BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026529
(237 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q7Z419|R144B_HUMAN E3 ubiquitin-protein ligase RNF144B OS=Homo sapiens GN=RNF144B PE=1
SV=1
Length = 303
Score = 62.8 bits (151), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 85/206 (41%), Gaps = 13/206 (6%)
Query: 20 ENPRQEEIKEEELEDIDGTFTCDICIEPMSVNNKFKNNNLCTHPFCQDCTAKYIEVKVRD 79
ENP ++ L TC +C+ S++ K C FC C +Y+++ +R+
Sbjct: 15 ENPTPGDLAPAPL------ITCKLCLCEQSLD-KMTTLQECQCIFCTACLKQYMQLAIRE 67
Query: 80 NNTAKIECPGLHC--EQFLDPLACKPTIPSSLFIKWCDHLCEDYV-LGLERSYCPNRNCM 136
+ I CP + C L +P F + E V L R++CP +C
Sbjct: 68 GCGSPITCPDMVCLNHGTLQEAEIACLVPVDQFQLYQRLKFEREVHLDPYRTWCPVADCQ 127
Query: 137 AVMVNECEEIGRVKKAQCPKCKQWFCFQCKLAWHAGYRCEESGN--LRDRNDIAFGKLLE 194
V + G+ +CP C FC CK AWHA C +S L + FG E
Sbjct: 128 TVCPVASSDPGQPVLVECPSCHLKFCSCCKDAWHAEVSCRDSQPIVLPTEHRALFGTDAE 187
Query: 195 KMNWTRCPGCGNCIERKKGCRIMFCR 220
+CP C IER +GC M C+
Sbjct: 188 A-PIKQCPVCRVYIERNEGCAQMMCK 212
>sp|A5PK27|R144B_BOVIN E3 ubiquitin-protein ligase RNF144B OS=Bos taurus GN=RNF144B PE=2
SV=1
Length = 304
Score = 62.8 bits (151), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 86/207 (41%), Gaps = 13/207 (6%)
Query: 19 KENPRQEEIKEEELEDIDGTFTCDICIEPMSVNNKFKNNNLCTHPFCQDCTAKYIEVKVR 78
ENP ++ L TC +C+ S++ K C FC C +Y+++ +R
Sbjct: 15 AENPTPGDLALVPL------VTCKLCLCEQSLD-KMTTLQECRCIFCTACLKQYMQLAIR 67
Query: 79 DNNTAKIECPGLHC--EQFLDPLACKPTIPSSLFIKWCDHLCEDYV-LGLERSYCPNRNC 135
+ + I CP + C L +P F + E V L R++CP +C
Sbjct: 68 EGCGSPITCPDMVCLNHGTLQEAEIACLVPVDQFQLYQRLKFEREVHLDPCRTWCPVADC 127
Query: 136 MAVMVNECEEIGRVKKAQCPKCKQWFCFQCKLAWHAGYRCEES--GNLRDRNDIAFGKLL 193
V + G+ +CP C FC CK AWHA C +S G L + FG
Sbjct: 128 QTVCPVATSDPGQPVLVECPSCHLKFCSCCKDAWHAEVSCRDSQPGILPTEHGTLFGTET 187
Query: 194 EKMNWTRCPGCGNCIERKKGCRIMFCR 220
+ +CP C IER +GC M C+
Sbjct: 188 DA-PIKQCPVCRVYIERNEGCAQMMCK 213
>sp|P50876|R144A_HUMAN Probable E3 ubiquitin-protein ligase RNF144A OS=Homo sapiens
GN=RNF144A PE=1 SV=2
Length = 292
Score = 62.4 bits (150), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 86/212 (40%), Gaps = 10/212 (4%)
Query: 35 IDGTFTCDICIEPMSVNNKFKNNNLCTHPFCQDCTAKYIEVKVRDNNTAKIECPGLHC-- 92
+D +C +C+ V + C FC C +Y+E+ +++ I CP C
Sbjct: 14 LDPLVSCKLCLGEYPVE-QMTTIAQCQCIFCTLCLKQYVELLIKEGLETAISCPDAACPK 72
Query: 93 EQFLDPLACKPTIPSSLFIKWCDHLCEDYVLGLE-RSYCPNRNCMAVMVNECEEIGRVKK 151
+ L + + + + ++ E VL R++CP C AV + + +
Sbjct: 73 QGHLQENEIECMVAAEIMQRYKKLQFEREVLFDPCRTWCPASTCQAVCQLQDVGLQTPQP 132
Query: 152 AQCPKCKQWFCFQCKLAWHAGYRCEES---GNLRDRNDIAFGKLLEKMNWTRCPGCGNCI 208
QC C+ FC CK +WH G C E+ L AF + RCP C I
Sbjct: 133 VQCKACRMEFCSTCKASWHPGQGCPETMPITFLPGETSAAFKMEEDDAPIKRCPKCKVYI 192
Query: 209 ERKKGCRIMF---CRFIFLSLCLCIFSNRYLL 237
ER +GC M C+ F CL + +LL
Sbjct: 193 ERDEGCAQMMCKNCKHAFCWYCLESLDDDFLL 224
>sp|A4IIY1|R144A_XENTR Probable E3 ubiquitin-protein ligase RNF144A OS=Xenopus tropicalis
GN=rnf144a PE=2 SV=1
Length = 292
Score = 62.4 bits (150), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 91/212 (42%), Gaps = 10/212 (4%)
Query: 35 IDGTFTCDICIEPMSVNNKFKNNNLCTHPFCQDCTAKYIEVKVRDNNTAKIECPGLHCEQ 94
++ +C +C+ +V + C FC C +Y+E+ +++ I CP C +
Sbjct: 14 LEPLVSCKLCLGEYTVE-QMTTIAQCQCIFCTLCLKQYVELLIKEGLETAISCPDASCPK 72
Query: 95 --FLDPLACKPTIPSSLFIKWCDHLCE-DYVLGLERSYCPNRNCMAVMVNECEEIGRVKK 151
L + + + + K+ E + +L R++CP+ +C AV + + I +
Sbjct: 73 RGHLQENEIECMVAAEIMQKYKKLQFEKEILLDPCRTWCPSSSCQAVCKLQEKGIQNPQL 132
Query: 152 AQCPKCKQWFCFQCKLAWHAGYRCEESGN---LRDRNDIAFGKLLEKMNWTRCPGCGNCI 208
QC C FC CK WH G C E+ L + F L + + RCP C I
Sbjct: 133 VQCSACDIEFCSACKANWHPGQGCPENMAITFLPGDSSSFFKSLEDDVPIKRCPKCKVYI 192
Query: 209 ERKKGCRIMF---CRFIFLSLCLCIFSNRYLL 237
ER +GC M C+ F CL + +LL
Sbjct: 193 ERDEGCAQMMCKNCKHAFCWYCLESLDDDFLL 224
>sp|Q4KLT0|RN217_XENLA Probable E3 ubiquitin-protein ligase RNF217 OS=Xenopus laevis
GN=rnf217 PE=2 SV=1
Length = 282
Score = 60.5 bits (145), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 82/201 (40%), Gaps = 40/201 (19%)
Query: 39 FTCDICIEPMSVNNKFKNNNLCTHPFCQDCTAKYIEVKVRDNNTAKIECPGLHCEQFLDP 98
+C +C+E S+ K C P C +C +Y+ +V+ A+I+CP C + LD
Sbjct: 1 MSCRVCLEDRSI----KPLPCCKKPVCDECLKRYLSSQVQLGQ-AEIQCPITECNKHLDE 55
Query: 99 LACKPTIPSSLFIKWCDHLCEDYVLGLERSYCPNRNCMAVMVNECEEIGRVK-------- 150
++P IK+ Y L L R + C +C+ K
Sbjct: 56 STILYSLPHDDIIKY------KYFLELSRMDSSTKPC-----PQCKHFTTFKRKTHIPNP 104
Query: 151 -------KAQCPKCKQWFCFQCKLAWHAGYRCEESGN----LRD-RNDIAFGKLLEKMNW 198
K QCP C+ +CF+C WH G C E LR N+I G + N
Sbjct: 105 TKSENKLKIQCPSCQFIWCFRCHAPWHEGVNCREYKKGDKLLRHWANEIEHG----QRNA 160
Query: 199 TRCPGCGNCIERKKGCRIMFC 219
+CP C I+R +GC M C
Sbjct: 161 QKCPRCKVHIQRTEGCDHMTC 181
>sp|Q8BKD6|R144B_MOUSE E3 ubiquitin-protein ligase RNF144B OS=Mus musculus GN=Rnf144b PE=2
SV=2
Length = 301
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 86/215 (40%), Gaps = 11/215 (5%)
Query: 9 IENRQSPRQEKENPRQEEIKEEELEDIDGTFTCDICIEPMSVNNKFKNNNLCTHPFCQDC 68
++ Q ENP ++ L TC +C+ S++ K C FC C
Sbjct: 4 VDGLQCLTMTAENPPSGDLIPAPL------VTCKLCLCEQSLD-KMTMLQECQCIFCTPC 56
Query: 69 TAKYIEVKVRDNNTAKIECPGLHC--EQFLDPLACKPTIPSSLFIKWCDHLCEDYV-LGL 125
+Y+ + +R+ + I CP + C L +P F + E V +
Sbjct: 57 LKQYMVLSIREGCGSPITCPDMVCLNHGTLQETEIACLVPLDEFQLYQRLKFEREVHMDP 116
Query: 126 ERSYCPNRNCMAVMVNECEEIGRVKKAQCPKCKQWFCFQCKLAWHAGYRCEESGNLRDRN 185
R++CP +C V + G+ +CP C FC CK AWH C +S + +
Sbjct: 117 LRTWCPVADCQTVCHISAGDPGQPVLVECPSCHLKFCSCCKDAWHEESSCRDSQSAMPEH 176
Query: 186 DIAFGKLLEKMNWTRCPGCGNCIERKKGCRIMFCR 220
FG + +CP C IER +GC M C+
Sbjct: 177 GALFGTDADA-PIKQCPVCRIYIERNEGCAQMMCK 210
>sp|Q9Z1K6|ARI2_MOUSE E3 ubiquitin-protein ligase ARIH2 OS=Mus musculus GN=Arih2 PE=2
SV=1
Length = 492
Score = 58.9 bits (141), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 90/228 (39%), Gaps = 33/228 (14%)
Query: 2 GNSLQKPIENRQSPRQEKENPRQEEIKEEELEDIDGTFTCDICIEPMSVNNKFKNNNLCT 61
NS Q +E R P K P C +C++ + N + C
Sbjct: 110 SNSAQLLVEARVQPNPSKHVPTAH-----------PPHHCAVCMQFVRKENLL--SLACQ 156
Query: 62 HPFCQDCTAKYIEVKVRDNNTAKIECPGLHC-----EQFLDPLACKPTIPSS-LFIKWCD 115
H FC+ C ++ V V+D I C C E F+ PL +P+ L K+
Sbjct: 157 HQFCRSCWEQHCSVLVKDGVGVGISCMAQDCPLRTPEDFVFPL-----LPNEELRDKYRR 211
Query: 116 HLCEDYVLG-LERSYCPNRNC-MAVMVNECEEIGRVKKAQCPKCKQWFCFQCKLAWHAGY 173
+L DYV + CP +C M + V E R ++ QC +C + FCF+C+ +HA
Sbjct: 212 YLFRDYVESHFQLQLCPGADCPMVIRVQE----PRARRVQCNRCSEVFCFKCRQMYHAPT 267
Query: 174 RCEESGNLRDR--NDIAFGKLLEKMNWTRCPGCGNCIERKKGCRIMFC 219
C + +D + CP C CIE+ GC M C
Sbjct: 268 DCATIRKWLTKCADDSETANYISAHT-KDCPKCNICIEKNGGCNHMQC 314
>sp|O76924|ARI2_DROME Protein ariadne-2 OS=Drosophila melanogaster GN=ari-2 PE=2 SV=1
Length = 509
Score = 57.8 bits (138), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 70/168 (41%), Gaps = 16/168 (9%)
Query: 60 CTHPFCQDCTAKYIEVKVRDNNTAKIECPGLHC-----EQFLDPLACKPTIPSSLFIKWC 114
C H FC+DC Y E ++ + +I C C E + L +P + K+
Sbjct: 170 CGHSFCKDCWTIYFETQIFQGISTQIGCMAQMCNVRVPEDLVLTLVTRPVMRD----KYQ 225
Query: 115 DHLCEDYVLGL-ERSYCPNRNCMAVMVNECEEIGRVKKAQCPKCKQWFCFQCKLAWHAGY 173
+DYV E +CP NC ++ + EI K+A C C FCF+C + +HA
Sbjct: 226 QFAFKDYVKSHPELRFCPGPNCQIIV--QSSEIS-AKRAICKACHTGFCFRCGMDYHAPT 282
Query: 174 RCEESGNLRDR--NDIAFGKLLEKMNWTRCPGCGNCIERKKGCRIMFC 219
C+ + +D + CP C CIE+ GC M C
Sbjct: 283 DCQVIKKWLTKCADDSETANYISAHT-KDCPKCHICIEKNGGCNHMQC 329
>sp|O95376|ARI2_HUMAN E3 ubiquitin-protein ligase ARIH2 OS=Homo sapiens GN=ARIH2 PE=1
SV=1
Length = 493
Score = 57.8 bits (138), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 90/228 (39%), Gaps = 33/228 (14%)
Query: 2 GNSLQKPIENRQSPRQEKENPRQEEIKEEELEDIDGTFTCDICIEPMSVNNKFKNNNLCT 61
NS Q +E R P K P C +C++ + N + C
Sbjct: 111 SNSAQLLVEARVQPNPSKHVPTSH-----------PPHHCAVCMQFVRKENLL--SLACQ 157
Query: 62 HPFCQDCTAKYIEVKVRDNNTAKIECPGLHC-----EQFLDPLACKPTIPSS-LFIKWCD 115
H FC+ C ++ V V+D + C C E F+ PL +P+ L K+
Sbjct: 158 HQFCRSCWEQHCSVLVKDGVGVGVSCMAQDCPLRTPEDFVFPL-----LPNEELREKYRR 212
Query: 116 HLCEDYVLG-LERSYCPNRNC-MAVMVNECEEIGRVKKAQCPKCKQWFCFQCKLAWHAGY 173
+L DYV + CP +C M + V E R ++ QC +C + FCF+C+ +HA
Sbjct: 213 YLFRDYVESHYQLQLCPGADCPMVIRVQE----PRARRVQCNRCNEVFCFKCRQMYHAPT 268
Query: 174 RCEESGNLRDR--NDIAFGKLLEKMNWTRCPGCGNCIERKKGCRIMFC 219
C + +D + CP C CIE+ GC M C
Sbjct: 269 DCATIRKWLTKCADDSETANYISAHT-KDCPKCNICIEKNGGCNHMQC 315
>sp|Q6DH94|R1442_DANRE Probable E3 ubiquitin-protein ligase RNF144A-B OS=Danio rerio
GN=rnf144ab PE=2 SV=1
Length = 293
Score = 57.0 bits (136), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 86/215 (40%), Gaps = 13/215 (6%)
Query: 34 DIDGTFTCDICIEPMSVNNKFKNNNLCTHPFCQDCTAKYIEVKVRDNNTAKIECPGLHCE 93
D+ +C +C+ + + + C FC C +Y+E+ +++ I CP C
Sbjct: 13 DLAPLLSCKLCLGEFPLE-QMTTISQCQCIFCSLCLKQYVELLIKEGLETAISCPDSACP 71
Query: 94 Q----FLDPLACKPTIPSSLFIKWCDHLCEDYVLGLERSYCPNRNCMAVMVNECEEIGRV 149
+ + + C K + +L R++CP+ +C AV E+
Sbjct: 72 KQGHLLENEIECMVAGEVMQHYKRLQFE-REVLLDPCRTWCPSSSCQAVCQLNEAEVQLP 130
Query: 150 KKAQCPKCKQWFCFQCKLAWHAGYRCEE----SGNLRDRNDIAFGKLLEKMNWTRCPGCG 205
+ QCP+C FC C+ H G C+E + L N ++ RCP C
Sbjct: 131 QPVQCPECSLRFCSACRADCHTGQACQEMLPITTFLPGENGSNLKSQEDEAPIKRCPKCK 190
Query: 206 NCIERKKGCRIMF---CRFIFLSLCLCIFSNRYLL 237
IER +GC M C+ F CL + +LL
Sbjct: 191 VYIERDEGCAQMMCKNCKHAFCWYCLESLDDDFLL 225
>sp|Q5RFV4|R1441_DANRE Probable E3 ubiquitin-protein ligase RNF144A-A OS=Danio rerio
GN=rnf144aa PE=3 SV=1
Length = 293
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 87/213 (40%), Gaps = 11/213 (5%)
Query: 35 IDGTFTCDICIEPMSVNNKFKNNNLCTHPFCQDCTAKYIEVKVRDNNTAKIECPGLHCEQ 94
+D +C +C+ + + C FC C +Y+E+ +++ I CP C +
Sbjct: 14 LDPLVSCKLCLGEFPLE-QMTTITQCQCVFCTMCLKQYVELLIKEGFETAISCPDSACPK 72
Query: 95 --FLDPLACKPTIPSSLFIKWCDHLCE-DYVLGLERSYCPNRNCMAVMVNECEEIGRVKK 151
L + + + + ++ E + +L R++CP+ C AV + + +
Sbjct: 73 RGHLQENEIECMVATEIMQRYRKLQFEKEVLLDPSRTWCPSSTCQAVCQLKESDTVLPQL 132
Query: 152 AQCPKCKQWFCFQCKLAWHAGYRCEE----SGNLRDRNDIAFGKLLEKMNWTRCPGCGNC 207
+C C FC CK +WH C+E + L + F + RCP C
Sbjct: 133 VRCSVCTLEFCSACKASWHPDQDCQENVPITSFLPGESSSFFKADDDDAPIKRCPKCKVY 192
Query: 208 IERKKGCRIMF---CRFIFLSLCLCIFSNRYLL 237
IER +GC M C+ F CL + +LL
Sbjct: 193 IERDEGCAQMMCKNCKHAFCWYCLESLDDDFLL 225
>sp|Q925F3|R144A_MOUSE Probable E3 ubiquitin-protein ligase RNF144A OS=Mus musculus
GN=Rnf144a PE=1 SV=1
Length = 292
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 82/212 (38%), Gaps = 10/212 (4%)
Query: 35 IDGTFTCDICIEPMSVNNKFKNNNLCTHPFCQDCTAKYIEVKVRDNNTAKIECPGLHC-- 92
+D +C +C+ + C FC C +Y+E+ +++ I CP C
Sbjct: 14 LDPLVSCKLCLGEYPAE-QMTTIAQCQCIFCTLCLKQYVELLIKEGLETAISCPDAACPK 72
Query: 93 EQFLDPLACKPTIPSSLFIKWCDHLCEDYVLGLE-RSYCPNRNCMAVMVNECEEIGRVKK 151
+ L + + + + ++ E VL R++CP C AV + + +
Sbjct: 73 QGHLQENEIECMVAAEIMQRYKKLQFEREVLFDPCRTWCPASTCQAVCQLQDIGLQTPQL 132
Query: 152 AQCPKCKQWFCFQCKLAWHAGYRCEES---GNLRDRNDIAFGKLLEKMNWTRCPGCGNCI 208
QC C FC CK WH G C E+ L AF RCP C I
Sbjct: 133 VQCKACDMEFCSACKARWHPGQGCPETMPITFLPGETSSAFKMEEGDAPIKRCPKCRVYI 192
Query: 209 ERKKGCRIMF---CRFIFLSLCLCIFSNRYLL 237
ER +GC M C+ F CL + +LL
Sbjct: 193 ERDEGCAQMMCKNCKHAFCWYCLESLDDDFLL 224
>sp|Q9UBS8|RNF14_HUMAN E3 ubiquitin-protein ligase RNF14 OS=Homo sapiens GN=RNF14 PE=1
SV=1
Length = 474
Score = 53.9 bits (128), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 73/189 (38%), Gaps = 33/189 (17%)
Query: 60 CTHPFCQDCTAKYIEVKVRDNNTAKIECPGLHCEQFLDPLACKPTIPSSLFIKWCDHLCE 119
C H +C+ C Y E+++RD + CP C P K + + LF ++ L +
Sbjct: 238 CRHVYCKACLKDYFEIQIRDGQVQCLNCPEPKCPSVATPGQVKELVEAELFARYDRLLLQ 297
Query: 120 DYV-LGLERSYCPNRNCMAVMVNECEEIGRVKKAQCPKCKQWFCFQCKLAWHAGYRCEES 178
+ L + YCP C ++ E C C FC C+L +H C+ +
Sbjct: 298 SSLDLMADVVYCPRPCCQLPVMQE----PGCTMGICSSCNFAFCTLCRLTYHGVSPCKVT 353
Query: 179 G----NLRDRN-----------DIAFG-----KLLEKM--------NWTRCPGCGNCIER 210
+LR+ D +G K LE+M N CP CG IE+
Sbjct: 354 AEKLMDLRNEYLQADEANKRLLDQRYGKRVIQKALEEMESKEWLEKNSKSCPCCGTPIEK 413
Query: 211 KKGCRIMFC 219
GC M C
Sbjct: 414 LDGCNKMTC 422
>sp|Q9LVX0|ARI3_ARATH Probable E3 ubiquitin-protein ligase ARI3 OS=Arabidopsis thaliana
GN=ARI3 PE=2 SV=1
Length = 537
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 79/202 (39%), Gaps = 38/202 (18%)
Query: 38 TFTCDICIE---PMSVNNKFKNNNLCTHPFCQDCTAKYIEVKVRDNNTAKIECPGLHCEQ 94
T CD+C+E P +V + + C H FC DC + VK+ + + +I C C+
Sbjct: 118 TMKCDVCMEDDLPSNVMTRME----CGHRFCNDCWIGHFTVKINEGESKRILCMAHECKA 173
Query: 95 FLDPLACKPTIPSSLFIKWCDHLCEDYVLGLER-SYCPNRNCMAVMVNECEEIGRVKKAQ 153
D + + L ++ L E YV +CP++ + + E+ V +
Sbjct: 174 ICDEDVVRKLVSPELADRYDRFLIESYVEDNNMVKWCPSKPHCGSAIRKIEDGHDVVEVG 233
Query: 154 CPKCKQWFCFQCKLAWHA----------GYRCEESGNLRDRNDIAFGKLLEKMNWTR--- 200
C C FCF C H+ +CE+ E +NW
Sbjct: 234 CS-CGLQFCFSCLSESHSPCSCLMWKLWKKKCEDES--------------ETVNWITVNT 278
Query: 201 --CPGCGNCIERKKGCRIMFCR 220
CP C I+++ GC +M C+
Sbjct: 279 KLCPKCSKPIQKRDGCNLMTCK 300
>sp|Q9Y4X5|ARI1_HUMAN E3 ubiquitin-protein ligase ARIH1 OS=Homo sapiens GN=ARIH1 PE=1
SV=2
Length = 557
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 75/184 (40%), Gaps = 10/184 (5%)
Query: 41 CDICIEPMSVNNKFKNNNLCTHPFCQDCTAKYIEVKVRDNNTAK-IECPGLHCEQFLDPL 99
C IC ++ N + C H FC C ++Y+ K+ + + I CP C+ +D
Sbjct: 186 CQICY--LNYPNSYFTGLECGHKFCMQCWSEYLTTKIMEEGMGQTISCPAHGCDILVDDN 243
Query: 100 ACKPTIPSSLFIKWCDHLCEDYVLGLER--SYCPNRNCMAVMVNECEEIGRVKKAQCPKC 157
I S HL + + R +CP +C V+ + + K +C KC
Sbjct: 244 TVMRLITDSKVKLKYQHLITNSFVECNRLLKWCPAPDCHHVVKVQYPD---AKPVRC-KC 299
Query: 158 KQWFCFQCKLAWHAGYRCEESGN-LRDRNDIAFGKLLEKMNWTRCPGCGNCIERKKGCRI 216
+ FCF C WH +C+ ++ +D + N CP C IE+ GC
Sbjct: 300 GRQFCFNCGENWHDPVKCKWLKKWIKKCDDDSETSNWIAANTKECPKCHVTIEKDGGCNH 359
Query: 217 MFCR 220
M CR
Sbjct: 360 MVCR 363
>sp|Q9Z1K5|ARI1_MOUSE E3 ubiquitin-protein ligase ARIH1 OS=Mus musculus GN=Arih1 PE=2
SV=3
Length = 555
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 75/184 (40%), Gaps = 10/184 (5%)
Query: 41 CDICIEPMSVNNKFKNNNLCTHPFCQDCTAKYIEVKVRDNNTAK-IECPGLHCEQFLDPL 99
C IC ++ N + C H FC C ++Y+ K+ + + I CP C+ +D
Sbjct: 184 CQICY--LNYPNSYFTGLECGHKFCMQCWSEYLTTKIMEEGMGQTISCPAHGCDILVDDN 241
Query: 100 ACKPTIPSSLFIKWCDHLCEDYVLGLER--SYCPNRNCMAVMVNECEEIGRVKKAQCPKC 157
I S HL + + R +CP +C V+ + + K +C KC
Sbjct: 242 TVMRLITDSKVKLKYQHLITNSFVECNRLLKWCPAPDCHHVVKVQYPD---AKPVRC-KC 297
Query: 158 KQWFCFQCKLAWHAGYRCEESGN-LRDRNDIAFGKLLEKMNWTRCPGCGNCIERKKGCRI 216
+ FCF C WH +C+ ++ +D + N CP C IE+ GC
Sbjct: 298 GRQFCFNCGENWHDPVKCKWLKKWIKKCDDDSETSNWIAANTKECPKCHVTIEKDGGCNH 357
Query: 217 MFCR 220
M CR
Sbjct: 358 MVCR 361
>sp|A2VEA3|ARI1_BOVIN E3 ubiquitin-protein ligase ARIH1 OS=Bos taurus GN=ARIH1 PE=2 SV=1
Length = 555
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 75/184 (40%), Gaps = 10/184 (5%)
Query: 41 CDICIEPMSVNNKFKNNNLCTHPFCQDCTAKYIEVKVRDNNTAK-IECPGLHCEQFLDPL 99
C IC ++ N + C H FC C ++Y+ K+ + + I CP C+ +D
Sbjct: 184 CQICY--LNYPNSYFTGLECGHKFCMQCWSEYLTTKIMEEGMGQTISCPAHGCDILVDDN 241
Query: 100 ACKPTIPSSLFIKWCDHLCEDYVLGLER--SYCPNRNCMAVMVNECEEIGRVKKAQCPKC 157
I S HL + + R +CP +C V+ + + K +C KC
Sbjct: 242 TVMRLITDSKVKLKYQHLITNSFVECNRLLKWCPAPDCHHVVKVQYPD---AKPVRC-KC 297
Query: 158 KQWFCFQCKLAWHAGYRCEESGN-LRDRNDIAFGKLLEKMNWTRCPGCGNCIERKKGCRI 216
+ FCF C WH +C+ ++ +D + N CP C IE+ GC
Sbjct: 298 GRQFCFNCGENWHDPVKCKWLKKWIKKCDDDSETSNWIAANTKECPKCHVTIEKDGGCNH 357
Query: 217 MFCR 220
M CR
Sbjct: 358 MVCR 361
>sp|Q9JI90|RNF14_MOUSE E3 ubiquitin-protein ligase RNF14 OS=Mus musculus GN=Rnf14 PE=2
SV=2
Length = 485
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 73/190 (38%), Gaps = 35/190 (18%)
Query: 60 CTHPFCQDCTAKYIEVKVRDNNTAKIECPGLHCEQFLDPLACKPTIPSSLFIKWCDHLCE 119
C H +C+ C Y E++++D + CP C P K + + LF ++ D L
Sbjct: 239 CKHVYCKACLKDYFEIQIKDGQVKCLNCPEPQCPSVATPGQVKELVEADLFARY-DRLLL 297
Query: 120 DYVLGL--ERSYCPNRNCMAVMVNECEEIGRVKKAQCPKCKQWFCFQCKLAWHAGYRCEE 177
L L + YCP C ++ E A C C FC C+L +H C+
Sbjct: 298 QSTLDLMADVVYCPRPCCQLPVMQE----PGGTMAICSSCNFAFCTLCRLTYHGLSPCKV 353
Query: 178 SG----NLRD---RNDIAFGKLLEK---------------------MNWTRCPGCGNCIE 209
+ +LR+ + D A + LE+ N CP CG I+
Sbjct: 354 TAEKLIDLRNEYLQADEATKRFLEQRYGKRVIQKALEEMESKDWLEKNSKSCPCCGTPIQ 413
Query: 210 RKKGCRIMFC 219
+ GC M C
Sbjct: 414 KLDGCNKMTC 423
>sp|B1H1E4|ARI1_XENTR E3 ubiquitin-protein ligase arih1 OS=Xenopus tropicalis GN=arih1
PE=2 SV=1
Length = 529
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 75/184 (40%), Gaps = 10/184 (5%)
Query: 41 CDICIEPMSVNNKFKNNNLCTHPFCQDCTAKYIEVKVRDNNTAK-IECPGLHCEQFLDPL 99
C IC ++ N + C H FC C ++Y+ K+ + + I CP C+ +D
Sbjct: 158 CQICY--LNYPNSYFTGLECGHKFCMQCWSEYLTTKIIEEGMGQTISCPAHGCDILVDDN 215
Query: 100 ACKPTIPSSLFIKWCDHLCEDYVLGLER--SYCPNRNCMAVMVNECEEIGRVKKAQCPKC 157
I S HL + + R +CP +C V+ + + K +C KC
Sbjct: 216 TVMRLITDSKVKLKYQHLITNSFVECNRLLKWCPAPDCHHVVKVQYPD---AKPVRC-KC 271
Query: 158 KQWFCFQCKLAWHAGYRCEESGN-LRDRNDIAFGKLLEKMNWTRCPGCGNCIERKKGCRI 216
+ FCF C WH +C+ ++ +D + N CP C IE+ GC
Sbjct: 272 GRQFCFNCGENWHDPVKCKWLKKWIKKCDDDSETSNWIAANTKECPKCHVTIEKDGGCNH 331
Query: 217 MFCR 220
M CR
Sbjct: 332 MVCR 335
>sp|Q6NW85|ARI1L_DANRE E3 ubiquitin-protein ligase arih1l OS=Danio rerio GN=arih1l PE=2
SV=1
Length = 533
Score = 52.4 bits (124), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 74/184 (40%), Gaps = 10/184 (5%)
Query: 41 CDICIEPMSVNNKFKNNNLCTHPFCQDCTAKYIEVKVRDNNTAK-IECPGLHCEQFLDPL 99
C IC ++ N + C H FC C Y+ K+ + + I CP +C+ +D
Sbjct: 162 CQICY--LNYPNSYFTGLECGHKFCMQCWGDYLTTKIIEEGMGQTISCPAHNCDILVDDN 219
Query: 100 ACKPTIPSSLFIKWCDHLCEDYVLGLER--SYCPNRNCMAVMVNECEEIGRVKKAQCPKC 157
I S HL + + R +CP +C V+ + + K +C KC
Sbjct: 220 TVMRLITDSKVKLKYQHLITNSFVECNRLLKWCPAPDCHHVVKVQYPD---AKPVRC-KC 275
Query: 158 KQWFCFQCKLAWHAGYRCEESGN-LRDRNDIAFGKLLEKMNWTRCPGCGNCIERKKGCRI 216
+ FCF C WH +C+ ++ +D + N CP C IE+ GC
Sbjct: 276 GRQFCFNCGENWHDPVKCKWLRKWIKKCDDDSETSNWIAANTKECPKCHVTIEKDGGCNH 335
Query: 217 MFCR 220
M CR
Sbjct: 336 MVCR 339
>sp|Q32NS4|ARI1_XENLA E3 ubiquitin-protein ligase arih1 OS=Xenopus laevis GN=arih1 PE=2
SV=1
Length = 529
Score = 52.4 bits (124), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 73/184 (39%), Gaps = 10/184 (5%)
Query: 41 CDICIEPMSVNNKFKNNNLCTHPFCQDCTAKYIEVKVRDNNTAK-IECPGLHCEQFLDPL 99
C IC ++ N + C H FC C +Y+ K+ + + I CP C+ +D
Sbjct: 158 CQICY--LNYPNSYFTGLECGHKFCMQCWGEYLTTKIIEEGMGQTISCPAHGCDILVDDN 215
Query: 100 ACKPTIPSSLFIKWCDHLCEDYVLGLER--SYCPNRNCMAVMVNECEEIGRVKKAQCPKC 157
I S HL + + R +CP +C V+ + + K C KC
Sbjct: 216 TVMRLITDSKVKLKYQHLITNSFVECNRLLKWCPAPDCHHVVKVQYPD---AKPVHC-KC 271
Query: 158 KQWFCFQCKLAWHAGYRCEESGN-LRDRNDIAFGKLLEKMNWTRCPGCGNCIERKKGCRI 216
+ FCF C WH +C+ ++ +D + N CP C IE+ GC
Sbjct: 272 GRQFCFNCGENWHDPVKCKWLRKWIKKCDDDSETSNWIAANTKECPKCHVTIEKDGGCNH 331
Query: 217 MFCR 220
M CR
Sbjct: 332 MVCR 335
>sp|Q6PFJ9|ARI1_DANRE E3 ubiquitin-protein ligase arih1 OS=Danio rerio GN=arih1 PE=2 SV=1
Length = 527
Score = 52.0 bits (123), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 73/184 (39%), Gaps = 10/184 (5%)
Query: 41 CDICIEPMSVNNKFKNNNLCTHPFCQDCTAKYIEVKVRDNNTAK-IECPGLHCEQFLDPL 99
C IC ++ N + C H FC C Y+ K+ + + I CP C+ +D
Sbjct: 156 CQICY--LNYPNSYFTGLECGHKFCMQCWGDYLTTKIIEEGMGQTISCPAHSCDILVDDN 213
Query: 100 ACKPTIPSSLFIKWCDHLCEDYVLGLER--SYCPNRNCMAVMVNECEEIGRVKKAQCPKC 157
I S HL + + R +CP +C V+ + + K +C KC
Sbjct: 214 TVMRLITDSKVKLKYQHLITNSFVECNRLLKWCPAPDCHHVVKVQYPD---AKPVRC-KC 269
Query: 158 KQWFCFQCKLAWHAGYRCEESGN-LRDRNDIAFGKLLEKMNWTRCPGCGNCIERKKGCRI 216
+ FCF C WH +C+ ++ +D + N CP C IE+ GC
Sbjct: 270 GRQFCFNCGENWHDPVKCKWLRKWIKKCDDDSETSNWIAANTKECPKCHVTIEKDGGCNH 329
Query: 217 MFCR 220
M CR
Sbjct: 330 MVCR 333
>sp|Q8IWT3|CUL9_HUMAN Cullin-9 OS=Homo sapiens GN=CUL9 PE=1 SV=2
Length = 2517
Score = 52.0 bits (123), Expect = 3e-06, Method: Composition-based stats.
Identities = 45/194 (23%), Positives = 72/194 (37%), Gaps = 24/194 (12%)
Query: 41 CDICIEPMSVNNKFKNNNLCTHPFCQDCTAKYIEVKVRDNNTAKIECPGLHCEQ-----F 95
C +C+ P+ ++ + C H C+ C +Y+ ++ N CP C F
Sbjct: 2070 CPVCVSPLGCDDDLPSL-CCMHYCCKSCWNEYLTTRIEQNLVLNCTCPIADCPAQPTGAF 2128
Query: 96 LDPLACKPTIPSSLFIKWCDHLCEDYVLGLER-SYCPN-RNCMAVMVNECEEIGRVKKAQ 153
+ + P + S K+ L YV ++C N + C ++ + G
Sbjct: 2129 IRAIVSSPEVIS----KYEKALLRGYVESCSNLTWCTNPQGCDRILCRQGLGCG----TT 2180
Query: 154 CPKCKQWFCFQCKL--------AWHAGYRCEESGNLRDRNDIAFGKLLEKMNWTRCPGCG 205
C KC CF C H ++ G + A K L K+ RCP C
Sbjct: 2181 CSKCGWASCFNCSFPEAHYPASCGHMSQWVDDGGYYDGMSVEAQSKHLAKLISKRCPSCQ 2240
Query: 206 NCIERKKGCRIMFC 219
IE+ +GC M C
Sbjct: 2241 APIEKNEGCLHMTC 2254
>sp|Q6T486|RBRA_DICDI Probable E3 ubiquitin-protein ligase rbrA OS=Dictyostelium
discoideum GN=rbrA PE=3 SV=1
Length = 520
Score = 48.9 bits (115), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 80/190 (42%), Gaps = 11/190 (5%)
Query: 37 GTFTCDICIEPMSVNNKFKNNNLCTHPFCQDCTAKYIEVKVRDNNT-AKIECPGLHCEQF 95
G +C IC+E F +C H +C C Y+E+KV + CP C+
Sbjct: 135 GNVSCLICLEDYPPTQTFAL--ICNHRYCLPCYKNYLEIKVSEGPECIYTPCPAPKCKVI 192
Query: 96 LDPLACKPTIPSSLFIKWCDHLCEDYVL-GLERSYCPNRNCMAVMVNECEEIGRVKKAQC 154
+ A K + +F ++ + + + YV + +CP C+ + C+ R + C
Sbjct: 193 VHQDAFKQIVSPEVFERFNNFILKSYVDDNPQVKWCPAPGCIYSI--RCDRKERKEAVNC 250
Query: 155 PKCKQWFCFQC---KLAWHAGYRCEESGN-LRDRNDIAFGKLLEKMNWTRCPGCGNCIER 210
KC +CF C ++ H C + L+ +D + N +CP C + IE+
Sbjct: 251 -KCGFQYCFNCNDYEIGDHMPCPCSQVDKWLQKASDESENVTWMLANTKKCPECRSPIEK 309
Query: 211 KKGCRIMFCR 220
GC M CR
Sbjct: 310 NGGCMHMTCR 319
>sp|Q9LVW9|ARI4_ARATH Putative E3 ubiquitin-protein ligase ARI4 OS=Arabidopsis thaliana
GN=ARI4 PE=5 SV=2
Length = 529
Score = 48.5 bits (114), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 75/199 (37%), Gaps = 34/199 (17%)
Query: 38 TFTCDICIEPMSVNNKFKNNNLCTHPFCQDCTAKYIEVKVRDNNTAKIECPGLHCEQFLD 97
T CDIC+E ++ C H FC DC ++ V++ + +I C C D
Sbjct: 116 TMKCDICMEE-DLSKYAMTRMECGHRFCNDCWKEHFTVRINEGEGKRIRCMAYKCNTICD 174
Query: 98 PLACKPTIPSSLFIKWCDHLCEDYVLGLER-SYCPNRNCMAVMVNECEEIGRVKKAQCPK 156
+ + + L K+ L E YV +CP+ + ++ G V + +C
Sbjct: 175 E--ARQLVSTELAEKFDRFLIESYVEDNNMVKWCPSTPHCGNAIRNIKDDGDVDEVECS- 231
Query: 157 CKQWFCFQCKLAWHA----------GYRCEESGNLRDRNDIAFGKLLEKMNWTR-----C 201
C FCF C H+ +CE+ E +NW C
Sbjct: 232 CGLQFCFSCLSESHSPCSCLMWKLWKKKCEDES--------------ETVNWMTVNTKLC 277
Query: 202 PGCGNCIERKKGCRIMFCR 220
P C I+++ GC M C+
Sbjct: 278 PKCSKPIQKRDGCNHMTCK 296
>sp|Q8L829|ARI5_ARATH Probable E3 ubiquitin-protein ligase ARI5 OS=Arabidopsis thaliana
GN=ARI5 PE=2 SV=1
Length = 552
Score = 48.5 bits (114), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 73/207 (35%), Gaps = 32/207 (15%)
Query: 39 FTCDICIEPMSVNNKFKNNNLCTHPFCQDCTAKYIEVKVRDNNTAKI------ECPGLHC 92
FTC IC + ++ + C HPFC C YI + D + CP
Sbjct: 130 FTCGICFDSYTLEEIVSVS--CGHPFCATCWTGYISTTINDGPGCLMLKCPDPSCPAAIG 187
Query: 93 EQFLDPLACKPTIPSSLFIKWCDHLCEDYV-LGLERSYCPNRNCMAVMVNECEEIGRVKK 151
+D LA K K+ + YV + E +CP C + + G +
Sbjct: 188 RDMIDKLASKEDKE-----KYYRYFLRSYVEVNREMKWCPAPGCEHAI----DFAGGTES 238
Query: 152 AQCP-KCKQWFCFQCKLAWHAGYRCEESGNLRDRNDIAFGKLLEKMNWTR-----CPGCG 205
C FC+ C H C+ G +N E MNW CP C
Sbjct: 239 YDVSCLCSHSFCWNCTEEAHRPVDCDTVGKWILKNSAE----SENMNWILANSKPCPKCK 294
Query: 206 NCIERKKGCRIMF----CRFIFLSLCL 228
IE+ GC M C+F F LCL
Sbjct: 295 RPIEKNHGCMHMTCTPPCKFEFCWLCL 321
>sp|D3YYI7|RN217_MOUSE Probable E3 ubiquitin-protein ligase RNF217 OS=Mus musculus
GN=Rnf217 PE=3 SV=2
Length = 515
Score = 47.4 bits (111), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 79/202 (39%), Gaps = 40/202 (19%)
Query: 38 TFTCDICIEPMSVNNKFKNNNLCTHPFCQDCTAKYIEVKVRDNNTAKIECPGLHCEQFLD 97
C +C+E + K C C++C Y+ +V+ +I+CP C +FL+
Sbjct: 233 VLMCRVCLE----DKPIKPLPCCKKAVCEECLKIYLSSQVQLGQV-EIKCPVTECFEFLE 287
Query: 98 PLACKPTIPSSLFIKWCDHLCEDYVLGLERSYCPNRNCMAVMVNECEEIGRVKKA----- 152
+ IK+ Y L L R + C +C+ KK
Sbjct: 288 ETTVVYNLTHEDSIKY------KYFLELGRIDSSTKPC-----PQCKHFTTFKKKGHIPT 336
Query: 153 ----------QCPKCKQWFCFQCKLAWHAGYRCEE--SGNLRDRN---DIAFGKLLEKMN 197
QCP C+ +CF+C WH G C+E G+ R+ +I G + N
Sbjct: 337 PSRSESRYKIQCPTCQLIWCFKCHSPWHEGVNCKEYKKGDKLLRHWASEIEHG----QRN 392
Query: 198 WTRCPGCGNCIERKKGCRIMFC 219
+CP C I+R +GC M C
Sbjct: 393 AQKCPKCKIHIQRTEGCDHMTC 414
>sp|Q9SKC4|ARI10_ARATH Probable E3 ubiquitin-protein ligase ARI10 OS=Arabidopsis thaliana
GN=ARI10 PE=2 SV=1
Length = 514
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 75/200 (37%), Gaps = 14/200 (7%)
Query: 27 IKEEELEDIDGT---FTCDICIEPMSVNNKFKNNNLCTHPFCQDCTAKYIEVKVRDN-NT 82
I +E + D++GT C IC E S K + C HP+C+ C YI K+ D
Sbjct: 104 ILKEPVVDVNGTEVDIQCGICFE--SYTRKEIASVSCGHPYCKTCWTGYITTKIEDGPGC 161
Query: 83 AKIECPGLHCEQFLDPLACKPTIPSSLFIKWCDHLCEDYVL-GLERSYCPNRNCMAVMVN 141
+++CP C + K+ + YV G + +CP+ C +
Sbjct: 162 LRVKCPEPSCYAVVGQDMIDEVTEKKDKDKYYRYFLRSYVEDGKKMKWCPSPGCECAV-- 219
Query: 142 ECEEIGRVKKAQCP-KCKQWFCFQCKLAWHAGYRCEESGNLRDRN-DIAFGKLLEKMNWT 199
E G C FC+ C H+ CE +N D + K N
Sbjct: 220 ---EFGESSGYDVACLCSYRFCWNCSEDAHSPVDCETVSKWIFKNQDESENKNWILANSK 276
Query: 200 RCPGCGNCIERKKGCRIMFC 219
CP C IE+ GC M C
Sbjct: 277 PCPKCKRPIEKSHGCNHMTC 296
>sp|Q8W468|ARI8_ARATH Probable E3 ubiquitin-protein ligase ARI8 OS=Arabidopsis thaliana
GN=ARI8 PE=2 SV=1
Length = 567
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 76/209 (36%), Gaps = 20/209 (9%)
Query: 35 IDGTFTCDICIEPMSVNNKFKNNNLCTHPFCQDCTAKYIEVKVRDN-NTAKIECPGLHCE 93
DG C IC E +++K + C HPFC C YI + D + CP C
Sbjct: 122 TDGELDCGICFETF-LSDKL-HAAACGHPFCDSCWEGYITTAINDGPGCLTLRCPDPSCR 179
Query: 94 QFLDPLACKPTIPSSLFIKWCDHLCEDYVLGLERS-YCPNRNCMAVMVNECEEIGRVKKA 152
+ P K+ + YV ++ +CP C VN G
Sbjct: 180 AAVGQDMINLLAPDKDKQKYTSYFVRSYVEDNRKTKWCPAPGC-DYAVNFVVGSGNY-DV 237
Query: 153 QCPKCKQWFCFQCKLAWHAGYRCEESGNLRDRNDIAFGKLLEKMNWTR-----CPGCGNC 207
C +C FC+ C H C+ +N E MNW CP C
Sbjct: 238 NC-RCCYSFCWNCAEEAHRPVDCDTVSKWVLKNSAE----SENMNWILANSKPCPKCKRP 292
Query: 208 IERKKGCRIMF----CRFIFLSLCLCIFS 232
IE+ +GC + C+F F LCL ++
Sbjct: 293 IEKNQGCMHITCTPPCKFEFCWLCLGAWT 321
>sp|Q9SKC3|ARI9_ARATH Probable E3 ubiquitin-protein ligase ARI9 OS=Arabidopsis thaliana
GN=ARI9 PE=2 SV=1
Length = 543
Score = 45.8 bits (107), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 73/185 (39%), Gaps = 13/185 (7%)
Query: 41 CDICIEPMSVNNKFKNNNLCTHPFCQDCTAKYIEVKVRDN-NTAKIECPGLHCEQFLDPL 99
C IC E + + + C HP+C+ C A YI K+ D +++CP C +
Sbjct: 128 CGICFESYTREEIARVS--CGHPYCKTCWAGYITTKIEDGPGCLRVKCPEPSCSAAVGKD 185
Query: 100 ACKPTIPSSLFIKWCDHLCEDYVL-GLERSYCPNRNCMAVMVNECEEIGRVKKAQCPK-- 156
+ + + K+ ++ YV G + +CP+ C + E G + +
Sbjct: 186 MIEDVTETKVNEKYSRYILRSYVEDGKKIKWCPSPGCGYAV-----EFGGSESSSYDVSC 240
Query: 157 -CKQWFCFQCKLAWHAGYRCEESGNLRDRN-DIAFGKLLEKMNWTRCPGCGNCIERKKGC 214
C FC+ C H+ C+ +N D + K N CP C IE+ GC
Sbjct: 241 LCSYRFCWNCSEDAHSPVDCDTVSKWIFKNQDESENKNWMLANSKPCPECKRPIEKNDGC 300
Query: 215 RIMFC 219
M C
Sbjct: 301 NHMTC 305
>sp|Q9NV58|RN19A_HUMAN E3 ubiquitin-protein ligase RNF19A OS=Homo sapiens GN=RNF19A PE=1
SV=3
Length = 838
Score = 45.8 bits (107), Expect = 3e-04, Method: Composition-based stats.
Identities = 35/152 (23%), Positives = 66/152 (43%), Gaps = 22/152 (14%)
Query: 41 CDICIEPMSVNNKFKNNNLCTHPFCQDCTAKYIEVKVRDNNTAKIECPGLHCEQFLDPLA 100
C +C+ S ++F + C H C DC +Y+ +++ ++ I CP C + +P
Sbjct: 132 CPLCLLRHS-KDRFPDIMTCHHRSCVDCLRQYLRIEISESRV-NISCP--ECTERFNPHD 187
Query: 101 CKPTIPSSLFI-KWCDHLCEDYVLG-LERSYCPNRNC-MAVMVNECEEIGRVKKAQCPK- 156
+ + + + K+ + + +++ + +CP +C AV+ C A CPK
Sbjct: 188 IRLILSDDVLMEKYEEFMLRRWLVADPDCRWCPAPDCGYAVIAFGC--------ASCPKL 239
Query: 157 ------CKQWFCFQCKLAWHAGYRCEESGNLR 182
C FC+ CK WH C+ + R
Sbjct: 240 TCGREGCGTEFCYHCKQIWHPNQTCDAARQER 271
>sp|P0C8K8|ARI6_ARATH Putative E3 ubiquitin-protein ligase ARI6 OS=Arabidopsis thaliana
GN=ARI6 PE=5 SV=1
Length = 552
Score = 45.4 bits (106), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 71/212 (33%), Gaps = 41/212 (19%)
Query: 39 FTCDICIEPMSVNNKFKNNNLCTHPFCQDCTAKYIEVKVRDN-NTAKIECPGLHCEQFLD 97
FTC IC E + + C HPFC C YI + D ++CP
Sbjct: 131 FTCGICFESYPLEETISVS--CGHPFCATCWTGYISTSINDGPGCLMLKCP--------- 179
Query: 98 PLACKPTIPSSLFIKWCDHLC-----EDYVLGLERSYCP-NRNCMAVMVNECEEIGRVKK 151
P P+++ D+LC E Y RSY NR CE
Sbjct: 180 ----YPCCPAAIGRDMIDNLCSKEDKERYYRYFLRSYVEVNREMKCCPAPGCEHAISFAA 235
Query: 152 AQCPK------CKQWFCFQCKLAWHAGYRCEESGNLRDRNDIAFGKLLEKMNWTR----- 200
C FC+ C H C+ G +N E MNW
Sbjct: 236 GTESNYDVSCLCSHSFCWNCSEEAHRPVDCDTVGKWILKNSTE----SENMNWILANSKP 291
Query: 201 CPGCGNCIERKKGCRIMF----CRFIFLSLCL 228
CP C IE+ GC M C+F F LCL
Sbjct: 292 CPKCKRPIEKNHGCMHMTCTPPCKFEFCWLCL 323
>sp|P50636|RN19A_MOUSE E3 ubiquitin-protein ligase RNF19A OS=Mus musculus GN=Rnf19a PE=1
SV=2
Length = 840
Score = 45.1 bits (105), Expect = 4e-04, Method: Composition-based stats.
Identities = 35/152 (23%), Positives = 66/152 (43%), Gaps = 22/152 (14%)
Query: 41 CDICIEPMSVNNKFKNNNLCTHPFCQDCTAKYIEVKVRDNNTAKIECPGLHCEQFLDPLA 100
C +C+ S ++F + C H C DC +Y+ +++ ++ I CP C + +P
Sbjct: 132 CPLCLLRHS-KDRFPDIMTCHHRSCVDCLRQYLRIEISESRV-NISCP--ECTERFNPHD 187
Query: 101 CKPTIPSSLFI-KWCDHLCEDYVLG-LERSYCPNRNC-MAVMVNECEEIGRVKKAQCPK- 156
+ + + + K+ + + +++ + +CP +C AV+ C A CPK
Sbjct: 188 IRLILSDDVLMEKYEEFMLRRWLVADPDCRWCPAPDCGYAVIAFGC--------ASCPKL 239
Query: 157 ------CKQWFCFQCKLAWHAGYRCEESGNLR 182
C FC+ CK WH C+ + R
Sbjct: 240 TCGREGCGTEFCYHCKQIWHPNQTCDAARQER 271
>sp|Q9SKC2|ARI11_ARATH Probable E3 ubiquitin-protein ligase ARI11 OS=Arabidopsis thaliana
GN=ARI11 PE=2 SV=1
Length = 542
Score = 45.1 bits (105), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 84/224 (37%), Gaps = 26/224 (11%)
Query: 27 IKEEELEDIDGT---FTCDICIEPMSVNNKFKNNNLCTHPFCQDCTAKYIEVKVRDN-NT 82
I +E + D++GT C IC E S K C HP+C+ C YI K+ D
Sbjct: 122 ILKEPVVDVNGTEVDIQCGICFE--SYTRKEIARVSCGHPYCKTCWTGYITTKIEDGPGC 179
Query: 83 AKIECPGLHCEQFLDPLACKPTIPSSLFIKWCDHLCEDYVL-GLERSYCPNRNCMAVMVN 141
+++CP C + K+ + YV G + +CP+ C +
Sbjct: 180 LRVKCPEPSCYAVVGQDMIDEVTEKKDKDKYYRYFLRSYVEDGKKMKWCPSPGCEYAV-- 237
Query: 142 ECEEIGRVKKAQCPKCKQWFCFQCKLAWHAGYRCEESGN--LRDRNDIAFGKLLEKMNWT 199
E G C FC+ C H+ CE L+++++ E MNW
Sbjct: 238 EFGVNGSSSYDVSCLCSYKFCWNCCEDAHSPVDCETVSKWLLKNKDE------SENMNWI 291
Query: 200 R-----CPGCGNCIERKKGCRIMF----CRFIFLSLCLCIFSNR 234
CP C IE+ GC M CR F CL S+
Sbjct: 292 LAKTKPCPKCKRPIEKNTGCNHMSCSAPCRHYFCWACLQPLSDH 335
>sp|Q22431|ARI2_CAEEL Probable protein ariadne-2 OS=Caenorhabditis elegans GN=T12E12.1
PE=3 SV=2
Length = 482
Score = 45.1 bits (105), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 66/168 (39%), Gaps = 15/168 (8%)
Query: 60 CTHPFCQDCTAKYIEVKVRDNNTAKIECPGLHCEQFLDPLACKPTIPSSLFIKWCDHLCE 119
C H FC+ C ++E ++ + ++IEC CE + I +S IK
Sbjct: 145 CGHCFCEHCWKSHVESRLSEGVASRIECMESECEVYAPSEFVLSIIKNSPVIKL------ 198
Query: 120 DYVLGLERSYCPNRNCMAVMV-NECEEIGRV-----KKAQCPKCKQWFCFQCKLAWHAGY 173
Y L R + + V NEC I R K+ C +C FC +C +HA
Sbjct: 199 KYERFLLRDMVNSHPHLKFCVGNECPVIIRSTEVKPKRVTCMQCHTSFCVKCGADYHAPT 258
Query: 174 RCEESGNLRDR--NDIAFGKLLEKMNWTRCPGCGNCIERKKGCRIMFC 219
CE + +D + CP C +CIE+ GC + C
Sbjct: 259 SCETIKQWMTKCADDSETANYISAHT-KDCPQCHSCIEKAGGCNHIQC 305
>sp|Q2VJ60|RN19A_PIG E3 ubiquitin-protein ligase RNF19A OS=Sus scrofa GN=RNF19A PE=2
SV=1
Length = 838
Score = 44.7 bits (104), Expect = 5e-04, Method: Composition-based stats.
Identities = 35/152 (23%), Positives = 65/152 (42%), Gaps = 22/152 (14%)
Query: 41 CDICIEPMSVNNKFKNNNLCTHPFCQDCTAKYIEVKVRDNNTAKIECPGLHCEQFLDPLA 100
C +C+ S ++F C H C DC +Y+ +++ ++ I CP C + +P
Sbjct: 132 CPLCLLRHS-KDRFPEIMTCHHRSCVDCLRQYLRIEISESRV-NISCP--ECTERFNPHD 187
Query: 101 CKPTIPSSLFI-KWCDHLCEDYVLG-LERSYCPNRNC-MAVMVNECEEIGRVKKAQCPK- 156
+ + + + K+ + + +++ + +CP +C AV+ C A CPK
Sbjct: 188 IRLILSDDVLMEKYEEFMLRRWLVADPDCRWCPAPDCGYAVIAFGC--------ASCPKL 239
Query: 157 ------CKQWFCFQCKLAWHAGYRCEESGNLR 182
C FC+ CK WH C+ + R
Sbjct: 240 TCGREGCGTEFCYHCKQIWHPNQTCDAARQER 271
>sp|Q54CX4|Y5521_DICDI Uncharacterized protein DDB_G0292642 OS=Dictyostelium discoideum
GN=DDB_G0292642 PE=4 SV=2
Length = 903
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 70/178 (39%), Gaps = 29/178 (16%)
Query: 60 CTHPFCQDCTAKYIEVKVRDNNTAKIECPGLHCEQFLDPLACKPTIPSSLFI-----KWC 114
C H +C DC +++ + + + I CP C++ + S +++ W
Sbjct: 634 CDHVYCFDCITEHLRILITEGRVLDISCPHPQCKKEIK--------ESEIYMLTNEKNWL 685
Query: 115 DHLCEDYVLGLER---SYCPNRNCMAVMVNECEEIGRVKKAQCPKCKQWFCFQCKLAWHA 171
+ + L+ +CP +C + E R CPKC FC+ C H
Sbjct: 686 KYQKFSMIASLKTEPIKWCPTPDCDTPVRGGSE---RNPILNCPKCSNDFCWICGEYSHE 742
Query: 172 GYRC-EESGNLRDRND-------IAFGKLLE--KMNWTRCPGCGNCIERKKGCRIMFC 219
G +C E+ L+ R + A+ LE K CP C + IE+ GC M C
Sbjct: 743 GAKCGTEAMELQGRKNKSIESAATAYIDFLESNKHFVKPCPTCKSHIEKHDGCNHMTC 800
>sp|A2A7Q9|RN19B_MOUSE E3 ubiquitin-protein ligase RNF19B OS=Mus musculus GN=Rnf19b PE=1
SV=2
Length = 732
Score = 43.9 bits (102), Expect = 0.001, Method: Composition-based stats.
Identities = 34/133 (25%), Positives = 57/133 (42%), Gaps = 21/133 (15%)
Query: 60 CTHPFCQDCTAKYIEVKVRDNNTAKIECPGLHCEQFLDPLACKPTIPSS-LFIKWCDHLC 118
C H C+DC Y+ +++ ++ I CP C + L+P + + L K+ + +
Sbjct: 134 CPHRSCRDCLRHYLRLEISESRVP-ISCP--ECSERLNPHDIRLLLADPPLMHKYEEFML 190
Query: 119 EDYVLG-LERSYCPNRNC-MAVMVNECEEIGRVKKAQCPK-------CKQWFCFQCKLAW 169
Y+ + +CP +C AV+ C A CPK C+ FC+ CK W
Sbjct: 191 RRYLASDPDCRWCPAPDCGYAVIAYGC--------ASCPKLTCEREGCQTEFCYHCKQIW 242
Query: 170 HAGYRCEESGNLR 182
H C+ + R
Sbjct: 243 HPNQTCDMARQQR 255
>sp|Q6ZMZ0|RN19B_HUMAN E3 ubiquitin-protein ligase RNF19B OS=Homo sapiens GN=RNF19B PE=1
SV=2
Length = 732
Score = 43.5 bits (101), Expect = 0.001, Method: Composition-based stats.
Identities = 34/133 (25%), Positives = 57/133 (42%), Gaps = 21/133 (15%)
Query: 60 CTHPFCQDCTAKYIEVKVRDNNTAKIECPGLHCEQFLDPLACKPTIPSS-LFIKWCDHLC 118
C H C+DC Y+ +++ ++ I CP C + L+P + + L K+ + +
Sbjct: 137 CPHRSCRDCLRHYLRLEISESRVP-ISCP--ECSERLNPHDIRLLLADPPLMHKYEEFML 193
Query: 119 EDYVLG-LERSYCPNRNC-MAVMVNECEEIGRVKKAQCPK-------CKQWFCFQCKLAW 169
Y+ + +CP +C AV+ C A CPK C+ FC+ CK W
Sbjct: 194 RRYLASDPDCRWCPAPDCGYAVIAYGC--------ASCPKLTCEREGCQTEFCYHCKQIW 245
Query: 170 HAGYRCEESGNLR 182
H C+ + R
Sbjct: 246 HPNQTCDMARQQR 258
>sp|P36113|YKZ7_YEAST RING finger protein YKR017C OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=YKR017C PE=1 SV=1
Length = 551
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 85/216 (39%), Gaps = 29/216 (13%)
Query: 18 EKENPRQEEIKEEELEDIDGTFTCDICIEPMSVNNKFKNNNLCTHPFCQDCTAKYIEVKV 77
+K+N +E E ++ FTC IC + C H +C +C YI+ K+
Sbjct: 159 KKDNDYNSHFREVEFKN---DFTCIICCDKKDTETFALE---CGHEYCINCYRHYIKDKL 212
Query: 78 RDNNTAK-IECPGLHCEQFLDPLACKPTIPSSLFIKWCDHLCEDYVLGLERSY--CPNRN 134
+ N ++C + +D + P+ K D + +V R+Y CP +
Sbjct: 213 HEGNIITCMDCSLALKNEDIDKVMGHPSSS-----KLMDSSIKSFVQKHNRNYKWCPFAD 267
Query: 135 CMAVM----VNECEEIGRVKKAQCPKCKQW--FCFQCKLAWHAGYRCEESGNLRDRNDIA 188
C +++ + E R+ + KC + FCF C H+ C+ + +
Sbjct: 268 CKSIVHLRDTSSLPEYTRLHYSPFVKCNSFHRFCFNCGFEVHSPADCKITTAWVKKA--- 324
Query: 189 FGKLLEKMNWT-----RCPGCGNCIERKKGCRIMFC 219
K E +NW CP C IE+ GC M C
Sbjct: 325 -RKESEILNWVLSHTKECPKCSVNIEKNGGCNHMVC 359
>sp|Q94981|ARI1_DROME Protein ariadne-1 OS=Drosophila melanogaster GN=ari-1 PE=1 SV=2
Length = 503
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 68/167 (40%), Gaps = 12/167 (7%)
Query: 60 CTHPFCQDCTAKYIEVKVRDNNTAK-IECPGLHCEQFLDPLACKPTIPSS-LFIKWCDHL 117
C H FC C +Y+ K+ + I C C+ +D + + + + +K+ +
Sbjct: 150 CGHRFCMPCWHEYLSTKIVAEGLGQTISCAAHGCDILVDDVTVANLVTDARVRVKYQQLI 209
Query: 118 CEDYVL--GLERSYCPNRNCM-AVMVNECEEIGRVKKAQCPKCKQWFCFQCKLAWHAGYR 174
+V L R +CP+ +C AV V E ++ C KC FCF C WH +
Sbjct: 210 TNSFVECNQLLR-WCPSVDCTYAVKVPYAEP----RRVHC-KCGHVFCFACGENWHDPVK 263
Query: 175 CEESGNLRDR-NDIAFGKLLEKMNWTRCPGCGNCIERKKGCRIMFCR 220
C + +D + N CP C IE+ GC M C+
Sbjct: 264 CRWLKKWIKKCDDDSETSNWIAANTKECPRCSVTIEKDGGCNHMVCK 310
>sp|Q96EP0|RNF31_HUMAN E3 ubiquitin-protein ligase RNF31 OS=Homo sapiens GN=RNF31 PE=1
SV=1
Length = 1072
Score = 42.4 bits (98), Expect = 0.003, Method: Composition-based stats.
Identities = 44/203 (21%), Positives = 76/203 (37%), Gaps = 27/203 (13%)
Query: 51 NNKFKNNNLCTHPFCQDCTAKYIEVKVRDNNTAKIECPGLHCEQFLDP-----------L 99
+N+ + C C DC ++ + +++ + + CP D +
Sbjct: 708 HNRMQALTSCECTICPDCFRQHFTIALKEKHITDMVCPACGRPDLTDDTQLLSYFSTLDI 767
Query: 100 ACKPTIPSSLFIKWCDHLCEDYVLGLERSYCPNRNCMAVMVNECEEIGRVKKAQCPKCKQ 159
+ ++ + + L E VL + + C + E E++ +A CP+C Q
Sbjct: 768 QLRESLEPDAYALFHKKLTEG-VLMRDPKFLWCAQCSFGFIYEREQL----EATCPQCHQ 822
Query: 160 WFCFQCKLAW---HAGYRCEESGNLRDRNDIAFG----KLLEKMNWTRCPGCGNCIERKK 212
FC +CK W H G CE+ N + ND + + + N CP C +
Sbjct: 823 TFCVRCKRQWEEQHRGRSCEDFQNWKRMNDPEYQAQGLAMYLQENGIDCPKCKFSYALAR 882
Query: 213 GCRIMF----CRFIFLSLCLCIF 231
G + F CR F S C F
Sbjct: 883 GGCMHFHCTQCRHQFCSGCYNAF 905
>sp|Q04638|ITT1_YEAST Translation termination inhibitor protein ITT1 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=ITT1 PE=1
SV=1
Length = 464
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 73/220 (33%), Gaps = 65/220 (29%)
Query: 62 HPFCQDCTAKYIEVKVRDNNTAKIECPG-----LHCEQF-----LDPLACKPTIPSSLFI 111
H C+ C Y +++N + + CP L E F + P IP S
Sbjct: 204 HYLCRGCAKSYFTAMIQENRISSVRCPQCEYKELKLEDFKSYKKMLKALFTPLIPVSFLK 263
Query: 112 KWCD-HLCEDY-------VLGLERSYCPN-----RNCMAVMVNECEEIGRVKKAQCPKCK 158
+ D LCE Y YCP R C + E + + QC KC
Sbjct: 264 EVIDTELCERYEKMFYNQAATRLSKYCPYACVTCRRCDSWCTKEDLDDAMI---QCQKCH 320
Query: 159 QWFCFQCKLAWHA-----GYRCEESGNL-------------RDR---------------N 185
FCF C AWH G + S ++ R R N
Sbjct: 321 FVFCFDCLHAWHGYNNKCGKKVSLSTDIIEEYLDDTVTSYERKRKLEAKYGRRVLELEVN 380
Query: 186 DIAFGKLL------EKMNWTRCPGCGNCIERKKGCRIMFC 219
D K+L E N RCP C +ER +GC M C
Sbjct: 381 DYLAEKMLDLAIKKEGSNLQRCPKCKVVVERSEGCNKMKC 420
>sp|Q9FFN9|ARI13_ARATH Probable E3 ubiquitin-protein ligase ARI13 OS=Arabidopsis thaliana
GN=ARI13 PE=2 SV=1
Length = 536
Score = 41.6 bits (96), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 71/168 (42%), Gaps = 13/168 (7%)
Query: 33 EDIDGTFTCDICIEPMSVNNKFKNNNLCTHPFCQDCTAKYIE--VKVRDNNTAKIECPGL 90
+D+ +C IC + + + C+H FC+ C KY+E + + +I CP
Sbjct: 79 QDLYKISSCGICFKTCDDGDYLISTPFCSHMFCKSCWRKYLEKNFYLVEKTQTRISCPHG 138
Query: 91 HCEQFLDPLACKPTIPSSLFIKWCDHLCEDYVLG---LERSYCPNRNCMAVM-VNECEEI 146
C+ + P + + + +++ Y+ G LE YCP ++C V+ ++
Sbjct: 139 ACQAAVGPDTIQKLTVCDQEM-YVEYILRSYIEGNKVLEIKYCPAQDCNYVIEFHQKNHD 197
Query: 147 GRVKKAQCPK----CKQWFCFQCKLAWHAGYRCEESGN--LRDRNDIA 188
G ++ C FC++C L H C + + RD N ++
Sbjct: 198 GADQEDYGFNVVCLCGHIFCWRCMLESHKPVTCNNASDWLFRDLNSLS 245
>sp|Q924T7|RNF31_MOUSE E3 ubiquitin-protein ligase RNF31 OS=Mus musculus GN=Rnf31 PE=1
SV=2
Length = 1066
Score = 41.6 bits (96), Expect = 0.005, Method: Composition-based stats.
Identities = 29/92 (31%), Positives = 39/92 (42%), Gaps = 11/92 (11%)
Query: 151 KAQCPKCKQWFCFQCKLAW---HAGYRCEESGNLRDRNDIAFG----KLLEKMNWTRCPG 203
+A CP+C Q FC +CK W H G CE+ N + ND + + + N CP
Sbjct: 808 EATCPQCHQTFCVRCKRQWEEQHRGRSCEDFQNWKRTNDPEYQAQGLAMYLQENGIDCPK 867
Query: 204 CGNCIERKKGCRIMF----CRFIFLSLCLCIF 231
C +G + F CR F S C F
Sbjct: 868 CKFSYALARGGCMHFHCTQCRHQFCSGCYNAF 899
>sp|Q8TC41|RN217_HUMAN Probable E3 ubiquitin-protein ligase RNF217 OS=Homo sapiens
GN=RNF217 PE=2 SV=3
Length = 275
Score = 41.6 bits (96), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 38/74 (51%), Gaps = 9/74 (12%)
Query: 151 KAQCPKCKQWFCFQCKLAWHAGYRCEE--SGNLRDRN---DIAFGKLLEKMNWTRCPGCG 205
K QCP C+ +CF+C WH G C+E G+ R+ +I G + N +CP C
Sbjct: 80 KIQCPTCQFVWCFKCHSPWHEGVNCKEYKKGDKLLRHWASEIEHG----QRNAQKCPKCK 135
Query: 206 NCIERKKGCRIMFC 219
I+R +GC M C
Sbjct: 136 IHIQRTEGCDHMTC 149
>sp|P0CE10|Y4102_ARATH Putative uncharacterized protein At4g01020, chloroplastic
OS=Arabidopsis thaliana GN=At4g01020 PE=4 SV=1
Length = 1787
Score = 41.6 bits (96), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/189 (19%), Positives = 69/189 (36%), Gaps = 20/189 (10%)
Query: 41 CDICIEPMSVNNKFKNNNLCTHPFCQDCTAKYIEVKVRDNNTAKIECPGLHCEQFLDPLA 100
C IC+ + + C+H FC+ C + E +R+ + I C + C
Sbjct: 1561 CPICLSEVDDGYSLEG---CSHLFCKACLLEQFEASMRNFDAFPILCSHIDC-------- 1609
Query: 101 CKPTIPSSLFIKWCDHLCEDYVLGLERSYCPNRNCMAVM--VNECEEIGRVKKAQ----- 153
P + + + ++ + ++ + + +C I RV Q
Sbjct: 1610 GAPIVVADMRALLSQEKLDELISASLSAFVTSSDGKLRFCSTPDCPSIYRVAGPQESGEP 1669
Query: 154 --CPKCKQWFCFQCKLAWHAGYRCEESGNLRDRNDIAFGKLLEKMNWTRCPGCGNCIERK 211
C C C +C L +H CE ++ D++ + + CP C + IE+
Sbjct: 1670 FICGACHSETCTRCHLEYHPLITCERYKKFKENPDLSLKDWAKGKDVKECPICKSTIEKT 1729
Query: 212 KGCRIMFCR 220
GC + CR
Sbjct: 1730 DGCNHLQCR 1738
>sp|Q9WUB0|HOIL1_MOUSE RanBP-type and C3HC4-type zinc finger-containing protein 1 OS=Mus
musculus GN=Rbck1 PE=1 SV=2
Length = 508
Score = 40.4 bits (93), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 78/188 (41%), Gaps = 34/188 (18%)
Query: 60 CTHPFCQDCTAKYIEVKVRDNNTAKIECPGLHCEQFLDPLACKPTIPSSLFIKWCDHLC- 118
C H FC++C ++ +R++ A++ CP F+D + P L + L
Sbjct: 298 CLHTFCREC----LQGTIRNSQEAEVACP------FIDSTY---SCPGKLLEREIRALLS 344
Query: 119 -EDY--VLGLERSYCPNRNCMAVMVNECEEIG------RVKKAQCPKCKQWFCFQCKLAW 169
EDY L L S NR+ ++ + G V + CP C + C CK A
Sbjct: 345 PEDYQRFLDLGVSIAENRSTLSYHCKTPDCRGWCFFEDDVNEFTCPVCTRVNCLLCK-AI 403
Query: 170 HAGYRCEESGN---LRDRNDIAFGK-------LLEKMNWTRCPGCGNCIERKKGCRIMFC 219
H C E + LR +ND+A + +L++ CP C +++K GC + C
Sbjct: 404 HEHMNCREYQDDLALRAQNDVAARQTTEMLKVMLQQGEAMHCPQCRIVVQKKDGCDWIRC 463
Query: 220 RFIFLSLC 227
+C
Sbjct: 464 TVCHTEIC 471
>sp|A9JTG5|HOIL1_DANRE RanBP-type and C3HC4-type zinc finger-containing protein 1 OS=Danio
rerio GN=rbck1 PE=2 SV=1
Length = 714
Score = 40.4 bits (93), Expect = 0.010, Method: Composition-based stats.
Identities = 44/183 (24%), Positives = 66/183 (36%), Gaps = 24/183 (13%)
Query: 60 CTHPFCQDCTAKYIEVKVRDNNTAKIECP----GLHCEQFLDPLACKPTIPSSLFIKWCD 115
C H FC++C I + + ++ CP C+ L + + + W
Sbjct: 504 CLHCFCKECLRSVILM----SEDPQVACPYRDESYACDCVLQEREIRALVSVDDYQHWLQ 559
Query: 116 HLCEDYVLGLERSY-CPNRNCMAVMVNECEEIGRVKKAQCPKCKQWFCFQCKLAWHAGYR 174
E SY C +C V E V CP CK+ C CK A H G
Sbjct: 560 RGLSVAESRCEGSYHCATADCPGWCVYE----DTVNTFHCPVCKKQNCLLCK-AIHEGMN 614
Query: 175 CEESGN---LRDRNDIA-------FGKLLEKMNWTRCPGCGNCIERKKGCRIMFCRFIFL 224
C++ + R ND A L+ CP CG +++K+GC + C
Sbjct: 615 CKQYQDDLTARAINDSAARRTRDLLKTLVNSGEAMHCPQCGIIVQKKEGCDWLRCTVCHT 674
Query: 225 SLC 227
+C
Sbjct: 675 EIC 677
>sp|P58283|RN216_MOUSE E3 ubiquitin-protein ligase RNF216 OS=Mus musculus GN=Rnf216 PE=1
SV=3
Length = 853
Score = 40.4 bits (93), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 78/171 (45%), Gaps = 20/171 (11%)
Query: 61 THPFCQDCTAKYIEVKVRDNNTAKIECPGLHCEQFLDPLACKPTIPSSLFIKWCDHLCED 120
H FC++C +Y + V + +++ C C + +P ++ K+ + E+
Sbjct: 521 AHLFCKECLIRYAQEAVFGSGKSELSCMEGSCTCSFPTSELEKVLPQTILYKYYERKAEE 580
Query: 121 YVLGLERSY---CPNRNCMAVMVNECEEIGRVKKAQC--PKCKQWFCFQCKLAW--HAGY 173
V CP+ + A++ ++ VK+ C P+C++ C +C+ W H G
Sbjct: 581 EVAAAYADELVRCPSCSFPALLDSD------VKRFSCPNPRCRKETCRKCQGLWKEHNGL 634
Query: 174 RCEESGNLRDRNDIAF-GKLLEKMNWTR---CPGCGNCIERKKGCRIMFCR 220
CEE L +++DI + + EKM R C CG + + +GC M CR
Sbjct: 635 TCEE---LAEKDDIKYRTSIEEKMTAARIRKCHKCGTGLIKSEGCNRMSCR 682
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.325 0.140 0.481
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 96,248,614
Number of Sequences: 539616
Number of extensions: 4173696
Number of successful extensions: 20032
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 99
Number of HSP's that attempted gapping in prelim test: 19780
Number of HSP's gapped (non-prelim): 221
length of query: 237
length of database: 191,569,459
effective HSP length: 114
effective length of query: 123
effective length of database: 130,053,235
effective search space: 15996547905
effective search space used: 15996547905
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 59 (27.3 bits)