BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026533
(237 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FPT1|UBP12_ARATH Ubiquitin carboxyl-terminal hydrolase 12 OS=Arabidopsis thaliana
GN=UBP12 PE=1 SV=2
Length = 1116
Score = 85.1 bits (209), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 74/138 (53%), Gaps = 4/138 (2%)
Query: 97 KDAPSIKHVWRIENFSKLRSECCDSQVFSSGDQKWQIQLYPKGRRHGTGTHLAVYLALAD 156
+D P++K W I NFS+ + S VF G KW+I ++PKG HL++YL ++D
Sbjct: 50 EDPPTLKFTWTIPNFSRQNTRKHYSDVFVVGGYKWRILIFPKG---NNVDHLSMYLDVSD 106
Query: 157 STTLTPGSKIYAEFTLRLLDQAQARHIAGK-ADFWFSASNPESGWARYVSFTYFNKPGNG 215
+ +L G YA+F+L +++Q R+ K F+A + G+ ++ + P G
Sbjct: 107 AASLPYGWSRYAQFSLAVVNQIHTRYTVRKETQHQFNARESDWGFTSFMPLSELYDPSRG 166
Query: 216 CLVKDVCLVEAEVTVHGI 233
LV D LVEAEV V +
Sbjct: 167 YLVNDTVLVEAEVAVRKV 184
Score = 53.5 bits (127), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 46/81 (56%), Gaps = 3/81 (3%)
Query: 3 NTSSLQHGWEVYAVFRLFLLDQNKGNFLILQDAMGAERRFHRLKREWGFDEFIPIKAFND 62
+ +SL +GW YA F L +++Q + + ++ + +F+ + +WGF F+P+ D
Sbjct: 106 DAASLPYGWSRYAQFSLAVVNQIHTRYTVRKET---QHQFNARESDWGFTSFMPLSELYD 162
Query: 63 ASNGFLLEDTCVFGAEVFVSK 83
S G+L+ DT + AEV V K
Sbjct: 163 PSRGYLVNDTVLVEAEVAVRK 183
>sp|Q84WU2|UBP13_ARATH Ubiquitin carboxyl-terminal hydrolase 13 OS=Arabidopsis thaliana
GN=UBP13 PE=1 SV=1
Length = 1115
Score = 84.0 bits (206), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 75/138 (54%), Gaps = 4/138 (2%)
Query: 97 KDAPSIKHVWRIENFSKLRSECCDSQVFSSGDQKWQIQLYPKGRRHGTGTHLAVYLALAD 156
+D PS+K W I F++L + S VF G KW+I ++PKG HL++YL +AD
Sbjct: 49 EDPPSLKFTWTIPMFTRLNTRKHYSDVFVVGGYKWRILIFPKG---NNVDHLSMYLDVAD 105
Query: 157 STTLTPGSKIYAEFTLRLLDQAQARH-IAGKADFWFSASNPESGWARYVSFTYFNKPGNG 215
+ L G Y++F+L +++Q R+ I + F+A + G+ ++ + +P G
Sbjct: 106 AANLPYGWSRYSQFSLAVVNQVNNRYSIRKETQHQFNARESDWGFTSFMPLSELYEPTRG 165
Query: 216 CLVKDVCLVEAEVTVHGI 233
LV D L+EAEV V +
Sbjct: 166 YLVNDTVLIEAEVAVRKV 183
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 46/81 (56%), Gaps = 3/81 (3%)
Query: 3 NTSSLQHGWEVYAVFRLFLLDQNKGNFLILQDAMGAERRFHRLKREWGFDEFIPIKAFND 62
+ ++L +GW Y+ F L +++Q + I ++ + +F+ + +WGF F+P+ +
Sbjct: 105 DAANLPYGWSRYSQFSLAVVNQVNNRYSIRKET---QHQFNARESDWGFTSFMPLSELYE 161
Query: 63 ASNGFLLEDTCVFGAEVFVSK 83
+ G+L+ DT + AEV V K
Sbjct: 162 PTRGYLVNDTVLIEAEVAVRK 182
>sp|Q8RY18|Y5436_ARATH MATH domain-containing protein At5g43560 OS=Arabidopsis thaliana
GN=At5g43560 PE=1 SV=1
Length = 1055
Score = 50.1 bits (118), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 61/131 (46%), Gaps = 10/131 (7%)
Query: 103 KHVWRIENFSKLRSECCDSQVFSSGDQKWQIQLYPKGRRHGTGTHLAVYLALADSTTLTP 162
K+ W IE FS + VF G KW I +YP+G HL+++L +A L P
Sbjct: 70 KNTWTIEKFSDINKRELRGDVFEVGGYKWYILIYPQG--CDVCNHLSLFLCVAHHEKLLP 127
Query: 163 GSKIYAEFTLRL--LDQAQARHIAGKADFWFSASNPESGWARYVSFTYFNKPGNGCLVKD 220
G +A+FT+ + D +++H FW + GW +++ + G +
Sbjct: 128 GWSHFAQFTIAVSNKDPKKSKHSDTLHRFWKKEH--DWGWKKFIELPKLKE---GFIDDS 182
Query: 221 VCL-VEAEVTV 230
CL ++A+V V
Sbjct: 183 GCLTIKAQVQV 193
>sp|P34568|BAT43_CAEEL BTB and MATH domain-containing protein 43 OS=Caenorhabditis elegans
GN=bath-43 PE=3 SV=2
Length = 451
Score = 38.9 bits (89), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 62/135 (45%), Gaps = 13/135 (9%)
Query: 104 HVWRIENFSKLRSE---CCDSQVFSSG---DQKWQIQLYPKGRRHGTGTHLAVYLALADS 157
++W I NFS R E S FS+G KW +++ PKG + +L++YL L
Sbjct: 98 YMWTINNFSFCREEMGEVLKSSTFSAGCNDKLKWCLRINPKGLDEESRDYLSLYLLLVQC 157
Query: 158 TTLTPGSKIYAEFTLRLLD--QAQARHIAGKADFWFSASNPESGWARYVSFTYFNKPGNG 215
S++ A+F +L+ + + + + + + F + G+ +++ + NG
Sbjct: 158 NK----SEVRAKFKFSILNAKREETKAMESQRAYRF-VQGKDWGFKKFIRRDFLLDEANG 212
Query: 216 CLVKDVCLVEAEVTV 230
L D + EV+V
Sbjct: 213 LLPGDRLSIFCEVSV 227
>sp|Q8T126|FNKC_DICDI Probable inactive serine/threonine-protein kinase fnkC
OS=Dictyostelium discoideum GN=fnkC PE=3 SV=1
Length = 1304
Score = 38.1 bits (87), Expect = 0.051, Method: Composition-based stats.
Identities = 43/213 (20%), Positives = 90/213 (42%), Gaps = 17/213 (7%)
Query: 17 FRLFLLDQNKGNFLILQDAMGAERRFHRLKREWGFDEFIPIKAFNDASNGFLLEDTCVFG 76
++L L++Q N I + + F + G+ FI + + + +NGFL+ +T
Sbjct: 1095 YKLTLINQKNPNESIQKSS---SHTFSIKEFNHGYGSFIGLFSLLNPNNGFLVNNTI--- 1148
Query: 77 AEVFVSKERSTGKGECLSMIKDAPSIKHVWRIENFSKLRSECCDSQVFSSGDQKWQIQLY 136
+V + ++ + + + SK +SE S +F S +KW I++Y
Sbjct: 1149 -KVRIDAAPTSPLVNTYDKYNIGLNQAFSYSVPMMSK-KSEPFISPIFMSCGRKWIIKIY 1206
Query: 137 PKGRRHGTGTHLAVYLALADSTTLTPGSKIYAEFTLRLLDQAQARH-IAGKADFWFSASN 195
P G+ + +++V+L D + F+L L+ Q I + F++ +
Sbjct: 1207 PMGQP--SSNYMSVFLEYRDE------GEENVHFSLELISQLYPEQSIKYWVQYRFNSKS 1258
Query: 196 PESGWARYVSFTYFNKPGNGCLVKDVCLVEAEV 228
G+ +++ + P G LV D ++ +
Sbjct: 1259 NSFGYPKFIGVSTLMDPDMGFLVNDTIILNVSI 1291
Score = 33.5 bits (75), Expect = 1.2, Method: Composition-based stats.
Identities = 30/125 (24%), Positives = 50/125 (40%), Gaps = 8/125 (6%)
Query: 108 IENFSKLRSECCDSQVFSSGDQKWQIQLYPKGRRHGTGTHLAVYLALADSTTLTPGSKIY 167
I NFS R + S +FS W+ + Y G+ T L+++++ D L I+
Sbjct: 1032 INNFSN-RKDQFYSPIFSLIGSNWRCKFYSNGKDASTSGKLSIFISNCD--LLNNPFTIF 1088
Query: 168 AE----FTLRLLDQAQARH-IAGKADFWFSASNPESGWARYVSFTYFNKPGNGCLVKDVC 222
E + L L++Q I + FS G+ ++ P NG LV +
Sbjct: 1089 LEKSISYKLTLINQKNPNESIQKSSSHTFSIKEFNHGYGSFIGLFSLLNPNNGFLVNNTI 1148
Query: 223 LVEAE 227
V +
Sbjct: 1149 KVRID 1153
>sp|Q9SRV1|BPM4_ARATH BTB/POZ and MATH domain-containing protein 4 OS=Arabidopsis
thaliana GN=BPM4 PE=1 SV=1
Length = 465
Score = 36.6 bits (83), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 6/59 (10%)
Query: 121 SQVFSSGDQKWQIQLYPKGRR-HGTGTHLAVYLALADSTTLTPGSKIYAEFTLRLLDQA 178
S F+ G +W I YP G+ +++V++ALA + G+ + A F L LLDQ+
Sbjct: 70 SDTFTVGGYQWAIYFYPDGKNPEDNSAYVSVFIALA-----SDGTDVRALFELSLLDQS 123
>sp|Q9NF14|BAT40_CAEEL BTB and MATH domain-containing protein 40 OS=Caenorhabditis elegans
GN=bath-40 PE=1 SV=1
Length = 402
Score = 35.8 bits (81), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 52/122 (42%), Gaps = 10/122 (8%)
Query: 86 STGKGECLSMIKDAPSIKHVWRIENFSKL-----RSECCDSQVFSSG---DQKWQIQLYP 137
++ K EC++ + + W + NF L C S VF D WQ+ LYP
Sbjct: 29 TSQKNECMTN-PGSIVLTQRWTVCNFESLLKLSRPGSCLRSTVFKDDAVPDACWQLCLYP 87
Query: 138 KGRRHGTGTHLAVYLALADSTTLTPGSKIYAEFTLRLLDQAQARHIAGKADFWFSASNPE 197
G+R +++++L ++ +T+ + + AE+ LD + F A P+
Sbjct: 88 GGKREENANNVSLFLKMS-ATSPSKEVVLKAEYRFYFLDDNDEPKFSNVNVGEFHAKPPK 146
Query: 198 SG 199
G
Sbjct: 147 GG 148
>sp|Q94420|MEL26_CAEEL Protein maternal effect lethal 26 OS=Caenorhabditis elegans
GN=mel-26 PE=1 SV=2
Length = 395
Score = 35.4 bits (80), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 60/133 (45%), Gaps = 14/133 (10%)
Query: 102 IKHVWRIENFSKLRSECCDSQVF-SSGDQK--WQIQLYPKGRRHGTGTHLAVYLALADST 158
++H W ++NFS E ++ V+ GD++ W I++YPKG + + L +
Sbjct: 42 VQHTWTVKNFSHCYQEYLENFVYLQRGDEQLTWSIKIYPKGNGENNKDFVFLCLNRVINN 101
Query: 159 TLTPGSKIY-AEFTLRLLDQAQARHIAGKADFWFSASNPESGWARYVSFTYFNKPGNGCL 217
+ G + ++F LR A+ + I + +P + YVS+ + +
Sbjct: 102 NVKAGKIGFKSQFKLR---TAENKDIEMRI-------HPNPSHSDYVSYIKRDVLFPQIM 151
Query: 218 VKDVCLVEAEVTV 230
+D+ +V E+ V
Sbjct: 152 PRDMIIVNVEIDV 164
>sp|A0JMG1|SPOLB_DANRE Speckle-type POZ protein-like B OS=Danio rerio GN=spoplb PE=2 SV=2
Length = 392
Score = 34.7 bits (78), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 67/147 (45%), Gaps = 20/147 (13%)
Query: 104 HVWRIENFSKLRSECCD---SQVFSSGDQ---KWQIQLYPKGRRHGTGTHLAVYLALADS 157
++W I NFS R E + S FSSG KW +++ PKG + +L++YL
Sbjct: 34 YMWTINNFSFCREEMGEVVRSSTFSSGPNDKMKWCLRVNPKGLDDESKDYLSLYLL---- 89
Query: 158 TTLTPGSKIYAEFTLRLLD--QAQARHIAGKADFWFSASNPESGWARYVSFTYFNKPGNG 215
P S++ A+F LL+ + + + + + + F + G+ +++ + NG
Sbjct: 90 LVSCPKSEVRAKFKFSLLNAKREETKAMESQRAYRF-VQGKDWGFKKFIRRDFLLDEANG 148
Query: 216 CLVKD-------VCLVEAEVTVHGISN 235
L D V +V+ V + G SN
Sbjct: 149 LLPDDKLTLFCEVSVVQDSVNISGQSN 175
Score = 33.1 bits (74), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 42/90 (46%), Gaps = 5/90 (5%)
Query: 12 EVYAVFRLFLLDQNKGNFLILQDAMGAERRFHRLK-REWGFDEFIPIKAFNDASNGFLLE 70
EV A F+ LL+ + AM ++R + ++ ++WGF +FI D +NG L +
Sbjct: 97 EVRAKFKFSLLNAKREE----TKAMESQRAYRFVQGKDWGFKKFIRRDFLLDEANGLLPD 152
Query: 71 DTCVFGAEVFVSKERSTGKGECLSMIKDAP 100
D EV V ++ G+ + + P
Sbjct: 153 DKLTLFCEVSVVQDSVNISGQSNTNMLKVP 182
>sp|Q5BL35|SPOLA_DANRE Speckle-type POZ protein-like A OS=Danio rerio GN=spopla PE=2 SV=1
Length = 392
Score = 34.3 bits (77), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 67/147 (45%), Gaps = 20/147 (13%)
Query: 104 HVWRIENFSKLRSECCD---SQVFSSGDQ---KWQIQLYPKGRRHGTGTHLAVYLALADS 157
++W I NFS R E + S FSSG KW +++ PKG + +L++YL
Sbjct: 34 YMWTINNFSFCREEMGEVLKSSTFSSGPNDKMKWCLRVNPKGLDDESKDYLSLYLL---- 89
Query: 158 TTLTPGSKIYAEFTLRLLD--QAQARHIAGKADFWFSASNPESGWARYVSFTYFNKPGNG 215
P S++ A+F LL+ + + + + + + F + G+ +++ + NG
Sbjct: 90 LVSCPKSEVRAKFKFSLLNAKREETKAMESQRAYRF-VQGKDWGFKKFIRRDFLLDEANG 148
Query: 216 CLVKD-------VCLVEAEVTVHGISN 235
L D V +V+ V + G SN
Sbjct: 149 LLPDDKLTLFCEVSVVQDSVNISGQSN 175
Score = 33.9 bits (76), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 6/88 (6%)
Query: 12 EVYAVFRLFLLDQNKGNFLILQDAMGAERRFHRLK-REWGFDEFIPIKAFNDASNGFLLE 70
EV A F+ LL+ + AM ++R + ++ ++WGF +FI D +NG L +
Sbjct: 97 EVRAKFKFSLLNAKREE----TKAMESQRAYRFVQGKDWGFKKFIRRDFLLDEANGLLPD 152
Query: 71 DTCVFGAEVFVSKERSTGKGEC-LSMIK 97
D EV V ++ G+ ++M+K
Sbjct: 153 DKLTLFCEVSVVQDSVNISGQSNMNMLK 180
>sp|Q54C11|Y3202_DICDI TNF receptor-associated factor family protein DDB_G0293202
OS=Dictyostelium discoideum GN=DDB_G0293202 PE=2 SV=1
Length = 437
Score = 34.3 bits (77), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 39/83 (46%), Gaps = 10/83 (12%)
Query: 95 MIKDAPSIKHVWRIENFSKLRSE---CCDSQVFSSGDQKWQIQLYPKGRRHGTGTHLAVY 151
+I K VW I+NFSK + + S V + G + + LYP G + + L++Y
Sbjct: 297 LISKQEKFKSVWDIKNFSKRQFQKGFYFSSPVITVGHHSFHLWLYPNGETSPSNS-LSLY 355
Query: 152 LALADSTTLTPGSKIYAEFTLRL 174
L LT G K + F++ +
Sbjct: 356 LV------LTKGEKTFVNFSISI 372
>sp|O22286|BPM3_ARATH BTB/POZ and MATH domain-containing protein 3 OS=Arabidopsis
thaliana GN=BPM3 PE=1 SV=1
Length = 408
Score = 34.3 bits (77), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 6/59 (10%)
Query: 121 SQVFSSGDQKWQIQLYPKGRR-HGTGTHLAVYLALADSTTLTPGSKIYAEFTLRLLDQA 178
S +FS G W I YP G+ +++++++ALA + + I A F L L+DQ+
Sbjct: 48 SDIFSVGGYDWAIYFYPDGKNPEDQSSYISLFIALASDS-----NDIRALFELTLMDQS 101
>sp|Q1EBV6|BPM5_ARATH BTB/POZ and MATH domain-containing protein 5 OS=Arabidopsis
thaliana GN=BPM5 PE=1 SV=1
Length = 410
Score = 34.3 bits (77), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 34/59 (57%), Gaps = 6/59 (10%)
Query: 121 SQVFSSGDQKWQIQLYPKGRR-HGTGTHLAVYLALADSTTLTPGSKIYAEFTLRLLDQA 178
S FS G +W I YP G+ ++++V++ALA + G+++ A F L L+DQ+
Sbjct: 52 SDNFSVGGYQWGIFFYPDGKNPEDNSSYVSVFIALA-----SEGTEVRALFELALVDQS 105
>sp|Q717B3|TDPZ1_MOUSE TD and POZ domain-containing protein 1 OS=Mus musculus GN=Tdpoz1
PE=2 SV=2
Length = 365
Score = 34.3 bits (77), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 59/134 (44%), Gaps = 11/134 (8%)
Query: 106 WRIENFSKLR---SECCDSQVFSSGDQK---WQIQLYPKGRRHGTGTHLAVYLALADSTT 159
W I NFS S VFSS + K W +++YPKG + +L+VYL L
Sbjct: 24 WTISNFSFCMGGIQRRITSPVFSSEENKEVAWCLRVYPKGADKESKDYLSVYLVLLSHLQ 83
Query: 160 LTPGSKIYAEFTLRLLDQAQARHIAGKADFWFS-ASNPESGWARYVSFTYFNKPGNGCLV 218
S ++A+F +++ ++ K+ + +SG+ +++ N L
Sbjct: 84 ----SPVWAKFKFWIINSQGEKYQKTKSPIVECFLTYEQSGFKKFLPRDLLLSHRNCLLP 139
Query: 219 KDVCLVEAEVTVHG 232
+D + +VT+ G
Sbjct: 140 EDQLTICCKVTILG 153
>sp|B0UQR1|RLMN_METS4 Dual-specificity RNA methyltransferase RlmN OS=Methylobacterium sp.
(strain 4-46) GN=rlmN PE=3 SV=1
Length = 431
Score = 33.9 bits (76), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Query: 109 ENFSKLRSECCDSQVFSSGDQKWQIQLYPKGRR-HGTGTHL-AVYLALADSTTLTPGSKI 166
E ++ R E QV G +KW +++ P GR H G + VY+ D TL S++
Sbjct: 97 EAYTLDRPEVVSEQVSRDGTRKWLLRMPPTGRHDHNRGAEIECVYIPANDRGTLCVSSQV 156
Query: 167 YAEFT 171
T
Sbjct: 157 GCTLT 161
>sp|B1M1U6|RLMN_METRJ Dual-specificity RNA methyltransferase RlmN OS=Methylobacterium
radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831)
GN=rlmN PE=3 SV=2
Length = 424
Score = 33.9 bits (76), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Query: 109 ENFSKLRSECCDSQVFSSGDQKWQIQLYPKGRR-HGTGTHL-AVYLALADSTTLTPGSKI 166
E+F+ R E QV G +KW +++ P R+ H G + VY+ D TL S++
Sbjct: 91 EHFTLERPEVASRQVSRDGTRKWLLRMAPTNRQEHNRGAEIECVYIPGPDRGTLCVSSQV 150
Query: 167 YAEFT 171
T
Sbjct: 151 GCTLT 155
>sp|Q6IQ16|SPOPL_HUMAN Speckle-type POZ protein-like OS=Homo sapiens GN=SPOPL PE=2 SV=1
Length = 392
Score = 33.5 bits (75), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 70/159 (44%), Gaps = 21/159 (13%)
Query: 92 CLSMIKDAPSIKHVWRIENFSKLRSE---CCDSQVFSSG---DQKWQIQLYPKGRRHGTG 145
C + +K ++W I NFS R E S FSSG KW +++ PKG +
Sbjct: 23 CYTQVK-VVKFSYMWTINNFSFCREEMGEVLKSSTFSSGPSDKMKWCLRVNPKGLDDESK 81
Query: 146 THLAVYLALADSTTLTPGSKIYAEFTLRLLD--QAQARHIAGKADFWFSASNPESGWARY 203
+L++YL P S++ A+F LL+ + + + + + + F + G+ ++
Sbjct: 82 DYLSLYLL----LVSCPKSEVRAKFKFSLLNAKREETKAMESQRAYRF-VQGKDWGFKKF 136
Query: 204 VSFTYFNKPGNGCLVKD-------VCLVEAEVTVHGISN 235
+ + NG L D V +V+ V + G +N
Sbjct: 137 IRRDFLLDEANGLLPDDKLTLFCEVSVVQDSVNISGHTN 175
Score = 32.7 bits (73), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 5/74 (6%)
Query: 12 EVYAVFRLFLLDQNKGNFLILQDAMGAERRFHRLK-REWGFDEFIPIKAFNDASNGFLLE 70
EV A F+ LL+ + AM ++R + ++ ++WGF +FI D +NG L +
Sbjct: 97 EVRAKFKFSLLNAKREE----TKAMESQRAYRFVQGKDWGFKKFIRRDFLLDEANGLLPD 152
Query: 71 DTCVFGAEVFVSKE 84
D EV V ++
Sbjct: 153 DKLTLFCEVSVVQD 166
>sp|Q2M2N2|SPOPL_MOUSE Speckle-type POZ protein-like OS=Mus musculus GN=Spopl PE=2 SV=3
Length = 392
Score = 33.5 bits (75), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 64/146 (43%), Gaps = 12/146 (8%)
Query: 92 CLSMIKDAPSIKHVWRIENFSKLRSE---CCDSQVFSSGDQ---KWQIQLYPKGRRHGTG 145
C + +K ++W I NFS R E S FSSG KW +++ PKG +
Sbjct: 23 CYTQVK-VVKFSYMWTINNFSFCREEMGEVLKSSTFSSGPNDKMKWCLRVNPKGLDDESK 81
Query: 146 THLAVYLALADSTTLTPGSKIYAEFTLRLLDQAQARHIAGKADFWFS-ASNPESGWARYV 204
+L++YL P S++ A+F LL+ + A ++ + + G+ +++
Sbjct: 82 DYLSLYLL----LVSCPKSEVRAKFKFSLLNDKREETKAMESQRAYRFVQGKDWGFKKFI 137
Query: 205 SFTYFNKPGNGCLVKDVCLVEAEVTV 230
+ NG L D + EV+V
Sbjct: 138 RRDFLLDEANGLLPDDKLTLFCEVSV 163
Score = 33.5 bits (75), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 49/115 (42%), Gaps = 15/115 (13%)
Query: 12 EVYAVFRLFLLDQNKGNFLILQDAMGAERRFHRLK-REWGFDEFIPIKAFNDASNGFLLE 70
EV A F+ LL+ + AM ++R + ++ ++WGF +FI D +NG L +
Sbjct: 97 EVRAKFKFSLLNDKREE----TKAMESQRAYRFVQGKDWGFKKFIRRDFLLDEANGLLPD 152
Query: 71 DTCVFGAEVFVSKERSTGKGECLSMIKDAPSIK------HVWRIENFSKLRSECC 119
D EV V ++ G + P + ++W F ++CC
Sbjct: 153 DKLTLFCEVSVVQDSVNVSGHTSTNTLKVPECRLAEDLGNLWENTRF----TDCC 203
>sp|Q9UTT1|UBP21_SCHPO Ubiquitin carboxyl-terminal hydrolase 21 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=ubp21 PE=3 SV=2
Length = 1129
Score = 33.1 bits (74), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 96 IKDAPSIKHVWRIENFSKLRSECCDSQVFSSGDQKWQIQLYPKG 139
+++A + W ++NFS L + S +F +G W+I L+PKG
Sbjct: 46 LEEAAHASYSWVVKNFSTLEDKTY-SPLFKAGHTTWRIVLFPKG 88
>sp|Q6GR09|SPOPL_XENLA Speckle-type POZ protein-like OS=Xenopus laevis GN=spopl PE=2 SV=1
Length = 392
Score = 33.1 bits (74), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 60/134 (44%), Gaps = 11/134 (8%)
Query: 104 HVWRIENFSKLRSECCD---SQVFSSGDQ---KWQIQLYPKGRRHGTGTHLAVYLALADS 157
++W I NFS R E + S FSSG KW +++ PKG + +L++YL
Sbjct: 34 YMWTINNFSFCREETGEVLKSSSFSSGPNDKLKWCLRVNPKGLDDESKDYLSLYLL---- 89
Query: 158 TTLTPGSKIYAEFTLRLLDQAQARHIAGKADFWFS-ASNPESGWARYVSFTYFNKPGNGC 216
P +++ A+F LL+ A ++ + + G+ +Y+ + NG
Sbjct: 90 LVSCPKNEVRAKFKFSLLNSKNEETKAMESQRAYRFVQGKDWGFKKYIRRDFLLDEANGL 149
Query: 217 LVKDVCLVEAEVTV 230
L D + EV+V
Sbjct: 150 LPDDKLTLYCEVSV 163
Score = 31.6 bits (70), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 38/81 (46%), Gaps = 5/81 (6%)
Query: 12 EVYAVFRLFLLDQNKGNFLILQDAMGAERRFHRLK-REWGFDEFIPIKAFNDASNGFLLE 70
EV A F+ LL+ AM ++R + ++ ++WGF ++I D +NG L +
Sbjct: 97 EVRAKFKFSLLNSKNEE----TKAMESQRAYRFVQGKDWGFKKYIRRDFLLDEANGLLPD 152
Query: 71 DTCVFGAEVFVSKERSTGKGE 91
D EV V ++ G+
Sbjct: 153 DKLTLYCEVSVVQDSINISGQ 173
>sp|Q9VFP2|RDX_DROME Protein roadkill OS=Drosophila melanogaster GN=rdx PE=1 SV=2
Length = 829
Score = 33.1 bits (74), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 5/71 (7%)
Query: 12 EVYAVFRLFLLDQNKGNFLILQDAMGAERRFHRLK-REWGFDEFIPIKAFNDASNGFLLE 70
EV A F+ +L+ + AM ++R + ++ ++WGF +FI D +NG L E
Sbjct: 552 EVRAKFKFSILNAKREE----TKAMESQRAYRFVQGKDWGFKKFIRRDFLLDEANGLLPE 607
Query: 71 DTCVFGAEVFV 81
D EV V
Sbjct: 608 DKLTIFCEVSV 618
>sp|P50101|UBP15_YEAST Ubiquitin carboxyl-terminal hydrolase 15 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=UBP15 PE=1
SV=1
Length = 1230
Score = 32.7 bits (73), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Query: 105 VWRIENFSKLRSECCDSQVFSSGDQKWQIQLYPKGRRHGTGTHLAVYL 152
W I ++++L + +S F GD +W I L+P+G H G +AVYL
Sbjct: 43 TWNIPDWNELTNPKYNSPRFRIGDFEWDILLFPQG-NHNKG--VAVYL 87
>sp|Q8IXS6|PALM2_HUMAN Paralemmin-2 OS=Homo sapiens GN=PALM2 PE=2 SV=3
Length = 379
Score = 32.7 bits (73), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 68/165 (41%), Gaps = 13/165 (7%)
Query: 58 KAFNDASNGFLLEDTCVFGAEVFVSKERSTGKGECLSMIKDAPSIKH---VWRIENFSKL 114
K+F D GF D V+ E+ V K++ TG+ + LS P H V ++ +K+
Sbjct: 119 KSFKDFQKGFSSTDGAVYAMEINVEKDKQTGETKILSTSTIGPEGVHQKGVKVYDDGTKV 178
Query: 115 RSEC-CDSQVFSSGDQKWQIQ-----LYPKGRRHGTGTHLAVYLALADSTTLTPGSKIY- 167
E V +G K + + G+ G H++ +AD + P +
Sbjct: 179 VYEVRSGGTVVENGVHKLSTKDVEELIQKAGQSSLGGGHVSERTVIADGSLSHPKEHMLC 238
Query: 168 AEFTLRLLDQAQARHIAGKADFWF---SASNPESGWARYVSFTYF 209
E L ++ +++ H +G SA+ PE+ + V+ +
Sbjct: 239 KEAKLEMVHKSRKDHSSGNPGQQAQAPSAAGPEANLDQPVTMIFM 283
>sp|Q7T330|SPOP_DANRE Speckle-type POZ protein OS=Danio rerio GN=spop PE=2 SV=1
Length = 374
Score = 32.3 bits (72), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 6/88 (6%)
Query: 12 EVYAVFRLFLLDQNKGNFLILQDAMGAERRFHRLK-REWGFDEFIPIKAFNDASNGFLLE 70
EV A F+ +L+ KG AM ++R + ++ ++WGF +FI D +NG L +
Sbjct: 97 EVRAKFKFSILNA-KGE---ETKAMESQRAYRFVQGKDWGFKKFIRRDFLLDEANGLLPD 152
Query: 71 DTCVFGAEVFVSKERSTGKGE-CLSMIK 97
D EV V ++ G+ ++M+K
Sbjct: 153 DKLTLFCEVSVVQDSVNISGQNTMNMVK 180
Score = 32.0 bits (71), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 65/147 (44%), Gaps = 14/147 (9%)
Query: 92 CLSMIKDAPSIKHVWRIENFSKLRSE---CCDSQVFSSGDQ---KWQIQLYPKGRRHGTG 145
C + IK ++W I NFS R E S FSSG KW +++ PKG +
Sbjct: 23 CYTQIK-VVKFSYMWTINNFSFCREEMGEVIKSSTFSSGANDKLKWCLRVNPKGLDEESK 81
Query: 146 THLAVYLALADSTTLTPGSKIYAEFTLRLLDQA--QARHIAGKADFWFSASNPESGWARY 203
+L++YL P S++ A+F +L+ + + + + + F + G+ ++
Sbjct: 82 DYLSLYL----LLVSCPKSEVRAKFKFSILNAKGEETKAMESQRAYRF-VQGKDWGFKKF 136
Query: 204 VSFTYFNKPGNGCLVKDVCLVEAEVTV 230
+ + NG L D + EV+V
Sbjct: 137 IRRDFLLDEANGLLPDDKLTLFCEVSV 163
>sp|Q6P8B3|SPOP_XENTR Speckle-type POZ protein OS=Xenopus tropicalis GN=spop PE=2 SV=1
Length = 374
Score = 32.3 bits (72), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 6/88 (6%)
Query: 12 EVYAVFRLFLLDQNKGNFLILQDAMGAERRFHRLK-REWGFDEFIPIKAFNDASNGFLLE 70
EV A F+ +L+ KG AM ++R + ++ ++WGF +FI D +NG L +
Sbjct: 97 EVRAKFKFSILNA-KGE---ETKAMESQRAYRFVQGKDWGFKKFIRRDFLLDEANGLLPD 152
Query: 71 DTCVFGAEVFVSKERSTGKGE-CLSMIK 97
D EV V ++ G+ ++M+K
Sbjct: 153 DKLTLFCEVSVVQDSVNISGQNTMNMVK 180
Score = 32.0 bits (71), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 65/147 (44%), Gaps = 14/147 (9%)
Query: 92 CLSMIKDAPSIKHVWRIENFSKLRSE---CCDSQVFSSGDQ---KWQIQLYPKGRRHGTG 145
C + IK ++W I NFS R E S FSSG KW +++ PKG +
Sbjct: 23 CYTQIK-VVKFSYMWTINNFSFCREEMGEVIKSSTFSSGANDKLKWCLRVNPKGLDEESK 81
Query: 146 THLAVYLALADSTTLTPGSKIYAEFTLRLLDQA--QARHIAGKADFWFSASNPESGWARY 203
+L++YL P S++ A+F +L+ + + + + + F + G+ ++
Sbjct: 82 DYLSLYLL----LVSCPKSEVRAKFKFSILNAKGEETKAMESQRAYRF-VQGKDWGFKKF 136
Query: 204 VSFTYFNKPGNGCLVKDVCLVEAEVTV 230
+ + NG L D + EV+V
Sbjct: 137 IRRDFLLDEANGLLPDDKLTLFCEVSV 163
>sp|Q5NVK7|SPOP_PONAB Speckle-type POZ protein OS=Pongo abelii GN=SPOP PE=1 SV=1
Length = 374
Score = 32.3 bits (72), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 6/88 (6%)
Query: 12 EVYAVFRLFLLDQNKGNFLILQDAMGAERRFHRLK-REWGFDEFIPIKAFNDASNGFLLE 70
EV A F+ +L+ KG AM ++R + ++ ++WGF +FI D +NG L +
Sbjct: 97 EVRAKFKFSILNA-KGE---ETKAMESQRAYRFVQGKDWGFKKFIRRDFLLDEANGLLPD 152
Query: 71 DTCVFGAEVFVSKERSTGKGE-CLSMIK 97
D EV V ++ G+ ++M+K
Sbjct: 153 DKLTLFCEVSVVQDSVNISGQNTMNMVK 180
Score = 32.0 bits (71), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 65/147 (44%), Gaps = 14/147 (9%)
Query: 92 CLSMIKDAPSIKHVWRIENFSKLRSE---CCDSQVFSSGDQ---KWQIQLYPKGRRHGTG 145
C + IK ++W I NFS R E S FSSG KW +++ PKG +
Sbjct: 23 CYTQIK-VVKFSYMWTINNFSFCREEMGEVIKSSTFSSGANDKLKWCLRVNPKGLDEESK 81
Query: 146 THLAVYLALADSTTLTPGSKIYAEFTLRLLDQA--QARHIAGKADFWFSASNPESGWARY 203
+L++YL P S++ A+F +L+ + + + + + F + G+ ++
Sbjct: 82 DYLSLYL----LLVSCPKSEVRAKFKFSILNAKGEETKAMESQRAYRF-VQGKDWGFKKF 136
Query: 204 VSFTYFNKPGNGCLVKDVCLVEAEVTV 230
+ + NG L D + EV+V
Sbjct: 137 IRRDFLLDEANGLLPDDKLTLFCEVSV 163
>sp|Q6ZWS8|SPOP_MOUSE Speckle-type POZ protein OS=Mus musculus GN=Spop PE=1 SV=1
Length = 374
Score = 32.3 bits (72), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 6/88 (6%)
Query: 12 EVYAVFRLFLLDQNKGNFLILQDAMGAERRFHRLK-REWGFDEFIPIKAFNDASNGFLLE 70
EV A F+ +L+ KG AM ++R + ++ ++WGF +FI D +NG L +
Sbjct: 97 EVRAKFKFSILNA-KGE---ETKAMESQRAYRFVQGKDWGFKKFIRRDFLLDEANGLLPD 152
Query: 71 DTCVFGAEVFVSKERSTGKGE-CLSMIK 97
D EV V ++ G+ ++M+K
Sbjct: 153 DKLTLFCEVSVVQDSVNISGQNTMNMVK 180
Score = 32.0 bits (71), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 65/147 (44%), Gaps = 14/147 (9%)
Query: 92 CLSMIKDAPSIKHVWRIENFSKLRSE---CCDSQVFSSGDQ---KWQIQLYPKGRRHGTG 145
C + IK ++W I NFS R E S FSSG KW +++ PKG +
Sbjct: 23 CYTQIK-VVKFSYMWTINNFSFCREEMGEVIKSSTFSSGANDKLKWCLRVNPKGLDEESK 81
Query: 146 THLAVYLALADSTTLTPGSKIYAEFTLRLLDQA--QARHIAGKADFWFSASNPESGWARY 203
+L++YL P S++ A+F +L+ + + + + + F + G+ ++
Sbjct: 82 DYLSLYL----LLVSCPKSEVRAKFKFSILNAKGEETKAMESQRAYRF-VQGKDWGFKKF 136
Query: 204 VSFTYFNKPGNGCLVKDVCLVEAEVTV 230
+ + NG L D + EV+V
Sbjct: 137 IRRDFLLDEANGLLPDDKLTLFCEVSV 163
>sp|O43791|SPOP_HUMAN Speckle-type POZ protein OS=Homo sapiens GN=SPOP PE=1 SV=1
Length = 374
Score = 32.3 bits (72), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 6/88 (6%)
Query: 12 EVYAVFRLFLLDQNKGNFLILQDAMGAERRFHRLK-REWGFDEFIPIKAFNDASNGFLLE 70
EV A F+ +L+ KG AM ++R + ++ ++WGF +FI D +NG L +
Sbjct: 97 EVRAKFKFSILNA-KGE---ETKAMESQRAYRFVQGKDWGFKKFIRRDFLLDEANGLLPD 152
Query: 71 DTCVFGAEVFVSKERSTGKGE-CLSMIK 97
D EV V ++ G+ ++M+K
Sbjct: 153 DKLTLFCEVSVVQDSVNISGQNTMNMVK 180
Score = 32.0 bits (71), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 65/147 (44%), Gaps = 14/147 (9%)
Query: 92 CLSMIKDAPSIKHVWRIENFSKLRSE---CCDSQVFSSGDQ---KWQIQLYPKGRRHGTG 145
C + IK ++W I NFS R E S FSSG KW +++ PKG +
Sbjct: 23 CYTQIK-VVKFSYMWTINNFSFCREEMGEVIKSSTFSSGANDKLKWCLRVNPKGLDEESK 81
Query: 146 THLAVYLALADSTTLTPGSKIYAEFTLRLLDQA--QARHIAGKADFWFSASNPESGWARY 203
+L++YL P S++ A+F +L+ + + + + + F + G+ ++
Sbjct: 82 DYLSLYL----LLVSCPKSEVRAKFKFSILNAKGEETKAMESQRAYRF-VQGKDWGFKKF 136
Query: 204 VSFTYFNKPGNGCLVKDVCLVEAEVTV 230
+ + NG L D + EV+V
Sbjct: 137 IRRDFLLDEANGLLPDDKLTLFCEVSV 163
>sp|Q0VCW1|SPOP_BOVIN Speckle-type POZ protein OS=Bos taurus GN=SPOP PE=2 SV=1
Length = 374
Score = 32.3 bits (72), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 6/88 (6%)
Query: 12 EVYAVFRLFLLDQNKGNFLILQDAMGAERRFHRLK-REWGFDEFIPIKAFNDASNGFLLE 70
EV A F+ +L+ KG AM ++R + ++ ++WGF +FI D +NG L +
Sbjct: 97 EVRAKFKFSILNA-KGE---ETKAMESQRAYRFVQGKDWGFKKFIRRDFLLDEANGLLPD 152
Query: 71 DTCVFGAEVFVSKERSTGKGE-CLSMIK 97
D EV V ++ G+ ++M+K
Sbjct: 153 DKLTLFCEVSVVQDSVNISGQNTMNMVK 180
Score = 32.0 bits (71), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 65/147 (44%), Gaps = 14/147 (9%)
Query: 92 CLSMIKDAPSIKHVWRIENFSKLRSE---CCDSQVFSSGDQ---KWQIQLYPKGRRHGTG 145
C + IK ++W I NFS R E S FSSG KW +++ PKG +
Sbjct: 23 CYTQIK-VVKFSYMWTINNFSFCREEMGEVIKSSTFSSGANDKLKWCLRVNPKGLDEESK 81
Query: 146 THLAVYLALADSTTLTPGSKIYAEFTLRLLDQA--QARHIAGKADFWFSASNPESGWARY 203
+L++YL P S++ A+F +L+ + + + + + F + G+ ++
Sbjct: 82 DYLSLYL----LLVSCPKSEVRAKFKFSILNAKGEETKAMESQRAYRF-VQGKDWGFKKF 136
Query: 204 VSFTYFNKPGNGCLVKDVCLVEAEVTV 230
+ + NG L D + EV+V
Sbjct: 137 IRRDFLLDEANGLLPDDKLTLFCEVSV 163
>sp|Q7ZX06|SPOPA_XENLA Speckle-type POZ protein A OS=Xenopus laevis GN=spop-a PE=2 SV=1
Length = 374
Score = 32.3 bits (72), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 6/88 (6%)
Query: 12 EVYAVFRLFLLDQNKGNFLILQDAMGAERRFHRLK-REWGFDEFIPIKAFNDASNGFLLE 70
EV A F+ +L+ KG AM ++R + ++ ++WGF +FI D +NG L +
Sbjct: 97 EVRAKFKFSILNA-KGE---ETKAMESQRAYRFVQGKDWGFKKFIRRDFLLDEANGLLPD 152
Query: 71 DTCVFGAEVFVSKERSTGKGE-CLSMIK 97
D EV V ++ G+ ++M+K
Sbjct: 153 DKLTLFCEVSVVQDSVNISGQNTMNMVK 180
Score = 32.0 bits (71), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 65/147 (44%), Gaps = 14/147 (9%)
Query: 92 CLSMIKDAPSIKHVWRIENFSKLRSE---CCDSQVFSSGDQ---KWQIQLYPKGRRHGTG 145
C + IK ++W I NFS R E S FSSG KW +++ PKG +
Sbjct: 23 CYTQIK-VVKFSYMWTINNFSFCREEMGEVIKSSTFSSGANDKLKWCLRVNPKGLDEESK 81
Query: 146 THLAVYLALADSTTLTPGSKIYAEFTLRLLDQA--QARHIAGKADFWFSASNPESGWARY 203
+L++YL P S++ A+F +L+ + + + + + F + G+ ++
Sbjct: 82 DYLSLYLL----LVSCPKSEVRAKFKFSILNAKGEETKAMESQRAYRF-VQGKDWGFKKF 136
Query: 204 VSFTYFNKPGNGCLVKDVCLVEAEVTV 230
+ + NG L D + EV+V
Sbjct: 137 IRRDFLLDEANGLLPDDKLTLFCEVSV 163
>sp|Q0IHH9|SPOPB_XENLA Speckle-type POZ protein B OS=Xenopus laevis GN=spop-b PE=2 SV=1
Length = 374
Score = 32.3 bits (72), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 6/88 (6%)
Query: 12 EVYAVFRLFLLDQNKGNFLILQDAMGAERRFHRLK-REWGFDEFIPIKAFNDASNGFLLE 70
EV A F+ +L+ KG AM ++R + ++ ++WGF +FI D +NG L +
Sbjct: 97 EVRAKFKFSILNA-KGE---ETKAMESQRAYRFVQGKDWGFKKFIRRDFLLDEANGLLPD 152
Query: 71 DTCVFGAEVFVSKERSTGKGE-CLSMIK 97
D EV V ++ G+ ++M+K
Sbjct: 153 DKLTLFCEVSVVQDSVNISGQNTMNMVK 180
Score = 32.0 bits (71), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 65/147 (44%), Gaps = 14/147 (9%)
Query: 92 CLSMIKDAPSIKHVWRIENFSKLRSE---CCDSQVFSSGDQ---KWQIQLYPKGRRHGTG 145
C + IK ++W I NFS R E S FSSG KW +++ PKG +
Sbjct: 23 CYTQIK-VVKFSYMWTINNFSFCREEMGEVIKSSTFSSGANDKLKWCLRVNPKGLDEESK 81
Query: 146 THLAVYLALADSTTLTPGSKIYAEFTLRLLDQA--QARHIAGKADFWFSASNPESGWARY 203
+L++YL P S++ A+F +L+ + + + + + F + G+ ++
Sbjct: 82 DYLSLYLL----LVSCPKSEVRAKFKFSILNAKGEETKAMESQRAYRF-VQGKDWGFKKF 136
Query: 204 VSFTYFNKPGNGCLVKDVCLVEAEVTV 230
+ + NG L D + EV+V
Sbjct: 137 IRRDFLLDEANGLLPDDKLTLFCEVSV 163
>sp|Q9M8J9|BPM2_ARATH BTB/POZ and MATH domain-containing protein 2 OS=Arabidopsis
thaliana GN=BPM2 PE=1 SV=1
Length = 406
Score = 32.0 bits (71), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 41/85 (48%), Gaps = 11/85 (12%)
Query: 104 HVWRIENFSKLRS----ECCDSQVFSSGDQKWQIQLYPKGRR-HGTGTHLAVYLALADST 158
H ++I +S ++ + S F G W I YP G+ ++++++ALA
Sbjct: 35 HEFKISGYSLVKGMGIGKYVASDTFMVGGYSWAIYFYPDGKSPEDNSVYVSLFIALA--- 91
Query: 159 TLTPGSKIYAEFTLRLLDQA-QARH 182
+ G+ + A F L L+DQ+ RH
Sbjct: 92 --SEGADVRALFELTLVDQSGNERH 114
>sp|A1L4W5|BPM6_ARATH BTB/POZ and MATH domain-containing protein 6 OS=Arabidopsis
thaliana GN=BPM6 PE=1 SV=1
Length = 415
Score = 32.0 bits (71), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 6/59 (10%)
Query: 121 SQVFSSGDQKWQIQLYPKGRR-HGTGTHLAVYLALADSTTLTPGSKIYAEFTLRLLDQA 178
S FS G +W I +YP G+ ++++V++ LA T ++ A F L L+DQ+
Sbjct: 59 SDNFSVGGYQWTIFVYPDGKNPEDNSSYVSVFIVLASECT-----EVRALFELSLVDQS 112
>sp|Q717B4|TDPZ3_MOUSE TD and POZ domain-containing protein 3 OS=Mus musculus GN=Tdpoz3
PE=2 SV=2
Length = 365
Score = 32.0 bits (71), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 42/90 (46%), Gaps = 14/90 (15%)
Query: 106 WRIENFS---KLRSECCDSQVFS---SGDQKWQIQLYPKGRRHGTGTHLAVYLALADSTT 159
W I NFS + S VFS S + W ++LYP G + +L+VYL L +
Sbjct: 24 WTISNFSFCMGAHQKSITSPVFSLEASKEVAWCLRLYPNGVDEESKDYLSVYLELLSALE 83
Query: 160 LTPGSKIYAEFTLRLL----DQAQARHIAG 185
S I A+F ++ ++ Q+R I+
Sbjct: 84 ----SPILAKFEFWIINSQGEKYQSRKISN 109
>sp|Q8L765|BPM1_ARATH BTB/POZ and MATH domain-containing protein 1 OS=Arabidopsis
thaliana GN=BPM1 PE=1 SV=1
Length = 407
Score = 32.0 bits (71), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 6/59 (10%)
Query: 121 SQVFSSGDQKWQIQLYPKGRR-HGTGTHLAVYLALADSTTLTPGSKIYAEFTLRLLDQA 178
S F G W I YP G+ +++++++ALA + G+ + A F L L+DQ+
Sbjct: 57 SDTFMVGGYSWAIYFYPDGKSPEDNSSYVSLFIALA-----SEGADVRALFELTLVDQS 110
>sp|Q54NN4|Y8514_DICDI TNF receptor-associated factor family protein DDB_G0285149
OS=Dictyostelium discoideum GN=DDB_G0285149 PE=3 SV=1
Length = 427
Score = 32.0 bits (71), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 18/108 (16%), Positives = 49/108 (45%), Gaps = 6/108 (5%)
Query: 123 VFSSGDQKWQIQLYPKGRRHGTGTHLAVYLALADSTTLTPGSKIYAEFTLRLLDQAQARH 182
+F +K+ + +P G ++++YL L +++ I +F+ +++ +
Sbjct: 316 MFYFNSRKYNVSCFPNGFTPANKDYISLYLHLHEAS-----PNINIKFSFEIVNSDPTKS 370
Query: 183 IAGKADFWFSASNPESGWARYVSFTYFNKPGNGCLVKDVCLVEAEVTV 230
I + + +F ++ GW ++ N G G +V + ++ E+ +
Sbjct: 371 IKKEKNSYFQ-NDKGIGWEKFAECKTINTLGEGFVVGNKLTIKFEIEI 417
>sp|P34371|BAT42_CAEEL BTB and MATH domain-containing protein 42 OS=Caenorhabditis elegans
GN=bath-42 PE=1 SV=1
Length = 410
Score = 31.6 bits (70), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 41/92 (44%), Gaps = 12/92 (13%)
Query: 99 APSIKHVWRIENFSKLRSECCD-----SQVFSSGDQK---WQIQLYPKGRRHGTGTHLAV 150
A S K W+IE F KL + S++FS D W++ +YP G+R +++
Sbjct: 43 ALSTKLEWKIEQFEKLMKLIKNGSNLISRMFSVPDAPTVCWELHVYPNGKRDEDVNNVSF 102
Query: 151 YLALADSTTLTPGSK-IYAEFTLRLLDQAQAR 181
+L L G + I EF + LD R
Sbjct: 103 FLR---QVGLARGEEPIMTEFQIYALDANNQR 131
>sp|B1ZG98|RLMN_METPB Dual-specificity RNA methyltransferase RlmN OS=Methylobacterium
populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001)
GN=rlmN PE=3 SV=1
Length = 425
Score = 31.6 bits (70), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Query: 109 ENFSKLRSECCDSQVFSSGDQKWQIQLYPKGRR-HGTGTHL-AVYLALADSTTLTPGSKI 166
E+F+ R E QV G +KW +++ P G H G + VY+ D TL S++
Sbjct: 95 EHFTLDRPEVVTEQVSRDGTRKWLLRMAPTGAHDHNRGAEIECVYIPGDDRGTLCVSSQV 154
Query: 167 YAEFT 171
T
Sbjct: 155 GCTLT 159
>sp|P11467|DG17_DICDI RING finger protein DG17 OS=Dictyostelium discoideum GN=zfaA PE=2
SV=2
Length = 460
Score = 31.6 bits (70), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 60/125 (48%), Gaps = 14/125 (11%)
Query: 103 KHVWRIENFS-----KLRSECCDSQVFSSGDQKWQIQLYPKGRRHGTGTHLAVYLALADS 157
++ W I N+S KL + S + S +Q+ +YPKG + ++++YL + +
Sbjct: 322 RNKWIISNYSSVAKSKLNCQALSSPMLSILSHLFQVCVYPKGDEN--KEYISLYLRV--N 377
Query: 158 TTLTPGS-KIYAEFTL-RLLDQAQARHIAGKADFWFSASNPESGWARYVSFTYFNKPGNG 215
P S K+ FTL +LD++++ I K D S+ GW +++ NK NG
Sbjct: 378 NIEEPNSLKVEYSFTLVNVLDKSKS--ITKKEDKKVFISSEGWGWGKFLLSDLINKE-NG 434
Query: 216 CLVKD 220
L D
Sbjct: 435 WLSND 439
>sp|P65370|MMPL7_MYCTU Putative membrane protein mmpL7 OS=Mycobacterium tuberculosis
GN=mmpL7 PE=3 SV=1
Length = 920
Score = 31.2 bits (69), Expect = 6.4, Method: Composition-based stats.
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 143 GTGTHLAVYLALADSTTLTPGSKIYAEFTLRLLDQAQARHIAGKADFW 190
GTG++ YL + +TL P + Y + + L +A RH+ D+W
Sbjct: 95 GTGSNAIAYLVVEGGSTLEPQDQPYYDAAVGAL-RADTRHVGSVLDWW 141
>sp|P65371|MMPL7_MYCBO Putative membrane protein mmpL7 OS=Mycobacterium bovis (strain ATCC
BAA-935 / AF2122/97) GN=mmpL7 PE=3 SV=1
Length = 920
Score = 31.2 bits (69), Expect = 6.4, Method: Composition-based stats.
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 143 GTGTHLAVYLALADSTTLTPGSKIYAEFTLRLLDQAQARHIAGKADFW 190
GTG++ YL + +TL P + Y + + L +A RH+ D+W
Sbjct: 95 GTGSNAIAYLVVEGGSTLEPQDQPYYDAAVGAL-RADTRHVGSVLDWW 141
>sp|P41886|BAT41_CAEEL BTB and MATH domain-containing protein 41 OS=Caenorhabditis elegans
GN=bath-41 PE=1 SV=1
Length = 418
Score = 30.8 bits (68), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 22/109 (20%), Positives = 49/109 (44%), Gaps = 4/109 (3%)
Query: 124 FSSGDQKWQIQLYPKGRRHGTGTHLAVYLALADSTTLTPGSKIYAEFTLRLLDQAQARHI 183
F GD ++ ++L+P G+ T +L+++L + + P + FT+ D ++ H+
Sbjct: 73 FGDGDYEFVMKLFPNGKDEETAGYLSLFLLI--NKCPNPRLRFRVSFTVETADGPRSCHL 130
Query: 184 AGKADFWFSASNPESGWARYVSFTYFNKPGNGCLVKDVCLVEAEVTVHG 232
K + S + +++ S N + D+ + E+T+ G
Sbjct: 131 -NKNLVTINRSGIVTA-SKFFSLDILRSAMNVYIPNDILTIGCELTIFG 177
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.136 0.426
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 91,163,365
Number of Sequences: 539616
Number of extensions: 3719346
Number of successful extensions: 6257
Number of sequences better than 100.0: 44
Number of HSP's better than 100.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 40
Number of HSP's that attempted gapping in prelim test: 6222
Number of HSP's gapped (non-prelim): 69
length of query: 237
length of database: 191,569,459
effective HSP length: 114
effective length of query: 123
effective length of database: 130,053,235
effective search space: 15996547905
effective search space used: 15996547905
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 59 (27.3 bits)