Query 026520
Match_columns 237
No_of_seqs 207 out of 1539
Neff 4.8
Searched_HMMs 46136
Date Fri Mar 29 09:06:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026520.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/026520hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0484 DnaJ DnaJ-class molecu 99.8 1.5E-19 3.3E-24 170.0 6.7 61 173-237 2-62 (371)
2 KOG0713 Molecular chaperone (D 99.7 4.8E-18 1E-22 157.5 6.1 61 173-237 14-74 (336)
3 PRK14288 chaperone protein Dna 99.6 1.2E-16 2.6E-21 149.9 6.0 59 175-237 3-61 (369)
4 smart00271 DnaJ DnaJ molecular 99.6 4.5E-16 9.8E-21 108.7 7.2 60 175-237 1-60 (60)
5 PRK14296 chaperone protein Dna 99.6 2.8E-16 6.1E-21 147.6 6.3 59 174-237 3-61 (372)
6 cd06257 DnaJ DnaJ domain or J- 99.6 1.5E-15 3.3E-20 104.1 6.7 55 176-234 1-55 (55)
7 PRK14279 chaperone protein Dna 99.6 7.8E-16 1.7E-20 145.5 6.8 59 175-237 9-67 (392)
8 PRK14286 chaperone protein Dna 99.6 7.4E-16 1.6E-20 144.7 6.4 59 175-237 4-62 (372)
9 PRK14282 chaperone protein Dna 99.6 2.3E-15 4.9E-20 141.1 6.9 61 174-237 3-63 (369)
10 PF00226 DnaJ: DnaJ domain; I 99.6 3.7E-15 8E-20 105.8 5.7 58 176-236 1-58 (64)
11 PRK14285 chaperone protein Dna 99.6 3.1E-15 6.7E-20 140.2 6.8 59 175-237 3-61 (365)
12 PRK14287 chaperone protein Dna 99.6 2.8E-15 6E-20 140.8 6.4 59 174-237 3-61 (371)
13 PTZ00037 DnaJ_C chaperone prot 99.6 3.1E-15 6.7E-20 143.0 6.6 56 174-237 27-82 (421)
14 PRK14297 chaperone protein Dna 99.6 3.4E-15 7.4E-20 140.4 6.8 59 175-237 4-62 (380)
15 PRK14277 chaperone protein Dna 99.6 3.2E-15 7E-20 140.9 6.5 59 175-237 5-63 (386)
16 PRK14294 chaperone protein Dna 99.6 3.8E-15 8.2E-20 139.4 6.5 60 174-237 3-62 (366)
17 PRK14295 chaperone protein Dna 99.6 3.7E-15 8.1E-20 140.8 6.5 59 175-237 9-67 (389)
18 PRK14301 chaperone protein Dna 99.6 4.4E-15 9.6E-20 139.5 6.8 59 175-237 4-62 (373)
19 PRK14283 chaperone protein Dna 99.6 4.2E-15 9E-20 139.7 6.3 59 174-237 4-62 (378)
20 KOG0717 Molecular chaperone (D 99.6 4E-15 8.7E-20 142.8 6.1 60 174-236 7-66 (508)
21 PRK14276 chaperone protein Dna 99.6 4E-15 8.8E-20 140.0 6.1 59 174-237 3-61 (380)
22 PRK10767 chaperone protein Dna 99.5 6.4E-15 1.4E-19 137.9 6.8 60 174-237 3-62 (371)
23 PRK14299 chaperone protein Dna 99.5 5.3E-15 1.2E-19 134.6 5.9 58 174-236 3-60 (291)
24 PRK14280 chaperone protein Dna 99.5 6.5E-15 1.4E-19 138.4 6.2 59 174-237 3-61 (376)
25 PRK14278 chaperone protein Dna 99.5 7.3E-15 1.6E-19 138.3 6.3 58 175-237 3-60 (378)
26 PRK14281 chaperone protein Dna 99.5 9.6E-15 2.1E-19 138.3 6.4 59 175-237 3-61 (397)
27 PRK14298 chaperone protein Dna 99.5 9.6E-15 2.1E-19 137.5 6.0 58 175-237 5-62 (377)
28 PRK14291 chaperone protein Dna 99.5 1.1E-14 2.5E-19 137.0 5.8 58 175-237 3-60 (382)
29 KOG0691 Molecular chaperone (D 99.5 1.8E-14 3.8E-19 132.6 5.6 59 174-236 4-62 (296)
30 PRK14290 chaperone protein Dna 99.5 2.5E-14 5.4E-19 133.9 6.6 60 175-237 3-62 (365)
31 PRK14289 chaperone protein Dna 99.5 2.6E-14 5.6E-19 134.6 6.6 60 174-237 4-63 (386)
32 PRK10266 curved DNA-binding pr 99.5 2.6E-14 5.6E-19 130.9 5.9 59 174-237 3-61 (306)
33 KOG0716 Molecular chaperone (D 99.5 3.2E-14 7E-19 129.1 5.5 60 174-237 30-89 (279)
34 PRK14300 chaperone protein Dna 99.5 6.3E-14 1.4E-18 131.6 5.7 58 175-237 3-60 (372)
35 KOG0715 Molecular chaperone (D 99.5 8E-14 1.7E-18 127.6 5.9 59 174-237 42-100 (288)
36 PRK14293 chaperone protein Dna 99.4 1.1E-13 2.4E-18 130.0 5.9 58 175-237 3-60 (374)
37 KOG0718 Molecular chaperone (D 99.4 9.6E-14 2.1E-18 133.7 5.6 62 174-237 8-70 (546)
38 COG2214 CbpA DnaJ-class molecu 99.4 2.4E-13 5.1E-18 111.9 6.2 60 174-236 5-64 (237)
39 KOG0719 Molecular chaperone (D 99.4 2.1E-13 4.5E-18 122.1 4.9 63 172-236 11-73 (264)
40 KOG0721 Molecular chaperone (D 99.4 6.8E-13 1.5E-17 117.5 6.0 58 175-236 99-156 (230)
41 PTZ00341 Ring-infected erythro 99.4 7.3E-13 1.6E-17 136.5 6.9 60 172-236 570-629 (1136)
42 PRK05014 hscB co-chaperone Hsc 99.4 1.4E-12 3E-17 111.3 7.0 61 176-236 2-65 (171)
43 PRK00294 hscB co-chaperone Hsc 99.3 2.7E-12 5.8E-17 110.0 7.5 65 173-237 2-69 (173)
44 PHA03102 Small T antigen; Revi 99.3 8.7E-13 1.9E-17 111.3 4.3 57 174-236 4-60 (153)
45 PRK01356 hscB co-chaperone Hsc 99.3 2.4E-12 5.3E-17 109.4 6.0 62 175-236 2-64 (166)
46 PRK09430 djlA Dna-J like membr 99.3 2.2E-12 4.8E-17 116.7 6.1 62 172-235 197-263 (267)
47 PRK03578 hscB co-chaperone Hsc 99.3 6.9E-12 1.5E-16 107.6 7.4 62 175-236 6-70 (176)
48 PTZ00100 DnaJ chaperone protei 99.3 5.9E-12 1.3E-16 102.0 5.1 54 172-233 62-115 (116)
49 KOG0624 dsRNA-activated protei 99.2 1.6E-11 3.4E-16 116.1 4.3 66 170-237 389-455 (504)
50 KOG0714 Molecular chaperone (D 99.1 3.9E-11 8.4E-16 103.7 3.8 60 175-237 3-62 (306)
51 KOG0720 Molecular chaperone (D 99.1 1E-10 2.2E-15 112.7 4.5 65 168-237 228-292 (490)
52 PRK01773 hscB co-chaperone Hsc 99.0 9E-10 1.9E-14 94.5 6.6 62 175-236 2-66 (173)
53 PHA02624 large T antigen; Prov 99.0 2.9E-10 6.4E-15 113.4 4.0 58 173-236 9-66 (647)
54 KOG0550 Molecular chaperone (D 99.0 3.8E-10 8.3E-15 108.2 3.8 61 173-236 371-431 (486)
55 KOG0722 Molecular chaperone (D 98.9 4.3E-10 9.3E-15 102.3 2.7 61 171-236 29-89 (329)
56 COG5407 SEC63 Preprotein trans 98.9 1.2E-09 2.5E-14 105.8 4.0 59 176-236 99-160 (610)
57 KOG0712 Molecular chaperone (D 98.7 9.4E-09 2E-13 96.4 4.2 38 175-214 4-41 (337)
58 KOG1150 Predicted molecular ch 98.6 2.7E-08 5.9E-13 88.0 4.6 59 175-236 53-111 (250)
59 PRK14284 chaperone protein Dna 98.6 3.6E-08 7.8E-13 93.5 5.7 36 176-213 2-37 (391)
60 TIGR02349 DnaJ_bact chaperone 98.6 8.6E-08 1.9E-12 89.4 6.4 35 176-212 1-35 (354)
61 PRK14292 chaperone protein Dna 98.6 9.8E-08 2.1E-12 89.7 6.3 36 175-212 2-37 (371)
62 COG5269 ZUO1 Ribosome-associat 98.3 3.3E-07 7.1E-12 84.5 2.9 66 171-236 39-105 (379)
63 KOG1789 Endocytosis protein RM 98.2 1.4E-06 3.1E-11 91.4 5.0 61 169-234 1275-1337(2235)
64 TIGR03835 termin_org_DnaJ term 98.1 4.1E-06 8.8E-11 85.8 6.5 36 175-212 2-37 (871)
65 KOG0723 Molecular chaperone (D 97.9 1.8E-05 3.9E-10 63.7 4.8 56 172-235 53-108 (112)
66 KOG0568 Molecular chaperone (D 97.8 3.6E-05 7.9E-10 70.0 5.2 55 175-234 47-102 (342)
67 COG1076 DjlA DnaJ-domain-conta 97.1 0.00028 6E-09 60.2 2.7 56 175-232 113-173 (174)
68 KOG0431 Auxilin-like protein a 96.9 0.0013 2.8E-08 64.3 5.0 51 183-233 394-449 (453)
69 KOG3192 Mitochondrial J-type c 96.8 0.0014 3E-08 56.3 3.6 65 173-237 6-73 (168)
70 COG1076 DjlA DnaJ-domain-conta 95.7 0.0053 1.1E-07 52.3 1.9 61 176-236 2-65 (174)
71 PF03656 Pam16: Pam16; InterP 91.5 0.23 5E-06 41.1 3.6 55 171-233 54-108 (127)
72 PF13446 RPT: A repeated domai 87.6 0.8 1.7E-05 32.5 3.5 29 173-203 3-31 (62)
73 PF14687 DUF4460: Domain of un 87.6 1.5 3.3E-05 35.4 5.5 47 189-235 6-54 (112)
74 TIGR00714 hscB Fe-S protein as 86.5 0.58 1.3E-05 39.5 2.7 23 215-237 32-54 (157)
75 COG2879 Uncharacterized small 40.8 46 0.001 24.8 3.7 28 197-228 27-54 (65)
76 PF07709 SRR: Seven Residue Re 38.4 19 0.0004 18.8 1.0 13 221-233 2-14 (14)
77 PF12434 Malate_DH: Malate deh 23.2 89 0.0019 19.6 2.2 17 190-206 9-25 (28)
No 1
>COG0484 DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]
Probab=99.78 E-value=1.5e-19 Score=169.98 Aligned_cols=61 Identities=34% Similarity=0.516 Sum_probs=57.4
Q ss_pred CccccccccCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHHHHHhcccCC
Q 026520 173 GSSSDRTILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSLCAALS 237 (237)
Q Consensus 173 ~~~d~Y~VLGL~~~a~~s~~eIKkAYRkLalk~HPDK~~~~~k~~AeekFq~I~eAYevLsDp~k 237 (237)
...|||+||||+++| +.+|||+|||+||++||||++++. ++|+++|++|++||+||+||++
T Consensus 2 ~~~dyYeiLGV~k~A--s~~EIKkAYRkLA~kyHPD~n~g~--~~AeeKFKEI~eAYEVLsD~eK 62 (371)
T COG0484 2 AKRDYYEILGVSKDA--SEEEIKKAYRKLAKKYHPDRNPGD--KEAEEKFKEINEAYEVLSDPEK 62 (371)
T ss_pred CccchhhhcCCCCCC--CHHHHHHHHHHHHHHhCCCCCCCC--HHHHHHHHHHHHHHHHhCCHHH
Confidence 357999999999999 999999999999999999999975 7999999999999999999974
No 2
>KOG0713 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.72 E-value=4.8e-18 Score=157.54 Aligned_cols=61 Identities=34% Similarity=0.509 Sum_probs=58.1
Q ss_pred CccccccccCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHHHHHhcccCC
Q 026520 173 GSSSDRTILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSLCAALS 237 (237)
Q Consensus 173 ~~~d~Y~VLGL~~~a~~s~~eIKkAYRkLalk~HPDK~~~~~k~~AeekFq~I~eAYevLsDp~k 237 (237)
..+|||+||||+.+| +..|||+|||+|||+||||||+++ +.|.++|+.|+.||+||+||.+
T Consensus 14 ~~rDfYelLgV~k~A--sd~eIKkAYRKLALk~HPDkNpdd--p~A~e~F~~in~AYEVLsDpek 74 (336)
T KOG0713|consen 14 AGRDFYELLGVPKNA--SDQEIKKAYRKLALKYHPDKNPDD--PNANEKFKEINAAYEVLSDPEK 74 (336)
T ss_pred cCCCHHHHhCCCCCC--CHHHHHHHHHHHHHHhCCCCCCCC--HHHHHHHHHHHHHHHHhcCHHH
Confidence 457999999999999 999999999999999999999998 8999999999999999999963
No 3
>PRK14288 chaperone protein DnaJ; Provisional
Probab=99.65 E-value=1.2e-16 Score=149.90 Aligned_cols=59 Identities=37% Similarity=0.528 Sum_probs=55.0
Q ss_pred cccccccCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHHHHHhcccCC
Q 026520 175 SSDRTILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSLCAALS 237 (237)
Q Consensus 175 ~d~Y~VLGL~~~a~~s~~eIKkAYRkLalk~HPDK~~~~~k~~AeekFq~I~eAYevLsDp~k 237 (237)
.|||+||||+++| +.+|||+|||+||++||||+++++ +.|+++|++|++||+||+||.+
T Consensus 3 ~dyY~vLgv~~~A--s~~eIkkayrkla~k~HPD~~~~~--~~a~~~f~~i~~AYevLsd~~k 61 (369)
T PRK14288 3 LSYYEILEVEKHS--NQETIKKSYRKLALKYHPDRNAGD--KEAEEKFKLINEAYGVLSDEKK 61 (369)
T ss_pred CChHHHcCCCCCC--CHHHHHHHHHHHHHHHCCCCCCCc--cHHHHHHHHHHHHHHHhccHHH
Confidence 5999999999999 999999999999999999999864 4689999999999999999864
No 4
>smart00271 DnaJ DnaJ molecular chaperone homology domain.
Probab=99.65 E-value=4.5e-16 Score=108.68 Aligned_cols=60 Identities=43% Similarity=0.665 Sum_probs=55.5
Q ss_pred cccccccCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHHHHHhcccCC
Q 026520 175 SSDRTILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSLCAALS 237 (237)
Q Consensus 175 ~d~Y~VLGL~~~a~~s~~eIKkAYRkLalk~HPDK~~~~~k~~AeekFq~I~eAYevLsDp~k 237 (237)
.++|+||||++++ +.++|++||+++++.+|||++++. .+.+++.|+.|++||++|+||.+
T Consensus 1 ~~~y~vLgl~~~~--~~~~ik~ay~~l~~~~HPD~~~~~-~~~~~~~~~~l~~Ay~~L~~~~~ 60 (60)
T smart00271 1 TDYYEILGVPRDA--SLDEIKKAYRKLALKYHPDKNPGD-KEEAEEKFKEINEAYEVLSDPEK 60 (60)
T ss_pred CCHHHHcCCCCCC--CHHHHHHHHHHHHHHHCcCCCCCc-hHHHHHHHHHHHHHHHHHcCCCC
Confidence 3799999999998 999999999999999999999864 47899999999999999999864
No 5
>PRK14296 chaperone protein DnaJ; Provisional
Probab=99.63 E-value=2.8e-16 Score=147.64 Aligned_cols=59 Identities=20% Similarity=0.292 Sum_probs=54.8
Q ss_pred ccccccccCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHHHHHhcccCC
Q 026520 174 SSSDRTILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSLCAALS 237 (237)
Q Consensus 174 ~~d~Y~VLGL~~~a~~s~~eIKkAYRkLalk~HPDK~~~~~k~~AeekFq~I~eAYevLsDp~k 237 (237)
..|||+||||++++ +.+|||+|||+||++||||++++ +.|+++|++|++||+||+||.+
T Consensus 3 ~~dyY~~Lgv~~~a--~~~eik~ayrkla~~~HPD~n~~---~~a~~~F~~i~~AyevLsD~~K 61 (372)
T PRK14296 3 KKDYYEVLGVSKTA--SEQEIRQAYRKLAKQYHPDLNKS---PDAHDKMVEINEAADVLLDKDK 61 (372)
T ss_pred CCCHHHhcCCCCCC--CHHHHHHHHHHHHHHHCcCCCCC---chHHHHHHHHHHHHHHhcCHHH
Confidence 36999999999999 99999999999999999999975 3689999999999999999864
No 6
>cd06257 DnaJ DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.
Probab=99.61 E-value=1.5e-15 Score=104.07 Aligned_cols=55 Identities=44% Similarity=0.675 Sum_probs=51.9
Q ss_pred ccccccCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHHHHHhcc
Q 026520 176 SDRTILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSLCA 234 (237)
Q Consensus 176 d~Y~VLGL~~~a~~s~~eIKkAYRkLalk~HPDK~~~~~k~~AeekFq~I~eAYevLsD 234 (237)
+||+||||++.+ +.++|+++|++|++++|||++++. +.+++.|+.|++||++|+|
T Consensus 1 ~~y~vLgl~~~~--~~~~ik~~y~~l~~~~HPD~~~~~--~~~~~~~~~l~~Ay~~L~d 55 (55)
T cd06257 1 DYYDILGVPPDA--SDEEIKKAYRKLALKYHPDKNPDD--PEAEEKFKEINEAYEVLSD 55 (55)
T ss_pred ChHHHcCCCCCC--CHHHHHHHHHHHHHHHCcCCCCCc--HHHHHHHHHHHHHHHHhcC
Confidence 689999999999 999999999999999999999874 6789999999999999986
No 7
>PRK14279 chaperone protein DnaJ; Provisional
Probab=99.61 E-value=7.8e-16 Score=145.51 Aligned_cols=59 Identities=29% Similarity=0.421 Sum_probs=55.6
Q ss_pred cccccccCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHHHHHhcccCC
Q 026520 175 SSDRTILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSLCAALS 237 (237)
Q Consensus 175 ~d~Y~VLGL~~~a~~s~~eIKkAYRkLalk~HPDK~~~~~k~~AeekFq~I~eAYevLsDp~k 237 (237)
.|||+||||++++ +.+|||+|||+||++||||++++. +.|+++|++|++||+||+||.+
T Consensus 9 ~Dyy~~Lgv~~~a--~~~eik~ayr~la~~~HPD~~~~~--~~a~~~f~~i~~Ay~vLsD~~K 67 (392)
T PRK14279 9 KDFYKELGVSSDA--SAEEIKKAYRKLARELHPDANPGD--PAAEERFKAVSEAHDVLSDPAK 67 (392)
T ss_pred cCHHHhcCCCCCC--CHHHHHHHHHHHHHHHCcCCCCCC--hHHHHHHHHHHHHHHHhcchhh
Confidence 5999999999999 999999999999999999999865 5789999999999999999974
No 8
>PRK14286 chaperone protein DnaJ; Provisional
Probab=99.61 E-value=7.4e-16 Score=144.71 Aligned_cols=59 Identities=39% Similarity=0.588 Sum_probs=55.1
Q ss_pred cccccccCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHHHHHhcccCC
Q 026520 175 SSDRTILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSLCAALS 237 (237)
Q Consensus 175 ~d~Y~VLGL~~~a~~s~~eIKkAYRkLalk~HPDK~~~~~k~~AeekFq~I~eAYevLsDp~k 237 (237)
.|||+||||++++ +.+|||+|||+||++||||++++. +.|+++|++|++||+||+||.+
T Consensus 4 ~d~y~~Lgv~~~a--~~~eik~ayr~la~~~HPD~~~~~--~~a~~~f~~i~~Ay~vL~d~~k 62 (372)
T PRK14286 4 RSYYDILGVSKSA--NDEEIKSAYRKLAIKYHPDKNKGN--KESEEKFKEATEAYEILRDPKK 62 (372)
T ss_pred CCHHHhcCCCCCC--CHHHHHHHHHHHHHHHCcCCCCCc--hHHHHHHHHHHHHHHHhccHHH
Confidence 5999999999999 999999999999999999999864 5789999999999999999863
No 9
>PRK14282 chaperone protein DnaJ; Provisional
Probab=99.58 E-value=2.3e-15 Score=141.08 Aligned_cols=61 Identities=30% Similarity=0.540 Sum_probs=55.5
Q ss_pred ccccccccCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHHHHHhcccCC
Q 026520 174 SSSDRTILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSLCAALS 237 (237)
Q Consensus 174 ~~d~Y~VLGL~~~a~~s~~eIKkAYRkLalk~HPDK~~~~~k~~AeekFq~I~eAYevLsDp~k 237 (237)
..|||+||||++++ +.+|||+|||+||++||||+++.. .+.|+++|++|++||++|+||.+
T Consensus 3 ~~d~y~~lgv~~~a--~~~eik~ayr~la~~~HPD~~~~~-~~~a~~~f~~i~~Ay~vL~d~~k 63 (369)
T PRK14282 3 KKDYYEILGVSRNA--TQEEIKRAYKRLVKEWHPDRHPEN-RKEAEQKFKEIQEAYEVLSDPQK 63 (369)
T ss_pred CCChHHhcCCCCCC--CHHHHHHHHHHHHHHHCCCCCccc-hhHHHHHHHHHHHHHHHhcChhh
Confidence 36999999999999 999999999999999999999754 24689999999999999999864
No 10
>PF00226 DnaJ: DnaJ domain; InterPro: IPR001623 The prokaryotic heat shock protein DnaJ interacts with the chaperone hsp70-like DnaK protein []. Structurally, the DnaJ protein consists of an N-terminal conserved domain (called 'J' domain) of about 70 amino acids, a glycine-rich region ('G' domain') of about 30 residues, a central domain containing four repeats of a CXXCXGXG motif ('CRR' domain) and a C-terminal region of 120 to 170 residues. Such a structure is shown in the following schematic representation: +------------+-+-------+-----+-----------+--------------------------------+ | N-terminal | | Gly-R | | CXXCXGXG | C-terminal | +------------+-+-------+-----+-----------+--------------------------------+ It is thought that the 'J' domain of DnaJ mediates the interaction with the dnaK protein and consists of four helices, the second of which has a charged surface that includes at least one pair of basic residues that are essential for interaction with the ATPase domain of Hsp70. The J- and CRR-domains are found in many prokaryotic and eukaryotic proteins [], either together or separately. In yeast, J-domains have been classified into 3 groups; the class III proteins are functionally distinct and do not appear to act as molecular chaperones []. ; GO: 0031072 heat shock protein binding; PDB: 2GUZ_C 2L6L_A 1HDJ_A 2EJ7_A 1FPO_C 2CUG_A 2QSA_A 2OCH_A 3BVO_B 3APQ_A ....
Probab=99.57 E-value=3.7e-15 Score=105.83 Aligned_cols=58 Identities=40% Similarity=0.631 Sum_probs=54.1
Q ss_pred ccccccCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHHHHHhcccC
Q 026520 176 SDRTILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSLCAAL 236 (237)
Q Consensus 176 d~Y~VLGL~~~a~~s~~eIKkAYRkLalk~HPDK~~~~~k~~AeekFq~I~eAYevLsDp~ 236 (237)
++|+||||++++ +.++|+++|+++++++|||+++... ..+++.|..|++||++|+||.
T Consensus 1 ~~y~iLgl~~~~--~~~eik~~y~~l~~~~HPD~~~~~~-~~~~~~~~~i~~Ay~~L~~~~ 58 (64)
T PF00226_consen 1 NPYEILGLPPDA--SDEEIKKAYRRLSKQYHPDKNSGDE-AEAEEKFARINEAYEILSDPE 58 (64)
T ss_dssp HHHHHCTSTTTS--SHHHHHHHHHHHHHHTSTTTGTSTH-HHHHHHHHHHHHHHHHHHSHH
T ss_pred ChHHHCCCCCCC--CHHHHHHHHHhhhhccccccchhhh-hhhhHHHHHHHHHHHHhCCHH
Confidence 589999999999 9999999999999999999998863 579999999999999999984
No 11
>PRK14285 chaperone protein DnaJ; Provisional
Probab=99.57 E-value=3.1e-15 Score=140.22 Aligned_cols=59 Identities=37% Similarity=0.559 Sum_probs=55.2
Q ss_pred cccccccCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHHHHHhcccCC
Q 026520 175 SSDRTILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSLCAALS 237 (237)
Q Consensus 175 ~d~Y~VLGL~~~a~~s~~eIKkAYRkLalk~HPDK~~~~~k~~AeekFq~I~eAYevLsDp~k 237 (237)
.|||+||||++++ +.+|||+|||+||++||||++++. +.|+++|++|++||++|+||.+
T Consensus 3 ~d~y~iLgv~~~a--~~~eIk~ayr~la~~~HPD~~~~~--~~a~~~f~~i~~Ay~vL~d~~k 61 (365)
T PRK14285 3 RDYYEILGLSKGA--SKDEIKKAYRKIAIKYHPDKNKGN--KEAESIFKEATEAYEVLIDDNK 61 (365)
T ss_pred CCHHHhcCCCCCC--CHHHHHHHHHHHHHHHCCCCCCCC--HHHHHHHHHHHHHHHHHcCcch
Confidence 5999999999999 999999999999999999999865 5789999999999999999864
No 12
>PRK14287 chaperone protein DnaJ; Provisional
Probab=99.57 E-value=2.8e-15 Score=140.80 Aligned_cols=59 Identities=34% Similarity=0.527 Sum_probs=54.6
Q ss_pred ccccccccCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHHHHHhcccCC
Q 026520 174 SSSDRTILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSLCAALS 237 (237)
Q Consensus 174 ~~d~Y~VLGL~~~a~~s~~eIKkAYRkLalk~HPDK~~~~~k~~AeekFq~I~eAYevLsDp~k 237 (237)
..|||+||||++++ +.+|||+|||+||++||||+++. +.|+++|++|++||++|+||.+
T Consensus 3 ~~d~y~~Lgv~~~a--~~~eik~ayr~la~~~HpD~~~~---~~~~~~f~~i~~Ay~~L~d~~k 61 (371)
T PRK14287 3 KRDYYEVLGVDRNA--SVDEVKKAYRKLARKYHPDVNKA---PDAEDKFKEVKEAYDTLSDPQK 61 (371)
T ss_pred CCCHHHhcCCCCCC--CHHHHHHHHHHHHHHHCcCCCCC---hhHHHHHHHHHHHHHHhCcHhH
Confidence 35999999999999 99999999999999999999874 4689999999999999999964
No 13
>PTZ00037 DnaJ_C chaperone protein; Provisional
Probab=99.57 E-value=3.1e-15 Score=143.05 Aligned_cols=56 Identities=32% Similarity=0.427 Sum_probs=51.6
Q ss_pred ccccccccCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHHHHHhcccCC
Q 026520 174 SSSDRTILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSLCAALS 237 (237)
Q Consensus 174 ~~d~Y~VLGL~~~a~~s~~eIKkAYRkLalk~HPDK~~~~~k~~AeekFq~I~eAYevLsDp~k 237 (237)
..|||+||||+++| +.+|||+|||+||++||||++++ +++|++|++||+||+||.+
T Consensus 27 ~~d~Y~vLGV~~~A--s~~eIKkAYrkla~k~HPDk~~~------~e~F~~i~~AYevLsD~~k 82 (421)
T PTZ00037 27 NEKLYEVLNLSKDC--TTSEIKKAYRKLAIKHHPDKGGD------PEKFKEISRAYEVLSDPEK 82 (421)
T ss_pred chhHHHHcCCCCCC--CHHHHHHHHHHHHHHHCCCCCch------HHHHHHHHHHHHHhccHHH
Confidence 36999999999999 99999999999999999999863 4899999999999999864
No 14
>PRK14297 chaperone protein DnaJ; Provisional
Probab=99.57 E-value=3.4e-15 Score=140.36 Aligned_cols=59 Identities=41% Similarity=0.599 Sum_probs=55.2
Q ss_pred cccccccCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHHHHHhcccCC
Q 026520 175 SSDRTILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSLCAALS 237 (237)
Q Consensus 175 ~d~Y~VLGL~~~a~~s~~eIKkAYRkLalk~HPDK~~~~~k~~AeekFq~I~eAYevLsDp~k 237 (237)
.|||+||||++++ +.++||+|||+||++||||+++.. +.|+++|++|++||++|+||.+
T Consensus 4 ~d~y~~Lgv~~~a--~~~~ik~ayr~la~~~HPD~~~~~--~~a~~~f~~i~~Ay~vL~d~~~ 62 (380)
T PRK14297 4 KDYYEVLGLEKGA--SDDEIKKAFRKLAIKYHPDKNKGN--KEAEEKFKEINEAYQVLSDPQK 62 (380)
T ss_pred CChHHhhCCCCCC--CHHHHHHHHHHHHHHHCcCCCCCc--HHHHHHHHHHHHHHHHhcCHhh
Confidence 5999999999999 999999999999999999999865 5799999999999999999863
No 15
>PRK14277 chaperone protein DnaJ; Provisional
Probab=99.56 E-value=3.2e-15 Score=140.88 Aligned_cols=59 Identities=34% Similarity=0.490 Sum_probs=55.2
Q ss_pred cccccccCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHHHHHhcccCC
Q 026520 175 SSDRTILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSLCAALS 237 (237)
Q Consensus 175 ~d~Y~VLGL~~~a~~s~~eIKkAYRkLalk~HPDK~~~~~k~~AeekFq~I~eAYevLsDp~k 237 (237)
.|||+||||++++ +.+|||+|||+||++||||++++. +.|+++|++|++||+||+||.+
T Consensus 5 ~d~y~~Lgv~~~a--~~~eik~ayr~la~~~HPD~~~~~--~~a~~~f~~i~~Ay~vL~d~~k 63 (386)
T PRK14277 5 KDYYEILGVDRNA--TEEEIKKAYRRLAKKYHPDLNPGD--KEAEQKFKEINEAYEILSDPQK 63 (386)
T ss_pred CCHHHhcCCCCCC--CHHHHHHHHHHHHHHHCCCcCCCc--hHHHHHHHHHHHHHHHhCCHHH
Confidence 5999999999999 999999999999999999999864 5789999999999999999863
No 16
>PRK14294 chaperone protein DnaJ; Provisional
Probab=99.56 E-value=3.8e-15 Score=139.44 Aligned_cols=60 Identities=32% Similarity=0.532 Sum_probs=55.5
Q ss_pred ccccccccCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHHHHHhcccCC
Q 026520 174 SSSDRTILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSLCAALS 237 (237)
Q Consensus 174 ~~d~Y~VLGL~~~a~~s~~eIKkAYRkLalk~HPDK~~~~~k~~AeekFq~I~eAYevLsDp~k 237 (237)
..|||+||||++++ +.+|||+|||+||++||||++++. +.|+++|++|++||+||+||.+
T Consensus 3 ~~d~y~~lgv~~~a--~~~eik~ayr~la~~~HPD~~~~~--~~~~~~f~~~~~Ay~vL~d~~~ 62 (366)
T PRK14294 3 KRDYYEILGVTRDA--SEEEIKKSYRKLAMKYHPDRNPGD--KEAEELFKEAAEAYEVLSDPKK 62 (366)
T ss_pred CCChHHHhCCCCCC--CHHHHHHHHHHHHHHHCCCCCCCc--hHHHHHHHHHHHHHHHhccHHH
Confidence 46999999999999 999999999999999999999865 5689999999999999999863
No 17
>PRK14295 chaperone protein DnaJ; Provisional
Probab=99.56 E-value=3.7e-15 Score=140.77 Aligned_cols=59 Identities=34% Similarity=0.552 Sum_probs=55.1
Q ss_pred cccccccCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHHHHHhcccCC
Q 026520 175 SSDRTILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSLCAALS 237 (237)
Q Consensus 175 ~d~Y~VLGL~~~a~~s~~eIKkAYRkLalk~HPDK~~~~~k~~AeekFq~I~eAYevLsDp~k 237 (237)
.|||+||||++++ +.++||+|||+||++||||+++.. +.|+++|++|++||+||+||.+
T Consensus 9 ~d~y~~Lgv~~~a--~~~eik~ayr~la~~~HPD~~~~~--~~a~~~f~~i~~Ay~vL~d~~~ 67 (389)
T PRK14295 9 KDYYKVLGVPKDA--TEAEIKKAYRKLAREYHPDANKGD--AKAEERFKEISEAYDVLSDEKK 67 (389)
T ss_pred cCHHHhcCCCCCC--CHHHHHHHHHHHHHHHCCCcCCCc--hhHHHHHHHHHHHHHHHCchhh
Confidence 5999999999999 999999999999999999999864 5689999999999999999963
No 18
>PRK14301 chaperone protein DnaJ; Provisional
Probab=99.56 E-value=4.4e-15 Score=139.50 Aligned_cols=59 Identities=34% Similarity=0.536 Sum_probs=55.2
Q ss_pred cccccccCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHHHHHhcccCC
Q 026520 175 SSDRTILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSLCAALS 237 (237)
Q Consensus 175 ~d~Y~VLGL~~~a~~s~~eIKkAYRkLalk~HPDK~~~~~k~~AeekFq~I~eAYevLsDp~k 237 (237)
.|||+||||++++ +.++||+|||+||++||||++++. +.|+++|++|++||+||+||.+
T Consensus 4 ~~~y~~Lgv~~~a--~~~~ik~ayr~la~~~HPD~~~~~--~~a~~~f~~i~~Ay~vL~d~~k 62 (373)
T PRK14301 4 RDYYEVLGVSRDA--SEDEIKKAYRKLALQYHPDRNPDN--PEAEQKFKEAAEAYEVLRDAEK 62 (373)
T ss_pred CChHHhcCCCCCC--CHHHHHHHHHHHHHHhCCCcCCCC--hHHHHHHHHHHHHHHHhcchhh
Confidence 6999999999999 999999999999999999999865 5789999999999999999864
No 19
>PRK14283 chaperone protein DnaJ; Provisional
Probab=99.55 E-value=4.2e-15 Score=139.70 Aligned_cols=59 Identities=32% Similarity=0.433 Sum_probs=54.9
Q ss_pred ccccccccCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHHHHHhcccCC
Q 026520 174 SSSDRTILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSLCAALS 237 (237)
Q Consensus 174 ~~d~Y~VLGL~~~a~~s~~eIKkAYRkLalk~HPDK~~~~~k~~AeekFq~I~eAYevLsDp~k 237 (237)
..|||+||||++++ +.+|||+|||+||++||||++++ +.|+++|++|++||++|+||.+
T Consensus 4 ~~d~y~~Lgv~~~a--~~~eik~ayr~la~~~HPD~~~~---~~a~~~f~~i~~Ay~~Lsd~~k 62 (378)
T PRK14283 4 KRDYYEVLGVDRNA--DKKEIKKAYRKLARKYHPDVSEE---EGAEEKFKEISEAYAVLSDDEK 62 (378)
T ss_pred cCChHHhhCCCCCC--CHHHHHHHHHHHHHHHCcCCCCC---ccHHHHHHHHHHHHHHhchhHH
Confidence 46999999999999 99999999999999999999975 4699999999999999999863
No 20
>KOG0717 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.55 E-value=4e-15 Score=142.82 Aligned_cols=60 Identities=28% Similarity=0.474 Sum_probs=56.7
Q ss_pred ccccccccCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHHHHHhcccC
Q 026520 174 SSSDRTILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSLCAAL 236 (237)
Q Consensus 174 ~~d~Y~VLGL~~~a~~s~~eIKkAYRkLalk~HPDK~~~~~k~~AeekFq~I~eAYevLsDp~ 236 (237)
...||+||||..++ +..+||++||+|||+|||||+|+. .++|+++|+.|+.||+||+||.
T Consensus 7 ~~c~YE~L~v~~~a--~d~eik~~YRklALq~HPDknpd~-ieeat~~F~~i~aAYeVLSdp~ 66 (508)
T KOG0717|consen 7 KRCYYEVLGVERDA--DDDEIKKNYRKLALQYHPDKNPDR-IEEATQQFQLIQAAYEVLSDPQ 66 (508)
T ss_pred hhHHHHHhcccccC--CHHHHHHHHHHHHHhhCCCCCCcc-HHHHHHHHHHHHHHHHHhcChH
Confidence 46899999999999 999999999999999999998875 5889999999999999999995
No 21
>PRK14276 chaperone protein DnaJ; Provisional
Probab=99.55 E-value=4e-15 Score=139.97 Aligned_cols=59 Identities=31% Similarity=0.476 Sum_probs=54.6
Q ss_pred ccccccccCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHHHHHhcccCC
Q 026520 174 SSSDRTILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSLCAALS 237 (237)
Q Consensus 174 ~~d~Y~VLGL~~~a~~s~~eIKkAYRkLalk~HPDK~~~~~k~~AeekFq~I~eAYevLsDp~k 237 (237)
..|||+||||++++ +.+|||+|||+||++||||+++. +.|+++|++|++||++|+||.+
T Consensus 3 ~~d~y~~Lgv~~~a--~~~eik~ayr~la~~~HpD~~~~---~~a~~~f~~i~~Ay~vL~d~~k 61 (380)
T PRK14276 3 NTEYYDRLGVSKDA--SQDEIKKAYRKLSKKYHPDINKE---PGAEEKYKEVQEAYETLSDPQK 61 (380)
T ss_pred CCCHHHhhCCCCCC--CHHHHHHHHHHHHHHHCcCCCCC---cCHHHHHHHHHHHHHHhcCHhh
Confidence 36999999999999 99999999999999999999985 3689999999999999999864
No 22
>PRK10767 chaperone protein DnaJ; Provisional
Probab=99.55 E-value=6.4e-15 Score=137.89 Aligned_cols=60 Identities=35% Similarity=0.567 Sum_probs=55.3
Q ss_pred ccccccccCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHHHHHhcccCC
Q 026520 174 SSSDRTILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSLCAALS 237 (237)
Q Consensus 174 ~~d~Y~VLGL~~~a~~s~~eIKkAYRkLalk~HPDK~~~~~k~~AeekFq~I~eAYevLsDp~k 237 (237)
..|||+||||++++ +.++||+|||+||++||||++++. +.|+++|++|++||++|+||.+
T Consensus 3 ~~d~y~iLgv~~~a--s~~eik~ayr~la~~~HPD~~~~~--~~a~~~f~~i~~Ay~~L~d~~~ 62 (371)
T PRK10767 3 KRDYYEVLGVSRNA--SEDEIKKAYRKLAMKYHPDRNPGD--KEAEEKFKEIKEAYEVLSDPQK 62 (371)
T ss_pred CCChHHhcCCCCCC--CHHHHHHHHHHHHHHHCCCCCCCc--HHHHHHHHHHHHHHHHhcchhh
Confidence 36999999999999 999999999999999999999864 5689999999999999999863
No 23
>PRK14299 chaperone protein DnaJ; Provisional
Probab=99.54 E-value=5.3e-15 Score=134.62 Aligned_cols=58 Identities=38% Similarity=0.529 Sum_probs=54.1
Q ss_pred ccccccccCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHHHHHhcccC
Q 026520 174 SSSDRTILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSLCAAL 236 (237)
Q Consensus 174 ~~d~Y~VLGL~~~a~~s~~eIKkAYRkLalk~HPDK~~~~~k~~AeekFq~I~eAYevLsDp~ 236 (237)
..|||+||||++++ +.++||+|||+||++||||+++. +.++++|++|++||++|+||.
T Consensus 3 ~~d~y~vLgv~~~a--~~~eik~ayr~la~~~HPD~~~~---~~~~~~f~~i~~Ay~~L~d~~ 60 (291)
T PRK14299 3 YKDYYAILGVPKNA--SQDEIKKAFKKLARKYHPDVNKS---PGAEEKFKEINEAYTVLSDPE 60 (291)
T ss_pred CCCHHHHcCCCCCC--CHHHHHHHHHHHHHHHCcCCCCC---hhHHHHHHHHHHHHHHhcCHH
Confidence 36999999999999 99999999999999999999974 468999999999999999985
No 24
>PRK14280 chaperone protein DnaJ; Provisional
Probab=99.54 E-value=6.5e-15 Score=138.44 Aligned_cols=59 Identities=32% Similarity=0.479 Sum_probs=54.7
Q ss_pred ccccccccCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHHHHHhcccCC
Q 026520 174 SSSDRTILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSLCAALS 237 (237)
Q Consensus 174 ~~d~Y~VLGL~~~a~~s~~eIKkAYRkLalk~HPDK~~~~~k~~AeekFq~I~eAYevLsDp~k 237 (237)
..|||+||||++++ +.++||+|||+||++||||+++.. .|+++|++|++||++|+||.+
T Consensus 3 ~~~~y~iLgv~~~a--~~~eik~ayr~la~~~HpD~~~~~---~a~~~f~~i~~Ay~vL~d~~k 61 (376)
T PRK14280 3 KRDYYEVLGVSKSA--SKDEIKKAYRKLSKKYHPDINKEE---GADEKFKEISEAYEVLSDDQK 61 (376)
T ss_pred CCChHHhhCCCCCC--CHHHHHHHHHHHHHHHCcCCCCCc---cHHHHHHHHHHHHHHhccHhH
Confidence 36999999999999 999999999999999999999753 689999999999999999864
No 25
>PRK14278 chaperone protein DnaJ; Provisional
Probab=99.54 E-value=7.3e-15 Score=138.27 Aligned_cols=58 Identities=29% Similarity=0.374 Sum_probs=54.3
Q ss_pred cccccccCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHHHHHhcccCC
Q 026520 175 SSDRTILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSLCAALS 237 (237)
Q Consensus 175 ~d~Y~VLGL~~~a~~s~~eIKkAYRkLalk~HPDK~~~~~k~~AeekFq~I~eAYevLsDp~k 237 (237)
.|||+||||++++ +.++||+|||+||++||||++++ +.|+++|++|++||+||+||.+
T Consensus 3 ~d~y~iLgv~~~a--~~~eik~ayr~la~~~hpD~~~~---~~a~~~f~~i~~Ay~vL~d~~~ 60 (378)
T PRK14278 3 RDYYGLLGVSRNA--SDAEIKRAYRKLARELHPDVNPD---EEAQEKFKEISVAYEVLSDPEK 60 (378)
T ss_pred CCcceecCCCCCC--CHHHHHHHHHHHHHHHCCCCCCc---HHHHHHHHHHHHHHHHhchhhh
Confidence 5899999999999 99999999999999999999984 4789999999999999999863
No 26
>PRK14281 chaperone protein DnaJ; Provisional
Probab=99.53 E-value=9.6e-15 Score=138.26 Aligned_cols=59 Identities=37% Similarity=0.535 Sum_probs=55.0
Q ss_pred cccccccCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHHHHHhcccCC
Q 026520 175 SSDRTILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSLCAALS 237 (237)
Q Consensus 175 ~d~Y~VLGL~~~a~~s~~eIKkAYRkLalk~HPDK~~~~~k~~AeekFq~I~eAYevLsDp~k 237 (237)
.|||+||||++++ +.++||+|||+||++||||++++. +.|+++|++|++||++|+||.+
T Consensus 3 ~d~y~iLgv~~~a--~~~eikkayr~la~~~HPD~~~~~--~~a~~~f~~i~~Ay~vL~d~~~ 61 (397)
T PRK14281 3 RDYYEVLGVSRSA--DKDEIKKAYRKLALKYHPDKNPDN--KEAEEHFKEVNEAYEVLSNDDK 61 (397)
T ss_pred CChhhhcCCCCCC--CHHHHHHHHHHHHHHHCCCcCCCc--hHHHHHHHHHHHHHHHhhhhhh
Confidence 5999999999999 999999999999999999999865 5689999999999999999863
No 27
>PRK14298 chaperone protein DnaJ; Provisional
Probab=99.52 E-value=9.6e-15 Score=137.51 Aligned_cols=58 Identities=41% Similarity=0.591 Sum_probs=54.2
Q ss_pred cccccccCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHHHHHhcccCC
Q 026520 175 SSDRTILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSLCAALS 237 (237)
Q Consensus 175 ~d~Y~VLGL~~~a~~s~~eIKkAYRkLalk~HPDK~~~~~k~~AeekFq~I~eAYevLsDp~k 237 (237)
.|||+||||++++ +.+|||+|||+||++||||+++. +.|+++|++|++||++|+||.+
T Consensus 5 ~d~y~iLgv~~~a--~~~eik~ayr~la~~~HPD~~~~---~~~~~~f~~i~~Ay~vL~d~~k 62 (377)
T PRK14298 5 RDYYEILGLSKDA--SVEDIKKAYRKLAMKYHPDKNKE---PDAEEKFKEISEAYAVLSDAEK 62 (377)
T ss_pred CCHHHhhCCCCCC--CHHHHHHHHHHHHHHhCccccCC---hhHHHHHHHHHHHHHHhcchHh
Confidence 5999999999999 99999999999999999999975 4688999999999999999863
No 28
>PRK14291 chaperone protein DnaJ; Provisional
Probab=99.52 E-value=1.1e-14 Score=137.05 Aligned_cols=58 Identities=34% Similarity=0.490 Sum_probs=54.2
Q ss_pred cccccccCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHHHHHhcccCC
Q 026520 175 SSDRTILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSLCAALS 237 (237)
Q Consensus 175 ~d~Y~VLGL~~~a~~s~~eIKkAYRkLalk~HPDK~~~~~k~~AeekFq~I~eAYevLsDp~k 237 (237)
.|||+||||++++ +.++||+|||+||++||||++++ +.|+++|++|++||++|+||.+
T Consensus 3 ~d~Y~~Lgv~~~a--~~~~ik~ayr~la~~~HPD~~~~---~~~~~~f~~i~~Ay~vLsd~~k 60 (382)
T PRK14291 3 KDYYEILGVSRNA--TQEEIKKAYRRLARKYHPDFNKN---PEAEEKFKEINEAYQVLSDPEK 60 (382)
T ss_pred CCHHHhhCCCCCC--CHHHHHHHHHHHHHHHCCCCCCC---ccHHHHHHHHHHHHHHhcCHHH
Confidence 5999999999999 99999999999999999999986 3689999999999999999863
No 29
>KOG0691 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.50 E-value=1.8e-14 Score=132.58 Aligned_cols=59 Identities=32% Similarity=0.539 Sum_probs=56.0
Q ss_pred ccccccccCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHHHHHhcccC
Q 026520 174 SSSDRTILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSLCAAL 236 (237)
Q Consensus 174 ~~d~Y~VLGL~~~a~~s~~eIKkAYRkLalk~HPDK~~~~~k~~AeekFq~I~eAYevLsDp~ 236 (237)
..|||.||||..++ +..+|++|||.+|++|||||||++ +.|.++|+.|.+||+||+|+.
T Consensus 4 ~~dyY~lLgi~~~a--t~~eIkKaYr~kaL~~HPDKNp~d--P~A~ekFq~L~eAy~VL~D~~ 62 (296)
T KOG0691|consen 4 DTDYYDLLGISEDA--TDAEIKKAYRKKALQYHPDKNPGD--PQAAEKFQELSEAYEVLSDEE 62 (296)
T ss_pred cchHHHHhCCCCCC--CHHHHHHHHHHHHHhcCCCCCCCC--hHHHHHHHHHHHHHHHhcCHH
Confidence 36999999999999 999999999999999999999998 569999999999999999985
No 30
>PRK14290 chaperone protein DnaJ; Provisional
Probab=99.50 E-value=2.5e-14 Score=133.91 Aligned_cols=60 Identities=43% Similarity=0.637 Sum_probs=55.2
Q ss_pred cccccccCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHHHHHhcccCC
Q 026520 175 SSDRTILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSLCAALS 237 (237)
Q Consensus 175 ~d~Y~VLGL~~~a~~s~~eIKkAYRkLalk~HPDK~~~~~k~~AeekFq~I~eAYevLsDp~k 237 (237)
.|||+||||++++ +.+|||+|||+||++||||++++. .+.|+++|++|++||++|+||.+
T Consensus 3 ~d~y~vLgv~~~a--~~~eik~ayr~la~~~HPD~~~~~-~~~a~~~f~~i~~Ay~~L~d~~~ 62 (365)
T PRK14290 3 KDYYKILGVDRNA--SQEDIKKAFRELAKKWHPDLHPGN-KAEAEEKFKEISEAYEVLSDPQK 62 (365)
T ss_pred CChhhhcCCCCCC--CHHHHHHHHHHHHHHHCcCCCCCc-hhHHHHHHHHHHHHHHHhcChhh
Confidence 5999999999999 999999999999999999999764 34699999999999999999863
No 31
>PRK14289 chaperone protein DnaJ; Provisional
Probab=99.50 E-value=2.6e-14 Score=134.56 Aligned_cols=60 Identities=35% Similarity=0.600 Sum_probs=55.6
Q ss_pred ccccccccCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHHHHHhcccCC
Q 026520 174 SSSDRTILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSLCAALS 237 (237)
Q Consensus 174 ~~d~Y~VLGL~~~a~~s~~eIKkAYRkLalk~HPDK~~~~~k~~AeekFq~I~eAYevLsDp~k 237 (237)
..|||+||||++++ +.+|||+|||+||++||||++++. +.|+++|++|++||++|+||.+
T Consensus 4 ~~~~y~~Lgv~~~a--~~~eik~ayr~la~~~HpD~~~~~--~~a~~~f~~i~~Ay~~L~d~~~ 63 (386)
T PRK14289 4 KRDYYEVLGVSKTA--TVDEIKKAYRKKAIQYHPDKNPGD--KEAEEKFKEAAEAYDVLSDPDK 63 (386)
T ss_pred cCCHHHHcCCCCCC--CHHHHHHHHHHHHHHHCCCCCCCC--hHHHHHHHHHHHHHHHhcCHHH
Confidence 36999999999999 999999999999999999999865 5799999999999999999863
No 32
>PRK10266 curved DNA-binding protein CbpA; Provisional
Probab=99.49 E-value=2.6e-14 Score=130.86 Aligned_cols=59 Identities=31% Similarity=0.478 Sum_probs=54.3
Q ss_pred ccccccccCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHHHHHhcccCC
Q 026520 174 SSSDRTILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSLCAALS 237 (237)
Q Consensus 174 ~~d~Y~VLGL~~~a~~s~~eIKkAYRkLalk~HPDK~~~~~k~~AeekFq~I~eAYevLsDp~k 237 (237)
..|||+||||++++ +.++||+|||+||++||||+++. +.|+++|++|++||++|+||.+
T Consensus 3 ~~d~y~~Lgv~~~a--~~~eik~ayr~la~k~HPD~~~~---~~~~~~f~~i~~Ay~~L~~~~k 61 (306)
T PRK10266 3 LKDYYAIMGVKPTD--DLKTIKTAYRRLARKYHPDVSKE---PDAEARFKEVAEAWEVLSDEQR 61 (306)
T ss_pred cCChHHHcCCCCCC--CHHHHHHHHHHHHHHHCcCCCCC---ccHHHHHHHHHHHHHHhhhHHH
Confidence 36999999999999 99999999999999999999875 3689999999999999999863
No 33
>KOG0716 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.48 E-value=3.2e-14 Score=129.06 Aligned_cols=60 Identities=37% Similarity=0.541 Sum_probs=56.7
Q ss_pred ccccccccCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHHHHHhcccCC
Q 026520 174 SSSDRTILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSLCAALS 237 (237)
Q Consensus 174 ~~d~Y~VLGL~~~a~~s~~eIKkAYRkLalk~HPDK~~~~~k~~AeekFq~I~eAYevLsDp~k 237 (237)
.-++|.||||++++ +.++||+|||+||++||||+++++ +++.++|++||.||++|+||.+
T Consensus 30 ~~~LYdVLgl~k~a--t~d~IKKaYR~L~~k~HPD~~gd~--P~~~dkf~eIN~Ay~ILsD~~k 89 (279)
T KOG0716|consen 30 RLDLYDVLGLPKTA--TKDEIKKAYRKLALKYHPDKNGDN--PEATDKFKEINTAYAILSDPTK 89 (279)
T ss_pred hhHHHHHhCCCccc--chHHHHHHHHHHHHHhCCCcCCCC--chhHHHHHHHHHHHHHhcChhh
Confidence 45899999999999 999999999999999999999987 7899999999999999999864
No 34
>PRK14300 chaperone protein DnaJ; Provisional
Probab=99.45 E-value=6.3e-14 Score=131.61 Aligned_cols=58 Identities=31% Similarity=0.395 Sum_probs=53.7
Q ss_pred cccccccCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHHHHHhcccCC
Q 026520 175 SSDRTILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSLCAALS 237 (237)
Q Consensus 175 ~d~Y~VLGL~~~a~~s~~eIKkAYRkLalk~HPDK~~~~~k~~AeekFq~I~eAYevLsDp~k 237 (237)
.|||+||||++++ +.+|||+|||+||++||||+++. +.++++|++|++||++|+|+.+
T Consensus 3 ~~~y~iLgv~~~a--s~~eik~ayr~la~~~HPD~~~~---~~~~~~f~~i~~Ay~~L~d~~~ 60 (372)
T PRK14300 3 QDYYQILGVSKTA--SQADLKKAYLKLAKQYHPDTTDA---KDAEKKFKEINAAYDVLKDEQK 60 (372)
T ss_pred CChHHHcCCCCCC--CHHHHHHHHHHHHHHHCcCCCCC---cCHHHHHHHHHHHHHHhhhHhH
Confidence 5999999999999 99999999999999999999874 3588999999999999999863
No 35
>KOG0715 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.45 E-value=8e-14 Score=127.55 Aligned_cols=59 Identities=32% Similarity=0.481 Sum_probs=55.5
Q ss_pred ccccccccCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHHHHHhcccCC
Q 026520 174 SSSDRTILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSLCAALS 237 (237)
Q Consensus 174 ~~d~Y~VLGL~~~a~~s~~eIKkAYRkLalk~HPDK~~~~~k~~AeekFq~I~eAYevLsDp~k 237 (237)
..|||+||||++++ +..|||+||++||++||||.+.+. .|+++|++|.+||++|+|+++
T Consensus 42 ~~d~Y~vLgv~~~A--t~~EIK~Af~~LaKkyHPD~n~~~---~a~~kF~eI~~AYEiLsd~eK 100 (288)
T KOG0715|consen 42 KEDYYKVLGVSRNA--TLSEIKSAFRKLAKKYHPDVNKDK---EASKKFKEISEAYEILSDEEK 100 (288)
T ss_pred CcchhhhhCcCCCC--CHHHHHHHHHHHHHhhCCCCCCCc---chhhHHHHHHHHHHHhcCHHH
Confidence 34999999999999 999999999999999999999986 899999999999999999864
No 36
>PRK14293 chaperone protein DnaJ; Provisional
Probab=99.44 E-value=1.1e-13 Score=129.99 Aligned_cols=58 Identities=33% Similarity=0.483 Sum_probs=53.9
Q ss_pred cccccccCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHHHHHhcccCC
Q 026520 175 SSDRTILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSLCAALS 237 (237)
Q Consensus 175 ~d~Y~VLGL~~~a~~s~~eIKkAYRkLalk~HPDK~~~~~k~~AeekFq~I~eAYevLsDp~k 237 (237)
.|||+||||++++ +.++||+|||+|+++||||+++.. .|+++|++|++||++|+||.+
T Consensus 3 ~d~y~vLgv~~~a--~~~eik~ayr~la~~~HPD~~~~~---~a~~~f~~i~~Ay~vL~~~~~ 60 (374)
T PRK14293 3 ADYYEILGVSRDA--DKDELKRAYRRLARKYHPDVNKEP---GAEDRFKEINRAYEVLSDPET 60 (374)
T ss_pred CChhhhcCCCCCC--CHHHHHHHHHHHHHHHCCCCCCCc---CHHHHHHHHHHHHHHHhchHH
Confidence 5999999999999 999999999999999999998753 588999999999999999863
No 37
>KOG0718 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.44 E-value=9.6e-14 Score=133.74 Aligned_cols=62 Identities=31% Similarity=0.474 Sum_probs=57.7
Q ss_pred ccccccccCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-CcHHHHHHHHHHHHHHHHHhcccCC
Q 026520 174 SSSDRTILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQG-SSQAMAEEKFKLCLNAYKSLCAALS 237 (237)
Q Consensus 174 ~~d~Y~VLGL~~~a~~s~~eIKkAYRkLalk~HPDK~~~-~~k~~AeekFq~I~eAYevLsDp~k 237 (237)
..++|.+|+|+++| |.+||++|||++++.+||||+.+ +.++.|+++|+.|..||+||+||.+
T Consensus 8 e~e~Ya~LNlpkdA--t~eeI~~AYrr~~~lfHPDkh~dpd~K~~AE~~F~~i~~AyEVLsDp~k 70 (546)
T KOG0718|consen 8 EIELYALLNLPKDA--TDEEIKKAYRRLSRLFHPDKHTDPDQKKAAEEKFQRIQRAYEVLSDPQK 70 (546)
T ss_pred hhhHHHHhCCCccc--CHHHHHHHHHHHHHhcCCcccCChhHHHHHHHHHHHHHHHHHHhcChHH
Confidence 35899999999999 99999999999999999999985 4588999999999999999999964
No 38
>COG2214 CbpA DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones]
Probab=99.42 E-value=2.4e-13 Score=111.87 Aligned_cols=60 Identities=42% Similarity=0.686 Sum_probs=55.3
Q ss_pred ccccccccCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHHHHHhcccC
Q 026520 174 SSSDRTILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSLCAAL 236 (237)
Q Consensus 174 ~~d~Y~VLGL~~~a~~s~~eIKkAYRkLalk~HPDK~~~~~k~~AeekFq~I~eAYevLsDp~ 236 (237)
..++|+||||++++ +..+|++|||++|++||||+++.... .++++|+.|++||++|+|+.
T Consensus 5 ~~~~y~iLgv~~~a--s~~eik~ayrkla~~~HPD~~~~~~~-~a~~~f~~i~~Ay~vLsd~~ 64 (237)
T COG2214 5 LLDYYEILGVPPNA--SLEEIKKAYRKLALKYHPDRNPGDPK-VAEEKFKEINEAYEILSDPE 64 (237)
T ss_pred hhhHHHHhCCCCCC--CHHHHHHHHHHHHHHhCCCCCCCchh-HHHHHHHHHHHHHHHhhCHH
Confidence 46899999999999 99999999999999999999998732 59999999999999999975
No 39
>KOG0719 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.40 E-value=2.1e-13 Score=122.07 Aligned_cols=63 Identities=25% Similarity=0.406 Sum_probs=58.1
Q ss_pred CCccccccccCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHHHHHhcccC
Q 026520 172 VGSSSDRTILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSLCAAL 236 (237)
Q Consensus 172 ~~~~d~Y~VLGL~~~a~~s~~eIKkAYRkLalk~HPDK~~~~~k~~AeekFq~I~eAYevLsDp~ 236 (237)
....|+|+||||.+++ +..+|++||++|+|+||||+++...+.+|.++|++|+.||++|+|..
T Consensus 11 f~~~d~YevLGVer~a--~~~eIrkAY~klal~~HPDk~~eed~~ea~~kFq~l~k~y~iLsDee 73 (264)
T KOG0719|consen 11 FNKKDLYEVLGVERDA--TDKEIRKAYHKLALRLHPDKNHEEDKVEATEKFQQLQKAYQILSDEE 73 (264)
T ss_pred ccccCHHHHhhhcccC--CHHHHHHHHHHHHHHhCCCcchhhhHHHHHHHHHHHHHHHHHhhHHH
Confidence 3445999999999999 99999999999999999999987668899999999999999999864
No 40
>KOG0721 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.37 E-value=6.8e-13 Score=117.47 Aligned_cols=58 Identities=33% Similarity=0.509 Sum_probs=54.2
Q ss_pred cccccccCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHHHHHhcccC
Q 026520 175 SSDRTILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSLCAAL 236 (237)
Q Consensus 175 ~d~Y~VLGL~~~a~~s~~eIKkAYRkLalk~HPDK~~~~~k~~AeekFq~I~eAYevLsDp~ 236 (237)
-|+|+||||++++ ++.|||+|||.|++++||||++.. .+.++.|..|.+||+.|+|++
T Consensus 99 fDPyEILGl~pga--s~~eIKkaYR~LSik~HPDK~~~~--~~~e~~~~~I~KAY~aLTD~~ 156 (230)
T KOG0721|consen 99 FDPYEILGLDPGA--SEKEIKKAYRRLSIKYHPDKQPPE--EGDEEFFEAIAKAYQALTDKK 156 (230)
T ss_pred CCcHHhhCCCCCC--CHHHHHHHHHHhhhhhCCCcCCCc--chhHHHHHHHHHHHHHhcchh
Confidence 4999999999999 999999999999999999999875 478889999999999999986
No 41
>PTZ00341 Ring-infected erythrocyte surface antigen; Provisional
Probab=99.36 E-value=7.3e-13 Score=136.48 Aligned_cols=60 Identities=22% Similarity=0.267 Sum_probs=55.3
Q ss_pred CCccccccccCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHHHHHhcccC
Q 026520 172 VGSSSDRTILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSLCAAL 236 (237)
Q Consensus 172 ~~~~d~Y~VLGL~~~a~~s~~eIKkAYRkLalk~HPDK~~~~~k~~AeekFq~I~eAYevLsDp~ 236 (237)
+...+||+||||+++| +..+||+|||+||++||||++++. .|.++|+.|++||+||+||.
T Consensus 570 ~~d~dYYdILGVs~dA--S~~EIKKAYRKLAlkyHPDKN~~~---~A~ekFq~I~EAYeVLSDp~ 629 (1136)
T PTZ00341 570 IPDTLFYDILGVGVNA--DMKEISERYFKLAENYYPPKRSGN---EGFHKFKKINEAYQILGDID 629 (1136)
T ss_pred CCCCChHHHcCCCCCC--CHHHHHHHHHHHHHHhCCCCCCCc---hHHHHHHHHHHHHHHhCCHH
Confidence 3347999999999999 999999999999999999999874 58889999999999999986
No 42
>PRK05014 hscB co-chaperone HscB; Provisional
Probab=99.36 E-value=1.4e-12 Score=111.26 Aligned_cols=61 Identities=23% Similarity=0.352 Sum_probs=54.6
Q ss_pred ccccccCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCc---HHHHHHHHHHHHHHHHHhcccC
Q 026520 176 SDRTILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQGSS---QAMAEEKFKLCLNAYKSLCAAL 236 (237)
Q Consensus 176 d~Y~VLGL~~~a~~s~~eIKkAYRkLalk~HPDK~~~~~---k~~AeekFq~I~eAYevLsDp~ 236 (237)
+||+||||++...++..+|+++||++++++|||++.... +..+.+.|..|++||++|+||.
T Consensus 2 ~yf~llgl~~~~~~d~~~L~~~yr~l~~~~HPDk~~~~~~~~~~~a~~~s~~iN~AY~~L~dp~ 65 (171)
T PRK05014 2 DYFTLFGLPARYDIDTQLLASRYQELQRQFHPDKFANASERERLLAVQQAATINDAYQTLKHPL 65 (171)
T ss_pred CHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHCChh
Confidence 799999999987678999999999999999999987543 4457889999999999999996
No 43
>PRK00294 hscB co-chaperone HscB; Provisional
Probab=99.33 E-value=2.7e-12 Score=110.00 Aligned_cols=65 Identities=28% Similarity=0.388 Sum_probs=58.0
Q ss_pred CccccccccCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCc---HHHHHHHHHHHHHHHHHhcccCC
Q 026520 173 GSSSDRTILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQGSS---QAMAEEKFKLCLNAYKSLCAALS 237 (237)
Q Consensus 173 ~~~d~Y~VLGL~~~a~~s~~eIKkAYRkLalk~HPDK~~~~~---k~~AeekFq~I~eAYevLsDp~k 237 (237)
+..+||++|||++...++..+|+++||+|++++|||++.+.. +..+.+.+..||+||++|+||.+
T Consensus 2 ~~~~~F~l~~l~~~f~id~~~L~~~Yr~Lq~~~HPDk~~~~~~~e~~~a~~~s~~IN~AY~~L~~p~~ 69 (173)
T PRK00294 2 GTPCHFALFDLQPSFRLDLDQLATRYRELAREVHPDRFADAPEREQRLALERSASLNEAYQTLKSPPR 69 (173)
T ss_pred CCCChhhhcCcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhCChhh
Confidence 457999999999998889999999999999999999987643 45678899999999999999963
No 44
>PHA03102 Small T antigen; Reviewed
Probab=99.33 E-value=8.7e-13 Score=111.30 Aligned_cols=57 Identities=33% Similarity=0.423 Sum_probs=51.7
Q ss_pred ccccccccCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHHHHHhcccC
Q 026520 174 SSSDRTILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSLCAAL 236 (237)
Q Consensus 174 ~~d~Y~VLGL~~~a~~s~~eIKkAYRkLalk~HPDK~~~~~k~~AeekFq~I~eAYevLsDp~ 236 (237)
...+|+||||++++..+.++||+|||++|+++|||++++ +++|+.|++||++|+|+.
T Consensus 4 ~~~l~~vLGl~~~A~~s~~eIKkAYr~la~~~HPDkgg~------~e~~k~in~Ay~~L~d~~ 60 (153)
T PHA03102 4 SKELMDLLGLPRSAWGNLPLMRKAYLRKCLEFHPDKGGD------EEKMKELNTLYKKFRESV 60 (153)
T ss_pred HHHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCch------hHHHHHHHHHHHHHhhHH
Confidence 357899999999988899999999999999999999754 479999999999999875
No 45
>PRK01356 hscB co-chaperone HscB; Provisional
Probab=99.31 E-value=2.4e-12 Score=109.41 Aligned_cols=62 Identities=26% Similarity=0.304 Sum_probs=54.3
Q ss_pred cccccccCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCc-HHHHHHHHHHHHHHHHHhcccC
Q 026520 175 SSDRTILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQGSS-QAMAEEKFKLCLNAYKSLCAAL 236 (237)
Q Consensus 175 ~d~Y~VLGL~~~a~~s~~eIKkAYRkLalk~HPDK~~~~~-k~~AeekFq~I~eAYevLsDp~ 236 (237)
.+||+||||++...++..+|+++||++++++|||++.... +..+.+.+..|++||++|+||.
T Consensus 2 ~~yf~llgl~~~f~id~~~L~~aYr~lq~~~HPDk~~~~~~k~~~~~~s~~in~AY~~L~dp~ 64 (166)
T PRK01356 2 QNYFQLLGLPQEYNIDLKILEKQYFAMQVKYHPDKAKTLQEKEQNLIIASELNNAYSTLKDAL 64 (166)
T ss_pred CCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCHHHHHHHHHHHHHHHHHHHHhCCHH
Confidence 5899999999997679999999999999999999987532 3445677999999999999996
No 46
>PRK09430 djlA Dna-J like membrane chaperone protein; Provisional
Probab=99.31 E-value=2.2e-12 Score=116.74 Aligned_cols=62 Identities=26% Similarity=0.307 Sum_probs=54.3
Q ss_pred CCccccccccCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-----CcHHHHHHHHHHHHHHHHHhccc
Q 026520 172 VGSSSDRTILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQG-----SSQAMAEEKFKLCLNAYKSLCAA 235 (237)
Q Consensus 172 ~~~~d~Y~VLGL~~~a~~s~~eIKkAYRkLalk~HPDK~~~-----~~k~~AeekFq~I~eAYevLsDp 235 (237)
+...++|+||||++++ |.++||+|||+|+++||||+..+ ...+.|+++|++|++||++|+..
T Consensus 197 ~~~~~ay~vLgv~~~a--s~~eIk~aYr~L~~~~HPDk~~~~g~~~~~~~~a~ek~~~I~~AYe~L~~~ 263 (267)
T PRK09430 197 PTLEDAYKVLGVSESD--DDQEIKRAYRKLMSEHHPDKLVAKGLPPEMMEMAKEKAQEIQAAYELIKKQ 263 (267)
T ss_pred CcHHhHHHHcCCCCCC--CHHHHHHHHHHHHHHhCcCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHh
Confidence 3447999999999999 99999999999999999999743 22567999999999999999853
No 47
>PRK03578 hscB co-chaperone HscB; Provisional
Probab=99.29 E-value=6.9e-12 Score=107.60 Aligned_cols=62 Identities=23% Similarity=0.352 Sum_probs=54.7
Q ss_pred cccccccCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCc---HHHHHHHHHHHHHHHHHhcccC
Q 026520 175 SSDRTILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQGSS---QAMAEEKFKLCLNAYKSLCAAL 236 (237)
Q Consensus 175 ~d~Y~VLGL~~~a~~s~~eIKkAYRkLalk~HPDK~~~~~---k~~AeekFq~I~eAYevLsDp~ 236 (237)
.+||+||||++...++..+|+++||+|++++|||+++... +..+.+.+..||+||++|+||.
T Consensus 6 ~dyf~llglp~~f~~d~~~L~~~yr~lq~~~HPD~~~~~~~~e~~~a~~~s~~iN~AY~tL~~p~ 70 (176)
T PRK03578 6 DDHFSLFGLPARFALDEAALDAAYRTVQAQVHPDRFAAAGDAEKRVAMQWATRANEAYQTLRDPL 70 (176)
T ss_pred CCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhCChh
Confidence 5999999999987679999999999999999999987543 3446777899999999999996
No 48
>PTZ00100 DnaJ chaperone protein; Provisional
Probab=99.26 E-value=5.9e-12 Score=102.02 Aligned_cols=54 Identities=20% Similarity=0.262 Sum_probs=47.9
Q ss_pred CCccccccccCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHHHHHhc
Q 026520 172 VGSSSDRTILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSLC 233 (237)
Q Consensus 172 ~~~~d~Y~VLGL~~~a~~s~~eIKkAYRkLalk~HPDK~~~~~k~~AeekFq~I~eAYevLs 233 (237)
+...++|+||||++++ +.++|+++||+|++++|||+.+ ..+.|++|++||++|.
T Consensus 62 Ms~~eAy~ILGv~~~A--s~~eIkkaYRrLa~~~HPDkgG------s~~~~~kIneAyevL~ 115 (116)
T PTZ00100 62 MSKSEAYKILNISPTA--SKERIREAHKQLMLRNHPDNGG------STYIASKVNEAKDLLL 115 (116)
T ss_pred CCHHHHHHHcCCCCCC--CHHHHHHHHHHHHHHhCCCCCC------CHHHHHHHHHHHHHHh
Confidence 3346999999999999 9999999999999999999853 2478899999999995
No 49
>KOG0624 consensus dsRNA-activated protein kinase inhibitor P58, contains TPR and DnaJ domains [Defense mechanisms]
Probab=99.18 E-value=1.6e-11 Score=116.12 Aligned_cols=66 Identities=29% Similarity=0.402 Sum_probs=61.0
Q ss_pred cCCCccccccccCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCc-HHHHHHHHHHHHHHHHHhcccCC
Q 026520 170 CTVGSSSDRTILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQGSS-QAMAEEKFKLCLNAYKSLCAALS 237 (237)
Q Consensus 170 ~~~~~~d~Y~VLGL~~~a~~s~~eIKkAYRkLalk~HPDK~~~~~-k~~AeekFq~I~eAYevLsDp~k 237 (237)
...+.+|||.||||.+++ +..||.+|||++|++||||-..+.. +..|+.+|..|..|-+||+||.+
T Consensus 389 kqs~kRDYYKILGVkRnA--sKqEI~KAYRKlAqkWHPDNFqdEeEKKkAEKKFIDIAAAKEVLsd~Ek 455 (504)
T KOG0624|consen 389 KQSGKRDYYKILGVKRNA--SKQEITKAYRKLAQKWHPDNFQDEEEKKKAEKKFIDIAAAKEVLSDPEK 455 (504)
T ss_pred HHhccchHHHHhhhcccc--cHHHHHHHHHHHHHhcCCccccCHHHHHHHHHhhhhHHHHHHhhcCHHH
Confidence 356778999999999999 9999999999999999999998875 77899999999999999999963
No 50
>KOG0714 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.12 E-value=3.9e-11 Score=103.71 Aligned_cols=60 Identities=38% Similarity=0.574 Sum_probs=55.2
Q ss_pred cccccccCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHHHHHhcccCC
Q 026520 175 SSDRTILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSLCAALS 237 (237)
Q Consensus 175 ~d~Y~VLGL~~~a~~s~~eIKkAYRkLalk~HPDK~~~~~k~~AeekFq~I~eAYevLsDp~k 237 (237)
.|+|.||||.+.+ +.++|++||+.+|++||||+++.. ...|+.+|++|.+||++|+|+.+
T Consensus 3 ~d~~~~l~i~~~a--s~~~i~ka~~~~a~~~hpdk~~~~-~~~~~~~~~~~~ea~~~ls~~~k 62 (306)
T KOG0714|consen 3 KDYYKILGIARSA--SEEDIKKAYRKLALKYHPDKNPSP-KEVAEAKFKEIAEAYEVLSDPKK 62 (306)
T ss_pred ccHHHHhCccccc--cHHHHHHHHHHHHHhhCCCCCCCc-hhhHHHHHhhhhccccccCCHHH
Confidence 5899999999999 888999999999999999998887 67788899999999999999863
No 51
>KOG0720 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.06 E-value=1e-10 Score=112.66 Aligned_cols=65 Identities=28% Similarity=0.344 Sum_probs=58.1
Q ss_pred cccCCCccccccccCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHHHHHhcccCC
Q 026520 168 EQCTVGSSSDRTILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSLCAALS 237 (237)
Q Consensus 168 ~~~~~~~~d~Y~VLGL~~~a~~s~~eIKkAYRkLalk~HPDK~~~~~k~~AeekFq~I~eAYevLsDp~k 237 (237)
........|+|.||||+++. +.++||+.||++|+..||||+.. +.|+|.|+.|+.||++|+|+.+
T Consensus 228 l~re~~~~daYsvlGl~~d~--sd~~lKk~Yrk~A~LVhPDKn~~---~~A~Eafk~Lq~Afevig~~~k 292 (490)
T KOG0720|consen 228 LSRELNILDAYSALGLPSDC--SDADLKKNYRKKAMLVHPDKNMI---PRAEEAFKKLQVAFEVIGDSVK 292 (490)
T ss_pred hhhhhcCCCchhhcCCCCCC--CHHHHHHHHHhhceEeCCCccCC---hhHHHHHHHHHHHHHHhcchhh
Confidence 33444468999999999999 99999999999999999999984 5899999999999999999863
No 52
>PRK01773 hscB co-chaperone HscB; Provisional
Probab=98.98 E-value=9e-10 Score=94.47 Aligned_cols=62 Identities=21% Similarity=0.203 Sum_probs=56.8
Q ss_pred cccccccCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCc---HHHHHHHHHHHHHHHHHhcccC
Q 026520 175 SSDRTILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQGSS---QAMAEEKFKLCLNAYKSLCAAL 236 (237)
Q Consensus 175 ~d~Y~VLGL~~~a~~s~~eIKkAYRkLalk~HPDK~~~~~---k~~AeekFq~I~eAYevLsDp~ 236 (237)
.|||++|||++...++...|++.|+.|..++|||+....+ +..+.+.-..||+||++|.||.
T Consensus 2 ~nyF~lf~lp~~F~iD~~~L~~~y~~Lq~~~HPD~f~~~~~~eq~~a~~~ss~iN~AY~tLkdPl 66 (173)
T PRK01773 2 NNPFALFDLPVDFQLDNALLSERYLALQKSLHPDNFANSSAQEQRLAMQKSAEVNDALQILKDPI 66 (173)
T ss_pred CChHHhcCCCCCCCCCHHHHHHHHHHHHHHhCcCcccCCCHHHHHHHHHHHHHHHHHHHHHCChH
Confidence 5899999999999899999999999999999999987654 5668889999999999999996
No 53
>PHA02624 large T antigen; Provisional
Probab=98.98 E-value=2.9e-10 Score=113.43 Aligned_cols=58 Identities=31% Similarity=0.377 Sum_probs=52.1
Q ss_pred CccccccccCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHHHHHhcccC
Q 026520 173 GSSSDRTILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSLCAAL 236 (237)
Q Consensus 173 ~~~d~Y~VLGL~~~a~~s~~eIKkAYRkLalk~HPDK~~~~~k~~AeekFq~I~eAYevLsDp~ 236 (237)
+..++|+||||++++..+.++||+|||++|++||||+.++ +++|++|++||++|+|+.
T Consensus 9 e~~elyelLGL~~~A~gs~~eIKkAYRkLAkkyHPDKgGd------eekfk~Ln~AYevL~d~~ 66 (647)
T PHA02624 9 ESKELMDLLGLPMAAWGNLPLMRKAYLRKCKEYHPDKGGD------EEKMKRLNSLYKKLQEGV 66 (647)
T ss_pred HHHHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCc------HHHHHHHHHHHHHHhcHH
Confidence 3468999999999888899999999999999999999643 589999999999999864
No 54
>KOG0550 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=98.96 E-value=3.8e-10 Score=108.18 Aligned_cols=61 Identities=39% Similarity=0.511 Sum_probs=57.5
Q ss_pred CccccccccCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHHHHHhcccC
Q 026520 173 GSSSDRTILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSLCAAL 236 (237)
Q Consensus 173 ~~~d~Y~VLGL~~~a~~s~~eIKkAYRkLalk~HPDK~~~~~k~~AeekFq~I~eAYevLsDp~ 236 (237)
...|+|.||||...+ +..+||+|||++++.||||++.+. +.++|.+|++|.+||.+|+||.
T Consensus 371 kRkd~ykilGi~~~a--s~~eikkayrk~AL~~Hpd~~ags-q~eaE~kFkevgeAy~il~d~~ 431 (486)
T KOG0550|consen 371 KRKDWYKILGISRNA--SDDEIKKAYRKLALVHHPDKNAGS-QKEAEAKFKEVGEAYTILSDPM 431 (486)
T ss_pred hhhhHHHHhhhhhhc--ccchhhhHHHHHHHHhCCCcCcch-hHHHHHHHHHHHHHHHHhcCHH
Confidence 356999999999999 999999999999999999999887 7889999999999999999985
No 55
>KOG0722 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=98.93 E-value=4.3e-10 Score=102.35 Aligned_cols=61 Identities=21% Similarity=0.361 Sum_probs=55.4
Q ss_pred CCCccccccccCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHHHHHhcccC
Q 026520 171 TVGSSSDRTILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSLCAAL 236 (237)
Q Consensus 171 ~~~~~d~Y~VLGL~~~a~~s~~eIKkAYRkLalk~HPDK~~~~~k~~AeekFq~I~eAYevLsDp~ 236 (237)
+-+..|.|+||||.+++ +..+|.+|||+||+++|||++++. ++.+.|+.|..||++|.|..
T Consensus 29 YCG~enCYdVLgV~Rea--~KseIakAYRqLARrhHPDr~r~~---e~k~~F~~iAtayeilkd~e 89 (329)
T KOG0722|consen 29 YCGAENCYDVLGVAREA--NKSEIAKAYRQLARRHHPDRNRDP---ESKKLFVKIATAYEILKDNE 89 (329)
T ss_pred cccchhHHHHhhhhhhc--cHHHHHHHHHHHHHHhCCcccCCc---hhhhhhhhhhcccccccchh
Confidence 34678999999999999 999999999999999999999985 55689999999999999864
No 56
>COG5407 SEC63 Preprotein translocase subunit Sec63 [Intracellular trafficking and secretion]
Probab=98.88 E-value=1.2e-09 Score=105.81 Aligned_cols=59 Identities=31% Similarity=0.465 Sum_probs=55.6
Q ss_pred ccccccCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCC---CcHHHHHHHHHHHHHHHHHhcccC
Q 026520 176 SDRTILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQG---SSQAMAEEKFKLCLNAYKSLCAAL 236 (237)
Q Consensus 176 d~Y~VLGL~~~a~~s~~eIKkAYRkLalk~HPDK~~~---~~k~~AeekFq~I~eAYevLsDp~ 236 (237)
|+|+||||..++ +..+||++||+|++++||||.+. ..+.+.|+++++|++||..|+|.+
T Consensus 99 DPyEILGI~~~t--s~rdik~~yr~Ls~KfhpdK~~~mvn~~rse~Ee~y~~ItkAY~~lTd~k 160 (610)
T COG5407 99 DPYEILGIDQDT--SERDIKKRYRMLSMKFHPDKAPPMVNELRSEYEEKYKTITKAYGLLTDKK 160 (610)
T ss_pred ChHHhhcccCCC--cHHHHHHHHHhheeecChhhcCCCChhHHHHHHHHHHHHHHHHHhhhhHH
Confidence 999999999999 99999999999999999999987 458889999999999999999864
No 57
>KOG0712 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=98.72 E-value=9.4e-09 Score=96.38 Aligned_cols=38 Identities=37% Similarity=0.674 Sum_probs=35.9
Q ss_pred cccccccCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCc
Q 026520 175 SSDRTILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQGSS 214 (237)
Q Consensus 175 ~d~Y~VLGL~~~a~~s~~eIKkAYRkLalk~HPDK~~~~~ 214 (237)
..+|.||||.++| +.+|||+|||+||++|||||+++..
T Consensus 4 ~~~y~il~v~~~A--s~~eikkayrkla~k~HpDkn~~~~ 41 (337)
T KOG0712|consen 4 TKLYDILGVSPDA--SEEEIKKAYRKLALKYHPDKNPDAG 41 (337)
T ss_pred cccceeeccCCCc--CHHHHHHHHHHHHHHhCCCCCccHH
Confidence 5799999999999 9999999999999999999999853
No 58
>KOG1150 consensus Predicted molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=98.64 E-value=2.7e-08 Score=88.03 Aligned_cols=59 Identities=25% Similarity=0.380 Sum_probs=55.0
Q ss_pred cccccccCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHHHHHhcccC
Q 026520 175 SSDRTILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSLCAAL 236 (237)
Q Consensus 175 ~d~Y~VLGL~~~a~~s~~eIKkAYRkLalk~HPDK~~~~~k~~AeekFq~I~eAYevLsDp~ 236 (237)
-++|+||.|.|.. +.++||+.||+|++..||||++++ .+.|...|-.|..||..|-|+.
T Consensus 53 LNpfeVLqIdpev--~~edikkryRklSilVHPDKN~Dd-~~rAqkAFdivkKA~k~l~n~~ 111 (250)
T KOG1150|consen 53 LNPFEVLQIDPEV--TDEDIKKRYRKLSILVHPDKNPDD-AERAQKAFDIVKKAYKLLENDK 111 (250)
T ss_pred cChHHHHhcCCCC--CHHHHHHHHHhhheeecCCCCccc-HHHHHHHHHHHHHHHHHHhCHH
Confidence 4899999999999 999999999999999999999987 5778999999999999998864
No 59
>PRK14284 chaperone protein DnaJ; Provisional
Probab=98.64 E-value=3.6e-08 Score=93.46 Aligned_cols=36 Identities=39% Similarity=0.704 Sum_probs=34.6
Q ss_pred ccccccCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC
Q 026520 176 SDRTILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQGS 213 (237)
Q Consensus 176 d~Y~VLGL~~~a~~s~~eIKkAYRkLalk~HPDK~~~~ 213 (237)
|||+||||++++ +.++||+|||+||++||||++++.
T Consensus 2 d~y~iLgv~~~a--~~~eikkayr~la~~~HPD~~~~~ 37 (391)
T PRK14284 2 DYYTILGVSKTA--SPEEIKKAYRKLAVKYHPDKNPGD 37 (391)
T ss_pred CHHHhcCCCCCC--CHHHHHHHHHHHHHHHCcCCCCCc
Confidence 899999999999 999999999999999999999865
No 60
>TIGR02349 DnaJ_bact chaperone protein DnaJ. This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.
Probab=98.58 E-value=8.6e-08 Score=89.37 Aligned_cols=35 Identities=31% Similarity=0.593 Sum_probs=33.5
Q ss_pred ccccccCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCC
Q 026520 176 SDRTILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQG 212 (237)
Q Consensus 176 d~Y~VLGL~~~a~~s~~eIKkAYRkLalk~HPDK~~~ 212 (237)
|||+||||++++ +.++||+|||+||++||||+++.
T Consensus 1 d~y~~Lgv~~~a--~~~~ik~ayr~la~~~HPD~~~~ 35 (354)
T TIGR02349 1 DYYEILGVSKDA--SEEEIKKAYRKLAKKYHPDRNKD 35 (354)
T ss_pred ChHHhCCCCCCC--CHHHHHHHHHHHHHHHCCCCCCC
Confidence 699999999999 99999999999999999999973
No 61
>PRK14292 chaperone protein DnaJ; Provisional
Probab=98.56 E-value=9.8e-08 Score=89.69 Aligned_cols=36 Identities=33% Similarity=0.641 Sum_probs=34.4
Q ss_pred cccccccCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCC
Q 026520 175 SSDRTILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQG 212 (237)
Q Consensus 175 ~d~Y~VLGL~~~a~~s~~eIKkAYRkLalk~HPDK~~~ 212 (237)
.|||+||||++++ +.++||+|||+||++||||+++.
T Consensus 2 ~d~y~~Lgv~~~a--~~~~ik~ayr~l~~~~hpD~~~~ 37 (371)
T PRK14292 2 MDYYELLGVSRTA--SADEIKSAYRKLALKYHPDRNKE 37 (371)
T ss_pred CChHHHcCCCCCC--CHHHHHHHHHHHHHHHCCCCCCC
Confidence 4899999999999 99999999999999999999975
No 62
>COG5269 ZUO1 Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones]
Probab=98.31 E-value=3.3e-07 Score=84.52 Aligned_cols=66 Identities=23% Similarity=0.240 Sum_probs=55.6
Q ss_pred CCCccccccccCcCCCCC-CCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHHHHHhcccC
Q 026520 171 TVGSSSDRTILGLPPSGP-LKLDDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSLCAAL 236 (237)
Q Consensus 171 ~~~~~d~Y~VLGL~~~a~-~s~~eIKkAYRkLalk~HPDK~~~~~k~~AeekFq~I~eAYevLsDp~ 236 (237)
.....|+|.+|||+.-.. ++..+|.+|.++.+.+||||+.....-..+.+.|+.|+.||+||+|+.
T Consensus 39 ~Wk~~DlYa~lgLskyR~ka~~~qi~kah~kkv~kyHPDk~aa~g~~~~d~fFk~iqkA~evL~D~~ 105 (379)
T COG5269 39 NWKKVDLYALLGLSKYRTKAIPPQILKAHKKKVYKYHPDKTAAGGNKGCDEFFKLIQKAREVLGDRK 105 (379)
T ss_pred hhhhhhHHHHhchHhhhcCCCcHHHHHHHHHHHHHhCccchhccCCCCcHHHHHHHHHHHHHhccHH
Confidence 345579999999998765 688899999999999999999843323467889999999999999974
No 63
>KOG1789 consensus Endocytosis protein RME-8, contains DnaJ domain [Intracellular trafficking, secretion, and vesicular transport; Posttranslational modification, protein turnover, chaperones]
Probab=98.20 E-value=1.4e-06 Score=91.38 Aligned_cols=61 Identities=26% Similarity=0.389 Sum_probs=50.8
Q ss_pred ccCCCccccccccCcCCCCC-C-CHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHHHHHhcc
Q 026520 169 QCTVGSSSDRTILGLPPSGP-L-KLDDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSLCA 234 (237)
Q Consensus 169 ~~~~~~~d~Y~VLGL~~~a~-~-s~~eIKkAYRkLalk~HPDK~~~~~k~~AeekFq~I~eAYevLsD 234 (237)
+..+...++|+||.|+-+.- . ..+.||++|++||.+|||||+|. ..++|..|++||+.|+.
T Consensus 1275 P~~mS~d~A~eiL~i~l~n~~hD~~~KirrqY~kLA~kYHPDKNPE-----GRemFe~VnKAYE~L~~ 1337 (2235)
T KOG1789|consen 1275 PATMSVDLAREILSVDLTNEEHDKPAKIRRQYYKLAAKYHPDKNPE-----GREMFERVNKAYELLSS 1337 (2235)
T ss_pred CCccchHHHHHHhccccCCCCcccHHHHHHHHHHHHHHhCCCCCch-----HHHHHHHHHHHHHHHHH
Confidence 44456678999999886543 2 34789999999999999999996 47999999999999983
No 64
>TIGR03835 termin_org_DnaJ terminal organelle assembly protein TopJ. This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility.
Probab=98.13 E-value=4.1e-06 Score=85.83 Aligned_cols=36 Identities=31% Similarity=0.571 Sum_probs=34.6
Q ss_pred cccccccCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCC
Q 026520 175 SSDRTILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQG 212 (237)
Q Consensus 175 ~d~Y~VLGL~~~a~~s~~eIKkAYRkLalk~HPDK~~~ 212 (237)
.|||+||||++++ +..+||+|||+|+++||||+++.
T Consensus 2 ~DYYeVLGVs~dA--S~eEIKKAYRKLAKKyHPDKn~~ 37 (871)
T TIGR03835 2 RDYYEVLGIDRDA--DEQEIKKAFRKLAKKYHPDRNKA 37 (871)
T ss_pred CChhHhcCCCCCC--CHHHHHHHHHHHHHHHCcCCCCC
Confidence 5899999999999 99999999999999999999886
No 65
>KOG0723 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=97.89 E-value=1.8e-05 Score=63.75 Aligned_cols=56 Identities=27% Similarity=0.255 Sum_probs=49.1
Q ss_pred CCccccccccCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHHHHHhccc
Q 026520 172 VGSSSDRTILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSLCAA 235 (237)
Q Consensus 172 ~~~~d~Y~VLGL~~~a~~s~~eIKkAYRkLalk~HPDK~~~~~k~~AeekFq~I~eAYevLsDp 235 (237)
|..+.+-.||||.++. +.+.||.|+|++++..|||+.+.+ ..-..|++|+++|...
T Consensus 53 Msr~EA~lIL~v~~s~--~k~KikeaHrriM~~NHPD~GGSP------YlAsKINEAKdlLe~~ 108 (112)
T KOG0723|consen 53 MSRREAALILGVTPSL--DKDKIKEAHRRIMLANHPDRGGSP------YLASKINEAKDLLEGT 108 (112)
T ss_pred cchHHHHHHhCCCccc--cHHHHHHHHHHHHHcCCCcCCCCH------HHHHHHHHHHHHHhcc
Confidence 4456788999999999 999999999999999999999876 5667899999999753
No 66
>KOG0568 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=97.76 E-value=3.6e-05 Score=69.96 Aligned_cols=55 Identities=25% Similarity=0.326 Sum_probs=49.1
Q ss_pred cccccccCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHHHH-Hhcc
Q 026520 175 SSDRTILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYK-SLCA 234 (237)
Q Consensus 175 ~d~Y~VLGL~~~a~~s~~eIKkAYRkLalk~HPDK~~~~~k~~AeekFq~I~eAYe-vLsD 234 (237)
..+|.||||..++ +.++|+.||..|++++|||..... ...+.|++|.+||. ||..
T Consensus 47 ~e~fril~v~e~~--~adevr~af~~lakq~hpdsgs~~---adaa~f~qideafrkvlq~ 102 (342)
T KOG0568|consen 47 MECFRILGVEEGA--DADEVREAFHDLAKQVHPDSGSEE---ADAARFIQIDEAFRKVLQE 102 (342)
T ss_pred HHHHHHhcccccC--chhHHHHHHHHHHHHcCCCCCCcc---ccHHHHHHHHHHHHHHHHH
Confidence 3789999999999 999999999999999999988763 56788999999998 7764
No 67
>COG1076 DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones]
Probab=97.14 E-value=0.00028 Score=60.16 Aligned_cols=56 Identities=25% Similarity=0.360 Sum_probs=49.9
Q ss_pred cccccccCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC-----cHHHHHHHHHHHHHHHHHh
Q 026520 175 SSDRTILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQGS-----SQAMAEEKFKLCLNAYKSL 232 (237)
Q Consensus 175 ~d~Y~VLGL~~~a~~s~~eIKkAYRkLalk~HPDK~~~~-----~k~~AeekFq~I~eAYevL 232 (237)
.++|.+||+.... ...+|+++|+++....|||+.... ....++++++.|++||+.+
T Consensus 113 ~~~l~~l~~~~~~--~~~~i~~~~r~l~~e~~~d~a~~~~~~~e~~~~~~~~~~~i~~a~~~~ 173 (174)
T COG1076 113 EDALKVLGVEIKA--DQDAIKKAYRKLLSEQHPDKAAAKGLKLEFIEKLKEKLQEIQEAYEDI 173 (174)
T ss_pred hhHHHHhcCchhh--hHHHHHHHHHHHHHhcCHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhc
Confidence 6899999999999 999999999999999999996432 2577999999999999865
No 68
>KOG0431 consensus Auxilin-like protein and related proteins containing DnaJ domain [General function prediction only]
Probab=96.88 E-value=0.0013 Score=64.29 Aligned_cols=51 Identities=27% Similarity=0.374 Sum_probs=39.6
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCc-----HHHHHHHHHHHHHHHHHhc
Q 026520 183 LPPSGPLKLDDVKNAFRLSALKWHPDKHQGSS-----QAMAEEKFKLCLNAYKSLC 233 (237)
Q Consensus 183 L~~~a~~s~~eIKkAYRkLalk~HPDK~~~~~-----k~~AeekFq~I~eAYevLs 233 (237)
|+...-++.++||+|||+-+|..||||.+... +=+|++.|-.+++||+...
T Consensus 394 VsltDLVtp~~VKKaYrKA~L~VHPDKlqq~gas~~qK~Iaekvfd~l~eawn~f~ 449 (453)
T KOG0431|consen 394 VSLTDLVTPAQVKKAYRKAVLCVHPDKLQQKGASLEQKYIAEKVFDALSEAWNKFN 449 (453)
T ss_pred CchhhccCHHHHHHHHHhhhheeCcccccCCcccHHHHHHHHHHHHHHHHHHHhhh
Confidence 33333358999999999999999999997652 4557888888888887643
No 69
>KOG3192 consensus Mitochondrial J-type chaperone [Posttranslational modification, protein turnover, chaperones]
Probab=96.76 E-value=0.0014 Score=56.26 Aligned_cols=65 Identities=26% Similarity=0.235 Sum_probs=54.2
Q ss_pred CccccccccCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCc---HHHHHHHHHHHHHHHHHhcccCC
Q 026520 173 GSSSDRTILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQGSS---QAMAEEKFKLCLNAYKSLCAALS 237 (237)
Q Consensus 173 ~~~d~Y~VLGL~~~a~~s~~eIKkAYRkLalk~HPDK~~~~~---k~~AeekFq~I~eAYevLsDp~k 237 (237)
...+||.++|.....++..+-+.--|.-..+++|||+..... ...|.+....|++||.+|.||++
T Consensus 6 ~~~~ff~~Fg~e~~~~~~p~~l~~~~~~~skkL~~d~~~~~~~~~~d~a~eqSa~lnkAY~TLk~pL~ 73 (168)
T KOG3192|consen 6 SPSRFFDIFGMELSFKIDPDKLKEKYTDISKKLHPDRPGLSFAGDTDQASEQSAELNKAYDTLKDPLA 73 (168)
T ss_pred hHHHHHHHhccccCCCCCcchhhHHHHHHHHhhCcccccccccccchhHHHHHHHHHHHHHHHHhHHH
Confidence 446899999999999888888888999999999999954321 23688889999999999999973
No 70
>COG1076 DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones]
Probab=95.75 E-value=0.0053 Score=52.33 Aligned_cols=61 Identities=28% Similarity=0.378 Sum_probs=50.9
Q ss_pred ccccccCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCc---HHHHHHHHHHHHHHHHHhcccC
Q 026520 176 SDRTILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQGSS---QAMAEEKFKLCLNAYKSLCAAL 236 (237)
Q Consensus 176 d~Y~VLGL~~~a~~s~~eIKkAYRkLalk~HPDK~~~~~---k~~AeekFq~I~eAYevLsDp~ 236 (237)
+++.++|+++...+..+.++..|+.++..+|||+....+ +..+-+.+..++.||.+|.||+
T Consensus 2 ~~~~~~~~~~~f~~~~~~l~~~~~~~~~~~~~dr~~~~~~~~~~~~l~~~~~~~~a~~tLk~~l 65 (174)
T COG1076 2 DGFVLFGLPRAFQIDLDALKLQYRELQRAYHPDRFGKASEAEQRKALQQSAEVNPAYQTLKDPL 65 (174)
T ss_pred CcccccccHHHHHHHHhHhhhhHHHHHHhhCcccccccchHHHHHHHHHHHHhcchHHHHHHHH
Confidence 456677787777777888999999999999999987654 4446778999999999999885
No 71
>PF03656 Pam16: Pam16; InterPro: IPR005341 The Pam16 protein is the fifth essential subunit of the pre-sequence translocase-associated protein import motor (PAM) []. In Saccharomyces cerevisiae (Baker's yeast), Pam16 is required for preprotein translocation into the matrix, but not for protein insertion into the inner membrane [].; PDB: 2GUZ_J.
Probab=91.47 E-value=0.23 Score=41.09 Aligned_cols=55 Identities=13% Similarity=0.074 Sum_probs=37.0
Q ss_pred CCCccccccccCcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHHHHHhc
Q 026520 171 TVGSSSDRTILGLPPSGPLKLDDVKNAFRLSALKWHPDKHQGSSQAMAEEKFKLCLNAYKSLC 233 (237)
Q Consensus 171 ~~~~~d~Y~VLGL~~~a~~s~~eIKkAYRkLalk~HPDK~~~~~k~~AeekFq~I~eAYevLs 233 (237)
.|....+..||||++.. +.++|.+.|..|-...+|++.+. ...=..|..|.+.|.
T Consensus 54 ~Mtl~EA~~ILnv~~~~--~~eeI~k~y~~Lf~~Nd~~kGGS------fYLQSKV~rAKErl~ 108 (127)
T PF03656_consen 54 GMTLDEARQILNVKEEL--SREEIQKRYKHLFKANDPSKGGS------FYLQSKVFRAKERLE 108 (127)
T ss_dssp ---HHHHHHHHT--G----SHHHHHHHHHHHHHHT-CCCTS-------HHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHcCCCCcc--CHHHHHHHHHHHHhccCCCcCCC------HHHHHHHHHHHHHHH
Confidence 45667899999999977 99999999999999999997654 233345666666664
No 72
>PF13446 RPT: A repeated domain in UCH-protein
Probab=87.61 E-value=0.8 Score=32.45 Aligned_cols=29 Identities=21% Similarity=0.203 Sum_probs=25.9
Q ss_pred CccccccccCcCCCCCCCHHHHHHHHHHHHH
Q 026520 173 GSSSDRTILGLPPSGPLKLDDVKNAFRLSAL 203 (237)
Q Consensus 173 ~~~d~Y~VLGL~~~a~~s~~eIKkAYRkLal 203 (237)
+...+|++|||+++. +.+.|-.+|.....
T Consensus 3 ~~~~Ay~~Lgi~~~~--~Dd~Ii~~f~~~~~ 31 (62)
T PF13446_consen 3 DVEEAYEILGIDEDT--DDDFIISAFQSKVN 31 (62)
T ss_pred CHHHHHHHhCcCCCC--CHHHHHHHHHHHHH
Confidence 446899999999998 99999999998877
No 73
>PF14687 DUF4460: Domain of unknown function (DUF4460)
Probab=87.58 E-value=1.5 Score=35.39 Aligned_cols=47 Identities=28% Similarity=0.303 Sum_probs=38.4
Q ss_pred CCHHHHHHHHHHHHHHhCCCCCCCC--cHHHHHHHHHHHHHHHHHhccc
Q 026520 189 LKLDDVKNAFRLSALKWHPDKHQGS--SQAMAEEKFKLCLNAYKSLCAA 235 (237)
Q Consensus 189 ~s~~eIKkAYRkLalk~HPDK~~~~--~k~~AeekFq~I~eAYevLsDp 235 (237)
++..+++.|.|..-++.|||..... .++..++-++.|+.-.+.|..+
T Consensus 6 ~~~~~l~~aLr~Fy~~VHPDlF~~~P~~k~~Ne~SLk~Ln~~Ld~l~~~ 54 (112)
T PF14687_consen 6 LSSPDLRSALRPFYFAVHPDLFGQHPEEKQVNEESLKLLNSYLDSLKKR 54 (112)
T ss_pred hhhHHHHHHHHHHHHHhCCcccccChHHHHhhHHHHHHHHHHHHHHhcc
Confidence 3678899999999999999987543 3666788899999888888753
No 74
>TIGR00714 hscB Fe-S protein assembly co-chaperone HscB. This model describes the small subunit, Hsc20 (20K heat shock cognate protein) of a pair of proteins Hsc66-Hsc20, related to the DnaK-DnaJ heat shock proteins, which also serve as molecular chaperones. Hsc20, unlike DnaJ, appears not to have chaperone activity on its own, but to act solely as a regulatory subunit for Hsc66 (i.e., to be a co-chaperone). The gene for Hsc20 in E. coli, hscB, is not induced by heat shock.
Probab=86.48 E-value=0.58 Score=39.50 Aligned_cols=23 Identities=26% Similarity=0.200 Sum_probs=19.9
Q ss_pred HHHHHHHHHHHHHHHHHhcccCC
Q 026520 215 QAMAEEKFKLCLNAYKSLCAALS 237 (237)
Q Consensus 215 k~~AeekFq~I~eAYevLsDp~k 237 (237)
+..+.+.+..|++||++|+||.+
T Consensus 32 ~~~a~~~s~~iN~AY~~L~~p~~ 54 (157)
T TIGR00714 32 QLAAVQQSTTLNQAYQTLKDPLM 54 (157)
T ss_pred hHHHHHHHHHHHHHHHHhCChhh
Confidence 35688899999999999999963
No 75
>COG2879 Uncharacterized small protein [Function unknown]
Probab=40.85 E-value=46 Score=24.75 Aligned_cols=28 Identities=36% Similarity=0.452 Sum_probs=22.7
Q ss_pred HHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHH
Q 026520 197 AFRLSALKWHPDKHQGSSQAMAEEKFKLCLNA 228 (237)
Q Consensus 197 AYRkLalk~HPDK~~~~~k~~AeekFq~I~eA 228 (237)
.|-+-+++.|||+.+-. -+|-|.++++|
T Consensus 27 nYVehmr~~hPd~p~mT----~~EFfrec~da 54 (65)
T COG2879 27 NYVEHMRKKHPDKPPMT----YEEFFRECQDA 54 (65)
T ss_pred HHHHHHHHhCcCCCccc----HHHHHHHHHHh
Confidence 57788999999998864 67788888776
No 76
>PF07709 SRR: Seven Residue Repeat; InterPro: IPR011714 This repeat is found in some Plasmodium and Theileria proteins.
Probab=38.43 E-value=19 Score=18.79 Aligned_cols=13 Identities=46% Similarity=0.685 Sum_probs=9.9
Q ss_pred HHHHHHHHHHHhc
Q 026520 221 KFKLCLNAYKSLC 233 (237)
Q Consensus 221 kFq~I~eAYevLs 233 (237)
.|..|..||+.|.
T Consensus 2 ~~~~V~~aY~~l~ 14 (14)
T PF07709_consen 2 KFEKVKNAYEQLS 14 (14)
T ss_pred cHHHHHHHHHhcC
Confidence 4778888888774
No 77
>PF12434 Malate_DH: Malate dehydrogenase enzyme
Probab=23.16 E-value=89 Score=19.63 Aligned_cols=17 Identities=29% Similarity=0.599 Sum_probs=14.4
Q ss_pred CHHHHHHHHHHHHHHhC
Q 026520 190 KLDDVKNAFRLSALKWH 206 (237)
Q Consensus 190 s~~eIKkAYRkLalk~H 206 (237)
..++.+.+.|+.||.||
T Consensus 9 ~~~~~r~~lR~AALeYH 25 (28)
T PF12434_consen 9 NKEDKRAQLRQAALEYH 25 (28)
T ss_pred chHHHHHHHHHHHHHhc
Confidence 34678889999999999
Done!