BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026522
(237 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1R2R|A Chain A, Crystal Structure Of Rabbit Muscle Triosephosphate
Isomerase
pdb|1R2R|B Chain B, Crystal Structure Of Rabbit Muscle Triosephosphate
Isomerase
pdb|1R2R|C Chain C, Crystal Structure Of Rabbit Muscle Triosephosphate
Isomerase
pdb|1R2R|D Chain D, Crystal Structure Of Rabbit Muscle Triosephosphate
Isomerase
pdb|1R2S|A Chain A, Crystal Structure Of Rabbit Muscle Triosephosphate
Isomerase
pdb|1R2S|B Chain B, Crystal Structure Of Rabbit Muscle Triosephosphate
Isomerase
pdb|1R2S|C Chain C, Crystal Structure Of Rabbit Muscle Triosephosphate
Isomerase
pdb|1R2S|D Chain D, Crystal Structure Of Rabbit Muscle Triosephosphate
Isomerase
pdb|1R2T|A Chain A, Crystal Structure Of Rabbit Muscle Triosephosphate
Isomerase
pdb|1R2T|B Chain B, Crystal Structure Of Rabbit Muscle Triosephosphate
Isomerase
Length = 248
Score = 222 bits (565), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 111/209 (53%), Positives = 138/209 (66%), Gaps = 2/209 (0%)
Query: 3 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHV 62
RKFFVGGNWK NG + + ++++ LN + ++ + L P V
Sbjct: 4 RKFFVGGNWKMNGRKKNLGELITTLNAAKVPADTEVVCAPPTA--YIDFARQKLDPKIAV 61
Query: 63 AAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGL 122
AAQNC+ GAFTGEIS M+ + WV+LGHSERR + E +E +G KVA+ALS+GL
Sbjct: 62 AAQNCYKVTNGAFTGEISPGMIKDCGATWVVLGHSERRHVFGESDELIGQKVAHALSEGL 121
Query: 123 KVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQA 182
VIAC+GE L++REAG T VV QTK IAD V WS +VLAYEPVWAIGTGK ATP QA
Sbjct: 122 GVIACIGEKLDEREAGITEKVVFEQTKVIADNVKDWSKVVLAYEPVWAIGTGKTATPQQA 181
Query: 183 QEVHFELRKWLLANTSPEIAAATRIIYGG 211
QEVH +LR WL +N S +A +TRIIYGG
Sbjct: 182 QEVHEKLRGWLKSNVSDAVAQSTRIIYGG 210
>pdb|1HTI|A Chain A, Crystal Structure Of Recombinant Human Triosephosphate
Isomerase At 2.8 Angstroms Resolution. Triosephosphate
Isomerase Related Human Genetic Disorders And Comparison
With The Trypanosomal Enzyme
pdb|1HTI|B Chain B, Crystal Structure Of Recombinant Human Triosephosphate
Isomerase At 2.8 Angstroms Resolution. Triosephosphate
Isomerase Related Human Genetic Disorders And Comparison
With The Trypanosomal Enzyme
Length = 248
Score = 220 bits (561), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 110/209 (52%), Positives = 137/209 (65%), Gaps = 2/209 (0%)
Query: 3 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHV 62
RKFFVGGNWK NG + + +++ LN + ++ + L P V
Sbjct: 4 RKFFVGGNWKMNGRKQSLGELIGTLNAAKVPADTEVVCAPPTA--YIDFARQKLDPKIAV 61
Query: 63 AAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGL 122
AAQNC+ GAFTGEIS M+ + WV+LGHSERR + E +E +G KVA+AL++GL
Sbjct: 62 AAQNCYKVTNGAFTGEISPGMIKDCGATWVVLGHSERRHVFGESDELIGQKVAHALAEGL 121
Query: 123 KVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQA 182
VIAC+GE L++REAG T VV QTK IAD V WS +VLAYEPVWAIGTGK ATP QA
Sbjct: 122 GVIACIGEKLDEREAGITEKVVFEQTKVIADNVKDWSKVVLAYEPVWAIGTGKTATPQQA 181
Query: 183 QEVHFELRKWLLANTSPEIAAATRIIYGG 211
QEVH +LR WL +N S +A +TRIIYGG
Sbjct: 182 QEVHEKLRGWLKSNVSDAVAQSTRIIYGG 210
>pdb|1SW3|A Chain A, Triosephosphate Isomerase From Gallus Gallus, Loop 6
Mutant T175v
pdb|1SW3|B Chain B, Triosephosphate Isomerase From Gallus Gallus, Loop 6
Mutant T175v
Length = 248
Score = 220 bits (561), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 112/209 (53%), Positives = 139/209 (66%), Gaps = 2/209 (0%)
Query: 3 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHV 62
RKFFVGGNWK NG + + +++ LN + +L + L V
Sbjct: 4 RKFFVGGNWKMNGDKKSLGELIHTLNGAKLSADTEVVCGAPSI--YLDFARQKLDAKIGV 61
Query: 63 AAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGL 122
AAQNC+ GAFTGEIS M+ ++ WVILGHSERR + E +E +G KVA+AL++GL
Sbjct: 62 AAQNCYKVPKGAFTGEISPAMIKDIGAAWVILGHSERRHVFGESDELIGQKVAHALAEGL 121
Query: 123 KVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQA 182
VIAC+GE L++REAG T VV QTKAIAD V WS +VLAYEPVWAIGTGKVATP QA
Sbjct: 122 GVIACIGEKLDEREAGITEKVVFEQTKAIADNVKDWSKVVLAYEPVWAIGTGKVATPQQA 181
Query: 183 QEVHFELRKWLLANTSPEIAAATRIIYGG 211
QEVH +LR WL ++ S +A +TRIIYGG
Sbjct: 182 QEVHEKLRGWLKSHVSDAVAQSTRIIYGG 210
>pdb|1WYI|A Chain A, Human Triosephosphate Isomerase Of New Crystal Form
pdb|1WYI|B Chain B, Human Triosephosphate Isomerase Of New Crystal Form
pdb|2JK2|A Chain A, Structural Basis Of Human Triosephosphate Isomerase
Deficiency. Crystal Structure Of The Wild Type Enzyme.
pdb|2JK2|B Chain B, Structural Basis Of Human Triosephosphate Isomerase
Deficiency. Crystal Structure Of The Wild Type Enzyme
Length = 250
Score = 220 bits (561), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 110/209 (52%), Positives = 137/209 (65%), Gaps = 2/209 (0%)
Query: 3 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHV 62
RKFFVGGNWK NG + + +++ LN + ++ + L P V
Sbjct: 6 RKFFVGGNWKMNGRKQSLGELIGTLNAAKVPADTEVVCAPPTA--YIDFARQKLDPKIAV 63
Query: 63 AAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGL 122
AAQNC+ GAFTGEIS M+ + WV+LGHSERR + E +E +G KVA+AL++GL
Sbjct: 64 AAQNCYKVTNGAFTGEISPGMIKDCGATWVVLGHSERRHVFGESDELIGQKVAHALAEGL 123
Query: 123 KVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQA 182
VIAC+GE L++REAG T VV QTK IAD V WS +VLAYEPVWAIGTGK ATP QA
Sbjct: 124 GVIACIGEKLDEREAGITEKVVFEQTKVIADNVKDWSKVVLAYEPVWAIGTGKTATPQQA 183
Query: 183 QEVHFELRKWLLANTSPEIAAATRIIYGG 211
QEVH +LR WL +N S +A +TRIIYGG
Sbjct: 184 QEVHEKLRGWLKSNVSDAVAQSTRIIYGG 212
>pdb|2VOM|A Chain A, Structural Basis Of Human Triosephosphate Isomerase
Deficiency. Mutation E104d And Correlation To Solvent
Perturbation.
pdb|2VOM|B Chain B, Structural Basis Of Human Triosephosphate Isomerase
Deficiency. Mutation E104d And Correlation To Solvent
Perturbation.
pdb|2VOM|C Chain C, Structural Basis Of Human Triosephosphate Isomerase
Deficiency. Mutation E104d And Correlation To Solvent
Perturbation.
pdb|2VOM|D Chain D, Structural Basis Of Human Triosephosphate Isomerase
Deficiency. Mutation E104d And Correlation To Solvent
Perturbation
Length = 250
Score = 219 bits (558), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 109/209 (52%), Positives = 137/209 (65%), Gaps = 2/209 (0%)
Query: 3 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHV 62
RKFFVGGNWK NG + + +++ LN + ++ + L P V
Sbjct: 6 RKFFVGGNWKMNGRKQSLGELIGTLNAAKVPADTEVVCAPPTA--YIDFARQKLDPKIAV 63
Query: 63 AAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGL 122
AAQNC+ GAFTGEIS M+ + WV+LGHSERR + + +E +G KVA+AL++GL
Sbjct: 64 AAQNCYKVTNGAFTGEISPGMIKDCGATWVVLGHSERRHVFGDSDELIGQKVAHALAEGL 123
Query: 123 KVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQA 182
VIAC+GE L++REAG T VV QTK IAD V WS +VLAYEPVWAIGTGK ATP QA
Sbjct: 124 GVIACIGEKLDEREAGITEKVVFEQTKVIADNVKDWSKVVLAYEPVWAIGTGKTATPQQA 183
Query: 183 QEVHFELRKWLLANTSPEIAAATRIIYGG 211
QEVH +LR WL +N S +A +TRIIYGG
Sbjct: 184 QEVHEKLRGWLKSNVSDAVAQSTRIIYGG 212
>pdb|1TPH|1 Chain 1, 1.8 Angstroms Crystal Structure Of Wild Type Chicken
Triosephosphate Isomerase-Phosphoglycolohydroxamate
Complex
pdb|1TPH|2 Chain 2, 1.8 Angstroms Crystal Structure Of Wild Type Chicken
Triosephosphate Isomerase-Phosphoglycolohydroxamate
Complex
pdb|8TIM|A Chain A, Triose Phosphate Isomerase
pdb|8TIM|B Chain B, Triose Phosphate Isomerase
Length = 247
Score = 218 bits (555), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 111/209 (53%), Positives = 137/209 (65%), Gaps = 2/209 (0%)
Query: 3 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHV 62
RKFFVGGNWK NG + + +++ LN + +L + L V
Sbjct: 3 RKFFVGGNWKMNGDKKSLGELIHTLNGAKLSADTEVVCGAPSI--YLDFARQKLDAKIGV 60
Query: 63 AAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGL 122
AAQNC+ GAFTGEIS M+ ++ WVILGHSERR + E +E +G KVA+AL++GL
Sbjct: 61 AAQNCYKVPKGAFTGEISPAMIKDIGAAWVILGHSERRHVFGESDELIGQKVAHALAEGL 120
Query: 123 KVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQA 182
VIAC+GE L++REAG T VV QTKAIAD V WS +VLAYEPVWAIGTGK ATP QA
Sbjct: 121 GVIACIGEKLDEREAGITEKVVFEQTKAIADNVKDWSKVVLAYEPVWAIGTGKTATPQQA 180
Query: 183 QEVHFELRKWLLANTSPEIAAATRIIYGG 211
QEVH +LR WL + S +A +TRIIYGG
Sbjct: 181 QEVHEKLRGWLKTHVSDAVAQSTRIIYGG 209
>pdb|1TPB|1 Chain 1, Offset Of A Catalytic Lesion By A Bound Water Soluble
pdb|1TPB|2 Chain 2, Offset Of A Catalytic Lesion By A Bound Water Soluble
Length = 247
Score = 217 bits (552), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 110/209 (52%), Positives = 137/209 (65%), Gaps = 2/209 (0%)
Query: 3 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHV 62
RKFFVGGNWK NG + + +++ LN + +L + L V
Sbjct: 3 RKFFVGGNWKMNGDKKSLGELIHTLNGAKLSADTEVVCGAPSI--YLDFARQKLDAKIGV 60
Query: 63 AAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGL 122
AAQNC+ GAFTGEIS M+ ++ WVILGHSERR + E +E +G KVA+AL++GL
Sbjct: 61 AAQNCYKVPKGAFTGEISPAMIKDIGAAWVILGHSERRHVFGESDELIGQKVAHALAEGL 120
Query: 123 KVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQA 182
VIAC+GE L++REAG T VV QTKAIAD V WS +VLAY+PVWAIGTGK ATP QA
Sbjct: 121 GVIACIGEKLDEREAGITEKVVFEQTKAIADNVKDWSKVVLAYDPVWAIGTGKTATPQQA 180
Query: 183 QEVHFELRKWLLANTSPEIAAATRIIYGG 211
QEVH +LR WL + S +A +TRIIYGG
Sbjct: 181 QEVHEKLRGWLKTHVSDAVAQSTRIIYGG 209
>pdb|1SPQ|A Chain A, Understanding Protein Lids: Structural Analysis Of Active
Hinge Mutants In Triosephosphate Isomerase
pdb|1SPQ|B Chain B, Understanding Protein Lids: Structural Analysis Of Active
Hinge Mutants In Triosephosphate Isomerase
Length = 247
Score = 216 bits (551), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 110/209 (52%), Positives = 137/209 (65%), Gaps = 2/209 (0%)
Query: 3 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHV 62
RKFFVGGNWK NG + + +++ LN + +L + L V
Sbjct: 3 RKFFVGGNWKMNGDKKSLGELIHTLNGAKLSADTEVVCGAPSI--YLDFARQKLDAKIGV 60
Query: 63 AAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGL 122
AAQNC+ GAFTGEIS M+ ++ WVILGHSERR + E +E +G KVA+AL++GL
Sbjct: 61 AAQNCYKVPKGAFTGEISPAMIKDIGAAWVILGHSERRHVFGESDELIGQKVAHALAEGL 120
Query: 123 KVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQA 182
VIAC+GE L++REAG T VV QTKAIAD V WS +VLAYEPVWAIGTGK TP QA
Sbjct: 121 GVIACIGEKLDEREAGITEKVVFEQTKAIADNVKDWSKVVLAYEPVWAIGTGKTKTPQQA 180
Query: 183 QEVHFELRKWLLANTSPEIAAATRIIYGG 211
QEVH +LR WL ++ S +A +TRIIYGG
Sbjct: 181 QEVHEKLRGWLKSHVSDAVAQSTRIIYGG 209
>pdb|2I9E|A Chain A, Structure Of Triosephosphate Isomerase Of Tenebrio Molitor
pdb|2I9E|B Chain B, Structure Of Triosephosphate Isomerase Of Tenebrio Molitor
pdb|2I9E|C Chain C, Structure Of Triosephosphate Isomerase Of Tenebrio Molitor
pdb|2I9E|D Chain D, Structure Of Triosephosphate Isomerase Of Tenebrio Molitor
Length = 259
Score = 216 bits (550), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 109/211 (51%), Positives = 139/211 (65%), Gaps = 2/211 (0%)
Query: 1 MGRKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGF 60
M RKF VGGNWK NG +++ +I+ L G +L LV++ +
Sbjct: 1 MARKFVVGGNWKMNGDKKQINEIIGFLKSGPLNQDTEVVVGVPAI--YLELVRTCVPASI 58
Query: 61 HVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQ 120
VAAQNC+ GAFTGEIS M+ ++ WVILGHSERR I E +E + +KV +AL
Sbjct: 59 GVAAQNCYKVPKGAFTGEISPAMIKDVGADWVILGHSERRQIFGESDELIAEKVCHALES 118
Query: 121 GLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPA 180
GLKVIAC+GETLE+REAG T +VV QTKAIA +V+ WSN+V+AYEPVWAIGTGK ATP
Sbjct: 119 GLKVIACIGETLEEREAGKTEEVVFRQTKAIAAKVNDWSNVVIAYEPVWAIGTGKTATPQ 178
Query: 181 QAQEVHFELRKWLLANTSPEIAAATRIIYGG 211
QAQ+VH LR+W+ N ++ + RI YGG
Sbjct: 179 QAQDVHKALRQWICENIDAKVGNSIRIQYGG 209
>pdb|1TPW|A Chain A, Triosephosphate Isomerase Drinks Water To Keep Healthy
pdb|1TPW|B Chain B, Triosephosphate Isomerase Drinks Water To Keep Healthy
Length = 247
Score = 216 bits (549), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 110/209 (52%), Positives = 136/209 (65%), Gaps = 2/209 (0%)
Query: 3 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHV 62
RKFFVGGNWK NG + + +++ LN + +L + L V
Sbjct: 3 RKFFVGGNWKMNGDKKSLGELIHTLNGAKLSADTEVVCGAPSI--YLDFARQKLDAKIGV 60
Query: 63 AAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGL 122
AAQNC+ GAFTGEIS M+ ++ WVILGH ERR + E +E +G KVA+AL++GL
Sbjct: 61 AAQNCYKVPKGAFTGEISPAMIKDIGAAWVILGHPERRHVFGESDELIGQKVAHALAEGL 120
Query: 123 KVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQA 182
VIAC+GE L++REAG T VV QTKAIAD V WS +VLAYEPVWAIGTGK ATP QA
Sbjct: 121 GVIACIGEKLDEREAGITEKVVFEQTKAIADNVKDWSKVVLAYEPVWAIGTGKTATPQQA 180
Query: 183 QEVHFELRKWLLANTSPEIAAATRIIYGG 211
QEVH +LR WL + S +A +TRIIYGG
Sbjct: 181 QEVHEKLRGWLKTHVSDAVAQSTRIIYGG 209
>pdb|1TPC|1 Chain 1, Offset Of A Catalytic Lesion By A Bound Water Soluble
pdb|1TPC|2 Chain 2, Offset Of A Catalytic Lesion By A Bound Water Soluble
Length = 247
Score = 215 bits (547), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 109/209 (52%), Positives = 136/209 (65%), Gaps = 2/209 (0%)
Query: 3 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHV 62
RKFFVGGNWK NG + + +++ LN + +L + L V
Sbjct: 3 RKFFVGGNWKMNGDKKSLGELIHTLNGAKLSADTEVVCGAPSI--YLDFARQKLDAKIGV 60
Query: 63 AAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGL 122
AAQNC+ GAFTGEIS M+ ++ WVILGH ERR + E +E +G KVA+AL++GL
Sbjct: 61 AAQNCYKVPKGAFTGEISPAMIKDIGAAWVILGHPERRHVFGESDELIGQKVAHALAEGL 120
Query: 123 KVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQA 182
VIAC+GE L++REAG T VV QTKAIAD V WS +VLAY+PVWAIGTGK ATP QA
Sbjct: 121 GVIACIGEKLDEREAGITEKVVFEQTKAIADNVKDWSKVVLAYDPVWAIGTGKTATPQQA 180
Query: 183 QEVHFELRKWLLANTSPEIAAATRIIYGG 211
QEVH +LR WL + S +A +TRIIYGG
Sbjct: 181 QEVHEKLRGWLKTHVSDAVAQSTRIIYGG 209
>pdb|1TPU|A Chain A, S96p Change Is A Second-Site Suppressor For H95n Sluggish
Mutant Triosephosphate Isomerase
pdb|1TPU|B Chain B, S96p Change Is A Second-Site Suppressor For H95n Sluggish
Mutant Triosephosphate Isomerase
Length = 247
Score = 215 bits (547), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 110/209 (52%), Positives = 137/209 (65%), Gaps = 2/209 (0%)
Query: 3 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHV 62
RKFFVGGNWK NG + + +++ LN + +L + L V
Sbjct: 3 RKFFVGGNWKMNGDKKSLGELIHTLNGAKLSADTEVVCGAPSI--YLDFARQKLDAKIGV 60
Query: 63 AAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGL 122
AAQNC+ GAFTGEIS M+ ++ WVILG+SERR + E +E +G KVA+AL++GL
Sbjct: 61 AAQNCYKVPKGAFTGEISPAMIKDIGAAWVILGNSERRHVFGESDELIGQKVAHALAEGL 120
Query: 123 KVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQA 182
VIAC+GE L++REAG T VV QTKAIAD V WS +VLAYEPVWAIGTGK ATP QA
Sbjct: 121 GVIACIGEKLDEREAGITEKVVFEQTKAIADNVKDWSKVVLAYEPVWAIGTGKTATPQQA 180
Query: 183 QEVHFELRKWLLANTSPEIAAATRIIYGG 211
QEVH +LR WL + S +A +TRIIYGG
Sbjct: 181 QEVHEKLRGWLKTHVSDAVAQSTRIIYGG 209
>pdb|1SW7|A Chain A, Triosephosphate Isomerase From Gallus Gallus, Loop 6
Mutant K174n, T175s, A176s
pdb|1SW7|B Chain B, Triosephosphate Isomerase From Gallus Gallus, Loop 6
Mutant K174n, T175s, A176s
Length = 248
Score = 215 bits (547), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 109/209 (52%), Positives = 137/209 (65%), Gaps = 2/209 (0%)
Query: 3 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHV 62
RKFFVGGNWK NG + + +++ LN + +L + L V
Sbjct: 4 RKFFVGGNWKMNGDKKSLGELIHTLNGAKLSADTEVVCGAPSI--YLDFARQKLDAKIGV 61
Query: 63 AAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGL 122
AAQNC+ GAFTGEIS M+ ++ WVILGHSERR + E +E +G KVA+AL++GL
Sbjct: 62 AAQNCYKVPKGAFTGEISPAMIKDIGAAWVILGHSERRHVFGESDELIGQKVAHALAEGL 121
Query: 123 KVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQA 182
VIAC+GE L++REAG T VV QTKAIAD V WS +VLAYEPVWAIGTG +TP QA
Sbjct: 122 GVIACIGEKLDEREAGITEKVVFEQTKAIADNVKDWSKVVLAYEPVWAIGTGNSSTPQQA 181
Query: 183 QEVHFELRKWLLANTSPEIAAATRIIYGG 211
QEVH +LR WL ++ S +A +TRIIYGG
Sbjct: 182 QEVHEKLRGWLKSHVSDAVAQSTRIIYGG 210
>pdb|1SQ7|A Chain A, Understanding Protein Lids: Structural Analysis Of Active
Hinge Mutants In Triosephosphate Isomerase
pdb|1SQ7|B Chain B, Understanding Protein Lids: Structural Analysis Of Active
Hinge Mutants In Triosephosphate Isomerase
Length = 247
Score = 213 bits (543), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 110/209 (52%), Positives = 137/209 (65%), Gaps = 2/209 (0%)
Query: 3 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHV 62
RKFFVGGNWK NG + + +++ LN + +L + L V
Sbjct: 3 RKFFVGGNWKMNGDKKSLGELIHTLNGAKLSADTEVVCGAPSI--YLDFARQKLDAKIGV 60
Query: 63 AAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGL 122
AAQNC+ GAFTGEIS M+ ++ WVILGHSERR + E +E +G KVA+AL++GL
Sbjct: 61 AAQNCYKVPKGAFTGEISPAMIKDIGAAWVILGHSERRHVFGESDELIGQKVAHALAEGL 120
Query: 123 KVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQA 182
VIAC+GE L++REAG T VV QTKAIAD V WS +VLAYEPVWAIGTG ATP QA
Sbjct: 121 GVIACIGEKLDEREAGITEKVVFEQTKAIADNVKDWSKVVLAYEPVWAIGTGLWATPQQA 180
Query: 183 QEVHFELRKWLLANTSPEIAAATRIIYGG 211
QEVH +LR WL ++ S +A +TRIIYGG
Sbjct: 181 QEVHEKLRGWLKSHVSDAVAQSTRIIYGG 209
>pdb|1SW0|A Chain A, Triosephosphate Isomerase From Gallus Gallus, Loop 6 Hinge
Mutant K174l, T175w
pdb|1SW0|B Chain B, Triosephosphate Isomerase From Gallus Gallus, Loop 6 Hinge
Mutant K174l, T175w
Length = 248
Score = 213 bits (543), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 110/209 (52%), Positives = 137/209 (65%), Gaps = 2/209 (0%)
Query: 3 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHV 62
RKFFVGGNWK NG + + +++ LN + +L + L V
Sbjct: 4 RKFFVGGNWKMNGDKKSLGELIHTLNGAKLSADTEVVCGAPSI--YLDFARQKLDAKIGV 61
Query: 63 AAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGL 122
AAQNC+ GAFTGEIS M+ ++ WVILGHSERR + E +E +G KVA+AL++GL
Sbjct: 62 AAQNCYKVPKGAFTGEISPAMIKDIGAAWVILGHSERRHVFGESDELIGQKVAHALAEGL 121
Query: 123 KVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQA 182
VIAC+GE L++REAG T VV QTKAIAD V WS +VLAYEPVWAIGTG ATP QA
Sbjct: 122 GVIACIGEKLDEREAGITEKVVFEQTKAIADNVKDWSKVVLAYEPVWAIGTGLWATPQQA 181
Query: 183 QEVHFELRKWLLANTSPEIAAATRIIYGG 211
QEVH +LR WL ++ S +A +TRIIYGG
Sbjct: 182 QEVHEKLRGWLKSHVSDAVAQSTRIIYGG 210
>pdb|1SU5|A Chain A, Understanding Protein Lids: Structural Analysis Of Active
Hinge Mutants In Triosephosphate Isomerase
pdb|1SU5|B Chain B, Understanding Protein Lids: Structural Analysis Of Active
Hinge Mutants In Triosephosphate Isomerase
Length = 247
Score = 213 bits (543), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 109/209 (52%), Positives = 136/209 (65%), Gaps = 2/209 (0%)
Query: 3 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHV 62
RKFFVGGNWK NG + + +++ LN + +L + L V
Sbjct: 3 RKFFVGGNWKMNGDKKSLGELIHTLNGAKLSADTEVVCGAPSI--YLDFARQKLDAKIGV 60
Query: 63 AAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGL 122
AAQNC+ GAFTGEIS M+ ++ WVILGHSERR + E +E +G KVA+AL++GL
Sbjct: 61 AAQNCYKVPKGAFTGEISPAMIKDIGAAWVILGHSERRHVFGESDELIGQKVAHALAEGL 120
Query: 123 KVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQA 182
VIAC+GE L++REAG T VV QTKAIAD V WS +VLAYEPVWAIGTG TP QA
Sbjct: 121 GVIACIGEKLDEREAGITEKVVFEQTKAIADNVKDWSKVVLAYEPVWAIGTGNPNTPQQA 180
Query: 183 QEVHFELRKWLLANTSPEIAAATRIIYGG 211
QEVH +LR WL ++ S +A +TRIIYGG
Sbjct: 181 QEVHEKLRGWLKSHVSDAVAQSTRIIYGG 209
>pdb|1SSD|A Chain A, Understanding Protein Lids: Structural Analysis Of Active
Hinge Mutants In Triosephosphate Isomerase
pdb|1SSD|B Chain B, Understanding Protein Lids: Structural Analysis Of Active
Hinge Mutants In Triosephosphate Isomerase
pdb|1SSG|A Chain A, Understanding Protein Lids: Structural Analysis Of Active
Hinge Mutants In Triosephosphate Isomerase
pdb|1SSG|B Chain B, Understanding Protein Lids: Structural Analysis Of Active
Hinge Mutants In Triosephosphate Isomerase
Length = 247
Score = 213 bits (542), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 109/209 (52%), Positives = 136/209 (65%), Gaps = 2/209 (0%)
Query: 3 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHV 62
RKFFVGGNWK NG + + +++ LN + +L + L V
Sbjct: 3 RKFFVGGNWKMNGDKKSLGELIHTLNGAKLSADTEVVCGAPSI--YLDFARQKLDAKIGV 60
Query: 63 AAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGL 122
AAQNC+ GAFTGEIS M+ ++ WVILGHSERR + E +E +G KVA+AL++GL
Sbjct: 61 AAQNCYKVPKGAFTGEISPAMIKDIGAAWVILGHSERRHVFGESDELIGQKVAHALAEGL 120
Query: 123 KVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQA 182
VIAC+GE L++REAG T VV QTKAIAD V WS +VLAYEPVWAIGTG TP QA
Sbjct: 121 GVIACIGEKLDEREAGITEKVVFEQTKAIADNVKDWSKVVLAYEPVWAIGTGYSLTPQQA 180
Query: 183 QEVHFELRKWLLANTSPEIAAATRIIYGG 211
QEVH +LR WL ++ S +A +TRIIYGG
Sbjct: 181 QEVHEKLRGWLKSHVSDAVAQSTRIIYGG 209
>pdb|1TPV|A Chain A, S96p Change Is A Second-Site Suppressor For H95n Sluggish
Mutant Triosephosphate Isomerase
pdb|1TPV|B Chain B, S96p Change Is A Second-Site Suppressor For H95n Sluggish
Mutant Triosephosphate Isomerase
Length = 247
Score = 213 bits (541), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 109/209 (52%), Positives = 136/209 (65%), Gaps = 2/209 (0%)
Query: 3 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHV 62
RKFFVGGNWK NG + + +++ LN + +L + L V
Sbjct: 3 RKFFVGGNWKMNGDKKSLGELIHTLNGAKLSADTEVVCGAPSI--YLDFARQKLDAKIGV 60
Query: 63 AAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGL 122
AAQNC+ GAFTGEIS M+ ++ WVILG+ ERR + E +E +G KVA+AL++GL
Sbjct: 61 AAQNCYKVPKGAFTGEISPAMIKDIGAAWVILGNPERRHVFGESDELIGQKVAHALAEGL 120
Query: 123 KVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQA 182
VIAC+GE L++REAG T VV QTKAIAD V WS +VLAYEPVWAIGTGK ATP QA
Sbjct: 121 GVIACIGEKLDEREAGITEKVVFEQTKAIADNVKDWSKVVLAYEPVWAIGTGKTATPQQA 180
Query: 183 QEVHFELRKWLLANTSPEIAAATRIIYGG 211
QEVH +LR WL + S +A +TRIIYGG
Sbjct: 181 QEVHEKLRGWLKTHVSDAVAQSTRIIYGG 209
>pdb|1TIM|A Chain A, Structure Of Triose Phosphate Isomerase From Chicken
Muscle
pdb|1TIM|B Chain B, Structure Of Triose Phosphate Isomerase From Chicken
Muscle
Length = 247
Score = 213 bits (541), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 108/209 (51%), Positives = 136/209 (65%), Gaps = 2/209 (0%)
Query: 3 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHV 62
RKFFVGGNWK NG + + +++ L+ + +L + L V
Sbjct: 3 RKFFVGGNWKMNGKRKSLGELIHTLDGAKLSADTEVVCGAPSI--YLDFARQKLDAKIGV 60
Query: 63 AAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGL 122
AAQNC+ GAFTGEIS M+ ++ WVILGHSERR + E +E +G KVA+AL++GL
Sbjct: 61 AAQNCYKVPKGAFTGEISPAMIKDIGAAWVILGHSERRHVFGESDELIGQKVAHALAEGL 120
Query: 123 KVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQA 182
VIAC+GE L++REAG T VV +TKAIAD V WS +VLAYEPVWAIGTGK ATP QA
Sbjct: 121 GVIACIGEKLDEREAGITEKVVFQETKAIADNVKDWSKVVLAYEPVWAIGTGKTATPQQA 180
Query: 183 QEVHFELRKWLLANTSPEIAAATRIIYGG 211
QEVH +LR WL + S +A +RIIYGG
Sbjct: 181 QEVHEKLRGWLKTHVSDAVAVQSRIIYGG 209
>pdb|1MO0|A Chain A, Structural Genomics Of Caenorhabditis Elegans: Triose
Phosphate Isomerase
pdb|1MO0|B Chain B, Structural Genomics Of Caenorhabditis Elegans: Triose
Phosphate Isomerase
Length = 275
Score = 205 bits (522), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 108/211 (51%), Positives = 132/211 (62%), Gaps = 2/211 (0%)
Query: 1 MGRKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGF 60
+ RKFFVGGNWK NG V IV+ LN +L KS L+ G
Sbjct: 21 LTRKFFVGGNWKMNGDYASVDGIVTFLN--ASADNSSVDVVVAPPAPYLAYAKSKLKAGV 78
Query: 61 HVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQ 120
VAAQNC+ GAFTGEIS M+ +L + WVILGHSERR + E + + +K +AL
Sbjct: 79 LVAAQNCYKVPKGAFTGEISPAMIKDLGLEWVILGHSERRHVFGESDALIAEKTVHALEA 138
Query: 121 GLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPA 180
G+KV+ C+GE LE+REAG T DV Q +AI D+ SW NIV+AYEPVWAIGTGK A+
Sbjct: 139 GIKVVFCIGEKLEEREAGHTKDVNFRQLQAIVDKGVSWENIVIAYEPVWAIGTGKTASGE 198
Query: 181 QAQEVHFELRKWLLANTSPEIAAATRIIYGG 211
QAQEVH +R +L SP +A ATRIIYGG
Sbjct: 199 QAQEVHEWIRAFLKEKVSPAVADATRIIYGG 229
>pdb|1QDS|A Chain A, Superstable E65q Mutant Of Leishmania Mexicana
Triosephosphate Isomerase (Tim)
pdb|1IF2|A Chain A, X-Ray Structure Of Leishmania Mexicana Triosephosphate
Isomerase Complexed With Ipp
pdb|1N55|A Chain A, 0.83a Resolution Structure Of The E65q Mutant Of
Leishmania Mexicana Triosephosphate Isomerase Complexed
With 2-Phosphoglycolate
pdb|2VXN|A Chain A, E65q-Tim Complexed With Phosphoglycolohydroxamate At 0.82
A Resolution
pdb|2Y61|A Chain A, Crystal Structure Of Leishmanial E65q-Tim Complexed With
S-Glycidol Phosphate
pdb|2Y62|A Chain A, Crystal Structure Of Leishmanial E65q-Tim Complexed With
R-Glycidol Phosphate
pdb|2Y63|A Chain A, Crystal Structure Of Leishmanial E65q-Tim Complexed With
Bromohydroxyacetone Phosphate
Length = 251
Score = 197 bits (501), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 106/211 (50%), Positives = 137/211 (64%), Gaps = 7/211 (3%)
Query: 8 GGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLR-PGFHVAAQN 66
NWKCNGT ++K+V V NE + LV++ LR P + ++AQN
Sbjct: 10 AANWKCNGTTASIEKLVQVFNE--HTISHDVQCVVAPTFVHIPLVQAKLRNPKYVISAQN 67
Query: 67 CWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIA 126
+ K GAFTGE+S +L ++ + WVILGHSERR E +E V KV+ A QG VIA
Sbjct: 68 A-IAKSGAFTGEVSMPILKDIGVHWVILGHSERRTYYGETDEIVAQKVSEACKQGFMVIA 126
Query: 127 CVGETLEQREAGSTMDVVAAQTKAIADRVS--SWSNIVLAYEPVWAIGTGKVATPAQAQE 184
C+GETL+QREA T VV +QT AIA +++ +W+ +VLAYEPVWAIGTGKVATP QAQE
Sbjct: 127 CIGETLQQREANQTAKVVLSQTSAIAAKLTKDAWNQVVLAYEPVWAIGTGKVATPEQAQE 186
Query: 185 VHFELRKWLLANTSPEIAAATRIIYGGISIN 215
VH LRKW+ N ++AA RI+YGG S+N
Sbjct: 187 VHLLLRKWVSENIGTDVAAKLRILYGG-SVN 216
>pdb|3TH6|A Chain A, Crystal Structure Of Triosephosphate Isomerase From
Rhipicephalus (Boophilus) Microplus.
pdb|3TH6|B Chain B, Crystal Structure Of Triosephosphate Isomerase From
Rhipicephalus (Boophilus) Microplus
Length = 249
Score = 196 bits (498), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 102/213 (47%), Positives = 131/213 (61%), Gaps = 3/213 (1%)
Query: 3 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHV 62
R+F VGGNWK +G+ ++ I + L +L +S L P +
Sbjct: 4 RRFCVGGNWKMHGSKNSIRDICNTLKGASLDPNVEVIVACPAP--YLDYCRSLLPPSVAL 61
Query: 63 AAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGL 122
AAQNC+ + GAFTGEIS M+ + WVILGHSERR + E + +G+K+ +AL GL
Sbjct: 62 AAQNCYKVEQGAFTGEISPGMIKDCGGQWVILGHSERRHVFKEDDVLIGEKIKHALESGL 121
Query: 123 KVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQA 182
VIAC+GE LE REAG T +V Q K IA V WS +V+AYEPVWAIGTGK ATP QA
Sbjct: 122 NVIACIGELLEDREAGRTEEVCFRQIKHIASNVKDWSKVVIAYEPVWAIGTGKTATPDQA 181
Query: 183 QEVHFELRKWLLANTSPEIAAATRIIYGGISIN 215
QEVH ++R WL N S ++A+ RI YGG S+N
Sbjct: 182 QEVHSKVRNWLSTNVSADVASKVRIQYGG-SVN 213
>pdb|1AMK|A Chain A, Leishmania Mexicana Triose Phosphate Isomerase
Length = 251
Score = 196 bits (497), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 105/211 (49%), Positives = 137/211 (64%), Gaps = 7/211 (3%)
Query: 8 GGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLR-PGFHVAAQN 66
NWKCNGT ++K+V V NE + LV++ LR P + ++A+N
Sbjct: 10 AANWKCNGTTASIEKLVQVFNE--HTISHDVQCVVAPTFVHIPLVQAKLRNPKYVISAEN 67
Query: 67 CWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIA 126
+ K GAFTGE+S +L ++ + WVILGHSERR E +E V KV+ A QG VIA
Sbjct: 68 A-IAKSGAFTGEVSMPILKDIGVHWVILGHSERRTYYGETDEIVAQKVSEACKQGFMVIA 126
Query: 127 CVGETLEQREAGSTMDVVAAQTKAIADRVS--SWSNIVLAYEPVWAIGTGKVATPAQAQE 184
C+GETL+QREA T VV +QT AIA +++ +W+ +VLAYEPVWAIGTGKVATP QAQE
Sbjct: 127 CIGETLQQREANQTAKVVLSQTSAIAAKLTKDAWNQVVLAYEPVWAIGTGKVATPEQAQE 186
Query: 185 VHFELRKWLLANTSPEIAAATRIIYGGISIN 215
VH LRKW+ N ++AA RI+YGG S+N
Sbjct: 187 VHLLLRKWVSENIGTDVAAKLRILYGG-SVN 216
>pdb|1M6J|A Chain A, Crystal Structure Of Triosephosphate Isomerase From
Entamoeba Histolytica
pdb|1M6J|B Chain B, Crystal Structure Of Triosephosphate Isomerase From
Entamoeba Histolytica
Length = 261
Score = 193 bits (490), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 110/220 (50%), Positives = 137/220 (62%), Gaps = 10/220 (4%)
Query: 4 KFFVGGNWKCNGTPEEVKKIVS-VLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLR----- 57
KF VGGNWKCNGT ++ + V ++ V+ L
Sbjct: 5 KFVVGGNWKCNGTLASIETLTKGVAASVDAELAKKVEVIVGVPFIYIPKVQQILAGEANG 64
Query: 58 PGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYA 117
V+A+N W K GA+TGE+ MLV+ ++P+VILGHSERR I +E NE V +KV A
Sbjct: 65 ANILVSAENAWTK-SGAYTGEVHVGMLVDCQVPYVILGHSERRQIFHESNEQVAEKVKVA 123
Query: 118 LSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVS--SWSNIVLAYEPVWAIGTGK 175
+ GLKVIAC+GET QR A T +VVAAQ KAI + +S +W NI+LAYEPVWAIGTGK
Sbjct: 124 IDAGLKVIACIGETEAQRIANQTEEVVAAQLKAINNAISKEAWKNIILAYEPVWAIGTGK 183
Query: 176 VATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGISIN 215
ATP QAQEVH +RKW+ N S E+A ATRI YGG S+N
Sbjct: 184 TATPDQAQEVHQYIRKWMTENISKEVAEATRIQYGG-SVN 222
>pdb|1YPI|A Chain A, Structure Of Yeast Triosephosphate Isomerase At 1.9-
Angstroms Resolution
pdb|1YPI|B Chain B, Structure Of Yeast Triosephosphate Isomerase At 1.9-
Angstroms Resolution
pdb|2YPI|A Chain A, Crystallographic Analysis Of The Complex Between
Triosephosphate Isomerase And 2-Phosphoglycolate At 2.5-
Angstroms Resolution. Implications For Catalysis
pdb|2YPI|B Chain B, Crystallographic Analysis Of The Complex Between
Triosephosphate Isomerase And 2-Phosphoglycolate At 2.5-
Angstroms Resolution. Implications For Catalysis
pdb|7TIM|A Chain A, Structure Of The Triosephosphate Isomerase-
Phosphoglycolohydroxamate Complex: An Analogue Of The
Intermediate On The Reaction Pathway
pdb|7TIM|B Chain B, Structure Of The Triosephosphate Isomerase-
Phosphoglycolohydroxamate Complex: An Analogue Of The
Intermediate On The Reaction Pathway
Length = 247
Score = 188 bits (478), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 95/211 (45%), Positives = 132/211 (62%), Gaps = 5/211 (2%)
Query: 3 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXX--XXXXXXXFLGLVKSSLRPGF 60
R FFVGGN+K NG+ + +K+IV LN + LVK +P
Sbjct: 2 RTFFVGGNFKLNGSKQSIKEIVERLNTASIPENVEVVICPPATYLDYSVSLVK---KPQV 58
Query: 61 HVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQ 120
V AQN ++K GAFTGE S + + ++ WVILGHSERR +E ++F+ DK +AL Q
Sbjct: 59 TVGAQNAYLKASGAFTGENSVDQIKDVGAKWVILGHSERRSYFHEDDKFIADKTKFALGQ 118
Query: 121 GLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPA 180
G+ VI C+GETLE+++AG T+DVV Q A+ + V W+N+V+AYEPVWAIGTG ATP
Sbjct: 119 GVGVILCIGETLEEKKAGKTLDVVERQLNAVLEEVKDWTNVVVAYEPVWAIGTGLAATPE 178
Query: 181 QAQEVHFELRKWLLANTSPEIAAATRIIYGG 211
AQ++H +RK+L + + A+ RI+YGG
Sbjct: 179 DAQDIHASIRKFLASKLGDKAASELRILYGG 209
>pdb|4FF7|A Chain A, Structure Of C126s Mutant Of Saccharomyces Cerevisiae
Triosephosphate Isomerase
pdb|4FF7|B Chain B, Structure Of C126s Mutant Of Saccharomyces Cerevisiae
Triosephosphate Isomerase
Length = 248
Score = 187 bits (475), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 95/213 (44%), Positives = 132/213 (61%), Gaps = 5/213 (2%)
Query: 1 MGRKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXX--XXXXXXXFLGLVKSSLRP 58
M R FFVGGN+K NG+ + +K+IV LN + LVK +P
Sbjct: 1 MARTFFVGGNFKLNGSKQSIKEIVERLNTASIPENVEVVICPPATYLDYSVSLVK---KP 57
Query: 59 GFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYAL 118
V AQN ++K GAFTGE S + + ++ WVILGHSERR +E ++F+ DK +AL
Sbjct: 58 QVTVGAQNAYLKASGAFTGENSVDQIKDVGAKWVILGHSERRSYFHEDDKFIADKTKFAL 117
Query: 119 SQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVAT 178
QG+ VI +GETLE+++AG T+DVV Q A+ + V W+N+V+AYEPVWAIGTG AT
Sbjct: 118 GQGVGVILSIGETLEEKKAGKTLDVVERQLNAVLEEVKDWTNVVVAYEPVWAIGTGLAAT 177
Query: 179 PAQAQEVHFELRKWLLANTSPEIAAATRIIYGG 211
P AQ++H +RK+L + + A+ RI+YGG
Sbjct: 178 PEDAQDIHASIRKFLASKLGDKAASELRILYGG 210
>pdb|3YPI|A Chain A, Electrophilic Catalysis In Triosephosphase Isomerase: The
Role Of Histidine-95
pdb|3YPI|B Chain B, Electrophilic Catalysis In Triosephosphase Isomerase: The
Role Of Histidine-95
Length = 247
Score = 185 bits (470), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 94/211 (44%), Positives = 131/211 (62%), Gaps = 5/211 (2%)
Query: 3 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXX--XXXXXXXFLGLVKSSLRPGF 60
R FFVGGN+K NG+ + +K+IV LN + LVK +P
Sbjct: 2 RTFFVGGNFKLNGSKQSIKEIVERLNTASIPENVEVVICPPATYLDYSVSLVK---KPQV 58
Query: 61 HVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQ 120
V AQN ++K GAFTGE S + + ++ WVILG SERR +E ++F+ DK +AL Q
Sbjct: 59 TVGAQNAYLKASGAFTGENSVDQIKDVGAKWVILGQSERRSYFHEDDKFIADKTKFALGQ 118
Query: 121 GLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPA 180
G+ VI C+GETLE+++AG T+DVV Q A+ + V W+N+V+AYEPVWAIGTG ATP
Sbjct: 119 GVGVILCIGETLEEKKAGKTLDVVERQLNAVLEEVKDWTNVVVAYEPVWAIGTGLAATPE 178
Query: 181 QAQEVHFELRKWLLANTSPEIAAATRIIYGG 211
AQ++H +RK+L + + A+ RI+YGG
Sbjct: 179 DAQDIHASIRKFLASKLGDKAASELRILYGG 209
>pdb|2OMA|A Chain A, Crystallographic Analysis Of A Chemically Modified
Triosephosphate Isomerase From Trypanosoma Cruzi With
Dithiobenzylamine (dtba)
pdb|2OMA|B Chain B, Crystallographic Analysis Of A Chemically Modified
Triosephosphate Isomerase From Trypanosoma Cruzi With
Dithiobenzylamine (dtba)
Length = 250
Score = 184 bits (466), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 100/209 (47%), Positives = 128/209 (61%), Gaps = 10/209 (4%)
Query: 8 GGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLR---PGFHVAA 64
NWKCNG+ + ++ LN FL + + R P F +AA
Sbjct: 9 AANWKCNGSESLLVPLIETLN----AATFDHDVQCVVAPTFLHIPMTKARLTNPKFQIAA 64
Query: 65 QNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKV 124
QN + + GAFTGE+S ++L + I WV+LGHSERRL E NE V +KVA A + G V
Sbjct: 65 QNA-ITRSGAFTGEVSLQILKDYGISWVVLGHSERRLYYGETNEIVAEKVAQAXAAGFHV 123
Query: 125 IACVGETLEQREAGSTMDVVAAQTKAIADRVS--SWSNIVLAYEPVWAIGTGKVATPAQA 182
I CVGET E+REAG T VV Q A+A ++S +WS +V+AYEPVWAIGTGKVATP QA
Sbjct: 124 IVCVGETNEEREAGRTAAVVLTQLAAVAQKLSKEAWSRVVIAYEPVWAIGTGKVATPQQA 183
Query: 183 QEVHFELRKWLLANTSPEIAAATRIIYGG 211
QEVH LR+W+ + +IAA RI+YGG
Sbjct: 184 QEVHELLRRWVRSKLGTDIAAQLRILYGG 212
>pdb|1CI1|A Chain A, Crystal Structure Of Triosephosphate Isomerase From
Trypanosoma Cruzi In Hexane
pdb|1CI1|B Chain B, Crystal Structure Of Triosephosphate Isomerase From
Trypanosoma Cruzi In Hexane
pdb|1SUX|A Chain A, Crystallographic Analysis Of The Complex Between
Triosephosphate Isomerase From Trypanosoma Cruzi And
3-(2- Benzothiazolylthio)-1-propanesulfonic Acid
pdb|1SUX|B Chain B, Crystallographic Analysis Of The Complex Between
Triosephosphate Isomerase From Trypanosoma Cruzi And
3-(2- Benzothiazolylthio)-1-propanesulfonic Acid
Length = 251
Score = 183 bits (465), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 100/209 (47%), Positives = 128/209 (61%), Gaps = 10/209 (4%)
Query: 8 GGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLR---PGFHVAA 64
NWKCNG+ + ++ LN FL + + R P F +AA
Sbjct: 10 AANWKCNGSESLLVPLIETLNAA----TFDHDVQCVVAPTFLHIPMTKARLTNPKFQIAA 65
Query: 65 QNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKV 124
QN + + GAFTGE+S ++L + I WV+LGHSERRL E NE V +KVA A + G V
Sbjct: 66 QNA-ITRSGAFTGEVSLQILKDYGISWVVLGHSERRLYYGETNEIVAEKVAQACAAGFHV 124
Query: 125 IACVGETLEQREAGSTMDVVAAQTKAIADRVS--SWSNIVLAYEPVWAIGTGKVATPAQA 182
I CVGET E+REAG T VV Q A+A ++S +WS +V+AYEPVWAIGTGKVATP QA
Sbjct: 125 IVCVGETNEEREAGRTAAVVLTQLAAVAQKLSKEAWSRVVIAYEPVWAIGTGKVATPQQA 184
Query: 183 QEVHFELRKWLLANTSPEIAAATRIIYGG 211
QEVH LR+W+ + +IAA RI+YGG
Sbjct: 185 QEVHELLRRWVRSKLGTDIAAQLRILYGG 213
>pdb|1TCD|A Chain A, Trypanosoma Cruzi Triosephosphate Isomerase
pdb|1TCD|B Chain B, Trypanosoma Cruzi Triosephosphate Isomerase
Length = 249
Score = 183 bits (465), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 100/209 (47%), Positives = 128/209 (61%), Gaps = 10/209 (4%)
Query: 8 GGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLR---PGFHVAA 64
NWKCNG+ + ++ LN FL + + R P F +AA
Sbjct: 8 AANWKCNGSESLLVPLIETLN----AATFDHDVQCVVAPTFLHIPMTKARLTNPKFQIAA 63
Query: 65 QNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKV 124
QN + + GAFTGE+S ++L + I WV+LGHSERRL E NE V +KVA A + G V
Sbjct: 64 QNA-ITRSGAFTGEVSLQILKDYGISWVVLGHSERRLYYGETNEIVAEKVAQACAAGFHV 122
Query: 125 IACVGETLEQREAGSTMDVVAAQTKAIADRVS--SWSNIVLAYEPVWAIGTGKVATPAQA 182
I CVGET E+REAG T VV Q A+A ++S +WS +V+AYEPVWAIGTGKVATP QA
Sbjct: 123 IVCVGETNEEREAGRTAAVVLTQLAAVAQKLSKEAWSRVVIAYEPVWAIGTGKVATPQQA 182
Query: 183 QEVHFELRKWLLANTSPEIAAATRIIYGG 211
QEVH LR+W+ + +IAA RI+YGG
Sbjct: 183 QEVHELLRRWVRSKLGTDIAAQLRILYGG 211
>pdb|1I45|A Chain A, Yeast Triosephosphate Isomerase (Mutant)
pdb|1I45|B Chain B, Yeast Triosephosphate Isomerase (Mutant)
Length = 248
Score = 182 bits (463), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 93/213 (43%), Positives = 132/213 (61%), Gaps = 5/213 (2%)
Query: 1 MGRKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXX--XXXXXXXFLGLVKSSLRP 58
M R FFVGGN+K NG+ + +K+IV LN + LVK +P
Sbjct: 1 MARTFFVGGNFKLNGSKQSIKEIVERLNTASIPENVEVVICPPATYLDYSVSLVK---KP 57
Query: 59 GFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYAL 118
V AQN ++K GAFTGE S + + ++ +VILGHSERR +E ++F+ DK +AL
Sbjct: 58 QVTVGAQNAYLKASGAFTGENSVDQIKDVGAKYVILGHSERRSYFHEDDKFIADKTKFAL 117
Query: 119 SQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVAT 178
QG+ VI C+GETLE+++AG T+DVV Q A+ + V ++N+V+AYEPV AIGTG AT
Sbjct: 118 GQGVGVILCIGETLEEKKAGKTLDVVERQLNAVLEEVKDFTNVVVAYEPVXAIGTGLAAT 177
Query: 179 PAQAQEVHFELRKWLLANTSPEIAAATRIIYGG 211
P AQ++H +RK+L + + A+ RI+YGG
Sbjct: 178 PEDAQDIHASIRKFLASKLGDKAASELRILYGG 210
>pdb|3KRS|A Chain A, Structure Of Triosephosphate Isomerase From
Cryptosporidium Parvum At 1.55a Resolution
pdb|3KRS|B Chain B, Structure Of Triosephosphate Isomerase From
Cryptosporidium Parvum At 1.55a Resolution
Length = 271
Score = 182 bits (461), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 90/213 (42%), Positives = 132/213 (61%), Gaps = 3/213 (1%)
Query: 1 MGRKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPG- 59
M RK+FVGGN+KCNGT E +K ++ + + + + PG
Sbjct: 22 MSRKYFVGGNFKCNGTKESLKTLIDSFKQVESSNSEVYVFPTSLHISLVKEFFGNDHPGV 81
Query: 60 FHVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALS 119
F + +QN GAFTGE+S EML ++++ ++GHSERR +E ++ V +KV L
Sbjct: 82 FKIGSQNISCTGNGAFTGEVSCEMLKDMDVDCSLVGHSERRQYYSETDQIVNNKVKKGLE 141
Query: 120 QGLKVIACVGETLEQREAGSTMDVVAAQ-TKAIADRVSSWSNIVLAYEPVWAIGTGKVAT 178
GLK++ C+GE+L +RE G T DV+ Q T+A+ D VS SN+V+AYEP+WAIGTG VAT
Sbjct: 142 NGLKIVLCIGESLSERETGKTNDVIQKQLTEALKD-VSDLSNLVIAYEPIWAIGTGVVAT 200
Query: 179 PAQAQEVHFELRKWLLANTSPEIAAATRIIYGG 211
P QAQE H +R+++ +P++++ RIIYGG
Sbjct: 201 PGQAQEAHAFIREYVTRMYNPQVSSNLRIIYGG 233
>pdb|1NF0|A Chain A, Triosephosphate Isomerase In Complex With Dhap
pdb|1NF0|B Chain B, Triosephosphate Isomerase In Complex With Dhap
pdb|1NEY|A Chain A, Triosephosphate Isomerase In Complex With Dhap
pdb|1NEY|B Chain B, Triosephosphate Isomerase In Complex With Dhap
Length = 247
Score = 180 bits (457), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 92/211 (43%), Positives = 131/211 (62%), Gaps = 5/211 (2%)
Query: 3 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXX--XXXXXXXFLGLVKSSLRPGF 60
R FFVGGN+K NG+ + +K+IV LN + LVK +P
Sbjct: 2 RTFFVGGNFKLNGSKQSIKEIVERLNTASIPENVEVVICPPATYLDYSVSLVK---KPQV 58
Query: 61 HVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQ 120
V AQN ++K GAFTGE S + + ++ +VILGHSERR +E ++F+ DK +AL Q
Sbjct: 59 TVGAQNAYLKASGAFTGENSVDQIKDVGAKYVILGHSERRSYFHEDDKFIADKTKFALGQ 118
Query: 121 GLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPA 180
G+ VI C+GETLE+++AG T+DVV Q A+ + V ++N+V+AYEPV AIGTG ATP
Sbjct: 119 GVGVILCIGETLEEKKAGKTLDVVERQLNAVLEEVKDFTNVVVAYEPVXAIGTGLAATPE 178
Query: 181 QAQEVHFELRKWLLANTSPEIAAATRIIYGG 211
AQ++H +RK+L + + A+ RI+YGG
Sbjct: 179 DAQDIHASIRKFLASKLGDKAASELRILYGG 209
>pdb|2VFD|A Chain A, Crystal Structure Of The F96s Mutant Of Plasmodium
Falciparum Triosephosphate Isomerase
pdb|2VFD|B Chain B, Crystal Structure Of The F96s Mutant Of Plasmodium
Falciparum Triosephosphate Isomerase
pdb|2VFE|A Chain A, Crystal Structure Of F96s Mutant Of Plasmodium Falciparum
Triosephosphate Isomerase With 3-Phosphoglycerate Bound
At The Dimer Interface
pdb|2VFE|B Chain B, Crystal Structure Of F96s Mutant Of Plasmodium Falciparum
Triosephosphate Isomerase With 3-Phosphoglycerate Bound
At The Dimer Interface
Length = 248
Score = 173 bits (439), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 88/215 (40%), Positives = 123/215 (57%), Gaps = 2/215 (0%)
Query: 1 MGRKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGF 60
M RK+FV NWKCNGT E +K + + N + + L+ F
Sbjct: 1 MARKYFVAANWKCNGTLESIKSLTNSFNNLDFDPSKLDVVVFPVSVHY-DHTRKLLQSKF 59
Query: 61 HVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQ 120
QN G++TGE+SAE+ +L I +VI+GHSERR +E +E V +K+ +L
Sbjct: 60 STGIQNVSKFGNGSYTGEVSAEIAKDLNIEYVIIGHSERRKYFHETDEDVREKLQASLKN 119
Query: 121 GLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPA 180
LK + C GE+LEQRE T++V+ Q KA D + ++ N++L YEP+WAIGTGK ATP
Sbjct: 120 NLKAVVCFGESLEQREQNKTIEVITKQVKAFVDLIDNFDNVILVYEPLWAIGTGKTATPE 179
Query: 181 QAQEVHFELRKWLLANTSPEIAAATRIIYGGISIN 215
QAQ VH E+RK + + A RI+YGG S+N
Sbjct: 180 QAQLVHKEIRKIVKDTCGEKQANQIRILYGG-SVN 213
>pdb|3Q37|A Chain A, Identification Of Amino Acids That Account For Long-Range
Interactions In Proteins Using Two Triosephosphate
Isomerases From Pathogenic Trypanosomes.
pdb|3Q37|B Chain B, Identification Of Amino Acids That Account For Long-Range
Interactions In Proteins Using Two Triosephosphate
Isomerases From Pathogenic Trypanosomes.
pdb|3Q37|C Chain C, Identification Of Amino Acids That Account For Long-Range
Interactions In Proteins Using Two Triosephosphate
Isomerases From Pathogenic Trypanosomes.
pdb|3Q37|D Chain D, Identification Of Amino Acids That Account For Long-Range
Interactions In Proteins Using Two Triosephosphate
Isomerases From Pathogenic Trypanosomes
Length = 251
Score = 172 bits (437), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 99/209 (47%), Positives = 130/209 (62%), Gaps = 10/209 (4%)
Query: 8 GGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLR---PGFHVAA 64
NWKCNG+ + + +++ + N FL + + R P F +AA
Sbjct: 10 AANWKCNGSQQSLSELIDLFNS----TSINHDVQCVVAPTFLHIPMTKARLTNPKFQIAA 65
Query: 65 QNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKV 124
QN + + GAFTGE+S ++L + I WV+LGHSERR E NE V DKVA A++ G V
Sbjct: 66 QNA-ITRSGAFTGEVSLQILKDYGISWVVLGHSERRAYYGETNEIVADKVAAAVASGFHV 124
Query: 125 IACVGETLEQREAGSTMDVVAAQTKAIADRVS--SWSNIVLAYEPVWAIGTGKVATPAQA 182
I CVGET E+REAG T VV Q A+A ++S +WS +V+AYEPVWAIGTGKVATP QA
Sbjct: 125 IVCVGETNEEREAGRTAAVVLTQLAAVAQKLSKEAWSRVVIAYEPVWAIGTGKVATPQQA 184
Query: 183 QEVHFELRKWLLANTSPEIAAATRIIYGG 211
QEVH LR+W+ + +IAA RI+YGG
Sbjct: 185 QEVHELLRRWVRSKLGTDIAAQLRILYGG 213
>pdb|2VFF|A Chain A, Crystal Structure Of The F96h Mutant Of Plasmodium
Falciparum Triosephosphate Isomerase
pdb|2VFF|B Chain B, Crystal Structure Of The F96h Mutant Of Plasmodium
Falciparum Triosephosphate Isomerase
pdb|2VFG|A Chain A, Crystal Structure Of The F96h Mutant Of Plasmodium
Falciparum Triosephosphate Isomerase With 3-
Phosphoglycerate Bound At The Dimer Interface
pdb|2VFG|B Chain B, Crystal Structure Of The F96h Mutant Of Plasmodium
Falciparum Triosephosphate Isomerase With 3-
Phosphoglycerate Bound At The Dimer Interface
pdb|2VFG|C Chain C, Crystal Structure Of The F96h Mutant Of Plasmodium
Falciparum Triosephosphate Isomerase With 3-
Phosphoglycerate Bound At The Dimer Interface
pdb|2VFG|D Chain D, Crystal Structure Of The F96h Mutant Of Plasmodium
Falciparum Triosephosphate Isomerase With 3-
Phosphoglycerate Bound At The Dimer Interface
Length = 248
Score = 171 bits (434), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 87/215 (40%), Positives = 122/215 (56%), Gaps = 2/215 (0%)
Query: 1 MGRKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGF 60
M RK+FV NWKCNGT E +K + + N + + L+ F
Sbjct: 1 MARKYFVAANWKCNGTLESIKSLTNSFNNLDFDPSKLDVVVFPVSVHY-DHTRKLLQSKF 59
Query: 61 HVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQ 120
QN G++TGE+SAE+ +L I +VI+GH ERR +E +E V +K+ +L
Sbjct: 60 STGIQNVSKFGNGSYTGEVSAEIAKDLNIEYVIIGHHERRKYFHETDEDVREKLQASLKN 119
Query: 121 GLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPA 180
LK + C GE+LEQRE T++V+ Q KA D + ++ N++L YEP+WAIGTGK ATP
Sbjct: 120 NLKAVVCFGESLEQREQNKTIEVITKQVKAFVDLIDNFDNVILVYEPLWAIGTGKTATPE 179
Query: 181 QAQEVHFELRKWLLANTSPEIAAATRIIYGGISIN 215
QAQ VH E+RK + + A RI+YGG S+N
Sbjct: 180 QAQLVHKEIRKIVKDTCGEKQANQIRILYGG-SVN 213
>pdb|1YDV|A Chain A, Triosephosphate Isomerase (Tim)
pdb|1YDV|B Chain B, Triosephosphate Isomerase (Tim)
pdb|1M7O|A Chain A, Plasmodium Falciparum Triosephosphate Isomerase (Pftim)
Compled To Substrate Analog 3-Phosphoglycerate (3pg)
pdb|1M7O|B Chain B, Plasmodium Falciparum Triosephosphate Isomerase (Pftim)
Compled To Substrate Analog 3-Phosphoglycerate (3pg)
pdb|1M7P|A Chain A, Plasmodium Falciparum Triosephosphate Isomerase (Pftim)
Compled To Substrate Analog Glycerol-3-Phosphate (G3p).
pdb|1M7P|B Chain B, Plasmodium Falciparum Triosephosphate Isomerase (Pftim)
Compled To Substrate Analog Glycerol-3-Phosphate (G3p).
pdb|1LYX|A Chain A, Plasmodium Falciparum Triosephosphate Isomerase (Pftim)-
Phosphoglycolate Complex
pdb|1LZO|A Chain A, Plasmodium Falciparum Triosephosphate Isomerase-
Phosphoglycolate Complex
pdb|1LZO|B Chain B, Plasmodium Falciparum Triosephosphate Isomerase-
Phosphoglycolate Complex
pdb|1LZO|C Chain C, Plasmodium Falciparum Triosephosphate Isomerase-
Phosphoglycolate Complex
pdb|1LZO|D Chain D, Plasmodium Falciparum Triosephosphate Isomerase-
Phosphoglycolate Complex
pdb|1O5X|A Chain A, Plasmodium Falciparum Tim Complexed To 2-Phosphoglycerate
pdb|1O5X|B Chain B, Plasmodium Falciparum Tim Complexed To 2-Phosphoglycerate
pdb|2VFI|A Chain A, Crystal Structure Of The Plasmodium Falciparum
Triosephosphate Isomerase In The Loop Closed State With
3- Phosphoglycerate Bound At The Active Site And
Interface
pdb|2VFI|B Chain B, Crystal Structure Of The Plasmodium Falciparum
Triosephosphate Isomerase In The Loop Closed State With
3- Phosphoglycerate Bound At The Active Site And
Interface
Length = 248
Score = 171 bits (432), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 87/215 (40%), Positives = 122/215 (56%), Gaps = 2/215 (0%)
Query: 1 MGRKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGF 60
M RK+FV NWKCNGT E +K + + N + + L+ F
Sbjct: 1 MARKYFVAANWKCNGTLESIKSLTNSFNNLDFDPSKLDVVVFPVSVHY-DHTRKLLQSKF 59
Query: 61 HVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQ 120
QN G++TGE+SAE+ +L I +VI+GH ERR +E +E V +K+ +L
Sbjct: 60 STGIQNVSKFGNGSYTGEVSAEIAKDLNIEYVIIGHFERRKYFHETDEDVREKLQASLKN 119
Query: 121 GLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPA 180
LK + C GE+LEQRE T++V+ Q KA D + ++ N++L YEP+WAIGTGK ATP
Sbjct: 120 NLKAVVCFGESLEQREQNKTIEVITKQVKAFVDLIDNFDNVILVYEPLWAIGTGKTATPE 179
Query: 181 QAQEVHFELRKWLLANTSPEIAAATRIIYGGISIN 215
QAQ VH E+RK + + A RI+YGG S+N
Sbjct: 180 QAQLVHKEIRKIVKDTCGEKQANQIRILYGG-SVN 213
>pdb|3PSV|A Chain A, Structure Of E97d Mutant Of Tim From Plasmodium Falciparum
pdb|3PSV|B Chain B, Structure Of E97d Mutant Of Tim From Plasmodium Falciparum
Length = 248
Score = 170 bits (430), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 86/215 (40%), Positives = 122/215 (56%), Gaps = 2/215 (0%)
Query: 1 MGRKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGF 60
M RK+FV NWKCNGT E +K + + N + + L+ F
Sbjct: 1 MARKYFVAANWKCNGTLESIKSLTNSFNNLDFDPSKLDVVVFPVSVHY-DHTRKLLQSKF 59
Query: 61 HVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQ 120
QN G++TGE+SAE+ +L I +VI+GH +RR +E +E V +K+ +L
Sbjct: 60 STGIQNVSKFGNGSYTGEVSAEIAKDLNIEYVIIGHFDRRKYFHETDEDVREKLQASLKN 119
Query: 121 GLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPA 180
LK + C GE+LEQRE T++V+ Q KA D + ++ N++L YEP+WAIGTGK ATP
Sbjct: 120 NLKAVVCFGESLEQREQNKTIEVITKQVKAFVDLIDNFDNVILVYEPLWAIGTGKTATPE 179
Query: 181 QAQEVHFELRKWLLANTSPEIAAATRIIYGGISIN 215
QAQ VH E+RK + + A RI+YGG S+N
Sbjct: 180 QAQLVHKEIRKIVKDTCGEKQANQIRILYGG-SVN 213
>pdb|3PSW|A Chain A, Structure Of E97q Mutant Of Tim From Plasmodium Falciparum
pdb|3PSW|B Chain B, Structure Of E97q Mutant Of Tim From Plasmodium Falciparum
Length = 248
Score = 169 bits (429), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 86/215 (40%), Positives = 122/215 (56%), Gaps = 2/215 (0%)
Query: 1 MGRKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGF 60
M RK+FV NWKCNGT E +K + + N + + L+ F
Sbjct: 1 MARKYFVAANWKCNGTLESIKSLTNSFNNLDFDPSKLDVVVFPVSVHY-DHTRKLLQSKF 59
Query: 61 HVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQ 120
QN G++TGE+SAE+ +L I +VI+GH +RR +E +E V +K+ +L
Sbjct: 60 STGIQNVSKFGNGSYTGEVSAEIAKDLNIEYVIIGHFQRRKYFHETDEDVREKLQASLKN 119
Query: 121 GLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPA 180
LK + C GE+LEQRE T++V+ Q KA D + ++ N++L YEP+WAIGTGK ATP
Sbjct: 120 NLKAVVCFGESLEQREQNKTIEVITKQVKAFVDLIDNFDNVILVYEPLWAIGTGKTATPE 179
Query: 181 QAQEVHFELRKWLLANTSPEIAAATRIIYGGISIN 215
QAQ VH E+RK + + A RI+YGG S+N
Sbjct: 180 QAQLVHKEIRKIVKDTCGEKQANQIRILYGG-SVN 213
>pdb|2VFH|A Chain A, Crystal Structure Of The F96w Mutant Of Plasmodium
Falciparum Triosephosphate Isomerase Complexed With 3-
Phosphoglycerate
pdb|2VFH|B Chain B, Crystal Structure Of The F96w Mutant Of Plasmodium
Falciparum Triosephosphate Isomerase Complexed With 3-
Phosphoglycerate
Length = 248
Score = 169 bits (428), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 87/215 (40%), Positives = 122/215 (56%), Gaps = 2/215 (0%)
Query: 1 MGRKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGF 60
M RK+FV NWKCNGT E +K + + N + + L+ F
Sbjct: 1 MARKYFVAANWKCNGTLESIKSLTNSFNNLDFDPSKLDVVVFPVSVHY-DHTRKLLQSKF 59
Query: 61 HVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQ 120
QN G++TGE+SAE+ +L I +VI+GH ERR +E +E V +K+ +L
Sbjct: 60 STGIQNVSKFGNGSYTGEVSAEIAKDLNIEYVIIGHWERRKYFHETDEDVREKLQASLKN 119
Query: 121 GLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPA 180
LK + C GE+LEQRE T++V+ Q KA D + ++ N++L YEP+WAIGTGK ATP
Sbjct: 120 NLKAVVCFGESLEQREQNKTIEVITKQVKAFVDLIDNFDNVILVYEPLWAIGTGKTATPE 179
Query: 181 QAQEVHFELRKWLLANTSPEIAAATRIIYGGISIN 215
QAQ VH E+RK + + A RI+YGG S+N
Sbjct: 180 QAQLVHKEIRKIVKDTCGEKQANQIRILYGG-SVN 213
>pdb|3QSR|A Chain A, Crystal Structure Of Trichomonas Vaginalis Triosephosphate
Isomerase Tvag_497370 Gene (Ile-45 Variant)
Length = 255
Score = 169 bits (427), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 91/212 (42%), Positives = 127/212 (59%), Gaps = 5/212 (2%)
Query: 3 RKFFVGGNWKCN-GTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFH 61
R FFVGGNWK N T EE +K++ +LN + FL ++ LR +
Sbjct: 5 RTFFVGGNWKANPKTVEEAEKLIEMLNGAKVEGNVEVVVAAPFI--FLPTLQQKLRKDWK 62
Query: 62 VAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQG 121
V+A+N + K GAFTGE++ M+ + I W ILGHSERR IL E +EF+ K +AL G
Sbjct: 63 VSAENVFTKPNGAFTGEVTVPMIKSFGIEWTILGHSERRDILKEDDEFLAAKAKFALENG 122
Query: 122 LKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSS--WSNIVLAYEPVWAIGTGKVATP 179
+K+I C GE L +REAG + V+AQ + + + + W ++V+AYEP+WAIGTGKVA+
Sbjct: 123 MKIIYCCGEHLSEREAGKASEFVSAQIEKMIPAIPAGKWDDVVIAYEPIWAIGTGKVAST 182
Query: 180 AQAQEVHFELRKWLLANTSPEIAAATRIIYGG 211
AQE+ +R L A +IA RI+YGG
Sbjct: 183 QDAQEMCKVIRDILAAKVGADIANKVRILYGG 214
>pdb|3QST|A Chain A, Crystal Structure Of Trichomonas Vaginalis Triosephosphate
Isomerase Tvag_096350 Gene (Val-45 Variant)
Length = 255
Score = 168 bits (426), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 91/212 (42%), Positives = 127/212 (59%), Gaps = 5/212 (2%)
Query: 3 RKFFVGGNWKCN-GTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFH 61
R FFVGGNWK N T +E +K+V +LN + FL ++ LR +
Sbjct: 5 RTFFVGGNWKANPKTVQEAEKLVEMLNGAKVEGNVEVVVAAPFV--FLPTLQQKLRKDWK 62
Query: 62 VAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQG 121
V+A+N + K GAFTGE++ M+ + I W ILGHSERR IL E +EF+ K +AL G
Sbjct: 63 VSAENVFTKPNGAFTGEVTVPMIKSFGIEWTILGHSERRDILKEDDEFLAAKAKFALENG 122
Query: 122 LKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSS--WSNIVLAYEPVWAIGTGKVATP 179
+K+I C GE L +REAG + V+AQ + + + + W ++V+AYEP+WAIGTGKVA+
Sbjct: 123 MKIIYCCGEHLSEREAGKASEFVSAQIEKMIPAIPAGKWDDVVIAYEPIWAIGTGKVAST 182
Query: 180 AQAQEVHFELRKWLLANTSPEIAAATRIIYGG 211
AQE+ +R L A +IA RI+YGG
Sbjct: 183 QDAQEMCKVIRDILAAKVGADIANKVRILYGG 214
>pdb|1VGA|A Chain A, Structures Of Unligated And Inhibitor Complexes Of W168f
Mutant Of Triosephosphate Isomerase From Plasmodium
Falciparum
pdb|1VGA|B Chain B, Structures Of Unligated And Inhibitor Complexes Of W168f
Mutant Of Triosephosphate Isomerase From Plasmodium
Falciparum
pdb|1VGA|C Chain C, Structures Of Unligated And Inhibitor Complexes Of W168f
Mutant Of Triosephosphate Isomerase From Plasmodium
Falciparum
pdb|1VGA|D Chain D, Structures Of Unligated And Inhibitor Complexes Of W168f
Mutant Of Triosephosphate Isomerase From Plasmodium
Falciparum
pdb|1WOA|A Chain A, Structure Of The Loop6 Hinge Mutant Of Plasmodium
Falciparum Triosephosphate Isomerase, W168f, Complexed
With Glycerol-2-Phosphate
pdb|1WOA|B Chain B, Structure Of The Loop6 Hinge Mutant Of Plasmodium
Falciparum Triosephosphate Isomerase, W168f, Complexed
With Glycerol-2-Phosphate
pdb|1WOA|C Chain C, Structure Of The Loop6 Hinge Mutant Of Plasmodium
Falciparum Triosephosphate Isomerase, W168f, Complexed
With Glycerol-2-Phosphate
pdb|1WOA|D Chain D, Structure Of The Loop6 Hinge Mutant Of Plasmodium
Falciparum Triosephosphate Isomerase, W168f, Complexed
With Glycerol-2-Phosphate
pdb|1WOB|A Chain A, Structure Of A Loop6 Hinge Mutant Of Plasmodium Falciparum
Triosephosphate Isomerase, W168f, Complexed To Sulfate
pdb|1WOB|B Chain B, Structure Of A Loop6 Hinge Mutant Of Plasmodium Falciparum
Triosephosphate Isomerase, W168f, Complexed To Sulfate
pdb|1WOB|C Chain C, Structure Of A Loop6 Hinge Mutant Of Plasmodium Falciparum
Triosephosphate Isomerase, W168f, Complexed To Sulfate
pdb|1WOB|D Chain D, Structure Of A Loop6 Hinge Mutant Of Plasmodium Falciparum
Triosephosphate Isomerase, W168f, Complexed To Sulfate
Length = 248
Score = 168 bits (425), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 86/215 (40%), Positives = 122/215 (56%), Gaps = 2/215 (0%)
Query: 1 MGRKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGF 60
M RK+FV NWKCNGT E +K + + N + + L+ F
Sbjct: 1 MARKYFVAANWKCNGTLESIKSLTNSFNNLDFDPSKLDVVVFPVSVHY-DHTRKLLQSKF 59
Query: 61 HVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQ 120
QN G++TGE+SAE+ +L I +VI+GH ERR +E +E V +K+ +L
Sbjct: 60 STGIQNVSKFGNGSYTGEVSAEIAKDLNIEYVIIGHFERRKYFHETDEDVREKLQASLKN 119
Query: 121 GLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPA 180
LK + C GE+LEQRE T++V+ Q KA D + ++ N++L YEP++AIGTGK ATP
Sbjct: 120 NLKAVVCFGESLEQREQNKTIEVITKQVKAFVDLIDNFDNVILVYEPLFAIGTGKTATPE 179
Query: 181 QAQEVHFELRKWLLANTSPEIAAATRIIYGGISIN 215
QAQ VH E+RK + + A RI+YGG S+N
Sbjct: 180 QAQLVHKEIRKIVKDTCGEKQANQIRILYGG-SVN 213
>pdb|3PWA|A Chain A, Structure Of C126a Mutant Of Plasmodium Falciparum
Triosephosphate Isomerase
pdb|3PWA|B Chain B, Structure Of C126a Mutant Of Plasmodium Falciparum
Triosephosphate Isomerase
Length = 248
Score = 167 bits (422), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 86/215 (40%), Positives = 121/215 (56%), Gaps = 2/215 (0%)
Query: 1 MGRKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGF 60
M RK+FV NWKCNGT E +K + + N + + L+ F
Sbjct: 1 MARKYFVAANWKCNGTLESIKSLTNSFNNLDFDPSKLDVVVFPVSVHY-DHTRKLLQSKF 59
Query: 61 HVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQ 120
QN G++TGE+SAE+ +L I +VI+GH ERR +E +E V +K+ +L
Sbjct: 60 STGIQNVSKFGNGSYTGEVSAEIAKDLNIEYVIIGHFERRKYFHETDEDVREKLQASLKN 119
Query: 121 GLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPA 180
LK + GE+LEQRE T++V+ Q KA D + ++ N++L YEP+WAIGTGK ATP
Sbjct: 120 NLKAVVAFGESLEQREQNKTIEVITKQVKAFVDLIDNFDNVILVYEPLWAIGTGKTATPE 179
Query: 181 QAQEVHFELRKWLLANTSPEIAAATRIIYGGISIN 215
QAQ VH E+RK + + A RI+YGG S+N
Sbjct: 180 QAQLVHKEIRKIVKDTCGEKQANQIRILYGG-SVN 213
>pdb|3PVF|A Chain A, Structure Of C126s Mutant Of Plasmodium Falciparum
Triosephosphate Isomerase Complexed With Pga
pdb|3PY2|A Chain A, Structure Of C126s Mutant Of Plasmodium Falciparum
Triosephosphate Isomerase
pdb|3PY2|B Chain B, Structure Of C126s Mutant Of Plasmodium Falciparum
Triosephosphate Isomerase
Length = 248
Score = 167 bits (422), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 86/215 (40%), Positives = 121/215 (56%), Gaps = 2/215 (0%)
Query: 1 MGRKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGF 60
M RK+FV NWKCNGT E +K + + N + + L+ F
Sbjct: 1 MARKYFVAANWKCNGTLESIKSLTNSFNNLDFDPSKLDVVVFPVSVHY-DHTRKLLQSKF 59
Query: 61 HVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQ 120
QN G++TGE+SAE+ +L I +VI+GH ERR +E +E V +K+ +L
Sbjct: 60 STGIQNVSKFGNGSYTGEVSAEIAKDLNIEYVIIGHFERRKYFHETDEDVREKLQASLKN 119
Query: 121 GLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPA 180
LK + GE+LEQRE T++V+ Q KA D + ++ N++L YEP+WAIGTGK ATP
Sbjct: 120 NLKAVVSFGESLEQREQNKTIEVITKQVKAFVDLIDNFDNVILVYEPLWAIGTGKTATPE 179
Query: 181 QAQEVHFELRKWLLANTSPEIAAATRIIYGGISIN 215
QAQ VH E+RK + + A RI+YGG S+N
Sbjct: 180 QAQLVHKEIRKIVKDTCGEKQANQIRILYGG-SVN 213
>pdb|2YC6|A Chain A, Crystal Structure Of A Triple Mutant (A198v, C202a And
C222n) Of Triosephosphate Isomerase From Giardia Lamblia
Complexed With 2-Phosphoglycolic Acid
Length = 257
Score = 164 bits (415), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 88/213 (41%), Positives = 127/213 (59%), Gaps = 5/213 (2%)
Query: 3 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHV 62
R+ F+GGN+KCNG+ + +K V+ + + + ++ + +
Sbjct: 4 RRPFIGGNFKCNGSLDFIKSHVAAIAAHKIPDSVDVVIAPSAVHLSTAIAANTSKQ-LRI 62
Query: 63 AAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGL 122
AAQN +++ GA+TGE S EML ++ + VI+GHSERR I+ E +E K AL +G+
Sbjct: 63 AAQNVYLEGNGAWTGETSVEMLQDMGLKHVIVGHSERRRIMGETDEQSAKKAKRALEKGM 122
Query: 123 KVIACVGETLEQREAGSTMDVVAAQTKAIADRVSS----WSNIVLAYEPVWAIGTGKVAT 178
VI CVGETL++R+A TM+V AQ +A+ + W +V+AYEPVW+IGTG VAT
Sbjct: 123 TVIFCVGETLDERKANRTMEVNIAQLEALGKELGESKMLWKEVVIAYEPVWSIGTGVVAT 182
Query: 179 PAQAQEVHFELRKWLLANTSPEIAAATRIIYGG 211
P QA+EVH LRKW + + E A RIIYGG
Sbjct: 183 PEQAEEVHVGLRKWFVEKVAAEGAQHIRIIYGG 215
>pdb|2DP3|A Chain A, Crystal Structure Of A Double Mutant (C202aA198V) OF
TRIOSEPHOSPHATE Isomerase From Giardia Lamblia
Length = 257
Score = 164 bits (415), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 88/213 (41%), Positives = 127/213 (59%), Gaps = 5/213 (2%)
Query: 3 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHV 62
R+ F+GGN+KCNG+ + +K V+ + + + ++ + +
Sbjct: 4 RRPFIGGNFKCNGSLDFIKSHVAAIAAHKIPDSVDVVIAPSAVHLSTAIAANTSKQ-LRI 62
Query: 63 AAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGL 122
AAQN +++ GA+TGE S EML ++ + VI+GHSERR I+ E +E K AL +G+
Sbjct: 63 AAQNVYLEGNGAWTGETSVEMLQDMGLKHVIVGHSERRRIMGETDEQSAKKAKRALEKGM 122
Query: 123 KVIACVGETLEQREAGSTMDVVAAQTKAIADRVSS----WSNIVLAYEPVWAIGTGKVAT 178
VI CVGETL++R+A TM+V AQ +A+ + W +V+AYEPVW+IGTG VAT
Sbjct: 123 TVIFCVGETLDERKANRTMEVNIAQLEALGKELGESKMLWKEVVIAYEPVWSIGTGVVAT 182
Query: 179 PAQAQEVHFELRKWLLANTSPEIAAATRIIYGG 211
P QA+EVH LRKW + + E A RIIYGG
Sbjct: 183 PEQAEEVHVGLRKWFVEKVAAEGAQHIRIIYGG 215
>pdb|2YC8|A Chain A, Crystal Structure Of A Double Mutant (C202a And C222n) Of
Triosephosphate Isomerase From Giardia Lamblia.
pdb|2YC8|B Chain B, Crystal Structure Of A Double Mutant (C202a And C222n) Of
Triosephosphate Isomerase From Giardia Lamblia.
pdb|2YC8|C Chain C, Crystal Structure Of A Double Mutant (C202a And C222n) Of
Triosephosphate Isomerase From Giardia Lamblia.
pdb|2YC8|D Chain D, Crystal Structure Of A Double Mutant (C202a And C222n) Of
Triosephosphate Isomerase From Giardia Lamblia.
pdb|2YC8|E Chain E, Crystal Structure Of A Double Mutant (C202a And C222n) Of
Triosephosphate Isomerase From Giardia Lamblia.
pdb|2YC8|F Chain F, Crystal Structure Of A Double Mutant (C202a And C222n) Of
Triosephosphate Isomerase From Giardia Lamblia.
pdb|2YC8|G Chain G, Crystal Structure Of A Double Mutant (C202a And C222n) Of
Triosephosphate Isomerase From Giardia Lamblia.
pdb|2YC8|H Chain H, Crystal Structure Of A Double Mutant (C202a And C222n) Of
Triosephosphate Isomerase From Giardia Lamblia.
pdb|2YC8|I Chain I, Crystal Structure Of A Double Mutant (C202a And C222n) Of
Triosephosphate Isomerase From Giardia Lamblia.
pdb|2YC8|J Chain J, Crystal Structure Of A Double Mutant (C202a And C222n) Of
Triosephosphate Isomerase From Giardia Lamblia.
pdb|2YC8|K Chain K, Crystal Structure Of A Double Mutant (C202a And C222n) Of
Triosephosphate Isomerase From Giardia Lamblia.
pdb|2YC8|L Chain L, Crystal Structure Of A Double Mutant (C202a And C222n) Of
Triosephosphate Isomerase From Giardia Lamblia.
pdb|2YC8|M Chain M, Crystal Structure Of A Double Mutant (C202a And C222n) Of
Triosephosphate Isomerase From Giardia Lamblia.
pdb|2YC8|N Chain N, Crystal Structure Of A Double Mutant (C202a And C222n) Of
Triosephosphate Isomerase From Giardia Lamblia.
pdb|2YC8|O Chain O, Crystal Structure Of A Double Mutant (C202a And C222n) Of
Triosephosphate Isomerase From Giardia Lamblia.
pdb|2YC8|P Chain P, Crystal Structure Of A Double Mutant (C202a And C222n) Of
Triosephosphate Isomerase From Giardia Lamblia.
pdb|2YC8|Q Chain Q, Crystal Structure Of A Double Mutant (C202a And C222n) Of
Triosephosphate Isomerase From Giardia Lamblia.
pdb|2YC8|R Chain R, Crystal Structure Of A Double Mutant (C202a And C222n) Of
Triosephosphate Isomerase From Giardia Lamblia.
pdb|2YC8|S Chain S, Crystal Structure Of A Double Mutant (C202a And C222n) Of
Triosephosphate Isomerase From Giardia Lamblia.
pdb|2YC8|T Chain T, Crystal Structure Of A Double Mutant (C202a And C222n) Of
Triosephosphate Isomerase From Giardia Lamblia
Length = 255
Score = 163 bits (413), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 88/213 (41%), Positives = 126/213 (59%), Gaps = 5/213 (2%)
Query: 3 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHV 62
R+ F+GGN+KCNG+ + +K V+ + + + ++ + +
Sbjct: 4 RRPFIGGNFKCNGSLDFIKSHVAAIAAHKIPDSVDVVIAPSAVHLSTAIAANTSKQ-LRI 62
Query: 63 AAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGL 122
AAQN +++ GA+TGE S EML ++ + VI+GHSERR I+ E +E K AL +G+
Sbjct: 63 AAQNVYLEGNGAWTGETSVEMLQDMGLKHVIVGHSERRRIMGETDEQSAKKAKRALEKGM 122
Query: 123 KVIACVGETLEQREAGSTMDVVAAQTKAIADRVSS----WSNIVLAYEPVWAIGTGKVAT 178
VI CVGETL++R+A TM+V AQ +A+ + W +V+AYEPVW+IGTG VAT
Sbjct: 123 TVIFCVGETLDERKANRTMEVNIAQLEALGKELGESKMLWKEVVIAYEPVWSIGTGVVAT 182
Query: 179 PAQAQEVHFELRKWLLANTSPEIAAATRIIYGG 211
P QA+EVH LRKW + E A RIIYGG
Sbjct: 183 PEQAEEVHVGLRKWFAEKVAAEGAQHIRIIYGG 215
>pdb|2YC7|A Chain A, Crystal Structure Of A Mutant (C202a) Of Triosephosphate
Isomerase From Giardia Lamblia Complexed With
2-Phosphoglycolic Acid
Length = 257
Score = 163 bits (413), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 88/213 (41%), Positives = 126/213 (59%), Gaps = 5/213 (2%)
Query: 3 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHV 62
R+ F+GGN+KCNG+ + +K V+ + + + ++ + +
Sbjct: 4 RRPFIGGNFKCNGSLDFIKSHVAAIAAHKIPDSVDVVIAPSAVHLSTAIAANTSKQ-LRI 62
Query: 63 AAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGL 122
AAQN +++ GA+TGE S EML ++ + VI+GHSERR I+ E +E K AL +G+
Sbjct: 63 AAQNVYLEGNGAWTGETSVEMLQDMGLKHVIVGHSERRRIMGETDEQSAKKAKRALEKGM 122
Query: 123 KVIACVGETLEQREAGSTMDVVAAQTKAIADRVSS----WSNIVLAYEPVWAIGTGKVAT 178
VI CVGETL++R+A TM+V AQ +A+ + W +V+AYEPVW+IGTG VAT
Sbjct: 123 TVIFCVGETLDERKANRTMEVNIAQLEALGKELGESKMLWKEVVIAYEPVWSIGTGVVAT 182
Query: 179 PAQAQEVHFELRKWLLANTSPEIAAATRIIYGG 211
P QA+EVH LRKW + E A RIIYGG
Sbjct: 183 PEQAEEVHVGLRKWFAEKVAAEGAQHIRIIYGG 215
>pdb|2V5B|A Chain A, The Monomerization Of Triosephosphate Isomerase From
Trypanosoma Cruzi
Length = 244
Score = 161 bits (408), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 95/212 (44%), Positives = 121/212 (57%), Gaps = 23/212 (10%)
Query: 8 GGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLR---PGFHVAA 64
NWKCNG+ + ++ LN FL + + R P F +AA
Sbjct: 10 AANWKCNGSESLLVPLIETLNAA----TFDHDVQCVVAPTFLHIPMTKARLTNPKFQIAA 65
Query: 65 QNCWVKKGGAFTGEISAEMLVNLE---IPWVILGHSERRLILNELNEFVGDKVAYALSQG 121
QN +A+ L +L+ I WV+LGHSERRL E NE V +KVA A + G
Sbjct: 66 QNAG-----------NADALASLKDYGISWVVLGHSERRLYYGETNEIVAEKVAQAXAAG 114
Query: 122 LKVIACVGETLEQREAGSTMDVVAAQTKAIADRVS--SWSNIVLAYEPVWAIGTGKVATP 179
VI CVGET E+REAG T VV Q A+A ++S +WS +V+AYEPVWAIGTGKVATP
Sbjct: 115 FHVIVCVGETNEEREAGRTAAVVLTQLAAVAQKLSKEAWSRVVIAYEPVWAIGTGKVATP 174
Query: 180 AQAQEVHFELRKWLLANTSPEIAAATRIIYGG 211
QAQEVH LR+W+ + +IAA RI+YGG
Sbjct: 175 QQAQEVHELLRRWVRSKLGTDIAAQLRILYGG 206
>pdb|3PF3|A Chain A, Crystal Structure Of A Mutant (C202a) Of Triosephosphate
Isomerase From Giardia Lamblia Derivatized With Mmts
Length = 257
Score = 159 bits (402), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 87/213 (40%), Positives = 125/213 (58%), Gaps = 5/213 (2%)
Query: 3 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHV 62
R+ F+GGN+K NG+ + +K V+ + + + ++ + +
Sbjct: 4 RRPFIGGNFKXNGSLDFIKSHVAAIAAHKIPDSVDVVIAPSAVHLSTAIAANTSKQ-LRI 62
Query: 63 AAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGL 122
AAQN +++ GA+TGE S EML ++ + VI+GHSERR I+ E +E K AL +G+
Sbjct: 63 AAQNVYLEGNGAWTGETSVEMLQDMGLKHVIVGHSERRRIMGETDEQSAKKAKRALEKGM 122
Query: 123 KVIACVGETLEQREAGSTMDVVAAQTKAIADRVSS----WSNIVLAYEPVWAIGTGKVAT 178
VI CVGETL++R+A TM+V AQ +A+ + W +V+AYEPVW+IGTG VAT
Sbjct: 123 TVIFCVGETLDERKANRTMEVNIAQLEALGKELGESKMLWKEVVIAYEPVWSIGTGVVAT 182
Query: 179 PAQAQEVHFELRKWLLANTSPEIAAATRIIYGG 211
P QA+EVH LRKW + E A RIIYGG
Sbjct: 183 PEQAEEVHVGLRKWFAEKVAAEGAQHIRIIYGG 215
>pdb|4TIM|A Chain A, Crystallographic And Molecular Modeling Studies On
Trypanosomal Triosephosphate Isomerase: A Critical
Assessment Of The Predicted And Observed Structures Of
The Complex With 2-Phosphoglycerate
pdb|4TIM|B Chain B, Crystallographic And Molecular Modeling Studies On
Trypanosomal Triosephosphate Isomerase: A Critical
Assessment Of The Predicted And Observed Structures Of
The Complex With 2-Phosphoglycerate
pdb|5TIM|A Chain A, Refined 1.83 Angstroms Structure Of Trypanosomal
Triosephosphate Isomerase, Crystallized In The Presence
Of 2.4 M-Ammonium Sulphate. A Comparison With The
Structure Of The Trypanosomal Triosephosphate
Isomerase-Glycerol-3- Phosphate Complex
pdb|5TIM|B Chain B, Refined 1.83 Angstroms Structure Of Trypanosomal
Triosephosphate Isomerase, Crystallized In The Presence
Of 2.4 M-Ammonium Sulphate. A Comparison With The
Structure Of The Trypanosomal Triosephosphate
Isomerase-Glycerol-3- Phosphate Complex
pdb|6TIM|A Chain A, The Adaptability Of The Active Site Of Trypanosomal
Triosephosphate Isomerase As Observed In The Crystal
Structures Of Three Different Complexes
pdb|6TIM|B Chain B, The Adaptability Of The Active Site Of Trypanosomal
Triosephosphate Isomerase As Observed In The Crystal
Structures Of Three Different Complexes
pdb|1TRD|A Chain A, The Influence Of Crystal Packing On Crystallographic
Binding Studies: A New Crystal Form Of Trypanosomal Tim
pdb|1TRD|B Chain B, The Influence Of Crystal Packing On Crystallographic
Binding Studies: A New Crystal Form Of Trypanosomal Tim
pdb|1TPD|A Chain A, Structures Of The "open" And "closed" State Of
Trypanosomal Triosephosphate Isomerase, As Observed In A
New Crystal Form: Implications For The Reaction
Mechanism
pdb|1TPD|B Chain B, Structures Of The "open" And "closed" State Of
Trypanosomal Triosephosphate Isomerase, As Observed In A
New Crystal Form: Implications For The Reaction
Mechanism
pdb|1TPF|A Chain A, Comparison Of The Structures And The Crystal Contacts Of
Trypanosomal Triosephosphate Isomerase In Four Different
Crystal Forms
pdb|1TPF|B Chain B, Comparison Of The Structures And The Crystal Contacts Of
Trypanosomal Triosephosphate Isomerase In Four Different
Crystal Forms
pdb|1AG1|O Chain O, Monohydrogen Phosphate Binding To Trypanosomal
Triosephosphate Isomerase
pdb|1AG1|T Chain T, Monohydrogen Phosphate Binding To Trypanosomal
Triosephosphate Isomerase
pdb|1IIG|A Chain A, Structure Of Trypanosoma Brucei Brucei Triosephosphate
Isomerase Complexed With 3-Phosphonopropionate
pdb|1IIG|B Chain B, Structure Of Trypanosoma Brucei Brucei Triosephosphate
Isomerase Complexed With 3-Phosphonopropionate
pdb|1IIH|A Chain A, Structure Of Trypanosoma Brucei Brucei Triosephosphate
Isomerase Complexed With 3-Phosphoglycerate
pdb|1IIH|B Chain B, Structure Of Trypanosoma Brucei Brucei Triosephosphate
Isomerase Complexed With 3-Phosphoglycerate
pdb|2V5L|A Chain A, Structures Of The Open And Closed State Of Trypanosomal
Triosephosphate Isomerase: As Observed In A New Crystal
Form: Implications For The Reaction Mechanism
pdb|2V5L|B Chain B, Structures Of The Open And Closed State Of Trypanosomal
Triosephosphate Isomerase: As Observed In A New Crystal
Form: Implications For The Reaction Mechanism
Length = 250
Score = 156 bits (395), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 92/209 (44%), Positives = 126/209 (60%), Gaps = 7/209 (3%)
Query: 10 NWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSL-RPGFHVAAQNCW 68
NWKCNG+ + + +++ + N L + K L P F +AAQN
Sbjct: 11 NWKCNGSQQSLSELIDLFNS--TSINHDVQCVVASTFVHLAMTKERLSHPKFVIAAQNA- 67
Query: 69 VKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACV 128
+ K GAFTGE+S +L + + W++LGHSERR E NE V DKVA A++ G VIAC+
Sbjct: 68 IAKSGAFTGEVSLPILKDFGVNWIVLGHSERRAYYGETNEIVADKVAAAVASGFMVIACI 127
Query: 129 GETLEQREAGSTMDVVAAQ--TKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVH 186
GETL++RE+G T VV Q A + + W+ +V+AYEPVWAIGTGKVATP QAQE H
Sbjct: 128 GETLQERESGRTAVVVLTQIAAIAKKLKKADWAKVVIAYEPVWAIGTGKVATPQQAQEAH 187
Query: 187 FELRKWLLANTSPEIAAATRIIYGGISIN 215
+R W+ + ++A RI+YGG S+N
Sbjct: 188 ALIRSWVSSKIGADVAGELRILYGG-SVN 215
>pdb|3TIM|A Chain A, The Crystal Structure Of The "open" And The "closed"
Conformation Of The Flexible Loop Of Trypanosomal
Triosephosphate Isomerase
pdb|3TIM|B Chain B, The Crystal Structure Of The "open" And The "closed"
Conformation Of The Flexible Loop Of Trypanosomal
Triosephosphate Isomerase
pdb|1TSI|A Chain A, Structure Of The Complex Between Trypanosomal
Triosephosphate Isomerase And N-Hydroxy-4-Phosphono-
Butanamide: Binding At The Active Site Despite An "open"
Flexible Loop
pdb|1TSI|B Chain B, Structure Of The Complex Between Trypanosomal
Triosephosphate Isomerase And N-Hydroxy-4-Phosphono-
Butanamide: Binding At The Active Site Despite An "open"
Flexible Loop
pdb|1TPE| Chain , Triosephosphate Isomerase (E.C.5.3.1.1)
pdb|1TPE|A Chain A, Comparison Of The Structures And The Crystal Contacts Of
Trypanosomal Triosephosphate Isomerase In Four Different
Crystal Forms
Length = 250
Score = 154 bits (390), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 91/209 (43%), Positives = 125/209 (59%), Gaps = 7/209 (3%)
Query: 10 NWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSL-RPGFHVAAQNCW 68
NWKCNG+ + + +++ + N L + K L P F +AAQN
Sbjct: 11 NWKCNGSQQSLSELIDLFNS--TSINHDVQCVVASTFVHLAMTKERLSHPKFVIAAQNA- 67
Query: 69 VKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACV 128
+ K GAFTGE+S +L + + W++LGHSERR E NE V DKVA A++ G VIAC+
Sbjct: 68 IAKSGAFTGEVSLPILKDFGVNWIVLGHSERRAYYGETNEIVADKVAAAVASGFMVIACI 127
Query: 129 GETLEQREAGSTMDVVAAQ--TKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVH 186
GETL++RE+G T VV Q A + + W+ +V+AYEPVWAIGTGKVATP QAQE H
Sbjct: 128 GETLQERESGRTAVVVLTQIAAIAKKLKKADWAKVVIAYEPVWAIGTGKVATPQQAQEAH 187
Query: 187 FELRKWLLANTSPEIAAATRIIYGGISIN 215
+R W+ + ++ RI+YGG S+N
Sbjct: 188 ALIRSWVSSKIGADVRGELRILYGG-SVN 215
>pdb|2V0T|A Chain A, The A178l Mutation In The C-Terminal Hinge Of The Flexible
Loop-6 Of Triosephosphate Isomerase (Tim) Induces A More
Closed Conformation Of This Hinge Region In Dimeric And
Monomeric Tim
pdb|2V0T|B Chain B, The A178l Mutation In The C-Terminal Hinge Of The Flexible
Loop-6 Of Triosephosphate Isomerase (Tim) Induces A More
Closed Conformation Of This Hinge Region In Dimeric And
Monomeric Tim
pdb|2V0T|C Chain C, The A178l Mutation In The C-Terminal Hinge Of The Flexible
Loop-6 Of Triosephosphate Isomerase (Tim) Induces A More
Closed Conformation Of This Hinge Region In Dimeric And
Monomeric Tim
pdb|2V0T|D Chain D, The A178l Mutation In The C-Terminal Hinge Of The Flexible
Loop-6 Of Triosephosphate Isomerase (Tim) Induces A More
Closed Conformation Of This Hinge Region In Dimeric And
Monomeric Tim
pdb|2V0T|E Chain E, The A178l Mutation In The C-Terminal Hinge Of The Flexible
Loop-6 Of Triosephosphate Isomerase (Tim) Induces A More
Closed Conformation Of This Hinge Region In Dimeric And
Monomeric Tim
pdb|2V0T|F Chain F, The A178l Mutation In The C-Terminal Hinge Of The Flexible
Loop-6 Of Triosephosphate Isomerase (Tim) Induces A More
Closed Conformation Of This Hinge Region In Dimeric And
Monomeric Tim
pdb|2V0T|G Chain G, The A178l Mutation In The C-Terminal Hinge Of The Flexible
Loop-6 Of Triosephosphate Isomerase (Tim) Induces A More
Closed Conformation Of This Hinge Region In Dimeric And
Monomeric Tim
pdb|2V0T|H Chain H, The A178l Mutation In The C-Terminal Hinge Of The Flexible
Loop-6 Of Triosephosphate Isomerase (Tim) Induces A More
Closed Conformation Of This Hinge Region In Dimeric And
Monomeric Tim
pdb|2V2C|A Chain A, The A178l Mutation In The C-Terminal Hinge Of The Flexible
Loop-6 Of Triosephosphate Isomerase (Tim) Induces A More
Closed Conformation Of This Hinge Region In Dimeric And
Monomeric Tim
Length = 250
Score = 154 bits (390), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 91/209 (43%), Positives = 125/209 (59%), Gaps = 7/209 (3%)
Query: 10 NWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSL-RPGFHVAAQNCW 68
NWKCNG+ + + +++ + N L + K L P F +AAQN
Sbjct: 11 NWKCNGSQQSLSELIDLFNS--TSINHDVQCVVASTFVHLAMTKERLSHPKFVIAAQNA- 67
Query: 69 VKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACV 128
+ K GAFTGE+S +L + + W++LGHSERR E NE V DKVA A++ G VIAC+
Sbjct: 68 IAKSGAFTGEVSLPILKDFGVNWIVLGHSERRAYYGETNEIVADKVAAAVASGFMVIACI 127
Query: 129 GETLEQREAGSTMDVVAAQ--TKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVH 186
GETL++RE+G T VV Q A + + W+ +V+AYEPVWAIGTGKV TP QAQE H
Sbjct: 128 GETLQERESGRTAVVVLTQIAAIAKKLKKADWAKVVIAYEPVWAIGTGKVLTPQQAQEAH 187
Query: 187 FELRKWLLANTSPEIAAATRIIYGGISIN 215
+R W+ + ++A RI+YGG S+N
Sbjct: 188 ALIRSWVSSKIGADVAGELRILYGG-SVN 215
>pdb|1KV5|A Chain A, Structure Of Trypanosoma Brucei Brucei Tim With The
Salt-Bridge- Forming Residue Arg191 Mutated To Ser
pdb|1KV5|B Chain B, Structure Of Trypanosoma Brucei Brucei Tim With The
Salt-Bridge- Forming Residue Arg191 Mutated To Ser
Length = 250
Score = 154 bits (389), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 91/209 (43%), Positives = 125/209 (59%), Gaps = 7/209 (3%)
Query: 10 NWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSL-RPGFHVAAQNCW 68
NWKCNG+ + + +++ + N L + K L P F +AAQN
Sbjct: 11 NWKCNGSQQSLSELIDLFNS--TSINHDVQCVVASTFVHLAMTKERLSHPKFVIAAQNA- 67
Query: 69 VKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACV 128
+ K GAFTGE+S +L + + W++LGHSERR E NE V DKVA A++ G VIAC+
Sbjct: 68 IAKSGAFTGEVSLPILKDFGVNWIVLGHSERRAYYGETNEIVADKVAAAVASGFMVIACI 127
Query: 129 GETLEQREAGSTMDVVAAQ--TKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVH 186
GETL++RE+G T VV Q A + + W+ +V+AYEPVWAIGTGKVATP QAQE H
Sbjct: 128 GETLQERESGRTAVVVLTQIAAIAKKLKKADWAKVVIAYEPVWAIGTGKVATPQQAQEAH 187
Query: 187 FELRKWLLANTSPEIAAATRIIYGGISIN 215
+ W+ + ++A RI+YGG S+N
Sbjct: 188 ALISSWVSSKIGADVAGELRILYGG-SVN 215
>pdb|2J24|A Chain A, The Functional Role Of The Conserved Active Site Proline
Of Triosephosphate Isomerase
pdb|2J24|B Chain B, The Functional Role Of The Conserved Active Site Proline
Of Triosephosphate Isomerase
pdb|2J27|A Chain A, The Functional Role Of The Conserved Active Site Proline
Of Triosephosphate Isomerase
pdb|2J27|B Chain B, The Functional Role Of The Conserved Active Site Proline
Of Triosephosphate Isomerase
Length = 250
Score = 153 bits (387), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 91/209 (43%), Positives = 125/209 (59%), Gaps = 7/209 (3%)
Query: 10 NWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSL-RPGFHVAAQNCW 68
NWKCNG+ + + +++ + N L + K L P F +AAQN
Sbjct: 11 NWKCNGSQQSLSELIDLFNS--TSINHDVQCVVASTFVHLAMTKERLSHPKFVIAAQNA- 67
Query: 69 VKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACV 128
+ K GAFTGE+S +L + + W++LGHSERR E NE V DKVA A++ G VIAC+
Sbjct: 68 IAKSGAFTGEVSLPILKDFGVNWIVLGHSERRAYYGETNEIVADKVAAAVASGFMVIACI 127
Query: 129 GETLEQREAGSTMDVVAAQ--TKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVH 186
GETL++RE+G T VV Q A + + W+ +V+AYE VWAIGTGKVATP QAQE H
Sbjct: 128 GETLQERESGRTAVVVLTQIAAIAKKLKKADWAKVVIAYEAVWAIGTGKVATPQQAQEAH 187
Query: 187 FELRKWLLANTSPEIAAATRIIYGGISIN 215
+R W+ + ++A RI+YGG S+N
Sbjct: 188 ALIRSWVSSKIGADVAGELRILYGG-SVN 215
>pdb|1B9B|A Chain A, Triosephosphate Isomerase Of Thermotoga Maritima
pdb|1B9B|B Chain B, Triosephosphate Isomerase Of Thermotoga Maritima
Length = 255
Score = 150 bits (380), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 93/213 (43%), Positives = 117/213 (54%), Gaps = 6/213 (2%)
Query: 3 RKFFVGGNWKCNGTPEEVKKIVSVL-NE-GQXXXXXXXXXXXXXXXXFLGLVKSSLRPGF 60
RK + GNWK + T E KK VS+L NE +G + S
Sbjct: 3 RKLILAGNWKMHKTISEAKKFVSLLVNELHDVKEFEIVVCPPFTALSEVGEILSG--RNI 60
Query: 61 HVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQ 120
+ AQN + + GAFTGEIS ML + + +VI+GHSERR I E +EF+ KV L +
Sbjct: 61 KLGAQNVFYEDQGAFTGEISPLMLQEIGVEYVIVGHSERRRIFKEDDEFINRKVKAVLEK 120
Query: 121 GLKVIACVGETLEQREAGSTMDVVAAQTKA--IADRVSSWSNIVLAYEPVWAIGTGKVAT 178
G+ I CVGETLE+RE G T VV Q + +V+AYEPVWAIGTG+VAT
Sbjct: 121 GMTPILCVGETLEEREKGLTFCVVEKQVREGFYGLDKEEAKRVVIAYEPVWAIGTGRVAT 180
Query: 179 PAQAQEVHFELRKWLLANTSPEIAAATRIIYGG 211
P QAQEVH +RK L E A + RI+YGG
Sbjct: 181 PQQAQEVHAFIRKLLSEMYDEETAGSIRILYGG 213
>pdb|2Y6Z|A Chain A, Crystallographic Structure Of Gm23 An Example Of Catalytic
Migration From Tim To Thiamin Phosphate Synthase
Length = 256
Score = 140 bits (353), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 87/212 (41%), Positives = 120/212 (56%), Gaps = 18/212 (8%)
Query: 10 NWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSL-RPGFHVAAQNCW 68
NWKCNG + + +++ + N + K L P F +AAQN
Sbjct: 22 NWKCNGGGQSLSELIDLFNSTSINHDVQCVVAPSWYMGAQAMTKERLSHPKFVIAAQNAG 81
Query: 69 VKKGGAFTGEISAEMLVNLE---IPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVI 125
+A+ L +L+ I W++LGHSERR E NE V DKVA A++ G VI
Sbjct: 82 -----------NADALASLKDFGISWIVLGHSERRAYYGETNEIVADKVAAAVASGFMVI 130
Query: 126 ACVGETLEQREAGSTMDVVAAQTKAIADRV--SSWSNIVLAYEPVWAIGTGKVATPAQAQ 183
AC+GETL++R +G T VV Q AIA ++ + W+ +V+AYEPVWAIGTGKVATP QAQ
Sbjct: 131 ACIGETLQERSSGRTAVVVLTQITAIAKKLKKADWAKVVIAYEPVWAIGTGKVATPQQAQ 190
Query: 184 EVHFELRKWLLANTSPEIAAATRIIYGGISIN 215
E H +R W+ + ++A RI+YGG S+N
Sbjct: 191 EAHALIRSWVSSKVGADVAGELRILYGG-SVN 221
>pdb|2Y70|A Chain A, Crystallographic Structure Of Gm23, Mutant G89d, An
Example Of Catalytic Migration From Tim To Thiamin
Phosphate Synthase.
pdb|2Y70|B Chain B, Crystallographic Structure Of Gm23, Mutant G89d, An
Example Of Catalytic Migration From Tim To Thiamin
Phosphate Synthase.
pdb|2Y70|C Chain C, Crystallographic Structure Of Gm23, Mutant G89d, An
Example Of Catalytic Migration From Tim To Thiamin
Phosphate Synthase.
pdb|2Y70|D Chain D, Crystallographic Structure Of Gm23, Mutant G89d, An
Example Of Catalytic Migration From Tim To Thiamin
Phosphate Synthase
Length = 245
Score = 139 bits (351), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 86/216 (39%), Positives = 120/216 (55%), Gaps = 18/216 (8%)
Query: 6 FVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSL-RPGFHVAA 64
NWKCNG+ + + +++ + N + K L P F +AA
Sbjct: 7 IAAANWKCNGSQQSLSELIDLFNSTSINHDVQCVVAPSWYMGAQAMTKERLSHPKFVIAA 66
Query: 65 QNCWVKKGGAFTGEISAEMLVNLE---IPWVILGHSERRLILNELNEFVGDKVAYALSQG 121
QN +A+ L +L+ I W++L HSERR E NE V DKVA A++ G
Sbjct: 67 QNAG-----------NADALASLKDFGISWIVLDHSERRAYYGETNEIVADKVAAAVASG 115
Query: 122 LKVIACVGETLEQREAGSTMDVVAAQTKAIADRV--SSWSNIVLAYEPVWAIGTGKVATP 179
VIAC+GETL++R +G T VV Q AIA ++ + W+ +V+AYEPVWAIGTGKVATP
Sbjct: 116 FMVIACIGETLQERSSGRTAVVVLTQITAIAKKLKKADWAKVVIAYEPVWAIGTGKVATP 175
Query: 180 AQAQEVHFELRKWLLANTSPEIAAATRIIYGGISIN 215
QAQE H +R W+ + ++A RI+YGG S+N
Sbjct: 176 QQAQEAHALIRSWVSSKVGADVAGELRILYGG-SVN 210
>pdb|2BTM|A Chain A, Does The His12-Lys13 Pair Play A Role In The Adaptation Of
Thermophilic Tims To High Temperatures?
pdb|2BTM|B Chain B, Does The His12-Lys13 Pair Play A Role In The Adaptation Of
Thermophilic Tims To High Temperatures?
Length = 252
Score = 136 bits (342), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 88/212 (41%), Positives = 114/212 (53%), Gaps = 4/212 (1%)
Query: 3 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLG-LVKSSLRPGFH 61
RK + GNWK NGT E + V + +G FL LV+++
Sbjct: 1 RKPIIAGNWKMNGTLAEAVQFVEDV-KGHVPPADEVISVVCAPFLFLDRLVQAADGTDLK 59
Query: 62 VAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQG 121
+ AQ GA+TGE+S ML +L + +VILGHSERR + E +E V KV A ++G
Sbjct: 60 IGAQTMHFADQGAYTGEVSPVMLKDLGVTYVILGHSERRQMFAETDETVNKKVLAAFTRG 119
Query: 122 LKVIACVGETLEQREAGSTMDVVAAQT-KAIADRVSSW-SNIVLAYEPVWAIGTGKVATP 179
L I C GE+LE+REAG T VVA+Q KA+A V+AYEP+WAIGTGK +TP
Sbjct: 120 LIPIICCGESLEEREAGQTNAVVASQVEKALAGLTPEQVKQAVIAYEPIWAIGTGKSSTP 179
Query: 180 AQAQEVHFELRKWLLANTSPEIAAATRIIYGG 211
A V +R + PE A A RI YGG
Sbjct: 180 EDANSVCGHIRSVVSRLFGPEAAEAIRIQYGG 211
>pdb|2WSQ|A Chain A, Monotim Mutant Rmm0-1, Dimeric Form.
pdb|2WSQ|B Chain B, Monotim Mutant Rmm0-1, Dimeric Form.
pdb|2WSQ|C Chain C, Monotim Mutant Rmm0-1, Dimeric Form.
pdb|2WSQ|D Chain D, Monotim Mutant Rmm0-1, Dimeric Form
Length = 242
Score = 136 bits (342), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 86/209 (41%), Positives = 117/209 (55%), Gaps = 14/209 (6%)
Query: 10 NWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSL-RPGFHVAAQNCW 68
NWKCNG+ + + +++ + N L + K L P F +AAQN
Sbjct: 10 NWKCNGSQQSLSELIDLFNS--TSINHDVQCVVAPSFVHLAMTKERLSHPKFVIAAQNAG 67
Query: 69 VKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACV 128
G A L + + W++LGHSERR E NE V DKVA A++ G VIAC+
Sbjct: 68 NADGLA--------SLKDFGVNWIVLGHSERRAYYGETNEIVADKVAAAVASGFMVIACI 119
Query: 129 GETLEQREAGSTMDVVAAQ--TKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVH 186
GETL++RE+G T VV Q A + + W+ +V+AYEPVWAIGTGKVATP QAQE H
Sbjct: 120 GETLQERESGRTAVVVLTQIAAIAKKLKKADWAKVVIAYEPVWAIGTGKVATPQQAQETH 179
Query: 187 FELRKWLLANTSPEIAAATRIIYGGISIN 215
+R W+ + ++A RI+YGG S+N
Sbjct: 180 ALIRSWVSSKIGADVAGELRILYGG-SVN 207
>pdb|1ML1|A Chain A, Protein Engineering With Monomeric Triosephosphate
Isomerase: The Modelling And Structure Verification Of A
Seven Residue Loop
pdb|1ML1|C Chain C, Protein Engineering With Monomeric Triosephosphate
Isomerase: The Modelling And Structure Verification Of A
Seven Residue Loop
pdb|1ML1|E Chain E, Protein Engineering With Monomeric Triosephosphate
Isomerase: The Modelling And Structure Verification Of A
Seven Residue Loop
pdb|1ML1|G Chain G, Protein Engineering With Monomeric Triosephosphate
Isomerase: The Modelling And Structure Verification Of A
Seven Residue Loop
pdb|1ML1|I Chain I, Protein Engineering With Monomeric Triosephosphate
Isomerase: The Modelling And Structure Verification Of A
Seven Residue Loop
pdb|1ML1|K Chain K, Protein Engineering With Monomeric Triosephosphate
Isomerase: The Modelling And Structure Verification Of A
Seven Residue Loop
Length = 243
Score = 136 bits (342), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 86/212 (40%), Positives = 121/212 (57%), Gaps = 20/212 (9%)
Query: 10 NWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSL-RPGFHVAAQNCW 68
NWKC+G+P+ + +++ + N L + K L P F +AAQN
Sbjct: 11 NWKCSGSPDSLSELIDLFNS--TSINHDVQCVVASTFVHLAMTKERLSHPKFVIAAQNAG 68
Query: 69 VKKGGAFTGEISAEMLVNLE---IPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVI 125
+A+ L +L+ + W++LGHSERR E NE V DKVA A++ G VI
Sbjct: 69 -----------NADALASLKDFGVNWIVLGHSERRWYYGETNEIVADKVAAAVASGFMVI 117
Query: 126 ACVGETLEQREAGSTMDVVAAQ--TKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQ 183
AC+GETL++RE+G T VV Q A + + W+ +V+AYEPVWAIGTGKVATP QAQ
Sbjct: 118 ACIGETLQERESGRTAVVVLTQIAAIAKKLKKADWAKVVIAYEPVWAIGTGKVATPQQAQ 177
Query: 184 EVHFELRKWLLANTSPEIAAATRIIYGGISIN 215
E H +R W+ + ++A RI+YGG S+N
Sbjct: 178 EAHALIRSWVSSKIGADVAGELRILYGG-SVN 208
>pdb|1TTI|A Chain A, Three New Crystal Structures Of Point Mutation Variants Of
Monotim: Conformational Flexibility Of Loop-1,Loop-4 And
Loop-8
Length = 243
Score = 136 bits (342), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 86/209 (41%), Positives = 117/209 (55%), Gaps = 14/209 (6%)
Query: 10 NWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSL-RPGFHVAAQNCW 68
NWKCNG+ + + +++ + N L + K L P F +AAQN
Sbjct: 11 NWKCNGSQQSLSELIDLFNS--TSINHDVQCVVASTFVHLAMTKERLSHPKFVIAAQNAG 68
Query: 69 VKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACV 128
G A L + + W++LGHSERR E NE V DKVA A++ G VIAC+
Sbjct: 69 NADGLA--------SLKDFGVNWIVLGHSERRWYYGETNEIVADKVAAAVASGFMVIACI 120
Query: 129 GETLEQREAGSTMDVVAAQ--TKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVH 186
GETL++RE+G T VV Q A + + W+ +V+AYEPVWAIGTGKVATP QAQE H
Sbjct: 121 GETLQERESGRTAVVVLTQIAAIAKKLKKADWAKVVIAYEPVWAIGTGKVATPQQAQEAH 180
Query: 187 FELRKWLLANTSPEIAAATRIIYGGISIN 215
+R W+ + ++A RI+YGG S+N
Sbjct: 181 ALIRSWVSSKIGADVAGELRILYGG-SVN 208
>pdb|1MSS|A Chain A, Large Scale Structural Rearrangements Of The Front Loops
In Monomerised Triosephosphate Isomerase, As Deduced
From The Comparison Of The Structural Properties Of
Monotim And Its Point Mutation Variant Monoss
pdb|1MSS|B Chain B, Large Scale Structural Rearrangements Of The Front Loops
In Monomerised Triosephosphate Isomerase, As Deduced
From The Comparison Of The Structural Properties Of
Monotim And Its Point Mutation Variant Monoss
pdb|1TTJ|A Chain A, Three New Crystal Structures Of Point Mutation Variants Of
Monotim: Conformational Flexibility Of Loop-1,Loop-4 And
Loop-8
Length = 243
Score = 135 bits (341), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 86/212 (40%), Positives = 120/212 (56%), Gaps = 20/212 (9%)
Query: 10 NWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSL-RPGFHVAAQNCW 68
NWKCNG+ + + +++ + N L + K L P F +AAQN
Sbjct: 11 NWKCNGSQQSLSELIDLFNS--TSINHDVQCVVASTSSHLAMTKERLSHPKFVIAAQNAG 68
Query: 69 VKKGGAFTGEISAEMLVNLE---IPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVI 125
+A+ L +L+ + W++LGHSERR E NE V DKVA A++ G VI
Sbjct: 69 -----------NADALASLKDFGVNWIVLGHSERRAYYGETNEIVADKVAAAVASGFMVI 117
Query: 126 ACVGETLEQREAGSTMDVVAAQ--TKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQ 183
AC+GETL++RE+G T VV Q A + + W+ +V+AYEPVWAIGTGKVATP QAQ
Sbjct: 118 ACIGETLQERESGRTAVVVLTQIAAIAKKLKKADWAKVVIAYEPVWAIGTGKVATPQQAQ 177
Query: 184 EVHFELRKWLLANTSPEIAAATRIIYGGISIN 215
E H +R W+ + ++A RI+YGG S+N
Sbjct: 178 EAHALIRSWVSSKIGADVAGELRILYGG-SVN 208
>pdb|2WSR|A Chain A, Monotim Mutant Rmm0-1, Monomeric Form
Length = 242
Score = 135 bits (340), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 85/209 (40%), Positives = 117/209 (55%), Gaps = 14/209 (6%)
Query: 10 NWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSL-RPGFHVAAQNCW 68
NWKCNG+ + + +++ + N + + K L P F +AAQN
Sbjct: 10 NWKCNGSQQSLSELIDLFNS--TSINHDVQCVVAPRFVMIAMTKERLSHPKFVIAAQNAG 67
Query: 69 VKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACV 128
G A L + + W++LGHSERR E NE V DKVA A++ G VIAC+
Sbjct: 68 NADGLA--------SLKDFGVNWIVLGHSERRAYYGETNEIVADKVAAAVASGFMVIACI 119
Query: 129 GETLEQREAGSTMDVVAAQ--TKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVH 186
GETL++RE+G T VV Q A + + W+ +V+AYEPVWAIGTGKVATP QAQE H
Sbjct: 120 GETLQERESGRTAVVVLTQIAAIAKKLKKADWAKVVIAYEPVWAIGTGKVATPQQAQETH 179
Query: 187 FELRKWLLANTSPEIAAATRIIYGGISIN 215
+R W+ + ++A RI+YGG S+N
Sbjct: 180 ALIRSWVSSKIGADVAGELRILYGG-SVN 207
>pdb|1TRI|A Chain A, The Crystal Structure Of An Engineered Monomeric
Triosephosphate Isomerase, Monotim: The Correct
Modelling Of An Eight-Residue Loop
Length = 243
Score = 135 bits (339), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 86/212 (40%), Positives = 120/212 (56%), Gaps = 20/212 (9%)
Query: 10 NWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSL-RPGFHVAAQNCW 68
NWKCNG+ + + +++ + N L + K L P F +AAQN
Sbjct: 11 NWKCNGSQQSLSELIDLFNS--TSINHDVQCVVASTFVHLAMTKERLSHPKFVIAAQNAG 68
Query: 69 VKKGGAFTGEISAEMLVNLE---IPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVI 125
+A+ L +L+ + W++LGHSERR E NE V DKVA A++ G VI
Sbjct: 69 -----------NADALASLKDFGVNWIVLGHSERRAYYGETNEIVADKVAAAVASGFMVI 117
Query: 126 ACVGETLEQREAGSTMDVVAAQ--TKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQ 183
AC+GETL++RE+G T VV Q A + + W+ +V+AYEPVWAIGTGKVATP QAQ
Sbjct: 118 ACIGETLQERESGRTAVVVLTQIAAIAKKLKKADWAKVVIAYEPVWAIGTGKVATPQQAQ 177
Query: 184 EVHFELRKWLLANTSPEIAAATRIIYGGISIN 215
E H +R W+ + ++A RI+YGG S+N
Sbjct: 178 EAHALIRSWVSSKIGADVAGELRILYGG-SVN 208
>pdb|3UWU|A Chain A, Crystal Structure Of Staphylococcus Aureus Triosephosphate
Isomerase Complexed With Glycerol-3-Phosphate
pdb|3UWU|B Chain B, Crystal Structure Of Staphylococcus Aureus Triosephosphate
Isomerase Complexed With Glycerol-3-Phosphate
pdb|3UWV|A Chain A, Crystal Structure Of Staphylococcus Aureus Triosephosphate
Isomerase Complexed With 2-Phosphoglyceric Acid
pdb|3UWV|B Chain B, Crystal Structure Of Staphylococcus Aureus Triosephosphate
Isomerase Complexed With 2-Phosphoglyceric Acid
pdb|3UWW|A Chain A, Crystal Structure Of Staphylococcus Aureus Triosephosphate
Isomerase Complexed With 3-Phosphoglyceric Acid
pdb|3UWW|B Chain B, Crystal Structure Of Staphylococcus Aureus Triosephosphate
Isomerase Complexed With 3-Phosphoglyceric Acid
pdb|3UWY|A Chain A, Crystal Structure Of Triosephosphate Isomerase From
Methicillin Resistant Staphylococcus Aureus At 2.4
Angstrom Resolution
pdb|3UWY|B Chain B, Crystal Structure Of Triosephosphate Isomerase From
Methicillin Resistant Staphylococcus Aureus At 2.4
Angstrom Resolution
pdb|3UWZ|A Chain A, Crystal Structure Of Staphylococcus Aureus Triosephosphate
Isomerase Complexed With Glycerol-2-Phosphate
pdb|3UWZ|B Chain B, Crystal Structure Of Staphylococcus Aureus Triosephosphate
Isomerase Complexed With Glycerol-2-Phosphate
Length = 261
Score = 135 bits (339), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 78/213 (36%), Positives = 109/213 (51%), Gaps = 4/213 (1%)
Query: 3 RKFFVGGNWKCNGTPEEVKKIVSVLN--EGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGF 60
R + GNWK N T +E K V+ L VK G
Sbjct: 10 RTPIIAGNWKMNKTVQEAKDFVNALPTLPDSKEVESVICAPAIQLDALTTAVKEGKAQGL 69
Query: 61 HVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQ 120
+ AQN + + GAFTGE S L +L + +V++GHSERR + +E +E + K
Sbjct: 70 EIGAQNTYFEDNGAFTGETSPVALADLGVKYVVIGHSERRELFHETDEEINKKAHAIFKH 129
Query: 121 GLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVS--SWSNIVLAYEPVWAIGTGKVAT 178
G+ I CVGET E+RE+G DVV Q K +S ++V+AYEP+WAIGTGK +T
Sbjct: 130 GMTPIICVGETDEERESGKANDVVGEQVKKAVAGLSEDQLKSVVIAYEPIWAIGTGKSST 189
Query: 179 PAQAQEVHFELRKWLLANTSPEIAAATRIIYGG 211
A E+ +R+ + +S E++ ATRI YGG
Sbjct: 190 SEDANEMCAFVRQTIADLSSKEVSEATRIQYGG 222
>pdb|3M9Y|A Chain A, Crystal Structure Of Triosephosphate Isomerase From
Methicillin Resistant Staphylococcus Aureus At 1.9
Angstrom Resolution
pdb|3M9Y|B Chain B, Crystal Structure Of Triosephosphate Isomerase From
Methicillin Resistant Staphylococcus Aureus At 1.9
Angstrom Resolution
Length = 254
Score = 135 bits (339), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 78/213 (36%), Positives = 109/213 (51%), Gaps = 4/213 (1%)
Query: 3 RKFFVGGNWKCNGTPEEVKKIVSVLN--EGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGF 60
R + GNWK N T +E K V+ L VK G
Sbjct: 3 RTPIIAGNWKMNKTVQEAKDFVNALPTLPDSKEVESVICAPAIQLDALTTAVKEGKAQGL 62
Query: 61 HVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQ 120
+ AQN + + GAFTGE S L +L + +V++GHSERR + +E +E + K
Sbjct: 63 EIGAQNTYFEDNGAFTGETSPVALADLGVKYVVIGHSERRELFHETDEEINKKAHAIFKH 122
Query: 121 GLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSS--WSNIVLAYEPVWAIGTGKVAT 178
G+ I CVGET E+RE+G DVV Q K +S ++V+AYEP+WAIGTGK +T
Sbjct: 123 GMTPIICVGETDEERESGKANDVVGEQVKKAVAGLSEDQLKSVVIAYEPIWAIGTGKSST 182
Query: 179 PAQAQEVHFELRKWLLANTSPEIAAATRIIYGG 211
A E+ +R+ + +S E++ ATRI YGG
Sbjct: 183 SEDANEMCAFVRQTIADLSSKEVSEATRIQYGG 215
>pdb|1TMH|A Chain A, Modular Mutagenesis Of A Tim-barrel Enzyme: The Crystal
Structure Of A Chimeric E. Coli Tim Having The Eighth
(beta-alpha)-unit Replaced By The Equivalent Unit Of
Chicken Tim
pdb|1TMH|B Chain B, Modular Mutagenesis Of A Tim-barrel Enzyme: The Crystal
Structure Of A Chimeric E. Coli Tim Having The Eighth
(beta-alpha)-unit Replaced By The Equivalent Unit Of
Chicken Tim
pdb|1TMH|C Chain C, Modular Mutagenesis Of A Tim-barrel Enzyme: The Crystal
Structure Of A Chimeric E. Coli Tim Having The Eighth
(beta-alpha)-unit Replaced By The Equivalent Unit Of
Chicken Tim
pdb|1TMH|D Chain D, Modular Mutagenesis Of A Tim-barrel Enzyme: The Crystal
Structure Of A Chimeric E. Coli Tim Having The Eighth
(beta-alpha)-unit Replaced By The Equivalent Unit Of
Chicken Tim
Length = 254
Score = 132 bits (332), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 86/217 (39%), Positives = 115/217 (52%), Gaps = 8/217 (3%)
Query: 3 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHV 62
R V GNWK NG+ V ++VS L + + ++ + K G H+
Sbjct: 2 RHPLVMGNWKLNGSRHMVHELVSNLRK-ELAGVAGCAVAIAPPEMYIDMAKREAE-GSHI 59
Query: 63 --AAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQ 120
AQN + GAFTGE SA ML ++ ++I+GHSERR E +E + K A Q
Sbjct: 60 MLGAQNVDLNLSGAFTGETSAAMLKDIGAQYIIIGHSERRTYHKESDELIAKKFAVLKEQ 119
Query: 121 GLKVIACVGETLEQREAGSTMDVVAAQTKAI--ADRVSSWSNIVLAYEPVWAIGTGKVAT 178
GL + C+GET + EAG T +V A Q A+ +++ V+AYEPVWAIGTGK AT
Sbjct: 120 GLTPVLCIGETEAENEAGKTEEVCARQIDAVLKTQGAAAFEGAVIAYEPVWAIGTGKSAT 179
Query: 179 PAQAQEVHFELRKWLLANTSPEIAAATRIIYGGISIN 215
PAQAQ VH +R +A IA I YGG S+N
Sbjct: 180 PAQAQAVHKFIRDH-IAKVDANIAEQVIIQYGG-SVN 214
>pdb|4IOT|A Chain A, High-resolution Structure Of Triosephosphate Isomerase
From E. Coli
pdb|4IOT|B Chain B, High-resolution Structure Of Triosephosphate Isomerase
From E. Coli
Length = 255
Score = 132 bits (331), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 86/217 (39%), Positives = 115/217 (52%), Gaps = 8/217 (3%)
Query: 3 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHV 62
R V GNWK NG+ V ++VS L + + ++ + K G H+
Sbjct: 2 RHPLVMGNWKLNGSRHMVHELVSNLRK-ELAGVAGCAVAIAPPEMYIDMAKREAE-GSHI 59
Query: 63 --AAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQ 120
AQN + GAFTGE SA ML ++ ++I+GHSERR E +E + K A Q
Sbjct: 60 MLGAQNVDLNLSGAFTGETSAAMLKDIGAQYIIIGHSERRTYHKESDELIAKKFAVLKEQ 119
Query: 121 GLKVIACVGETLEQREAGSTMDVVAAQTKAI--ADRVSSWSNIVLAYEPVWAIGTGKVAT 178
GL + C+GET + EAG T +V A Q A+ +++ V+AYEPVWAIGTGK AT
Sbjct: 120 GLTPVLCIGETEAENEAGKTEEVCARQIDAVLKTQGAAAFEGAVIAYEPVWAIGTGKSAT 179
Query: 179 PAQAQEVHFELRKWLLANTSPEIAAATRIIYGGISIN 215
PAQAQ VH +R +A IA I YGG S+N
Sbjct: 180 PAQAQAVHKFIRDH-IAKVDANIAEQVIIQYGG-SVN 214
>pdb|1TRE|A Chain A, The Structure Of Triosephosphate Isomerase From
Escherichia Coli Determined At 2.6 Angstrom Resolution
pdb|1TRE|B Chain B, The Structure Of Triosephosphate Isomerase From
Escherichia Coli Determined At 2.6 Angstrom Resolution
Length = 255
Score = 132 bits (331), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 86/217 (39%), Positives = 115/217 (52%), Gaps = 8/217 (3%)
Query: 3 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPGFHV 62
R V GNWK NG+ V ++VS L + + ++ + K G H+
Sbjct: 2 RHPLVMGNWKLNGSRHMVHELVSNLRK-ELAGVAGCAVAIAPPEMYIDMAKREAE-GSHI 59
Query: 63 --AAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQ 120
AQN + GAFTGE SA ML ++ ++I+GHSERR E +E + K A Q
Sbjct: 60 MLGAQNVNLNLSGAFTGETSAAMLKDIGAQYIIIGHSERRTYHKESDELIAKKFAVLKEQ 119
Query: 121 GLKVIACVGETLEQREAGSTMDVVAAQTKAI--ADRVSSWSNIVLAYEPVWAIGTGKVAT 178
GL + C+GET + EAG T +V A Q A+ +++ V+AYEPVWAIGTGK AT
Sbjct: 120 GLTPVLCIGETEAENEAGKTEEVCARQIDAVLKTQGAAAFEGAVIAYEPVWAIGTGKSAT 179
Query: 179 PAQAQEVHFELRKWLLANTSPEIAAATRIIYGGISIN 215
PAQAQ VH +R +A IA I YGG S+N
Sbjct: 180 PAQAQAVHKFIRDH-IAKVDANIAEQVIIQYGG-SVN 214
>pdb|1BTM|A Chain A, Triosephosphate Isomerase (Tim) Complexed With 2-
Phosphoglycolic Acid
pdb|1BTM|B Chain B, Triosephosphate Isomerase (Tim) Complexed With 2-
Phosphoglycolic Acid
Length = 252
Score = 131 bits (330), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 86/212 (40%), Positives = 113/212 (53%), Gaps = 4/212 (1%)
Query: 3 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLG-LVKSSLRPGFH 61
RK + GNWK + T E + V + +G FL LV+++
Sbjct: 1 RKPIIAGNWKMHKTLAEAVQFVEDV-KGHVPPADEVISVVCAPFLFLDRLVQAADGTDLK 59
Query: 62 VAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQG 121
+ AQ GA+TGE+S ML +L + +VILGHSERR + E +E V KV A ++G
Sbjct: 60 IGAQTMHFADQGAYTGEVSPVMLKDLGVTYVILGHSERRQMFAETDETVNKKVLAAFTRG 119
Query: 122 LKVIACVGETLEQREAGSTMDVVAAQT-KAIADRVSSW-SNIVLAYEPVWAIGTGKVATP 179
L I C GE+LE+REAG T VVA+Q KA+A V+AYEP+WAIGTGK +TP
Sbjct: 120 LIPIICCGESLEEREAGQTNAVVASQVEKALAGLTPEQVKQAVIAYEPIWAIGTGKSSTP 179
Query: 180 AQAQEVHFELRKWLLANTSPEIAAATRIIYGG 211
A V +R + PE A A RI YGG
Sbjct: 180 EDANSVCGHIRSVVSRLFGPEAAEAIRIQYGG 211
>pdb|1DKW|A Chain A, Crystal Structure Of Triose-Phosphate Isomerase With
Modified Substrate Binding Site
pdb|1DKW|B Chain B, Crystal Structure Of Triose-Phosphate Isomerase With
Modified Substrate Binding Site
Length = 238
Score = 130 bits (326), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 85/209 (40%), Positives = 117/209 (55%), Gaps = 15/209 (7%)
Query: 10 NWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSL-RPGFHVAAQNCW 68
NWK +G+P+ + +++ + N L + K L P F +AAQN
Sbjct: 10 NWK-SGSPDSLSELIDLFNS--TSINHDVQCVVASTFVHLAMTKERLSHPKFVIAAQNA- 65
Query: 69 VKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACV 128
E S L + + W++LGHSERR E NE V DKVA A++ G VIAC+
Sbjct: 66 -------GNEDSLPSLKDFGVNWIVLGHSERRWYYGETNEIVADKVAAAVASGFMVIACI 118
Query: 129 GETLEQREAGSTMDVVAAQ--TKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVH 186
GETL++RE+G T VV Q A + + W+ +V+AYEPVWAIGTGKVATP QAQE H
Sbjct: 119 GETLQERESGRTAVVVLTQIAAIAKKLKKADWAKVVIAYEPVWAIGTGKVATPQQAQEAH 178
Query: 187 FELRKWLLANTSPEIAAATRIIYGGISIN 215
+R W+ + ++A RI+YGG S+N
Sbjct: 179 ALIRSWVSSKIGADVAGELRILYGG-SVN 206
>pdb|2VEK|A Chain A, Structure-Based Enzyme Engineering Efforts With An
Inactive Monomeric Tim Variant: The Importance Of A
Single Point Mutation For Generating An Active Site With
Suitable Binding Properties
pdb|2VEK|B Chain B, Structure-Based Enzyme Engineering Efforts With An
Inactive Monomeric Tim Variant: The Importance Of A
Single Point Mutation For Generating An Active Site With
Suitable Binding Properties
pdb|2VEL|A Chain A, Structure-based Enzyme Engineering Efforts With An
Inactive Monomeric Tim Variant: The Importance Of A
Single Point Mutation For Generating An Active Site With
Suitable Binding Properties
pdb|2VEL|B Chain B, Structure-based Enzyme Engineering Efforts With An
Inactive Monomeric Tim Variant: The Importance Of A
Single Point Mutation For Generating An Active Site With
Suitable Binding Properties
pdb|2VEM|A Chain A, Structure-Based Enzyme Engineering Efforts With An
Inactive Monomeric Tim Variant: The Importance Of A
Single Point Mutation For Generating An Active Site With
Suitable Binding Properties
pdb|2VEM|B Chain B, Structure-Based Enzyme Engineering Efforts With An
Inactive Monomeric Tim Variant: The Importance Of A
Single Point Mutation For Generating An Active Site With
Suitable Binding Properties
pdb|2VEN|A Chain A, Structure-Based Enzyme Engineering Efforts With An
Inactive Monomeric Tim Variant: The Importance Of A
Single Point Mutation For Generating An Active Site With
Suitable Binding Properties
pdb|2VEN|B Chain B, Structure-Based Enzyme Engineering Efforts With An
Inactive Monomeric Tim Variant: The Importance Of A
Single Point Mutation For Generating An Active Site With
Suitable Binding Properties
pdb|2X16|A Chain A, Crystallographic Binding Studies With An Engineered
Monomeric Variant Of Triosephosphate Isomerase
pdb|2X16|B Chain B, Crystallographic Binding Studies With An Engineered
Monomeric Variant Of Triosephosphate Isomerase
pdb|2X1R|A Chain A, Crystallographic Binding Studies With An Engineered
Monomeric Variant Of Triosephosphate Isomerase
pdb|2X1R|B Chain B, Crystallographic Binding Studies With An Engineered
Monomeric Variant Of Triosephosphate Isomerase
pdb|2X1S|A Chain A, Crystallographic Binding Studies With An Engineered
Monomeric Variant Of Triosephosphate Isomerase
pdb|2X1S|B Chain B, Crystallographic Binding Studies With An Engineered
Monomeric Variant Of Triosephosphate Isomerase
pdb|2X1T|A Chain A, Crystallographic Binding Studies With An Engineered
Monomeric Variant Of Triosephosphate Isomerase
pdb|2X1T|B Chain B, Crystallographic Binding Studies With An Engineered
Monomeric Variant Of Triosephosphate Isomerase
pdb|2X1U|A Chain A, Crystallographic Binding Studies With An Engineered
Monomeric Variant Of Triosephosphate Isomerase
pdb|2X1U|B Chain B, Crystallographic Binding Studies With An Engineered
Monomeric Variant Of Triosephosphate Isomerase
pdb|2X2G|A Chain A, Crystallographic Binding Studies With An Engineered
Monomeric Variant Of Triosephosphate Isomerase
pdb|2X2G|B Chain B, Crystallographic Binding Studies With An Engineered
Monomeric Variant Of Triosephosphate Isomerase
Length = 238
Score = 127 bits (319), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 85/212 (40%), Positives = 120/212 (56%), Gaps = 21/212 (9%)
Query: 10 NWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSL-RPGFHVAAQNCW 68
NWK +G+P+ + +++ + N L + K L P F +AAQN
Sbjct: 10 NWK-SGSPDSLSELIDLFNS--TSINHDVQCVVASTFVHLAMTKERLSHPKFVIAAQNAG 66
Query: 69 VKKGGAFTGEISAEMLVNLE---IPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVI 125
+A+ L +L+ + W++LGHSERR E NE V DKVA A++ G VI
Sbjct: 67 -----------NADALASLKDFGVNWIVLGHSERRWYYGETNEIVADKVAAAVASGFMVI 115
Query: 126 ACVGETLEQREAGSTMDVVAAQ--TKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQ 183
AC+GETL++RE+G T VV Q A + + W+ +V+AYEPVWAIGTGKVATP QAQ
Sbjct: 116 ACIGETLQERESGRTAVVVLTQIAAIAKKLKKADWAKVVIAYEPVWAIGTGKVATPQQAQ 175
Query: 184 EVHFELRKWLLANTSPEIAAATRIIYGGISIN 215
E H +R W+ + ++A RI+YGG S+N
Sbjct: 176 EAHALIRSWVSSKIGADVAGELRILYGG-SVN 206
>pdb|2VEI|A Chain A, Structure-Based Enzyme Engineering Efforts With An
Inactive Monomeric Tim Variant: The Importance Of A
Single Point Mutation For Generating An Active Site With
Suitable Binding Properties
pdb|2VEI|B Chain B, Structure-Based Enzyme Engineering Efforts With An
Inactive Monomeric Tim Variant: The Importance Of A
Single Point Mutation For Generating An Active Site With
Suitable Binding Properties
pdb|2VEI|C Chain C, Structure-Based Enzyme Engineering Efforts With An
Inactive Monomeric Tim Variant: The Importance Of A
Single Point Mutation For Generating An Active Site With
Suitable Binding Properties
Length = 238
Score = 127 bits (319), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 85/212 (40%), Positives = 120/212 (56%), Gaps = 21/212 (9%)
Query: 10 NWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSL-RPGFHVAAQNCW 68
NWK +G+P+ + +++ + N L + K L P F +AAQN
Sbjct: 10 NWK-SGSPDSLSELIDLFNS--TSINHDVQCVVASTFVHLAMTKERLSHPKFVIAAQNAG 66
Query: 69 VKKGGAFTGEISAEMLVNLE---IPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVI 125
+A+ L +L+ + W++LGHSERR E NE V DKVA A++ G VI
Sbjct: 67 -----------NADALASLKDFGVNWIVLGHSERRWYYGETNEIVADKVAAAVASGFMVI 115
Query: 126 ACVGETLEQREAGSTMDVVAAQ--TKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQ 183
AC+GETL++RE+G T VV Q A + + W+ +V+AYEPVWAIGTGKVATP QAQ
Sbjct: 116 ACIGETLQERESGRTAVVVLTQIAAIAKKLKKADWAKVVIAYEPVWAIGTGKVATPQQAQ 175
Query: 184 EVHFELRKWLLANTSPEIAAATRIIYGGISIN 215
E H +R W+ + ++A RI+YGG S+N
Sbjct: 176 EAHALIRSWVSSKIGADVAGELRILYGG-SVN 206
>pdb|2V2D|A Chain A, The A178l Mutation In The C-Terminal Hinge Of The Flexible
Loop-6 Of Triosephosphate Isomerase (Tim) Induces A More
Closed Conformation Of This Hinge Region In Dimeric And
Monomeric Tim
pdb|2V2H|A Chain A, The A178l Mutation In The C-Terminal Hinge Of The Flexible
Loop-6 Of Triosephosphate Isomerase (Tim) Induces A More
Closed Conformation Of This Hinge Region In Dimeric And
Monomeric Tim
pdb|2V2H|B Chain B, The A178l Mutation In The C-Terminal Hinge Of The Flexible
Loop-6 Of Triosephosphate Isomerase (Tim) Induces A More
Closed Conformation Of This Hinge Region In Dimeric And
Monomeric Tim
pdb|2V2H|C Chain C, The A178l Mutation In The C-Terminal Hinge Of The Flexible
Loop-6 Of Triosephosphate Isomerase (Tim) Induces A More
Closed Conformation Of This Hinge Region In Dimeric And
Monomeric Tim
Length = 242
Score = 125 bits (314), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/212 (39%), Positives = 119/212 (56%), Gaps = 21/212 (9%)
Query: 10 NWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSL-RPGFHVAAQNCW 68
NWK +G+P+ + +++ + N L + K L P F +AAQN
Sbjct: 11 NWK-SGSPDSLSELIDLFNS--TSINHDVQCVVASTFVHLAMTKERLSHPKFVIAAQNAG 67
Query: 69 VKKGGAFTGEISAEMLVNLE---IPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVI 125
+A+ L +L+ + W++LGHSERR E NE V DKVA A++ G VI
Sbjct: 68 -----------NADALASLKDFGVNWIVLGHSERRWYYGETNEIVADKVAAAVASGFMVI 116
Query: 126 ACVGETLEQREAGSTMDVVAAQ--TKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQ 183
AC+GETL++RE+G T VV Q A + + W+ +V+AYEPVWAIGTGKV TP QAQ
Sbjct: 117 ACIGETLQERESGRTAVVVLTQIAAIAKKLKKADWAKVVIAYEPVWAIGTGKVLTPQQAQ 176
Query: 184 EVHFELRKWLLANTSPEIAAATRIIYGGISIN 215
E H +R W+ + ++A RI+YGG S+N
Sbjct: 177 EAHALIRSWVSSKIGADVAGELRILYGG-SVN 207
>pdb|1AW1|A Chain A, Triosephosphate Isomerase Of Vibrio Marinus Complexed With
2-Phosphoglycolate
pdb|1AW1|B Chain B, Triosephosphate Isomerase Of Vibrio Marinus Complexed With
2-Phosphoglycolate
pdb|1AW1|D Chain D, Triosephosphate Isomerase Of Vibrio Marinus Complexed With
2-Phosphoglycolate
pdb|1AW1|E Chain E, Triosephosphate Isomerase Of Vibrio Marinus Complexed With
2-Phosphoglycolate
pdb|1AW1|G Chain G, Triosephosphate Isomerase Of Vibrio Marinus Complexed With
2-Phosphoglycolate
pdb|1AW1|H Chain H, Triosephosphate Isomerase Of Vibrio Marinus Complexed With
2-Phosphoglycolate
pdb|1AW1|J Chain J, Triosephosphate Isomerase Of Vibrio Marinus Complexed With
2-Phosphoglycolate
pdb|1AW1|K Chain K, Triosephosphate Isomerase Of Vibrio Marinus Complexed With
2-Phosphoglycolate
pdb|1AW2|A Chain A, Triosephosphate Isomerase Of Vibrio Marinus
pdb|1AW2|B Chain B, Triosephosphate Isomerase Of Vibrio Marinus
pdb|1AW2|D Chain D, Triosephosphate Isomerase Of Vibrio Marinus
pdb|1AW2|E Chain E, Triosephosphate Isomerase Of Vibrio Marinus
pdb|1AW2|G Chain G, Triosephosphate Isomerase Of Vibrio Marinus
pdb|1AW2|H Chain H, Triosephosphate Isomerase Of Vibrio Marinus
pdb|1AW2|J Chain J, Triosephosphate Isomerase Of Vibrio Marinus
pdb|1AW2|K Chain K, Triosephosphate Isomerase Of Vibrio Marinus
Length = 256
Score = 124 bits (312), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 79/214 (36%), Positives = 109/214 (50%), Gaps = 7/214 (3%)
Query: 3 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLR---PG 59
R V GNWK NG+ E V +++ LN + F+ L + +L
Sbjct: 2 RHPVVMGNWKLNGSKEMVVDLLNGLN-AELEGVTGVDVAVAPPALFVDLAERTLTEAGSA 60
Query: 60 FHVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALS 119
+ AQN + GAFTG++S ML +I+GHSERR E +EFV K A+
Sbjct: 61 IILGAQNTDLNNSGAFTGDMSPAMLKEFGATHIIIGHSERREYHAESDEFVAKKFAFLKE 120
Query: 120 QGLKVIACVGETLEQREAGSTMDVVAAQTKAIADR--VSSWSNIVLAYEPVWAIGTGKVA 177
GL + C+GE+ Q EAG TM V A Q A+ + V + ++AYEP+WAIGTGK A
Sbjct: 121 NGLTPVLCIGESDAQNEAGETMAVCARQLDAVINTQGVEALEGAIIAYEPIWAIGTGKAA 180
Query: 178 TPAQAQEVHFELRKWLLANTSPEIAAATRIIYGG 211
T AQ +H ++R +A S +A I YGG
Sbjct: 181 TAEDAQRIHAQIRAH-IAEKSEAVAKNVVIQYGG 213
>pdb|1YYA|A Chain A, Crystal Structure Of Tt0473, Putative Triosephosphate
Isomerase From Thermus Thermophilus Hb8
pdb|1YYA|B Chain B, Crystal Structure Of Tt0473, Putative Triosephosphate
Isomerase From Thermus Thermophilus Hb8
Length = 250
Score = 120 bits (302), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 80/218 (36%), Positives = 109/218 (50%), Gaps = 10/218 (4%)
Query: 3 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSL---RPG 59
R+ V GNWK + TP E + + L + L + K L + G
Sbjct: 2 RRVLVAGNWKMHKTPSEARVWFAELK--RLLPPLQSEAAVLPAFPILPVAKEVLAETQVG 59
Query: 60 FHVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALS 119
+ AQ+ K GA+TGE+SA ML +L + I+GHSERR E + V +K L
Sbjct: 60 Y--GAQDVSAHKEGAYTGEVSARMLSDLGCRYAIVGHSERRRYHGETDALVAEKAKRLLE 117
Query: 120 QGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSN--IVLAYEPVWAIGTGKVA 177
+G+ I CVGE LE RE G + Q + + V +V+AYEPVWAIGTGK A
Sbjct: 118 EGITPILCVGEPLEVREKGEAVPYTLRQLRGSLEGVEPPGPEALVIAYEPVWAIGTGKNA 177
Query: 178 TPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGISIN 215
TP A+ +H +RK L A+ RI+YGG S+N
Sbjct: 178 TPEDAEAMHQAIRKALSERYGEAFASRVRILYGG-SVN 214
>pdb|4G1K|A Chain A, Crystal Structure Of Triosephosphate Isomerase From
Burkholderia Thailandensis
pdb|4G1K|B Chain B, Crystal Structure Of Triosephosphate Isomerase From
Burkholderia Thailandensis
pdb|4G1K|C Chain C, Crystal Structure Of Triosephosphate Isomerase From
Burkholderia Thailandensis
pdb|4G1K|D Chain D, Crystal Structure Of Triosephosphate Isomerase From
Burkholderia Thailandensis
Length = 272
Score = 118 bits (296), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 79/206 (38%), Positives = 112/206 (54%), Gaps = 7/206 (3%)
Query: 9 GNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPG-FHVAAQNC 67
GNWK +G + +++ + +G +L ++ L+ G +Q+
Sbjct: 32 GNWKMHGRLSGNQALLTEVAQGAQAVHDNVAIGVCVPFPYLAQAQAQLQGGRVSWGSQDV 91
Query: 68 WVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIAC 127
+ GA+TGE++A M+ + I+GHSERR E NE V K AL+ GL I C
Sbjct: 92 SAHEQGAYTGEVAAGMVAEFGAAYAIVGHSERRAYHGESNETVAAKARRALAAGLTPIVC 151
Query: 128 VGETLEQREAGSTMDVVAAQTKAIADRVS--SWSNIVLAYEPVWAIGTGKVATPAQAQEV 185
VGETL +REAG+T VV AQ A+ +S + IV+AYEPVWAIGTGK AT QAQ+V
Sbjct: 152 VGETLAEREAGTTEQVVGAQLDAVLAVLSPDEAARIVVAYEPVWAIGTGKSATAEQAQQV 211
Query: 186 HFELRKWLLANTSPEIAAATRIIYGG 211
H LR L A + ++ ++YGG
Sbjct: 212 HAFLRGRLAAKGAGHVS----LLYGG 233
>pdb|3KXQ|A Chain A, Crystal Structure Of Triosephosphate Isomerase From
Bartonella Henselae At 1.6a Resolution
pdb|3KXQ|B Chain B, Crystal Structure Of Triosephosphate Isomerase From
Bartonella Henselae At 1.6a Resolution
Length = 275
Score = 116 bits (291), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 76/211 (36%), Positives = 107/211 (50%), Gaps = 10/211 (4%)
Query: 6 FVGGNWKCNGTPE---EVKKIVSVLNE--GQXXXXXXXXXXXXXXXXFLGLVKSSLRPGF 60
F+ GNWK NGT E E++ I + ++ G+ F L ++ G
Sbjct: 29 FIAGNWKMNGTGESLGELRAIAAGISSDLGRLFEALICVPATLLSRAFDILGGENILLG- 87
Query: 61 HVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQ 120
QNC G +TG+ISA ML VI+GHSERR + E + V KV A
Sbjct: 88 ---GQNCHFDDYGPYTGDISAFMLKEAGASHVIIGHSERRTVYQESDAIVRAKVQAAWRA 144
Query: 121 GLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPA 180
GL + CVGETLE+R++ +DV+ Q + ++ NI++AYEPVWA+GTG AT A
Sbjct: 145 GLVALICVGETLEERKSNKVLDVLTRQLEGSLPDGATAENIIIAYEPVWAVGTGNTATSA 204
Query: 181 QAQEVHFELRKWLLANTSPEIAAATRIIYGG 211
EVH + + + E A R++YGG
Sbjct: 205 DVAEVHAFIHHKMHSRFGDE-GAKIRLLYGG 234
>pdb|3TA6|A Chain A, Structure Of Mycobacterium Tuberculosis Triosephosphate
Isomerase
pdb|3TA6|B Chain B, Structure Of Mycobacterium Tuberculosis Triosephosphate
Isomerase
pdb|3TAO|A Chain A, Structure Of Mycobacterium Tuberculosis Triosephosphate
Isomerase Bound To Phosphoglycolohydroxamate
pdb|3TAO|B Chain B, Structure Of Mycobacterium Tuberculosis Triosephosphate
Isomerase Bound To Phosphoglycolohydroxamate
Length = 267
Score = 114 bits (285), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 82/224 (36%), Positives = 114/224 (50%), Gaps = 13/224 (5%)
Query: 1 MGRKFFVGGNWKCNGTPEE----VKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSL 56
M RK + GNWK N E V+KI L + + +
Sbjct: 1 MSRKPLIAGNWKMNLNHYEAIALVQKIAFSLPDKYYDRVDVAVIPPFTDLRSVQTLVDGD 60
Query: 57 RPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAY 116
+ AQ+ GA+TG++S L L +V++GHSERR NE + V K A
Sbjct: 61 KLRLTYGAQDLSPHDSGAYTGDVSGAFLAKLGCSYVVVGHSERRTYHNEDDALVAAKAAT 120
Query: 117 ALSQGLKVIACVGETLEQREAGSTMDVVAAQTKA-----IADRVSSWSNIVLAYEPVWAI 171
AL GL I C+GE L+ REAG+ + Q + +A+++ S +V+AYEPVWAI
Sbjct: 121 ALKHGLTPIVCIGEHLDVREAGNHVAHNIEQLRGSLAGLLAEQIGS---VVIAYEPVWAI 177
Query: 172 GTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGISIN 215
GTG+VA+ A AQEV +RK L + SP IA R++YGG S+N
Sbjct: 178 GTGRVASAADAQEVCAAIRKELASLASPRIADTVRVLYGG-SVN 220
>pdb|3GVG|A Chain A, Crystal Structure Of Triosephosphate Isomerase From
Mycobacterium Tuberculosis
pdb|3GVG|B Chain B, Crystal Structure Of Triosephosphate Isomerase From
Mycobacterium Tuberculosis
Length = 283
Score = 111 bits (278), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 81/222 (36%), Positives = 113/222 (50%), Gaps = 13/222 (5%)
Query: 3 RKFFVGGNWKCNGTPEE----VKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRP 58
RK + GNWK N E V+KI L + + + +
Sbjct: 25 RKPLIAGNWKMNLNHYEAIALVQKIAFSLPDKYYDRVDVAVIPPFTDLRSVQTLVDGDKL 84
Query: 59 GFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYAL 118
AQ+ GA+TG++S L L +V++GHSERR NE + V K A AL
Sbjct: 85 RLTYGAQDLSPHDSGAYTGDVSGAFLAKLGCSYVVVGHSERRTYHNEDDALVAAKAATAL 144
Query: 119 SQGLKVIACVGETLEQREAGSTMDVVAAQTKA-----IADRVSSWSNIVLAYEPVWAIGT 173
GL I C+GE L+ REAG+ + Q + +A+++ S +V+AYEPVWAIGT
Sbjct: 145 KHGLTPIVCIGEHLDVREAGNHVAHNIEQLRGSLAGLLAEQIGS---VVIAYEPVWAIGT 201
Query: 174 GKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGISIN 215
G+VA+ A AQEV +RK L + SP IA R++YGG S+N
Sbjct: 202 GRVASAADAQEVCAAIRKELASLASPRIADTVRVLYGG-SVN 242
>pdb|2JGQ|A Chain A, Kinetics And Structural Properties Of Triosephosphate
Isomerase From Helicobacter Pylori
pdb|2JGQ|B Chain B, Kinetics And Structural Properties Of Triosephosphate
Isomerase From Helicobacter Pylori
Length = 233
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 96/170 (56%), Gaps = 15/170 (8%)
Query: 48 FLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELN 107
F GL+ +S F + QN + + GAFTGEI+++ L L+I +++GHSERR +L E
Sbjct: 42 FFGLLPNSFL-HFTLGVQNAYPRDCGAFTGEITSKHLEELKIHTLLIGHSERRTLLKESP 100
Query: 108 EFVGDKVAYALSQGLKVIACVGETLEQREAG--STMDVVAAQTKAIADRVSSWSNIVLAY 165
F+ +K + S+ K++ C+GE L RE G + + ++ Q + I ++ N+V+AY
Sbjct: 101 SFLKEKFDFFKSKNFKIVYCIGEELTTREKGFKAVKEFLSEQLENID---LNYPNLVVAY 157
Query: 166 EPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGISIN 215
EP+WAIGT K A+ H L++ L T ++YGG S+N
Sbjct: 158 EPIWAIGTKKSASLEDIYLTHGFLKQIL--------NQKTPLLYGG-SVN 198
>pdb|3S6D|A Chain A, Crystal Structure Of A Putative Triosephosphate Isomerase
From Coccidioides Immitis
Length = 310
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 76/159 (47%), Gaps = 6/159 (3%)
Query: 58 PGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYA 117
P + AQ+C+ G +TGEIS L ++ + V LGH+ERR I E ++ V K A A
Sbjct: 110 PPLLLGAQDCFWDSLGPYTGEISPVCLRDMNVSIVELGHAERRAIFGETDQQVARKAAAA 169
Query: 118 LSQGLKVIACVGE-----TLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIG 172
QGL + C+GE + G + AQ + + + + + ++ AYEPVWAIG
Sbjct: 170 ADQGLIPLVCIGEVSTLGPIVSEAIGRAVGECEAQIRPVLEALPRDAPVIFAYEPVWAIG 229
Query: 173 TGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGG 211
+ A V +R ++ RI+YGG
Sbjct: 230 KPQPARVDHVGAVVSGIRS-VIERIDRHRKGEVRILYGG 267
>pdb|1W0M|A Chain A, Triosephosphate Isomerase From Thermoproteus Tenax
pdb|1W0M|B Chain B, Triosephosphate Isomerase From Thermoproteus Tenax
pdb|1W0M|C Chain C, Triosephosphate Isomerase From Thermoproteus Tenax
pdb|1W0M|D Chain D, Triosephosphate Isomerase From Thermoproteus Tenax
pdb|1W0M|E Chain E, Triosephosphate Isomerase From Thermoproteus Tenax
pdb|1W0M|F Chain F, Triosephosphate Isomerase From Thermoproteus Tenax
pdb|1W0M|G Chain G, Triosephosphate Isomerase From Thermoproteus Tenax
pdb|1W0M|H Chain H, Triosephosphate Isomerase From Thermoproteus Tenax
Length = 226
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 39/79 (49%), Gaps = 6/79 (7%)
Query: 49 LGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNE 108
LGLV S+ V AQ V+ GGA T +S E + VIL HSE L LN+L
Sbjct: 48 LGLVSQSVD--IPVYAQGADVEAGGAHTAHVSLENIKEAGGSGVILNHSEAPLKLNDLAR 105
Query: 109 FVGDKVAYALSQGLKVIAC 127
VA A S GL V+ C
Sbjct: 106 L----VAKAKSLGLDVVVC 120
>pdb|2H6R|A Chain A, Crystal Structure Of Triosephosphate Isomerase (Tim) From
Methanocaldococcus Jannaschii
pdb|2H6R|B Chain B, Crystal Structure Of Triosephosphate Isomerase (Tim) From
Methanocaldococcus Jannaschii
pdb|2H6R|C Chain C, Crystal Structure Of Triosephosphate Isomerase (Tim) From
Methanocaldococcus Jannaschii
pdb|2H6R|D Chain D, Crystal Structure Of Triosephosphate Isomerase (Tim) From
Methanocaldococcus Jannaschii
pdb|2H6R|E Chain E, Crystal Structure Of Triosephosphate Isomerase (Tim) From
Methanocaldococcus Jannaschii
pdb|2H6R|F Chain F, Crystal Structure Of Triosephosphate Isomerase (Tim) From
Methanocaldococcus Jannaschii
pdb|2H6R|G Chain G, Crystal Structure Of Triosephosphate Isomerase (Tim) From
Methanocaldococcus Jannaschii
pdb|2H6R|H Chain H, Crystal Structure Of Triosephosphate Isomerase (Tim) From
Methanocaldococcus Jannaschii
Length = 219
Score = 32.3 bits (72), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 52/118 (44%), Gaps = 22/118 (18%)
Query: 73 GAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETL 132
G+ TG I AE + + ++ HSE+R++L ++ E V +K + GL+ I C
Sbjct: 67 GSHTGHILAEAIKDCGCKGTLINHSEKRMLLADI-EAVINKCK---NLGLETIVCTNNI- 121
Query: 133 EQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELR 190
+KA+A + S +A EP IGTG + A + V +R
Sbjct: 122 -------------NTSKAVA----ALSPDCIAVEPPELIGTGIPVSKANPEVVEGTVR 162
>pdb|1HG3|A Chain A, Crystal Structure Of Tetrameric Tim From Pyrococcus
Woesei.
pdb|1HG3|B Chain B, Crystal Structure Of Tetrameric Tim From Pyrococcus
Woesei.
pdb|1HG3|C Chain C, Crystal Structure Of Tetrameric Tim From Pyrococcus
Woesei.
pdb|1HG3|D Chain D, Crystal Structure Of Tetrameric Tim From Pyrococcus
Woesei.
pdb|1HG3|E Chain E, Crystal Structure Of Tetrameric Tim From Pyrococcus
Woesei.
pdb|1HG3|F Chain F, Crystal Structure Of Tetrameric Tim From Pyrococcus
Woesei.
pdb|1HG3|G Chain G, Crystal Structure Of Tetrameric Tim From Pyrococcus
Woesei.
pdb|1HG3|H Chain H, Crystal Structure Of Tetrameric Tim From Pyrococcus Woesei
Length = 225
Score = 29.6 bits (65), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 56/138 (40%), Gaps = 24/138 (17%)
Query: 64 AQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLK 123
AQ+ K G+ TG + E + +L HSE R+IL +L
Sbjct: 64 AQHIDPIKPGSHTGHVLPEAVKEAGAVGTLLNHSENRMILADLE---------------- 107
Query: 124 VIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQ 183
+ + E M +V + A++ V++ + +A EP IGTG + A+ +
Sbjct: 108 ------AAIRRAEEVGLMTMVCSNNPAVSAAVAALNPDYVAVEPPELIGTGIPVSKAKPE 161
Query: 184 EVHFELRKWLLANTSPEI 201
+ + L+ +PE+
Sbjct: 162 VITNTVE--LVKKVNPEV 177
>pdb|3MPO|A Chain A, The Crystal Structure Of A Hydrolase From Lactobacillus
Brevis
pdb|3MPO|B Chain B, The Crystal Structure Of A Hydrolase From Lactobacillus
Brevis
pdb|3MPO|C Chain C, The Crystal Structure Of A Hydrolase From Lactobacillus
Brevis
pdb|3MPO|D Chain D, The Crystal Structure Of A Hydrolase From Lactobacillus
Brevis
Length = 279
Score = 28.1 bits (61), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 3/34 (8%)
Query: 102 ILNELNEFVG---DKVAYALSQGLKVIACVGETL 132
+LNE NE D V A +QG+KV+ C G L
Sbjct: 16 LLNEKNELAQATIDAVQAAKAQGIKVVLCTGRPL 49
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.135 0.411
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,327,162
Number of Sequences: 62578
Number of extensions: 221228
Number of successful extensions: 665
Number of sequences better than 100.0: 90
Number of HSP's better than 100.0 without gapping: 89
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 451
Number of HSP's gapped (non-prelim): 92
length of query: 237
length of database: 14,973,337
effective HSP length: 96
effective length of query: 141
effective length of database: 8,965,849
effective search space: 1264184709
effective search space used: 1264184709
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 50 (23.9 bits)