCCcchHhHHhhCCCeEeecCCCCCCCCCCCCCCceeEee
Q 026519 151 VAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDFNNLGATKLYKGQGFKCVKVPEGANWPQPKNSPDVKFKFM 227 (237)
Q Consensus 151 l~V~p~~rg~Gig~~Ll~~~~~~~~~~g~~~i~l~~~~~N~~a~~fy~k~GF~~~~~~~~~~~~~~~~~~~~~~~~m 227 (237)
|++|...|.+=-| -++.+++..+.. .+.+..+.++..=...-.++||..+|.....|........++++.++
T Consensus 102 IA~DaT~R~RP~~--~~~~~i~~~k~~---~~l~MAD~St~ee~l~a~~~G~D~IGTTLsGYT~~~~~~~~pDf~lv 173 (229)
T COG3010 102 IAFDATDRPRPDG--DLEELIARIKYP---GQLAMADCSTFEEGLNAHKLGFDIIGTTLSGYTGYTEKPTEPDFQLV 173 (229)
T ss_pred EEeecccCCCCcc--hHHHHHHHhhcC---CcEEEeccCCHHHHHHHHHcCCcEEecccccccCCCCCCCCCcHHHH
Confidence 7899999998877 677777774433 33444555544444556789999999766655443443444445444
No 168
>PRK00393 ribA GTP cyclohydrolase II; Reviewed
Probab=27.96 E-value=1.1e+02 Score=23.42 Aligned_cols=48 Identities=15% Similarity=0.205 Sum_probs=35.8
Q ss_pred ecccccccChHHHHHHHHHHHHHHcCCcEEEEEeecCCcchHhHHhhCCCeEeecCC
Q 026519 153 VREKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDFNNLGATKLYKGQGFKCVKVPE 209 (237)
Q Consensus 153 V~p~~rg~Gig~~Ll~~~~~~~~~~g~~~i~l~~~~~N~~a~~fy~k~GF~~~~~~~ 209 (237)
..+++|.-|+|.++|+ ..|++.+.|.++ |+.-+.-....|.++++..+
T Consensus 123 ~~~d~R~yGiGAQIL~-------dLGV~~mrLLtn--~~~k~~~L~g~GleV~~~~~ 170 (197)
T PRK00393 123 FAADERDYTLAADMLK-------ALGVKKVRLLTN--NPKKVEALTEAGINIVERVP 170 (197)
T ss_pred CCccceehhHHHHHHH-------HcCCCEEEECCC--CHHHHHHHHhCCCEEEEEec
Confidence 3456899999998875 459999887554 45456667789999987654
No 169
>cd07267 THT_Oxygenase_N N-terminal domain of 2,4,5-trihydroxytoluene (THT) oxygenase. This subfamily contains the N-terminal, non-catalytic, domain of THT oxygenase. THT oxygenase is an extradiol dioxygenase in the 2,4-dinitrotoluene (DNT) degradation pathway. It catalyzes the conversion of 2,4,5-trihydroxytoluene to an unstable ring fission product, 2,4-dihydroxy-5-methyl-6-oxo-2,4-hexadienoic acid. The native protein was determined to be a dimer by gel filtration. The enzyme belongs to the type I family of extradiol dioxygenases which contains two structurally homologous barrel-shaped domains at the N- and C-terminus of each monomer. The active-site metal is located in the C-terminal barrel. Fe(II) is required for its catalytic activity.
Probab=27.94 E-value=52 Score=21.99 Aligned_cols=28 Identities=7% Similarity=0.102 Sum_probs=19.1
Q ss_pred cEEEEEeecCCcchHhHHhhCCCeEeecC
Q 026519 180 RSIALHCDFNNLGATKLYKGQGFKCVKVP 208 (237)
Q Consensus 180 ~~i~l~~~~~N~~a~~fy~k~GF~~~~~~ 208 (237)
..+.+.|. +-.++.+||+.+||+...+.
T Consensus 5 ~hv~l~v~-Dl~~s~~FY~~lGl~~~~~~ 32 (113)
T cd07267 5 AHVRFEHP-DLDKAERFLTDFGLEVAART 32 (113)
T ss_pred EEEEEccC-CHHHHHHHHHHcCCEEEEec
Confidence 34445443 23578999999999987653
No 170
>TIGR00055 uppS undecaprenyl diphosphate synthase. Alternate name: undecaprenyl pyrophosphate synthetase. Activity has been demonstrated experimentally for members of this family from Micrococcus luteus, E. coli, Haemophilus influenzae, and Streptococcus pneumoniae.
Probab=27.50 E-value=85 Score=24.70 Aligned_cols=34 Identities=6% Similarity=-0.014 Sum_probs=30.2
Q ss_pred ccccccChHHHHHHHHHHHHHHcCCcEEEEEeec
Q 026519 155 EKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDF 188 (237)
Q Consensus 155 p~~rg~Gig~~Ll~~~~~~~~~~g~~~i~l~~~~ 188 (237)
|...|+--|..-+..++++|.+.|++.+.+.+.+
T Consensus 20 ~~~~GH~~G~~~~~~v~~~c~~~GI~~lT~yaFS 53 (226)
T TIGR00055 20 PRAYGHKAGVKSLRRILRWCANLGVECLTLYAFS 53 (226)
T ss_pred ChhHhHHHHHHHHHHHHHHHHHcCCCEEEEEEee
Confidence 5567888999999999999999999999988766
No 171
>TIGR03632 bact_S11 30S ribosomal protein S11. This model describes the bacterial 30S ribosomal protein S11. Cutoffs are set such that the model excludes archaeal and eukaryotic ribosomal proteins, but many chloroplast and mitochondrial equivalents of S11 are detected.
Probab=27.43 E-value=2.1e+02 Score=19.55 Aligned_cols=62 Identities=11% Similarity=0.214 Sum_probs=42.6
Q ss_pred ecccccccChHHH-HHHHHHHHHHHcCCcEEEEEeecC---CcchHhHHhhCCCeEeecCCCCCCC
Q 026519 153 VREKFRRKGIAKR-LIAKAEAQARGWGCRSIALHCDFN---NLGATKLYKGQGFKCVKVPEGANWP 214 (237)
Q Consensus 153 V~p~~rg~Gig~~-Ll~~~~~~~~~~g~~~i~l~~~~~---N~~a~~fy~k~GF~~~~~~~~~~~~ 214 (237)
..-..++.-++.. +.+.+.+.+.+.|+..+.+.+.-. .+.+++-..+.|++.....+..+.+
T Consensus 34 fkg~rk~t~~Aa~~~a~~~~~~~~~~gi~~v~v~~kG~G~gr~~~ir~l~~~glkI~~I~D~T~ip 99 (108)
T TIGR03632 34 FKGSKKSTPYAAQLAAEDAAKKAKEFGMKTVDVYVKGPGAGRESAIRALQAAGLEVTSIKDVTPIP 99 (108)
T ss_pred eCCCccCCHHHHHHHHHHHHHHHHHcCCcEEEEEEECCCCcHHHHHHHHHHCCCEEEEEEEcCCCC
Confidence 3344455566554 445667788888999988887554 4567888888999988766555443
No 172
>TIGR00505 ribA GTP cyclohydrolase II. Several members of the family are bifunctional, involving both ribA and ribB function. In these cases, ribA tends to be on the C-terminal end of the protein and ribB tends to be on the N-terminal. The function of archaeal members of the family has not been demonstrated and is assigned tentatively.
Probab=27.37 E-value=1.2e+02 Score=23.03 Aligned_cols=47 Identities=15% Similarity=0.239 Sum_probs=35.2
Q ss_pred cccccccChHHHHHHHHHHHHHHcCCcEEEEEeecCCcchHhHHhhCCCeEeecCC
Q 026519 154 REKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDFNNLGATKLYKGQGFKCVKVPE 209 (237)
Q Consensus 154 ~p~~rg~Gig~~Ll~~~~~~~~~~g~~~i~l~~~~~N~~a~~fy~k~GF~~~~~~~ 209 (237)
.+++|.-|+|.++|. ..|++.+.|.++ |+.-+.-.+..|.++++..+
T Consensus 121 ~~d~R~yGiGAQIL~-------dLGV~~~rLLtn--~~~k~~~L~g~gleVv~~~~ 167 (191)
T TIGR00505 121 PADERDFSLCADILE-------DLGVKKVRLLTN--NPKKIEILKKAGINIVERVP 167 (191)
T ss_pred cccceehhHHHHHHH-------HcCCCEEEECCC--CHHHHHHHHhCCCEEEEEec
Confidence 446899999998875 459999888555 45556677788989887664
No 173
>PRK14837 undecaprenyl pyrophosphate synthase; Provisional
Probab=27.15 E-value=88 Score=24.70 Aligned_cols=34 Identities=9% Similarity=-0.008 Sum_probs=30.1
Q ss_pred ccccccChHHHHHHHHHHHHHHcCCcEEEEEeec
Q 026519 155 EKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDF 188 (237)
Q Consensus 155 p~~rg~Gig~~Ll~~~~~~~~~~g~~~i~l~~~~ 188 (237)
|...|+--|..-+..++++|.+.|++.+.+.+.+
T Consensus 27 ~~~~GH~~G~~~~~~i~~~c~~~GI~~lT~YaFS 60 (230)
T PRK14837 27 SFFEGHKEGLKRAKEIVKHSLKLGIKYLSLYVFS 60 (230)
T ss_pred chhhhHHHHHHHHHHHHHHHHHcCCCEEEEEEee
Confidence 5567888899999999999999999999888766
No 174
>cd08358 Glo_EDI_BRP_like_21 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.
Probab=27.06 E-value=88 Score=22.02 Aligned_cols=26 Identities=19% Similarity=0.324 Sum_probs=17.7
Q ss_pred EEEEeecCCcchHhHHhh-CCCeEeecC
Q 026519 182 IALHCDFNNLGATKLYKG-QGFKCVKVP 208 (237)
Q Consensus 182 i~l~~~~~N~~a~~fy~k-~GF~~~~~~ 208 (237)
+.+.| .+-++|+.||++ +||+...+.
T Consensus 6 v~irV-~DlerSi~FY~~vLG~~~~~~~ 32 (127)
T cd08358 6 FVFKV-GNRNKTIKFYREVLGMKVLRHE 32 (127)
T ss_pred EEEEe-CCHHHHHHHHHHhcCCEEEeee
Confidence 34444 334689999965 899987654
No 175
>PRK09319 bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II/unknown domain fusion protein; Provisional
Probab=26.44 E-value=1e+02 Score=27.75 Aligned_cols=37 Identities=19% Similarity=0.139 Sum_probs=28.3
Q ss_pred HHHHHcCCcEEEEEeecCCcchHhHHhhCCCeEeecCCC
Q 026519 172 AQARGWGCRSIALHCDFNNLGATKLYKGQGFKCVKVPEG 210 (237)
Q Consensus 172 ~~~~~~g~~~i~l~~~~~N~~a~~fy~k~GF~~~~~~~~ 210 (237)
+.++..|++.+.|.+ +|+.=+.-.+.+|.+++++.+.
T Consensus 344 QIL~dLGI~kIrLLT--NNP~Ki~~L~~~GIeVv~rvpl 380 (555)
T PRK09319 344 QILNDLGIKRLRLIT--NNPRKIAGLGGYGLEVVDRVPL 380 (555)
T ss_pred HHHHHcCCCEEEECC--CCHHHHHHHHhCCCEEEEEecc
Confidence 445667888888855 5777788888999999988754
No 176
>cd08344 MhqB_like_N N-terminal domain of MhqB, a type I extradiol dioxygenase, and similar proteins. This subfamily contains the N-terminal, non-catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.
Probab=26.17 E-value=60 Score=21.60 Aligned_cols=28 Identities=18% Similarity=0.226 Sum_probs=19.6
Q ss_pred CcEEEEEeecCCcchHhHHhhCCCeEeec
Q 026519 179 CRSIALHCDFNNLGATKLYKGQGFKCVKV 207 (237)
Q Consensus 179 ~~~i~l~~~~~N~~a~~fy~k~GF~~~~~ 207 (237)
+..+.+.|. +-+++..||+.+||+....
T Consensus 3 i~hv~l~v~-d~~~s~~FY~~lG~~~~~~ 30 (112)
T cd08344 3 IDHFALEVP-DLEVARRFYEAFGLDVREE 30 (112)
T ss_pred eeEEEEecC-CHHHHHHHHHHhCCcEEee
Confidence 445555543 2357899999999998754
No 177
>PF04015 DUF362: Domain of unknown function (DUF362) ; InterPro: IPR007160 This domain is found in some iron-sulphur proteins.
Probab=26.02 E-value=1.3e+02 Score=22.97 Aligned_cols=48 Identities=8% Similarity=0.181 Sum_probs=36.4
Q ss_pred cChHHHHHHHHHHHHHHcCCcEEEEEeecCC--cchHhHHhhCCCeEeec
Q 026519 160 KGIAKRLIAKAEAQARGWGCRSIALHCDFNN--LGATKLYKGQGFKCVKV 207 (237)
Q Consensus 160 ~Gig~~Ll~~~~~~~~~~g~~~i~l~~~~~N--~~a~~fy~k~GF~~~~~ 207 (237)
.-.--.+++.+++.+++.|...+.+.-.+.. ......++..||.....
T Consensus 18 ~~T~P~vv~avv~~l~~~g~~~i~i~e~~~~~~~~~~~~~~~~G~~~~~~ 67 (206)
T PF04015_consen 18 ATTHPEVVRAVVEMLKEAGAKEIIIAESPGSGAADTREVFKRSGYEEIAE 67 (206)
T ss_pred ccCCHHHHHHHHHHHHHcCCCceEEEeCCCcchHhHHHHHHHcchhhHHH
Confidence 3344478999999999999987666655543 35788899999998865
No 178
>PF02836 Glyco_hydro_2_C: Glycosyl hydrolases family 2, TIM barrel domain; InterPro: IPR006103 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 2 GH2 from CAZY comprises enzymes with several known activities; beta-galactosidase (3.2.1.23 from EC); beta-mannosidase (3.2.1.25 from EC); beta-glucuronidase (3.2.1.31 from EC). These enzymes contain a conserved glutamic acid residue which has been shown [], in Escherichia coli lacZ (P00722 from SWISSPROT), to be the general acid/base catalyst in the active site of the enzyme. Beta-galactosidase from E. coli has a TIM-barrel-like core surrounded by four other largely beta domains [].; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3CMG_A 3FN9_C 1YQ2_A 3K4D_B 3LPG_B 3LPF_A 3K4A_B 3K46_B 3GM8_A 3DEC_A ....
Probab=25.73 E-value=1.9e+02 Score=23.50 Aligned_cols=67 Identities=9% Similarity=0.072 Sum_probs=41.5
Q ss_pred CeeEEEEEEeccccc--ccChHHHHHHHHHHHHHHcCCcEEEEEeecCCcchHhHHhhCCCeEeecCCC
Q 026519 144 GIAYISNVAVREKFR--RKGIAKRLIAKAEAQARGWGCRSIALHCDFNNLGATKLYKGQGFKCVKVPEG 210 (237)
Q Consensus 144 ~~~~i~~l~V~p~~r--g~Gig~~Ll~~~~~~~~~~g~~~i~l~~~~~N~~a~~fy~k~GF~~~~~~~~ 210 (237)
....|..+.-++.+- |.-+-...+..-+..+++.|+..|+++-.+..+.-+.+..++|+-...+...
T Consensus 13 k~~~l~Gv~~h~~~~~~g~a~~~~~~~~d~~l~k~~G~N~iR~~h~p~~~~~~~~cD~~GilV~~e~~~ 81 (298)
T PF02836_consen 13 KPIFLRGVNRHQDYPGLGRAMPDEAMERDLELMKEMGFNAIRTHHYPPSPRFYDLCDELGILVWQEIPL 81 (298)
T ss_dssp EEE-EEEEEE-S-BTTTBT---HHHHHHHHHHHHHTT-SEEEETTS--SHHHHHHHHHHT-EEEEE-S-
T ss_pred EEEEEEEEeeCcCcccccccCCHHHHHHHHHHHHhcCcceEEcccccCcHHHHHHHhhcCCEEEEeccc
Confidence 335566666666553 4445567777778889999999999977776667777788899999887655
No 179
>PF01255 Prenyltransf: Putative undecaprenyl diphosphate synthase; InterPro: IPR001441 Synonym(s): Di-trans-poly-cis-undecaprenyl-diphosphate synthase, Undecaprenyl pyrophosphate synthetase, Undecaprenyl pyrophosphate synthase, UPP synthetase Di-trans-poly-cis-decaprenylcistransferase (2.5.1.31 from EC) (UPP synthetase) generates undecaprenyl pyrophosphate (UPP) from isopentenyl pyrophosphate (IPP) []. This bacterial enzyme is also found in archaebacteria and in a number of uncharacterised proteins including some from yeasts. This entry also matches related enzymes that transfer alkyl groups, such as dehydrodolichyl diphosphate synthase.; GO: 0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups; PDB: 2D2R_B 2DTN_B 1F75_B 1X07_A 2E9D_A 1JP3_A 3QAS_A 1X09_A 1V7U_B 2E9A_A ....
Probab=25.16 E-value=86 Score=24.51 Aligned_cols=35 Identities=3% Similarity=-0.054 Sum_probs=28.9
Q ss_pred ccccccChHHHHHHHHHHHHHHcCCcEEEEEeecC
Q 026519 155 EKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDFN 189 (237)
Q Consensus 155 p~~rg~Gig~~Ll~~~~~~~~~~g~~~i~l~~~~~ 189 (237)
|...|+.-|..-+..++++|.+.|++.+.+.+.+.
T Consensus 15 ~~~~Gh~~G~~~l~~i~~~~~~~gI~~lTvYaFS~ 49 (223)
T PF01255_consen 15 PRSEGHRAGAEKLKEIVEWCLELGIKYLTVYAFST 49 (223)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHCT-SEEEEEEEET
T ss_pred CHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEEecc
Confidence 34577788899999999999999999999987763
No 180
>PF01751 Toprim: Toprim domain; InterPro: IPR006171 This is a conserved region from DNA primase. This corresponds to the Toprim (topoisomerase-primase) domain common to DnaG primases, topoisomerases, OLD family nucleases and RecR/M DNA repair proteins []. Both DnaG motifs IV and V are present in the alignment, the DxD (V) motif may be involved in Mg2+ binding and mutations to the conserved glutamate (IV) completely abolish DnaG type primase activity. DNA primase 2.7.7.6 from EC is a nucleotidyltransferase it synthesizes the oligoribonucleotide primers required for DNA replication on the lagging strand of the replication fork; it can also prime the leading stand and has been implicated in cell division []. This family also includes the atypical archaeal A subunit from type II DNA topoisomerases []. Type II DNA topoisomerases catalyse the relaxation of DNA supercoiling by causing transient double strand breaks.; PDB: 2ZJT_A 3IG0_A 3M4I_A 3NUH_B 1GKU_B 1GL9_C 3PWT_A 1CY4_A 1ECL_A 1CY7_A ....
Probab=24.07 E-value=73 Score=21.06 Aligned_cols=33 Identities=12% Similarity=0.047 Sum_probs=24.5
Q ss_pred EEecccccccChHHHHHHHHHHHHHHcCCcEEEE
Q 026519 151 VAVREKFRRKGIAKRLIAKAEAQARGWGCRSIAL 184 (237)
Q Consensus 151 l~V~p~~rg~Gig~~Ll~~~~~~~~~~g~~~i~l 184 (237)
+++||+.-|.-|+..+++.+....... ++++++
T Consensus 65 iatD~D~EGe~Ia~~i~~~~~~~~~~~-~~R~~~ 97 (100)
T PF01751_consen 65 IATDPDREGELIAWEIIELLGKNNPKL-IKRVWF 97 (100)
T ss_dssp EEC-SSHHHHHHHHHHHHHHHHHSHHH-TTEEEE
T ss_pred ecCCCChHHHHHHHHHHHHHhHhCCCc-CCEEEE
Confidence 688999999999988888887776654 556554
No 181
>PF08901 DUF1847: Protein of unknown function (DUF1847); InterPro: IPR014997 This group of proteins are functionally uncharacterised. They contain 4 N-terminal cysteines that may form a zinc-binding domain.
Probab=23.56 E-value=1e+02 Score=22.67 Aligned_cols=42 Identities=17% Similarity=0.269 Sum_probs=28.6
Q ss_pred HHHHHHHHHHcCCcEEEEEe--ecCCc--chHhHHhhCCCeEeecC
Q 026519 167 IAKAEAQARGWGCRSIALHC--DFNNL--GATKLYKGQGFKCVKVP 208 (237)
Q Consensus 167 l~~~~~~~~~~g~~~i~l~~--~~~N~--~a~~fy~k~GF~~~~~~ 208 (237)
++..++.+++.|++.+-+.. .-.++ ...++.+..||+.+...
T Consensus 43 veEiieFak~mgykkiGiAfCiGL~~EA~~~~~iL~~~gFev~sV~ 88 (157)
T PF08901_consen 43 VEEIIEFAKRMGYKKIGIAFCIGLRKEARILAKILEANGFEVYSVC 88 (157)
T ss_pred HHHHHHHHHHcCCCeeeehhhHhHHHHHHHHHHHHHHCCCEEEEEE
Confidence 57788889988998876542 11122 23567789999988754
No 182
>PRK14841 undecaprenyl pyrophosphate synthase; Provisional
Probab=23.53 E-value=1.1e+02 Score=24.15 Aligned_cols=34 Identities=3% Similarity=0.016 Sum_probs=29.9
Q ss_pred ccccccChHHHHHHHHHHHHHHcCCcEEEEEeec
Q 026519 155 EKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDF 188 (237)
Q Consensus 155 p~~rg~Gig~~Ll~~~~~~~~~~g~~~i~l~~~~ 188 (237)
|...|+--|..-+..++++|.+.|++.+.+.+.+
T Consensus 24 ~~~~GH~~G~~~l~~i~~~~~~lgIk~lTvYaFS 57 (233)
T PRK14841 24 PRIKGHQRGAEVLHNTVKWSLELGIKYLTAFSFS 57 (233)
T ss_pred chhhhHHHHHHHHHHHHHHHHHcCCCEEEEEeee
Confidence 5567888899999999999999999999888766
No 183
>COG3414 SgaB Phosphotransferase system, galactitol-specific IIB component [Carbohydrate transport and metabolism]
Probab=23.05 E-value=1.5e+02 Score=19.70 Aligned_cols=22 Identities=18% Similarity=0.320 Sum_probs=17.3
Q ss_pred ccChHHHHH--HHHHHHHHHcCCc
Q 026519 159 RKGIAKRLI--AKAEAQARGWGCR 180 (237)
Q Consensus 159 g~Gig~~Ll--~~~~~~~~~~g~~ 180 (237)
|.|+|+-++ ..+.+.++++|+.
T Consensus 9 G~GvgSS~~ik~kve~~l~~~gi~ 32 (93)
T COG3414 9 GNGVGSSTMIKMKVEEVLKELGID 32 (93)
T ss_pred CCCccHHHHHHHHHHHHHHHcCCC
Confidence 789998665 5578888899986
No 184
>cd00475 CIS_IPPS Cis (Z)-Isoprenyl Diphosphate Synthases (cis-IPPS); homodimers which catalyze the successive 1'-4 condensation of the isopentenyl diphosphate (IPP) molecule to trans,trans-farnesyl diphosphate (FPP) or to cis,trans-FPP to form long-chain polyprenyl diphosphates. A few can also catalyze the condensation of IPP to trans-geranyl diphosphate to form the short-chain cis,trans- FPP. In prokaryotes, the cis-IPPS, undecaprenyl diphosphate synthase (UPP synthase) catalyzes the formation of the carrier lipid UPP in bacterial cell wall peptidooglycan biosynthesis. Similarly, in eukaryotes, the cis-IPPS, dehydrodolichyl diphosphate (dedol-PP) synthase catalyzes the formation of the polyisoprenoid glycosyl carrier lipid dolichyl monophosphate. cis-IPPS are mechanistically and structurally distinct from trans-IPPS, lacking the DDXXD motifs, yet requiring Mg2+ for activity.
Probab=23.00 E-value=1.2e+02 Score=23.84 Aligned_cols=34 Identities=6% Similarity=0.039 Sum_probs=29.8
Q ss_pred ccccccChHHHHHHHHHHHHHHcCCcEEEEEeec
Q 026519 155 EKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDF 188 (237)
Q Consensus 155 p~~rg~Gig~~Ll~~~~~~~~~~g~~~i~l~~~~ 188 (237)
|...|+--|..-+..++++|.+.|++.+.+.+.+
T Consensus 21 ~~~~GH~~G~~~~~~i~~~~~~~gI~~lTvyaFS 54 (221)
T cd00475 21 DRIEGHKAGAEKLRDILRWCLELGVKEVTLYAFS 54 (221)
T ss_pred ChhHhHHHHHHHHHHHHHHHHHcCCCEEEEEeec
Confidence 5567888899999999999999999999888766
No 185
>cd08346 PcpA_N_like N-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins. The N-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.
Probab=22.95 E-value=96 Score=20.68 Aligned_cols=30 Identities=17% Similarity=0.285 Sum_probs=20.2
Q ss_pred CcEEEEEeecCCcchHhHHhh-CCCeEeecCC
Q 026519 179 CRSIALHCDFNNLGATKLYKG-QGFKCVKVPE 209 (237)
Q Consensus 179 ~~~i~l~~~~~N~~a~~fy~k-~GF~~~~~~~ 209 (237)
+..+.|.|. +-+++..||++ +||+......
T Consensus 2 i~hv~l~v~-d~~~a~~FY~~~lG~~~~~~~~ 32 (126)
T cd08346 2 LHHVTLITR-DAQETVDFYTDVLGLRLVKKTV 32 (126)
T ss_pred cccEEEEcC-ChhHhHHHHHHccCCEEeeeEe
Confidence 445555542 33578999987 7999876543
No 186
>TIGR03645 glyox_marine lactoylglutathione lyase family protein. Members of this protein family share homology with lactoylglutathione lyase (glyoxalase I) and are found mainly in marine members of the gammaproteobacteria, including CPS_0532 from Colwellia psychrerythraea 34H. This family excludes a well-separated, more narrowly distributed paralogous family, exemplified by CPS_3492 from C. psychrerythraea. The function is of this protein family is unknown.
Probab=22.82 E-value=79 Score=23.06 Aligned_cols=28 Identities=18% Similarity=0.254 Sum_probs=20.1
Q ss_pred CCcEEEEEeecCCcchHhHHhh-CCCeEee
Q 026519 178 GCRSIALHCDFNNLGATKLYKG-QGFKCVK 206 (237)
Q Consensus 178 g~~~i~l~~~~~N~~a~~fy~k-~GF~~~~ 206 (237)
++.++.+.|. +-++|+.||++ +||+.+.
T Consensus 4 ~i~Hv~i~V~-Dle~s~~FY~~~LG~~~~~ 32 (162)
T TIGR03645 4 TFSHIGISVP-DLDAAVKFYTEVLGWYLIM 32 (162)
T ss_pred eEEEEEEEeC-CHHHHHHHHHHhcCCEEEe
Confidence 4556666653 34589999987 8998764
No 187
>cd07253 Glo_EDI_BRP_like_2 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.
Probab=22.77 E-value=87 Score=20.83 Aligned_cols=31 Identities=16% Similarity=0.279 Sum_probs=21.9
Q ss_pred CCcEEEEEeecCCcchHhHHhh-CCCeEeecCC
Q 026519 178 GCRSIALHCDFNNLGATKLYKG-QGFKCVKVPE 209 (237)
Q Consensus 178 g~~~i~l~~~~~N~~a~~fy~k-~GF~~~~~~~ 209 (237)
++..+.+.|. +-+++..||++ +||+......
T Consensus 3 ~l~hi~l~v~-d~~~s~~Fy~~~lG~~~~~~~~ 34 (125)
T cd07253 3 RIDHVVLTVA-DIEATLDFYTRVLGMEVVRFGE 34 (125)
T ss_pred ccceEEEEec-CHHHHHHHHHHHhCceeecccc
Confidence 4556666653 44578999999 8999887544
No 188
>PRK10240 undecaprenyl pyrophosphate synthase; Provisional
Probab=22.72 E-value=1.1e+02 Score=24.20 Aligned_cols=34 Identities=12% Similarity=0.013 Sum_probs=29.7
Q ss_pred ccccccChHHHHHHHHHHHHHHcCCcEEEEEeec
Q 026519 155 EKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDF 188 (237)
Q Consensus 155 p~~rg~Gig~~Ll~~~~~~~~~~g~~~i~l~~~~ 188 (237)
+...|+--|..-+..++++|.+.|++.+.+.+.+
T Consensus 14 ~~~~GH~~G~~~l~~i~~~c~~~GI~~lT~yaFS 47 (229)
T PRK10240 14 IRAFGHKAGAKSVRRAVSFAANNGIEALTLYAFS 47 (229)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeee
Confidence 4566888899999999999999999999888776
No 189
>PRK14832 undecaprenyl pyrophosphate synthase; Provisional
Probab=22.67 E-value=1.1e+02 Score=24.55 Aligned_cols=34 Identities=9% Similarity=0.192 Sum_probs=29.9
Q ss_pred ccccccChHHHHHHHHHHHHHHcCCcEEEEEeec
Q 026519 155 EKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDF 188 (237)
Q Consensus 155 p~~rg~Gig~~Ll~~~~~~~~~~g~~~i~l~~~~ 188 (237)
|...|+--|..-+..++++|.+.|++.+.+.+.+
T Consensus 39 ~~~~GH~~G~~~l~~i~~~c~~~gI~~lTvyaFS 72 (253)
T PRK14832 39 PRIAGHRQGARTLKELLRCCKDWGIKALTAYAFS 72 (253)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEEee
Confidence 5567888899999999999999999999888766
No 190
>PRK08815 GTP cyclohydrolase; Provisional
Probab=22.34 E-value=1.4e+02 Score=25.53 Aligned_cols=36 Identities=17% Similarity=0.208 Sum_probs=26.0
Q ss_pred HHHHcCCcEEEEEeecCCcchHhHHhhCCCeEeecCCC
Q 026519 173 QARGWGCRSIALHCDFNNLGATKLYKGQGFKCVKVPEG 210 (237)
Q Consensus 173 ~~~~~g~~~i~l~~~~~N~~a~~fy~k~GF~~~~~~~~ 210 (237)
.++..|++.+.|.++ |+.-+.-.+.+|.+.+++.+.
T Consensus 307 IL~dLGV~kirLLTn--np~K~~~L~g~gieVv~~vp~ 342 (375)
T PRK08815 307 MLRGLGITRVRLLTN--NPTKAERLRAAGIEVEDRIRV 342 (375)
T ss_pred HHHHcCCCeEEECCC--CHHHHHHHHhCCCEEEEEecc
Confidence 345568888888554 565566778999999987653
No 191
>PRK03681 hypA hydrogenase nickel incorporation protein; Validated
Probab=22.16 E-value=1.5e+02 Score=20.37 Aligned_cols=24 Identities=21% Similarity=0.336 Sum_probs=19.6
Q ss_pred ccChHHHHHHHHHHHHHHcCCcEE
Q 026519 159 RKGIAKRLIAKAEAQARGWGCRSI 182 (237)
Q Consensus 159 g~Gig~~Ll~~~~~~~~~~g~~~i 182 (237)
-.+|+..+++.+.+.++++|++++
T Consensus 3 E~si~~~iv~~v~~~a~~~~~~~V 26 (114)
T PRK03681 3 EITLCQRALELIEQQAAKHGAKRV 26 (114)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCeE
Confidence 357899999999999999876643
No 192
>PF10566 Glyco_hydro_97: Glycoside hydrolase 97 ; InterPro: IPR019563 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This is the 97th family of glycosidases, in this case bacterial. The central part of the GH97 family protein sequences represents a typical and complete (beta/alpha)8-barrel or catalytic TIM-barrel type domain. The N- and C-terminal parts of the sequences, mainly consisting of beta-strands, most probably form two additional non-catalytic domains with as yet unknown functions. The non-catalytic domains of glycosidases from the alpha-galactosidase and alpha-glucosidase superfamilies are also predominantly composed of beta-strands, and at least some of these domains are involved in oligomerisation and carbohydrate binding. In all known glycosidases with the (beta-alpha)8-barrel fold, the amino acid residues at the active site are located on the C-termini of the beta-strands []. ; PDB: 2JKP_A 2JKE_A 2D73_B 2ZQ0_B 2JKA_A 3A24_A.
Probab=22.11 E-value=1.7e+02 Score=23.76 Aligned_cols=41 Identities=29% Similarity=0.174 Sum_probs=21.4
Q ss_pred HHHHHHHHHHHHcCCcEEEEEeecCC-----------cchHhHHhhCCCeEee
Q 026519 165 RLIAKAEAQARGWGCRSIALHCDFNN-----------LGATKLYKGQGFKCVK 206 (237)
Q Consensus 165 ~Ll~~~~~~~~~~g~~~i~l~~~~~N-----------~~a~~fy~k~GF~~~~ 206 (237)
.-|..++++++++|+. |.|.+.... +.+.+.|++.|-+=++
T Consensus 73 ~dl~elv~Ya~~KgVg-i~lw~~~~~~~~~~~~~~~~~~~f~~~~~~Gv~GvK 124 (273)
T PF10566_consen 73 FDLPELVDYAKEKGVG-IWLWYHSETGGNVANLEKQLDEAFKLYAKWGVKGVK 124 (273)
T ss_dssp --HHHHHHHHHHTT-E-EEEEEECCHTTBHHHHHCCHHHHHHHHHHCTEEEEE
T ss_pred cCHHHHHHHHHHcCCC-EEEEEeCCcchhhHhHHHHHHHHHHHHHHcCCCEEe
Confidence 5566666677666653 344444433 4456666666655444
No 193
>cd07242 Glo_EDI_BRP_like_6 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.
Probab=21.85 E-value=99 Score=20.92 Aligned_cols=30 Identities=23% Similarity=0.274 Sum_probs=21.1
Q ss_pred CCcEEEEEeecCCcchHhHHhhC----CCeEeecC
Q 026519 178 GCRSIALHCDFNNLGATKLYKGQ----GFKCVKVP 208 (237)
Q Consensus 178 g~~~i~l~~~~~N~~a~~fy~k~----GF~~~~~~ 208 (237)
|+..+.+.|. +-+++.+||++. ||+.....
T Consensus 1 ~i~Hv~i~v~-d~~~~~~Fy~~~l~~~G~~~~~~~ 34 (128)
T cd07242 1 GIHHVELTVR-DLERSRAFYDWLLGLLGFEEVKEW 34 (128)
T ss_pred CCceEEEEeC-CHHHHHHHHHHHHhhcCCEEEEee
Confidence 3456666663 345789999985 99988754
No 194
>PF03376 Adeno_E3B: Adenovirus E3B protein; InterPro: IPR005041 Adenoviruses are medium-sized, non-enveloped viruses containing double-stranded DNA. They can cause a variety of diseases including pneumonia, cystitis, conjunctivitis and diarrhoea, all of which can be fatal to patients who are immunocompromised []. These viruses have many mechanisms to evade the host immune response, including several proteins which are expressed as part of the early transcription unit 3 (E3) []. One of the regions of E3, known as the E3B region, encodes three proteins known as 10.4K, 14.5K and 14.7K. Two of these proteins, 10.4K and 14.5K, form the RID complex (receptor internalisation and degradation) which protects the infected cell from host-induced lysis by clearing the the TNF and Fas receptors from the cell surface []. Other receptors, such as the epidermal growth factor receptor, are also known to be cleared by RID []. This entry represents the E3B region 10.4K protein, also known as the RID alpha subunit.; GO: 0016020 membrane
Probab=21.70 E-value=41 Score=20.55 Aligned_cols=13 Identities=31% Similarity=0.514 Sum_probs=10.2
Q ss_pred cccccccChHHHH
Q 026519 154 REKFRRKGIAKRL 166 (237)
Q Consensus 154 ~p~~rg~Gig~~L 166 (237)
+|+||++.||+.|
T Consensus 53 hPqYrn~~iA~LL 65 (67)
T PF03376_consen 53 HPQYRNQQIAALL 65 (67)
T ss_pred CchhcCHHHHHHh
Confidence 5888888888765
No 195
>PRK14019 bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II-like protein; Provisional
Probab=21.67 E-value=1.2e+02 Score=25.77 Aligned_cols=36 Identities=14% Similarity=0.114 Sum_probs=26.7
Q ss_pred HHHHHHcCCcEEEEEeecCCcchHhHHhhCCCeEeecCC
Q 026519 171 EAQARGWGCRSIALHCDFNNLGATKLYKGQGFKCVKVPE 209 (237)
Q Consensus 171 ~~~~~~~g~~~i~l~~~~~N~~a~~fy~k~GF~~~~~~~ 209 (237)
.+.++.+|++.+.|.+ |+.-+.-.+..|.+++++.+
T Consensus 328 aqIL~~Lgv~~irLlT---np~K~~~L~~~Gi~V~~~~~ 363 (367)
T PRK14019 328 AQILRDLGVGKMRLLS---SPRKFPSMSGFGLEVTGYVP 363 (367)
T ss_pred HHHHHHcCCCeEEECC---CcHHHHhhhhCCcEEEEEec
Confidence 4556777999999866 45566667889999987654
No 196
>PRK14829 undecaprenyl pyrophosphate synthase; Provisional
Probab=21.49 E-value=1.1e+02 Score=24.31 Aligned_cols=34 Identities=12% Similarity=0.005 Sum_probs=29.8
Q ss_pred ccccccChHHHHHHHHHHHHHHcCCcEEEEEeec
Q 026519 155 EKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDF 188 (237)
Q Consensus 155 p~~rg~Gig~~Ll~~~~~~~~~~g~~~i~l~~~~ 188 (237)
+...|+--|..-+..++++|.+.|++.+.+.+.+
T Consensus 35 ~~~~GH~~G~~~l~~iv~~c~~~gI~~vTvYaFS 68 (243)
T PRK14829 35 KRTEGHKAGEPVLFDVVAGAIEAGVPYLSLYTFS 68 (243)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHcCCCEEEEeeec
Confidence 4567888899999999999999999999888774
No 197
>PRK05031 tRNA (uracil-5-)-methyltransferase; Validated
Probab=21.27 E-value=2.4e+02 Score=23.90 Aligned_cols=60 Identities=15% Similarity=0.179 Sum_probs=39.7
Q ss_pred EEEEecccccccChHHHHHHHHHHHHHHcCCcEEEEEeecCCcc-hHhHHhhCCCeEeecCCCCCCCCC
Q 026519 149 SNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDFNNLG-ATKLYKGQGFKCVKVPEGANWPQP 216 (237)
Q Consensus 149 ~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~g~~~i~l~~~~~N~~-a~~fy~k~GF~~~~~~~~~~~~~~ 216 (237)
+.+.+||.+ .|+...+++.+.+ . -.-+++.|++...+ -.....+ ||+......-.-|++.
T Consensus 290 D~v~lDPPR--~G~~~~~l~~l~~-~----~~ivyvSC~p~tlarDl~~L~~-gY~l~~v~~~DmFPqT 350 (362)
T PRK05031 290 STIFVDPPR--AGLDDETLKLVQA-Y----ERILYISCNPETLCENLETLSQ-THKVERFALFDQFPYT 350 (362)
T ss_pred CEEEECCCC--CCCcHHHHHHHHc-c----CCEEEEEeCHHHHHHHHHHHcC-CcEEEEEEEcccCCCC
Confidence 558899994 6888888888765 1 23688888884322 1444544 9998886655444433
No 198
>PRK14842 undecaprenyl pyrophosphate synthase; Provisional
Probab=21.18 E-value=1.3e+02 Score=23.91 Aligned_cols=34 Identities=12% Similarity=0.103 Sum_probs=29.9
Q ss_pred ccccccChHHHHHHHHHHHHHHcCCcEEEEEeec
Q 026519 155 EKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDF 188 (237)
Q Consensus 155 p~~rg~Gig~~Ll~~~~~~~~~~g~~~i~l~~~~ 188 (237)
|...|+--|..-+..++++|.+.|++.+.+.+.+
T Consensus 29 ~~~~GH~~G~~~l~~i~~~c~~lgI~~vTvYaFS 62 (241)
T PRK14842 29 KRSEGHREGANAIDRLMDASLEYGLKNISLYAFS 62 (241)
T ss_pred ChhHhHHHHHHHHHHHHHHHHHcCCCEEEEEEee
Confidence 5567888899999999999999999999888766
No 199
>cd08362 BphC5-RrK37_N_like N-terminal, non-catalytic, domain of BphC5 (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Rhodococcus rhodochrous K37, and similar proteins. 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). The enzyme contains a N-terminal and a C-terminal domain of similar structure fold, resulting from an ancient gene duplication. BphC belongs to the type I extradiol dioxygenase family, which requires a metal in the active site for its catalytic activity. Polychlorinated biphenyl degrading bacteria demonstrate multiplicity of BphCs. Bacterium Rhodococcus rhodochrous K37 has eight genes encoding BphC enzymes. This family includes the N-terminal domain of BphC5-RrK37. The crystal structure of the protein from Novosphingobium aromaticivorans has a Mn(II)in the active site, although most proteins of type I extradiol dioxyge
Probab=20.98 E-value=70 Score=21.34 Aligned_cols=32 Identities=22% Similarity=0.398 Sum_probs=22.1
Q ss_pred CCcEEEEEeecCCcchHhHHhh-CCCeEeecCCC
Q 026519 178 GCRSIALHCDFNNLGATKLYKG-QGFKCVKVPEG 210 (237)
Q Consensus 178 g~~~i~l~~~~~N~~a~~fy~k-~GF~~~~~~~~ 210 (237)
++..+.+.+. +-+++..||++ +||+.......
T Consensus 3 ~i~hv~l~v~-d~~~s~~FY~~~lG~~~~~~~~~ 35 (120)
T cd08362 3 ALRGVGLGVP-DLAAAAAFYREVWGLSVVAEDDG 35 (120)
T ss_pred eeeEEEEecC-CHHHHHHHHHhCcCcEEEEecCC
Confidence 4556666553 33578999998 79998765444
No 200
>PRK05309 30S ribosomal protein S11; Validated
Probab=20.93 E-value=3.1e+02 Score=19.37 Aligned_cols=62 Identities=11% Similarity=0.172 Sum_probs=42.1
Q ss_pred ccccccChHH-HHHHHHHHHHHHcCCcEEEEEeecC---CcchHhHHhhCCCeEeecCCCCCCCCC
Q 026519 155 EKFRRKGIAK-RLIAKAEAQARGWGCRSIALHCDFN---NLGATKLYKGQGFKCVKVPEGANWPQP 216 (237)
Q Consensus 155 p~~rg~Gig~-~Ll~~~~~~~~~~g~~~i~l~~~~~---N~~a~~fy~k~GF~~~~~~~~~~~~~~ 216 (237)
-..++.-+|. .+.+.+.+.+.+.|++.+.+.+.-. .+++++-..+.|+++....+..+.+.+
T Consensus 53 g~rK~T~~Aa~~aa~~~~~~~~~~gi~~v~v~ikG~G~Gr~~air~L~~~glkI~~I~D~TpiphN 118 (128)
T PRK05309 53 GSRKSTPYAAQVAAEDAAKKAKEHGMKTVEVFVKGPGSGRESAIRALQAAGLEVTSIKDVTPIPHN 118 (128)
T ss_pred CCccCCHHHHHHHHHHHHHHHHHcCCcEEEEEEECCCCcHHHHHHHHHHCCCEEEEEEEcCCCCCC
Confidence 3344444544 4556677778888999988887544 456788888899998876655554433
No 201
>PTZ00349 dehydrodolichyl diphosphate synthetase; Provisional
Probab=20.90 E-value=1.2e+02 Score=25.25 Aligned_cols=34 Identities=0% Similarity=-0.131 Sum_probs=30.0
Q ss_pred ccccccChHHHHHHHHHHHHHHcCCcEEEEEeec
Q 026519 155 EKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDF 188 (237)
Q Consensus 155 p~~rg~Gig~~Ll~~~~~~~~~~g~~~i~l~~~~ 188 (237)
|...|+-.|..-+..++++|.+.|++.+.+.+.+
T Consensus 40 ~~~~GH~~G~~~l~~il~~c~~lGIk~lTlYAFS 73 (322)
T PTZ00349 40 HSAIGHFMGSKALIQIIEICIKLKIKILSVFSFS 73 (322)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEEee
Confidence 5556888999999999999999999999888766
No 202
>COG3607 Predicted lactoylglutathione lyase [General function prediction only]
Probab=20.89 E-value=45 Score=23.53 Aligned_cols=17 Identities=24% Similarity=0.374 Sum_probs=14.1
Q ss_pred cchHhHHhhCCCeEeec
Q 026519 191 LGATKLYKGQGFKCVKV 207 (237)
Q Consensus 191 ~~a~~fy~k~GF~~~~~ 207 (237)
+++..||..+||+.-..
T Consensus 15 ~~S~~Fy~alGfk~Npq 31 (133)
T COG3607 15 EASKAFYTALGFKFNPQ 31 (133)
T ss_pred HHHHHHHHHhCcccCCC
Confidence 57899999999997653
No 203
>PLN02831 Bifunctional GTP cyclohydrolase II/ 3,4-dihydroxy-2-butanone-4-phosphate synthase
Probab=20.61 E-value=1.5e+02 Score=26.00 Aligned_cols=37 Identities=27% Similarity=0.243 Sum_probs=27.1
Q ss_pred HHHHHcCCcEEEEEeecCCcchHhHHhhCCCeEeecCCC
Q 026519 172 AQARGWGCRSIALHCDFNNLGATKLYKGQGFKCVKVPEG 210 (237)
Q Consensus 172 ~~~~~~g~~~i~l~~~~~N~~a~~fy~k~GF~~~~~~~~ 210 (237)
+.++..|++.+.|.+ +|+.=+.-.+.+|.+++++.+.
T Consensus 374 qIL~dLGI~~irLLT--NNp~K~~~L~~~GieVve~vp~ 410 (450)
T PLN02831 374 QILRDLGVRTMRLMT--NNPAKYTGLKGYGLAVVGRVPL 410 (450)
T ss_pred HHHHHcCCCEEEECC--CCHHHHHHHhhCCCEEEEEecc
Confidence 344566888888754 4676677788999999987654
No 204
>PF12162 STAT1_TAZ2bind: STAT1 TAZ2 binding domain; InterPro: IPR022752 This entry represents the C-terminal domain of STAT1, which selectively binds the TAZ2 domain of CRB (CREB-binding protein) []. This group of eukaryotic proteins is approximately 20 amino acids in length, and is found in association with PF02865 from PFAM, PF00017 from PFAM, PF01017 from PFAM, PF02864 from PFAM. By binding to CRB, it becomes a transcriptional activator and can initiate transcription of certain genes. ; GO: 0003700 sequence-specific DNA binding transcription factor activity; PDB: 2KA6_B.
Probab=20.57 E-value=48 Score=15.71 Aligned_cols=16 Identities=13% Similarity=0.011 Sum_probs=9.5
Q ss_pred eeeeccccCHHHHHHH
Q 026519 25 VVREARIEDIWEVAET 40 (237)
Q Consensus 25 ~iR~~~~~D~~~l~~l 40 (237)
.+-|+.++|++++.++
T Consensus 6 nmmPMSPddy~~l~~~ 21 (23)
T PF12162_consen 6 NMMPMSPDDYDELERM 21 (23)
T ss_dssp S---S-HHHHHHHHHH
T ss_pred cccCCCHHHHHHHHHh
Confidence 3568889999888765
No 205
>COG2231 Uncharacterized protein related to Endonuclease III [DNA replication, recombination, and repair]
Probab=20.24 E-value=79 Score=24.47 Aligned_cols=40 Identities=23% Similarity=0.061 Sum_probs=31.3
Q ss_pred cChHHHHHHHHHHHHHHcCCcEEEEEeecCCcchHhHHhhCCCeEee
Q 026519 160 KGIAKRLIAKAEAQARGWGCRSIALHCDFNNLGATKLYKGQGFKCVK 206 (237)
Q Consensus 160 ~Gig~~Ll~~~~~~~~~~g~~~i~l~~~~~N~~a~~fy~k~GF~~~~ 206 (237)
+|||..-.+.++-++-+... ..++ ..+.+++.|+|+...+
T Consensus 121 KGIG~ETaDsILlYa~~rp~----FVvD---~Yt~R~l~rlg~i~~k 160 (215)
T COG2231 121 KGIGKETADSILLYALDRPV----FVVD---KYTRRLLSRLGGIEEK 160 (215)
T ss_pred CCcchhhHHHHHHHHhcCcc----cchh---HHHHHHHHHhcccccc
Confidence 59999999999999976521 1222 4789999999998874
No 206
>PRK14839 undecaprenyl pyrophosphate synthase; Provisional
Probab=20.19 E-value=1.4e+02 Score=23.78 Aligned_cols=34 Identities=12% Similarity=0.089 Sum_probs=29.8
Q ss_pred ccccccChHHHHHHHHHHHHHHcCCcEEEEEeec
Q 026519 155 EKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDF 188 (237)
Q Consensus 155 p~~rg~Gig~~Ll~~~~~~~~~~g~~~i~l~~~~ 188 (237)
+...|+--|..-+..++++|.+.|++.+.+.+.+
T Consensus 30 ~~~~GH~~G~~~l~~i~~~c~~~GI~~lTvYaFS 63 (239)
T PRK14839 30 PRLAGHRAGVEAIRRVVEAAPDLGIGTLTLYAFS 63 (239)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEEec
Confidence 4567888899999999999999999999888766
No 207
>PRK14840 undecaprenyl pyrophosphate synthase; Provisional
Probab=20.10 E-value=1.4e+02 Score=23.97 Aligned_cols=34 Identities=9% Similarity=0.017 Sum_probs=29.8
Q ss_pred ccccccChHHHHHHHHHHHHHHcCCcEEEEEeec
Q 026519 155 EKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDF 188 (237)
Q Consensus 155 p~~rg~Gig~~Ll~~~~~~~~~~g~~~i~l~~~~ 188 (237)
|...|+--|..-+..++++|.+.|++.+.+.+.+
T Consensus 43 ~~~~GH~~G~~~l~~v~~~c~~~GIk~lTvYaFS 76 (250)
T PRK14840 43 RAISGHYYGAKSLPQIVDTALHLGIEVLTLFAFS 76 (250)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEEee
Confidence 5567888899999999999999999999888766
Done!