Citrus Sinensis ID: 026540

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------
Protein Sequence
MTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNSTRDETKNKSNVEKVDVGMSKLEIKVGK
Secondary Structure (PSIPRED)
ccccccccHHHHHHHHHHHHHcccccccccccccccccccccccEEEEEcccccccccccccccccccccccHHHccccccccHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHccccHHHHHcccccccccccccccccccccccccccHHHHHHHccccccHHHHHHHHHHcccccccccccHHHHHccccccccccccccccccccccccccccccEEEEccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHHHHHHHHcccccccEEEccccccEEEcccEEEEEccHHHcEEccEccccccccHHHccHHHHHccccccHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHccccHHHHHHcccHHHHEcccccEcccccccEccHHHHHHHcccccHHHHHHHHHHHcccccccccccEcHHHHHccHHHHccccccccccccccccccccccccccccccc
Coil and Loop (DISEMBL)
MTIVEKKLKRRAKRAVANISIRrasmggielpkpercldgidmRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELAtgdmlfapksgqgfcedEDHLALMMELIGKMprkiaiggaqskdyfdrhgdlkriRRLKFWSLDRLLVDKYRFSETDAREFAEFLVplldftpekrptaqqclqhpwlslrnstrdetknksnvekvDVGMSKLEIKVGK
Flexible Loop (DISEMBL)
mtivekklkrrakravanisirrasmggielpkperCLDGIDMRCKVVDFGNACRANKQFAeeiqtrqyraPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGgaqskdyfdrhgdlkrirrlkfwsldrlLVDKYRFSETDAREFAEFLVPLLDFTPEKRPtaqqclqhpwlslrnstrdetknksnvekvdvgmskleikvgk
Low Complexity Region (SEG)
MTIVEkklkrrakravaNISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNSTRDETKNKSNVEKVDVGMSKLEIKVGK
Disordered region (IsUnstruct)
******************ISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPE****AQQCLQHPWL********************************
Disordered Region (DISOPRED)
MTIVEKKLKRRAK***********************CLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDL******************YRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPW**************************L*I****
Disordered Region (DISEMBL)
**************AVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNSTRDETKNKSNVEKVDVGMSKLEIKVGK
Disordered Region (DISPRO)
MTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNSTRDETKNKS*V*KVDV***K*******
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNSTRDETKNKSNVEKVDVGMSKLEIKVGK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	237	2.2.26 [Sep-21-2011]
Q5RD27	655	SRSF protein kinase 1 OS=	yes	no	0.767	0.277	0.5	3e-52
Q96SB4	655	SRSF protein kinase 1 OS=	yes	no	0.767	0.277	0.5	3e-52
O70551	648	SRSF protein kinase 1 OS=	yes	no	0.691	0.253	0.524	2e-51
O54781	681	SRSF protein kinase 2 OS=	no	no	0.691	0.240	0.524	7e-51
P78362	688	SRSF protein kinase 2 OS=	no	no	0.691	0.238	0.524	1e-50
Q86A12	656	Probable serine/threonine	yes	no	0.683	0.246	0.552	9e-49
Q9UPE1	567	SRSF protein kinase 3 OS=	no	no	0.691	0.289	0.487	1e-46
B8Y466	566	SRSF protein kinase 3 OS=	no	no	0.691	0.289	0.493	1e-46
Q9Z0G2	565	SRSF protein kinase 3 OS=	no	no	0.691	0.290	0.487	2e-46
Q45FA5	426	Serine/threonine-protein	N/A	no	0.679	0.377	0.481	5e-44

>sp|Q5RD27|SRPK1_PONAB SRSF protein kinase 1 OS=Pongo abelii GN=SRPK1 PE=2 SV=2

 Score =  205 bits (521), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 91/182 (50%), Positives = 128/182 (70%)

Query: 25  SMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSV 84
           S  G  L  P    +   ++ K+ D GNAC  +K F E+IQTRQYR+ EV++ +GY+   
Sbjct: 473 STAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIGSGYNTPA 532

Query: 85  DMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFD 144
           D+WS AC AFELATGD LF P SG+ +  DEDH+AL++EL+GK+PRK+ + G  SK++F 
Sbjct: 533 DIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFT 592

Query: 145 RHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPW 204
           + GDLK I +LK W L  +LV+KY +S+ +A  F +FL+P+L+  PEKR TA +CL+HPW
Sbjct: 593 KKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRHPW 652

Query: 205 LS 206
           L+
Sbjct: 653 LN 654

Serine/arginine-rich protein-specific kinase which specifically phosphorylates its substrates at serine residues located in regions rich in arginine/serine dipeptides, known as RS domains and is involved in the phosphorylation of SR splicing factors and the regulation of splicing. Plays a central role in the regulatory network for splicing, controlling the intranuclear distribution of splicing factors in interphase cells and the reorganization of nuclear speckles during mitosis. Can influence additional steps of mRNA maturation, as well as other cellular activities, such as chromatin reorganization in somatic and sperm cells and cell cycle progression. Phosphorylates SFRS2, ZRSR2, LBR and PRM1. Phosphorylates SRSF1 using a directional (C-terminal to N-terminal) and a dual-track mechanism incorporating both processive phosphorylation (in which the kinase stays attached to the substrate after each round of phosphorylation) and distributive phosphorylation steps (in which the kinase and substrate dissociate after each phosphorylation event). The RS domain of SRSF1 binds first to a docking groove in the large lobe of the kinase domain of SRPK1. This induces certain structural changes in SRPK1 and/or RRM2 domain of SRSF1, allowing RRM2 to bind the kinase and initiate phosphorylation. The cycles continue for several phosphorylation steps in a processive manner (steps 1-8) until the last few phosphorylation steps (approximately steps 9-12). During that time, a mechanical stress induces the unfolding of the beta-4 motif in RRM2, which then docks at the docking groove of SRPK1. This also signals RRM2 to begin to dissociate, which facilitates SRSF1 dissociation after phosphorylation is completed. Can mediate hepatitis B virus (HBV) core protein phosphorylation. It plays a negative role in the regulation of HBV replication through a mechanism not involving the phosphorylation of the core protein but by reducing the packaging efficiency of the pregenomic RNA (pgRNA) without affecting the formation of the viral core particles. Can induce splicing of exon 10 in MAPT/TAU.
Pongo abelii (taxid: 9601)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1

>sp|Q96SB4|SRPK1_HUMAN SRSF protein kinase 1 OS=Homo sapiens GN=SRPK1 PE=1 SV=2

 Score =  204 bits (520), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 91/182 (50%), Positives = 128/182 (70%)

Query: 25  SMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSV 84
           S  G  L  P    +   ++ K+ D GNAC  +K F E+IQTRQYR+ EV++ +GY+   
Sbjct: 473 STAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIGSGYNTPA 532

Query: 85  DMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFD 144
           D+WS AC AFELATGD LF P SG+ +  DEDH+AL++EL+GK+PRK+ + G  SK++F 
Sbjct: 533 DIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFT 592

Query: 145 RHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPW 204
           + GDLK I +LK W L  +LV+KY +S+ +A  F +FL+P+L+  PEKR TA +CL+HPW
Sbjct: 593 KKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRHPW 652

Query: 205 LS 206
           L+
Sbjct: 653 LN 654

Serine/arginine-rich protein-specific kinase which specifically phosphorylates its substrates at serine residues located in regions rich in arginine/serine dipeptides, known as RS domains and is involved in the phosphorylation of SR splicing factors and the regulation of splicing. Plays a central role in the regulatory network for splicing, controlling the intranuclear distribution of splicing factors in interphase cells and the reorganization of nuclear speckles during mitosis. Can influence additional steps of mRNA maturation, as well as other cellular activities, such as chromatin reorganization in somatic and sperm cells and cell cycle progression. Isoform 2 phosphorylates SFRS2, ZRSR2, LBR and PRM1. Isoform 2 phosphorylates SRSF1 using a directional (C-terminal to N-terminal) and a dual-track mechanism incorporating both processive phosphorylation (in which the kinase stays attached to the substrate after each round of phosphorylation) and distributive phosphorylation steps (in which the kinase and substrate dissociate after each phosphorylation event). The RS domain of SRSF1 binds first to a docking groove in the large lobe of the kinase domain of SRPK1. This induces certain structural changes in SRPK1 and/or RRM2 domain of SRSF1, allowing RRM2 to bind the kinase and initiate phosphorylation. The cycles continue for several phosphorylation steps in a processive manner (steps 1-8) until the last few phosphorylation steps (approximately steps 9-12). During that time, a mechanical stress induces the unfolding of the beta-4 motif in RRM2, which then docks at the docking groove of SRPK1. This also signals RRM2 to begin to dissociate, which facilitates SRSF1 dissociation after phosphorylation is completed. Isoform 2 can mediate hepatitis B virus (HBV) core protein phosphorylation. It plays a negative role in the regulation of HBV replication through a mechanism not involving the phosphorylation of the core protein but by reducing the packaging efficiency of the pregenomic RNA (pgRNA) without affecting the formation of the viral core particles. Isoform 1 and isoform 2 can induce splicing of exon 10 in MAPT/TAU. The ratio of isoform 1/isoform 2 plays a decisive role in determining cell fate in K562 leukaemic cell line: isoform 2 favors proliferation where as isoform 1 favors differentiation.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O70551|SRPK1_MOUSE SRSF protein kinase 1 OS=Mus musculus GN=Srpk1 PE=1 SV=2

 Score =  202 bits (513), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 86/164 (52%), Positives = 122/164 (74%)

Query: 43  MRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDML 102
           ++ K+ D GNAC  +K F E+IQTRQYR+ EV++ +GY+   D+WS AC AFELATGD L
Sbjct: 484 LQVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYL 543

Query: 103 FAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDR 162
           F P SG+ +  DEDH+AL++EL+GK+PRK+ + G  SK++F + GDLK I +LK W L  
Sbjct: 544 FEPHSGEDYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLLE 603

Query: 163 LLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLS 206
           +LV+KY + + +A  F +FL+P+L+  PEKR TA +CL+HPWL+
Sbjct: 604 VLVEKYEWPQEEAAGFTDFLLPMLELMPEKRATAAECLRHPWLN 647

Serine/arginine-rich protein-specific kinase which specifically phosphorylates its substrates at serine residues located in regions rich in arginine/serine dipeptides, known as RS domains and is involved in the phosphorylation of SR splicing factors and the regulation of splicing. Plays a central role in the regulatory network for splicing, controlling the intranuclear distribution of splicing factors in interphase cells and the reorganization of nuclear speckles during mitosis. Can influence additional steps of mRNA maturation, as well as other cellular activities, such as chromatin reorganization in somatic and sperm cells and cell cycle progression. Phosphorylates SFRS2, ZRSR2, LBR and PRM1. Phosphorylates SRSF1 using a directional (C-terminal to N-terminal) and a dual-track mechanism incorporating both processive phosphorylation (in which the kinase stays attached to the substrate after each round of phosphorylation) and distributive phosphorylation steps (in which the kinase and substrate dissociate after each phosphorylation event). The RS domain of SRSF1 binds first to a docking groove in the large lobe of the kinase domain of SRPK1. This induces certain structural changes in SRPK1 and/or RRM2 domain of SRSF1, allowing RRM2 to bind the kinase and initiate phosphorylation. The cycles continue for several phosphorylation steps in a processive manner (steps 1-8) until the last few phosphorylation steps (approximately steps 9-12). During that time, a mechanical stress induces the unfolding of the beta-4 motif in RRM2, which then docks at the docking groove of SRPK1. This also signals RRM2 to begin to dissociate, which facilitates SRSF1 dissociation after phosphorylation is completed. Can mediate hepatitis B virus (HBV) core protein phosphorylation. It plays a negative role in the regulation of HBV replication through a mechanism not involving the phosphorylation of the core protein but by reducing the packaging efficiency of the pregenomic RNA (pgRNA) without affecting the formation of the viral core particles. Can induce splicing of exon 10 in MAPT/TAU.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O54781|SRPK2_MOUSE SRSF protein kinase 2 OS=Mus musculus GN=Srpk2 PE=1 SV=2

 Score =  200 bits (509), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 86/164 (52%), Positives = 121/164 (73%)

Query: 43  MRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDML 102
           +R K+ D GNAC  +K F E+IQTRQYR+ EV++ AGYS   D+WS AC AFELATGD L
Sbjct: 517 IRVKIADLGNACWVHKHFTEDIQTRQYRSIEVLIGAGYSTPADIWSTACMAFELATGDYL 576

Query: 103 FAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDR 162
           F P SG+ +  DEDH+A ++EL+G +PR  A+ G  S+++F+R G+L+ I +LK WSL  
Sbjct: 577 FEPHSGEDYSRDEDHIAHIIELLGSIPRHFALSGKYSREFFNRRGELRHITKLKPWSLFD 636

Query: 163 LLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLS 206
           +LV+KY +   DA +F +FL+P+L+  PEKR +A +CL+HPWL+
Sbjct: 637 VLVEKYGWPHEDAAQFTDFLIPMLEMVPEKRASAGECLRHPWLN 680

Serine/arginine-rich protein-specific kinase which specifically phosphorylates its substrates at serine residues located in regions rich in arginine/serine dipeptides, known as RS domains and is involved in the phosphorylation of SR splicing factors and the regulation of splicing. Promotes neuronal apoptosis by up-regulating cyclin-D1 (CCND1) expression. This is done by the phosphorylation of SRSF2, leading to the suppression of p53/TP53 phosphorylation thereby relieving the repressive effect of p53/TP53 on cyclin-D1 (CCND1) expression. Phosphorylates ACIN1, and redistributes it from the nuclear speckles to the nucleoplasm, resulting in cyclin A1 but not cyclin A2 up-regulation. Plays an essential role in splicesomal B complex formation via the phosphorylation of DDX23/PRP28.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|P78362|SRPK2_HUMAN SRSF protein kinase 2 OS=Homo sapiens GN=SRPK2 PE=1 SV=3

 Score =  199 bits (507), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 86/164 (52%), Positives = 121/164 (73%)

Query: 43  MRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDML 102
           +R K+ D GNAC  +K F E+IQTRQYR+ EV++ AGYS   D+WS AC AFELATGD L
Sbjct: 524 IRVKIADLGNACWVHKHFTEDIQTRQYRSIEVLIGAGYSTPADIWSTACMAFELATGDYL 583

Query: 103 FAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDR 162
           F P SG+ +  DEDH+A ++EL+G +PR  A+ G  S+++F+R G+L+ I +LK WSL  
Sbjct: 584 FEPHSGEDYSRDEDHIAHIIELLGSIPRHFALSGKYSREFFNRRGELRHITKLKPWSLFD 643

Query: 163 LLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLS 206
           +LV+KY +   DA +F +FL+P+L+  PEKR +A +CL+HPWL+
Sbjct: 644 VLVEKYGWPHEDAAQFTDFLIPMLEMVPEKRASAGECLRHPWLN 687

Serine/arginine-rich protein-specific kinase which specifically phosphorylates its substrates at serine residues located in regions rich in arginine/serine dipeptides, known as RS domains and is involved in the phosphorylation of SR splicing factors and the regulation of splicing. Promotes neuronal apoptosis by up-regulating cyclin-D1 (CCND1) expression. This is done by the phosphorylation of SRSF2, leading to the suppression of p53/TP53 phosphorylation thereby relieving the repressive effect of p53/TP53 on cyclin-D1 (CCND1) expression. Phosphorylates ACIN1, and redistributes it from the nuclear speckles to the nucleoplasm, resulting in cyclin A1 but not cyclin A2 up-regulation. Plays an essential role in splicesomal B complex formation via the phosphorylation of DDX23/PRP28. Can mediate hepatitis B virus (HBV) core protein phosphorylation. Plays a negative role in the regulation of HBV replication through a mechanism not involving the phosphorylation of the core protein but by reducing the packaging efficiency of the pregenomic RNA (pgRNA) without affecting the formation of the viral core particles.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q86A12|SKY1_DICDI Probable serine/threonine-protein kinase sky1 OS=Dictyostelium discoideum GN=sky1 PE=3 SV=1

 Score =  193 bits (491), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 90/163 (55%), Positives = 119/163 (73%), Gaps = 1/163 (0%)

Query: 44  RCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLF 103
           R ++VD GNAC  +K F ++IQTRQYRAPE I++A +   VD+WS AC AFELATGD LF
Sbjct: 486 RAQLVDLGNACWTDKHFTDDIQTRQYRAPEAIVKAKWGTPVDIWSAACMAFELATGDHLF 545

Query: 104 APKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLK-FWSLDR 162
            PKSG+GF + +DHLALM+EL+GK PR I  GG +S+ YF   GDL++I  L   W L  
Sbjct: 546 KPKSGKGFEKSDDHLALMIELLGKPPRFIFAGGDESRVYFTHKGDLRKIPDLSDQWPLFS 605

Query: 163 LLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 205
           +L +KY+FS  +A++F  FL+P+L++ PEKR TA+ CL H WL
Sbjct: 606 VLTEKYKFSIQEAKDFEAFLLPMLNYLPEKRATAKDCLNHTWL 648

Dictyostelium discoideum (taxid: 44689)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9UPE1|SRPK3_HUMAN SRSF protein kinase 3 OS=Homo sapiens GN=SRPK3 PE=2 SV=2

 Score =  186 bits (472), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 80/164 (48%), Positives = 115/164 (70%)

Query: 43  MRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDML 102
           ++ K+ D GNAC  +K F E+IQTRQYRA EV++ A Y    D+WS AC AFELATGD L
Sbjct: 403 IKIKIADLGNACWVHKHFTEDIQTRQYRAVEVLIGAEYGPPADIWSTACMAFELATGDYL 462

Query: 103 FAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDR 162
           F P SG+ +  DEDH+A ++EL+G +P   A+ G  S+++F+R G+L+ I  LK W L  
Sbjct: 463 FEPHSGEDYSRDEDHIAHIVELLGDIPPAFALSGRYSREFFNRRGELRHIHNLKHWGLYE 522

Query: 163 LLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLS 206
           +L++KY +    A +F+ FL+P++++ PEKR +A  CLQHPWL+
Sbjct: 523 VLMEKYEWPLEQATQFSAFLLPMMEYIPEKRASAADCLQHPWLN 566

Serine/arginine-rich protein-specific kinase which specifically phosphorylates its substrates at serine residues located in regions rich in arginine/serine dipeptides, known as RS domains. Phosphorylates the SR splicing factor SRSF1 and the lamin-B receptor (LBR) in vitro. Required for normal muscle development.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|B8Y466|SRPK3_PIG SRSF protein kinase 3 OS=Sus scrofa GN=SRPK3 PE=2 SV=1

 Score =  186 bits (472), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 81/164 (49%), Positives = 114/164 (69%)

Query: 43  MRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDML 102
           +R K+ D GNAC  +K F E IQTRQYRA EV++ A Y    D+WS AC AFELATGD L
Sbjct: 402 IRIKIADLGNACWVHKHFTEGIQTRQYRAVEVLIGAEYGPPADIWSTACMAFELATGDYL 461

Query: 103 FAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDR 162
           F P SG+ +  DEDH+A ++EL+G +P   A+ G  S+++F+R G+L+ I  LK W L  
Sbjct: 462 FEPHSGEDYSRDEDHIAHIVELLGDIPPAFALSGRYSREFFNRRGELRHIHNLKHWGLYE 521

Query: 163 LLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLS 206
           +L++KY +    A +F+ FL+P++++ PEKR +A  CLQHPWL+
Sbjct: 522 VLMEKYEWPLEQATQFSAFLLPMMEYIPEKRASAADCLQHPWLN 565

Serine/arginine-rich protein-specific kinase which specifically phosphorylates its substrates at serine residues located in regions rich in arginine/serine dipeptides, known as RS domains. Phosphorylates the SR splicing factor SRSF1 and the lamin-B receptor (LBR) in vitro. Required for normal muscle development.

Sus scrofa (taxid: 9823)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9Z0G2|SRPK3_MOUSE SRSF protein kinase 3 OS=Mus musculus GN=Srpk3 PE=2 SV=1

 Score =  186 bits (471), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 80/164 (48%), Positives = 115/164 (70%)

Query: 43  MRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDML 102
           ++ K+ D GNAC  +K F E+IQTRQYRA EV++ A Y    D+WS AC AFELATGD L
Sbjct: 401 IKIKIADLGNACWVHKHFTEDIQTRQYRAVEVLIGAEYGPPADIWSTACMAFELATGDYL 460

Query: 103 FAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDR 162
           F P SG+ +  DEDH+A ++EL+G +P   A+ G  S+++F+R G+L+ I  LK W L  
Sbjct: 461 FEPHSGEDYSRDEDHIAHIVELLGDIPPAFALSGRYSREFFNRRGELRHIPNLKHWGLYE 520

Query: 163 LLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLS 206
           +L++KY +    A +F+ FL+P++++ PEKR +A  CLQHPWL+
Sbjct: 521 VLMEKYEWPLEQATQFSAFLLPMMEYIPEKRASAADCLQHPWLN 564

Serine/arginine-rich protein-specific kinase which specifically phosphorylates its substrates at serine residues located in regions rich in arginine/serine dipeptides, known as RS domains. Phosphorylates the SR splicing factor SRSF1 and the lamin-B receptor (LBR) in vitro. Required for normal muscle development.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q45FA5|SRPK_PHYPO Serine/threonine-protein kinase SRPK OS=Physarum polycephalum PE=1 SV=1

 Score =  177 bits (450), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 78/162 (48%), Positives = 114/162 (70%), Gaps = 1/162 (0%)

Query: 46  KVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAP 105
           K+ D G AC  +K F +++QTRQYR PEVIL   +  ++DMWS AC  FELATGD+LF P
Sbjct: 259 KIADLGTACWTHKHFTDDVQTRQYRCPEVILGQKWDTTIDMWSLACMVFELATGDLLFCP 318

Query: 106 KSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRL-KFWSLDRLL 164
           K G  + + +DHLALM+EL+G+MPR     G++S+ YF+  G+LK IR+L   W +  +L
Sbjct: 319 KKGDKYDKTDDHLALMIELLGRMPRSFITKGSKSEKYFNSKGELKYIRKLGPQWGMSDVL 378

Query: 165 VDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLS 206
            +KYRF + +A + + FL+P+L + PEKR TA+  L+HP+++
Sbjct: 379 YEKYRFPKEEADKLSAFLLPMLQYEPEKRATARDSLEHPYMA 420

Phosphorylates serine/arginine-rich protein PSR.

Physarum polycephalum (taxid: 5791)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	237
224084119	442	predicted protein [Populus trichocarpa]	0.987	0.529	0.827	1e-110
225438452	444	PREDICTED: serine/threonine-protein kina	0.983	0.524	0.803	1e-109
255561431	445	srpk, putative [Ricinus communis] gi|223	0.991	0.528	0.779	1e-107
147806137	463	hypothetical protein VITISV_038749 [Viti	0.970	0.496	0.800	1e-107
356531335	445	PREDICTED: serine/threonine-protein kina	0.995	0.530	0.783	1e-106
356531337	460	PREDICTED: serine/threonine-protein kina	0.995	0.513	0.783	1e-106
224114475	442	predicted protein [Populus trichocarpa]	0.987	0.529	0.789	1e-106
449434086	444	PREDICTED: SRSF protein kinase 1-like [C	0.995	0.531	0.773	1e-105
356559181	445	PREDICTED: serine/threonine-protein kina	0.995	0.530	0.771	1e-104
356496553	445	PREDICTED: probable serine/threonine-pro	0.995	0.530	0.755	1e-101

>gi|224084119|ref|XP_002307217.1| predicted protein [Populus trichocarpa] gi|222856666|gb|EEE94213.1| predicted protein [Populus trichocarpa]

 Score =  403 bits (1036), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 196/237 (82%), Positives = 215/237 (90%), Gaps = 3/237 (1%)

Query: 1   MTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQF 60
           MT++EKKLKRRAKRAVA IS RR SMGG  + KPER LDGID+RCKVVDFGNAC A+KQF
Sbjct: 209 MTLIEKKLKRRAKRAVAKISGRRVSMGG-AVQKPERSLDGIDVRCKVVDFGNACWADKQF 267

Query: 61  AEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLAL 120
           AEEIQTRQYRAPEVILR+GYSFSVDMWSFACTAFELATGDMLFAPK GQ + EDEDHLAL
Sbjct: 268 AEEIQTRQYRAPEVILRSGYSFSVDMWSFACTAFELATGDMLFAPKDGQDYSEDEDHLAL 327

Query: 121 MMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAE 180
           MMEL+GKMPRKIAIGGA SKDYFDRHGDLKRIRRLKFW LDRLLV+KY+FSE DAREFAE
Sbjct: 328 MMELLGKMPRKIAIGGALSKDYFDRHGDLKRIRRLKFWPLDRLLVEKYKFSENDAREFAE 387

Query: 181 FLVPLLDFTPEKRPTAQQCLQHPWLSLRNSTRDETKNKSNVEKVDVGMSKLEIKVGK 237
           FL PL DFTPEKRPTAQQCLQHPWL+L++ST++ETK++S V K+ VG+S L  KVGK
Sbjct: 388 FLCPLFDFTPEKRPTAQQCLQHPWLNLKSSTQNETKSESKVAKLGVGVSNL--KVGK 442

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225438452|ref|XP_002277212.1| PREDICTED: serine/threonine-protein kinase SRPK2 [Vitis vinifera] gi|296082557|emb|CBI21562.3| unnamed protein product [Vitis vinifera]

 Score =  399 bits (1025), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 188/234 (80%), Positives = 215/234 (91%), Gaps = 1/234 (0%)

Query: 4   VEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQFAEE 63
           +EKKLK RA+RAVA IS +RASMGG E PK ER LDGID+RCK+VDFGNAC A++QF  E
Sbjct: 212 IEKKLKARARRAVAKISGKRASMGG-ETPKAERSLDGIDVRCKIVDFGNACWADRQFTGE 270

Query: 64  IQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMME 123
           IQTRQYRAPEV+L+AGYS SVDMWSFACTAFELATGDMLFAPK+GQG+ EDEDHLALMME
Sbjct: 271 IQTRQYRAPEVVLQAGYSTSVDMWSFACTAFELATGDMLFAPKNGQGYSEDEDHLALMME 330

Query: 124 LIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLV 183
           L+GK+PRK+AIGGA+SKD FDRHGDLKRIRRLKFW LDR+LVD+Y+FSE+DAREFA+FLV
Sbjct: 331 LLGKIPRKVAIGGARSKDLFDRHGDLKRIRRLKFWPLDRILVDRYKFSESDAREFADFLV 390

Query: 184 PLLDFTPEKRPTAQQCLQHPWLSLRNSTRDETKNKSNVEKVDVGMSKLEIKVGK 237
           PLLDF PEKRPTAQQCLQHPWL+L N   +ETK+KSN+EK+DVGMSKL+I+VGK
Sbjct: 391 PLLDFAPEKRPTAQQCLQHPWLNLTNLAANETKSKSNMEKLDVGMSKLQIEVGK 444

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255561431|ref|XP_002521726.1| srpk, putative [Ricinus communis] gi|223539117|gb|EEF40713.1| srpk, putative [Ricinus communis]

 Score =  394 bits (1013), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 184/236 (77%), Positives = 213/236 (90%), Gaps = 1/236 (0%)

Query: 1   MTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQF 60
           M ++E+KLKRRAKRAVA IS RRASMGG  + K E+CLDG+D+RCK+VDFGNAC A+KQF
Sbjct: 210 MNLIERKLKRRAKRAVAKISERRASMGG-AMTKQEKCLDGVDVRCKIVDFGNACWADKQF 268

Query: 61  AEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLAL 120
           AEEIQTRQYRAPEV+L++GYSF VDMWSFACTAFELATGDM+FAPK GQGF EDEDHLAL
Sbjct: 269 AEEIQTRQYRAPEVVLQSGYSFPVDMWSFACTAFELATGDMMFAPKGGQGFSEDEDHLAL 328

Query: 121 MMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAE 180
           MMEL+GKMPRKIAIGGA SKD+FDR+GDLKRIRRLKFW LDRLLVDKY+FSE DA+EFAE
Sbjct: 329 MMELLGKMPRKIAIGGANSKDFFDRYGDLKRIRRLKFWPLDRLLVDKYKFSENDAKEFAE 388

Query: 181 FLVPLLDFTPEKRPTAQQCLQHPWLSLRNSTRDETKNKSNVEKVDVGMSKLEIKVG 236
           FL PLLDF PEKRPTAQQCLQHPWL+LR+ST+ +  N+++V K+ VG+S L++ VG
Sbjct: 389 FLCPLLDFVPEKRPTAQQCLQHPWLNLRSSTQTQMGNEADVGKLQVGVSNLQLTVG 444

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147806137|emb|CAN70006.1| hypothetical protein VITISV_038749 [Vitis vinifera]

 Score =  393 bits (1009), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 185/231 (80%), Positives = 212/231 (91%), Gaps = 1/231 (0%)

Query: 4   VEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQFAEE 63
           +EKKLK RA+RAVA IS +RASMGG E PK ER LDGID+RCK+VDFGNAC A++QF  E
Sbjct: 214 IEKKLKARARRAVAKISGKRASMGG-ETPKAERSLDGIDVRCKIVDFGNACWADRQFTGE 272

Query: 64  IQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMME 123
           IQTRQYRAPEV+L+AGYS SVDMWSFACTAFELATGDMLFAPK+GQG+ EDEDHLALMME
Sbjct: 273 IQTRQYRAPEVVLQAGYSTSVDMWSFACTAFELATGDMLFAPKNGQGYSEDEDHLALMME 332

Query: 124 LIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLV 183
           L+GK+PRK+AIGGA+SKD FDRHGDLKRIRRLKFW LDR+LVD+Y+FSE+DAREFA+FLV
Sbjct: 333 LLGKIPRKVAIGGARSKDLFDRHGDLKRIRRLKFWPLDRILVDRYKFSESDAREFADFLV 392

Query: 184 PLLDFTPEKRPTAQQCLQHPWLSLRNSTRDETKNKSNVEKVDVGMSKLEIK 234
           PLLDF PEKRPTAQQCLQHPWL+L N   +ETK+KSN+EK+DVGMSKL+I+
Sbjct: 393 PLLDFAPEKRPTAQQCLQHPWLNLTNLAANETKSKSNMEKLDVGMSKLQIE 443

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356531335|ref|XP_003534233.1| PREDICTED: serine/threonine-protein kinase SRPK1-like isoform 1 [Glycine max]

 Score =  390 bits (1002), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 185/236 (78%), Positives = 207/236 (87%)

Query: 2   TIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQFA 61
           +++EKKLKRRA+RAVA IS R + +GGIE PK ER LDGID+RCKVVDFGNAC A+KQFA
Sbjct: 210 SLIEKKLKRRARRAVAKISGRSSPIGGIEAPKSERNLDGIDVRCKVVDFGNACWADKQFA 269

Query: 62  EEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALM 121
           EEIQTRQYRAPEVIL AGYSFSVDMWSFAC AFELATGDMLF PK GQGF EDEDHLALM
Sbjct: 270 EEIQTRQYRAPEVILHAGYSFSVDMWSFACIAFELATGDMLFTPKDGQGFSEDEDHLALM 329

Query: 122 MELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEF 181
           MEL+GKMPRK+A  GA+SKD+FDRHGDL+RIRRLKFW L +LLV +Y+FSE DA EF+EF
Sbjct: 330 MELLGKMPRKVATSGAKSKDFFDRHGDLRRIRRLKFWPLSKLLVVRYKFSERDAHEFSEF 389

Query: 182 LVPLLDFTPEKRPTAQQCLQHPWLSLRNSTRDETKNKSNVEKVDVGMSKLEIKVGK 237
           L PLLDF PEKRPTAQQCLQHPWL    ST +E +N+S+VEKVDVGMS L+IKVGK
Sbjct: 390 LSPLLDFAPEKRPTAQQCLQHPWLQGIESTPNEMRNESSVEKVDVGMSNLQIKVGK 445

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356531337|ref|XP_003534234.1| PREDICTED: serine/threonine-protein kinase SRPK1-like isoform 2 [Glycine max]

 Score =  390 bits (1001), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 185/236 (78%), Positives = 207/236 (87%)

Query: 2   TIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQFA 61
           +++EKKLKRRA+RAVA IS R + +GGIE PK ER LDGID+RCKVVDFGNAC A+KQFA
Sbjct: 225 SLIEKKLKRRARRAVAKISGRSSPIGGIEAPKSERNLDGIDVRCKVVDFGNACWADKQFA 284

Query: 62  EEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALM 121
           EEIQTRQYRAPEVIL AGYSFSVDMWSFAC AFELATGDMLF PK GQGF EDEDHLALM
Sbjct: 285 EEIQTRQYRAPEVILHAGYSFSVDMWSFACIAFELATGDMLFTPKDGQGFSEDEDHLALM 344

Query: 122 MELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEF 181
           MEL+GKMPRK+A  GA+SKD+FDRHGDL+RIRRLKFW L +LLV +Y+FSE DA EF+EF
Sbjct: 345 MELLGKMPRKVATSGAKSKDFFDRHGDLRRIRRLKFWPLSKLLVVRYKFSERDAHEFSEF 404

Query: 182 LVPLLDFTPEKRPTAQQCLQHPWLSLRNSTRDETKNKSNVEKVDVGMSKLEIKVGK 237
           L PLLDF PEKRPTAQQCLQHPWL    ST +E +N+S+VEKVDVGMS L+IKVGK
Sbjct: 405 LSPLLDFAPEKRPTAQQCLQHPWLQGIESTPNEMRNESSVEKVDVGMSNLQIKVGK 460

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224114475|ref|XP_002332363.1| predicted protein [Populus trichocarpa] gi|222874680|gb|EEF11811.1| predicted protein [Populus trichocarpa]

 Score =  389 bits (999), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 187/237 (78%), Positives = 211/237 (89%), Gaps = 3/237 (1%)

Query: 1   MTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQF 60
           M ++EKKLKRRAKRAVANIS RR SMGG  + K ER LDG+D+RCKVVDFGNAC A KQF
Sbjct: 209 MNLIEKKLKRRAKRAVANISGRRDSMGG-AMQKSERSLDGVDVRCKVVDFGNACWAVKQF 267

Query: 61  AEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLAL 120
           A+EIQTRQYRAPEVIL++GYSFSVDMWSFACTAFELATGDMLFAPK GQG+ EDEDHLAL
Sbjct: 268 AKEIQTRQYRAPEVILQSGYSFSVDMWSFACTAFELATGDMLFAPKDGQGYSEDEDHLAL 327

Query: 121 MMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAE 180
           MMEL+GKMPRKIAIGGA SKDYFDRHGDLKRIRRLKFW LDRLLV+KY+F ETDA+E AE
Sbjct: 328 MMELLGKMPRKIAIGGALSKDYFDRHGDLKRIRRLKFWPLDRLLVEKYKFPETDAQEIAE 387

Query: 181 FLVPLLDFTPEKRPTAQQCLQHPWLSLRNSTRDETKNKSNVEKVDVGMSKLEIKVGK 237
           FL PLLDFTPE RPTAQQCLQHPW ++++ +++E  ++SNVEK+ VG+S L  KVGK
Sbjct: 388 FLCPLLDFTPENRPTAQQCLQHPWFNIKSCSQNEMTSESNVEKLGVGVSNL--KVGK 442

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449434086|ref|XP_004134827.1| PREDICTED: SRSF protein kinase 1-like [Cucumis sativus] gi|449491257|ref|XP_004158842.1| PREDICTED: SRSF protein kinase 1-like [Cucumis sativus]

 Score =  386 bits (992), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 184/238 (77%), Positives = 210/238 (88%), Gaps = 2/238 (0%)

Query: 1   MTIVEKKLKRRAKRAVANISIRRASMGGIELPKPE-RCLDGIDMRCKVVDFGNACRANKQ 59
           M ++EKKLKRRA+RAV+ IS RR SMGG   PKPE R LDGID+RCK+VDFGNAC A++Q
Sbjct: 208 MNLIEKKLKRRARRAVSRISERRVSMGGAT-PKPEDRKLDGIDLRCKIVDFGNACWADRQ 266

Query: 60  FAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLA 119
           F EEIQTRQYRAPEVIL++GYS+SVDMWSF C AFELATGDM+F PK GQ + EDEDHLA
Sbjct: 267 FMEEIQTRQYRAPEVILQSGYSYSVDMWSFGCIAFELATGDMMFTPKGGQDYSEDEDHLA 326

Query: 120 LMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFA 179
           LMMEL+GKMPRKIAIGGA+SKDYFDRHGDLKRIRRLKFWSLDRLLV+KY+F+E DA+ FA
Sbjct: 327 LMMELLGKMPRKIAIGGARSKDYFDRHGDLKRIRRLKFWSLDRLLVEKYKFTEADAQSFA 386

Query: 180 EFLVPLLDFTPEKRPTAQQCLQHPWLSLRNSTRDETKNKSNVEKVDVGMSKLEIKVGK 237
           EFL  +LDF PEKRPTAQQCLQHPWL+ RN  + E KNK+ VEKV+VGMSKL+I+VGK
Sbjct: 387 EFLSLVLDFAPEKRPTAQQCLQHPWLNPRNLPQTEMKNKTEVEKVNVGMSKLQIRVGK 444

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356559181|ref|XP_003547879.1| PREDICTED: serine/threonine-protein kinase SRPK1-like [Glycine max]

 Score =  384 bits (986), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 182/236 (77%), Positives = 208/236 (88%)

Query: 2   TIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQFA 61
           +++EKKLKRRA+RAVA IS R + +GGIE PK +R LDGID+RCKVVDFGNAC A+KQFA
Sbjct: 210 SLIEKKLKRRARRAVAKISGRSSPIGGIEAPKSDRNLDGIDVRCKVVDFGNACWADKQFA 269

Query: 62  EEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALM 121
           EEIQTRQYRAPEVIL+AGYSF+VDMWSFAC AFELATGDMLF PK GQGF EDEDHLALM
Sbjct: 270 EEIQTRQYRAPEVILQAGYSFAVDMWSFACIAFELATGDMLFTPKVGQGFSEDEDHLALM 329

Query: 122 MELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEF 181
           MEL+GKMPRK+A  GA+SKD+FDRHGDLKRIRRLKFW L +LL+D+Y+FSE DA EF+EF
Sbjct: 330 MELLGKMPRKVATSGAKSKDFFDRHGDLKRIRRLKFWPLSKLLIDRYKFSERDACEFSEF 389

Query: 182 LVPLLDFTPEKRPTAQQCLQHPWLSLRNSTRDETKNKSNVEKVDVGMSKLEIKVGK 237
           L+PLLDF PEKRPTAQQCLQ PWL    ST +E +N+S+VEKV VGMS L+IKVGK
Sbjct: 390 LLPLLDFAPEKRPTAQQCLQLPWLQGIESTPNEMRNESSVEKVGVGMSNLQIKVGK 445

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356496553|ref|XP_003517131.1| PREDICTED: probable serine/threonine-protein kinase sky1-like [Glycine max]

 Score =  373 bits (958), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 179/237 (75%), Positives = 205/237 (86%), Gaps = 1/237 (0%)

Query: 2   TIVEKKLKRRAKRAVANISIRRASMGGI-ELPKPERCLDGIDMRCKVVDFGNACRANKQF 60
           +++EK+L+RRA+ AVA IS RRASMGGI +  K  R +DGID+RCK+VDFGNAC A+KQF
Sbjct: 209 SLIEKRLRRRARTAVAKISGRRASMGGIGDAAKTGRNIDGIDVRCKIVDFGNACWADKQF 268

Query: 61  AEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLAL 120
           AEEIQTRQYRAPEVIL+AGYSFSVDMWS AC AFELATGDMLF PK GQGF EDEDHLAL
Sbjct: 269 AEEIQTRQYRAPEVILKAGYSFSVDMWSLACIAFELATGDMLFTPKGGQGFSEDEDHLAL 328

Query: 121 MMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAE 180
           MMEL+GKMPRKIA GGAQSKD+FDRHGDLKRIRRLKF  LD+LL DKY+FS  DA+EF+E
Sbjct: 329 MMELLGKMPRKIATGGAQSKDFFDRHGDLKRIRRLKFCPLDKLLTDKYKFSVNDAQEFSE 388

Query: 181 FLVPLLDFTPEKRPTAQQCLQHPWLSLRNSTRDETKNKSNVEKVDVGMSKLEIKVGK 237
           FL+PL DF PEKRPTA+QCLQHPWL+   S  +E +N+S VEKVDVGMS L+I+V K
Sbjct: 389 FLLPLFDFAPEKRPTARQCLQHPWLNYMESPPNEMRNESAVEKVDVGMSNLKIRVEK 445

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	237
TAIR|locus:2053938	440	AT2G17530 [Arabidopsis thalian	0.953	0.513	0.686	6.4e-83
TAIR|locus:2127903	439	AT4G35500 [Arabidopsis thalian	0.953	0.514	0.694	5.8e-82
TAIR|locus:2085151	529	SRPK4 "ser/arg-rich protein ki	0.822	0.368	0.571	2.1e-61
TAIR|locus:2172651	538	AT5G22840 [Arabidopsis thalian	0.911	0.401	0.529	1.7e-59
TAIR|locus:2082107	534	AT3G44850 [Arabidopsis thalian	0.725	0.322	0.610	1.9e-58
UNIPROTKB|B4DS61	639	SRPK1 "SFRS protein kinase 1,	0.767	0.284	0.5	3.7e-48
UNIPROTKB|H3BLV9	671	SRPK1 "SRSF protein kinase 1"	0.767	0.271	0.5	3.7e-48
UNIPROTKB|Q96SB4	655	SRPK1 "SRSF protein kinase 1"	0.767	0.277	0.5	3.7e-48
UNIPROTKB|Q5RD27	655	SRPK1 "SRSF protein kinase 1"	0.767	0.277	0.5	3.7e-48
UNIPROTKB|H7C5L6	295	SRPK2 "SRSF protein kinase 2"	0.691	0.555	0.548	4.7e-48

TAIR|locus:2053938 AT2G17530 [Arabidopsis thaliana (taxid:3702)]

 Score = 831 (297.6 bits), Expect = 6.4e-83, P = 6.4e-83
 Identities = 162/236 (68%), Positives = 189/236 (80%)

Query:     1 MTIVEXXXXXXXXXXXXNISIRRASMGGI-ELPKP-ERCLDGIDMRCKVVDFGNACRANK 58
             M ++E             IS RR S+ G+ E PK  +R LDGIDMRCKVVDFGN C A+ 
Sbjct:   209 MNLIEKKLKRRAKKAAAKISGRRVSIVGLSETPKKNKRNLDGIDMRCKVVDFGNGCWADN 268

Query:    59 QFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHL 118
             +FAEEIQTRQYRAPEVIL++GYS+SVDMWSFACTAFELATGDMLFAPK G G+ EDEDHL
Sbjct:   269 KFAEEIQTRQYRAPEVILQSGYSYSVDMWSFACTAFELATGDMLFAPKEGNGYGEDEDHL 328

Query:   119 ALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREF 178
             ALMMEL+GKMPRKIAIGGA+SKDYFDRHGDLKRIRRLK+W LDRLL+DKY+  E +AREF
Sbjct:   329 ALMMELLGKMPRKIAIGGARSKDYFDRHGDLKRIRRLKYWPLDRLLIDKYKLPEAEAREF 388

Query:   179 AEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNSTRDETKNKSNVEKVDVGMSKLEIK 234
             A+FL P++DF PEKRPTAQQCLQHPWL+LR      T+N  N + ++  MS ++IK
Sbjct:   389 ADFLCPIMDFAPEKRPTAQQCLQHPWLNLR------TQN--NEDDIEGQMSNMQIK 436

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2127903 AT4G35500 [Arabidopsis thaliana (taxid:3702)]

 Score = 822 (294.4 bits), Expect = 5.8e-82, P = 5.8e-82
 Identities = 164/236 (69%), Positives = 184/236 (77%)

Query:     1 MTIVEXXXXXXXXXXXXNISIRRASM-GGIELP-KPERCLDGIDMRCKVVDFGNACRANK 58
             M ++E             IS RR SM  G E   K E+ LDGIDMRCKVVDFGNAC A+K
Sbjct:   211 MNLIEKKLKRRAKRAVAKISERRVSMVTGEEASSKTEKSLDGIDMRCKVVDFGNACWADK 270

Query:    59 QFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHL 118
             QFAEEIQTRQYRAPEVIL++GYSFSVDMWSF CTAFEL TGDMLFAPK G G+ EDEDHL
Sbjct:   271 QFAEEIQTRQYRAPEVILKSGYSFSVDMWSFGCTAFELVTGDMLFAPKDGNGYGEDEDHL 330

Query:   119 ALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREF 178
             ALMMEL+GKMPRKIAIGGA+SKDYFDRHGDLKRIRRLK+W LDRLL+DKY+  E +A+EF
Sbjct:   331 ALMMELLGKMPRKIAIGGAKSKDYFDRHGDLKRIRRLKYWPLDRLLIDKYKLPEAEAKEF 390

Query:   179 AEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNSTRDETKNKSNVEKVDVGMSKLEIK 234
             AEFL P+L+F PEKRPTAQQCL HPW+   N T   T+N  + E VD  M+ L IK
Sbjct:   391 AEFLTPILEFAPEKRPTAQQCLDHPWM---NVT---TQN--DAENVDDQMNNLHIK 438

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2085151 SRPK4 "ser/arg-rich protein kinase 4" [Arabidopsis thaliana (taxid:3702)]

 Score = 628 (226.1 bits), Expect = 2.1e-61, P = 2.1e-61
 Identities = 116/203 (57%), Positives = 150/203 (73%)

Query:    42 DMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDM 101
             D++CK+VDFGNAC   KQF  +IQTRQYR PEVIL + YS S D+WSFAC  FEL TGD+
Sbjct:   303 DLKCKLVDFGNACWTYKQFTSDIQTRQYRCPEVILGSKYSTSADLWSFACICFELVTGDV 362

Query:   102 LFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLD 161
             LF P SG  +  DEDHLALMMEL+G MPRKIA+GG  S+D+F+RHGDL+ IRRL+FW ++
Sbjct:   363 LFDPHSGDNYDRDEDHLALMMELLGMMPRKIALGGRYSRDFFNRHGDLRHIRRLRFWPMN 422

Query:   162 RLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL-----SLRNSTRDETK 216
             ++L +KY FSE DA + ++FLV +LDF PEKRPTA QCL HPW+     S++ S +DE  
Sbjct:   423 KVLTEKYEFSEQDANDLSDFLVSILDFVPEKRPTAAQCLLHPWINSGPRSIKPSLKDENS 482

Query:   217 NKSNVEK---VDVGMSKLEIKVG 236
             +K + EK    +     +E+K+G
Sbjct:   483 DKLDTEKNKRENEEQEAVEVKMG 505

GO:0004672 "protein kinase activity" evidence=IEA;IDA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;IDA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0006979 "response to oxidative stress" evidence=IDA

TAIR|locus:2172651 AT5G22840 [Arabidopsis thaliana (taxid:3702)]

 Score = 610 (219.8 bits), Expect = 1.7e-59, P = 1.7e-59
 Identities = 118/223 (52%), Positives = 153/223 (68%)

Query:    18 NISIR-RASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVIL 76
             N+S + R +  G +  + ++ L  +D +CK+VDFGNAC   KQF  +IQTRQYR PEV+L
Sbjct:   283 NVSQKSRGNRRGSQSTR-QKLLADVDRKCKLVDFGNACWTYKQFTSDIQTRQYRCPEVVL 341

Query:    77 RAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGG 136
              + YS S DMWSFAC  FELATGD+LF P SG+ F  DEDHLALMMEL+G MPRKIA+GG
Sbjct:   342 GSKYSTSADMWSFACICFELATGDVLFDPHSGENFERDEDHLALMMELLGMMPRKIALGG 401

Query:   137 AQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTA 196
               S+D+F+R G+L+ IRRL+FW L ++L DKY FSE DA    +F+ P+L F PEKRPTA
Sbjct:   402 RHSRDFFNRQGELRHIRRLRFWPLSKVLTDKYDFSEEDAIAMQDFITPILQFVPEKRPTA 461

Query:   197 QQCLQHPWL-----SLRNSTRDETKNKSNVEKVDVGMSKLEIK 234
              QCL HPWL     SL+ S+  +   +   E  D    K +++
Sbjct:   462 AQCLTHPWLNPVPKSLKPSSSPQNPKEEEEEASDEDKDKEKVE 504

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0009560 "embryo sac egg cell differentiation" evidence=RCA

TAIR|locus:2082107 AT3G44850 [Arabidopsis thaliana (taxid:3702)]

 Score = 600 (216.3 bits), Expect = 1.9e-58, P = 1.9e-58
 Identities = 105/172 (61%), Positives = 136/172 (79%)

Query:    35 ERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAF 94
             ++ L  I+ +CK+VDFGNAC   KQF  +IQTRQYR PEV+L + YS S DMWSFAC  F
Sbjct:   311 QKLLSDIECKCKLVDFGNACWTYKQFTSDIQTRQYRCPEVVLGSKYSTSADMWSFACICF 370

Query:    95 ELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRR 154
             ELATGD+LF P SG+ +  DEDHLALMMEL+G MPRKIA+GG  S+D+F+R G+L+ IRR
Sbjct:   371 ELATGDVLFDPHSGENYDRDEDHLALMMELLGMMPRKIALGGRYSRDFFNRQGELRHIRR 430

Query:   155 LKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLS 206
             L+FW + ++L +KY FSE DA++ ++FLV +L+F PEKRPTA QCL+HPW +
Sbjct:   431 LRFWPISKVLKEKYDFSEQDAKDMSDFLVTILEFVPEKRPTAAQCLKHPWFN 482

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0009506 "plasmodesma" evidence=IDA

GO:0009165 "nucleotide biosynthetic process" evidence=RCA

UNIPROTKB|B4DS61 SRPK1 "SFRS protein kinase 1, isoform CRA_f" [Homo sapiens (taxid:9606)]

 Score = 503 (182.1 bits), Expect = 3.7e-48, P = 3.7e-48
 Identities = 91/182 (50%), Positives = 128/182 (70%)

Query:    25 SMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSV 84
             S  G  L  P    +   ++ K+ D GNAC  +K F E+IQTRQYR+ EV++ +GY+   
Sbjct:   457 STAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIGSGYNTPA 516

Query:    85 DMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFD 144
             D+WS AC AFELATGD LF P SG+ +  DEDH+AL++EL+GK+PRK+ + G  SK++F 
Sbjct:   517 DIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFT 576

Query:   145 RHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPW 204
             + GDLK I +LK W L  +LV+KY +S+ +A  F +FL+P+L+  PEKR TA +CL+HPW
Sbjct:   577 KKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRHPW 636

Query:   205 LS 206
             L+
Sbjct:   637 LN 638

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=IDA

UNIPROTKB|H3BLV9 SRPK1 "SRSF protein kinase 1" [Homo sapiens (taxid:9606)]

 Score = 503 (182.1 bits), Expect = 3.7e-48, P = 3.7e-48
 Identities = 91/182 (50%), Positives = 128/182 (70%)

Query:    25 SMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSV 84
             S  G  L  P    +   ++ K+ D GNAC  +K F E+IQTRQYR+ EV++ +GY+   
Sbjct:   489 STAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIGSGYNTPA 548

Query:    85 DMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFD 144
             D+WS AC AFELATGD LF P SG+ +  DEDH+AL++EL+GK+PRK+ + G  SK++F 
Sbjct:   549 DIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFT 608

Query:   145 RHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPW 204
             + GDLK I +LK W L  +LV+KY +S+ +A  F +FL+P+L+  PEKR TA +CL+HPW
Sbjct:   609 KKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRHPW 668

Query:   205 LS 206
             L+
Sbjct:   669 LN 670

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|Q96SB4 SRPK1 "SRSF protein kinase 1" [Homo sapiens (taxid:9606)]

 Score = 503 (182.1 bits), Expect = 3.7e-48, P = 3.7e-48
 Identities = 91/182 (50%), Positives = 128/182 (70%)

Query:    25 SMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSV 84
             S  G  L  P    +   ++ K+ D GNAC  +K F E+IQTRQYR+ EV++ +GY+   
Sbjct:   473 STAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIGSGYNTPA 532

Query:    85 DMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFD 144
             D+WS AC AFELATGD LF P SG+ +  DEDH+AL++EL+GK+PRK+ + G  SK++F 
Sbjct:   533 DIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFT 592

Query:   145 RHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPW 204
             + GDLK I +LK W L  +LV+KY +S+ +A  F +FL+P+L+  PEKR TA +CL+HPW
Sbjct:   593 KKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRHPW 652

Query:   205 LS 206
             L+
Sbjct:   653 LN 654

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0006397 "mRNA processing" evidence=IEA

GO:0008380 "RNA splicing" evidence=IEA

GO:0019048 "virus-host interaction" evidence=IEA

GO:0016363 "nuclear matrix" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IDA

GO:0007243 "intracellular protein kinase cascade" evidence=IDA

GO:0006468 "protein phosphorylation" evidence=IDA

GO:0005524 "ATP binding" evidence=IDA

GO:0000287 "magnesium ion binding" evidence=IDA

GO:0050684 "regulation of mRNA processing" evidence=IDA

GO:0005634 "nucleus" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0007059 "chromosome segregation" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0048024 "regulation of mRNA splicing, via spliceosome" evidence=TAS

GO:0035092 "sperm chromatin condensation" evidence=TAS

GO:0004672 "protein kinase activity" evidence=TAS

GO:0045087 "innate immune response" evidence=IC

GO:0045071 "negative regulation of viral genome replication" evidence=IDA

GO:0045070 "positive regulation of viral genome replication" evidence=IDA

UNIPROTKB|Q5RD27 SRPK1 "SRSF protein kinase 1" [Pongo abelii (taxid:9601)]

 Score = 503 (182.1 bits), Expect = 3.7e-48, P = 3.7e-48
 Identities = 91/182 (50%), Positives = 128/182 (70%)

Query:    25 SMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSV 84
             S  G  L  P    +   ++ K+ D GNAC  +K F E+IQTRQYR+ EV++ +GY+   
Sbjct:   473 STAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIGSGYNTPA 532

Query:    85 DMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFD 144
             D+WS AC AFELATGD LF P SG+ +  DEDH+AL++EL+GK+PRK+ + G  SK++F 
Sbjct:   533 DIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFT 592

Query:   145 RHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPW 204
             + GDLK I +LK W L  +LV+KY +S+ +A  F +FL+P+L+  PEKR TA +CL+HPW
Sbjct:   593 KKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRHPW 652

Query:   205 LS 206
             L+
Sbjct:   653 LN 654

GO:0000287 "magnesium ion binding" evidence=ISS

GO:0004674 "protein serine/threonine kinase activity" evidence=ISS

GO:0005524 "ATP binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISS

GO:0006468 "protein phosphorylation" evidence=ISS

GO:0007059 "chromosome segregation" evidence=ISS

GO:0007243 "intracellular protein kinase cascade" evidence=ISS

GO:0050684 "regulation of mRNA processing" evidence=ISS

UNIPROTKB|H7C5L6 SRPK2 "SRSF protein kinase 2" [Homo sapiens (taxid:9606)]

 Score = 502 (181.8 bits), Expect = 4.7e-48, P = 4.7e-48
 Identities = 90/164 (54%), Positives = 123/164 (75%)

Query:    43 MRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDML 102
             +R K+ D GNAC  +K F E+IQTRQYR+ EV++ AGYS   D+WS AC AFELATGD L
Sbjct:   131 IRVKIADLGNACWVHKHFTEDIQTRQYRSIEVLIGAGYSTPADIWSTACMAFELATGDYL 190

Query:   103 FAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDR 162
             F P SG+ +  DEDH+AL++EL+GK+PRK A+ G  SK++F R G+L+ I +LK WSL  
Sbjct:   191 FEPHSGEDYSRDEDHIALIIELLGKVPRKYAMLGKYSKEFFTRKGELRHITKLKPWSLFD 250

Query:   163 LLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLS 206
             +LV+KY +   DA +F +FL+P+L+  PEKR +A +CL+HPWL+
Sbjct:   251 VLVEKYGWPHEDAAQFTDFLIPMLEMVPEKRASAGECLRHPWLN 294

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
4th Layer	2.7.11.1	LOW CONFIDENCE prediction!
3rd Layer	2.7.11	LOW CONFIDENCE prediction!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: fgenesh4_pg.C_LG_V000420 hypothetical protein (442 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	237
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	2e-26
cd07830	283	cd07830, STKc_MAK_like, Catalytic domain of Male g	7e-22
cd07833	288	cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep	1e-21
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	1e-21
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	1e-18
cd07829	282	cd07829, STKc_CDK_like, Catalytic domain of Cyclin	3e-18
cd07834	330	cd07834, STKc_MAPK, Catalytic domain of the Serine	3e-18
cd07852	337	cd07852, STKc_MAPK15, Catalytic domain of the Seri	1e-17
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	2e-17
cd07851	343	cd07851, STKc_p38, Catalytic domain of the Serine/	6e-17
cd07836	284	cd07836, STKc_Pho85, Catalytic domain of the Serin	3e-16
PTZ00284	467	PTZ00284, PTZ00284, protein kinase; Provisional	5e-16
cd07849	336	cd07849, STKc_ERK1_2_like, Catalytic domain of Ext	2e-15
cd07831	282	cd07831, STKc_MOK, Catalytic domain of the Serine/	1e-14
cd07880	343	cd07880, STKc_p38gamma_MAPK12, Catalytic domain of	2e-14
cd05118	283	cd05118, STKc_CMGC, Catalytic domain of CMGC famil	2e-14
cd05123	250	cd05123, STKc_AGC, Catalytic domain of AGC family	2e-14
cd07838	287	cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc	4e-14
cd07857	332	cd07857, STKc_MPK1, Catalytic domain of the Serine	5e-14
cd07855	334	cd07855, STKc_ERK5, Catalytic domain of the Serine	1e-13
cd07848	287	cd07848, STKc_CDKL5, Catalytic domain of the Serin	1e-13
cd07866	311	cd07866, STKc_BUR1, Catalytic domain of the Serine	2e-13
cd07841	298	cd07841, STKc_CDK7, Catalytic domain of the Serine	3e-13
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	5e-13
cd07856	328	cd07856, STKc_Sty1_Hog1, Catalytic domain of the S	2e-12
cd07840	287	cd07840, STKc_CDK9_like, Catalytic domain of Cycli	4e-12
cd07850	353	cd07850, STKc_JNK, Catalytic domain of the Serine/	9e-12
cd07853	372	cd07853, STKc_NLK, Catalytic domain of the Serine/	1e-11
cd07858	337	cd07858, STKc_TEY_MAPK_plant, Catalytic domain of	1e-11
cd07844	291	cd07844, STKc_PCTAIRE_like, Catalytic domain of PC	1e-11
cd07837	295	cd07837, STKc_CdkB_plant, Catalytic domain of the	3e-11
cd07879	342	cd07879, STKc_p38delta_MAPK13, Catalytic domain of	4e-11
cd07877	345	cd07877, STKc_p38alpha_MAPK14, Catalytic domain of	4e-11
cd07832	286	cd07832, STKc_CCRK, Catalytic domain of the Serine	4e-11
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	4e-11
cd07878	343	cd07878, STKc_p38beta_MAPK11, Catalytic domain of	6e-11
cd07876	359	cd07876, STKc_JNK2, Catalytic domain of the Serine	2e-10
cd07874	355	cd07874, STKc_JNK3, Catalytic domain of the Serine	3e-10
cd07875	364	cd07875, STKc_JNK1, Catalytic domain of the Serine	4e-10
cd07859	338	cd07859, STKc_TDY_MAPK_plant, Catalytic domain of	4e-10
cd07863	288	cd07863, STKc_CDK4, Catalytic domain of the Serine	1e-09
cd07843	293	cd07843, STKc_CDC2L1, Catalytic domain of the Seri	1e-09
cd06626	264	cd06626, STKc_MEKK4, Catalytic domain of the Prote	1e-09
cd05572	262	cd05572, STKc_cGK_PKG, Catalytic domain of the Pro	2e-09
cd07873	301	cd07873, STKc_PCTAIRE1, Catalytic domain of the Se	2e-09
cd07854	342	cd07854, STKc_MAPK4_6, Catalytic domain of the Ser	2e-09
cd07872	309	cd07872, STKc_PCTAIRE2, Catalytic domain of the Se	2e-09
cd07845	309	cd07845, STKc_CDK10, Catalytic domain of the Serin	3e-09
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	3e-09
cd06632	258	cd06632, STKc_MEKK1_plant, Catalytic domain of the	3e-09
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	3e-09
cd06610	267	cd06610, STKc_OSR1_SPAK, Catalytic domain of the P	3e-09
cd07835	283	cd07835, STKc_CDK1_like, Catalytic domain of Cycli	5e-09
cd07860	284	cd07860, STKc_CDK2_3, Catalytic domain of the Seri	6e-09
cd07842	316	cd07842, STKc_CDK8_like, Catalytic domain of Cycli	7e-09
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	7e-09
cd07839	284	cd07839, STKc_CDK5, Catalytic domain of the Serine	2e-08
cd06609	274	cd06609, STKc_MST3_like, Catalytic domain of Mamma	2e-08
cd07846	286	cd07846, STKc_CDKL2_3, Catalytic domain of the Ser	3e-08
cd07847	286	cd07847, STKc_CDKL1_4, Catalytic domain of the Ser	4e-08
cd05579	265	cd05579, STKc_MAST_like, Catalytic domain of Micro	4e-08
cd07861	285	cd07861, STKc_CDK1_euk, Catalytic domain of the Se	1e-07
cd05578	258	cd05578, STKc_Yank1, Catalytic domain of the Prote	1e-07
cd05580	290	cd05580, STKc_PKA, Catalytic domain of the Protein	1e-07
cd07871	288	cd07871, STKc_PCTAIRE3, Catalytic domain of the Se	2e-07
cd06623	264	cd06623, PKc_MAPKK_plant_like, Catalytic domain of	2e-07
cd06608	275	cd06608, STKc_myosinIII_like, Catalytic domain of	3e-07
cd05581	280	cd05581, STKc_PDK1, Catalytic domain of the Protei	3e-07
PTZ00024	335	PTZ00024, PTZ00024, cyclin-dependent protein kinas	3e-07
PHA03212	391	PHA03212, PHA03212, serine/threonine kinase US3; P	5e-07
PLN00009	294	PLN00009, PLN00009, cyclin-dependent kinase A; Pro	6e-07
cd06624	268	cd06624, STKc_ASK, Catalytic domain of the Protein	1e-06
cd05582	318	cd05582, STKc_RSK_N, N-terminal catalytic domain o	1e-06
cd07869	303	cd07869, STKc_PFTAIRE1, Catalytic domain of the Se	2e-06
cd05577	277	cd05577, STKc_GRK, Catalytic domain of the Protein	2e-06
cd06621	287	cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of	2e-06
cd06631	265	cd06631, STKc_YSK4, Catalytic domain of the Protei	3e-06
cd08530	256	cd08530, STKc_CNK2-like, Catalytic domain of the P	4e-06
cd07862	290	cd07862, STKc_CDK6, Catalytic domain of the Serine	4e-06
cd07864	302	cd07864, STKc_CDK12, Catalytic domain of the Serin	7e-06
cd05607	277	cd05607, STKc_GRK7, Catalytic domain of the Protei	1e-05
cd05600	333	cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fun	1e-05
cd05593	328	cd05593, STKc_PKB_gamma, Catalytic domain of the P	2e-05
PHA03209	357	PHA03209, PHA03209, serine/threonine kinase US3; P	2e-05
cd08217	265	cd08217, STKc_Nek2, Catalytic domain of the Protei	2e-05
cd06644	292	cd06644, STKc_STK10_LOK, Catalytic domain of the P	3e-05
cd05620	316	cd05620, STKc_nPKC_delta, Catalytic domain of the	3e-05
cd06630	268	cd06630, STKc_MEKK1, Catalytic domain of the Prote	4e-05
cd06657	292	cd06657, STKc_PAK4, Catalytic domain of the Protei	5e-05
cd06613	262	cd06613, STKc_MAP4K3_like, Catalytic domain of Mit	5e-05
PTZ00036	440	PTZ00036, PTZ00036, glycogen synthase kinase; Prov	8e-05
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	8e-05
cd06658	292	cd06658, STKc_PAK5, Catalytic domain of the Protei	9e-05
cd07870	291	cd07870, STKc_PFTAIRE2, Catalytic domain of the Se	1e-04
cd05592	316	cd05592, STKc_nPKC_theta_delta, Catalytic domain o	1e-04
cd06654	296	cd06654, STKc_PAK1, Catalytic domain of the Protei	1e-04
cd05571	323	cd05571, STKc_PKB, Catalytic domain of the Protein	2e-04
cd07868	317	cd07868, STKc_CDK8, Catalytic domain of the Serine	2e-04
cd06629	272	cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o	2e-04
cd06605	265	cd06605, PKc_MAPKK, Catalytic domain of the dual-s	2e-04
cd06622	286	cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of	2e-04
cd05594	325	cd05594, STKc_PKB_alpha, Catalytic domain of the P	2e-04
cd06656	297	cd06656, STKc_PAK3, Catalytic domain of the Protei	3e-04
cd05611	260	cd05611, STKc_Rim15_like, Catalytic domain of fung	3e-04
cd06640	277	cd06640, STKc_MST4, Catalytic domain of the Protei	3e-04
cd06615	308	cd06615, PKc_MEK, Catalytic domain of the dual-spe	4e-04
cd07867	317	cd07867, STKc_CDC2L6, Catalytic domain of Serine/T	4e-04
cd06642	277	cd06642, STKc_STK25-YSK1, Catalytic domain of the	5e-04
cd06611	280	cd06611, STKc_SLK_like, Catalytic domain of Ste20-	5e-04
cd05612	291	cd05612, STKc_PRKX_like, Catalytic domain of PRKX-	6e-04
cd05585	312	cd05585, STKc_YPK1_like, Catalytic domain of Yeast	7e-04
cd08224	267	cd08224, STKc_Nek6_Nek7, Catalytic domain of the P	8e-04
cd05609	305	cd05609, STKc_MAST, Catalytic domain of the Protei	8e-04
cd06637	272	cd06637, STKc_TNIK, Catalytic domain of the Protei	9e-04
cd06625	263	cd06625, STKc_MEKK3_like, Catalytic domain of MAP/	9e-04
PTZ00263	329	PTZ00263, PTZ00263, protein kinase A catalytic sub	0.001
cd06659	297	cd06659, STKc_PAK6, Catalytic domain of the Protei	0.001
cd06655	296	cd06655, STKc_PAK2, Catalytic domain of the Protei	0.001
cd05570	318	cd05570, STKc_PKC, Catalytic domain of the Protein	0.001
cd06647	293	cd06647, STKc_PAK_I, Catalytic domain of the Prote	0.001
cd05587	324	cd05587, STKc_cPKC, Catalytic domain of the Protei	0.002
cd05586	330	cd05586, STKc_Sck1_like, Catalytic domain of Suppr	0.002
cd05584	323	cd05584, STKc_p70S6K, Catalytic domain of the Prot	0.002
cd05616	323	cd05616, STKc_cPKC_beta, Catalytic domain of the P	0.002
cd06648	285	cd06648, STKc_PAK_II, Catalytic domain of the Prot	0.002
cd06917	277	cd06917, STKc_NAK1_like, Catalytic domain of Funga	0.002
cd08223	257	cd08223, STKc_Nek4, Catalytic domain of the Protei	0.003
cd05595	323	cd05595, STKc_PKB_beta, Catalytic domain of the Pr	0.003
cd06616	288	cd06616, PKc_MKK4, Catalytic domain of the dual-sp	0.003
cd05574	316	cd05574, STKc_phototropin_like, Catalytic domain o	0.003
cd05599	364	cd05599, STKc_NDR_like, Catalytic domain of Nuclea	0.003
cd05630	285	cd05630, STKc_GRK6, Catalytic domain of the Protei	0.004
cd05619	316	cd05619, STKc_nPKC_theta, Catalytic domain of the	0.004
PTZ00426	340	PTZ00426, PTZ00426, cAMP-dependent protein kinase	0.004
cd06620	284	cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of	0.004

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score =  102 bits (256), Expect = 2e-26
 Identities = 48/175 (27%), Positives = 69/175 (39%), Gaps = 46/175 (26%)

Query: 33  KPERCLDGIDMRCKVVDFGNACRAN--KQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFA 90
           KPE  L   D   K+ DFG A + +  ++    + T +Y APEV+L  GY  +VD+WS  
Sbjct: 124 KPENILLDEDGHVKLADFGLARQLDPGEKLTTFVGTPEYMAPEVLLGKGYGKAVDIWSLG 183

Query: 91  CTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLK 150
              +EL TG   F           +D L  + + IGK                       
Sbjct: 184 VILYELLTGKPPF---------PGDDQLLELFKKIGKPK--------------------- 213

Query: 151 RIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 205
                 F         ++  S     E  + +  LL   PEKR TA++ LQHP+ 
Sbjct: 214 ----PPFPP------PEWDISP----EAKDLIRKLLVKDPEKRLTAEEALQHPFF 254

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

 Score = 90.7 bits (226), Expect = 7e-22
 Identities = 54/181 (29%), Positives = 80/181 (44%), Gaps = 31/181 (17%)

Query: 33  KPERCLDGIDMRCKVVDFGNA--CRANKQFAEEIQTRQYRAPEVILRAG-YSFSVDMWSF 89
           KPE  L       K+ DFG A   R+   + + + TR YRAPE++LR+  YS  VD+W+ 
Sbjct: 126 KPENLLVSGPEVVKIADFGLAREIRSRPPYTDYVSTRWYRAPEILLRSTSYSSPVDIWAL 185

Query: 90  ACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDL 149
            C   EL T   LF   S      + D L  +  ++G  P         +K  +     L
Sbjct: 186 GCIMAELYTLRPLFPGSS------EIDQLYKICSVLGT-P---------TKQDWPEGYKL 229

Query: 150 KRIRRLKF-----WSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPW 204
                 +F      SL +L+ +          E  + +  +L + P+KRPTA Q LQHP+
Sbjct: 230 ASKLGFRFPQFAPTSLHQLIPNASP-------EAIDLIKDMLRWDPKKRPTASQALQHPY 282

Query: 205 L 205
            
Sbjct: 283 F 283

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283

>gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

 Score = 90.5 bits (225), Expect = 1e-21
 Identities = 49/182 (26%), Positives = 73/182 (40%), Gaps = 29/182 (15%)

Query: 33  KPERCLDGIDMRCKVVDFGNA----CRANKQFAEEIQTRQYRAPEVILRAG-YSFSVDMW 87
           KPE  L       K+ DFG A     R      + + TR YRAPE+++    Y   VD+W
Sbjct: 127 KPENILVSESGVLKLCDFGFARALRARPASPLTDYVATRWYRAPELLVGDTNYGKPVDVW 186

Query: 88  SFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHG 147
           +  C   EL  G+ LF   S      D D L L+ + +G +P                H 
Sbjct: 187 AIGCIMAELLDGEPLFPGDS------DIDQLYLIQKCLGPLP--------------PSHQ 226

Query: 148 DL----KRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHP 203
           +L     R   + F    +    + R+    +    +FL   L   P++R T  + LQHP
Sbjct: 227 ELFSSNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQHP 286

Query: 204 WL 205
           + 
Sbjct: 287 YF 288

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score = 89.6 bits (223), Expect = 1e-21
 Identities = 46/177 (25%), Positives = 65/177 (36%), Gaps = 45/177 (25%)

Query: 33  KPERCLDGIDMRCKVVDFGNACRA--NKQFAEEIQ-TRQYRAPEVILRA-GYSFSVDMWS 88
           KPE  L   +   K+ DFG A +   +         T  Y APEV+L   GY   VD+WS
Sbjct: 125 KPENILLDENGVVKIADFGLAKKLLKSSSSLTTFVGTPWYMAPEVLLGGNGYGPKVDVWS 184

Query: 89  FACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGD 148
                +EL TG   F+ +                                     +    
Sbjct: 185 LGVILYELLTGKPPFSGE-------------------------------------NILDQ 207

Query: 149 LKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 205
           L+ IRR+    L   L        + + E  + +   L+  P KRPTA++ LQHPW 
Sbjct: 208 LQLIRRI----LGPPLEFDEPKWSSGSEEAKDLIKKCLNKDPSKRPTAEEILQHPWF 260

Length = 260

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score = 81.5 bits (202), Expect = 1e-18
 Identities = 47/161 (29%), Positives = 63/161 (39%), Gaps = 47/161 (29%)

Query: 46  KVVDFGNACRANKQFAEE--IQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLF 103
           K++DFG + + +   A    + T  + APEVI    Y +  D+WS   TA ELA G    
Sbjct: 138 KLIDFGLSAQLSDTKARNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEG---- 193

Query: 104 APKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRL 163
            P     + E     AL           IA  G               +R  + WS    
Sbjct: 194 KPP----YSELPPMKALFK---------IATNGP------------PGLRNPEKWSD--- 225

Query: 164 LVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPW 204
                        EF +FL   L   PEKRPTA+Q L+HP+
Sbjct: 226 -------------EFKDFLKKCLQKNPEKRPTAEQLLKHPF 253

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

 Score = 81.0 bits (201), Expect = 3e-18
 Identities = 53/191 (27%), Positives = 82/191 (42%), Gaps = 51/191 (26%)

Query: 33  KPERCLDGIDMRCKVVDFGNACRA----NKQFAEEIQTRQYRAPEVILRA-GYSFSVDMW 87
           KP+  L   D   K+ DFG A RA     + +  E+ T  YRAPE++L +  YS +VD+W
Sbjct: 125 KPQNILINRDGVLKLADFGLA-RAFGIPLRTYTHEVVTLWYRAPEILLGSKHYSTAVDIW 183

Query: 88  SFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIG-----------KMPRKIAIGG 136
           S  C   E+ TG  LF   S      + D L  + +++G           K+P       
Sbjct: 184 SVGCIFAEMITGKPLFPGDS------EIDQLFKIFQILGTPTEESWPGVTKLPDY----- 232

Query: 137 AQSKDYFDRHG--DLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRP 194
              K  F +    DL+++       LD   +D               L  +L + P KR 
Sbjct: 233 ---KPTFPKFPPKDLEKV----LPRLDPEGID--------------LLSKMLQYNPAKRI 271

Query: 195 TAQQCLQHPWL 205
           +A++ L+HP+ 
Sbjct: 272 SAKEALKHPYF 282

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282

>gnl|CDD|173737 cd07834, STKc_MAPK, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

 Score = 81.8 bits (203), Expect = 3e-18
 Identities = 49/179 (27%), Positives = 78/179 (43%), Gaps = 28/179 (15%)

Query: 46  KVVDFGNACRANKQFAEEIQ------TRQYRAPEVILRA-GYSFSVDMWSFACTAFELAT 98
           K+ DFG A   +    E+        TR YRAPE++L +  Y+ ++D+WS  C   EL T
Sbjct: 143 KICDFGLARGVDPDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLT 202

Query: 99  GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKI--AIGGAQSKDYFDRHGDLKRIRRLK 156
              LF  +         D L L++E++G    +    I   ++++Y        +     
Sbjct: 203 RKPLFPGRDYI------DQLNLIVEVLGTPSEEDLKFITSEKARNYLKSLPKKPKK---- 252

Query: 157 FWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNSTRDET 215
              L +L      F      E  + L  +L F P+KR TA + L HP+L+  +   DE 
Sbjct: 253 --PLSKL------FPGASP-EAIDLLEKMLVFDPKKRITADEALAHPYLAQLHDPEDEP 302

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPK kinase (MAP2K or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAP3K or MKKK). Each cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. There are three main typical MAPK subfamilies: Extracellular signal-Regulated Kinase (ERK), c-Jun N-terminal Kinase (JNK), and p38. Some MAPKs are atypical in that they are not regulated by MAP2Ks. These include MAPK4, MAPK6, NLK, and ERK7. Length = 330

>gnl|CDD|173747 cd07852, STKc_MAPK15, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

 Score = 79.9 bits (198), Expect = 1e-17
 Identities = 53/196 (27%), Positives = 83/196 (42%), Gaps = 36/196 (18%)

Query: 33  KPERCLDGIDMRCKVVDFGNA--------CRANKQFAEEIQTRQYRAPEVILRAG-YSFS 83
           KP   L   D R K+ DFG A           N    + + TR YRAPE++L +  Y+  
Sbjct: 134 KPSNILLNSDCRVKLADFGLARSLSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKG 193

Query: 84  VDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYF 143
           VDMWS  C   E+  G  LF   S        + L  ++E+IG    +            
Sbjct: 194 VDMWSVGCILGEMLLGKPLFPGTSTL------NQLEKIIEVIGPPSAE------------ 235

Query: 144 DRHGDLKRIRRLKFWSLDRLLVDKYRFSETDA-----REFAEFLVPLLDFTPEKRPTAQQ 198
               D++ I+     ++   L  + R    +       +  + L  LL F P KR TA++
Sbjct: 236 ----DIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEE 291

Query: 199 CLQHPWLSLRNSTRDE 214
            L+HP+++  ++  DE
Sbjct: 292 ALEHPYVAQFHNPSDE 307

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimuli whereas ERK8 shows low basal activity and is activated by DNA-damaging agents. ERK7 and ERK8 also have different substrate profiles. Genome analysis shows that they are orthologs with similar gene structures. ERK7 and ERK 8 may be involved in the signaling of some nuclear receptor transcription factors. ERK7 regulates hormone-dependent degradation of estrogen receptor alpha while ERK8 down-regulates the transcriptional co-activation androgen and glucocorticoid receptors. Length = 337

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score = 78.0 bits (193), Expect = 2e-17
 Identities = 46/167 (27%), Positives = 60/167 (35%), Gaps = 50/167 (29%)

Query: 44  RCKVVDFGNACRANKQFAEEIQ-----TRQYRAPEVILRAGYSFSVDMWSFACTAFELAT 98
             K+ DFG A R       E       T  + APEVI    Y  + D+WS  CT  E+AT
Sbjct: 139 VVKLADFGCAKRLGDIETGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMAT 198

Query: 99  GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFW 158
           G     P     + E  + +A +            IG +        H            
Sbjct: 199 GK---PP-----WSELGNPMAALY----------KIGSSGEPPEIPEH------------ 228

Query: 159 SLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 205
                       SE    E  +FL   L   P+KRPTA + LQHP+L
Sbjct: 229 -----------LSE----EAKDFLRKCLRRDPKKRPTADELLQHPFL 260

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|143356 cd07851, STKc_p38, Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

 Score = 78.1 bits (193), Expect = 6e-17
 Identities = 51/170 (30%), Positives = 80/170 (47%), Gaps = 18/170 (10%)

Query: 46  KVVDFGNACRANKQFAEEIQTRQYRAPEVIL-RAGYSFSVDMWSFACTAFELATGDMLFA 104
           K++DFG A   + +    + TR YRAPE++L    Y+ +VD+WS  C   EL TG  LF 
Sbjct: 158 KILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLF- 216

Query: 105 PKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLL 164
           P S     +  D L  +M L+G  P +  +    S+   +    L ++ +  F  +    
Sbjct: 217 PGS-----DHIDQLKRIMNLVGT-PDEELLQKISSESARNYIQSLPQMPKKDFKEV---- 266

Query: 165 VDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNSTRDE 214
                FS  +     + L  +L   P+KR TA + L HP+L+  +   DE
Sbjct: 267 -----FSGANP-LAIDLLEKMLVLDPDKRITAAEALAHPYLAEYHDPEDE 310

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. p38 substrates include other protein kinases and factors that regulate transcription, nuclear export, mRNA stability and translation. p38 kinases are drug targets for the inflammatory diseases psoriasis, rheumatoid arthritis, and chronic pulmonary disease. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta, which show varying substrate specificity and expression patterns. p38alpha and p38beta are ubiquitously expressed, p38gamma is predominantly found in skeletal muscle, and p38delta is found in the heart, lung, testis, pancreas, and small intestine. Length = 343

>gnl|CDD|143341 cd07836, STKc_Pho85, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

 Score = 75.6 bits (186), Expect = 3e-16
 Identities = 59/183 (32%), Positives = 81/183 (44%), Gaps = 37/183 (20%)

Query: 33  KPERCLDGIDMRCKVVDFGNACRA-----NKQFAEEIQTRQYRAPEVILRA-GYSFSVDM 86
           KP+  L       K+ DFG A RA     N  F+ E+ T  YRAP+V+L +  YS S+D+
Sbjct: 127 KPQNLLINKRGELKLADFGLA-RAFGIPVNT-FSNEVVTLWYRAPDVLLGSRTYSTSIDI 184

Query: 87  WSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDY---F 143
           WS  C   E+ TG  LF   +      +ED L  +  ++G        G +Q  +Y   F
Sbjct: 185 WSVGCIMAEMITGRPLFPGTN------NEDQLLKIFRIMGTPTESTWPGISQLPEYKPTF 238

Query: 144 DR--HGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ 201
            R    DL+++    F   D L +D               L  LL   PE R +A   LQ
Sbjct: 239 PRYPPQDLQQL----FPHADPLGID--------------LLHRLLQLNPELRISAHDALQ 280

Query: 202 HPW 204
           HPW
Sbjct: 281 HPW 283

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. It is not essential for yeast viability and is the functional homolog of mammalian CDK5, which plays a role in central nervous system development. Length = 284

>gnl|CDD|140307 PTZ00284, PTZ00284, protein kinase; Provisional

 Score = 76.2 bits (187), Expect = 5e-16
 Identities = 52/189 (27%), Positives = 85/189 (44%), Gaps = 41/189 (21%)

Query: 31  LPKPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFA 90
           LP P+ C      R ++ D G  C         + TR YR+PEV+L  G+ +S DMWS  
Sbjct: 280 LP-PDPC------RVRICDLGGCCDERHSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMG 332

Query: 91  CTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAI--GGAQSKDYFDRHGD 148
           C  +EL TG +L+         ++ +HL LM + +G++P + A   G  +++  ++  G 
Sbjct: 333 CIIYELYTGKLLYDTH------DNLEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQ 386

Query: 149 LK------------RIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTA 196
           L+            R R ++    D LL D               +  LL +  +KR  A
Sbjct: 387 LRPCTDPKHLARIARARPVREVIRDDLLCD--------------LIYGLLHYDRQKRLNA 432

Query: 197 QQCLQHPWL 205
           +Q   HP++
Sbjct: 433 RQMTTHPYV 441

Length = 467

>gnl|CDD|143354 cd07849, STKc_ERK1_2_like, Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

 Score = 73.5 bits (181), Expect = 2e-15
 Identities = 50/179 (27%), Positives = 83/179 (46%), Gaps = 30/179 (16%)

Query: 46  KVVDFGNACRANKQ------FAEEIQTRQYRAPEVILR-AGYSFSVDMWSFACTAFELAT 98
           K+ DFG A  A+ +        E + TR YRAPE++L   GY+ ++D+WS  C   E+ +
Sbjct: 146 KICDFGLARIADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLS 205

Query: 99  GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKI---AIGGAQSKDYFDRHGDLKRIRRL 155
              LF  K      +    L L++ ++G  P +     I   ++++Y         I+ L
Sbjct: 206 NRPLFPGK------DYLHQLNLILGVLGT-PSQEDLNCIISLRARNY---------IKSL 249

Query: 156 KFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNSTRDE 214
            F    ++  +K  F   D +   + L  +L F P KR T ++ L HP+L   +   DE
Sbjct: 250 PFKP--KVPWNKL-FPNADPKAL-DLLDKMLTFNPHKRITVEEALAHPYLEQYHDPSDE 304

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase kinase from the Raf family. ERK1/2 have numerous substrates, many of which are nuclear and participate in transcriptional regulation of many cellular processes. They regulate cell growth, cell proliferation, and cell cycle progression from G1 to S phase. Although the distinct roles of ERK1 and ERK2 have not been fully determined, it is known that ERK2 can maintain most functions in the absence of ERK1, and that the deletion of ERK2 is embryonically lethal. The MAPK, Fus3, regulates yeast mating processes including mating-specific gene expression, G1 arrest, mating projection, and cell fusion. Length = 336

>gnl|CDD|173735 cd07831, STKc_MOK, Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

 Score = 70.8 bits (174), Expect = 1e-14
 Identities = 51/177 (28%), Positives = 81/177 (45%), Gaps = 27/177 (15%)

Query: 33  KPERCLDGIDMRC-KVVDFGNACRANKQ--FAEEIQTRQYRAPEVILRAG-YSFSVDMWS 88
           KPE  L  I     K+ DFG+      +  + E I TR YRAPE +L  G Y   +D+W+
Sbjct: 127 KPENIL--IKDDILKLADFGSCRGIYSKPPYTEYISTRWYRAPECLLTDGYYGPKMDIWA 184

Query: 89  FACTAFELATGDMLFAPKSGQGFCEDE-DHLALMMELIGKMPRKIAIGGAQSKDYFDRHG 147
             C  FE+ +   LF      G   +E D +A + +++G    ++       K    RH 
Sbjct: 185 VGCVFFEILSLFPLF-----PG--TNELDQIAKIHDVLGTPDAEV-----LKKFRKSRHM 232

Query: 148 DLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPW 204
           +     +     L +LL +        + E  + L  LL + P++R TA+Q L+HP+
Sbjct: 233 NYNFPSKKGTG-LRKLLPNA-------SAEGLDLLKKLLAYDPDERITAKQALRHPY 281

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. Length = 282

>gnl|CDD|143385 cd07880, STKc_p38gamma_MAPK12, Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

 Score = 71.1 bits (174), Expect = 2e-14
 Identities = 57/179 (31%), Positives = 81/179 (45%), Gaps = 24/179 (13%)

Query: 42  DMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWSFACTAFELATGD 100
           D   K++DFG A + + +    + TR YRAPEVIL    Y+ +VD+WS  C   E+ TG 
Sbjct: 154 DCELKILDFGLARQTDSEMTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGK 213

Query: 101 MLFAPKSGQGFCEDEDHLALMMEL--IGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFW 158
            LF         +  DHL  +ME+  +   P K  +   QS+D  +    L R R+  F 
Sbjct: 214 PLF---------KGHDHLDQLMEIMKVTGTPSKEFVQKLQSEDAKNYVKKLPRFRKKDFR 264

Query: 159 SLDRLLVDKYRFSETDAREFA-EFLVPLLDFTPEKRPTAQQCLQHPWLSLRNSTRDETK 216
           SL             +A   A   L  +L    E R TA + L HP+    +   DET+
Sbjct: 265 SL-----------LPNANPLAVNVLEKMLVLDAESRITAAEALAHPYFEEFHDPEDETE 312

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12, is predominantly expressed in skeletal muscle. Unlike p38alpha and p38beta, p38gamma is insensitive to pyridinylimidazoles. It displays an antagonizing function compared to p38alpha. p38gamma inhibits, while p38alpha stimulates, c-Jun phosphorylation and AP-1 mediated transcription. p38gamma also plays a role in the signaling between Ras and the estrogen receptor and has been implicated to increase cell invasion and breast cancer progression. In Xenopus, p38gamma is critical in the meiotic maturation of oocytes. Length = 343

>gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases

 Score = 70.4 bits (173), Expect = 2e-14
 Identities = 49/183 (26%), Positives = 73/183 (39%), Gaps = 34/183 (18%)

Query: 33  KPERCLDGIDMRC--KVVDFGNACRA----NKQFAEEIQTRQYRAPEVILRA-GYSFSVD 85
           KPE  L  I+     K+ DFG   R+     + +   + TR YRAPE++L   GYS  VD
Sbjct: 125 KPENLL--INTEGVLKLADFG-LARSFGSPVRPYTHYVVTRWYRAPELLLGDKGYSTPVD 181

Query: 86  MWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDR 145
           +WS  C   EL +   LF  KS      + D L  +   +G    ++          +  
Sbjct: 182 IWSVGCIFAELLSRRPLFPGKS------EIDQLFKIFRTLGTPDPEVWPKFTSLARNY-- 233

Query: 146 HGDLKRIRRLKFW---SLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQH 202
                            L +L  +    +   A    + L  +L + P KR TA+Q L H
Sbjct: 234 ------KFSFPKKAGMPLPKLFPN----ASPQAL---DLLSQMLHYDPHKRITAEQALAH 280

Query: 203 PWL 205
           P+ 
Sbjct: 281 PYF 283

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283

>gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases

 Score = 69.9 bits (172), Expect = 2e-14
 Identities = 44/179 (24%), Positives = 59/179 (32%), Gaps = 56/179 (31%)

Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQ----TRQYRAPEVILRAGYSFSVDMWS 88
           KPE  L   D   K+ DFG   +              T +Y APEV+L  GY  +VD WS
Sbjct: 120 KPENILLDADGHIKLTDFG-LAKELSSEGSRTNTFCGTPEYLAPEVLLGKGYGKAVDWWS 178

Query: 89  FACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGD 148
                +E+ TG   F       + ED      + E I                       
Sbjct: 179 LGVLLYEMLTGKPPF-------YAEDR---KEIYEKI----------------------- 205

Query: 149 LKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPT---AQQCLQHPW 204
                          L D  RF E  + E  + +  LL   P KR     A++   HP+
Sbjct: 206 ---------------LKDPLRFPEFLSPEARDLISGLLQKDPTKRLGSGGAEEIKAHPF 249

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250

>gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

 Score = 69.6 bits (171), Expect = 4e-14
 Identities = 50/184 (27%), Positives = 75/184 (40%), Gaps = 41/184 (22%)

Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQ------TRQYRAPEVILRAGYSFSVDM 86
           KP+  L   D + K+ DFG A    + ++ E+       T  YRAPEV+L++ Y+  VDM
Sbjct: 134 KPQNILVTSDGQVKIADFGLA----RIYSFEMALTSVVVTLWYRAPEVLLQSSYATPVDM 189

Query: 87  WSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGK-----MPRKIAIGGAQSKD 141
           WS  C   EL     LF   S      + D L  + ++IG       PR +++     + 
Sbjct: 190 WSVGCIFAELFRRRPLFRGTS------EADQLDKIFDVIGLPSEEEWPRNVSL----PRS 239

Query: 142 YFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ 201
            F  +          F              E       + L  +L F P KR +A + LQ
Sbjct: 240 SFPSYT---PRSFKSF------------VPEICEEG-LDLLKKMLTFNPHKRISAFEALQ 283

Query: 202 HPWL 205
           HP+ 
Sbjct: 284 HPYF 287

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287

>gnl|CDD|173750 cd07857, STKc_MPK1, Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

 Score = 69.7 bits (171), Expect = 5e-14
 Identities = 51/192 (26%), Positives = 87/192 (45%), Gaps = 29/192 (15%)

Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEE-------IQTRQYRAPEVILR-AGYSFSV 84
           KP   L   D   K+ DFG A   ++   E        + TR YRAPE++L    Y+ ++
Sbjct: 132 KPGNLLVNADCELKICDFGLARGFSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAI 191

Query: 85  DMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKI--AIGGAQSKDY 142
           D+WS  C   EL     +F    G+ +    D L  +++++G    +    IG  ++++Y
Sbjct: 192 DVWSVGCILAELLGRKPVF---KGKDYV---DQLNQILQVLGTPDEETLSRIGSPKAQNY 245

Query: 143 FDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQH 202
                 L  I +  F S+       +  +   A    + L  LL F P KR + ++ L+H
Sbjct: 246 IR---SLPNIPKKPFESI-------FPNANPLA---LDLLEKLLAFDPTKRISVEEALEH 292

Query: 203 PWLSLRNSTRDE 214
           P+L++ +   DE
Sbjct: 293 PYLAIWHDPDDE 304

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall construction, morphogenesis, and ion homeostasis. MPK1 is activated in response to cell wall stress including heat stimulation, osmotic shock, UV irradiation, and any agents that interfere with cell wall biogenesis such as chitin antagonists, caffeine, or zymolase. MPK1 is regulated by the MAP2Ks Mkk1/2, which are regulated by the MAP3K Bck1. Pmk1 is also activated by multiple stresses including elevated temperatures, hyper- or hypotonic stress, glucose deprivation, exposure to cell-wall damaging compounds, and oxidative stress. It is regulated by the MAP2K Pek1, which is regulated by the MAP3K Mkh1. Length = 332

>gnl|CDD|173749 cd07855, STKc_ERK5, Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

 Score = 68.5 bits (168), Expect = 1e-13
 Identities = 53/210 (25%), Positives = 89/210 (42%), Gaps = 32/210 (15%)

Query: 33  KPERCLDGIDMRCKVVDFGNA-CRANKQ------FAEEIQTRQYRAPEVILRAG-YSFSV 84
           KP   L   D   ++ DFG A   ++          E + TR YRAPE++L    Y+ ++
Sbjct: 134 KPSNLLVNEDCELRIGDFGMARGLSSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAI 193

Query: 85  DMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKI--AIGGAQSKDY 142
           DMWS  C   E+     LF  K+          L L++ ++G    ++   IG  + + Y
Sbjct: 194 DMWSVGCIFAEMLGRRQLFPGKNYVH------QLKLILSVLGSPSEEVLNRIGSDRVRKY 247

Query: 143 FDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQH 202
                +L R + + +  +       +  +  +A +    L  +L F PE+R T +Q LQH
Sbjct: 248 IQ---NLPRKQPVPWSKI-------FPKASPEALDL---LSQMLQFDPEERITVEQALQH 294

Query: 203 PWLSLRNSTRDETKNKSNVEKVDVGMSKLE 232
           P+L+  +   DE          D     +E
Sbjct: 295 PFLAQYHDPDDEPTCPP---PFDFDFEAIE 321

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the MAP2K MEK5, which in turn is regulated by the MAP3Ks MEKK2 and MEKK3. Activated ERK5 phosphorylates its targets including myocyte enhancer factor 2 (MEF2), Sap1a, c-Myc, and RSK. It plays a role in EGF-induced cell proliferation during the G1/S phase transition. Studies on knockout mice revealed that ERK5 is essential for cardiovascular development and plays an important role in angiogenesis. It is also critical for neural differentiation and survival. The ERK5 pathway has been implicated in the pathogenesis of many diseases including cancer, cardiac hypertrophy, and atherosclerosis. Length = 334

>gnl|CDD|173745 cd07848, STKc_CDKL5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

 Score = 68.1 bits (166), Expect = 1e-13
 Identities = 51/175 (29%), Positives = 81/175 (46%), Gaps = 20/175 (11%)

Query: 33  KPERCLDGIDMRCKVVDFGNACR----ANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWS 88
           KPE  L   +   K+ DFG A      +N  + E + TR YR+PE++L A Y  +VDMWS
Sbjct: 127 KPENLLISHNDVLKLCDFGFARNLSEGSNANYTEYVATRWYRSPELLLGAPYGKAVDMWS 186

Query: 89  FACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGD 148
             C   EL+ G  LF  +S      + D L  + +++G +P +      Q K ++     
Sbjct: 187 VGCILGELSDGQPLFPGES------EIDQLFTIQKVLGPLPAE------QMKLFYSN--- 231

Query: 149 LKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHP 203
             R   L+F +++     + R+    +    + +  LL   P  R   +QCL HP
Sbjct: 232 -PRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNHP 285

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes cause a phenotype similar to Rett syndrome (RTT), a progressive neurodevelopmental disorder. These pathogenic mutations are located in the N-terminal portion of the protein within the kinase domain. Length = 287

>gnl|CDD|143371 cd07866, STKc_BUR1, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

 Score = 67.7 bits (166), Expect = 2e-13
 Identities = 40/145 (27%), Positives = 57/145 (39%), Gaps = 29/145 (20%)

Query: 66  TRQYRAPEVILRA-GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMEL 124
           TR YR PE++L    Y+ +VD+W   C   E+ T   +   KS      D D L L+ +L
Sbjct: 189 TRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKS------DIDQLHLIFKL 242

Query: 125 IG-----KMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFA 179
            G       P   ++ G +    F  +    R    +F  L    +D             
Sbjct: 243 CGTPTEETWPGWRSLPGCEGVHSFTNY---PRTLEERFGKLGPEGLD------------- 286

Query: 180 EFLVPLLDFTPEKRPTAQQCLQHPW 204
             L  LL   P KR TA   L+HP+
Sbjct: 287 -LLSKLLSLDPYKRLTASDALEHPY 310

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. Length = 311

>gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

 Score = 67.2 bits (165), Expect = 3e-13
 Identities = 54/179 (30%), Positives = 73/179 (40%), Gaps = 26/179 (14%)

Query: 33  KPERCLDGIDMRCKVVDFGNACR---ANKQFAEEIQTRQYRAPEVILRAG-YSFSVDMWS 88
           KP   L   D   K+ DFG A      N++   ++ TR YRAPE++  A  Y   VDMWS
Sbjct: 129 KPNNLLIASDGVLKLADFGLARSFGSPNRKMTHQVVTRWYRAPELLFGARHYGVGVDMWS 188

Query: 89  FACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQS-KDYFDRHG 147
             C   EL           G     D D L  + E +G  P +    G  S  DY     
Sbjct: 189 VGCIFAELLLRVPFLP---GDS---DIDQLGKIFEALGT-PTEENWPGVTSLPDY----- 236

Query: 148 DLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLS 206
                  ++F       + K  F    + +  + L  LL   P KR TA+Q L+HP+ S
Sbjct: 237 -------VEFKPFPPTPL-KQIFP-AASDDALDLLQRLLTLNPNKRITARQALEHPYFS 286

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score = 67.1 bits (162), Expect = 5e-13
 Identities = 47/201 (23%), Positives = 67/201 (33%), Gaps = 48/201 (23%)

Query: 33  KPERCL-DGIDMRCKVVDFGNACRA---------NKQFAEEIQTRQYRAPEVIL---RAG 79
           KPE  L D      K++DFG A                +  + T  Y APEV+L    A 
Sbjct: 128 KPENILLDRDGRVVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAY 187

Query: 80  YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQS 139
            S S D+WS   T +EL TG   F         E E + +   +                
Sbjct: 188 ASSSSDIWSLGITLYELLTGLPPF---------EGEKNSSATSQT--------------- 223

Query: 140 KDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQC 199
                    LK I  L   SL   L       E  ++  ++ L  LL   P+ R ++   
Sbjct: 224 ---------LKIILELPTPSLASPL--SPSNPELISKAASDLLKKLLAKDPKNRLSSSSD 272

Query: 200 LQHPWLSLRNSTRDETKNKSN 220
           L H  L+       +  +   
Sbjct: 273 LSHDLLAHLKLKESDLSDLLK 293

Length = 384

>gnl|CDD|143361 cd07856, STKc_Sty1_Hog1, Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

 Score = 65.2 bits (159), Expect = 2e-12
 Identities = 54/188 (28%), Positives = 85/188 (45%), Gaps = 28/188 (14%)

Query: 33  KPERCLDGIDMRC--KVVDFGNACRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWSF 89
           KP   L  I+  C  K+ DFG A   + Q    + TR YRAPE++L    Y   VD+WS 
Sbjct: 135 KPSNIL--INENCDLKICDFGLARIQDPQMTGYVSTRYYRAPEIMLTWQKYDVEVDIWSA 192

Query: 90  ACTAFELATGDMLFAPKSGQGFCEDEDHL---ALMMELIGKMPRKIAIGGAQSKDYFDRH 146
            C   E+  G  LF  K         DH+   +++ +L+G  P  + I    S++     
Sbjct: 193 GCIFAEMLEGKPLFPGK---------DHVNQFSIITDLLGTPPDDV-INTICSENTLRFV 242

Query: 147 GDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLS 206
             L +   + F         K++ ++  A +  E    +L F P+KR +A + L HP+L+
Sbjct: 243 QSLPKREPVPFSE-------KFKNADPSAIDLLE---KMLVFDPQKRISAAEALAHPYLA 292

Query: 207 LRNSTRDE 214
             +   DE
Sbjct: 293 PYHDPTDE 300

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and UV radiation. Sty1 is regulated by the MAP2K Wis1, which is activated by the MAP3Ks Wis4 and Win1, which receive signals of the stress condition from membrane-spanning histidine kinases Mak1-3. Activated Sty1 stabilizes the Atf1 transcription factor and induces transcription of Atf1-dependent genes of the core environmetal stress response (CESR). Hog1 is the key element in the high osmolarity glycerol (HOG) pathway and is activated upon hyperosmotic stress. Activated Hog1 accumulates in the nucleus and regulates stress-induced transcription. The HOG pathway is mediated by two transmembrane osmosensors, Sln1 and Sho1. Length = 328

>gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

 Score = 63.7 bits (156), Expect = 4e-12
 Identities = 45/141 (31%), Positives = 59/141 (41%), Gaps = 20/141 (14%)

Query: 66  TRQYRAPEVILRA-GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDE-DHLALMME 123
           T  YR PE++L A  Y   VDMWS  C   EL  G  +F     QG    E + L  + E
Sbjct: 164 TLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIF-----QG--STELEQLEKIFE 216

Query: 124 LIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLV 183
           L G  P      G     +F+   +LK  +  K     R L +   F         + L 
Sbjct: 217 LCGS-PTDENWPGVSKLPWFE---NLKPKKPYK-----RRLREF--FKHLIDPSALDLLD 265

Query: 184 PLLDFTPEKRPTAQQCLQHPW 204
            LL   P+KR +A Q LQH +
Sbjct: 266 KLLTLDPKKRISADQALQHEY 286

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287

>gnl|CDD|173746 cd07850, STKc_JNK, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

 Score = 63.2 bits (154), Expect = 9e-12
 Identities = 51/178 (28%), Positives = 75/178 (42%), Gaps = 35/178 (19%)

Query: 46  KVVDFGNACRANKQF--AEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLF 103
           K++DFG A  A   F     + TR YRAPEVIL  GY  +VD+WS  C   E+  G +LF
Sbjct: 158 KILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLF 217

Query: 104 APKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIR-----RLKFW 158
                       DH       I +  + I   G  S ++  R     R       +   +
Sbjct: 218 PGT---------DH-------IDQWNKIIEQLGTPSDEFMSRLQPTVRNYVENRPKYAGY 261

Query: 159 SLDRLLVDKYRFSETD---------AREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSL 207
           S + L  D     +++         AR   + L  +L   PEKR +    LQHP++++
Sbjct: 262 SFEELFPDVLFPPDSESHNKLKASQAR---DLLSKMLVIDPEKRISVDDALQHPYINV 316

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3) that are alternatively spliced to produce at least 10 isoforms. JNKs are specifically activated by the MAPK kinases MKK4 and MKK7, which are in turn activated by upstream MAPK kinase kinases as a result of different stimuli including stresses such as ultraviolet (UV) irradiation, hyperosmolarity, heat shock, or cytokines. JNKs activate a large number of different substrates based on specific stimulus, cell type, and cellular condition, and may be implicated in seemingly contradictory functions. Length = 353

>gnl|CDD|173748 cd07853, STKc_NLK, Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

 Score = 63.2 bits (154), Expect = 1e-11
 Identities = 53/178 (29%), Positives = 78/178 (43%), Gaps = 21/178 (11%)

Query: 33  KPERCLDGIDMRCKVVDFGNA----CRANKQFAEEIQTRQYRAPEVILRAG-YSFSVDMW 87
           KP   L   +   K+ DFG A       +K   +E+ T+ YRAPE+++ +  Y+ +VD+W
Sbjct: 130 KPGNLLVNSNCVLKICDFGLARVEEPDESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIW 189

Query: 88  SFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHG 147
           S  C   EL    +LF  +S          L L+ +L+G  P   A+  A       R  
Sbjct: 190 SVGCIFAELLGRRILFQAQS------PIQQLDLITDLLGT-PSLEAMRSACEG---ARAH 239

Query: 148 DLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 205
            L+   +    SL  L    Y  S     E    L  +L F P+KR +A   L HP+L
Sbjct: 240 ILRGPHKPP--SLPVL----YTLSSQATHEAVHLLCRMLVFDPDKRISAADALAHPYL 291

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription factors from the TCF/LEF family, inhibiting their ability to activate the transcription of target genes. In prostate cancer cells, NLK is involved in regulating androgen receptor-mediated transcription and its expression is altered during cancer progression. Length = 372

>gnl|CDD|143363 cd07858, STKc_TEY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

 Score = 63.2 bits (154), Expect = 1e-11
 Identities = 50/169 (29%), Positives = 76/169 (44%), Gaps = 29/169 (17%)

Query: 46  KVVDFGNA---CRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWSFACTAFELATGDM 101
           K+ DFG A           E + TR YRAPE++L  + Y+ ++D+WS  C   EL     
Sbjct: 148 KICDFGLARTTSEKGDFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKP 207

Query: 102 LFAPKSGQGFCEDEDH---LALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKR-IRRLKF 157
           LF  K         D+   L L+ EL+G  P +  +G       F R+   +R IR L +
Sbjct: 208 LFPGK---------DYVHQLKLITELLGS-PSEEDLG-------FIRNEKARRYIRSLPY 250

Query: 158 WSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLS 206
               +     +  +   A +  E    +L F P KR T ++ L HP+L+
Sbjct: 251 TP-RQSFARLFPHANPLAIDLLE---KMLVFDPSKRITVEEALAHPYLA 295

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. This subfamily represents the TEY subtype and is further subdivided into three groups (A, B, and C). Group A is represented by AtMPK3, AtMPK6, Nicotiana tabacum BTF4 (NtNTF4), among others. They are mostly involved in environmental and hormonal responses. AtMPK3 and AtMPK6 are also key regulators for stomatal development and patterning. Group B is represented by AtMPK4, AtMPK13, and NtNTF6, among others. They may be involved in both cell division and environmental stress response. AtMPK4 also participates in regulating innate immunity. Group C is represented by AtMPK1, AtMPK2, NtNTF3, Oryza sativa MAPK4 (OsMAPK4), among others. They may also be involved in stress responses. AtMPK1 and AtMPK2 are activated following mechanical injury and in the presence of stress chemicals such as jasmonic acid, hydrogen peroxide and abscisic acid. OsMAPK4 is also called OsMSRMK3 for Multiple Stress-Responsive MAPK3. Length = 337

>gnl|CDD|143349 cd07844, STKc_PCTAIRE_like, Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

 Score = 62.8 bits (153), Expect = 1e-11
 Identities = 51/178 (28%), Positives = 79/178 (44%), Gaps = 21/178 (11%)

Query: 33  KPERCLDGIDMRCKVVDFGNACRA----NKQFAEEIQTRQYRAPEVILRA-GYSFSVDMW 87
           KP+  L       K+ DFG A RA    +K ++ E+ T  YR P+V+L +  YS S+DMW
Sbjct: 130 KPQNLLISERGELKLADFGLA-RAKSVPSKTYSNEVVTLWYRPPDVLLGSTEYSTSLDMW 188

Query: 88  SFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHG 147
              C  +E+ATG  LF      G  + ED L  +  ++G  P +    G  S   F  + 
Sbjct: 189 GVGCIFYEMATGRPLFP-----GSTDVEDQLHKIFRVLG-TPTEETWPGVSSNPEFKPY- 241

Query: 148 DLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 205
                    F+    L+    R          E  +  L + P+KR +A + ++HP+ 
Sbjct: 242 ------SFPFYPPRPLINHAPRLD--RIPHGEELALKFLQYEPKKRISAAEAMKHPYF 291

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the membrane-associated cyclin Y. PCTAIRE-like proteins show unusual expression patterns with high levels in post-mitotic tissues, suggesting that they may be involved in regulating post-mitotic cellular events. Length = 291

>gnl|CDD|143342 cd07837, STKc_CdkB_plant, Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

 Score = 61.4 bits (149), Expect = 3e-11
 Identities = 49/178 (27%), Positives = 75/178 (42%), Gaps = 27/178 (15%)

Query: 33  KPERCL-DGIDMRCKVVDFGNACRAN----KQFAEEIQTRQYRAPEVILRAG-YSFSVDM 86
           KP+  L D      K+ D G   RA     K +  EI T  YRAPEV+L +  YS  VD+
Sbjct: 137 KPQNLLVDKQKGLLKIADLGLG-RAFSIPVKSYTHEIVTLWYRAPEVLLGSTHYSTPVDI 195

Query: 87  WSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRH 146
           WS  C   E++    LF      G  E +  L +  +L+G    ++  G ++ +D+ +  
Sbjct: 196 WSVGCIFAEMSRKQPLFP-----GDSELQQLLHI-FKLLGTPTEQVWPGVSKLRDWHE-- 247

Query: 147 GDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPW 204
                      W    L        +    E  + L  +L + P KR +A+  L HP+
Sbjct: 248 --------FPQWKPQDL---SRAVPDLSP-EGLDLLQKMLRYDPAKRISAKAALTHPY 293

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developmental pathways, such as stomata and leaf development. CdkB has been shown to associate with both cyclin B, which controls G2/M transition, and cyclin D, which acts as a mediator in linking extracellular signals to the cell cycle. Length = 295

>gnl|CDD|143384 cd07879, STKc_p38delta_MAPK13, Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

 Score = 61.5 bits (149), Expect = 4e-11
 Identities = 50/179 (27%), Positives = 81/179 (45%), Gaps = 18/179 (10%)

Query: 42  DMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWSFACTAFELATGD 100
           D   K++DFG A  A+ +    + TR YRAPEVIL    Y+ +VD+WS  C   E+ TG 
Sbjct: 153 DCELKILDFGLARHADAEMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGK 212

Query: 101 MLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSL 160
            LF  K      +  D L  ++++ G +P    +   + K        L +  R  F +L
Sbjct: 213 TLFKGK------DYLDQLTQILKVTG-VPGPEFVQKLEDKAAKSYIKSLPKYPRKDFSTL 265

Query: 161 DRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNSTRDETKNKS 219
                    F +   +   + L  +L+   +KR TA + L+HP+        +ET+ + 
Sbjct: 266 ---------FPKASPQA-VDLLEKMLELDVDKRLTATEALEHPYFDSFRDADEETEQQP 314

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13, is found in skeletal muscle, heart, lung, testis, pancreas, and small intestine. It regulates microtubule function by phosphorylating Tau. It activates the c-jun promoter and plays a role in G2 cell cycle arrest. It also controls the degration of c-Myb, which is associated with myeloid leukemia and poor prognosis in colorectal cancer. p38delta is the main isoform involved in regulating the differentiation and apoptosis of keratinocytes. Length = 342

>gnl|CDD|143382 cd07877, STKc_p38alpha_MAPK14, Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

 Score = 61.6 bits (149), Expect = 4e-11
 Identities = 50/185 (27%), Positives = 83/185 (44%), Gaps = 22/185 (11%)

Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWSFAC 91
           KP       D   K++DFG A   + +    + TR YRAPE++L    Y+ +VD+WS  C
Sbjct: 147 KPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 206

Query: 92  TAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKI--AIGGAQSKDYFDRHGDL 149
              EL TG  LF P +     +  D L L++ L+G    ++   I    +++Y      L
Sbjct: 207 IMAELLTGRTLF-PGT-----DHIDQLKLILRLVGTPGAELLKKISSESARNYIQ---SL 257

Query: 150 KRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRN 209
            ++ ++ F        + +  +   A    + L  +L    +KR TA Q L H + +  +
Sbjct: 258 TQMPKMNF-------ANVFIGANPLA---VDLLEKMLVLDSDKRITAAQALAHAYFAQYH 307

Query: 210 STRDE 214
              DE
Sbjct: 308 DPDDE 312

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14, is expressed in most tissues and is the major isoform involved in the immune and inflammatory response. It is the central p38 MAPK involved in myogenesis. It plays a role in regulating cell cycle check-point transition and promoting cell differentiation. p38alpha also regulates cell proliferation and death through crosstalk with the JNK pathway. Its substrates include MAPK activated protein kinase 2 (MK2), MK5, and the transcription factors ATF2 and Mitf. Length = 345

>gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

 Score = 61.1 bits (149), Expect = 4e-11
 Identities = 48/182 (26%), Positives = 75/182 (41%), Gaps = 31/182 (17%)

Query: 33  KPERCLDGIDMRCKVVDFG----NACRANKQFAEEIQTRQYRAPEVILRA-GYSFSVDMW 87
           KP   L   D   K+ DFG     +    + ++ ++ TR YRAPE++  A  Y   VD+W
Sbjct: 126 KPANLLISADGVLKIADFGLARLFSEEEPRLYSHQVATRWYRAPELLYGARKYDPGVDLW 185

Query: 88  SFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDY----F 143
           +  C   EL  G  LF  ++      D + LA++   +G    +   G     DY    F
Sbjct: 186 AVGCIFAELLNGSPLFPGEN------DIEQLAIVFRTLGTPNEETWPGLTSLPDYNKITF 239

Query: 144 DRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHP 203
                 K I       L+ +      F +       + L  LL + P KR +A + L+HP
Sbjct: 240 PES---KPIP------LEEI------FPDASPEAL-DLLKGLLVYDPSKRLSAAEALRHP 283

Query: 204 WL 205
           + 
Sbjct: 284 YF 285

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score = 59.9 bits (146), Expect = 4e-11
 Identities = 24/69 (34%), Positives = 32/69 (46%), Gaps = 5/69 (7%)

Query: 33  KPERCL-DGIDMRCKVVDFGNACR---ANKQFAEEIQTRQYRAPEVILRAG-YSFSVDMW 87
           KPE  L D  + + K+ DFG +             + T  Y APEV+L  G YS   D+W
Sbjct: 119 KPENILLDSDNGKVKLADFGLSKLLTSDKSLLKTIVGTPAYMAPEVLLGKGYYSEKSDIW 178

Query: 88  SFACTAFEL 96
           S     +EL
Sbjct: 179 SLGVILYEL 187

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|143383 cd07878, STKc_p38beta_MAPK11, Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

 Score = 60.8 bits (147), Expect = 6e-11
 Identities = 53/190 (27%), Positives = 82/190 (43%), Gaps = 32/190 (16%)

Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWSFAC 91
           KP       D   +++DFG A +A+ +    + TR YRAPE++L    Y+ +VD+WS  C
Sbjct: 145 KPSNVAVNEDCELRILDFGLARQADDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 204

Query: 92  TAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKI--AIGGAQSKDYFDR---- 145
              EL  G  LF    G  +    D L  +ME++G    ++   I    ++ Y       
Sbjct: 205 IMAELLKGKALF---PGNDYI---DQLKRIMEVVGTPSPEVLKKISSEHARKYIQSLPHM 258

Query: 146 -HGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPW 204
              DLK+I    F   + L +D               L  +L    +KR +A + L HP+
Sbjct: 259 PQQDLKKI----FRGANPLAID--------------LLEKMLVLDSDKRISASEALAHPY 300

Query: 205 LSLRNSTRDE 214
            S  +   DE
Sbjct: 301 FSQYHDPEDE 310

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is widely expressed in tissues and shows more similarity with p38alpha than with the other isoforms. Both are sensitive to pyridinylimidazoles and share some common substrates such as MAPK activated protein kinase 2 (MK2) and the transcription factors ATF2, c-Fos and, ELK-1. p38beta is involved in regulating the activation of the cyclooxygenase-2 promoter and the expression of TGFbeta-induced alpha-smooth muscle cell actin. Length = 343

>gnl|CDD|143381 cd07876, STKc_JNK2, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

 Score = 59.7 bits (144), Expect = 2e-10
 Identities = 55/187 (29%), Positives = 84/187 (44%), Gaps = 28/187 (14%)

Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQF--AEEIQTRQYRAPEVILRAGYSFSVDMWSFA 90
           KP   +   D   K++DFG A  A   F     + TR YRAPEVIL  GY  +VD+WS  
Sbjct: 150 KPSNIVVKSDCTLKILDFGLARTACTNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 209

Query: 91  CTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLK 150
           C   EL  G ++F     QG     DH       I +  + I   G  S ++ +R     
Sbjct: 210 CIMGELVKGSVIF-----QG----TDH-------IDQWNKVIEQLGTPSAEFMNRLQPTV 253

Query: 151 R---IRRLKF--WSLDRLLVDKYRFSETD-----AREFAEFLVPLLDFTPEKRPTAQQCL 200
           R     R ++   S + L  D    SE++       +  + L  +L   P+KR +  + L
Sbjct: 254 RNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEAL 313

Query: 201 QHPWLSL 207
           +HP++++
Sbjct: 314 RHPYITV 320

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK2 is specifically translocated to the mitochondria during dopaminergic cell death. Specific substrates include the microtubule-associated proteins DCX and Tau, as well as TIF-IA which is involved in ribosomal RNA synthesis regulation. Mice deficient in Jnk2 show protection against arthritis, type 1 diabetes, atherosclerosis, abdominal aortic aneurysm, cardiac cell death, TNF-induced liver damage, and tumor growth, indicating that JNK2 may play roles in the pathogenesis of these diseases. Length = 359

>gnl|CDD|143379 cd07874, STKc_JNK3, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

 Score = 58.9 bits (142), Expect = 3e-10
 Identities = 49/178 (27%), Positives = 79/178 (44%), Gaps = 10/178 (5%)

Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQF--AEEIQTRQYRAPEVILRAGYSFSVDMWSFA 90
           KP   +   D   K++DFG A  A   F     + TR YRAPEVIL  GY  +VD+WS  
Sbjct: 146 KPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 205

Query: 91  CTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGK-MPRKIAIGGAQSKDYFDRHGDL 149
           C   E+    +LF    G+ +    D    ++E +G   P  +       ++Y +     
Sbjct: 206 CIMGEMVRHKILF---PGRDYI---DQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKY 259

Query: 150 KRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSL 207
             +   K +  D L       ++  A +  + L  +L   P KR +  + LQHP++++
Sbjct: 260 AGLTFPKLFP-DSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQHPYINV 316

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, stroke, sciatic axotomy neural death, and neuronal death due to NGF deprivation, oxidative stress, or exposure to beta-amyloid peptide. This suggests that JNK3 may play roles in the pathogenesis of these diseases. Length = 355

>gnl|CDD|143380 cd07875, STKc_JNK1, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

 Score = 58.5 bits (141), Expect = 4e-10
 Identities = 50/187 (26%), Positives = 83/187 (44%), Gaps = 28/187 (14%)

Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQF--AEEIQTRQYRAPEVILRAGYSFSVDMWSFA 90
           KP   +   D   K++DFG A  A   F     + TR YRAPEVIL  GY  +VD+WS  
Sbjct: 153 KPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 212

Query: 91  CTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLK 150
           C   E+  G +LF            DH+    ++I ++       G    ++  +     
Sbjct: 213 CIMGEMIKGGVLFPGT---------DHIDQWNKVIEQL-------GTPCPEFMKKLQPTV 256

Query: 151 RI---RRLKF--WSLDRLLVDKYRFSETD-----AREFAEFLVPLLDFTPEKRPTAQQCL 200
           R     R K+  +S ++L  D    ++++     A +  + L  +L     KR +  + L
Sbjct: 257 RTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEAL 316

Query: 201 QHPWLSL 207
           QHP++++
Sbjct: 317 QHPYINV 323

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK1 specifically binds with JAMP (JNK1-associated membrane protein), which regulates the duration of JNK1 activity in response to stimuli. Specific JNK1 substrates include Itch and SG10, which are implicated in Th2 responses and airway inflammation, and microtubule dynamics and axodendritic length, respectively. Mice deficient in Jnk1 are protected against arthritis, obesity, type 2 diabetes, cardiac cell death, and non-alcoholic liver disease, suggesting that JNK1 may play roles in the pathogenesis of these diseases. Length = 364

>gnl|CDD|143364 cd07859, STKc_TDY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

 Score = 58.3 bits (141), Expect = 4e-10
 Identities = 47/182 (25%), Positives = 79/182 (43%), Gaps = 29/182 (15%)

Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQ------FAEEIQTRQYRAPEVI--LRAGYSFSV 84
           KP+  L   D + K+ DFG A  A         + + + TR YRAPE+     + Y+ ++
Sbjct: 130 KPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAI 189

Query: 85  DMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKI--AIGGAQSKDY 142
           D+WS  C   E+ TG  LF  K+          L L+ +L+G    +    +   +++ Y
Sbjct: 190 DIWSIGCIFAEVLTGKPLFPGKNVV------HQLDLITDLLGTPSPETISRVRNEKARRY 243

Query: 143 FDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQH 202
                 +++ + + F           +F   D       L  LL F P+ RPTA++ L  
Sbjct: 244 L---SSMRKKQPVPFSQ---------KFPNADPLAL-RLLERLLAFDPKDRPTAEEALAD 290

Query: 203 PW 204
           P+
Sbjct: 291 PY 292

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. Arabidopsis thaliana contains more TEY-type MAPKs than TDY-type, whereas the reverse is true for Oryza sativa. This subfamily represents the TDY subtype and is composed of Group D plant MAPKs including Arabidopsis thaliana MPK18 (AtMPK18), Oryza sativa Blast- and Wound-induced MAPK1 (OsBWMK1), OsWJUMK1 (Wound- and JA-Uninducible MAPK1), Zea mays MPK6, and the Medicago sativa TDY1 gene product. OsBWMK1 enhances resistance to pathogenic infections. It mediates stress-activated defense responses by activating a transcription factor that affects the expression of stress-related genes. AtMPK18 is involved in microtubule-related functions. Length = 338

>gnl|CDD|143368 cd07863, STKc_CDK4, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

 Score = 56.9 bits (137), Expect = 1e-09
 Identities = 55/175 (31%), Positives = 77/175 (44%), Gaps = 23/175 (13%)

Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEE--IQTRQYRAPEVILRAGYSFSVDMWSFA 90
           KPE  L     + K+ DFG A   + Q A    + T  YRAPEV+L++ Y+  VDMWS  
Sbjct: 135 KPENILVTSGGQVKLADFGLARIYSCQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVG 194

Query: 91  CTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLK 150
           C   E+     LF   S      + D L  + +LIG +P          +D + R   L 
Sbjct: 195 CIFAEMFRRKPLFCGNS------EADQLGKIFDLIG-LP---------PEDDWPRDVTLP 238

Query: 151 RIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 205
              R  F       V      E +    A+ L+ +L F P KR +A + LQHP+ 
Sbjct: 239 ---RGAFSPRGPRPVQSV-VPEIEESG-AQLLLEMLTFNPHKRISAFRALQHPFF 288

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the nucleus. CDK4 also shows kinase activity towards Smad3, a signal transducer of transforming growth factor (TGF)-beta signaling which modulates transcription and plays a role in cell proliferation and apoptosis. CDK4 is inhibited by the p21 inhibitor and is specifically mutated in human melanoma. Length = 288

>gnl|CDD|173741 cd07843, STKc_CDC2L1, Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

 Score = 56.8 bits (138), Expect = 1e-09
 Identities = 52/168 (30%), Positives = 75/168 (44%), Gaps = 30/168 (17%)

Query: 46  KVVDFGNACRAN---KQFAEEIQTRQYRAPEVILRAG-YSFSVDMWSFACTAFELATGDM 101
           K+ DFG A       K + + + T  YRAPE++L A  YS ++DMWS  C   EL T   
Sbjct: 146 KICDFGLAREYGSPLKPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKP 205

Query: 102 LFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIG-----GAQSKDYFDRHGDLKRIRRLK 156
           LF  KS      + D L  + +L+G    KI  G     GA+ K  F ++   +  ++  
Sbjct: 206 LFPGKS------EIDQLNKIFKLLGTPTEKIWPGFSELPGAKKKT-FTKYPYNQLRKKFP 258

Query: 157 FWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPW 204
             SL     D               L  LL + P KR +A+  L+HP+
Sbjct: 259 ALSLSDNGFD--------------LLNRLLTYDPAKRISAEDALKHPY 292

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the major isoform, associates with cyclin L and is expressed throughout the cell cycle. It is involved in RNA processing and the regulation of transcription. CDK11(p58) associates with cyclin D3 and is expressed during the G2/M phase of the cell cycle. It plays roles in spindle morphogenesis, centrosome maturation, sister chromatid cohesion, and the completion of mitosis. CDK11(p46) is formed from the larger isoforms by caspases during TNFalpha- and Fas-induced apoptosis. It functions as a downstream effector kinase in apoptotic signaling pathways and interacts with eukaryotic initiation factor 3f (eIF3f), p21-activated kinase (PAK1), and Ran-binding protein (RanBPM). Length = 293

>gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

 Score = 56.6 bits (137), Expect = 1e-09
 Identities = 43/173 (24%), Positives = 61/173 (35%), Gaps = 60/173 (34%)

Query: 46  KVVDFGNACRANKQ---FAEEIQ----TRQYRAPEVILRA---GYSFSVDMWSFACTAFE 95
           K+ DFG A +         EE+Q    T  Y APEVI      G+  + D+WS  C   E
Sbjct: 139 KLGDFGCAVKLKNNTTTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLE 198

Query: 96  LATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKI---AIGGAQSKDYFDRHGDLKRI 152
           +ATG     P S       ++   +M  +       I        + KD+ DR       
Sbjct: 199 MATGK---RPWSEL-----DNEFQIMFHVGAGHKPPIPDSLQLSPEGKDFLDR------- 243

Query: 153 RRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 205
                                            L+  P+KRPTA + LQHP++
Sbjct: 244 --------------------------------CLESDPKKRPTASELLQHPFV 264

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264

>gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

 Score = 56.1 bits (136), Expect = 2e-09
 Identities = 36/110 (32%), Positives = 49/110 (44%), Gaps = 26/110 (23%)

Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQ----------YRAPEVILRAGYSF 82
           KPE  L   +   K+VDFG        FA+++++ Q          Y APE+IL  GY F
Sbjct: 120 KPENLLLDSNGYVKLVDFG--------FAKKLKSGQKTWTFCGTPEYVAPEIILNKGYDF 171

Query: 83  SVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKI 132
           SVD WS     +EL TG           F ED++    +   I K   K+
Sbjct: 172 SVDYWSLGILLYELLTG--------RPPFGEDDEDPMEIYNDILKGNGKL 213

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262

>gnl|CDD|143378 cd07873, STKc_PCTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

 Score = 56.2 bits (135), Expect = 2e-09
 Identities = 53/178 (29%), Positives = 81/178 (45%), Gaps = 24/178 (13%)

Query: 33  KPERCLDGIDMRCKVVDFGNACRA----NKQFAEEIQTRQYRAPEVIL-RAGYSFSVDMW 87
           KP+  L       K+ DFG A RA     K ++ E+ T  YR P+++L    YS  +DMW
Sbjct: 131 KPQNLLINERGELKLADFGLA-RAKSIPTKTYSNEVVTLWYRPPDILLGSTDYSTQIDMW 189

Query: 88  SFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHG 147
              C  +E++TG  LF P S       E+ L  +  ++G  P +    G  S + F  + 
Sbjct: 190 GVGCIFYEMSTGRPLF-PGSTV-----EEQLHFIFRILG-TPTEETWPGILSNEEFKSYN 242

Query: 148 DLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 205
             K       +  D L     R  ++D    AE L  LL F   KR +A++ ++HP+ 
Sbjct: 243 YPK-------YRADCLHNHAPRL-DSDG---AELLSKLLQFEGRKRISAEEAMKHPYF 289

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may play a role in regulating neurite outgrowth. It can also associate with Trap (Tudor repeat associator with PCTAIRE-2), a physiological partner of PCTAIRE-2; with p11, a small dimeric protein with similarity to S100; and with 14-3-3 proteins, mediators of phosphorylation-dependent interactions in many different proteins. Length = 301

>gnl|CDD|143359 cd07854, STKc_MAPK4_6, Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

 Score = 56.3 bits (136), Expect = 2e-09
 Identities = 50/198 (25%), Positives = 76/198 (38%), Gaps = 57/198 (28%)

Query: 42  DMRCKVVDFGNACRANKQF------AEEIQTRQYRAPEVILRA-GYSFSVDMWSFACTAF 94
           D+  K+ DFG A   +  +      +E + T+ YR+P ++L    Y+ ++DMW+  C   
Sbjct: 151 DLVLKIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFA 210

Query: 95  ELATGDMLFAPKSGQGFCEDEDH-LALMM---------------ELIGKMPRKIAIGGAQ 138
           E+ TG  LFA            H L  M                EL+  +P  +   G +
Sbjct: 211 EMLTGKPLFA----------GAHELEQMQLILESVPVVREEDRNELLNVIPSFVRNDGGE 260

Query: 139 SKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQ 198
                         RR     L  LL            E  +FL  +L F P  R TA++
Sbjct: 261 -------------PRR----PLRDLL-------PGVNPEALDFLEQILTFNPMDRLTAEE 296

Query: 199 CLQHPWLSLRNSTRDETK 216
            L HP++S  +   DE  
Sbjct: 297 ALMHPYMSCYSCPFDEPV 314

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progression in certain conditions. It may also play a role in glucose-induced insulin secretion. MAPK6 and MAPK4 cooperate to regulate the activity of MAPK-activated protein kinase 5 (MK5), leading to its relocation to the cytoplasm and exclusion from the nucleus. The MAPK6/MK5 and MAPK4/MK5 pathways may play critical roles in embryonic and post-natal development. Length = 342

>gnl|CDD|143377 cd07872, STKc_PCTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

 Score = 56.2 bits (135), Expect = 2e-09
 Identities = 54/178 (30%), Positives = 79/178 (44%), Gaps = 24/178 (13%)

Query: 33  KPERCLDGIDMRCKVVDFGNACRA----NKQFAEEIQTRQYRAPEVILRAG-YSFSVDMW 87
           KP+  L       K+ DFG A RA     K ++ E+ T  YR P+V+L +  YS  +DMW
Sbjct: 131 KPQNLLINERGELKLADFGLA-RAKSVPTKTYSNEVVTLWYRPPDVLLGSSEYSTQIDMW 189

Query: 88  SFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHG 147
              C  FE+A+G  LF P S       ED L L+  L+G  P +    G  S D F  + 
Sbjct: 190 GVGCIFFEMASGRPLF-PGSTV-----EDELHLIFRLLG-TPTEETWPGISSNDEFKNYN 242

Query: 148 DLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 205
             K       +    L+    R       E  E L   L +  +KR +A++ ++H + 
Sbjct: 243 FPK-------YKPQPLINHAPRLDT----EGIELLTKFLQYESKKRISAEEAMKHAYF 289

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play a role in regulating mitochondrial function in neurons. Length = 309

>gnl|CDD|173742 cd07845, STKc_CDK10, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

 Score = 55.8 bits (135), Expect = 3e-09
 Identities = 46/166 (27%), Positives = 72/166 (43%), Gaps = 28/166 (16%)

Query: 46  KVVDFGNACRAN---KQFAEEIQTRQYRAPEVILRA-GYSFSVDMWSFACTAFELATGDM 101
           K+ DFG A       K    ++ T  YRAPE++L    Y+ ++DMW+  C   EL     
Sbjct: 148 KIADFGLARTYGLPAKPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKP 207

Query: 102 LFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLD 161
           L   KS      + + L L+++L+G     I  G       F     + +   L     +
Sbjct: 208 LLPGKS------EIEQLDLIIQLLGTPNESIWPG-------FSDLPLVGKF-TLPKQPYN 253

Query: 162 RLLVDKYRF---SETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPW 204
            L   K++F   SE   R     L  LL + P+KR TA++ L+  +
Sbjct: 254 NL---KHKFPWLSEAGLR----LLNFLLMYDPKKRATAEEALESSY 292

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. Length = 309

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score = 55.7 bits (135), Expect = 3e-09
 Identities = 46/180 (25%), Positives = 63/180 (35%), Gaps = 62/180 (34%)

Query: 44  RCKVVDFGNACRANKQFAEEIQTRQ-------YRAPEVILRAGYSFSVDMWSFACTAFEL 96
             K+ DFG A     Q  +E   R        + APEVI R  Y   VD+WS      E+
Sbjct: 154 SVKLADFGFAA----QLTKEKSKRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEM 209

Query: 97  ATGD---MLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIR 153
           A G+   +   P               +  L       I   G               I 
Sbjct: 210 AEGEPPYLREPP---------------LRAL-----FLITTKG---------------IP 234

Query: 154 RLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNSTRD 213
            LK         +  ++S     EF +FL   L   PEKRP+A++ LQHP+L       +
Sbjct: 235 PLK---------NPEKWSP----EFKDFLNKCLVKDPEKRPSAEELLQHPFLKKACPKEE 281

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

 Score = 55.5 bits (134), Expect = 3e-09
 Identities = 42/163 (25%), Positives = 67/163 (41%), Gaps = 49/163 (30%)

Query: 46  KVVDFGNACRANKQ-FAEEIQ-TRQYRAPEVILRAG-YSFSVDMWSFACTAFELATGDML 102
           K+ DFG A +  +  FA+  + +  + APEVI + G Y  + D+WS  CT  E+ATG   
Sbjct: 142 KLADFGMAKQVVEFSFAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATG--- 198

Query: 103 FAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDR 162
             P   Q            +E +  + +   IG         R  +L  I          
Sbjct: 199 -KPPWSQ------------LEGVAAVFK---IG---------RSKELPPI---------- 223

Query: 163 LLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 205
                    +  + E  +F++  L   P  RPTA + L+HP++
Sbjct: 224 --------PDHLSDEAKDFILKCLQRDPSLRPTAAELLEHPFV 258

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score = 55.3 bits (134), Expect = 3e-09
 Identities = 46/166 (27%), Positives = 61/166 (36%), Gaps = 54/166 (32%)

Query: 45  CKVVDFGNACRAN---KQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDM 101
            K+ DFG A + N   K  A  + T  + APEVI  +G S + D+WS  CT  EL T   
Sbjct: 138 VKLADFGVATKLNDVSKDDASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLT--- 194

Query: 102 LFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDR--HGDLKRIRRLKFWS 159
                                   G  P            Y+D      L RI +     
Sbjct: 195 ------------------------GNPP------------YYDLNPMAALFRIVQD---- 214

Query: 160 LDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 205
                 D     E  + E  +FL+      P  RPTA+Q L+HPW+
Sbjct: 215 ------DHPPLPEGISPELKDFLMQCFQKDPNLRPTAKQLLKHPWI 254

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

 Score = 55.4 bits (134), Expect = 3e-09
 Identities = 47/179 (26%), Positives = 65/179 (36%), Gaps = 50/179 (27%)

Query: 33  KPERCLDGIDMRCKVVDFG-------NACRANKQFAEEIQTRQYRAPEVI-LRAGYSFSV 84
           K    L G D   K+ DFG          R  K     + T  + APEV+    GY F  
Sbjct: 129 KAGNILLGEDGSVKIADFGVSASLADGGDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKA 188

Query: 85  DMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFD 144
           D+WSF  TA ELATG    AP S          + ++M  +   P  +  G         
Sbjct: 189 DIWSFGITAIELATGA---APYS------KYPPMKVLMLTLQNDPPSLETG--------- 230

Query: 145 RHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHP 203
                                D  ++S    + F + +   L   P KRPTA++ L+H 
Sbjct: 231 --------------------ADYKKYS----KSFRKMISLCLQKDPSKRPTAEELLKHK 265

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267

>gnl|CDD|173738 cd07835, STKc_CDK1_like, Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

 Score = 55.0 bits (133), Expect = 5e-09
 Identities = 52/184 (28%), Positives = 77/184 (41%), Gaps = 37/184 (20%)

Query: 33  KPERCLDGIDMRCKVVDFGNACRAN----KQFAEEIQTRQYRAPEVILRAG-YSFSVDMW 87
           KP+  L   +   K+ DFG A RA     + +  E+ T  YRAPE++L +  YS  VD+W
Sbjct: 126 KPQNLLIDREGALKLADFGLA-RAFGVPVRTYTHEVVTLWYRAPEILLGSRQYSTPVDIW 184

Query: 88  SFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQS----KDYF 143
           S  C   E+     LF   S      + D L  +   +G  P +    G  S    K  F
Sbjct: 185 SIGCIFAEMVNRRPLFPGDS------EIDQLFRIFRTLG-TPDEDVWPGVTSLPDYKPTF 237

Query: 144 DR--HGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ 201
            +    DL ++      +LD   +D               L  +L + P KR +A+  LQ
Sbjct: 238 PKWARQDLSKV----VPNLDEDGLD--------------LLSKMLVYDPAKRISAKAALQ 279

Query: 202 HPWL 205
           HP+ 
Sbjct: 280 HPYF 283

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression while the CDK1/cyclin B complex is critical for G2 to M phase transition. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. Studies in knockout mice revealed that CDK1 can compensate for the loss of the cdk2 gene as it can also bind cyclin E and drive G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 283

>gnl|CDD|173751 cd07860, STKc_CDK2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

 Score = 54.8 bits (132), Expect = 6e-09
 Identities = 50/177 (28%), Positives = 74/177 (41%), Gaps = 25/177 (14%)

Query: 33  KPERCLDGIDMRCKVVDFGNACRA----NKQFAEEIQTRQYRAPEVILRAG-YSFSVDMW 87
           KP+  L   +   K+ DFG A RA     + +  E+ T  YRAPE++L    YS +VD+W
Sbjct: 127 KPQNLLINTEGAIKLADFGLA-RAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIW 185

Query: 88  SFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHG 147
           S  C   E+ T   LF   S      + D L  +   +G     +  G     DY     
Sbjct: 186 SLGCIFAEMVTRRALFPGDS------EIDQLFRIFRTLGTPDEVVWPGVTSLPDY---KP 236

Query: 148 DLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPW 204
              +  R  F  +   L       + D R   + L  +L + P KR +A+  L HP+
Sbjct: 237 SFPKWARQDFSKVVPPL-------DEDGR---DLLSQMLHYDPNKRISAKAALAHPF 283

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 284

>gnl|CDD|173740 cd07842, STKc_CDK8_like, Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

 Score = 54.6 bits (132), Expect = 7e-09
 Identities = 45/179 (25%), Positives = 75/179 (41%), Gaps = 31/179 (17%)

Query: 44  RCKVVDFGNACRAN---KQFAEE---IQTRQYRAPEVILRAG-YSFSVDMWSFACTAFEL 96
             K+ D G A   N   K  A+    + T  YRAPE++L A  Y+ ++D+W+  C   EL
Sbjct: 150 VVKIGDLGLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAEL 209

Query: 97  ATGDMLFAPKSGQGFCEDE----------DHLALMMELIGKMPRKIAIGGAQSKDYFDRH 146
            T + +F          +           D L  + E++G    K        K   +  
Sbjct: 210 LTLEPIF-------KGREAKIKKSNPFQRDQLERIFEVLGTPTEKDWPD---IKKMPEYD 259

Query: 147 GDLKRIRRLKFWSLDRLLVDKY-RFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPW 204
             +K  +   + S    L     +  + D++ F   L  LL++ P KR TA++ L+HP+
Sbjct: 260 TLMKDFKTKTYPS--NSLAKWMEKHKKPDSQGFD-LLRKLLEYDPTKRITAEEALEHPY 315

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDC2L6 also associates with Mediator in complexes lacking CDK8. In VP16-dependent transcriptional activation, CDK8 and CDC2L6 exerts opposing effects by positive and negative regulation, respectively, in similar conditions. Length = 316

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score = 54.2 bits (131), Expect = 7e-09
 Identities = 43/164 (26%), Positives = 63/164 (38%), Gaps = 48/164 (29%)

Query: 45  CKVVDFGNACRANKQFAEE---IQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDM 101
            K+ DFG + +     A+    I T  + APEVI   GY+   D+WS   TA E+A G  
Sbjct: 138 AKLADFGVSGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEG-- 195

Query: 102 LFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLD 161
              P S       + H    + +I   P         +            +   + WS  
Sbjct: 196 -KPPYS-------DIHPMRAIFMIPNKP-------PPT------------LSDPEKWS-- 226

Query: 162 RLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 205
                          EF +F+   L   PE+RP+A Q LQHP++
Sbjct: 227 --------------PEFNDFVKKCLVKDPEERPSAIQLLQHPFI 256

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|143344 cd07839, STKc_CDK5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

 Score = 53.2 bits (128), Expect = 2e-08
 Identities = 49/177 (27%), Positives = 74/177 (41%), Gaps = 24/177 (13%)

Query: 33  KPERCLDGIDMRCKVVDFGNACRAN----KQFAEEIQTRQYRAPEVILRA-GYSFSVDMW 87
           KP+  L   +   K+ DFG A RA     + ++ E+ T  YR P+V+  A  YS S+DMW
Sbjct: 126 KPQNLLINKNGELKLADFGLA-RAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMW 184

Query: 88  SFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHG 147
           S  C   ELA       P +     + +D L  +  L+G    +   G ++  DY     
Sbjct: 185 SAGCIFAELANAGRPLFPGN-----DVDDQLKRIFRLLGTPTEESWPGVSKLPDY----K 235

Query: 148 DLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPW 204
                           +V K   +  D       L  LL   P +R +A++ LQHP+
Sbjct: 236 PYPMYPATTSLV---NVVPKLNSTGRD------LLQNLLVCNPVQRISAEEALQHPY 283

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also important in synaptic plasticity and learning. CDK5 also participates in protecting against cell death and promoting angiogenesis. Impaired CDK5 activity is implicated in Alzheimer's disease, amyotrophic lateral sclerosis, Parkinson's disease, Huntington's disease and acute neuronal injury. Length = 284

>gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

 Score = 53.0 bits (128), Expect = 2e-08
 Identities = 31/135 (22%), Positives = 54/135 (40%), Gaps = 46/135 (34%)

Query: 71  APEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPR 130
           APEVI ++GY    D+WS   TA ELA G+    P S      D   + ++  +    P 
Sbjct: 166 APEVIKQSGYDEKADIWSLGITAIELAKGE---PPLS------DLHPMRVLFLIPKNNPP 216

Query: 131 KIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTP 190
            +           + +                       FS    + F +F+   L+  P
Sbjct: 217 SL-----------EGNK----------------------FS----KPFKDFVSLCLNKDP 239

Query: 191 EKRPTAQQCLQHPWL 205
           ++RP+A++ L+H ++
Sbjct: 240 KERPSAKELLKHKFI 254

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274

>gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

 Score = 52.4 bits (126), Expect = 3e-08
 Identities = 47/186 (25%), Positives = 77/186 (41%), Gaps = 41/186 (22%)

Query: 33  KPERCLDGIDMRCKVVDFGNA---CRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWS 88
           KPE  L       K+ DFG A       + + + + TR YRAPE+++    Y  +VD+W+
Sbjct: 127 KPENILVSQSGVVKLCDFGFARTLAAPGEVYTDYVATRWYRAPELLVGDTKYGRAVDIWA 186

Query: 89  FACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFD---- 144
             C   E+ TG+ LF   S      D D L  +++ +G +  +        ++ F     
Sbjct: 187 VGCLVTEMLTGEPLFPGDS------DIDQLYHIIKCLGNLIPR-------HQEIFQKNPL 233

Query: 145 ----RHGDLKRIRRL--KFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQ 198
               R  ++K I  L  +F  L  L++D                   L   P+ RP++ Q
Sbjct: 234 FAGMRLPEVKEIEPLEKRFPKLSGLVLD--------------LAKQCLRIDPDDRPSSSQ 279

Query: 199 CLQHPW 204
            L H +
Sbjct: 280 LLHHEF 285

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286

>gnl|CDD|173744 cd07847, STKc_CDKL1_4, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

 Score = 52.4 bits (126), Expect = 4e-08
 Identities = 48/177 (27%), Positives = 76/177 (42%), Gaps = 23/177 (12%)

Query: 33  KPERCLDGIDMRCKVVDFGNA---CRANKQFAEEIQTRQYRAPEVIL-RAGYSFSVDMWS 88
           KPE  L     + K+ DFG A         + + + TR YRAPE+++    Y   VD+W+
Sbjct: 127 KPENILITKQGQIKLCDFGFARILTGPGDDYTDYVATRWYRAPELLVGDTQYGPPVDVWA 186

Query: 89  FACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKM-PRKIAIGGAQSKDYFDRHG 147
             C   EL TG  L+  KS      D D L L+ + +G + PR   I    +  +F   G
Sbjct: 187 IGCVFAELLTGQPLWPGKS------DVDQLYLIRKTLGDLIPRHQQI--FSTNQFF--KG 236

Query: 148 DLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPW 204
                  L     +     + +F    +   + FL   L   P +R + ++ L+HP+
Sbjct: 237 -------LSIPEPETREPLESKFPNISSPALS-FLKGCLQMDPTERLSCEELLEHPY 285

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The function of CDKL4 is unknown. Length = 286

>gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

 Score = 51.9 bits (125), Expect = 4e-08
 Identities = 26/78 (33%), Positives = 34/78 (43%), Gaps = 11/78 (14%)

Query: 33  KPERCLDGIDMRCKVVDFG-----------NACRANKQFAEEIQTRQYRAPEVILRAGYS 81
           KP+  L   +   K+ DFG           N     K+    + T  Y APEVIL  G+S
Sbjct: 120 KPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEKEDKRIVGTPDYIAPEVILGQGHS 179

Query: 82  FSVDMWSFACTAFELATG 99
            +VD WS  C  +E   G
Sbjct: 180 KTVDWWSLGCILYEFLVG 197

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265

>gnl|CDD|173752 cd07861, STKc_CDK1_euk, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

 Score = 51.3 bits (123), Expect = 1e-07
 Identities = 52/180 (28%), Positives = 74/180 (41%), Gaps = 29/180 (16%)

Query: 33  KPERCLDGIDMR--CKVVDFGNACRA----NKQFAEEIQTRQYRAPEVILRAG-YSFSVD 85
           KP+  L  ID +   K+ DFG A RA     + +  E+ T  YRAPEV+L +  YS  VD
Sbjct: 128 KPQNLL--IDNKGVIKLADFGLA-RAFGIPVRVYTHEVVTLWYRAPEVLLGSPRYSTPVD 184

Query: 86  MWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDR 145
           +WS      E+AT   LF      G  E  D L  +  ++G     +  G     DY   
Sbjct: 185 IWSIGTIFAEMATKKPLF-----HGDSEI-DQLFRIFRILGTPTEDVWPGVTSLPDY--- 235

Query: 146 HGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 205
                       W    L        E    +  + L  +L + P KR +A++ L HP+ 
Sbjct: 236 ------KNTFPKWKKGSLRSAVKNLDE----DGLDLLEKMLIYDPAKRISAKKALNHPYF 285

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression. CDK1/cyclin A2 has also been implicated as an important regulator of S phase events. The CDK1/cyclin B complex is critical for G2 to M phase transition. It induces mitosis by activating nuclear enzymes that regulate chromatin condensation, nuclear membrane degradation, mitosis-specific microtubule and cytoskeletal reorganization. CDK1 also associates with cyclin E and plays a role in the entry into S phase. CDK1 transcription is stable throughout the cell cycle but is modulated in some pathological conditions. It may play a role in regulating apoptosis under these conditions. In breast cancer cells, HER2 can mediate apoptosis by inactivating CDK1. Activation of CDK1 may contribute to HIV-1 induced apoptosis and neuronal apoptosis in neurodegenerative diseases. Length = 285

>gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

 Score = 50.8 bits (122), Expect = 1e-07
 Identities = 24/69 (34%), Positives = 30/69 (43%), Gaps = 2/69 (2%)

Query: 33  KPERCLDGIDMRCKVVDFGNAC--RANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFA 90
           KP+  L        + DF  A     +        T  Y APEV+ R GYS +VD WS  
Sbjct: 127 KPDNILLDEQGHVHITDFNIATKVTPDTLTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLG 186

Query: 91  CTAFELATG 99
            TA+E   G
Sbjct: 187 VTAYECLRG 195

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258

>gnl|CDD|173671 cd05580, STKc_PKA, Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

 Score = 51.0 bits (123), Expect = 1e-07
 Identities = 25/78 (32%), Positives = 36/78 (46%), Gaps = 20/78 (25%)

Query: 33  KPERCLDGIDMR--CKVVDFGNACRANKQFAEEIQTR--------QYRAPEVILRAGYSF 82
           KPE  L  +D     K+ DFG        FA+ ++ R        +Y APE+IL  GY  
Sbjct: 128 KPENLL--LDSDGYIKITDFG--------FAKRVKGRTYTLCGTPEYLAPEIILSKGYGK 177

Query: 83  SVDMWSFACTAFELATGD 100
           +VD W+     +E+  G 
Sbjct: 178 AVDWWALGILIYEMLAGY 195

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. Length = 290

>gnl|CDD|143376 cd07871, STKc_PCTAIRE3, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

 Score = 50.0 bits (119), Expect = 2e-07
 Identities = 50/178 (28%), Positives = 79/178 (44%), Gaps = 24/178 (13%)

Query: 33  KPERCLDGIDMRCKVVDFGNACRA----NKQFAEEIQTRQYRAPEVILRAG-YSFSVDMW 87
           KP+  L       K+ DFG A RA     K ++ E+ T  YR P+V+L +  YS  +DMW
Sbjct: 130 KPQNLLINEKGELKLADFGLA-RAKSVPTKTYSNEVVTLWYRPPDVLLGSTEYSTPIDMW 188

Query: 88  SFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHG 147
              C  +E+ATG  +F P S       ++ L L+  L+G  P +    G  S + F  + 
Sbjct: 189 GVGCILYEMATGRPMF-PGSTV-----KEELHLIFRLLG-TPTEETWPGITSNEEFRSYL 241

Query: 148 DLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 205
             +   +       RL        +TD     + L  LL +  + R +A+  L+H + 
Sbjct: 242 FPQYRAQPLINHAPRL--------DTDG---IDLLSSLLLYETKSRISAEAALRHSYF 288

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filaments (PHFs) and stimulate Tau phosphorylation. As AD progresses, phosphorylated Tau aggregates and forms PHFs, which leads to the formation of neurofibrillary tangles (NFTs). In human glioma cells, PCTAIRE-3 induces cell cycle arrest and cell death. Length = 288

>gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

 Score = 49.9 bits (120), Expect = 2e-07
 Identities = 43/176 (24%), Positives = 58/176 (32%), Gaps = 46/176 (26%)

Query: 33  KPERCLDGIDMRCKVVDFG---NACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSF 89
           KP   L       K+ DFG          Q    + T  Y +PE I    YS++ D+WS 
Sbjct: 127 KPSNLLINSKGEVKIADFGISKVLENTLDQCNTFVGTVTYMSPERIQGESYSYAADIWSL 186

Query: 90  ACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDL 149
             T  E A G   F P     F E       +M+ I                        
Sbjct: 187 GLTLLECALGKFPFLPPGQPSFFE-------LMQAI-----------CDGPPPSLPAE-- 226

Query: 150 KRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 205
                               FS     EF +F+   L   P+KRP+A + LQHP++
Sbjct: 227 -------------------EFSP----EFRDFISACLQKDPKKRPSAAELLQHPFI 259

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264

>gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

 Score = 50.0 bits (120), Expect = 3e-07
 Identities = 41/174 (23%), Positives = 61/174 (35%), Gaps = 61/174 (35%)

Query: 44  RCKVVDFGNACRANKQFAEEIQTRQ-------YRAPEVI-----LRAGYSFSVDMWSFAC 91
             K+VDFG     + Q    +  R        + APEVI       A Y    D+WS   
Sbjct: 151 EVKLVDFG----VSAQLDSTLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGI 206

Query: 92  TAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKR 151
           TA ELA G     P      C+     AL      K+PR                     
Sbjct: 207 TAIELADGK---PP-----LCDMHPMRALF-----KIPRNPP----------------PT 237

Query: 152 IRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 205
           ++  + WS                ++F +F+   L    E+RP  ++ L+HP++
Sbjct: 238 LKSPENWS----------------KKFNDFISECLIKNYEQRPFMEELLEHPFI 275

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275

>gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

 Score = 49.5 bits (119), Expect = 3e-07
 Identities = 25/90 (27%), Positives = 36/90 (40%), Gaps = 23/90 (25%)

Query: 33  KPERCLDGIDMRCKVVDFGNAC--------RANKQFAEEIQ---------------TRQY 69
           KPE  L   DM  K+ DFG A          +NK  A  I                T +Y
Sbjct: 129 KPENILLDKDMHIKITDFGTAKVLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEY 188

Query: 70  RAPEVILRAGYSFSVDMWSFACTAFELATG 99
            +PE++       S D+W+  C  +++ TG
Sbjct: 189 VSPELLNEKPAGKSSDLWALGCIIYQMLTG 218

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280

>gnl|CDD|240233 PTZ00024, PTZ00024, cyclin-dependent protein kinase; Provisional

 Score = 49.8 bits (119), Expect = 3e-07
 Identities = 35/101 (34%), Positives = 47/101 (46%), Gaps = 26/101 (25%)

Query: 45  CKVVDFGNACR-----------------ANKQFAEEIQTRQYRAPEVILRAG-YSFSVDM 86
           CK+ DFG A R                   ++   ++ T  YRAPE+++ A  Y F+VDM
Sbjct: 158 CKIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDM 217

Query: 87  WSFACTAFELATGDMLFAPKSGQGFCEDE-DHLALMMELIG 126
           WS  C   EL TG  LF         E+E D L  + EL+G
Sbjct: 218 WSVGCIFAELLTGKPLFPG-------ENEIDQLGRIFELLG 251

Length = 335

>gnl|CDD|165478 PHA03212, PHA03212, serine/threonine kinase US3; Provisional

 Score = 49.2 bits (117), Expect = 5e-07
 Identities = 50/168 (29%), Positives = 71/168 (42%), Gaps = 30/168 (17%)

Query: 49  DFGNAC-----RANKQF--AEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATG-D 100
           DFG AC      ANK +  A  I T    APE++ R  Y  +VD+WS     FE+AT  D
Sbjct: 225 DFGAACFPVDINANKYYGWAGTIATN---APELLARDPYGPAVDIWSAGIVLFEMATCHD 281

Query: 101 MLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRR----LK 156
            LF      G C+ +  + L++   G  P +  I  AQ+       G  K+  R      
Sbjct: 282 SLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPI-DAQANLDEIYIGLAKKSSRKPGSRP 340

Query: 157 FWS-LDRLLVDKYRFSETDAREFAEFLV-PLLDFTPEKRPTAQQCLQH 202
            W+ L  L +D             E+L+  +L F    RP+A+  L  
Sbjct: 341 LWTNLYELPID------------LEYLICKMLAFDAHHRPSAEALLDF 376

Length = 391

>gnl|CDD|177649 PLN00009, PLN00009, cyclin-dependent kinase A; Provisional

 Score = 49.0 bits (117), Expect = 6e-07
 Identities = 53/185 (28%), Positives = 74/185 (40%), Gaps = 40/185 (21%)

Query: 33  KPERCLDGIDMR---CKVVDFGNACRA----NKQFAEEIQTRQYRAPEVILRA-GYSFSV 84
           KP+  L  ID R    K+ DFG A RA     + F  E+ T  YRAPE++L +  YS  V
Sbjct: 129 KPQNLL--IDRRTNALKLADFGLA-RAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPV 185

Query: 85  DMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFD 144
           D+WS  C   E+     LF   S      + D L  +  ++G    +   G     DY  
Sbjct: 186 DIWSVGCIFAEMVNQKPLFPGDS------EIDELFKIFRILGTPNEETWPGVTSLPDYKS 239

Query: 145 -----RHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQC 199
                   DL  +      +L+   VD               L  +L   P KR TA+  
Sbjct: 240 AFPKWPPKDLATV----VPTLEPAGVD--------------LLSKMLRLDPSKRITARAA 281

Query: 200 LQHPW 204
           L+H +
Sbjct: 282 LEHEY 286

Length = 294

>gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

 Score = 47.9 bits (114), Expect = 1e-06
 Identities = 25/60 (41%), Positives = 30/60 (50%), Gaps = 5/60 (8%)

Query: 45  CKVVDFGNACR---ANKQFAEEIQTRQYRAPEVILRA--GYSFSVDMWSFACTAFELATG 99
            K+ DFG + R    N        T QY APEVI +   GY    D+WS  CT  E+ATG
Sbjct: 148 VKISDFGTSKRLAGINPCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATG 207

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268

>gnl|CDD|173673 cd05582, STKc_RSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

 Score = 47.9 bits (114), Expect = 1e-06
 Identities = 28/77 (36%), Positives = 38/77 (49%), Gaps = 3/77 (3%)

Query: 33  KPERCLDGIDMRCKVVDFG---NACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSF 89
           KPE  L   +   K+ DFG    +    K+      T +Y APEV+ R G++ S D WSF
Sbjct: 125 KPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSF 184

Query: 90  ACTAFELATGDMLFAPK 106
               FE+ TG + F  K
Sbjct: 185 GVLMFEMLTGSLPFQGK 201

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. Length = 318

>gnl|CDD|143374 cd07869, STKc_PFTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

 Score = 47.4 bits (112), Expect = 2e-06
 Identities = 48/179 (26%), Positives = 74/179 (41%), Gaps = 21/179 (11%)

Query: 33  KPERCLDGIDMRCKVVDFGNACRA----NKQFAEEIQTRQYRAPEVILRAG-YSFSVDMW 87
           KP+  L       K+ DFG A RA    +  ++ E+ T  YR P+V+L +  YS  +DMW
Sbjct: 130 KPQNLLISDTGELKLADFGLA-RAKSVPSHTYSNEVVTLWYRPPDVLLGSTEYSTCLDMW 188

Query: 88  SFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHG 147
              C   E+  G   F      G  + +D L  +  ++G  P +    G  S  +F    
Sbjct: 189 GVGCIFVEMIQGVAAFP-----GMKDIQDQLERIFLVLG-TPNEDTWPGVHSLPHF---- 238

Query: 148 DLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLS 206
              +  R   +S   L     + S  +  E  +    LL   P+ R +AQ  L H + S
Sbjct: 239 ---KPERFTLYSPKNLRQAWNKLSYVNHAE--DLASKLLQCFPKNRLSAQAALSHEYFS 292

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 and is inhibited by the p21 cell cycle inhibitor. It has also been shown to interact with the membrane-associated cyclin Y, which recruits the protein to the plasma membrane. Length = 303

>gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

 Score = 47.1 bits (112), Expect = 2e-06
 Identities = 27/93 (29%), Positives = 39/93 (41%), Gaps = 2/93 (2%)

Query: 33  KPERCLDGIDMRCKVVDFGNAC--RANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFA 90
           KPE  L       ++ D G A   +  K+      T  Y APEV+    Y FSVD ++  
Sbjct: 122 KPENVLLDDHGNVRISDLGLAVELKGGKKIKGRAGTPGYMAPEVLQGEVYDFSVDWFALG 181

Query: 91  CTAFELATGDMLFAPKSGQGFCEDEDHLALMME 123
           CT +E+  G   F  +  +   E+     L M 
Sbjct: 182 CTLYEMIAGRSPFRQRKEKVEKEELKRRTLEMA 214

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277

>gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

 Score = 47.0 bits (112), Expect = 2e-06
 Identities = 47/181 (25%), Positives = 65/181 (35%), Gaps = 47/181 (25%)

Query: 46  KVVDFGNACRA-NKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFA 104
           K+ DFG +    N        T  Y APE I    YS + D+WS   T  E+A     F 
Sbjct: 145 KLCDFGVSGELVNSLAGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFP 204

Query: 105 PKSGQGFCEDEDHLAL--MMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDR 162
           P       E E  L    ++  I  MP        + KD      +         WS   
Sbjct: 205 P-------EGEPPLGPIELLSYIVNMPN------PELKD------EPGNGI---KWS--- 239

Query: 163 LLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNSTRDETKNKSNVE 222
                         EF +F+   L+  P +RPT    L+HPW+      + + K K N+ 
Sbjct: 240 -------------EEFKDFIKQCLEKDPTRRPTPWDMLEHPWI------KAQMKKKVNMA 280

Query: 223 K 223
           K
Sbjct: 281 K 281

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287

>gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

 Score = 46.8 bits (111), Expect = 3e-06
 Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 9/63 (14%)

Query: 46  KVVDFGNACR-----ANKQFAEEIQ----TRQYRAPEVILRAGYSFSVDMWSFACTAFEL 96
           K++DFG A R      +   +  ++    T  + APEVI  +GY    D+WS  CT FE+
Sbjct: 142 KLIDFGCARRLAWVGLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEM 201

Query: 97  ATG 99
           ATG
Sbjct: 202 ATG 204

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265

>gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

 Score = 46.3 bits (110), Expect = 4e-06
 Identities = 34/159 (21%), Positives = 53/159 (33%), Gaps = 48/159 (30%)

Query: 46  KVVDFGNACRANKQFAE-EIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFA 104
           K+ D G +    K  A+ +I T  Y APEV     YS+  D+WS  C  +E+AT    F 
Sbjct: 143 KIGDLGISKVLKKNMAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFE 202

Query: 105 PKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLL 164
            +S             M +L  K+ R            +                     
Sbjct: 203 ARS-------------MQDLRYKVQR----------GKYP-------------------- 219

Query: 165 VDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHP 203
                     +++   F+  +L   P+ RP   + L  P
Sbjct: 220 ----PIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILASP 254

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256

>gnl|CDD|143367 cd07862, STKc_CDK6, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

 Score = 46.2 bits (109), Expect = 4e-06
 Identities = 52/175 (29%), Positives = 78/175 (44%), Gaps = 25/175 (14%)

Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEE--IQTRQYRAPEVILRAGYSFSVDMWSFA 90
           KP+  L     + K+ DFG A   + Q A    + T  YRAPEV+L++ Y+  VD+WS  
Sbjct: 137 KPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVG 196

Query: 91  CTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLK 150
           C   E+     LF   S      D D L  ++++IG +P          +D+        
Sbjct: 197 CIFAEMFRRKPLFRGSS------DVDQLGKILDVIG-LP--------GEEDWPRDVA--- 238

Query: 151 RIRRLKFWSLDRLLVDKYRFSETDAREFA-EFLVPLLDFTPEKRPTAQQCLQHPW 204
            + R  F S     ++K+    TD  E   + L+  L F P KR +A   L HP+
Sbjct: 239 -LPRQAFHSKSAQPIEKF---VTDIDELGKDLLLKCLTFNPAKRISAYSALSHPY 289

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytoplasm. It is also present in the ruffling edge of spreading fibroblasts and may play a role in cell spreading. It binds to the p21 inhibitor without any effect on its own activity and it is overexpressed in squamous cell carcinomas and neuroblastomas. CDK6 has also been shown to inhibit cell differentiation in many cell types. Length = 290

>gnl|CDD|173753 cd07864, STKc_CDK12, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

 Score = 45.5 bits (108), Expect = 7e-06
 Identities = 44/172 (25%), Positives = 72/172 (41%), Gaps = 37/172 (21%)

Query: 46  KVVDFGNACRANKQ----FAEEIQTRQYRAPEVIL-RAGYSFSVDMWSFACTAFELATGD 100
           K+ DFG A   N +    +  ++ T  YR PE++L    Y  ++D+WS  C   EL T  
Sbjct: 156 KLADFGLARLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKK 215

Query: 101 MLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSL 160
            +F     Q   E        +ELI +      + G+     +        + +L +++ 
Sbjct: 216 PIF-----QANQE-----LAQLELISR------LCGSPCPAVW------PDVIKLPYFNT 253

Query: 161 -------DRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 205
                   R L +++ F  T A    + L  +L   P KR TA++ L  PWL
Sbjct: 254 MKPKKQYRRRLREEFSFIPTPA---LDLLDHMLTLDPSKRCTAEEALNSPWL 302

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely expressed in tissues. It interacts with cyclins L1 and L2, and plays roles in regulating transcription and alternative splicing. Length = 302

>gnl|CDD|173698 cd05607, STKc_GRK7, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

 Score = 44.9 bits (106), Expect = 1e-05
 Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 2/73 (2%)

Query: 33  KPERCLDGIDMRCKVVDFGNAC--RANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFA 90
           KPE  L      C++ D G A   +  K   +   T  Y APE++    YS+ VD ++  
Sbjct: 122 KPENVLLDDQGNCRLSDLGLAVELKDGKTITQRAGTNGYMAPEILKEEPYSYPVDWFAMG 181

Query: 91  CTAFELATGDMLF 103
           C+ +E+  G   F
Sbjct: 182 CSIYEMVAGRTPF 194

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual group of GRKs. It is primarily found in the retina and plays a role in the regulation of opsin light receptors. GRK7 is located in retinal cone outer segments and plays an important role in regulating photoresponse of the cones. Length = 277

>gnl|CDD|173691 cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

 Score = 45.1 bits (107), Expect = 1e-05
 Identities = 27/76 (35%), Positives = 34/76 (44%), Gaps = 3/76 (3%)

Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACT 92
           KPE  L       K+ DFG +          + +  Y APEV+   GY F+VD WS  C 
Sbjct: 128 KPENFLIDASGHIKLTDFGLSKGIVTYANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCM 187

Query: 93  AFELATGDMLFAPKSG 108
            +E   G   F P SG
Sbjct: 188 LYEFLCG---FPPFSG 200

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. Dbf2p is important in regulating the mitotic exit network (MEN) and in cytokinesis. Length = 333

>gnl|CDD|173684 cd05593, STKc_PKB_gamma, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

 Score = 44.3 bits (104), Expect = 2e-05
 Identities = 50/177 (28%), Positives = 75/177 (42%), Gaps = 32/177 (18%)

Query: 42  DMRCKVVDFGNACRANKQFAEEIQT----RQYRAPEVILRAGYSFSVDMWSFACTAFELA 97
           D   K+ DFG  C+     A  ++T     +Y APEV+    Y  +VD W      +E+ 
Sbjct: 131 DGHIKITDFG-LCKEGITDAATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 189

Query: 98  TGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIA------IGGAQSKDYFDRHG---- 147
            G + F  +  +   E    L LM ++  K PR ++      + G   KD   R G    
Sbjct: 190 CGRLPFYNQDHEKLFE----LILMEDI--KFPRTLSADAKSLLSGLLIKDPNKRLGGGPD 243

Query: 148 DLKRIRRLKFWS-------LDRLLVDKYR---FSETDAREF-AEFLVPLLDFTPEKR 193
           D K I R  F++        D+ LV  ++    SETD R F  EF    +  TP ++
Sbjct: 244 DAKEIMRHSFFTGVNWQDVYDKKLVPPFKPQVTSETDTRYFDEEFTAQTITITPPEK 300

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulated in estrogen-deficient breast cancer cells, androgen-independent prostate cancer cells, and primary ovarian tumors. It acts as a key mediator in the genesis of ovarian cancer. Length = 328

>gnl|CDD|177557 PHA03209, PHA03209, serine/threonine kinase US3; Provisional

 Score = 44.5 bits (105), Expect = 2e-05
 Identities = 43/175 (24%), Positives = 72/175 (41%), Gaps = 21/175 (12%)

Query: 38  LDGIDMRCKVVDFGNA-CRANK-QFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFE 95
           ++ +D  C + D G A        F     T +  APEV+ R  Y+   D+WS     FE
Sbjct: 190 INDVDQVC-IGDLGAAQFPVVAPAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFE 248

Query: 96  -LATGDMLF--APKSGQGFCED-EDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLK- 150
            LA    +F   P + + + +    HL  ++  +   P +           F R    + 
Sbjct: 249 MLAYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVHPEE-----------FPRDPGSRL 297

Query: 151 RIRRLKFWSLDRLLVDKY-RFSETDAREFAEFLV-PLLDFTPEKRPTAQQCLQHP 203
               +++ SL+R    +Y  F   +     EFLV  +L F    RP+A++ L +P
Sbjct: 298 VRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEILNYP 352

Length = 357

>gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

 Score = 44.2 bits (105), Expect = 2e-05
 Identities = 41/169 (24%), Positives = 62/169 (36%), Gaps = 51/169 (30%)

Query: 38  LDGIDMRCKVVDFGNA--CRANKQFAEE-IQTRQYRAPEVILRAGYSFSVDMWSFACTAF 94
           LD  +   K+ DFG A     +  FA+  + T  Y +PE +    Y    D+WS  C  +
Sbjct: 143 LDA-NNNVKLGDFGLAKILGHDSSFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIY 201

Query: 95  ELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRR 154
           EL      F  ++          L L          KI  G               + RR
Sbjct: 202 ELCALSPPFTARN---------QLQLA--------SKIKEG---------------KFRR 229

Query: 155 LKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHP 203
           +            YR+S     E  E +  +L+  P+KRP+ ++ LQ P
Sbjct: 230 I-----------PYRYSS----ELNEVIKSMLNVDPDKRPSTEELLQLP 263

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265

>gnl|CDD|132975 cd06644, STKc_STK10_LOK, Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

 Score = 43.9 bits (103), Expect = 3e-05
 Identities = 46/180 (25%), Positives = 69/180 (38%), Gaps = 53/180 (29%)

Query: 41  IDMRCKVVDFGNACRANKQFAEE---IQTRQYRAPEVIL-----RAGYSFSVDMWSFACT 92
           +D   K+ DFG + +  K        I T  + APEV++        Y +  D+WS   T
Sbjct: 145 LDGDIKLADFGVSAKNVKTLQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGIT 204

Query: 93  AFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRI 152
             E+A               E   H     EL    P ++ +  A+S        +   +
Sbjct: 205 LIEMAQ-------------IEPPHH-----EL---NPMRVLLKIAKS--------EPPTL 235

Query: 153 RRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNSTR 212
            +   WS+                EF +FL   LD  PE RP+A Q L+HP++S   S R
Sbjct: 236 SQPSKWSM----------------EFRDFLKTALDKHPETRPSAAQLLEHPFVSSVTSNR 279

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. Length = 292

>gnl|CDD|173710 cd05620, STKc_nPKC_delta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

 Score = 43.8 bits (103), Expect = 3e-05
 Identities = 39/123 (31%), Positives = 56/123 (45%), Gaps = 17/123 (13%)

Query: 38  LDGIDMRCKVVDFGNACRAN----KQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTA 93
           LD  D   K+ DFG  C+ N     + +    T  Y APE++    Y+FSVD WSF    
Sbjct: 129 LDR-DGHIKIADFG-MCKENVFGDNRASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLL 186

Query: 94  FELATGDMLFAPKSGQGFCEDEDHLALMMEL-IGKMPRKIAIGGAQSKDYFDRHGDLKRI 152
           +E+  G    +P  G    +DED L   + +     PR I     +SKD  ++  +    
Sbjct: 187 YEMLIGQ---SPFHG----DDEDELFESIRVDTPHYPRWITK---ESKDILEKLFERDPT 236

Query: 153 RRL 155
           RRL
Sbjct: 237 RRL 239

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. It slows down cell proliferation, inducing cell cycle arrest and enhancing cell differentiation. PKC-delta is also involved in the regulation of transcription as well as immune and inflammatory responses. It plays a central role in the genotoxic stress response that leads to DNA damaged-induced apoptosis. Length = 316

>gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

 Score = 43.3 bits (102), Expect = 4e-05
 Identities = 29/94 (30%), Positives = 42/94 (44%), Gaps = 13/94 (13%)

Query: 38  LDGIDMRCKVVDFGNACRANKQF--AEEIQ-----TRQYRAPEVILRAGYSFSVDMWSFA 90
           +D    R ++ DFG A R   +   A E Q     T  + APEV+    Y  S D+WS  
Sbjct: 136 IDSTGQRLRIADFGAAARLAAKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVG 195

Query: 91  CTAFELATGDMLFAPKSGQGFCEDEDHLALMMEL 124
           C   E+AT       K      +  +HLAL+ ++
Sbjct: 196 CVIIEMATA------KPPWNAEKHSNHLALIFKI 223

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268

>gnl|CDD|132988 cd06657, STKc_PAK4, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

 Score = 43.1 bits (101), Expect = 5e-05
 Identities = 40/168 (23%), Positives = 63/168 (37%), Gaps = 48/168 (28%)

Query: 42  DMRCKVVDFGNACRANKQFAEE---IQTRQYRAPEVILRAGYSFSVDMWSFACTAFELAT 98
           D R K+ DFG   + +K+       + T  + APE+I R  Y   VD+WS      E+  
Sbjct: 152 DGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVD 211

Query: 99  GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFW 158
           G+  +          +E  L  M  +   +P K+               +L ++      
Sbjct: 212 GEPPYF---------NEPPLKAMKMIRDNLPPKLK--------------NLHKVSPSLKG 248

Query: 159 SLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLS 206
            LDRLLV                        P +R TA + L+HP+L+
Sbjct: 249 FLDRLLVRD----------------------PAQRATAAELLKHPFLA 274

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. Length = 292

>gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

 Score = 43.1 bits (102), Expect = 5e-05
 Identities = 43/164 (26%), Positives = 60/164 (36%), Gaps = 49/164 (29%)

Query: 46  KVVDFGNACRANKQFAEE---IQTRQYRAPEVI---LRAGYSFSVDMWSFACTAFELATG 99
           K+ DFG + +     A+    I T  + APEV     + GY    D+W+   TA ELA  
Sbjct: 141 KLADFGVSAQLTATIAKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAEL 200

Query: 100 DMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWS 159
                P         + H    + LI K                          +LK   
Sbjct: 201 Q---PPMF-------DLHPMRALFLISKSNFPPP--------------------KLK--- 227

Query: 160 LDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHP 203
                 DK ++S      F +F+   L   P+KRPTA + LQHP
Sbjct: 228 ------DKEKWSP----VFHDFIKKCLTKDPKKRPTATKLLQHP 261

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262

>gnl|CDD|173333 PTZ00036, PTZ00036, glycogen synthase kinase; Provisional

 Score = 42.7 bits (100), Expect = 8e-05
 Identities = 29/84 (34%), Positives = 46/84 (54%), Gaps = 9/84 (10%)

Query: 46  KVVDFGNA--CRANKQFAEEIQTRQYRAPEVILRA-GYSFSVDMWSFACTAFELATGDML 102
           K+ DFG+A    A ++    I +R YRAPE++L A  Y+  +D+WS  C   E+  G  +
Sbjct: 211 KLCDFGSAKNLLAGQRSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPI 270

Query: 103 FAPKSGQGFCEDEDHLALMMELIG 126
           F   SGQ      D L  +++++G
Sbjct: 271 F---SGQ---SSVDQLVRIIQVLG 288

Length = 440

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score = 42.1 bits (100), Expect = 8e-05
 Identities = 31/138 (22%), Positives = 46/138 (33%), Gaps = 47/138 (34%)

Query: 66  TRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELI 125
           T  Y +PE+     Y++  D+WS  C  +EL T    F  ++             ++EL 
Sbjct: 166 TPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGEN-------------LLELA 212

Query: 126 GKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPL 185
                KI              G    I                ++S     E    +  L
Sbjct: 213 ----LKI------------LKGQYPPIPS--------------QYS----SELRNLVSSL 238

Query: 186 LDFTPEKRPTAQQCLQHP 203
           L   PE+RP+  Q LQ P
Sbjct: 239 LQKDPEERPSIAQILQSP 256

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|132989 cd06658, STKc_PAK5, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

 Score = 42.3 bits (99), Expect = 9e-05
 Identities = 43/169 (25%), Positives = 66/169 (39%), Gaps = 48/169 (28%)

Query: 42  DMRCKVVDFGNACRANKQFAEE---IQTRQYRAPEVILRAGYSFSVDMWSFACTAFELAT 98
           D R K+ DFG   + +K+  +    + T  + APEVI R  Y   VD+WS      E+  
Sbjct: 154 DGRIKLSDFGFCAQVSKEVPKRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMID 213

Query: 99  GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFW 158
           G+  +          +E  L  M  +   +P ++               D  ++  +   
Sbjct: 214 GEPPYF---------NEPPLQAMRRIRDNLPPRVK--------------DSHKVSSVLRG 250

Query: 159 SLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSL 207
            LD +LV          RE            P +R TAQ+ LQHP+L L
Sbjct: 251 FLDLMLV----------RE------------PSQRATAQELLQHPFLKL 277

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly expressed in the brain. It is not required for viability, but together with PAK6, it is required for normal levels of locomotion and activity, and for learning and memory. PAK5 cooperates with Inca (induced in neural crest by AP2) in the regulation of cell adhesion and cytoskeletal organization in the embryo and in neural crest cells during craniofacial development. PAK5 may also play a role in controlling the signaling of Raf-1, an effector of Ras, at the mitochondria. Length = 292

>gnl|CDD|143375 cd07870, STKc_PFTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

 Score = 42.3 bits (99), Expect = 1e-04
 Identities = 43/179 (24%), Positives = 71/179 (39%), Gaps = 23/179 (12%)

Query: 33  KPERCLDGIDMRCKVVDFGNACRA----NKQFAEEIQTRQYRAPEVILRA-GYSFSVDMW 87
           KP+  L       K+ DFG A RA    ++ ++ E+ T  YR P+V+L A  YS ++D+W
Sbjct: 130 KPQNLLISYLGELKLADFGLA-RAKSIPSQTYSSEVVTLWYRPPDVLLGATDYSSALDIW 188

Query: 88  SFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHG 147
              C   E+  G   F      G  +  + L  +  ++G        G ++  +Y     
Sbjct: 189 GAGCIFIEMLQGQPAFP-----GVSDVFEQLEKIWTVLGVPTEDTWPGVSKLPNYKP--- 240

Query: 148 DLKRIRRLKFWSLDRLLVDKY-RFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 205
                         + L   + R S     E  +    +L   P+ R +AQ  L HP+ 
Sbjct: 241 ------EWFLPCKPQQLRVVWKRLSRPPKAE--DLASQMLMMFPKDRISAQDALLHPYF 291

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recessive form of juvenile ALS. The function of PFTAIRE-2 is not yet known. Length = 291

>gnl|CDD|173683 cd05592, STKc_nPKC_theta_delta, Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

 Score = 42.1 bits (99), Expect = 1e-04
 Identities = 39/156 (25%), Positives = 55/156 (35%), Gaps = 53/156 (33%)

Query: 42  DMRCKVVDFGNACRAN----KQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELA 97
           D   K+ DFG  C+ N     + +    T  Y APE++    Y+ SVD WSF    +E+ 
Sbjct: 132 DGHIKIADFG-MCKENMNGEGKASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEML 190

Query: 98  TGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKF 157
            G    +P  G    EDED L                                      F
Sbjct: 191 IGQ---SPFHG----EDEDEL--------------------------------------F 205

Query: 158 WSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKR 193
            S   +L D+  F    ++E  + L  L +  P KR
Sbjct: 206 DS---ILNDRPHFPRWISKEAKDCLSKLFERDPTKR 238

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. Length = 316

>gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

 Score = 41.6 bits (97), Expect = 1e-04
 Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 3/71 (4%)

Query: 33  KPERCLDGIDMRCKVVDFGNACR---ANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSF 89
           K +  L G+D   K+ DFG   +      + +  + T  + APEV+ R  Y   VD+WS 
Sbjct: 143 KSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSL 202

Query: 90  ACTAFELATGD 100
              A E+  G+
Sbjct: 203 GIMAIEMIEGE 213

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296

>gnl|CDD|173662 cd05571, STKc_PKB, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

 Score = 41.3 bits (97), Expect = 2e-04
 Identities = 47/177 (26%), Positives = 72/177 (40%), Gaps = 32/177 (18%)

Query: 42  DMRCKVVDFGNACRANKQFAEEIQ----TRQYRAPEVILRAGYSFSVDMWSFACTAFELA 97
           D   K+ DFG  C+        ++    T +Y APEV+    Y  +VD W      +E+ 
Sbjct: 131 DGHIKITDFG-LCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 189

Query: 98  TGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIA------IGGAQSKDYFDRHG---- 147
            G + F  +  +   E    L LM E+  + PR ++      + G   KD   R G    
Sbjct: 190 CGRLPFYNQDHEKLFE----LILMEEI--RFPRTLSPEAKSLLAGLLKKDPKQRLGGGPE 243

Query: 148 DLKRIRRLKFWS-------LDRLLVDKYR---FSETDAREF-AEFLVPLLDFTPEKR 193
           D K I   +F++       + + L   ++    SETD R F  EF    +  TP  R
Sbjct: 244 DAKEIMEHRFFASINWQDVVQKKLEPPFKPQVTSETDTRYFDEEFTAQSITITPPDR 300

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having been implicated in tumor initiation, progression, and metastasis. Length = 323

>gnl|CDD|143373 cd07868, STKc_CDK8, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

 Score = 41.6 bits (97), Expect = 2e-04
 Identities = 49/176 (27%), Positives = 76/176 (43%), Gaps = 22/176 (12%)

Query: 44  RCKVVDFGNACRAN---KQFAE---EIQTRQYRAPEVILRA-GYSFSVDMWSFACTAFEL 96
           R K+ D G A   N   K  A+    + T  YRAPE++L A  Y+ ++D+W+  C   EL
Sbjct: 150 RVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAEL 209

Query: 97  ATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGG-AQSKDYFD-----RHGDL- 149
            T + +F        C  ED          ++ R   + G    KD+ D      H  L 
Sbjct: 210 LTSEPIF-------HCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLM 262

Query: 150 KRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 205
           K  RR  + +   +   +    + D++ F   L  LL   P KR T++Q +Q P+ 
Sbjct: 263 KDFRRNTYTNCSLIKYMEKHKVKPDSKAF-HLLQKLLTMDPIKRITSEQAMQDPYF 317

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDK8 phosphorylates cyclin H, a subunit of the general transcription factor TFIIH, which results in the inhibition of TFIIH-dependent phosphorylation of the C-terminal domain (CTD) of RNAP II, facilitating the inhibition of transcription. It has also been shown to promote transcription by a mechanism that is likely to involve RNAP II phosphorylation. CDK8 also functions as a stimulus-specific positive coregulator of p53 transcriptional responses. Length = 317

>gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

 Score = 41.3 bits (97), Expect = 2e-04
 Identities = 43/174 (24%), Positives = 65/174 (37%), Gaps = 52/174 (29%)

Query: 38  LDGIDMRCKVVDFGNACRANKQFAEEIQTRQ-----YRAPEVI--LRAGYSFSVDMWSFA 90
            DGI   CK+ DFG + +++  +  +          + APEVI     GYS  VD+WS  
Sbjct: 143 ADGI---CKISDFGISKKSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLG 199

Query: 91  CTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLK 150
           C   E+  G     P S      DE+ +A M +L                      G+ +
Sbjct: 200 CVVLEMFAGRR---PWS------DEEAIAAMFKL----------------------GNKR 228

Query: 151 RIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPW 204
               +       L           +    +FL       P+ RPTA++ LQHP+
Sbjct: 229 SAPPIPPDVSMNL-----------SPVALDFLNACFTINPDNRPTARELLQHPF 271

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272

>gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

 Score = 41.1 bits (97), Expect = 2e-04
 Identities = 34/142 (23%), Positives = 53/142 (37%), Gaps = 45/142 (31%)

Query: 66  TRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLAL--MME 123
           T  Y APE I    YS   D+WS   +  ELATG   + P       E++    +  +++
Sbjct: 162 TSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPP-------ENDPPDGIFELLQ 214

Query: 124 LIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLV 183
            I   P                                RL   K  FS     +F +F+ 
Sbjct: 215 YIVNEPPP------------------------------RLPSGK--FSP----DFQDFVN 238

Query: 184 PLLDFTPEKRPTAQQCLQHPWL 205
             L   P +RP+ ++ L+HP++
Sbjct: 239 LCLIKDPRERPSYKELLEHPFI 260

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265

>gnl|CDD|132953 cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

 Score = 41.0 bits (96), Expect = 2e-04
 Identities = 44/189 (23%), Positives = 65/189 (34%), Gaps = 52/189 (27%)

Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAE-EIQTRQYRAPEVIL------RAGYSFSVD 85
           KP   L   + + K+ DFG +       A+  I  + Y APE I          Y+   D
Sbjct: 130 KPTNVLVNGNGQVKLCDFGVSGNLVASLAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSD 189

Query: 86  MWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDR 145
           +WS   +  E+A G   + P       E   ++   +  I                    
Sbjct: 190 VWSLGLSILEMALGRYPYPP-------ETYANIFAQLSAI-------------------V 223

Query: 146 HGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 205
            GD               L   Y     DA++F       L+  P +RPT  Q L+HPWL
Sbjct: 224 DGDPPT------------LPSGY---SDDAQDFVA---KCLNKIPNRRPTYAQLLEHPWL 265

Query: 206 -SLRNSTRD 213
              +N+  D
Sbjct: 266 VKYKNADVD 274

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Polymyxin B resistance protein 2 (PBS2) from Saccharomyces cerevisiae, Wis1 from Schizosaccharomyces pombe, and related proteins. PBS2 and Wis1 are components of stress-activated MAPK cascades in budding and fission yeast, respectively. PBS2 is the specific activator of the MAPK Hog1, which plays a central role in the response of budding yeast to stress including exposure to arsenite and hyperosmotic environments. Wis1 phosphorylates and activates the MAPK Sty1 (also called Spc1 or Phh1), which stimulates a transcriptional response to a wide range of cellular insults through the bZip transcription factors Atf1, Pcr1, and Pap1. Length = 286

>gnl|CDD|173685 cd05594, STKc_PKB_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

 Score = 41.2 bits (96), Expect = 2e-04
 Identities = 48/174 (27%), Positives = 75/174 (43%), Gaps = 32/174 (18%)

Query: 42  DMRCKVVDFGNACRANKQFAEEIQT----RQYRAPEVILRAGYSFSVDMWSFACTAFELA 97
           D   K+ DFG  C+   +    ++T     +Y APEV+    Y  +VD W      +E+ 
Sbjct: 132 DGHIKITDFG-LCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 190

Query: 98  TGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIA------IGGAQSKDYFDRHG---- 147
            G + F  +  +   E    L LM E+  + PR ++      + G   KD   R G    
Sbjct: 191 CGRLPFYNQDHEKLFE----LILMEEI--RFPRTLSPEAKSLLSGLLKKDPKQRLGGGPD 244

Query: 148 DLKRIRRLKFWS-------LDRLLVDKYR---FSETDAREF-AEFLVPLLDFTP 190
           D K I + KF++        ++ LV  ++    SETD R F  EF   ++  TP
Sbjct: 245 DAKEIMQHKFFAGIVWQDVYEKKLVPPFKPQVTSETDTRYFDEEFTAQMITITP 298

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficient in PKB-alpha exhibit perinatal morbidity, growth retardation, reduction in body weight accompanied by reduced sizes of multiple organs, and enhanced apoptosis in some cell types. PKB-alpha activity has been reported to be frequently elevated in breast and prostate cancers. In some cancer cells, PKB-alpha may act as a suppressor of metastasis. Length = 325

>gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

 Score = 40.9 bits (95), Expect = 3e-04
 Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 3/71 (4%)

Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEE---IQTRQYRAPEVILRAGYSFSVDMWSF 89
           K +  L G+D   K+ DFG   +   + ++    + T  + APEV+ R  Y   VD+WS 
Sbjct: 142 KSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSL 201

Query: 90  ACTAFELATGD 100
              A E+  G+
Sbjct: 202 GIMAIEMVEGE 212

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297

>gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

 Score = 40.5 bits (95), Expect = 3e-04
 Identities = 28/71 (39%), Positives = 31/71 (43%), Gaps = 9/71 (12%)

Query: 33  KPERCLDGIDMR--CKVVDFG--NACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWS 88
           KPE  L  ID     K+ DFG       NK+F   + T  Y APE IL  G     D WS
Sbjct: 124 KPENLL--IDQTGHLKLTDFGLSRNGLENKKF---VGTPDYLAPETILGVGDDKMSDWWS 178

Query: 89  FACTAFELATG 99
             C  FE   G
Sbjct: 179 LGCVIFEFLFG 189

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260

>gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

 Score = 40.4 bits (94), Expect = 3e-04
 Identities = 42/163 (25%), Positives = 62/163 (38%), Gaps = 50/163 (30%)

Query: 46  KVVDFGNACR-ANKQFAEE--IQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDML 102
           K+ DFG A +  + Q      + T  + APEVI ++ Y    D+WS   TA ELA G+  
Sbjct: 141 KLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGE-- 198

Query: 103 FAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDR 162
             P S       + H   ++ LI K       G                           
Sbjct: 199 -PPNS-------DMHPMRVLFLIPKNNPPTLTG--------------------------- 223

Query: 163 LLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 205
                  FS    + F EF+   L+  P  RPTA++ L+H ++
Sbjct: 224 ------EFS----KPFKEFIDACLNKDPSFRPTAKELLKHKFI 256

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277

>gnl|CDD|132946 cd06615, PKc_MEK, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

 Score = 40.5 bits (95), Expect = 4e-04
 Identities = 39/180 (21%), Positives = 63/180 (35%), Gaps = 23/180 (12%)

Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEE-IQTRQYRAPEVILRAGYSFSVDMWSFAC 91
           KP   L       K+ DFG + +     A   + TR Y +PE +    Y+   D+WS   
Sbjct: 127 KPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYTVQSDIWSLGL 186

Query: 92  TAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKR 151
           +  E+A G     P        D   L  M                +S      H     
Sbjct: 187 SLVEMAIGRYPIPP-------PDAKELEAMFG-----RPVSEGEAKESHRPVSGHPPDSP 234

Query: 152 IRRLKFWSLDRLL------VDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 205
                F  LD ++      +    FS+    EF +F+   L   P++R   ++  +HP++
Sbjct: 235 RPMAIFELLDYIVNEPPPKLPSGAFSD----EFQDFVDKCLKKNPKERADLKELTKHPFI 290

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the downstream targets, ERK(extracellular signal-regulated kinase) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1/2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. This cascade has also been implicated in synaptic plasticity, migration, morphological determination, and stress response immunological reactions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1/2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 308

>gnl|CDD|143372 cd07867, STKc_CDC2L6, Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

 Score = 40.4 bits (94), Expect = 4e-04
 Identities = 49/177 (27%), Positives = 82/177 (46%), Gaps = 24/177 (13%)

Query: 44  RCKVVDFGNACRAN---KQFAE---EIQTRQYRAPEVILRA-GYSFSVDMWSFACTAFEL 96
           R K+ D G A   N   K  A+    + T  YRAPE++L A  Y+ ++D+W+  C   EL
Sbjct: 150 RVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAEL 209

Query: 97  ATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGG-AQSKDYFD-----RHGDLK 150
            T + +F        C  ED          ++ R  ++ G    KD+ D      +  L+
Sbjct: 210 LTSEPIF-------HCRQEDIKTSNPFHHDQLDRIFSVMGFPADKDWEDIRKMPEYPTLQ 262

Query: 151 RIRRLKFWSLDRLL--VDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 205
           +  R   ++   L+  ++K++  + D++ F   L  LL   P KR T++Q LQ P+ 
Sbjct: 263 KDFRRTTYANSSLIKYMEKHKV-KPDSKVFL-LLQKLLTMDPTKRITSEQALQDPYF 317

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as the caspase-processed CDK11(p46). CDK11(p110), CDK11(p58), and CDK11(p46)do not belong to this subfamily. CDC2L6 is an associated protein of Mediator, a multiprotein complex that provides a platform to connect transcriptional and chromatin regulators and cofactors, in order to activate and mediate RNA polymerase II transcription. CDC2L6 is localized mainly in the nucleus amd exerts an opposing effect to CDK8 in VP16-dependent transcriptional activation by being a negative regulator. Length = 317

>gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

 Score = 40.0 bits (93), Expect = 5e-04
 Identities = 23/58 (39%), Positives = 32/58 (55%), Gaps = 3/58 (5%)

Query: 46  KVVDFGNACR-ANKQFAEE--IQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGD 100
           K+ DFG A +  + Q      + T  + APEVI ++ Y F  D+WS   TA ELA G+
Sbjct: 141 KLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGE 198

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277

>gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

 Score = 40.1 bits (94), Expect = 5e-04
 Identities = 40/181 (22%), Positives = 63/181 (34%), Gaps = 59/181 (32%)

Query: 46  KVVDFGNACRANKQFAEE---IQTRQYRAPEVIL-----RAGYSFSVDMWSFACTAFELA 97
           K+ DFG + +      +    I T  + APEV+         Y +  D+WS   T  ELA
Sbjct: 143 KLADFGVSAKNKSTLQKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELA 202

Query: 98  TGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKF 157
                          E   H    M ++ K+ +                 +   + +   
Sbjct: 203 QM-------------EPPHHELNPMRVLLKILK----------------SEPPTLDQPSK 233

Query: 158 WSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNSTRDETKN 217
           WS                  F +FL   L   P+ RPTA + L+HP++S      D++ N
Sbjct: 234 WS----------------SSFNDFLKSCLVKDPDDRPTAAELLKHPFVS------DQSDN 271

Query: 218 K 218
           K
Sbjct: 272 K 272

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280

>gnl|CDD|173703 cd05612, STKc_PRKX_like, Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

 Score = 39.7 bits (93), Expect = 6e-04
 Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 16/75 (21%)

Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTR--------QYRAPEVILRAGYSFSV 84
           KPE  L   +   K+ DFG        FA++++ R        +Y APEVI   G++ +V
Sbjct: 128 KPENILLDKEGHIKLTDFG--------FAKKLRDRTWTLCGTPEYLAPEVIQSKGHNKAV 179

Query: 85  DMWSFACTAFELATG 99
           D W+     +E+  G
Sbjct: 180 DWWALGILIYEMLVG 194

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. Length = 291

>gnl|CDD|173676 cd05585, STKc_YPK1_like, Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

 Score = 39.5 bits (92), Expect = 7e-04
 Identities = 44/187 (23%), Positives = 70/187 (37%), Gaps = 56/187 (29%)

Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQT----RQYRAPEVILRAGYSFSVDMWS 88
           KPE  L        + DFG  C+ N +  ++  T     +Y APE++L  GY+ +VD W+
Sbjct: 120 KPENILLDYQGHIALCDFG-LCKLNMKDDDKTNTFCGTPEYLAPELLLGHGYTKAVDWWT 178

Query: 89  FACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGD 148
                +E+ TG   F          DE+        + +M RKI                
Sbjct: 179 LGVLLYEMLTGLPPFY---------DEN--------VNEMYRKI---------------- 205

Query: 149 LKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKR---PTAQQCLQHPWL 205
                          L +  RF +   R+  + L+ LL   P +R     AQ+   HP+ 
Sbjct: 206 ---------------LQEPLRFPDGFDRDAKDLLIGLLSRDPTRRLGYNGAQEIKNHPFF 250

Query: 206 SLRNSTR 212
           S  +  +
Sbjct: 251 SQLSWKK 257

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It plays a role in cell growth and sexual development. Length = 312

>gnl|CDD|173764 cd08224, STKc_Nek6_Nek7, Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

 Score = 39.3 bits (92), Expect = 8e-04
 Identities = 20/72 (27%), Positives = 30/72 (41%), Gaps = 11/72 (15%)

Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEE-------IQTRQYRAPEVILRAGYSFSVD 85
           KP           K+ D G      + F+ +       + T  Y +PE I   GY+F  D
Sbjct: 133 KPANVFITATGVVKLGDLG----LGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSD 188

Query: 86  MWSFACTAFELA 97
           +WS  C  +E+A
Sbjct: 189 IWSLGCLLYEMA 200

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|173700 cd05609, STKc_MAST, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

 Score = 39.4 bits (92), Expect = 8e-04
 Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 2/51 (3%)

Query: 51  GNACRANKQFAEE--IQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATG 99
           G+  +  ++F ++    T +Y APEVILR GY   VD W+     +E   G
Sbjct: 162 GHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVG 212

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. MAST1, MAST2, and MAST3 bind and phosphorylate the tumor suppressor PTEN, and may contribute to the regulation and stabilization of PTEN. MAST2 is involved in the regulation of the Fc-gamma receptor of the innate immune response in macrophages, and may also be involved in the regulation of the Na+/H+ exchanger NHE3. Length = 305

>gnl|CDD|132968 cd06637, STKc_TNIK, Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

 Score = 39.3 bits (91), Expect = 9e-04
 Identities = 44/168 (26%), Positives = 66/168 (39%), Gaps = 54/168 (32%)

Query: 46  KVVDFGNACRANKQFAEE---IQTRQYRAPEVIL-----RAGYSFSVDMWSFACTAFELA 97
           K+VDFG + + ++        I T  + APEVI       A Y F  D+WS   TA E+A
Sbjct: 151 KLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMA 210

Query: 98  TGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKF 157
            G    AP      C+     AL +     +PR  A                 R++  K 
Sbjct: 211 EG----APP----LCDMHPMRALFL-----IPRNPA----------------PRLKSKK- 240

Query: 158 WSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 205
           WS                ++F  F+   L     +RPT +Q ++HP++
Sbjct: 241 WS----------------KKFQSFIESCLVKNHSQRPTTEQLMKHPFI 272

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activates the c-Jun N-terminal kinase (JNK) pathway and plays a role in regulating the actin cytoskeleton. Length = 272

>gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 39.4 bits (92), Expect = 9e-04
 Identities = 19/59 (32%), Positives = 26/59 (44%), Gaps = 6/59 (10%)

Query: 46  KVVDFGNA------CRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELAT 98
           K+ DFG +      C +         T  + +PEVI   GY    D+WS  CT  E+ T
Sbjct: 144 KLGDFGASKRLQTICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLT 202

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263

>gnl|CDD|140289 PTZ00263, PTZ00263, protein kinase A catalytic subunit; Provisional

 Score = 39.4 bits (92), Expect = 0.001
 Identities = 23/67 (34%), Positives = 30/67 (44%)

Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACT 92
           KPE  L       KV DFG A +   +      T +Y APEVI   G+  +VD W+    
Sbjct: 145 KPENLLLDNKGHVKVTDFGFAKKVPDRTFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVL 204

Query: 93  AFELATG 99
            +E   G
Sbjct: 205 LYEFIAG 211

Length = 329

>gnl|CDD|132990 cd06659, STKc_PAK6, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

 Score = 39.2 bits (91), Expect = 0.001
 Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 3/71 (4%)

Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEE---IQTRQYRAPEVILRAGYSFSVDMWSF 89
           K +  L  +D R K+ DFG   + +K   +    + T  + APEVI R  Y   VD+WS 
Sbjct: 144 KSDSILLTLDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRTPYGTEVDIWSL 203

Query: 90  ACTAFELATGD 100
                E+  G+
Sbjct: 204 GIMVIEMVDGE 214

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role in stress responses through its activation by the mitogen-activated protein kinase (MAPK) p38 and MAPK kinase 6 (MKK6) pathway. PAK6 is highly expressed in the brain. It is not required for viability, but together with PAK5, it is required for normal levels of locomotion and activity, and for learning and memory. Increased expression of PAK6 is found in primary and metastatic prostate cancer. PAK6 may play a role in the regulation of motility. Length = 297

>gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

 Score = 39.3 bits (91), Expect = 0.001
 Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 3/71 (4%)

Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEE---IQTRQYRAPEVILRAGYSFSVDMWSF 89
           K +  L G+D   K+ DFG   +   + ++    + T  + APEV+ R  Y   VD+WS 
Sbjct: 142 KSDNVLLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSL 201

Query: 90  ACTAFELATGD 100
              A E+  G+
Sbjct: 202 GIMAIEMVEGE 212

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296

>gnl|CDD|173661 cd05570, STKc_PKC, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

 Score = 39.3 bits (92), Expect = 0.001
 Identities = 24/85 (28%), Positives = 35/85 (41%), Gaps = 13/85 (15%)

Query: 38  LDGIDMRCKVVDFGNACRANKQFAEEIQ----TRQYRAPEVILRAGYSFSVDMWSFACTA 93
           LD  +   K+ DFG  C+              T  Y APE++    Y  +VD W+     
Sbjct: 129 LDS-EGHIKIADFG-MCKEGILGGVTTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLL 186

Query: 94  FELATGDMLFAPKSGQGFCEDEDHL 118
           +E+  G    +P  G    +DED L
Sbjct: 187 YEMLAGQ---SPFEG----DDEDEL 204

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only require PS. PKCs phosphorylate and modify the activities of a wide variety of cellular proteins including receptors, enzymes, cytoskeletal proteins, transcription factors, and other kinases. They play a central role in signal transduction pathways that regulate cell migration and polarity, proliferation, differentiation, and apoptosis. Also included in this subfamily are the PKC-like proteins, called PKNs. Length = 318

>gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

 Score = 38.7 bits (90), Expect = 0.001
 Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 3/71 (4%)

Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEE---IQTRQYRAPEVILRAGYSFSVDMWSF 89
           K +  L G+D   K+ DFG   +   + ++    + T  + APEV+ R  Y   VD+WS 
Sbjct: 142 KSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSL 201

Query: 90  ACTAFELATGD 100
              A E+  G+
Sbjct: 202 GIMAIEMVEGE 212

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293

>gnl|CDD|173678 cd05587, STKc_cPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

 Score = 38.6 bits (90), Expect = 0.002
 Identities = 28/80 (35%), Positives = 35/80 (43%), Gaps = 18/80 (22%)

Query: 46  KVVDFGNACRAN-------KQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELAT 98
           K+ DFG  C+ N       + F     T  Y APE+I    Y  SVD W+F    +E+  
Sbjct: 141 KIADFG-MCKENIFGGKTTRTFC---GTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLA 196

Query: 99  GDMLFAPKSGQGFCEDEDHL 118
           G     P  G    EDED L
Sbjct: 197 GQ---PPFDG----EDEDEL 209

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory domain. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. cPKCs are potent kinases for histones, myelin basic protein, and protamine. PKC-gamma is mainly expressed in neuronal tissues. It plays a role in protection from ischemia. Length = 324

>gnl|CDD|173677 cd05586, STKc_Sck1_like, Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

 Score = 38.8 bits (90), Expect = 0.002
 Identities = 27/82 (32%), Positives = 35/82 (42%), Gaps = 5/82 (6%)

Query: 33  KPERCLDGIDMRCKVVDFGNA---CRANKQFAEEIQTRQYRAPEVIL-RAGYSFSVDMWS 88
           KPE  L        + DFG +      NK       T +Y APEV+L   GY+  VD WS
Sbjct: 123 KPENILLDATGHIALCDFGLSKANLTDNKTTNTFCGTTEYLAPEVLLDEKGYTKHVDFWS 182

Query: 89  FACTAFELATG-DMLFAPKSGQ 109
                FE+  G    +A  + Q
Sbjct: 183 LGVLVFEMCCGWSPFYAEDTQQ 204

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of yeast to environmental changes. Length = 330

>gnl|CDD|173675 cd05584, STKc_p70S6K, Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

 Score = 38.6 bits (90), Expect = 0.002
 Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 17/77 (22%)

Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQ----------TRQYRAPEVILRAGYSF 82
           KPE  L       K+ DFG  C+      E I           T +Y APE+++R+G+  
Sbjct: 127 KPENILLDAQGHVKLTDFG-LCK------ESIHEGTVTHTFCGTIEYMAPEILMRSGHGK 179

Query: 83  SVDMWSFACTAFELATG 99
           +VD WS     +++ TG
Sbjct: 180 AVDWWSLGALMYDMLTG 196

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the insulin receptor substrate IRS-1, among others. Mammals contain two isoforms of p70S6K, named S6K1 and S6K2 (or S6K-beta). Length = 323

>gnl|CDD|173707 cd05616, STKc_cPKC_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

 Score = 38.4 bits (89), Expect = 0.002
 Identities = 30/80 (37%), Positives = 36/80 (45%), Gaps = 18/80 (22%)

Query: 46  KVVDFGNACRAN-------KQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELAT 98
           K+ DFG  C+ N       K F     T  Y APE+I    Y  SVD W+F    +E+  
Sbjct: 141 KIADFG-MCKENMWDGVTTKTFC---GTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLA 196

Query: 99  GDMLFAPKSGQGFCEDEDHL 118
           G    AP  G    EDED L
Sbjct: 197 GQ---APFEG----EDEDEL 209

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. The PKC beta isoforms (I and II), generated by alternative splicing of a single gene, are preferentially activated by hyperglycemia-induced DAG in retinal tissues. This is implicated in diabetic microangiopathy such as ischemia, neovascularization, and abnormal vasodilator function. PKC-beta also plays an important role in VEGF signaling. In addition, glucose regulates proliferation in retinal endothelial cells via PKC-betaI. PKC-beta is also being explored as a therapeutic target in cancer. It contributes to tumor formation and is involved in the tumor host mechanisms of inflammation and angiogenesis. Length = 323

>gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

 Score = 38.2 bits (89), Expect = 0.002
 Identities = 44/171 (25%), Positives = 65/171 (38%), Gaps = 56/171 (32%)

Query: 42  DMRCKVVDFGNACRANKQFAEEIQTRQ-------YRAPEVILRAGYSFSVDMWSFACTAF 94
           D R K+ DFG  C    Q ++E+  R+       + APEVI R  Y   VD+WS      
Sbjct: 151 DGRVKLSDFG-FC---AQVSKEVPRRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVI 206

Query: 95  ELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRR 154
           E+  G+  +          +E  L  M  +   +P K+            ++      R 
Sbjct: 207 EMVDGEPPYF---------NEPPLQAMKRIRDNLPPKL------------KNLHKVSPRL 245

Query: 155 LKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 205
             F  LDR+LV          R+            P +R TA + L HP+L
Sbjct: 246 RSF--LDRMLV----------RD------------PAQRATAAELLNHPFL 272

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285

>gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

 Score = 37.8 bits (88), Expect = 0.002
 Identities = 28/91 (30%), Positives = 40/91 (43%), Gaps = 12/91 (13%)

Query: 44  RCKVVDFGNACRANKQFAEEIQ---TRQYRAPEVILRA-GYSFSVDMWSFACTAFELATG 99
             K+ DFG A   N+  ++      T  + APEVI     Y    D+WS   T +E+ATG
Sbjct: 139 NVKLCDFGVAALLNQNSSKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATG 198

Query: 100 DMLFAPKSGQGFCEDEDHLALMMELIGKMPR 130
           +    P S       +   A+M+    K PR
Sbjct: 199 N---PPYSDV-----DAFRAMMLIPKSKPPR 221

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277

>gnl|CDD|173763 cd08223, STKc_Nek4, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

 Score = 37.6 bits (87), Expect = 0.003
 Identities = 33/143 (23%), Positives = 53/143 (37%), Gaps = 49/143 (34%)

Query: 64  IQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMME 123
           I T  Y +PE+     Y++  D+W+  C  +E+AT    F  K         D  +L+  
Sbjct: 163 IGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAK---------DMNSLVYR 213

Query: 124 LI-GKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFL 182
           +I GK+P          KDY                                + E  E +
Sbjct: 214 IIEGKLP-------PMPKDY--------------------------------SPELGELI 234

Query: 183 VPLLDFTPEKRPTAQQCLQHPWL 205
             +L   PEKRP+ +  L+ P++
Sbjct: 235 ATMLSKRPEKRPSVKSILRQPYI 257

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. Length = 257

>gnl|CDD|173686 cd05595, STKc_PKB_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

 Score = 37.7 bits (87), Expect = 0.003
 Identities = 46/187 (24%), Positives = 76/187 (40%), Gaps = 36/187 (19%)

Query: 42  DMRCKVVDFGNACRANKQFAEEIQ----TRQYRAPEVILRAGYSFSVDMWSFACTAFELA 97
           D   K+ DFG  C+        ++    T +Y APEV+    Y  +VD W      +E+ 
Sbjct: 131 DGHIKITDFG-LCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 189

Query: 98  TGDMLFAPKSGQGFCEDEDHL--ALMMELIGKMPRKIA------IGGAQSKDYFDRHG-- 147
            G + F       + +D + L   ++ME I + PR ++      + G   KD   R G  
Sbjct: 190 CGRLPF-------YNQDHERLFELILMEEI-RFPRTLSPEAKSLLAGLLKKDPKQRLGGG 241

Query: 148 --DLKRIRRLKFWS-------LDRLLVDKYR---FSETDAREF-AEFLVPLLDFTPEKRP 194
             D K +   +F+        + + L+  ++    SE D R F  EF    +  TP  R 
Sbjct: 242 PSDAKEVMEHRFFLSINWQDVVQKKLLPPFKPQVTSEVDTRYFDDEFTAQSITITPPDRY 301

Query: 195 TAQQCLQ 201
            +   L+
Sbjct: 302 DSLGLLE 308

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in PKB-beta display normal growth weights but exhibit severe insulin resistance and diabetes, accompanied by lipoatrophy and B-cell failure. Length = 323

>gnl|CDD|132947 cd06616, PKc_MKK4, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

 Score = 37.7 bits (88), Expect = 0.003
 Identities = 22/59 (37%), Positives = 30/59 (50%), Gaps = 5/59 (8%)

Query: 46  KVVDFGNACRANKQFAE--EIQTRQYRAPEVIL---RAGYSFSVDMWSFACTAFELATG 99
           K+ DFG + +     A+  +   R Y APE I    R GY    D+WS   T +E+ATG
Sbjct: 148 KLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATG 206

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates the downstream targets, c-Jun N-terminal kinase (JNK) and p38 MAPK, on specific threonine and tyrosine residues. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. Their activation is associated with the induction of cell death. Mice deficient in MKK4 die during embryogenesis and display anemia, severe liver hemorrhage, and abnormal hepatogenesis. MKK4 may also play roles in the immune system and in cardiac hypertrophy. It plays a major role in cancer as a tumor and metastasis suppressor. Under certain conditions, MKK4 is pro-oncogenic. Length = 288

>gnl|CDD|173665 cd05574, STKc_phototropin_like, Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

 Score = 37.6 bits (88), Expect = 0.003
 Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 5/39 (12%)

Query: 66  TRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFA 104
           T +Y APEVI   G+  +VD W+     +E     ML+ 
Sbjct: 195 TEEYIAPEVISGDGHGSAVDWWTLGILLYE-----MLYG 228

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-terminal photosensory domain and a C-terminal catalytic domain. The N-terminal domain contains two LOV (Light, Oxygen or Voltage) domains that binds FMN. Photoexcitation of the LOV domains results in autophosphorylation at multiple sites and activation of the catalytic domain. Neurospora crassa nrc-2 plays a role in growth and development by controlling entry into the conidiation program. Length = 316

>gnl|CDD|173690 cd05599, STKc_NDR_like, Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score = 37.7 bits (88), Expect = 0.003
 Identities = 18/52 (34%), Positives = 23/52 (44%), Gaps = 8/52 (15%)

Query: 66  TRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDH 117
           T  Y APEV L+ GY+   D WS     +E+  G   + P     FC D   
Sbjct: 202 TPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVG---YPP-----FCSDNPQ 245

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplication. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. This subfamily also contains fungal NDR-like kinases. Length = 364

>gnl|CDD|173719 cd05630, STKc_GRK6, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

 Score = 37.3 bits (86), Expect = 0.004
 Identities = 22/73 (30%), Positives = 31/73 (42%), Gaps = 2/73 (2%)

Query: 33  KPERCLDGIDMRCKVVDFGNACRA--NKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFA 90
           KPE  L       ++ D G A      +     + T  Y APEV+    Y+FS D W+  
Sbjct: 129 KPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALG 188

Query: 91  CTAFELATGDMLF 103
           C  +E+  G   F
Sbjct: 189 CLLYEMIAGQSPF 201

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK6 plays important roles in the regulation of dopamine, M3 muscarinic, opioid, and chemokine receptor signaling. It also plays maladaptive roles in addiction and Parkinson's disease. GRK6-deficient mice exhibit altered dopamine receptor regulation, decreased lymphocyte chemotaxis, and increased acute inflammation and neutrophil chemotaxis. Length = 285

>gnl|CDD|173709 cd05619, STKc_nPKC_theta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

 Score = 37.6 bits (87), Expect = 0.004
 Identities = 27/81 (33%), Positives = 37/81 (45%), Gaps = 12/81 (14%)

Query: 42  DMRCKVVDFGNACRAN----KQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELA 97
           D   K+ DFG  C+ N     +      T  Y APE++L   Y+ SVD WSF    +E+ 
Sbjct: 132 DGHIKIADFG-MCKENMLGDAKTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEML 190

Query: 98  TGDMLFAPKSGQGFCEDEDHL 118
            G    +P  G     DE+ L
Sbjct: 191 IGQ---SPFHGH----DEEEL 204

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. Although T-cells also express other PKC isoforms, PKC-theta is unique in that upon antigen stimulation, it is translocated to the plasma membrane at the immunological synapse, where it mediates signals essential for T-cell activation. It is essential for TCR-induced proliferation, cytokine production, T-cell survival, and the differentiation and effector function of T-helper (Th) cells, particularly Th2 and Th17. PKC-theta is being developed as a therapeutic target for Th2-mediated allergic inflammation and Th17-mediated autoimmune diseases. Length = 316

>gnl|CDD|173616 PTZ00426, PTZ00426, cAMP-dependent protein kinase catalytic subunit; Provisional

 Score = 37.3 bits (86), Expect = 0.004
 Identities = 21/67 (31%), Positives = 32/67 (47%)

Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACT 92
           KPE  L   D   K+ DFG A   + +      T +Y APE++L  G+  + D W+    
Sbjct: 158 KPENLLLDKDGFIKMTDFGFAKVVDTRTYTLCGTPEYIAPEILLNVGHGKAADWWTLGIF 217

Query: 93  AFELATG 99
            +E+  G
Sbjct: 218 IYEILVG 224

Length = 340

>gnl|CDD|132951 cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

 Score = 37.1 bits (86), Expect = 0.004
 Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 1/60 (1%)

Query: 46  KVVDFGNACRANKQFAEE-IQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFA 104
           K+ DFG +       A+  + T  Y +PE I    Y+   D+WS   +  ELA G   FA
Sbjct: 144 KLCDFGVSGELINSIADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFA 203

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Byr1 from Schizosaccharomyces pombe, FUZ7 from Ustilago maydis, and related proteins. Byr1 phosphorylates its downstream target, the MAPK Spk1, and is regulated by the MAPKKK Byr2. The Spk1 cascade is pheromone-responsive and is essential for sporulation and sexual differentiation in fission yeast. FUZ7 phosphorylates and activates its target, the MAPK Crk1, which is required in mating and virulence in U. maydis. Length = 284

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	237
KOG0660	359	consensus Mitogen-activated protein kinase [Signal	100.0
KOG0593	396	consensus Predicted protein kinase KKIAMRE [Genera	100.0
KOG0667	586	consensus Dual-specificity tyrosine-phosphorylatio	100.0
KOG0581	364	consensus Mitogen-activated protein kinase kinase	100.0
KOG0659	318	consensus Cdk activating kinase (CAK)/RNA polymera	100.0
KOG0661	538	consensus MAPK related serine/threonine protein ki	100.0
KOG0592	604	consensus 3-phosphoinositide-dependent protein kin	100.0
KOG0594	323	consensus Protein kinase PCTAIRE and related kinas	100.0
KOG0663	419	consensus Protein kinase PITSLRE and related kinas	100.0
KOG0600	560	consensus Cdc2-related protein kinase [Cell cycle	100.0
KOG0615	475	consensus Serine/threonine protein kinase Chk2 and	100.0
KOG0588	786	consensus Serine/threonine protein kinase [Cell cy	100.0
KOG0575	592	consensus Polo-like serine/threonine protein kinas	100.0
KOG0599	411	consensus Phosphorylase kinase gamma subunit [Carb	100.0
KOG0658	364	consensus Glycogen synthase kinase-3 [Carbohydrate	100.0
KOG0671	415	consensus LAMMER dual specificity kinases [Signal	100.0
KOG0598	357	consensus Ribosomal protein S6 kinase and related	100.0
PTZ00284	467	protein kinase; Provisional	100.0
KOG0578	550	consensus p21-activated serine/threonine protein k	100.0
KOG0616	355	consensus cAMP-dependent protein kinase catalytic	100.0
KOG0033	355	consensus Ca2+/calmodulin-dependent protein kinase	100.0
KOG0582	516	consensus Ste20-like serine/threonine protein kina	100.0
KOG0583	370	consensus Serine/threonine protein kinase [Signal	100.0
KOG0198	313	consensus MEKK and related serine/threonine protei	100.0
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	100.0
KOG0665	369	consensus Jun-N-terminal kinase (JNK) [Signal tran	100.0
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	100.0
KOG0605	550	consensus NDR and related serine/threonine kinases	100.0
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	100.0
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	100.0
KOG0666	438	consensus Cyclin C-dependent kinase CDK8 [Transcri	100.0
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	100.0
PTZ00036	440	glycogen synthase kinase; Provisional	100.0
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	100.0
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	100.0
KOG0694	694	consensus Serine/threonine protein kinase [Signal	100.0
PHA03212	391	serine/threonine kinase US3; Provisional	100.0
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	100.0
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	99.98
KOG0604	400	consensus MAP kinase-activated protein kinase 2 [S	99.98
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	99.98
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	99.97
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	99.97
KOG0597	808	consensus Serine-threonine protein kinase FUSED [G	99.97
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	99.97
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	99.97
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	99.97
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	99.97
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	99.97
PTZ00263	329	protein kinase A catalytic subunit; Provisional	99.97
KOG0585	576	consensus Ca2+/calmodulin-dependent protein kinase	99.97
KOG0986	591	consensus G protein-coupled receptor kinase [Signa	99.97
KOG4717	864	consensus Serine/threonine protein kinase [Signal	99.97
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	99.97
KOG1290	590	consensus Serine/threonine protein kinase [Signal	99.97
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	99.97
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	99.97
PHA03207	392	serine/threonine kinase US3; Provisional	99.97
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	99.97
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	99.97
KOG0669	376	consensus Cyclin T-dependent kinase CDK9 [Cell cyc	99.97
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	99.97
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	99.97
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	99.97
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	99.97
KOG0032	382	consensus Ca2+/calmodulin-dependent protein kinase	99.97
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	99.97
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	99.97
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	99.97
KOG0662	292	consensus Cyclin-dependent kinase CDK5 [Intracellu	99.97
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	99.97
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	99.97
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	99.97
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	99.97
PHA03210	501	serine/threonine kinase US3; Provisional	99.97
KOG0591	375	consensus NIMA (never in mitosis)-related G2-speci	99.97
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	99.97
PHA03209	357	serine/threonine kinase US3; Provisional	99.97
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	99.97
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	99.97
KOG0983	391	consensus Mitogen-activated protein kinase (MAPK)	99.97
KOG0595	429	consensus Serine/threonine-protein kinase involved	99.96
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	99.96
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	99.96
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	99.96
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	99.96
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	99.96
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	99.96
PHA03211	461	serine/threonine kinase US3; Provisional	99.96
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	99.96
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	99.96
KOG0580	281	consensus Serine/threonine protein kinase [Cell cy	99.96
KOG0668	338	consensus Casein kinase II, alpha subunit [Signal	99.96
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	99.96
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	99.96
KOG0610	459	consensus Putative serine/threonine protein kinase	99.96
KOG0579	1187	consensus Ste20-like serine/threonine protein kina	99.96
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	99.96
KOG0201	467	consensus Serine/threonine protein kinase [Signal	99.96
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.96
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	99.96
KOG0192	362	consensus Tyrosine kinase specific for activated (	99.96
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	99.96
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	99.96
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	99.96
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	99.96
PLN00034	353	mitogen-activated protein kinase kinase; Provision	99.96
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	99.96
KOG4279	1226	consensus Serine/threonine protein kinase [Signal	99.96
PTZ00283	496	serine/threonine protein kinase; Provisional	99.96
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	99.96
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	99.96
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	99.96
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	99.96
KOG0670	752	consensus U4/U6-associated splicing factor PRP4 [R	99.96
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	99.96
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	99.96
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	99.96
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	99.96
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	99.96
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	99.96
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	99.96
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	99.96
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	99.96
KOG0690	516	consensus Serine/threonine protein kinase [Signal	99.96
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	99.96
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	99.96
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	99.96
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	99.96
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	99.96
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	99.96
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	99.96
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	99.96
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	99.96
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	99.96
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	99.96
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	99.96
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	99.96
PTZ00267	478	NIMA-related protein kinase; Provisional	99.96
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	99.96
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	99.96
KOG0614	732	consensus cGMP-dependent protein kinase [Signal tr	99.96
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	99.96
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	99.96
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	99.96
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	99.96
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	99.96
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	99.96
KOG0197	468	consensus Tyrosine kinases [Signal transduction me	99.96
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	99.96
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	99.95
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	99.95
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	99.95
PLN00009	294	cyclin-dependent kinase A; Provisional	99.95
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	99.95
KOG0574	502	consensus STE20-like serine/threonine kinase MST [	99.95
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	99.95
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	99.95
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	99.95
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	99.95
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	99.95
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	99.95
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	99.95
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	99.95
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	99.95
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	99.95
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	99.95
KOG0664	449	consensus Nemo-like MAPK-related serine/threonine	99.95
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	99.95
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	99.95
KOG0611	668	consensus Predicted serine/threonine protein kinas	99.95
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	99.95
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	99.95
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	99.95
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	99.95
PTZ00024	335	cyclin-dependent protein kinase; Provisional	99.95
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	99.95
KOG0577	948	consensus Serine/threonine protein kinase [Signal	99.95
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	99.95
KOG0589	426	consensus Serine/threonine protein kinase [General	99.95
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	99.95
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	99.95
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	99.95
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	99.95
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	99.95
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	99.95
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	99.95
KOG4721	904	consensus Serine/threonine protein kinase, contain	99.95
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	99.95
PHA02988	283	hypothetical protein; Provisional	99.95
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	99.95
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	99.95
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	99.95
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	99.95
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	99.95
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	99.95
KOG4645	1509	consensus MAPKKK (MAP kinase kinase kinase) SSK2 a	99.95
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	99.95
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	99.95
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	99.95
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	99.95
PHA02882	294	putative serine/threonine kinase; Provisional	99.95
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	99.95
KOG0596	677	consensus Dual specificity; serine/threonine and t	99.94
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	99.94
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	99.94
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	99.94
KOG0612	1317	consensus Rho-associated, coiled-coil containing p	99.94
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	99.94
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	99.94
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	99.94
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	99.94
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	99.94
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	99.94
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	99.94
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	99.94
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	99.94
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	99.94
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	99.94
PLN00181	793	protein SPA1-RELATED; Provisional	99.94
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	99.94
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	99.94
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	99.94
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	99.94
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	99.94
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	99.94
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	99.94
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	99.94
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	99.94
KOG1989	738	consensus ARK protein kinase family [Signal transd	99.94
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	99.94
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	99.94
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	99.94
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	99.94
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	99.94
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	99.94
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	99.94
PTZ00266	1021	NIMA-related protein kinase; Provisional	99.94
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	99.94
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	99.94
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	99.94
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	99.94
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	99.94
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	99.94
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	99.93
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	99.93
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	99.93
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	99.93
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	99.93
KOG1026	774	consensus Nerve growth factor receptor TRKA and re	99.93
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	99.93
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	99.93
KOG2345	302	consensus Serine/threonine protein kinase/TGF-beta	99.93
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	99.93
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	99.93
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	99.93
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	99.93
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	99.93
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	99.93
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	99.93
KOG0696	683	consensus Serine/threonine protein kinase [Signal	99.93
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	99.93
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	99.93
KOG0193	678	consensus Serine/threonine protein kinase RAF [Sig	99.93
KOG0607	463	consensus MAP kinase-interacting kinase and relate	99.93
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	99.93
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	99.93
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	99.93
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	99.93
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	99.93
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	99.93
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	99.93
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	99.93
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	99.93
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	99.93
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	99.93
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	99.93
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	99.93
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	99.93
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	99.93
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	99.93
KOG0586	596	consensus Serine/threonine protein kinase [General	99.93
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	99.93
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	99.93
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	99.93
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	99.93
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	99.93
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	99.93
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	99.93
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	99.93
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	99.93
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	99.93
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	99.93
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	99.93
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	99.93
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	99.93
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	99.93
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	99.93
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	99.93
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	99.93
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	99.93
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	99.93
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	99.92
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	99.92
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	99.92
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	99.92
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	99.92
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	99.92
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	99.92
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	99.92
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	99.92
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	99.92
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	99.92
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	99.92
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	99.92
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	99.92
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	99.92
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	99.92
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	99.92
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	99.92
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	99.92
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	99.92
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	99.92
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	99.92
KOG1006	361	consensus Mitogen-activated protein kinase (MAPK)	99.92
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	99.92
KOG0584	632	consensus Serine/threonine protein kinase [General	99.92
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	99.92
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	99.92
KOG0608	1034	consensus Warts/lats-like serine threonine kinases	99.92
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	99.92
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	99.92
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	99.92
KOG1027	903	consensus Serine/threonine protein kinase and endo	99.92
KOG1167	418	consensus Serine/threonine protein kinase of the C	99.92
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	99.92
KOG4236	888	consensus Serine/threonine protein kinase PKC mu/P	99.92
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	99.92
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	99.92
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	99.92
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	99.92
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	99.92
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	99.92
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	99.92
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	99.92
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	99.92
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	99.91
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	99.91
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	99.91
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	99.91
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	99.91
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	99.91
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	99.91
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	99.91
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	99.91
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	99.91
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	99.91
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	99.91
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	99.91
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	99.91
KOG0695	593	consensus Serine/threonine protein kinase [Signal	99.91
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	99.91
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	99.91
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	99.91
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	99.91
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	99.91
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	99.9
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	99.9
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	99.9
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	99.9
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	99.9
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.9
KOG1095	1025	consensus Protein tyrosine kinase [Signal transduc	99.9
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	99.9
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	99.9
PLN03224	507	probable serine/threonine protein kinase; Provisio	99.9
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	99.9
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	99.9
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	99.9
KOG1187	361	consensus Serine/threonine protein kinase [Signal	99.9
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	99.9
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	99.89
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.89
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	99.89
KOG0587	953	consensus Traf2- and Nck-interacting kinase and re	99.88
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.87
KOG1151	775	consensus Tousled-like protein kinase [Signal tran	99.87
KOG4250	732	consensus TANK binding protein kinase TBK1 [Signal	99.87
KOG0196	996	consensus Tyrosine kinase, EPH (ephrin) receptor f	99.87
KOG0200	609	consensus Fibroblast/platelet-derived growth facto	99.86
KOG0984	282	consensus Mitogen-activated protein kinase (MAPK)	99.86
KOG4278	1157	consensus Protein tyrosine kinase [Signal transduc	99.85
KOG0194	474	consensus Protein tyrosine kinase [Signal transduc	99.85
KOG1094	807	consensus Discoidin domain receptor DDR1 [Signal t	99.85
KOG1024	563	consensus Receptor-like protein tyrosine kinase RY	99.85
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.84
KOG4257	974	consensus Focal adhesion tyrosine kinase FAK, cont	99.84
KOG0199	1039	consensus ACK and related non-receptor tyrosine ki	99.83
KOG0576	829	consensus Mitogen-activated protein kinase kinase	99.83
KOG3653	534	consensus Transforming growth factor beta/activin	99.81
KOG1345	378	consensus Serine/threonine kinase [Signal transduc	99.81
KOG2052	513	consensus Activin A type IB receptor, serine/threo	99.79
KOG1152	772	consensus Signal transduction serine/threonine kin	99.77
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	99.76
KOG1025	1177	consensus Epidermal growth factor receptor EGFR an	99.74
KOG0606	1205	consensus Microtubule-associated serine/threonine	99.72
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.71
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	99.66
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	99.65
KOG1240	1431	consensus Protein kinase containing WD40 repeats [	99.6
COG0515	384	SPS1 Serine/threonine protein kinase [General func	99.59
KOG1033	516	consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati	99.55
KOG4158	598	consensus BRPK/PTEN-induced protein kinase [Signal	99.55
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	99.51
KOG1164	322	consensus Casein kinase (serine/threonine/tyrosine	99.43
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.33
KOG1023	484	consensus Natriuretic peptide receptor, guanylate	99.31
PRK12274	218	serine/threonine protein kinase; Provisional	99.24
KOG1163	341	consensus Casein kinase (serine/threonine/tyrosine	99.24
KOG1165	449	consensus Casein kinase (serine/threonine/tyrosine	99.21
PRK09188	365	serine/threonine protein kinase; Provisional	99.17
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	99.13
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	99.09
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	99.05
KOG1166	974	consensus Mitotic checkpoint serine/threonine prot	98.97
KOG0606	1205	consensus Microtubule-associated serine/threonine	98.95
smart00090	237	RIO RIO-like kinase.	98.81
COG4248	637	Uncharacterized protein with protein kinase and he	98.69
KOG2137	700	consensus Protein kinase [Signal transduction mech	98.69
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	98.66
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	98.64
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	98.64
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	98.63
PRK10345	210	hypothetical protein; Provisional	98.58
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	98.55
PRK09605	535	bifunctional UGMP family protein/serine/threonine	98.38
PRK14879	211	serine/threonine protein kinase; Provisional	98.37
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	98.3
KOG1266	458	consensus Protein kinase [Signal transduction mech	98.2
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	98.1
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	97.92
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	97.88
PF06293	206	Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family;	97.76
PRK15123	268	lipopolysaccharide core heptose(I) kinase RfaP; Pr	97.75
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	97.7
KOG1290	590	consensus Serine/threonine protein kinase [Signal	97.34
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	97.31
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	97.3
KOG1243	690	consensus Protein kinase [General function predict	97.21
PF01163	188	RIO1: RIO1 family; InterPro: IPR018934 Protein pho	97.2
KOG3087	229	consensus Serine/threonine protein kinase [General	97.2
PRK09902	216	hypothetical protein; Provisional	96.65
KOG3741	655	consensus Poly(A) ribonuclease subunit [RNA proces	96.51
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	96.48
PF06176	229	WaaY: Lipopolysaccharide core biosynthesis protein	96.34
KOG0576	829	consensus Mitogen-activated protein kinase kinase	96.16
COG0478	304	RIO-like serine/threonine protein kinase fused to	95.71
COG1718	268	RIO1 Serine/threonine protein kinase involved in c	94.74
PF12260	188	PIP49_C: Protein-kinase domain of FAM69; InterPro:	94.58
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	93.22
KOG1093	725	consensus Predicted protein kinase (contains TBC a	92.74
COG0661	517	AarF Predicted unusual protein kinase [General fun	91.67
cd05155	235	APH_ChoK_like_1 Uncharacterized bacterial proteins	91.6
cd05157	235	ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes.	91.37
PF01636	239	APH: Phosphotransferase enzyme family This family	90.93
PRK05231	319	homoserine kinase; Provisional	90.92
COG5072	488	ALK1 Serine/threonine kinase of the haspin family	90.75
TIGR00938	307	thrB_alt homoserine kinase, Neisseria type. Homose	90.3
TIGR02906	313	spore_CotS spore coat protein, CotS family. Member	89.36
cd05156	302	ChoK_euk Choline Kinase (ChoK) in eukaryotes. The	89.31
PRK10271	188	thiK thiamine kinase; Provisional	88.79
KOG1235	538	consensus Predicted unusual protein kinase [Genera	88.22
PF01633	211	Choline_kinase: Choline/ethanolamine kinase; Inter	88.09
cd05150	244	APH Aminoglycoside 3'-phosphotransferase (APH). Th	87.75
COG0510	269	ycfN Thiamine kinase and related kinases [Coenzyme	87.47
cd05153	296	HomoserineK_II Homoserine Kinase, type II. Homoser	87.1
TIGR02172	226	Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou	86.43
COG2334	331	Putative homoserine kinase type II (protein kinase	86.09
PLN02236	344	choline kinase	86.03
TIGR02721	256	ycfN_thiK thiamine kinase. Members of this family	85.73
PF05445	434	Pox_ser-thr_kin: Poxvirus serine/threonine protein	80.96

>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.1e-40  Score=260.76  Aligned_cols=198  Identities=25%  Similarity=0.381  Sum_probs=164.3

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecC-----cCcccCcCCCcccchHHhhh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRAN-----KQFAEEIQTRQYRAPEVILR   77 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~-----~~~~~~~~~~~~~~PE~~~~   77 (237)
                      |++..+..++.|+|+||.|+|+.+++|||+||+|++++.+-.+|++|||+++...     ...+..+.|++|+|||++..
T Consensus       122 L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~n~~c~lKI~DFGLAR~~~~~~~~~~mTeYVaTRWYRAPElll~  201 (359)
T KOG0660|consen  122 LTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLLNADCDLKICDFGLARYLDKFFEDGFMTEYVATRWYRAPELLLN  201 (359)
T ss_pred             ccHHHHHHHHHHHHHhcchhhcccccccccchhheeeccCCCEEeccccceeeccccCcccchhcceeeeeecCHHHHhc
Confidence            7889999999999999999999999999999999999999999999999998763     33467788999999999986


Q ss_pred             c-CCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCC--chhhhcccCccchhcc
Q 026540           78 A-GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQ--SKDYFDRHGDLKRIRR  154 (237)
Q Consensus        78 ~-~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~  154 (237)
                      . .|+...||||+||+++||++|++.|.+.      +...|+..++.++|++++........  ...+...      ...
T Consensus       202 ~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~------d~v~Ql~lI~~~lGtP~~e~l~~i~s~~ar~yi~s------lp~  269 (359)
T KOG0660|consen  202 SSEYTKAIDIWSVGCILAEMLTGKPLFPGK------DYVHQLQLILELLGTPSEEDLQKIRSEKARPYIKS------LPQ  269 (359)
T ss_pred             cccccchhhhhhhhHHHHHHHcCCCCCCCC------chHHHHHHHHHhcCCCCHHHHHHhccHHHHHHHHh------CCC
Confidence            5 5999999999999999999999999988      58899999999999998887653222  2222221      222


Q ss_pred             ccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccCCcccccccc
Q 026540          155 LKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNSTRDETKNKS  219 (237)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~~~~~~~~~~  219 (237)
                      .+..++..+.+       ..++.+++|+.+||.+||.+|+|++|+|+|||+..+.....++....
T Consensus       270 ~p~~~f~~~fp-------~a~p~AidLlekmL~fdP~kRita~eAL~hPYl~~~hdp~dEP~~~~  327 (359)
T KOG0660|consen  270 IPKQPFSSIFP-------NANPLAIDLLEKMLVFDPKKRITAEEALAHPYLAPYHDPEDEPVCQP  327 (359)
T ss_pred             CCCCCHHHHcC-------CCCHHHHHHHHHHhccCccccCCHHHHhcChhhhhhcCCccCCCCCC
Confidence            23333343322       45678899999999999999999999999999999988887774443

>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]

Probab=100.00  E-value=6.1e-40  Score=252.83  Aligned_cols=192  Identities=23%  Similarity=0.340  Sum_probs=155.3

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecC---cCcccCcCCCcccchHHhhh-
Q 026540            2 TIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRAN---KQFAEEIQTRQYRAPEVILR-   77 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~---~~~~~~~~~~~~~~PE~~~~-   77 (237)
                      |+.+..+++++.|++.|++|+|+.+++||||||+|||++.++.+|+||||+|+...   ..++.++.|++|+|||.+.+ 
T Consensus        97 G~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~pgd~YTDYVATRWYRaPELLvGD  176 (396)
T KOG0593|consen   97 GVPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILITQNGVVKLCDFGFARTLSAPGDNYTDYVATRWYRAPELLVGD  176 (396)
T ss_pred             CCCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEEecCCcEEeccchhhHhhcCCcchhhhhhhhhhccChhhhccc
Confidence            67899999999999999999999999999999999999999999999999997554   56778899999999999998 


Q ss_pred             cCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccC
Q 026540           78 AGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKF  157 (237)
Q Consensus        78 ~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (237)
                      .+|+.++|||++||++.||++|.++|.+.      ++.+++..+...+|.+.+....--..+ .+|..- .....+  ..
T Consensus       177 tqYG~pVDiWAiGCv~aEl~~G~pL~PG~------SDiDQLy~I~ktLG~L~prhq~iF~~N-~~F~Gv-~lP~~~--~~  246 (396)
T KOG0593|consen  177 TQYGKPVDIWAIGCVFAELLTGEPLWPGR------SDIDQLYLIRKTLGNLIPRHQSIFSSN-PFFHGV-RLPEPE--HP  246 (396)
T ss_pred             CcCCCcccchhhhHHHHHHhcCCcCCCCc------chHHHHHHHHHHHcccCHHHHHHhccC-Cceeee-ecCCCC--Cc
Confidence            58999999999999999999999999988      599999999999999887765321111 111100 000000  01


Q ss_pred             CchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccC
Q 026540          158 WSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNS  210 (237)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~  210 (237)
                      .++++..       ...+..+.||+..||+.||.+|++.+|+|.|+||.++-.
T Consensus       247 epLe~k~-------p~~s~~~ld~~k~cL~~dP~~R~sc~qll~H~yFd~~~e  292 (396)
T KOG0593|consen  247 EPLERKY-------PKISNVLLDLLKKCLKMDPDDRLSCEQLLHHPYFDGFIE  292 (396)
T ss_pred             cchhhhc-------ccchHHHHHHHHHHhcCCccccccHHHHhcChHHHHHHH
Confidence            1222221       234557889999999999999999999999999987643

>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]

Probab=100.00  E-value=7.5e-39  Score=268.66  Aligned_cols=202  Identities=29%  Similarity=0.417  Sum_probs=166.4

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCC--CcEEEeecCcceecCcCcccCcCCCcccchHHhhhcC
Q 026540            2 TIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGID--MRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAG   79 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~--~~~kl~dfg~~~~~~~~~~~~~~~~~~~~PE~~~~~~   79 (237)
                      ||+-..++.++.||+.+|.+||..+|||+||||+|||+...  -.+||+|||+|+.........+.++.|+|||++.+.+
T Consensus       285 Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~~q~vytYiQSRfYRAPEVILGlp  364 (586)
T KOG0667|consen  285 GLSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKDPKRSRIKVIDFGSSCFESQRVYTYIQSRFYRAPEVILGLP  364 (586)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeeccCCcCceeEEecccccccCCcceeeeeccccccchhhccCC
Confidence            67889999999999999999999999999999999999653  3799999999999888877889999999999999999


Q ss_pred             CCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcc-cCccchhcccc--
Q 026540           80 YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDR-HGDLKRIRRLK--  156 (237)
Q Consensus        80 ~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--  156 (237)
                      |+.+.|||||||+++||++|.++|.+.      ++.+++..|.+++|.+|..+.....+...||.. .+.+.......  
T Consensus       365 Y~~~IDmWSLGCIlAEL~tG~PLfpG~------ne~DQl~~I~e~lG~Pp~~mL~~~~~~~kff~~~~~~~~~~~~~~~~  438 (586)
T KOG0667|consen  365 YDTAIDMWSLGCILAELFTGEPLFPGD------NEYDQLARIIEVLGLPPPKMLDTAKKAHKFFTSLKGFPRLCVETSAP  438 (586)
T ss_pred             CCCccceeehhhhHHhHhcCccccCCC------CHHHHHHHHHHHhCCCCHHHHHhccccceehhccCCceeeeeeeccc
Confidence            999999999999999999999999887      599999999999999999999888888888887 44332111111  


Q ss_pred             -------CCchhHHhhhhc-----------CCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCccc
Q 026540          157 -------FWSLDRLLVDKY-----------RFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRN  209 (237)
Q Consensus       157 -------~~~~~~~~~~~~-----------~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~  209 (237)
                             .+..........           .........|.|||.+||++||.+|+|+.|+|+||||.+..
T Consensus       439 ~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~dP~~R~tp~qal~Hpfl~~~~  509 (586)
T KOG0667|consen  439 RGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEWDPAERITPAQALNHPFLTGTS  509 (586)
T ss_pred             ccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHHhccCchhcCCHHHHhcCccccccc
Confidence                   000000000111           11223457899999999999999999999999999999543

>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]

Probab=100.00  E-value=3.5e-39  Score=254.81  Aligned_cols=168  Identities=27%  Similarity=0.359  Sum_probs=142.2

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhh-hcCCccCCCCCccccCCCCcEEEeecCcceecC-cCcccCcCCCcccchHHhhhcCC
Q 026540            3 IVEKKLKRRAKRAVANISIRRA-SMGGIELPKPERCLDGIDMRCKVVDFGNACRAN-KQFAEEIQTRQYRAPEVILRAGY   80 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~-~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~-~~~~~~~~~~~~~~PE~~~~~~~   80 (237)
                      +.|+...+++++++.||.|+|. .+|+||||||+|||++..|.+||+|||.+.... ......+||..||+||.+.+..|
T Consensus       175 i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS~a~tfvGT~~YMsPERi~g~~Y  254 (364)
T KOG0581|consen  175 IPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLVNSKGEVKICDFGVSGILVNSIANTFVGTSAYMSPERISGESY  254 (364)
T ss_pred             CCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeeeccCCCEEeccccccHHhhhhhcccccccccccChhhhcCCcC
Confidence            7899999999999999999995 999999999999999999999999999986543 45578899999999999999999


Q ss_pred             CchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCch
Q 026540           81 SFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSL  160 (237)
Q Consensus        81 ~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (237)
                      +.++||||||+.++|+..|+.||....    ......++++..+...+|+                              
T Consensus       255 s~~sDIWSLGLsllE~a~GrfP~~~~~----~~~~~~~~Ll~~Iv~~ppP------------------------------  300 (364)
T KOG0581|consen  255 SVKSDIWSLGLSLLELAIGRFPYPPPN----PPYLDIFELLCAIVDEPPP------------------------------  300 (364)
T ss_pred             CcccceecccHHHHHHhhCCCCCCCcC----CCCCCHHHHHHHHhcCCCC------------------------------
Confidence            999999999999999999999997651    1233445555555443332                              


Q ss_pred             hHHhhhhcCCCHH-hHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccCCc
Q 026540          161 DRLLVDKYRFSET-DAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNSTR  212 (237)
Q Consensus       161 ~~~~~~~~~~~~~-~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~~~  212 (237)
                              .++.. ++++|.+|+..||+.||.+|+|++|+++|||++......
T Consensus       301 --------~lP~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~Hpfi~~~~~~~  345 (364)
T KOG0581|consen  301 --------RLPEGEFSPEFRSFVSCCLRKDPSERPSAKQLLQHPFIKKFEDPN  345 (364)
T ss_pred             --------CCCcccCCHHHHHHHHHHhcCCcccCCCHHHHhcCHHHhhccccc
Confidence                    23443 789999999999999999999999999999999765443

>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]

Probab=100.00  E-value=3e-38  Score=239.36  Aligned_cols=186  Identities=24%  Similarity=0.314  Sum_probs=155.7

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC---cccCcCCCcccchHHhhhc-
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ---FAEEIQTRQYRAPEVILRA-   78 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~~~~PE~~~~~-   78 (237)
                      |+..+++.++.+++.|++|+|.+.|.|||+||.|+|++.+|.+|++|||+++.+..+   .+..+.|++|+|||.+++. 
T Consensus        98 l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~~~~~~V~TRWYRAPELLfGsr  177 (318)
T KOG0659|consen   98 LSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNRIQTHQVVTRWYRAPELLFGSR  177 (318)
T ss_pred             cCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEEcCCCcEEeecccchhccCCCCcccccceeeeeccChHHhccch
Confidence            577899999999999999999999999999999999999999999999999876633   3344779999999999987 


Q ss_pred             CCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCC
Q 026540           79 GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFW  158 (237)
Q Consensus        79 ~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (237)
                      .|+..+|+||.||++.|++.|.+.|.+.      .+.+|+..+++.+|++.+..|+......+|......       +..
T Consensus       178 ~Yg~~VDmWavGCI~AELllr~P~fpG~------sDidQL~~If~~LGTP~~~~WP~~~~lpdY~~~~~~-------P~~  244 (318)
T KOG0659|consen  178 QYGTGVDMWAVGCIFAELLLRVPFFPGD------SDIDQLSKIFRALGTPTPDQWPEMTSLPDYVKIQQF-------PKP  244 (318)
T ss_pred             hcCCcchhhhHHHHHHHHHccCCCCCCC------chHHHHHHHHHHcCCCCcccCccccccccHHHHhcC-------CCC
Confidence            5999999999999999999998888877      499999999999999999988877776655432210       000


Q ss_pred             chhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcc
Q 026540          159 SLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLR  208 (237)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~  208 (237)
                      +...       .-...+.++.||+.+||.+||.+|+|+.|+|+|+||+..
T Consensus       245 ~~~~-------lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~~yf~~~  287 (318)
T KOG0659|consen  245 PLNN-------LFPAASSDALDLLSKMLTYNPKKRITASQALKHPYFKSL  287 (318)
T ss_pred             cccc-------ccccccHHHHHHHHhhhccCchhcccHHHHhcchhhhcC
Confidence            0110       122345666899999999999999999999999999953

>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=9e-38  Score=253.27  Aligned_cols=190  Identities=29%  Similarity=0.397  Sum_probs=154.7

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecC--cCcccCcCCCcccchHHhhhc-C
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRAN--KQFAEEIQTRQYRAPEVILRA-G   79 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~--~~~~~~~~~~~~~~PE~~~~~-~   79 (237)
                      ++|..+..|+.||+.||+|+|.+|+.|||+||+|||+..+..+||+|||+|+...  .+++.++.|++|+|||++... .
T Consensus       107 fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi~~~~~iKiaDFGLARev~SkpPYTeYVSTRWYRAPEvLLrs~~  186 (538)
T KOG0661|consen  107 FSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILISGNDVIKIADFGLAREVRSKPPYTEYVSTRWYRAPEVLLRSGY  186 (538)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEecccceeEecccccccccccCCCcchhhhcccccchHHhhhccc
Confidence            6899999999999999999999999999999999999988899999999998755  568888999999999999865 5


Q ss_pred             CCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCc
Q 026540           80 YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWS  159 (237)
Q Consensus        80 ~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (237)
                      |+.+.|+|++||+++|+.+-+++|.+.      ++.+++..|-+++|++...-+.......   ...+  -......-.+
T Consensus       187 Ys~pvD~wA~GcI~aEl~sLrPLFPG~------sE~Dqi~KIc~VLGtP~~~~~~eg~~La---~~mn--f~~P~~~~~~  255 (538)
T KOG0661|consen  187 YSSPVDMWAVGCIMAELYSLRPLFPGA------SEIDQIYKICEVLGTPDKDSWPEGYNLA---SAMN--FRFPQVKPSP  255 (538)
T ss_pred             cCCchHHHHHHHHHHHHHHhcccCCCC------cHHHHHHHHHHHhCCCccccchhHHHHH---HHhc--cCCCcCCCCC
Confidence            899999999999999999999999888      5899999999999998776543321100   0000  0011111122


Q ss_pred             hhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccC
Q 026540          160 LDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNS  210 (237)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~  210 (237)
                      +..++       ...+.++.++|.+||.|||.+||||.|+|+||||.....
T Consensus       256 l~~L~-------p~~s~~~~~li~~ll~WDP~kRpTA~~al~~pffq~~~~  299 (538)
T KOG0661|consen  256 LKDLL-------PNASSEAASLIERLLAWDPDKRPTASQALQHPFFQVGRA  299 (538)
T ss_pred             hHHhC-------cccCHHHHHHHHHHhcCCCccCccHHHHhcCcccccccc
Confidence            33332       236788999999999999999999999999999996543

>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]

Probab=100.00  E-value=7e-38  Score=257.44  Aligned_cols=163  Identities=21%  Similarity=0.262  Sum_probs=142.9

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCc----------------CcccCcCC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK----------------QFAEEIQT   66 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~----------------~~~~~~~~   66 (237)
                      |+|.-++.|+++|+.||.|+|+.||+||||||+|||++.+|+++|.|||.+..+..                ....++||
T Consensus       171 fde~caR~YAAeIldAleylH~~GIIHRDlKPENILLd~dmhikITDFGsAK~l~~~~~~~~~~~~~~~a~s~~~SFVGT  250 (604)
T KOG0592|consen  171 FDETCARFYAAEILDALEYLHSNGIIHRDLKPENILLDKDGHIKITDFGSAKILSPSQKSQENPVDPNQASSRRSSFVGT  250 (604)
T ss_pred             chHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeEcCCCcEEEeeccccccCChhhccccCccCcccccCcccceeee
Confidence            68889999999999999999999999999999999999999999999999865431                11347999


Q ss_pred             CcccchHHhhhcCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhccc
Q 026540           67 RQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRH  146 (237)
Q Consensus        67 ~~~~~PE~~~~~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  146 (237)
                      ..|.+||++.....++.+|+|+|||++|+|+.|++||.+.+      +.-..                            
T Consensus       251 AeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~N------eyliF----------------------------  296 (604)
T KOG0592|consen  251 AEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAAN------EYLIF----------------------------  296 (604)
T ss_pred             ecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCcccc------HHHHH----------------------------
Confidence            99999999999999999999999999999999999998774      33333                            


Q ss_pred             CccchhccccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccCCcc
Q 026540          147 GDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNSTRD  213 (237)
Q Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~~~~  213 (237)
                                    .+++...+.++..+++.+.+|+.++|..||..|+|++||.+||||.++++...
T Consensus       297 --------------qkI~~l~y~fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~HpFF~~Vdw~nl  349 (604)
T KOG0592|consen  297 --------------QKIQALDYEFPEGFPEDARDLIKKLLVRDPSDRLTSQQIKAHPFFEGVDWENL  349 (604)
T ss_pred             --------------HHHHHhcccCCCCCCHHHHHHHHHHHccCccccccHHHHhhCcccccCChhhh
Confidence                          33444466778888999999999999999999999999999999999887653

>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]

Probab=100.00  E-value=1.1e-37  Score=245.61  Aligned_cols=193  Identities=27%  Similarity=0.343  Sum_probs=158.3

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecC---cCcccCcCCCcccchHHhhhc
Q 026540            2 TIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRAN---KQFAEEIQTRQYRAPEVILRA   78 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~---~~~~~~~~~~~~~~PE~~~~~   78 (237)
                      |+....++.++.|++.|++|||+++|.||||||+||||+.+|.+||+|||+++...   ..++..+.|.+|+|||++.+.
T Consensus       116 g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi~~~G~lKlaDFGlAra~~ip~~~yt~evvTlWYRaPEvLlGs  195 (323)
T KOG0594|consen  116 GLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLISSSGVLKLADFGLARAFSIPMRTYTPEVVTLWYRAPEVLLGS  195 (323)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEECCCCcEeeeccchHHHhcCCcccccccEEEeeccCHHHhcCC
Confidence            46667899999999999999999999999999999999999999999999997544   446777889999999999987


Q ss_pred             -CCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccC
Q 026540           79 -GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKF  157 (237)
Q Consensus        79 -~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (237)
                       .|+...|+||+||+++||++++.+|.+..      +.+++..+.+++|++....|+......++-.....+...     
T Consensus       196 ~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~s------e~~ql~~If~~lGtP~e~~Wp~v~~~~~~k~~f~~~~~~-----  264 (323)
T KOG0594|consen  196 TSYSTSVDIWSLGCIFAEMFTRRPLFPGDS------EIDQLFRIFRLLGTPNEKDWPGVSSLPDYKAPFPKWPGP-----  264 (323)
T ss_pred             CcCCCCcchHhHHHHHHHHHhCCCCCCCCc------HHHHHHHHHHHcCCCCccCCCCccccccccccCcCCCCc-----
Confidence             68999999999999999999999999884      799999999999999998887766554443322221100     


Q ss_pred             CchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccCCc
Q 026540          158 WSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNSTR  212 (237)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~~~  212 (237)
                      .++....       ........+++.+||+++|.+|.|++.+|+||||.....+.
T Consensus       265 ~~l~~~~-------~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h~yf~~~~~~~  312 (323)
T KOG0594|consen  265 KDLSSIL-------PKLDPDGIELLSKLLQYDPAKRISAKGALTHPYFSELPEKS  312 (323)
T ss_pred             cchHHhc-------cccCccHHHHHHHHhccCcccCcCHHHHhcChhhcccccch
Confidence            0111111       11125788999999999999999999999999999775443

>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]

Probab=100.00  E-value=2.7e-37  Score=240.99  Aligned_cols=189  Identities=25%  Similarity=0.282  Sum_probs=157.8

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC---cccCcCCCcccchHHhhhcC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ---FAEEIQTRQYRAPEVILRAG   79 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~~~~PE~~~~~~   79 (237)
                      +.+.+++-++.|+|+|+.|+|...|.|||||++|+|++..|.+||+|||+|+.++.+   ++..+-|.+|+|||.+.+..
T Consensus       174 F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp~k~~T~lVVTLWYRaPELLLG~~  253 (419)
T KOG0663|consen  174 FLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLLSHKGILKIADFGLAREYGSPLKPYTPLVVTLWYRAPELLLGAK  253 (419)
T ss_pred             CchHHHHHHHHHHHHHHHHHhhceeEecccchhheeeccCCcEEecccchhhhhcCCcccCcceEEEeeecCHHHhcCCc
Confidence            567888999999999999999999999999999999999999999999999988866   67778899999999999885


Q ss_pred             -CCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhh-cccCccchhccccC
Q 026540           80 -YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYF-DRHGDLKRIRRLKF  157 (237)
Q Consensus        80 -~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~  157 (237)
                       |+.+.|+||+||++.+++.+.+.|.+.      .+.+++.++++.+|++.+..|++......+- ...      .....
T Consensus       254 tyst~iDMWSvGCI~aE~l~~kPlf~G~------sE~dQl~~If~llGtPte~iwpg~~~lp~~k~~~f------~~~py  321 (419)
T KOG0663|consen  254 TYSTAVDMWSVGCIFAELLTQKPLFPGK------SEIDQLDKIFKLLGTPSEAIWPGYSELPAVKKMTF------SEHPY  321 (419)
T ss_pred             ccCcchhhhhHHHHHHHHHhcCCCCCCC------chHHHHHHHHHHhCCCccccCCCccccchhhcccc------CCCCc
Confidence             999999999999999999999999988      4889999999999999999988766554331 111      11111


Q ss_pred             CchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcc
Q 026540          158 WSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLR  208 (237)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~  208 (237)
                      .++.+...    .. ..++...+|+..+|.+||.+|.||+|+|+|.||...
T Consensus       322 n~lr~kF~----~~-~lse~g~~Lln~llt~dP~kR~tA~~~L~h~~F~e~  367 (419)
T KOG0663|consen  322 NNLRKKFG----AL-SLSEQGFDLLNKLLTYDPGKRITAEDGLKHEYFRET  367 (419)
T ss_pred             hhhhhhcc----cc-ccchhHHHHHHHHhccCccccccHHHhhcccccccC
Confidence            11221111    11 156788899999999999999999999999999973

>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=3.6e-37  Score=251.34  Aligned_cols=187  Identities=22%  Similarity=0.270  Sum_probs=155.6

Q ss_pred             ChhhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecC----cCcccCcCCCcccchHHhh
Q 026540            1 MTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRAN----KQFAEEIQTRQYRAPEVIL   76 (237)
Q Consensus         1 ~~~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~----~~~~~~~~~~~~~~PE~~~   76 (237)
                      +.|+|.+++-+|+|+++||+|+|+.++.|||||.+||||+.+|.+||+|||+++.+.    ..++..+-|.+|++||++.
T Consensus       213 vkft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~~~~~~T~rVvTLWYRpPELLL  292 (560)
T KOG0600|consen  213 VKFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILIDNNGVLKIADFGLARFYTPSGSAPYTSRVVTLWYRPPELLL  292 (560)
T ss_pred             cccChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEEcCCCCEEeccccceeeccCCCCcccccceEEeeccChHHhc
Confidence            468999999999999999999999999999999999999999999999999998655    2466778899999999999


Q ss_pred             hc-CCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccc
Q 026540           77 RA-GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRL  155 (237)
Q Consensus        77 ~~-~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (237)
                      +. .|+..+|+||+||++.||+.|++.|.+.+      +.+|+..|+++.|.+.+..|. ..+.. ++....        
T Consensus       293 G~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~t------EveQl~kIfklcGSP~e~~W~-~~kLP-~~~~~k--------  356 (560)
T KOG0600|consen  293 GATSYGTAVDLWSVGCILAELFLGKPILQGRT------EVEQLHKIFKLCGSPTEDYWP-VSKLP-HATIFK--------  356 (560)
T ss_pred             CCcccccceeehhhhHHHHHHHcCCCCcCCcc------HHHHHHHHHHHhCCCChhccc-cccCC-cccccC--------
Confidence            87 59999999999999999999999999985      999999999999999998876 22221 111111        


Q ss_pred             cCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcC
Q 026540          156 KFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLS  206 (237)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~  206 (237)
                      ...+..+.+.+.   -..++...++|+..||.+||.+|.||.++|+|+||.
T Consensus       357 p~~~y~r~l~E~---~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~seyF~  404 (560)
T KOG0600|consen  357 PQQPYKRRLRET---FKDFPASALDLLEKLLSLDPDKRGTASSALQSEYFT  404 (560)
T ss_pred             CCCcccchHHHH---hccCCHHHHHHHHHHhccCccccccHHHHhcCcccc
Confidence            111122222222   234567888999999999999999999999999994

>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=1.6e-37  Score=247.97  Aligned_cols=161  Identities=26%  Similarity=0.333  Sum_probs=130.9

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCC---CcEEEeecCcceecC--cCcccCcCCCcccchHHhhh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGID---MRCKVVDFGNACRAN--KQFAEEIQTRQYRAPEVILR   77 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~---~~~kl~dfg~~~~~~--~~~~~~~~~~~~~~PE~~~~   77 (237)
                      +.|...+.+++|++.|+.|||+.||+||||||+|||+..+   -.+||+|||+|...+  ....+.+||+.|.|||++..
T Consensus       273 l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~~e~~llKItDFGlAK~~g~~sfm~TlCGTpsYvAPEVl~~  352 (475)
T KOG0615|consen  273 LREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLSNDAEDCLLKITDFGLAKVSGEGSFMKTLCGTPSYVAPEVLAS  352 (475)
T ss_pred             cccchhHHHHHHHHHHHHHHHHcCcccccCCcceEEeccCCcceEEEecccchhhccccceehhhhcCCccccChhheec
Confidence            4577789999999999999999999999999999999876   688999999997764  34567899999999999997


Q ss_pred             cC---CCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcc
Q 026540           78 AG---YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRR  154 (237)
Q Consensus        78 ~~---~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (237)
                      .+   ++.++|+||+||++|-+++|.+||.......     ...+.+                                 
T Consensus       353 kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~-----sl~eQI---------------------------------  394 (475)
T KOG0615|consen  353 KGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDP-----SLKEQI---------------------------------  394 (475)
T ss_pred             CCeecccchheeeeccceEEEEeccCCCcccccCCc-----cHHHHH---------------------------------
Confidence            75   3457899999999999999999998664221     111111                                 


Q ss_pred             ccCCchhHHhhhhc----CCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccC
Q 026540          155 LKFWSLDRLLVDKY----RFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNS  210 (237)
Q Consensus       155 ~~~~~~~~~~~~~~----~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~  210 (237)
                               ....+    .....++.+.++||.+||..||++|||+.|+|+||||+...+
T Consensus       395 ---------~~G~y~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~hpW~~~~~~  445 (475)
T KOG0615|consen  395 ---------LKGRYAFGPLQWDRISEEALDLINWMLVVDPENRPSADEALNHPWFKDAPC  445 (475)
T ss_pred             ---------hcCcccccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcChhhhcccc
Confidence                     11111    123456889999999999999999999999999999996543

>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=6.7e-37  Score=256.74  Aligned_cols=165  Identities=25%  Similarity=0.344  Sum_probs=146.4

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCccee--cCcCcccCcCCCcccchHHhhhcC
Q 026540            2 TIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACR--ANKQFAEEIQTRQYRAPEVILRAG   79 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~--~~~~~~~~~~~~~~~~PE~~~~~~   79 (237)
                      .|.|.+|++++.||+.|+.|+|..||.|||+||+|+|++....+||+|||.|..  .+......+|+++|.+||++.+.+
T Consensus       108 ~l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlLLd~~~nIKIADFGMAsLe~~gklLeTSCGSPHYA~PEIV~G~p  187 (786)
T KOG0588|consen  108 PLPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLLLDVKNNIKIADFGMASLEVPGKLLETSCGSPHYAAPEIVSGRP  187 (786)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhhhhcccCEeeeccceeecccCCccccccCCCcccCCchhhcCCC
Confidence            478999999999999999999999999999999999999998899999999854  345667789999999999999999


Q ss_pred             C-CchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCC
Q 026540           80 Y-SFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFW  158 (237)
Q Consensus        80 ~-~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (237)
                      | +.++||||+|++++.+++|..||.+.+       ...+                                        
T Consensus       188 YdG~~sDVWSCGVILfALLtG~LPFdDdN-------ir~L----------------------------------------  220 (786)
T KOG0588|consen  188 YDGRPSDVWSCGVILFALLTGKLPFDDDN-------IRVL----------------------------------------  220 (786)
T ss_pred             CCCCccccchhHHHHHHHHhCCCCCCCcc-------HHHH----------------------------------------
Confidence            8 788999999999999999999998653       1111                                        


Q ss_pred             chhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccCCccc
Q 026540          159 SLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNSTRDE  214 (237)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~~~~~  214 (237)
                       +.+...+.+++|.+++.++.+||.+||..||++|+|.+||++|||+.+....+..
T Consensus       221 -LlKV~~G~f~MPs~Is~eaQdLLr~ml~VDp~~RiT~~eI~kHP~l~g~~~~~~~  275 (786)
T KOG0588|consen  221 -LLKVQRGVFEMPSNISSEAQDLLRRMLDVDPSTRITTEEILKHPFLSGYTSLPSS  275 (786)
T ss_pred             -HHHHHcCcccCCCcCCHHHHHHHHHHhccCccccccHHHHhhCchhhcCCCCChh
Confidence             5566677889999999999999999999999999999999999999987665443

>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=7.9e-37  Score=254.43  Aligned_cols=158  Identities=23%  Similarity=0.379  Sum_probs=140.9

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecC---cCcccCcCCCcccchHHhhhcC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRAN---KQFAEEIQTRQYRAPEVILRAG   79 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~---~~~~~~~~~~~~~~PE~~~~~~   79 (237)
                      |+|.+|+.|++||++|+.|+|+.+|+|||||..|++++.+..+||+|||+|....   ++..+.+||+-|.|||++...+
T Consensus       115 ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~~Erk~TlCGTPNYIAPEVl~k~g  194 (592)
T KOG0575|consen  115 LTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYDGERKKTLCGTPNYIAPEVLNKSG  194 (592)
T ss_pred             CCcHHHHHHHHHHHHHHHHHHhcCceecccchhheeecCcCcEEecccceeeeecCcccccceecCCCcccChhHhccCC
Confidence            6899999999999999999999999999999999999999999999999997654   5566789999999999999889


Q ss_pred             CCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCc
Q 026540           80 YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWS  159 (237)
Q Consensus        80 ~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (237)
                      ++..+||||+||++|.++.|++||....          +..+                                      
T Consensus       195 HsfEvDiWSlGcvmYtLL~G~PPFetk~----------vket--------------------------------------  226 (592)
T KOG0575|consen  195 HSFEVDIWSLGCVMYTLLVGRPPFETKT----------VKET--------------------------------------  226 (592)
T ss_pred             CCCchhhhhhhhHHHhhhhCCCCcccch----------HHHH--------------------------------------
Confidence            9999999999999999999999997653          1111                                      


Q ss_pred             hhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcc
Q 026540          160 LDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLR  208 (237)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~  208 (237)
                      +.++....+.+|..++.++.+||.+||+.||.+|||++++|.|+||+..
T Consensus       227 y~~Ik~~~Y~~P~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h~Ff~~g  275 (592)
T KOG0575|consen  227 YNKIKLNEYSMPSHLSAEAKDLIRKLLRPNPSERPSLDEVLDHPFFKSG  275 (592)
T ss_pred             HHHHHhcCcccccccCHHHHHHHHHHhcCCcccCCCHHHHhcCHhhhCC
Confidence            3444555677888899999999999999999999999999999999533

>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]

Probab=100.00  E-value=1.1e-36  Score=232.17  Aligned_cols=160  Identities=29%  Similarity=0.416  Sum_probs=133.5

Q ss_pred             ChhhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecC--cCcccCcCCCcccchHHhhhc
Q 026540            1 MTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRAN--KQFAEEIQTRQYRAPEVILRA   78 (237)
Q Consensus         1 ~~~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~--~~~~~~~~~~~~~~PE~~~~~   78 (237)
                      |+++|++++++|+|+++|+.|+|..+|+|||+||+|||++.+..++|+|||+++...  +.....+||++|+|||.+.+.
T Consensus       118 VtlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENILlddn~~i~isDFGFa~~l~~GekLrelCGTPgYLAPEtikC~  197 (411)
T KOG0599|consen  118 VTLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENILLDDNMNIKISDFGFACQLEPGEKLRELCGTPGYLAPETIKCS  197 (411)
T ss_pred             eeecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhheeeccccceEEeccceeeccCCchhHHHhcCCCcccChhheeee
Confidence            689999999999999999999999999999999999999999999999999997643  556678999999999998743


Q ss_pred             ------CCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchh
Q 026540           79 ------GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRI  152 (237)
Q Consensus        79 ------~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (237)
                            +|+..+|+|++|++++.++.|.+||-..         .++. |++.+                           
T Consensus       198 m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHR---------kQml-MLR~I---------------------------  240 (411)
T KOG0599|consen  198 MYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHR---------KQML-MLRMI---------------------------  240 (411)
T ss_pred             cccCCCCccchhhHHHHHHHHHHHHcCCCchhHH---------HHHH-HHHHH---------------------------
Confidence                  5889999999999999999999999643         2222 22221                           


Q ss_pred             ccccCCchhHHhhhhcC----CCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcc
Q 026540          153 RRLKFWSLDRLLVDKYR----FSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLR  208 (237)
Q Consensus       153 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~  208 (237)
                                 +...++    .....+.+..|||.+||+.||.+|+|++|+|+||||.+.
T Consensus       241 -----------meGkyqF~speWadis~~~KdLIsrlLqVdp~~Ritake~LaHpff~q~  289 (411)
T KOG0599|consen  241 -----------MEGKYQFRSPEWADISATVKDLISRLLQVDPTKRITAKEALAHPFFIQI  289 (411)
T ss_pred             -----------HhcccccCCcchhhccccHHHHHHHHHeeCchhcccHHHHhcChHHHHH
Confidence                       111111    133457788999999999999999999999999999655

>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]

Probab=100.00  E-value=1.9e-36  Score=238.89  Aligned_cols=189  Identities=25%  Similarity=0.337  Sum_probs=152.3

Q ss_pred             hHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCC-CcEEEeecCcceecC--cCcccCcCCCcccchHHhhhc-C
Q 026540            4 VEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGID-MRCKVVDFGNACRAN--KQFAEEIQTRQYRAPEVILRA-G   79 (237)
Q Consensus         4 ~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~-~~~kl~dfg~~~~~~--~~~~~~~~~~~~~~PE~~~~~-~   79 (237)
                      ..-.++-+..|+++||.|+|+.+|.||||||+|+|+|.+ |.+||||||+|....  ++......+++|+|||.+.+. .
T Consensus       123 p~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L~~~epniSYicSRyYRaPELifga~~  202 (364)
T KOG0658|consen  123 PLLEIKLYTYQLFRGLAYLHSHGICHRDIKPQNLLVDPDTGVLKICDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE  202 (364)
T ss_pred             ceeeeHHHHHHHHHHHHHHHhcCcccCCCChheEEEcCCCCeEEeccCCcceeeccCCCceeEEEeccccCHHHHcCccc
Confidence            344577899999999999999999999999999999986 999999999997644  344456779999999999987 5


Q ss_pred             CCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCc
Q 026540           80 YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWS  159 (237)
Q Consensus        80 ~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (237)
                      |+.+.|+||.||+++||+.|++.|.+.      +..+|+..+.+++|.+...-+........-+   .    .......+
T Consensus       203 Yt~~IDiWSaGCV~aELl~g~plFpG~------s~~dQL~eIik~lG~Pt~e~I~~mn~~y~~~---~----~p~ik~~~  269 (364)
T KOG0658|consen  203 YTTSIDIWSAGCVMAELLKGQPLFPGD------SSVDQLVEIIKVLGTPTREDIKSMNPNYTEF---K----FPQIKAHP  269 (364)
T ss_pred             cCceeEEhhhhHHHHHHhcCCcccCCC------CHHHHHHHHHHHhCCCCHHHHhhcCcccccc---c----Cccccccc
Confidence            999999999999999999999999987      5899999999999999988776544432100   0    00000111


Q ss_pred             hhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccCC
Q 026540          160 LDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNST  211 (237)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~~  211 (237)
                      ..+      .+....+++..+|+.++|.++|.+|.++.|++.||||......
T Consensus       270 ~~~------~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h~fFdelr~~  315 (364)
T KOG0658|consen  270 WHK------VFFKRLPPDALDLLSKLLQYSPSKRLSALEALAHPFFDELRDP  315 (364)
T ss_pred             cee------ecccCCCHHHHHHHHHHhccChhhcCCHHHHhcchhhHHhhCc
Confidence            111      1234457788899999999999999999999999999977554

>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]

Probab=100.00  E-value=3.7e-36  Score=238.09  Aligned_cols=199  Identities=26%  Similarity=0.433  Sum_probs=156.9

Q ss_pred             hHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCC--------------------CCcEEEeecCcceecCcCcccC
Q 026540            4 VEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGI--------------------DMRCKVVDFGNACRANKQFAEE   63 (237)
Q Consensus         4 ~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~--------------------~~~~kl~dfg~~~~~~~~~~~~   63 (237)
                      .-.+++.++.|++.++.++|...++|.||||+|||+.+                    +..++++|||++....+..+..
T Consensus       190 pi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPENILfvss~~~~~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e~hs~i  269 (415)
T KOG0671|consen  190 PIDHIRHMGYQLLESVAFLHDLKLTHTDLKPENILFVSSEYFKTYNPKKKVCFIRPLKSTAIKVIDFGSATFDHEHHSTI  269 (415)
T ss_pred             chHHHHHHHHHHHHHHHHHHhcceeecCCChheEEEeccceEEEeccCCccceeccCCCcceEEEecCCcceeccCccee
Confidence            45788999999999999999999999999999999821                    2357999999998777777788


Q ss_pred             cCCCcccchHHhhhcCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhh
Q 026540           64 IQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYF  143 (237)
Q Consensus        64 ~~~~~~~~PE~~~~~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  143 (237)
                      +.|+.|+|||++.+-+|+.++|+||+||++.|+.+|..+|...      ++.+++++|.+++|++|..+..... ...+|
T Consensus       270 VsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtH------en~EHLaMMerIlGp~P~~mi~r~~-~~Kyf  342 (415)
T KOG0671|consen  270 VSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTH------ENLEHLAMMERILGPIPSRMIKKTR-KEKYF  342 (415)
T ss_pred             eeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccC------CcHHHHHHHHHhhCCCcHHHhhhhh-hHhhh
Confidence            9999999999999999999999999999999999999999876      5889999999999998888876553 33444


Q ss_pred             cccCc-cchhccc----cCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCccc
Q 026540          144 DRHGD-LKRIRRL----KFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRN  209 (237)
Q Consensus       144 ~~~~~-~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~  209 (237)
                      ....- |.+....    ..+...+.+.......+....+++||+.+||.+||.+|+|+.|+|+||||+...
T Consensus       343 ~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~RiTl~EAL~HpFF~~~~  413 (415)
T KOG0671|consen  343 RRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARRITLREALSHPFFARLT  413 (415)
T ss_pred             hcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCccccccHHHHhcCHHhhcCC
Confidence            43321 1111000    001111111112233455567899999999999999999999999999999754

>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]

Probab=100.00  E-value=1.1e-35  Score=234.79  Aligned_cols=167  Identities=24%  Similarity=0.287  Sum_probs=138.9

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceec---CcCcccCcCCCcccchHHhhhc
Q 026540            2 TIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRA---NKQFAEEIQTRQYRAPEVILRA   78 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~---~~~~~~~~~~~~~~~PE~~~~~   78 (237)
                      -++|..++-++.+|+.||.|||+.+|+|||+||+|||++..|+++|+|||++...   +......+||+.|+|||++.+.
T Consensus       121 ~F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~~~~~~t~tfcGT~eYmAPEil~~~  200 (357)
T KOG0598|consen  121 RFSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILLDEQGHIKLTDFGLCKEDLKDGDATRTFCGTPEYMAPEILLGK  200 (357)
T ss_pred             CcchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeeecCCCcEEEeccccchhcccCCCccccccCCccccChHHHhcC
Confidence            3689999999999999999999999999999999999999999999999998632   2344567999999999999999


Q ss_pred             CCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCC
Q 026540           79 GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFW  158 (237)
Q Consensus        79 ~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (237)
                      +|+..+|.||+|+++|+|++|.+||.+.+      .....                                        
T Consensus       201 gy~~~vDWWsLGillYeML~G~pPF~~~~------~~~~~----------------------------------------  234 (357)
T KOG0598|consen  201 GYDKAVDWWSLGILLYEMLTGKPPFYAED------VKKMY----------------------------------------  234 (357)
T ss_pred             CCCcccchHhHHHHHHHHhhCCCCCcCcc------HHHHH----------------------------------------
Confidence            99999999999999999999999998763      11111                                        


Q ss_pred             chhHHhhhhcCC-CHHhHHHHHHHHHhccccCCCCCC----CHHHHhcCCCcCcccCCccccc
Q 026540          159 SLDRLLVDKYRF-SETDAREFAEFLVPLLDFTPEKRP----TAQQCLQHPWLSLRNSTRDETK  216 (237)
Q Consensus       159 ~~~~~~~~~~~~-~~~~~~~~~~li~~~L~~dP~~R~----t~~ell~hp~f~~~~~~~~~~~  216 (237)
                        .++....... +.-.+.++++++.++|+.||++|+    .++++-.||||.+.++.....+
T Consensus       235 --~~I~~~k~~~~p~~ls~~ardll~~LL~rdp~~RLg~~~d~~~ik~HpfF~~inW~~l~~k  295 (357)
T KOG0598|consen  235 --DKILKGKLPLPPGYLSEEARDLLKKLLKRDPRQRLGGPGDAEEIKRHPFFKGINWEKLLAK  295 (357)
T ss_pred             --HHHhcCcCCCCCccCCHHHHHHHHHHhccCHHHhcCCCCChHHhhcCcccccCCHHHHHhc
Confidence              1122222222 233678999999999999999996    6889999999999988766433

>PTZ00284 protein kinase; Provisional

Probab=100.00  E-value=1.8e-34  Score=247.55  Aligned_cols=198  Identities=24%  Similarity=0.414  Sum_probs=147.5

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhh-hcCCccCCCCCccccCCCC----------------cEEEeecCcceecCcCcccCcC
Q 026540            3 IVEKKLKRRAKRAVANISIRRA-SMGGIELPKPERCLDGIDM----------------RCKVVDFGNACRANKQFAEEIQ   65 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~-~~~~h~d~kp~Nili~~~~----------------~~kl~dfg~~~~~~~~~~~~~~   65 (237)
                      +++.++..++.|++.||.|+|. .+++||||||+|||++.++                .+||+|||.+..........+|
T Consensus       228 l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~~~~~~~~vkl~DfG~~~~~~~~~~~~~g  307 (467)
T PTZ00284        228 FSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVVDPVTNRALPPDPCRVRICDLGGCCDERHSRTAIVS  307 (467)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCcccccccccccCCCCceEEECCCCccccCccccccccC
Confidence            5678899999999999999998 5999999999999998765                4999999988655545556688


Q ss_pred             CCcccchHHhhhcCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCC--chhhh
Q 026540           66 TRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQ--SKDYF  143 (237)
Q Consensus        66 ~~~~~~PE~~~~~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~  143 (237)
                      ++.|+|||++.+..++.++|+||+||++|+|++|+.||.+.      ...+.+..+.+.+|.+|..+......  ...++
T Consensus       308 t~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~------~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~  381 (467)
T PTZ00284        308 TRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTH------DNLEHLHLMEKTLGRLPSEWAGRCGTEEARLLY  381 (467)
T ss_pred             CccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCC------ChHHHHHHHHHHcCCCCHHHHhhccchhHHHHh
Confidence            99999999999999999999999999999999999999766      46788888999999998877643211  12222


Q ss_pred             cccCccchhccccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcc
Q 026540          144 DRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLR  208 (237)
Q Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~  208 (237)
                      ...+......  ......................+.+||.+||++||.+|||++|+|+||||...
T Consensus       382 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~L~Hp~~~~~  444 (467)
T PTZ00284        382 NSAGQLRPCT--DPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQMTTHPYVLKY  444 (467)
T ss_pred             hhcccccccC--CHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHHHHhcCcccccc
Confidence            2222111000  00000000000000001124668899999999999999999999999999965

>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=9.6e-35  Score=240.20  Aligned_cols=159  Identities=25%  Similarity=0.346  Sum_probs=134.8

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCc---CcccCcCCCcccchHHhhhcC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK---QFAEEIQTRQYRAPEVILRAG   79 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~---~~~~~~~~~~~~~PE~~~~~~   79 (237)
                      ++|.+++.++++++.||+|||..+|+|||||.+|||++.+|.+||+|||++.....   .....+||++|||||+.....
T Consensus       366 ~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~KR~TmVGTPYWMAPEVvtrk~  445 (550)
T KOG0578|consen  366 MTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQSKRSTMVGTPYWMAPEVVTRKP  445 (550)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEeccCCcEEEeeeeeeeccccccCccccccCCCCccchhhhhhcc
Confidence            67999999999999999999999999999999999999999999999999865543   345679999999999999999


Q ss_pred             CCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCc
Q 026540           80 YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWS  159 (237)
Q Consensus        80 ~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (237)
                      |++++||||||++..||+.|.+||...+      ....+.+|.. .|++                               
T Consensus       446 YG~KVDIWSLGIMaIEMveGEPPYlnE~------PlrAlyLIa~-ng~P-------------------------------  487 (550)
T KOG0578|consen  446 YGPKVDIWSLGIMAIEMVEGEPPYLNEN------PLRALYLIAT-NGTP-------------------------------  487 (550)
T ss_pred             cCccccchhhhhHHHHHhcCCCCccCCC------hHHHHHHHhh-cCCC-------------------------------
Confidence            9999999999999999999999997542      2223322211 1111                               


Q ss_pred             hhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcC
Q 026540          160 LDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLS  206 (237)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~  206 (237)
                             ....++..+..+.+|+.+||+.|+.+|++|.|||+||||+
T Consensus       488 -------~lk~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~HpFl~  527 (550)
T KOG0578|consen  488 -------KLKNPEKLSPELKDFLDRCLVVDVEQRASAKELLEHPFLK  527 (550)
T ss_pred             -------CcCCccccCHHHHHHHHHHhhcchhcCCCHHHHhcChhhh
Confidence                   2234566789999999999999999999999999999995

>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]

Probab=100.00  E-value=3.4e-35  Score=225.85  Aligned_cols=166  Identities=23%  Similarity=0.275  Sum_probs=148.1

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcCcccCcCCCcccchHHhhhcCCCc
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSF   82 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~   82 (237)
                      ++|+.|+-+++|++.||.|+|+.+|++||+||+|||+|.+|.+||.|||.+..........+||+.|+|||++...+++.
T Consensus       141 F~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~rT~TlCGTPeYLAPEii~sk~ynk  220 (355)
T KOG0616|consen  141 FSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLLDQNGHIKITDFGFAKRVSGRTWTLCGTPEYLAPEIIQSKGYNK  220 (355)
T ss_pred             CCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeeeccCCcEEEEeccceEEecCcEEEecCCccccChHHhhcCCCCc
Confidence            68999999999999999999999999999999999999999999999999998888877889999999999999999999


Q ss_pred             hhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCchhH
Q 026540           83 SVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDR  162 (237)
Q Consensus        83 ~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (237)
                      ++|.|++|+++|||+.|.+||.+.+      ....                                          .++
T Consensus       221 avDWWalGVLIYEMlaG~pPF~~~~------~~~i------------------------------------------Y~K  252 (355)
T KOG0616|consen  221 AVDWWALGVLIYEMLAGYPPFYDDN------PIQI------------------------------------------YEK  252 (355)
T ss_pred             chhHHHHHHHHHHHHcCCCCCcCCC------hHHH------------------------------------------HHH
Confidence            9999999999999999999998764      1111                                          345


Q ss_pred             HhhhhcCCCHHhHHHHHHHHHhccccCCCCCC-----CHHHHhcCCCcCcccCCccccc
Q 026540          163 LLVDKYRFSETDAREFAEFLVPLLDFTPEKRP-----TAQQCLQHPWLSLRNSTRDETK  216 (237)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~-----t~~ell~hp~f~~~~~~~~~~~  216 (237)
                      ++.....+|.-++.++.+|+.++|+.|-.+|.     ...++..||||++.++.....+
T Consensus       253 I~~~~v~fP~~fs~~~kdLl~~LL~vD~t~R~gnlknG~~dIk~H~wF~~v~W~~i~~r  311 (355)
T KOG0616|consen  253 ILEGKVKFPSYFSSDAKDLLKKLLQVDLTKRFGNLKNGVEDIKNHPWFKGVDWEAILQR  311 (355)
T ss_pred             HHhCcccCCcccCHHHHHHHHHHHhhhhHhhhcCcCCCccccccCcccccccHHHHhhc
Confidence            56667778888899999999999999999994     4778999999998887655443

>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=100.00  E-value=2.5e-34  Score=216.21  Aligned_cols=164  Identities=23%  Similarity=0.292  Sum_probs=134.3

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCC---CCcEEEeecCcceecCc--CcccCcCCCcccchHHhhh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGI---DMRCKVVDFGNACRANK--QFAEEIQTRQYRAPEVILR   77 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~---~~~~kl~dfg~~~~~~~--~~~~~~~~~~~~~PE~~~~   77 (237)
                      .+|..+..+++|||++|.|+|..+|+|||+||+|.++.+   ..-+|++|||++...+.  -...++|++.|++||++..
T Consensus       107 ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~g~~~~G~~GtP~fmaPEvvrk  186 (355)
T KOG0033|consen  107 YSEADASHCIQQILEALAYCHSNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVNDGEAWHGFAGTPGYLSPEVLKK  186 (355)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeeeeccCCCceeecccceEEEeCCccccccccCCCcccCHHHhhc
Confidence            578899999999999999999999999999999999954   45789999999977663  2446789999999999999


Q ss_pred             cCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccC
Q 026540           78 AGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKF  157 (237)
Q Consensus        78 ~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (237)
                      .+|+.++|+|+.|++++-++.|++||.+.+      ..+..+.+...-..++                            
T Consensus       187 dpy~kpvDiW~cGViLfiLL~G~~PF~~~~------~~rlye~I~~g~yd~~----------------------------  232 (355)
T KOG0033|consen  187 DPYSKPVDIWACGVILYILLVGYPPFWDED------QHRLYEQIKAGAYDYP----------------------------  232 (355)
T ss_pred             CCCCCcchhhhhhHHHHHHHhCCCCCCCcc------HHHHHHHHhccccCCC----------------------------
Confidence            999999999999999999999999998753      3333333322111111                            


Q ss_pred             CchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccC
Q 026540          158 WSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNS  210 (237)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~  210 (237)
                                .+..+..++++.+|+++||..||++|+|++|+|+|||+.+.+.
T Consensus       233 ----------~~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~HpWi~~r~~  275 (355)
T KOG0033|consen  233 ----------SPEWDTVTPEAKSLIRRMLTVNPKKRITADEALKHPWICNRER  275 (355)
T ss_pred             ----------CcccCcCCHHHHHHHHHHhccChhhhccHHHHhCCchhcchHH
Confidence                      1123456788999999999999999999999999999987643

>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.9e-34  Score=232.51  Aligned_cols=171  Identities=26%  Similarity=0.380  Sum_probs=134.8

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecC-------cCcccCcCCCcccchHH
Q 026540            2 TIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRAN-------KQFAEEIQTRQYRAPEV   74 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~-------~~~~~~~~~~~~~~PE~   74 (237)
                      ||+|.-++.+++++|+||.|+|..|.+|||+|+.||||+.+|.+||+|||.+..+.       ......+|+++|++||+
T Consensus       122 Gl~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G~R~~~rf~tfvgtp~wmAPEv  201 (516)
T KOG0582|consen  122 GLEEASIATILREVLKALDYLHQNGHIHRDVKAGNILIDSDGTVKLADFGVSASLFDSGDRQVTRFNTFVGTPCWMAPEV  201 (516)
T ss_pred             cccHHHHHHHHHHHHHHHHHHHhcCceecccccccEEEcCCCcEEEcCceeeeeecccCceeeEeeccccCcccccChHH
Confidence            78999999999999999999999999999999999999999999999999774322       12245689999999999


Q ss_pred             hhhc--CCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchh
Q 026540           75 ILRA--GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRI  152 (237)
Q Consensus        75 ~~~~--~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (237)
                      +++.  +|+.++||||||+..+|+.+|..||....        ..-.+++.+-+.+|.... +...              
T Consensus       202 l~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~p--------PmkvLl~tLqn~pp~~~t-~~~~--------------  258 (516)
T KOG0582|consen  202 LMQQLHGYDFKADIWSFGITACELAHGHAPFSKYP--------PMKVLLLTLQNDPPTLLT-SGLD--------------  258 (516)
T ss_pred             hhhcccCccchhhhhhhhHHHHHHhcCCCCcccCC--------hHHHHHHHhcCCCCCccc-ccCC--------------
Confidence            7754  69999999999999999999999997542        122333444445443321 0000              


Q ss_pred             ccccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccC
Q 026540          153 RRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNS  210 (237)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~  210 (237)
                             .+        ....++..|+.++..||+.||.+|||++++|+|+||+....
T Consensus       259 -------~d--------~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh~FFk~~k~  301 (516)
T KOG0582|consen  259 -------KD--------EDKKFSKSFREMIALCLVKDPSKRPTASKLLKHAFFKKAKS  301 (516)
T ss_pred             -------hH--------HhhhhcHHHHHHHHHHhhcCcccCCCHHHHhccHHHhhccc
Confidence                   00        11223568999999999999999999999999999996643

>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.4e-34  Score=239.02  Aligned_cols=158  Identities=20%  Similarity=0.313  Sum_probs=136.4

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCC-CcEEEeecCcceec---CcCcccCcCCCcccchHHhhh
Q 026540            2 TIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGID-MRCKVVDFGNACRA---NKQFAEEIQTRQYRAPEVILR   77 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~-~~~kl~dfg~~~~~---~~~~~~~~~~~~~~~PE~~~~   77 (237)
                      .+.|.++++++.|+++|+.|+|+.++.||||||+|||++.+ +.+||+|||++...   .......+|++.|+|||++.+
T Consensus       116 ~l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENilld~~~~~~Kl~DFG~s~~~~~~~~~l~t~cGsp~Y~aPEvl~~  195 (370)
T KOG0583|consen  116 RLKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENILLDGNEGNLKLSDFGLSAISPGEDGLLKTFCGSPAYAAPEVLSG  195 (370)
T ss_pred             CCChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEecCCCCCEEEeccccccccCCCCCcccCCCCCcccCCHHHhCC
Confidence            36789999999999999999999999999999999999999 99999999999765   355678899999999999999


Q ss_pred             cC-C-CchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccc
Q 026540           78 AG-Y-SFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRL  155 (237)
Q Consensus        78 ~~-~-~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (237)
                      .. | +.++|+||+|+++|.|++|..||...+      ....                                      
T Consensus       196 ~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~------~~~l--------------------------------------  231 (370)
T KOG0583|consen  196 KGTYSGKAADVWSLGVILYVLLCGRLPFDDSN------VPNL--------------------------------------  231 (370)
T ss_pred             CCCcCCchhhhhhhHHHHHHHHhCCCCCCCcc------HHHH--------------------------------------
Confidence            87 8 578999999999999999999998642      1011                                      


Q ss_pred             cCCchhHHhhhhcCCCHHh-HHHHHHHHHhccccCCCCCCCHHHHhcCCCcCc
Q 026540          156 KFWSLDRLLVDKYRFSETD-AREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSL  207 (237)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~-~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~  207 (237)
                          ..++....+.++..+ +.++.+|+.+||..||.+|+|+.+++.||||..
T Consensus       232 ----~~ki~~~~~~~p~~~~S~~~~~Li~~mL~~~P~~R~t~~~i~~h~w~~~  280 (370)
T KOG0583|consen  232 ----YRKIRKGEFKIPSYLLSPEARSLIEKMLVPDPSTRITLLEILEHPWFQK  280 (370)
T ss_pred             ----HHHHhcCCccCCCCcCCHHHHHHHHHHcCCCcccCCCHHHHhhChhhcc
Confidence                112233345566666 899999999999999999999999999999996

>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=4.4e-34  Score=228.21  Aligned_cols=163  Identities=24%  Similarity=0.312  Sum_probs=130.7

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCC-CCcEEEeecCcceecCc------CcccCcCCCcccchHHh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGI-DMRCKVVDFGNACRANK------QFAEEIQTRQYRAPEVI   75 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~-~~~~kl~dfg~~~~~~~------~~~~~~~~~~~~~PE~~   75 (237)
                      |.|..++++.+|+++||.|+|+.+++||||||+|||++. ++.+||+|||++.....      ......||+.|+|||++
T Consensus       114 l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~~~~~~~~~~~Gtp~~maPEvi  193 (313)
T KOG0198|consen  114 LPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILLDPSNGDVKLADFGLAKKLESKGTKSDSELSVQGTPNYMAPEVI  193 (313)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEEeCCCCeEEeccCccccccccccccccccccccCCccccCchhh
Confidence            789999999999999999999999999999999999999 79999999998865441      23356889999999999


Q ss_pred             hhcC-CCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcc
Q 026540           76 LRAG-YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRR  154 (237)
Q Consensus        76 ~~~~-~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (237)
                      ..+. ...++|+||+||++.+|++|+.||...        ......+..+..                            
T Consensus       194 ~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~--------~~~~~~~~~ig~----------------------------  237 (313)
T KOG0198|consen  194 RNGEVARRESDIWSLGCTVVEMLTGKPPWSEF--------FEEAEALLLIGR----------------------------  237 (313)
T ss_pred             cCCCcCCccchhhhcCCEEEeccCCCCcchhh--------cchHHHHHHHhc----------------------------
Confidence            9643 345899999999999999999999642        011111111110                            


Q ss_pred             ccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccC
Q 026540          155 LKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNS  210 (237)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~  210 (237)
                            ..   .....+..++.++.+|+.+||..||++||||+++|+|||......
T Consensus       238 ------~~---~~P~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~~~~~~  284 (313)
T KOG0198|consen  238 ------ED---SLPEIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPFLKQNSI  284 (313)
T ss_pred             ------cC---CCCCCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhChhhhcccc
Confidence                  00   011345667889999999999999999999999999999987654

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=100.00  E-value=7.2e-33  Score=223.61  Aligned_cols=185  Identities=22%  Similarity=0.324  Sum_probs=143.2

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCc---CcccCcCCCcccchHHhhhc-
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK---QFAEEIQTRQYRAPEVILRA-   78 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~---~~~~~~~~~~~~~PE~~~~~-   78 (237)
                      +++.++..++.|++.||.|+|+.+++||||||+||+++.++.+||+|||++.....   ......++..|+|||.+.+. 
T Consensus       100 ~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  179 (288)
T cd07871         100 MSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLINEKGELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGST  179 (288)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEECcCcceeeccCCCccccCceecccccChHHhcCCc
Confidence            46788999999999999999999999999999999999999999999999864322   22345678899999998764 


Q ss_pred             CCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCC
Q 026540           79 GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFW  158 (237)
Q Consensus        79 ~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (237)
                      .++.++|+||+|++++++++|+.||.+.      .....+..+.+..+.++...+........+....-     ......
T Consensus       180 ~~~~~~DiwslG~~l~~l~~g~~pf~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~  248 (288)
T cd07871         180 EYSTPIDMWGVGCILYEMATGRPMFPGS------TVKEELHLIFRLLGTPTEETWPGITSNEEFRSYLF-----PQYRAQ  248 (288)
T ss_pred             ccCcHHHHHHHHHHHHHHHhCCCCCCCC------CHHHHHHHHHHHhCCCChHHhhccccchhhhcccc-----CccCCC
Confidence            5889999999999999999999999765      35677788888888888877665443333221110     000000


Q ss_pred             chhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCc
Q 026540          159 SLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL  205 (237)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f  205 (237)
                      +...       .....+.++.+||.+||++||.+|+|++|+++||||
T Consensus       249 ~~~~-------~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~hp~f  288 (288)
T cd07871         249 PLIN-------HAPRLDTDGIDLLSSLLLYETKSRISAEAALRHSYF  288 (288)
T ss_pred             chHH-------hCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcCCCC
Confidence            0000       112245678899999999999999999999999998

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]

Probab=100.00  E-value=2.1e-33  Score=218.08  Aligned_cols=195  Identities=25%  Similarity=0.353  Sum_probs=156.1

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCc--CcccCcCCCcccchHHhhhcCC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK--QFAEEIQTRQYRAPEVILRAGY   80 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~--~~~~~~~~~~~~~PE~~~~~~~   80 (237)
                      +.-..+.+++.|.+.|+.|+|+.+|+||||||+||++..+..+||.|||+++....  ..+..+.+++|+|||++.+.++
T Consensus       115 lDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv~~~~~lKi~dfg~ar~e~~~~~mtpyVvtRyyrapevil~~~~  194 (369)
T KOG0665|consen  115 LDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVVNSDCTLKILDFGLARTEDTDFMMTPYVVTRYYRAPEVILGMGY  194 (369)
T ss_pred             cchHHHHHHHHHHHHHHHHHHhcceeecccCcccceecchhheeeccchhhcccCcccccCchhheeeccCchheeccCC
Confidence            34467889999999999999999999999999999999999999999999976543  3566788999999999999999


Q ss_pred             CchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCch
Q 026540           81 SFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSL  160 (237)
Q Consensus        81 ~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (237)
                      ...+||||+||++.+|++|...|.+.      +..+++.++.+.+|++.+.+...-......|-+..  ...   .....
T Consensus       195 ke~vdiwSvGci~gEli~~~Vlf~g~------d~idQ~~ki~~~lgtpd~~F~~qL~~~~r~yv~~~--~~y---~~~~f  263 (369)
T KOG0665|consen  195 KENVDIWSVGCIMGELILGTVLFPGK------DHIDQWNKIIEQLGTPDPSFMKQLQPTVRNYVENR--PQY---QAISF  263 (369)
T ss_pred             cccchhhhhhhHHHHHhhceEEecCc------hHHHHHHHHHHHhcCCCHHHHHHhhHHHHHHhhcC--hHh---hccch
Confidence            99999999999999999999999877      58899999999999999999876555444433311  000   00111


Q ss_pred             hHHhhhh-----cCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcc
Q 026540          161 DRLLVDK-----YRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLR  208 (237)
Q Consensus       161 ~~~~~~~-----~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~  208 (237)
                      .+..++.     ...+......+.+++.+||..||++|.++.++|+|||++.|
T Consensus       264 ~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~HPY~~vw  316 (369)
T KOG0665|consen  264 SELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRHPYIKVW  316 (369)
T ss_pred             hhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcCCeeeee
Confidence            2221111     11122335678899999999999999999999999999855

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=100.00  E-value=1.1e-32  Score=229.46  Aligned_cols=194  Identities=24%  Similarity=0.377  Sum_probs=145.0

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC--cccCcCCCcccchHHhhhcCC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ--FAEEIQTRQYRAPEVILRAGY   80 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~--~~~~~~~~~~~~PE~~~~~~~   80 (237)
                      +++.++..++.|++.||.|+|..+++||||||+||+++.++.++|+|||++......  .....++..|+|||++.+..+
T Consensus       123 ~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~  202 (364)
T cd07875         123 LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGY  202 (364)
T ss_pred             CCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEECCCCcEEEEeCCCccccCCCCcccCCcccCCcCCHHHHhCCCC
Confidence            467888999999999999999999999999999999999999999999998654432  234577899999999998889


Q ss_pred             CchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchh-hhcccCccchhccccCCc
Q 026540           81 SFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKD-YFDRHGDLKRIRRLKFWS  159 (237)
Q Consensus        81 ~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~  159 (237)
                      +.++|+||+||+++++++|+.||.+.      ........+.+.++.+.+.+......... +.........      ..
T Consensus       203 ~~~~DiwSlG~il~ell~g~~pf~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~  270 (364)
T cd07875         203 KENVDIWSVGCIMGEMIKGGVLFPGT------DHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAG------YS  270 (364)
T ss_pred             CchhhHHhHHHHHHHHHhCCCCCCCC------CHHHHHHHHHHhcCCCCHHHHHhhhHHHHHHHhhCCCcCC------CC
Confidence            99999999999999999999999766      36667777777777766655443222211 1111111000      00


Q ss_pred             hhHHhhh-----hcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcc
Q 026540          160 LDRLLVD-----KYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLR  208 (237)
Q Consensus       160 ~~~~~~~-----~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~  208 (237)
                      .......     ........+..+.+||.+||+.||.+|||++|+|+||||..+
T Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~hp~~~~~  324 (364)
T cd07875         271 FEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVW  324 (364)
T ss_pred             hHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcCcccccc
Confidence            0111000     001112235678999999999999999999999999999865

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]

Probab=100.00  E-value=5.4e-33  Score=228.52  Aligned_cols=168  Identities=23%  Similarity=0.294  Sum_probs=136.3

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCc-----------------------
Q 026540            2 TIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK-----------------------   58 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~-----------------------   58 (237)
                      +|.|..++-|+.+.+-|+..+|..|++||||||+|+|||..|++||+|||++.....                       
T Consensus       237 ~L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~~~~~~~~~~~~~~~~~~~~~~~~  316 (550)
T KOG0605|consen  237 TLTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDKKHRIESYRLDEQMQINLSEAKPS  316 (550)
T ss_pred             cCchHHHHHHHHHHHHHHHHHHHcCcccccCChhheeecCCCCEeeccccccchhhhhhhhhhhcchhhhhhhhccCCCc
Confidence            478999999999999999999999999999999999999999999999999821100                       


Q ss_pred             --C-------------------------cccCcCCCcccchHHhhhcCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCC
Q 026540           59 --Q-------------------------FAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGF  111 (237)
Q Consensus        59 --~-------------------------~~~~~~~~~~~~PE~~~~~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~  111 (237)
                        +                         ....+|||-|+|||++.+.+|+..+|.||+||++|||+.|++||.+.+    
T Consensus       317 ~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWSLG~ImyEmLvGyPPF~s~t----  392 (550)
T KOG0605|consen  317 DFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWSLGCIMYEMLVGYPPFCSET----  392 (550)
T ss_pred             cccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHHHHHHHHHHHhCCCCCCCCC----
Confidence              0                         011289999999999999999999999999999999999999999875    


Q ss_pred             CChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCC
Q 026540          112 CEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPE  191 (237)
Q Consensus       112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~  191 (237)
                        .......+...-..+                                      ..+....++.++.|||.+||. ||+
T Consensus       393 --p~~T~rkI~nwr~~l--------------------------------------~fP~~~~~s~eA~DLI~rll~-d~~  431 (550)
T KOG0605|consen  393 --PQETYRKIVNWRETL--------------------------------------KFPEEVDLSDEAKDLITRLLC-DPE  431 (550)
T ss_pred             --HHHHHHHHHHHhhhc--------------------------------------cCCCcCcccHHHHHHHHHHhc-CHH
Confidence              444444443321100                                      001122345889999999999 999


Q ss_pred             CCCC---HHHHhcCCCcCcccCCccc
Q 026540          192 KRPT---AQQCLQHPWLSLRNSTRDE  214 (237)
Q Consensus       192 ~R~t---~~ell~hp~f~~~~~~~~~  214 (237)
                      +|+.   ++||.+||||+++++....
T Consensus       432 ~RLG~~G~~EIK~HPfF~~v~W~~l~  457 (550)
T KOG0605|consen  432 NRLGSKGAEEIKKHPFFKGVDWDHLR  457 (550)
T ss_pred             HhcCcccHHHHhcCCccccCCcchhh
Confidence            9985   9999999999999886654

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=100.00  E-value=6.2e-33  Score=230.64  Aligned_cols=196  Identities=23%  Similarity=0.370  Sum_probs=145.1

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCc--CcccCcCCCcccchHHhhhcCC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK--QFAEEIQTRQYRAPEVILRAGY   80 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~--~~~~~~~~~~~~~PE~~~~~~~   80 (237)
                      +++.++..++.|++.||.|+|..+++||||||+||+++.++.++|+|||++.....  ......+++.|+|||.+.+..+
T Consensus       120 ~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~  199 (359)
T cd07876         120 LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTNFMMTPYVVTRYYRAPEVILGMGY  199 (359)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEecCCCccccccCccCCCCcccCCCCCchhccCCCC
Confidence            56888999999999999999999999999999999999999999999999865332  2334577889999999998889


Q ss_pred             CchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchh-hhcccCccchhccccCCc
Q 026540           81 SFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKD-YFDRHGDLKRIRRLKFWS  159 (237)
Q Consensus        81 ~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~  159 (237)
                      +.++|+||+|++++++++|..||.+.      +....+..+.+.++.++..+......... +..........      .
T Consensus       200 ~~~~DiwSlG~il~el~tg~~pf~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~  267 (359)
T cd07876         200 KENVDIWSVGCIMGELVKGSVIFQGT------DHIDQWNKVIEQLGTPSAEFMNRLQPTVRNYVENRPQYPGI------S  267 (359)
T ss_pred             CcchhhHHHHHHHHHHHhCCCCCCCC------CHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHhhCCCCCCc------c
Confidence            99999999999999999999999866      35667777777777776655432221111 11111110000      0


Q ss_pred             hhHHhh-----hhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccC
Q 026540          160 LDRLLV-----DKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNS  210 (237)
Q Consensus       160 ~~~~~~-----~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~  210 (237)
                      ......     .........+..+.+||.+||+.||++|||+.|+|+||||..+..
T Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~~~  323 (359)
T cd07876         268 FEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRHPYITVWYD  323 (359)
T ss_pred             hhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcCchhhhhcC
Confidence            000000     000112223567899999999999999999999999999986543

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=100.00  E-value=1.2e-32  Score=228.49  Aligned_cols=200  Identities=24%  Similarity=0.355  Sum_probs=144.3

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC--cccCcCCCcccchHHhhhcCC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ--FAEEIQTRQYRAPEVILRAGY   80 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~--~~~~~~~~~~~~PE~~~~~~~   80 (237)
                      +++.++..++.|++.||.|+|..+++||||||+||+++.++.+||+|||++......  .....+++.|+|||.+.+..+
T Consensus       116 l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~  195 (355)
T cd07874         116 LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGY  195 (355)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEECCCCCEEEeeCcccccCCCccccCCccccCCccCHHHHcCCCC
Confidence            567888999999999999999999999999999999999999999999998654432  234577899999999988889


Q ss_pred             CchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCch-hhhcccCccchhccccCCc
Q 026540           81 SFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSK-DYFDRHGDLKRIRRLKFWS  159 (237)
Q Consensus        81 ~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~  159 (237)
                      +.++|+||+|++++++++|..||.+.      ..........+.++.+...+........ .+................+
T Consensus       196 ~~~~DiwslG~il~el~~g~~pf~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  269 (355)
T cd07874         196 KENVDIWSVGCIMGEMVRHKILFPGR------DYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFP  269 (355)
T ss_pred             CchhhHHHHHHHHHHHHhCCCCCCCC------CHHHHHHHHHHHhCCCCHHHHHhhcHHHHHHHhcCCccccccchhhcc
Confidence            99999999999999999999999765      3556666667777766555443322211 1111111110000000000


Q ss_pred             hhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCccc
Q 026540          160 LDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRN  209 (237)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~  209 (237)
                       ..............+..+.+||.+||+.||++|||+.|+++||||..+.
T Consensus       270 -~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~hp~~~~~~  318 (355)
T cd07874         270 -DSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQHPYINVWY  318 (355)
T ss_pred             -ccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcCcchhccc
Confidence             0000000111222356789999999999999999999999999998653

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]

Probab=100.00  E-value=1.9e-33  Score=217.87  Aligned_cols=206  Identities=25%  Similarity=0.300  Sum_probs=151.3

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCC----CcEEEeecCcceecCcCc------ccCcCCCcccch
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGID----MRCKVVDFGNACRANKQF------AEEIQTRQYRAP   72 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~----~~~kl~dfg~~~~~~~~~------~~~~~~~~~~~P   72 (237)
                      |...-.+.++-||+.|++|+|+..+.||||||.|||+..+    |.+||+|+|+++.+..+.      ...+-|.+|+||
T Consensus       129 lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdgperG~VKIaDlGlaR~~~~plkpl~s~d~VVVTiWYRAP  208 (438)
T KOG0666|consen  129 LPRSMVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDGPERGRVKIADLGLARLFNNPLKPLASLDPVVVTIWYRAP  208 (438)
T ss_pred             CCHHHHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccCCccCeeEeecccHHHHhhccccccccCCceEEEEEecCh
Confidence            3445567899999999999999999999999999999877    899999999998766433      234668999999


Q ss_pred             HHhhhcC-CCchhhhhhhhhHHHHHhcCCcccCCCCCCC---CCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCc
Q 026540           73 EVILRAG-YSFSVDMWSFACTAFELATGDMLFAPKSGQG---FCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGD  148 (237)
Q Consensus        73 E~~~~~~-~~~~~diws~g~~l~~~~~g~~~f~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (237)
                      |.+.+.. |+++.|+|+.||++.|+++-.+.|.+...-.   ..-..+++.++++++|.+.+.-|+....-.++...   
T Consensus       209 ELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~---  285 (438)
T KOG0666|consen  209 ELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQLDRIFEVLGTPTDKDWPDLKKMPEYQTL---  285 (438)
T ss_pred             HHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHHHHHHHHHcCCCccccchhhhhCcchHHH---
Confidence            9999984 8999999999999999999999997653211   12358899999999999988766543332222110   


Q ss_pred             cchhccccCCc--hhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccCCcccc
Q 026540          149 LKRIRRLKFWS--LDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNSTRDET  215 (237)
Q Consensus       149 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~~~~~~  215 (237)
                      +..++...+.+  +.+.    ++....-++...+|+.+||++||.+|+|++|+|+|+||..-.-.+..+
T Consensus       286 ls~f~~~~~~n~sL~~~----~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAleh~yF~~d~lpp~pt  350 (438)
T KOG0666|consen  286 LSDFRRHYYDNVSLHKY----YHKHKVKDPSALDLLQKLLTYDPIKRITAEQALEHPYFTEDPLPPLPT  350 (438)
T ss_pred             HHHhHHhhcCcchHHHH----HHHhcCCCchHHHHHHHHhccCchhhccHHHHhcccccccCCCCCCcc
Confidence            01111000001  1111    111222234478999999999999999999999999999765554433

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=100.00  E-value=1.4e-32  Score=221.92  Aligned_cols=181  Identities=24%  Similarity=0.328  Sum_probs=138.8

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCc--CcccCcCCCcccchHHhhhcCC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK--QFAEEIQTRQYRAPEVILRAGY   80 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~--~~~~~~~~~~~~~PE~~~~~~~   80 (237)
                      +++..+..++.|++.||.|+|..+++||||||+||+++.++.++|+|||++.....  ......+++.|+|||.+.+..+
T Consensus       107 ~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  186 (290)
T cd07862         107 VPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSY  186 (290)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEcCCCCEEEccccceEeccCCcccccccccccccChHHHhCCCC
Confidence            67889999999999999999999999999999999999999999999999865432  2234567899999999988889


Q ss_pred             CchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCc-hhhhcccCccchhccccCCc
Q 026540           81 SFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQS-KDYFDRHGDLKRIRRLKFWS  159 (237)
Q Consensus        81 ~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~  159 (237)
                      +.++|+||+|++++++++|..||.+..      +.+.+..+....+.+.+.-+...... ...+.         .....+
T Consensus       187 ~~~~DiwslG~il~el~~g~~~f~~~~------~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~  251 (290)
T cd07862         187 ATPVDLWSVGCIFAEMFRRKPLFRGSS------DVDQLGKILDVIGLPGEEDWPRDVALPRQAFH---------SKSAQP  251 (290)
T ss_pred             CCccchHHHHHHHHHHHcCCCCcCCCC------HHHHHHHHHHHhCCCChhhchhhhcccchhcc---------CCCCCC
Confidence            999999999999999999999998763      56677777776665544322211110 00000         000111


Q ss_pred             hhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCc
Q 026540          160 LDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL  205 (237)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f  205 (237)
                      ....       ....+..+.+|+.+||+.||++|||+.|+|+||||
T Consensus       252 ~~~~-------~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~hp~f  290 (290)
T cd07862         252 IEKF-------VTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYF  290 (290)
T ss_pred             HHHH-------ccCCCHHHHHHHHHHhccCchhcCCHHHHhcCCCC
Confidence            1111       11246778899999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>PTZ00036 glycogen synthase kinase; Provisional

Probab=100.00  E-value=1.1e-32  Score=234.48  Aligned_cols=189  Identities=22%  Similarity=0.336  Sum_probs=143.4

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCC-cEEEeecCcceecC--cCcccCcCCCcccchHHhhhc-
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDM-RCKVVDFGNACRAN--KQFAEEIQTRQYRAPEVILRA-   78 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~-~~kl~dfg~~~~~~--~~~~~~~~~~~~~~PE~~~~~-   78 (237)
                      +++..+..++.|++.||.|+|+.+++||||||+|||++.++ .+||+|||++....  .......+++.|+|||++.+. 
T Consensus       167 l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl~~~~~~vkL~DFGla~~~~~~~~~~~~~~t~~y~aPE~~~~~~  246 (440)
T PTZ00036        167 LPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLIDPNTHTLKLCDFGSAKNLLAGQRSVSYICSRFYRAPELMLGAT  246 (440)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEEcCCCCceeeeccccchhccCCCCcccCCCCcCccCHHHhcCCC
Confidence            56778899999999999999999999999999999998764 79999999986543  223345778999999998765 


Q ss_pred             CCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCC
Q 026540           79 GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFW  158 (237)
Q Consensus        79 ~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (237)
                      .++.++|+||+||++++|++|..||.+..      ..+++..+...++.++..........  + ...    ........
T Consensus       247 ~~~~~~DiwSlGvil~elltG~~pf~~~~------~~~~~~~i~~~~~~p~~~~~~~~~~~--~-~~~----~~~~~~~~  313 (440)
T PTZ00036        247 NYTTHIDLWSLGCIIAEMILGYPIFSGQS------SVDQLVRIIQVLGTPTEDQLKEMNPN--Y-ADI----KFPDVKPK  313 (440)
T ss_pred             CCCcHHHHHHHHHHHHHHHhCCCCCCCCC------hHHHHHHHHHHhCCCCHHHHHHhchh--h-hcc----cCCccCch
Confidence            58999999999999999999999998763      66778888888887766544321110  0 000    00000000


Q ss_pred             chhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccC
Q 026540          159 SLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNS  210 (237)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~  210 (237)
                      .+..      .++...+.++.+||.+||++||.+|+|+.|+++||||.....
T Consensus       314 ~l~~------~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~hp~f~~~~~  359 (440)
T PTZ00036        314 DLKK------VFPKGTPDDAINFISQFLKYEPLKRLNPIEALADPFFDDLRD  359 (440)
T ss_pred             hHHH------HhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCChhHHhhhc
Confidence            1111      123445678999999999999999999999999999987643

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=100.00  E-value=1.6e-32  Score=221.27  Aligned_cols=188  Identities=26%  Similarity=0.375  Sum_probs=142.1

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCc----CcccCcCCCcccchHHhhh
Q 026540            2 TIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK----QFAEEIQTRQYRAPEVILR   77 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~----~~~~~~~~~~~~~PE~~~~   77 (237)
                      ++++..+..++.|++.||.|+|..+++||||||+||+++.++.++|+|||++.....    ......++..|+|||++.+
T Consensus        96 ~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  175 (287)
T cd07848          96 GVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSNANYTEYVATRWYRSPELLLG  175 (287)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccCcccccccccccccccccccccCCcHHHcC
Confidence            367889999999999999999999999999999999999999999999999865432    2233467889999999988


Q ss_pred             cCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccC
Q 026540           78 AGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKF  157 (237)
Q Consensus        78 ~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (237)
                      ..++.++|+||+||+++++++|+.||.+.      ...+.+..+.+..+..+............+...  ......  ..
T Consensus       176 ~~~~~~~DiwslGvil~el~~g~~pf~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~--~~  245 (287)
T cd07848         176 APYGKAVDMWSVGCILGELSDGQPLFPGE------SEIDQLFTIQKVLGPLPAEQMKLFYSNPRFHGL--RFPAVN--HP  245 (287)
T ss_pred             CCCCCchhHHhHHHHHHHHHhCCCCCCCC------CHHHHHHHHHHhhCCCCHHHHHhhhccchhccc--ccCccc--Cc
Confidence            88999999999999999999999999765      355666777777787776654322111111000  000000  00


Q ss_pred             CchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCc
Q 026540          158 WSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL  205 (237)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f  205 (237)
                      ....      ......++..+.+|+.+||+.||++|||++|+++||||
T Consensus       246 ~~~~------~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~hp~f  287 (287)
T cd07848         246 QSLE------RRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNHPAF  287 (287)
T ss_pred             ccHH------HhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence            0000      01122356789999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=100.00  E-value=1.3e-32  Score=223.66  Aligned_cols=193  Identities=21%  Similarity=0.253  Sum_probs=141.9

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecC---cCcccCcCCCcccchHHhhhc-
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRAN---KQFAEEIQTRQYRAPEVILRA-   78 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~---~~~~~~~~~~~~~~PE~~~~~-   78 (237)
                      +.+..+..++.|++.||.|+|+.+++||||||+||+++.++.+||+|||++....   .......+++.|+|||++.+. 
T Consensus       100 ~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  179 (303)
T cd07869         100 LHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLISDTGELKLADFGLARAKSVPSHTYSNEVVTLWYRPPDVLLGST  179 (303)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECCCCcceeccCCCccCCCCcccCCCCChHHHcCCC
Confidence            6788899999999999999999999999999999999999999999999886432   223345678899999998764 


Q ss_pred             CCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCC
Q 026540           79 GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFW  158 (237)
Q Consensus        79 ~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (237)
                      .++.++|+||+||+++++++|..||.+..     +....+..+....+.+....+........+....     .......
T Consensus       180 ~~~~~~DiwslG~il~~l~~g~~pf~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~  249 (303)
T cd07869         180 EYSTCLDMWGVGCIFVEMIQGVAAFPGMK-----DIQDQLERIFLVLGTPNEDTWPGVHSLPHFKPER-----FTLYSPK  249 (303)
T ss_pred             CCCcHHHHHHHHHHHHHHHhCCCCCCCCc-----cHHHHHHHHHHHhCCCChhhccchhhcccccccc-----ccccCCc
Confidence            47889999999999999999999997653     4566777777777766655443322211110000     0000000


Q ss_pred             chhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccC
Q 026540          159 SLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNS  210 (237)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~  210 (237)
                      .......     ....+..+.+|+.+||+.||++|+|++|+++||||.....
T Consensus       250 ~~~~~~~-----~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h~~f~~~~~  296 (303)
T cd07869         250 NLRQAWN-----KLSYVNHAEDLASKLLQCFPKNRLSAQAALSHEYFSDLPP  296 (303)
T ss_pred             cHHHHhh-----ccCCChHHHHHHHHHhccCchhccCHHHHhcCcccccCCh
Confidence            0000000     0112467889999999999999999999999999987653

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=5.8e-33  Score=234.10  Aligned_cols=164  Identities=21%  Similarity=0.282  Sum_probs=143.8

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCccee---cCcCcccCcCCCcccchHHhhhcC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACR---ANKQFAEEIQTRQYRAPEVILRAG   79 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~---~~~~~~~~~~~~~~~~PE~~~~~~   79 (237)
                      ++|.+|+-|+++++-||.|+|.++|++||||.+|||+|..|.+||+|||++..   .+...++.+||+.|+|||++.+..
T Consensus       465 F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m~~g~~TsTfCGTpey~aPEil~e~~  544 (694)
T KOG0694|consen  465 FSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLLDTEGHVKIADFGLCKEGMGQGDRTSTFCGTPEFLAPEVLTEQS  544 (694)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEEcccCcEEecccccccccCCCCCccccccCChhhcChhhhccCc
Confidence            68999999999999999999999999999999999999999999999999864   235567889999999999999999


Q ss_pred             CCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCc
Q 026540           80 YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWS  159 (237)
Q Consensus        80 ~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (237)
                      |+..+|.|+|||++|+|+.|..||.+.+      +++..+.|                                      
T Consensus       545 Yt~aVDWW~lGVLlyeML~Gq~PF~gdd------Eee~FdsI--------------------------------------  580 (694)
T KOG0694|consen  545 YTRAVDWWGLGVLLYEMLVGESPFPGDD------EEEVFDSI--------------------------------------  580 (694)
T ss_pred             ccchhhHHHHHHHHHHHHcCCCCCCCCC------HHHHHHHH--------------------------------------
Confidence            9999999999999999999999999873      33333332                                      


Q ss_pred             hhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCC-----HHHHhcCCCcCcccCCccc
Q 026540          160 LDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPT-----AQQCLQHPWLSLRNSTRDE  214 (237)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t-----~~ell~hp~f~~~~~~~~~  214 (237)
                          +.+....|..++.++.+++.++|..+|++|+.     ++++.+||||..+++...+
T Consensus       581 ----~~d~~~yP~~ls~ea~~il~~ll~k~p~kRLG~~e~d~~~i~~hpFFr~i~w~~L~  636 (694)
T KOG0694|consen  581 ----VNDEVRYPRFLSKEAIAIMRRLLRKNPEKRLGSGERDAEDIKKHPFFRSIDWDDLL  636 (694)
T ss_pred             ----hcCCCCCCCcccHHHHHHHHHHhccCcccccCCCCCCchhhhhCCccccCCHHHHh
Confidence                34455567788999999999999999999995     6899999999988775554

>PHA03212 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=2.3e-32  Score=229.22  Aligned_cols=201  Identities=19%  Similarity=0.228  Sum_probs=143.8

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecC----cCcccCcCCCcccchHHhhh
Q 026540            2 TIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRAN----KQFAEEIQTRQYRAPEVILR   77 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~----~~~~~~~~~~~~~~PE~~~~   77 (237)
                      .+++.+++.++.|++.||.|+|..+++||||||+||+++.++.++|+|||++....    .......|++.|+|||++.+
T Consensus       178 ~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~  257 (391)
T PHA03212        178 NIAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFINHPGDVCLGDFGAACFPVDINANKYYGWAGTIATNAPELLAR  257 (391)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHhEEEcCCCCEEEEeCCcccccccccccccccccCccCCCChhhhcC
Confidence            35678899999999999999999999999999999999999999999999985432    12234578999999999988


Q ss_pred             cCCCchhhhhhhhhHHHHHhcCCcccCCCCCC-CCCChHHHHHHHHHHHCCCCHHHHhcCCC-chhhh-cccCccchhcc
Q 026540           78 AGYSFSVDMWSFACTAFELATGDMLFAPKSGQ-GFCEDEDHLALMMELIGKMPRKIAIGGAQ-SKDYF-DRHGDLKRIRR  154 (237)
Q Consensus        78 ~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~  154 (237)
                      ..++.++|+||+||+++++++|..||...... +......++..+.+..|..+..+...... ....+ ........ . 
T Consensus       258 ~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~-  335 (391)
T PHA03212        258 DPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQANLDEIYIGLAKKSSR-K-  335 (391)
T ss_pred             CCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchhHHHHHHHHHHHhccCC-C-
Confidence            88999999999999999999999877654322 22245567777888877766443211100 00001 00000000 0 


Q ss_pred             ccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccCC
Q 026540          155 LKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNST  211 (237)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~~  211 (237)
                      ....+....       ....+.++.+||.+||++||++|||++|+|+||||......
T Consensus       336 ~~~~~~~~~-------~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~hp~f~~~~~~  385 (391)
T PHA03212        336 PGSRPLWTN-------LYELPIDLEYLICKMLAFDAHHRPSAEALLDFAAFQDIPDP  385 (391)
T ss_pred             CCCCCCHHH-------HhhhhhhHHHHHHHHhcCChhhCCCHHHHhcChhhccCCCC
Confidence            000000000       11245678999999999999999999999999999876443

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=100.00  E-value=3e-32  Score=222.77  Aligned_cols=199  Identities=23%  Similarity=0.251  Sum_probs=138.3

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCcccc----CCCCcEEEeecCcceecCcC------cccCcCCCcccch
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLD----GIDMRCKVVDFGNACRANKQ------FAEEIQTRQYRAP   72 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili----~~~~~~kl~dfg~~~~~~~~------~~~~~~~~~~~~P   72 (237)
                      +++..+..++.|++.||.|+|+.+++||||||+|||+    +.++.+||+|||++......      .....+++.|+||
T Consensus       105 l~~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aP  184 (317)
T cd07868         105 LPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAP  184 (317)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEecCCCCcCcEEEeecCceeccCCCCccccccCCccccccccCC
Confidence            6788899999999999999999999999999999999    45678999999998654422      2345678899999


Q ss_pred             HHhhhc-CCCchhhhhhhhhHHHHHhcCCcccCCCCCCC---CCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCc
Q 026540           73 EVILRA-GYSFSVDMWSFACTAFELATGDMLFAPKSGQG---FCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGD  148 (237)
Q Consensus        73 E~~~~~-~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (237)
                      |++.+. .++.++|+||+||+++++++|..||.......   ......++..+...+|.+....+...............
T Consensus       185 E~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (317)
T cd07868         185 ELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKD  264 (317)
T ss_pred             HHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCCcccccccccccHHHHHHHHHhcCCCChHHhHHHhhccchhhhhhh
Confidence            999875 58899999999999999999999997553221   11235677778888777665544322111110000000


Q ss_pred             cchhccccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCc
Q 026540          149 LKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL  205 (237)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f  205 (237)
                      .... .............   .....+..+.+||.+||++||.+|+|++|+|+||||
T Consensus       265 ~~~~-~~~~~~~~~~~~~---~~~~~~~~~~dli~~mL~~dP~~R~t~~e~l~hp~f  317 (317)
T cd07868         265 FRRN-TYTNCSLIKYMEK---HKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYF  317 (317)
T ss_pred             hhcc-ccCcccccchHHh---cCCCCChHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence            0000 0000000001000   011123567899999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=99.98  E-value=4.9e-32  Score=223.91  Aligned_cols=192  Identities=22%  Similarity=0.360  Sum_probs=145.4

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcCcccCcCCCcccchHHhhhc-CC
Q 026540            2 TIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRA-GY   80 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~PE~~~~~-~~   80 (237)
                      .+++.++..++.|++.||.|+|..+++||||||+||+++.++.+||+|||++...........+++.|+|||++.+. .+
T Consensus       114 ~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~  193 (343)
T cd07878         114 KLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLARQADDEMTGYVATRWYRAPEIMLNWMHY  193 (343)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEECCCCCEEEcCCccceecCCCcCCccccccccCchHhcCCccC
Confidence            36789999999999999999999999999999999999999999999999997766555566789999999999874 58


Q ss_pred             CchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCc--hhhhcccCccchhccccCC
Q 026540           81 SFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQS--KDYFDRHGDLKRIRRLKFW  158 (237)
Q Consensus        81 ~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~  158 (237)
                      +.++|+||+||+++++++|+.||.+.      ...+.+..+.+..+..+..........  ..+....      ......
T Consensus       194 ~~~~DiwslG~il~el~~g~~pf~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~  261 (343)
T cd07878         194 NQTVDIWSVGCIMAELLKGKALFPGN------DYIDQLKRIMEVVGTPSPEVLKKISSEHARKYIQSL------PHMPQQ  261 (343)
T ss_pred             CchhhhHhHHHHHHHHHHCCCCCCCC------CHHHHHHHHHHHhCCCCHHHHHhcchhhHHHHhhcc------ccccch
Confidence            89999999999999999999999765      355666777777776665544321110  0010000      000000


Q ss_pred             chhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccCCc
Q 026540          159 SLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNSTR  212 (237)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~~~  212 (237)
                      .....       ....++.+.+|+.+||+.||.+|||++|+++||||.....+.
T Consensus       262 ~~~~~-------~~~~~~~~~~li~~mL~~dp~~R~s~~ell~hp~~~~~~~~~  308 (343)
T cd07878         262 DLKKI-------FRGANPLAIDLLEKMLVLDSDKRISASEALAHPYFSQYHDPE  308 (343)
T ss_pred             hHHHh-------ccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchhccCCCc
Confidence            00000       112345678999999999999999999999999999875543

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]

Probab=99.98  E-value=2.5e-32  Score=210.57  Aligned_cols=168  Identities=23%  Similarity=0.327  Sum_probs=137.5

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCC---CCcEEEeecCcceecC--cCcccCcCCCcccchHHhhh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGI---DMRCKVVDFGNACRAN--KQFAEEIQTRQYRAPEVILR   77 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~---~~~~kl~dfg~~~~~~--~~~~~~~~~~~~~~PE~~~~   77 (237)
                      ++|++|..|++||..|+.|+|+++|.|||+||+|+|...   +..+||+|||++....  ......+.|++|.|||++-.
T Consensus       158 fTErea~eI~~qI~~Av~~lH~~nIAHRDlKpENLLyt~t~~na~lKLtDfGFAK~t~~~~~L~TPc~TPyYvaPevlg~  237 (400)
T KOG0604|consen  158 FTEREASEIMKQIGLAVRYLHSMNIAHRDLKPENLLYTTTSPNAPLKLTDFGFAKETQEPGDLMTPCFTPYYVAPEVLGP  237 (400)
T ss_pred             chHHHHHHHHHHHHHHHHHHHhcchhhccCChhheeeecCCCCcceEecccccccccCCCccccCCcccccccCHHHhCc
Confidence            689999999999999999999999999999999999964   5689999999997655  33456677999999999988


Q ss_pred             cCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccC
Q 026540           78 AGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKF  157 (237)
Q Consensus        78 ~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (237)
                      ..|+..+|+||+|+++|-+++|++||+...++.+..  ..                                        
T Consensus       238 eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aisp--gM----------------------------------------  275 (400)
T KOG0604|consen  238 EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISP--GM----------------------------------------  275 (400)
T ss_pred             hhcCCCCCccchhHHHHHhhcCCCcccccCCccCCh--hH----------------------------------------
Confidence            889999999999999999999999999775432110  01                                        


Q ss_pred             CchhHHhhhhcCCC----HHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccCCccc
Q 026540          158 WSLDRLLVDKYRFS----ETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNSTRDE  214 (237)
Q Consensus       158 ~~~~~~~~~~~~~~----~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~~~~~  214 (237)
                        ..++....+.++    ...++...++|+.+|..+|.+|+|++|++.|||+.+...-+..
T Consensus       276 --k~rI~~gqy~FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~hpwi~~~~~vp~t  334 (400)
T KOG0604|consen  276 --KRRIRTGQYEFPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDHPWINQYEAVPQT  334 (400)
T ss_pred             --HhHhhccCccCCChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhcCchhcccccCCCC
Confidence              122222233333    4457889999999999999999999999999999987655444

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=99.98  E-value=4.3e-32  Score=223.57  Aligned_cols=189  Identities=24%  Similarity=0.341  Sum_probs=143.1

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCc------CcccCcCCCcccchHHhh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK------QFAEEIQTRQYRAPEVIL   76 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~------~~~~~~~~~~~~~PE~~~   76 (237)
                      +++..+..++.|++.||.|+|+.+++||||||+|||++.++.+||+|||++.....      ......+++.|+|||++.
T Consensus       100 ~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~  179 (338)
T cd07859         100 LTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCG  179 (338)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEccCccccccccccCccccccCCCCCCCcCCHHHHh
Confidence            67889999999999999999999999999999999999999999999999864321      113457889999999987


Q ss_pred             h--cCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCc--hhhhcccCccchh
Q 026540           77 R--AGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQS--KDYFDRHGDLKRI  152 (237)
Q Consensus        77 ~--~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~  152 (237)
                      +  ..++.++|+||+||+++++++|+.||.+.      ....++..+....+.++..........  ..+....      
T Consensus       180 ~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~------~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~------  247 (338)
T cd07859         180 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGK------NVVHQLDLITDLLGTPSPETISRVRNEKARRYLSSM------  247 (338)
T ss_pred             ccccccCchhHHHHHHHHHHHHHcCCCCCCCC------ChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhh------
Confidence            6  46889999999999999999999999765      356677777888887776654332211  1111100      


Q ss_pred             ccccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccC
Q 026540          153 RRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNS  210 (237)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~  210 (237)
                      ......+....       ....+..+.+++.+||+.||++|||++|+++||||++...
T Consensus       248 ~~~~~~~~~~~-------~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~hp~f~~~~~  298 (338)
T cd07859         248 RKKQPVPFSQK-------FPNADPLALRLLERLLAFDPKDRPTAEEALADPYFKGLAK  298 (338)
T ss_pred             cccCCCchHHh-------cCCCChHHHHHHHHHcCcCcccCCCHHHHhcCchhhhcCc
Confidence            00000000000       1123567889999999999999999999999999987655

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=99.97  E-value=9.1e-32  Score=216.87  Aligned_cols=181  Identities=27%  Similarity=0.369  Sum_probs=138.2

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC--cccCcCCCcccchHHhhhcCC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ--FAEEIQTRQYRAPEVILRAGY   80 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~--~~~~~~~~~~~~PE~~~~~~~   80 (237)
                      +++.++..++.|++.||.|+|..+++||||||+||+++.++.++|+|||++......  .....++..|+|||++.+..+
T Consensus       105 ~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  184 (288)
T cd07863         105 LPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGQVKLADFGLARIYSCQMALTPVVVTLWYRAPEVLLQSTY  184 (288)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccCccccccCcccCCCccccccccCchHhhCCCC
Confidence            678899999999999999999999999999999999999999999999998654322  234467889999999998889


Q ss_pred             CchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCc-hhhhcccCccchhccccCCc
Q 026540           81 SFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQS-KDYFDRHGDLKRIRRLKFWS  159 (237)
Q Consensus        81 ~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~  159 (237)
                      +.++|+||+||+++++++|..||...      ...+.+..+....+.+....+...... ...+.         ......
T Consensus       185 ~~~~DiwslG~~l~~l~~g~~~f~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~  249 (288)
T cd07863         185 ATPVDMWSVGCIFAEMFRRKPLFCGN------SEADQLGKIFDLIGLPPEDDWPRDVTLPRGAFS---------PRGPRP  249 (288)
T ss_pred             CCcchhhhHHHHHHHHHhCCcCcCCC------CHHHHHHHHHHHhCCCChhhCcccccccccccC---------CCCCCc
Confidence            99999999999999999999998765      355666677776665544333211110 00000         000001


Q ss_pred             hhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCc
Q 026540          160 LDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL  205 (237)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f  205 (237)
                      ...       .....+..+.+++.+||+.||++|||++|++.||||
T Consensus       250 ~~~-------~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~hp~f  288 (288)
T cd07863         250 VQS-------VVPEIEESGAQLLLEMLTFNPHKRISAFRALQHPFF  288 (288)
T ss_pred             hHH-------hCcCcCHHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence            111       112345678899999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=99.97  E-value=1.3e-32  Score=225.53  Aligned_cols=160  Identities=23%  Similarity=0.325  Sum_probs=130.2

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecC---cCcccCcCCCcccchHHhhhcC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRAN---KQFAEEIQTRQYRAPEVILRAG   79 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~---~~~~~~~~~~~~~~PE~~~~~~   79 (237)
                      +++.++..++.|++.||+|+|..+++||||||+||+++.++.+||+|||++....   .......|++.|+|||++.+..
T Consensus        92 ~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~  171 (323)
T cd05571          92 FSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDND  171 (323)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEeeCCCCcccccCCCcccceecCccccChhhhcCCC
Confidence            5788999999999999999999999999999999999999999999999886422   2233456899999999999888


Q ss_pred             CCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCc
Q 026540           80 YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWS  159 (237)
Q Consensus        80 ~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (237)
                      ++.++|+||+||+++++++|..||....      .......+                                      
T Consensus       172 ~~~~~DiwSlG~il~elltg~~Pf~~~~------~~~~~~~~--------------------------------------  207 (323)
T cd05571         172 YGRAVDWWGLGVVMYEMMCGRLPFYNQD------HEKLFELI--------------------------------------  207 (323)
T ss_pred             CCccccCcccchhhhhhhcCCCCCCCCC------HHHHHHHH--------------------------------------
Confidence            9999999999999999999999997542      11111111                                      


Q ss_pred             hhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCC-----CHHHHhcCCCcCcccC
Q 026540          160 LDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRP-----TAQQCLQHPWLSLRNS  210 (237)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~-----t~~ell~hp~f~~~~~  210 (237)
                          .......+...+.++.+||.+||+.||++||     ++.++++||||...++
T Consensus       208 ----~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h~~f~~~~~  259 (323)
T cd05571         208 ----LMEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEHRFFASINW  259 (323)
T ss_pred             ----HcCCCCCCCCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHcCCCcCCCCH
Confidence                0011122344577889999999999999999     8999999999987644

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]

Probab=99.97  E-value=2.8e-32  Score=225.66  Aligned_cols=159  Identities=26%  Similarity=0.337  Sum_probs=136.2

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC---cccCcCCCcccchHHhhhc
Q 026540            2 TIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ---FAEEIQTRQYRAPEVILRA   78 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~~~~PE~~~~~   78 (237)
                      .+.|.++..++.+++.||+|+|+.+|.|||+||+|||++.++.+|++|||+++.++..   .+...||+.|||||+..+.
T Consensus        96 ~lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~t~vltsikGtPlYmAPElv~e~  175 (808)
T KOG0597|consen   96 KLPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILLEKGGTLKLCDFGLARAMSTNTSVLTSIKGTPLYMAPELVEEQ  175 (808)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeeecCCCceeechhhhhhhcccCceeeeeccCcccccCHHHHcCC
Confidence            4679999999999999999999999999999999999999999999999999877654   3456889999999999999


Q ss_pred             CCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCC
Q 026540           79 GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFW  158 (237)
Q Consensus        79 ~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (237)
                      +|+..+|+||+||++||+..|++||....         ..++...+                                  
T Consensus       176 pyd~~sDlWslGcilYE~~~G~PPF~a~s---------i~~Lv~~I----------------------------------  212 (808)
T KOG0597|consen  176 PYDHTSDLWSLGCILYELYVGQPPFYARS---------ITQLVKSI----------------------------------  212 (808)
T ss_pred             CccchhhHHHHHHHHHHHhcCCCCchHHH---------HHHHHHHH----------------------------------
Confidence            99999999999999999999999998542         22222222                                  


Q ss_pred             chhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcc
Q 026540          159 SLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLR  208 (237)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~  208 (237)
                           ..+....+...+..|++|+..+|+.||.+|+|+.+++.|||+++.
T Consensus       213 -----~~d~v~~p~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~HpF~k~~  257 (808)
T KOG0597|consen  213 -----LKDPVKPPSTASSSFVNFLQGLLIKDPAQRLTWTDLLGHPFWKGK  257 (808)
T ss_pred             -----hcCCCCCcccccHHHHHHHHHHhhcChhhcccHHHHhcChHHhhh
Confidence                 222233355678899999999999999999999999999999854

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=99.97  E-value=4.2e-32  Score=218.82  Aligned_cols=169  Identities=23%  Similarity=0.253  Sum_probs=134.3

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCc--CcccCcCCCcccchHHhhhcC
Q 026540            2 TIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK--QFAEEIQTRQYRAPEVILRAG   79 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~--~~~~~~~~~~~~~PE~~~~~~   79 (237)
                      ++++.++..++.|++.||+|+|+.+++||||||+||+++.++.++|+|||++.....  ......|+..|+|||++.+..
T Consensus        98 ~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~  177 (285)
T cd05631          98 GFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILLDDRGHIRISDLGLAVQIPEGETVRGRVGTVGYMAPEVINNEK  177 (285)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCCeecCCCCCCCccCHhhhcCCC
Confidence            367889999999999999999999999999999999999999999999999865432  233457899999999999888


Q ss_pred             CCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCc
Q 026540           80 YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWS  159 (237)
Q Consensus        80 ~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (237)
                      ++.++|+||+||+++++++|..||......      .....+....                                  
T Consensus       178 ~~~~~DvwslGvil~el~~g~~pf~~~~~~------~~~~~~~~~~----------------------------------  217 (285)
T cd05631         178 YTFSPDWWGLGCLIYEMIQGQSPFRKRKER------VKREEVDRRV----------------------------------  217 (285)
T ss_pred             CCcccCchhHHHHHHHHHhCCCCCCCCCcc------hhHHHHHHHh----------------------------------
Confidence            999999999999999999999999765311      0111110000                                  


Q ss_pred             hhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCC-----HHHHhcCCCcCcccCCccc
Q 026540          160 LDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPT-----AQQCLQHPWLSLRNSTRDE  214 (237)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t-----~~ell~hp~f~~~~~~~~~  214 (237)
                          .......+...+..+.+|+.+||+.||.+|++     ++++++||||.+.++...+
T Consensus       218 ----~~~~~~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h~~~~~~~~~~~~  273 (285)
T cd05631         218 ----KEDQEEYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQHPIFKNINFKRLE  273 (285)
T ss_pred             ----hcccccCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcCHhhcCCCHHHHH
Confidence                00011123345678899999999999999997     8999999999988765554

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=99.97  E-value=1.8e-31  Score=217.99  Aligned_cols=200  Identities=24%  Similarity=0.273  Sum_probs=138.0

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCcccc----CCCCcEEEeecCcceecCcC------cccCcCCCcccc
Q 026540            2 TIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLD----GIDMRCKVVDFGNACRANKQ------FAEEIQTRQYRA   71 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili----~~~~~~kl~dfg~~~~~~~~------~~~~~~~~~~~~   71 (237)
                      .+++..+..++.|++.||.|+|+.+++||||||+||++    +.++.++|+|||++......      .....++..|+|
T Consensus       104 ~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~a  183 (317)
T cd07867         104 QLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRA  183 (317)
T ss_pred             cCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEccCCCCCCcEEEeeccceeccCCCcccccccCcceecccccC
Confidence            36778899999999999999999999999999999999    45678999999998654322      223466889999


Q ss_pred             hHHhhhc-CCCchhhhhhhhhHHHHHhcCCcccCCCCCCC---CCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccC
Q 026540           72 PEVILRA-GYSFSVDMWSFACTAFELATGDMLFAPKSGQG---FCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHG  147 (237)
Q Consensus        72 PE~~~~~-~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  147 (237)
                      ||.+.+. .++.++|+||+|++++++++|..||.......   ......++..+.+.++.+....+........+.....
T Consensus       184 PE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (317)
T cd07867         184 PELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIFSVMGFPADKDWEDIRKMPEYPTLQK  263 (317)
T ss_pred             cHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccccccccccccccHHHHHHHHHhcCCCChhhhhhhhhcccchhhhh
Confidence            9999875 47899999999999999999999997543221   1123456667777777655544432222111111000


Q ss_pred             ccchhccccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCc
Q 026540          148 DLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL  205 (237)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f  205 (237)
                      ....   . .....................+.+|+.+||+.||.+|||++|+|+||||
T Consensus       264 ~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~R~t~~e~l~hp~f  317 (317)
T cd07867         264 DFRR---T-TYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQDPYF  317 (317)
T ss_pred             hhcc---c-ccCCchhhhhhhcccCCCChHHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence            0000   0 0000000000111122234668899999999999999999999999998

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=4.9e-32  Score=219.06  Aligned_cols=163  Identities=21%  Similarity=0.201  Sum_probs=132.8

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcCcccCcCCCcccchHHhhhcCCCc
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSF   82 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~   82 (237)
                      +++..+..++.|++.||.|+|+.+++||||||+||+++.++.++|+|||++...........|++.|+|||.+.+..++.
T Consensus        98 ~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  177 (291)
T cd05612          98 FSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILLDKEGHIKLTDFGFAKKLRDRTWTLCGTPEYLAPEVIQSKGHNK  177 (291)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEEecCcchhccCCcccccCChhhcCHHHHcCCCCCc
Confidence            57888999999999999999999999999999999999999999999999876554444567899999999998888999


Q ss_pred             hhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCchhH
Q 026540           83 SVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDR  162 (237)
Q Consensus        83 ~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (237)
                      ++|+||+|++++++++|..||....      .......+                                         
T Consensus       178 ~~DiwSlG~il~~l~~g~~pf~~~~------~~~~~~~i-----------------------------------------  210 (291)
T cd05612         178 AVDWWALGILIYEMLVGYPPFFDDN------PFGIYEKI-----------------------------------------  210 (291)
T ss_pred             hhhHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHH-----------------------------------------
Confidence            9999999999999999999997542      11111111                                         


Q ss_pred             HhhhhcCCCHHhHHHHHHHHHhccccCCCCCCC-----HHHHhcCCCcCcccCCcc
Q 026540          163 LLVDKYRFSETDAREFAEFLVPLLDFTPEKRPT-----AQQCLQHPWLSLRNSTRD  213 (237)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t-----~~ell~hp~f~~~~~~~~  213 (237)
                       .......+...+..+.+||.+||+.||.+|++     ++++++||||...++...
T Consensus       211 -~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~~~~~~~  265 (291)
T cd05612         211 -LAGKLEFPRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNHRWFKSVDWDDV  265 (291)
T ss_pred             -HhCCcCCCccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcCccccCCCHHHH
Confidence             00111223344678899999999999999995     999999999997665443

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=99.97  E-value=5.1e-32  Score=223.42  Aligned_cols=160  Identities=21%  Similarity=0.190  Sum_probs=132.5

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcCcccCcCCCcccchHHhhhcCCCc
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSF   82 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~   82 (237)
                      +++..+..++.|++.||.|+|..+++||||||+|||++.++.++|+|||++...........|++.|+|||++.+..++.
T Consensus       128 ~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  207 (340)
T PTZ00426        128 FPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLLDKDGFIKMTDFGFAKVVDTRTYTLCGTPEYIAPEILLNVGHGK  207 (340)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEecCCCCeecCCCcceecCChhhcCHHHHhCCCCCc
Confidence            57888999999999999999999999999999999999999999999999876655555667899999999998888999


Q ss_pred             hhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCchhH
Q 026540           83 SVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDR  162 (237)
Q Consensus        83 ~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (237)
                      ++|+||+||++++|++|..||....      .......+.                                        
T Consensus       208 ~~DiwSlGvil~ell~G~~Pf~~~~------~~~~~~~i~----------------------------------------  241 (340)
T PTZ00426        208 AADWWTLGIFIYEILVGCPPFYANE------PLLIYQKIL----------------------------------------  241 (340)
T ss_pred             cccccchhhHHHHHhcCCCCCCCCC------HHHHHHHHh----------------------------------------
Confidence            9999999999999999999997652      111111111                                        


Q ss_pred             HhhhhcCCCHHhHHHHHHHHHhccccCCCCCC-----CHHHHhcCCCcCcccC
Q 026540          163 LLVDKYRFSETDAREFAEFLVPLLDFTPEKRP-----TAQQCLQHPWLSLRNS  210 (237)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~-----t~~ell~hp~f~~~~~  210 (237)
                        ......+...+..+.+++.+||+.||++|+     +++++++||||...++
T Consensus       242 --~~~~~~p~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~hp~f~~~~~  292 (340)
T PTZ00426        242 --EGIIYFPKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEHPWFGNIDW  292 (340)
T ss_pred             --cCCCCCCCCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcCCCcCCCCH
Confidence              111122334567788999999999999996     8999999999997654

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=99.97  E-value=2.7e-31  Score=221.80  Aligned_cols=189  Identities=24%  Similarity=0.352  Sum_probs=142.6

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCc----CcccCcCCCcccchHHhhhc
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK----QFAEEIQTRQYRAPEVILRA   78 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~----~~~~~~~~~~~~~PE~~~~~   78 (237)
                      +++.++..++.|++.||.|+|..+++||||||+|||++.++.++|+|||++.....    ......+++.|+|||.+.+.
T Consensus       100 l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  179 (372)
T cd07853         100 LSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEEPDESKHMTQEVVTQYYRAPEILMGS  179 (372)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEECCCCCEEeccccceeecccCccccCCCCCcCCCcCCHHHHcCC
Confidence            57888999999999999999999999999999999999999999999999865332    12334668899999999875


Q ss_pred             -CCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCc-hhhhcccCccchhcccc
Q 026540           79 -GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQS-KDYFDRHGDLKRIRRLK  156 (237)
Q Consensus        79 -~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  156 (237)
                       .++.++|+||+||+++++++|+.||.+.      ....++..+.+.+|.++.......... ..+.....        .
T Consensus       180 ~~~~~~~DiwslG~il~el~~g~~pf~~~------~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~--------~  245 (372)
T cd07853         180 RHYTSAVDIWSVGCIFAELLGRRILFQAQ------SPIQQLDLITDLLGTPSLEAMRSACEGARAHILRGP--------H  245 (372)
T ss_pred             CCCCcHHHHHhHHHHHHHHHcCCCCCCCC------CHHHHHHHHHHHcCCCCHHHHHHhhHHHHHHHHhCC--------C
Confidence             4789999999999999999999999876      366778888888887665433221110 00000000        0


Q ss_pred             CCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcc
Q 026540          157 FWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLR  208 (237)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~  208 (237)
                      ..+.   ...........+.++.+||.+||+.||.+|||++|+++||||...
T Consensus       246 ~~~~---~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~  294 (372)
T cd07853         246 KPPS---LPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAHPYLDEG  294 (372)
T ss_pred             CCCc---hHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcCHhhCCC
Confidence            0000   001112233346788999999999999999999999999999874

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=99.97  E-value=5.3e-32  Score=222.51  Aligned_cols=161  Identities=21%  Similarity=0.199  Sum_probs=131.6

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcCcccCcCCCcccchHHhhhcCCCc
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSF   82 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~   82 (237)
                      +++..+..++.|++.||.|+|..+++||||||+|||++.++.+||+|||++...........|++.|+|||++.+..++.
T Consensus       115 ~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  194 (329)
T PTZ00263        115 FPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDRTFTLCGTPEYLAPEVIQSKGHGK  194 (329)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEECCCCCEEEeeccCceEcCCCcceecCChhhcCHHHHcCCCCCC
Confidence            56788899999999999999999999999999999999999999999999977655555567899999999999888999


Q ss_pred             hhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCchhH
Q 026540           83 SVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDR  162 (237)
Q Consensus        83 ~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (237)
                      ++|+||+||+++++++|..||.+..      .......+.                                        
T Consensus       195 ~~DiwslG~il~elltg~~pf~~~~------~~~~~~~i~----------------------------------------  228 (329)
T PTZ00263        195 AVDWWTMGVLLYEFIAGYPPFFDDT------PFRIYEKIL----------------------------------------  228 (329)
T ss_pred             cceeechHHHHHHHHcCCCCCCCCC------HHHHHHHHh----------------------------------------
Confidence            9999999999999999999997542      111111110                                        


Q ss_pred             HhhhhcCCCHHhHHHHHHHHHhccccCCCCCCC-----HHHHhcCCCcCcccCC
Q 026540          163 LLVDKYRFSETDAREFAEFLVPLLDFTPEKRPT-----AQQCLQHPWLSLRNST  211 (237)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t-----~~ell~hp~f~~~~~~  211 (237)
                        ......+...+..+.+||.+||+.||.+|++     +++++.||||...++.
T Consensus       229 --~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~hp~f~~~~~~  280 (329)
T PTZ00263        229 --AGRLKFPNWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNHPYFHGANWD  280 (329)
T ss_pred             --cCCcCCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCccCCCCHH
Confidence              0111123334667889999999999999997     7999999999875443

>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.97  E-value=5.1e-32  Score=219.94  Aligned_cols=158  Identities=22%  Similarity=0.365  Sum_probs=129.8

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecC--------cCcccCcCCCcccchHH
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRAN--------KQFAEEIQTRQYRAPEV   74 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~--------~~~~~~~~~~~~~~PE~   74 (237)
                      |++.+|++|++.++.||.|||..+|+||||||+|+|++.+|.+||+|||.+....        ......+||+.|+|||.
T Consensus       207 ls~~~Ar~ylrDvv~GLEYLH~QgiiHRDIKPsNLLl~~~g~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~  286 (576)
T KOG0585|consen  207 LSEQQARKYLRDVVLGLEYLHYQGIIHRDIKPSNLLLSSDGTVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPEL  286 (576)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEEcCCCcEEeeccceeeecccCCccccHHHHhhcCCCccccchHh
Confidence            7899999999999999999999999999999999999999999999999986542        11234689999999999


Q ss_pred             hhhcC----CCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccc
Q 026540           75 ILRAG----YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLK  150 (237)
Q Consensus        75 ~~~~~----~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (237)
                      +.++.    .+.+.|+||+|+++|.++.|+.||.+..      .....                                
T Consensus       287 c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~------~~~l~--------------------------------  328 (576)
T KOG0585|consen  287 CSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDF------ELELF--------------------------------  328 (576)
T ss_pred             hcCCCCccccchhhhhhhhhhhHHHhhhccCCcccch------HHHHH--------------------------------
Confidence            99742    3678999999999999999999998653      11111                                


Q ss_pred             hhccccCCchhHHhhhhcCCCH--HhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcc
Q 026540          151 RIRRLKFWSLDRLLVDKYRFSE--TDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLR  208 (237)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~  208 (237)
                                .++..+...++.  ++...+.+||.+||..||.+|++..++..|||....
T Consensus       329 ----------~KIvn~pL~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt~~  378 (576)
T KOG0585|consen  329 ----------DKIVNDPLEFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWVTRD  378 (576)
T ss_pred             ----------HHHhcCcccCCCcccccHHHHHHHHHHhhcChhheeehhhheecceeccC
Confidence                      122222222322  357889999999999999999999999999999866

>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]

Probab=99.97  E-value=7.7e-32  Score=217.90  Aligned_cols=169  Identities=25%  Similarity=0.286  Sum_probs=143.6

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecC--cCcccCcCCCcccchHHhhhcC
Q 026540            2 TIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRAN--KQFAEEIQTRQYRAPEVILRAG   79 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~--~~~~~~~~~~~~~~PE~~~~~~   79 (237)
                      |++|++++-|+++|+-||.++|..+|++||+||+|||+|..|+++|+|+|++....  .+...++||.+|||||++....
T Consensus       283 gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILLDd~GhvRISDLGLAvei~~g~~~~~rvGT~GYMAPEvl~ne~  362 (591)
T KOG0986|consen  283 GFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILLDDHGHVRISDLGLAVEIPEGKPIRGRVGTVGYMAPEVLQNEV  362 (591)
T ss_pred             CCchHHHHHHHHHHHhhHHHHHhcceeeccCChhheeeccCCCeEeeccceEEecCCCCccccccCcccccCHHHHcCCc
Confidence            68999999999999999999999999999999999999999999999999997654  5677789999999999999999


Q ss_pred             CCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCc
Q 026540           80 YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWS  159 (237)
Q Consensus        80 ~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (237)
                      |+.++|.||+||++|+|+.|+.||.....-      .-.+.                                      -
T Consensus       363 Y~~s~Dwf~lGCllYemi~G~sPFr~~KeK------vk~eE--------------------------------------v  398 (591)
T KOG0986|consen  363 YDFSPDWFSLGCLLYEMIAGHSPFRQRKEK------VKREE--------------------------------------V  398 (591)
T ss_pred             ccCCccHHHHHhHHHHHHcccCchhhhhhh------hhHHH--------------------------------------H
Confidence            999999999999999999999999755300      00000                                      0


Q ss_pred             hhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCC-----HHHHhcCCCcCcccCCccc
Q 026540          160 LDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPT-----AQQCLQHPWLSLRNSTRDE  214 (237)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t-----~~ell~hp~f~~~~~~~~~  214 (237)
                      ..+...+....++.+++++.++...+|..||++|+.     +.++.+||||+..++++.+
T Consensus       399 drr~~~~~~ey~~kFS~eakslc~~LL~Kdp~~RLGcrg~ga~evk~HpfFk~lnw~rle  458 (591)
T KOG0986|consen  399 DRRTLEDPEEYSDKFSEEAKSLCEGLLTKDPEKRLGCRGEGAQEVKEHPFFKDLNWRRLE  458 (591)
T ss_pred             HHHHhcchhhcccccCHHHHHHHHHHHccCHHHhccCCCcCcchhhhCcccccCCHhHHh
Confidence            122233344567788999999999999999999985     7799999999998877654

>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.97  E-value=2.1e-31  Score=218.73  Aligned_cols=165  Identities=22%  Similarity=0.337  Sum_probs=143.5

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCcccc-CCCCcEEEeecCccee--cCcCcccCcCCCcccchHHhhhc
Q 026540            2 TIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLD-GIDMRCKVVDFGNACR--ANKQFAEEIQTRQYRAPEVILRA   78 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili-~~~~~~kl~dfg~~~~--~~~~~~~~~~~~~~~~PE~~~~~   78 (237)
                      ||+|..+++|+.||+.||.|+|..|.+||||||+|+++ ..-|-+||.|||++..  .++..+..+|+..|-|||++.+.
T Consensus       114 Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG~kL~TsCGSLAYSAPEILLGD  193 (864)
T KOG4717|consen  114 GLNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPGKKLTTSCGSLAYSAPEILLGD  193 (864)
T ss_pred             cccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEeeecCceEeeeccccccCCCcchhhcccchhhccCchhhhcC
Confidence            78999999999999999999999999999999999976 5568999999999844  44667788999999999999999


Q ss_pred             CCC-chhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccC
Q 026540           79 GYS-FSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKF  157 (237)
Q Consensus        79 ~~~-~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (237)
                      .|. +++||||+|+++|-+++|+.||..-+      +.+                                         
T Consensus       194 sYDAPAVDiWSLGVILyMLVCGq~PFqeAN------DSE-----------------------------------------  226 (864)
T KOG4717|consen  194 SYDAPAVDIWSLGVILYMLVCGQPPFQEAN------DSE-----------------------------------------  226 (864)
T ss_pred             ccCCcchhhhHHHHHHHHHHhCCCcccccc------chh-----------------------------------------
Confidence            985 56899999999999999999997442      111                                         


Q ss_pred             CchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccCCccc
Q 026540          158 WSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNSTRDE  214 (237)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~~~~~  214 (237)
                       .+..++...|..|...+.++++||.+||+.||.+|.|.++|..++|+...+.....
T Consensus       227 -TLTmImDCKYtvPshvS~eCrdLI~sMLvRdPkkRAslEeI~s~~Wlq~~D~~~sT  282 (864)
T KOG4717|consen  227 -TLTMIMDCKYTVPSHVSKECRDLIQSMLVRDPKKRASLEEIVSTSWLQAGDRGLST  282 (864)
T ss_pred             -hhhhhhcccccCchhhhHHHHHHHHHHHhcCchhhccHHHHhccccccCCCCCccc
Confidence             24455666788888999999999999999999999999999999999988765443

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=99.97  E-value=3.3e-31  Score=215.96  Aligned_cols=190  Identities=24%  Similarity=0.346  Sum_probs=145.1

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCc---CcccCcCCCcccchHHhhhc-
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK---QFAEEIQTRQYRAPEVILRA-   78 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~---~~~~~~~~~~~~~PE~~~~~-   78 (237)
                      +++.++..++.|++.||.|+|..+++||||||+||+++.++.++|+|||++.....   ......++..|++||.+.+. 
T Consensus       101 ~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  180 (309)
T cd07872         101 MSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGSS  180 (309)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECccccceecCCCccccccccccccccCCHHHhCCC
Confidence            56788899999999999999999999999999999999999999999999864332   22334668899999998764 


Q ss_pred             CCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCC
Q 026540           79 GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFW  158 (237)
Q Consensus        79 ~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (237)
                      .++.++|+||+|++++++++|+.||.+.+      ..+.+..+.+.++.++...+........+.....     ......
T Consensus       181 ~~~~~~DiwslG~il~el~tg~~pf~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~  249 (309)
T cd07872         181 EYSTQIDMWGVGCIFFEMASGRPLFPGST------VEDELHLIFRLLGTPTEETWPGISSNDEFKNYNF-----PKYKPQ  249 (309)
T ss_pred             CCCcHHHHHHHHHHHHHHHhCCCCCCCCC------hHHHHHHHHHHhCCCCHHHHhhhcchhhhhhhhc-----CccCCC
Confidence            57899999999999999999999997663      5677788888888877776654333222211000     000000


Q ss_pred             chhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccC
Q 026540          159 SLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNS  210 (237)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~  210 (237)
                      +..       ......+.++.+||.+||+.||.+|+|++|+++||||.....
T Consensus       250 ~~~-------~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~~~  294 (309)
T cd07872         250 PLI-------NHAPRLDTEGIELLTKFLQYESKKRISAEEAMKHAYFRSLGT  294 (309)
T ss_pred             chh-------hhccCCCHHHHHHHHHhccCChhhCCCHHHHhcChhhhhccc
Confidence            000       011234677899999999999999999999999999997653

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.97  E-value=5.8e-31  Score=214.38  Aligned_cols=170  Identities=61%  Similarity=1.136  Sum_probs=163.3

Q ss_pred             CCcEEEeecCcceecCcCcccCcCCCcccchHHhhhcCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHH
Q 026540           42 DMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALM  121 (237)
Q Consensus        42 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~  121 (237)
                      +..|||+|||.++-....++.-+.|+.|++||++.+.+|+..+||||++|+.+|++||-.+|.+..+.++..+++++++|
T Consensus       390 di~vKIaDlGNACW~~khFT~DIQTRQYRapEVllGsgY~~~ADiWS~AC~~FELaTGDyLFePhsG~~Y~rDEDHiA~i  469 (590)
T KOG1290|consen  390 DIRVKIADLGNACWVHKHFTEDIQTRQYRAPEVLLGSGYSTSADIWSTACMAFELATGDYLFEPHSGENYSRDEDHIALI  469 (590)
T ss_pred             ceeEEEeeccchhhhhhhhchhhhhhhccCcceeecCCCCCchhHHHHHHHHHHhhcCceeecCCCCCCCCccHHHHHHH
Confidence            45899999999998888888889999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhc
Q 026540          122 MELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ  201 (237)
Q Consensus       122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  201 (237)
                      ++++|.+|..+........+||.+.+.++.+..+..|++.+.+.+.|.++.....+|.+|+.-||+++|++|+||.+.|+
T Consensus       470 ~ELLG~iPr~ia~~Gk~SRdFFnr~G~LrhI~~LK~WpL~~VL~eKY~~s~e~A~~fsdFL~PmLef~PeKR~tA~~cl~  549 (590)
T KOG1290|consen  470 MELLGKIPRKIALGGKYSRDFFNRRGELRHIRRLKPWPLYEVLIEKYEWSEEDAQQFSDFLSPMLEFDPEKRPTAAQCLK  549 (590)
T ss_pred             HHHHhhccHHHHhcCcchHhhhccccceecccccCCCcHHHHHHHHhCCCHHHHHHHHHHHHHHHhcCccccccHHHHhc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCcCcccCC
Q 026540          202 HPWLSLRNST  211 (237)
Q Consensus       202 hp~f~~~~~~  211 (237)
                      |||+...-..
T Consensus       550 hPwLn~~~~~  559 (590)
T KOG1290|consen  550 HPWLNPVAGP  559 (590)
T ss_pred             CccccCCCCC
Confidence            9999966443

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=99.97  E-value=8.4e-31  Score=217.37  Aligned_cols=195  Identities=25%  Similarity=0.386  Sum_probs=146.6

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcCc--ccCcCCCcccchHHhhhcCC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQF--AEEIQTRQYRAPEVILRAGY   80 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~~--~~~~~~~~~~~PE~~~~~~~   80 (237)
                      +++.++..++.|++.||.|+|..++.|+||||+||+++.++.++|+|||++.......  ....++..|++||.+.+..+
T Consensus       115 l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  194 (353)
T cd07850         115 LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGY  194 (353)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCccceeCCCCCCCCCCcccccccCHHHHhCCCC
Confidence            5778899999999999999999999999999999999999999999999987654322  23456788999999998889


Q ss_pred             CchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhh-cccCccchhccccCCc
Q 026540           81 SFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYF-DRHGDLKRIRRLKFWS  159 (237)
Q Consensus        81 ~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  159 (237)
                      +.++|+||+|++++++++|+.||...      +.......+.+.++.++..+..........+ .......      ..+
T Consensus       195 ~~~~DvwslG~~l~~l~~g~~pf~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~  262 (353)
T cd07850         195 KENVDIWSVGCIMGEMIRGTVLFPGT------DHIDQWNKIIEQLGTPSDEFMSRLQPTVRNYVENRPKYA------GYS  262 (353)
T ss_pred             CCchhhHhHHHHHHHHHHCCCCCCCC------CHHHHHHHHHHhcCCCCHHHHHHhhhhhhHHhhcCCCCC------Ccc
Confidence            99999999999999999999999765      3566777778888887776654332222211 1111000      000


Q ss_pred             hhHHhhh------hcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCccc
Q 026540          160 LDRLLVD------KYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRN  209 (237)
Q Consensus       160 ~~~~~~~------~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~  209 (237)
                      .......      ....+...+..+.+||.+||++||++|||+.|+|+||||..|-
T Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~~~~~~~~  318 (353)
T cd07850         263 FEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQHPYINVWY  318 (353)
T ss_pred             hhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcChhHhhcc
Confidence            1111000      0011223467789999999999999999999999999998653

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=2.1e-31  Score=217.46  Aligned_cols=160  Identities=23%  Similarity=0.282  Sum_probs=129.6

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecC---cCcccCcCCCcccchHHhhhcC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRAN---KQFAEEIQTRQYRAPEVILRAG   79 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~---~~~~~~~~~~~~~~PE~~~~~~   79 (237)
                      +++.++..++.|++.||.|+|..+++||||||+||+++.++.++|+|||++....   .......|++.|+|||++.+..
T Consensus        90 ~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~  169 (312)
T cd05585          90 FDLSRARFYTAELLCALENLHKFNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDDKTNTFCGTPEYLAPELLLGHG  169 (312)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEECCCCcEEEEECcccccCccCCCccccccCCcccCCHHHHcCCC
Confidence            5788899999999999999999999999999999999999999999999986432   1223456899999999999888


Q ss_pred             CCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCc
Q 026540           80 YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWS  159 (237)
Q Consensus        80 ~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (237)
                      ++.++|+||+||+++++++|..||....      .......+                                      
T Consensus       170 ~~~~~DvwslGvil~el~tg~~pf~~~~------~~~~~~~~--------------------------------------  205 (312)
T cd05585         170 YTKAVDWWTLGVLLYEMLTGLPPFYDEN------VNEMYRKI--------------------------------------  205 (312)
T ss_pred             CCCccceechhHHHHHHHhCCCCcCCCC------HHHHHHHH--------------------------------------
Confidence            9999999999999999999999997542      11111110                                      


Q ss_pred             hhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCC---CHHHHhcCCCcCcccC
Q 026540          160 LDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRP---TAQQCLQHPWLSLRNS  210 (237)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~---t~~ell~hp~f~~~~~  210 (237)
                          .......+...+..+.+|+.+||+.||.+|+   ++.+++.||||.....
T Consensus       206 ----~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~hp~~~~~~~  255 (312)
T cd05585         206 ----LQEPLRFPDGFDRDAKDLLIGLLSRDPTRRLGYNGAQEIKNHPFFSQLSW  255 (312)
T ss_pred             ----HcCCCCCCCcCCHHHHHHHHHHcCCCHHHcCCCCCHHHHHcCCCcCCCCH
Confidence                1111223445577889999999999999997   5899999999997643

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>PHA03207 serine/threonine kinase US3; Provisional

Probab=99.97  E-value=4.8e-31  Score=221.68  Aligned_cols=196  Identities=16%  Similarity=0.199  Sum_probs=141.0

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC-----cccCcCCCcccchHHhhh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ-----FAEEIQTRQYRAPEVILR   77 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~-----~~~~~~~~~~~~PE~~~~   77 (237)
                      +++.++..++.|++.||.|+|..+++||||||+|||++.++.++|+|||++......     .....|++.|++||++.+
T Consensus       182 l~~~~~~~i~~ql~~aL~~LH~~givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  261 (392)
T PHA03207        182 LPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFLDEPENAVLGDFGAACKLDAHPDTPQCYGWSGTLETNSPELLAL  261 (392)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEccCccccccCcccccccccccccccCccCHhHhcC
Confidence            678899999999999999999999999999999999999999999999998654322     123468999999999988


Q ss_pred             cCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCC-chhhhcccCccchhcccc
Q 026540           78 AGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQ-SKDYFDRHGDLKRIRRLK  156 (237)
Q Consensus        78 ~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~  156 (237)
                      ..++.++|+||+||+++++++|..||.+....   .....+..+.+.++..+..+...... ....+....   ... ..
T Consensus       262 ~~~~~~~DvwslGvil~el~~g~~pf~~~~~~---~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~~  334 (392)
T PHA03207        262 DPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVK---SSSSQLRSIIRCMQVHPLEFPQNGSTNLCKHFKQYA---IVL-RP  334 (392)
T ss_pred             CCCCchhhHHHHHHHHHHHHHCCCCCCCCCCC---CcHHHHHHHHHHhccCccccCCccchhHHHHHHhhc---ccc-cC
Confidence            88999999999999999999999999876533   34566666666665544332211000 000000000   000 00


Q ss_pred             CCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccC
Q 026540          157 FWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNS  210 (237)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~  210 (237)
                      ........     .....+.++.+||.+||.+||.+|||+.++|.||||.....
T Consensus       335 ~~~~~~~~-----~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~p~f~~~~~  383 (392)
T PHA03207        335 PYTIPPVI-----RKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSLPLFTKEPI  383 (392)
T ss_pred             Cccccchh-----hccCcchhHHHHHHHHhccChhhCCCHHHHhhCchhhccch
Confidence            00000000     01123567889999999999999999999999999986544

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=99.97  E-value=2.2e-31  Score=218.03  Aligned_cols=160  Identities=19%  Similarity=0.290  Sum_probs=129.7

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecC---cCcccCcCCCcccchHHhhhcC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRAN---KQFAEEIQTRQYRAPEVILRAG   79 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~---~~~~~~~~~~~~~~PE~~~~~~   79 (237)
                      +++.++..++.|++.||.|+|..+++||||||+||+++.++.++|+|||++....   .......|++.|+|||++.+..
T Consensus        93 l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~  172 (320)
T cd05590          93 FDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGKTTSTFCGTPDYIAPEILQEML  172 (320)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCCCcccccccCccccCHHHHcCCC
Confidence            5788999999999999999999999999999999999999999999999876432   2233456899999999998888


Q ss_pred             CCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCc
Q 026540           80 YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWS  159 (237)
Q Consensus        80 ~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (237)
                      ++.++|+||+|++++++++|..||.+.+      .......+..                                    
T Consensus       173 ~~~~~DiwslG~il~el~~g~~Pf~~~~------~~~~~~~i~~------------------------------------  210 (320)
T cd05590         173 YGPSVDWWAMGVLLYEMLCGHAPFEAEN------EDDLFEAILN------------------------------------  210 (320)
T ss_pred             CCCccchhhhHHHHHHHhhCCCCCCCCC------HHHHHHHHhc------------------------------------
Confidence            9999999999999999999999997653      2222211110                                    


Q ss_pred             hhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCH------HHHhcCCCcCcccC
Q 026540          160 LDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTA------QQCLQHPWLSLRNS  210 (237)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~------~ell~hp~f~~~~~  210 (237)
                            .....+...+.++.+|+.+||+.||.+|+++      +++++||||....+
T Consensus       211 ------~~~~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~~~~h~~f~~~~~  261 (320)
T cd05590         211 ------DEVVYPTWLSQDAVDILKAFMTKNPTMRLGSLTLGGEEAILRHPFFKELDW  261 (320)
T ss_pred             ------CCCCCCCCCCHHHHHHHHHHcccCHHHCCCCCCCCCHHHHHcCCCcCCCCH
Confidence                  0111223346788999999999999999998      99999999987654

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=99.97  E-value=2.2e-31  Score=218.76  Aligned_cols=160  Identities=23%  Similarity=0.311  Sum_probs=129.7

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecC---cCcccCcCCCcccchHHhhhcC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRAN---KQFAEEIQTRQYRAPEVILRAG   79 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~---~~~~~~~~~~~~~~PE~~~~~~   79 (237)
                      +++.++..++.|++.||+|+|..+++||||||+|||++.++.+||+|||++....   .......|++.|+|||++.+..
T Consensus        92 l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~  171 (328)
T cd05593          92 FSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAATMKTFCGTPEYLAPEVLEDND  171 (328)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEECCCCcEEEecCcCCccCCCcccccccccCCcCccChhhhcCCC
Confidence            5788999999999999999999999999999999999999999999999886432   2223456899999999998888


Q ss_pred             CCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCc
Q 026540           80 YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWS  159 (237)
Q Consensus        80 ~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (237)
                      ++.++|+||+||+++++++|..||....      .......+                                      
T Consensus       172 ~~~~~DiwslGvil~elltG~~Pf~~~~------~~~~~~~~--------------------------------------  207 (328)
T cd05593         172 YGRAVDWWGLGVVMYEMMCGRLPFYNQD------HEKLFELI--------------------------------------  207 (328)
T ss_pred             CCccCCccccchHHHHHhhCCCCCCCCC------HHHHHHHh--------------------------------------
Confidence            9999999999999999999999996542      11111110                                      


Q ss_pred             hhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCC-----CHHHHhcCCCcCcccC
Q 026540          160 LDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRP-----TAQQCLQHPWLSLRNS  210 (237)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~-----t~~ell~hp~f~~~~~  210 (237)
                          ......++...+.++.+||.+||+.||.+|+     +++|+++||||...++
T Consensus       208 ----~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~~~~  259 (328)
T cd05593         208 ----LMEDIKFPRTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRHSFFTGVNW  259 (328)
T ss_pred             ----ccCCccCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcCCCcCCCCH
Confidence                0011122344577889999999999999997     8999999999987543

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.97  E-value=1.1e-30  Score=197.37  Aligned_cols=194  Identities=21%  Similarity=0.267  Sum_probs=150.9

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecC-------cCcccCcCCCcccchHH
Q 026540            2 TIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRAN-------KQFAEEIQTRQYRAPEV   74 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~-------~~~~~~~~~~~~~~PE~   74 (237)
                      .++..++.+++++++.||.|+|...|.|||+|+.|+||+.++.++|+|||+++.+.       ..++.++.|.+|++||.
T Consensus       120 r~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLIt~dgilklADFGlar~fs~~~n~~kprytnrvvTLwYrppEl  199 (376)
T KOG0669|consen  120 RFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLITKDGILKLADFGLARAFSTSKNVVKPRYTNRVVTLWYRPPEL  199 (376)
T ss_pred             cccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEEcCCceEEeeccccccceecccccCCCCcccceeeeecCCHHH
Confidence            45678899999999999999999999999999999999999999999999986543       33556677999999999


Q ss_pred             hhhc-CCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhc
Q 026540           75 ILRA-GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIR  153 (237)
Q Consensus        75 ~~~~-~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (237)
                      +.+. .++++.|+|+.||++.+|++|++.+.+.+      +..++..+....|.....+|+......-|-...-     +
T Consensus       200 lLG~r~yg~~iDiWgAgCimaeMwtrspimqgnt------eqqql~~Is~LcGs~tkevWP~~d~lpL~~sie~-----e  268 (376)
T KOG0669|consen  200 LLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNT------EQQQLHLISQLCGSITKEVWPNVDNLPLYQSIEL-----E  268 (376)
T ss_pred             hhcccccCCcchhHhHHHHHHHHHccCccccCCh------HHHHHHHHHHHhccCCcccCCCcccchHHHhccC-----C
Confidence            9986 59999999999999999999999998875      7788999999999888888776554433322100     0


Q ss_pred             cccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcc
Q 026540          154 RLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLR  208 (237)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~  208 (237)
                      ++.... .+.+.+... +-.-.++..+|+.++|.+||.+|+.+++++.|.||..-
T Consensus       269 Pl~~~~-~rkv~n~~k-p~~kd~~a~dLle~ll~~DP~kR~~ad~alnh~~F~kd  321 (376)
T KOG0669|consen  269 PLPKGQ-KRKVKNRLK-PYVKDDEALDLLEKLLKLDPTKRIDADQALNHDFFWKD  321 (376)
T ss_pred             CCCcch-hhhhhhhcc-cccCChhHHHHHHHHhccCcccCcchHhhhchhhhhcC
Confidence            011000 111111110 11124567899999999999999999999999999743

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=99.97  E-value=3.7e-31  Score=216.82  Aligned_cols=161  Identities=20%  Similarity=0.269  Sum_probs=130.5

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecC---cCcccCcCCCcccchHHhhhcC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRAN---KQFAEEIQTRQYRAPEVILRAG   79 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~---~~~~~~~~~~~~~~PE~~~~~~   79 (237)
                      +++.++..++.|++.||.|+|..+++||||||+||+++.++.++|+|||++....   .......|++.|+|||++.+..
T Consensus        93 ~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~  172 (321)
T cd05591          93 FDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGVTTTTFCGTPDYIAPEILQELE  172 (321)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeecccceecccCCccccccccCccccCHHHHcCCC
Confidence            5788899999999999999999999999999999999999999999999886432   2223446789999999998888


Q ss_pred             CCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCc
Q 026540           80 YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWS  159 (237)
Q Consensus        80 ~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (237)
                      ++.++|+||+|++++++++|+.||...+      .......+..                                    
T Consensus       173 ~~~~~DvwslG~il~el~tg~~Pf~~~~------~~~~~~~i~~------------------------------------  210 (321)
T cd05591         173 YGPSVDWWALGVLMYEMMAGQPPFEADN------EDDLFESILH------------------------------------  210 (321)
T ss_pred             CCCccceechhHHHHHHhcCCCCCCCCC------HHHHHHHHHc------------------------------------
Confidence            9999999999999999999999997653      2222222111                                    


Q ss_pred             hhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCC-------CHHHHhcCCCcCcccCC
Q 026540          160 LDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRP-------TAQQCLQHPWLSLRNST  211 (237)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~-------t~~ell~hp~f~~~~~~  211 (237)
                            .....+...+.++.+++.+||+.||.+|+       +++++++||||...++.
T Consensus       211 ------~~~~~p~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~hp~~~~~~~~  263 (321)
T cd05591         211 ------DDVLYPVWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQHPFFKEIDWV  263 (321)
T ss_pred             ------CCCCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcCCccCCCCHH
Confidence                  01112233467889999999999999999       99999999999876544

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=99.97  E-value=3.6e-31  Score=216.41  Aligned_cols=161  Identities=21%  Similarity=0.268  Sum_probs=129.2

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecC---cCcccCcCCCcccchHHhhhcC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRAN---KQFAEEIQTRQYRAPEVILRAG   79 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~---~~~~~~~~~~~~~~PE~~~~~~   79 (237)
                      +++.++..++.|++.||+|+|..+++||||||+||+++.++.++|+|||++....   .......|++.|+|||++.+..
T Consensus        93 ~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~  172 (316)
T cd05620          93 FDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDNRASTFCGTPDYIAPEILQGLK  172 (316)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEeCccCCCeecccCCCceeccCCCcCccCHHHHcCCC
Confidence            5778899999999999999999999999999999999999999999999875421   2233457899999999999888


Q ss_pred             CCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCc
Q 026540           80 YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWS  159 (237)
Q Consensus        80 ~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (237)
                      ++.++|+||+|++++++++|..||.+..      .......+..                                    
T Consensus       173 ~~~~~DiwslGvil~el~~g~~Pf~~~~------~~~~~~~~~~------------------------------------  210 (316)
T cd05620         173 YTFSVDWWSFGVLLYEMLIGQSPFHGDD------EDELFESIRV------------------------------------  210 (316)
T ss_pred             CCcccchhhhHHHHHHHHhCCCCCCCCC------HHHHHHHHHh------------------------------------
Confidence            9999999999999999999999997542      2111111100                                    


Q ss_pred             hhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCH-HHHhcCCCcCcccCC
Q 026540          160 LDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTA-QQCLQHPWLSLRNST  211 (237)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~-~ell~hp~f~~~~~~  211 (237)
                            .....+...+.++.+|+.+||+.||.+|+++ +++++||||...++.
T Consensus       211 ------~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~~~~~~h~~f~~~~~~  257 (316)
T cd05620         211 ------DTPHYPRWITKESKDILEKLFERDPTRRLGVVGNIRGHPFFKTINWT  257 (316)
T ss_pred             ------CCCCCCCCCCHHHHHHHHHHccCCHHHcCCChHHHHcCCCcCCCCHH
Confidence                  0111223346778899999999999999997 589999999986543

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=99.97  E-value=2.6e-31  Score=218.10  Aligned_cols=161  Identities=23%  Similarity=0.308  Sum_probs=129.6

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhh-hcCCccCCCCCccccCCCCcEEEeecCcceecC---cCcccCcCCCcccchHHhhhc
Q 026540            3 IVEKKLKRRAKRAVANISIRRA-SMGGIELPKPERCLDGIDMRCKVVDFGNACRAN---KQFAEEIQTRQYRAPEVILRA   78 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~-~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~---~~~~~~~~~~~~~~PE~~~~~   78 (237)
                      +++.++..++.|++.||.|+|+ .+++||||||+|||++.++.+||+|||++....   .......|++.|+|||++.+.
T Consensus        92 l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  171 (325)
T cd05594          92 FSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDN  171 (325)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEECCCCCEEEecCCCCeecCCCCcccccccCCcccCCHHHHccC
Confidence            5788999999999999999997 799999999999999999999999999875422   222345689999999999888


Q ss_pred             CCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCC
Q 026540           79 GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFW  158 (237)
Q Consensus        79 ~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (237)
                      .++.++|+||+|++++++++|..||....      .......+                                     
T Consensus       172 ~~~~~~DiwslG~il~el~tG~~Pf~~~~------~~~~~~~i-------------------------------------  208 (325)
T cd05594         172 DYGRAVDWWGLGVVMYEMMCGRLPFYNQD------HEKLFELI-------------------------------------  208 (325)
T ss_pred             CCCCccccccccceeeeeccCCCCCCCCC------HHHHHHHH-------------------------------------
Confidence            89999999999999999999999997542      11111111                                     


Q ss_pred             chhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCC-----CHHHHhcCCCcCcccCC
Q 026540          159 SLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRP-----TAQQCLQHPWLSLRNST  211 (237)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~-----t~~ell~hp~f~~~~~~  211 (237)
                           .......+...+.++.+|+.+||+.||++|+     ++.++++||||.+..+.
T Consensus       209 -----~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~~~~~  261 (325)
T cd05594         209 -----LMEEIRFPRTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQHKFFAGIVWQ  261 (325)
T ss_pred             -----hcCCCCCCCCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcCCCcCCCCHH
Confidence                 0011122344567889999999999999997     89999999999976433

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=99.97  E-value=3.6e-30  Score=207.13  Aligned_cols=185  Identities=25%  Similarity=0.314  Sum_probs=136.9

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC---cccCcCCCcccchHHhhhcC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ---FAEEIQTRQYRAPEVILRAG   79 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~~~~PE~~~~~~   79 (237)
                      ++++.+..++.|++.||.|+|..+++|+||||+||+++.++.++|+|||++......   .....++..|++||.+.+..
T Consensus        96 ~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  175 (284)
T cd07839          96 IDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAK  175 (284)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEcCCCcEEECccchhhccCCCCCCcCCCccccCCcChHHHhCCc
Confidence            678899999999999999999999999999999999999999999999988654322   23345678899999987754


Q ss_pred             -CCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCC
Q 026540           80 -YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFW  158 (237)
Q Consensus        80 -~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (237)
                       ++.++|+||+|++++++++|..|+....     .....+..+.+..+..+...+........+ ......         
T Consensus       176 ~~~~~~DiwslG~il~~l~tg~~p~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~---------  240 (284)
T cd07839         176 LYSTSIDMWSAGCIFAELANAGRPLFPGN-----DVDDQLKRIFRLLGTPTEESWPGVSKLPDY-KPYPMY---------  240 (284)
T ss_pred             ccCcHHHHHHHHHHHHHHHhcCCCCcCCC-----CHHHHHHHHHHHhCCCChHHhHHhhhcccc-cccCCC---------
Confidence             6889999999999999999988865443     345666667777666655443322111111 000000         


Q ss_pred             chhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCc
Q 026540          159 SLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL  205 (237)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f  205 (237)
                      +...   .........+.++.+|+.+||+.||.+|||+++++.||||
T Consensus       241 ~~~~---~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h~~f  284 (284)
T cd07839         241 PATT---SLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQHPYF  284 (284)
T ss_pred             CCcc---hhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcCCCC
Confidence            0000   0001122356788999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.97  E-value=2.1e-30  Score=214.27  Aligned_cols=163  Identities=25%  Similarity=0.300  Sum_probs=133.8

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCC----CcEEEeecCcceecCc--CcccCcCCCcccchHHhh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGID----MRCKVVDFGNACRANK--QFAEEIQTRQYRAPEVIL   76 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~----~~~kl~dfg~~~~~~~--~~~~~~~~~~~~~PE~~~   76 (237)
                      ++|..++.+++|+++++.|+|+.+++|||+||+|+|+...    +.++++|||++.....  .....+||+.|+|||++.
T Consensus       132 ~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~~~~~~~~~~Gtp~y~APEvl~  211 (382)
T KOG0032|consen  132 YSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFIKPGERLHTIVGTPEYVAPEVLG  211 (382)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeeccccCCCCcEEEeeCCCceEccCCceEeeecCCccccCchhhc
Confidence            6899999999999999999999999999999999999653    4799999999976654  566789999999999999


Q ss_pred             hcCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcccc
Q 026540           77 RAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLK  156 (237)
Q Consensus        77 ~~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (237)
                      +.+|+..+|+||+|+++|.|++|..||.+.+      +......+.+.-  +        .                   
T Consensus       212 ~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~------~~~~~~~i~~~~--~--------~-------------------  256 (382)
T KOG0032|consen  212 GRPYGDEVDVWSIGVILYILLSGVPPFWGET------EFEIFLAILRGD--F--------D-------------------  256 (382)
T ss_pred             CCCCCcccchhHHHHHHHHHhhCCCCCcCCC------hhHHHHHHHcCC--C--------C-------------------
Confidence            9999999999999999999999999998774      111111111100  0        0                   


Q ss_pred             CCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCccc
Q 026540          157 FWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRN  209 (237)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~  209 (237)
                               -.....+..+..+.+|+.+||..||.+|+|+.++|+|||+....
T Consensus       257 ---------f~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~HpWi~~~~  300 (382)
T KOG0032|consen  257 ---------FTSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQHPWIKSIG  300 (382)
T ss_pred             ---------CCCCCccccCHHHHHHHHHhcccCcccCCCHHHHhcCccccCCc
Confidence                     01112334578899999999999999999999999999999763

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=99.97  E-value=8.3e-31  Score=215.00  Aligned_cols=160  Identities=21%  Similarity=0.281  Sum_probs=130.1

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecC---cCcccCcCCCcccchHHhhhcC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRAN---KQFAEEIQTRQYRAPEVILRAG   79 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~---~~~~~~~~~~~~~~PE~~~~~~   79 (237)
                      +++.++..++.|++.||+|+|..+++||||||+||+++.++.+||+|||++....   .......|++.|+|||.+.+..
T Consensus        98 l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~  177 (324)
T cd05589          98 FSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGFGDRTSTFCGTPEFLAPEVLTETS  177 (324)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCcEEeCcccCCccCCCCCCcccccccCccccCHhHhcCCC
Confidence            6788999999999999999999999999999999999999999999999875422   2233456889999999998888


Q ss_pred             CCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCc
Q 026540           80 YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWS  159 (237)
Q Consensus        80 ~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (237)
                      ++.++|+||+|++++++++|..||.+.+      .......+                                      
T Consensus       178 ~~~~~DiwslG~il~el~~G~~pf~~~~------~~~~~~~i--------------------------------------  213 (324)
T cd05589         178 YTRAVDWWGLGVLIYEMLVGESPFPGDD------EEEVFDSI--------------------------------------  213 (324)
T ss_pred             CCcccchhhHHHHHHHHHhCCCCCCCCC------HHHHHHHH--------------------------------------
Confidence            9999999999999999999999997552      21111111                                      


Q ss_pred             hhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCC-----CHHHHhcCCCcCcccC
Q 026540          160 LDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRP-----TAQQCLQHPWLSLRNS  210 (237)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~-----t~~ell~hp~f~~~~~  210 (237)
                          .......+..++..+.++|.+||+.||.+||     ++.++++||||.....
T Consensus       214 ----~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~~~f~~~~~  265 (324)
T cd05589         214 ----VNDEVRYPRFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKKQPFFRDINW  265 (324)
T ss_pred             ----HhCCCCCCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhCCCcCCCCH
Confidence                1111122334567888999999999999999     6999999999987643

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=99.97  E-value=1.9e-30  Score=208.72  Aligned_cols=165  Identities=20%  Similarity=0.218  Sum_probs=130.4

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC---cccCcCCCcccchHHhhhcC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ---FAEEIQTRQYRAPEVILRAG   79 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~~~~PE~~~~~~   79 (237)
                      +++.++..++.|++.||.|+|+.+++||||||+||+++.++.++|+|||++......   .....+++.|++||.+.+..
T Consensus        94 l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~  173 (280)
T cd05608          94 FPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSKTKGYAGTPGFMAPELLQGEE  173 (280)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCccceecCCCCccccccCCCcCccCHHHhcCCC
Confidence            678999999999999999999999999999999999999999999999998654322   22346788999999999888


Q ss_pred             CCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCc
Q 026540           80 YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWS  159 (237)
Q Consensus        80 ~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (237)
                      ++.++|+||+|++++++++|..||......      .........                                   
T Consensus       174 ~~~~~DvwslG~il~el~~g~~pf~~~~~~------~~~~~~~~~-----------------------------------  212 (280)
T cd05608         174 YDFSVDYFALGVTLYEMIAARGPFRARGEK------VENKELKQR-----------------------------------  212 (280)
T ss_pred             CCccccHHHHHHHHHHHHhCCCCCCCCCcc------hhHHHHHHh-----------------------------------
Confidence            999999999999999999999999754311      000000000                                   


Q ss_pred             hhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCC-----CHHHHhcCCCcCcccCC
Q 026540          160 LDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRP-----TAQQCLQHPWLSLRNST  211 (237)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~-----t~~ell~hp~f~~~~~~  211 (237)
                         ........+...+..+.+++.+||+.||++|+     +++++++||||++..+.
T Consensus       213 ---~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h~~~~~~~~~  266 (280)
T cd05608         213 ---ILNDSVTYPDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTHPLFRDLNWR  266 (280)
T ss_pred             ---hcccCCCCcccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcChhhhcCCHh
Confidence               00001122334567889999999999999999     88999999999986544

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=99.97  E-value=8e-31  Score=215.09  Aligned_cols=160  Identities=20%  Similarity=0.241  Sum_probs=129.2

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecC---cCcccCcCCCcccchHHhhhcC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRAN---KQFAEEIQTRQYRAPEVILRAG   79 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~---~~~~~~~~~~~~~~PE~~~~~~   79 (237)
                      +++.++..++.|++.||.|+|..+++||||||+|||++.++.++|+|||++....   .......|++.|+|||++.+..
T Consensus        98 ~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~  177 (324)
T cd05587          98 FKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGGKTTRTFCGTPDYIAPEIIAYQP  177 (324)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEcCCCCEEEeecCcceecCCCCCceeeecCCccccChhhhcCCC
Confidence            5788999999999999999999999999999999999999999999999875421   2223456899999999999888


Q ss_pred             CCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCc
Q 026540           80 YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWS  159 (237)
Q Consensus        80 ~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (237)
                      ++.++|+||+||+++++++|+.||.+..      .......+..                                    
T Consensus       178 ~~~~~DiwslGvil~elltG~~pf~~~~------~~~~~~~i~~------------------------------------  215 (324)
T cd05587         178 YGKSVDWWAFGVLLYEMLAGQPPFDGED------EDELFQSIME------------------------------------  215 (324)
T ss_pred             CCcccchhhhHHHHHHHHhCCCCCCCCC------HHHHHHHHHc------------------------------------
Confidence            9999999999999999999999997542      2222221110                                    


Q ss_pred             hhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCH-----HHHhcCCCcCcccC
Q 026540          160 LDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTA-----QQCLQHPWLSLRNS  210 (237)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~-----~ell~hp~f~~~~~  210 (237)
                            .....+...+..+.+++.+||+.||.+|+++     +++++||||...++
T Consensus       216 ------~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~hp~~~~~~~  265 (324)
T cd05587         216 ------HNVSYPKSLSKEAVSICKGLLTKHPAKRLGCGPTGERDIREHAFFRRIDW  265 (324)
T ss_pred             ------CCCCCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCCcCCCCH
Confidence                  0111233346778899999999999999976     89999999997654

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.97  E-value=1.7e-30  Score=187.58  Aligned_cols=188  Identities=24%  Similarity=0.321  Sum_probs=149.3

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCc---CcccCcCCCcccchHHhhhcC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK---QFAEEIQTRQYRAPEVILRAG   79 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~---~~~~~~~~~~~~~PE~~~~~~   79 (237)
                      +..+-++.++.|+++||.++|+++..|||+||+|.||+.+|.+|++|||+++.++-   +++..+-|.+|++|.++.+..
T Consensus        98 ~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnllin~ngelkladfglarafgipvrcysaevvtlwyrppdvlfgak  177 (292)
T KOG0662|consen   98 LDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAK  177 (292)
T ss_pred             CCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEeccCCcEEecccchhhhcCCceEeeeceeeeeeccCcceeeeee
Confidence            45667889999999999999999999999999999999999999999999987664   445557799999999999986


Q ss_pred             -CCchhhhhhhhhHHHHHhc-CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccC
Q 026540           80 -YSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKF  157 (237)
Q Consensus        80 -~~~~~diws~g~~l~~~~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (237)
                       |+.+.|+||.||++.|+.. |.++|.+.      +-.+++.++++.+|.+.+..|++.....+|.          ..+.
T Consensus       178 ly~tsidmwsagcifaelanagrplfpg~------dvddqlkrif~~lg~p~ed~wps~t~lpdyk----------~yp~  241 (292)
T KOG0662|consen  178 LYSTSIDMWSAGCIFAELANAGRPLFPGN------DVDDQLKRIFRLLGTPTEDQWPSMTKLPDYK----------PYPI  241 (292)
T ss_pred             hhccchHhhhcchHHHHHhhcCCCCCCCC------cHHHHHHHHHHHhCCCccccCCccccCCCCc----------ccCC
Confidence             7999999999999999985 66777665      4678999999999999988887666554331          1111


Q ss_pred             CchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCccc
Q 026540          158 WSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRN  209 (237)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~  209 (237)
                      ++.....   .+.-......-++++.++|.-+|.+|++++.+++||||....
T Consensus       242 ypattsw---sqivp~lns~grdllqkll~cnp~qrisaeaalqhpyf~d~s  290 (292)
T KOG0662|consen  242 YPATTSW---SQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQHPYFSDFS  290 (292)
T ss_pred             ccccchH---HHHhhhhcchhHHHHHHHhccCcccccCHHHHhcCccccccC
Confidence            1111100   011122344567899999999999999999999999998654

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=99.97  E-value=5.7e-31  Score=215.89  Aligned_cols=160  Identities=23%  Similarity=0.321  Sum_probs=130.0

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecC---cCcccCcCCCcccchHHhhhcC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRAN---KQFAEEIQTRQYRAPEVILRAG   79 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~---~~~~~~~~~~~~~~PE~~~~~~   79 (237)
                      +++.++..++.|++.||.|+|..+++||||||+|||++.++.++|+|||++....   .......|++.|+|||.+.+..
T Consensus        92 ~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~  171 (323)
T cd05595          92 FTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDND  171 (323)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEcCCCCEEecccHHhccccCCCCccccccCCcCcCCcccccCCC
Confidence            5788999999999999999999999999999999999999999999999875422   1223456889999999998888


Q ss_pred             CCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCc
Q 026540           80 YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWS  159 (237)
Q Consensus        80 ~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (237)
                      ++.++|+||+||+++++++|..||....      .......+                                      
T Consensus       172 ~~~~~DiwSlGvil~ell~g~~Pf~~~~------~~~~~~~~--------------------------------------  207 (323)
T cd05595         172 YGRAVDWWGLGVVMYEMMCGRLPFYNQD------HERLFELI--------------------------------------  207 (323)
T ss_pred             CCchhchhhhHHHHHHHHhCCCCCCCCC------HHHHHHHH--------------------------------------
Confidence            9999999999999999999999997542      11111111                                      


Q ss_pred             hhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCC-----CHHHHhcCCCcCcccC
Q 026540          160 LDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRP-----TAQQCLQHPWLSLRNS  210 (237)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~-----t~~ell~hp~f~~~~~  210 (237)
                          .......+..+++++.+||.+||+.||.+|+     ++.++++|+||....+
T Consensus       208 ----~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h~~~~~~~~  259 (323)
T cd05595         208 ----LMEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINW  259 (323)
T ss_pred             ----hcCCCCCCCCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHcCCCcCCCCH
Confidence                0011123344577889999999999999998     8999999999997653

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=99.97  E-value=1.7e-30  Score=213.54  Aligned_cols=169  Identities=18%  Similarity=0.235  Sum_probs=130.4

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecC---cCcccCcCCCcccchHHhhhcC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRAN---KQFAEEIQTRQYRAPEVILRAG   79 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~---~~~~~~~~~~~~~~PE~~~~~~   79 (237)
                      +.+..+..++.|++.||.|+|..+++||||||+||+++.++.++|+|||++....   .......|+..|+|||++.+..
T Consensus        93 l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~  172 (329)
T cd05618          93 LPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGED  172 (329)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCCEEEeeCCccccccCCCCccccccCCccccCHHHHcCCC
Confidence            6788999999999999999999999999999999999999999999999885421   2233457899999999999888


Q ss_pred             CCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCc
Q 026540           80 YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWS  159 (237)
Q Consensus        80 ~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (237)
                      ++.++|+||+|++++++++|..||........ ........+                                      
T Consensus       173 ~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~-~~~~~~~~~--------------------------------------  213 (329)
T cd05618         173 YGFSVDWWALGVLMFEMMAGRSPFDIVGSSDN-PDQNTEDYL--------------------------------------  213 (329)
T ss_pred             CCCccceecccHHHHHHhhCCCCCccCCCcCC-cccccHHHH--------------------------------------
Confidence            99999999999999999999999964321100 000000000                                      


Q ss_pred             hhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCC------HHHHhcCCCcCcccC
Q 026540          160 LDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPT------AQQCLQHPWLSLRNS  210 (237)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t------~~ell~hp~f~~~~~  210 (237)
                      ...........+...+..+.++|.+||+.||.+|++      +.++++||||...++
T Consensus       214 ~~~i~~~~~~~p~~~~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~hp~f~~~~~  270 (329)
T cd05618         214 FQVILEKQIRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDW  270 (329)
T ss_pred             HHHHhcCCCCCCCCCCHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhcCCCCCCCCH
Confidence            001111122344556778899999999999999998      589999999987654

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=99.97  E-value=1.5e-30  Score=214.10  Aligned_cols=164  Identities=22%  Similarity=0.213  Sum_probs=127.9

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCc----CcccCcCCCcccchHHhhhc
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK----QFAEEIQTRQYRAPEVILRA   78 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~----~~~~~~~~~~~~~PE~~~~~   78 (237)
                      +++.++..++.|++.||.|+|..+++||||||+|||++.++.++|+|||++.....    ......|+..|+|||.+.+.
T Consensus       102 ~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  181 (332)
T cd05614         102 FSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLDSEGHVVLTDFGLSKEFLSEEKERTYSFCGTIEYMAPEIIRGK  181 (332)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEECCCCCEEEeeCcCCccccccCCCccccccCCccccCHHHhcCC
Confidence            67889999999999999999999999999999999999999999999999864321    12234689999999999865


Q ss_pred             -CCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccC
Q 026540           79 -GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKF  157 (237)
Q Consensus        79 -~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (237)
                       .++.++|+||+|++++++++|..||......   ......   .+.                                 
T Consensus       182 ~~~~~~~DiwslG~il~elltg~~pf~~~~~~---~~~~~~---~~~---------------------------------  222 (332)
T cd05614         182 GGHGKAVDWWSLGILIFELLTGASPFTLEGER---NTQSEV---SRR---------------------------------  222 (332)
T ss_pred             CCCCCccccccchhhhhhhhcCCCCCCCCCCC---CCHHHH---HHH---------------------------------
Confidence             4788999999999999999999999654211   000000   000                                 


Q ss_pred             CchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCC-----CHHHHhcCCCcCcccC
Q 026540          158 WSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRP-----TAQQCLQHPWLSLRNS  210 (237)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~-----t~~ell~hp~f~~~~~  210 (237)
                           ........+...+..+.+|+.+||+.||++|+     +++++++||||.....
T Consensus       223 -----~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~~~~  275 (332)
T cd05614         223 -----ILKCDPPFPSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEHPFFKGLDW  275 (332)
T ss_pred             -----HhcCCCCCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcCCCcCCCCH
Confidence                 00011122334567889999999999999999     8899999999997543

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=99.97  E-value=8.6e-31  Score=214.79  Aligned_cols=160  Identities=19%  Similarity=0.235  Sum_probs=130.1

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecC---cCcccCcCCCcccchHHhhhcC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRAN---KQFAEEIQTRQYRAPEVILRAG   79 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~---~~~~~~~~~~~~~~PE~~~~~~   79 (237)
                      +++.++..++.|++.||.|+|..+++||||||+|||++.++.++|+|||++....   .......|++.|+|||++.+..
T Consensus        98 ~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~  177 (323)
T cd05616          98 FKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDGVTTKTFCGTPDYIAPEIIAYQP  177 (323)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEECCCCcEEEccCCCceecCCCCCccccCCCChhhcCHHHhcCCC
Confidence            5788999999999999999999999999999999999999999999999986432   2233456899999999999888


Q ss_pred             CCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCc
Q 026540           80 YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWS  159 (237)
Q Consensus        80 ~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (237)
                      ++.++|+||+||+++++++|+.||.+..      .......+.+                                    
T Consensus       178 ~~~~~DiwSlGvil~elltg~~Pf~~~~------~~~~~~~i~~------------------------------------  215 (323)
T cd05616         178 YGKSVDWWAFGVLLYEMLAGQAPFEGED------EDELFQSIME------------------------------------  215 (323)
T ss_pred             CCCccchhchhHHHHHHHhCCCCCCCCC------HHHHHHHHHh------------------------------------
Confidence            9999999999999999999999997652      2222221111                                    


Q ss_pred             hhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCC-----HHHHhcCCCcCcccC
Q 026540          160 LDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPT-----AQQCLQHPWLSLRNS  210 (237)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t-----~~ell~hp~f~~~~~  210 (237)
                            .....+...+.++.+++.+||+.||.+|++     .+++++||||...++
T Consensus       216 ------~~~~~p~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~~~~~~~  265 (323)
T cd05616         216 ------HNVAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDW  265 (323)
T ss_pred             ------CCCCCCCcCCHHHHHHHHHHcccCHHhcCCCCCCCHHHHhcCCCcCCCCH
Confidence                  011223345678899999999999999998     489999999987654

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>PHA03210 serine/threonine kinase US3; Provisional

Probab=99.97  E-value=2.5e-30  Score=223.28  Aligned_cols=192  Identities=19%  Similarity=0.198  Sum_probs=131.6

Q ss_pred             HHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC----cccCcCCCcccchHHhhhcCC
Q 026540            5 EKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ----FAEEIQTRQYRAPEVILRAGY   80 (237)
Q Consensus         5 ~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~----~~~~~~~~~~~~PE~~~~~~~   80 (237)
                      ..++..++.|++.||.|+|+.+++||||||+|||++.++.+||+|||++......    .....|+..|++||++.+..+
T Consensus       266 ~~~~~~i~~ql~~aL~yLH~~gIiHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~  345 (501)
T PHA03210        266 LKQTRAIMKQLLCAVEYIHDKKLIHRDIKLENIFLNCDGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGY  345 (501)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCC
Confidence            4678889999999999999999999999999999999999999999998654422    123478999999999998889


Q ss_pred             CchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCch
Q 026540           81 SFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSL  160 (237)
Q Consensus        81 ~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (237)
                      +.++|+||+||++++|++|..++......   ....++..+...++.....+.........+..... ...    .....
T Consensus       346 ~~~~DiwSlGvil~ell~~~~~p~~~~~~---~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~-~~~----~~~~~  417 (501)
T PHA03210        346 CEITDIWSCGLILLDMLSHDFCPIGDGGG---KPGKQLLKIIDSLSVCDEEFPDPPCKLFDYIDSAE-IDH----AGHSV  417 (501)
T ss_pred             CcHHHHHHHHHHHHHHHHCCCCCccCCCC---CHHHHHHHHHHhcccChhhcCCcHHHHHHHhhhhh-ccc----Cccch
Confidence            99999999999999999987544332211   23444544444443322221100000001110000 000    00001


Q ss_pred             hHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCccc
Q 026540          161 DRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRN  209 (237)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~  209 (237)
                      ...+.     ....+..+.++|.+||++||.+|||+.|+|+||||....
T Consensus       418 ~~~~~-----~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~hp~f~~~~  461 (501)
T PHA03210        418 PPLIR-----NLGLPADFEYPLVKMLTFDWHLRPGAAELLALPLFSAEE  461 (501)
T ss_pred             hhHHH-----hcCCChHHHHHHHHHhccCcccCcCHHHHhhChhhhcCC
Confidence            11111     112356788999999999999999999999999998654

>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.97  E-value=3.1e-30  Score=197.58  Aligned_cols=146  Identities=21%  Similarity=0.282  Sum_probs=121.4

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhh--hc--CCccCCCCCccccCCCCcEEEeecCcceecCcC---cccCcCCCcccchHHh
Q 026540            3 IVEKKLKRRAKRAVANISIRRA--SM--GGIELPKPERCLDGIDMRCKVVDFGNACRANKQ---FAEEIQTRQYRAPEVI   75 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~--~~--~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~~~~PE~~   75 (237)
                      +.|+.+-+++.|++.||.++|+  ..  +.||||||.||+++.+|.+||+|||+++.+...   ....+|||+||+||.+
T Consensus       121 ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l~s~~tfA~S~VGTPyYMSPE~i  200 (375)
T KOG0591|consen  121 IPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFLSSKTTFAHSLVGTPYYMSPERI  200 (375)
T ss_pred             CchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhHhcchhHHHHhhcCCCcccCHHHH
Confidence            6789999999999999999999  66  779999999999999999999999999776543   4467999999999999


Q ss_pred             hhcCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccc
Q 026540           76 LRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRL  155 (237)
Q Consensus        76 ~~~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (237)
                      .+.+|+.++|+||+||+++||..-+.||.+.+       ...++.-                                  
T Consensus       201 ~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n-------~~~L~~K----------------------------------  239 (375)
T KOG0591|consen  201 HESGYNFKSDIWSLGCLLYEMCALQSPFYGDN-------LLSLCKK----------------------------------  239 (375)
T ss_pred             hcCCCCcchhHHHHHHHHHHHHhcCCCccccc-------HHHHHHH----------------------------------
Confidence            99999999999999999999999999998763       1222111                                  


Q ss_pred             cCCchhHHhhhhc-CCC-HHhHHHHHHHHHhccccCCCCCCCH
Q 026540          156 KFWSLDRLLVDKY-RFS-ETDAREFAEFLVPLLDFTPEKRPTA  196 (237)
Q Consensus       156 ~~~~~~~~~~~~~-~~~-~~~~~~~~~li~~~L~~dP~~R~t~  196 (237)
                             +.+..+ +.| +-.+.++..+|..|+..||..||+.
T Consensus       240 -------I~qgd~~~~p~~~YS~~l~~li~~ci~vd~~~RP~t  275 (375)
T KOG0591|consen  240 -------IEQGDYPPLPDEHYSTDLRELINMCIAVDPEQRPDT  275 (375)
T ss_pred             -------HHcCCCCCCcHHHhhhHHHHHHHHHccCCcccCCCc
Confidence                   111111 134 3457889999999999999999985

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=99.97  E-value=1.6e-30  Score=213.18  Aligned_cols=159  Identities=21%  Similarity=0.267  Sum_probs=128.4

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecC---cCcccCcCCCcccchHHhhhcC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRAN---KQFAEEIQTRQYRAPEVILRAG   79 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~---~~~~~~~~~~~~~~PE~~~~~~   79 (237)
                      +.+..+..++.|++.||.|+|..+++||||||+||+++.++.++|+|||++....   .......|++.|+|||.+.+..
T Consensus        97 ~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~  176 (323)
T cd05584          97 FMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEGTVTHTFCGTIEYMAPEILMRSG  176 (323)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEeeCcCCeecccCCCcccccCCCccccChhhccCCC
Confidence            4678888999999999999999999999999999999999999999999885422   1222346789999999998888


Q ss_pred             CCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCc
Q 026540           80 YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWS  159 (237)
Q Consensus        80 ~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (237)
                      ++.++|+||+|++++++++|..||....      .......+.                                     
T Consensus       177 ~~~~~DiwslG~il~ell~G~~pf~~~~------~~~~~~~~~-------------------------------------  213 (323)
T cd05584         177 HGKAVDWWSLGALMYDMLTGAPPFTAEN------RKKTIDKIL-------------------------------------  213 (323)
T ss_pred             CCCcceecccHHHHHHHhcCCCCCCCCC------HHHHHHHHH-------------------------------------
Confidence            8999999999999999999999997542      111111111                                     


Q ss_pred             hhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCC-----CHHHHhcCCCcCccc
Q 026540          160 LDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRP-----TAQQCLQHPWLSLRN  209 (237)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~-----t~~ell~hp~f~~~~  209 (237)
                           ......+...+..+.+||.+||+.||++|+     +++++++||||....
T Consensus       214 -----~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h~~~~~~~  263 (323)
T cd05584         214 -----KGKLNLPPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSHPFFRHVN  263 (323)
T ss_pred             -----cCCCCCCCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcCCCcCCCC
Confidence                 111122334567889999999999999999     899999999998654

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>PHA03209 serine/threonine kinase US3; Provisional

Probab=99.97  E-value=2.6e-30  Score=214.72  Aligned_cols=195  Identities=16%  Similarity=0.129  Sum_probs=131.4

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecC--cCcccCcCCCcccchHHhhhcCC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRAN--KQFAEEIQTRQYRAPEVILRAGY   80 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~--~~~~~~~~~~~~~~PE~~~~~~~   80 (237)
                      +++.++..++.|++.||.|+|..+++||||||+|||++.++.++|+|||++....  .......|+..|++||++.+..+
T Consensus       154 ~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~  233 (357)
T PHA03209        154 LPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFINDVDQVCIGDLGAAQFPVVAPAFLGLAGTVETNAPEVLARDKY  233 (357)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEecCccccccccCcccccccccccccCCeecCCCCC
Confidence            6788999999999999999999999999999999999999999999999986432  22234567899999999998889


Q ss_pred             CchhhhhhhhhHHHHHhcCCcccCCCCCCCC----CChHHHHHHHHHHHCCCCHHHHhc--CCCchhhhcccCccchhcc
Q 026540           81 SFSVDMWSFACTAFELATGDMLFAPKSGQGF----CEDEDHLALMMELIGKMPRKIAIG--GAQSKDYFDRHGDLKRIRR  154 (237)
Q Consensus        81 ~~~~diws~g~~l~~~~~g~~~f~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~  154 (237)
                      +.++|+||+||++|+++++..++........    .....++..+...++..+..+...  ......+..... .     
T Consensus       234 ~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-----  307 (357)
T PHA03209        234 NSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVHPEEFPRDPGSRLVRGFIEYAS-L-----  307 (357)
T ss_pred             CchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHHHHHhccChhhcCCCCccHHHHHHHhhcc-c-----
Confidence            9999999999999999986544433221110    012233444444444443332210  000000110000 0     


Q ss_pred             ccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCc
Q 026540          155 LKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSL  207 (237)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~  207 (237)
                       ...+.....   .......+..+.+||.+||++||.+|||++|+|+||||+.
T Consensus       308 -~~~~~~~~~---~~~~~~~~~~~~~li~~mL~~dP~~Rpta~e~l~hp~f~~  356 (357)
T PHA03209        308 -ERQPYTRYP---CFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEILNYPMFAQ  356 (357)
T ss_pred             -CCCcccccH---HHhccCCCchHHHHHHHHHcCCcccCcCHHHHhcCchhcc
Confidence             000000000   0001123556778999999999999999999999999985

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=99.97  E-value=1.5e-30  Score=213.92  Aligned_cols=170  Identities=18%  Similarity=0.236  Sum_probs=130.9

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceec---CcCcccCcCCCcccchHHhhhc
Q 026540            2 TIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRA---NKQFAEEIQTRQYRAPEVILRA   78 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~---~~~~~~~~~~~~~~~PE~~~~~   78 (237)
                      .+++.++..++.|++.||.|+|..+++||||||+||+++.++.++|+|||++...   ........|+..|+|||++.+.
T Consensus        92 ~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  171 (329)
T cd05588          92 KLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPGDTTSTFCGTPNYIAPEILRGE  171 (329)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEECcCccccccccCCCccccccCCccccCHHHHcCC
Confidence            3678999999999999999999999999999999999999999999999987532   2223345789999999999988


Q ss_pred             CCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCC
Q 026540           79 GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFW  158 (237)
Q Consensus        79 ~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (237)
                      .++.++|+||+|++++++++|..||........ ........+                                     
T Consensus       172 ~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~-~~~~~~~~~-------------------------------------  213 (329)
T cd05588         172 DYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDN-PDQNTEDYL-------------------------------------  213 (329)
T ss_pred             CCCCccceechHHHHHHHHHCCCCccccccccc-ccccchHHH-------------------------------------
Confidence            899999999999999999999999964321100 000000000                                     


Q ss_pred             chhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCC------HHHHhcCCCcCcccC
Q 026540          159 SLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPT------AQQCLQHPWLSLRNS  210 (237)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t------~~ell~hp~f~~~~~  210 (237)
                       ...........+..++..+.+++.+||+.||.+|++      ++++++||||...++
T Consensus       214 -~~~~~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~hp~~~~~~~  270 (329)
T cd05588         214 -FQVILEKQIRIPRSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKSHPFFRNIDW  270 (329)
T ss_pred             -HHHHHcCCCCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhcCCCCCCCCH
Confidence             011111122334456778899999999999999987      789999999986544

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=99.97  E-value=3.3e-30  Score=211.70  Aligned_cols=167  Identities=20%  Similarity=0.214  Sum_probs=130.4

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecC---cCcccCcCCCcccchHHhhhcC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRAN---KQFAEEIQTRQYRAPEVILRAG   79 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~---~~~~~~~~~~~~~~PE~~~~~~   79 (237)
                      +++.++..++.|++.||+|+|+.+++||||||+||+++.++.++|+|||++....   .......|++.|+|||++.+..
T Consensus        93 l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~  172 (327)
T cd05617          93 LPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGDTTSTFCGTPNYIAPEILRGEE  172 (327)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEeCCCCEEEeccccceeccCCCCceecccCCcccCCHHHHCCCC
Confidence            6788999999999999999999999999999999999999999999999886422   2233457899999999999888


Q ss_pred             CCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCc
Q 026540           80 YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWS  159 (237)
Q Consensus        80 ~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (237)
                      ++.++|+||+|++++++++|..||................                                        
T Consensus       173 ~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~----------------------------------------  212 (327)
T cd05617         173 YGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLF----------------------------------------  212 (327)
T ss_pred             CCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHH----------------------------------------
Confidence            9999999999999999999999996442111001100100                                        


Q ss_pred             hhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCC------HHHHhcCCCcCcccC
Q 026540          160 LDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPT------AQQCLQHPWLSLRNS  210 (237)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t------~~ell~hp~f~~~~~  210 (237)
                       ..........+...+..+.+++.+||+.||.+|++      ++++++||||...++
T Consensus       213 -~~~~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h~~f~~~~~  268 (327)
T cd05617         213 -QVILEKPIRIPRFLSVKASHVLKGFLNKDPKERLGCQPQTGFSDIKSHTFFRSIDW  268 (327)
T ss_pred             -HHHHhCCCCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHHcCCCCCCCCH
Confidence             00111112234445678899999999999999998      579999999997653

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]

Probab=99.97  E-value=2.6e-30  Score=197.42  Aligned_cols=166  Identities=23%  Similarity=0.321  Sum_probs=131.9

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcC-CccCCCCCccccCCCCcEEEeecCcceecCc--CcccCcCCCcccchHHhhhc-
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMG-GIELPKPERCLDGIDMRCKVVDFGNACRANK--QFAEEIQTRQYRAPEVILRA-   78 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~-~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~--~~~~~~~~~~~~~PE~~~~~-   78 (237)
                      +.|.-+.++...++.||+|+..+|. +|||+||+|||+|+.|.+|++|||++.++..  -.+...|-+.||+||.+--. 
T Consensus       188 iPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdSkAhtrsAGC~~YMaPERidp~~  267 (391)
T KOG0983|consen  188 IPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKAHTRSAGCAAYMAPERIDPPD  267 (391)
T ss_pred             chHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEccCCCEEeecccccceeecccccccccCCccccCccccCCCC
Confidence            4567788899999999999998776 5999999999999999999999999966543  34456788999999998744 


Q ss_pred             --CCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcccc
Q 026540           79 --GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLK  156 (237)
Q Consensus        79 --~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (237)
                        .|...+|+||+|+.++|+.+|+.||.+..     -+   .+.+..+++..|+.+                        
T Consensus       268 ~~kYDiRaDVWSlGITlveLaTg~yPy~~c~-----td---Fe~ltkvln~ePP~L------------------------  315 (391)
T KOG0983|consen  268 KPKYDIRADVWSLGITLVELATGQYPYKGCK-----TD---FEVLTKVLNEEPPLL------------------------  315 (391)
T ss_pred             CCccchhhhhhhhccchhhhhcccCCCCCCC-----cc---HHHHHHHHhcCCCCC------------------------
Confidence              48889999999999999999999998764     12   233333333222111                        


Q ss_pred             CCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccCCc
Q 026540          157 FWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNSTR  212 (237)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~~~  212 (237)
                                  .-...+++.|.+|+..||+.|+.+||...++|+|||+...+.-.
T Consensus       316 ------------~~~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h~Fi~~ye~a~  359 (391)
T KOG0983|consen  316 ------------PGHMGFSPDFQSFVKDCLTKDHRKRPKYNKLLEHPFIKRYETAE  359 (391)
T ss_pred             ------------CcccCcCHHHHHHHHHHhhcCcccCcchHHHhcCcceeecchhh
Confidence                        11223689999999999999999999999999999998766433

>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.96  E-value=3.3e-30  Score=206.04  Aligned_cols=167  Identities=20%  Similarity=0.282  Sum_probs=131.0

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCC------CcEEEeecCcceecCc--CcccCcCCCcccchH
Q 026540            2 TIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGID------MRCKVVDFGNACRANK--QFAEEIQTRQYRAPE   73 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~------~~~kl~dfg~~~~~~~--~~~~~~~~~~~~~PE   73 (237)
                      +++|+-++.++.|+++||.++|..+|+||||||+|||++.+      ..+||+|||+++....  -....+|++.|||||
T Consensus       105 ~l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L~~~~~a~tlcGSplYMAPE  184 (429)
T KOG0595|consen  105 RLPEATARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFLQPGSMAETLCGSPLYMAPE  184 (429)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCCCCCCceEEecccchhhhCCchhHHHHhhCCccccCHH
Confidence            57899999999999999999999999999999999999764      5689999999987653  345679999999999


Q ss_pred             HhhhcCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhc
Q 026540           74 VILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIR  153 (237)
Q Consensus        74 ~~~~~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (237)
                      ++...+|+.++|+||+|+++|++++|+.||...+      ..+.+..+                      .....     
T Consensus       185 V~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t------~~eL~~~~----------------------~k~~~-----  231 (429)
T KOG0595|consen  185 VIMSQQYDAKADLWSIGTILYQCLTGKPPFDAET------PKELLLYI----------------------KKGNE-----  231 (429)
T ss_pred             HHHhccccchhhHHHHHHHHHHHHhCCCCccccC------HHHHHHHH----------------------hcccc-----
Confidence            9999999999999999999999999999998664      11111100                      00000     


Q ss_pred             cccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccCCcc
Q 026540          154 RLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNSTRD  213 (237)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~~~~  213 (237)
                                  .....+...+....+++...|..+|..|.++.+-+.|++.........
T Consensus       232 ------------~~~~~~~~~s~~~~~Ll~~ll~~~~~~~~~~~~~~~~~~l~~~p~~~~  279 (429)
T KOG0595|consen  232 ------------IVPVLPAELSNPLRELLISLLQRNPKDRISFEDFFDHPFLAANPQDRA  279 (429)
T ss_pred             ------------ccCchhhhccCchhhhhhHHHhcCccccCchHHhhhhhhcccCccccc
Confidence                        001123344566678888899999999999999999988876554333

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=99.96  E-value=3.3e-30  Score=212.19  Aligned_cols=168  Identities=18%  Similarity=0.218  Sum_probs=132.4

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcCcccCcCCCcccchHHhhhcCCCc
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSF   82 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~   82 (237)
                      +++.++..++.|++.||.|+|..+++||||||+||+++.++.+||+|||++...........|++.|+|||.+.+..++.
T Consensus        98 l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  177 (333)
T cd05600          98 LSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLIDASGHIKLTDFGLSKGIVTYANSVVGSPDYMAPEVLRGKGYDF  177 (333)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEEEeCcCCcccccccCCcccCccccChhHhcCCCCCC
Confidence            57889999999999999999999999999999999999999999999999876555445567899999999999888999


Q ss_pred             hhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCchhH
Q 026540           83 SVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDR  162 (237)
Q Consensus        83 ~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (237)
                      ++|+||+||++++|++|..||...+      .......+.........                            +.  
T Consensus       178 ~~DvwslG~il~ell~g~~pf~~~~------~~~~~~~i~~~~~~~~~----------------------------~~--  221 (333)
T cd05600         178 TVDYWSLGCMLYEFLCGFPPFSGST------PNETWENLKYWKETLQR----------------------------PV--  221 (333)
T ss_pred             ccceecchHHHhhhhhCCCCCCCCC------HHHHHHHHHhccccccC----------------------------CC--
Confidence            9999999999999999999997653      22222222111000000                            00  


Q ss_pred             HhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccC
Q 026540          163 LLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNS  210 (237)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~  210 (237)
                          ........+.++.+|+.+||..+|.+|++++++++||||.....
T Consensus       222 ----~~~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h~~~~~~~~  265 (333)
T cd05600         222 ----YDDPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNHPFFKEVDW  265 (333)
T ss_pred             ----CCccccccCHHHHHHHHHHhhChhhhcCCHHHHHhCcccCCCCH
Confidence                00000134678899999999999999999999999999997644

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=99.96  E-value=7.7e-30  Score=205.26  Aligned_cols=184  Identities=27%  Similarity=0.336  Sum_probs=135.8

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC---cccCcCCCcccchHHhhhc-
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ---FAEEIQTRQYRAPEVILRA-   78 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~~~~PE~~~~~-   78 (237)
                      +++.++..++.|++.||.|+|..+++|+||||+||+++.++.++|+|||++......   .....++..|+|||.+.+. 
T Consensus        98 ~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  177 (285)
T cd07861          98 MDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPVRVYTHEVVTLWYRAPEVLLGSP  177 (285)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEcCCCcEEECcccceeecCCCcccccCCcccccccChHHhcCCC
Confidence            678899999999999999999999999999999999999999999999988654322   2234567889999998765 


Q ss_pred             CCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCC
Q 026540           79 GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFW  158 (237)
Q Consensus        79 ~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (237)
                      .++.++|+||+|++++++++|..||.+..      .......+.+..+.+....+........+.........      .
T Consensus       178 ~~~~~~Dv~slG~il~~l~tg~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~  245 (285)
T cd07861         178 RYSTPVDIWSIGTIFAEMATKKPLFHGDS------EIDQLFRIFRILGTPTEDVWPGVTSLPDYKNTFPKWKK------G  245 (285)
T ss_pred             CcCcHHHHHHHHHHHHHHHHCCCCCCCCC------HHHHHHHHHHHhCCCChhhhhcchhhHHHHhhccccCc------c
Confidence            47889999999999999999999997653      44455555555555544443322222221111100000      0


Q ss_pred             chhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCc
Q 026540          159 SLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL  205 (237)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f  205 (237)
                      ....       .....+.++.++|.+||+.||.+|||+.+++.||||
T Consensus       246 ~~~~-------~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~~~~  285 (285)
T cd07861         246 SLRS-------AVKNLDEDGLDLLEKMLIYDPAKRISAKKALNHPYF  285 (285)
T ss_pred             hhHH-------hcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcCCCC
Confidence            0000       112356788899999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=99.96  E-value=1.4e-30  Score=212.99  Aligned_cols=160  Identities=22%  Similarity=0.284  Sum_probs=128.6

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecC---cCcccCcCCCcccchHHhhhcC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRAN---KQFAEEIQTRQYRAPEVILRAG   79 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~---~~~~~~~~~~~~~~PE~~~~~~   79 (237)
                      +++.++..++.|++.||.|+|..+++||||||+||+++.++.+||+|||++....   .......|++.|+|||.+.+..
T Consensus        93 ~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~  172 (316)
T cd05592          93 FDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEGKASTFCGTPDYIAPEILKGQK  172 (316)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCCCccccccCCccccCHHHHcCCC
Confidence            5788899999999999999999999999999999999999999999999986432   2233457899999999998888


Q ss_pred             CCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCc
Q 026540           80 YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWS  159 (237)
Q Consensus        80 ~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (237)
                      ++.++|+||+||+++++++|..||.+.+      .......+..                                    
T Consensus       173 ~~~~~DvwslG~il~ell~G~~Pf~~~~------~~~~~~~i~~------------------------------------  210 (316)
T cd05592         173 YNESVDWWSFGVLLYEMLIGQSPFHGED------EDELFDSILN------------------------------------  210 (316)
T ss_pred             CCCcccchhHHHHHHHHHhCCCCCCCCC------HHHHHHHHHc------------------------------------
Confidence            9999999999999999999999997652      2111111100                                    


Q ss_pred             hhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCH-HHHhcCCCcCcccC
Q 026540          160 LDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTA-QQCLQHPWLSLRNS  210 (237)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~-~ell~hp~f~~~~~  210 (237)
                            .....+..++..+.+|+.+||+.||.+|+++ .++++||||...++
T Consensus       211 ------~~~~~~~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~~h~~~~~~~~  256 (316)
T cd05592         211 ------DRPHFPRWISKEAKDCLSKLFERDPTKRLGVDGDIRQHPFFRGIDW  256 (316)
T ss_pred             ------CCCCCCCCCCHHHHHHHHHHccCCHHHcCCChHHHHcCcccCCCCH
Confidence                  0111233346778899999999999999986 58889999997654

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=99.96  E-value=1.5e-30  Score=215.52  Aligned_cols=165  Identities=20%  Similarity=0.247  Sum_probs=129.4

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC----------------------
Q 026540            2 TIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ----------------------   59 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~----------------------   59 (237)
                      .+++..+..++.|++.||.|+|..+++||||||+||+++.++.++|+|||++......                      
T Consensus        97 ~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  176 (350)
T cd05573          97 VFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDREYYLNDSHNLLFRDNVLVR  176 (350)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEeecCCCCccCcccCccccccccccccccccccccc
Confidence            3678899999999999999999999999999999999999999999999988644322                      


Q ss_pred             ----------cccCcCCCcccchHHhhhcCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCC
Q 026540           60 ----------FAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMP  129 (237)
Q Consensus        60 ----------~~~~~~~~~~~~PE~~~~~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (237)
                                .....|++.|+|||++.+..++.++|+||+||+++++++|+.||....      .......+....... 
T Consensus       177 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~------~~~~~~~i~~~~~~~-  249 (350)
T cd05573         177 RRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDT------LQETYNKIINWKESL-  249 (350)
T ss_pred             ccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCC------HHHHHHHHhccCCcc-
Confidence                      223467899999999998889999999999999999999999997653      111111111100000 


Q ss_pred             HHHHhcCCCchhhhcccCccchhccccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCC-HHHHhcCCCcCcc
Q 026540          130 RKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPT-AQQCLQHPWLSLR  208 (237)
Q Consensus       130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t-~~ell~hp~f~~~  208 (237)
                                                           ........++.+.+||.+||. ||.+|++ ++++++||||...
T Consensus       250 -------------------------------------~~p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~hp~~~~~  291 (350)
T cd05573         250 -------------------------------------RFPPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSHPFFKGI  291 (350)
T ss_pred             -------------------------------------cCCCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcCCCcCCC
Confidence                                                 000011146788999999998 9999999 9999999999976


Q ss_pred             cCC
Q 026540          209 NST  211 (237)
Q Consensus       209 ~~~  211 (237)
                      .+.
T Consensus       292 ~~~  294 (350)
T cd05573         292 DWE  294 (350)
T ss_pred             CHH
Confidence            553

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=99.96  E-value=1.5e-30  Score=212.90  Aligned_cols=160  Identities=21%  Similarity=0.264  Sum_probs=129.5

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecC---cCcccCcCCCcccchHHhhhcC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRAN---KQFAEEIQTRQYRAPEVILRAG   79 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~---~~~~~~~~~~~~~~PE~~~~~~   79 (237)
                      +++.++..++.|++.||.|+|..+++||||||+||+++.++.++|+|||++....   .......++..|+|||++.+..
T Consensus        93 l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~  172 (318)
T cd05570          93 FDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGVTTSTFCGTPDYIAPEILSYQP  172 (318)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEECCCCcEEecccCCCeecCcCCCcccceecCccccCHHHhcCCC
Confidence            6788999999999999999999999999999999999999999999999875421   2223346789999999999888


Q ss_pred             CCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCc
Q 026540           80 YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWS  159 (237)
Q Consensus        80 ~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (237)
                      ++.++|+||+||+++++++|..||.+..      .......+.                                     
T Consensus       173 ~~~~~DiwslGvil~~l~~G~~pf~~~~------~~~~~~~i~-------------------------------------  209 (318)
T cd05570         173 YGPAVDWWALGVLLYEMLAGQSPFEGDD------EDELFQSIL-------------------------------------  209 (318)
T ss_pred             CCcchhhhhHHHHHHHHhhCCCCCCCCC------HHHHHHHHH-------------------------------------
Confidence            9999999999999999999999997542      111111110                                     


Q ss_pred             hhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCH-----HHHhcCCCcCcccC
Q 026540          160 LDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTA-----QQCLQHPWLSLRNS  210 (237)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~-----~ell~hp~f~~~~~  210 (237)
                           ......+...+..+.+||.+||+.||.+|||+     .++++||||+..++
T Consensus       210 -----~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~~~~~~~~~  260 (318)
T cd05570         210 -----EDEVRYPRWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKGHPFFREIDW  260 (318)
T ss_pred             -----cCCCCCCCcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhcCCCcCCCCH
Confidence                 00111233456788999999999999999999     99999999987654

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=99.96  E-value=7.6e-30  Score=207.15  Aligned_cols=189  Identities=23%  Similarity=0.343  Sum_probs=140.0

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCc---CcccCcCCCcccchHHhhhc-
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK---QFAEEIQTRQYRAPEVILRA-   78 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~---~~~~~~~~~~~~~PE~~~~~-   78 (237)
                      +++..+..++.|++.||.|+|..+++|+||||+||+++.++.++|+|||++.....   ......++..|++||.+.+. 
T Consensus       101 ~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~  180 (301)
T cd07873         101 INMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYSNEVVTLWYRPPDILLGST  180 (301)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHHHEEECCCCcEEECcCcchhccCCCCCcccccceeecccCcHHHhCCC
Confidence            56788999999999999999999999999999999999999999999998854332   22234567899999998765 


Q ss_pred             CCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCC
Q 026540           79 GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFW  158 (237)
Q Consensus        79 ~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (237)
                      .++.++|+||+|+++++|++|+.||...+      .......+.+.++.+....+........+.. ...       ...
T Consensus       181 ~~~~~~Dv~slG~~l~el~tg~~~f~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-------~~~  246 (301)
T cd07873         181 DYSTQIDMWGVGCIFYEMSTGRPLFPGST------VEEQLHFIFRILGTPTEETWPGILSNEEFKS-YNY-------PKY  246 (301)
T ss_pred             CCccHHHHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHHHcCCCChhhchhhhccccccc-ccc-------Ccc
Confidence            47889999999999999999999997653      4566667777777666555432222111100 000       000


Q ss_pred             chhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCccc
Q 026540          159 SLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRN  209 (237)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~  209 (237)
                      ....    ........+..+.+||.+||+.||.+|||++|+++||||....
T Consensus       247 ~~~~----~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h~~f~~~~  293 (301)
T cd07873         247 RADC----LHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKHPYFHCLG  293 (301)
T ss_pred             cccc----HHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcCccccccc
Confidence            0000    0011223466788999999999999999999999999998665

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>PHA03211 serine/threonine kinase US3; Provisional

Probab=99.96  E-value=9.4e-30  Score=216.59  Aligned_cols=196  Identities=19%  Similarity=0.168  Sum_probs=131.2

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC-----cccCcCCCcccchHHhhh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ-----FAEEIQTRQYRAPEVILR   77 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~-----~~~~~~~~~~~~PE~~~~   77 (237)
                      +++.++..++.|++.||.|+|..+++||||||+|||++.++.++|+|||++......     .....|+..|++||++.+
T Consensus       257 l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~GT~~Y~APE~~~~  336 (461)
T PHA03211        257 LGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLVNGPEDICLGDFGAACFARGSWSTPFHYGIAGTVDTNAPEVLAG  336 (461)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCEEECcCCHHHEEECCCCCEEEcccCCceecccccccccccccCCCcCCcCHHHHcC
Confidence            678899999999999999999999999999999999999999999999998654321     123468999999999998


Q ss_pred             cCCCchhhhhhhhhHHHHHhcCCcccCCCC-CCCCCChHHHHHHHHHHHCCCCHHHHhcC-CCc-hhhhcccCccchhcc
Q 026540           78 AGYSFSVDMWSFACTAFELATGDMLFAPKS-GQGFCEDEDHLALMMELIGKMPRKIAIGG-AQS-KDYFDRHGDLKRIRR  154 (237)
Q Consensus        78 ~~~~~~~diws~g~~l~~~~~g~~~f~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~  154 (237)
                      ..++.++|+||+||++|++++|..++.... .........++..+.+..+.....+.... .+. ..+...... .....
T Consensus       337 ~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~  415 (461)
T PHA03211        337 DPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQHAGSRLVSQYRHRAAR-NRRPA  415 (461)
T ss_pred             CCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCCCcchHHHHHHHhhhhc-ccCCc
Confidence            889999999999999999998876554332 11112233444444443332111110000 000 000000000 00000


Q ss_pred             ccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCc
Q 026540          155 LKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSL  207 (237)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~  207 (237)
                      .....+.+        ....+..+.+||.+||++||.+|||+.|+|+||||..
T Consensus       416 ~~~~~~~~--------~~~~~~~~~dli~~mL~~DP~~RPsa~elL~hp~f~~  460 (461)
T PHA03211        416 YTRPAWTR--------YYKLDLDVEYLVCRALTFDGARRPSAAELLRLPLFQS  460 (461)
T ss_pred             cCCcchhh--------hccccchHHHHHHHHcccChhhCcCHHHHhhCcccCC
Confidence            00000000        0123457889999999999999999999999999974

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=99.96  E-value=1.3e-30  Score=213.78  Aligned_cols=160  Identities=21%  Similarity=0.201  Sum_probs=128.5

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecC---cCcccCcCCCcccchHHhhhcC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRAN---KQFAEEIQTRQYRAPEVILRAG   79 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~---~~~~~~~~~~~~~~PE~~~~~~   79 (237)
                      +.+.++..++.|++.||.|+|..+++||||||+|||++.++.+||+|||++....   .......|++.|+|||.+.+..
T Consensus        93 ~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~  172 (323)
T cd05575          93 FPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSKTTSTFCGTPEYLAPEVLRKQP  172 (323)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeccCCCcccccCCCccccccCChhhcChhhhcCCC
Confidence            5688899999999999999999999999999999999999999999999875422   2223446789999999998888


Q ss_pred             CCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCc
Q 026540           80 YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWS  159 (237)
Q Consensus        80 ~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (237)
                      ++.++|+||+|++++++++|..||....      .......+.                                     
T Consensus       173 ~~~~~DvwslG~il~ell~g~~pf~~~~------~~~~~~~i~-------------------------------------  209 (323)
T cd05575         173 YDRTVDWWCLGAVLYEMLYGLPPFYSRD------TAEMYDNIL-------------------------------------  209 (323)
T ss_pred             CCccccccccchhhhhhhcCCCCCCCCC------HHHHHHHHH-------------------------------------
Confidence            9999999999999999999999997542      111111110                                     


Q ss_pred             hhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCH----HHHhcCCCcCcccC
Q 026540          160 LDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTA----QQCLQHPWLSLRNS  210 (237)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~----~ell~hp~f~~~~~  210 (237)
                           ......+...+..+.++|.+||+.||.+|+++    .++++||||....+
T Consensus       210 -----~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~il~~~~~~~~~~  259 (323)
T cd05575         210 -----NKPLRLKPNISVSARHLLEGLLQKDRTKRLGAKDDFLEIKNHVFFSSINW  259 (323)
T ss_pred             -----cCCCCCCCCCCHHHHHHHHHHhhcCHHhCCCCCCCHHHHHcCCCcCCCCH
Confidence                 01111223346788999999999999999987    69999999987544

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=99.96  E-value=2.6e-30  Score=211.38  Aligned_cols=161  Identities=23%  Similarity=0.290  Sum_probs=128.8

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecC---cCcccCcCCCcccchHHhhhcC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRAN---KQFAEEIQTRQYRAPEVILRAG   79 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~---~~~~~~~~~~~~~~PE~~~~~~   79 (237)
                      +++.++..++.|++.||+|+|..+++||||||+||+++.++.++|+|||++....   .......|+..|+|||++.+..
T Consensus        93 ~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~  172 (316)
T cd05619          93 FDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDAKTCTFCGTPDYIAPEILLGQK  172 (316)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEccCCcceECCCCCCceeeecCCccccCHHHHcCCC
Confidence            5678889999999999999999999999999999999999999999999886422   2223456789999999998888


Q ss_pred             CCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCc
Q 026540           80 YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWS  159 (237)
Q Consensus        80 ~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (237)
                      ++.++|+||+||+++++++|..||.+..      .......+. .                                   
T Consensus       173 ~~~~~DvwslG~il~el~~G~~pf~~~~------~~~~~~~i~-~-----------------------------------  210 (316)
T cd05619         173 YNTSVDWWSFGVLLYEMLIGQSPFHGHD------EEELFQSIR-M-----------------------------------  210 (316)
T ss_pred             CCchhhhhhHHHHHHHHHhCCCCCCCCC------HHHHHHHHH-h-----------------------------------
Confidence            9999999999999999999999997542      211111110 0                                   


Q ss_pred             hhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHH-HHhcCCCcCcccCC
Q 026540          160 LDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQ-QCLQHPWLSLRNST  211 (237)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~-ell~hp~f~~~~~~  211 (237)
                            .....+...+.++.+|+.+||+.||.+|+++. ++++||||...++.
T Consensus       211 ------~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~h~~~~~~~~~  257 (316)
T cd05619         211 ------DNPCYPRWLTREAKDILVKLFVREPERRLGVKGDIRQHPFFREIDWS  257 (316)
T ss_pred             ------CCCCCCccCCHHHHHHHHHHhccCHhhcCCChHHHHcCcccCCCCHH
Confidence                  00111223456788999999999999999996 99999999987543

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.96  E-value=3.9e-30  Score=192.65  Aligned_cols=158  Identities=22%  Similarity=0.290  Sum_probs=136.3

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceec-CcCcccCcCCCcccchHHhhhcCCC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRA-NKQFAEEIQTRQYRAPEVILRAGYS   81 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~-~~~~~~~~~~~~~~~PE~~~~~~~~   81 (237)
                      ++|.++..|++|++.|+.|+|..+++||||||+|+|++..+.+|++|||.+... .......+||.-|++||+..+..++
T Consensus       121 f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p~~kR~tlcgt~dyl~pEmv~~~~hd  200 (281)
T KOG0580|consen  121 FDEQRAATYIKQLANALLYCHLKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSNKRKTLCGTLDYLPPEMVEGRGHD  200 (281)
T ss_pred             ccccchhHHHHHHHHHHHHhccCCcccCCCCHHHhccCCCCCeeccCCCceeecCCCCceeeecccccCCHhhcCCCCcc
Confidence            789999999999999999999999999999999999999999999999988554 3445567899999999999999999


Q ss_pred             chhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCchh
Q 026540           82 FSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLD  161 (237)
Q Consensus        82 ~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (237)
                      ..+|+|++|+++++++.|..||...+      ..+...+                                         
T Consensus       201 ~~Vd~w~lgvl~yeflvg~ppFes~~------~~etYkr-----------------------------------------  233 (281)
T KOG0580|consen  201 KFVDLWSLGVLCYEFLVGLPPFESQS------HSETYKR-----------------------------------------  233 (281)
T ss_pred             chhhHHHHHHHHHHHHhcCCchhhhh------hHHHHHH-----------------------------------------
Confidence            99999999999999999999997653      2222222                                         


Q ss_pred             HHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcc
Q 026540          162 RLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLR  208 (237)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~  208 (237)
                       +......++..++.++.|+|.+||..+|.+|.+..|++.|||+...
T Consensus       234 -I~k~~~~~p~~is~~a~dlI~~ll~~~p~~r~~l~~v~~hpwI~a~  279 (281)
T KOG0580|consen  234 -IRKVDLKFPSTISGGAADLISRLLVKNPIERLALTEVMDHPWIVAN  279 (281)
T ss_pred             -HHHccccCCcccChhHHHHHHHHhccCccccccHHHHhhhHHHHhc
Confidence             2223445567778999999999999999999999999999998743

>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]

Probab=99.96  E-value=8.5e-30  Score=190.14  Aligned_cols=196  Identities=17%  Similarity=0.271  Sum_probs=146.8

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCC-CCcEEEeecCcceecC--cCcccCcCCCcccchHHhhhc
Q 026540            2 TIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGI-DMRCKVVDFGNACRAN--KQFAEEIQTRQYRAPEVILRA   78 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~-~~~~kl~dfg~~~~~~--~~~~~~~~~~~~~~PE~~~~~   78 (237)
                      +|+-..++.++.+++.||.|+|++||.|||+||.|++|+. ...++++|+|++..+.  ..++.++.+++|..||.+...
T Consensus       128 tl~d~dIryY~~elLkALdyCHS~GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp~~eYnVRVASRyfKGPELLVdy  207 (338)
T KOG0668|consen  128 TLTDYDIRYYIYELLKALDYCHSMGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDY  207 (338)
T ss_pred             hhchhhHHHHHHHHHHHHhHHHhcCcccccCCcceeeechhhceeeeeecchHhhcCCCceeeeeeehhhcCCchheeec
Confidence            4667789999999999999999999999999999999987 4789999999996654  456667889999999999987


Q ss_pred             C-CCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHH---hcCCCchhhhcccCccchhcc
Q 026540           79 G-YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIA---IGGAQSKDYFDRHGDLKRIRR  154 (237)
Q Consensus        79 ~-~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~  154 (237)
                      + |..+-|+||+||+++.|+..+.||+...     ++.+|+..+.+++|+-.-.-.   ....-...+.+..+      .
T Consensus       208 ~~YDYSLD~WS~GcmlA~miFrkepFFhG~-----dN~DQLVkIakVLGt~el~~Yl~KY~i~Ldp~~~~i~~------~  276 (338)
T KOG0668|consen  208 QMYDYSLDMWSLGCMLASMIFRKEPFFHGH-----DNYDQLVKIAKVLGTDELYAYLNKYQIDLDPQFEDILG------R  276 (338)
T ss_pred             hhccccHHHHHHHHHHHHHHhccCcccCCC-----CCHHHHHHHHHHhChHHHHHHHHHHccCCChhHhhHhh------c
Confidence            5 7999999999999999999998887654     789999999999987221100   00001111111111      1


Q ss_pred             ccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccC
Q 026540          155 LKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNS  210 (237)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~  210 (237)
                      .++.++.+.+...  ...-.+++++||+.++|.+|-.+|+||+|++.||||.....
T Consensus       277 ~~rk~w~~Fi~~~--n~hl~~peaiDlldklLrYDHqeRlTakEam~HpyF~~~~~  330 (338)
T KOG0668|consen  277 HSRKPWSRFINSE--NQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAHPYFAPVRE  330 (338)
T ss_pred             cccccHHHhCCcc--ccccCChHHHHHHHHHHhhccccccchHHHhcCchHHHHHH
Confidence            1111222222111  11123578999999999999999999999999999986643

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=99.96  E-value=7.3e-30  Score=212.52  Aligned_cols=164  Identities=18%  Similarity=0.220  Sum_probs=125.3

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC-----------------------
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ-----------------------   59 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~-----------------------   59 (237)
                      +++.+++.++.|++.||.|+|+.+++||||||+|||++.++.++|+|||++......                       
T Consensus        98 l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  177 (363)
T cd05628          98 LTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTEFYRNLNHSLPSDFTFQNMN  177 (363)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCCEEEeeccCcccccccccccccccccccccccccccccc
Confidence            678999999999999999999999999999999999999999999999987532210                       


Q ss_pred             ---------------cccCcCCCcccchHHhhhcCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHH
Q 026540           60 ---------------FAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMEL  124 (237)
Q Consensus        60 ---------------~~~~~~~~~~~~PE~~~~~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~  124 (237)
                                     ....+||+.|+|||++.+..++.++|+||+||++++|++|..||.+.+      .......+...
T Consensus       178 ~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~Pf~~~~------~~~~~~~i~~~  251 (363)
T cd05628         178 SKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSET------PQETYKKVMNW  251 (363)
T ss_pred             cccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCCCCCCC------HHHHHHHHHcC
Confidence                           123478999999999998889999999999999999999999997653      22222222110


Q ss_pred             HCCCCHHHHhcCCCchhhhcccCccchhccccCCchhHHhhhhcCCC--HHhHHHHHHHHHhccccCCC---CCCCHHHH
Q 026540          125 IGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFS--ETDAREFAEFLVPLLDFTPE---KRPTAQQC  199 (237)
Q Consensus       125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~li~~~L~~dP~---~R~t~~el  199 (237)
                      ...                                        ..++  ...+.++.+||.+|+. +|.   .||+++|+
T Consensus       252 ~~~----------------------------------------~~~p~~~~~s~~~~~li~~l~~-~~~~r~~r~~~~ei  290 (363)
T cd05628         252 KET----------------------------------------LIFPPEVPISEKAKDLILRFCC-EWEHRIGAPGVEEI  290 (363)
T ss_pred             cCc----------------------------------------ccCCCcCCCCHHHHHHHHHHcC-ChhhcCCCCCHHHH
Confidence            000                                        0001  1235678889988765 344   56899999


Q ss_pred             hcCCCcCcccCCcc
Q 026540          200 LQHPWLSLRNSTRD  213 (237)
Q Consensus       200 l~hp~f~~~~~~~~  213 (237)
                      ++||||.+.++...
T Consensus       291 ~~hp~f~~~~~~~~  304 (363)
T cd05628         291 KTNPFFEGVDWEHI  304 (363)
T ss_pred             hCCCCCCCCCHHHH
Confidence            99999998765443

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=99.96  E-value=1.7e-29  Score=207.77  Aligned_cols=198  Identities=19%  Similarity=0.244  Sum_probs=131.5

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhc-CCccCCCCCccccCCCCcEEEeecCcceecCc-CcccCcCCCcccchHHhhhcCC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASM-GGIELPKPERCLDGIDMRCKVVDFGNACRANK-QFAEEIQTRQYRAPEVILRAGY   80 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~-~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~-~~~~~~~~~~~~~PE~~~~~~~   80 (237)
                      +++..+..++.|++.||.|+|+.+ ++|+||||+||+++.++.++|+|||++..... ......++..|+|||.+.+..+
T Consensus       100 ~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~  179 (331)
T cd06649         100 IPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHY  179 (331)
T ss_pred             CCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcCCCcEEEccCcccccccccccccCCCCcCcCCHhHhcCCCC
Confidence            567889999999999999999865 88999999999999999999999998864432 2334568899999999988889


Q ss_pred             CchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHH----Hh-cCCCchhh---hcccCccchh
Q 026540           81 SFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKI----AI-GGAQSKDY---FDRHGDLKRI  152 (237)
Q Consensus        81 ~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-~~~~~~~~---~~~~~~~~~~  152 (237)
                      +.++|+||+|++++++++|+.||....      . ..   +...++......    .. ........   ....+. ...
T Consensus       180 ~~~~DiwslG~il~el~tg~~p~~~~~------~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~  248 (331)
T cd06649         180 SVQSDIWSMGLSLVELAIGRYPIPPPD------A-KE---LEAIFGRPVVDGEEGEPHSISPRPRPPGRPVSGHGM-DSR  248 (331)
T ss_pred             CchHhHHHHHHHHHHHHhCCCCCCCCC------H-HH---HHHHhcccccccccCCccccCccccccccccccccc-ccc
Confidence            999999999999999999999997542      1 11   122222111000    00 00000000   000000 000


Q ss_pred             ccccCCchhHHhhhh---cCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccCC
Q 026540          153 RRLKFWSLDRLLVDK---YRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNST  211 (237)
Q Consensus       153 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~~  211 (237)
                      ...............   .......+.++.+||.+||++||++|||++++++||||+.....
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~~~~~~~~~  310 (331)
T cd06649         249 PAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNHTFIKRSEVE  310 (331)
T ss_pred             cchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcChHHhhcccc
Confidence            000000000000000   00112356789999999999999999999999999999966544

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]

Probab=99.96  E-value=6.2e-30  Score=204.79  Aligned_cols=165  Identities=22%  Similarity=0.224  Sum_probs=133.7

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecC-------------------------
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRAN-------------------------   57 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~-------------------------   57 (237)
                      ++|+.|+-|+++++-||.|||.+||++|||||+||||..+|++-|+||.++....                         
T Consensus       176 fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPENILvredGHIMLsDFDLS~~~~~~Pt~~~s~~~~~~~~~~~~~~~~~  255 (459)
T KOG0610|consen  176 FSESAARFYAAEVLLALEYLHMLGIVYRDLKPENILVREDGHIMLSDFDLSLRCPVSPTLVKSSSPRSSGSQPSCRSRQP  255 (459)
T ss_pred             cchhhHHHHHHHHHHHHHHHHhhceeeccCCcceeEEecCCcEEeeeccccccCCCCCeeeccCCCCCCCCCcccccccc
Confidence            6789999999999999999999999999999999999999999999999872110                         


Q ss_pred             -----------cC-----------------------cccCcCCCcccchHHhhhcCCCchhhhhhhhhHHHHHhcCCccc
Q 026540           58 -----------KQ-----------------------FAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLF  103 (237)
Q Consensus        58 -----------~~-----------------------~~~~~~~~~~~~PE~~~~~~~~~~~diws~g~~l~~~~~g~~~f  103 (237)
                                 +.                       ....+||-.|+|||++.+.+.+.++|.|+||+++|||+.|..||
T Consensus       256 s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GHgsAVDWWtfGIflYEmLyG~TPF  335 (459)
T KOG0610|consen  256 SCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGHGSAVDWWTFGIFLYEMLYGTTPF  335 (459)
T ss_pred             cccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCCCchhhHHHHHHHHHHHHhCCCCc
Confidence                       00                       01127788999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCchhHHhhhhcCCCHHhHHHHHHHHH
Q 026540          104 APKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLV  183 (237)
Q Consensus       104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  183 (237)
                      .+.+      ....+.+++..--.                                        .......+..+.|||+
T Consensus       336 KG~~------~~~Tl~NIv~~~l~----------------------------------------Fp~~~~vs~~akDLIr  369 (459)
T KOG0610|consen  336 KGSN------NKETLRNIVGQPLK----------------------------------------FPEEPEVSSAAKDLIR  369 (459)
T ss_pred             CCCC------chhhHHHHhcCCCc----------------------------------------CCCCCcchhHHHHHHH
Confidence            9875      33333333211000                                        0111245788999999


Q ss_pred             hccccCCCCCCC----HHHHhcCCCcCcccCCcc
Q 026540          184 PLLDFTPEKRPT----AQQCLQHPWLSLRNSTRD  213 (237)
Q Consensus       184 ~~L~~dP~~R~t----~~ell~hp~f~~~~~~~~  213 (237)
                      ++|..||.+|+.    |.||.+||||.+.+|...
T Consensus       370 ~LLvKdP~kRlg~~rGA~eIK~HpFF~gVnWaLi  403 (459)
T KOG0610|consen  370 KLLVKDPSKRLGSKRGAAEIKRHPFFEGVNWALI  403 (459)
T ss_pred             HHhccChhhhhccccchHHhhcCccccCCChhhe
Confidence            999999999998    999999999999987543

>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.96  E-value=6.5e-30  Score=214.41  Aligned_cols=165  Identities=21%  Similarity=0.324  Sum_probs=132.7

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecC---cCcccCcCCCcccchHHhhh-
Q 026540            2 TIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRAN---KQFAEEIQTRQYRAPEVILR-   77 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~---~~~~~~~~~~~~~~PE~~~~-   77 (237)
                      +|.|.++.-+++|+++||.|+|+..|+|||||..|||+..+|.++|+|||.+....   .....++||++|||||+.++ 
T Consensus       126 ~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~t~qkRDsFIGTPYWMAPEVvmCE  205 (1187)
T KOG0579|consen  126 VLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILLTLDGDIRLADFGVSAKNKSTRQKRDSFIGTPYWMAPEVVMCE  205 (1187)
T ss_pred             ccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEEEecCcEeeecccccccchhHHhhhccccCCcccccchheeec
Confidence            47899999999999999999999999999999999999999999999999885543   33457799999999999874 


Q ss_pred             ----cCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhc
Q 026540           78 ----AGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIR  153 (237)
Q Consensus        78 ----~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (237)
                          .+|+.++||||||+.+.+|..+.+|-...+         .+..+..+-..-|+.+                     
T Consensus       206 T~KD~PYDykaDiWSlGITLIEMAqiEPPHheln---------pMRVllKiaKSePPTL---------------------  255 (1187)
T KOG0579|consen  206 TFKDQPYDYKADIWSLGITLIEMAQIEPPHHELN---------PMRVLLKIAKSEPPTL---------------------  255 (1187)
T ss_pred             cccCCCchhhhhHHhhhhHHHHHhccCCCccccc---------hHHHHHHHhhcCCCcc---------------------
Confidence                478999999999999999999988765432         2222233222222111                     


Q ss_pred             cccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccCC
Q 026540          154 RLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNST  211 (237)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~~  211 (237)
                                     -.|..-+..|.||+.+||..||..||++.|+|+||||......
T Consensus       256 ---------------lqPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~Hpfv~~~~Sn  298 (1187)
T KOG0579|consen  256 ---------------LQPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLKHPFVQNAPSN  298 (1187)
T ss_pred             ---------------cCcchhhhHHHHHHHHHHhcCCccCCCHHHHhhCcccccCCcc
Confidence                           1122235678999999999999999999999999999966543

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=99.96  E-value=3.7e-29  Score=206.77  Aligned_cols=196  Identities=24%  Similarity=0.350  Sum_probs=146.2

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcCcccCcCCCcccchHHhhhc-CC
Q 026540            2 TIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRA-GY   80 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~PE~~~~~-~~   80 (237)
                      .+++.++..++.|++.+|.|+|..++.|+||||+||+++.++.++|+|||++...........++..|++||.+.+. .+
T Consensus       114 ~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  193 (343)
T cd07851         114 KLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHY  193 (343)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEccccccccccccccCCcccccccCHHHHhCCCCC
Confidence            36788999999999999999999999999999999999999999999999987655544555678889999998764 57


Q ss_pred             CchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCch-hhhcccCccchhccccCCc
Q 026540           81 SFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSK-DYFDRHGDLKRIRRLKFWS  159 (237)
Q Consensus        81 ~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~  159 (237)
                      +.++|+||+|++++++++|..||....      ....+..+....+.+++.+........ ..+.        .......
T Consensus       194 ~~~~DvwslGv~l~elltg~~pf~~~~------~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~  259 (343)
T cd07851         194 NQTVDIWSVGCIMAELLTGKTLFPGSD------HIDQLKRIMNLVGTPDEELLQKISSESARNYI--------QSLPQMP  259 (343)
T ss_pred             CchHhHHHHHHHHHHHHhCCCCCCCCC------hHHHHHHHHHhcCCCCHHHHhhccchhHHHHH--------HhccccC
Confidence            889999999999999999999997653      455666666767766665543222110 0000        0000000


Q ss_pred             hhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccCCcccc
Q 026540          160 LDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNSTRDET  215 (237)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~~~~~~  215 (237)
                      .....    ......+..+.+|+.+||+.+|.+|||+.++++||||..+..+..++
T Consensus       260 ~~~~~----~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h~~~~~~~~~~~~~  311 (343)
T cd07851         260 KKDFK----EVFSGANPLAIDLLEKMLVLDPDKRITAAEALAHPYLAEYHDPEDEP  311 (343)
T ss_pred             CCCHH----HHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcCCCccccCCCcccc
Confidence            00000    00112367899999999999999999999999999999886654433

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.96  E-value=4e-31  Score=212.89  Aligned_cols=158  Identities=25%  Similarity=0.329  Sum_probs=130.0

Q ss_pred             hHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCc---CcccCcCCCcccchHHhhhcCC
Q 026540            4 VEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK---QFAEEIQTRQYRAPEVILRAGY   80 (237)
Q Consensus         4 ~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~---~~~~~~~~~~~~~PE~~~~~~~   80 (237)
                      +|.++.-+++.++.|+.|+|..+.+|||||+.|||+..+|.+|++|||.+.....   .....+||++|||||++.+..|
T Consensus       109 ~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~rr~tfvGTPfwMAPEVI~~~~Y  188 (467)
T KOG0201|consen  109 DEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILLSESGDVKLADFGVAGQLTNTVKRRKTFVGTPFWMAPEVIKQSGY  188 (467)
T ss_pred             ccceeeeehHHHHHHhhhhhhcceecccccccceeEeccCcEEEEecceeeeeechhhccccccccccccchhhhccccc
Confidence            6778888999999999999999999999999999999999999999999865442   2357899999999999998899


Q ss_pred             CchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCch
Q 026540           81 SFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSL  160 (237)
Q Consensus        81 ~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (237)
                      +.++||||||++.++|++|.+|+....+             ++++-.+|                               
T Consensus       189 ~~KADIWSLGITaiEla~GePP~s~~hP-------------mrvlflIp-------------------------------  224 (467)
T KOG0201|consen  189 DTKADIWSLGITAIELAKGEPPHSKLHP-------------MRVLFLIP-------------------------------  224 (467)
T ss_pred             cchhhhhhhhHHHHHHhcCCCCCcccCc-------------ceEEEecc-------------------------------
Confidence            9999999999999999999999976531             00000000                               


Q ss_pred             hHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcc
Q 026540          161 DRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLR  208 (237)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~  208 (237)
                       +  .....+...+++.+.+|+..||+.||+.||+|+++|+|+|++.-
T Consensus       225 -k--~~PP~L~~~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh~FIk~a  269 (467)
T KOG0201|consen  225 -K--SAPPRLDGDFSPPFKEFVEACLDKNPEFRPSAKELLKHKFIKRA  269 (467)
T ss_pred             -C--CCCCccccccCHHHHHHHHHHhhcCcccCcCHHHHhhhHHHHhc
Confidence             0  00111223567889999999999999999999999999999973

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.96  E-value=1.4e-29  Score=212.50  Aligned_cols=156  Identities=24%  Similarity=0.327  Sum_probs=128.6

Q ss_pred             HHHHHHHHHHHhhhhhhhhhcCCccCCCCCcccc-CCCCcEEEeecCcceecCcCcccCcCCCcccchHHhhhcCCCchh
Q 026540            6 KKLKRRAKRAVANISIRRASMGGIELPKPERCLD-GIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSV   84 (237)
Q Consensus         6 ~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili-~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~   84 (237)
                      .++..++++++.+++|||..|++|||+||+|||+ +..++++|+|||.++.........+-|..|.|||+.....|+.++
T Consensus       415 ~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~~~tp~~t~~y~APEvl~~~~yt~ac  494 (612)
T KOG0603|consen  415 SEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERSCDTPALTLQYVAPEVLAIQEYTEAC  494 (612)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCeeecCCChhheeecCCCCcEEEEEechhhhCchhhcccchhhcccChhhhccCCCCcch
Confidence            5778899999999999999999999999999999 588999999999987665554455668899999999988899999


Q ss_pred             hhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCchhHHh
Q 026540           85 DMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLL  164 (237)
Q Consensus        85 diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (237)
                      |+||+|+++|+|++|+.||....      ..  .+.+.++ +                                      
T Consensus       495 D~WSLGvlLy~ML~G~tp~~~~P------~~--~ei~~~i-~--------------------------------------  527 (612)
T KOG0603|consen  495 DWWSLGVLLYEMLTGRTLFAAHP------AG--IEIHTRI-Q--------------------------------------  527 (612)
T ss_pred             hhHHHHHHHHHHHhCCCccccCC------ch--HHHHHhh-c--------------------------------------
Confidence            99999999999999999997653      11  1111111 0                                      


Q ss_pred             hhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccC
Q 026540          165 VDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNS  210 (237)
Q Consensus       165 ~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~  210 (237)
                        ...+....+.++.+|+..||+.||.+|++++|+..||||.....
T Consensus       528 --~~~~s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h~w~~~~~t  571 (612)
T KOG0603|consen  528 --MPKFSECVSDEAKDLLQQLLQVDPALRLGADEIGAHPWFLSHPT  571 (612)
T ss_pred             --CCccccccCHHHHHHHHHhccCChhhCcChhhhccCcchhcCCC
Confidence              11122567899999999999999999999999999999944443

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=99.96  E-value=5e-29  Score=205.92  Aligned_cols=196  Identities=25%  Similarity=0.370  Sum_probs=144.7

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcCcccCcCCCcccchHHhhhc-CC
Q 026540            2 TIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRA-GY   80 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~PE~~~~~-~~   80 (237)
                      .+++..+..++.|++.||.|+|..++.||||||+||+++.++.++++|||++...........++..|++||.+.+. .+
T Consensus       113 ~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll~~~~~~kL~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  192 (342)
T cd07879         113 PLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTRWYRAPEVILNWMHY  192 (342)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCCCCcCCCCCCCCceeeecccChhhhcCcccc
Confidence            36788899999999999999999999999999999999999999999999987654444445668889999998764 57


Q ss_pred             CchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCch--hhhcccCccchhccccCC
Q 026540           81 SFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSK--DYFDRHGDLKRIRRLKFW  158 (237)
Q Consensus        81 ~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~  158 (237)
                      +.++|+||+|++++++++|+.||.+.      .....+..+....+...+.+........  .+...         ....
T Consensus       193 ~~~~Dv~slGvil~el~~g~~pf~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~  257 (342)
T cd07879         193 NQTVDIWSVGCIMAEMLTGKTLFKGK------DYLDQLTQILKVTGVPGPEFVQKLEDKAAKSYIKS---------LPKY  257 (342)
T ss_pred             CchHHHHHHHHHHHHHHhCCCCCCCC------CHHHHHHHHHHhcCCCCHHHHHHhcccchHHHHhh---------cCCc
Confidence            88999999999999999999999765      2455566666666655555433221110  00000         0000


Q ss_pred             chhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccCCccccc
Q 026540          159 SLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNSTRDETK  216 (237)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~~~~~~~  216 (237)
                      +.....    ......+..+.+||.+||+.||.+||++++++.||||........+++
T Consensus       258 ~~~~~~----~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~~~~~~~~  311 (342)
T cd07879         258 PRKDFS----TLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFRDADEETE  311 (342)
T ss_pred             ccchHH----HHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhcccccccCC
Confidence            000000    001123567889999999999999999999999999998865544443

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]

Probab=99.96  E-value=2.3e-29  Score=206.45  Aligned_cols=153  Identities=17%  Similarity=0.186  Sum_probs=125.1

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhc-CCccCCCCCccccCCCC-cEEEeecCcceecC---cCcccCcCCCcccchHHhh-
Q 026540            3 IVEKKLKRRAKRAVANISIRRASM-GGIELPKPERCLDGIDM-RCKVVDFGNACRAN---KQFAEEIQTRQYRAPEVIL-   76 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~-~~h~d~kp~Nili~~~~-~~kl~dfg~~~~~~---~~~~~~~~~~~~~~PE~~~-   76 (237)
                      ++...+.+++.+|++||.|+|+.+ |+||||||+|||++.+. ++||+|||+++...   ...+...||..|||||++. 
T Consensus       139 l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~~~~~~~~GT~~wMAPEv~~~  218 (362)
T KOG0192|consen  139 LPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVISKTSMTSVAGTYRWMAPEVLRG  218 (362)
T ss_pred             CCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEEcCCCCEEEECCCccceeeccccccccCCCCCccccChhhhcC
Confidence            567889999999999999999999 99999999999999997 99999999997654   3344468899999999999 


Q ss_pred             -hcCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccc
Q 026540           77 -RAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRL  155 (237)
Q Consensus        77 -~~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (237)
                       ...|+.++|+||||+++||+++|..||....      .   .+....+..                             
T Consensus       219 ~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~------~---~~~~~~v~~-----------------------------  260 (362)
T KOG0192|consen  219 EKSPYTEKSDVYSFGIVLWELLTGEIPFEDLA------P---VQVASAVVV-----------------------------  260 (362)
T ss_pred             CCCcCCccchhhhHHHHHHHHHHCCCCCCCCC------H---HHHHHHHHh-----------------------------
Confidence             5689999999999999999999999998763      1   111111100                             


Q ss_pred             cCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhc
Q 026540          156 KFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ  201 (237)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  201 (237)
                              -..+...+..+++.+..++.+|++.||.+||++.+++.
T Consensus       261 --------~~~Rp~~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~  298 (362)
T KOG0192|consen  261 --------GGLRPPIPKECPPHLSSLMERCWLVDPSRRPSFLEIVS  298 (362)
T ss_pred             --------cCCCCCCCccCCHHHHHHHHHhCCCCCCcCCCHHHHHH
Confidence                    00112234457889999999999999999999999876

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=99.96  E-value=2.4e-30  Score=212.35  Aligned_cols=159  Identities=19%  Similarity=0.201  Sum_probs=127.6

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecC---cCcccCcCCCcccchHHhhhcC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRAN---KQFAEEIQTRQYRAPEVILRAG   79 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~---~~~~~~~~~~~~~~PE~~~~~~   79 (237)
                      +++.++..++.|++.||+|+|..+++||||||+|||++.++.++|+|||++....   .......|++.|+|||++.+..
T Consensus        93 ~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~  172 (325)
T cd05604          93 FPEPRARFYAAEIASALGYLHSINIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSDTTTTFCGTPEYLAPEVIRKQP  172 (325)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEeecCCcccCCCCCCCcccccCChhhCCHHHHcCCC
Confidence            6788999999999999999999999999999999999999999999999875421   2233456889999999999888


Q ss_pred             CCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCc
Q 026540           80 YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWS  159 (237)
Q Consensus        80 ~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (237)
                      ++.++|+||+||++++|++|..||....      .......+.+                                    
T Consensus       173 ~~~~~DvwslG~il~el~~G~~pf~~~~------~~~~~~~~~~------------------------------------  210 (325)
T cd05604         173 YDNTVDWWCLGAVLYEMLYGLPPFYCRD------VAEMYDNILH------------------------------------  210 (325)
T ss_pred             CCCcCccccccceehhhhcCCCCCCCCC------HHHHHHHHHc------------------------------------
Confidence            9999999999999999999999997552      1111111100                                    


Q ss_pred             hhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCH----HHHhcCCCcCccc
Q 026540          160 LDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTA----QQCLQHPWLSLRN  209 (237)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~----~ell~hp~f~~~~  209 (237)
                            .........+..+.+++.+||+.+|.+||++    .++++||||....
T Consensus       211 ------~~~~~~~~~~~~~~~ll~~ll~~~p~~R~~~~~~~~~i~~h~~f~~~~  258 (325)
T cd05604         211 ------KPLVLRPGASLTAWSILEELLEKDRQRRLGAKEDFLEIQEHPFFESLS  258 (325)
T ss_pred             ------CCccCCCCCCHHHHHHHHHHhccCHHhcCCCCCCHHHHhcCCCcCCCC
Confidence                  0111122346778899999999999999976    5999999999754

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=99.96  E-value=8.4e-30  Score=208.97  Aligned_cols=160  Identities=18%  Similarity=0.219  Sum_probs=129.3

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCc---CcccCcCCCcccchHHhhhcC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK---QFAEEIQTRQYRAPEVILRAG   79 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~---~~~~~~~~~~~~~PE~~~~~~   79 (237)
                      +++.++..++.|++.||.|+|..+++||||||+||+++.++.++|+|||++.....   ......|++.|+|||++.+..
T Consensus        98 l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~  177 (323)
T cd05615          98 FKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDGVTTRTFCGTPDYIAPEIIAYQP  177 (323)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeccccccccCCCCccccCccCCccccCHHHHcCCC
Confidence            67899999999999999999999999999999999999999999999998864321   122346789999999998888


Q ss_pred             CCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCc
Q 026540           80 YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWS  159 (237)
Q Consensus        80 ~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (237)
                      ++.++|+||+|++++++++|..||.+..      .......+..                                    
T Consensus       178 ~~~~~DiwslGvil~elltG~~pf~~~~------~~~~~~~i~~------------------------------------  215 (323)
T cd05615         178 YGKSVDWWAYGVLLYEMLAGQPPFDGED------EDELFQSIME------------------------------------  215 (323)
T ss_pred             CCCccchhhhHHHHHHHHhCCCCCCCCC------HHHHHHHHHh------------------------------------
Confidence            9999999999999999999999997652      2122211111                                    


Q ss_pred             hhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCC-----HHHHhcCCCcCcccC
Q 026540          160 LDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPT-----AQQCLQHPWLSLRNS  210 (237)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t-----~~ell~hp~f~~~~~  210 (237)
                            .....+...+..+.+++.+||+.+|.+|++     .+++++||||...++
T Consensus       216 ------~~~~~p~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~f~~~~~  265 (323)
T cd05615         216 ------HNVSYPKSLSKEAVSICKGLMTKHPSKRLGCGPEGERDIREHAFFRRIDW  265 (323)
T ss_pred             ------CCCCCCccCCHHHHHHHHHHcccCHhhCCCCCCCCHHHHhcCcccCCCCH
Confidence                  111223344677889999999999999997     579999999998754

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=99.96  E-value=5.5e-30  Score=210.19  Aligned_cols=160  Identities=19%  Similarity=0.207  Sum_probs=128.4

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecC---cCcccCcCCCcccchHHhhhcC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRAN---KQFAEEIQTRQYRAPEVILRAG   79 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~---~~~~~~~~~~~~~~PE~~~~~~   79 (237)
                      +.+.++..++.|++.||.|+|..+++||||||+||+++.++.++|+|||++....   .......|++.|+|||++.+..
T Consensus        93 ~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~  172 (325)
T cd05602          93 FLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNGTTSTFCGTPEYLAPEVLHKQP  172 (325)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEEccCCCCcccccCCCCcccccCCccccCHHHHcCCC
Confidence            5678889999999999999999999999999999999999999999999885432   2233456899999999999888


Q ss_pred             CCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCc
Q 026540           80 YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWS  159 (237)
Q Consensus        80 ~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (237)
                      ++.++|+||+||+++++++|..||....      .......+..                                    
T Consensus       173 ~~~~~DiwslG~il~el~~g~~pf~~~~------~~~~~~~i~~------------------------------------  210 (325)
T cd05602         173 YDRTVDWWCLGAVLYEMLYGLPPFYSRN------TAEMYDNILN------------------------------------  210 (325)
T ss_pred             CCCccccccccHHHHHHhcCCCCCCCCC------HHHHHHHHHh------------------------------------
Confidence            9999999999999999999999997653      2121111110                                    


Q ss_pred             hhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHH----HHhcCCCcCcccC
Q 026540          160 LDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQ----QCLQHPWLSLRNS  210 (237)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~----ell~hp~f~~~~~  210 (237)
                            .....+...+..+.+++.+||+.||.+|+++.    ++++|+||...++
T Consensus       211 ------~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~i~~~~~~~~~~~  259 (325)
T cd05602         211 ------KPLQLKPNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKNHIFFSPINW  259 (325)
T ss_pred             ------CCcCCCCCCCHHHHHHHHHHcccCHHHCCCCCCCHHHHhcCcccCCCCH
Confidence                  01112234567889999999999999999866    8999999986543

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=99.96  E-value=3e-30  Score=212.18  Aligned_cols=159  Identities=25%  Similarity=0.290  Sum_probs=126.1

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecC---cCcccCcCCCcccchHHhhhc-
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRAN---KQFAEEIQTRQYRAPEVILRA-   78 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~---~~~~~~~~~~~~~~PE~~~~~-   78 (237)
                      +++.+++.++.|++.||+|+|..+++||||||+|||++.++.++|+|||++....   .......|+..|+|||.+.+. 
T Consensus        93 ~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~  172 (330)
T cd05586          93 FSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLDATGHIALCDFGLSKANLTDNKTTNTFCGTTEYLAPEVLLDEK  172 (330)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCCCCccCccCCccccCHHHHcCCC
Confidence            6788999999999999999999999999999999999999999999999885432   223345689999999999765 


Q ss_pred             CCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCC
Q 026540           79 GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFW  158 (237)
Q Consensus        79 ~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (237)
                      .++.++|+||+||++++|++|..||....      .......+..                                   
T Consensus       173 ~~~~~~DvwslGvil~elltG~~Pf~~~~------~~~~~~~i~~-----------------------------------  211 (330)
T cd05586         173 GYTKHVDFWSLGVLVFEMCCGWSPFYAED------TQQMYRNIAF-----------------------------------  211 (330)
T ss_pred             CCCCccceeccccEEEEeccCCCCCCCCC------HHHHHHHHHc-----------------------------------
Confidence            47899999999999999999999997642      1111111100                                   


Q ss_pred             chhHHhhhhcCCC-HHhHHHHHHHHHhccccCCCCCC----CHHHHhcCCCcCccc
Q 026540          159 SLDRLLVDKYRFS-ETDAREFAEFLVPLLDFTPEKRP----TAQQCLQHPWLSLRN  209 (237)
Q Consensus       159 ~~~~~~~~~~~~~-~~~~~~~~~li~~~L~~dP~~R~----t~~ell~hp~f~~~~  209 (237)
                             .....+ ...+..+.+|+.+||+.||.+|+    ++.++++||||....
T Consensus       212 -------~~~~~~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~h~~~~~~~  260 (330)
T cd05586         212 -------GKVRFPKNVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKEHPFFADID  260 (330)
T ss_pred             -------CCCCCCCccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhcCccccCCC
Confidence                   000011 12456788999999999999998    799999999998654

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=99.96  E-value=1.7e-29  Score=209.57  Aligned_cols=163  Identities=25%  Similarity=0.301  Sum_probs=124.9

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC---cccCcCCCcccchHHhhhc-
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ---FAEEIQTRQYRAPEVILRA-   78 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~~~~PE~~~~~-   78 (237)
                      +.+..+..++.|++.||.|+|..+++||||||+|||++.++.+||+|||++......   .....|+..|++||.+... 
T Consensus       165 ~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~  244 (353)
T PLN00034        165 ADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTMDPCNSSVGTIAYMSPERINTDL  244 (353)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEcccccceecccccccccccccCccccCcccccccc
Confidence            457788899999999999999999999999999999999999999999998654422   2345789999999987532 


Q ss_pred             ----CCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcc
Q 026540           79 ----GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRR  154 (237)
Q Consensus        79 ----~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (237)
                          ..+.++|+||+||+++++++|+.||....      ..+....+..+.                             
T Consensus       245 ~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~------~~~~~~~~~~~~-----------------------------  289 (353)
T PLN00034        245 NHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGR------QGDWASLMCAIC-----------------------------  289 (353)
T ss_pred             ccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCC------CccHHHHHHHHh-----------------------------
Confidence                23568999999999999999999996332      001111110000                             


Q ss_pred             ccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCccc
Q 026540          155 LKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRN  209 (237)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~  209 (237)
                               .......+..++.++.+||.+||+.||++|||++|+++||||....
T Consensus       290 ---------~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~hp~~~~~~  335 (353)
T PLN00034        290 ---------MSQPPEAPATASREFRHFISCCLQREPAKRWSAMQLLQHPFILRAQ  335 (353)
T ss_pred             ---------ccCCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHhcCcccccCC
Confidence                     0000112234567899999999999999999999999999999764

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=99.96  E-value=3.1e-29  Score=206.05  Aligned_cols=195  Identities=25%  Similarity=0.374  Sum_probs=147.3

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC------cccCcCCCcccchHHhh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ------FAEEIQTRQYRAPEVIL   76 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~------~~~~~~~~~~~~PE~~~   76 (237)
                      +++..+..++.+++.||.++|..++.|+||||+||+++.++.++|+|||.+......      .....++..|++||.+.
T Consensus       100 l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  179 (330)
T cd07834         100 LTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVNSNCDLKICDFGLARGVDPDEDEKGFLTEYVVTRWYRAPELLL  179 (330)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEcccCceEeecccccccccccccccccCcCCceeee
Confidence            578889999999999999999999999999999999999999999999998654322      23446688899999998


Q ss_pred             hc-CCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCC--CchhhhcccCccchhc
Q 026540           77 RA-GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGA--QSKDYFDRHGDLKRIR  153 (237)
Q Consensus        77 ~~-~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~  153 (237)
                      +. .++.++|+||+|++++++++|..||.+..      .......+.+..+.++........  ....+....+.     
T Consensus       180 ~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~------~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----  248 (330)
T cd07834         180 SSSRYTKAIDIWSVGCIFAELLTRKPLFPGRD------YIDQLNLIVEVLGTPSEEDLKFITSEKARNYLKSLPK-----  248 (330)
T ss_pred             cccCCCcchhHHHHHHHHHHHHcCCCCcCCCC------HHHHHHHHHHhcCCCChhHhhhccccchhhHHhhccc-----
Confidence            87 78899999999999999999999998763      556667777777776655443111  11111110000     


Q ss_pred             cccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccCCccccc
Q 026540          154 RLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNSTRDETK  216 (237)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~~~~~~~  216 (237)
                       ....+..       ......+..+.+|+.+||+.+|.+|||++++++||||.+......+..
T Consensus       249 -~~~~~~~-------~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~~~~~~~~  303 (330)
T cd07834         249 -KPKKPLS-------KLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQLHDPEDEPV  303 (330)
T ss_pred             -CCcchhH-------HhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhhcccccCCC
Confidence             0000000       112235778999999999999999999999999999998876655433

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.96  E-value=7.1e-30  Score=215.96  Aligned_cols=165  Identities=27%  Similarity=0.355  Sum_probs=135.9

Q ss_pred             hHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCC-CCcEEEeecCcceecC---cCcccCcCCCcccchHHhhhc-
Q 026540            4 VEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGI-DMRCKVVDFGNACRAN---KQFAEEIQTRQYRAPEVILRA-   78 (237)
Q Consensus         4 ~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~-~~~~kl~dfg~~~~~~---~~~~~~~~~~~~~~PE~~~~~-   78 (237)
                      +|+.+..|-+||++||.|+|..+|+|||||-+|+||+. .|.+||+|||-+.+.-   .....+.||.-|||||++-.+ 
T Consensus       673 NEstm~fYtkQILeGLkYLHen~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAginP~TETFTGTLQYMAPEvIDqG~  752 (1226)
T KOG4279|consen  673 NESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEVIDQGP  752 (1226)
T ss_pred             chhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEEeeccceEEecccccchhhccCCccccccccchhhhChHhhccCC
Confidence            78999999999999999999999999999999999987 6899999999886532   344567889999999999977 


Q ss_pred             -CCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccC
Q 026540           79 -GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKF  157 (237)
Q Consensus        79 -~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (237)
                       +|+.++|||||||.+.||.||++||.-..        ...+.|+++                .+|..            
T Consensus       753 RGYG~aADIWS~GCT~vEMATGrPPF~Elg--------spqAAMFkV----------------GmyKv------------  796 (1226)
T KOG4279|consen  753 RGYGKAADIWSFGCTMVEMATGRPPFVELG--------SPQAAMFKV----------------GMYKV------------  796 (1226)
T ss_pred             cCCCchhhhhhccceeEeeccCCCCeeecC--------ChhHhhhhh----------------cceec------------
Confidence             48999999999999999999999997543        111222221                12211            


Q ss_pred             CchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccCCcc
Q 026540          158 WSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNSTRD  213 (237)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~~~~  213 (237)
                               ...+|.+++.++.+||.+|+..||..||+|.++|++||+...+.+..
T Consensus       797 ---------HP~iPeelsaeak~FilrcFepd~~~R~sA~~LL~DpFlq~~~kk~r  843 (1226)
T KOG4279|consen  797 ---------HPPIPEELSAEAKNFILRCFEPDPCDRPSAKDLLQDPFLQHNNKKPR  843 (1226)
T ss_pred             ---------CCCCcHHHHHHHHHHHHHHcCCCcccCccHHHhccCcccccCCCCCC
Confidence                     23457788999999999999999999999999999999997744433

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=99.96  E-value=1.6e-29  Score=217.77  Aligned_cols=159  Identities=21%  Similarity=0.176  Sum_probs=128.7

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCc-----CcccCcCCCcccchHHhhh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK-----QFAEEIQTRQYRAPEVILR   77 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~-----~~~~~~~~~~~~~PE~~~~   77 (237)
                      +++..+..++.|++.||+|+|..+++||||||+|||++.++.+||+|||++.....     ......|++.|+|||.+.+
T Consensus       140 l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~  219 (496)
T PTZ00283        140 FREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILLCSNGLVKLGDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRR  219 (496)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEeCCCCEEEEecccCeeccccccccccccccCCcceeCHHHhCC
Confidence            57888999999999999999999999999999999999999999999999865432     1234568999999999998


Q ss_pred             cCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccC
Q 026540           78 AGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKF  157 (237)
Q Consensus        78 ~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (237)
                      ..++.++|+||+|+++|++++|..||.+..      ..........  +                               
T Consensus       220 ~~~s~k~DVwSlGvilyeLltG~~Pf~~~~------~~~~~~~~~~--~-------------------------------  260 (496)
T PTZ00283        220 KPYSKKADMFSLGVLLYELLTLKRPFDGEN------MEEVMHKTLA--G-------------------------------  260 (496)
T ss_pred             CCCCcHHHHHHHHHHHHHHHHCCCCCCCCC------HHHHHHHHhc--C-------------------------------
Confidence            889999999999999999999999997542      1111111100  0                               


Q ss_pred             CchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcc
Q 026540          158 WSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLR  208 (237)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~  208 (237)
                              .....+...++++.+++.+||+.||.+||++.++++|||++..
T Consensus       261 --------~~~~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~p~~~~~  303 (496)
T PTZ00283        261 --------RYDPLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNMPICKLF  303 (496)
T ss_pred             --------CCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHhCHHHHHh
Confidence                    0011233456789999999999999999999999999998754

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=99.96  E-value=2.1e-29  Score=203.06  Aligned_cols=167  Identities=22%  Similarity=0.258  Sum_probs=131.9

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCc--CcccCcCCCcccchHHhhhcCC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK--QFAEEIQTRQYRAPEVILRAGY   80 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~--~~~~~~~~~~~~~PE~~~~~~~   80 (237)
                      +++..+..++.|++.||.|+|+.+++|+||||+||+++.++.++|+|||++.....  ......++..|++||.+.+..+
T Consensus        99 ~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  178 (285)
T cd05605          99 FDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILLDDYGHIRISDLGLAVEIPEGETIRGRVGTVGYMAPEVVKNERY  178 (285)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHEEECCCCCEEEeeCCCceecCCCCccccccCCCCccCcHHhcCCCC
Confidence            67889999999999999999999999999999999999999999999999865432  2233467889999999988889


Q ss_pred             CchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCch
Q 026540           81 SFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSL  160 (237)
Q Consensus        81 ~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (237)
                      +.++|+||+|++++++++|..||.+..      .......+....                                   
T Consensus       179 ~~~~Diws~G~~l~el~~g~~pf~~~~------~~~~~~~~~~~~-----------------------------------  217 (285)
T cd05605         179 TFSPDWWGLGCLIYEMIEGKSPFRQRK------EKVKREEVERRV-----------------------------------  217 (285)
T ss_pred             CccccchhHHHHHHHHHHCCCCCCCCc------hhhHHHHHHHHh-----------------------------------
Confidence            999999999999999999999997653      111111111100                                   


Q ss_pred             hHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCC-----CHHHHhcCCCcCcccCCcc
Q 026540          161 DRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRP-----TAQQCLQHPWLSLRNSTRD  213 (237)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~-----t~~ell~hp~f~~~~~~~~  213 (237)
                         .......+...+..+.+|+.+||+.||.+||     +++++++||||...++...
T Consensus       218 ---~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~~~~~~  272 (285)
T cd05605         218 ---KEDQEEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAHPFFRTANFKRL  272 (285)
T ss_pred             ---hhcccccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcCcCccCCCHHHH
Confidence               0001112334567789999999999999999     9999999999998665544

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=99.96  E-value=4.2e-30  Score=210.31  Aligned_cols=160  Identities=24%  Similarity=0.301  Sum_probs=130.1

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC---cccCcCCCcccchHHhhhcC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ---FAEEIQTRQYRAPEVILRAG   79 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~~~~PE~~~~~~   79 (237)
                      +++.++..++.|++.||.|+|..+++||||||+||+++.++.++|+|||++......   .....|+..|++||.+.+..
T Consensus        95 l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~  174 (318)
T cd05582          95 FTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRG  174 (318)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEECCCCcEEEeeccCCcccCCCCCceecccCChhhcCHHHHcCCC
Confidence            678899999999999999999999999999999999999999999999988654322   23456789999999998888


Q ss_pred             CCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCc
Q 026540           80 YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWS  159 (237)
Q Consensus        80 ~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (237)
                      ++.++|+||+|++++++++|..||....      .......+                                      
T Consensus       175 ~~~~~DiwslG~il~el~tg~~p~~~~~------~~~~~~~i--------------------------------------  210 (318)
T cd05582         175 HTQSADWWSFGVLMFEMLTGSLPFQGKD------RKETMTMI--------------------------------------  210 (318)
T ss_pred             CCCccceeccceEeeeeccCCCCCCCCC------HHHHHHHH--------------------------------------
Confidence            8999999999999999999999997542      11111111                                      


Q ss_pred             hhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCC-----HHHHhcCCCcCcccC
Q 026540          160 LDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPT-----AQQCLQHPWLSLRNS  210 (237)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t-----~~ell~hp~f~~~~~  210 (237)
                          .......+...+..+.+|+.+||+.||++||+     +.+++.||||....+
T Consensus       211 ----~~~~~~~p~~~~~~~~~li~~~l~~~P~~R~~a~~~~~~~~~~~~~~~~~~~  262 (318)
T cd05582         211 ----LKAKLGMPQFLSPEAQSLLRALFKRNPANRLGAGPDGVEEIKRHPFFSTIDW  262 (318)
T ss_pred             ----HcCCCCCCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhCCCCcCCCCH
Confidence                11112233445678899999999999999999     788999999987644

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=99.96  E-value=9.5e-30  Score=209.19  Aligned_cols=163  Identities=23%  Similarity=0.285  Sum_probs=126.2

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC----cccCcCCCcccchHHhh--
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ----FAEEIQTRQYRAPEVIL--   76 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~----~~~~~~~~~~~~PE~~~--   76 (237)
                      +++..+..++.|++.||+|+|..+++||||||+||+++.++.++|+|||++......    .....+++.|+|||++.  
T Consensus        99 l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  178 (330)
T cd05601          99 FDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLIDRTGHIKLADFGSAARLTANKMVNSKLPVGTPDYIAPEVLTTM  178 (330)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCeEcccCchHheEECCCCCEEeccCCCCeECCCCCceeeecccCCccccCHHHhccc
Confidence            678889999999999999999999999999999999999999999999998654322    12346789999999987  


Q ss_pred             ----hcCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchh
Q 026540           77 ----RAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRI  152 (237)
Q Consensus        77 ----~~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (237)
                          ...++.++|+||+|++++++++|..||...+      .......+....            .   .          
T Consensus       179 ~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~------~~~~~~~i~~~~------------~---~----------  227 (330)
T cd05601         179 NGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGT------SAKTYNNIMNFQ------------R---F----------  227 (330)
T ss_pred             cccccCCCCCcceeecccceeeeeccCCCCCCCCC------HHHHHHHHHcCC------------C---c----------
Confidence                3457789999999999999999999997553      222222111100            0   0          


Q ss_pred             ccccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccC
Q 026540          153 RRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNS  210 (237)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~  210 (237)
                                 .  ........+..+.+|+..||. +|.+|+|+.++++||||...++
T Consensus       228 -----------~--~~~~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~h~~~~~~~~  271 (330)
T cd05601         228 -----------L--KFPEDPKVSSDFLDLIQSLLC-GQKERLGYEGLCCHPFFSKIDW  271 (330)
T ss_pred             -----------c--CCCCCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhCCCCcCCCCH
Confidence                       0  000111246778899999998 9999999999999999997544

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.96  E-value=1.3e-29  Score=211.10  Aligned_cols=163  Identities=20%  Similarity=0.257  Sum_probs=126.5

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC-----------------------
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ-----------------------   59 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~-----------------------   59 (237)
                      +++.++..++.|++.||.|+|..+++||||||+|||++.++.++|+|||++......                       
T Consensus        98 l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  177 (364)
T cd05599          98 FTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTEFYRILSHALPSNFLDFISK  177 (364)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEeecccceeccccccccccccccccccccccccccc
Confidence            678999999999999999999999999999999999999999999999987543211                       


Q ss_pred             ------------------cccCcCCCcccchHHhhhcCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHH
Q 026540           60 ------------------FAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALM  121 (237)
Q Consensus        60 ------------------~~~~~~~~~~~~PE~~~~~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~  121 (237)
                                        ....+||+.|+|||++....++.++|+||+||+++++++|..||....      .......+
T Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G~~Pf~~~~------~~~~~~~i  251 (364)
T cd05599         178 PMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGYPPFCSDN------PQETYRKI  251 (364)
T ss_pred             cccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcCCCCCCCCC------HHHHHHHH
Confidence                              012358999999999988889999999999999999999999997653      21111111


Q ss_pred             HHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCC---HHH
Q 026540          122 MELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPT---AQQ  198 (237)
Q Consensus       122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t---~~e  198 (237)
                      ....            ..         .                 ........++.+.+||.+||. +|.+|++   ++|
T Consensus       252 ~~~~------------~~---------~-----------------~~~~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~  292 (364)
T cd05599         252 INWK------------ET---------L-----------------QFPDEVPLSPEAKDLIKRLCC-EAERRLGNNGVNE  292 (364)
T ss_pred             HcCC------------Cc---------c-----------------CCCCCCCCCHHHHHHHHHHcc-CHhhcCCCCCHHH
Confidence            1000            00         0                 000011246788899999997 8999998   999


Q ss_pred             HhcCCCcCcccC
Q 026540          199 CLQHPWLSLRNS  210 (237)
Q Consensus       199 ll~hp~f~~~~~  210 (237)
                      +++||||+..++
T Consensus       293 ll~h~~~~~~~~  304 (364)
T cd05599         293 IKSHPFFKGVDW  304 (364)
T ss_pred             HhcCCCcCCCCH
Confidence            999999997754

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]

Probab=99.96  E-value=7.4e-30  Score=209.57  Aligned_cols=201  Identities=28%  Similarity=0.476  Sum_probs=157.6

Q ss_pred             ChhhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCC-CcEEEeecCcceecCcC-cccCcCCCcccchHHhhhc
Q 026540            1 MTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGID-MRCKVVDFGNACRANKQ-FAEEIQTRQYRAPEVILRA   78 (237)
Q Consensus         1 ~~~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~-~~~kl~dfg~~~~~~~~-~~~~~~~~~~~~PE~~~~~   78 (237)
                      +||.-+....|+.|++=||..|..-++.|.||||.|||++.+ ..+||||||.|...+.+ .+++..+..|+|||++.+.
T Consensus       531 vGL~ikaVRsYaqQLflALklLK~c~vlHaDIKPDNiLVNE~k~iLKLCDfGSA~~~~eneitPYLVSRFYRaPEIiLG~  610 (752)
T KOG0670|consen  531 VGLHIKAVRSYAQQLFLALKLLKKCGVLHADIKPDNILVNESKNILKLCDFGSASFASENEITPYLVSRFYRAPEIILGL  610 (752)
T ss_pred             cceeehHHHHHHHHHHHHHHHHHhcCeeecccCccceEeccCcceeeeccCccccccccccccHHHHHHhccCcceeecC
Confidence            578889999999999999999999999999999999999875 57899999999766643 5666778899999999999


Q ss_pred             CCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhccc--------Cccc
Q 026540           79 GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRH--------GDLK  150 (237)
Q Consensus        79 ~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~  150 (237)
                      +|..+.|+||+||++|++.+|+.+|.+.+      +..++.+++++.|++|..+.-.......-|+..        ..+.
T Consensus       611 ~yd~~iD~WSvgctLYElYtGkIlFpG~T------NN~MLrl~me~KGk~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT  684 (752)
T KOG0670|consen  611 PYDYPIDTWSVGCTLYELYTGKILFPGRT------NNQMLRLFMELKGKFPNKMLRKGQFKDQHFDQDLNFLYIEVDKVT  684 (752)
T ss_pred             cccCCccceeeceeeEEeeccceecCCCC------cHHHHHHHHHhcCCCcHHHhhhcchhhhhcccccceEEEeccccc
Confidence            99999999999999999999999999986      788999999999999999876555443332221        1111


Q ss_pred             hhcc---c-cCCc---hhHHhhhhcCCCH---HhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCc
Q 026540          151 RIRR---L-KFWS---LDRLLVDKYRFSE---TDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSL  207 (237)
Q Consensus       151 ~~~~---~-~~~~---~~~~~~~~~~~~~---~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~  207 (237)
                      ....   + ...|   +...+...-..++   ....++.+|+.+||.+||++|.|..|+|+||||..
T Consensus       685 ~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~LdP~KRit~nqAL~HpFi~~  751 (752)
T KOG0670|consen  685 EREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILDPEKRITVNQALKHPFITE  751 (752)
T ss_pred             cceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhccChhhcCCHHHHhcCCcccC
Confidence            1000   0 0111   2222222112232   33568999999999999999999999999999974

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=99.96  E-value=2.5e-29  Score=209.78  Aligned_cols=164  Identities=18%  Similarity=0.230  Sum_probs=127.3

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC----cccCcCCCcccchHHhhhc
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ----FAEEIQTRQYRAPEVILRA   78 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~----~~~~~~~~~~~~PE~~~~~   78 (237)
                      +++..+..++.|++.||+|+|+.+++||||||+|||++.++.+||+|||++......    .....|++.|+|||++.+.
T Consensus       139 l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  218 (370)
T cd05596         139 IPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDANGMVRCDTAVGTPDYISPEVLKSQ  218 (370)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEcCCCCEEEEeccceeeccCCCcccCCCCCCCcCeECHHHhccC
Confidence            578889999999999999999999999999999999999999999999998654321    2345689999999998753


Q ss_pred             ----CCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcc
Q 026540           79 ----GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRR  154 (237)
Q Consensus        79 ----~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (237)
                          .++.++|+||+||+++++++|..||.+..      .......+......+                          
T Consensus       219 ~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~------~~~~~~~i~~~~~~~--------------------------  266 (370)
T cd05596         219 GGDGYYGRECDWWSVGVFLYEMLVGDTPFYADS------LVGTYSKIMDHKNSL--------------------------  266 (370)
T ss_pred             CCCCCCCCceeeeehhHHHHHHHhCCCCcCCCC------HHHHHHHHHcCCCcC--------------------------
Confidence                37889999999999999999999997653      111111111100000                          


Q ss_pred             ccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCC--CCCHHHHhcCCCcCcccC
Q 026540          155 LKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEK--RPTAQQCLQHPWLSLRNS  210 (237)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~--R~t~~ell~hp~f~~~~~  210 (237)
                                  ........+..+.+||.+||+.+|.+  |+|++++++||||....+
T Consensus       267 ------------~~~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h~~~~~~~~  312 (370)
T cd05596         267 ------------TFPDDIEISKQAKDLICAFLTDREVRLGRNGVDEIKSHPFFKNDQW  312 (370)
T ss_pred             ------------CCCCcCCCCHHHHHHHHHHccChhhccCCCCHHHHhcCcccCCCCh
Confidence                        00011134678899999999999987  999999999999987543

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=99.96  E-value=1.4e-29  Score=204.12  Aligned_cols=168  Identities=21%  Similarity=0.288  Sum_probs=131.3

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCc--CcccCcCCCcccchHHhhhcC
Q 026540            2 TIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK--QFAEEIQTRQYRAPEVILRAG   79 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~--~~~~~~~~~~~~~PE~~~~~~   79 (237)
                      ++++.+++.++.|++.||.|+|+.+++|+||||+||+++.++.++++|||++.....  ......++..|+|||.+.+..
T Consensus        98 ~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~  177 (285)
T cd05630          98 GFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNER  177 (285)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeccceeecCCCccccCCCCCccccChHHHcCCC
Confidence            367889999999999999999999999999999999999999999999998865432  223457789999999998888


Q ss_pred             CCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCc
Q 026540           80 YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWS  159 (237)
Q Consensus        80 ~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (237)
                      ++.++|+||+|++++++++|..||......   ........   .....                               
T Consensus       178 ~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~---~~~~~~~~---~~~~~-------------------------------  220 (285)
T cd05630         178 YTFSPDWWALGCLLYEMIAGQSPFQQRKKK---IKREEVER---LVKEV-------------------------------  220 (285)
T ss_pred             CCCccccHHHHHHHHHHHhCCCCCCCCCcc---chHHHHHh---hhhhh-------------------------------
Confidence            999999999999999999999999754210   00001100   00000                               


Q ss_pred             hhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCC-----HHHHhcCCCcCcccCCcc
Q 026540          160 LDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPT-----AQQCLQHPWLSLRNSTRD  213 (237)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t-----~~ell~hp~f~~~~~~~~  213 (237)
                             ....+...+..+.+|+.+||+.||++|+|     ++|+++||||+....+..
T Consensus       221 -------~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h~~~~~~~~~~~  272 (285)
T cd05630         221 -------QEEYSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKEHPLFKQINFKRL  272 (285)
T ss_pred             -------hhhcCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHcChhhhccCHHHH
Confidence                   00112334677899999999999999999     999999999998765543

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=99.96  E-value=1.1e-29  Score=208.17  Aligned_cols=160  Identities=21%  Similarity=0.219  Sum_probs=127.6

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecC---cCcccCcCCCcccchHHhhhcC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRAN---KQFAEEIQTRQYRAPEVILRAG   79 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~---~~~~~~~~~~~~~~PE~~~~~~   79 (237)
                      +.+.++..++.|++.||.|+|..+++||||||+||+++.++.+||+|||++....   .......|++.|+|||.+.+..
T Consensus        93 ~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~  172 (321)
T cd05603          93 FLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPEETTSTFCGTPEYLAPEVLRKEP  172 (321)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEccCCCCccCCCCCCccccccCCcccCCHHHhcCCC
Confidence            5678899999999999999999999999999999999999999999999875422   2223446789999999998888


Q ss_pred             CCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCc
Q 026540           80 YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWS  159 (237)
Q Consensus        80 ~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (237)
                      ++.++|+||+||+++++++|..||...+      .......+                                      
T Consensus       173 ~~~~~DiwslG~il~el~~g~~pf~~~~------~~~~~~~i--------------------------------------  208 (321)
T cd05603         173 YDRTVDWWCLGAVLYEMLYGLPPFYSRD------VSQMYDNI--------------------------------------  208 (321)
T ss_pred             CCCcCcccccchhhhhhhcCCCCCCCCC------HHHHHHHH--------------------------------------
Confidence            9999999999999999999999997642      11111111                                      


Q ss_pred             hhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCH----HHHhcCCCcCcccC
Q 026540          160 LDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTA----QQCLQHPWLSLRNS  210 (237)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~----~ell~hp~f~~~~~  210 (237)
                          .......+...+..+.+++.+||+.||.+|+++    .++++|+||...++
T Consensus       209 ----~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~~~~~~~~~  259 (321)
T cd05603         209 ----LHKPLQLPGGKTVAACDLLVGLLHKDQRRRLGAKADFLEIKNHVFFSPINW  259 (321)
T ss_pred             ----hcCCCCCCCCCCHHHHHHHHHHccCCHhhcCCCCCCHHHHhCCCCcCCCCH
Confidence                001112233446778899999999999999875    59999999986543

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=99.96  E-value=8.5e-29  Score=202.03  Aligned_cols=199  Identities=24%  Similarity=0.268  Sum_probs=139.0

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCC----CCcEEEeecCcceecCcCc------ccCcCCCcccc
Q 026540            2 TIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGI----DMRCKVVDFGNACRANKQF------AEEIQTRQYRA   71 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~----~~~~kl~dfg~~~~~~~~~------~~~~~~~~~~~   71 (237)
                      .+++..+..++.|++.||+|+|+.+++||||||+||+++.    ++.+|++|||++.......      ....++..|+|
T Consensus       104 ~~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~a  183 (316)
T cd07842         104 SIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILVMGEGPERGVVKIGDLGLARLFNAPLKPLADLDPVVVTIWYRA  183 (316)
T ss_pred             CcCHHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEEcCCCCccceEEECCCccccccCCCcccccccCCccccccccC
Confidence            3678889999999999999999999999999999999999    8999999999886543221      23356788999


Q ss_pred             hHHhhhc-CCCchhhhhhhhhHHHHHhcCCcccCCCCCCC---CCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccC
Q 026540           72 PEVILRA-GYSFSVDMWSFACTAFELATGDMLFAPKSGQG---FCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHG  147 (237)
Q Consensus        72 PE~~~~~-~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  147 (237)
                      ||.+.+. .++.++|+||+|++++++++|..||.......   .......+..+.+.++.+....+........+.....
T Consensus       184 PE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  263 (316)
T cd07842         184 PELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLERIFEVLGTPTEKDWPDIKKMPEYDTLMK  263 (316)
T ss_pred             HHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHHHHHHhCCCchhHHHHHhhcccchhhhh
Confidence            9998765 47889999999999999999999997664322   1123445666667776665554432222211111000


Q ss_pred             ccchhccccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCc
Q 026540          148 DLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL  205 (237)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f  205 (237)
                      ... ...........    ........+..+.+++.+||+.||++|||+.|+++||||
T Consensus       264 ~~~-~~~~~~~~~~~----~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~~~~f  316 (316)
T cd07842         264 DFK-TKTYPSNSLAK----WMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALEHPYF  316 (316)
T ss_pred             hcc-CCCCCCccHHH----HHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhcCCCC
Confidence            000 00000000000    111112446788999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=99.96  E-value=1.3e-28  Score=202.29  Aligned_cols=211  Identities=23%  Similarity=0.354  Sum_probs=158.8

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcCcccCcCCCcccchHHhhh-cCCC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILR-AGYS   81 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~PE~~~~-~~~~   81 (237)
                      +.+..+..++.|++++|.|+|..+++|+|++|+||+++.++.++++|||.+...........++..|++||.+.+ ..++
T Consensus       105 ~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  184 (328)
T cd07856         105 LEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILINENCDLKICDFGLARIQDPQMTGYVSTRYYRAPEIMLTWQKYD  184 (328)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEeECCCCCEEeCccccccccCCCcCCCcccccccCceeeeccCCcC
Confidence            456778889999999999999999999999999999999999999999998765544445567888999998866 4588


Q ss_pred             chhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCc--hhhhcccCccchhccccCCc
Q 026540           82 FSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQS--KDYFDRHGDLKRIRRLKFWS  159 (237)
Q Consensus        82 ~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~  159 (237)
                      .++|+||+|++++++++|..||...      ........+.+.++.++..+.......  ..++....      .....+
T Consensus       185 ~~~Dv~slG~il~el~tg~~~f~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~  252 (328)
T cd07856         185 VEVDIWSAGCIFAEMLEGKPLFPGK------DHVNQFSIITDLLGTPPDDVINTICSENTLRFVQSLP------KREPVP  252 (328)
T ss_pred             cHHHHHHHHHHHHHHHhCCCCCCCC------CHHHHHHHHHHHhCCCCHHHHHhccchhhHHHHhhcc------ccCCCc
Confidence            9999999999999999999999765      355666777788888877765432111  11111000      000000


Q ss_pred             hhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccCCccccccccchhhcccCCccceecc
Q 026540          160 LDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNSTRDETKNKSNVEKVDVGMSKLEIKV  235 (237)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (237)
                      ...       .....+..+.++|.+||+.+|++|||+++++.||||.....++.+..   .-++++|+....+.+|
T Consensus       253 ~~~-------~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~  318 (328)
T cd07856         253 FSE-------KFKNADPSAIDLLEKMLVFDPQKRISAAEALAHPYLAPYHDPTDEPV---AEEKFDWSFNDADLPV  318 (328)
T ss_pred             HHH-------HcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCCccccccCCccccC---chhhcCCchhcccCCH
Confidence            100       01134678899999999999999999999999999998887766644   3347888887777665

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=99.96  E-value=5.7e-29  Score=200.18  Aligned_cols=184  Identities=24%  Similarity=0.344  Sum_probs=137.4

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCc---CcccCcCCCcccchHHhhhcC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK---QFAEEIQTRQYRAPEVILRAG   79 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~---~~~~~~~~~~~~~PE~~~~~~   79 (237)
                      +++.++..++.|++.||+|+|..+++|+||+|+||+++.++.++++|||++.....   ......++..|++||.+.+..
T Consensus        97 l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  176 (284)
T cd07860          97 IPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCK  176 (284)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEeeccchhhcccCccccccccccccccCCeEEecCC
Confidence            57788999999999999999999999999999999999999999999998754432   223345577899999887654


Q ss_pred             -CCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCC
Q 026540           80 -YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFW  158 (237)
Q Consensus        80 -~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (237)
                       ++.++|+||+|++++++++|..||...      ..........+..+.++...++.......+......+      ...
T Consensus       177 ~~~~~~Dv~slG~il~~l~tg~~p~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~  244 (284)
T cd07860         177 YYSTAVDIWSLGCIFAEMVTRRALFPGD------SEIDQLFRIFRTLGTPDEVVWPGVTSLPDYKPSFPKW------ARQ  244 (284)
T ss_pred             CCCcHHHHHHHHHHHHHHHHCCCCCCCC------CHHHHHHHHHHHhCCCChhhhhhhhHHHHHHhhcccc------ccc
Confidence             588899999999999999999999765      3556666677777766655443222221111111110      000


Q ss_pred             chhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCc
Q 026540          159 SLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL  205 (237)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f  205 (237)
                      .....       ....+..+.++|.+||+.||.+|||++++++||||
T Consensus       245 ~~~~~-------~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~f  284 (284)
T cd07860         245 DFSKV-------VPPLDEDGRDLLSQMLHYDPNKRISAKAALAHPFF  284 (284)
T ss_pred             CHHHH-------cccCCHHHHHHHHHhcCCCcccCCCHHHHhcCCCC
Confidence            01111       12245678899999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=99.96  E-value=8.1e-29  Score=201.53  Aligned_cols=188  Identities=20%  Similarity=0.277  Sum_probs=137.5

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC-------cccCcCCCcccchHH
Q 026540            2 TIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ-------FAEEIQTRQYRAPEV   74 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~-------~~~~~~~~~~~~PE~   74 (237)
                      .+++.++..++.|++.||+|+|..++.|+||||+||+++.++.++|+|||++......       .....++..|+|||.
T Consensus       115 ~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~  194 (310)
T cd07865         115 KFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILITKDGILKLADFGLARAFSLSKNSKPNRYTNRVVTLWYRPPEL  194 (310)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEECCCCcEEECcCCCcccccCCcccCCCCccCcccCccccCcHH
Confidence            4678899999999999999999999999999999999999999999999988654321       123456778999999


Q ss_pred             hhhcC-CCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhc
Q 026540           75 ILRAG-YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIR  153 (237)
Q Consensus        75 ~~~~~-~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (237)
                      +.+.. ++.++|+||+|++++++++|..||.+.      .....+..+....+..+........... .+........  
T Consensus       195 ~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--  265 (310)
T cd07865         195 LLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGN------TEQHQLTLISQLCGSITPEVWPGVDKLE-LFKKMELPQG--  265 (310)
T ss_pred             hcCCcccCchhhhHHHHHHHHHHHhCCCCCCCC------CHHHHHHHHHHHhCCCChhhcccccchh-hhhhccCCCc--
Confidence            87654 688999999999999999999998765      3456666677777777766544332211 1111000000  


Q ss_pred             cccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCc
Q 026540          154 RLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL  205 (237)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f  205 (237)
                            ......... .....+..+.+||.+||+.||.+|||++++++||||
T Consensus       266 ------~~~~~~~~l-~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h~~f  310 (310)
T cd07865         266 ------QKRKVKERL-KPYVKDPHALDLIDKLLVLDPAKRIDADTALNHDFF  310 (310)
T ss_pred             ------cchhhHHhc-ccccCCHHHHHHHHHHhcCChhhccCHHHHhcCCCC
Confidence                  000000000 011124567899999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=99.96  E-value=6.1e-29  Score=202.53  Aligned_cols=190  Identities=22%  Similarity=0.249  Sum_probs=139.2

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC---cccCcCCCcccchHHhhhc-
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ---FAEEIQTRQYRAPEVILRA-   78 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~~~~PE~~~~~-   78 (237)
                      +++.++..++.|++.+|+|+|..+++|+||||+||+++.++.++|+|||.+......   .....++..|++||.+.+. 
T Consensus       105 l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  184 (309)
T cd07845         105 FSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLTDKGCLKIADFGLARTYGLPAKPMTPKVVTLWYRAPELLLGCT  184 (309)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccceeeecCCccCCCCcccccccccChhhhcCCC
Confidence            578899999999999999999999999999999999999999999999998655422   2233456789999998764 


Q ss_pred             CCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCC
Q 026540           79 GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFW  158 (237)
Q Consensus        79 ~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (237)
                      .++.++|+||+|++++++++|..||...      .....+..+....+......+........ .....    .   ...
T Consensus       185 ~~~~~~DvwslG~il~el~~g~~~f~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~----~---~~~  250 (309)
T cd07845         185 TYTTAIDMWAVGCILAELLAHKPLLPGK------SEIEQLDLIIQLLGTPNESIWPGFSDLPL-VGKFT----L---PKQ  250 (309)
T ss_pred             CcCchHHHHHHHHHHHHHHhCCCCCCCC------CHHHHHHHHHHhcCCCChhhchhhhcccc-ccccc----c---cCC
Confidence            4789999999999999999999999765      35666777777766655444322111100 00000    0   000


Q ss_pred             chhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccC
Q 026540          159 SLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNS  210 (237)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~  210 (237)
                      +.....    ......++.+.+||.+||++||++|||+++++.||||.....
T Consensus       251 ~~~~~~----~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h~~f~~~~~  298 (309)
T cd07845         251 PYNNLK----HKFPWLSEAGLRLLNFLLMYDPKKRATAEEALESSYFKEKPL  298 (309)
T ss_pred             CCCchH----HhccccCHHHHHHHHHHhcCChhhCcCHHHHhcChhhccCCC
Confidence            000000    001123677889999999999999999999999999986543

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=99.96  E-value=8.2e-29  Score=196.47  Aligned_cols=162  Identities=26%  Similarity=0.483  Sum_probs=128.2

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceec---CcCcccCcCCCcccchHHhh-hc
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRA---NKQFAEEIQTRQYRAPEVIL-RA   78 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~---~~~~~~~~~~~~~~~PE~~~-~~   78 (237)
                      +++..+..++.|++.+|.++|+.++.|+||||+||+++.++.++|+|||.+...   ........++..|+|||.+. +.
T Consensus        95 ~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  174 (260)
T PF00069_consen   95 LSEEEILKIAYQILEALAYLHSKGIVHRDIKPENILLDENGEVKLIDFGSSVKLSENNENFNPFVGTPEYMAPEVLQQGK  174 (260)
T ss_dssp             BBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEESTTSEEEESSGTTTEESTSTTSEBSSSSSSGGGSCHHHHTTTS
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            578899999999999999999999999999999999999999999999998642   23344567788999999998 66


Q ss_pred             CCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCC
Q 026540           79 GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFW  158 (237)
Q Consensus        79 ~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (237)
                      .++.++|+||+|++++++++|..||...      ........+.+.....                              
T Consensus       175 ~~~~~~Di~slG~il~~l~~~~~p~~~~------~~~~~~~~~~~~~~~~------------------------------  218 (260)
T PF00069_consen  175 KYTRKSDIWSLGIILYELLTGKLPFEES------NSDDQLEIIEKILKRP------------------------------  218 (260)
T ss_dssp             SBSTHHHHHHHHHHHHHHHHSSSSSTTS------SHHHHHHHHHHHHHTH------------------------------
T ss_pred             cccccccccccccccccccccccccccc------cchhhhhhhhhccccc------------------------------
Confidence            7899999999999999999999998754      1233333333222110                              


Q ss_pred             chhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCc
Q 026540          159 SLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL  205 (237)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f  205 (237)
                           ..............+.+++.+||+.||++|||++++++||||
T Consensus       219 -----~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~~~~~  260 (260)
T PF00069_consen  219 -----LPSSSQQSREKSEELRDLIKKMLSKDPEQRPSAEELLKHPWF  260 (260)
T ss_dssp             -----HHHHTTSHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHTSGGG
T ss_pred             -----ccccccccchhHHHHHHHHHHHccCChhHCcCHHHHhcCCCC
Confidence                 000111111123789999999999999999999999999998

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.96  E-value=1.2e-29  Score=198.16  Aligned_cols=164  Identities=23%  Similarity=0.291  Sum_probs=142.8

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCccee---cCcCcccCcCCCcccchHHhhhc
Q 026540            2 TIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACR---ANKQFAEEIQTRQYRAPEVILRA   78 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~---~~~~~~~~~~~~~~~~PE~~~~~   78 (237)
                      .++|.+++-+-..|+.||.|+|+.+|++||+|.+|.|++.+|++||.|||++..   ++......+||+.|+|||++...
T Consensus       264 ~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I~~g~t~kTFCGTPEYLAPEVleDn  343 (516)
T KOG0690|consen  264 VFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLLDKDGHIKITDFGLCKEEIKYGDTTKTFCGTPEYLAPEVLEDN  343 (516)
T ss_pred             cccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhheeccCCceEeeecccchhcccccceeccccCChhhcCchhhccc
Confidence            478999999999999999999999999999999999999999999999999853   34556678999999999999999


Q ss_pred             CCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCC
Q 026540           79 GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFW  158 (237)
Q Consensus        79 ~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (237)
                      .|+..+|.|.+|+++|+|.+|+.||+...      .....+                                       
T Consensus       344 DYgraVDWWG~GVVMYEMmCGRLPFyn~d------h~kLFe---------------------------------------  378 (516)
T KOG0690|consen  344 DYGRAVDWWGVGVVMYEMMCGRLPFYNKD------HEKLFE---------------------------------------  378 (516)
T ss_pred             cccceeehhhhhHHHHHHHhccCcccccc------hhHHHH---------------------------------------
Confidence            99999999999999999999999998763      222222                                       


Q ss_pred             chhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCC-----HHHHhcCCCcCcccCCcc
Q 026540          159 SLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPT-----AQQCLQHPWLSLRNSTRD  213 (237)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t-----~~ell~hp~f~~~~~~~~  213 (237)
                         -++.+...+|..+++++..|+..+|..||.+|+.     ++|+.+|+||...++...
T Consensus       379 ---LIl~ed~kFPr~ls~eAktLLsGLL~kdP~kRLGgGpdDakEi~~h~FF~~v~W~~~  435 (516)
T KOG0690|consen  379 ---LILMEDLKFPRTLSPEAKTLLSGLLKKDPKKRLGGGPDDAKEIMRHRFFASVDWEAT  435 (516)
T ss_pred             ---HHHhhhccCCccCCHHHHHHHHHHhhcChHhhcCCCchhHHHHHhhhhhccCCHHHH
Confidence               2233455678888999999999999999999985     899999999998877544

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=99.96  E-value=5.5e-29  Score=207.61  Aligned_cols=162  Identities=20%  Similarity=0.271  Sum_probs=124.0

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC----cccCcCCCcccchHHhhhc
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ----FAEEIQTRQYRAPEVILRA   78 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~----~~~~~~~~~~~~PE~~~~~   78 (237)
                      +.+.++..++.|++.||.|+|..+++||||||+|||++.++.+||+|||++......    .....|++.|+|||++.+.
T Consensus       139 ~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~  218 (370)
T cd05621         139 VPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVRCDTAVGTPDYISPEVLKSQ  218 (370)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEEecccceecccCCceecccCCCCcccCCHHHHhcc
Confidence            578889999999999999999999999999999999999999999999998765322    2345689999999999764


Q ss_pred             C----CCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcc
Q 026540           79 G----YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRR  154 (237)
Q Consensus        79 ~----~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (237)
                      .    ++.++|+||+||++++|++|..||...+      .......+......+                          
T Consensus       219 ~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~------~~~~~~~i~~~~~~~--------------------------  266 (370)
T cd05621         219 GGDGYYGRECDWWSVGVFLFEMLVGDTPFYADS------LVGTYSKIMDHKNSL--------------------------  266 (370)
T ss_pred             CCCCCCCcccCEEeehHHHHHHHhCCCCCCCCC------HHHHHHHHHhCCccc--------------------------
Confidence            3    7789999999999999999999997653      222222111100000                          


Q ss_pred             ccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCC--CCCHHHHhcCCCcCcc
Q 026540          155 LKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEK--RPTAQQCLQHPWLSLR  208 (237)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~--R~t~~ell~hp~f~~~  208 (237)
                                  ........+..+.+++.+||..++.+  |+|++|+++||||...
T Consensus       267 ------------~~p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~hp~~~~~  310 (370)
T cd05621         267 ------------NFPEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQHPFFKND  310 (370)
T ss_pred             ------------CCCCcccCCHHHHHHHHHHccCchhccCCCCHHHHhcCcccCCC
Confidence                        00001124677889999999855543  8899999999999864

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=99.96  E-value=3.4e-29  Score=209.82  Aligned_cols=163  Identities=20%  Similarity=0.231  Sum_probs=124.4

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCc------------------------
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK------------------------   58 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~------------------------   58 (237)
                      +++..++.++.|++.||.|+|..+++||||||+|||++.++.++|+|||++.....                        
T Consensus        98 ~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  177 (382)
T cd05625          98 FPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQSGDHVRQDSMDFSNEW  177 (382)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEeECCCCccccccccccccccccccccccccccccc
Confidence            57888999999999999999999999999999999999999999999998632110                        


Q ss_pred             --------------------------CcccCcCCCcccchHHhhhcCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCC
Q 026540           59 --------------------------QFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFC  112 (237)
Q Consensus        59 --------------------------~~~~~~~~~~~~~PE~~~~~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~  112 (237)
                                                .....+|++.|+|||++.+..++.++|+||+||++++|++|..||...+     
T Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~-----  252 (382)
T cd05625         178 GDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQPPFLAQT-----  252 (382)
T ss_pred             cccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEechHHHHHHHhCCCCCCCCC-----
Confidence                                      0012367899999999998889999999999999999999999997653     


Q ss_pred             ChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCC
Q 026540          113 EDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEK  192 (237)
Q Consensus       113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~  192 (237)
                       .......+.......                                      ........++++.++|.+|+ .+|++
T Consensus       253 -~~~~~~~i~~~~~~~--------------------------------------~~p~~~~~s~~~~~li~~l~-~~p~~  292 (382)
T cd05625         253 -PLETQMKVINWQTSL--------------------------------------HIPPQAKLSPEASDLIIKLC-RGPED  292 (382)
T ss_pred             -HHHHHHHHHccCCCc--------------------------------------CCCCcccCCHHHHHHHHHHc-cCHhH
Confidence             211111111000000                                      00011234677889999876 59999


Q ss_pred             CCC---HHHHhcCCCcCcccC
Q 026540          193 RPT---AQQCLQHPWLSLRNS  210 (237)
Q Consensus       193 R~t---~~ell~hp~f~~~~~  210 (237)
                      |++   ++++++||||...+.
T Consensus       293 R~~~~~~~ei~~hp~f~~~~~  313 (382)
T cd05625         293 RLGKNGADEIKAHPFFKTIDF  313 (382)
T ss_pred             cCCCCCHHHHhcCCCcCCcCh
Confidence            997   999999999987644

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=99.96  E-value=1.1e-28  Score=203.28  Aligned_cols=192  Identities=23%  Similarity=0.368  Sum_probs=139.7

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC------cccCcCCCcccchHHhh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ------FAEEIQTRQYRAPEVIL   76 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~------~~~~~~~~~~~~PE~~~   76 (237)
                      +++..+..++.|++.||.++|..+++||||||+||+++.++.++++|||++......      .....++..|+|||.+.
T Consensus       103 l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  182 (336)
T cd07849         103 LSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTNCDLKICDFGLARIADPEHDHTGFLTEYVATRWYRAPEIML  182 (336)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEECcccceeeccccccccCCcCCcCcCCCccChHHhh
Confidence            578889999999999999999999999999999999999999999999988654321      12346688899999886


Q ss_pred             hc-CCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCC--chhhhcccCccchhc
Q 026540           77 RA-GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQ--SKDYFDRHGDLKRIR  153 (237)
Q Consensus        77 ~~-~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~  153 (237)
                      +. .++.++|+||+|++++++++|+.||.+.      ........+...++.++.........  ...+......     
T Consensus       183 ~~~~~~~~~DvwslGvil~el~~G~~~f~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----  251 (336)
T cd07849         183 NSKGYTKAIDIWSVGCILAEMLSNRPLFPGK------DYLHQLNLILGVLGTPSQEDLNCIISLRARNYIKSLPF-----  251 (336)
T ss_pred             CCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC------CHHHHHHHHHHHcCCCCHHHHHHhhchhhhhHHhhcCc-----
Confidence            54 5789999999999999999999999765      34556666666666554433221111  0011100000     


Q ss_pred             cccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccCCcc
Q 026540          154 RLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNSTRD  213 (237)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~~~~  213 (237)
                       ....+....       ....+..+.+|+.+||+.+|++|||+.|+++||||+.......
T Consensus       252 -~~~~~~~~~-------~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~~~~~~~  303 (336)
T cd07849         252 -KPKVPWNKL-------FPNADPKALDLLDKMLTFNPHKRITVEEALAHPYLEQYHDPSD  303 (336)
T ss_pred             -CCcccHHHH-------hcccCcHHHHHHHHHcCCChhhCcCHHHHhcCccccccCCCCC
Confidence             000000000       1123667899999999999999999999999999997765433

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=99.96  E-value=4.5e-29  Score=200.40  Aligned_cols=168  Identities=20%  Similarity=0.267  Sum_probs=129.3

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC--cccCcCCCcccchHHhhhcCC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ--FAEEIQTRQYRAPEVILRAGY   80 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~--~~~~~~~~~~~~PE~~~~~~~   80 (237)
                      +++.++..++.|++.||.|+|..+++||||||+||+++.++.++|+|||++......  .....++..|+|||.+.+..+
T Consensus        92 ~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  171 (277)
T cd05607          92 LEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGKTITQRAGTNGYMAPEILKEEPY  171 (277)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEEcCCCCEEEeeceeeeecCCCceeeccCCCCCccCHHHHccCCC
Confidence            567888899999999999999999999999999999999999999999988654322  223467889999999988889


Q ss_pred             CchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCch
Q 026540           81 SFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSL  160 (237)
Q Consensus        81 ~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (237)
                      +.++|+||+|++++++++|..||.....     ............                                   
T Consensus       172 ~~~~DvwslGv~l~el~~g~~p~~~~~~-----~~~~~~~~~~~~-----------------------------------  211 (277)
T cd05607         172 SYPVDWFAMGCSIYEMVAGRTPFKDHKE-----KVAKEELKRRTL-----------------------------------  211 (277)
T ss_pred             CCchhHHHHHHHHHHHHhCCCCCCCCcc-----hhhHHHHHHHhh-----------------------------------
Confidence            9999999999999999999999865421     101000000000                                   


Q ss_pred             hHHhhhhcC-CCHHhHHHHHHHHHhccccCCCCCCCH----HHHhcCCCcCcccCCccc
Q 026540          161 DRLLVDKYR-FSETDAREFAEFLVPLLDFTPEKRPTA----QQCLQHPWLSLRNSTRDE  214 (237)
Q Consensus       161 ~~~~~~~~~-~~~~~~~~~~~li~~~L~~dP~~R~t~----~ell~hp~f~~~~~~~~~  214 (237)
                          ..... .....+.++.+++.+||+.||++||++    ++++.||||..++..+.+
T Consensus       212 ----~~~~~~~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~~~~h~~f~~~~~~~~~  266 (277)
T cd05607         212 ----EDEVKFEHQNFTEESKDICRLFLAKKPEDRLGSREKNDDPRKHEFFKTINFPRLE  266 (277)
T ss_pred             ----ccccccccccCCHHHHHHHHHHhccCHhhCCCCccchhhhhcChhhcCCCHHHHh
Confidence                00000 011346678999999999999999999    678899999987664443

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=99.96  E-value=2.8e-28  Score=201.66  Aligned_cols=194  Identities=23%  Similarity=0.355  Sum_probs=144.5

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcCcccCcCCCcccchHHhhh-cCCC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILR-AGYS   81 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~PE~~~~-~~~~   81 (237)
                      +++..+..++.|++.||+|+|..+++||||||+||+++.++.++++|||++...........++..|++||.+.+ ..++
T Consensus       117 l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  196 (345)
T cd07877         117 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYN  196 (345)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEcCCCCEEEecccccccccccccccccCCCccCHHHHhCccCCC
Confidence            578889999999999999999999999999999999999999999999998765544445567889999999876 3578


Q ss_pred             chhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCch--hhhcccCccchhccccCCc
Q 026540           82 FSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSK--DYFDRHGDLKRIRRLKFWS  159 (237)
Q Consensus        82 ~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~  159 (237)
                      .++|+||+|++++++++|..||...      .....+..+.+..+..+...........  .+....      .......
T Consensus       197 ~~~DvwslG~il~el~~g~~pf~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~  264 (345)
T cd07877         197 QTVDIWSVGCIMAELLTGRTLFPGT------DHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL------TQMPKMN  264 (345)
T ss_pred             chhhHHHHHHHHHHHHhCCCCCCCC------CHHHHHHHHHHHhCCCCHHHHhhcccHhHHHHHHHh------cccCCcc
Confidence            8999999999999999999999655      3455666667777766665543322210  010000      0000000


Q ss_pred             hhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccCCcccc
Q 026540          160 LDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNSTRDET  215 (237)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~~~~~~  215 (237)
                      ...       .....+..+.+||.+||+.||.+|+|+.+++.||||.....+..+.
T Consensus       265 ~~~-------~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~f~~~~~~~~~~  313 (345)
T cd07877         265 FAN-------VFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEP  313 (345)
T ss_pred             hhh-------hcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcChhhhhcCCCCccc
Confidence            000       0112356789999999999999999999999999999776544433

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.96  E-value=3.9e-29  Score=209.16  Aligned_cols=163  Identities=21%  Similarity=0.237  Sum_probs=124.1

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC-----------------------
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ-----------------------   59 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~-----------------------   59 (237)
                      +++..+..++.|++.||.|+|..+++||||||+|||++.++.++++|||++......                       
T Consensus        98 ~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  177 (377)
T cd05629          98 FSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHDSAYYQKLLQGKSNKNRIDNRN  177 (377)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEEeeccccccccccccccccccccccccccccccccc
Confidence            568889999999999999999999999999999999999999999999988422100                       


Q ss_pred             ---------------------------cccCcCCCcccchHHhhhcCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCC
Q 026540           60 ---------------------------FAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFC  112 (237)
Q Consensus        60 ---------------------------~~~~~~~~~~~~PE~~~~~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~  112 (237)
                                                 ....+|++.|+|||++.+..++.++|+||+||+++++++|..||....     
T Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~-----  252 (377)
T cd05629         178 SVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGAIMFECLIGWPPFCSEN-----  252 (377)
T ss_pred             ccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEecchhhhhhhcCCCCCCCCC-----
Confidence                                       002368899999999988889999999999999999999999997653     


Q ss_pred             ChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCC
Q 026540          113 EDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEK  192 (237)
Q Consensus       113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~  192 (237)
                       .......+......+                                      ........+.++.+||.+||. +|.+
T Consensus       253 -~~~~~~~i~~~~~~~--------------------------------------~~p~~~~~s~~~~dli~~lL~-~~~~  292 (377)
T cd05629         253 -SHETYRKIINWRETL--------------------------------------YFPDDIHLSVEAEDLIRRLIT-NAEN  292 (377)
T ss_pred             -HHHHHHHHHccCCcc--------------------------------------CCCCCCCCCHHHHHHHHHHhc-CHhh
Confidence             222222211100000                                      000011235678899999998 7777


Q ss_pred             C---CCHHHHhcCCCcCcccC
Q 026540          193 R---PTAQQCLQHPWLSLRNS  210 (237)
Q Consensus       193 R---~t~~ell~hp~f~~~~~  210 (237)
                      |   +|+.++++||||.+.++
T Consensus       293 r~~r~~~~~~l~hp~~~~~~~  313 (377)
T cd05629         293 RLGRGGAHEIKSHPFFRGVDW  313 (377)
T ss_pred             cCCCCCHHHHhcCCCcCCCCH
Confidence            6   59999999999997653

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=99.96  E-value=1.1e-28  Score=199.23  Aligned_cols=188  Identities=21%  Similarity=0.263  Sum_probs=135.2

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCc---CcccCcCCCcccchHHhhhc-
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK---QFAEEIQTRQYRAPEVILRA-   78 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~---~~~~~~~~~~~~~PE~~~~~-   78 (237)
                      +.+.++..++.|++.||.|+|..+++|+||||+||+++.++.++|+|||++.....   ......++..|++||.+.+. 
T Consensus       100 ~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  179 (291)
T cd07870         100 LHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLISYLGELKLADFGLARAKSIPSQTYSSEVVTLWYRPPDVLLGAT  179 (291)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEEcCCCcEEEeccccccccCCCCCCCCCccccccccCCceeecCC
Confidence            45678889999999999999999999999999999999999999999998854322   22233567889999998764 


Q ss_pred             CCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCC
Q 026540           79 GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFW  158 (237)
Q Consensus        79 ~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (237)
                      .++.++|+||+|++++++++|..||....     .....+.......+.+.............+........     ...
T Consensus       180 ~~~~~~Dv~slG~~l~~l~~g~~~f~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~  249 (291)
T cd07870         180 DYSSALDIWGAGCIFIEMLQGQPAFPGVS-----DVFEQLEKIWTVLGVPTEDTWPGVSKLPNYKPEWFLPC-----KPQ  249 (291)
T ss_pred             CCCcHHHHHHHHHHHHHHHhCCCCCCCch-----hHHHHHHHHHHHcCCCChhhhhhhhhcccccchhcccc-----CCc
Confidence            47889999999999999999999997653     34566666677777665554332222111111000000     000


Q ss_pred             chhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCc
Q 026540          159 SLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL  205 (237)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f  205 (237)
                      ... .....    ...+..+.+++.+||+.||++|||++|++.||||
T Consensus       250 ~~~-~~~~~----~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~h~~~  291 (291)
T cd07870         250 QLR-VVWKR----LSRPPKAEDLASQMLMMFPKDRISAQDALLHPYF  291 (291)
T ss_pred             chh-hhccc----cCCChHHHHHHHHHhCcCcccCcCHHHHhcCCCC
Confidence            000 00000    0124678899999999999999999999999998

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=99.96  E-value=1.9e-28  Score=201.66  Aligned_cols=190  Identities=23%  Similarity=0.366  Sum_probs=142.9

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC-------cccCcCCCcccchHH
Q 026540            2 TIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ-------FAEEIQTRQYRAPEV   74 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~-------~~~~~~~~~~~~PE~   74 (237)
                      ++++..+..++.|++.||.|+|..+++||||||+||+++.++.++|+|||++......       .....++..|++||.
T Consensus       101 ~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~g~~~y~aPE~  180 (332)
T cd07857         101 PLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVNADCELKICDFGLARGFSENPGENAGFMTEYVATRWYRAPEI  180 (332)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEEcCCCCEEeCcCCCceecccccccccccccCcccCccccCcHH
Confidence            3678899999999999999999999999999999999999999999999998643321       123467889999999


Q ss_pred             hhhc-CCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchh--hhcccCccch
Q 026540           75 ILRA-GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKD--YFDRHGDLKR  151 (237)
Q Consensus        75 ~~~~-~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~  151 (237)
                      +.+. .++.++|+||+|++++++++|..||...      .....+..+...+|.++............  +.......  
T Consensus       181 ~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  252 (332)
T cd07857         181 MLSFQSYTKAIDVWSVGCILAELLGRKPVFKGK------DYVDQLNQILQVLGTPDEETLSRIGSPKAQNYIRSLPNI--  252 (332)
T ss_pred             HhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCC------CHHHHHHHHHHHhCCCCHHHHHhhhhhhHHHHHHhcccc--
Confidence            8764 5889999999999999999999999765      36677888888888776654332211110  00000000  


Q ss_pred             hccccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccC
Q 026540          152 IRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNS  210 (237)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~  210 (237)
                          .......       .....+..+.+|+.+||+.||++|||+++++.||||..+..
T Consensus       253 ----~~~~~~~-------~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~~~~~~~~~  300 (332)
T cd07857         253 ----PKKPFES-------IFPNANPLALDLLEKLLAFDPTKRISVEEALEHPYLAIWHD  300 (332)
T ss_pred             ----CCcchHh-------hCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChhhhhhcC
Confidence                0000000       11123567899999999999999999999999999987764

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=99.96  E-value=2.4e-28  Score=197.55  Aligned_cols=186  Identities=26%  Similarity=0.378  Sum_probs=137.4

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC---cccCcCCCcccchHHhhhcC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ---FAEEIQTRQYRAPEVILRAG   79 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~~~~PE~~~~~~   79 (237)
                      +++.++..++.|++.||.|+|..++.|+||||+||+++.++.++|+|||++......   .....++..|++||.+.+..
T Consensus       103 l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~  182 (293)
T cd07843         103 FLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLLNNRGILKICDFGLAREYGSPLKPYTQLVVTLWYRAPELLLGAK  182 (293)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCcEEEeecCceeeccCCccccccccccccccCchhhcCCc
Confidence            678899999999999999999999999999999999999999999999988654432   23345678899999987654


Q ss_pred             -CCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCC
Q 026540           80 -YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFW  158 (237)
Q Consensus        80 -~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (237)
                       ++.++|+||+|++++++++|..||....      .......+....+.+....+............     ....   .
T Consensus       183 ~~~~~~Di~slG~~l~~l~~g~~~f~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~---~  248 (293)
T cd07843         183 EYSTAIDMWSVGCIFAELLTKKPLFPGKS------EIDQLNKIFKLLGTPTEKIWPGFSELPGAKKK-----TFTK---Y  248 (293)
T ss_pred             cccchhhHHHHHHHHHHHHhCCCCCCCCC------hHHHHHHHHHHhCCCchHHHHHhhccchhccc-----cccc---c
Confidence             6889999999999999999999997663      45566666666666555444322111111000     0000   0


Q ss_pred             chhHHhhhhcCCCHH-hHHHHHHHHHhccccCCCCCCCHHHHhcCCCc
Q 026540          159 SLDRLLVDKYRFSET-DAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL  205 (237)
Q Consensus       159 ~~~~~~~~~~~~~~~-~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f  205 (237)
                      .....   ...++.. .++.+.++|.+||+.+|++|||++|+++||||
T Consensus       249 ~~~~~---~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~~~f  293 (293)
T cd07843         249 PYNQL---RKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKHPYF  293 (293)
T ss_pred             cchhh---hccccccCCChHHHHHHHHHhccCccccCCHHHHhcCCCC
Confidence            00000   0111222 46778999999999999999999999999998

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=99.96  E-value=3.1e-28  Score=197.26  Aligned_cols=192  Identities=26%  Similarity=0.352  Sum_probs=141.0

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCc---CcccCcCCCcccchHHhhhc
Q 026540            2 TIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK---QFAEEIQTRQYRAPEVILRA   78 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~---~~~~~~~~~~~~~PE~~~~~   78 (237)
                      .+++.++..++.|+++||.|+|..++.|+||||+||+++.++.++|+|||++.....   ......++..|++||.+.+.
T Consensus        98 ~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  177 (298)
T cd07841          98 VLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLIASDGVLKLADFGLARSFGSPNRKMTHQVVTRWYRAPELLFGA  177 (298)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCeeecCCChhhEEEcCCCCEEEccceeeeeccCCCccccccccceeeeCHHHHhCC
Confidence            367889999999999999999999999999999999999999999999999865442   22333557789999998654


Q ss_pred             -CCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccC
Q 026540           79 -GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKF  157 (237)
Q Consensus        79 -~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (237)
                       .++.++|+||+|++++++++|..+|....      +...+..+.+..+.+....+........+...       .....
T Consensus       178 ~~~~~~~Dv~slG~il~e~~~g~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~  244 (298)
T cd07841         178 RHYGVGVDMWSVGCIFAELLLRVPFLPGDS------DIDQLGKIFEALGTPTEENWPGVTSLPDYVEF-------KPFPP  244 (298)
T ss_pred             CCCCcHHHHHHHHHHHHHHHcCCccccCCc------cHHHHHHHHHHcCCCchhhhhhcccccccccc-------cccCC
Confidence             47889999999999999999977776542      44555666666655544443322221111100       00000


Q ss_pred             CchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccCCcc
Q 026540          158 WSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNSTRD  213 (237)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~~~~  213 (237)
                      .+..       ......+..+.+|+.+||+.+|.+|||++|+++|+||........
T Consensus       245 ~~~~-------~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~~~~~~~~~~~~  293 (298)
T cd07841         245 TPLK-------QIFPAASDDALDLLQRLLTLNPNKRITARQALEHPYFSNDPAPTP  293 (298)
T ss_pred             cchh-------hhcccccHHHHHHHHHHhcCCcccCcCHHHHhhCccccCCCCCCC
Confidence            0111       112334678899999999999999999999999999998765543

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=99.96  E-value=3.7e-29  Score=208.09  Aligned_cols=162  Identities=19%  Similarity=0.244  Sum_probs=125.6

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC-----------------------
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ-----------------------   59 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~-----------------------   59 (237)
                      +++..+..++.|++.||+|+|..+++||||||+|||++.++.++|+|||++......                       
T Consensus        98 l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  177 (360)
T cd05627          98 LSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRTEFYRNLTHNPPSDFSFQNMN  177 (360)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEeeccCCcccccccccccccccccCCcccccccccc
Confidence            678899999999999999999999999999999999999999999999987532110                       


Q ss_pred             ---------------cccCcCCCcccchHHhhhcCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHH
Q 026540           60 ---------------FAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMEL  124 (237)
Q Consensus        60 ---------------~~~~~~~~~~~~PE~~~~~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~  124 (237)
                                     ....+|++.|+|||++.+..++.++|+||+||++++|++|..||...+      .......+...
T Consensus       178 ~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~Pf~~~~------~~~~~~~i~~~  251 (360)
T cd05627         178 SKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSET------PQETYRKVMNW  251 (360)
T ss_pred             cccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCCCCCCC------HHHHHHHHHcC
Confidence                           113468999999999998889999999999999999999999997653      21111111100


Q ss_pred             HCCCCHHHHhcCCCchhhhcccCccchhccccCCchhHHhhhhcCCC--HHhHHHHHHHHHhccccCCCCCC---CHHHH
Q 026540          125 IGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFS--ETDAREFAEFLVPLLDFTPEKRP---TAQQC  199 (237)
Q Consensus       125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~li~~~L~~dP~~R~---t~~el  199 (237)
                      ..                                        ...++  ...+..+.+||.+|+ .||.+|+   +++++
T Consensus       252 ~~----------------------------------------~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei  290 (360)
T cd05627         252 KE----------------------------------------TLVFPPEVPISEKAKDLILRFC-TDSENRIGSNGVEEI  290 (360)
T ss_pred             CC----------------------------------------ceecCCCCCCCHHHHHHHHHhc-cChhhcCCCCCHHHH
Confidence            00                                        00001  124677889999977 4999998   48999


Q ss_pred             hcCCCcCcccCC
Q 026540          200 LQHPWLSLRNST  211 (237)
Q Consensus       200 l~hp~f~~~~~~  211 (237)
                      ++||||.+.++.
T Consensus       291 ~~hp~f~~~~~~  302 (360)
T cd05627         291 KSHPFFEGVDWG  302 (360)
T ss_pred             hcCCCCCCCCHH
Confidence            999999987543

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=99.96  E-value=2.6e-28  Score=195.97  Aligned_cols=183  Identities=26%  Similarity=0.358  Sum_probs=135.4

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCc--CcccCcCCCcccchHHhhhc-C
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK--QFAEEIQTRQYRAPEVILRA-G   79 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~--~~~~~~~~~~~~~PE~~~~~-~   79 (237)
                      +++.++..++.|++.||.|+|..+++|+||||+||+++. +.++|+|||++.....  ......++..|++||.+... .
T Consensus        97 ~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  175 (282)
T cd07831          97 LPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIKD-DILKLADFGSCRGIYSKPPYTEYISTRWYRAPECLLTDGY  175 (282)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEcC-CCeEEEecccccccccCCCcCCCCCCcccCChhHhhcCCC
Confidence            578899999999999999999999999999999999999 9999999998865432  22334568899999987654 4


Q ss_pred             CCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCc
Q 026540           80 YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWS  159 (237)
Q Consensus        80 ~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (237)
                      ++.++|+||+|++++++++|..||.+.+      ..+....+....+..+..+..........     .. .........
T Consensus       176 ~~~~~Di~slGv~l~el~~~~~p~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~-~~~~~~~~~  243 (282)
T cd07831         176 YGPKMDIWAVGCVFFEILSLFPLFPGTN------ELDQIAKIHDVLGTPDAEVLKKFRKSRHM-----NY-NFPSKKGTG  243 (282)
T ss_pred             CCcchhHHHHHHHHHHHHcCCcCCCCCC------HHHHHHHHHHHcCCCCHHHHHhhcccccc-----cc-cCccccccc
Confidence            6889999999999999999999997653      45566666677776666552211110000     00 000000000


Q ss_pred             hhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCc
Q 026540          160 LDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL  205 (237)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f  205 (237)
                      ..       ......+..+.++|.+||+.+|++|||++++++||||
T Consensus       244 ~~-------~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~~~~  282 (282)
T cd07831         244 LR-------KLLPNASAEGLDLLKKLLAYDPDERITAKQALRHPYF  282 (282)
T ss_pred             HH-------HHcccccHHHHHHHHHHhccCcccccCHHHHhhCCCC
Confidence            00       0112347889999999999999999999999999998

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=99.96  E-value=1.3e-28  Score=198.21  Aligned_cols=186  Identities=27%  Similarity=0.397  Sum_probs=138.1

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC----cccCcCCCcccchHHhhhc
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ----FAEEIQTRQYRAPEVILRA   78 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~----~~~~~~~~~~~~PE~~~~~   78 (237)
                      +++.++..++.|++.+|.|+|..++.|+||||+||+++.++.++++|||.+......    .....++..|++||.+.+.
T Consensus        96 ~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  175 (286)
T cd07832          96 LPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLISADGVLKIADFGLARLFSEEEPRLYSHQVATRWYRAPELLYGA  175 (286)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCeecCCcCHHHEEEcCCCcEEEeeeeecccccCCCCCccccccCcccccCceeeecc
Confidence            678899999999999999999999999999999999999999999999988654322    3345678899999998755


Q ss_pred             C-CCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccC
Q 026540           79 G-YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKF  157 (237)
Q Consensus        79 ~-~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (237)
                      . ++.++|+||+|++++++++|..+|.+.      .+...+..+.+.++.+....+........+-...     ......
T Consensus       176 ~~~~~~~Di~slG~~l~~l~tg~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~  244 (286)
T cd07832         176 RKYDPGVDLWAVGCIFAELLNGSPLFPGE------NDIEQLAIVFRTLGTPNEETWPGLTSLPDYNKIT-----FPESKP  244 (286)
T ss_pred             ccCCchhHHHHHHHHHHHHHcCCcCcCCC------CHHHHHHHHHHHcCCCChHHHhhccCcchhhccc-----CCCCCc
Confidence            4 688999999999999999998777655      3556667777777666554443322211110000     000000


Q ss_pred             CchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcC
Q 026540          158 WSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLS  206 (237)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~  206 (237)
                      .+...       .....+..+.+|+.+||+.+|.+|||++++++||||.
T Consensus       245 ~~~~~-------~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h~~~~  286 (286)
T cd07832         245 IPLEE-------IFPDASPEALDLLKGLLVYDPSKRLSAAEALRHPYFT  286 (286)
T ss_pred             chHHH-------hCCCccHHHHHHHHHHhccChhhCCCHHHHhhCcCcC
Confidence            00000       1123357889999999999999999999999999995

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=99.96  E-value=6.2e-29  Score=213.70  Aligned_cols=158  Identities=25%  Similarity=0.227  Sum_probs=127.8

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC-----cccCcCCCcccchHHhhh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ-----FAEEIQTRQYRAPEVILR   77 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~-----~~~~~~~~~~~~PE~~~~   77 (237)
                      +++.++..++.|++.||+|+|..+++||||||+|||++.++.+||+|||++......     .....|++.|+|||++.+
T Consensus       166 l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  245 (478)
T PTZ00267        166 FQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVSLDVASSFCGTPYYLAPELWER  245 (478)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHHhEEECCCCcEEEEeCcCceecCCccccccccccCCCccccCHhHhCC
Confidence            678889999999999999999999999999999999999999999999998765432     223468999999999988


Q ss_pred             cCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccC
Q 026540           78 AGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKF  157 (237)
Q Consensus        78 ~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (237)
                      ..++.++|+||+||+++++++|..||....      ....+..+..  +.                              
T Consensus       246 ~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~------~~~~~~~~~~--~~------------------------------  287 (478)
T PTZ00267        246 KRYSKKADMWSLGVILYELLTLHRPFKGPS------QREIMQQVLY--GK------------------------------  287 (478)
T ss_pred             CCCCcHHhHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHh--CC------------------------------
Confidence            889999999999999999999999997542      1111111100  00                              


Q ss_pred             CchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCc
Q 026540          158 WSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSL  207 (237)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~  207 (237)
                               ....+..++.++.++|.+||..||++||++++++.|+|++.
T Consensus       288 ---------~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~~~~~~~  328 (478)
T PTZ00267        288 ---------YDPFPCPVSSGMKALLDPLLSKNPALRPTTQQLLHTEFLKY  328 (478)
T ss_pred             ---------CCCCCccCCHHHHHHHHHHhccChhhCcCHHHHHhCHHHHH
Confidence                     00112234678899999999999999999999999999864

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=99.96  E-value=1e-28  Score=206.88  Aligned_cols=164  Identities=21%  Similarity=0.195  Sum_probs=123.6

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCc------------------------
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK------------------------   58 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~------------------------   58 (237)
                      +++..++.++.|++.||.|+|..+++||||||+|||++.++.++|+|||++.....                        
T Consensus        98 ~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  177 (381)
T cd05626          98 FPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNSKYYQKGSHIRQDSMEPSDLW  177 (381)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHHEEECCCCCEEEeeCcCCcccccccccccccccccccccccCccccc
Confidence            56888999999999999999999999999999999999999999999998642110                        


Q ss_pred             --------------------------CcccCcCCCcccchHHhhhcCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCC
Q 026540           59 --------------------------QFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFC  112 (237)
Q Consensus        59 --------------------------~~~~~~~~~~~~~PE~~~~~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~  112 (237)
                                                .....+||+.|+|||++.+..++.++|+||+||+++++++|..||....     
T Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~-----  252 (381)
T cd05626         178 DDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVILFEMLVGQPPFLAPT-----  252 (381)
T ss_pred             ccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehhhHHHHHHhCCCCCcCCC-----
Confidence                                      0112468999999999988889999999999999999999999997653     


Q ss_pred             ChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCchhHHhhhhcCCCHHhHHHHHHHHHhcc--ccCC
Q 026540          113 EDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLL--DFTP  190 (237)
Q Consensus       113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L--~~dP  190 (237)
                       .......+......+                                      ........+.++.+||.+|+  ..+|
T Consensus       253 -~~~~~~~i~~~~~~~--------------------------------------~~~~~~~~s~~~~dli~~ll~~~~~~  293 (381)
T cd05626         253 -PTETQLKVINWENTL--------------------------------------HIPPQVKLSPEAVDLITKLCCSAEER  293 (381)
T ss_pred             -HHHHHHHHHcccccc--------------------------------------CCCCCCCCCHHHHHHHHHHccCcccc
Confidence             111111111000000                                      00011124678889999855  4455


Q ss_pred             CCCCCHHHHhcCCCcCcccC
Q 026540          191 EKRPTAQQCLQHPWLSLRNS  210 (237)
Q Consensus       191 ~~R~t~~ell~hp~f~~~~~  210 (237)
                      ..|++++++++||||....+
T Consensus       294 ~~R~~~~~~l~hp~f~~~~~  313 (381)
T cd05626         294 LGRNGADDIKAHPFFSEVDF  313 (381)
T ss_pred             cCCCCHHHHhcCcccCCCCh
Confidence            56999999999999987644

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=99.96  E-value=8e-29  Score=199.70  Aligned_cols=168  Identities=20%  Similarity=0.245  Sum_probs=132.2

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCc--CcccCcCCCcccchHHhhhcC
Q 026540            2 TIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK--QFAEEIQTRQYRAPEVILRAG   79 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~--~~~~~~~~~~~~~PE~~~~~~   79 (237)
                      ++++.+++.++.|++.||.|+|..+++||||||+||+++.++.++++|||++.....  ......++..|++||.+.+..
T Consensus        98 ~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~g~~~~~aPE~~~~~~  177 (285)
T cd05632          98 GFEEERALFYAAEILCGLEDLHRENTVYRDLKPENILLDDYGHIRISDLGLAVKIPEGESIRGRVGTVGYMAPEVLNNQR  177 (285)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEECCCCCEEEecCCcceecCCCCcccCCCCCcCccChHHhcCCC
Confidence            367889999999999999999999999999999999999999999999998865432  223457789999999998888


Q ss_pred             CCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCc
Q 026540           80 YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWS  159 (237)
Q Consensus        80 ~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (237)
                      ++.++|+||+|++++++++|..||....      +......+.+....                                
T Consensus       178 ~~~~~Di~slG~~l~~l~~g~~P~~~~~------~~~~~~~~~~~~~~--------------------------------  219 (285)
T cd05632         178 YTLSPDYWGLGCLIYEMIEGQSPFRGRK------EKVKREEVDRRVLE--------------------------------  219 (285)
T ss_pred             CCcccchHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHHhhhc--------------------------------
Confidence            9999999999999999999999997542      21111211111100                                


Q ss_pred             hhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCC-----HHHHhcCCCcCcccCCcc
Q 026540          160 LDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPT-----AQQCLQHPWLSLRNSTRD  213 (237)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t-----~~ell~hp~f~~~~~~~~  213 (237)
                            .....+...+..+.+|+.+||+.||++||+     +++++.|+||.....+..
T Consensus       220 ------~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~~~~~~  272 (285)
T cd05632         220 ------TEEVYSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRHPFFRNMNFKRL  272 (285)
T ss_pred             ------cccccCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHcChhhhcCCHHHH
Confidence                  000112234567889999999999999999     899999999998765543

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]

Probab=99.96  E-value=4.4e-29  Score=204.56  Aligned_cols=165  Identities=22%  Similarity=0.236  Sum_probs=142.3

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecC--cCcccCcCCCcccchHHhhhcCC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRAN--KQFAEEIQTRQYRAPEVILRAGY   80 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~--~~~~~~~~~~~~~~PE~~~~~~~   80 (237)
                      +.+..++-+++++++|+.|+|..||++|||||+|.+++.+|.+||.|||++....  .....++||+.|.|||++...+.
T Consensus       517 Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g~KTwTFcGTpEYVAPEIILnKGH  596 (732)
T KOG0614|consen  517 FDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSGRKTWTFCGTPEYVAPEIILNKGH  596 (732)
T ss_pred             cccchhhhhHHHHHHHHHHHHhcCceeccCChhheeeccCCceEEeehhhHHHhccCCceeeecCCcccccchhhhccCc
Confidence            4567788999999999999999999999999999999999999999999997654  34456799999999999999999


Q ss_pred             CchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCch
Q 026540           81 SFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSL  160 (237)
Q Consensus        81 ~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (237)
                      +.++|.||+|+++||+++|.+||.+..      +....+.+++.+                                   
T Consensus       597 D~avDyWaLGIli~ELL~G~pPFs~~d------pmktYn~ILkGi-----------------------------------  635 (732)
T KOG0614|consen  597 DRAVDYWALGILIYELLTGSPPFSGVD------PMKTYNLILKGI-----------------------------------  635 (732)
T ss_pred             chhhHHHHHHHHHHHHHcCCCCCCCCc------hHHHHHHHHhhh-----------------------------------
Confidence            999999999999999999999998873      555555554443                                   


Q ss_pred             hHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCC-----HHHHhcCCCcCcccCCcc
Q 026540          161 DRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPT-----AQQCLQHPWLSLRNSTRD  213 (237)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t-----~~ell~hp~f~~~~~~~~  213 (237)
                           +...+|..+.....+||+++...+|.+|+.     +.+|-+|.||.++++...
T Consensus       636 -----d~i~~Pr~I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH~Wf~gfdwegl  688 (732)
T KOG0614|consen  636 -----DKIEFPRRITKTATDLIKKLCRDNPTERLGYQKGGINDIKKHRWFEGFDWEGL  688 (732)
T ss_pred             -----hhhhcccccchhHHHHHHHHHhcCcHhhhccccCChHHHHhhhhhhcCChhhh
Confidence                 123456667788899999999999999986     889999999999988654

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=99.96  E-value=2.6e-28  Score=197.36  Aligned_cols=184  Identities=26%  Similarity=0.379  Sum_probs=134.3

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCC-CCcEEEeecCcceecCcC---cccCcCCCcccchHHhhhc
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGI-DMRCKVVDFGNACRANKQ---FAEEIQTRQYRAPEVILRA   78 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~-~~~~kl~dfg~~~~~~~~---~~~~~~~~~~~~PE~~~~~   78 (237)
                      +++..+..++.|++.||.|+|..+++|+||||+||+++. ++.++++|||++......   .....+++.|+|||.+.+.
T Consensus       107 ~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~~nil~~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~  186 (295)
T cd07837         107 LPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVDKQKGLLKIADLGLGRAFSIPVKSYTHEIVTLWYRAPEVLLGS  186 (295)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEecCCCeEEEeecccceecCCCccccCCcccccCCCChHHhhCC
Confidence            678899999999999999999999999999999999998 889999999988654322   2233557789999998764


Q ss_pred             -CCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccC
Q 026540           79 -GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKF  157 (237)
Q Consensus        79 -~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (237)
                       .++.++|+||+|++++++++|..||.+.+      +...+..+.+.++.+....+........+.. .         ..
T Consensus       187 ~~~~~~~Di~slG~~l~~l~~g~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---------~~  250 (295)
T cd07837         187 THYSTPVDIWSVGCIFAEMSRKQPLFPGDS------ELQQLLHIFKLLGTPTEQVWPGVSKLRDWHE-F---------PQ  250 (295)
T ss_pred             CCCCchHHHHHHHHHHHHHHcCCCCCCCCC------HHHHHHHHHHHhCCCChhhCcchhhccchhh-c---------Cc
Confidence             47889999999999999999999997653      4455555555555444433221111111100 0         00


Q ss_pred             CchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcC
Q 026540          158 WSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLS  206 (237)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~  206 (237)
                      +.....    .......+..+.+||.+||+.||.+||+++|++.||||.
T Consensus       251 ~~~~~~----~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~~~~~  295 (295)
T cd07837         251 WKPQDL----SRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTHPYFD  295 (295)
T ss_pred             ccchhH----HHhccccCHHHHHHHHHHccCChhhcCCHHHHhcCCCcC
Confidence            000000    001123567789999999999999999999999999985

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=99.96  E-value=1.4e-28  Score=202.55  Aligned_cols=192  Identities=25%  Similarity=0.388  Sum_probs=144.4

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC-------cccCcCCCcccchHHh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ-------FAEEIQTRQYRAPEVI   75 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~-------~~~~~~~~~~~~PE~~   75 (237)
                      +++..+..++.|++.||.|+|..+++|+||||+||+++.++.++|+|||++......       .....++..|++||.+
T Consensus       104 ~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~  183 (334)
T cd07855         104 LTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLVNEDCELRIGDFGMARGLSSSPTEHKYFMTEYVATRWYRAPELL  183 (334)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEecccccceeecccCcCCCcccccccccccccChHHh
Confidence            578899999999999999999999999999999999999999999999988643321       1234678889999998


Q ss_pred             hhc-CCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCch--hhhcccCccchh
Q 026540           76 LRA-GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSK--DYFDRHGDLKRI  152 (237)
Q Consensus        76 ~~~-~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~  152 (237)
                      .+. .++.++|+||+|++++++++|+.||.+..      ...++..+....|.++...........  .+....+     
T Consensus       184 ~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-----  252 (334)
T cd07855         184 LSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKN------YVHQLKLILSVLGSPSEEVLNRIGSDRVRKYIQNLP-----  252 (334)
T ss_pred             cCCcccccccchHHHHHHHHHHHcCCCccCCCC------hHHHHHHHHHHhCCChhHhhhhhchhhHHHHHhhcc-----
Confidence            764 57889999999999999999999997663      456677777778877766543222110  0111000     


Q ss_pred             ccccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccCCcc
Q 026540          153 RRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNSTRD  213 (237)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~~~~  213 (237)
                       .....+...       +....+..+.++|.+||+.+|.+|||+++++.||||.+......
T Consensus       253 -~~~~~~~~~-------~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~~~~~~~~~~  305 (334)
T cd07855         253 -RKQPVPWSK-------IFPKASPEALDLLSQMLQFDPEERITVEQALQHPFLAQYHDPDD  305 (334)
T ss_pred             -cCCCCCHHH-------HcccCCHHHHHHHHHHccCChhhCcCHHHHHhChhhhhccCCcc
Confidence             000001111       11234678999999999999999999999999999997765444

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=99.96  E-value=2.5e-28  Score=197.17  Aligned_cols=188  Identities=23%  Similarity=0.347  Sum_probs=136.2

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCc---CcccCcCCCcccchHHhhhc-
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK---QFAEEIQTRQYRAPEVILRA-   78 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~---~~~~~~~~~~~~~PE~~~~~-   78 (237)
                      +.+.++..++.|++.||.|+|..+++|+||||+||+++.++.++++|||++.....   ......++..|++||.+.+. 
T Consensus       100 ~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~  179 (291)
T cd07844         100 LSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLISERGELKLADFGLARAKSVPSKTYSNEVVTLWYRPPDVLLGST  179 (291)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCeecccCCHHHEEEcCCCCEEECccccccccCCCCccccccccccccCCcHHhhcCc
Confidence            56788999999999999999999999999999999999999999999998754321   12223457789999998764 


Q ss_pred             CCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCC
Q 026540           79 GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFW  158 (237)
Q Consensus        79 ~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (237)
                      .++.++|+||+|++++++++|..||....     ...+++..+.+.++.+....+........+.......     ....
T Consensus       180 ~~~~~~Dv~slG~il~~l~~g~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~  249 (291)
T cd07844         180 EYSTSLDMWGVGCIFYEMATGRPLFPGST-----DVEDQLHKIFRVLGTPTEETWPGVSSNPEFKPYSFPF-----YPPR  249 (291)
T ss_pred             ccCcHHHHHHHHHHHHHHHhCCCCCCCCc-----cHHHHHHHHHHhcCCCChhhhhhhhhccccccccccc-----cCCh
Confidence            57889999999999999999999996553     3556666777777766655543332221111110000     0000


Q ss_pred             chhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCc
Q 026540          159 SLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL  205 (237)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f  205 (237)
                      ++....   ...  .....+.+++.+||+.+|.+|||+.++++||||
T Consensus       250 ~~~~~~---~~~--~~~~~~~~li~~~L~~~p~~Rps~~e~l~~~~f  291 (291)
T cd07844         250 PLINHA---PRL--DRIPHGEELALKFLQYEPKKRISAAEAMKHPYF  291 (291)
T ss_pred             hHHHhC---cCC--CCchhHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence            000000   001  112677899999999999999999999999998

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=99.96  E-value=2.6e-28  Score=201.29  Aligned_cols=193  Identities=25%  Similarity=0.340  Sum_probs=142.0

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC---cccCcCCCcccchHHhhh-c
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ---FAEEIQTRQYRAPEVILR-A   78 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~~~~PE~~~~-~   78 (237)
                      +++..+..++.|++.||.|+|..+++|+||||+||+++.++.++|+|||++......   .....++..|++||.+.. .
T Consensus       105 l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  184 (337)
T cd07858         105 LSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSEKGDFMTEYVVTRWYRAPELLLNCS  184 (337)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECcCccccccCCCcccccccccccCccChHHHhcCC
Confidence            578899999999999999999999999999999999999999999999998654322   223456788999999876 3


Q ss_pred             CCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCC--chhhhcccCccchhcccc
Q 026540           79 GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQ--SKDYFDRHGDLKRIRRLK  156 (237)
Q Consensus        79 ~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~  156 (237)
                      .++.++|+||+|++++++++|+.||.+..      .......+.+..+.++.........  ...+...      .....
T Consensus       185 ~~~~~~DiwslG~il~~l~~g~~pf~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~  252 (337)
T cd07858         185 EYTTAIDVWSVGCIFAELLGRKPLFPGKD------YVHQLKLITELLGSPSEEDLGFIRNEKARRYIRS------LPYTP  252 (337)
T ss_pred             CCCCcccHHHHHHHHHHHHcCCCCCCCCC------hHHHHHHHHHHhCCCChHHhhhcCchhhhHHHHh------cCccc
Confidence            58899999999999999999999997652      4455666677777665544321111  0001000      00000


Q ss_pred             CCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccCCccc
Q 026540          157 FWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNSTRDE  214 (237)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~~~~~  214 (237)
                      .....       .....++..+.+|+.+||+.+|++|||++++++||||.........
T Consensus       253 ~~~~~-------~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~~~~~~~  303 (337)
T cd07858         253 RQSFA-------RLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASLHDPSDE  303 (337)
T ss_pred             ccCHH-------HHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhhcCcccC
Confidence            00000       0122356788999999999999999999999999999977554443

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=99.96  E-value=2.5e-28  Score=201.87  Aligned_cols=192  Identities=24%  Similarity=0.339  Sum_probs=142.3

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcCcccCcCCCcccchHHhhhc-CCC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRA-GYS   81 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~PE~~~~~-~~~   81 (237)
                      +++..+..++.|++.||.|+|..++.|+||||+||+++.++.++++|||.+...........+++.|++||.+.+. .++
T Consensus       115 l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  194 (343)
T cd07880         115 LSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQTDSEMTGYVVTRWYRAPEVILNWMHYT  194 (343)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccccccccCccccccCCcccCHHHHhCCCCCC
Confidence            5688899999999999999999999999999999999999999999999987665555555678899999999764 578


Q ss_pred             chhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCch--hhhcccCccchhccccCCc
Q 026540           82 FSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSK--DYFDRHGDLKRIRRLKFWS  159 (237)
Q Consensus        82 ~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~  159 (237)
                      .++|+||+|++++++++|..||.+..      .......+....+..+..+........  .+....         ....
T Consensus       195 ~~~Di~slG~ll~~l~~g~~pf~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~  259 (343)
T cd07880         195 QTVDIWSVGCIMAEMLTGKPLFKGHD------HLDQLMEIMKVTGTPSKEFVQKLQSEDAKNYVKKL---------PRFR  259 (343)
T ss_pred             cHHHHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHHhcCCCCHHHHHhhcchhHHHHHHhc---------cccC
Confidence            89999999999999999999997653      444555555555555554432221110  000000         0000


Q ss_pred             hhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccCCcc
Q 026540          160 LDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNSTRD  213 (237)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~~~~  213 (237)
                      ....    .......+..+.++|.+||+.||.+|||+.+++.||||........
T Consensus       260 ~~~~----~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~~~~~~~~~~~~  309 (343)
T cd07880         260 KKDF----RSLLPNANPLAVNVLEKMLVLDAESRITAAEALAHPYFEEFHDPED  309 (343)
T ss_pred             cchH----HHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcCccHhhhcCccc
Confidence            0000    0112234667899999999999999999999999999998765443

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=99.96  E-value=7.5e-29  Score=199.30  Aligned_cols=163  Identities=23%  Similarity=0.319  Sum_probs=128.2

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCc-CcccCcCCCcccchHHhhh-cCC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK-QFAEEIQTRQYRAPEVILR-AGY   80 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~-~~~~~~~~~~~~~PE~~~~-~~~   80 (237)
                      +++.++..++.|++.||.|+|+.+++|+||||+||+++.++.++++|||++..... ......++..|++||.+.. ..+
T Consensus        94 l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  173 (279)
T cd05633          94 FSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGTAY  173 (279)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEECCCCCEEEccCCcceeccccCccCcCCCcCccCHHHhcCCCCC
Confidence            57889999999999999999999999999999999999999999999999865432 2223467899999999874 457


Q ss_pred             CchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCch
Q 026540           81 SFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSL  160 (237)
Q Consensus        81 ~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (237)
                      +.++|+||+|++++++++|..||......    ....+...   .                                   
T Consensus       174 ~~~~Di~slG~~l~~l~~g~~pf~~~~~~----~~~~~~~~---~-----------------------------------  211 (279)
T cd05633         174 DSSADWFSLGCMLFKLLRGHSPFRQHKTK----DKHEIDRM---T-----------------------------------  211 (279)
T ss_pred             CchhhhHHHHHHHHHHHhCCCCcCCCCCc----CHHHHHHH---h-----------------------------------
Confidence            89999999999999999999999654211    00001000   0                                   


Q ss_pred             hHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCC-----CHHHHhcCCCcCcccC
Q 026540          161 DRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRP-----TAQQCLQHPWLSLRNS  210 (237)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~-----t~~ell~hp~f~~~~~  210 (237)
                         .......+...+..+.++|.+||+.||++|+     |++++++||||++.+.
T Consensus       212 ---~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h~~~~~~~~  263 (279)
T cd05633         212 ---LTVNVELPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEHVFFKGIDW  263 (279)
T ss_pred             ---hcCCcCCccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhCccccCCCH
Confidence               0001123344577899999999999999999     6999999999998764

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]

Probab=99.96  E-value=7.7e-29  Score=204.29  Aligned_cols=152  Identities=22%  Similarity=0.215  Sum_probs=125.3

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcCcc----cCcCCCcccchHHhhhc
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQFA----EEIQTRQYRAPEVILRA   78 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~~~----~~~~~~~~~~PE~~~~~   78 (237)
                      ++-.+.+.++.||++|++||.+++++||||-..||||+.+..+||+|||+++.......    ....+..|.|||.+..+
T Consensus       300 l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~~~~~~kfPIkWtAPEa~~~~  379 (468)
T KOG0197|consen  300 LNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILVDEDLVVKISDFGLARLIGDDEYTASEGGKFPIKWTAPEALNYG  379 (468)
T ss_pred             cchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheeeccCceEEEcccccccccCCCceeecCCCCCCceecCHHHHhhC
Confidence            55678899999999999999999999999999999999999999999999985443322    22336789999999999


Q ss_pred             CCCchhhhhhhhhHHHHHhc-CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccC
Q 026540           79 GYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKF  157 (237)
Q Consensus        79 ~~~~~~diws~g~~l~~~~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (237)
                      .++.++||||||++++|+++ |+.|+...+      ..+.++.+.+..                                
T Consensus       380 ~FS~kSDVWSFGVlL~E~fT~G~~py~~ms------n~ev~~~le~Gy--------------------------------  421 (468)
T KOG0197|consen  380 KFSSKSDVWSFGVLLWELFTYGRVPYPGMS------NEEVLELLERGY--------------------------------  421 (468)
T ss_pred             CcccccceeehhhhHHHHhccCCCCCCCCC------HHHHHHHHhccC--------------------------------
Confidence            99999999999999999997 778887764      333333332211                                


Q ss_pred             CchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhc
Q 026540          158 WSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ  201 (237)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  201 (237)
                               +...|..|++.+.+++..|++.+|++|||++.+..
T Consensus       422 ---------Rlp~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~~  456 (468)
T KOG0197|consen  422 ---------RLPRPEGCPDEVYELMKSCWHEDPEDRPTFETLRE  456 (468)
T ss_pred             ---------cCCCCCCCCHHHHHHHHHHhhCCcccCCCHHHHHH
Confidence                     23457789999999999999999999999996653

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=99.96  E-value=8.1e-29  Score=203.94  Aligned_cols=200  Identities=20%  Similarity=0.269  Sum_probs=129.0

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhh-cCCccCCCCCccccCCCCcEEEeecCcceecCc-CcccCcCCCcccchHHhhhcCC
Q 026540            3 IVEKKLKRRAKRAVANISIRRAS-MGGIELPKPERCLDGIDMRCKVVDFGNACRANK-QFAEEIQTRQYRAPEVILRAGY   80 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~-~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~-~~~~~~~~~~~~~PE~~~~~~~   80 (237)
                      ++++.+..++.+++.+|.|+|.. +++|+||||+||+++.++.++|+|||++..... ......++..|+|||.+.+..+
T Consensus       100 ~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  179 (333)
T cd06650         100 IPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHY  179 (333)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEcCCCCEEEeeCCcchhhhhhccccCCCCccccCHHHhcCCCC
Confidence            56778889999999999999985 689999999999999999999999998864432 2234467889999999988889


Q ss_pred             CchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHH--HHCCCCHHHHhcCCCchh-hhcccCccchhccccC
Q 026540           81 SFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMME--LIGKMPRKIAIGGAQSKD-YFDRHGDLKRIRRLKF  157 (237)
Q Consensus        81 ~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  157 (237)
                      +.++|+||+||+++++++|..||....      . ..+..+..  ..+............... ...... .........
T Consensus       180 ~~~~DvwslG~il~~l~~g~~p~~~~~------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~  251 (333)
T cd06650         180 SVQSDIWSMGLSLVEMAIGRYPIPPPD------A-KELELMFGCPVEGDPAESETSPRPRPPGRPLSSYG-PDSRPPMAI  251 (333)
T ss_pred             CcHHHHHHHHHHHHHHHHCCCCCCCcc------h-hHHHHHhcCcccCCccccccCcccCCccchhhhhc-ccccccccH
Confidence            999999999999999999999997542      1 11111111  001111000000000000 000000 000000000


Q ss_pred             CchhH-Hhhhh-cCC-CHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccC
Q 026540          158 WSLDR-LLVDK-YRF-SETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNS  210 (237)
Q Consensus       158 ~~~~~-~~~~~-~~~-~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~  210 (237)
                      ..... ..... ... ....+.++.+|+.+||+.||++|||++|+++||||+....
T Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~h~~~~~~~~  307 (333)
T cd06650         252 FELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSEA  307 (333)
T ss_pred             HHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhhCHHHhcCcc
Confidence            00000 00000 000 1124678999999999999999999999999999986543

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=99.95  E-value=5.9e-29  Score=208.00  Aligned_cols=163  Identities=21%  Similarity=0.228  Sum_probs=124.1

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCc------------------------
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK------------------------   58 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~------------------------   58 (237)
                      +++..+..++.|++.||.|+|..+++||||||+|||++.++.++|+|||++.....                        
T Consensus        98 ~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  177 (376)
T cd05598          98 FEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQKGDHHRQDSMEPSEEW  177 (376)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHEEECCCCCEEEEeCCCCccccccccccccccccccccccccccccc
Confidence            56888899999999999999999999999999999999999999999998632100                        


Q ss_pred             ----------------------CcccCcCCCcccchHHhhhcCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHH
Q 026540           59 ----------------------QFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDED  116 (237)
Q Consensus        59 ----------------------~~~~~~~~~~~~~PE~~~~~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~  116 (237)
                                            .....+|++.|+|||++.+..++.++|+||+||+++++++|..||.+..      ...
T Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~------~~~  251 (376)
T cd05598         178 SEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQPPFLADT------PAE  251 (376)
T ss_pred             cccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceeeehhhCCCCCCCCC------HHH
Confidence                                  0012368899999999998889999999999999999999999997653      111


Q ss_pred             HHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCC--
Q 026540          117 HLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRP--  194 (237)
Q Consensus       117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~--  194 (237)
                      ....+.......                                      .......++..+.++|.+|+ .+|.+|+  
T Consensus       252 ~~~~i~~~~~~~--------------------------------------~~~~~~~~s~~~~~li~~l~-~~p~~R~~~  292 (376)
T cd05598         252 TQLKVINWETTL--------------------------------------HIPSQAKLSREASDLILRLC-CGAEDRLGK  292 (376)
T ss_pred             HHHHHhccCccc--------------------------------------cCCCCCCCCHHHHHHHHHHh-cCHhhcCCC
Confidence            111110000000                                      00011234667889999876 5999999  


Q ss_pred             -CHHHHhcCCCcCcccC
Q 026540          195 -TAQQCLQHPWLSLRNS  210 (237)
Q Consensus       195 -t~~ell~hp~f~~~~~  210 (237)
                       |+.++++||||.+.+.
T Consensus       293 ~t~~ell~h~~~~~~~~  309 (376)
T cd05598         293 NGADEIKAHPFFKGIDF  309 (376)
T ss_pred             CCHHHHhCCCCcCCCCH
Confidence             9999999999997643

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=99.95  E-value=3.1e-28  Score=195.81  Aligned_cols=185  Identities=25%  Similarity=0.344  Sum_probs=137.6

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC---cccCcCCCcccchHHhhhc
Q 026540            2 TIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ---FAEEIQTRQYRAPEVILRA   78 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~~~~PE~~~~~   78 (237)
                      .+++..+..++.|++.+|.|+|..++.|+|++|+||+++.++.++++|||++......   .....++..|++||.+.+.
T Consensus        95 ~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~  174 (283)
T cd07835          95 GLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLIDREGALKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGS  174 (283)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCcEEEeecccccccCCCccccCccccccCCCCCceeecC
Confidence            3678899999999999999999999999999999999999999999999998654322   2233557789999988765


Q ss_pred             -CCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccC
Q 026540           79 -GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKF  157 (237)
Q Consensus        79 -~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (237)
                       .++.++|+||+|++++++++|..||...+      +...+..+.+..+.+....+........+.........      
T Consensus       175 ~~~~~~~Di~slG~~l~~l~~g~~pf~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------  242 (283)
T cd07835         175 RQYSTPVDIWSIGCIFAEMVNRRPLFPGDS------EIDQLFRIFRTLGTPDEDVWPGVTSLPDYKPTFPKWAR------  242 (283)
T ss_pred             cccCcHHHHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHHHhCCCChHHhhhhhhchhhhhhcccccc------
Confidence             46889999999999999999999997653      45555566666666655544332222222111111000      


Q ss_pred             CchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCc
Q 026540          158 WSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL  205 (237)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f  205 (237)
                      ...       .......+..+.+++.+||+.+|.+|||++|+++||||
T Consensus       243 ~~~-------~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~  283 (283)
T cd07835         243 QDL-------SKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQHPYF  283 (283)
T ss_pred             cch-------hhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcCCCC
Confidence            000       01122345778899999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=99.95  E-value=3.6e-28  Score=211.56  Aligned_cols=179  Identities=14%  Similarity=0.103  Sum_probs=119.0

Q ss_pred             HHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCC-CCcEEEeecCcceecCc----CcccCcCCCcccchHHhhhcC
Q 026540            5 EKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGI-DMRCKVVDFGNACRANK----QFAEEIQTRQYRAPEVILRAG   79 (237)
Q Consensus         5 ~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~-~~~~kl~dfg~~~~~~~----~~~~~~~~~~~~~PE~~~~~~   79 (237)
                      +..+..++.|++.||+|+|..+++||||||+|||++. ++.+||+|||++.....    ......+++.|++||.+....
T Consensus       254 ~~~i~~i~~qll~aL~yLH~~gIiHRDLKP~NILl~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~  333 (566)
T PLN03225        254 NKIIQTIMRQILFALDGLHSTGIVHRDVKPQNIIFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMST  333 (566)
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCEEeCcCCHHHEEEeCCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccC
Confidence            4456789999999999999999999999999999986 57999999999864432    223457788999999765332


Q ss_pred             ----------------------CCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCC
Q 026540           80 ----------------------YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGA  137 (237)
Q Consensus        80 ----------------------~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  137 (237)
                                            ++.++|+||+||++++|+++..++.        .+...+.......+.....+.....
T Consensus       334 ~~~~~~~~~~~~~~sp~l~~~~~~~k~DVwSlGviL~el~~~~~~~~--------~~~~~~~~~l~~~~~~~~~~~~~~~  405 (566)
T PLN03225        334 QTPSAPSAPVATALSPVLWQLNLPDRFDIYSAGLIFLQMAFPNLRSD--------SNLIQFNRQLKRNDYDLVAWRKLVE  405 (566)
T ss_pred             CCCCCccccccccccchhccccCCCCcccHHHHHHHHHHHhCcCCCc--------hHHHHHHHHHHhcCCcHHHHHHhhc
Confidence                                  2345699999999999998655432        1222332222222221111110000


Q ss_pred             CchhhhcccCccchhccccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccCC
Q 026540          138 QSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNST  211 (237)
Q Consensus       138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~~  211 (237)
                      .                 .   ............+.......+||.+||+.||++|||++|+|+||||......
T Consensus       406 ~-----------------~---~~~~~~~~~~~~d~~~~~~~dLi~~mL~~dP~kR~ta~e~L~Hpff~~~~~~  459 (566)
T PLN03225        406 P-----------------R---ASPDLRRGFEVLDLDGGAGWELLKSMMRFKGRQRISAKAALAHPYFDREGLL  459 (566)
T ss_pred             c-----------------c---cchhhhhhhhhccccchHHHHHHHHHccCCcccCCCHHHHhCCcCcCCCCcc
Confidence            0                 0   0000000011112223456799999999999999999999999999976554

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=99.95  E-value=3.7e-28  Score=196.52  Aligned_cols=189  Identities=25%  Similarity=0.328  Sum_probs=138.1

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCC-CCcEEEeecCcceecCc---CcccCcCCCcccchHHhhhc
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGI-DMRCKVVDFGNACRANK---QFAEEIQTRQYRAPEVILRA   78 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~-~~~~kl~dfg~~~~~~~---~~~~~~~~~~~~~PE~~~~~   78 (237)
                      +++..+..++.|++.||+|+|..++.|+||+|+||+++. ++.+|++|||++.....   ......++..|++||.+.+.
T Consensus        99 ~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~  178 (294)
T PLN00009         99 KNPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGS  178 (294)
T ss_pred             cCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCcceEEEECCCCEEEEcccccccccCCCccccccCceeecccCHHHHhCC
Confidence            457788899999999999999999999999999999985 56799999998864432   22334567889999998764


Q ss_pred             -CCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccC
Q 026540           79 -GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKF  157 (237)
Q Consensus        79 -~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (237)
                       .++.++|+||+|++++++++|..||....      .......+....+.+....+........+......         
T Consensus       179 ~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------  243 (294)
T PLN00009        179 RHYSTPVDIWSVGCIFAEMVNQKPLFPGDS------EIDELFKIFRILGTPNEETWPGVTSLPDYKSAFPK---------  243 (294)
T ss_pred             CCCCcHHHHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHHHhCCCChhhccccccchhhhhhccc---------
Confidence             47889999999999999999999997653      44555556666666655554332222222111100         


Q ss_pred             CchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccC
Q 026540          158 WSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNS  210 (237)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~  210 (237)
                      +.....    .......+..+.+++.+||+.+|++||+++++++||||..+..
T Consensus       244 ~~~~~~----~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~~~~~~~~~  292 (294)
T PLN00009        244 WPPKDL----ATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEHEYFKDLGD  292 (294)
T ss_pred             CCCCCH----HHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcCchHhHHhc
Confidence            000000    0012234677899999999999999999999999999997754

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=99.95  E-value=7.3e-28  Score=193.76  Aligned_cols=187  Identities=24%  Similarity=0.329  Sum_probs=134.3

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC---cccCcCCCcccchHHhhhc
Q 026540            2 TIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ---FAEEIQTRQYRAPEVILRA   78 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~~~~PE~~~~~   78 (237)
                      .+++.++..++.|++.+|.|+|..++.|+||||+||+++.++.++|+|||++......   .....++..|++||.+.+.
T Consensus        96 ~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~  175 (286)
T cd07847          96 GVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILITKQGQIKLCDFGFARILTGPGDDYTDYVATRWYRAPELLVGD  175 (286)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCceecCCChhhEEEcCCCcEEECccccceecCCCcccccCcccccccCCHHHHhCC
Confidence            3678899999999999999999999999999999999999999999999998654322   2234567889999998764


Q ss_pred             -CCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccC
Q 026540           79 -GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKF  157 (237)
Q Consensus        79 -~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (237)
                       .++.++|+||+|++++++++|..||.+..      ..+.+..+....+........... ...++......   .....
T Consensus       176 ~~~~~~~Di~slG~i~~~l~~g~~p~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~---~~~~~  245 (286)
T cd07847         176 TQYGPPVDVWAIGCVFAELLTGQPLWPGKS------DVDQLYLIRKTLGDLIPRHQQIFS-TNQFFKGLSIP---EPETR  245 (286)
T ss_pred             CCcCchhhhHHHHHHHHHHHhCCCCCCCCC------hHHHHHHHHHHhCCCChHHhhhcc-cccccccccCC---Ccccc
Confidence             57889999999999999999999997653      445555555555544332211110 00111000000   00000


Q ss_pred             CchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCc
Q 026540          158 WSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL  205 (237)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f  205 (237)
                      .+...       .....+..+.+|+.+||+.+|++|||+.|++.||||
T Consensus       246 ~~~~~-------~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~~~f  286 (286)
T cd07847         246 EPLES-------KFPNISSPALSFLKGCLQMDPTERLSCEELLEHPYF  286 (286)
T ss_pred             cCHHH-------HhccCCHHHHHHHHHHhcCCccccCCHHHHhcCCCC
Confidence            00000       011236788999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]

Probab=99.95  E-value=9e-30  Score=197.07  Aligned_cols=163  Identities=23%  Similarity=0.294  Sum_probs=135.0

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCc---CcccCcCCCcccchHHhhhc
Q 026540            2 TIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK---QFAEEIQTRQYRAPEVILRA   78 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~---~~~~~~~~~~~~~PE~~~~~   78 (237)
                      +|+|+++..+++..|.||.|+|...-+|||||..|||++.+|..||+|||.+..+..   .....+||+.|++||++..-
T Consensus       125 ~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVI~EI  204 (502)
T KOG0574|consen  125 PLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIEEI  204 (502)
T ss_pred             CccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEEcccchhhhhhccccchhhhhHHhhCccccCcccccHHHHHHh
Confidence            578999999999999999999999999999999999999999999999999866553   24567999999999999999


Q ss_pred             CCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCC
Q 026540           79 GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFW  158 (237)
Q Consensus        79 ~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (237)
                      +|...+|+||+|+.-.+|..|++||.+.-         .+..++-+-..+                              
T Consensus       205 GY~~~ADIWSLGITaIEMAEG~PPYsDIH---------PMRAIFMIPT~P------------------------------  245 (502)
T KOG0574|consen  205 GYDTKADIWSLGITAIEMAEGRPPYSDIH---------PMRAIFMIPTKP------------------------------  245 (502)
T ss_pred             ccchhhhHhhhcchhhhhhcCCCCccccc---------ccceeEeccCCC------------------------------
Confidence            99999999999999999999999996541         111111111111                              


Q ss_pred             chhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCccc
Q 026540          159 SLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRN  209 (237)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~  209 (237)
                            +.....+..-+.+|.||+++||..+|++|-|+.++++|||++.-.
T Consensus       246 ------PPTF~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H~FiknA~  290 (502)
T KOG0574|consen  246 ------PPTFKKPEEWSSEFNDFIRSCLIKKPEERKTALRLCEHTFIKNAP  290 (502)
T ss_pred             ------CCCCCChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhhhhhhcCCC
Confidence                  112233555578999999999999999999999999999998543

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=99.95  E-value=6.3e-28  Score=196.92  Aligned_cols=194  Identities=19%  Similarity=0.199  Sum_probs=130.5

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC----------cccCcCCCcccc
Q 026540            2 TIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ----------FAEEIQTRQYRA   71 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~----------~~~~~~~~~~~~   71 (237)
                      ++.+..+..++.|++.||.|+|..+++|+||||+||+++.++.++++||+.+......          .....++..|++
T Consensus        97 ~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~a  176 (314)
T cd08216          97 GLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVVHDFPKSSVKNLPWLS  176 (314)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEecCCceEEecCccceeeccccccccccccccccccccccccC
Confidence            3578889999999999999999999999999999999999999999999987543211          122345678999


Q ss_pred             hHHhhhc--CCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCcc
Q 026540           72 PEVILRA--GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDL  149 (237)
Q Consensus        72 PE~~~~~--~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (237)
                      ||.+...  .++.++|+||+|++++++++|..||....      ...  .......+..+........ ..    .....
T Consensus       177 PE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~------~~~--~~~~~~~~~~~~~~~~~~~-~~----~~~~~  243 (314)
T cd08216         177 PEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMP------ATQ--MLLEKVRGTVPCLLDKSTY-PL----YEDSM  243 (314)
T ss_pred             HHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCC------HHH--HHHHHHhccCccccccCch-hh----hcCCc
Confidence            9999764  57889999999999999999999997542      111  1111222222211100000 00    00000


Q ss_pred             chhccccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCccc
Q 026540          150 KRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRN  209 (237)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~  209 (237)
                      .... ....................+..+.+|+.+||++||++|||++|+++||||+...
T Consensus       244 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~p~~~~~~  302 (314)
T cd08216         244 SQSR-SSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNHSFFKQCK  302 (314)
T ss_pred             Cccc-ccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcCchHhhhc
Confidence            0000 0000000001111223445577899999999999999999999999999999775

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=99.95  E-value=7.2e-28  Score=194.01  Aligned_cols=187  Identities=25%  Similarity=0.341  Sum_probs=140.0

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCc----CcccCcCCCcccchHHhhhc
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK----QFAEEIQTRQYRAPEVILRA   78 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~----~~~~~~~~~~~~~PE~~~~~   78 (237)
                      +++.++..++.+++.+|.|+|..++.|+|++|+||+++.++.++|+|||.+.....    ......++..|++||++.+.
T Consensus        97 ~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~  176 (288)
T cd07833          97 LPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILVSESGVLKLCDFGFARALRARPASPLTDYVATRWYRAPELLVGD  176 (288)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEEeeecccccCCCccccccCcccccCCcCCchhcCC
Confidence            56889999999999999999999999999999999999999999999998865432    22344667889999999888


Q ss_pred             -CCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccC
Q 026540           79 -GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKF  157 (237)
Q Consensus        79 -~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (237)
                       .++.++|+||+|++++++++|..||...      ...+.+..+....+..++...........+...       . ...
T Consensus       177 ~~~~~~~Dv~slG~~l~~l~~g~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~-~~~  242 (288)
T cd07833         177 TNYGKPVDVWAIGCIMAELLDGEPLFPGD------SDIDQLYLIQKCLGPLPPSHQELFSSNPRFAGV-------A-FPE  242 (288)
T ss_pred             CCcCchhhHHHHHHHHHHHHhCCCCCCCC------CHHHHHHHHHHHhCCCCHHHhhhcccCcccccc-------c-cCC
Confidence             7889999999999999999999998765      345666666777777666544322211111000       0 000


Q ss_pred             CchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCc
Q 026540          158 WSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL  205 (237)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f  205 (237)
                      .......  ....+..++.++.+|+.+||..+|.+|||++++++||||
T Consensus       243 ~~~~~~~--~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~f  288 (288)
T cd07833         243 PSQPESL--ERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQHPYF  288 (288)
T ss_pred             CCCcHHH--HHhcCCccchHHHHHHHHHhccCchhcccHHHHhcCCCC
Confidence            0000000  111233457889999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=99.95  E-value=1.7e-28  Score=201.50  Aligned_cols=199  Identities=17%  Similarity=0.190  Sum_probs=126.6

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCc----------CcccCcCCCcccch
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK----------QFAEEIQTRQYRAP   72 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~----------~~~~~~~~~~~~~P   72 (237)
                      +++..+..++.|++.||.|+|..+++||||||+||+++.++.++++||+.......          ......++..|++|
T Consensus        98 l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aP  177 (327)
T cd08227          98 MSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRLRVVHDFPKYSVKVLPWLSP  177 (327)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhhEEEecCCcEEEcccchhhccccccccccccccccccccceecccCh
Confidence            67889999999999999999999999999999999999999999999975432110          01122456779999


Q ss_pred             HHhhhc--CCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhc------
Q 026540           73 EVILRA--GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFD------  144 (237)
Q Consensus        73 E~~~~~--~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------  144 (237)
                      |++.+.  .++.++|+||+||+++++++|..||....      ...  .......+..+...............      
T Consensus       178 E~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~------~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (327)
T cd08227         178 EVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMP------ATQ--MLLEKLNGTVPCLLDTTTIPAEELTMKPSRSG  249 (327)
T ss_pred             HHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcc------hhH--HHHHHhcCCccccccccchhhhhcccCCcccC
Confidence            999863  58899999999999999999999997542      111  11111112222111000000000000      


Q ss_pred             ccCccchhccccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCccc
Q 026540          145 RHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRN  209 (237)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~  209 (237)
                      ..............................++.+.+|+.+||++||++|||++|+++||||....
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~p~f~~~~  314 (327)
T cd08227         250 ANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQIK  314 (327)
T ss_pred             CcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcChhhhhcc
Confidence            00000000000000000000000112334567899999999999999999999999999998643

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=99.95  E-value=7.1e-28  Score=190.97  Aligned_cols=156  Identities=22%  Similarity=0.333  Sum_probs=124.8

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCc---CcccCcCCCcccchHHhhhcC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK---QFAEEIQTRQYRAPEVILRAG   79 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~---~~~~~~~~~~~~~PE~~~~~~   79 (237)
                      +++.++..++.+++.++.++|..+++|+||||+||+++.++.++|+|||++.....   ......+++.|++||.+.+..
T Consensus        99 l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  178 (257)
T cd08223          99 LPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQCDMASTLIGTPYYMSPELFSNKP  178 (257)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCeeccCCCchhEEEecCCcEEEecccceEEecccCCccccccCCcCccChhHhcCCC
Confidence            67889999999999999999999999999999999999999999999998865432   122345678899999998888


Q ss_pred             CCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCc
Q 026540           80 YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWS  159 (237)
Q Consensus        80 ~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (237)
                      ++.++|+||+|++++++++|..||....      .......+..  +..                               
T Consensus       179 ~~~~~Dv~slG~il~~l~~g~~~~~~~~------~~~~~~~~~~--~~~-------------------------------  219 (257)
T cd08223         179 YNYKSDVWALGCCVYEMATLKHAFNAKD------MNSLVYRIIE--GKL-------------------------------  219 (257)
T ss_pred             CCchhhhHHHHHHHHHHHcCCCCCCCCC------HHHHHHHHHh--cCC-------------------------------
Confidence            8999999999999999999999886442      1111111100  000                               


Q ss_pred             hhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCc
Q 026540          160 LDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL  205 (237)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f  205 (237)
                              ...+...+..+.+|+.+|++.+|.+|||+.++++||||
T Consensus       220 --------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~~~~  257 (257)
T cd08223         220 --------PPMPKDYSPELGELIATMLSKRPEKRPSVKSILRQPYI  257 (257)
T ss_pred             --------CCCccccCHHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence                    01123346788999999999999999999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=99.95  E-value=4.3e-28  Score=197.36  Aligned_cols=186  Identities=26%  Similarity=0.321  Sum_probs=135.7

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC--------------cccCcCCC
Q 026540            2 TIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ--------------FAEEIQTR   67 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~--------------~~~~~~~~   67 (237)
                      .+++.++..++.|++++|.|+|..++.|+|+||+||+++.++.++++|||++......              .....+++
T Consensus       111 ~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  190 (311)
T cd07866         111 KLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILIDNQGILKIADFGLARPYDGPPPNPKGGGGGGTRKYTNLVVTR  190 (311)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECcCccchhccCCCcccccCCcccccccccceecc
Confidence            3678999999999999999999999999999999999999999999999988543211              11234567


Q ss_pred             cccchHHhhhc-CCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhccc
Q 026540           68 QYRAPEVILRA-GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRH  146 (237)
Q Consensus        68 ~~~~PE~~~~~-~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  146 (237)
                      .|++||.+.+. .++.++|+||+|++++++++|..||.+.+      .......+.+..+.+++..+.............
T Consensus       191 ~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (311)
T cd07866         191 WYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKS------DIDQLHLIFKLCGTPTEETWPGWRSLPGCEGVH  264 (311)
T ss_pred             CcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHHHhCCCChhhchhhhhcccccccc
Confidence            89999998765 47889999999999999999999997663      556667777777665554433221111110000


Q ss_pred             CccchhccccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCc
Q 026540          147 GDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL  205 (237)
Q Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f  205 (237)
                          ...     ........   ........+.+|+.+||+.||++|||+.+++.||||
T Consensus       265 ----~~~-----~~~~~~~~---~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~~~~f  311 (311)
T cd07866         265 ----SFT-----NYPRTLEE---RFGKLGPEGLDLLSKLLSLDPYKRLTASDALEHPYF  311 (311)
T ss_pred             ----cCC-----CCCccHHH---HcccCChhHHHHHHHHcccCcccCcCHHHHhcCCCC
Confidence                000     00000000   011234678899999999999999999999999998

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=99.95  E-value=4.1e-28  Score=193.94  Aligned_cols=157  Identities=25%  Similarity=0.313  Sum_probs=122.0

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCc---CcccCcCCCcccchHHhhh--
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK---QFAEEIQTRQYRAPEVILR--   77 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~---~~~~~~~~~~~~~PE~~~~--   77 (237)
                      +++..+..++.|++.++.|+|..++.|+|+||+||+++.++.++|+|||++.....   ......++..|++||++.+  
T Consensus       108 l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~nili~~~~~~~l~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~  187 (272)
T cd06637         108 LKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDE  187 (272)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHEEECCCCCEEEccCCCceecccccccCCcccccccccCHhHhcccc
Confidence            67888999999999999999999999999999999999999999999999865432   2234467889999999863  


Q ss_pred             ---cCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcc
Q 026540           78 ---AGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRR  154 (237)
Q Consensus        78 ---~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (237)
                         ..++.++|+||+|++++++++|..||....      ..........   ..                          
T Consensus       188 ~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~------~~~~~~~~~~---~~--------------------------  232 (272)
T cd06637         188 NPDATYDFKSDLWSLGITAIEMAEGAPPLCDMH------PMRALFLIPR---NP--------------------------  232 (272)
T ss_pred             CcCCCCCchhhHHHHHHHHHHHHhCCCCccccC------HHHHHHHHhc---CC--------------------------
Confidence               357889999999999999999999986432      1111100000   00                          


Q ss_pred             ccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCc
Q 026540          155 LKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL  205 (237)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f  205 (237)
                                 ........++..+.+|+.+||+.+|.+|||+++++.||||
T Consensus       233 -----------~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~~  272 (272)
T cd06637         233 -----------APRLKSKKWSKKFQSFIESCLVKNHSQRPTTEQLMKHPFI  272 (272)
T ss_pred             -----------CCCCCCCCcCHHHHHHHHHHcCCChhhCCCHHHHhhCCCC
Confidence                       0000112235678999999999999999999999999998

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=99.95  E-value=4.6e-28  Score=199.33  Aligned_cols=165  Identities=18%  Similarity=0.196  Sum_probs=122.9

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC----cccCcCCCcccchHHhhh-
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ----FAEEIQTRQYRAPEVILR-   77 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~----~~~~~~~~~~~~PE~~~~-   77 (237)
                      +++..+..++.|++.||.|+|..+++||||||+|||++.++.++|+|||++......    .....|++.|+|||++.. 
T Consensus        99 ~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  178 (331)
T cd05597          99 LPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGTVQSNVAVGTPDYISPEILQAM  178 (331)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHHEEECCCCCEEEEECCceeecCCCCCccccceeccccccCHHHHhhc
Confidence            678899999999999999999999999999999999999999999999998654321    122468999999999974 


Q ss_pred             ----cCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhc
Q 026540           78 ----AGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIR  153 (237)
Q Consensus        78 ----~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (237)
                          ..++.++|+||+||+++++++|+.||....      ..+....+......                          
T Consensus       179 ~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~------~~~~~~~i~~~~~~--------------------------  226 (331)
T cd05597         179 EDGKGRYGPECDWWSLGVCMYEMLYGETPFYAES------LVETYGKIMNHKEH--------------------------  226 (331)
T ss_pred             cccccCCCCcceeehhhhHHHHHhhCCCCCCCCC------HHHHHHHHHcCCCc--------------------------
Confidence                346788999999999999999999997542      11111111100000                          


Q ss_pred             cccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCC--CCCCHHHHhcCCCcCcccC
Q 026540          154 RLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPE--KRPTAQQCLQHPWLSLRNS  210 (237)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~--~R~t~~ell~hp~f~~~~~  210 (237)
                          ...       .......+..+.+|+.+||..++.  .|++++++++||||.+.++
T Consensus       227 ----~~~-------~~~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~hp~~~~~~~  274 (331)
T cd05597         227 ----FQF-------PPDVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDHPFFEGIDW  274 (331)
T ss_pred             ----ccC-------CCccCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCCCCCCCCH
Confidence                000       000112467888999998865443  3789999999999987654

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=99.95  E-value=7e-28  Score=193.78  Aligned_cols=184  Identities=27%  Similarity=0.380  Sum_probs=135.3

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC---cccCcCCCcccchHHhhhc-
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ---FAEEIQTRQYRAPEVILRA-   78 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~~~~PE~~~~~-   78 (237)
                      +++.++..++.|++.+|.|+|..++.|+||||+||+++.++.++++|||.+......   .....++..|++||.+.+. 
T Consensus        97 ~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~  176 (284)
T cd07836          97 LDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLINKRGELKLADFGLARAFGIPVNTFSNEVVTLWYRAPDVLLGSR  176 (284)
T ss_pred             cCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCccccccccccccccChHHhcCCC
Confidence            678999999999999999999999999999999999999999999999988543321   2234567889999998765 


Q ss_pred             CCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCC
Q 026540           79 GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFW  158 (237)
Q Consensus        79 ~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (237)
                      .++.++|+||+|++++++++|+.||.+..      .......+.+....+....+........+.......         
T Consensus       177 ~~~~~~Dv~slG~~l~~l~~g~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------  241 (284)
T cd07836         177 TYSTSIDIWSVGCIMAEMITGRPLFPGTN------NEDQLLKIFRIMGTPTESTWPGISQLPEYKPTFPRY---------  241 (284)
T ss_pred             CCCcHHHHHHHHHHHHHHHhCCCCCCCCC------cHHHHHHHHHHhCCCChhhHHHHhcCchhcccccCC---------
Confidence            46889999999999999999999997653      445555555665555444332222111111100000         


Q ss_pred             chhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCc
Q 026540          159 SLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL  205 (237)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f  205 (237)
                      ....    ........+..+.+++.+||+.||.+||+++|+++||||
T Consensus       242 ~~~~----~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~~f  284 (284)
T cd07836         242 PPQD----LQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQHPWF  284 (284)
T ss_pred             ChHH----HHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence            0000    001122346778999999999999999999999999998

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=99.95  E-value=3.5e-28  Score=202.89  Aligned_cols=163  Identities=20%  Similarity=0.257  Sum_probs=123.8

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC----cccCcCCCcccchHHhhh
Q 026540            2 TIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ----FAEEIQTRQYRAPEVILR   77 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~----~~~~~~~~~~~~PE~~~~   77 (237)
                      .+++..+..++.|++.||.|+|..+++||||||+|||++.++.+||+|||++......    .....|++.|+|||++..
T Consensus       138 ~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll~~~~~ikL~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~l~~  217 (371)
T cd05622         138 DVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKS  217 (371)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEECCCCCEEEEeCCceeEcCcCCcccccCcccCccccCHHHHhc
Confidence            3578889999999999999999999999999999999999999999999998754421    224568999999999975


Q ss_pred             cC----CCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhc
Q 026540           78 AG----YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIR  153 (237)
Q Consensus        78 ~~----~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (237)
                      ..    ++.++|+||+||++++|++|..||.+.+      .......+.......                         
T Consensus       218 ~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~------~~~~~~~i~~~~~~~-------------------------  266 (371)
T cd05622         218 QGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADS------LVGTYSKIMNHKNSL-------------------------  266 (371)
T ss_pred             cCCCccCCCccceeehhHHHHHHHhCCCCCCCCC------HHHHHHHHHcCCCcc-------------------------
Confidence            42    7889999999999999999999997653      211111111100000                         


Q ss_pred             cccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCC--CCCHHHHhcCCCcCcc
Q 026540          154 RLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEK--RPTAQQCLQHPWLSLR  208 (237)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~--R~t~~ell~hp~f~~~  208 (237)
                                   ........+..+.++|..||..++.+  |++++++++|+||...
T Consensus       267 -------------~~~~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~~~~~~  310 (371)
T cd05622         267 -------------TFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKND  310 (371)
T ss_pred             -------------cCCCcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcCcccCCC
Confidence                         00011234678899999999843332  7799999999999864

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=99.95  E-value=7.2e-28  Score=193.42  Aligned_cols=186  Identities=26%  Similarity=0.347  Sum_probs=137.5

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC---cccCcCCCcccchHHhhhc
Q 026540            2 TIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ---FAEEIQTRQYRAPEVILRA   78 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~~~~PE~~~~~   78 (237)
                      .+++.++..++.+++.+|.|+|..++.|+||||+||+++.++.++++|||.+......   .....++..|++||.+.+.
T Consensus        94 ~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~  173 (283)
T cd05118          94 GLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLINTEGVLKLADFGLARSFGSPVRPYTHYVVTRWYRAPELLLGD  173 (283)
T ss_pred             cCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCcccccCccCcccccCcHHHhcC
Confidence            3577889999999999999999999999999999999999999999999988655432   2334567889999999876


Q ss_pred             -CCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccC
Q 026540           79 -GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKF  157 (237)
Q Consensus        79 -~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (237)
                       .++.++|+||+|++++++++|+.+|...+      ..+....+.+.++.+....+............     .......
T Consensus       174 ~~~~~~~Di~slG~~l~~l~tg~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~  242 (283)
T cd05118         174 KGYSTPVDIWSVGCIFAELLSRRPLFPGKS------EIDQLFKIFRTLGTPDPEVWPKFTSLARNYKF-----SFPKKAG  242 (283)
T ss_pred             CCCCchhHHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHHHcCCCchHhcccchhhhhhhhh-----hhccccc
Confidence             68899999999999999999999997653      55566666666655544333221111000000     0000000


Q ss_pred             CchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCc
Q 026540          158 WSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL  205 (237)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f  205 (237)
                      ...       .......+..+.+||.+||+.||.+||++++++.||||
T Consensus       243 ~~~-------~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~~~~  283 (283)
T cd05118         243 MPL-------PKLFPNASPQALDLLSQMLHYDPHKRITAEQALAHPYF  283 (283)
T ss_pred             cCH-------HHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhCCCC
Confidence            000       11123457889999999999999999999999999997

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=99.95  E-value=5.6e-28  Score=193.04  Aligned_cols=159  Identities=21%  Similarity=0.281  Sum_probs=125.9

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCC-cEEEeecCcceecCcCcccCcCCCcccchHHhhhcCCC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDM-RCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYS   81 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~-~~kl~dfg~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~   81 (237)
                      +++.++..++.|++.||.|+|..+++|+||||+||+++.++ .++++|||.+...... ....++..|+|||++.+..++
T Consensus       106 l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~  184 (267)
T PHA03390        106 LSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYDRAKDRIYLCDYGLCKIIGTP-SCYDGTLDYFSPEKIKGHNYD  184 (267)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEeCCCCeEEEecCccceecCCC-ccCCCCCcccChhhhcCCCCC
Confidence            67899999999999999999999999999999999999988 9999999988655433 234568899999999888899


Q ss_pred             chhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCchh
Q 026540           82 FSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLD  161 (237)
Q Consensus        82 ~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (237)
                      .++|+||+|++++++++|..||......     ..........                                     
T Consensus       185 ~~~DvwslG~il~~l~~g~~p~~~~~~~-----~~~~~~~~~~-------------------------------------  222 (267)
T PHA03390        185 VSFDWWAVGVLTYELLTGKHPFKEDEDE-----ELDLESLLKR-------------------------------------  222 (267)
T ss_pred             chhhHHHHHHHHHHHHHCCCCCCCCCcc-----hhhHHHHHHh-------------------------------------
Confidence            9999999999999999999999744211     0000100000                                     


Q ss_pred             HHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCC-HHHHhcCCCcC
Q 026540          162 RLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPT-AQQCLQHPWLS  206 (237)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t-~~ell~hp~f~  206 (237)
                        ...........+..+.+||.+||+.+|.+|++ ++|+++||||+
T Consensus       223 --~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~h~~~~  266 (267)
T PHA03390        223 --QQKKLPFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIKHPFLK  266 (267)
T ss_pred             --hcccCCcccccCHHHHHHHHHHhccChhhCCchHHHHhcCCccc
Confidence              00011122345778999999999999999996 69999999997

>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.95  E-value=1.7e-28  Score=187.77  Aligned_cols=190  Identities=23%  Similarity=0.351  Sum_probs=144.3

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecC----cCcccCcCCCcccchHHhhhc
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRAN----KQFAEEIQTRQYRAPEVILRA   78 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~----~~~~~~~~~~~~~~PE~~~~~   78 (237)
                      |+...++-++.||++||.|+|+.+|-||||||.|.|++++-.+||+|||+++...    ...+..+-|.+|++||.+++.
T Consensus       153 Ls~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d~~~hMTqEVVTQYYRAPEiLMGa  232 (449)
T KOG0664|consen  153 LTPDHVKVFVYQILRGLKYLHTANILHRDIKPGNLLVNSNCILKICDFGLARTWDQRDRLNMTHEVVTQYYRAPELLMGA  232 (449)
T ss_pred             CCcchhhhhHHHHHhhhHHHhhcchhhccCCCccEEeccCceEEecccccccccchhhhhhhHHHHHHHHhccHHHhhcc
Confidence            4667788899999999999999999999999999999999999999999997543    234555678899999999987


Q ss_pred             -CCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccC
Q 026540           79 -GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKF  157 (237)
Q Consensus        79 -~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (237)
                       .|+...|+||+||++.|++.++.+|...      ....+++++...+|++...-.....+....       ...+....
T Consensus       233 RhYs~AvDiWSVGCIFaELLgRrILFQAq------~PiqQL~lItdLLGTPs~EaMr~ACEGAk~-------H~LR~~~k  299 (449)
T KOG0664|consen  233 RRYTGAVDIWSVGCIFAELLQRKILFQAA------GPIEQLQMIIDLLGTPSQEAMKYACEGAKN-------HVLRAGLR  299 (449)
T ss_pred             hhhcCccceehhhHHHHHHHhhhhhhhcc------ChHHHHHHHHHHhCCCcHHHHHHHhhhhHH-------HhhccCCC
Confidence             4899999999999999999999999876      488999999999999876543221111110       00000000


Q ss_pred             CchhHHhhhhcCC--CHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcc
Q 026540          158 WSLDRLLVDKYRF--SETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLR  208 (237)
Q Consensus       158 ~~~~~~~~~~~~~--~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~  208 (237)
                      .+...   ..+..  +.....+...++..+|.+||.+|.+.++++.|+|....
T Consensus       300 ~Ps~~---vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~~~~e~  349 (449)
T KOG0664|consen  300 APDTQ---RLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHRYLEEG  349 (449)
T ss_pred             CCCcc---ceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhccccccccc
Confidence            00000   01111  12223566789999999999999999999999998754

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.95  E-value=4e-28  Score=193.04  Aligned_cols=157  Identities=20%  Similarity=0.290  Sum_probs=124.1

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC------cccCcCCCcccchHHhh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ------FAEEIQTRQYRAPEVIL   76 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~------~~~~~~~~~~~~PE~~~   76 (237)
                      +++..+..++.+++.+|.|+|..+++|+||+|+||+++.++.++|+|||++......      .....++..|+|||.+.
T Consensus       101 ~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  180 (263)
T cd06625         101 LTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICSSGTGMKSVTGTPYWMSPEVIS  180 (263)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccceeccccccccccccCCCcCccccCcceec
Confidence            467888999999999999999999999999999999999999999999988543221      12345678899999999


Q ss_pred             hcCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcccc
Q 026540           77 RAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLK  156 (237)
Q Consensus        77 ~~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (237)
                      +..++.++|+||+|++++++++|+.||....      ....   .......                             
T Consensus       181 ~~~~~~~~Di~slG~il~el~~g~~p~~~~~------~~~~---~~~~~~~-----------------------------  222 (263)
T cd06625         181 GEGYGRKADVWSVGCTVVEMLTEKPPWAEFE------AMAA---IFKIATQ-----------------------------  222 (263)
T ss_pred             cCCCCchhhhHHHHHHHHHHHhCCCCccccc------hHHH---HHHHhcc-----------------------------
Confidence            8889999999999999999999999986542      1111   1010000                             


Q ss_pred             CCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCc
Q 026540          157 FWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL  205 (237)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f  205 (237)
                              ......+...+..+.+++.+||..+|.+|||+.++++|+||
T Consensus       223 --------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~  263 (263)
T cd06625         223 --------PTNPQLPSHVSPDARNFLRRTFVENAKKRPSAEELLRHFFV  263 (263)
T ss_pred             --------CCCCCCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhCCCC
Confidence                    00112233456778999999999999999999999999998

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=99.95  E-value=1.9e-27  Score=191.34  Aligned_cols=181  Identities=27%  Similarity=0.375  Sum_probs=133.3

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC--cccCcCCCcccchHHhhhcCC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ--FAEEIQTRQYRAPEVILRAGY   80 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~--~~~~~~~~~~~~PE~~~~~~~   80 (237)
                      +++.++..++.|++.||.|+|..++.|+|++|+||+++.++.++++|||.+......  .....++..|++||.+.+..+
T Consensus       104 l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~  183 (287)
T cd07838         104 LPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVTSDGQVKIADFGLARIYSFEMALTSVVVTLWYRAPEVLLQSSY  183 (287)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhEEEccCCCEEEeccCcceeccCCcccccccccccccChHHhccCCC
Confidence            678899999999999999999999999999999999999999999999988665322  223346788999999988888


Q ss_pred             CchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCC-chhhhcccCccchhccccCCc
Q 026540           81 SFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQ-SKDYFDRHGDLKRIRRLKFWS  159 (237)
Q Consensus        81 ~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  159 (237)
                      +.++|+||+|++++++++|..||.+.+      ..+.+..+....+.....-+..... ....+...         ....
T Consensus       184 ~~~~Di~s~G~~l~~l~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~  248 (287)
T cd07838         184 ATPVDMWSVGCIFAELFRRRPLFRGTS------EADQLDKIFDVIGLPSEEEWPRNVSLPRSSFPSY---------TPRS  248 (287)
T ss_pred             CCcchhhhHHHHHHHHHhCCCcccCCC------hHHHHHHHHHHcCCCChHhcCCCcccchhhcccc---------cccc
Confidence            999999999999999999999987653      4455555555443332221111000 00000000         0000


Q ss_pred             hhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCc
Q 026540          160 LDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL  205 (237)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f  205 (237)
                      .       .......+..+.+++.+||+.||.+||+++++++||||
T Consensus       249 ~-------~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~~~~~  287 (287)
T cd07838         249 F-------KSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQHPYF  287 (287)
T ss_pred             h-------hhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhcCcCC
Confidence            0       01112346778899999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]

Probab=99.95  E-value=1.2e-28  Score=197.43  Aligned_cols=161  Identities=20%  Similarity=0.276  Sum_probs=128.8

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecC--cCcccCcCCCcccchHHhhhcC
Q 026540            2 TIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRAN--KQFAEEIQTRQYRAPEVILRAG   79 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~--~~~~~~~~~~~~~~PE~~~~~~   79 (237)
                      .|+|.+++.|++||++|.||+|.++..|||||.+|||+|.+..+||+|||++..+.  .-...++|++.|.+||.+.+.+
T Consensus       149 ~LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENILLD~N~NiKIADFGLSNly~~~kfLqTFCGSPLYASPEIvNG~P  228 (668)
T KOG0611|consen  149 SLSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENILLDQNNNIKIADFGLSNLYADKKFLQTFCGSPLYASPEIVNGTP  228 (668)
T ss_pred             cccHHHHHHHHHHHHHHHHHHhhccceecccchhheeecCCCCeeeeccchhhhhccccHHHHhcCCcccCCccccCCCC
Confidence            37899999999999999999999999999999999999999999999999986554  3456789999999999999999


Q ss_pred             C-CchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCC
Q 026540           80 Y-SFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFW  158 (237)
Q Consensus        80 ~-~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (237)
                      | ++.+|.||+|+++|.++.|.+||.+..      .......+                                     
T Consensus       229 Y~GPEVDsWsLGvLLYtLVyGtMPFDG~D------hk~lvrQI-------------------------------------  265 (668)
T KOG0611|consen  229 YKGPEVDSWSLGVLLYTLVYGTMPFDGRD------HKRLVRQI-------------------------------------  265 (668)
T ss_pred             CCCCccchhhHHHHHHHHhhcccccCCch------HHHHHHHh-------------------------------------
Confidence            8 678999999999999999999998763      11111111                                     


Q ss_pred             chhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccCCc
Q 026540          159 SLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNSTR  212 (237)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~~~  212 (237)
                           ....|..+. -+..+.-||+.||..||++|.|++++-.|=|++ |....
T Consensus       266 -----s~GaYrEP~-~PSdA~gLIRwmLmVNP~RRATieDiAsHWWvN-wgy~~  312 (668)
T KOG0611|consen  266 -----SRGAYREPE-TPSDASGLIRWMLMVNPERRATIEDIASHWWVN-WGYNM  312 (668)
T ss_pred             -----hcccccCCC-CCchHHHHHHHHHhcCcccchhHHHHhhhheee-ccccc
Confidence                 111111111 234556899999999999999999998775554 54433

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=99.95  E-value=4.5e-28  Score=194.72  Aligned_cols=172  Identities=22%  Similarity=0.267  Sum_probs=129.6

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCc-CcccCcCCCcccchHHhhhcCCC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK-QFAEEIQTRQYRAPEVILRAGYS   81 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~-~~~~~~~~~~~~~PE~~~~~~~~   81 (237)
                      +++..+..++.|++.||.|+|..+++|+||||+||+++.++.++|+|||++..... ......++..|++||.+.+..++
T Consensus        92 ~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  171 (279)
T cd06619          92 IPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNSIAKTYVGTNAYMAPERISGEQYG  171 (279)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEECCCCCEEEeeCCcceecccccccCCCCChhhcCceeecCCCCC
Confidence            46788899999999999999999999999999999999999999999999865433 23345778899999999888899


Q ss_pred             chhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCchh
Q 026540           82 FSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLD  161 (237)
Q Consensus        82 ~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (237)
                      .++|+||+|++++++++|..||.......  ...... ..........                                
T Consensus       172 ~~~DvwslG~~l~~l~~g~~pf~~~~~~~--~~~~~~-~~~~~~~~~~--------------------------------  216 (279)
T cd06619         172 IHSDVWSLGISFMELALGRFPYPQIQKNQ--GSLMPL-QLLQCIVDED--------------------------------  216 (279)
T ss_pred             CcchHHHHHHHHHHHHhCCCCchhhcccc--cccchH-HHHHHHhccC--------------------------------
Confidence            99999999999999999999986432100  000000 0000000000                                


Q ss_pred             HHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccCCcc
Q 026540          162 RLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNSTRD  213 (237)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~~~~  213 (237)
                          .........+..+.+|+.+||+.+|++||+++++++||||...+....
T Consensus       217 ----~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~~~~~~~~~~~~  264 (279)
T cd06619         217 ----PPVLPVGQFSEKFVHFITQCMRKQPKERPAPENLMDHPFIVQYNDGNA  264 (279)
T ss_pred             ----CCCCCCCcCCHHHHHHHHHHhhCChhhCCCHHHHhcCcccccccCccH
Confidence                000001123567899999999999999999999999999988765554

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=99.95  E-value=2.5e-27  Score=190.22  Aligned_cols=185  Identities=26%  Similarity=0.376  Sum_probs=138.6

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCc---CcccCcCCCcccchHHhhhc
Q 026540            2 TIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK---QFAEEIQTRQYRAPEVILRA   78 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~---~~~~~~~~~~~~~PE~~~~~   78 (237)
                      .+++.++..++.+++.+|.++|..++.|+||+|+||+++.++.++|+|||.+.....   ......++..|++||.+...
T Consensus        94 ~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~  173 (282)
T cd07829          94 PLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILINRDGVLKLADFGLARAFGIPLRTYTHEVVTLWYRAPEILLGS  173 (282)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChheEEEcCCCCEEEecCCcccccCCCccccCccccCcCcCChHHhcCC
Confidence            467889999999999999999999999999999999999999999999998865432   22233456789999999876


Q ss_pred             -CCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccC
Q 026540           79 -GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKF  157 (237)
Q Consensus        79 -~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (237)
                       .++.++|+||+|++++++++|..||....      ....+..+.+..+......+........+........      .
T Consensus       174 ~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~  241 (282)
T cd07829         174 KHYSTAVDIWSVGCIFAEMITGKPLFPGDS------EIDQLFKIFQILGTPTEESWPGVTKLPDYKPTFPKFP------P  241 (282)
T ss_pred             cCCCccccHHHHHHHHHHHHhCCCCCCCcc------HHHHHHHHHHHhCCCcHHHHHhhcccccccccccccC------c
Confidence             67889999999999999999999987653      5566677777777666655433222211110000000      0


Q ss_pred             CchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCc
Q 026540          158 WSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL  205 (237)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f  205 (237)
                      ......       ....+..+.+++.+||..+|++||++++++.||||
T Consensus       242 ~~~~~~-------~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~p~~  282 (282)
T cd07829         242 KDLEKV-------LPRLDPEGIDLLSKMLQYNPAKRISAKEALKHPYF  282 (282)
T ss_pred             cchHHh-------cccccHHHHHHHHHhhccCcccCCCHHHHhhCcCC
Confidence            000000       11226778999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=99.95  E-value=5.4e-28  Score=199.00  Aligned_cols=165  Identities=15%  Similarity=0.217  Sum_probs=123.3

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC----cccCcCCCcccchHHhhh-
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ----FAEEIQTRQYRAPEVILR-   77 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~----~~~~~~~~~~~~PE~~~~-   77 (237)
                      +++..+..++.|++.+|.|+|..+++||||||+||+++.++.++|+|||++......    .....|++.|+|||++.. 
T Consensus        99 l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  178 (332)
T cd05623          99 LPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAM  178 (332)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEeecchheecccCCcceecccccCccccCHHHHhcc
Confidence            567889999999999999999999999999999999999999999999988543211    223468999999999873 


Q ss_pred             ----cCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhc
Q 026540           78 ----AGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIR  153 (237)
Q Consensus        78 ----~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (237)
                          ..++.++|+||+|++++++++|..||....      .......+   .....        +               
T Consensus       179 ~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~------~~~~~~~i---~~~~~--------~---------------  226 (332)
T cd05623         179 EDGKGKYGPECDWWSLGVCMYEMLYGETPFYAES------LVETYGKI---MNHKE--------R---------------  226 (332)
T ss_pred             ccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCC------HHHHHHHH---hCCCc--------c---------------
Confidence                357889999999999999999999997542      21222111   10000        0               


Q ss_pred             cccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCC--CCCHHHHhcCCCcCcccC
Q 026540          154 RLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEK--RPTAQQCLQHPWLSLRNS  210 (237)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~--R~t~~ell~hp~f~~~~~  210 (237)
                          .+       ........+.++.+|+.+||..++.+  |++++++++||||.+.++
T Consensus       227 ----~~-------~p~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h~~f~~~~~  274 (332)
T cd05623         227 ----FQ-------FPAQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQHPFFTGIDW  274 (332)
T ss_pred             ----cc-------CCCccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCCCCcCCCCH
Confidence                00       00011234678899999998664443  689999999999997654

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=99.95  E-value=3.5e-28  Score=196.06  Aligned_cols=169  Identities=22%  Similarity=0.292  Sum_probs=128.1

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhh-cCCccCCCCCccccCCCCcEEEeecCcceecCcC--cccCcCCCcccchHHhhhc-
Q 026540            3 IVEKKLKRRAKRAVANISIRRAS-MGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ--FAEEIQTRQYRAPEVILRA-   78 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~-~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~--~~~~~~~~~~~~PE~~~~~-   78 (237)
                      +++..+.+++.+++.||+|+|.. ++.||||||+||+++.++.++|+|||++......  .....++..|++||.+.+. 
T Consensus       104 l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  183 (288)
T cd06616         104 IPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILLDRNGNIKLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPSA  183 (288)
T ss_pred             CCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEEccCCcEEEeecchhHHhccCCccccccCccCccCHHHhcccc
Confidence            56788999999999999999975 8999999999999999999999999988543322  2234568889999999876 


Q ss_pred             --CCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcccc
Q 026540           79 --GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLK  156 (237)
Q Consensus        79 --~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (237)
                        .++.++|+||+|++++++++|..||....        .....+.+.....+...                        
T Consensus       184 ~~~~~~~~Di~slG~il~el~~g~~p~~~~~--------~~~~~~~~~~~~~~~~~------------------------  231 (288)
T cd06616         184 RDGYDVRSDVWSLGITLYEVATGKFPYPKWN--------SVFDQLTQVVKGDPPIL------------------------  231 (288)
T ss_pred             ccCCcchhhhhHHHHHHHHHHhCCCCchhcc--------hHHHHHhhhcCCCCCcC------------------------
Confidence              57889999999999999999999986431        11111211111000000                        


Q ss_pred             CCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccCCcc
Q 026540          157 FWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNSTRD  213 (237)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~~~~  213 (237)
                                ....+...+..+.+|+.+||+.+|++|||+++++.||||........
T Consensus       232 ----------~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~~~~~~~~~~~~  278 (288)
T cd06616         232 ----------SNSEEREFSPSFVNFINLCLIKDESKRPKYKELLEHPFIKDYEERNV  278 (288)
T ss_pred             ----------CCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhchhhcch
Confidence                      00011234678899999999999999999999999999987665444

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=99.95  E-value=1.1e-27  Score=197.24  Aligned_cols=189  Identities=25%  Similarity=0.360  Sum_probs=139.2

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecC-----------------cCcccCcC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRAN-----------------KQFAEEIQ   65 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~-----------------~~~~~~~~   65 (237)
                      +++..+..++.|++.+|+|+|..+++|+||||+||+++.++.++++|||.+....                 .......+
T Consensus       116 ~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  195 (335)
T PTZ00024        116 LTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFINSKGICKIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVV  195 (335)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHeEECCCCCEEECCccceeeccccccccccccccccccccccccccc
Confidence            5788899999999999999999999999999999999999999999999886543                 11122345


Q ss_pred             CCcccchHHhhhcC-CCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhc
Q 026540           66 TRQYRAPEVILRAG-YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFD  144 (237)
Q Consensus        66 ~~~~~~PE~~~~~~-~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  144 (237)
                      +..|++||.+.+.. ++.++|+||+|++++++++|..||....      +...+..+.+..+.++...++.......+..
T Consensus       196 ~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~------~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~  269 (335)
T PTZ00024        196 TLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGEN------EIDQLGRIFELLGTPNEDNWPQAKKLPLYTE  269 (335)
T ss_pred             ccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHHHhCCCchhhCcchhhcccccc
Confidence            77899999987654 6889999999999999999999997663      5566677777776665543322211111100


Q ss_pred             ccCccchhccccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccCC
Q 026540          145 RHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNST  211 (237)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~~  211 (237)
                      ....       ......       ......+..+.+++.+||+.+|++|||++|++.||||.....+
T Consensus       270 ~~~~-------~~~~~~-------~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~~~~~~~~~~  322 (335)
T PTZ00024        270 FTPR-------KPKDLK-------TIFPNASDDAIDLLQSLLKLNPLERISAKEALKHEYFKSDPLP  322 (335)
T ss_pred             cCcC-------CcccHH-------HhCcCCChHHHHHHHHHcCCCchhccCHHHHhcCcccCCCCCC
Confidence            0000       000000       0112335778899999999999999999999999999976544

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=99.95  E-value=1.1e-27  Score=197.90  Aligned_cols=196  Identities=23%  Similarity=0.338  Sum_probs=132.4

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCC-CCcEEEeecCcceecCcC------cccCcCCCcccchHHh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGI-DMRCKVVDFGNACRANKQ------FAEEIQTRQYRAPEVI   75 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~-~~~~kl~dfg~~~~~~~~------~~~~~~~~~~~~PE~~   75 (237)
                      +++..+..++.|++.||.|+|..+++||||||+||+++. ++.++++|||.+......      .....++..|+|||.+
T Consensus       111 l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~Nili~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~  190 (342)
T cd07854         111 LSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFINTEDLVLKIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLL  190 (342)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCceEEECCcccceecCCccccccccccccccccccCHHHH
Confidence            578899999999999999999999999999999999975 567899999988654321      1223567889999988


Q ss_pred             hhc-CCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCc-cchhc
Q 026540           76 LRA-GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGD-LKRIR  153 (237)
Q Consensus        76 ~~~-~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~  153 (237)
                      .+. .++.++|+||+||+++++++|..||....      .....................      .+...... .....
T Consensus       191 ~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~------~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~  258 (342)
T cd07854         191 LSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAH------ELEQMQLILESVPVVREEDRN------ELLNVIPSFVRNDG  258 (342)
T ss_pred             hCccccCchhhHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHHhcCCCChHHhh------hhhhhhhhhhhhcc
Confidence            654 57889999999999999999999997653      222222222221111111000      00000000 00000


Q ss_pred             cccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccCCcccccc
Q 026540          154 RLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNSTRDETKN  217 (237)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~~~~~~~~  217 (237)
                      .....+....       ....+.++.+|+.+||+.||.+|||++++++||||.....+.+++..
T Consensus       259 ~~~~~~~~~~-------~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h~~~~~~~~~~~~~~~  315 (342)
T cd07854         259 GEPRRPLRDL-------LPGVNPEALDFLEQILTFNPMDRLTAEEALMHPYMSCYSCPFDEPVS  315 (342)
T ss_pred             cccCCCHHHH-------ccCCCHHHHHHHHHHhCCCchhccCHHHHhCCCccccccCCccccCC
Confidence            0001111111       12346778999999999999999999999999999977655554443

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.95  E-value=3.1e-28  Score=202.84  Aligned_cols=159  Identities=23%  Similarity=0.253  Sum_probs=130.8

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcCcccCcCCCcccchHHhh---hc
Q 026540            2 TIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVIL---RA   78 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~PE~~~---~~   78 (237)
                      +|-|-+++.|..+.|.||.|+|+.+.+|||||..|||++..|.|||+|||++... .+...++||++|||||++.   .+
T Consensus       122 plqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILLse~g~VKLaDFGSAsi~-~PAnsFvGTPywMAPEVILAMDEG  200 (948)
T KOG0577|consen  122 PLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILLSEPGLVKLADFGSASIM-APANSFVGTPYWMAPEVILAMDEG  200 (948)
T ss_pred             cchHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEecCCCeeeeccccchhhc-CchhcccCCccccchhHheecccc
Confidence            4668899999999999999999999999999999999999999999999988543 5667889999999999997   46


Q ss_pred             CCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCC
Q 026540           79 GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFW  158 (237)
Q Consensus        79 ~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (237)
                      +|+.++||||+|+.+.++..+++|++.++      -...+..|..   .-+                             
T Consensus       201 qYdgkvDvWSLGITCIELAERkPPlFnMN------AMSALYHIAQ---Nes-----------------------------  242 (948)
T KOG0577|consen  201 QYDGKVDVWSLGITCIELAERKPPLFNMN------AMSALYHIAQ---NES-----------------------------  242 (948)
T ss_pred             ccCCccceeeccchhhhhhhcCCCccCch------HHHHHHHHHh---cCC-----------------------------
Confidence            79999999999999999999999888663      2222222111   000                             


Q ss_pred             chhHHhhhhcCC-CHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcc
Q 026540          159 SLDRLLVDKYRF-SETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLR  208 (237)
Q Consensus       159 ~~~~~~~~~~~~-~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~  208 (237)
                               ..+ ...-+..|.+|+..||+.-|..|||.+++|.|+|+..-
T Consensus       243 ---------PtLqs~eWS~~F~~Fvd~CLqKipqeRptse~ll~H~fv~R~  284 (948)
T KOG0577|consen  243 ---------PTLQSNEWSDYFRNFVDSCLQKIPQERPTSEELLKHRFVLRE  284 (948)
T ss_pred             ---------CCCCCchhHHHHHHHHHHHHhhCcccCCcHHHHhhcchhccC
Confidence                     001 11236789999999999999999999999999999744

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=99.95  E-value=4.8e-28  Score=194.50  Aligned_cols=166  Identities=21%  Similarity=0.294  Sum_probs=130.5

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCc-CcccCcCCCcccchHHhhhc-CC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK-QFAEEIQTRQYRAPEVILRA-GY   80 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~-~~~~~~~~~~~~~PE~~~~~-~~   80 (237)
                      +++.++..++.|++.|++|+|+.++.|+|+||+||+++.++.++++|||++..... ......++..|++||.+.++ .+
T Consensus        94 l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  173 (278)
T cd05606          94 FSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAY  173 (278)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEECCCCCEEEccCcCccccCccCCcCcCCCcCCcCcHHhcCCCCC
Confidence            57889999999999999999999999999999999999999999999998864432 22234678999999999755 57


Q ss_pred             CchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCch
Q 026540           81 SFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSL  160 (237)
Q Consensus        81 ~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (237)
                      +.++|+||+|++++++++|..||.......   .....    +.                                    
T Consensus       174 ~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~---~~~~~----~~------------------------------------  210 (278)
T cd05606         174 DSSADWFSLGCMLFKLLRGHSPFRQHKTKD---KHEID----RM------------------------------------  210 (278)
T ss_pred             CcccchHhHHHHHHHHHhCCCCCCCCCccc---hHHHH----HH------------------------------------
Confidence            889999999999999999999997542110   00000    00                                    


Q ss_pred             hHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCC-----CHHHHhcCCCcCcccCCcc
Q 026540          161 DRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRP-----TAQQCLQHPWLSLRNSTRD  213 (237)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~-----t~~ell~hp~f~~~~~~~~  213 (237)
                        ........+...+..+.+++.+||..+|.+|+     ++.++++||||+...+...
T Consensus       211 --~~~~~~~~~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~~~~~~~~~~~~  266 (278)
T cd05606         211 --TLTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEHPFFRSLDWQMV  266 (278)
T ss_pred             --hhccCCCCCCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHhCccccCCCchHh
Confidence              00001122334567899999999999999999     9999999999998775554

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.95  E-value=5.2e-28  Score=198.52  Aligned_cols=158  Identities=20%  Similarity=0.264  Sum_probs=134.8

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC---cccCcCCCcccchHHhhhc
Q 026540            2 TIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ---FAEEIQTRQYRAPEVILRA   78 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~~~~PE~~~~~   78 (237)
                      .+.|+++.+.+.|++.|+.|+|..++.|||||+.||++..+..++|+|||++..++..   ....+||+.|++||.+.+.
T Consensus       102 ~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~~~a~tvvGTp~YmcPEil~d~  181 (426)
T KOG0589|consen  102 LFPEERILKWFVQILLAVNYLHENRVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPEDSLASTVVGTPYYMCPEILSDI  181 (426)
T ss_pred             cccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhccccCceeecchhhhhhcCCchhhhheecCCCcccCHHHhCCC
Confidence            4789999999999999999999999999999999999999999999999999877643   4567999999999999999


Q ss_pred             CCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCC
Q 026540           79 GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFW  158 (237)
Q Consensus        79 ~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (237)
                      +|+.++|+||+||++++|.+-+.+|.+.+      .......+.+..                                 
T Consensus       182 pYn~KSDiWsLGC~~yEm~~lk~aF~a~~------m~~Li~ki~~~~---------------------------------  222 (426)
T KOG0589|consen  182 PYNEKSDIWSLGCCLYEMCTLKPAFKASN------MSELILKINRGL---------------------------------  222 (426)
T ss_pred             CCCccCcchhhcchHHHHHhcccccCccc------hHHHHHHHhhcc---------------------------------
Confidence            99999999999999999999999997763      222222222211                                 


Q ss_pred             chhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcC
Q 026540          159 SLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLS  206 (237)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~  206 (237)
                              ....+...+.++..++..||..+|+.||++.++|.+|...
T Consensus       223 --------~~Plp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~P~l~  262 (426)
T KOG0589|consen  223 --------YSPLPSMYSSELRSLVKSMLRKNPEHRPSALELLRRPHLL  262 (426)
T ss_pred             --------CCCCCccccHHHHHHHHHHhhcCCccCCCHHHHhhChhhh
Confidence                    1233555678999999999999999999999999998766

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=99.95  E-value=7.9e-28  Score=198.38  Aligned_cols=153  Identities=18%  Similarity=0.217  Sum_probs=118.3

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC-----cccCcCCCcccchHHhhh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ-----FAEEIQTRQYRAPEVILR   77 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~-----~~~~~~~~~~~~PE~~~~   77 (237)
                      +++.++..++.|++.||+|+|+.+++||||||+||+++.++.++|+|||++......     .....++..|+|||++.+
T Consensus       171 l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  250 (338)
T cd05102         171 LTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLKWMAPESIFD  250 (338)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCccccCcHHhhc
Confidence            667889999999999999999999999999999999999999999999998653221     112234578999999998


Q ss_pred             cCCCchhhhhhhhhHHHHHhc-CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcccc
Q 026540           78 AGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLK  156 (237)
Q Consensus        78 ~~~~~~~diws~g~~l~~~~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (237)
                      ..++.++|+||+|++++++++ |..||.+..     ........+   ...                             
T Consensus       251 ~~~~~~sDiwslG~il~el~~~g~~pf~~~~-----~~~~~~~~~---~~~-----------------------------  293 (338)
T cd05102         251 KVYTTQSDVWSFGVLLWEIFSLGASPYPGVQ-----INEEFCQRL---KDG-----------------------------  293 (338)
T ss_pred             CCCCcccCHHHHHHHHHHHHhCCCCCCCCCC-----ccHHHHHHH---hcC-----------------------------
Confidence            889999999999999999996 889986542     111111100   000                             


Q ss_pred             CCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhc
Q 026540          157 FWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ  201 (237)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  201 (237)
                               .....+...+..+.+++.+||+.||.+|||+.++++
T Consensus       294 ---------~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~el~~  329 (338)
T cd05102         294 ---------TRMRAPENATPEIYRIMLACWQGDPKERPTFSALVE  329 (338)
T ss_pred             ---------CCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence                     001112344677899999999999999999999985

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=99.95  E-value=2.6e-28  Score=191.63  Aligned_cols=151  Identities=24%  Similarity=0.256  Sum_probs=121.7

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcCcccCcCCCcccchHHhhhcCCCc
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSF   82 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~   82 (237)
                      +++..+..++.|+++||.|+|..++.|+||||+||+++.++.++++|||.+...........++..|++||.+....++.
T Consensus        82 l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  161 (237)
T cd05576          82 IPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSCDGEAVENMYCAPEVGGISEETE  161 (237)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEecccchhccccccccCCcCccccCCcccCCCCCCc
Confidence            57888999999999999999999999999999999999999999999998765544444445577899999987777889


Q ss_pred             hhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCchhH
Q 026540           83 SVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDR  162 (237)
Q Consensus        83 ~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (237)
                      ++|+||+|++++++++|..++......                      .           ..                 
T Consensus       162 ~~DvwslG~il~el~~g~~~~~~~~~~----------------------~-----------~~-----------------  191 (237)
T cd05576         162 ACDWWSLGAILFELLTGKTLVECHPSG----------------------I-----------NT-----------------  191 (237)
T ss_pred             hhhHHHHHHHHHHHHHCcchhhcCchh----------------------c-----------cc-----------------
Confidence            999999999999999998776422100                      0           00                 


Q ss_pred             HhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCH-----HHHhcCCCc
Q 026540          163 LLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTA-----QQCLQHPWL  205 (237)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~-----~ell~hp~f  205 (237)
                        ......+...+..+.+++.+||+.||++|+++     +++++||||
T Consensus       192 --~~~~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h~~~  237 (237)
T cd05576         192 --HTTLNIPEWVSEEARSLLQQLLQFNPTERLGAGVAGVEDIKSHPFF  237 (237)
T ss_pred             --ccccCCcccCCHHHHHHHHHHccCCHHHhcCCCccchHHHHcCCCC
Confidence              00011233346778999999999999999985     999999998

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=99.95  E-value=1.1e-27  Score=192.66  Aligned_cols=163  Identities=21%  Similarity=0.284  Sum_probs=125.5

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCc---CcccCcCCCcccchHHhh---
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK---QFAEEIQTRQYRAPEVIL---   76 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~---~~~~~~~~~~~~~PE~~~---   76 (237)
                      +++..+..++.|++.+|.|+|+.++.|+||||+||+++.++.++++|||++.....   ......++..|++||++.   
T Consensus       100 l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  179 (282)
T cd06643         100 LTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCET  179 (282)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEccCCCEEEccccccccccccccccccccccccccCHhhccccC
Confidence            57888999999999999999999999999999999999999999999998854332   223346788999999985   


Q ss_pred             --hcCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcc
Q 026540           77 --RAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRR  154 (237)
Q Consensus        77 --~~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (237)
                        ...++.++|+||+|++++++++|..||....      .......+...  ..                          
T Consensus       180 ~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~------~~~~~~~~~~~--~~--------------------------  225 (282)
T cd06643         180 SKDRPYDYKADVWSLGITLIEMAQIEPPHHELN------PMRVLLKIAKS--EP--------------------------  225 (282)
T ss_pred             CCCCCCCccchhhhHHHHHHHHccCCCCccccC------HHHHHHHHhhc--CC--------------------------
Confidence              2346788999999999999999999986542      11111111000  00                          


Q ss_pred             ccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccC
Q 026540          155 LKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNS  210 (237)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~  210 (237)
                                 .....+...+..+.+|+.+||+.||.+||+++++++||||+....
T Consensus       226 -----------~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~  270 (282)
T cd06643         226 -----------PTLAQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQHPFVTVNSN  270 (282)
T ss_pred             -----------CCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCCCEeccCC
Confidence                       000112234567899999999999999999999999999996544

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=99.95  E-value=1.4e-27  Score=189.11  Aligned_cols=158  Identities=25%  Similarity=0.323  Sum_probs=124.0

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC---cccCcCCCcccchHHhhhcC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ---FAEEIQTRQYRAPEVILRAG   79 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~~~~PE~~~~~~   79 (237)
                      +++..+..++.|++.+|.|+|..++.|+|++|+||+++.++.++|+|||++......   .....++..|++||.+.+..
T Consensus        96 l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~  175 (256)
T cd06612          96 LTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMAKRNTVIGTPFWMAPEVIQEIG  175 (256)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEECCCCcEEEcccccchhcccCccccccccCCccccCHHHHhcCC
Confidence            578899999999999999999999999999999999999999999999988654322   22345678899999998888


Q ss_pred             CCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCc
Q 026540           80 YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWS  159 (237)
Q Consensus        80 ~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (237)
                      ++.++|+||+|++++++++|..||....      ......   .....                                
T Consensus       176 ~~~~~Di~s~G~il~~l~~g~~p~~~~~------~~~~~~---~~~~~--------------------------------  214 (256)
T cd06612         176 YNNKADIWSLGITAIEMAEGKPPYSDIH------PMRAIF---MIPNK--------------------------------  214 (256)
T ss_pred             CCchhhHHHHHHHHHHHHhCCCCCCCcc------hhhhhh---hhccC--------------------------------
Confidence            8999999999999999999999986542      100000   00000                                


Q ss_pred             hhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCc
Q 026540          160 LDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL  205 (237)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f  205 (237)
                          .......+...+..+.+++.+||+.||.+|||++|+++||||
T Consensus       215 ----~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~~~~~  256 (256)
T cd06612         215 ----PPPTLSDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQHPFI  256 (256)
T ss_pred             ----CCCCCCchhhcCHHHHHHHHHHHhcChhhCcCHHHHhcCCCC
Confidence                000011122345678999999999999999999999999997

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=99.95  E-value=9.4e-28  Score=194.16  Aligned_cols=165  Identities=25%  Similarity=0.320  Sum_probs=127.8

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC---cccCcCCCcccchHHhhhcC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ---FAEEIQTRQYRAPEVILRAG   79 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~~~~PE~~~~~~   79 (237)
                      +++.++..++.|++.+|.|+|+.+++|+||||+||+++.++.++|+|||++......   .....++..|+|||.+.+..
T Consensus       115 l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  194 (292)
T cd06658         115 MNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKSLVGTPYWMAPEVISRLP  194 (292)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEccCcchhhcccccccCceeecCccccCHHHHccCC
Confidence            567889999999999999999999999999999999999999999999987543221   22345788999999998888


Q ss_pred             CCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCc
Q 026540           80 YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWS  159 (237)
Q Consensus        80 ~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (237)
                      ++.++|+||+|++++++++|..||....      .......+....   +.                             
T Consensus       195 ~~~~~Dv~slGvil~el~~g~~p~~~~~------~~~~~~~~~~~~---~~-----------------------------  236 (292)
T cd06658         195 YGTEVDIWSLGIMVIEMIDGEPPYFNEP------PLQAMRRIRDNL---PP-----------------------------  236 (292)
T ss_pred             CCchhhHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHhcC---CC-----------------------------
Confidence            8999999999999999999999987542      111111111000   00                             


Q ss_pred             hhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccCCc
Q 026540          160 LDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNSTR  212 (237)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~~~  212 (237)
                             ........+..+.+++.+||..||.+|||++++++||||.......
T Consensus       237 -------~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~~~~~~~~  282 (292)
T cd06658         237 -------RVKDSHKVSSVLRGFLDLMLVREPSQRATAQELLQHPFLKLAGPPS  282 (292)
T ss_pred             -------ccccccccCHHHHHHHHHHccCChhHCcCHHHHhhChhhhccCCcc
Confidence                   0000112356788999999999999999999999999999665443

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=99.95  E-value=2.7e-27  Score=190.36  Aligned_cols=187  Identities=27%  Similarity=0.341  Sum_probs=136.0

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC----cccCcCCCcccchHHhhh
Q 026540            2 TIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ----FAEEIQTRQYRAPEVILR   77 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~----~~~~~~~~~~~~PE~~~~   77 (237)
                      .+++.++..++.|++.||.|+|..++.|+||||+||+++.++.++++|||++......    .....++..|++||.+.+
T Consensus        96 ~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~  175 (287)
T cd07840          96 KFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILINNDGVLKLADFGLARPYTKRNSADYTNRVITLWYRPPELLLG  175 (287)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEEcCCCCEEEccccceeeccCCCcccccccccccccCCceeeEc
Confidence            3678899999999999999999999999999999999999999999999988655432    234456788999998765


Q ss_pred             c-CCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcccc
Q 026540           78 A-GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLK  156 (237)
Q Consensus        78 ~-~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (237)
                      . .++.++|+||+|++++++++|..||....      ....+..+.+..+.+....+....... +.....        .
T Consensus       176 ~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--------~  240 (287)
T cd07840         176 ATRYGPEVDMWSVGCILAELFLGKPIFQGST------ELEQLEKIFELCGSPTDENWPGVSKLP-WFENLK--------P  240 (287)
T ss_pred             cccCChHHHHHHHHHHHHHHHhCCCCCCCCC------hHHHHHHHHHHhCCCchhhccccccch-hhhhcc--------c
Confidence            4 57889999999999999999999997653      445555666665555443332211110 000000        0


Q ss_pred             CCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCc
Q 026540          157 FWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL  205 (237)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f  205 (237)
                      ...........  ....++..+.+++.+||..+|.+||+++++++||||
T Consensus       241 ~~~~~~~~~~~--~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~~~~  287 (287)
T cd07840         241 KKPYKRRLREF--FKHLIDPSALDLLDKLLTLDPKKRISADQALQHEYF  287 (287)
T ss_pred             cccchhHHHHH--hcccCCHHHHHHHHHHcCCChhhCcCHHHHhhCcCC
Confidence            00011111111  111246789999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=99.95  E-value=1.2e-27  Score=195.58  Aligned_cols=165  Identities=21%  Similarity=0.207  Sum_probs=128.2

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC-----------------------
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ-----------------------   59 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~-----------------------   59 (237)
                      +++..+..++.|++.+|.|+|..++.|+||||+||+++.++.++|+|||++......                       
T Consensus       100 l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (316)
T cd05574         100 LSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPPPVSKALRKGSRRSSVNSIPSE  179 (316)
T ss_pred             cCHHHHHHHHHHHHHHHHHHHHCCeeccCCChHHeEEcCCCCEEEeecchhhcccccccccccccccccccccccccchh
Confidence            577888999999999999999999999999999999999999999999987533211                       


Q ss_pred             ---------cccCcCCCcccchHHhhhcCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCH
Q 026540           60 ---------FAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPR  130 (237)
Q Consensus        60 ---------~~~~~~~~~~~~PE~~~~~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~  130 (237)
                               .....|+..|++||.+.+..++.++|+||+|++++++++|..||....      ....+..+   ..... 
T Consensus       180 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~------~~~~~~~~---~~~~~-  249 (316)
T cd05574         180 TFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSN------RDETFSNI---LKKEV-  249 (316)
T ss_pred             hhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCc------hHHHHHHH---hcCCc-
Confidence                     112356788999999988888999999999999999999999997553      11111111   00000 


Q ss_pred             HHHhcCCCchhhhcccCccchhccccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCC----HHHHhcCCCcC
Q 026540          131 KIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPT----AQQCLQHPWLS  206 (237)
Q Consensus       131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t----~~ell~hp~f~  206 (237)
                                                          ........+..+.+++.+||..||++|||    ++|+++||||.
T Consensus       250 ------------------------------------~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~~~~~  293 (316)
T cd05574         250 ------------------------------------TFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQHPFFR  293 (316)
T ss_pred             ------------------------------------cCCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcCchhh
Confidence                                                00001114678999999999999999999    99999999999


Q ss_pred             cccCCcc
Q 026540          207 LRNSTRD  213 (237)
Q Consensus       207 ~~~~~~~  213 (237)
                      +..+...
T Consensus       294 ~~~~~~~  300 (316)
T cd05574         294 GVNWALI  300 (316)
T ss_pred             cCChhhc
Confidence            7665443

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]

Probab=99.95  E-value=2.5e-28  Score=202.68  Aligned_cols=155  Identities=24%  Similarity=0.246  Sum_probs=127.5

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC--cccCcCCCcccchHHhhhcCC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ--FAEEIQTRQYRAPEVILRAGY   80 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~--~~~~~~~~~~~~PE~~~~~~~   80 (237)
                      +.....+.-.++|+.|++|||.+.|+|||||.-||||..+..+||+|||-++.....  .-.+.||..|||||++...+.
T Consensus       209 itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~STkMSFaGTVaWMAPEvIrnePc  288 (904)
T KOG4721|consen  209 ITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILISYDDVVKISDFGTSKELSDKSTKMSFAGTVAWMAPEVIRNEPC  288 (904)
T ss_pred             cCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEeeccceEEeccccchHhhhhhhhhhhhhhhHhhhCHHHhhcCCc
Confidence            456778888999999999999999999999999999999999999999988665433  225688999999999999999


Q ss_pred             CchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCch
Q 026540           81 SFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSL  160 (237)
Q Consensus        81 ~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (237)
                      +.++|||||||++|+|+||..||.+-.         +.+-                        .++.-.+.       +
T Consensus       289 sEKVDIwSfGVVLWEmLT~EiPYkdVd---------ssAI------------------------IwGVGsNs-------L  328 (904)
T KOG4721|consen  289 SEKVDIWSFGVVLWEMLTGEIPYKDVD---------SSAI------------------------IWGVGSNS-------L  328 (904)
T ss_pred             ccccceehhHHHHHHHHhcCCCccccc---------hhee------------------------EEeccCCc-------c
Confidence            999999999999999999999996542         1110                        01100000       0


Q ss_pred             hHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCC
Q 026540          161 DRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHP  203 (237)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp  203 (237)
                            ...++..+++.|.=|++.||+-.|..||++.|++.|=
T Consensus       329 ------~LpvPstcP~GfklL~Kqcw~sKpRNRPSFrqil~Hl  365 (904)
T KOG4721|consen  329 ------HLPVPSTCPDGFKLLLKQCWNSKPRNRPSFRQILLHL  365 (904)
T ss_pred             ------cccCcccCchHHHHHHHHHHhcCCCCCccHHHHHHHH
Confidence                  2346788899999999999999999999999999983

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=99.95  E-value=2.1e-27  Score=192.68  Aligned_cols=186  Identities=23%  Similarity=0.277  Sum_probs=135.9

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC----cccCcCCCcccchHHhhh
Q 026540            2 TIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ----FAEEIQTRQYRAPEVILR   77 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~----~~~~~~~~~~~~PE~~~~   77 (237)
                      .+++.++..++.|++.||.|+|..+++|+|+||+||+++.++.++|+|||.+......    .....++..|++||.+.+
T Consensus       112 ~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~  191 (302)
T cd07864         112 HFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILLNNKGQIKLADFGLARLYNSEESRPYTNKVITLWYRPPELLLG  191 (302)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCcEEeCcccccccccCCcccccccceeccCccChHHhcC
Confidence            3678899999999999999999999999999999999999999999999988654321    222345678999998875


Q ss_pred             c-CCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcccc
Q 026540           78 A-GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLK  156 (237)
Q Consensus        78 ~-~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (237)
                      . .++.++|+||+|++++++++|+.||...      .....+..+.+..+......++.......+........      
T Consensus       192 ~~~~~~~~Di~slG~~~~el~~g~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------  259 (302)
T cd07864         192 EERYGPAIDVWSCGCILGELFTKKPIFQAN------QELAQLELISRLCGSPCPAVWPDVIKLPYFNTMKPKKQ------  259 (302)
T ss_pred             CCCCCchhHHHHHHHHHHHHHhCCCCCCCC------ChHHHHHHHHHHhCCCChhhcccccccccccccccccc------
Confidence            4 4688999999999999999999999754      35566667777666555443322211111110000000      


Q ss_pred             CCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCc
Q 026540          157 FWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL  205 (237)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f  205 (237)
                         ..+...   ......+..+.+++.+||+.+|.+|||++++++||||
T Consensus       260 ---~~~~~~---~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~  302 (302)
T cd07864         260 ---YRRRLR---EEFSFIPTPALDLLDHMLTLDPSKRCTAEEALNSPWL  302 (302)
T ss_pred             ---cccchh---hhcCCCCHHHHHHHHHHccCChhhCCCHHHHhcCCCC
Confidence               000000   0011236778999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>PHA02988 hypothetical protein; Provisional

Probab=99.95  E-value=2e-27  Score=191.38  Aligned_cols=153  Identities=12%  Similarity=0.106  Sum_probs=121.4

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhh-cCCccCCCCCccccCCCCcEEEeecCcceecCcCcccCcCCCcccchHHhhh--cC
Q 026540            3 IVEKKLKRRAKRAVANISIRRAS-MGGIELPKPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILR--AG   79 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~-~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~PE~~~~--~~   79 (237)
                      +++.....++.+++.||.|+|.. ++.||||||+||+++.++.+|++|||++...........++..|+|||.+.+  ..
T Consensus       119 ~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  198 (283)
T PHA02988        119 LSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVTENYKLKIICHGLEKILSSPPFKNVNFMVYFSYKMLNDIFSE  198 (283)
T ss_pred             CChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEECCCCcEEEcccchHhhhccccccccCcccccCHHHhhhcccc
Confidence            56778899999999999999985 8889999999999999999999999998765544445677889999999986  57


Q ss_pred             CCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCc
Q 026540           80 YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWS  159 (237)
Q Consensus        80 ~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (237)
                      ++.++|+||+|+++|++++|..||...+      ..+....+....                                  
T Consensus       199 ~~~k~Di~SlGvil~el~~g~~Pf~~~~------~~~~~~~i~~~~----------------------------------  238 (283)
T PHA02988        199 YTIKDDIYSLGVVLWEIFTGKIPFENLT------TKEIYDLIINKN----------------------------------  238 (283)
T ss_pred             ccchhhhhHHHHHHHHHHHCCCCCCCCC------HHHHHHHHHhcC----------------------------------
Confidence            8999999999999999999999997542      111111111000                                  


Q ss_pred             hhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhc
Q 026540          160 LDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ  201 (237)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  201 (237)
                            .....+..++..+.+|+.+||+.||.+|||++++++
T Consensus       239 ------~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~  274 (283)
T PHA02988        239 ------NSLKLPLDCPLEIKCIVEACTSHDSIKRPNIKEILY  274 (283)
T ss_pred             ------CCCCCCCcCcHHHHHHHHHHhcCCcccCcCHHHHHH
Confidence                  001122235678999999999999999999999985

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=99.95  E-value=1e-27  Score=193.69  Aligned_cols=163  Identities=24%  Similarity=0.272  Sum_probs=132.0

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcCcccCcCCCcccchHHhhhcCCCc
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSF   82 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~   82 (237)
                      +++..+..++.|++.+|.|+|..+++|+||+|+||+++.++.++|+|||++...........+++.|++||.+.+..++.
T Consensus        98 l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  177 (290)
T cd05580          98 FPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGRTYTLCGTPEYLAPEIILSKGYGK  177 (290)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEEeeCCCccccCCCCCCCCCCccccChhhhcCCCCCc
Confidence            67888999999999999999999999999999999999999999999999876554444556788999999998888889


Q ss_pred             hhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCchhH
Q 026540           83 SVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDR  162 (237)
Q Consensus        83 ~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (237)
                      ++|+||+|++++++++|..||....      .......+.                                        
T Consensus       178 ~~Di~slG~il~~l~~g~~p~~~~~------~~~~~~~~~----------------------------------------  211 (290)
T cd05580         178 AVDWWALGILIYEMLAGYPPFFDDN------PIQIYEKIL----------------------------------------  211 (290)
T ss_pred             cccHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHh----------------------------------------
Confidence            9999999999999999999986542      111111110                                        


Q ss_pred             HhhhhcCCCHHhHHHHHHHHHhccccCCCCCC-----CHHHHhcCCCcCcccCCcc
Q 026540          163 LLVDKYRFSETDAREFAEFLVPLLDFTPEKRP-----TAQQCLQHPWLSLRNSTRD  213 (237)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~-----t~~ell~hp~f~~~~~~~~  213 (237)
                        ......+...+..+.+++.+||..||.+|+     +++++++||||....+...
T Consensus       212 --~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~~~~~  265 (290)
T cd05580         212 --EGKVRFPSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNHPWFAGIDWIAL  265 (290)
T ss_pred             --cCCccCCccCCHHHHHHHHHHccCCHHHccCcccCCHHHHHcCcccccCCHHHH
Confidence              011122333467888999999999999999     8999999999998765443

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=99.95  E-value=3.9e-27  Score=189.62  Aligned_cols=187  Identities=22%  Similarity=0.314  Sum_probs=133.4

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCc---CcccCcCCCcccchHHhhhc
Q 026540            2 TIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK---QFAEEIQTRQYRAPEVILRA   78 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~---~~~~~~~~~~~~~PE~~~~~   78 (237)
                      ++++.++..++.|++.+|.|+|..++.|+|++|+||+++.++.++++|||++.....   ......++..|++||.+.+.
T Consensus        96 ~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  175 (286)
T cd07846          96 GLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYTDYVATRWYRAPELLVGD  175 (286)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCcEEEEeeeeeeeccCCccccCcccceeeccCcHHhccc
Confidence            367889999999999999999999999999999999999999999999998864322   22234567889999998764


Q ss_pred             -CCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccC
Q 026540           79 -GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKF  157 (237)
Q Consensus        79 -~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (237)
                       .++.++|+||+|++++++++|..||....      ..+....+.+..+........       .+........... ..
T Consensus       176 ~~~~~~~Dv~slG~~l~el~~g~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~-~~  241 (286)
T cd07846         176 TKYGRAVDIWAVGCLVTEMLTGEPLFPGDS------DIDQLYHIIKCLGNLIPRHQE-------IFQKNPLFAGMRL-PE  241 (286)
T ss_pred             cccCchHhHHHHHHHHHHHHcCCCCCCCCc------hHHHHHHHHHHhCCCchhhHH-------HhccchHhhcccc-cc
Confidence             46788999999999999999998886542      445555555555544332211       1110000000000 00


Q ss_pred             CchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCc
Q 026540          158 WSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL  205 (237)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f  205 (237)
                      ....   ..........+..+.+|+.+||+.+|.+||++.++++||||
T Consensus       242 ~~~~---~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~  286 (286)
T cd07846         242 VKEI---EPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHHEFF  286 (286)
T ss_pred             ccCc---chHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcCCCC
Confidence            0000   00001123456789999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=99.95  E-value=1.9e-27  Score=192.74  Aligned_cols=162  Identities=26%  Similarity=0.386  Sum_probs=127.3

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC---cccCcCCCcccchHHhhhcC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ---FAEEIQTRQYRAPEVILRAG   79 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~~~~PE~~~~~~   79 (237)
                      +++.++..++.+++.+++++|+.++.|+||||+||+++.++.++|+|||++......   .....++..|++||.+.+..
T Consensus       112 l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  191 (296)
T cd06655         112 MDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKA  191 (296)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccchhcccccccCCCcCCCccccCcchhcCCC
Confidence            578899999999999999999999999999999999999999999999987543321   22335678899999998888


Q ss_pred             CCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCc
Q 026540           80 YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWS  159 (237)
Q Consensus        80 ~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (237)
                      ++.++|+||+|++++++++|..||....      .......+.. .+.                                
T Consensus       192 ~~~~~Dv~slGvil~~lltg~~pf~~~~------~~~~~~~~~~-~~~--------------------------------  232 (296)
T cd06655         192 YGPKVDIWSLGIMAIEMVEGEPPYLNEN------PLRALYLIAT-NGT--------------------------------  232 (296)
T ss_pred             CCchhhHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHh-cCC--------------------------------
Confidence            8999999999999999999999997652      1111111100 000                                


Q ss_pred             hhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCccc
Q 026540          160 LDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRN  209 (237)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~  209 (237)
                            .....+...+..+.+||.+||..||.+|||+.++++||||....
T Consensus       233 ------~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~~~~~~~~~  276 (296)
T cd06655         233 ------PELQNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQHPFLKLAK  276 (296)
T ss_pred             ------cccCCcccCCHHHHHHHHHHhhcChhhCCCHHHHhhChHhhhcc
Confidence                  00111233466788999999999999999999999999998654

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=99.95  E-value=1.7e-27  Score=192.96  Aligned_cols=163  Identities=25%  Similarity=0.358  Sum_probs=126.9

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCc---CcccCcCCCcccchHHhhhcC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK---QFAEEIQTRQYRAPEVILRAG   79 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~---~~~~~~~~~~~~~PE~~~~~~   79 (237)
                      +++.++..++.|++.+|.|+|..++.|+||||+||+++.++.++|+|||++.....   ......+++.|++||.+.+..
T Consensus       113 ~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  192 (296)
T cd06654         113 MDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKA  192 (296)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCEEECccccchhccccccccCcccCCccccCHHHHcCCC
Confidence            46778899999999999999999999999999999999999999999998754322   122346788999999998888


Q ss_pred             CCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCc
Q 026540           80 YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWS  159 (237)
Q Consensus        80 ~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (237)
                      ++.++|+||+|++++++++|+.||....      ....+..... .+..                               
T Consensus       193 ~~~~~Dv~s~Gvil~~l~~g~~pf~~~~------~~~~~~~~~~-~~~~-------------------------------  234 (296)
T cd06654         193 YGPKVDIWSLGIMAIEMIEGEPPYLNEN------PLRALYLIAT-NGTP-------------------------------  234 (296)
T ss_pred             CCccchHHHHHHHHHHHHhCCCCCCCCC------HHHhHHHHhc-CCCC-------------------------------
Confidence            8999999999999999999999997543      1111110000 0000                               


Q ss_pred             hhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccC
Q 026540          160 LDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNS  210 (237)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~  210 (237)
                             ....+...+..+.+++.+||..+|++|||++++++||||.....
T Consensus       235 -------~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~~~~~~~~~  278 (296)
T cd06654         235 -------ELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLKIAKP  278 (296)
T ss_pred             -------CCCCccccCHHHHHHHHHHCcCCcccCcCHHHHhhChhhhccCC
Confidence                   00112234567889999999999999999999999999986543

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=99.95  E-value=1.5e-27  Score=196.26  Aligned_cols=165  Identities=16%  Similarity=0.216  Sum_probs=123.7

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcCc----ccCcCCCcccchHHhhh-
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQF----AEEIQTRQYRAPEVILR-   77 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~~----~~~~~~~~~~~PE~~~~-   77 (237)
                      +++..+..++.|++.||+|+|..+++||||||+||+++.++.++|+|||++.......    ....|++.|+|||++.+ 
T Consensus        99 l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  178 (331)
T cd05624          99 LPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDGTVQSSVAVGTPDYISPEILQAM  178 (331)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHEEEcCCCCEEEEeccceeeccCCCceeeccccCCcccCCHHHHhcc
Confidence            5788899999999999999999999999999999999999999999999986544221    23468999999999875 


Q ss_pred             ----cCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhc
Q 026540           78 ----AGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIR  153 (237)
Q Consensus        78 ----~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (237)
                          ..++.++|+||+|++++++++|+.||....      .......+......+                         
T Consensus       179 ~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~------~~~~~~~i~~~~~~~-------------------------  227 (331)
T cd05624         179 EDGMGKYGPECDWWSLGVCMYEMLYGETPFYAES------LVETYGKIMNHEERF-------------------------  227 (331)
T ss_pred             ccCCCCCCCcccEEeeehhhhhhhhCCCCccCCC------HHHHHHHHHcCCCcc-------------------------
Confidence                457889999999999999999999997542      111111111000000                         


Q ss_pred             cccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCC--CCCHHHHhcCCCcCcccC
Q 026540          154 RLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEK--RPTAQQCLQHPWLSLRNS  210 (237)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~--R~t~~ell~hp~f~~~~~  210 (237)
                           +.       .......+..+.+++.+||..++.+  |++++++++|+||...++
T Consensus       228 -----~~-------p~~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h~~f~~~~~  274 (331)
T cd05624         228 -----QF-------PSHITDVSEEAKDLIQRLICSRERRLGQNGIEDFKKHAFFEGIDW  274 (331)
T ss_pred             -----cC-------CCccccCCHHHHHHHHHHccCchhhcCCCCHHHHhcCCCcCCCCH
Confidence                 00       0001123678889999999865544  468999999999987654

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=99.95  E-value=2.6e-27  Score=188.86  Aligned_cols=156  Identities=21%  Similarity=0.302  Sum_probs=123.8

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC---------cccCcCCCcccchH
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ---------FAEEIQTRQYRAPE   73 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~---------~~~~~~~~~~~~PE   73 (237)
                      +++..+..++.|++.++.++|..+++|+||+|+||+++.++.++|+|||.+......         .....++..|++||
T Consensus       103 l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~y~~pe  182 (267)
T cd06628         103 FEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILVDNKGGIKISDFGISKKLEANSLSTKTNGARPSLQGSVFWMAPE  182 (267)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHEEEcCCCCEEecccCCCcccccccccCCccccccccCCCcCccChh
Confidence            567888999999999999999999999999999999999999999999987654311         11234678899999


Q ss_pred             HhhhcCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhc
Q 026540           74 VILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIR  153 (237)
Q Consensus        74 ~~~~~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (237)
                      .+.+..++.++|+||+|++++++++|..||....      .   ...+......                          
T Consensus       183 ~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~------~---~~~~~~~~~~--------------------------  227 (267)
T cd06628         183 VVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCT------Q---LQAIFKIGEN--------------------------  227 (267)
T ss_pred             HhccCCCCchhhhHHHHHHHHHHhhCCCCCCCcc------H---HHHHHHHhcc--------------------------
Confidence            9988888999999999999999999999997542      1   1111111000                          


Q ss_pred             cccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCc
Q 026540          154 RLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL  205 (237)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f  205 (237)
                                  .....+...+..+.+++.+||+.||.+||++.++++||||
T Consensus       228 ------------~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~  267 (267)
T cd06628         228 ------------ASPEIPSNISSEAIDFLEKTFEIDHNKRPTAAELLKHPFL  267 (267)
T ss_pred             ------------CCCcCCcccCHHHHHHHHHHccCCchhCcCHHHHhhCCCC
Confidence                        0011223346788899999999999999999999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.95  E-value=5.4e-28  Score=215.73  Aligned_cols=161  Identities=25%  Similarity=0.272  Sum_probs=132.1

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC-------cccCcCCCcccchHHh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ-------FAEEIQTRQYRAPEVI   75 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~-------~~~~~~~~~~~~PE~~   75 (237)
                      ..|.-..-|-.|+++|++|||..||+||||||.||+++.+|.+|++|||.|.....+       ....+||+.|||||++
T Consensus      1331 ~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~~~~~~el~~~~GT~~YMAPEvi 1410 (1509)
T KOG4645|consen 1331 EDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNAQTMPGELQSMMGTPMYMAPEVI 1410 (1509)
T ss_pred             hhhhHHHHHHHHHHHHHHHHHhcCceecCCCccceeeecCCcEEeecccceeEecCchhcCCHHHHhhcCCchhcCchhh
Confidence            345666788999999999999999999999999999999999999999999655433       2355899999999999


Q ss_pred             hhc---CCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchh
Q 026540           76 LRA---GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRI  152 (237)
Q Consensus        76 ~~~---~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (237)
                      .+.   +...++||||+||++.||++|+.||...      +++.++...+..-.                          
T Consensus      1411 t~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~------dne~aIMy~V~~gh-------------------------- 1458 (1509)
T KOG4645|consen 1411 TGTKGKGHGGAADIWSLGCVVLEMATGKRPWAEL------DNEWAIMYHVAAGH-------------------------- 1458 (1509)
T ss_pred             cccccCCCCcchhhhcccceEEEeecCCCchhhc------cchhHHHhHHhccC--------------------------
Confidence            865   4677899999999999999999999755      34444443322211                          


Q ss_pred             ccccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCccc
Q 026540          153 RRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRN  209 (237)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~  209 (237)
                                    ..+.|..++.+..+||..||+-||++|.++.|+++|-|-+...
T Consensus      1459 --------------~Pq~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~~f~~~~~ 1501 (1509)
T KOG4645|consen 1459 --------------KPQIPERLSSEGRDFLEHCLEQDPKMRWTASQLLEHAFGKSCT 1501 (1509)
T ss_pred             --------------CCCCchhhhHhHHHHHHHHHhcCchhhhHHHHHHHhhcccccc
Confidence                          1234556789999999999999999999999999999988654

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=99.95  E-value=3e-27  Score=188.05  Aligned_cols=164  Identities=26%  Similarity=0.314  Sum_probs=129.0

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC--cccCcCCCcccchHHhhhcCC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ--FAEEIQTRQYRAPEVILRAGY   80 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~--~~~~~~~~~~~~PE~~~~~~~   80 (237)
                      +++..+..++.|++.+|.|+|+.+++|+||+|+||+++.++.++++|||++......  .....++..|++||.+....+
T Consensus        90 l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~  169 (262)
T cd05572          90 FDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQKTWTFCGTPEYVAPEIILNKGY  169 (262)
T ss_pred             CCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEEcCCCCEEEeeCCcccccCcccccccccCCcCccChhHhcCCCC
Confidence            567889999999999999999999999999999999999999999999988654432  223466888999999888888


Q ss_pred             CchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCch
Q 026540           81 SFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSL  160 (237)
Q Consensus        81 ~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (237)
                      +.++|+||+|++++++++|..||.....       +...........                                 
T Consensus       170 ~~~~Di~slG~il~~l~~g~~p~~~~~~-------~~~~~~~~~~~~---------------------------------  209 (262)
T cd05572         170 DFSVDYWSLGILLYELLTGRPPFGEDDE-------DPMEIYNDILKG---------------------------------  209 (262)
T ss_pred             CChhhhhhhHHHHHHHHhCCCCcCCCCC-------CHHHHHHHHhcc---------------------------------
Confidence            9999999999999999999999975421       011111111000                                 


Q ss_pred             hHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCC-----HHHHhcCCCcCcccC
Q 026540          161 DRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPT-----AQQCLQHPWLSLRNS  210 (237)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t-----~~ell~hp~f~~~~~  210 (237)
                          ......+...+..+.+++.+||..+|.+|++     ++|+++||||+..++
T Consensus       210 ----~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~~  260 (262)
T cd05572         210 ----NGKLEFPNYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKKHKWFNGFDW  260 (262)
T ss_pred             ----CCCCCCCcccCHHHHHHHHHHccCChhhCcCCcccCHHHHhcChhhhCCCC
Confidence                0011123333678899999999999999999     999999999997754

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=99.95  E-value=7.4e-28  Score=197.82  Aligned_cols=201  Identities=16%  Similarity=0.143  Sum_probs=127.6

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCc---Cc-------ccCcCCCcccc
Q 026540            2 TIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK---QF-------AEEIQTRQYRA   71 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~---~~-------~~~~~~~~~~~   71 (237)
                      ++++..+..++.|++.||.|+|..+++||||||+||+++.++.++++||+.......   ..       ....++..|++
T Consensus        97 ~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~a  176 (328)
T cd08226          97 GMSEALIGNILFGALRGLNYLHQNGYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAKVVYDFPQFSTSVLPWLS  176 (328)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCccccccccccccccCccCccC
Confidence            367888899999999999999999999999999999999999999999975422111   00       01123557999


Q ss_pred             hHHhhhc--CCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCH-HHHh--cCCCchhhhccc
Q 026540           72 PEVILRA--GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPR-KIAI--GGAQSKDYFDRH  146 (237)
Q Consensus        72 PE~~~~~--~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~  146 (237)
                      ||++.+.  .++.++|+||+|++++++++|..||....      ..   ......+...+. ....  .......+....
T Consensus       177 PE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~------~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (328)
T cd08226         177 PELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDML------RT---QMLLQKLKGPPYSPLDITTFPCEESRMKNSQ  247 (328)
T ss_pred             hhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcC------hH---HHHHHHhcCCCCCCccccccchhhhhhccch
Confidence            9999764  47889999999999999999999997542      11   112222211110 0000  000000000000


Q ss_pred             Cccch--hccccC---CchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccCC
Q 026540          147 GDLKR--IRRLKF---WSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNST  211 (237)
Q Consensus       147 ~~~~~--~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~~  211 (237)
                      .....  ......   ................++..+.+|+.+||++||++|||++|+++||||......
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~~~~~~~~  317 (328)
T cd08226         248 SGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHAFFKQVKEQ  317 (328)
T ss_pred             hhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCHHHHHHHHh
Confidence            00000  000000   000000000111234567889999999999999999999999999999977654

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=99.95  E-value=2.2e-27  Score=191.88  Aligned_cols=166  Identities=25%  Similarity=0.344  Sum_probs=127.3

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCc---CcccCcCCCcccchHHhhh--
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK---QFAEEIQTRQYRAPEVILR--   77 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~---~~~~~~~~~~~~~PE~~~~--   77 (237)
                      +++.++..++.|++.+|.|+|..++.|+|+||+||+++.++.++|+|||.+.....   ......++..|++||.+.+  
T Consensus       107 l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  186 (292)
T cd06644         107 LTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTLQRRDSFIGTPYWMAPEVVMCET  186 (292)
T ss_pred             CCHHHHHHHHHHHHHHHHHHhcCCeeecCCCcceEEEcCCCCEEEccCccceeccccccccceecCCccccCceeecccc
Confidence            67889999999999999999999999999999999999999999999998754322   1233456789999999853  


Q ss_pred             ---cCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcc
Q 026540           78 ---AGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRR  154 (237)
Q Consensus        78 ---~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (237)
                         ..++.++|+||+|+++|++++|..||....      .....   .......+                         
T Consensus       187 ~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~------~~~~~---~~~~~~~~-------------------------  232 (292)
T cd06644         187 MKDTPYDYKADIWSLGITLIEMAQIEPPHHELN------PMRVL---LKIAKSEP-------------------------  232 (292)
T ss_pred             ccCCCCCchhhhHhHHHHHHHHhcCCCCCcccc------HHHHH---HHHhcCCC-------------------------
Confidence               346788999999999999999999986542      11111   11110000                         


Q ss_pred             ccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccCCcc
Q 026540          155 LKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNSTRD  213 (237)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~~~~  213 (237)
                                 .....+...+..+.+++.+||+.+|++||+++++++||||......++
T Consensus       233 -----------~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~~~~  280 (292)
T cd06644         233 -----------PTLSQPSKWSMEFRDFLKTALDKHPETRPSAAQLLEHPFVSSVTSNRP  280 (292)
T ss_pred             -----------ccCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHhcCccccccccchh
Confidence                       000112234567889999999999999999999999999998776553

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=99.95  E-value=1.4e-27  Score=191.95  Aligned_cols=157  Identities=24%  Similarity=0.299  Sum_probs=121.2

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCc---CcccCcCCCcccchHHhhh--
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK---QFAEEIQTRQYRAPEVILR--   77 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~---~~~~~~~~~~~~~PE~~~~--   77 (237)
                      +++..+..++.|+++++.|+|..+++|+|+||+||+++.++.++|+|||.+.....   ......++..|+|||.+..  
T Consensus       118 ~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~  197 (282)
T cd06636         118 LKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDE  197 (282)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCcchhhhhccccCCCcccccccccCHhhcCccc
Confidence            56788899999999999999999999999999999999999999999998754322   2233467889999999863  


Q ss_pred             ---cCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcc
Q 026540           78 ---AGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRR  154 (237)
Q Consensus        78 ---~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (237)
                         ..++.++|+||+|++++++++|..||....      ..   ..........+                         
T Consensus       198 ~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~------~~---~~~~~~~~~~~-------------------------  243 (282)
T cd06636         198 NPDATYDYRSDIWSLGITAIEMAEGAPPLCDMH------PM---RALFLIPRNPP-------------------------  243 (282)
T ss_pred             CcCcCCCcccchhHHHHHHHHHHhCCCCccccC------HH---hhhhhHhhCCC-------------------------
Confidence               347788999999999999999999996542      10   10000000000                         


Q ss_pred             ccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCc
Q 026540          155 LKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL  205 (237)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f  205 (237)
                                  ........+..+.+||.+||..||.+|||+.|+++||||
T Consensus       244 ------------~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~~~~~  282 (282)
T cd06636         244 ------------PKLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLKHPFI  282 (282)
T ss_pred             ------------CCCcccccCHHHHHHHHHHhCCChhhCcCHHHHhcCCCC
Confidence                        000112345688999999999999999999999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>PHA02882 putative serine/threonine kinase; Provisional

Probab=99.95  E-value=4.9e-27  Score=190.14  Aligned_cols=157  Identities=15%  Similarity=0.098  Sum_probs=118.9

Q ss_pred             hHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCc----------CcccCcCCCcccchH
Q 026540            4 VEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK----------QFAEEIQTRQYRAPE   73 (237)
Q Consensus         4 ~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~----------~~~~~~~~~~~~~PE   73 (237)
                      ++..+..++.|++.||.|+|..+++||||||+|||++.++.++|+|||++.....          ......|++.|+|||
T Consensus       124 ~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nill~~~~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape  203 (294)
T PHA02882        124 NKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIMVDGNNRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLD  203 (294)
T ss_pred             CHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCcEEEEEcCCceeeccCCcccccccccccccCCCccccCHH
Confidence            5677889999999999999999999999999999999999999999999865421          112236889999999


Q ss_pred             HhhhcCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHH-HHHHCCCCHHHHhcCCCchhhhcccCccchh
Q 026540           74 VILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALM-MELIGKMPRKIAIGGAQSKDYFDRHGDLKRI  152 (237)
Q Consensus        74 ~~~~~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (237)
                      ...+..++.++|+||+|++++++++|..||.....     ........ ....                           
T Consensus       204 ~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~-----~~~~~~~~~~~~~---------------------------  251 (294)
T PHA02882        204 AHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGH-----NGNLIHAAKCDFI---------------------------  251 (294)
T ss_pred             HhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCcccc-----chHHHHHhHHHHH---------------------------
Confidence            99888899999999999999999999999976531     11111000 0000                           


Q ss_pred             ccccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhc
Q 026540          153 RRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ  201 (237)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  201 (237)
                              .++..... ....+++.+.+++..|+..+|++||++.++++
T Consensus       252 --------~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~  291 (294)
T PHA02882        252 --------KRLHEGKI-KIKNANKFIYDFIECVTKLSYEEKPDYDALIK  291 (294)
T ss_pred             --------HHhhhhhh-ccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHH
Confidence                    00000000 11234677899999999999999999999875

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=99.95  E-value=2.3e-27  Score=188.53  Aligned_cols=163  Identities=23%  Similarity=0.227  Sum_probs=126.6

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcCcccCcCCCcccchHHhhhcCCCc
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSF   82 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~   82 (237)
                      +++.++..++.|++.||.|+|..++.|+||+|+||+++.++.++++|||++..... .....++..|++||.+.+..++.
T Consensus        94 ~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~-~~~~~~~~~y~~pe~~~~~~~~~  172 (260)
T cd05611          94 LPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE-NKKFVGTPDYLAPETILGVGDDK  172 (260)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEeecccceeccc-cccCCCCcCccChhhhcCCCCcc
Confidence            57888999999999999999999999999999999999999999999998765332 22345678899999998877889


Q ss_pred             hhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCchhH
Q 026540           83 SVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDR  162 (237)
Q Consensus        83 ~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (237)
                      ++|+||+|++++++++|..||....      .......+....  .                                  
T Consensus       173 ~~Dv~slG~il~~l~~g~~p~~~~~------~~~~~~~~~~~~--~----------------------------------  210 (260)
T cd05611         173 MSDWWSLGCVIFEFLFGYPPFHAET------PDAVFDNILSRR--I----------------------------------  210 (260)
T ss_pred             hhhhHHHHHHHHHHHHCCCCCCCCC------HHHHHHHHHhcc--c----------------------------------
Confidence            9999999999999999999996542      111111110000  0                                  


Q ss_pred             HhhhhcCCCHHhHHHHHHHHHhccccCCCCCCC---HHHHhcCCCcCcccC
Q 026540          163 LLVDKYRFSETDAREFAEFLVPLLDFTPEKRPT---AQQCLQHPWLSLRNS  210 (237)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t---~~ell~hp~f~~~~~  210 (237)
                        .........++..+.+++.+||+.+|.+||+   ++|++.||||+..++
T Consensus       211 --~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l~~~~~~~~~~  259 (260)
T cd05611         211 --NWPEEVKEFCSPEAVDLINRLLCMDPAKRLGANGYQEIKSHPFFKSINW  259 (260)
T ss_pred             --CCCCcccccCCHHHHHHHHHHccCCHHHccCCCcHHHHHcChHhhcCCC
Confidence              0000011234678899999999999999995   579999999987654

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.94  E-value=2.4e-27  Score=195.98  Aligned_cols=157  Identities=22%  Similarity=0.305  Sum_probs=120.0

Q ss_pred             HHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC-----cccCcCCCcccchHHhhhcC--
Q 026540            7 KLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ-----FAEEIQTRQYRAPEVILRAG--   79 (237)
Q Consensus         7 ~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~-----~~~~~~~~~~~~PE~~~~~~--   79 (237)
                      -.+.|-.|+|.+++++|..+|+|.||||.|+|+-. |.+||+|||+|......     ....+||..||+||.+....  
T Consensus       461 ~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLlVk-G~LKLIDFGIA~aI~~DTTsI~kdsQvGT~NYMsPEAl~~~~s~  539 (677)
T KOG0596|consen  461 FLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLLVK-GRLKLIDFGIANAIQPDTTSIVKDSQVGTVNYMSPEALTDMSSS  539 (677)
T ss_pred             HHHHHHHHHHHHHHHHHHhceeecCCCcccEEEEe-eeEEeeeechhcccCccccceeeccccCcccccCHHHHhhcccc
Confidence            45678899999999999999999999999987754 57999999998654322     23568999999999998432  


Q ss_pred             ---------CCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccc
Q 026540           80 ---------YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLK  150 (237)
Q Consensus        80 ---------~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (237)
                               .++++||||+||++|+|+.|+.||...        ...++.+..+..+-..                    
T Consensus       540 ~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~--------~n~~aKl~aI~~P~~~--------------------  591 (677)
T KOG0596|consen  540 RENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQI--------INQIAKLHAITDPNHE--------------------  591 (677)
T ss_pred             ccCCCcceeecCccchhhhhhHHHHHHhcCCchHHH--------HHHHHHHHhhcCCCcc--------------------
Confidence                     568899999999999999999999632        1244444444322100                    


Q ss_pred             hhccccCCchhHHhhhhcCCCHH-hHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCccc
Q 026540          151 RIRRLKFWSLDRLLVDKYRFSET-DAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRN  209 (237)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~  209 (237)
                                       ..++.. ...++++++..||.+||.+|||+.++|+|||+....
T Consensus       592 -----------------Iefp~~~~~~~li~~mK~CL~rdPkkR~si~eLLqhpFl~~~~  634 (677)
T KOG0596|consen  592 -----------------IEFPDIPENDELIDVMKCCLARDPKKRWSIPELLQHPFLQIQP  634 (677)
T ss_pred             -----------------ccccCCCCchHHHHHHHHHHhcCcccCCCcHHHhcCccccccc
Confidence                             001111 123488999999999999999999999999999754

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=99.94  E-value=2.8e-27  Score=195.09  Aligned_cols=194  Identities=26%  Similarity=0.369  Sum_probs=139.6

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCc--------CcccCcCCCcccchHH
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK--------QFAEEIQTRQYRAPEV   74 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~--------~~~~~~~~~~~~~PE~   74 (237)
                      +++.++..++.|++.+|.|+|..++.|+||||+||+++.++.++|+|||++.....        ......++..|++||.
T Consensus       104 ~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~p~nill~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~  183 (337)
T cd07852         104 LEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILLNSDCRVKLADFGLARSLSELEENPENPVLTDYVATRWYRAPEI  183 (337)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccchhccccccccccCcchhcccccccccCcee
Confidence            46677888999999999999999999999999999999999999999998854321        1123457888999998


Q ss_pred             hhhc-CCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCC--chhhhcccCccch
Q 026540           75 ILRA-GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQ--SKDYFDRHGDLKR  151 (237)
Q Consensus        75 ~~~~-~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~  151 (237)
                      +.+. .++.++|+||+|++++++++|+.||.+.      ........+....+.++.........  ......      .
T Consensus       184 ~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~  251 (337)
T cd07852         184 LLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGT------STLNQLEKIIEVIGPPSAEDIESIKSPFAATMLD------S  251 (337)
T ss_pred             eeccccccccchHHHHHHHHHHHHhCCCCCCCC------ChHHHHHHHHHHhCCCCHHHHHHHHhhhHHHhhh------h
Confidence            8654 4788999999999999999999999765      34555666666666554433211100  000000      0


Q ss_pred             hccccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccCCcccc
Q 026540          152 IRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNSTRDET  215 (237)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~~~~~~  215 (237)
                      ..........       ......+..+.+++.+||+.||.+|||+.++++||||........++
T Consensus       252 ~~~~~~~~~~-------~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~~~~~~~~~~~~~~  308 (337)
T cd07852         252 LPSRPRKPLD-------ELLPKASDDALDLLKKLLVFNPNKRLTAEEALEHPYVAQFHNPSDEP  308 (337)
T ss_pred             cccccccchh-------hhccCCCHHHHHHHHHhccCCcccccCHHHHhhChhhhhhccCCCCC
Confidence            0000000000       11122567899999999999999999999999999999886554443

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=99.94  E-value=2.2e-27  Score=188.96  Aligned_cols=161  Identities=26%  Similarity=0.358  Sum_probs=123.7

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcCc-------ccCcCCCcccchHHh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQF-------AEEIQTRQYRAPEVI   75 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~~-------~~~~~~~~~~~PE~~   75 (237)
                      +++..+..++.|++.++.++|..++.|+|+||+||+++.++.++++|||.+.......       ....++..|++||.+
T Consensus        99 ~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~  178 (267)
T cd06610          99 LDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGDRTRKVRKTFVGTPCWMAPEVM  178 (267)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEcccchHHHhccCccccccccccccCChhhcChHHH
Confidence            5788899999999999999999999999999999999999999999999875433211       223567889999999


Q ss_pred             hhc-CCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcc
Q 026540           76 LRA-GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRR  154 (237)
Q Consensus        76 ~~~-~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (237)
                      ... .++.++|+||+|++++++++|..||....      ...   ...+.....+..                       
T Consensus       179 ~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~------~~~---~~~~~~~~~~~~-----------------------  226 (267)
T cd06610         179 EQVHGYDFKADIWSFGITAIELATGAAPYSKYP------PMK---VLMLTLQNDPPS-----------------------  226 (267)
T ss_pred             ccccCcCcccchHhHhHHHHHHHhCCCCccccC------hhh---hHHHHhcCCCCC-----------------------
Confidence            877 68899999999999999999999996542      111   111111100000                       


Q ss_pred             ccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCc
Q 026540          155 LKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL  205 (237)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f  205 (237)
                           ..     .......++..+.+++.+||+.||.+|||++++++||||
T Consensus       227 -----~~-----~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~p~~  267 (267)
T cd06610         227 -----LE-----TGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLKHKFF  267 (267)
T ss_pred             -----cC-----CccccccccHHHHHHHHHHcCCChhhCcCHHHHhhCCCC
Confidence                 00     000012346788999999999999999999999999998

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=99.94  E-value=2.8e-27  Score=191.84  Aligned_cols=163  Identities=24%  Similarity=0.375  Sum_probs=126.7

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC---cccCcCCCcccchHHhhhcC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ---FAEEIQTRQYRAPEVILRAG   79 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~~~~PE~~~~~~   79 (237)
                      +++.++..++.+++.+|.|+|..++.|+||||+||+++.++.++++|||++......   .....++..|++||.+.+..
T Consensus       112 ~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  191 (297)
T cd06656         112 MDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKA  191 (297)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEECcCccceEccCCccCcCcccCCccccCHHHHcCCC
Confidence            467889999999999999999999999999999999999999999999988654322   22346678899999998888


Q ss_pred             CCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCc
Q 026540           80 YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWS  159 (237)
Q Consensus        80 ~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (237)
                      ++.++|+||+|++++++++|..||......      ..+..+. ..+.                                
T Consensus       192 ~~~~~Di~slGvil~~l~tg~~pf~~~~~~------~~~~~~~-~~~~--------------------------------  232 (297)
T cd06656         192 YGPKVDIWSLGIMAIEMVEGEPPYLNENPL------RALYLIA-TNGT--------------------------------  232 (297)
T ss_pred             CCcHHHHHHHHHHHHHHHhCCCCCCCCCcc------hheeeec-cCCC--------------------------------
Confidence            899999999999999999999999654210      0000000 0000                                


Q ss_pred             hhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccC
Q 026540          160 LDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNS  210 (237)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~  210 (237)
                            .....+...+..+.+|+.+||..+|.+||+++++++||||.....
T Consensus       233 ------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~~~  277 (297)
T cd06656         233 ------PELQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQHPFLKLAKP  277 (297)
T ss_pred             ------CCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCchhccccc
Confidence                  000112334567889999999999999999999999999986544

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]

Probab=99.94  E-value=2.2e-27  Score=209.49  Aligned_cols=163  Identities=20%  Similarity=0.278  Sum_probs=131.2

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC----cccCcCCCcccchHHhhh-
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ----FAEEIQTRQYRAPEVILR-   77 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~----~~~~~~~~~~~~PE~~~~-   77 (237)
                      |.|+=|+-|++.++-||+.+|.+|++||||||+|||+|..|++||+|||.+..+...    ....+|||-|.+||++.. 
T Consensus       172 ~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLld~~GHikLADFGsClkm~~dG~V~s~~aVGTPDYISPEvLqs~  251 (1317)
T KOG0612|consen  172 LPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLLDKSGHIKLADFGSCLKMDADGTVRSSVAVGTPDYISPEVLQSQ  251 (1317)
T ss_pred             ChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEecccCcEeeccchhHHhcCCCCcEEeccccCCCCccCHHHHHhh
Confidence            789999999999999999999999999999999999999999999999998665532    345699999999999983 


Q ss_pred             ----cCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhc
Q 026540           78 ----AGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIR  153 (237)
Q Consensus        78 ----~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (237)
                          +.|++.+|.||+|+++|+|+.|..||+..+             +++.+|.+-..                      
T Consensus       252 ~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYads-------------lveTY~KIm~h----------------------  296 (1317)
T KOG0612|consen  252 GDGKGEYGRECDWWSLGVFMYEMLYGETPFYADS-------------LVETYGKIMNH----------------------  296 (1317)
T ss_pred             cCCccccCCccchhhhHHHHHHHHcCCCcchHHH-------------HHHHHHHHhch----------------------
Confidence                348999999999999999999999998653             12222111100                      


Q ss_pred             cccCCchhHHhhhhcCCC--HHhHHHHHHHHHhccccCCCCCCC---HHHHhcCCCcCcccCCc
Q 026540          154 RLKFWSLDRLLVDKYRFS--ETDAREFAEFLVPLLDFTPEKRPT---AQQCLQHPWLSLRNSTR  212 (237)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~li~~~L~~dP~~R~t---~~ell~hp~f~~~~~~~  212 (237)
                                 .+...+|  ...+.++.+||.+++. +|+.|..   ++++..||||.+.+|..
T Consensus       297 -----------k~~l~FP~~~~VSeeakdLI~~ll~-~~e~RLgrngiedik~HpFF~g~~W~~  348 (1317)
T KOG0612|consen  297 -----------KESLSFPDETDVSEEAKDLIEALLC-DREVRLGRNGIEDIKNHPFFEGIDWDN  348 (1317)
T ss_pred             -----------hhhcCCCcccccCHHHHHHHHHHhc-ChhhhcccccHHHHHhCccccCCChhh
Confidence                       0111222  2357889999998774 6899998   99999999999988843

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=99.94  E-value=5.3e-27  Score=185.75  Aligned_cols=156  Identities=18%  Similarity=0.188  Sum_probs=124.1

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC---cccCcCCCcccchHHhhhcC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ---FAEEIQTRQYRAPEVILRAG   79 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~~~~PE~~~~~~   79 (237)
                      +++.++.+++.+++.+|.|+|..++.|+|+||+||+++.++.++++|||++......   .....++..|++||++.+..
T Consensus        98 ~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  177 (256)
T cd08529          98 LPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTNFANTIVGTPYYLSPELCEDKP  177 (256)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEeCCCCEEEcccccceeccCccchhhccccCccccCHHHhcCCC
Confidence            567788999999999999999999999999999999999999999999987654332   12335678899999999888


Q ss_pred             CCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCc
Q 026540           80 YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWS  159 (237)
Q Consensus        80 ~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (237)
                      ++.++|+||+|++++++++|..||....      .......+.+  +.                                
T Consensus       178 ~~~~~Di~slG~il~~l~~g~~p~~~~~------~~~~~~~~~~--~~--------------------------------  217 (256)
T cd08529         178 YNEKSDVWALGVVLYECCTGKHPFDANN------QGALILKIIR--GV--------------------------------  217 (256)
T ss_pred             CCCccchHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHc--CC--------------------------------
Confidence            8999999999999999999999996542      1111111100  00                                


Q ss_pred             hhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCc
Q 026540          160 LDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL  205 (237)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f  205 (237)
                             ....+...+..+.+++.+|++.+|++||++.++++|||+
T Consensus       218 -------~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~~~~  256 (256)
T cd08529         218 -------FPPVSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRNPSL  256 (256)
T ss_pred             -------CCCCccccCHHHHHHHHHHccCCcccCcCHHHHhhCCCC
Confidence                   001122346778999999999999999999999999995

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=99.94  E-value=2.1e-27  Score=190.59  Aligned_cols=168  Identities=23%  Similarity=0.288  Sum_probs=130.7

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCc--CcccCcCCCcccchHHhhhcC
Q 026540            2 TIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK--QFAEEIQTRQYRAPEVILRAG   79 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~--~~~~~~~~~~~~~PE~~~~~~   79 (237)
                      .+++.++..++.|++.+|.|+|..+++|+||+|+||+++.++.++++|||.+.....  ......++..|++||.+.+..
T Consensus        91 ~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~  170 (277)
T cd05577          91 GFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLLDDHGNVRISDLGLAVELKGGKKIKGRAGTPGYMAPEVLQGEV  170 (277)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEccCcchhhhccCCccccccCCCCcCCHHHhcCCC
Confidence            367889999999999999999999999999999999999999999999998754322  222345677899999998888


Q ss_pred             CCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCc
Q 026540           80 YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWS  159 (237)
Q Consensus        80 ~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (237)
                      ++.++|+||+|++++++++|..||......   .....   +...                                   
T Consensus       171 ~~~~~Di~slG~il~~l~~g~~p~~~~~~~---~~~~~---~~~~-----------------------------------  209 (277)
T cd05577         171 YDFSVDWFALGCTLYEMIAGRSPFRQRKEK---VEKEE---LKRR-----------------------------------  209 (277)
T ss_pred             CCchhhhHHHHHHHHHHhhCCCCCCCCccc---ccHHH---HHhc-----------------------------------
Confidence            899999999999999999999999655310   00000   0000                                   


Q ss_pred             hhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCC-----CHHHHhcCCCcCcccCCcc
Q 026540          160 LDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRP-----TAQQCLQHPWLSLRNSTRD  213 (237)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~-----t~~ell~hp~f~~~~~~~~  213 (237)
                         ........+...++.+.++|.+||+.+|.+||     ++.+++.||||...++...
T Consensus       210 ---~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~h~~~~~~~~~~~  265 (277)
T cd05577         210 ---TLEMAVEYPDKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVREHPLFKDLNWRRL  265 (277)
T ss_pred             ---cccccccCCccCCHHHHHHHHHHccCChhHccCCCcccHHHHHhChhhhcCChhhh
Confidence               00001112334577889999999999999999     8999999999998776544

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=99.94  E-value=2.8e-27  Score=191.06  Aligned_cols=159  Identities=24%  Similarity=0.272  Sum_probs=121.7

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCc---CcccCcCCCcccchHHhhhcC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK---QFAEEIQTRQYRAPEVILRAG   79 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~---~~~~~~~~~~~~~PE~~~~~~   79 (237)
                      +.+..+..++.|++.+|+++|..+++|+||||+||+++.++.++|+|||++.....   ......++..|++||.+....
T Consensus       125 ~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  204 (291)
T cd06639         125 LDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQ  204 (291)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEeecccchhcccccccccCccCCccccChhhhcCCC
Confidence            56788899999999999999999999999999999999999999999998764332   122345678899999986432


Q ss_pred             -----CCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcc
Q 026540           80 -----YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRR  154 (237)
Q Consensus        80 -----~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (237)
                           ++.++|+||+|++++++++|+.||....      ....+.   ......+.                        
T Consensus       205 ~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~------~~~~~~---~~~~~~~~------------------------  251 (291)
T cd06639         205 QYDYSYDARCDVWSLGITAIELGDGDPPLFDMH------PVKTLF---KIPRNPPP------------------------  251 (291)
T ss_pred             CcccccCCccchHHHHHHHHHHhhCCCCCCCCc------HHHHHH---HHhcCCCC------------------------
Confidence                 5789999999999999999999986542      111111   11100000                        


Q ss_pred             ccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcC
Q 026540          155 LKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLS  206 (237)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~  206 (237)
                                  ....+......+.+++.+||+.+|++||++.++++||||.
T Consensus       252 ------------~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~  291 (291)
T cd06639         252 ------------TLLHPEKWCRSFNHFISQCLIKDFEARPSVTHLLEHPFIK  291 (291)
T ss_pred             ------------CCCcccccCHHHHHHHHHHhhcChhhCcCHHHHhcCcccC
Confidence                        0011222345688999999999999999999999999994

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=99.94  E-value=4.2e-27  Score=188.45  Aligned_cols=161  Identities=22%  Similarity=0.285  Sum_probs=127.5

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC---cccCcCCCcccchHHhhhcC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ---FAEEIQTRQYRAPEVILRAG   79 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~~~~PE~~~~~~   79 (237)
                      +++.++..++.|++.++.|+|..++.|+||+|+||+++.++.++++|||++......   .....++..|++||.+.+..
T Consensus        95 ~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~  174 (274)
T cd06609          95 LDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTMSKRNTFVGTPFWMAPEVIKQSG  174 (274)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEcccccceeecccccccccccCCccccChhhhccCC
Confidence            567889999999999999999999999999999999999999999999998654422   23446678899999999888


Q ss_pred             CCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCc
Q 026540           80 YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWS  159 (237)
Q Consensus        80 ~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (237)
                      ++.++|+||+|++++++++|..||....      .......+..   ..                               
T Consensus       175 ~~~~sDv~slG~il~~l~tg~~p~~~~~------~~~~~~~~~~---~~-------------------------------  214 (274)
T cd06609         175 YDEKADIWSLGITAIELAKGEPPLSDLH------PMRVLFLIPK---NN-------------------------------  214 (274)
T ss_pred             CCchhhHHHHHHHHHHHHhCCCCcccCc------hHHHHHHhhh---cC-------------------------------
Confidence            9999999999999999999999996542      1111110000   00                               


Q ss_pred             hhHHhhhhcCCCHH-hHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccC
Q 026540          160 LDRLLVDKYRFSET-DAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNS  210 (237)
Q Consensus       160 ~~~~~~~~~~~~~~-~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~  210 (237)
                             ....... .+..+.+++.+||..+|.+|||++++++||||.....
T Consensus       215 -------~~~~~~~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~~~~~~~~~~  259 (274)
T cd06609         215 -------PPSLEGNKFSKPFKDFVSLCLNKDPKERPSAKELLKHKFIKKAKK  259 (274)
T ss_pred             -------CCCCcccccCHHHHHHHHHHhhCChhhCcCHHHHhhChhhcCCCc
Confidence                   0001111 4567889999999999999999999999999986543

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=99.94  E-value=3.9e-27  Score=189.77  Aligned_cols=166  Identities=24%  Similarity=0.371  Sum_probs=127.7

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhh-hcCCccCCCCCccccCCCCcEEEeecCcceecCc-CcccCcCCCcccchHHhhhcC
Q 026540            2 TIVEKKLKRRAKRAVANISIRRA-SMGGIELPKPERCLDGIDMRCKVVDFGNACRANK-QFAEEIQTRQYRAPEVILRAG   79 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~-~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~-~~~~~~~~~~~~~PE~~~~~~   79 (237)
                      .+++..+..++.+++.+|.|+|. .++.|+||||+||+++.++.++++|||.+..... ......++..|++||.+.+..
T Consensus        98 ~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  177 (286)
T cd06622          98 GIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVASLAKTNIGCQSYMAPERIKSGG  177 (286)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEECCCCCEEEeecCCcccccCCccccCCCccCccCcchhcCCC
Confidence            46788999999999999999997 5899999999999999999999999998865432 223345678899999986543


Q ss_pred             ------CCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhc
Q 026540           80 ------YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIR  153 (237)
Q Consensus        80 ------~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (237)
                            ++.++|+||+|++++++++|..||....      .......+..+....                         
T Consensus       178 ~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~------~~~~~~~~~~~~~~~-------------------------  226 (286)
T cd06622         178 PNQNPTYTVQSDVWSLGLSILEMALGRYPYPPET------YANIFAQLSAIVDGD-------------------------  226 (286)
T ss_pred             CCccCCCCcccchHhHHHHHHHHHhCCCCCCCcc------hhhHHHHHHHHhhcC-------------------------
Confidence                  4778999999999999999999996532      111111111111000                         


Q ss_pred             cccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccCC
Q 026540          154 RLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNST  211 (237)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~~  211 (237)
                                   ....+..++..+.+|+.+||+.+|.+||++++++.||||......
T Consensus       227 -------------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~~~~~~~~~~  271 (286)
T cd06622         227 -------------PPTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEHPWLVKYKNA  271 (286)
T ss_pred             -------------CCCCCcccCHHHHHHHHHHcccCcccCCCHHHHhcChhhhhccCC
Confidence                         011233456788999999999999999999999999999977654

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=99.94  E-value=2.7e-27  Score=191.92  Aligned_cols=162  Identities=24%  Similarity=0.346  Sum_probs=126.7

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCc---CcccCcCCCcccchHHhhhcC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK---QFAEEIQTRQYRAPEVILRAG   79 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~---~~~~~~~~~~~~~PE~~~~~~   79 (237)
                      +++.++..++.|++.+|.|+|..+++|+||||+||+++.++.++|+|||++.....   ......++..|++||.+.+..
T Consensus       114 ~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  193 (297)
T cd06659         114 LNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRTP  193 (297)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEEccCCcEEEeechhHhhcccccccccceecCccccCHHHHccCC
Confidence            56788999999999999999999999999999999999999999999998754322   122346788999999998888


Q ss_pred             CCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCc
Q 026540           80 YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWS  159 (237)
Q Consensus        80 ~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (237)
                      ++.++|+||+|++++++++|..||....      ....+..+   ....+.                             
T Consensus       194 ~~~~~Dv~slG~il~el~~g~~p~~~~~------~~~~~~~~---~~~~~~-----------------------------  235 (297)
T cd06659         194 YGTEVDIWSLGIMVIEMVDGEPPYFSDS------PVQAMKRL---RDSPPP-----------------------------  235 (297)
T ss_pred             CCchhhHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHH---hccCCC-----------------------------
Confidence            8999999999999999999999997542      11111111   000000                             


Q ss_pred             hhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCccc
Q 026540          160 LDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRN  209 (237)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~  209 (237)
                             ........+..+.+++.+||+.+|.+||+++++++||||....
T Consensus       236 -------~~~~~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~~~~~~~~  278 (297)
T cd06659         236 -------KLKNAHKISPVLRDFLERMLTREPQERATAQELLDHPFLLQTG  278 (297)
T ss_pred             -------CccccCCCCHHHHHHHHHHhcCCcccCcCHHHHhhChhhccCC
Confidence                   0001112356788999999999999999999999999999664

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=99.94  E-value=3.9e-27  Score=187.68  Aligned_cols=158  Identities=25%  Similarity=0.315  Sum_probs=123.6

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecC---------cCcccCcCCCcccchH
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRAN---------KQFAEEIQTRQYRAPE   73 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~---------~~~~~~~~~~~~~~PE   73 (237)
                      +.+..+..++.|++.+|.|+|..++.|+||+|+||+++.++.++++|||++....         .......++..|++||
T Consensus        99 ~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe  178 (265)
T cd06631          99 LPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGLHGTHSNMLKSMHGTPYWMAPE  178 (265)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHhEEECCCCeEEeccchhhHhhhhccccccccccccccCCCccccChh
Confidence            5678889999999999999999999999999999999999999999999875431         1112345678899999


Q ss_pred             HhhhcCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhc
Q 026540           74 VILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIR  153 (237)
Q Consensus        74 ~~~~~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (237)
                      .+.+..++.++|+||+|++++++++|..||....      .......+....+.                          
T Consensus       179 ~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~------~~~~~~~~~~~~~~--------------------------  226 (265)
T cd06631         179 VINESGYGRKSDIWSIGCTVFEMATGKPPLASMD------RLAAMFYIGAHRGL--------------------------  226 (265)
T ss_pred             hhcCCCCcchhhHHHHHHHHHHHHhCCCccccCC------hHHHHHHhhhccCC--------------------------
Confidence            9988888999999999999999999999996542      11111000000000                          


Q ss_pred             cccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCc
Q 026540          154 RLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL  205 (237)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f  205 (237)
                                   ....+...+..+.+|+.+||+.+|.+||++.++++||||
T Consensus       227 -------------~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~~  265 (265)
T cd06631         227 -------------MPRLPDSFSAAAIDFVTSCLTRDQHERPSALQLLRHDFL  265 (265)
T ss_pred             -------------CCCCCCCCCHHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence                         011233446778999999999999999999999999997

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=99.94  E-value=2.6e-27  Score=192.97  Aligned_cols=195  Identities=18%  Similarity=0.263  Sum_probs=128.3

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhh-hcCCccCCCCCccccCCCCcEEEeecCcceecCc-CcccCcCCCcccchHHhhhcCC
Q 026540            3 IVEKKLKRRAKRAVANISIRRA-SMGGIELPKPERCLDGIDMRCKVVDFGNACRANK-QFAEEIQTRQYRAPEVILRAGY   80 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~-~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~-~~~~~~~~~~~~~PE~~~~~~~   80 (237)
                      +++..+..++.|++.+|.|+|+ .++.|+||||+||+++.++.++++|||++..... ......++..|++||.+.+..+
T Consensus        96 ~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~  175 (308)
T cd06615          96 IPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHY  175 (308)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEecCCcEEEccCCCcccccccccccCCCCcCccChhHhcCCCC
Confidence            5678889999999999999998 5799999999999999999999999998754322 2234567889999999887778


Q ss_pred             CchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCch
Q 026540           81 SFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSL  160 (237)
Q Consensus        81 ~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (237)
                      +.++|+||+|++++++++|..||....      . .   .....++............ ..........  .........
T Consensus       176 ~~~~DiwslG~~l~~l~~g~~p~~~~~------~-~---~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~  242 (308)
T cd06615         176 TVQSDIWSLGLSLVEMAIGRYPIPPPD------A-K---ELEAMFGRPVSEGEAKESH-RPVSGHPPDS--PRPMAIFEL  242 (308)
T ss_pred             CccchHHHHHHHHHHHHhCCCCCCCcc------h-h---hHHHhhcCccccccccCCc-ccccCCCCCc--cchhhHHHH
Confidence            899999999999999999999986542      1 1   1111121111110000000 0000000000  000000000


Q ss_pred             hHH-hhh-hcCCC-HHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccC
Q 026540          161 DRL-LVD-KYRFS-ETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNS  210 (237)
Q Consensus       161 ~~~-~~~-~~~~~-~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~  210 (237)
                      .+. ... ....+ ...+.++.+|+.+||..+|.+|||++++++||||..+..
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~~  295 (308)
T cd06615         243 LDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHPFIKRAEL  295 (308)
T ss_pred             HHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhhccc
Confidence            000 000 00011 124667999999999999999999999999999987543

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=99.94  E-value=3.2e-27  Score=187.99  Aligned_cols=165  Identities=24%  Similarity=0.348  Sum_probs=126.9

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhh-hcCCccCCCCCccccCCCCcEEEeecCcceecCcC-cccCcCCCcccchHHhhhcCC
Q 026540            3 IVEKKLKRRAKRAVANISIRRA-SMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ-FAEEIQTRQYRAPEVILRAGY   80 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~-~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~-~~~~~~~~~~~~PE~~~~~~~   80 (237)
                      +++..+..++.|++.++.|+|. .++.|+||||+||+++.++.++|+|||.+...... .....++..|++||.+.+..+
T Consensus        97 ~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~  176 (265)
T cd06605          97 IPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLAKTFVGTSSYMAPERIQGNDY  176 (265)
T ss_pred             CCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEECCCCCEEEeecccchhhHHHHhhcccCChhccCHHHHcCCCC
Confidence            4677888999999999999999 99999999999999999999999999987543321 112567788999999988889


Q ss_pred             CchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCch
Q 026540           81 SFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSL  160 (237)
Q Consensus        81 ~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (237)
                      +.++|+||+|++++++++|..||......    .......+.......                                
T Consensus       177 ~~~~Dv~slG~~l~~l~~g~~p~~~~~~~----~~~~~~~~~~~~~~~--------------------------------  220 (265)
T cd06605         177 SVKSDIWSLGLSLIELATGRFPYPPENDP----PDGIFELLQYIVNEP--------------------------------  220 (265)
T ss_pred             CchhhHHHHHHHHHHHHhCCCCCCccccc----cccHHHHHHHHhcCC--------------------------------
Confidence            99999999999999999999998654210    011111111111100                                


Q ss_pred             hHHhhhhcCCCHH-hHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCccc
Q 026540          161 DRLLVDKYRFSET-DAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRN  209 (237)
Q Consensus       161 ~~~~~~~~~~~~~-~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~  209 (237)
                            ....+.. .+.++.++|.+||..+|.+|||+.+++.||||+.+.
T Consensus       221 ------~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~~~~~  264 (265)
T cd06605         221 ------PPRLPSGKFSPDFQDFVNLCLIKDPRERPSYKELLEHPFIKKYE  264 (265)
T ss_pred             ------CCCCChhhcCHHHHHHHHHHcCCCchhCcCHHHHhhCchhhccc
Confidence                  0011111 467789999999999999999999999999998654

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=99.94  E-value=4.9e-27  Score=187.34  Aligned_cols=157  Identities=22%  Similarity=0.331  Sum_probs=120.7

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCc------CcccCcCCCcccchHHhh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK------QFAEEIQTRQYRAPEVIL   76 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~------~~~~~~~~~~~~~PE~~~   76 (237)
                      +++.....++.|++.+|.|+|..+++|+|+||+||+++.++.++|+|||++.....      ......++..|++||.+.
T Consensus       103 l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  182 (266)
T cd06651         103 LTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICMSGTGIRSVTGTPYWMSPEVIS  182 (266)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCCCccccccccccCCccccCCccccccCHHHhC
Confidence            46778889999999999999999999999999999999999999999998864321      112235678899999998


Q ss_pred             hcCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcccc
Q 026540           77 RAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLK  156 (237)
Q Consensus        77 ~~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (237)
                      +..++.++|+||+|++++++++|+.||....         ....+.......                            
T Consensus       183 ~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~---------~~~~~~~~~~~~----------------------------  225 (266)
T cd06651         183 GEGYGRKADVWSLGCTVVEMLTEKPPWAEYE---------AMAAIFKIATQP----------------------------  225 (266)
T ss_pred             CCCCCchhhhHHHHHHHHHHHHCCCCccccc---------hHHHHHHHhcCC----------------------------
Confidence            8888999999999999999999999986432         111111110000                            


Q ss_pred             CCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcC
Q 026540          157 FWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLS  206 (237)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~  206 (237)
                               .....+...+..+.+++ +|+..+|++||+++|+++||||.
T Consensus       226 ---------~~~~~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~hp~~~  265 (266)
T cd06651         226 ---------TNPQLPSHISEHARDFL-GCIFVEARHRPSAEELLRHPFAQ  265 (266)
T ss_pred             ---------CCCCCchhcCHHHHHHH-HHhcCChhhCcCHHHHhcCcccc
Confidence                     00111233456677787 67778999999999999999986

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=99.94  E-value=4.1e-27  Score=176.55  Aligned_cols=156  Identities=17%  Similarity=0.182  Sum_probs=117.4

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcCcccCcCCCcccchHHhhhcCCC
Q 026540            2 TIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYS   81 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~   81 (237)
                      .|++.++..++.|++.||.|+|..+      ||+||+++.++.+++  ||++......  ...+++.|+|||++.+..++
T Consensus        13 ~l~~~~~~~i~~qi~~~L~~lH~~~------kp~Nil~~~~~~~~~--fG~~~~~~~~--~~~g~~~y~aPE~~~~~~~~   82 (176)
T smart00750       13 PLNEEEIWAVCLQCLRALRELHRQA------KSGNILLTWDGLLKL--DGSVAFKTPE--QSRVDPYFMAPEVIQGQSYT   82 (176)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhcC------CcccEeEcCccceee--ccceEeeccc--cCCCcccccChHHhcCCCCc
Confidence            3789999999999999999999988      999999999999999  9988654432  23678999999999998999


Q ss_pred             chhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCchh
Q 026540           82 FSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLD  161 (237)
Q Consensus        82 ~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (237)
                      .++||||+|+++|++++|..||.....     ....+..+.........                               
T Consensus        83 ~~~DiwSlG~il~elltg~~p~~~~~~-----~~~~~~~~~~~~~~~~~-------------------------------  126 (176)
T smart00750       83 EKADIYSLGITLYEALDYELPYNEERE-----LSAILEILLNGMPADDP-------------------------------  126 (176)
T ss_pred             chhhHHHHHHHHHHHHhCCCCccccch-----hcHHHHHHHHHhccCCc-------------------------------
Confidence            999999999999999999999864420     01111111111000000                               


Q ss_pred             HHhhhhcCCCHHhHH--HHHHHHHhccccCCCCCCCHHHHhcCCCcCc
Q 026540          162 RLLVDKYRFSETDAR--EFAEFLVPLLDFTPEKRPTAQQCLQHPWLSL  207 (237)
Q Consensus       162 ~~~~~~~~~~~~~~~--~~~~li~~~L~~dP~~R~t~~ell~hp~f~~  207 (237)
                          .........+.  .+.+++.+||..+|.+||++.|+++|+|+..
T Consensus       127 ----~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~  170 (176)
T smart00750      127 ----RDRSNLESVSAARSFADFMRVCASRLPQRREAANHYLAHCRALF  170 (176)
T ss_pred             ----cccccHHHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHHHH
Confidence                00000112222  6899999999999999999999999999874

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.94  E-value=1.7e-27  Score=215.91  Aligned_cols=157  Identities=16%  Similarity=0.141  Sum_probs=114.5

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCC-------------------CCcEEEeecCcceecCc-----
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGI-------------------DMRCKVVDFGNACRANK-----   58 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~-------------------~~~~kl~dfg~~~~~~~-----   58 (237)
                      +++.+++.+++||++||.|+|..+|+||||||+|||++.                   ++.+|++|||+++....     
T Consensus        77 ~~~~~~~~i~~qi~~al~~lH~~gIvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~  156 (793)
T PLN00181         77 VDAFECFHVFRQIVEIVNAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERR  156 (793)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHhCCeeeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccc
Confidence            678899999999999999999999999999999999954                   34556666666542110     


Q ss_pred             --------------CcccCcCCCcccchHHhhhcCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHH
Q 026540           59 --------------QFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMEL  124 (237)
Q Consensus        59 --------------~~~~~~~~~~~~~PE~~~~~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~  124 (237)
                                    .....+++++|+|||++.+..++.++||||+||+++||++|..|+....        .....+...
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~--------~~~~~~~~~  228 (793)
T PLN00181        157 IEKLEEVKKQPFPMKQILAMEMSWYTSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKS--------RTMSSLRHR  228 (793)
T ss_pred             hhhhhccccCCCcccccccCCCcceEChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHH--------HHHHHHHHh
Confidence                          0011356888999999999899999999999999999999877653210        111111000


Q ss_pred             HCCCCHHHHhcCCCchhhhcccCccchhccccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCC
Q 026540          125 IGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPW  204 (237)
Q Consensus       125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~  204 (237)
                        ..++.                                       .........+++.+||+.+|.+||++.|+++|||
T Consensus       229 --~~~~~---------------------------------------~~~~~~~~~~~~~~~L~~~P~~Rps~~eil~h~~  267 (793)
T PLN00181        229 --VLPPQ---------------------------------------ILLNWPKEASFCLWLLHPEPSCRPSMSELLQSEF  267 (793)
T ss_pred             --hcChh---------------------------------------hhhcCHHHHHHHHHhCCCChhhCcChHHHhhchh
Confidence              00000                                       0001233458889999999999999999999999


Q ss_pred             cCcc
Q 026540          205 LSLR  208 (237)
Q Consensus       205 f~~~  208 (237)
                      |...
T Consensus       268 ~~~~  271 (793)
T PLN00181        268 INEP  271 (793)
T ss_pred             hhhh
Confidence            9864

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=99.94  E-value=3.6e-27  Score=189.42  Aligned_cols=162  Identities=23%  Similarity=0.330  Sum_probs=124.8

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCc---CcccCcCCCcccchHHhhh--
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK---QFAEEIQTRQYRAPEVILR--   77 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~---~~~~~~~~~~~~~PE~~~~--   77 (237)
                      +++..+..++.|++.+|.|+|..++.|+|+||+||+++.++.++++|||++.....   ......++..|++||.+..  
T Consensus       100 l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~  179 (280)
T cd06611         100 LTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTLQKRDTFIGTPYWMAPEVVACET  179 (280)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEECCCCCEEEccCccchhhcccccccceeecchhhcCHHHHhhcc
Confidence            67889999999999999999999999999999999999999999999998754322   2223467888999999863  


Q ss_pred             ---cCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcc
Q 026540           78 ---AGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRR  154 (237)
Q Consensus        78 ---~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (237)
                         ..++.++|+||+|++++++++|..||....      ......   ......+                         
T Consensus       180 ~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~------~~~~~~---~~~~~~~-------------------------  225 (280)
T cd06611         180 FKDNPYDYKADIWSLGITLIELAQMEPPHHELN------PMRVLL---KILKSEP-------------------------  225 (280)
T ss_pred             cCCCCCCccccHHHHHHHHHHHHhCCCCcccCC------HHHHHH---HHhcCCC-------------------------
Confidence               346778999999999999999999986542      111111   1110000                         


Q ss_pred             ccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCccc
Q 026540          155 LKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRN  209 (237)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~  209 (237)
                                 .....+...+..+.+++.+||+.+|.+||+++++++||||....
T Consensus       226 -----------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~~  269 (280)
T cd06611         226 -----------PTLDQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKHPFVSDQS  269 (280)
T ss_pred             -----------CCcCCcccCCHHHHHHHHHHhccChhhCcCHHHHhcChhhcccc
Confidence                       00011223456788999999999999999999999999998663

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=99.94  E-value=5.1e-27  Score=187.21  Aligned_cols=159  Identities=25%  Similarity=0.287  Sum_probs=120.3

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC---cccCcCCCcccchHHhh---
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ---FAEEIQTRQYRAPEVIL---   76 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~~~~PE~~~---   76 (237)
                      +++.++..++.|++.++.|+|..+++|+||||+||+++.++.++|+|||++......   .....++..|+|||.+.   
T Consensus       103 ~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  182 (267)
T cd06645         103 LSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLTDNGHVKLADFGVSAQITATIAKRKSFIGTPYWMAPEVAAVER  182 (267)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECcceeeeEccCcccccccccCcccccChhhhcccc
Confidence            578899999999999999999999999999999999999999999999988654322   22346788999999985   


Q ss_pred             hcCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcccc
Q 026540           77 RAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLK  156 (237)
Q Consensus        77 ~~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (237)
                      ...++.++|+||+|++++++++|..||....      .......+..  ....                           
T Consensus       183 ~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~------~~~~~~~~~~--~~~~---------------------------  227 (267)
T cd06645         183 KGGYNQLCDIWAVGITAIELAELQPPMFDLH------PMRALFLMTK--SNFQ---------------------------  227 (267)
T ss_pred             CCCCCchhhhHHHHHHHHHHhcCCCCccccc------chhhHHhhhc--cCCC---------------------------
Confidence            3457889999999999999999999886442      1000000000  0000                           


Q ss_pred             CCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCC
Q 026540          157 FWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPW  204 (237)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~  204 (237)
                              ..........+..+.+|+.+||..+|++||+++++++|||
T Consensus       228 --------~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~~~~  267 (267)
T cd06645         228 --------PPKLKDKMKWSNSFHHFVKMALTKNPKKRPTAEKLLQHPF  267 (267)
T ss_pred             --------CCcccccCCCCHHHHHHHHHHccCCchhCcCHHHHhcCCC
Confidence                    0000000123456889999999999999999999999998

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=99.94  E-value=7e-27  Score=188.39  Aligned_cols=162  Identities=24%  Similarity=0.331  Sum_probs=126.0

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC---cccCcCCCcccchHHhhhcC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ---FAEEIQTRQYRAPEVILRAG   79 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~~~~PE~~~~~~   79 (237)
                      +++.++..++.|++.++.++|..++.|+||+|+||+++.++.++++|||.+......   .....++..|++||.+.+..
T Consensus       112 ~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  191 (285)
T cd06648         112 MNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPEVISRLP  191 (285)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCeecCCCChhhEEEcCCCcEEEcccccchhhccCCcccccccCCccccCHHHhcCCC
Confidence            567888999999999999999999999999999999999999999999976533221   12345788999999998888


Q ss_pred             CCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCc
Q 026540           80 YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWS  159 (237)
Q Consensus        80 ~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (237)
                      ++.++|+||+|++++++++|..||...+      .......+..   ..+.                             
T Consensus       192 ~~~~~Dv~slGv~l~ell~g~~p~~~~~------~~~~~~~~~~---~~~~-----------------------------  233 (285)
T cd06648         192 YGTEVDIWSLGIMVIEMVDGEPPYFNEP------PLQAMKRIRD---NLPP-----------------------------  233 (285)
T ss_pred             CCCcccHHHHHHHHHHHHhCCCCCcCCC------HHHHHHHHHh---cCCC-----------------------------
Confidence            8999999999999999999999986542      1111111100   0000                             


Q ss_pred             hhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCccc
Q 026540          160 LDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRN  209 (237)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~  209 (237)
                             ....+...+..+.+|+.+||+.+|.+|||++++++||||....
T Consensus       234 -------~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~  276 (285)
T cd06648         234 -------KLKNLHKVSPRLRSFLDRMLVRDPAQRATAAELLNHPFLAKAG  276 (285)
T ss_pred             -------CCcccccCCHHHHHHHHHHcccChhhCcCHHHHccCcccccCC
Confidence                   0001112456789999999999999999999999999998754

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=99.94  E-value=5.1e-27  Score=188.64  Aligned_cols=163  Identities=26%  Similarity=0.332  Sum_probs=125.8

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhh-cCCccCCCCCccccCCCCcEEEeecCcceecCcC--cccCcCCCcccchHHhhh--
Q 026540            3 IVEKKLKRRAKRAVANISIRRAS-MGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ--FAEEIQTRQYRAPEVILR--   77 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~-~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~--~~~~~~~~~~~~PE~~~~--   77 (237)
                      +++..+..++.|++.||.|+|.. ++.|+||||+||+++.++.+||+|||++......  .....++..|++||.+.+  
T Consensus       100 ~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  179 (283)
T cd06617         100 IPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLINRNGQVKLCDFGISGYLVDSVAKTIDAGCKPYMAPERINPEL  179 (283)
T ss_pred             CCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeecccccccccccccccccCCccccChhhcCCcc
Confidence            67889999999999999999997 8999999999999999999999999998654322  223467788999998865  


Q ss_pred             --cCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccc
Q 026540           78 --AGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRL  155 (237)
Q Consensus        78 --~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (237)
                        ..++.++|+||+|++++++++|+.||....     .....+.   .......                          
T Consensus       180 ~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~-----~~~~~~~---~~~~~~~--------------------------  225 (283)
T cd06617         180 NQKGYDVKSDVWSLGITMIELATGRFPYDSWK-----TPFQQLK---QVVEEPS--------------------------  225 (283)
T ss_pred             cccccCccccchhhHHHHHHHHhCCCCCCccc-----cCHHHHH---HHHhcCC--------------------------
Confidence              346788999999999999999999986431     1111111   1100000                          


Q ss_pred             cCCchhHHhhhhcCC-CHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccCC
Q 026540          156 KFWSLDRLLVDKYRF-SETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNST  211 (237)
Q Consensus       156 ~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~~  211 (237)
                                  ... ....+.++.+|+.+||..+|.+||++.++++||||......
T Consensus       226 ------------~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~~  270 (283)
T cd06617         226 ------------PQLPAEKFSPEFQDFVNKCLKKNYKERPNYPELLQHPFFELHLSK  270 (283)
T ss_pred             ------------CCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCchhhhcccc
Confidence                        000 11246778999999999999999999999999999976544

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=99.94  E-value=6.8e-27  Score=186.85  Aligned_cols=158  Identities=23%  Similarity=0.299  Sum_probs=121.6

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCc---CcccCcCCCcccchHHhhhc-
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK---QFAEEIQTRQYRAPEVILRA-   78 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~---~~~~~~~~~~~~~PE~~~~~-   78 (237)
                      +++..+..++.|++.||.|+|+.++.|+||+|+||+++.++.++++|||.+.....   ......++..|++||.+... 
T Consensus       110 ~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  189 (275)
T cd06608         110 LKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILLTKNAEVKLVDFGVSAQLDSTLGRRNTFIGTPYWMAPEVIACDE  189 (275)
T ss_pred             CCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEEccCCeEEECCCccceecccchhhhcCccccccccCHhHhcccc
Confidence            56788999999999999999999999999999999999999999999998754332   22334568889999998642 


Q ss_pred             ----CCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcc
Q 026540           79 ----GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRR  154 (237)
Q Consensus        79 ----~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (237)
                          .++.++|+||+|++++++++|..||....      .......   .....+                         
T Consensus       190 ~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~------~~~~~~~---~~~~~~-------------------------  235 (275)
T cd06608         190 QPDASYDARSDVWSLGITAIELADGKPPLCDMH------PMRALFK---IPRNPP-------------------------  235 (275)
T ss_pred             cccCCccccccHHHhHHHHHHHHhCCCCccccc------hHHHHHH---hhccCC-------------------------
Confidence                36778999999999999999999996432      1111111   110000                         


Q ss_pred             ccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCc
Q 026540          155 LKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL  205 (237)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f  205 (237)
                                 .....+...+..+.+|+.+||..||.+|||++++++|||+
T Consensus       236 -----------~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~~~~  275 (275)
T cd06608         236 -----------PTLKSPENWSKKFNDFISECLIKNYEQRPFMEELLEHPFI  275 (275)
T ss_pred             -----------CCCCchhhcCHHHHHHHHHHhhcChhhCcCHHHHhcCCCC
Confidence                       0001122345678899999999999999999999999996

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=99.94  E-value=1.1e-26  Score=186.75  Aligned_cols=186  Identities=28%  Similarity=0.391  Sum_probs=135.9

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCc--CcccCcCCCcccchHHhhhc-
Q 026540            2 TIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK--QFAEEIQTRQYRAPEVILRA-   78 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~--~~~~~~~~~~~~~PE~~~~~-   78 (237)
                      .+++.++..++.|++.+|.|+|..++.|+||+|+||+++.++.++|+|||++.....  ......++..|++||.+... 
T Consensus        95 ~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~  174 (283)
T cd07830          95 PFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRPPYTDYVSTRWYRAPEILLRST  174 (283)
T ss_pred             cCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCCEEEeecccceeccCCCCcCCCCCcccccCceeeecCc
Confidence            357889999999999999999999999999999999999999999999998865443  22344668889999988654 


Q ss_pred             CCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCC
Q 026540           79 GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFW  158 (237)
Q Consensus        79 ~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (237)
                      .++.++|+||+|++++++++|..||....      ..+....+.+.++.+....+...........     .........
T Consensus       175 ~~~~~~Di~s~G~~l~el~~g~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~  243 (283)
T cd07830         175 SYSSPVDIWALGCIMAELYTLRPLFPGSS------EIDQLYKICSVLGTPTKQDWPEGYKLASKLG-----FRFPQFAPT  243 (283)
T ss_pred             CcCCccchhhHHHHHHHHHhCCCccCCCC------hHHHHHHHHHhcCCCChhhhhhHhhhhcccc-----ccccccccc
Confidence            47889999999999999999999997663      4556666666766665543321111000000     000000000


Q ss_pred             chhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCc
Q 026540          159 SLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL  205 (237)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f  205 (237)
                      .....       ....+..+.+|+.+||+.+|++|||++|++.||||
T Consensus       244 ~~~~~-------~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~~~~  283 (283)
T cd07830         244 SLHQL-------IPNASPEAIDLIKDMLRWDPKKRPTASQALQHPYF  283 (283)
T ss_pred             cHHHH-------cccCCHHHHHHHHHhcccCcccCCCHHHHhhCCCC
Confidence            00000       11125678999999999999999999999999997

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=99.94  E-value=5.1e-27  Score=186.49  Aligned_cols=159  Identities=26%  Similarity=0.320  Sum_probs=125.9

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCc-----------CcccCcCCCcccc
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK-----------QFAEEIQTRQYRA   71 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~-----------~~~~~~~~~~~~~   71 (237)
                      +++..+..++.|++.+|.|+|..++.|+||+|+||+++.++.++++|||++.....           ......++..|++
T Consensus        90 ~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  169 (265)
T cd05579          90 LDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEKEDKRIVGTPDYIA  169 (265)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEEcCCCCEEEEecccchhcccCcccccccccccccCcccCccccC
Confidence            57888999999999999999999999999999999999999999999998754322           1223356778999


Q ss_pred             hHHhhhcCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccch
Q 026540           72 PEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKR  151 (237)
Q Consensus        72 PE~~~~~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (237)
                      ||.......+.++|+||+|++++++++|..||....      .......+..  +                         
T Consensus       170 Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~------~~~~~~~~~~--~-------------------------  216 (265)
T cd05579         170 PEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGET------PEEIFQNILN--G-------------------------  216 (265)
T ss_pred             HHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHhc--C-------------------------
Confidence            999988888899999999999999999999986542      1111111100  0                         


Q ss_pred             hccccCCchhHHhhhhcCCCHH--hHHHHHHHHHhccccCCCCCCCH---HHHhcCCCcCccc
Q 026540          152 IRRLKFWSLDRLLVDKYRFSET--DAREFAEFLVPLLDFTPEKRPTA---QQCLQHPWLSLRN  209 (237)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~li~~~L~~dP~~R~t~---~ell~hp~f~~~~  209 (237)
                                     ....+..  .+..+.+|+.+||+.+|.+|||+   .++++||||+..+
T Consensus       217 ---------------~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~~~~~~~~~  264 (265)
T cd05579         217 ---------------KIEWPEDVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKNHPFFKGID  264 (265)
T ss_pred             ---------------CcCCCccccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhcCccccCCC
Confidence                           0001111  26788999999999999999999   9999999998765

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=99.94  E-value=1.1e-26  Score=189.01  Aligned_cols=168  Identities=20%  Similarity=0.158  Sum_probs=127.6

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC------------------cccCc
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ------------------FAEEI   64 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~------------------~~~~~   64 (237)
                      +++..+..++.+++.||.|+|..++.|+||||+||+++.++.++++|||++......                  .....
T Consensus        98 ~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  177 (305)
T cd05609          98 LPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTTNLYEGHIEKDTREFLDKQVC  177 (305)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHEEECCCCCEEEeeCCCccccCcCccccccccccccchhhccccCCc
Confidence            567888999999999999999999999999999999999999999999987531100                  01124


Q ss_pred             CCCcccchHHhhhcCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhc
Q 026540           65 QTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFD  144 (237)
Q Consensus        65 ~~~~~~~PE~~~~~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  144 (237)
                      ++..|++||.+.+..++.++|+||+|++++++++|..||.+..      ............  .+               
T Consensus       178 ~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~------~~~~~~~~~~~~--~~---------------  234 (305)
T cd05609         178 GTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDT------PEELFGQVISDD--IE---------------  234 (305)
T ss_pred             cCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHhcc--cC---------------
Confidence            5778999999988888999999999999999999999997542      111111110000  00               


Q ss_pred             ccCccchhccccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCC---HHHHhcCCCcCcccCCcccc
Q 026540          145 RHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPT---AQQCLQHPWLSLRNSTRDET  215 (237)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t---~~ell~hp~f~~~~~~~~~~  215 (237)
                                            ........+..+.+++.+||+.+|++||+   +.++++||||...+......
T Consensus       235 ----------------------~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~~~~~~~~~~~~~~  286 (305)
T cd05609         235 ----------------------WPEGDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQHRFFLGLDWNGLLR  286 (305)
T ss_pred             ----------------------CCCccccCCHHHHHHHHHHhccChhhccCccCHHHHHhCccccCCCHHHHhh
Confidence                                  00001134677899999999999999997   79999999998776655433

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=99.94  E-value=1.1e-26  Score=184.47  Aligned_cols=160  Identities=26%  Similarity=0.301  Sum_probs=123.4

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC---cccCcCCCcccchHHhhhc
Q 026540            2 TIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ---FAEEIQTRQYRAPEVILRA   78 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~~~~PE~~~~~   78 (237)
                      .+++.++..++.|++.+|.|+|..++.|+||||+||+++.++.++++|||.+......   .....++..|++||.+...
T Consensus        97 ~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~  176 (262)
T cd06613          97 PLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILLTEDGDVKLADFGVSAQLTATIAKRKSFIGTPYWMAPEVAAVE  176 (262)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCceecCCChhhEEECCCCCEEECccccchhhhhhhhccccccCCccccCchhhccc
Confidence            3678899999999999999999999999999999999999999999999988644322   2234667889999999776


Q ss_pred             ---CCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccc
Q 026540           79 ---GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRL  155 (237)
Q Consensus        79 ---~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (237)
                         .++.++|+||+|+++++|++|..||....      ..........  ....                          
T Consensus       177 ~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~------~~~~~~~~~~--~~~~--------------------------  222 (262)
T cd06613         177 RKGGYDGKCDIWALGITAIELAELQPPMFDLH------PMRALFLISK--SNFP--------------------------  222 (262)
T ss_pred             ccCCcCchhhhHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHh--ccCC--------------------------
Confidence               78889999999999999999999997542      1111111000  0000                          


Q ss_pred             cCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCC
Q 026540          156 KFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPW  204 (237)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~  204 (237)
                               ..........+.++.+|+.+||..+|..|||+++++.|+|
T Consensus       223 ---------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~  262 (262)
T cd06613         223 ---------PPKLKDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQHPF  262 (262)
T ss_pred             ---------CccccchhhhhHHHHHHHHHHcCCChhhCCCHHHHhcCCC
Confidence                     0000112234567899999999999999999999999998

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]

Probab=99.94  E-value=4.7e-27  Score=203.44  Aligned_cols=149  Identities=21%  Similarity=0.285  Sum_probs=121.9

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhhhc--CCccCCCCCccccCCCCcEEEeecCcceecCcCc---c---------cCcCCC
Q 026540            2 TIVEKKLKRRAKRAVANISIRRASM--GGIELPKPERCLDGIDMRCKVVDFGNACRANKQF---A---------EEIQTR   67 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~~~--~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~~---~---------~~~~~~   67 (237)
                      +|+|.++++|+.++.+|+++||...  ++|||||-+|+|++.++..||||||.+.......   .         ...-|+
T Consensus       140 ~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~~g~~KLCDFGSatt~~~~~~~~~e~~~ve~eI~k~TTp  219 (738)
T KOG1989|consen  140 RLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSADGNYKLCDFGSATTKILSPTSAQEVNYVEEEIEKYTTP  219 (738)
T ss_pred             cCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcCCCCEEeCcccccccccCCCccHHHHHHHHHHHHhhCCc
Confidence            5889999999999999999999999  9999999999999999999999999985321111   0         113378


Q ss_pred             cccchHHhh---hcCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhc
Q 026540           68 QYRAPEVIL---RAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFD  144 (237)
Q Consensus        68 ~~~~PE~~~---~~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  144 (237)
                      .|++||++-   +.+.+.++|||+|||++|.++....||....                                     
T Consensus       220 ~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg-------------------------------------  262 (738)
T KOG1989|consen  220 QYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESG-------------------------------------  262 (738)
T ss_pred             cccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCc-------------------------------------
Confidence            999999986   3468999999999999999999999997652                                     


Q ss_pred             ccCccchhccccCCchhHHhhhhcCCCH--HhHHHHHHHHHhccccCCCCCCCHHHHhcC
Q 026540          145 RHGDLKRIRRLKFWSLDRLLVDKYRFSE--TDAREFAEFLVPLLDFTPEKRPTAQQCLQH  202 (237)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~li~~~L~~dP~~R~t~~ell~h  202 (237)
                                     ...++...+.+|.  ..+..+.+||..||+.||.+||.+.|++.+
T Consensus       263 ---------------~laIlng~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~  307 (738)
T KOG1989|consen  263 ---------------KLAILNGNYSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEE  307 (738)
T ss_pred             ---------------ceeEEeccccCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHH
Confidence                           1122233344433  568899999999999999999999998873

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=99.94  E-value=1.6e-26  Score=183.66  Aligned_cols=156  Identities=22%  Similarity=0.289  Sum_probs=124.2

Q ss_pred             hhHHHHHHHHHHHHhhhhhhh-----hhcCCccCCCCCccccCCCCcEEEeecCcceecCcC---cccCcCCCcccchHH
Q 026540            3 IVEKKLKRRAKRAVANISIRR-----ASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ---FAEEIQTRQYRAPEV   74 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~-----~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~~~~PE~   74 (237)
                      +++.++..++.|++.+|.++|     ..+++|+||||+||+++.++.++++|||++......   .....++..|++||.
T Consensus       102 l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~pE~  181 (265)
T cd08217         102 IEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKILGHDSSFAKTYVGTPYYMSPEQ  181 (265)
T ss_pred             CCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEecccccccccCCcccccccccCCCccChhh
Confidence            567889999999999999999     999999999999999999999999999988654322   223467889999999


Q ss_pred             hhhcCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcc
Q 026540           75 ILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRR  154 (237)
Q Consensus        75 ~~~~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (237)
                      +....++.++|+||+|++++++++|..||....      .......+..    .                          
T Consensus       182 ~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~------~~~~~~~~~~----~--------------------------  225 (265)
T cd08217         182 LNHMSYDEKSDIWSLGCLIYELCALSPPFTARN------QLQLASKIKE----G--------------------------  225 (265)
T ss_pred             hcCCCCCchhHHHHHHHHHHHHHHCCCcccCcC------HHHHHHHHhc----C--------------------------
Confidence            988888999999999999999999999986542      1111111000    0                          


Q ss_pred             ccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCc
Q 026540          155 LKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL  205 (237)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f  205 (237)
                                 .....+...+..+.+++.+||+.+|.+||+++++++|||+
T Consensus       226 -----------~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~~~~  265 (265)
T cd08217         226 -----------KFRRIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQLPLI  265 (265)
T ss_pred             -----------CCCCCccccCHHHHHHHHHHccCCcccCCCHHHHhhCCCC
Confidence                       0001223446788999999999999999999999999996

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=99.94  E-value=1.1e-26  Score=191.51  Aligned_cols=155  Identities=19%  Similarity=0.229  Sum_probs=119.2

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC-----cccCcCCCcccchHHhh
Q 026540            2 TIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ-----FAEEIQTRQYRAPEVIL   76 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~-----~~~~~~~~~~~~PE~~~   76 (237)
                      .+++..+.+++.|++.||.|+|..+++||||||+||+++.++.++|+|||++......     .....++..|+|||++.
T Consensus       169 ~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~  248 (337)
T cd05054         169 PLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPESIF  248 (337)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCccccCcHHhc
Confidence            3677889999999999999999999999999999999999999999999998654211     11223456799999999


Q ss_pred             hcCCCchhhhhhhhhHHHHHhc-CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccc
Q 026540           77 RAGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRL  155 (237)
Q Consensus        77 ~~~~~~~~diws~g~~l~~~~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (237)
                      +..++.++|+||+||+++++++ |..||.+..     ........+...                               
T Consensus       249 ~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~-----~~~~~~~~~~~~-------------------------------  292 (337)
T cd05054         249 DKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQ-----IDEEFCRRLKEG-------------------------------  292 (337)
T ss_pred             CCCCCccccHHHHHHHHHHHHHcCCCCCCCCC-----ccHHHHHHHhcc-------------------------------
Confidence            9999999999999999999997 988886532     111110000000                               


Q ss_pred             cCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcC
Q 026540          156 KFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQH  202 (237)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h  202 (237)
                                .....+...+..+.+++.+||+.+|++||+++|+++|
T Consensus       293 ----------~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~ell~~  329 (337)
T cd05054         293 ----------TRMRAPEYATPEIYSIMLDCWHNNPEDRPTFSELVEI  329 (337)
T ss_pred             ----------CCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence                      0001122345678999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=99.94  E-value=1.3e-26  Score=185.04  Aligned_cols=157  Identities=25%  Similarity=0.322  Sum_probs=119.9

Q ss_pred             hHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCC-CCcEEEeecCcceecCc---CcccCcCCCcccchHHhhhcC
Q 026540            4 VEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGI-DMRCKVVDFGNACRANK---QFAEEIQTRQYRAPEVILRAG   79 (237)
Q Consensus         4 ~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~-~~~~kl~dfg~~~~~~~---~~~~~~~~~~~~~PE~~~~~~   79 (237)
                      .+..+..++.|++.||.|+|..++.|+|+||+||+++. ++.++|+|||.+.....   ......++..|++||.+....
T Consensus       106 ~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~  185 (268)
T cd06624         106 NEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGINPCTETFTGTLQYMAPEVIDKGP  185 (268)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCeEEEecchhheecccCCCccccCCCCccccChhhhcccc
Confidence            56778889999999999999999999999999999986 67999999998754321   122335678999999987643


Q ss_pred             --CCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccC
Q 026540           80 --YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKF  157 (237)
Q Consensus        80 --~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (237)
                        ++.++|+||+|++++++++|..||.....     ........                                    
T Consensus       186 ~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~-----~~~~~~~~------------------------------------  224 (268)
T cd06624         186 RGYGAPADIWSLGCTIVEMATGKPPFIELGE-----PQAAMFKV------------------------------------  224 (268)
T ss_pred             ccCCchhhhHHHHHHHHHHHhCCCCCccccC-----hhhhHhhh------------------------------------
Confidence              78899999999999999999999864320     00000000                                    


Q ss_pred             CchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCc
Q 026540          158 WSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL  205 (237)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f  205 (237)
                          .........+...+.++.+|+.+||+.+|.+|||+.|++.||||
T Consensus       225 ----~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~  268 (268)
T cd06624         225 ----GMFKIHPEIPESLSAEAKNFILRCFEPDPDKRASAHDLLQDPFL  268 (268)
T ss_pred             ----hhhccCCCCCcccCHHHHHHHHHHcCCCchhCCCHHHHHhCCCC
Confidence                00000111233456788999999999999999999999999997

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=99.94  E-value=1.6e-26  Score=185.84  Aligned_cols=153  Identities=16%  Similarity=0.242  Sum_probs=120.3

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC-----cccCcCCCcccchHHhhh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ-----FAEEIQTRQYRAPEVILR   77 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~-----~~~~~~~~~~~~PE~~~~   77 (237)
                      +++.++..++.|++.||+|+|..++.|+||||+||+++.++.++|+|||++......     .....++..|+|||.+.+
T Consensus       121 l~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nil~~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  200 (283)
T cd05048         121 LDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLVGEGLTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILY  200 (283)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCeeccccccceEEEcCCCcEEECCCcceeeccccccccccCCCcccccccCHHHhcc
Confidence            567788999999999999999999999999999999999999999999998653221     123345678999999988


Q ss_pred             cCCCchhhhhhhhhHHHHHhc-CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcccc
Q 026540           78 AGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLK  156 (237)
Q Consensus        78 ~~~~~~~diws~g~~l~~~~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (237)
                      ..++.++|+||+|++++++++ |..||.+..      ..+....+..  +                              
T Consensus       201 ~~~~~~sDv~slG~il~el~~~g~~p~~~~~------~~~~~~~i~~--~------------------------------  242 (283)
T cd05048         201 GKFTTESDIWSFGVVLWEIFSYGLQPYYGFS------NQEVIEMIRS--R------------------------------  242 (283)
T ss_pred             CcCchhhhHHHHHHHHHHHHcCCCCCCCCCC------HHHHHHHHHc--C------------------------------
Confidence            889999999999999999997 888987653      1111111100  0                              


Q ss_pred             CCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcC
Q 026540          157 FWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQH  202 (237)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h  202 (237)
                               .....+..++..+.+|+.+||+.||.+||++.+++++
T Consensus       243 ---------~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~  279 (283)
T cd05048         243 ---------QLLPCPEDCPARVYALMIECWNEIPARRPRFKDIHTR  279 (283)
T ss_pred             ---------CcCCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence                     0011234457889999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=99.94  E-value=1e-26  Score=185.49  Aligned_cols=159  Identities=24%  Similarity=0.255  Sum_probs=119.8

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC---cccCcCCCcccchHHhhh--
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ---FAEEIQTRQYRAPEVILR--   77 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~~~~PE~~~~--   77 (237)
                      +++.++..++.|++.++.|+|..++.|+|+||+||+++.++.++++|||++......   .....++..|++||.+..  
T Consensus       103 ~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~  182 (267)
T cd06646         103 LSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILLTDNGDVKLADFGVAAKITATIAKRKSFIGTPYWMAPEVAAVEK  182 (267)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEECcCccceeecccccccCccccCccccCHhHccccc
Confidence            567889999999999999999999999999999999999999999999998654322   223456789999999853  


Q ss_pred             -cCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcccc
Q 026540           78 -AGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLK  156 (237)
Q Consensus        78 -~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (237)
                       ..++.++|+||+|++++++++|..||......      .....+..                       ..        
T Consensus       183 ~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~------~~~~~~~~-----------------------~~--------  225 (267)
T cd06646         183 NGGYNQLCDIWAVGITAIELAELQPPMFDLHPM------RALFLMSK-----------------------SN--------  225 (267)
T ss_pred             CCCCcchhhHHHHHHHHHHHHhCCCCccccchh------hhheeeec-----------------------CC--------
Confidence             34778999999999999999999988643200      00000000                       00        


Q ss_pred             CCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCC
Q 026540          157 FWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPW  204 (237)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~  204 (237)
                            ............+..+.+|+.+||..+|++|||++++++|+|
T Consensus       226 ------~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l~  267 (267)
T cd06646         226 ------FQPPKLKDKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHLF  267 (267)
T ss_pred             ------CCCCCCccccccCHHHHHHHHHHhhCChhhCcCHHHHhcCCC
Confidence                  000000011223568899999999999999999999999987

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=99.94  E-value=1.8e-26  Score=185.78  Aligned_cols=158  Identities=25%  Similarity=0.287  Sum_probs=120.8

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCc---CcccCcCCCcccchHHhhh--
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK---QFAEEIQTRQYRAPEVILR--   77 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~---~~~~~~~~~~~~~PE~~~~--   77 (237)
                      +.+..+..++.|++.+|.|+|..++.|+|+||+||+++.++.++++|||++.....   ......++..|++||.+..  
T Consensus       121 ~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  200 (286)
T cd06638         121 MEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQ  200 (286)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHhCCccccCCCHHhEEECCCCCEEEccCCceeecccCCCccccccCCCcccChhhhchhh
Confidence            56778889999999999999999999999999999999999999999999865432   2223467889999999853  


Q ss_pred             ---cCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcc
Q 026540           78 ---AGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRR  154 (237)
Q Consensus        78 ---~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (237)
                         ..++.++|+||+|++++++++|..||....      ....+   .......                          
T Consensus       201 ~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~------~~~~~---~~~~~~~--------------------------  245 (286)
T cd06638         201 QLDSTYDARCDVWSLGITAIELGDGDPPLADLH------PMRAL---FKIPRNP--------------------------  245 (286)
T ss_pred             hccccccchhhhhhHHHHHHHHhcCCCCCCCCc------hhHHH---hhccccC--------------------------
Confidence               347889999999999999999999986542      10100   0000000                          


Q ss_pred             ccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCc
Q 026540          155 LKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL  205 (237)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f  205 (237)
                                ......+...+..+.+++.+||+.||.+|||++++++|+||
T Consensus       246 ----------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~~~~  286 (286)
T cd06638         246 ----------PPTLHQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHVFI  286 (286)
T ss_pred             ----------CCcccCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhcccC
Confidence                      00001122234678899999999999999999999999997

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=99.94  E-value=3.1e-26  Score=182.61  Aligned_cols=161  Identities=23%  Similarity=0.344  Sum_probs=124.1

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCC-cEEEeecCcceecCcCc-------ccCcCCCcccchHH
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDM-RCKVVDFGNACRANKQF-------AEEIQTRQYRAPEV   74 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~-~~kl~dfg~~~~~~~~~-------~~~~~~~~~~~PE~   74 (237)
                      +++..+..++.|++.||.|+|..+++|+||||+||+++.++ .++|+|||.+.......       ....++..|++||.
T Consensus       100 ~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~  179 (268)
T cd06630         100 FKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLIDSTGQRLRIADFGAAARLAAKGTGAGEFQGQLLGTIAFMAPEV  179 (268)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEcccccccccccccccCCccccccccccceeCHhH
Confidence            56788999999999999999999999999999999998765 69999999886543221       12356788999999


Q ss_pred             hhhcCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcc
Q 026540           75 ILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRR  154 (237)
Q Consensus        75 ~~~~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (237)
                      +.+..++.++|+||+|++++++++|..||......      .....+.+...                            
T Consensus       180 ~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~------~~~~~~~~~~~----------------------------  225 (268)
T cd06630         180 LRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHS------NHLALIFKIAS----------------------------  225 (268)
T ss_pred             hccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCc------chHHHHHHHhc----------------------------
Confidence            98878899999999999999999999998644211      11111111000                            


Q ss_pred             ccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcC
Q 026540          155 LKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLS  206 (237)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~  206 (237)
                               .......+...+..+.+++.+||..+|.+|||+.++++||||.
T Consensus       226 ---------~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~~~~~~  268 (268)
T cd06630         226 ---------ATTAPSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLKHPVFR  268 (268)
T ss_pred             ---------cCCCCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhcCcccC
Confidence                     0001123344567899999999999999999999999999985

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=99.94  E-value=1.1e-26  Score=208.61  Aligned_cols=161  Identities=20%  Similarity=0.326  Sum_probs=122.7

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhc-------CCccCCCCCccccCC-----------------CCcEEEeecCcceecCc
Q 026540            3 IVEKKLKRRAKRAVANISIRRASM-------GGIELPKPERCLDGI-----------------DMRCKVVDFGNACRANK   58 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~-------~~h~d~kp~Nili~~-----------------~~~~kl~dfg~~~~~~~   58 (237)
                      |++..+..++.||+.||.|+|..+       |+||||||+|||++.                 ...+||+|||++.....
T Consensus       115 L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~  194 (1021)
T PTZ00266        115 IEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITAQANNLNGRPIAKIGDFGLSKNIGI  194 (1021)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccccccccccccCCCCceEEccCCccccccc
Confidence            678899999999999999999854       999999999999954                 23589999999865432


Q ss_pred             C--cccCcCCCcccchHHhhhc--CCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHh
Q 026540           59 Q--FAEEIQTRQYRAPEVILRA--GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAI  134 (237)
Q Consensus        59 ~--~~~~~~~~~~~~PE~~~~~--~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  134 (237)
                      .  .....+++.|+|||++.+.  .++.++|+|||||++|+|++|..||....      ....+   ...+...+.    
T Consensus       195 ~s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~------~~~ql---i~~lk~~p~----  261 (1021)
T PTZ00266        195 ESMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKAN------NFSQL---ISELKRGPD----  261 (1021)
T ss_pred             cccccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCC------cHHHH---HHHHhcCCC----
Confidence            2  2344689999999999754  47899999999999999999999996442      11111   111100000    


Q ss_pred             cCCCchhhhcccCccchhccccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccC
Q 026540          135 GGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNS  210 (237)
Q Consensus       135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~  210 (237)
                                                        ......+..+.+||..||..+|.+||++.|+|.|+|+.....
T Consensus       262 ----------------------------------lpi~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h~~ik~i~~  303 (1021)
T PTZ00266        262 ----------------------------------LPIKGKSKELNILIKNLLNLSAKERPSALQCLGYQIIKNVGP  303 (1021)
T ss_pred             ----------------------------------CCcCCCCHHHHHHHHHHhcCChhHCcCHHHHhccHHHhhcCC
Confidence                                              001123567889999999999999999999999999985543

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=99.94  E-value=2.9e-26  Score=183.98  Aligned_cols=162  Identities=23%  Similarity=0.275  Sum_probs=127.3

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCc---CcccCcCCCcccchHHhhhcC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK---QFAEEIQTRQYRAPEVILRAG   79 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~---~~~~~~~~~~~~~PE~~~~~~   79 (237)
                      +++.++..++.+++.++.++|..+++|+||+|+||+++.++.++++|||++.....   ......++..|++||.+.+..
T Consensus        98 l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~  177 (277)
T cd06640          98 FDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSA  177 (277)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCccCcCCChhhEEEcCCCCEEEcccccceeccCCccccccccCcccccCHhHhccCC
Confidence            46778889999999999999999999999999999999999999999998854432   122335677899999998888


Q ss_pred             CCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCc
Q 026540           80 YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWS  159 (237)
Q Consensus        80 ~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (237)
                      ++.++|+||+|++++++++|..||....      .......+   ..                                 
T Consensus       178 ~~~~~Dv~slG~il~el~tg~~p~~~~~------~~~~~~~~---~~---------------------------------  215 (277)
T cd06640         178 YDSKADIWSLGITAIELAKGEPPNSDMH------PMRVLFLI---PK---------------------------------  215 (277)
T ss_pred             CccHHHHHHHHHHHHHHHHCCCCCCCcC------hHhHhhhh---hc---------------------------------
Confidence            8999999999999999999999986542      11000000   00                                 


Q ss_pred             hhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccCC
Q 026540          160 LDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNST  211 (237)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~~  211 (237)
                           ..........+..+.+++.+||+.+|++||+++++++|+||.....+
T Consensus       216 -----~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~~  262 (277)
T cd06640         216 -----NNPPTLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKHKFIVKNAKK  262 (277)
T ss_pred             -----CCCCCCchhhhHHHHHHHHHHcccCcccCcCHHHHHhChHhhhcchh
Confidence                 00011233456788999999999999999999999999999866543

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=99.94  E-value=1.7e-26  Score=192.91  Aligned_cols=153  Identities=17%  Similarity=0.190  Sum_probs=117.1

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcCcc-----cCcCCCcccchHHhhh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQFA-----EEIQTRQYRAPEVILR   77 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~~~-----~~~~~~~~~~PE~~~~   77 (237)
                      +++.++.+++.|++.||.|+|+.+++||||||+||+++.++.++|+|||++........     ...++..|+|||++.+
T Consensus       209 l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  288 (374)
T cd05106         209 LDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFD  288 (374)
T ss_pred             cCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeeccCCCCccceeCHHHhcC
Confidence            57788999999999999999999999999999999999999999999999865432111     1123457999999988


Q ss_pred             cCCCchhhhhhhhhHHHHHhc-CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcccc
Q 026540           78 AGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLK  156 (237)
Q Consensus        78 ~~~~~~~diws~g~~l~~~~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (237)
                      ..++.++|+||+|++++++++ |..||....     .. .........  .                             
T Consensus       289 ~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~-----~~-~~~~~~~~~--~-----------------------------  331 (374)
T cd05106         289 CVYTVQSDVWSYGILLWEIFSLGKSPYPGIL-----VN-SKFYKMVKR--G-----------------------------  331 (374)
T ss_pred             CCCCccccHHHHHHHHHHHHhCCCCCCcccc-----cc-HHHHHHHHc--c-----------------------------
Confidence            889999999999999999996 999986542     01 011000000  0                             


Q ss_pred             CCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhc
Q 026540          157 FWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ  201 (237)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  201 (237)
                               .....+...+.++.+++.+||+.||.+|||+.++++
T Consensus       332 ---------~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~l~~  367 (374)
T cd05106         332 ---------YQMSRPDFAPPEIYSIMKMCWNLEPTERPTFSQISQ  367 (374)
T ss_pred             ---------cCccCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence                     000112223578899999999999999999999875

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=99.94  E-value=4.5e-26  Score=183.80  Aligned_cols=173  Identities=25%  Similarity=0.327  Sum_probs=127.1

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC-cccCcCCCcccchHHhhhcCCC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ-FAEEIQTRQYRAPEVILRAGYS   81 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~-~~~~~~~~~~~~PE~~~~~~~~   81 (237)
                      +++..+..++.|++.+|.|+|..++.|+|++|+||+++.++.++++|||++...... .....++..|++||.+.+..++
T Consensus       102 l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~  181 (287)
T cd06621         102 IGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILLTRKGQVKLCDFGVSGELVNSLAGTFTGTSFYMAPERIQGKPYS  181 (287)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecCCeEEEeeccccccccccccccccCCccccCHHHhcCCCCC
Confidence            567788899999999999999999999999999999999999999999987543322 2234567789999999888899


Q ss_pred             chhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCchh
Q 026540           82 FSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLD  161 (237)
Q Consensus        82 ~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (237)
                      .++|+||+|++++++++|..||.....+ ....   .+............                              
T Consensus       182 ~~~Dv~slG~il~~l~~g~~p~~~~~~~-~~~~---~~~~~~~~~~~~~~------------------------------  227 (287)
T cd06621         182 ITSDVWSLGLTLLEVAQNRFPFPPEGEP-PLGP---IELLSYIVNMPNPE------------------------------  227 (287)
T ss_pred             chhhHHHHHHHHHHHHhCCCCCCcccCC-CCCh---HHHHHHHhcCCchh------------------------------
Confidence            9999999999999999999999755321 0011   11111111000000                              


Q ss_pred             HHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccCC
Q 026540          162 RLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNST  211 (237)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~~  211 (237)
                        ...........+..+.+|+.+||..+|.+|||+.|+++||||+....+
T Consensus       228 --~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~~~~~~~~~~  275 (287)
T cd06621         228 --LKDEPGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEHPWIKAQMKK  275 (287)
T ss_pred             --hccCCCCCCchHHHHHHHHHHHcCCCcccCCCHHHHHhCccccccccc
Confidence              000000001235678899999999999999999999999999655443

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=99.94  E-value=1.9e-26  Score=182.73  Aligned_cols=156  Identities=18%  Similarity=0.232  Sum_probs=124.1

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC---cccCcCCCcccchHHhhhcC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ---FAEEIQTRQYRAPEVILRAG   79 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~~~~PE~~~~~~   79 (237)
                      +++.++.+++.|++.++.|+|..++.|+||+|+||+++.++.++++|||.+......   .....++..|++||.+.+..
T Consensus        98 ~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~  177 (256)
T cd08218          98 FPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVELARTCIGTPYYLSPEICENRP  177 (256)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEEeeccceeecCcchhhhhhccCCccccCHHHhCCCC
Confidence            567888999999999999999999999999999999999999999999988654332   12335678899999998888


Q ss_pred             CCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCc
Q 026540           80 YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWS  159 (237)
Q Consensus        80 ~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (237)
                      ++.++|+||+|++++++++|..||....      .......+.  .+.                                
T Consensus       178 ~~~~~Dv~slG~i~~~l~~g~~~~~~~~------~~~~~~~~~--~~~--------------------------------  217 (256)
T cd08218         178 YNNKSDIWALGCVLYEMCTLKHAFEAGN------MKNLVLKII--RGS--------------------------------  217 (256)
T ss_pred             CCCccchhHHHHHHHHHHcCCCCccCCC------HHHHHHHHh--cCC--------------------------------
Confidence            8899999999999999999999886432      111111110  000                                


Q ss_pred             hhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCc
Q 026540          160 LDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL  205 (237)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f  205 (237)
                             ....+...+..+.+++.+||+.+|.+||++.++++||||
T Consensus       218 -------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~~~~~  256 (256)
T cd08218         218 -------YPPVSSHYSYDLRNLVSQLFKRNPRDRPSVNSILEKNFI  256 (256)
T ss_pred             -------CCCCcccCCHHHHHHHHHHhhCChhhCcCHHHHhhCcCC
Confidence                   001233446778999999999999999999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=99.94  E-value=3.1e-26  Score=182.53  Aligned_cols=157  Identities=21%  Similarity=0.313  Sum_probs=122.5

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCc------CcccCcCCCcccchHHhh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK------QFAEEIQTRQYRAPEVIL   76 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~------~~~~~~~~~~~~~PE~~~   76 (237)
                      +++..+..++.|++.+|.++|..++.|+||||+||+++.++.++|+|||.+.....      ......++..|++||.+.
T Consensus       103 ~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  182 (265)
T cd06652         103 LTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILRDSVGNVKLGDFGASKRLQTICLSGTGMKSVTGTPYWMSPEVIS  182 (265)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEecCCCCEEECcCccccccccccccccccccCCCCccccChhhhc
Confidence            56788899999999999999999999999999999999999999999998864321      122345778899999998


Q ss_pred             hcCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcccc
Q 026540           77 RAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLK  156 (237)
Q Consensus        77 ~~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (237)
                      +..++.++|+||+|++++++++|..||....      .   .....+......                           
T Consensus       183 ~~~~~~~~Dv~slG~il~el~~g~~p~~~~~------~---~~~~~~~~~~~~---------------------------  226 (265)
T cd06652         183 GEGYGRKADIWSVGCTVVEMLTEKPPWAEFE------A---MAAIFKIATQPT---------------------------  226 (265)
T ss_pred             CCCCCcchhHHHHHHHHHHHhhCCCCCCccc------h---HHHHHHHhcCCC---------------------------
Confidence            8888999999999999999999999986431      1   111111110000                           


Q ss_pred             CCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcC
Q 026540          157 FWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLS  206 (237)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~  206 (237)
                                ....+...+..+.+++.+|+. +|++||+++++++|||+.
T Consensus       227 ----------~~~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~~~~~~  265 (265)
T cd06652         227 ----------NPVLPPHVSDHCRDFLKRIFV-EAKLRPSADELLRHTFVH  265 (265)
T ss_pred             ----------CCCCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhcCcccC
Confidence                      011233456778899999984 999999999999999984

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=99.94  E-value=1.1e-26  Score=186.35  Aligned_cols=162  Identities=23%  Similarity=0.299  Sum_probs=126.5

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC---cccCcCCCcccchHHhhhcC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ---FAEEIQTRQYRAPEVILRAG   79 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~~~~PE~~~~~~   79 (237)
                      +++..+..++.+++.++.|+|..++.|+||+|+||+++.++.++++|||++......   .....++..|++||.+.+..
T Consensus        98 ~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  177 (277)
T cd06642          98 LEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSA  177 (277)
T ss_pred             CCHHHHHHHHHHHHHHHHHHhcCCeeccCCChheEEEeCCCCEEEccccccccccCcchhhhcccCcccccCHHHhCcCC
Confidence            567888999999999999999999999999999999999999999999988654321   12335678899999998888


Q ss_pred             CCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCc
Q 026540           80 YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWS  159 (237)
Q Consensus        80 ~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (237)
                      ++.++|+||+|++++++++|..||....      .......   ....                                
T Consensus       178 ~~~~~Dv~slG~il~el~tg~~p~~~~~------~~~~~~~---~~~~--------------------------------  216 (277)
T cd06642         178 YDFKADIWSLGITAIELAKGEPPNSDLH------PMRVLFL---IPKN--------------------------------  216 (277)
T ss_pred             CchhhhHHHHHHHHHHHHhCCCCCcccc------hhhHHhh---hhcC--------------------------------
Confidence            8999999999999999999999886432      1000000   0000                                


Q ss_pred             hhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccCC
Q 026540          160 LDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNST  211 (237)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~~  211 (237)
                            .........+..+.+++.+||+.+|.+||++.++++||||..+...
T Consensus       217 ------~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~~  262 (277)
T cd06642         217 ------SPPTLEGQYSKPFKEFVEACLNKDPRFRPTAKELLKHKFITRYTKK  262 (277)
T ss_pred             ------CCCCCCcccCHHHHHHHHHHccCCcccCcCHHHHHHhHHHHHHhhh
Confidence                  0001122345678899999999999999999999999999866543

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=99.93  E-value=4.9e-26  Score=185.03  Aligned_cols=159  Identities=16%  Similarity=0.179  Sum_probs=116.4

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC-----cccCcCCCcccchHHhhh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ-----FAEEIQTRQYRAPEVILR   77 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~-----~~~~~~~~~~~~PE~~~~   77 (237)
                      ++...+.+++.|++.||.|+|..+++||||||+|||++.++.+||+|||++......     .....++..|+|||++..
T Consensus       135 ~~~~~~~~i~~~i~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  214 (304)
T cd05096         135 ISYSSLLHVALQIASGMKYLSSLNFVHRDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILM  214 (304)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHCCccccCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhc
Confidence            456778899999999999999999999999999999999999999999998654321     112234678999999988


Q ss_pred             cCCCchhhhhhhhhHHHHHhc--CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccc
Q 026540           78 AGYSFSVDMWSFACTAFELAT--GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRL  155 (237)
Q Consensus        78 ~~~~~~~diws~g~~l~~~~~--g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (237)
                      ..++.++|+||+|++++++++  +..||....      ...........+.....                         
T Consensus       215 ~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~------~~~~~~~~~~~~~~~~~-------------------------  263 (304)
T cd05096         215 GKFTTASDVWAFGVTLWEILMLCKEQPYGELT------DEQVIENAGEFFRDQGR-------------------------  263 (304)
T ss_pred             CCCCchhhhHHHHHHHHHHHHccCCCCCCcCC------HHHHHHHHHHHhhhccc-------------------------
Confidence            889999999999999999986  456665432      22222211111100000                         


Q ss_pred             cCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhc
Q 026540          156 KFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ  201 (237)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  201 (237)
                               ......+..++..+.+|+.+||..||++|||+.++.+
T Consensus       264 ---------~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~  300 (304)
T cd05096         264 ---------QVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHA  300 (304)
T ss_pred             ---------cccccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHH
Confidence                     0000112344678899999999999999999999853

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=99.93  E-value=3.6e-26  Score=184.91  Aligned_cols=163  Identities=24%  Similarity=0.330  Sum_probs=126.6

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC---cccCcCCCcccchHHhhhcC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ---FAEEIQTRQYRAPEVILRAG   79 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~~~~PE~~~~~~   79 (237)
                      +++..+..++.|++.++.|+|..+++|+|++|+||+++.++.++++|||++......   .....++..|++||.+.+..
T Consensus       113 ~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~  192 (292)
T cd06657         113 MNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELISRLP  192 (292)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEcccccceecccccccccccccCccccCHHHhcCCC
Confidence            467888999999999999999999999999999999999999999999987544321   22345678899999988777


Q ss_pred             CCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCc
Q 026540           80 YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWS  159 (237)
Q Consensus        80 ~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (237)
                      ++.++|+||+|++++++++|..||.+..      .......+...   .+                              
T Consensus       193 ~~~~~Dv~slGvil~el~tg~~p~~~~~------~~~~~~~~~~~---~~------------------------------  233 (292)
T cd06657         193 YGPEVDIWSLGIMVIEMVDGEPPYFNEP------PLKAMKMIRDN---LP------------------------------  233 (292)
T ss_pred             CCchhhHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHhh---CC------------------------------
Confidence            8899999999999999999999987542      11111111100   00                              


Q ss_pred             hhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccC
Q 026540          160 LDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNS  210 (237)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~  210 (237)
                            .........+..+.+++.+||+.+|.+||+++++++||||.....
T Consensus       234 ------~~~~~~~~~~~~l~~li~~~l~~~P~~R~~~~~ll~~~~~~~~~~  278 (292)
T cd06657         234 ------PKLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGP  278 (292)
T ss_pred             ------cccCCcccCCHHHHHHHHHHHhCCcccCcCHHHHhcChHHhccCC
Confidence                  000011223567789999999999999999999999999997663

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=99.93  E-value=1.5e-26  Score=187.43  Aligned_cols=167  Identities=23%  Similarity=0.304  Sum_probs=125.2

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhh-hcCCccCCCCCccccCCCCcEEEeecCcceecCcC--cccCcCCCcccchHHhhhcC
Q 026540            3 IVEKKLKRRAKRAVANISIRRA-SMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ--FAEEIQTRQYRAPEVILRAG   79 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~-~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~--~~~~~~~~~~~~PE~~~~~~   79 (237)
                      +++..+..++.+++.+++|+|. .+++|+||+|+||+++.++.++|+|||.+......  .....++..|++||.+....
T Consensus       111 l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  190 (296)
T cd06618         111 IPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLDASGNVKLCDFGISGRLVDSKAKTRSAGCAAYMAPERIDPPD  190 (296)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEcCCCCEEECccccchhccCCCcccCCCCCccccCHhhcCCCC
Confidence            5678888999999999999997 58999999999999999999999999988654322  22335677899999987543


Q ss_pred             ----CCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccc
Q 026540           80 ----YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRL  155 (237)
Q Consensus        80 ----~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (237)
                          ++.++|+||+|++++++++|+.||....     ..   .+...+.......                         
T Consensus       191 ~~~~~~~~~Di~slG~il~el~~g~~p~~~~~-----~~---~~~~~~~~~~~~~-------------------------  237 (296)
T cd06618         191 PNPKYDIRADVWSLGISLVELATGQFPYKNCK-----TE---FEVLTKILQEEPP-------------------------  237 (296)
T ss_pred             CccccccchhHHHHHHHHHHHHhCCCCCCcch-----hH---HHHHHHHhcCCCC-------------------------
Confidence                7789999999999999999999986431     11   1111111110000                         


Q ss_pred             cCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccCCcc
Q 026540          156 KFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNSTRD  213 (237)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~~~~  213 (237)
                                 ........+.++.+|+.+||..||.+||+++++++|+||........
T Consensus       238 -----------~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~~~~  284 (296)
T cd06618         238 -----------SLPPNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQHPFIRRYETAEV  284 (296)
T ss_pred             -----------CCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcChhhhccchhHH
Confidence                       00001123567899999999999999999999999999997664443

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=99.93  E-value=3.3e-26  Score=185.47  Aligned_cols=153  Identities=15%  Similarity=0.156  Sum_probs=117.7

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcCccc--CcCCCcccchHHhhhcCC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQFAE--EIQTRQYRAPEVILRAGY   80 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~~~~--~~~~~~~~~PE~~~~~~~   80 (237)
                      ++++++..++.|++.||.|+|..+++|+||||+||+++.++.++|+|||++.........  ...+..|++||.+.+..+
T Consensus       116 l~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  195 (297)
T cd05089         116 LTSQQLLQFASDVATGMQYLSEKQFIHRDLAARNVLVGENLASKIADFGLSRGEEVYVKKTMGRLPVRWMAIESLNYSVY  195 (297)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCcccCcCCcceEEECCCCeEEECCcCCCccccceeccCCCCcCccccCchhhccCCC
Confidence            567889999999999999999999999999999999999999999999987543221111  122456999999988889


Q ss_pred             CchhhhhhhhhHHHHHhc-CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCc
Q 026540           81 SFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWS  159 (237)
Q Consensus        81 ~~~~diws~g~~l~~~~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (237)
                      +.++|+||+|++++++++ |..||....      ...........                                   
T Consensus       196 ~~~~DvwSlG~il~el~t~g~~pf~~~~------~~~~~~~~~~~-----------------------------------  234 (297)
T cd05089         196 TTKSDVWSFGVLLWEIVSLGGTPYCGMT------CAELYEKLPQG-----------------------------------  234 (297)
T ss_pred             CchhhHHHHHHHHHHHHcCCCCCCCCCC------HHHHHHHHhcC-----------------------------------
Confidence            999999999999999997 989986542      11111110000                                   


Q ss_pred             hhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcC
Q 026540          160 LDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQH  202 (237)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h  202 (237)
                            .....+..++..+.+|+.+||+.+|.+|||++++++.
T Consensus       235 ------~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~  271 (297)
T cd05089         235 ------YRMEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQ  271 (297)
T ss_pred             ------CCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence                  0001123346788999999999999999999999764

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=99.93  E-value=3.8e-26  Score=183.70  Aligned_cols=153  Identities=12%  Similarity=0.195  Sum_probs=118.6

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC-----cccCcCCCcccchHHhhh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ-----FAEEIQTRQYRAPEVILR   77 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~-----~~~~~~~~~~~~PE~~~~   77 (237)
                      +.+..+..++.|++.||.|+|..++.||||||+||+++.++.+||+|||++......     .....+++.|+|||.+..
T Consensus       121 ~~~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  200 (283)
T cd05091         121 LEPADFVHIVTQIAAGMEFLSSHHVVHKDLATRNVLVFDKLNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMY  200 (283)
T ss_pred             cCHHHHHHHHHHHHHHHHHHHHcCccccccchhheEecCCCceEecccccccccccchheeeccCccCCccccCHHHHhc
Confidence            566778899999999999999999999999999999999999999999987643221     122344678999999988


Q ss_pred             cCCCchhhhhhhhhHHHHHhc-CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcccc
Q 026540           78 AGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLK  156 (237)
Q Consensus        78 ~~~~~~~diws~g~~l~~~~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (237)
                      ..++.++|+||+|++++++++ |..||.+..      .......+...                                
T Consensus       201 ~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~------~~~~~~~i~~~--------------------------------  242 (283)
T cd05091         201 GKFSIDSDIWSYGVVLWEVFSYGLQPYCGYS------NQDVIEMIRNR--------------------------------  242 (283)
T ss_pred             CCCCcchhHHHHHHHHHHHHcCCCCCCCCCC------HHHHHHHHHcC--------------------------------
Confidence            889999999999999999997 777876542      21111111100                                


Q ss_pred             CCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcC
Q 026540          157 FWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQH  202 (237)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h  202 (237)
                               .....+..++..+.+|+..||+.+|.+||++.++++.
T Consensus       243 ---------~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~  279 (283)
T cd05091         243 ---------QVLPCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSR  279 (283)
T ss_pred             ---------CcCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHH
Confidence                     0011233456778999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.93  E-value=1.3e-26  Score=200.19  Aligned_cols=152  Identities=16%  Similarity=0.282  Sum_probs=127.8

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceec-CcCcccC----cCCCcccchHHhhh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRA-NKQFAEE----IQTRQYRAPEVILR   77 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~-~~~~~~~----~~~~~~~~PE~~~~   77 (237)
                      |+..+.+.+|.||++|+.||-+++.+||||-..|+||+.+..|||+|||+++.. +..+...    .-++.||+||.++.
T Consensus       600 L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLATRNCLVge~l~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly  679 (774)
T KOG1026|consen  600 LSTSQFLHIATQIAAGMEYLSSHHFVHRDLATRNCLVGENLVVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILY  679 (774)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCcccccchhhhhceeccceEEEecccccchhhhhhhhhcccCCceeeeecCCHHHhhc
Confidence            678899999999999999999999999999999999999999999999999753 3333222    22578999999999


Q ss_pred             cCCCchhhhhhhhhHHHHHhc-CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcccc
Q 026540           78 AGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLK  156 (237)
Q Consensus        78 ~~~~~~~diws~g~~l~~~~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (237)
                      +.|+.++||||+||++||+++ |..||.+.+      +++.++.+...                                
T Consensus       680 ~kFTteSDVWs~GVvLWEIFsyG~QPy~glS------n~EVIe~i~~g--------------------------------  721 (774)
T KOG1026|consen  680 GKFTTESDVWSFGVVLWEIFSYGKQPYYGLS------NQEVIECIRAG--------------------------------  721 (774)
T ss_pred             CcccchhhhhhhhhhhhhhhccccCcccccc------hHHHHHHHHcC--------------------------------
Confidence            999999999999999999986 888998874      44444443221                                


Q ss_pred             CCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhc
Q 026540          157 FWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ  201 (237)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  201 (237)
                               .....+++++.++.+|+..|++.+|++||+++||-.
T Consensus       722 ---------~lL~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~  757 (774)
T KOG1026|consen  722 ---------QLLSCPENCPTEVYSLMLECWNENPKRRPSFKEIHS  757 (774)
T ss_pred             ---------CcccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHH
Confidence                     123468889999999999999999999999999743

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=99.93  E-value=5.6e-26  Score=183.34  Aligned_cols=160  Identities=19%  Similarity=0.297  Sum_probs=122.6

Q ss_pred             hHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC-----cccCcCCCcccchHHhhhc
Q 026540            4 VEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ-----FAEEIQTRQYRAPEVILRA   78 (237)
Q Consensus         4 ~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~-----~~~~~~~~~~~~PE~~~~~   78 (237)
                      +...+.+++.|++.||.|+|..++.||||||+||+++.++.++++|||++......     .....++..|++||.+.+.
T Consensus       117 ~~~~~~~~~~~l~~~l~~lH~~~i~H~dikp~nili~~~~~~~L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~  196 (288)
T cd05061         117 TLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDG  196 (288)
T ss_pred             CHHHHHHHHHHHHHHHHHHHhCCCcCCCCChheEEEcCCCcEEECcCCccccccccccccccCCCcccccccCHHHhccC
Confidence            34578889999999999999999999999999999999999999999988643221     1122345679999999888


Q ss_pred             CCCchhhhhhhhhHHHHHhc-CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccC
Q 026540           79 GYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKF  157 (237)
Q Consensus        79 ~~~~~~diws~g~~l~~~~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (237)
                      .++.++|+||+|++++++++ |..||.+..      ..+....+..  +                               
T Consensus       197 ~~~~~~DvwslG~~l~el~~~~~~p~~~~~------~~~~~~~~~~--~-------------------------------  237 (288)
T cd05061         197 VFTTSSDMWSFGVVLWEITSLAEQPYQGLS------NEQVLKFVMD--G-------------------------------  237 (288)
T ss_pred             CCChHhHHHHHHHHHHHHHhCCCCCCCCCC------HHHHHHHHHc--C-------------------------------
Confidence            89999999999999999998 677876432      1111111100  0                               


Q ss_pred             CchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhc------CCCcCcccC
Q 026540          158 WSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ------HPWLSLRNS  210 (237)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~------hp~f~~~~~  210 (237)
                              .....+..++..+.+++.+||+.||.+|||+.++++      ||||.+.++
T Consensus       238 --------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~~~~~~~~  288 (288)
T cd05061         238 --------GYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFPEVSF  288 (288)
T ss_pred             --------CCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhcCCCCCCCCC
Confidence                    000112234578999999999999999999999987      999998753

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=99.93  E-value=3.7e-26  Score=180.93  Aligned_cols=156  Identities=19%  Similarity=0.256  Sum_probs=122.6

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCC-CcEEEeecCcceecCcC--cccCcCCCcccchHHhhhcC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGID-MRCKVVDFGNACRANKQ--FAEEIQTRQYRAPEVILRAG   79 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~-~~~kl~dfg~~~~~~~~--~~~~~~~~~~~~PE~~~~~~   79 (237)
                      +++.++..++.+++.++.|+|..++.|+|+||+||+++.+ ..++++|||.+......  .....++..|++||.+.+..
T Consensus        98 ~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  177 (256)
T cd08220          98 LDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKSKAYTVVGTPCYISPELCEGKP  177 (256)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEccCCCceecCCCccccccccCCcccCchhccCCC
Confidence            6788899999999999999999999999999999999865 56899999988654422  22346678999999998888


Q ss_pred             CCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCc
Q 026540           80 YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWS  159 (237)
Q Consensus        80 ~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (237)
                      ++.++|+||+|++++++++|..||....      ..........                                    
T Consensus       178 ~~~~~Dv~slG~~l~~l~~~~~~~~~~~------~~~~~~~~~~------------------------------------  215 (256)
T cd08220         178 YNQKSDIWALGCVLYELASLKRAFEAAN------LPALVLKIMS------------------------------------  215 (256)
T ss_pred             CCcccchHHHHHHHHHHHhCCCCcccCc------hHHHHHHHHh------------------------------------
Confidence            8899999999999999999999886542      1111110000                                    


Q ss_pred             hhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCc
Q 026540          160 LDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL  205 (237)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f  205 (237)
                           ......+...+..+.+++.+||..+|.+|||+.|+++||||
T Consensus       216 -----~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~~p~~  256 (256)
T cd08220         216 -----GTFAPISDRYSPDLRQLILSMLNLDPSKRPQLSQIMAQPIC  256 (256)
T ss_pred             -----cCCCCCCCCcCHHHHHHHHHHccCChhhCCCHHHHhhCCCC
Confidence                 00011223356788999999999999999999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]

Probab=99.93  E-value=7.8e-27  Score=175.88  Aligned_cols=156  Identities=21%  Similarity=0.267  Sum_probs=118.2

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhc--CCccCCCCCccccCCCCcEEEeecCcceecCc------------CcccCcCCCc
Q 026540            3 IVEKKLKRRAKRAVANISIRRASM--GGIELPKPERCLDGIDMRCKVVDFGNACRANK------------QFAEEIQTRQ   68 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~--~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~------------~~~~~~~~~~   68 (237)
                      ++|.+++.++.++.+||.++|...  +.||||||.|||++.++.+++.|||++....-            .......|..
T Consensus       124 ~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~~~~~vl~D~GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~p  203 (302)
T KOG2345|consen  124 VSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSDSGLPVLMDLGSATQAPIQIEGSRQALRLQEWAEERCTIP  203 (302)
T ss_pred             cCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecCCCceEEEeccCccccceEeechHHHHHHHHHHHHhCCCc
Confidence            689999999999999999999999  99999999999999999999999999854321            1123355889


Q ss_pred             ccchHHhhhc---CCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcc
Q 026540           69 YRAPEVILRA---GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDR  145 (237)
Q Consensus        69 ~~~PE~~~~~---~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  145 (237)
                      |+|||.+...   ..+.++||||+||++|.+..|..||...-.+|-               .+.            ..-.
T Consensus       204 yRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~Gg---------------Sla------------LAv~  256 (302)
T KOG2345|consen  204 YRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQGG---------------SLA------------LAVQ  256 (302)
T ss_pred             ccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhcCC---------------eEE------------Eeee
Confidence            9999998754   367899999999999999999999963311100               000            0000


Q ss_pred             cCccchhccccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcC
Q 026540          146 HGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQH  202 (237)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h  202 (237)
                      ++.       -          ........+..+.++|..||+.||.+||++.+++.+
T Consensus       257 n~q-------~----------s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~  296 (302)
T KOG2345|consen  257 NAQ-------I----------SIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSK  296 (302)
T ss_pred             ccc-------c----------ccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHH
Confidence            000       0          000112257889999999999999999999999864

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=99.93  E-value=2.2e-26  Score=184.49  Aligned_cols=155  Identities=23%  Similarity=0.316  Sum_probs=125.0

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcCc----------------------
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQF----------------------   60 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~~----------------------   60 (237)
                      +++..+..++.|++.+|.++|..++.|+|++|+||+++.++.++++|||++.......                      
T Consensus        99 l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  178 (280)
T cd05581          99 LDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSPESNKGDATNIDSQIEKNRRR  178 (280)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEecCCccccccCCccccccCCCCCccccccccccccc
Confidence            6788899999999999999999999999999999999999999999999875433211                      


Q ss_pred             -ccCcCCCcccchHHhhhcCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCc
Q 026540           61 -AEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQS  139 (237)
Q Consensus        61 -~~~~~~~~~~~PE~~~~~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  139 (237)
                       ....++..|++||......++.++|+||+|++++++++|..||....      .......+                  
T Consensus       179 ~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~------~~~~~~~~------------------  234 (280)
T cd05581         179 FASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSN------EYLTFQKI------------------  234 (280)
T ss_pred             cccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCcc------HHHHHHHH------------------
Confidence             12355788999999988888999999999999999999999997542      11111111                  


Q ss_pred             hhhhcccCccchhccccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCH----HHHhcCCCc
Q 026540          140 KDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTA----QQCLQHPWL  205 (237)
Q Consensus       140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~----~ell~hp~f  205 (237)
                                              .......+...+..+.+|+.+||+.+|.+|||+    +++++||||
T Consensus       235 ------------------------~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~~~~  280 (280)
T cd05581         235 ------------------------LKLEYSFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAHPFF  280 (280)
T ss_pred             ------------------------HhcCCCCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhcCCCC
Confidence                                    111222334456788999999999999999999    999999998

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=99.93  E-value=2.9e-26  Score=181.99  Aligned_cols=159  Identities=23%  Similarity=0.276  Sum_probs=126.6

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC--cccCcCCCcccchHHhhhcC
Q 026540            2 TIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ--FAEEIQTRQYRAPEVILRAG   79 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~--~~~~~~~~~~~~PE~~~~~~   79 (237)
                      .+.+.++..++.+++.+|.|+|..++.|+||+|+||+++.++.++++|||++......  .....++..|++||.+....
T Consensus        96 ~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~  175 (258)
T cd05578          96 KFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDTLTTSTSGTPGYMAPEVLCRQG  175 (258)
T ss_pred             CcCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEEcCCCCEEEeecccccccCCCccccccCCChhhcCHHHHcccC
Confidence            3678899999999999999999999999999999999999999999999988654322  23445678899999998888


Q ss_pred             CCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCc
Q 026540           80 YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWS  159 (237)
Q Consensus        80 ~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (237)
                      ++.++|+||+|++++++++|..||......       ...........                                
T Consensus       176 ~~~~~Di~slG~~l~~l~~g~~p~~~~~~~-------~~~~~~~~~~~--------------------------------  216 (258)
T cd05578         176 YSVAVDWWSLGVTAYECLRGKRPYRGHSRT-------IRDQIRAKQET--------------------------------  216 (258)
T ss_pred             CCCcccchhhHHHHHHHHhCCCCCCCCCcc-------HHHHHHHHhcc--------------------------------
Confidence            899999999999999999999999765311       01111110000                                


Q ss_pred             hhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCH--HHHhcCCCc
Q 026540          160 LDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTA--QQCLQHPWL  205 (237)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~--~ell~hp~f  205 (237)
                            .....+...+..+.++|.+||+.||.+|+++  +|+++||||
T Consensus       217 ------~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~~~~~~  258 (258)
T cd05578         217 ------ADVLYPATWSTEAIDAINKLLERDPQKRLGDNLKDLKNHPYF  258 (258)
T ss_pred             ------ccccCcccCcHHHHHHHHHHccCChhHcCCccHHHHhcCCCC
Confidence                  1112233446788999999999999999999  999999998

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=99.93  E-value=4.2e-26  Score=180.01  Aligned_cols=155  Identities=28%  Similarity=0.358  Sum_probs=125.8

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC---cccCcCCCcccchHHhhhcC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ---FAEEIQTRQYRAPEVILRAG   79 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~~~~PE~~~~~~   79 (237)
                      +++..+..++.|++.++.|+|..++.|+||+|+||+++.++.++++|||.+......   .....++..|++||...+..
T Consensus        90 l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~  169 (250)
T cd05123          90 FSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEGSRTNTFCGTPEYLAPEVLLGKG  169 (250)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEEcCCCcEEEeecCcceecccCCCcccCCcCCccccChHHhCCCC
Confidence            578889999999999999999999999999999999999999999999988654332   33446678899999998888


Q ss_pred             CCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCc
Q 026540           80 YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWS  159 (237)
Q Consensus        80 ~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (237)
                      .+.++|+||+|++++++++|..||....      .......+                                      
T Consensus       170 ~~~~~D~~slG~~~~~l~~g~~p~~~~~------~~~~~~~~--------------------------------------  205 (250)
T cd05123         170 YGKAVDWWSLGVLLYEMLTGKPPFYAED------RKEIYEKI--------------------------------------  205 (250)
T ss_pred             CCchhhHHHHHHHHHHHHHCCCCCCCCC------HHHHHHHH--------------------------------------
Confidence            8899999999999999999999996442      11111111                                      


Q ss_pred             hhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCH---HHHhcCCCc
Q 026540          160 LDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTA---QQCLQHPWL  205 (237)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~---~ell~hp~f  205 (237)
                          .......+...+..+.+++.+||..||.+|||+   +++++||||
T Consensus       206 ----~~~~~~~~~~~~~~l~~~i~~~l~~~p~~R~~~~~~~~l~~~~~f  250 (250)
T cd05123         206 ----LKDPLRFPEFLSPEARDLISGLLQKDPTKRLGSGGAEEIKAHPFF  250 (250)
T ss_pred             ----hcCCCCCCCCCCHHHHHHHHHHhcCCHhhCCCcccHHHHHhCCCC
Confidence                001122334446788999999999999999999   999999998

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=99.93  E-value=3.2e-26  Score=183.11  Aligned_cols=161  Identities=24%  Similarity=0.342  Sum_probs=121.9

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC-----cccCcCCCcccchHHhhh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ-----FAEEIQTRQYRAPEVILR   77 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~-----~~~~~~~~~~~~PE~~~~   77 (237)
                      +++..+..++.|++.+|.++|..++.|+||+|+||+++.++.++++|||++......     .....++..|++||.+..
T Consensus       105 l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~  184 (272)
T cd06629         105 FEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLVDADGICKISDFGISKKSDDIYDNDQNMSMQGSVFWMAPEVIHS  184 (272)
T ss_pred             CCHHHHHHHHHHHHHHHHHHhhCCeeecCCChhhEEEcCCCeEEEeeccccccccccccccccccccCCccccCHHHhcc
Confidence            567888999999999999999999999999999999999999999999988643321     122356788999999886


Q ss_pred             cC--CCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccc
Q 026540           78 AG--YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRL  155 (237)
Q Consensus        78 ~~--~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (237)
                      ..  ++.++|+||+|++++++++|..||....         ............         .                 
T Consensus       185 ~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~---------~~~~~~~~~~~~---------~-----------------  229 (272)
T cd06629         185 YSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEE---------AIAAMFKLGNKR---------S-----------------  229 (272)
T ss_pred             ccCCCCccchhHHHHHHHHHHHhCCCCCcCcc---------hHHHHHHhhccc---------c-----------------
Confidence            54  7889999999999999999999985432         111111110000         0                 


Q ss_pred             cCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCc
Q 026540          156 KFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL  205 (237)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f  205 (237)
                       ....      .......++..+.+++.+||..+|.+|||++++++||||
T Consensus       230 -~~~~------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~  272 (272)
T cd06629         230 -APPI------PPDVSMNLSPVALDFLNACFTINPDNRPTARELLQHPFI  272 (272)
T ss_pred             -CCcC------CccccccCCHHHHHHHHHHhcCChhhCCCHHHHhhCCCC
Confidence             0000      000112346789999999999999999999999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=99.93  E-value=6.2e-26  Score=178.68  Aligned_cols=158  Identities=29%  Similarity=0.376  Sum_probs=123.7

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC--cccCcCCCcccchHHhhhcC
Q 026540            2 TIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ--FAEEIQTRQYRAPEVILRAG   79 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~--~~~~~~~~~~~~PE~~~~~~   79 (237)
                      .+++.++..++.+++.+|.++|..++.|+|++|+||+++.++.++|+|||.+......  .....++..|++||.+.+..
T Consensus        94 ~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~  173 (253)
T cd05122          94 TLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKARNTMVGTPYWMAPEVINGKP  173 (253)
T ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCEecCCCCHHHEEEccCCeEEEeeccccccccccccccceecCCcccCHHHHcCCC
Confidence            4678889999999999999999999999999999999999999999999988655433  23456788999999998878


Q ss_pred             CCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCc
Q 026540           80 YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWS  159 (237)
Q Consensus        80 ~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (237)
                      ++.++|+||+|++++++++|..||....      .......... . ..+                              
T Consensus       174 ~~~~~Dv~slG~il~~l~~g~~p~~~~~------~~~~~~~~~~-~-~~~------------------------------  215 (253)
T cd05122         174 YDYKADIWSLGITAIELAEGKPPYSELP------PMKALFKIAT-N-GPP------------------------------  215 (253)
T ss_pred             CCccccHHHHHHHHHHHHhCCCCCCCCc------hHHHHHHHHh-c-CCC------------------------------
Confidence            8899999999999999999999986542      1111111100 0 000                              


Q ss_pred             hhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCC
Q 026540          160 LDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPW  204 (237)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~  204 (237)
                             ........+..+.+++.+||+.||.+|||+.++++|||
T Consensus       216 -------~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~~~~  253 (253)
T cd05122         216 -------GLRNPEKWSDEFKDFLKKCLQKNPEKRPTAEQLLKHPF  253 (253)
T ss_pred             -------CcCcccccCHHHHHHHHHHccCChhhCCCHHHHhcCCC
Confidence                   00001112567899999999999999999999999998

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=99.93  E-value=7.2e-26  Score=179.41  Aligned_cols=156  Identities=22%  Similarity=0.281  Sum_probs=124.3

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC---cccCcCCCcccchHHhhhcC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ---FAEEIQTRQYRAPEVILRAG   79 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~~~~PE~~~~~~   79 (237)
                      +++.++..++.|++.++.|+|..++.|+||+|+||+++.++.+|++|||++......   .....++..|.+||.+.+..
T Consensus        98 ~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~  177 (256)
T cd08221          98 FEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYSMAETVVGTPYYMSPELCQGVK  177 (256)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCccccCCChHhEEEeCCCCEEECcCcceEEcccccccccccCCCccccCHhhcCCCC
Confidence            578889999999999999999999999999999999999999999999988654332   23456788999999998888


Q ss_pred             CCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCc
Q 026540           80 YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWS  159 (237)
Q Consensus        80 ~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (237)
                      ++.++|+||+|++++++++|..||....      .......+..  +..                               
T Consensus       178 ~~~~~Dv~slG~i~~~l~~g~~~~~~~~------~~~~~~~~~~--~~~-------------------------------  218 (256)
T cd08221         178 YNFKSDIWALGCVLYELLTLKRTFDATN------PLNLVVKIVQ--GNY-------------------------------  218 (256)
T ss_pred             CCCcchhHHHHHHHHHHHHCCCCCCCCC------HHHHHHHHHc--CCC-------------------------------
Confidence            8889999999999999999999886532      1111111100  000                               


Q ss_pred             hhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCc
Q 026540          160 LDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL  205 (237)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f  205 (237)
                              .......+..+.+++.+||..+|.+||+++++++|+|+
T Consensus       219 --------~~~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~~~l  256 (256)
T cd08221         219 --------TPVVSVYSSELISLVHSLLQQDPEKRPTADEVLDQPLL  256 (256)
T ss_pred             --------CCCccccCHHHHHHHHHHcccCcccCCCHHHHhhCcCC
Confidence                    00112345778899999999999999999999999986

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=99.93  E-value=6.5e-26  Score=181.22  Aligned_cols=153  Identities=15%  Similarity=0.205  Sum_probs=118.1

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcCc-----ccCcCCCcccchHHhhh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQF-----AEEIQTRQYRAPEVILR   77 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~~-----~~~~~~~~~~~PE~~~~   77 (237)
                      +++..+..++.|++.||.|+|..+++||||||+||+++.++.++++|||++.......     ....++..|++||...+
T Consensus       109 ~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~  188 (272)
T cd05075         109 LPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCMLNENMNVCVADFGLSKKIYNGDYYRQGRIAKMPVKWIAIESLAD  188 (272)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCeeccccchhheEEcCCCCEEECCCCcccccCcccceecCCcccCCcccCCHHHccC
Confidence            5788899999999999999999999999999999999999999999999986543211     12234567999999988


Q ss_pred             cCCCchhhhhhhhhHHHHHhc-CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcccc
Q 026540           78 AGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLK  156 (237)
Q Consensus        78 ~~~~~~~diws~g~~l~~~~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (237)
                      ..++.++|+||+|++++++++ |..||....      .......+..  +                              
T Consensus       189 ~~~~~~~Di~slG~il~el~~~g~~p~~~~~------~~~~~~~~~~--~------------------------------  230 (272)
T cd05075         189 RVYTTKSDVWSFGVTMWEIATRGQTPYPGVE------NSEIYDYLRQ--G------------------------------  230 (272)
T ss_pred             CCcChHHHHHHHHHHHHHHHcCCCCCCCCCC------HHHHHHHHHc--C------------------------------
Confidence            889999999999999999998 788886532      1111111100  0                              


Q ss_pred             CCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcC
Q 026540          157 FWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQH  202 (237)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h  202 (237)
                               .....+..++..+.+++.+||+.||.+|||+.++++.
T Consensus       231 ---------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~  267 (272)
T cd05075         231 ---------NRLKQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCE  267 (272)
T ss_pred             ---------CCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence                     0001122345678999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.93  E-value=1.9e-26  Score=185.29  Aligned_cols=166  Identities=20%  Similarity=0.241  Sum_probs=139.4

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceec---CcCcccCcCCCcccchHHhhhcC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRA---NKQFAEEIQTRQYRAPEVILRAG   79 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~---~~~~~~~~~~~~~~~PE~~~~~~   79 (237)
                      +.|..|+-|++.|+-||-++|+.+|++||||.+||+++.+|++||+|||++...   +......+||+-|.|||++...+
T Consensus       447 FKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni~~~~TTkTFCGTPdYiAPEIi~YqP  526 (683)
T KOG0696|consen  447 FKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIFDGVTTKTFCGTPDYIAPEIIAYQP  526 (683)
T ss_pred             cCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEeccCCceEeeecccccccccCCcceeeecCCCcccccceEEecc
Confidence            567889999999999999999999999999999999999999999999998543   23345679999999999999999


Q ss_pred             CCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCc
Q 026540           80 YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWS  159 (237)
Q Consensus        80 ~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (237)
                      |+.++|.||+|+++|||+.|+.||.+..      +.+..+.+.+-                                   
T Consensus       527 YgksvDWWa~GVLLyEmlaGQpPFdGeD------E~elF~aI~eh-----------------------------------  565 (683)
T KOG0696|consen  527 YGKSVDWWAFGVLLYEMLAGQPPFDGED------EDELFQAIMEH-----------------------------------  565 (683)
T ss_pred             cccchhHHHHHHHHHHHHcCCCCCCCCC------HHHHHHHHHHc-----------------------------------
Confidence            9999999999999999999999998763      33333333221                                   


Q ss_pred             hhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCC-----HHHHhcCCCcCcccCCccccc
Q 026540          160 LDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPT-----AQQCLQHPWLSLRNSTRDETK  216 (237)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t-----~~ell~hp~f~~~~~~~~~~~  216 (237)
                             ....|..++.++.++....|...|.+|+.     -.++-.||||..+++...+..
T Consensus       566 -------nvsyPKslSkEAv~ickg~ltK~P~kRLGcg~~ge~di~~H~FFR~iDWek~E~~  620 (683)
T KOG0696|consen  566 -------NVSYPKSLSKEAVAICKGLLTKHPGKRLGCGPEGERDIREHPFFRRIDWEKLERR  620 (683)
T ss_pred             -------cCcCcccccHHHHHHHHHHhhcCCccccCCCCccccchhhCcchhhccHHHHhhc
Confidence                   23346677889999999999999999975     347889999999888766544

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=99.93  E-value=4.2e-26  Score=181.33  Aligned_cols=164  Identities=26%  Similarity=0.368  Sum_probs=127.9

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhh-hcCCccCCCCCccccCCCCcEEEeecCcceecCcCc---ccCcCCCcccchHHhhh
Q 026540            2 TIVEKKLKRRAKRAVANISIRRA-SMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQF---AEEIQTRQYRAPEVILR   77 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~-~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~~---~~~~~~~~~~~PE~~~~   77 (237)
                      .+++..+.+++.|+++++.|+|. .++.|+|++|+||+++.++.++|+|||.+.......   ....++..|++||.+..
T Consensus        95 ~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~  174 (264)
T cd06623          95 KIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLINSKGEVKIADFGISKVLENTLDQCNTFVGTVTYMSPERIQG  174 (264)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEECCCCCEEEccCccceecccCCCcccceeecccccCHhhhCC
Confidence            36788999999999999999999 999999999999999999999999999886543221   13456788999999988


Q ss_pred             cCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccC
Q 026540           78 AGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKF  157 (237)
Q Consensus        78 ~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (237)
                      ..++.++|+||+|++++++++|..||.....      ....+....+....                             
T Consensus       175 ~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~------~~~~~~~~~~~~~~-----------------------------  219 (264)
T cd06623         175 ESYSYAADIWSLGLTLLECALGKFPFLPPGQ------PSFFELMQAICDGP-----------------------------  219 (264)
T ss_pred             CCCCchhhHHHHHHHHHHHHhCCCCCccccc------cCHHHHHHHHhcCC-----------------------------
Confidence            8889999999999999999999999865531      01111111111000                             


Q ss_pred             CchhHHhhhhcCCCHH-hHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCccc
Q 026540          158 WSLDRLLVDKYRFSET-DAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRN  209 (237)
Q Consensus       158 ~~~~~~~~~~~~~~~~-~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~  209 (237)
                               ....+.. .+..+.+++..||..+|.+|||+.++++||||...+
T Consensus       220 ---------~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~~~~~~~~  263 (264)
T cd06623         220 ---------PPSLPAEEFSPEFRDFISACLQKDPKKRPSAAELLQHPFIKKAD  263 (264)
T ss_pred             ---------CCCCCcccCCHHHHHHHHHHccCChhhCCCHHHHHhCHHHHhcc
Confidence                     0011222 467899999999999999999999999999997643

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=99.93  E-value=6.2e-26  Score=184.74  Aligned_cols=160  Identities=22%  Similarity=0.241  Sum_probs=124.4

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcCcccCcCCCcccchHHhhh---cC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILR---AG   79 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~PE~~~~---~~   79 (237)
                      +++..+..++.|++.+|.|+|..++.|+||+|+||+++.++.++|+|||++...... ....++..|++||++.+   ..
T Consensus       112 l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~  190 (307)
T cd06607         112 LQEVEIAAICHGALQGLAYLHSHERIHRDIKAGNILLTEPGTVKLADFGSASLVSPA-NSFVGTPYWMAPEVILAMDEGQ  190 (307)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEECCCCCEEEeecCcceecCCC-CCccCCccccCceeeeccCCCC
Confidence            577889999999999999999999999999999999999999999999988654322 34467788999998853   45


Q ss_pred             CCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCc
Q 026540           80 YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWS  159 (237)
Q Consensus        80 ~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (237)
                      ++.++|+||+|+++|++++|..||....      ......   ......+                              
T Consensus       191 ~~~~sDv~s~G~il~el~tg~~p~~~~~------~~~~~~---~~~~~~~------------------------------  231 (307)
T cd06607         191 YDGKVDVWSLGITCIELAERKPPLFNMN------AMSALY---HIAQNDS------------------------------  231 (307)
T ss_pred             CCcccchHHHHHHHHHHHcCCCCCCCcc------HHHHHH---HHhcCCC------------------------------
Confidence            7889999999999999999999986542      111111   0000000                              


Q ss_pred             hhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCccc
Q 026540          160 LDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRN  209 (237)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~  209 (237)
                             ........+..+.+++.+||..+|.+||++.+++.||||....
T Consensus       232 -------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~  274 (307)
T cd06607         232 -------PTLSSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKHRFVLRER  274 (307)
T ss_pred             -------CCCCchhhCHHHHHHHHHHhcCChhhCcCHHHHhcChhhcccC
Confidence                   0000112456789999999999999999999999999998654

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]

Probab=99.93  E-value=3.7e-26  Score=190.76  Aligned_cols=157  Identities=22%  Similarity=0.280  Sum_probs=121.8

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecC-----cCcccCcCCCcccchHHhh
Q 026540            2 TIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRAN-----KQFAEEIQTRQYRAPEVIL   76 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~-----~~~~~~~~~~~~~~PE~~~   76 (237)
                      .|...+..+|++|++.|+.|||.++|+|||||..||++.++++|||+|||++..-.     .......|...|+|||+++
T Consensus       484 kfdm~~~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl~~~~kVkIgDFGLatvk~~w~g~~q~~qp~gsilwmAPEvIR  563 (678)
T KOG0193|consen  484 KFDMNTTIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFLHEDLKVKIGDFGLATVKTRWSGEQQLEQPHGSLLWMAPEVIR  563 (678)
T ss_pred             hhhHHHHHHHHHHHHHhhhhhhhhhhhhhhccccceEEccCCcEEEecccceeeeeeeccccccCCCccchhhhcHHHHh
Confidence            36778999999999999999999999999999999999999999999999984321     2334556678999999998


Q ss_pred             hc---CCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhc
Q 026540           77 RA---GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIR  153 (237)
Q Consensus        77 ~~---~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (237)
                      ..   +|+..+||||||+++||+++|..||.....       +++                       .|...      .
T Consensus       564 mqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~-------dqI-----------------------ifmVG------r  607 (678)
T KOG0193|consen  564 MQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNR-------DQI-----------------------IFMVG------R  607 (678)
T ss_pred             hcccCCCCcccchhhhhHHHHHHHhCcCCcCCCCh-------hhe-----------------------EEEec------c
Confidence            43   689999999999999999999999973321       110                       00000      0


Q ss_pred             cccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhc
Q 026540          154 RLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ  201 (237)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  201 (237)
                      .       ....+.......+++++.+|+..|+.+++++||.+.+||.
T Consensus       608 G-------~l~pd~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~  648 (678)
T KOG0193|consen  608 G-------YLMPDLSKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLS  648 (678)
T ss_pred             c-------ccCccchhhhccCHHHHHHHHHHHHhcCcccCccHHHHHH
Confidence            0       0001111223456889999999999999999999999986

>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.93  E-value=8e-26  Score=176.28  Aligned_cols=171  Identities=20%  Similarity=0.290  Sum_probs=129.4

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCC---CcEEEeecCcceec--C--------cCcccCcCCCcc
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGID---MRCKVVDFGNACRA--N--------KQFAEEIQTRQY   69 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~---~~~kl~dfg~~~~~--~--------~~~~~~~~~~~~   69 (237)
                      ++|-+|..+.+.|+.||.++|..+|.|||+||+|||-...   ..+||+||.+..-.  +        ......+|+..|
T Consensus       173 F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~~~spastP~L~tPvGSAEf  252 (463)
T KOG0607|consen  173 FNEREASRVVKDIASALDFLHTKGIAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLNNDCSPASTPELLTPVGSAEF  252 (463)
T ss_pred             ccHHHHHHHHHHHHHHHHHHhhcCcccccCCccceeecCCCCcCceeeeccccccccccCCCCCCCCCccccCcccchhh
Confidence            6899999999999999999999999999999999998653   35799999876321  1        123356888899


Q ss_pred             cchHHhhhc-----CCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCC-----ChHHHHHHHHHHHCCCCHHHHhcCCCc
Q 026540           70 RAPEVILRA-----GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFC-----EDEDHLALMMELIGKMPRKIAIGGAQS  139 (237)
Q Consensus        70 ~~PE~~~~~-----~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~  139 (237)
                      ||||+..-.     -|+.++|.||+|+++|-|++|++||.+.=+...+     .=....+.+                  
T Consensus       253 MAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~~L------------------  314 (463)
T KOG0607|consen  253 MAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKL------------------  314 (463)
T ss_pred             cchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccHHHHHHH------------------
Confidence            999997622     3789999999999999999999999876432111     001111111                  


Q ss_pred             hhhhcccCccchhccccCCchhHHhhhhcCCCHH----hHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccCC
Q 026540          140 KDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSET----DAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNST  211 (237)
Q Consensus       140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~~  211 (237)
                                          .+.+....+.+|+.    ++.+..++++.+|..|+..|.++.++++|||+......
T Consensus       315 --------------------FesIQEGkYeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vlnhPw~~~~~~e  370 (463)
T KOG0607|consen  315 --------------------FESIQEGKYEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLNHPWVQRCAPE  370 (463)
T ss_pred             --------------------HHHHhccCCcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccCCccccccchh
Confidence                                22223334444433    47788999999999999999999999999999977543

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=99.93  E-value=9.5e-26  Score=178.77  Aligned_cols=153  Identities=21%  Similarity=0.273  Sum_probs=121.6

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC-----cccCcCCCcccchHHhhh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ-----FAEEIQTRQYRAPEVILR   77 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~-----~~~~~~~~~~~~PE~~~~   77 (237)
                      +++.++..++.|++.||+++|..+++|+||||+||+++.++.++++|||.+......     .....++..|++||.+..
T Consensus       102 ~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  181 (262)
T cd00192         102 LSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYDDDYYRKKTGGKLPIRWMAPESLKD  181 (262)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHcCCcccCccCcceEEECCCCcEEEcccccccccccccccccccCCCcCccccCHHHhcc
Confidence            678999999999999999999999999999999999999999999999998654432     223455778999999988


Q ss_pred             cCCCchhhhhhhhhHHHHHhc-CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcccc
Q 026540           78 AGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLK  156 (237)
Q Consensus        78 ~~~~~~~diws~g~~l~~~~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (237)
                      ..++.++|+||+|++++++++ |..||....      .......+..                                 
T Consensus       182 ~~~~~~~Di~slG~il~~l~~~g~~p~~~~~------~~~~~~~~~~---------------------------------  222 (262)
T cd00192         182 GIFTSKSDVWSFGVLLWEIFTLGATPYPGLS------NEEVLEYLRK---------------------------------  222 (262)
T ss_pred             CCcchhhccHHHHHHHHHHHhcCCCCCCCCC------HHHHHHHHHc---------------------------------
Confidence            888999999999999999998 588886542      1111111110                                 


Q ss_pred             CCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcC
Q 026540          157 FWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQH  202 (237)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h  202 (237)
                              ......+...+..+.+++.+||+.+|.+|||+.|++++
T Consensus       223 --------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~  260 (262)
T cd00192         223 --------GYRLPKPEYCPDELYELMLSCWQLDPEDRPTFSELVER  260 (262)
T ss_pred             --------CCCCCCCccCChHHHHHHHHHccCCcccCcCHHHHHHh
Confidence                    00111233446789999999999999999999999865

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=99.93  E-value=6.4e-26  Score=183.01  Aligned_cols=152  Identities=16%  Similarity=0.257  Sum_probs=118.2

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC-----cccCcCCCcccchHHhhh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ-----FAEEIQTRQYRAPEVILR   77 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~-----~~~~~~~~~~~~PE~~~~   77 (237)
                      +++.++..++.|++.+|.|+|..++.||||||+||+++.++.++|+|||++......     .....++..|+|||.+.+
T Consensus       117 l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  196 (288)
T cd05093         117 LTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMY  196 (288)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCCcEEeccCCccccccCCceeecCCCCCccccccCHHHhcc
Confidence            688899999999999999999999999999999999999999999999998643221     122334668999999988


Q ss_pred             cCCCchhhhhhhhhHHHHHhc-CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcccc
Q 026540           78 AGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLK  156 (237)
Q Consensus        78 ~~~~~~~diws~g~~l~~~~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (237)
                      ..++.++|+||+|++++++++ |..||....      .......+..  +.                             
T Consensus       197 ~~~~~~sDiwslG~il~~l~t~g~~p~~~~~------~~~~~~~i~~--~~-----------------------------  239 (288)
T cd05093         197 RKFTTESDVWSLGVVLWEIFTYGKQPWYQLS------NNEVIECITQ--GR-----------------------------  239 (288)
T ss_pred             CCCCchhhHHHHHHHHHHHHhCCCCCCCCCC------HHHHHHHHHc--CC-----------------------------
Confidence            889999999999999999998 888886542      1111111100  00                             


Q ss_pred             CCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhc
Q 026540          157 FWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ  201 (237)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  201 (237)
                                ....+...+..+.+|+.+||+.||.+|||+.++++
T Consensus       240 ----------~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~  274 (288)
T cd05093         240 ----------VLQRPRTCPKEVYDLMLGCWQREPHMRLNIKEIHS  274 (288)
T ss_pred             ----------cCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence                      00112234567899999999999999999999864

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=99.93  E-value=7e-26  Score=189.33  Aligned_cols=154  Identities=19%  Similarity=0.236  Sum_probs=117.2

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcCcc-----cCcCCCcccchHHhhh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQFA-----EEIQTRQYRAPEVILR   77 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~~~-----~~~~~~~~~~PE~~~~   77 (237)
                      +++..+.+++.|++.||.|+|..+++||||||+||+++.++.++|+|||++........     ...++..|+|||.+.+
T Consensus       211 l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  290 (375)
T cd05104         211 LDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIRNDSNYVVKGNARLPVKWMAPESIFN  290 (375)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEEECCCcEEEecCccceeccCcccccccCCCCCCcceeChhHhcC
Confidence            67888999999999999999999999999999999999999999999999865432211     1223457999999998


Q ss_pred             cCCCchhhhhhhhhHHHHHhc-CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcccc
Q 026540           78 AGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLK  156 (237)
Q Consensus        78 ~~~~~~~diws~g~~l~~~~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (237)
                      ..++.++|+||+|++++++++ |..||....      ...........  .                     .       
T Consensus       291 ~~~~~~sDi~slG~~l~ellt~g~~p~~~~~------~~~~~~~~~~~--~---------------------~-------  334 (375)
T cd05104         291 CVYTFESDVWSYGILLWEIFSLGSSPYPGMP------VDSKFYKMIKE--G---------------------Y-------  334 (375)
T ss_pred             CCCCCCCCHHHHHHHHHHHHhcCCCCCCCCC------chHHHHHHHHh--C---------------------c-------
Confidence            889999999999999999997 778886542      11111100000  0                     0       


Q ss_pred             CCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcC
Q 026540          157 FWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQH  202 (237)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h  202 (237)
                                ....+...+.++.+|+.+||+.||++|||+.|+++.
T Consensus       335 ----------~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~  370 (375)
T cd05104         335 ----------RMLSPECAPSEMYDIMKSCWDADPLKRPTFKQIVQL  370 (375)
T ss_pred             ----------cCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHH
Confidence                      000112235678999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=99.93  E-value=3.5e-26  Score=185.07  Aligned_cols=162  Identities=25%  Similarity=0.386  Sum_probs=125.4

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCc---CcccCcCCCcccchHHhhhcC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK---QFAEEIQTRQYRAPEVILRAG   79 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~---~~~~~~~~~~~~~PE~~~~~~   79 (237)
                      +++.++..++.+++.+|.|+|..++.|+|+||+||+++.++.++|+|||++.....   ......++..|++||.+....
T Consensus       112 l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~  191 (293)
T cd06647         112 MDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKA  191 (293)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHHEEEcCCCCEEEccCcceecccccccccccccCChhhcCchhhccCC
Confidence            56778899999999999999999999999999999999999999999998754332   122335678899999998888


Q ss_pred             CCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCc
Q 026540           80 YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWS  159 (237)
Q Consensus        80 ~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (237)
                      ++.++|+||+|++++++++|..||......      .....+   . .                  .+            
T Consensus       192 ~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~------~~~~~~---~-~------------------~~------------  231 (293)
T cd06647         192 YGPKVDIWSLGIMAIEMVEGEPPYLNENPL------RALYLI---A-T------------------NG------------  231 (293)
T ss_pred             CCchhhHHHHHHHHHHHHhCCCCCCCCChh------hheeeh---h-c------------------CC------------
Confidence            899999999999999999999999654210      000000   0 0                  00            


Q ss_pred             hhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCccc
Q 026540          160 LDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRN  209 (237)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~  209 (237)
                           ......+...+..+.+++.+||..+|.+||++.+++.|+||....
T Consensus       232 -----~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h~~~~~~~  276 (293)
T cd06647         232 -----TPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHPFLKIAK  276 (293)
T ss_pred             -----CCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCHHHhcCc
Confidence                 000111223456788999999999999999999999999998654

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=99.93  E-value=7e-26  Score=183.03  Aligned_cols=152  Identities=15%  Similarity=0.251  Sum_probs=118.5

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC-----cccCcCCCcccchHHhhh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ-----FAEEIQTRQYRAPEVILR   77 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~-----~~~~~~~~~~~~PE~~~~   77 (237)
                      +++.++..++.|++.++.|+|..+++|+||||+||+++.++.++|+|||++......     .....++..|++||.+.+
T Consensus       120 ~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil~~~~~~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  199 (291)
T cd05094         120 LGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMY  199 (291)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCCcEEECCCCcccccCCCceeecCCCCCcceeecChHHhcc
Confidence            567889999999999999999999999999999999999999999999998644321     123345678999999988


Q ss_pred             cCCCchhhhhhhhhHHHHHhc-CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcccc
Q 026540           78 AGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLK  156 (237)
Q Consensus        78 ~~~~~~~diws~g~~l~~~~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (237)
                      ..++.++|+||+|++++++++ |..||....      .......+..  +.                             
T Consensus       200 ~~~~~~~Di~slG~il~el~t~g~~p~~~~~------~~~~~~~~~~--~~-----------------------------  242 (291)
T cd05094         200 RKFTTESDVWSFGVILWEIFTYGKQPWFQLS------NTEVIECITQ--GR-----------------------------  242 (291)
T ss_pred             CCCCchhhHHHHHHHHHHHHhCCCCCCCCCC------HHHHHHHHhC--CC-----------------------------
Confidence            889999999999999999998 888886542      1111111100  00                             


Q ss_pred             CCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhc
Q 026540          157 FWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ  201 (237)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  201 (237)
                                ....+..++..+.+++.+||+.+|.+|||+.++++
T Consensus       243 ----------~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~  277 (291)
T cd05094         243 ----------VLERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYK  277 (291)
T ss_pred             ----------CCCCCccCCHHHHHHHHHHcccChhhCcCHHHHHH
Confidence                      00012234567889999999999999999999875

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=99.93  E-value=9e-26  Score=181.13  Aligned_cols=152  Identities=18%  Similarity=0.266  Sum_probs=119.1

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC-----cccCcCCCcccchHHhhh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ-----FAEEIQTRQYRAPEVILR   77 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~-----~~~~~~~~~~~~PE~~~~   77 (237)
                      +++.++..++.|++.++.++|..+++|+||||+||+++.++.++|+|||++......     .....++..|+|||.+.+
T Consensus       119 l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  198 (280)
T cd05049         119 LTLSQLLQIAVQIASGMVYLASQHFVHRDLATRNCLVGYDLVVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMY  198 (280)
T ss_pred             ccHHHHHHHHHHHHHHHHHHhhCCeeccccccceEEEcCCCeEEECCcccceecccCcceecCCCCcccceecChhhhcc
Confidence            567889999999999999999999999999999999999999999999988643221     122344678999999998


Q ss_pred             cCCCchhhhhhhhhHHHHHhc-CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcccc
Q 026540           78 AGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLK  156 (237)
Q Consensus        78 ~~~~~~~diws~g~~l~~~~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (237)
                      ..++.++|+||+|++++++++ |..||....      .......+..  +.                             
T Consensus       199 ~~~~~~~Di~slG~il~e~~~~g~~p~~~~~------~~~~~~~~~~--~~-----------------------------  241 (280)
T cd05049         199 RKFTTESDVWSFGVVLWEIFTYGKQPWYGLS------NEEVIECITQ--GR-----------------------------  241 (280)
T ss_pred             CCcchhhhHHHHHHHHHHHHhcCCCCCCCCC------HHHHHHHHHc--CC-----------------------------
Confidence            889999999999999999998 999986542      2221111110  00                             


Q ss_pred             CCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhc
Q 026540          157 FWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ  201 (237)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  201 (237)
                                ....+...+..+.+++.+||+.||.+||++.|+++
T Consensus       242 ----------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~  276 (280)
T cd05049         242 ----------LLQRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHE  276 (280)
T ss_pred             ----------cCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence                      00112234677899999999999999999999975

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=99.93  E-value=1e-25  Score=179.23  Aligned_cols=157  Identities=25%  Similarity=0.330  Sum_probs=121.5

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC-------cccCcCCCcccchHHh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ-------FAEEIQTRQYRAPEVI   75 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~-------~~~~~~~~~~~~PE~~   75 (237)
                      +++..+..++.+++.++.|+|..++.|+||+|+||+++.++.++|+|||++......       .....++..|++||.+
T Consensus        96 ~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~  175 (264)
T cd06626          96 LDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTMGEEVQSLAGTPAYMAPEVI  175 (264)
T ss_pred             CChHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEcccccccccCCCCCcccccccCCcCCcCccChhhc
Confidence            567888999999999999999999999999999999999999999999988654321       1123567889999999


Q ss_pred             hhcC---CCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchh
Q 026540           76 LRAG---YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRI  152 (237)
Q Consensus        76 ~~~~---~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (237)
                      .+..   ++.++|+||+|++++++++|+.||....      ......  .......                        
T Consensus       176 ~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~------~~~~~~--~~~~~~~------------------------  223 (264)
T cd06626         176 TGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELD------NEFQIM--FHVGAGH------------------------  223 (264)
T ss_pred             cCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCc------chHHHH--HHHhcCC------------------------
Confidence            8765   7889999999999999999999996432      111111  0000000                        


Q ss_pred             ccccCCchhHHhhhhcCCCH--HhHHHHHHHHHhccccCCCCCCCHHHHhcCCCc
Q 026540          153 RRLKFWSLDRLLVDKYRFSE--TDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL  205 (237)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f  205 (237)
                                    ....+.  ..+..+.+|+.+||+.+|.+|||+++++.|||+
T Consensus       224 --------------~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~~~~  264 (264)
T cd06626         224 --------------KPPIPDSLQLSPEGKDFLDRCLESDPKKRPTASELLQHPFV  264 (264)
T ss_pred             --------------CCCCCcccccCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence                          000111  225677899999999999999999999999996

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=99.93  E-value=6.1e-26  Score=179.78  Aligned_cols=156  Identities=19%  Similarity=0.267  Sum_probs=121.8

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCC-cEEEeecCcceecCcC---cccCcCCCcccchHHhhhc
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDM-RCKVVDFGNACRANKQ---FAEEIQTRQYRAPEVILRA   78 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~-~~kl~dfg~~~~~~~~---~~~~~~~~~~~~PE~~~~~   78 (237)
                      +++..+..++.++++++.|+|..++.|+|+||+||+++.++ .++++|||.+......   .....++..|++||...+.
T Consensus        98 ~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~  177 (257)
T cd08225          98 FSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSMELAYTCVGTPYYLSPEICQNR  177 (257)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEcCCCCeEEecccccchhccCCcccccccCCCccccCHHHHcCC
Confidence            57888999999999999999999999999999999998875 5699999988654322   1223567889999999888


Q ss_pred             CCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCC
Q 026540           79 GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFW  158 (237)
Q Consensus        79 ~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (237)
                      .++.++|+||+|++++++++|..||....      .....   .......                              
T Consensus       178 ~~~~~~Dv~slG~il~~l~~g~~p~~~~~------~~~~~---~~~~~~~------------------------------  218 (257)
T cd08225         178 PYNNKTDIWSLGCVLYELCTLKHPFEGNN------LHQLV---LKICQGY------------------------------  218 (257)
T ss_pred             CCCchhhHHHHHHHHHHHHhCCCCCCCcc------HHHHH---HHHhccc------------------------------
Confidence            88999999999999999999999986442      11111   1110000                              


Q ss_pred             chhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCc
Q 026540          159 SLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL  205 (237)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f  205 (237)
                              ........+..+.+++.+||..+|++|||+.++++||||
T Consensus       219 --------~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~~~~  257 (257)
T cd08225         219 --------FAPISPNFSRDLRSLISQLFKVSPRDRPSITSILKRPFL  257 (257)
T ss_pred             --------CCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHhhCCCC
Confidence                    000122345678899999999999999999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=99.93  E-value=5.7e-26  Score=182.08  Aligned_cols=162  Identities=23%  Similarity=0.311  Sum_probs=125.4

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC---cccCcCCCcccchHHhhhc-
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ---FAEEIQTRQYRAPEVILRA-   78 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~~~~PE~~~~~-   78 (237)
                      +++..+..++.+++.+|.|+|..++.|+||+|+||+++.++.++++|||.+......   .....++..|++||.+..+ 
T Consensus        98 l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  177 (277)
T cd06917          98 IAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNSSKRSTFVGTPYWMAPEVITEGK  177 (277)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHHEEEcCCCCEEEccCCceeecCCCccccccccCCcceeCHHHhccCC
Confidence            568889999999999999999999999999999999999999999999988654322   2334678889999998754 


Q ss_pred             CCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCC
Q 026540           79 GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFW  158 (237)
Q Consensus        79 ~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (237)
                      .++.++|+||+|++++++++|..||......      ....   ......+                             
T Consensus       178 ~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~------~~~~---~~~~~~~-----------------------------  219 (277)
T cd06917         178 YYDTKADIWSLGITIYEMATGNPPYSDVDAF------RAMM---LIPKSKP-----------------------------  219 (277)
T ss_pred             ccccchhHHHHHHHHHHHHhCCCCCCCCChh------hhhh---ccccCCC-----------------------------
Confidence            4688999999999999999999999654210      0000   0000000                             


Q ss_pred             chhHHhhhhcCC-CHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccCC
Q 026540          159 SLDRLLVDKYRF-SETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNST  211 (237)
Q Consensus       159 ~~~~~~~~~~~~-~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~~  211 (237)
                               ... ....+.++.+++.+||+.||.+||++.+++.|+||......
T Consensus       220 ---------~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~il~~~~~~~~~~~  264 (277)
T cd06917         220 ---------PRLEDNGYSKLLREFVAACLDEEPKERLSAEELLKSKWIKAHSKT  264 (277)
T ss_pred             ---------CCCCcccCCHHHHHHHHHHcCCCcccCcCHHHHhhChHhhccccC
Confidence                     000 11135678899999999999999999999999999876543

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=99.93  E-value=8.2e-26  Score=179.23  Aligned_cols=152  Identities=16%  Similarity=0.151  Sum_probs=118.6

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcCcccCcCCCcccchHHhhhcCCCc
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSF   82 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~   82 (237)
                      +++..+..++.+++.+|.|+|..++.|+||||+||+++.++.++++|||++............+..|++||.+....++.
T Consensus        99 ~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  178 (256)
T cd05082          99 LGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFST  178 (256)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCEeccccchheEEEcCCCcEEecCCccceeccccCCCCccceeecCHHHHccCCCCc
Confidence            56788899999999999999999999999999999999999999999999865443333334466899999998888899


Q ss_pred             hhhhhhhhhHHHHHhc-CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCchh
Q 026540           83 SVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLD  161 (237)
Q Consensus        83 ~~diws~g~~l~~~~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (237)
                      ++|+||+|++++++++ |..||....      .......+..   .                                  
T Consensus       179 ~~Dv~slG~i~~~l~~~g~~p~~~~~------~~~~~~~~~~---~----------------------------------  215 (256)
T cd05082         179 KSDVWSFGILLWEIYSFGRVPYPRIP------LKDVVPRVEK---G----------------------------------  215 (256)
T ss_pred             hhhhHHHHHHHHHHHhCCCCCCCCCC------HHHHHHHHhc---C----------------------------------
Confidence            9999999999999997 888886432      1111110000   0                                  


Q ss_pred             HHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhc
Q 026540          162 RLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ  201 (237)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  201 (237)
                          .....+..++..+.+++.+||+.+|.+|||+.++++
T Consensus       216 ----~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~  251 (256)
T cd05082         216 ----YKMDAPDGCPPVVYDVMKQCWHLDAATRPSFLQLRE  251 (256)
T ss_pred             ----CCCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence                000122345678899999999999999999999975

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.93  E-value=8.8e-26  Score=179.86  Aligned_cols=150  Identities=17%  Similarity=0.230  Sum_probs=113.0

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCc-------EEEeecCcceecCcCcccCcCCCcccchHHh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMR-------CKVVDFGNACRANKQFAEEIQTRQYRAPEVI   75 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~-------~kl~dfg~~~~~~~~~~~~~~~~~~~~PE~~   75 (237)
                      +++..+..++.|++.||.|+|+.+++||||||+||+++.++.       ++++|||++...... ....++..|+|||.+
T Consensus       102 ~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g~~~~~~~~-~~~~~~~~y~aPE~~  180 (262)
T cd05077         102 LTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAREGIDGECGPFIKLSDPGIPITVLSR-QECVERIPWIAPECV  180 (262)
T ss_pred             CCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEecCCccCCCCceeEeCCCCCCccccCc-ccccccccccChhhh
Confidence            577889999999999999999999999999999999976553       899999987554322 234567889999988


Q ss_pred             hh-cCCCchhhhhhhhhHHHHHh-cCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhc
Q 026540           76 LR-AGYSFSVDMWSFACTAFELA-TGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIR  153 (237)
Q Consensus        76 ~~-~~~~~~~diws~g~~l~~~~-~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (237)
                      .. ..++.++|+||+|+++|+++ .|..||.....       ....   ....                           
T Consensus       181 ~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~-------~~~~---~~~~---------------------------  223 (262)
T cd05077         181 EDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTL-------AEKE---RFYE---------------------------  223 (262)
T ss_pred             cCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcch-------hHHH---HHHh---------------------------
Confidence            74 46889999999999999997 57777754320       0000   0000                           


Q ss_pred             cccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcC
Q 026540          154 RLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQH  202 (237)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h  202 (237)
                                  .........+.++.+++.+||+.||.+||++.+++++
T Consensus       224 ------------~~~~~~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~  260 (262)
T cd05077         224 ------------GQCMLVTPSCKELADLMTHCMNYDPNQRPFFRAIMRD  260 (262)
T ss_pred             ------------cCccCCCCChHHHHHHHHHHcCCChhhCcCHHHHHHh
Confidence                        0000111224678899999999999999999999864

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=99.93  E-value=7.6e-26  Score=178.93  Aligned_cols=156  Identities=20%  Similarity=0.269  Sum_probs=124.2

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC---cccCcCCCcccchHHhhhcC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ---FAEEIQTRQYRAPEVILRAG   79 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~~~~PE~~~~~~   79 (237)
                      +++.++..++.+++.+|.++|..++.|+|++|+||+++.++.++++|||.+......   .....+++.|++||.+.+..
T Consensus       100 ~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~  179 (258)
T cd08215         100 FPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTVDLAKTVVGTPYYLSPELCQNKP  179 (258)
T ss_pred             cCHHHHHHHHHHHHHHHHHHHhCCEecccCChHHeEEcCCCcEEECCccceeecccCcceecceeeeecccChhHhccCC
Confidence            677889999999999999999999999999999999999999999999988654332   22345678899999998888


Q ss_pred             CCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCc
Q 026540           80 YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWS  159 (237)
Q Consensus        80 ~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (237)
                      ++.++|+||+|++++++++|..||....      ........   ...                                
T Consensus       180 ~~~~~Dv~slG~~~~~l~~g~~p~~~~~------~~~~~~~~---~~~--------------------------------  218 (258)
T cd08215         180 YNYKSDIWSLGCVLYELCTLKHPFEGEN------LLELALKI---LKG--------------------------------  218 (258)
T ss_pred             CCccccHHHHHHHHHHHHcCCCCCCCCc------HHHHHHHH---hcC--------------------------------
Confidence            8999999999999999999999986442      11111110   000                                


Q ss_pred             hhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCc
Q 026540          160 LDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL  205 (237)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f  205 (237)
                            .....+...+..+.+++.+||+.+|.+|||+.++++||||
T Consensus       219 ------~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~~~~  258 (258)
T cd08215         219 ------QYPPIPSQYSSELRNLVSSLLQKDPEERPSIAQILQSPFI  258 (258)
T ss_pred             ------CCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHhcCCCC
Confidence                  0011122346778999999999999999999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=99.93  E-value=1.6e-25  Score=177.40  Aligned_cols=157  Identities=22%  Similarity=0.332  Sum_probs=123.2

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC--cccCcCCCcccchHHhhhcC-
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ--FAEEIQTRQYRAPEVILRAG-   79 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~--~~~~~~~~~~~~PE~~~~~~-   79 (237)
                      +++.++..++.|++.+|.|+|..++.|+||+|+||+++.++.++|+|||.+......  .....++..|++||.+.... 
T Consensus        99 ~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~  178 (258)
T cd06632          99 FPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILVDTNGVVKLADFGMAKQVVEFSFAKSFKGSPYWMAPEVIAQQGG  178 (258)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccceeccccccccccCCCcceeCHHHhcCCCC
Confidence            567888899999999999999999999999999999999999999999987643322  23445678899999987766 


Q ss_pred             CCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCc
Q 026540           80 YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWS  159 (237)
Q Consensus        80 ~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (237)
                      ++.++|+||+|++++++++|..||....      .....   ......                                
T Consensus       179 ~~~~~D~~slG~~l~~l~~g~~pf~~~~------~~~~~---~~~~~~--------------------------------  217 (258)
T cd06632         179 YGLAADIWSLGCTVLEMATGKPPWSQLE------GVAAV---FKIGRS--------------------------------  217 (258)
T ss_pred             CCchhhhHHHHHHHHHHHhCCCCcccCc------HHHHH---HHHHhc--------------------------------
Confidence            8899999999999999999999986432      11111   110000                                


Q ss_pred             hhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCc
Q 026540          160 LDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL  205 (237)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f  205 (237)
                           ......+...+..+.+|+.+||+.+|.+||++++++.|||+
T Consensus       218 -----~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~~~~  258 (258)
T cd06632         218 -----KELPPIPDHLSDEAKDFILKCLQRDPSLRPTAAELLEHPFV  258 (258)
T ss_pred             -----ccCCCcCCCcCHHHHHHHHHHhhcCcccCcCHHHHhcCCCC
Confidence                 00011223346778899999999999999999999999996

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=99.93  E-value=9.4e-26  Score=181.94  Aligned_cols=167  Identities=25%  Similarity=0.232  Sum_probs=126.7

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC----cccCcCCCcccchHHhhhc
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ----FAEEIQTRQYRAPEVILRA   78 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~----~~~~~~~~~~~~PE~~~~~   78 (237)
                      ++++.+..++.|++++|.|+|..++.|+||||+||+++.++.++++|||++......    .....++..|++||.+.+.
T Consensus       102 ~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  181 (288)
T cd05583         102 FTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILLDSEGHVVLTDFGLSKEFLAEEEERAYSFCGTIEYMAPEVIRGG  181 (288)
T ss_pred             cCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEEECccccccccccccccccccCCccccCHHHhcCC
Confidence            567889999999999999999999999999999999999999999999987543322    1123568899999998765


Q ss_pred             C--CCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcccc
Q 026540           79 G--YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLK  156 (237)
Q Consensus        79 ~--~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (237)
                      .  .+.++|+||+|++++++++|..||......      .....+.+..                               
T Consensus       182 ~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~------~~~~~~~~~~-------------------------------  224 (288)
T cd05583         182 SGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQ------NSQSEISRRI-------------------------------  224 (288)
T ss_pred             CCCCcchhhhHHHHHHHHHHHhCCCCcccCccc------chHHHHHHHH-------------------------------
Confidence            4  678999999999999999999998643210      0001110000                               


Q ss_pred             CCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCC---HHHHhcCCCcCcccCCcc
Q 026540          157 FWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPT---AQQCLQHPWLSLRNSTRD  213 (237)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t---~~ell~hp~f~~~~~~~~  213 (237)
                             .......+..++..+.+++.+||+.||++|||   +.++|+||||+.++++..
T Consensus       225 -------~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~~~~~~~~~~~  277 (288)
T cd05583         225 -------LKSKPPFPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNHPFFQGIDWDDL  277 (288)
T ss_pred             -------HccCCCCCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcCcccccCCHHHH
Confidence                   00011123335677889999999999999998   567899999998876544

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=99.93  E-value=1.6e-25  Score=177.84  Aligned_cols=155  Identities=19%  Similarity=0.288  Sum_probs=121.7

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC---cccCcCCCcccchHHhhhcC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ---FAEEIQTRQYRAPEVILRAG   79 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~~~~PE~~~~~~   79 (237)
                      +++.++..++.|++.||.|+|..++.|+|+||+||+++. +.++++|||.+......   .....++..|++||.+.+..
T Consensus       103 ~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nili~~-~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~  181 (260)
T cd08222         103 LSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFLKN-NLLKIGDFGVSRLLMGSCDLATTFTGTPYYMSPEALKHQG  181 (260)
T ss_pred             cCHHHHHHHHHHHHHHHHHHHHcCccccCCChhheEeec-CCEeecccCceeecCCCcccccCCCCCcCccCHHHHccCC
Confidence            678899999999999999999999999999999999976 46999999988654321   22345678899999988777


Q ss_pred             CCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCc
Q 026540           80 YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWS  159 (237)
Q Consensus        80 ~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (237)
                      ++.++|+||+|++++++++|..||....      .   ..........                                
T Consensus       182 ~~~~~Dv~slG~~~~~l~~~~~~~~~~~------~---~~~~~~~~~~--------------------------------  220 (260)
T cd08222         182 YDSKSDIWSLGCILYEMCCLAHAFEGQN------F---LSVVLRIVEG--------------------------------  220 (260)
T ss_pred             CCchhhHHHHHHHHHHHHhCCCCCCCcc------H---HHHHHHHHcC--------------------------------
Confidence            8889999999999999999999885432      1   1111111100                                


Q ss_pred             hhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCc
Q 026540          160 LDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL  205 (237)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f  205 (237)
                            .....+...+..+.+++.+||+.+|++||++.++++||||
T Consensus       221 ------~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~  260 (260)
T cd08222         221 ------PTPSLPETYSRQLNSIMQSMLNKDPSLRPSAAEILRNPFI  260 (260)
T ss_pred             ------CCCCCcchhcHHHHHHHHHHhcCChhhCcCHHHHhhCCCC
Confidence                  0011233456788999999999999999999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=99.93  E-value=8.6e-26  Score=178.45  Aligned_cols=156  Identities=28%  Similarity=0.383  Sum_probs=124.5

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcCc---ccCcCCCcccchHHhhhcC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQF---AEEIQTRQYRAPEVILRAG   79 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~~---~~~~~~~~~~~PE~~~~~~   79 (237)
                      +++..+..++.|++.+|.++|..++.|+|+||+||+++.++.++|+|||.+.......   ....++..|++||......
T Consensus        96 l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~  175 (254)
T cd06627          96 FPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKDDASVVGTPYWMAPEVIEMSG  175 (254)
T ss_pred             CCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEECCCCCEEEeccccceecCCCcccccccccchhhcCHhhhcCCC
Confidence            5788899999999999999999999999999999999999999999999886544322   2345678899999998777


Q ss_pred             CCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCc
Q 026540           80 YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWS  159 (237)
Q Consensus        80 ~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (237)
                      .+.++|+|++|++++++++|..||....      .....   ....                                  
T Consensus       176 ~~~~~Dv~~lG~~l~~l~~g~~p~~~~~------~~~~~---~~~~----------------------------------  212 (254)
T cd06627         176 ASTASDIWSLGCTVIELLTGNPPYYDLN------PMAAL---FRIV----------------------------------  212 (254)
T ss_pred             CCcchhHHHHHHHHHHHHhCCCCCCCcc------HHHHH---HHHh----------------------------------
Confidence            8899999999999999999999886442      11111   1100                                  


Q ss_pred             hhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCc
Q 026540          160 LDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL  205 (237)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f  205 (237)
                          .......+...+..+.+++.+||..+|++|||+.+++.||||
T Consensus       213 ----~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~~~  254 (254)
T cd06627         213 ----QDDHPPLPEGISPELKDFLMQCFQKDPNLRPTAKQLLKHPWI  254 (254)
T ss_pred             ----ccCCCCCCCCCCHHHHHHHHHHHhCChhhCcCHHHHhcCCCC
Confidence                000111233446788999999999999999999999999997

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.93  E-value=2.5e-26  Score=192.12  Aligned_cols=161  Identities=22%  Similarity=0.301  Sum_probs=138.4

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecC--cCcccCcCCCcccchHHhhhcCC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRAN--KQFAEEIQTRQYRAPEVILRAGY   80 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~--~~~~~~~~~~~~~~PE~~~~~~~   80 (237)
                      ++|..++.++.|++.+++|+|...++|||||.+|||++++..+||+|||++..+.  ......+|++.|.|||++.+..|
T Consensus       152 ~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~~~~lqt~cgsppyAaPEl~~g~~y  231 (596)
T KOG0586|consen  152 MKEKEARAKFRQIVSAVEYCHSKNIVHRDLKAENILLDENMNIKIADFGFSTFFDYGLMLQTFCGSPPYAAPELFNGKKY  231 (596)
T ss_pred             chhhhhhhhhHHHHHHHHHHhhcceeccccchhhcccccccceeeeccccceeecccccccccCCCCCccChHhhcCccc
Confidence            3568899999999999999999999999999999999999999999999996554  34567799999999999999887


Q ss_pred             -CchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCc
Q 026540           81 -SFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWS  159 (237)
Q Consensus        81 -~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (237)
                       ++.+|+||+|+++|.++.|..||.+.+...                                                -
T Consensus       232 ~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~------------------------------------------------L  263 (596)
T KOG0586|consen  232 DGPEVDIWSLGVVLYALVEGSLPFDGQNLKE------------------------------------------------L  263 (596)
T ss_pred             CCcceehhhhhhhheeeeecccccCCccccc------------------------------------------------c
Confidence             678999999999999999999998764110                                                0


Q ss_pred             hhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccCC
Q 026540          160 LDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNST  211 (237)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~~  211 (237)
                      ..+.+...++.+.-++.++.++|+++|..+|.+|++.++++.|.|.......
T Consensus       264 r~rvl~gk~rIp~~ms~dce~lLrk~lvl~Pskr~~~dqim~~~W~n~~~~~  315 (596)
T KOG0586|consen  264 RPRVLRGKYRIPFYMSCDCEDLLRKFLVLNPSKRGPCDQIMKDRWRNDLLEA  315 (596)
T ss_pred             cchheeeeecccceeechhHHHHHHhhccCccccCCHHHhhhhcccchhhhh
Confidence            2233445566777788999999999999999999999999999999977554

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=99.93  E-value=1.2e-25  Score=180.48  Aligned_cols=152  Identities=17%  Similarity=0.155  Sum_probs=116.7

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcCc-----ccCcCCCcccchHHhhh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQF-----AEEIQTRQYRAPEVILR   77 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~~-----~~~~~~~~~~~PE~~~~   77 (237)
                      +++..+..++.|++.||.|+|+.+++||||||+||+++.++.++|+|||++.......     ....++..|++||.+.+
T Consensus       106 ~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~  185 (279)
T cd05109         106 IGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILH  185 (279)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcCCCcEEECCCCceeecccccceeecCCCccchhhCCHHHhcc
Confidence            5678899999999999999999999999999999999999999999999986543211     11233567999999988


Q ss_pred             cCCCchhhhhhhhhHHHHHhc-CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcccc
Q 026540           78 AGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLK  156 (237)
Q Consensus        78 ~~~~~~~diws~g~~l~~~~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (237)
                      ..++.++|+||+|++++++++ |..||....      .. .+........                              
T Consensus       186 ~~~~~~~Di~slG~~l~el~t~g~~p~~~~~------~~-~~~~~~~~~~------------------------------  228 (279)
T cd05109         186 RRFTHQSDVWSYGVTVWELMTFGAKPYDGIP------AR-EIPDLLEKGE------------------------------  228 (279)
T ss_pred             CCCCchhHHHHHHHHHHHHHcCCCCCCCCCC------HH-HHHHHHHCCC------------------------------
Confidence            889999999999999999988 888886432      11 1111100000                              


Q ss_pred             CCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhc
Q 026540          157 FWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ  201 (237)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  201 (237)
                                ....+...+..+.+++.+||+.||++||++.++++
T Consensus       229 ----------~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~  263 (279)
T cd05109         229 ----------RLPQPPICTIDVYMIMVKCWMIDSECRPRFRELVD  263 (279)
T ss_pred             ----------cCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence                      00112234567889999999999999999999984

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=99.93  E-value=1.3e-25  Score=182.93  Aligned_cols=160  Identities=23%  Similarity=0.223  Sum_probs=124.3

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcCcccCcCCCcccchHHhhh---cC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILR---AG   79 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~PE~~~~---~~   79 (237)
                      +++.++..++.|++.++.|+|..++.|+||||+||+++.++.++++|||++...... ....++..|++||.+.+   ..
T Consensus       112 l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~  190 (308)
T cd06634         112 LQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA-NXFVGTPYWMAPEVILAMDEGQ  190 (308)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHhEEECCCCcEEECCcccceeecCc-ccccCCccccCHHHHhhcccCC
Confidence            567889999999999999999999999999999999999999999999988654332 23466789999999863   35


Q ss_pred             CCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCc
Q 026540           80 YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWS  159 (237)
Q Consensus        80 ~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (237)
                      ++.++|+||+|++++++++|..||....      ..........  +..                               
T Consensus       191 ~~~~~Di~slG~il~el~~g~~p~~~~~------~~~~~~~~~~--~~~-------------------------------  231 (308)
T cd06634         191 YDGKVDVWSLGITCIELAERKPPLFNMN------AMSALYHIAQ--NES-------------------------------  231 (308)
T ss_pred             CCcccchHHHHHHHHHHHcCCCCCcccc------HHHHHHHHhh--cCC-------------------------------
Confidence            7889999999999999999999886432      1111111100  000                               


Q ss_pred             hhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCccc
Q 026540          160 LDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRN  209 (237)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~  209 (237)
                             ........+..+.+||.+||..+|.+||+++++++|||+....
T Consensus       232 -------~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~~~~~~  274 (308)
T cd06634         232 -------PALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRER  274 (308)
T ss_pred             -------CCcCcccccHHHHHHHHHHhhCCcccCCCHHHHhhCccccccC
Confidence                   0001223456788999999999999999999999999999753

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=99.93  E-value=1.8e-25  Score=179.96  Aligned_cols=169  Identities=22%  Similarity=0.229  Sum_probs=125.4

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhh-hcCCccCCCCCccccCCCCcEEEeecCcceecCc-CcccCcCCCcccchHHhhhcCC
Q 026540            3 IVEKKLKRRAKRAVANISIRRA-SMGGIELPKPERCLDGIDMRCKVVDFGNACRANK-QFAEEIQTRQYRAPEVILRAGY   80 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~-~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~-~~~~~~~~~~~~~PE~~~~~~~   80 (237)
                      +++..+..++.+++.+|.|+|. .+++|+||||+||+++.++.++++|||++..... ......++..|++||++.+..+
T Consensus       100 ~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~~~~~~~~~~~~~aPE~~~~~~~  179 (284)
T cd06620         100 IPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNSRGQIKLCDFGVSGELINSIADTFVGTSTYMSPERIQGGKY  179 (284)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEECCCCcEEEccCCcccchhhhccCccccCcccCCHHHHccCCC
Confidence            4677889999999999999997 5789999999999999999999999998754322 2234467889999999988888


Q ss_pred             CchhhhhhhhhHHHHHhcCCcccCCCCCCCCC--ChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCC
Q 026540           81 SFSVDMWSFACTAFELATGDMLFAPKSGQGFC--EDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFW  158 (237)
Q Consensus        81 ~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (237)
                      +.++|+||+||+++++++|..||.........  ...............                               
T Consensus       180 ~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------------  228 (284)
T cd06620         180 TVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQE-------------------------------  228 (284)
T ss_pred             CccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhc-------------------------------
Confidence            99999999999999999999999755311000  000000000000000                               


Q ss_pred             chhHHhhhhcCCC-HHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCccc
Q 026540          159 SLDRLLVDKYRFS-ETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRN  209 (237)
Q Consensus       159 ~~~~~~~~~~~~~-~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~  209 (237)
                             .....+ ..++..+.+|+.+||+.||.+|||++|+++|+||....
T Consensus       229 -------~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~~~~~~~  273 (284)
T cd06620         229 -------PPPRLPSSDFPEDLRDFVDACLLKDPTERPTPQQLCAMPPFIQAL  273 (284)
T ss_pred             -------cCCCCCchhcCHHHHHHHHHHhcCCcccCcCHHHHhcCccccccc
Confidence                   000011 12456788999999999999999999999999997643

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=99.93  E-value=1.2e-25  Score=180.42  Aligned_cols=161  Identities=22%  Similarity=0.269  Sum_probs=126.2

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC---cccCcCCCcccchHHhhhcC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ---FAEEIQTRQYRAPEVILRAG   79 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~~~~PE~~~~~~   79 (237)
                      +++.++..++.+++.++.++|..++.|+|+||+||+++.++.++++|||++......   .....++..|++||.+.+..
T Consensus        98 ~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~  177 (277)
T cd06641          98 LDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSA  177 (277)
T ss_pred             CCHHHHHHHHHHHHHHHHHHccCCeecCCCCHHhEEECCCCCEEEeecccceecccchhhhccccCCccccChhhhccCC
Confidence            567889999999999999999999999999999999999999999999987544321   22345678899999998878


Q ss_pred             CCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCc
Q 026540           80 YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWS  159 (237)
Q Consensus        80 ~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (237)
                      ++.++|+||+|++++++++|..||....      .......+   ....                               
T Consensus       178 ~~~~~Dv~slG~~l~~l~~g~~p~~~~~------~~~~~~~~---~~~~-------------------------------  217 (277)
T cd06641         178 YDSKADIWSLGITAIELAKGEPPHSELH------PMKVLFLI---PKNN-------------------------------  217 (277)
T ss_pred             CCchhhHHHHHHHHHHHHcCCCCCCccc------hHHHHHHH---hcCC-------------------------------
Confidence            8899999999999999999999986432      11111100   0000                               


Q ss_pred             hhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccC
Q 026540          160 LDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNS  210 (237)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~  210 (237)
                             ........+..+.+++.+||+.+|.+||+++++++||||.....
T Consensus       218 -------~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~~~~~~~  261 (277)
T cd06641         218 -------PPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFIVRFAK  261 (277)
T ss_pred             -------CCCCCcccCHHHHHHHHHHccCChhhCcCHHHHHhCHHHhhhhh
Confidence                   00112234577889999999999999999999999999997543

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=99.93  E-value=8.3e-26  Score=183.71  Aligned_cols=153  Identities=14%  Similarity=0.141  Sum_probs=117.2

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcCcc--cCcCCCcccchHHhhhcCC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQFA--EEIQTRQYRAPEVILRAGY   80 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~~~--~~~~~~~~~~PE~~~~~~~   80 (237)
                      +++.++..++.|++.||.|+|..++.||||||+||+++.++.++|+|||++........  ....+..|++||.+.+..+
T Consensus       121 l~~~~~~~~~~qi~~al~~LH~~gi~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  200 (303)
T cd05088         121 LSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVY  200 (303)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEecCCCcEEeCccccCcccchhhhcccCCCcccccCHHHHhccCC
Confidence            57888999999999999999999999999999999999999999999998853221111  1223457999999988888


Q ss_pred             CchhhhhhhhhHHHHHhc-CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCc
Q 026540           81 SFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWS  159 (237)
Q Consensus        81 ~~~~diws~g~~l~~~~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (237)
                      +.++|+||+|++++++++ |..||....      ..+....+   ....                               
T Consensus       201 ~~~~Di~slG~il~ellt~g~~p~~~~~------~~~~~~~~---~~~~-------------------------------  240 (303)
T cd05088         201 TTNSDVWSYGVLLWEIVSLGGTPYCGMT------CAELYEKL---PQGY-------------------------------  240 (303)
T ss_pred             cccccchhhhhHHHHHHhcCCCCcccCC------hHHHHHHH---hcCC-------------------------------
Confidence            999999999999999997 899986542      11111110   0000                               


Q ss_pred             hhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcC
Q 026540          160 LDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQH  202 (237)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h  202 (237)
                             ....+...+..+.+++.+||+.+|.+||++++++++
T Consensus       241 -------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  276 (303)
T cd05088         241 -------RLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS  276 (303)
T ss_pred             -------cCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence                   000122345678899999999999999999999985

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=99.93  E-value=2.1e-25  Score=182.17  Aligned_cols=160  Identities=23%  Similarity=0.263  Sum_probs=123.7

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcCcccCcCCCcccchHHhh---hcC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVIL---RAG   79 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~PE~~~---~~~   79 (237)
                      +++.++..++.|++.++.|+|..++.|+||+|+||+++.++.++|+|||++.... ......++..|++||.+.   ...
T Consensus       118 l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~  196 (313)
T cd06633         118 LQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASKSS-PANSFVGTPYWMAPEVILAMDEGQ  196 (313)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCeecCCCChhhEEECCCCCEEEeecCCCcccC-CCCCccccccccChhhccccCCCC
Confidence            5678889999999999999999999999999999999999999999999875432 223456788999999985   345


Q ss_pred             CCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCc
Q 026540           80 YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWS  159 (237)
Q Consensus        80 ~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (237)
                      ++.++|+||+|++++++++|..||....      .......+..  ...+                              
T Consensus       197 ~~~~sDv~slGvil~el~~g~~p~~~~~------~~~~~~~~~~--~~~~------------------------------  238 (313)
T cd06633         197 YDGKVDVWSLGITCIELAERKPPLFNMN------AMSALYHIAQ--NDSP------------------------------  238 (313)
T ss_pred             CCchhhHHHHHHHHHHHHhCCCCCCCCC------hHHHHHHHHh--cCCC------------------------------
Confidence            7889999999999999999999987542      1111111100  0000                              


Q ss_pred             hhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCccc
Q 026540          160 LDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRN  209 (237)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~  209 (237)
                              .......+..+.+|+.+||+.+|.+||++.+++.||||....
T Consensus       239 --------~~~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~~~~~~~~  280 (313)
T cd06633         239 --------TLQSNEWTDSFRGFVDYCLQKIPQERPASAELLRHDFVRRDR  280 (313)
T ss_pred             --------CCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCcccCCCc
Confidence                    000112345688999999999999999999999999999644

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=99.93  E-value=1.3e-25  Score=180.17  Aligned_cols=153  Identities=18%  Similarity=0.263  Sum_probs=117.1

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCC---cEEEeecCcceecCcCc-----ccCcCCCcccchHH
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDM---RCKVVDFGNACRANKQF-----AEEIQTRQYRAPEV   74 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~---~~kl~dfg~~~~~~~~~-----~~~~~~~~~~~PE~   74 (237)
                      +++.++..++.|++.+|.|+|..+++|+||||+||+++.++   .++++|||++.......     .....+..|++||+
T Consensus       113 ~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~  192 (277)
T cd05036         113 LTMKDLLFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKGPGRVAKIADFGMARDIYRASYYRKGGRAMLPIKWMPPEA  192 (277)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCEeecccchheEEEeccCCCcceEeccCccccccCCccceecCCCCCccHhhCCHHH
Confidence            67888999999999999999999999999999999998654   68999999986543211     12223457999999


Q ss_pred             hhhcCCCchhhhhhhhhHHHHHhc-CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhc
Q 026540           75 ILRAGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIR  153 (237)
Q Consensus        75 ~~~~~~~~~~diws~g~~l~~~~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (237)
                      +.+..++.++|+||+||+++++++ |..||....      .......+   ...                          
T Consensus       193 ~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~------~~~~~~~~---~~~--------------------------  237 (277)
T cd05036         193 FLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRT------NQEVMEFV---TGG--------------------------  237 (277)
T ss_pred             HhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCC------HHHHHHHH---HcC--------------------------
Confidence            998889999999999999999996 888887543      11111110   000                          


Q ss_pred             cccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcC
Q 026540          154 RLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQH  202 (237)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h  202 (237)
                                  .....+..++..+.+++.+||+.+|++|||+.++++|
T Consensus       238 ------------~~~~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~  274 (277)
T cd05036         238 ------------GRLDPPKGCPGPVYRIMTDCWQHTPEDRPNFATILER  274 (277)
T ss_pred             ------------CcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence                        0001123346778899999999999999999999976

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=99.93  E-value=1.3e-25  Score=179.38  Aligned_cols=153  Identities=16%  Similarity=0.185  Sum_probs=118.0

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcCc-----ccCcCCCcccchHHhhh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQF-----AEEIQTRQYRAPEVILR   77 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~~-----~~~~~~~~~~~PE~~~~   77 (237)
                      +++..+..++.|++.||.|+|..+++|+||||+||+++.++.++|+|||++.......     ....++..|++||.+..
T Consensus       110 ~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~  189 (273)
T cd05035         110 LPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCMLREDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLAD  189 (273)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEECCCCeEEECCccceeeccccccccccccccCCccccCHhhccc
Confidence            5678889999999999999999999999999999999999999999999986543221     11223567999999987


Q ss_pred             cCCCchhhhhhhhhHHHHHhc-CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcccc
Q 026540           78 AGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLK  156 (237)
Q Consensus        78 ~~~~~~~diws~g~~l~~~~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (237)
                      ..++.++|+||+|++++++++ |..||.+..      .......+   ...                             
T Consensus       190 ~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~------~~~~~~~~---~~~-----------------------------  231 (273)
T cd05035         190 RVYTSKSDVWAFGVTMWEIATRGQTPYPGVE------NHEIYDYL---RHG-----------------------------  231 (273)
T ss_pred             CCCCcccchHHHHHHHHHHHhCCCCCCCCCC------HHHHHHHH---HcC-----------------------------
Confidence            888999999999999999998 778886542      11111111   000                             


Q ss_pred             CCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcC
Q 026540          157 FWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQH  202 (237)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h  202 (237)
                               .....+..++..+.+++.+||+.||.+|||+.+++++
T Consensus       232 ---------~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~  268 (273)
T cd05035         232 ---------NRLKQPEDCLDELYDLMYSCWRADPKDRPTFTKLREV  268 (273)
T ss_pred             ---------CCCCCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence                     0011223456788999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=99.93  E-value=2e-25  Score=177.73  Aligned_cols=152  Identities=18%  Similarity=0.213  Sum_probs=117.3

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcCcc----cCcCCCcccchHHhhhc
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQFA----EEIQTRQYRAPEVILRA   78 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~~~----~~~~~~~~~~PE~~~~~   78 (237)
                      +++..+..++.|++.+|.|+|..++.|+||||+||+++.++.++++|||++........    ....+..|++||.+.+.
T Consensus       101 l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  180 (263)
T cd05052         101 VNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYN  180 (263)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCcEEeCCCccccccccceeeccCCCCCccccCCHHHhccC
Confidence            56778889999999999999999999999999999999999999999998865443211    11224579999999888


Q ss_pred             CCCchhhhhhhhhHHHHHhc-CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccC
Q 026540           79 GYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKF  157 (237)
Q Consensus        79 ~~~~~~diws~g~~l~~~~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (237)
                      .++.++|+||+|++++++++ |..||.+..      .......+..   ..                             
T Consensus       181 ~~~~~~Dv~slG~il~el~t~g~~p~~~~~------~~~~~~~~~~---~~-----------------------------  222 (263)
T cd05052         181 KFSIKSDVWAFGVLLWEIATYGMSPYPGID------LSQVYELLEK---GY-----------------------------  222 (263)
T ss_pred             CCCchhHHHHHHHHHHHHHcCCCCCCCCCC------HHHHHHHHHC---CC-----------------------------
Confidence            89999999999999999998 888886542      1111111100   00                             


Q ss_pred             CchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhc
Q 026540          158 WSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ  201 (237)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  201 (237)
                               ....+...+..+.+++.+||+.+|++|||+.++++
T Consensus       223 ---------~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~  257 (263)
T cd05052         223 ---------RMERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQ  257 (263)
T ss_pred             ---------CCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence                     01122345678999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=99.93  E-value=1.3e-25  Score=181.46  Aligned_cols=153  Identities=20%  Similarity=0.243  Sum_probs=117.7

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC-----cccCcCCCcccchHHhhh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ-----FAEEIQTRQYRAPEVILR   77 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~-----~~~~~~~~~~~~PE~~~~   77 (237)
                      +++..+.+++.|++.||.|+|..+++|+||||+||+++.++.++++|||++......     .....++..|++||.+.+
T Consensus       129 l~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  208 (293)
T cd05053         129 LTQKDLVSFAYQVARGMEFLASKKCIHRDLAARNVLVTEDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFD  208 (293)
T ss_pred             cCHHHHHHHHHHHHHHHHHHHHCCccccccceeeEEEcCCCeEEeCccccccccccccceeccCCCCCCccccCHHHhcc
Confidence            567788999999999999999999999999999999999999999999988654321     112233567999999988


Q ss_pred             cCCCchhhhhhhhhHHHHHhc-CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcccc
Q 026540           78 AGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLK  156 (237)
Q Consensus        78 ~~~~~~~diws~g~~l~~~~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (237)
                      ..++.++|+||+|++++++++ |..||....      .......+...                                
T Consensus       209 ~~~~~~~Di~slG~il~el~~~g~~p~~~~~------~~~~~~~~~~~--------------------------------  250 (293)
T cd05053         209 RVYTHQSDVWSFGVLLWEIFTLGGSPYPGIP------VEELFKLLKEG--------------------------------  250 (293)
T ss_pred             CCcCcccceeehhhHHHHHhcCCCCCCCCCC------HHHHHHHHHcC--------------------------------
Confidence            889999999999999999997 888886542      11111111000                                


Q ss_pred             CCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcC
Q 026540          157 FWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQH  202 (237)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h  202 (237)
                               .....+...+..+.+|+.+||..||.+|||+++++++
T Consensus       251 ---------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~  287 (293)
T cd05053         251 ---------YRMEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVED  287 (293)
T ss_pred             ---------CcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence                     0001122345678899999999999999999999864

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=99.93  E-value=2.5e-25  Score=175.91  Aligned_cols=158  Identities=27%  Similarity=0.362  Sum_probs=125.9

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC-----cccCcCCCcccchHHhhh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ-----FAEEIQTRQYRAPEVILR   77 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~-----~~~~~~~~~~~~PE~~~~   77 (237)
                      +++.++..++.+++.+|.|+|..++.|+|++|+||+++.++.++|+|||.+......     .....++..|++||....
T Consensus        98 ~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~  177 (260)
T cd06606          98 LPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETGEGTGSVRGTPYWMAPEVIRG  177 (260)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEcccccEEecccccccccccCCCCCccccCHhhhcC
Confidence            567888999999999999999999999999999999999999999999988654432     234567789999999988


Q ss_pred             cCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccC
Q 026540           78 AGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKF  157 (237)
Q Consensus        78 ~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (237)
                      ...+.++|+||+|++++++++|..||....        .......+...                               
T Consensus       178 ~~~~~~~Dv~slG~il~~l~~g~~p~~~~~--------~~~~~~~~~~~-------------------------------  218 (260)
T cd06606         178 EEYGRAADIWSLGCTVIEMATGKPPWSELG--------NPMAALYKIGS-------------------------------  218 (260)
T ss_pred             CCCCchhhHHHHHHHHHHHHhCCCCCCCCC--------chHHHHHhccc-------------------------------
Confidence            888999999999999999999999986542        11111111100                               


Q ss_pred             CchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCc
Q 026540          158 WSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL  205 (237)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f  205 (237)
                            .......+...+..+.+|+.+||..+|.+||++.++++||||
T Consensus       219 ------~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~~~~~  260 (260)
T cd06606         219 ------SGEPPEIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQHPFL  260 (260)
T ss_pred             ------cCCCcCCCcccCHHHHHHHHHhCcCChhhCCCHHHHhhCCCC
Confidence                  000111233446789999999999999999999999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=99.93  E-value=1.5e-25  Score=180.60  Aligned_cols=163  Identities=28%  Similarity=0.375  Sum_probs=125.8

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC---cccCcCCCcccchHHhhhc
Q 026540            2 TIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ---FAEEIQTRQYRAPEVILRA   78 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~~~~PE~~~~~   78 (237)
                      .+++.++..++.+++.+|.|+|..++.|+|++|+||+++.++.++|+|||.+......   .....++..|++||.+.+.
T Consensus       112 ~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~  191 (286)
T cd06614         112 RMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKSKRNSVVGTPYWMAPEVIKRK  191 (286)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCChhhEEEcCCCCEEECccchhhhhccchhhhccccCCcccCCHhHhcCC
Confidence            3677889999999999999999999999999999999999999999999987543321   1233567789999999888


Q ss_pred             CCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCC
Q 026540           79 GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFW  158 (237)
Q Consensus        79 ~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (237)
                      .++.++|+||+|++++++++|..||....      .......+..  ...+                             
T Consensus       192 ~~~~~~Dv~slGvil~~l~~g~~p~~~~~------~~~~~~~~~~--~~~~-----------------------------  234 (286)
T cd06614         192 DYGPKVDIWSLGIMCIEMAEGEPPYLREP------PLRALFLITT--KGIP-----------------------------  234 (286)
T ss_pred             CCCCccccHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHh--cCCC-----------------------------
Confidence            88999999999999999999999986432      1111111000  0000                             


Q ss_pred             chhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCccc
Q 026540          159 SLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRN  209 (237)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~  209 (237)
                              .......++..+.+|+.+||+.+|.+|||+.++++|+||+...
T Consensus       235 --------~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~  277 (286)
T cd06614         235 --------PLKNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQHPFLKKAC  277 (286)
T ss_pred             --------CCcchhhCCHHHHHHHHHHhccChhhCcCHHHHhhChHhhccC
Confidence                    0001112456788999999999999999999999999999744

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=99.93  E-value=1.9e-25  Score=177.26  Aligned_cols=152  Identities=13%  Similarity=0.151  Sum_probs=118.1

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcCc------ccCcCCCcccchHHhh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQF------AEEIQTRQYRAPEVIL   76 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~~------~~~~~~~~~~~PE~~~   76 (237)
                      +++..+..++.|++.+|.|+|..++.|+||||+||+++.++.++|+|||++.......      ....++..|++||.+.
T Consensus        92 ~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  171 (257)
T cd05116          92 VTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKAKTHGKWPVKWYAPECMN  171 (257)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEEcCCCeEEECCCccccccCCCCCeeeecCCCCCCccccCHhHhc
Confidence            5788899999999999999999999999999999999999999999999986543221      1223356899999998


Q ss_pred             hcCCCchhhhhhhhhHHHHHhc-CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccc
Q 026540           77 RAGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRL  155 (237)
Q Consensus        77 ~~~~~~~~diws~g~~l~~~~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (237)
                      ...++.++|+||+|++++++++ |..||....      .......+...                               
T Consensus       172 ~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~------~~~~~~~i~~~-------------------------------  214 (257)
T cd05116         172 YYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMK------GNEVTQMIESG-------------------------------  214 (257)
T ss_pred             cCCcCchhHHHHHHHHHHHHHhCCCCCCCCCC------HHHHHHHHHCC-------------------------------
Confidence            7788899999999999999997 889986542      11111111000                               


Q ss_pred             cCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhc
Q 026540          156 KFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ  201 (237)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  201 (237)
                                .....+..++.++.++|.+|++.||++||++.++.+
T Consensus       215 ----------~~~~~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~  250 (257)
T cd05116         215 ----------ERMECPQRCPPEMYDLMKLCWTYGVDERPGFAVVEL  250 (257)
T ss_pred             ----------CCCCCCCCCCHHHHHHHHHHhccCchhCcCHHHHHH
Confidence                      001123345678899999999999999999998865

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=99.93  E-value=1.9e-25  Score=178.95  Aligned_cols=152  Identities=19%  Similarity=0.292  Sum_probs=118.2

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC-----cccCcCCCcccchHHhhh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ-----FAEEIQTRQYRAPEVILR   77 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~-----~~~~~~~~~~~~PE~~~~   77 (237)
                      +++.++..++.|++.||.|+|..+++|+||||+||+++.++.++|+|||++......     .....++..|++||.+.+
T Consensus       116 ~~~~~~~~~~~~i~~~l~~lH~~~i~H~di~p~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  195 (277)
T cd05032         116 PTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMVAEDLTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKD  195 (277)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCccccccChheEEEcCCCCEEECCcccchhhccCcccccCCCCCccccccCHHHHhc
Confidence            456788999999999999999999999999999999999999999999987543221     123345678999999988


Q ss_pred             cCCCchhhhhhhhhHHHHHhc-CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcccc
Q 026540           78 AGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLK  156 (237)
Q Consensus        78 ~~~~~~~diws~g~~l~~~~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (237)
                      ..++.++|+||+|++++++++ |..||...+      .......+.  .+                              
T Consensus       196 ~~~~~~~Di~slG~il~el~t~g~~p~~~~~------~~~~~~~~~--~~------------------------------  237 (277)
T cd05032         196 GVFTTKSDVWSFGVVLWEMATLAEQPYQGLS------NEEVLKFVI--DG------------------------------  237 (277)
T ss_pred             CCCCcccchHHHHHHHHHhhccCCCCCccCC------HHHHHHHHh--cC------------------------------
Confidence            889999999999999999998 888886542      111111110  00                              


Q ss_pred             CCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhc
Q 026540          157 FWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ  201 (237)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  201 (237)
                               .....+..++..+.+++.+||+.+|++|||+.++++
T Consensus       238 ---------~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~  273 (277)
T cd05032         238 ---------GHLDLPENCPDKLLELMRMCWQYNPKMRPTFLEIVS  273 (277)
T ss_pred             ---------CCCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence                     001123334678899999999999999999999985

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=99.93  E-value=2.1e-25  Score=178.88  Aligned_cols=152  Identities=18%  Similarity=0.256  Sum_probs=116.3

Q ss_pred             hHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcCc-----ccCcCCCcccchHHhhhc
Q 026540            4 VEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQF-----AEEIQTRQYRAPEVILRA   78 (237)
Q Consensus         4 ~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~~-----~~~~~~~~~~~PE~~~~~   78 (237)
                      +..++..++.|++.+|.|+|..+++|+||||+||+++.++.++++|||++.......     ....++..|++||.+.+.
T Consensus       117 ~~~~~~~~~~~l~~~l~~lH~~~~vH~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  196 (277)
T cd05062         117 SLKKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDG  196 (277)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHCCcccCCcchheEEEcCCCCEEECCCCCccccCCcceeecCCCCccCHhhcChhHhhcC
Confidence            456788899999999999999999999999999999999999999999885432211     122346679999999888


Q ss_pred             CCCchhhhhhhhhHHHHHhc-CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccC
Q 026540           79 GYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKF  157 (237)
Q Consensus        79 ~~~~~~diws~g~~l~~~~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (237)
                      .++.++|+||+|++++++++ |..||....      ...........  .                              
T Consensus       197 ~~~~~~Di~slG~~l~el~~~~~~p~~~~~------~~~~~~~~~~~--~------------------------------  238 (277)
T cd05062         197 VFTTYSDVWSFGVVLWEIATLAEQPYQGMS------NEQVLRFVMEG--G------------------------------  238 (277)
T ss_pred             CcCchhHHHHHHHHHHHHHcCCCCCCCCCC------HHHHHHHHHcC--C------------------------------
Confidence            89999999999999999998 677876442      11111111000  0                              


Q ss_pred             CchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcC
Q 026540          158 WSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQH  202 (237)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h  202 (237)
                               ....+..++..+.+++.+||+.+|++|||+.+++++
T Consensus       239 ---------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~  274 (277)
T cd05062         239 ---------LLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISS  274 (277)
T ss_pred             ---------cCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence                     001123345678999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=99.93  E-value=2.5e-25  Score=177.38  Aligned_cols=156  Identities=19%  Similarity=0.191  Sum_probs=120.0

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC---cccCcCCCcccchHHhhhcC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ---FAEEIQTRQYRAPEVILRAG   79 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~~~~PE~~~~~~   79 (237)
                      +++.++..++.+++.||.|+|..++.|+||||+||+++.++.++++|||++......   .....++..|++||.+.+..
T Consensus       103 ~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~  182 (267)
T cd08228         103 IPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENG  182 (267)
T ss_pred             CCHHHHHHHHHHHHHHHHHHhhCCeeCCCCCHHHEEEcCCCCEEECccccceeccchhHHHhcCCCCccccChhhhccCC
Confidence            567889999999999999999999999999999999999999999999988654422   22345678899999998888


Q ss_pred             CCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCc
Q 026540           80 YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWS  159 (237)
Q Consensus        80 ~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (237)
                      ++.++|+||+|++++++++|..||....     .+...........+.+                               
T Consensus       183 ~~~~~Di~slG~~l~el~~g~~p~~~~~-----~~~~~~~~~~~~~~~~-------------------------------  226 (267)
T cd08228         183 YNFKSDIWSLGCLLYEMAALQSPFYGDK-----MNLFSLCQKIEQCDYP-------------------------------  226 (267)
T ss_pred             CCchhhHHHHHHHHHHHhcCCCCCcccc-----ccHHHHHHHHhcCCCC-------------------------------
Confidence            8999999999999999999999986542     1111111110000000                               


Q ss_pred             hhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcC
Q 026540          160 LDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQH  202 (237)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h  202 (237)
                              .......+..+.+++.+||+.+|.+||++.++++.
T Consensus       227 --------~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~  261 (267)
T cd08228         227 --------PLPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQI  261 (267)
T ss_pred             --------CCChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHH
Confidence                    00112335678999999999999999999999863

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=99.93  E-value=1.8e-25  Score=177.10  Aligned_cols=153  Identities=18%  Similarity=0.236  Sum_probs=120.2

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC---cccCcCCCcccchHHhhhcC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ---FAEEIQTRQYRAPEVILRAG   79 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~~~~PE~~~~~~   79 (237)
                      +++..+..++.|++.||.++|..++.|+||||+||+++.++.++++|||.+......   .....++..|++||++.+..
T Consensus        97 ~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~  176 (255)
T cd08219          97 FPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGAYACTYVGTPYYVPPEIWENMP  176 (255)
T ss_pred             CCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEECCCCcEEEcccCcceeecccccccccccCCccccCHHHHccCC
Confidence            568889999999999999999999999999999999999999999999998654322   22346788899999998888


Q ss_pred             CCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCc
Q 026540           80 YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWS  159 (237)
Q Consensus        80 ~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (237)
                      ++.++|+||+|++++++++|..||....      ..........  +.                                
T Consensus       177 ~~~~~Dv~slG~i~~~l~~g~~p~~~~~------~~~~~~~~~~--~~--------------------------------  216 (255)
T cd08219         177 YNNKSDIWSLGCILYELCTLKHPFQANS------WKNLILKVCQ--GS--------------------------------  216 (255)
T ss_pred             cCchhhhhhhchhheehhhccCCCCCCC------HHHHHHHHhc--CC--------------------------------
Confidence            9999999999999999999999996542      1111110000  00                                


Q ss_pred             hhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcC
Q 026540          160 LDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQH  202 (237)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h  202 (237)
                             ....+...+..+.+|+.+||+.||.+|||+++++.-
T Consensus       217 -------~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~  252 (255)
T cd08219         217 -------YKPLPSHYSYELRSLIKQMFKRNPRSRPSATTILSR  252 (255)
T ss_pred             -------CCCCCcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence                   001122345678899999999999999999999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=99.93  E-value=1.4e-25  Score=183.42  Aligned_cols=153  Identities=16%  Similarity=0.158  Sum_probs=117.1

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcCc-----ccCcCCCcccchHHhhh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQF-----AEEIQTRQYRAPEVILR   77 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~~-----~~~~~~~~~~~PE~~~~   77 (237)
                      +++..+..++.|++.||.|+|+.+++||||||+||+++.++.+||+|||++.......     .....+..|++||.+.+
T Consensus       106 ~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~apE~~~~  185 (316)
T cd05108         106 IGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGADEKEYHAEGGKVPIKWMALESILH  185 (316)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEecCCCcEEEccccccccccCCCcceeccCCccceeecChHHhcc
Confidence            4567788999999999999999999999999999999999999999999986543211     11223567999999998


Q ss_pred             cCCCchhhhhhhhhHHHHHhc-CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcccc
Q 026540           78 AGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLK  156 (237)
Q Consensus        78 ~~~~~~~diws~g~~l~~~~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (237)
                      ..++.++|+||+|+++|++++ |..||.+..      . ..+..+.....                              
T Consensus       186 ~~~~~~~Di~slGv~l~el~t~g~~p~~~~~------~-~~~~~~~~~~~------------------------------  228 (316)
T cd05108         186 RIYTHQSDVWSYGVTVWELMTFGSKPYDGIP------A-SEISSILEKGE------------------------------  228 (316)
T ss_pred             CCCCchhhhHHHHHHHHHHHcCCCCCCCCCC------H-HHHHHHHhCCC------------------------------
Confidence            889999999999999999987 888886542      1 11111110000                              


Q ss_pred             CCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcC
Q 026540          157 FWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQH  202 (237)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h  202 (237)
                                ....+..++..+.+++.+||..+|.+|||+.+++.+
T Consensus       229 ----------~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~  264 (316)
T cd05108         229 ----------RLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIE  264 (316)
T ss_pred             ----------CCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence                      001122335678899999999999999999999985

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=99.93  E-value=1.4e-25  Score=181.08  Aligned_cols=166  Identities=20%  Similarity=0.219  Sum_probs=126.8

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC----cccCcCCCcccchHHhhhc
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ----FAEEIQTRQYRAPEVILRA   78 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~----~~~~~~~~~~~~PE~~~~~   78 (237)
                      +++.++..++.|++.+|.|+|..++.|+||||+||+++.++.++|+|||++......    .....++..|++||.+...
T Consensus       102 l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  181 (290)
T cd05613         102 FKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFHEDEVERAYSFCGTIEYMAPDIVRGG  181 (290)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEECCCCCEEEeeCccceecccccccccccccCCcccCChhhccCC
Confidence            578889999999999999999999999999999999999999999999988654321    1234578899999998753


Q ss_pred             --CCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcccc
Q 026540           79 --GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLK  156 (237)
Q Consensus        79 --~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (237)
                        .++.++|+||+|++++++++|..||....      .......+....                               
T Consensus       182 ~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~------~~~~~~~~~~~~-------------------------------  224 (290)
T cd05613         182 DGGHDKAVDWWSMGVLMYELLTGASPFTVDG------EKNSQAEISRRI-------------------------------  224 (290)
T ss_pred             CCCCCccccHHHHHHHHHHHhcCCCCCCcCC------ccccHHHHHHHh-------------------------------
Confidence              46788999999999999999999986432      111111111110                               


Q ss_pred             CCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCC-----CHHHHhcCCCcCcccCCc
Q 026540          157 FWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRP-----TAQQCLQHPWLSLRNSTR  212 (237)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~-----t~~ell~hp~f~~~~~~~  212 (237)
                             .......+..++..+.+++.+||+.||.+|+     ++++++.||||...++..
T Consensus       225 -------~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~~~~  278 (290)
T cd05613         225 -------LKSEPPYPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKHPFFQKINWDD  278 (290)
T ss_pred             -------hccCCCCCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcCcccccCCHHH
Confidence                   0000112233467788999999999999997     899999999999887543

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=99.93  E-value=2.9e-25  Score=178.42  Aligned_cols=152  Identities=17%  Similarity=0.208  Sum_probs=116.7

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC-----cccCcCCCcccchHHhhh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ-----FAEEIQTRQYRAPEVILR   77 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~-----~~~~~~~~~~~~PE~~~~   77 (237)
                      +++..+..++.|++.||.|+|..+++|+||||+||+++.++.+|++|||.+......     .....++..|++||.+.+
T Consensus       106 ~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~  185 (279)
T cd05111         106 LDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILLKSDSIVQIADFGVADLLYPDDKKYFYSEHKTPIKWMALESILF  185 (279)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEEcCCccceeccCCCcccccCCCCCcccccCHHHhcc
Confidence            567889999999999999999999999999999999999999999999998654221     122345678999999988


Q ss_pred             cCCCchhhhhhhhhHHHHHhc-CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcccc
Q 026540           78 AGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLK  156 (237)
Q Consensus        78 ~~~~~~~diws~g~~l~~~~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (237)
                      ..++.++|+||+|++++++++ |..||.+..      .. ........ +.                             
T Consensus       186 ~~~~~~~Dv~slG~il~el~t~g~~p~~~~~------~~-~~~~~~~~-~~-----------------------------  228 (279)
T cd05111         186 GRYTHQSDVWSYGVTVWEMMSYGAEPYAGMR------PH-EVPDLLEK-GE-----------------------------  228 (279)
T ss_pred             CCcCchhhHHHHHHHHHHHHcCCCCCCCCCC------HH-HHHHHHHC-CC-----------------------------
Confidence            889999999999999999998 988886542      11 11111000 00                             


Q ss_pred             CCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhc
Q 026540          157 FWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ  201 (237)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  201 (237)
                                ....+..++..+.+++.+|+..||++|||+.++++
T Consensus       229 ----------~~~~~~~~~~~~~~li~~c~~~~p~~Rps~~el~~  263 (279)
T cd05111         229 ----------RLAQPQICTIDVYMVMVKCWMIDENVRPTFKELAN  263 (279)
T ss_pred             ----------cCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence                      00011123456788999999999999999999876

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=99.92  E-value=2.4e-25  Score=176.46  Aligned_cols=152  Identities=20%  Similarity=0.204  Sum_probs=119.4

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcCcccCcCCCcccchHHhhhcCCCc
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSF   82 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~   82 (237)
                      +++.++..++.|++.+|.|+|..++.|+||||+||+++.++.++++|||.+............+..|++||.+....++.
T Consensus        99 ~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~  178 (256)
T cd05039          99 ITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQDSGKLPVKWTAPEALREKKFST  178 (256)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCccchhcccceEEEeCCCCEEEcccccccccccccccCCCcccccCchhhcCCcCCc
Confidence            67888999999999999999999999999999999999999999999999876544333334466799999998888899


Q ss_pred             hhhhhhhhhHHHHHhc-CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCchh
Q 026540           83 SVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLD  161 (237)
Q Consensus        83 ~~diws~g~~l~~~~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (237)
                      ++|+||+|++++++++ |..||....      ..........   .                                  
T Consensus       179 ~~Di~slG~il~~l~~~g~~p~~~~~------~~~~~~~~~~---~----------------------------------  215 (256)
T cd05039         179 KSDVWSFGILLWEIYSFGRVPYPRIP------LKDVVPHVEK---G----------------------------------  215 (256)
T ss_pred             HHHHHHHHHHHHHHHhcCCCCCCCCC------HHHHHHHHhc---C----------------------------------
Confidence            9999999999999997 888886442      1111111000   0                                  


Q ss_pred             HHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhc
Q 026540          162 RLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ  201 (237)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  201 (237)
                          .....+...++.+.+++.+||+.+|++|||++++++
T Consensus       216 ----~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~  251 (256)
T cd05039         216 ----YRMEAPEGCPPEVYKVMKDCWELDPAKRPTFKQLRE  251 (256)
T ss_pred             ----CCCCCccCCCHHHHHHHHHHhccChhhCcCHHHHHH
Confidence                000112234678899999999999999999999885

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.92  E-value=1.8e-25  Score=179.91  Aligned_cols=166  Identities=19%  Similarity=0.163  Sum_probs=119.6

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcCc------ccCcCCCcccchHHh
Q 026540            2 TIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQF------AEEIQTRQYRAPEVI   75 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~~------~~~~~~~~~~~PE~~   75 (237)
                      .+++.++..++.|++.||.|+|..+++|+||||+||+++.++.++|+|||++.......      ....++..|++||.+
T Consensus       103 ~l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~  182 (283)
T cd05080         103 KLNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAVECL  182 (283)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCeeccccChheEEEcCCCcEEEeecccccccCCcchhhccCCCCCCCceeeCHhHh
Confidence            36788999999999999999999999999999999999999999999999986543211      122345679999999


Q ss_pred             hhcCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccc
Q 026540           76 LRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRL  155 (237)
Q Consensus        76 ~~~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (237)
                      .+..++.++|+||+|++++++++|..||......        ...+   .....                 +....    
T Consensus       183 ~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~--------~~~~---~~~~~-----------------~~~~~----  230 (283)
T cd05080         183 KENKFSYASDVWSFGVTLYELLTHCDSKQSPPKK--------FEEM---IGPKQ-----------------GQMTV----  230 (283)
T ss_pred             cccCCCcccccHHHHHHHHHHHhCCCCCCCCcch--------hhhh---hcccc-----------------cccch----
Confidence            8888899999999999999999999887543200        0000   00000                 00000    


Q ss_pred             cCCchhHHh--hhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhc
Q 026540          156 KFWSLDRLL--VDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ  201 (237)
Q Consensus       156 ~~~~~~~~~--~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  201 (237)
                        .......  ......+...+..+.+++..||+.+|++|||++++++
T Consensus       231 --~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~  276 (283)
T cd05080         231 --VRLIELLERGMRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIP  276 (283)
T ss_pred             --hhhhhhhhcCCCCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHH
Confidence              0000000  0011123445688999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=99.92  E-value=2.2e-25  Score=177.94  Aligned_cols=152  Identities=15%  Similarity=0.186  Sum_probs=117.3

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC----cccCcCCCcccchHHhhhc
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ----FAEEIQTRQYRAPEVILRA   78 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~----~~~~~~~~~~~~PE~~~~~   78 (237)
                      +++.++..++.|++.||.|+|..+++||||||+||+++.++.++++|||.+......    .....++..|+|||.+.+.
T Consensus       104 l~~~~~~~~~~~i~~al~~lH~~~iiH~dikp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  183 (266)
T cd05064         104 LVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSEAIYTTMSGKSPVLWAAPEAIQYH  183 (266)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCEeeccccHhhEEEcCCCcEEECCCcccccccccchhcccCCCCceeecCHHHHhhC
Confidence            678899999999999999999999999999999999999999999999976432211    1122335689999999888


Q ss_pred             CCCchhhhhhhhhHHHHHhc-CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccC
Q 026540           79 GYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKF  157 (237)
Q Consensus        79 ~~~~~~diws~g~~l~~~~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (237)
                      .++.++|+||+|++++++++ |..||....      .......+.+..                                
T Consensus       184 ~~~~~~Di~slG~~l~ell~~g~~p~~~~~------~~~~~~~~~~~~--------------------------------  225 (266)
T cd05064         184 HFSSASDVWSFGIVMWEVMSYGERPYWDMS------GQDVIKAVEDGF--------------------------------  225 (266)
T ss_pred             CccchhHHHHHHHHHHHHhcCCCCCcCcCC------HHHHHHHHHCCC--------------------------------
Confidence            89999999999999999764 999986542      111111110000                                


Q ss_pred             CchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhc
Q 026540          158 WSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ  201 (237)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  201 (237)
                               ....+..++..+.+++..||+.+|.+||+++++++
T Consensus       226 ---------~~~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~  260 (266)
T cd05064         226 ---------RLPAPRNCPNLLHQLMLDCWQKERGERPRFSQIHS  260 (266)
T ss_pred             ---------CCCCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHH
Confidence                     00123345677899999999999999999999875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=99.92  E-value=4.4e-25  Score=180.57  Aligned_cols=161  Identities=23%  Similarity=0.229  Sum_probs=124.5

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcCcccCcCCCcccchHHhh---hcC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVIL---RAG   79 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~PE~~~---~~~   79 (237)
                      +++.++..++.+++.++.|+|..+++|+||+|+||+++.++.++++|||++..... .....++..|++||.+.   ...
T Consensus       122 l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~  200 (317)
T cd06635         122 LQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASIASP-ANSFVGTPYWMAPEVILAMDEGQ  200 (317)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcccEEECCCCCEEEecCCCccccCC-cccccCCccccChhhhhcCCCCC
Confidence            56788899999999999999999999999999999999999999999998754332 23446788899999985   345


Q ss_pred             CCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCc
Q 026540           80 YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWS  159 (237)
Q Consensus        80 ~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (237)
                      ++.++|+||+|++++++++|..||....      .......+....  .                               
T Consensus       201 ~~~~~Dv~slGvil~el~~g~~p~~~~~------~~~~~~~~~~~~--~-------------------------------  241 (317)
T cd06635         201 YDGKVDVWSLGITCIELAERKPPLFNMN------AMSALYHIAQNE--S-------------------------------  241 (317)
T ss_pred             CCccccHHHHHHHHHHHHhCCCCCCCcc------HHHHHHHHHhcc--C-------------------------------
Confidence            7889999999999999999999986542      111111111100  0                               


Q ss_pred             hhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccC
Q 026540          160 LDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNS  210 (237)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~  210 (237)
                             ........+..+.+++.+||+.+|.+||++.++++|+|+.....
T Consensus       242 -------~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~~  285 (317)
T cd06635         242 -------PTLQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFVLRERP  285 (317)
T ss_pred             -------CCCCCccccHHHHHHHHHHccCCcccCcCHHHHHhChhhhccCc
Confidence                   00011223567889999999999999999999999999975543

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=99.92  E-value=2.7e-25  Score=178.79  Aligned_cols=153  Identities=15%  Similarity=0.218  Sum_probs=118.2

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC-----cccCcCCCcccchHHhhh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ-----FAEEIQTRQYRAPEVILR   77 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~-----~~~~~~~~~~~~PE~~~~   77 (237)
                      +++.++..++.+++.+|.|+|..++.|+||||+||+++.++.++++|||++......     .....++..|++||.+.+
T Consensus       121 ~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  200 (283)
T cd05090         121 LDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILIGEQLHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMY  200 (283)
T ss_pred             cCHHHHHHHHHHHHHHHHHHHhcCeehhccccceEEEcCCCcEEeccccccccccCCcceecccCCCccceecChHHhcc
Confidence            567788999999999999999999999999999999999999999999998653221     122234567999999988


Q ss_pred             cCCCchhhhhhhhhHHHHHhc-CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcccc
Q 026540           78 AGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLK  156 (237)
Q Consensus        78 ~~~~~~~diws~g~~l~~~~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (237)
                      ..++.++|+||+|++++++++ |..||.+..      ........ ..  .                             
T Consensus       201 ~~~~~~~Dv~slG~il~el~~~g~~p~~~~~------~~~~~~~~-~~--~-----------------------------  242 (283)
T cd05090         201 GKFSSDSDIWSFGVVLWEIFSFGLQPYYGFS------NQEVIEMV-RK--R-----------------------------  242 (283)
T ss_pred             CCCCchhhhHHHHHHHHHHHcCCCCCCCCCC------HHHHHHHH-Hc--C-----------------------------
Confidence            888999999999999999998 888886542      11111111 00  0                             


Q ss_pred             CCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcC
Q 026540          157 FWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQH  202 (237)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h  202 (237)
                               .....+..++..+.+++.+||+.||++||++.+++++
T Consensus       243 ---------~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~  279 (283)
T cd05090         243 ---------QLLPCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTR  279 (283)
T ss_pred             ---------CcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence                     0011223446788999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=99.92  E-value=2.8e-25  Score=178.54  Aligned_cols=152  Identities=16%  Similarity=0.200  Sum_probs=117.8

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcCc-----ccCcCCCcccchHHhhh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQF-----AEEIQTRQYRAPEVILR   77 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~~-----~~~~~~~~~~~PE~~~~   77 (237)
                      +++.++..++.|++.|+.|+|..+++|+||||+||+++.++.++|+|||++.......     ....++..|++||.+.+
T Consensus       119 l~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  198 (280)
T cd05092         119 LTLGQMLAIASQIASGMVYLASLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILY  198 (280)
T ss_pred             cCHHHHHHHHHHHHHHHHHHHHCCeecccccHhhEEEcCCCCEEECCCCceeEcCCCceeecCCCccccccccCHHHhcc
Confidence            5778899999999999999999999999999999999999999999999986543211     12233567999999988


Q ss_pred             cCCCchhhhhhhhhHHHHHhc-CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcccc
Q 026540           78 AGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLK  156 (237)
Q Consensus        78 ~~~~~~~diws~g~~l~~~~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (237)
                      ..++.++|+||+|++++++++ |..||....      ..+....+...                                
T Consensus       199 ~~~~~~~Di~slG~il~el~~~g~~p~~~~~------~~~~~~~~~~~--------------------------------  240 (280)
T cd05092         199 RKFTTESDIWSFGVVLWEIFTYGKQPWYQLS------NTEAIECITQG--------------------------------  240 (280)
T ss_pred             CCcCchhhHHHHHHHHHHHHcCCCCCCccCC------HHHHHHHHHcC--------------------------------
Confidence            889999999999999999998 888886542      11111111000                                


Q ss_pred             CCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhc
Q 026540          157 FWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ  201 (237)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  201 (237)
                               .....+..++..+.+++.+||+.||.+||++.++++
T Consensus       241 ---------~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~  276 (280)
T cd05092         241 ---------RELERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHS  276 (280)
T ss_pred             ---------ccCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence                     001112334677889999999999999999999874

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=99.92  E-value=6.8e-25  Score=173.58  Aligned_cols=156  Identities=22%  Similarity=0.276  Sum_probs=123.6

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC-cccCcCCCcccchHHhhhcCCC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ-FAEEIQTRQYRAPEVILRAGYS   81 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~-~~~~~~~~~~~~PE~~~~~~~~   81 (237)
                      ++++.+..++.+++.||.++|..++.|+||+|+||+++.++.++++|||++...... .....++..|++||.+.+..++
T Consensus       100 ~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~  179 (256)
T cd08530         100 IPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILLVANDLVKIGDLGISKVLKKNMAKTQIGTPHYMAPEVWKGRPYS  179 (256)
T ss_pred             CCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEecCCcEEEeeccchhhhccCCcccccCCccccCHHHHCCCCCC
Confidence            567888999999999999999999999999999999999999999999988654332 2234567889999999888888


Q ss_pred             chhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCchh
Q 026540           82 FSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLD  161 (237)
Q Consensus        82 ~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (237)
                      .++|+||+|++++++++|+.||....      .......   .. .                                  
T Consensus       180 ~~~D~~slG~~~~~l~~g~~p~~~~~------~~~~~~~---~~-~----------------------------------  215 (256)
T cd08530         180 YKSDIWSLGCLLYEMATFAPPFEARS------MQDLRYK---VQ-R----------------------------------  215 (256)
T ss_pred             chhhHHHHHHHHHHHHhCCCCCCCCC------HHHHHHH---Hh-c----------------------------------
Confidence            99999999999999999999986542      1111000   00 0                                  


Q ss_pred             HHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCc
Q 026540          162 RLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL  205 (237)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f  205 (237)
                         ......+...+.++.+++.+||+.+|.+|||+.++++||++
T Consensus       216 ---~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~p~~  256 (256)
T cd08530         216 ---GKYPPIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILASPAV  256 (256)
T ss_pred             ---CCCCCCchhhCHHHHHHHHHHcCCCcccCCCHHHHhcCCCC
Confidence               00011223456779999999999999999999999999974

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=99.92  E-value=3.6e-25  Score=179.06  Aligned_cols=159  Identities=16%  Similarity=0.170  Sum_probs=117.8

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC-----cccCcCCCcccchHHhhh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ-----FAEEIQTRQYRAPEVILR   77 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~-----~~~~~~~~~~~~PE~~~~   77 (237)
                      +++..+..++.|++.||.|+|..+++|+||||+||+++.++.++++|||.+......     .....++..|++||.+.+
T Consensus       127 ~~~~~~~~~~~~i~~al~~LH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  206 (296)
T cd05051         127 LSFSTLLYMATQIASGMRYLESLNFVHRDLATRNCLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLL  206 (296)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHcCccccccchhceeecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhc
Confidence            678889999999999999999999999999999999999999999999988643321     122344678999999988


Q ss_pred             cCCCchhhhhhhhhHHHHHhc--CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccc
Q 026540           78 AGYSFSVDMWSFACTAFELAT--GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRL  155 (237)
Q Consensus        78 ~~~~~~~diws~g~~l~~~~~--g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (237)
                      ..++.++|+||+|++++++++  +..||....      ..+.+......+...                  .        
T Consensus       207 ~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~------~~~~~~~~~~~~~~~------------------~--------  254 (296)
T cd05051         207 GKFTTKSDVWAFGVTLWEILTLCREQPYEHLT------DQQVIENAGHFFRDD------------------G--------  254 (296)
T ss_pred             CCCCccchhhhhHHHHHHHHhcCCCCCCCCcC------hHHHHHHHHhccccc------------------c--------
Confidence            889999999999999999987  556765432      222222211110000                  0        


Q ss_pred             cCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhc
Q 026540          156 KFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ  201 (237)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  201 (237)
                              .......+..++.++.+++.+||+.||.+|||+.++++
T Consensus       255 --------~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~  292 (296)
T cd05051         255 --------RQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHL  292 (296)
T ss_pred             --------ccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHH
Confidence                    00000112234578999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=99.92  E-value=3.6e-25  Score=175.72  Aligned_cols=153  Identities=18%  Similarity=0.219  Sum_probs=117.8

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcCc-c---cCcCCCcccchHHhhhc
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQF-A---EEIQTRQYRAPEVILRA   78 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~~-~---~~~~~~~~~~PE~~~~~   78 (237)
                      +++.++..++.|++.||+|+|..++.|+||||+||+++.++.++++|||.+....... .   ...++..|++||.+.+.
T Consensus        97 ~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~  176 (256)
T cd05113          97 FQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLLYS  176 (256)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCCEEECCCccceecCCCceeecCCCccChhhCCHHHHhcC
Confidence            5788899999999999999999999999999999999999999999999876433211 1   12334679999999888


Q ss_pred             CCCchhhhhhhhhHHHHHhc-CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccC
Q 026540           79 GYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKF  157 (237)
Q Consensus        79 ~~~~~~diws~g~~l~~~~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (237)
                      .++.++|+||+|++++++++ |..||....      .......+....                                
T Consensus       177 ~~~~~~Di~slG~~l~~l~~~g~~p~~~~~------~~~~~~~~~~~~--------------------------------  218 (256)
T cd05113         177 KFSSKSDVWAFGVLMWEVYSLGKMPYERFN------NSETVEKVSQGL--------------------------------  218 (256)
T ss_pred             cccchhHHHHHHHHHHHHhcCCCCCcCcCC------HHHHHHHHhcCC--------------------------------
Confidence            88999999999999999998 888886442      111111110000                                


Q ss_pred             CchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcC
Q 026540          158 WSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQH  202 (237)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h  202 (237)
                               ....+...+..+.+++.+||+.+|.+||++.+++.+
T Consensus       219 ---------~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~  254 (256)
T cd05113         219 ---------RLYRPHLASEKVYAIMYSCWHEKAEERPTFQQLLSS  254 (256)
T ss_pred             ---------CCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHh
Confidence                     000112235788999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=99.92  E-value=3.3e-25  Score=175.82  Aligned_cols=153  Identities=19%  Similarity=0.212  Sum_probs=117.7

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcCc-ccC---cCCCcccchHHhhhc
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQF-AEE---IQTRQYRAPEVILRA   78 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~~-~~~---~~~~~~~~PE~~~~~   78 (237)
                      +++..+..++.|++.+|.|+|..++.|+|+||+||+++.++.++++|||.+....... ...   .++..|++||.+.+.
T Consensus        97 ~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~  176 (256)
T cd05059          97 LGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYTSSQGTKFPVKWAPPEVFDYS  176 (256)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCcccccccHhhEEECCCCcEEECCcccceecccccccccCCCCCCccccCHHHhccC
Confidence            5678889999999999999999999999999999999999999999999886443211 111   223469999999888


Q ss_pred             CCCchhhhhhhhhHHHHHhc-CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccC
Q 026540           79 GYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKF  157 (237)
Q Consensus        79 ~~~~~~diws~g~~l~~~~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (237)
                      .++.++|+||+|++++++++ |..||....      .......+....                                
T Consensus       177 ~~~~~~Di~slG~il~~l~~~g~~p~~~~~------~~~~~~~~~~~~--------------------------------  218 (256)
T cd05059         177 RFSSKSDVWSFGVLMWEVFSEGKMPYERFS------NSEVVESVSAGY--------------------------------  218 (256)
T ss_pred             CCCchhhHHHHHHHHHHHhccCCCCCCCCC------HHHHHHHHHcCC--------------------------------
Confidence            89999999999999999998 788886542      111111110000                                


Q ss_pred             CchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcC
Q 026540          158 WSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQH  202 (237)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h  202 (237)
                               ....+...+..+.+++.+||+.+|++|||+.++++.
T Consensus       219 ---------~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~  254 (256)
T cd05059         219 ---------RLYRPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQ  254 (256)
T ss_pred             ---------cCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHH
Confidence                     011122346789999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=99.92  E-value=3.4e-25  Score=176.00  Aligned_cols=152  Identities=14%  Similarity=0.156  Sum_probs=117.5

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC------cccCcCCCcccchHHhh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ------FAEEIQTRQYRAPEVIL   76 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~------~~~~~~~~~~~~PE~~~   76 (237)
                      +++..+.+++.|++.+|.|+|..++.|+||||+||+++.++.++++|||++......      .....++..|++||.+.
T Consensus        92 ~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  171 (257)
T cd05115          92 ITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKARSAGKWPLKWYAPECIN  171 (257)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhcCeeecccchheEEEcCCCcEEeccCCccccccCCccceeccCCCCCCcccCCHHHHc
Confidence            678899999999999999999999999999999999999999999999988643321      11112246799999998


Q ss_pred             hcCCCchhhhhhhhhHHHHHhc-CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccc
Q 026540           77 RAGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRL  155 (237)
Q Consensus        77 ~~~~~~~~diws~g~~l~~~~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (237)
                      ...++.++|+||+|++++++++ |..||....      ..+....+..  +                             
T Consensus       172 ~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~------~~~~~~~~~~--~-----------------------------  214 (257)
T cd05115         172 FRKFSSRSDVWSYGITMWEAFSYGQKPYKKMK------GPEVMSFIEQ--G-----------------------------  214 (257)
T ss_pred             cCCCCchhhHHHHHHHHHHHhcCCCCCcCcCC------HHHHHHHHHC--C-----------------------------
Confidence            8788999999999999999996 889986542      1111111000  0                             


Q ss_pred             cCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhc
Q 026540          156 KFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ  201 (237)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  201 (237)
                                .....+..++.++.+++.+||..+|++||++.++.+
T Consensus       215 ----------~~~~~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~  250 (257)
T cd05115         215 ----------KRLDCPAECPPEMYALMKDCWIYKWEDRPNFAKVEE  250 (257)
T ss_pred             ----------CCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence                      001123345678899999999999999999998875

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.92  E-value=2.8e-25  Score=176.95  Aligned_cols=156  Identities=24%  Similarity=0.359  Sum_probs=123.2

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCc------CcccCcCCCcccchHHhh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK------QFAEEIQTRQYRAPEVIL   76 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~------~~~~~~~~~~~~~PE~~~   76 (237)
                      +.+..+..++.|++.+|.|+|..++.|+||||+||+++.++.++++|||++.....      ......++..|++||.+.
T Consensus       103 l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  182 (264)
T cd06653         103 LTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRIQTICMSGTGIKSVTGTPYWMSPEVIS  182 (264)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECccccccccccccccCccccccCCcccccCHhhhc
Confidence            56788999999999999999999999999999999999999999999998864321      112345778899999998


Q ss_pred             hcCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcccc
Q 026540           77 RAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLK  156 (237)
Q Consensus        77 ~~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (237)
                      +..++.++|+||+|++++++++|..||....         ....+.......                            
T Consensus       183 ~~~~~~~~Di~slG~il~~l~~g~~p~~~~~---------~~~~~~~~~~~~----------------------------  225 (264)
T cd06653         183 GEGYGRKADVWSVACTVVEMLTEKPPWAEYE---------AMAAIFKIATQP----------------------------  225 (264)
T ss_pred             CCCCCccccHHHHHHHHHHHHhCCCCCCccC---------HHHHHHHHHcCC----------------------------
Confidence            8888899999999999999999999986432         111111111100                            


Q ss_pred             CCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCc
Q 026540          157 FWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL  205 (237)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f  205 (237)
                               .....+...+..+.+++.+||+ +|.+|||+.+++.|||+
T Consensus       226 ---------~~~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~~~~~  264 (264)
T cd06653         226 ---------TKPMLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLRHPFV  264 (264)
T ss_pred             ---------CCCCCCcccCHHHHHHHHHHhc-CcccCccHHHHhcCCCC
Confidence                     0112344567889999999999 57999999999999985

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=99.92  E-value=4.1e-25  Score=176.12  Aligned_cols=155  Identities=20%  Similarity=0.223  Sum_probs=118.7

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC---cccCcCCCcccchHHhhhcC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ---FAEEIQTRQYRAPEVILRAG   79 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~~~~PE~~~~~~   79 (237)
                      +++.++..++.+++.+|.|+|..++.|+||||+||+++.++.++++|||.+......   .....++..|++||.+.+..
T Consensus       103 ~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~  182 (267)
T cd08229         103 IPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENG  182 (267)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEECcchhhhccccCCcccccccCCcCccCHHHhcCCC
Confidence            577889999999999999999999999999999999999999999999987544322   22346788999999998888


Q ss_pred             CCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCc
Q 026540           80 YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWS  159 (237)
Q Consensus        80 ~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (237)
                      ++.++|+||+|++++++++|..||.+...     +....  ...+...                            ..  
T Consensus       183 ~~~~~Dv~slG~il~~l~~g~~p~~~~~~-----~~~~~--~~~~~~~----------------------------~~--  225 (267)
T cd08229         183 YNFKSDIWSLGCLLYEMAALQSPFYGDKM-----NLYSL--CKKIEQC----------------------------DY--  225 (267)
T ss_pred             ccchhhHHHHHHHHHHHHhCCCCcccccc-----hHHHH--hhhhhcC----------------------------CC--
Confidence            89999999999999999999999865421     10000  0000000                            00  


Q ss_pred             hhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhc
Q 026540          160 LDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ  201 (237)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  201 (237)
                             ........+..+.+++.+||+.||.+|||+.++++
T Consensus       226 -------~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~  260 (267)
T cd08229         226 -------PPLPSDHYSEELRQLVNMCINPDPEKRPDITYVYD  260 (267)
T ss_pred             -------CCCCcccccHHHHHHHHHhcCCCcccCCCHHHHHH
Confidence                   00011234678999999999999999999997764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=99.92  E-value=5e-25  Score=175.10  Aligned_cols=152  Identities=20%  Similarity=0.244  Sum_probs=117.8

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcCc----ccCcCCCcccchHHhhhc
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQF----AEEIQTRQYRAPEVILRA   78 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~~----~~~~~~~~~~~PE~~~~~   78 (237)
                      +++.++..++.+++.+|.|+|..++.|+||||+||+++.++.++++|||++.......    ....++..|++||.+...
T Consensus        99 ~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  178 (260)
T cd05070          99 LKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGDGLVCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYG  178 (260)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEEeCCceEEeCCceeeeeccCcccccccCCCCCccccChHHHhcC
Confidence            5678899999999999999999999999999999999999999999999986543221    112335579999999888


Q ss_pred             CCCchhhhhhhhhHHHHHhc-CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccC
Q 026540           79 GYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKF  157 (237)
Q Consensus        79 ~~~~~~diws~g~~l~~~~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (237)
                      .++.++|+||+|++++++++ |..||.+..      ..+....+...   .                             
T Consensus       179 ~~~~~~Di~slG~~l~~l~~~g~~p~~~~~------~~~~~~~~~~~---~-----------------------------  220 (260)
T cd05070         179 RFTIKSDVWSFGILLTELVTKGRVPYPGMN------NREVLEQVERG---Y-----------------------------  220 (260)
T ss_pred             CCcchhhhHHHHHHHHHHHhcCCCCCCCCC------HHHHHHHHHcC---C-----------------------------
Confidence            88999999999999999998 888886542      22222211100   0                             


Q ss_pred             CchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhc
Q 026540          158 WSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ  201 (237)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  201 (237)
                               ....+...+..+.+|+.+||..+|.+|||+.++.+
T Consensus       221 ---------~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~  255 (260)
T cd05070         221 ---------RMPCPQDCPISLHELMLQCWKKDPEERPTFEYLQS  255 (260)
T ss_pred             ---------CCCCCCcCCHHHHHHHHHHcccCcccCcCHHHHHH
Confidence                     00112334567899999999999999999998864

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=99.92  E-value=4e-25  Score=175.68  Aligned_cols=152  Identities=18%  Similarity=0.239  Sum_probs=116.7

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcCc----ccCcCCCcccchHHhhhc
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQF----AEEIQTRQYRAPEVILRA   78 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~~----~~~~~~~~~~~PE~~~~~   78 (237)
                      +++.++..++.+++.+|.|+|..++.|+||||+||+++.++.++++|||++.......    ....++..|++||.+...
T Consensus       100 ~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  179 (261)
T cd05072         100 VLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFG  179 (261)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEecCCCcEEECCCccceecCCCceeccCCCccceecCCHHHhccC
Confidence            4567788999999999999999999999999999999999999999999986543221    122345679999999888


Q ss_pred             CCCchhhhhhhhhHHHHHhc-CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccC
Q 026540           79 GYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKF  157 (237)
Q Consensus        79 ~~~~~~diws~g~~l~~~~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (237)
                      .++.++|+||+|++++++++ |..||....      .......+...   .                             
T Consensus       180 ~~~~~~Di~slG~~l~~l~t~g~~p~~~~~------~~~~~~~~~~~---~-----------------------------  221 (261)
T cd05072         180 SFTIKSDVWSFGILLYEIVTYGKIPYPGMS------NSDVMSALQRG---Y-----------------------------  221 (261)
T ss_pred             CCChhhhhhhhHHHHHHHHccCCCCCCCCC------HHHHHHHHHcC---C-----------------------------
Confidence            88999999999999999998 888886542      21111111000   0                             


Q ss_pred             CchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhc
Q 026540          158 WSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ  201 (237)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  201 (237)
                               ........+.++.+++.+||+.+|++||+++++.+
T Consensus       222 ---------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~  256 (261)
T cd05072         222 ---------RMPRMENCPDELYDIMKTCWKEKAEERPTFDYLQS  256 (261)
T ss_pred             ---------CCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence                     00011224567889999999999999999999864

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=99.92  E-value=7.2e-25  Score=174.53  Aligned_cols=152  Identities=19%  Similarity=0.242  Sum_probs=117.4

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcCcc----cCcCCCcccchHHhhhc
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQFA----EEIQTRQYRAPEVILRA   78 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~~~----~~~~~~~~~~PE~~~~~   78 (237)
                      +++.++..++.+++.+|.|+|..+++|+||||+||+++.++.++|+|||.+........    ...++..|++||...+.
T Consensus        99 ~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~  178 (262)
T cd05071          99 LRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYG  178 (262)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCccccccCcccEEEcCCCcEEeccCCceeeccccccccccCCcccceecCHhHhccC
Confidence            56778899999999999999999999999999999999999999999998865432211    22345679999999888


Q ss_pred             CCCchhhhhhhhhHHHHHhc-CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccC
Q 026540           79 GYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKF  157 (237)
Q Consensus        79 ~~~~~~diws~g~~l~~~~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (237)
                      .++.++|+||+|++++++++ |..||....      .......+..   ..                             
T Consensus       179 ~~~~~~DvwslG~~l~ellt~g~~p~~~~~------~~~~~~~~~~---~~-----------------------------  220 (262)
T cd05071         179 RFTIKSDVWSFGILLTELTTKGRVPYPGMV------NREVLDQVER---GY-----------------------------  220 (262)
T ss_pred             CCCchhhHHHHHHHHHHHHcCCCCCCCCCC------hHHHHHHHhc---CC-----------------------------
Confidence            89999999999999999999 777886542      1111111100   00                             


Q ss_pred             CchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhc
Q 026540          158 WSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ  201 (237)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  201 (237)
                               ........+..+.+++.+|++.+|++||+++++++
T Consensus       221 ---------~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~  255 (262)
T cd05071         221 ---------RMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQA  255 (262)
T ss_pred             ---------CCCCccccCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence                     00112234677889999999999999999999875

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=99.92  E-value=4.2e-25  Score=175.27  Aligned_cols=152  Identities=18%  Similarity=0.222  Sum_probs=117.2

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcCcc------cCcCCCcccchHHhh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQFA------EEIQTRQYRAPEVIL   76 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~~~------~~~~~~~~~~PE~~~   76 (237)
                      +++..+..++.|++.+|.|+|..++.|+||||+||+++.++.++|+|||++........      ...++..|++||.+.
T Consensus        92 ~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  171 (257)
T cd05060          92 IPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYRATTAGRWPLKWYAPECIN  171 (257)
T ss_pred             CCHHHHHHHHHHHHHHHHHHhhcCeeccCcccceEEEcCCCcEEeccccccceeecCCcccccccCccccccccCHHHhc
Confidence            57888999999999999999999999999999999999999999999998865432211      111235699999998


Q ss_pred             hcCCCchhhhhhhhhHHHHHhc-CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccc
Q 026540           77 RAGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRL  155 (237)
Q Consensus        77 ~~~~~~~~diws~g~~l~~~~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (237)
                      +..++.++|+||+|++++++++ |..||....      ..+....+...                               
T Consensus       172 ~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~------~~~~~~~~~~~-------------------------------  214 (257)
T cd05060         172 YGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMK------GAEVIAMLESG-------------------------------  214 (257)
T ss_pred             CCCCCccchHHHHHHHHHHHHcCCCCCcccCC------HHHHHHHHHcC-------------------------------
Confidence            8889999999999999999997 889886542      11111111000                               


Q ss_pred             cCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhc
Q 026540          156 KFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ  201 (237)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  201 (237)
                                .....+...+..+.+++.+||..+|.+||++.++++
T Consensus       215 ----------~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~  250 (257)
T cd05060         215 ----------ERLPRPEECPQEIYSIMLSCWKYRPEDRPTFSELES  250 (257)
T ss_pred             ----------CcCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence                      000112334577889999999999999999999875

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=99.92  E-value=3.3e-25  Score=177.24  Aligned_cols=152  Identities=14%  Similarity=0.143  Sum_probs=115.7

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcCcc--cCcCCCcccchHHhhhcCC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQFA--EEIQTRQYRAPEVILRAGY   80 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~~~--~~~~~~~~~~PE~~~~~~~   80 (237)
                      +++.++..++.+++.||.|+|..+++|+||||+||+++.++.++++|||++........  ....+..|++||.+....+
T Consensus       109 l~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nili~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~y~apE~~~~~~~  188 (270)
T cd05047         109 LSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVY  188 (270)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCEeecccccceEEEcCCCeEEECCCCCccccchhhhccCCCCccccCChHHHccCCC
Confidence            56788999999999999999999999999999999999999999999998753221111  1122456999999988888


Q ss_pred             CchhhhhhhhhHHHHHhc-CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCc
Q 026540           81 SFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWS  159 (237)
Q Consensus        81 ~~~~diws~g~~l~~~~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (237)
                      +.++|+||+|++++++++ |..||....      .......+..   .                                
T Consensus       189 ~~~~Di~slG~il~el~~~g~~pf~~~~------~~~~~~~~~~---~--------------------------------  227 (270)
T cd05047         189 TTNSDVWSYGVLLWEIVSLGGTPYCGMT------CAELYEKLPQ---G--------------------------------  227 (270)
T ss_pred             CchhhHHHHHHHHHHHHcCCCCCccccC------HHHHHHHHhC---C--------------------------------
Confidence            999999999999999996 889986542      1111111000   0                                


Q ss_pred             hhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhc
Q 026540          160 LDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ  201 (237)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  201 (237)
                            .....+...+..+.+++.+|+..+|.+|||+.++++
T Consensus       228 ------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  263 (270)
T cd05047         228 ------YRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILV  263 (270)
T ss_pred             ------CCCCCCCcCCHHHHHHHHHHcccChhhCCCHHHHHH
Confidence                  000112234567889999999999999999999985

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=99.92  E-value=5e-25  Score=177.94  Aligned_cols=152  Identities=17%  Similarity=0.185  Sum_probs=117.0

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC-----cccCcCCCcccchHHhhh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ-----FAEEIQTRQYRAPEVILR   77 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~-----~~~~~~~~~~~~PE~~~~   77 (237)
                      +++..+..++.|++.+|.|+|..+++|+||||+||+++.++.++|+|||++......     .....++..|++||.+.+
T Consensus       124 l~~~~~~~i~~~i~~~l~~LH~~~ivH~dikp~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~  203 (290)
T cd05045         124 LTMGDLISFAWQISRGMQYLAEMKLVHRDLAARNVLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFD  203 (290)
T ss_pred             cCHHHHHHHHHHHHHHHHHHHHCCeehhhhhhheEEEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHcc
Confidence            567788999999999999999999999999999999999999999999998643211     112234567999999988


Q ss_pred             cCCCchhhhhhhhhHHHHHhc-CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcccc
Q 026540           78 AGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLK  156 (237)
Q Consensus        78 ~~~~~~~diws~g~~l~~~~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (237)
                      ..++.++|+||+|++++++++ |..||.+..      .....+...+..                               
T Consensus       204 ~~~~~~~Di~slG~~l~el~t~g~~p~~~~~------~~~~~~~~~~~~-------------------------------  246 (290)
T cd05045         204 HIYTTQSDVWSFGVLLWEIVTLGGNPYPGIA------PERLFNLLKTGY-------------------------------  246 (290)
T ss_pred             CCcchHhHHHHHHHHHHHHHhcCCCCCCCCC------HHHHHHHHhCCC-------------------------------
Confidence            888999999999999999998 888886542      111111100000                               


Q ss_pred             CCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhc
Q 026540          157 FWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ  201 (237)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  201 (237)
                                ....+...+..+.+|+.+||+.+|++||+++++++
T Consensus       247 ----------~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~  281 (290)
T cd05045         247 ----------RMERPENCSEEMYNLMLTCWKQEPDKRPTFADISK  281 (290)
T ss_pred             ----------CCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence                      00112334578899999999999999999999875

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=99.92  E-value=5.7e-25  Score=179.63  Aligned_cols=152  Identities=20%  Similarity=0.225  Sum_probs=116.7

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC-----cccCcCCCcccchHHhhh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ-----FAEEIQTRQYRAPEVILR   77 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~-----~~~~~~~~~~~~PE~~~~   77 (237)
                      ++..++..++.|++.||.|+|..+++|+||||+||+++.++.++|+|||++......     .....++..|++||.+.+
T Consensus       131 l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  210 (314)
T cd05099         131 LSFKDLVSCAYQVARGMEYLESRRCIHRDLAARNVLVTEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFD  210 (314)
T ss_pred             cCHHHHHHHHHHHHHHHHHHHHCCeeeccccceeEEEcCCCcEEEccccccccccccccccccccCCCCccccCHHHHcc
Confidence            567788899999999999999999999999999999999999999999998644321     111223457999999988


Q ss_pred             cCCCchhhhhhhhhHHHHHhc-CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcccc
Q 026540           78 AGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLK  156 (237)
Q Consensus        78 ~~~~~~~diws~g~~l~~~~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (237)
                      ..++.++|+||+|++++++++ |..||....      .......+...                                
T Consensus       211 ~~~~~~~DiwslG~~l~el~~~g~~p~~~~~------~~~~~~~~~~~--------------------------------  252 (314)
T cd05099         211 RVYTHQSDVWSFGILMWEIFTLGGSPYPGIP------VEELFKLLREG--------------------------------  252 (314)
T ss_pred             CCcCccchhhHHHHHHHHHHhCCCCCCCCCC------HHHHHHHHHcC--------------------------------
Confidence            889999999999999999998 778886542      11111111000                                


Q ss_pred             CCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhc
Q 026540          157 FWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ  201 (237)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  201 (237)
                               .....+..++.++.+++.+||+.+|.+|||+.++++
T Consensus       253 ---------~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~  288 (314)
T cd05099         253 ---------HRMDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVE  288 (314)
T ss_pred             ---------CCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence                     000112334567889999999999999999999886

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=99.92  E-value=5.4e-25  Score=178.91  Aligned_cols=153  Identities=19%  Similarity=0.227  Sum_probs=116.9

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC-----cccCcCCCcccchHHhhh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ-----FAEEIQTRQYRAPEVILR   77 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~-----~~~~~~~~~~~~PE~~~~   77 (237)
                      ++..++..++.|++.||.|+|..+++||||||+||+++.++.++++|||.+......     .....++..|+|||.+.+
T Consensus       134 ~~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nili~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  213 (304)
T cd05101         134 MTFKDLVSCTYQVARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFD  213 (304)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHCCeeecccccceEEEcCCCcEEECCCccceecccccccccccCCCCCceeeCchhhcc
Confidence            455678889999999999999999999999999999999999999999998654321     112234567999999988


Q ss_pred             cCCCchhhhhhhhhHHHHHhc-CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcccc
Q 026540           78 AGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLK  156 (237)
Q Consensus        78 ~~~~~~~diws~g~~l~~~~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (237)
                      ..++.++|+||+|++++++++ |..||....      .......+..   .                             
T Consensus       214 ~~~~~~~Di~slG~~l~el~~~g~~p~~~~~------~~~~~~~~~~---~-----------------------------  255 (304)
T cd05101         214 RVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP------VEELFKLLKE---G-----------------------------  255 (304)
T ss_pred             CCCCchhhHHHHHHHHHHHHcCCCCCcccCC------HHHHHHHHHc---C-----------------------------
Confidence            889999999999999999998 677775432      1111111000   0                             


Q ss_pred             CCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcC
Q 026540          157 FWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQH  202 (237)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h  202 (237)
                               .....+..++..+.+|+.+||..+|.+|||+.++++.
T Consensus       256 ---------~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~  292 (304)
T cd05101         256 ---------HRMDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVED  292 (304)
T ss_pred             ---------CcCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHH
Confidence                     0001122346788999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=99.92  E-value=5.8e-25  Score=174.17  Aligned_cols=152  Identities=16%  Similarity=0.186  Sum_probs=118.1

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcCcccCcCCCcccchHHhhhcCCCc
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSF   82 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~   82 (237)
                      +++..+..++.|++.++.|+|..++.|+|+||+||+++.++.++|+|||++............+..|++||.+.+..++.
T Consensus        97 ~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~  176 (254)
T cd05083          97 VSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILVSEDGVAKVSDFGLARVGSMGVDNSKLPVKWTAPEALKHKKFSS  176 (254)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCcEEECCCccceeccccCCCCCCCceecCHHHhccCCcCc
Confidence            56778899999999999999999999999999999999999999999999865443333334456799999998888999


Q ss_pred             hhhhhhhhhHHHHHhc-CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCchh
Q 026540           83 SVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLD  161 (237)
Q Consensus        83 ~~diws~g~~l~~~~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (237)
                      ++|+||+|++++++++ |..||....      .......+.+  +                                   
T Consensus       177 ~~Dv~slG~~l~el~~~g~~p~~~~~------~~~~~~~~~~--~-----------------------------------  213 (254)
T cd05083         177 KSDVWSYGVLLWEVFSYGRAPYPKMS------LKEVKECVEK--G-----------------------------------  213 (254)
T ss_pred             hhhHHHHHHHHHHHHhCCCCCCccCC------HHHHHHHHhC--C-----------------------------------
Confidence            9999999999999997 888886542      1111110000  0                                   


Q ss_pred             HHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhc
Q 026540          162 RLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ  201 (237)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  201 (237)
                          .....+...+..+.+++.+||+.+|.+||+++++++
T Consensus       214 ----~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~  249 (254)
T cd05083         214 ----YRMEPPEGCPADVYVLMTSCWETEPKKRPSFHKLRE  249 (254)
T ss_pred             ----CCCCCCCcCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence                000112234677889999999999999999999875

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]

Probab=99.92  E-value=3.6e-26  Score=174.07  Aligned_cols=170  Identities=20%  Similarity=0.250  Sum_probs=130.4

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhh-hcCCccCCCCCccccCCCCcEEEeecCcceecCcC--cccCcCCCcccchHHhhhc-
Q 026540            3 IVEKKLKRRAKRAVANISIRRA-SMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ--FAEEIQTRQYRAPEVILRA-   78 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~-~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~--~~~~~~~~~~~~PE~~~~~-   78 (237)
                      |+|+-..++....+.||.|+.. .+|+|||+||+|||++..|.+||||||++..+...  .+.-.|-..|+|||.+... 
T Consensus       164 ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~SiAkT~daGCrpYmAPERi~p~~  243 (361)
T KOG1006|consen  164 IPENILGHITVATVDALDYLKEELKIIHRDVKPSNILLDRHGDVKLCDFGICGQLVDSIAKTVDAGCRPYMAPERIDPSD  243 (361)
T ss_pred             CcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEecCCCEeeecccchHhHHHHHHhhhccCCccccChhccCCcc
Confidence            6778888888999999999876 56889999999999999999999999998654433  2344778899999999743 


Q ss_pred             -CCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHH-CCCCHHHHhcCCCchhhhcccCccchhcccc
Q 026540           79 -GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELI-GKMPRKIAIGGAQSKDYFDRHGDLKRIRRLK  156 (237)
Q Consensus        79 -~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (237)
                       +|..++|+||+|+.++|+.+|..|+....        ..++.+-.+. |.+|.-..                       
T Consensus       244 ~gyDiRSDvWSLGITL~EvAtG~fPyr~w~--------svfeql~~Vv~gdpp~l~~-----------------------  292 (361)
T KOG1006|consen  244 KGYDIRSDVWSLGITLYEVATGNFPYRKWD--------SVFEQLCQVVIGDPPILLF-----------------------  292 (361)
T ss_pred             CCcchhhhhhhhcceEeeeecCCCCcchHH--------HHHHHHHHHHcCCCCeecC-----------------------
Confidence             58999999999999999999999997653        2333332222 22221100                       


Q ss_pred             CCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccCCccc
Q 026540          157 FWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNSTRDE  214 (237)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~~~~~  214 (237)
                                 .......+..+.+||..||..|-..||...+++++||+.......++
T Consensus       293 -----------~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~~fyr~y~~~~~~  339 (361)
T KOG1006|consen  293 -----------DKECVHYSFSMVRFINTCLIKDRSDRPKYDDLKKFPFYRMYAVEGPD  339 (361)
T ss_pred             -----------cccccccCHHHHHHHHHHhhcccccCcchhhhhcCchhhhhhhcCCc
Confidence                       00012346788999999999999999999999999999976554443

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=99.92  E-value=8.9e-25  Score=173.73  Aligned_cols=152  Identities=18%  Similarity=0.228  Sum_probs=117.7

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcCc----ccCcCCCcccchHHhhhc
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQF----AEEIQTRQYRAPEVILRA   78 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~~----~~~~~~~~~~~PE~~~~~   78 (237)
                      +++..+..++.+++.||.|+|..+++|+||||+||+++.++.++|+|||.+.......    ....++..|++||...+.
T Consensus        99 ~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~  178 (260)
T cd05069          99 LKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILVGDNLVCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYG  178 (260)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCeEEECCCccceEccCCcccccCCCccchhhCCHHHhccC
Confidence            4667889999999999999999999999999999999999999999999986543221    112345679999999888


Q ss_pred             CCCchhhhhhhhhHHHHHhc-CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccC
Q 026540           79 GYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKF  157 (237)
Q Consensus        79 ~~~~~~diws~g~~l~~~~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (237)
                      .++.++|+||+|++++++++ |..||.+..      +......+.+.   .                             
T Consensus       179 ~~~~~~Di~slG~~l~el~t~g~~p~~~~~------~~~~~~~~~~~---~-----------------------------  220 (260)
T cd05069         179 RFTIKSDVWSFGILLTELVTKGRVPYPGMV------NREVLEQVERG---Y-----------------------------  220 (260)
T ss_pred             CcChHHHHHHHHHHHHHHHhCCCCCCCCCC------HHHHHHHHHcC---C-----------------------------
Confidence            88999999999999999998 888887542      22222111100   0                             


Q ss_pred             CchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhc
Q 026540          158 WSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ  201 (237)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  201 (237)
                               ....+...+..+.+++.+||..||.+||+++++++
T Consensus       221 ---------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~  255 (260)
T cd05069         221 ---------RMPCPQGCPESLHELMKLCWKKDPDERPTFEYIQS  255 (260)
T ss_pred             ---------CCCCCcccCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence                     00112234677899999999999999999999875

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.92  E-value=2.7e-25  Score=186.27  Aligned_cols=159  Identities=19%  Similarity=0.250  Sum_probs=128.1

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhc--CCccCCCCCccccCCC-CcEEEeecCcceecCcC-cccCcCCCcccchHHhhhc
Q 026540            3 IVEKKLKRRAKRAVANISIRRASM--GGIELPKPERCLDGID-MRCKVVDFGNACRANKQ-FAEEIQTRQYRAPEVILRA   78 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~--~~h~d~kp~Nili~~~-~~~kl~dfg~~~~~~~~-~~~~~~~~~~~~PE~~~~~   78 (237)
                      ++.+.++.-++|||.||+|||+.+  |+|||||=+||+|+.+ |.|||+|+|+|...... ....+|||.|||||+.. .
T Consensus       140 vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s~aksvIGTPEFMAPEmYE-E  218 (632)
T KOG0584|consen  140 VNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKSHAKSVIGTPEFMAPEMYE-E  218 (632)
T ss_pred             CCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCCcCceeecchhHHHHhhccccceeccCccccChHHHh-h
Confidence            466788999999999999999965  7899999999999875 99999999999776644 44569999999999986 7


Q ss_pred             CCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHH--CCCCHHHHhcCCCchhhhcccCccchhcccc
Q 026540           79 GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELI--GKMPRKIAIGGAQSKDYFDRHGDLKRIRRLK  156 (237)
Q Consensus        79 ~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (237)
                      .|+..+||||||.+++||+|+-.||.-++.         -+.+.+..  |.-|..+                        
T Consensus       219 ~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n---------~AQIYKKV~SGiKP~sl------------------------  265 (632)
T KOG0584|consen  219 NYNELVDVYAFGMCMLEMVTSEYPYSECTN---------PAQIYKKVTSGIKPAAL------------------------  265 (632)
T ss_pred             hcchhhhhhhhhHHHHHHHhccCChhhhCC---------HHHHHHHHHcCCCHHHh------------------------
Confidence            899999999999999999999999987751         12222221  2222211                        


Q ss_pred             CCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccC
Q 026540          157 FWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNS  210 (237)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~  210 (237)
                                    ..--.+++++||.+||.. .+.|+|+.|+|.||||.....
T Consensus       266 --------------~kV~dPevr~fIekCl~~-~~~R~sa~eLL~d~Ff~~d~g  304 (632)
T KOG0584|consen  266 --------------SKVKDPEVREFIEKCLAT-KSERLSAKELLKDPFFDEDGG  304 (632)
T ss_pred             --------------hccCCHHHHHHHHHHhcC-chhccCHHHHhhChhhccccc
Confidence                          111147889999999999 999999999999999997643

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=99.92  E-value=6.4e-25  Score=174.11  Aligned_cols=152  Identities=20%  Similarity=0.221  Sum_probs=116.6

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcCc----ccCcCCCcccchHHhhhc
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQF----AEEIQTRQYRAPEVILRA   78 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~~----~~~~~~~~~~~PE~~~~~   78 (237)
                      +++..+..++.+++.+|.|+|..++.|+||||+||+++.++.++++|||.+.......    ....++..|+|||.+.+.
T Consensus        97 ~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  176 (256)
T cd05114          97 LSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYTSSSGAKFPVKWSPPEVFNFS  176 (256)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCccccccCcceEEEcCCCeEEECCCCCccccCCCceeccCCCCCchhhCChhhcccC
Confidence            5678889999999999999999999999999999999999999999999875432211    112334579999999888


Q ss_pred             CCCchhhhhhhhhHHHHHhc-CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccC
Q 026540           79 GYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKF  157 (237)
Q Consensus        79 ~~~~~~diws~g~~l~~~~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (237)
                      .++.++|+||+|++++++++ |+.||....      .......+.+.  .                              
T Consensus       177 ~~~~~~Di~s~G~~l~el~~~g~~p~~~~~------~~~~~~~i~~~--~------------------------------  218 (256)
T cd05114         177 KYSSKSDVWSFGVLMWEVFTEGKMPFEKKS------NYEVVEMISRG--F------------------------------  218 (256)
T ss_pred             ccchhhhhHHHHHHHHHHHcCCCCCCCCCC------HHHHHHHHHCC--C------------------------------
Confidence            88999999999999999999 888886542      11122111100  0                              


Q ss_pred             CchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhc
Q 026540          158 WSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ  201 (237)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  201 (237)
                               ....+...+..+.+++.+|+..+|.+||+++++++
T Consensus       219 ---------~~~~~~~~~~~~~~li~~c~~~~p~~Rps~~~l~~  253 (256)
T cd05114         219 ---------RLYRPKLASMTVYEVMYSCWHEKPEGRPTFAELLR  253 (256)
T ss_pred             ---------CCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence                     00011223467889999999999999999999985

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=99.92  E-value=5.7e-25  Score=173.94  Aligned_cols=152  Identities=18%  Similarity=0.231  Sum_probs=115.6

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcCcc-----cCcCCCcccchHHhhh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQFA-----EEIQTRQYRAPEVILR   77 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~~~-----~~~~~~~~~~PE~~~~   77 (237)
                      +++.++..++.|++++|.|+|..+++|+||||+||+++.++.++++|||++........     ....+..|++||.+.+
T Consensus        91 ~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  170 (252)
T cd05084          91 LKVKELIQMVENAAAGMEYLESKHCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGGMKQIPVKWTAPEALNY  170 (252)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEEcCCCcEEECccccCcccccccccccCCCCCCceeecCchhhcC
Confidence            56888999999999999999999999999999999999999999999998764332111     1122356999999988


Q ss_pred             cCCCchhhhhhhhhHHHHHhc-CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcccc
Q 026540           78 AGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLK  156 (237)
Q Consensus        78 ~~~~~~~diws~g~~l~~~~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (237)
                      ..++.++|+||+|++++++++ |..||....      .......+...                                
T Consensus       171 ~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~------~~~~~~~~~~~--------------------------------  212 (252)
T cd05084         171 GRYSSESDVWSFGILLWEAFSLGAVPYANLS------NQQTREAIEQG--------------------------------  212 (252)
T ss_pred             CCCChHHHHHHHHHHHHHHHhCCCCCccccC------HHHHHHHHHcC--------------------------------
Confidence            889999999999999999997 778875432      11111111000                                


Q ss_pred             CCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhc
Q 026540          157 FWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ  201 (237)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  201 (237)
                               .....+...+..+.+|+.+||+.+|++|||+.++++
T Consensus       213 ---------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~  248 (252)
T cd05084         213 ---------VRLPCPELCPDAVYRLMERCWEYDPGQRPSFSTVHQ  248 (252)
T ss_pred             ---------CCCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence                     000112234667899999999999999999999874

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.92  E-value=2.8e-25  Score=186.66  Aligned_cols=165  Identities=19%  Similarity=0.210  Sum_probs=126.4

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecC---------c---------------
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRAN---------K---------------   58 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~---------~---------------   58 (237)
                      +.|..|+-|++++..|+.+.|.+|.+||||||+|||||.+|++||.|||++.-+.         .               
T Consensus       726 FeE~LARFYIAEltcAiesVHkmGFIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWTHdskYYq~gdH~RqDSmep~~e~  805 (1034)
T KOG0608|consen  726 FEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQEGDHHRQDSMEPSPEW  805 (1034)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHhccceecccCccceEEccCCceeeeeccccccceeccccccccCCCccccccCCCchhh
Confidence            4688899999999999999999999999999999999999999999999983210         0               


Q ss_pred             ---------------------CcccCcCCCcccchHHhhhcCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHH
Q 026540           59 ---------------------QFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDH  117 (237)
Q Consensus        59 ---------------------~~~~~~~~~~~~~PE~~~~~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~  117 (237)
                                           .....+||+.|.+||++...+++..+|.||.|+++|+|+.|+.||...+..+..     
T Consensus       806 ~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~em~~g~~pf~~~tp~~tq-----  880 (1034)
T KOG0608|consen  806 ADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILYEMLVGQPPFLADTPGETQ-----  880 (1034)
T ss_pred             ccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHHHHhhCCCCccCCCCCcce-----
Confidence                                 001228899999999999999999999999999999999999999887632110     


Q ss_pred             HHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCC--
Q 026540          118 LALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPT--  195 (237)
Q Consensus       118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t--  195 (237)
                      ..                          -..|....             ......+++.++.++|.+++ -++..|+.  
T Consensus       881 ~k--------------------------v~nw~~~l-------------~~~~~~~ls~e~~~li~kLc-~sad~RLGkn  920 (1034)
T KOG0608|consen  881 YK--------------------------VINWRNFL-------------HIPYQGNLSKEALDLIQKLC-CSADSRLGKN  920 (1034)
T ss_pred             ee--------------------------eeehhhcc-------------ccccccccCHHHHHHHHHHh-cChhhhhccc
Confidence            00                          00111111             01112345788889988754 36888874  


Q ss_pred             -HHHHhcCCCcCcccCCc
Q 026540          196 -AQQCLQHPWLSLRNSTR  212 (237)
Q Consensus       196 -~~ell~hp~f~~~~~~~  212 (237)
                       ++|+..||||++++...
T Consensus       921 g~d~vKaHpfFkgIDfss  938 (1034)
T KOG0608|consen  921 GADQVKAHPFFKGIDFSS  938 (1034)
T ss_pred             chhhhhcCccccccchHh
Confidence             77899999999987644

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=99.92  E-value=1.1e-24  Score=176.54  Aligned_cols=159  Identities=18%  Similarity=0.208  Sum_probs=116.1

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcCc-----ccCcCCCcccchHHhhh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQF-----AEEIQTRQYRAPEVILR   77 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~~-----~~~~~~~~~~~PE~~~~   77 (237)
                      +++.++..++.|++.||.|+|..+++|+||||+||+++.++.++++|||++.......     ....++..|++||....
T Consensus       127 ~~~~~~~~~~~~i~~al~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~  206 (296)
T cd05095         127 ISYSTLIFMATQIASGMKYLSSLNFVHRDLATRNCLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILL  206 (296)
T ss_pred             cCHHHHHHHHHHHHHHHHHHHHCCeecccCChheEEEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhc
Confidence            5567899999999999999999999999999999999999999999999986432211     11233567999999888


Q ss_pred             cCCCchhhhhhhhhHHHHHhc--CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccc
Q 026540           78 AGYSFSVDMWSFACTAFELAT--GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRL  155 (237)
Q Consensus        78 ~~~~~~~diws~g~~l~~~~~--g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (237)
                      +.++.++|+||+|++++++++  |..||....      .........+.                  +.....       
T Consensus       207 ~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~------~~~~~~~~~~~------------------~~~~~~-------  255 (296)
T cd05095         207 GKFTTASDVWAFGVTLWEILTLCKEQPYSQLS------DEQVIENTGEF------------------FRDQGR-------  255 (296)
T ss_pred             CCccchhhhhHHHHHHHHHHHhCCCCCccccC------hHHHHHHHHHH------------------Hhhccc-------
Confidence            889999999999999999997  667775432      11111111000                  000000       


Q ss_pred             cCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhc
Q 026540          156 KFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ  201 (237)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  201 (237)
                               ......+..++..+.+|+..||+.||.+||++.++++
T Consensus       256 ---------~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~  292 (296)
T cd05095         256 ---------QVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHA  292 (296)
T ss_pred             ---------cccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence                     0000112234578899999999999999999999864

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=99.92  E-value=5.9e-25  Score=178.63  Aligned_cols=153  Identities=19%  Similarity=0.240  Sum_probs=117.4

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcCc-----ccCcCCCcccchHHhhh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQF-----AEEIQTRQYRAPEVILR   77 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~~-----~~~~~~~~~~~PE~~~~   77 (237)
                      +++.++..++.+++.+|.|+|..+++|+||||+||+++.++.++++|||++.......     ....++..|++||.+.+
T Consensus       138 l~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  217 (302)
T cd05055         138 LTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLLTHGKIVKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFN  217 (302)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCeehhhhccceEEEcCCCeEEECCCcccccccCCCceeecCCCCcccccCCHhhhcc
Confidence            6788999999999999999999999999999999999999999999999986443211     11234567999999988


Q ss_pred             cCCCchhhhhhhhhHHHHHhc-CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcccc
Q 026540           78 AGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLK  156 (237)
Q Consensus        78 ~~~~~~~diws~g~~l~~~~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (237)
                      ..++.++|+||+|++++++++ |..||....     .. ........   ..                            
T Consensus       218 ~~~~~~~DiwslGvil~el~t~g~~p~~~~~-----~~-~~~~~~~~---~~----------------------------  260 (302)
T cd05055         218 CVYTFESDVWSYGILLWEIFSLGSNPYPGMP-----VD-SKFYKLIK---EG----------------------------  260 (302)
T ss_pred             CCCCcHhHHHHHHHHHHHHHhCCCCCcCCCC-----ch-HHHHHHHH---cC----------------------------
Confidence            889999999999999999998 888886542     11 11100000   00                            


Q ss_pred             CCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhc
Q 026540          157 FWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ  201 (237)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  201 (237)
                               .....+...+..+.+|+.+||+.+|++|||+.|+++
T Consensus       261 ---------~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~  296 (302)
T cd05055         261 ---------YRMAQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQ  296 (302)
T ss_pred             ---------CcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence                     000011223567899999999999999999999985

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=99.92  E-value=9.6e-25  Score=173.54  Aligned_cols=151  Identities=18%  Similarity=0.184  Sum_probs=113.0

Q ss_pred             hHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC-------cccCcCCCcccchHHhh
Q 026540            4 VEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ-------FAEEIQTRQYRAPEVIL   76 (237)
Q Consensus         4 ~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~-------~~~~~~~~~~~~PE~~~   76 (237)
                      ++..+..++.+++.||+|+|..+++||||||+||+++.++.++++|||++......       .....++..|++||.+.
T Consensus        96 ~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  175 (262)
T cd05058          96 TVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSVHNHTGAKLPVKWMALESLQ  175 (262)
T ss_pred             CHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCccccccccCCcceeecccccCcCCccccChhHhc
Confidence            45677889999999999999999999999999999999999999999988643211       11223456799999998


Q ss_pred             hcCCCchhhhhhhhhHHHHHhcCC-cccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccc
Q 026540           77 RAGYSFSVDMWSFACTAFELATGD-MLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRL  155 (237)
Q Consensus        77 ~~~~~~~~diws~g~~l~~~~~g~-~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (237)
                      ...++.++|+||+|++++++++|. .||....      .......   ....                            
T Consensus       176 ~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~------~~~~~~~---~~~~----------------------------  218 (262)
T cd05058         176 TQKFTTKSDVWSFGVLLWELMTRGAPPYPDVD------SFDITVY---LLQG----------------------------  218 (262)
T ss_pred             cCccchHHHHHHHHHHHHHHHcCCCCCCCCCC------HHHHHHH---HhcC----------------------------
Confidence            888999999999999999999954 5554321      1111110   0000                            


Q ss_pred             cCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhc
Q 026540          156 KFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ  201 (237)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  201 (237)
                                .....+...+..+.+++.+||..+|++||++.++++
T Consensus       219 ----------~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~  254 (262)
T cd05058         219 ----------RRLLQPEYCPDPLYEVMLSCWHPKPEMRPTFSELVS  254 (262)
T ss_pred             ----------CCCCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence                      000112223567889999999999999999999986

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]

Probab=99.92  E-value=7.3e-26  Score=194.76  Aligned_cols=159  Identities=19%  Similarity=0.260  Sum_probs=120.2

Q ss_pred             HHHHHHHHHhhhhhhhhhcCCccCCCCCccccCC---C--CcEEEeecCcceecC------cCcccCcCCCcccchHHhh
Q 026540            8 LKRRAKRAVANISIRRASMGGIELPKPERCLDGI---D--MRCKVVDFGNACRAN------KQFAEEIQTRQYRAPEVIL   76 (237)
Q Consensus         8 ~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~---~--~~~kl~dfg~~~~~~------~~~~~~~~~~~~~~PE~~~   76 (237)
                      ....+.|+++|+++||+.+|+||||||+||||..   +  ..++|+|||++....      .+.....||-+|+|||++.
T Consensus       608 ~~~~l~q~~~GlaHLHsl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~~~sS~~r~s~~sGt~GW~APE~L~  687 (903)
T KOG1027|consen  608 PISVLSQIASGLAHLHSLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAGGKSSFSRLSGGSGTSGWQAPEQLR  687 (903)
T ss_pred             HHHHHHHHHHHHHHHHhcccccccCCCceEEEEccCCCcceeEEecccccccccCCCcchhhcccCCCCcccccCHHHHh
Confidence            4678899999999999999999999999999976   2  578999999997654      2344567899999999999


Q ss_pred             hcCCCchhhhhhhhhHHHHHhcC-CcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccc
Q 026540           77 RAGYSFSVDMWSFACTAFELATG-DMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRL  155 (237)
Q Consensus        77 ~~~~~~~~diws~g~~l~~~~~g-~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (237)
                      ...-..++||+|+||+++++++| ..||.+..        ....++..-.                              
T Consensus       688 ~~~~~~avDiFslGCvfyYvltgG~HpFGd~~--------~R~~NIl~~~------------------------------  729 (903)
T KOG1027|consen  688 EDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSL--------ERQANILTGN------------------------------  729 (903)
T ss_pred             ccccCcccchhhcCceEEEEecCCccCCCchH--------HhhhhhhcCc------------------------------
Confidence            88878899999999999999986 67886432        1111111100                              


Q ss_pred             cCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccCCcc
Q 026540          156 KFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNSTRD  213 (237)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~~~~  213 (237)
                               .....+......++.+||.+|++.+|..||+|.++|.||+|=.+.....
T Consensus       730 ---------~~L~~L~~~~d~eA~dLI~~ml~~dP~~RPsa~~VL~HPlFW~~ekrL~  778 (903)
T KOG1027|consen  730 ---------YTLVHLEPLPDCEAKDLISRMLNPDPQLRPSATDVLNHPLFWDSEKRLS  778 (903)
T ss_pred             ---------cceeeeccCchHHHHHHHHHhcCCCcccCCCHHHHhCCCccCChHHHHH
Confidence                     0000111111127889999999999999999999999999976655443

>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]

Probab=99.92  E-value=1.9e-25  Score=179.36  Aligned_cols=203  Identities=20%  Similarity=0.244  Sum_probs=140.8

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCC-CcEEEeecCcceecC----------------cC-----
Q 026540            2 TIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGID-MRCKVVDFGNACRAN----------------KQ-----   59 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~-~~~kl~dfg~~~~~~----------------~~-----   59 (237)
                      +++-.+++.++++++.||.++|..||+|||+||+|+|.+.. +.-.|+|||++....                ..     
T Consensus       128 ~l~~~~i~~Yl~~ll~Al~~~h~~GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~~~d~~~~~~~s~~~~~~~~~~~~g~~  207 (418)
T KOG1167|consen  128 SLSLAEIRWYLRNLLKALAHLHKNGIVHRDIKPSNFLYNRRTQRGVLVDFGLAQRYDGYQQTEHSRSYSGRHATPAMGKD  207 (418)
T ss_pred             cCCHHHHHHHHHHHHHHhhhhhccCccccCCCccccccccccCCceEEechhHHHHHhhhhhhhhhhhhcccCCccccCc
Confidence            45667899999999999999999999999999999999874 677999999984110                00     


Q ss_pred             --------------------------cccCcCCCcccchHHhhhcC-CCchhhhhhhhhHHHHHhcCCcccCCCCCCCCC
Q 026540           60 --------------------------FAEEIQTRQYRAPEVILRAG-YSFSVDMWSFACTAFELATGDMLFAPKSGQGFC  112 (237)
Q Consensus        60 --------------------------~~~~~~~~~~~~PE~~~~~~-~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~  112 (237)
                                                ...+.||++|+|||++...+ .+++.|+||.|++++.++++..||....     
T Consensus       208 ~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiws~GVI~Lslls~~~PFf~a~-----  282 (418)
T KOG1167|consen  208 VHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIWSAGVILLSLLSRRYPFFKAK-----  282 (418)
T ss_pred             ccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccceeeccceeehhhccccccccCc-----
Confidence                                      01237899999999999765 6889999999999999999999998665     


Q ss_pred             ChHHHHHHHHHHHCCCCHHHHhcCCCchhhhc-----ccC-ccchhcccc---CCchhHHhhhhcCCCHHhHHHHHHHHH
Q 026540          113 EDEDHLALMMELIGKMPRKIAIGGAQSKDYFD-----RHG-DLKRIRRLK---FWSLDRLLVDKYRFSETDAREFAEFLV  183 (237)
Q Consensus       113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~-~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~li~  183 (237)
                      ++.+.+..+..++|.-.-.-........-.+.     ... ....++...   .......-.......+..+..+.+|+.
T Consensus       283 dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~q~n~~~~~~~d~~~~~~~dlLd  362 (418)
T KOG1167|consen  283 DDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKSRQPNTEREIGSDVFPALLLDLLD  362 (418)
T ss_pred             cccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhcccccccceeeccccccccHHHHHHHH
Confidence            67788888888887633322211111100110     000 000000000   000000000112233445668899999


Q ss_pred             hccccCCCCCCCHHHHhcCCCcCccc
Q 026540          184 PLLDFTPEKRPTAQQCLQHPWLSLRN  209 (237)
Q Consensus       184 ~~L~~dP~~R~t~~ell~hp~f~~~~  209 (237)
                      +||..||.+|+|++++|+||||...+
T Consensus       363 k~le~np~kRitAEeALkHpFF~~~~  388 (418)
T KOG1167|consen  363 KCLELNPQKRITAEDALKHPFFDEAD  388 (418)
T ss_pred             HHccCChhhcccHHHHhcCcCCcchh
Confidence            99999999999999999999999553

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=99.92  E-value=9.1e-25  Score=173.59  Aligned_cols=152  Identities=18%  Similarity=0.268  Sum_probs=118.4

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcCc---ccCcCCCcccchHHhhhcC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQF---AEEIQTRQYRAPEVILRAG   79 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~~---~~~~~~~~~~~PE~~~~~~   79 (237)
                      +++.++.+++.|++.|+.|+|..++.|+||||+||+++.++.++++|||.+.......   ....++..|++||.+....
T Consensus       101 ~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~  180 (261)
T cd05148         101 LPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILVGEDLVCKVADFGLARLIKEDVYLSSDKKIPYKWTAPEAASHGT  180 (261)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCeeccccCcceEEEcCCceEEEccccchhhcCCccccccCCCCceEecCHHHHccCC
Confidence            5677889999999999999999999999999999999999999999999886543221   1223456799999998888


Q ss_pred             CCchhhhhhhhhHHHHHhc-CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCC
Q 026540           80 YSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFW  158 (237)
Q Consensus        80 ~~~~~diws~g~~l~~~~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (237)
                      ++.++|+||+|++++++++ |..||....      .......+...                                  
T Consensus       181 ~~~~~DiwslG~~l~~l~~~g~~p~~~~~------~~~~~~~~~~~----------------------------------  220 (261)
T cd05148         181 FSTKSDVWSFGILLYEMFTYGQVPYPGMN------NHEVYDQITAG----------------------------------  220 (261)
T ss_pred             CCchhhHHHHHHHHHHHHcCCCCCCCcCC------HHHHHHHHHhC----------------------------------
Confidence            8999999999999999998 788886542      11111111100                                  


Q ss_pred             chhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhc
Q 026540          159 SLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ  201 (237)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  201 (237)
                             .....+..++..+.+++.+||+.||.+|||++++++
T Consensus       221 -------~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~  256 (261)
T cd05148         221 -------YRMPCPAKCPQEIYKIMLECWAAEPEDRPSFKALRE  256 (261)
T ss_pred             -------CcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence                   001123345678899999999999999999999875

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]

Probab=99.92  E-value=4.1e-26  Score=188.19  Aligned_cols=160  Identities=24%  Similarity=0.264  Sum_probs=128.0

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCC---CcEEEeecCcceecCcC--cccCcCCCcccchHHhhh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGID---MRCKVVDFGNACRANKQ--FAEEIQTRQYRAPEVILR   77 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~---~~~kl~dfg~~~~~~~~--~~~~~~~~~~~~PE~~~~   77 (237)
                      |+|--.+-.+.|||.||.|+|..+|.|+||||+|||+...   -.+||+|||.++..++.  ....+||+.|+|||++..
T Consensus       661 L~er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEksFRrsVVGTPAYLaPEVLrn  740 (888)
T KOG4236|consen  661 LPERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKSFRRSVVGTPAYLAPEVLRN  740 (888)
T ss_pred             chHHHHHHHHHHHHHHHHHhhhcceeeccCCchheeeccCCCCCceeeccccceeecchhhhhhhhcCCccccCHHHHhh
Confidence            4555666778999999999999999999999999999764   37899999999887654  345699999999999999


Q ss_pred             cCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccC
Q 026540           78 AGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKF  157 (237)
Q Consensus        78 ~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (237)
                      .+|+..-|+||+|+++|..++|..||....        +..+.++...=-.|                            
T Consensus       741 kGyNrSLDMWSVGVIiYVsLSGTFPFNEdE--------dIndQIQNAaFMyP----------------------------  784 (888)
T KOG4236|consen  741 KGYNRSLDMWSVGVIIYVSLSGTFPFNEDE--------DINDQIQNAAFMYP----------------------------  784 (888)
T ss_pred             ccccccccceeeeEEEEEEecccccCCCcc--------chhHHhhccccccC----------------------------
Confidence            999999999999999999999999996432        22222111000000                            


Q ss_pred             CchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcc
Q 026540          158 WSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLR  208 (237)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~  208 (237)
                                ..-..+++.+++|||..+|+..=++|.|+++.|.|||+.+.
T Consensus       785 ----------p~PW~eis~~AidlIn~LLqVkm~kRysvdk~lsh~Wlq~y  825 (888)
T KOG4236|consen  785 ----------PNPWSEISPEAIDLINNLLQVKMRKRYSVDKSLSHPWLQDY  825 (888)
T ss_pred             ----------CCchhhcCHHHHHHHHHHHHHHHHHhcchHhhccchhhhcc
Confidence                      00124567889999999999999999999999999999865

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=99.92  E-value=1.6e-24  Score=171.85  Aligned_cols=153  Identities=18%  Similarity=0.171  Sum_probs=118.4

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC------cccCcCCCcccchHHhh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ------FAEEIQTRQYRAPEVIL   76 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~------~~~~~~~~~~~~PE~~~   76 (237)
                      +++..+..++.|++.||.|+|..++.|+||||+||+++.++.++++|||.+......      .....++..|++||.+.
T Consensus        94 ~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~  173 (257)
T cd05040          94 FLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVMEEHLKVPFAWCAPESLR  173 (257)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHhCCccccccCcccEEEecCCEEEeccccccccccccccceecccCCCCCceecCHHHhc
Confidence            567788999999999999999999999999999999999999999999988654321      11234567899999998


Q ss_pred             hcCCCchhhhhhhhhHHHHHhc-CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccc
Q 026540           77 RAGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRL  155 (237)
Q Consensus        77 ~~~~~~~~diws~g~~l~~~~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (237)
                      ...++.++|+||+|++++++++ |..||...+      ..+....+....                              
T Consensus       174 ~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~------~~~~~~~~~~~~------------------------------  217 (257)
T cd05040         174 TRTFSHASDVWMFGVTLWEMFTYGEEPWAGLS------GSQILKKIDKEG------------------------------  217 (257)
T ss_pred             ccCcCchhhhHHHHHHHHHHHhCCCCCCCCCC------HHHHHHHHHhcC------------------------------
Confidence            8889999999999999999998 999886442      111111111000                              


Q ss_pred             cCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhc
Q 026540          156 KFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ  201 (237)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  201 (237)
                                .....+...+..+.+++.+||+.+|++|||+.++++
T Consensus       218 ----------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~  253 (257)
T cd05040         218 ----------ERLERPEACPQDIYNVMLQCWAHNPADRPTFAALRE  253 (257)
T ss_pred             ----------CcCCCCccCCHHHHHHHHHHCCCCcccCCCHHHHHH
Confidence                      000112234577889999999999999999999875

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=99.92  E-value=1.3e-24  Score=176.01  Aligned_cols=159  Identities=17%  Similarity=0.167  Sum_probs=116.3

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC-----cccCcCCCcccchHHhhh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ-----FAEEIQTRQYRAPEVILR   77 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~-----~~~~~~~~~~~~PE~~~~   77 (237)
                      +.+.++..++.+++.||.|+|..++.|+||||+||+++.++.+||+|||++......     .....++..|++||.+..
T Consensus       126 ~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  205 (295)
T cd05097         126 VSIANLLYMAVQIASGMKYLASLNFVHRDLATRNCLVGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILL  205 (295)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHhcCeeccccChhhEEEcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhcc
Confidence            456788899999999999999999999999999999999999999999988543211     112234568999999988


Q ss_pred             cCCCchhhhhhhhhHHHHHhc--CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccc
Q 026540           78 AGYSFSVDMWSFACTAFELAT--GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRL  155 (237)
Q Consensus        78 ~~~~~~~diws~g~~l~~~~~--g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (237)
                      ..++.++|+||+|++++++++  +..||...+      ...............                  .        
T Consensus       206 ~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~------~~~~~~~~~~~~~~~------------------~--------  253 (295)
T cd05097         206 GKFTTASDVWAFGVTLWEMFTLCKEQPYSLLS------DEQVIENTGEFFRNQ------------------G--------  253 (295)
T ss_pred             CCcCchhhHHHHHHHHHHHHHcCCCCCCcccC------hHHHHHHHHHhhhhc------------------c--------
Confidence            889999999999999999987  556765442      112221111111000                  0        


Q ss_pred             cCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhc
Q 026540          156 KFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ  201 (237)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  201 (237)
                              .......+...+..+.+|+.+|+..||.+|||++++++
T Consensus       254 --------~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~  291 (295)
T cd05097         254 --------RQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHH  291 (295)
T ss_pred             --------ccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence                    00000112234678999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=99.92  E-value=7.9e-25  Score=178.23  Aligned_cols=153  Identities=19%  Similarity=0.214  Sum_probs=116.9

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC-----cccCcCCCcccchHHhhh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ-----FAEEIQTRQYRAPEVILR   77 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~-----~~~~~~~~~~~~PE~~~~   77 (237)
                      ++..++.+++.|++.||.|+|..++.|+||||+||+++.++.++|+|||++......     .....++..|++||.+.+
T Consensus       137 l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  216 (307)
T cd05098         137 LSFKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFD  216 (307)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCcccccccHHheEEcCCCcEEECCCcccccccccchhhccccCCCccceeChHHhcc
Confidence            567788999999999999999999999999999999999999999999988643321     111223467999999988


Q ss_pred             cCCCchhhhhhhhhHHHHHhc-CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcccc
Q 026540           78 AGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLK  156 (237)
Q Consensus        78 ~~~~~~~diws~g~~l~~~~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (237)
                      ..++.++|+||+|++++++++ |..||....      .......+ ..   .                            
T Consensus       217 ~~~~~~~DvwslG~~l~el~~~g~~p~~~~~------~~~~~~~~-~~---~----------------------------  258 (307)
T cd05098         217 RIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP------VEELFKLL-KE---G----------------------------  258 (307)
T ss_pred             CCCCcHHHHHHHHHHHHHHHcCCCCCCCcCC------HHHHHHHH-Hc---C----------------------------
Confidence            889999999999999999998 778875432      11111110 00   0                            


Q ss_pred             CCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcC
Q 026540          157 FWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQH  202 (237)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h  202 (237)
                               .....+...+.++.+++.+||..+|.+|||+.+++++
T Consensus       259 ---------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~  295 (307)
T cd05098         259 ---------HRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED  295 (307)
T ss_pred             ---------CCCCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHH
Confidence                     0011223346788899999999999999999999864

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=99.92  E-value=8e-25  Score=184.03  Aligned_cols=154  Identities=16%  Similarity=0.189  Sum_probs=118.0

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC-----cccCcCCCcccchHHhh
Q 026540            2 TIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ-----FAEEIQTRQYRAPEVIL   76 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~-----~~~~~~~~~~~~PE~~~   76 (237)
                      ++++.++..++.|++.||.|+|..+++|+||||+||+++.++.++|+|||++......     .....++..|++||.+.
T Consensus       233 ~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dikp~Nill~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~  312 (400)
T cd05105         233 GLTTLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLLAQGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIF  312 (400)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHhEEEeCCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhc
Confidence            3678889999999999999999999999999999999999999999999998654321     11234567899999998


Q ss_pred             hcCCCchhhhhhhhhHHHHHhc-CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccc
Q 026540           77 RAGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRL  155 (237)
Q Consensus        77 ~~~~~~~~diws~g~~l~~~~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (237)
                      +..++.++|+||+|++++++++ |..||....     ........+   ...                            
T Consensus       313 ~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~-----~~~~~~~~~---~~~----------------------------  356 (400)
T cd05105         313 DNLYTTLSDVWSYGILLWEIFSLGGTPYPGMI-----VDSTFYNKI---KSG----------------------------  356 (400)
T ss_pred             CCCCCchhhHHHHHHHHHHHHHCCCCCCcccc-----hhHHHHHHH---hcC----------------------------
Confidence            8889999999999999999996 888886542     010000000   000                            


Q ss_pred             cCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhc
Q 026540          156 KFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ  201 (237)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  201 (237)
                                .....+..++..+.+++.+||+.||++|||+.++.+
T Consensus       357 ----------~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~  392 (400)
T cd05105         357 ----------YRMAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSD  392 (400)
T ss_pred             ----------CCCCCCccCCHHHHHHHHHHCccCHhHCcCHHHHHH
Confidence                      001112345678899999999999999999998875

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=99.92  E-value=1.3e-24  Score=175.31  Aligned_cols=152  Identities=16%  Similarity=0.239  Sum_probs=116.5

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC-----cccCcCCCcccchHHhhh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ-----FAEEIQTRQYRAPEVILR   77 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~-----~~~~~~~~~~~~PE~~~~   77 (237)
                      +++.++..++.|++.+|.|+|..+++|+||||+||+++.++.++++|||.+......     ......+..|++||.+.+
T Consensus       127 l~~~~~~~~~~~i~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  206 (288)
T cd05050         127 LSCTEQLCIAKQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFY  206 (288)
T ss_pred             cCHHHHHHHHHHHHHHHHHHHhCCeecccccHhheEecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhc
Confidence            567788999999999999999999999999999999999999999999988643221     112233567999999988


Q ss_pred             cCCCchhhhhhhhhHHHHHhc-CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcccc
Q 026540           78 AGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLK  156 (237)
Q Consensus        78 ~~~~~~~diws~g~~l~~~~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (237)
                      ..++.++|+||+|++++++++ |..||.+..      .......+..  +                              
T Consensus       207 ~~~~~~~Dv~slG~il~el~~~~~~p~~~~~------~~~~~~~~~~--~------------------------------  248 (288)
T cd05050         207 NRYTTESDVWAYGVVLWEIFSYGMQPYYGMA------HEEVIYYVRD--G------------------------------  248 (288)
T ss_pred             CCCCchhHHHHHHHHHHHHHhCCCCCCCCCC------HHHHHHHHhc--C------------------------------
Confidence            889999999999999999997 777876542      1111110000  0                              


Q ss_pred             CCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhc
Q 026540          157 FWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ  201 (237)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  201 (237)
                               .....+..++..+.+|+.+||+.+|.+|||++|+++
T Consensus       249 ---------~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~  284 (288)
T cd05050         249 ---------NVLSCPDNCPLELYNLMRLCWSKLPSDRPSFASINR  284 (288)
T ss_pred             ---------CCCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence                     000112234678899999999999999999999874

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=99.92  E-value=8.9e-25  Score=175.48  Aligned_cols=152  Identities=18%  Similarity=0.201  Sum_probs=117.3

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC-----cccCcCCCcccchHHhhh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ-----FAEEIQTRQYRAPEVILR   77 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~-----~~~~~~~~~~~~PE~~~~   77 (237)
                      +++..+..++.+++.||.|+|..+++|+||||+||+++.++.++++|||++..+...     .....++..|++||.+.+
T Consensus       114 l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~p~nil~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~  193 (280)
T cd05043         114 LSTQQLVHMAIQIACGMSYLHKRGVIHKDIAARNCVIDEELQVKITDNALSRDLFPMDYHCLGDNENRPVKWMALESLVN  193 (280)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCEeecccCHhhEEEcCCCcEEECCCCCcccccCCceEEeCCCCCcchhccCHHHHhc
Confidence            568889999999999999999999999999999999999999999999998644221     112234567999999988


Q ss_pred             cCCCchhhhhhhhhHHHHHhc-CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcccc
Q 026540           78 AGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLK  156 (237)
Q Consensus        78 ~~~~~~~diws~g~~l~~~~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (237)
                      ..++.++|+||+|++++++++ |..||....      ..+....   .....                            
T Consensus       194 ~~~~~~~Di~slG~~l~el~~~g~~p~~~~~------~~~~~~~---~~~~~----------------------------  236 (280)
T cd05043         194 KEYSSASDVWSFGVLLWELMTLGQTPYVEID------PFEMAAY---LKDGY----------------------------  236 (280)
T ss_pred             CCCCchhhHHHhHHHHHHHhcCCCCCcCcCC------HHHHHHH---HHcCC----------------------------
Confidence            889999999999999999998 999986542      1111100   00000                            


Q ss_pred             CCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhc
Q 026540          157 FWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ  201 (237)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  201 (237)
                                ....+..++..+.+++.+|+..||++|||+.++++
T Consensus       237 ----------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~  271 (280)
T cd05043         237 ----------RLAQPINCPDELFAVMACCWALDPEERPSFSQLVQ  271 (280)
T ss_pred             ----------CCCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence                      00112224567899999999999999999999884

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=99.92  E-value=1.1e-24  Score=173.11  Aligned_cols=152  Identities=18%  Similarity=0.245  Sum_probs=117.9

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC-c---ccCcCCCcccchHHhhhc
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ-F---AEEIQTRQYRAPEVILRA   78 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~-~---~~~~~~~~~~~PE~~~~~   78 (237)
                      +++.++..++.+++.+|.|+|..++.|+||||+||+++.++.++++|||++...... .   ....++..|++||.+...
T Consensus        99 ~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~  178 (260)
T cd05067          99 LTINKLIDMAAQIAEGMAFIERKNYIHRDLRAANILVSETLCCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYG  178 (260)
T ss_pred             CCHHHHHHHHHHHHHHHHHHhcCCeecccccHHhEEEcCCCCEEEccCcceeecCCCCcccccCCcccccccCHHHhccC
Confidence            567788999999999999999999999999999999999999999999988654411 1   122345679999999888


Q ss_pred             CCCchhhhhhhhhHHHHHhc-CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccC
Q 026540           79 GYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKF  157 (237)
Q Consensus        79 ~~~~~~diws~g~~l~~~~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (237)
                      .++.++|+||+|++++++++ |..||.+..      .......+....                                
T Consensus       179 ~~~~~~Di~slG~~l~el~~~g~~p~~~~~------~~~~~~~~~~~~--------------------------------  220 (260)
T cd05067         179 TFTIKSDVWSFGILLTEIVTYGRIPYPGMT------NPEVIQNLERGY--------------------------------  220 (260)
T ss_pred             CcCcccchHHHHHHHHHHHhCCCCCCCCCC------hHHHHHHHHcCC--------------------------------
Confidence            88999999999999999998 999997543      111111110000                                


Q ss_pred             CchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhc
Q 026540          158 WSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ  201 (237)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  201 (237)
                               ....+...+.++.+++.+||+.+|++|||++++++
T Consensus       221 ---------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~  255 (260)
T cd05067         221 ---------RMPRPDNCPEELYELMRLCWKEKPEERPTFEYLRS  255 (260)
T ss_pred             ---------CCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence                     00112234567999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=99.92  E-value=1.2e-24  Score=173.01  Aligned_cols=152  Identities=20%  Similarity=0.257  Sum_probs=117.1

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcCc-ccCc---CCCcccchHHhhhc
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQF-AEEI---QTRQYRAPEVILRA   78 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~~-~~~~---~~~~~~~PE~~~~~   78 (237)
                      +++.++..++.+++.++.++|..+++|+||||+||+++.++.++|+|||++....... ....   .+..|++||.+.+.
T Consensus       100 ~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  179 (261)
T cd05068         100 LKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLVGENNICKVADFGLARVIKEDIYEAREGAKFPIKWTAPEAALYN  179 (261)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCeeeccCCcceEEEcCCCCEEECCcceEEEccCCcccccCCCcCceeccCccccccC
Confidence            5678889999999999999999999999999999999999999999999986554221 1112   23479999999888


Q ss_pred             CCCchhhhhhhhhHHHHHhc-CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccC
Q 026540           79 GYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKF  157 (237)
Q Consensus        79 ~~~~~~diws~g~~l~~~~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (237)
                      .++.++|+||+|++++++++ |..||.+..      .......+.+..                                
T Consensus       180 ~~~~~~Di~slG~~l~el~t~g~~p~~~~~------~~~~~~~~~~~~--------------------------------  221 (261)
T cd05068         180 RFSIKSDVWSFGILLTEIVTYGRMPYPGMT------NAEVLQQVDQGY--------------------------------  221 (261)
T ss_pred             CCCchhhHHHHHHHHHHHHhcCCCCCCCCC------HHHHHHHHHcCC--------------------------------
Confidence            88999999999999999998 888886542      111111110000                                


Q ss_pred             CchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhc
Q 026540          158 WSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ  201 (237)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  201 (237)
                               ....+...+..+.+++.+|++.+|.+||+++++++
T Consensus       222 ---------~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~  256 (261)
T cd05068         222 ---------RMPCPPGCPKELYDIMLDCWKEDPDDRPTFETLQW  256 (261)
T ss_pred             ---------CCCCCCcCCHHHHHHHHHHhhcCcccCCCHHHHHH
Confidence                     00112234577899999999999999999999874

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.92  E-value=7.3e-25  Score=174.07  Aligned_cols=150  Identities=17%  Similarity=0.196  Sum_probs=113.2

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCc--------EEEeecCcceecCcCcccCcCCCcccchHH
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMR--------CKVVDFGNACRANKQFAEEIQTRQYRAPEV   74 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~--------~kl~dfg~~~~~~~~~~~~~~~~~~~~PE~   74 (237)
                      +++..+..++.|++.||.|+|..+++||||||+||+++.++.        ++++|||.+..... .....++..|++||.
T Consensus        97 ~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~~~~-~~~~~~~~~y~aPE~  175 (258)
T cd05078          97 INISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITVLP-KEILLERIPWVPPEC  175 (258)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEecccccccCCCceEEecccccccccCC-chhccccCCccCchh
Confidence            567888999999999999999999999999999999987654        69999998754432 223456788999999


Q ss_pred             hhhc-CCCchhhhhhhhhHHHHHhcCC-cccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchh
Q 026540           75 ILRA-GYSFSVDMWSFACTAFELATGD-MLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRI  152 (237)
Q Consensus        75 ~~~~-~~~~~~diws~g~~l~~~~~g~-~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (237)
                      +.+. .++.++|+||+|++++++++|. .||....      ......    ..                           
T Consensus       176 ~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~------~~~~~~----~~---------------------------  218 (258)
T cd05078         176 IENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALD------SQKKLQ----FY---------------------------  218 (258)
T ss_pred             ccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhcc------HHHHHH----HH---------------------------
Confidence            9875 4788999999999999999985 5554321      110000    00                           


Q ss_pred             ccccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcC
Q 026540          153 RRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQH  202 (237)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h  202 (237)
                                  ......+...+.++.+++.+||+.||.+|||++++++.
T Consensus       219 ------------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~  256 (258)
T cd05078         219 ------------EDRHQLPAPKWTELANLINQCMDYEPDFRPSFRAIIRD  256 (258)
T ss_pred             ------------HccccCCCCCcHHHHHHHHHHhccChhhCCCHHHHHHh
Confidence                        00111222334678899999999999999999999863

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.91  E-value=1.3e-24  Score=172.36  Aligned_cols=149  Identities=19%  Similarity=0.231  Sum_probs=113.5

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCC-------cEEEeecCcceecCcCcccCcCCCcccchHHh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDM-------RCKVVDFGNACRANKQFAEEIQTRQYRAPEVI   75 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~-------~~kl~dfg~~~~~~~~~~~~~~~~~~~~PE~~   75 (237)
                      +++..+..++.|++.||.|+|..++.|+||||+||+++.++       .++++|||++..... .....++..|++||.+
T Consensus        98 ~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a~~~~~-~~~~~~~~~y~aPE~~  176 (259)
T cd05037          98 VSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPITVLS-REERVERIPWIAPECI  176 (259)
T ss_pred             CCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEecCccccCCceeEEeCCCCccccccc-ccccccCCCccChhhh
Confidence            56788899999999999999999999999999999999877       799999998865433 2234556789999999


Q ss_pred             hhc--CCCchhhhhhhhhHHHHHhcC-CcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchh
Q 026540           76 LRA--GYSFSVDMWSFACTAFELATG-DMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRI  152 (237)
Q Consensus        76 ~~~--~~~~~~diws~g~~l~~~~~g-~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (237)
                      .+.  .++.++|+||+|++++++++| ..||......      . ..                     .++.        
T Consensus       177 ~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~------~-~~---------------------~~~~--------  220 (259)
T cd05037         177 RNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSS------E-KE---------------------RFYQ--------  220 (259)
T ss_pred             cCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCch------h-HH---------------------HHHh--------
Confidence            876  688999999999999999984 5666543200      0 00                     0000        


Q ss_pred             ccccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhc
Q 026540          153 RRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ  201 (237)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  201 (237)
                                   .....+......+.+++.+||..+|.+|||+.++++
T Consensus       221 -------------~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~  256 (259)
T cd05037         221 -------------DQHRLPMPDCAELANLINQCWTYDPTKRPSFRAILR  256 (259)
T ss_pred             -------------cCCCCCCCCchHHHHHHHHHhccChhhCCCHHHHHH
Confidence                         000001111267889999999999999999999985

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=99.91  E-value=4.7e-25  Score=196.15  Aligned_cols=157  Identities=24%  Similarity=0.281  Sum_probs=116.8

Q ss_pred             HHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecC---------------------cCcccC
Q 026540            5 EKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRAN---------------------KQFAEE   63 (237)
Q Consensus         5 ~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~---------------------~~~~~~   63 (237)
                      ...+-+++++|++|+.|+|..+++||||||.||+++.+..|||+|||++....                     ...+..
T Consensus       696 ~d~~wrLFreIlEGLaYIH~~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~  775 (1351)
T KOG1035|consen  696 RDEAWRLFREILEGLAYIHDQGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQ  775 (1351)
T ss_pred             hHHHHHHHHHHHHHHHHHHhCceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccc
Confidence            45678899999999999999999999999999999999999999999985410                     134556


Q ss_pred             cCCCcccchHHhhhcC---CCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCch
Q 026540           64 IQTRQYRAPEVILRAG---YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSK  140 (237)
Q Consensus        64 ~~~~~~~~PE~~~~~~---~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  140 (237)
                      +||..|+|||++.+..   |+.++|+||+|++++||+..   |...       .+.......-.-|.+|..         
T Consensus       776 VGTalYvAPEll~~~~~~~Yn~KiDmYSLGIVlFEM~yP---F~Ts-------MERa~iL~~LR~g~iP~~---------  836 (1351)
T KOG1035|consen  776 VGTALYVAPELLSDTSSNKYNSKIDMYSLGIVLFEMLYP---FGTS-------MERASILTNLRKGSIPEP---------  836 (1351)
T ss_pred             cceeeeecHHHhcccccccccchhhhHHHHHHHHHHhcc---CCch-------HHHHHHHHhcccCCCCCC---------
Confidence            8999999999998754   99999999999999999974   4321       111111100001111110         


Q ss_pred             hhhcccCccchhccccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCc
Q 026540          141 DYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSL  207 (237)
Q Consensus       141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~  207 (237)
                                                 ..+.....+.-..+|..||+.||.+||||.|+|++.||-.
T Consensus       837 ---------------------------~~f~~~~~~~e~slI~~Ll~hdP~kRPtA~eLL~s~llpp  876 (1351)
T KOG1035|consen  837 ---------------------------ADFFDPEHPEEASLIRWLLSHDPSKRPTATELLNSELLPP  876 (1351)
T ss_pred             ---------------------------cccccccchHHHHHHHHHhcCCCccCCCHHHHhhccCCCc
Confidence                                       0011112233458999999999999999999999999974

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=99.91  E-value=1.4e-24  Score=173.06  Aligned_cols=153  Identities=16%  Similarity=0.226  Sum_probs=117.3

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCc---Ccc--cCcCCCcccchHHhhh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK---QFA--EEIQTRQYRAPEVILR   77 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~---~~~--~~~~~~~~~~PE~~~~   77 (237)
                      +++.++.+++.|++.++.|+|..++.|+||||+||+++.++.++++|||++.....   ...  ...++..|++||.+.+
T Consensus       103 ~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~  182 (266)
T cd05033         103 FTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRRLEDSEATYTTKGGKIPIRWTAPEAIAY  182 (266)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCCEEECccchhhcccccccceeccCCCCCccccChhhhcc
Confidence            56788999999999999999999999999999999999999999999999865431   111  1223567999999988


Q ss_pred             cCCCchhhhhhhhhHHHHHhc-CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcccc
Q 026540           78 AGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLK  156 (237)
Q Consensus        78 ~~~~~~~diws~g~~l~~~~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (237)
                      ..++.++|+||+|++++++++ |..||....      .......+....                               
T Consensus       183 ~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~------~~~~~~~~~~~~-------------------------------  225 (266)
T cd05033         183 RKFTSASDVWSFGIVMWEVMSYGERPYWDMS------NQDVIKAVEDGY-------------------------------  225 (266)
T ss_pred             CCCccccchHHHHHHHHHHHccCCCCCCCCC------HHHHHHHHHcCC-------------------------------
Confidence            889999999999999999987 888885442      111111110000                               


Q ss_pred             CCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcC
Q 026540          157 FWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQH  202 (237)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h  202 (237)
                                ....+...+..+.+++.+|++.+|++||++++++++
T Consensus       226 ----------~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~  261 (266)
T cd05033         226 ----------RLPPPMDCPSALYQLMLDCWQKDRNERPTFSQIVST  261 (266)
T ss_pred             ----------CCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence                      000122345778999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=99.91  E-value=1.5e-24  Score=178.60  Aligned_cols=153  Identities=20%  Similarity=0.234  Sum_probs=116.8

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC-----cccCcCCCcccchHHhhh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ-----FAEEIQTRQYRAPEVILR   77 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~-----~~~~~~~~~~~~PE~~~~   77 (237)
                      +...++..++.|++.||.|+|..+++||||||+||+++.++.++|+|||++......     .....++..|++||++.+
T Consensus       131 l~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  210 (334)
T cd05100         131 LTFKDLVSCAYQVARGMEYLASQKCIHRDLAARNVLVTEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFD  210 (334)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcCCCcEEECCcccceecccccccccccCCCcCceEcCHHHhcc
Confidence            445677889999999999999999999999999999999999999999998654321     111223457999999988


Q ss_pred             cCCCchhhhhhhhhHHHHHhc-CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcccc
Q 026540           78 AGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLK  156 (237)
Q Consensus        78 ~~~~~~~diws~g~~l~~~~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (237)
                      ..++.++|+||+|++++++++ |..||....      .......+..   .                             
T Consensus       211 ~~~~~~~Di~slG~il~el~~~g~~p~~~~~------~~~~~~~~~~---~-----------------------------  252 (334)
T cd05100         211 RVYTHQSDVWSFGVLLWEIFTLGGSPYPGIP------VEELFKLLKE---G-----------------------------  252 (334)
T ss_pred             CCcCchhhhHHHHHHHHHHHhcCCCCCCCCC------HHHHHHHHHc---C-----------------------------
Confidence            889999999999999999998 778886542      1111111100   0                             


Q ss_pred             CCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcC
Q 026540          157 FWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQH  202 (237)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h  202 (237)
                               .....+...+.++.+++.+||+.+|.+|||+.+++++
T Consensus       253 ---------~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~  289 (334)
T cd05100         253 ---------HRMDKPANCTHELYMIMRECWHAVPSQRPTFKQLVED  289 (334)
T ss_pred             ---------CCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHH
Confidence                     0001122345678899999999999999999999986

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=99.91  E-value=2.4e-24  Score=170.53  Aligned_cols=152  Identities=19%  Similarity=0.244  Sum_probs=117.8

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcCcc----cCcCCCcccchHHhhhc
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQFA----EEIQTRQYRAPEVILRA   78 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~~~----~~~~~~~~~~PE~~~~~   78 (237)
                      +++.++..++.|++.+|+++|..++.|+||||+||+++.++.++++|||.+........    ...++..|++||.+.+.
T Consensus       100 ~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~  179 (258)
T smart00219      100 LSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYYKKKGGKLPIRWMAPESLKDG  179 (258)
T ss_pred             CCHHHHHHHHHHHHHHHHHHhcCCeeecccccceEEEccCCeEEEcccCCceecccccccccccCCCcccccChHHhccC
Confidence            67889999999999999999999999999999999999999999999999865442211    12356789999999777


Q ss_pred             CCCchhhhhhhhhHHHHHhc-CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccC
Q 026540           79 GYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKF  157 (237)
Q Consensus        79 ~~~~~~diws~g~~l~~~~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (237)
                      .++.++|+||+|++++++++ |..||....      .......+....                                
T Consensus       180 ~~~~~~Di~slG~i~~~l~~~g~~p~~~~~------~~~~~~~~~~~~--------------------------------  221 (258)
T smart00219      180 KFTSKSDVWSFGVLLWEIFTLGESPYPGMS------NEEVLEYLKKGY--------------------------------  221 (258)
T ss_pred             CCCcchhHHHHHHHHHHHHhCCCCCCCCCC------HHHHHHHHhcCC--------------------------------
Confidence            88999999999999999998 777776432      111111110000                                


Q ss_pred             CchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhc
Q 026540          158 WSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ  201 (237)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  201 (237)
                               ....+...+..+.+++.+||+.+|++|||+.|+++
T Consensus       222 ---------~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~  256 (258)
T smart00219      222 ---------RLPKPENCPPEIYKLMLQCWAEDPEDRPTFSELVE  256 (258)
T ss_pred             ---------CCCCCCcCCHHHHHHHHHHCcCChhhCcCHHHHHh
Confidence                     00112224678899999999999999999999985

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=99.91  E-value=1.8e-24  Score=178.87  Aligned_cols=154  Identities=19%  Similarity=0.262  Sum_probs=116.1

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC-----cccCcCCCcccchHHhhh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ-----FAEEIQTRQYRAPEVILR   77 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~-----~~~~~~~~~~~~PE~~~~   77 (237)
                      ++..++.+++.|+++||.|+|+.+++||||||+||+++.++.++++|||++......     .....++..|++||.+.+
T Consensus       176 ~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  255 (343)
T cd05103         176 LTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFD  255 (343)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCCCCCcceECcHHhcC
Confidence            567788999999999999999999999999999999999999999999988653221     111233567999999988


Q ss_pred             cCCCchhhhhhhhhHHHHHhc-CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcccc
Q 026540           78 AGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLK  156 (237)
Q Consensus        78 ~~~~~~~diws~g~~l~~~~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (237)
                      ..++.++|+||+|++++++++ |..||....     ........+..  +                              
T Consensus       256 ~~~~~~~Di~slG~~l~el~~~g~~p~~~~~-----~~~~~~~~~~~--~------------------------------  298 (343)
T cd05103         256 RVYTIQSDVWSFGVLLWEIFSLGASPYPGVK-----IDEEFCRRLKE--G------------------------------  298 (343)
T ss_pred             CCCCchhhHHHHHHHHHHHHHCCCCCCCCcc-----ccHHHHHHHhc--c------------------------------
Confidence            889999999999999999996 888886432     11110000000  0                              


Q ss_pred             CCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcC
Q 026540          157 FWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQH  202 (237)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h  202 (237)
                               .....+...+..+.+++..||+.+|.+|||+.++++|
T Consensus       299 ---------~~~~~~~~~~~~~~~~~~~cl~~~p~~Rps~~eil~~  335 (343)
T cd05103         299 ---------TRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH  335 (343)
T ss_pred             ---------CCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence                     0001112234578899999999999999999999975

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=99.91  E-value=2e-24  Score=175.53  Aligned_cols=153  Identities=15%  Similarity=0.123  Sum_probs=116.6

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC-----cccCcCCCcccchHHhhh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ-----FAEEIQTRQYRAPEVILR   77 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~-----~~~~~~~~~~~~PE~~~~   77 (237)
                      ++++.+..++.|++.||.|+|..+++|+||||+||+++.++.+||+|||++......     .....++..|++||.+.+
T Consensus       106 ~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~  185 (303)
T cd05110         106 IGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHY  185 (303)
T ss_pred             CCHHHHHHHHHHHHHHHHHHhhcCeeccccccceeeecCCCceEEccccccccccCcccccccCCCccccccCCHHHhcc
Confidence            567889999999999999999999999999999999999999999999998654321     112233568999999988


Q ss_pred             cCCCchhhhhhhhhHHHHHhc-CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcccc
Q 026540           78 AGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLK  156 (237)
Q Consensus        78 ~~~~~~~diws~g~~l~~~~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (237)
                      ..++.++|+||+|++++++++ |..||.+..      . ...........                              
T Consensus       186 ~~~~~~~DiwslG~~l~el~t~g~~p~~~~~------~-~~~~~~~~~~~------------------------------  228 (303)
T cd05110         186 RKFTHQSDVWSYGVTIWELMTFGGKPYDGIP------T-REIPDLLEKGE------------------------------  228 (303)
T ss_pred             CCCChHHHHHHHHHHHHHHHhCCCCCCCCCC------H-HHHHHHHHCCC------------------------------
Confidence            889999999999999999987 888886542      1 11111110000                              


Q ss_pred             CCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcC
Q 026540          157 FWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQH  202 (237)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h  202 (237)
                                ....+..++..+.+++.+|+..+|++||+++++++.
T Consensus       229 ----------~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~  264 (303)
T cd05110         229 ----------RLPQPPICTIDVYMVMVKCWMIDADSRPKFKELAAE  264 (303)
T ss_pred             ----------CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence                      000112234577899999999999999999998874

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=99.91  E-value=2.3e-24  Score=171.22  Aligned_cols=152  Identities=18%  Similarity=0.237  Sum_probs=117.7

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcCc----ccCcCCCcccchHHhhhc
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQF----AEEIQTRQYRAPEVILRA   78 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~~----~~~~~~~~~~~PE~~~~~   78 (237)
                      +++.++..++.+++.++.|+|..++.|+||||+||+++.++.++++|||.+.......    .....+..|++||.+.+.
T Consensus       100 ~~~~~~~~~~~~i~~al~~lh~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~  179 (261)
T cd05034         100 LRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNILVGENLVCKIADFGLARLIEDDEYTAREGAKFPIKWTAPEAANYG  179 (261)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCcccCCcchheEEEcCCCCEEECccccceeccchhhhhhhccCCCccccCHHHhccC
Confidence            5677889999999999999999999999999999999999999999999886543211    111234579999999888


Q ss_pred             CCCchhhhhhhhhHHHHHhc-CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccC
Q 026540           79 GYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKF  157 (237)
Q Consensus        79 ~~~~~~diws~g~~l~~~~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (237)
                      .++.++|+||+|++++++++ |+.||.+.+      ....+..+....                                
T Consensus       180 ~~~~~~Di~slG~il~~l~t~g~~p~~~~~------~~~~~~~~~~~~--------------------------------  221 (261)
T cd05034         180 RFTIKSDVWSFGILLTEIVTYGRVPYPGMT------NREVLEQVERGY--------------------------------  221 (261)
T ss_pred             CcCchhHHHHHHHHHHHHHhCCCCCCCCCC------HHHHHHHHHcCC--------------------------------
Confidence            88999999999999999998 889986542      222222221100                                


Q ss_pred             CchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhc
Q 026540          158 WSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ  201 (237)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  201 (237)
                               ....+...+..+.+++.+||+.+|.+||+++++++
T Consensus       222 ---------~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~  256 (261)
T cd05034         222 ---------RMPRPPNCPEELYDLMLQCWDKDPEERPTFEYLQS  256 (261)
T ss_pred             ---------CCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence                     00112233567889999999999999999999874

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.91  E-value=1.8e-24  Score=173.48  Aligned_cols=150  Identities=19%  Similarity=0.240  Sum_probs=112.4

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCC-------cEEEeecCcceecCcCcccCcCCCcccchHHh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDM-------RCKVVDFGNACRANKQFAEEIQTRQYRAPEVI   75 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~-------~~kl~dfg~~~~~~~~~~~~~~~~~~~~PE~~   75 (237)
                      +++..+.+++.|++.||.|+|..+++||||||+||+++..+       .++++|||.+...... ....++..|++||.+
T Consensus       114 ~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill~~~~~~~~~~~~~kl~d~g~~~~~~~~-~~~~~~~~~~aPe~~  192 (274)
T cd05076         114 VPVAWKITVAQQLASALSYLEDKNLVHGNVCAKNILLARLGLAEGTSPFIKLSDPGVSFTALSR-EERVERIPWIAPECV  192 (274)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcccEEEeccCcccCccceeeecCCccccccccc-cccccCCcccCchhh
Confidence            56788899999999999999999999999999999997543       4799999987543222 234567889999988


Q ss_pred             hh-cCCCchhhhhhhhhHHHHHh-cCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhc
Q 026540           76 LR-AGYSFSVDMWSFACTAFELA-TGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIR  153 (237)
Q Consensus        76 ~~-~~~~~~~diws~g~~l~~~~-~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (237)
                      .+ ..++.++|+||+|+++++++ +|..||....      ......    ..                            
T Consensus       193 ~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~------~~~~~~----~~----------------------------  234 (274)
T cd05076         193 PGGNSLSTAADKWSFGTTLLEICFDGEVPLKERT------PSEKER----FY----------------------------  234 (274)
T ss_pred             cCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccC------hHHHHH----HH----------------------------
Confidence            76 45789999999999999984 6888886542      100000    00                            


Q ss_pred             cccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcC
Q 026540          154 RLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQH  202 (237)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h  202 (237)
                                 ......+......+.+++.+||+.+|++|||+++++++
T Consensus       235 -----------~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~il~~  272 (274)
T cd05076         235 -----------EKKHRLPEPSCKELATLISQCLTYEPTQRPSFRTILRD  272 (274)
T ss_pred             -----------HhccCCCCCCChHHHHHHHHHcccChhhCcCHHHHHHh
Confidence                       00001112224568899999999999999999999864

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=99.91  E-value=2.3e-24  Score=170.74  Aligned_cols=153  Identities=18%  Similarity=0.251  Sum_probs=117.2

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC-c---ccCcCCCcccchHHhhhc
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ-F---AEEIQTRQYRAPEVILRA   78 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~-~---~~~~~~~~~~~PE~~~~~   78 (237)
                      +++..+..++.+++.++.++|..++.|+|+||+||+++.++.++++|||.+...... .   ....++..|++||.+.+.
T Consensus        97 ~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~  176 (256)
T cd05112          97 FSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYTSSTGTKFPVKWSSPEVFSFS  176 (256)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCccccccccceEEEcCCCeEEECCCcceeecccCcccccCCCccchhhcCHhHhccC
Confidence            467788999999999999999999999999999999999999999999988644322 1   122335679999999888


Q ss_pred             CCCchhhhhhhhhHHHHHhc-CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccC
Q 026540           79 GYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKF  157 (237)
Q Consensus        79 ~~~~~~diws~g~~l~~~~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (237)
                      .++.++|+||+|++++++++ |..||....      .......+.+..                                
T Consensus       177 ~~~~~~Dv~slG~~l~el~~~g~~p~~~~~------~~~~~~~~~~~~--------------------------------  218 (256)
T cd05112         177 KYSSKSDVWSFGVLMWEVFSEGKTPYENRS------NSEVVETINAGF--------------------------------  218 (256)
T ss_pred             CcChHHHHHHHHHHHHHHHcCCCCCCCcCC------HHHHHHHHhCCC--------------------------------
Confidence            89999999999999999998 888886542      111111110000                                


Q ss_pred             CchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcC
Q 026540          158 WSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQH  202 (237)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h  202 (237)
                               ....+...+..+.+|+.+||+.+|.+|||++++++.
T Consensus       219 ---------~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~  254 (256)
T cd05112         219 ---------RLYKPRLASQSVYELMQHCWKERPEDRPSFSLLLHQ  254 (256)
T ss_pred             ---------CCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHh
Confidence                     000122235778999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=99.91  E-value=2.9e-24  Score=169.60  Aligned_cols=152  Identities=18%  Similarity=0.251  Sum_probs=117.1

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcCcc----cCcCCCcccchHHhhhc
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQFA----EEIQTRQYRAPEVILRA   78 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~~~----~~~~~~~~~~PE~~~~~   78 (237)
                      +++..+..++.+++.+|.|+|..+++|+|+||+||+++.++.++++|||++........    ...++..|++||.+...
T Consensus        90 ~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  169 (250)
T cd05085          90 LKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGLKQIPIKWTAPEALNYG  169 (250)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCeeecccChheEEEcCCCeEEECCCccceeccccccccCCCCCCcccccCHHHhccC
Confidence            56788899999999999999999999999999999999999999999998864332211    12234579999999888


Q ss_pred             CCCchhhhhhhhhHHHHHhc-CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccC
Q 026540           79 GYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKF  157 (237)
Q Consensus        79 ~~~~~~diws~g~~l~~~~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (237)
                      .++.++|+||+|++++++++ |..||.+..      .......   +....                             
T Consensus       170 ~~~~~~Di~slG~ll~~~~~~g~~p~~~~~------~~~~~~~---~~~~~-----------------------------  211 (250)
T cd05085         170 RYSSESDVWSYGILLWETFSLGVCPYPGMT------NQQAREQ---VEKGY-----------------------------  211 (250)
T ss_pred             CCCchhHHHHHHHHHHHHhcCCCCCCCCCC------HHHHHHH---HHcCC-----------------------------
Confidence            88999999999999999998 888986542      1111111   10000                             


Q ss_pred             CchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhc
Q 026540          158 WSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ  201 (237)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  201 (237)
                               ....+..++..+.+++.+|+..+|++||++.++++
T Consensus       212 ---------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~  246 (250)
T cd05085         212 ---------RMSCPQKCPDDVYKVMQRCWDYKPENRPKFSELQK  246 (250)
T ss_pred             ---------CCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence                     00112234678899999999999999999999975

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=99.91  E-value=3.7e-24  Score=170.82  Aligned_cols=152  Identities=18%  Similarity=0.231  Sum_probs=116.6

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCC-----cEEEeecCcceecCcC-----cccCcCCCcccch
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDM-----RCKVVDFGNACRANKQ-----FAEEIQTRQYRAP   72 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~-----~~kl~dfg~~~~~~~~-----~~~~~~~~~~~~P   72 (237)
                      +++.++..++.+++.+|.|+|..+++|+|+||+||+++.+.     .++++|||++......     .....++..|++|
T Consensus       103 ~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aP  182 (269)
T cd05044         103 LTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLARDIYKSDYYRKEGEGLLPVRWMAP  182 (269)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHhCCcccCCCChheEEEecCCCCCCcceEECCcccccccccccccccCcccCCCccccCH
Confidence            56788899999999999999999999999999999999877     8999999988543211     1122445789999


Q ss_pred             HHhhhcCCCchhhhhhhhhHHHHHhc-CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccch
Q 026540           73 EVILRAGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKR  151 (237)
Q Consensus        73 E~~~~~~~~~~~diws~g~~l~~~~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (237)
                      |.+.+..++.++|+||+|++++++++ |..||....      .......+..                            
T Consensus       183 E~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~------~~~~~~~~~~----------------------------  228 (269)
T cd05044         183 ESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALN------NQEVLQHVTA----------------------------  228 (269)
T ss_pred             HHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccC------HHHHHHHHhc----------------------------
Confidence            99998889999999999999999997 888886442      1111111100                            


Q ss_pred             hccccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhc
Q 026540          152 IRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ  201 (237)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  201 (237)
                                   ......+...+..+.+++.+||..+|.+||+++++++
T Consensus       229 -------------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~  265 (269)
T cd05044         229 -------------GGRLQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQE  265 (269)
T ss_pred             -------------CCccCCcccchHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence                         0001122334678899999999999999999999875

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.91  E-value=1.2e-24  Score=175.24  Aligned_cols=166  Identities=19%  Similarity=0.224  Sum_probs=117.2

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC------cccCcCCCcccchHHhh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ------FAEEIQTRQYRAPEVIL   76 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~------~~~~~~~~~~~~PE~~~   76 (237)
                      +++..+..++.+++.+|+|+|..+++|+||||+||+++.++.++|+|||++......      .....++..|++||.+.
T Consensus       106 ~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~apE~~~  185 (284)
T cd05079         106 INLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDLDSPVFWYAPECLI  185 (284)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCeeecccchheEEEcCCCCEEECCCccccccccCccceeecCCCCCCccccCHHHhc
Confidence            567788999999999999999999999999999999999999999999988644321      11234566799999998


Q ss_pred             hcCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcccc
Q 026540           77 RAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLK  156 (237)
Q Consensus        77 ~~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (237)
                      +..++.++|+||+|+++++++++..++....           .......+.......      ...              
T Consensus       186 ~~~~~~~~Di~slG~il~ellt~~~~~~~~~-----------~~~~~~~~~~~~~~~------~~~--------------  234 (284)
T cd05079         186 QSKFYIASDVWSFGVTLYELLTYCDSESSPM-----------TLFLKMIGPTHGQMT------VTR--------------  234 (284)
T ss_pred             cCCCCccccchhhhhhhhhhhcCCCCCcccc-----------chhhhhccccccccc------HHH--------------
Confidence            8888999999999999999999765543221           000011110000000      000              


Q ss_pred             CCchhHHhh--hhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcC
Q 026540          157 FWSLDRLLV--DKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQH  202 (237)
Q Consensus       157 ~~~~~~~~~--~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h  202 (237)
                         ......  .....+..++..+.+|+.+||+.+|.+|||++++++.
T Consensus       235 ---~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~  279 (284)
T cd05079         235 ---LVRVLEEGKRLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEG  279 (284)
T ss_pred             ---HHHHHHcCccCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHH
Confidence               000000  0011233456789999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=99.91  E-value=3.7e-24  Score=170.78  Aligned_cols=152  Identities=14%  Similarity=0.177  Sum_probs=116.0

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcCcc------cCcCCCcccchHHhh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQFA------EEIQTRQYRAPEVIL   76 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~~~------~~~~~~~~~~PE~~~   76 (237)
                      +++.++..++.+++.|+.|+|..++.|+|+||+||+++.++.++++|||++........      ....+..|++||.+.
T Consensus       104 ~~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~  183 (268)
T cd05063         104 FSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNILVNSNLECKVSDFGLSRVLEDDPEGTYTTSGGKIPIRWTAPEAIA  183 (268)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEEcCCCcEEECCCccceecccccccceeccCCCcCceecCHHHhh
Confidence            56778899999999999999999999999999999999999999999998864432111      111234699999998


Q ss_pred             hcCCCchhhhhhhhhHHHHHhc-CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccc
Q 026540           77 RAGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRL  155 (237)
Q Consensus        77 ~~~~~~~~diws~g~~l~~~~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (237)
                      ...++.++|+||+|++++++++ |..||....      .......+... .                             
T Consensus       184 ~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~------~~~~~~~i~~~-~-----------------------------  227 (268)
T cd05063         184 YRKFTSASDVWSFGIVMWEVMSFGERPYWDMS------NHEVMKAINDG-F-----------------------------  227 (268)
T ss_pred             cCCcChHhHHHHHHHHHHHHHhCCCCCCCcCC------HHHHHHHHhcC-C-----------------------------
Confidence            8888999999999999999987 999986542      21211111100 0                             


Q ss_pred             cCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhc
Q 026540          156 KFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ  201 (237)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  201 (237)
                                 ....+...+..+.+++.+|++.+|.+||++.++++
T Consensus       228 -----------~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~  262 (268)
T cd05063         228 -----------RLPAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVN  262 (268)
T ss_pred             -----------CCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence                       00011223567889999999999999999999975

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.91  E-value=1.6e-24  Score=170.37  Aligned_cols=175  Identities=18%  Similarity=0.216  Sum_probs=140.6

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCccee---cCcCcccCcCCCcccchHHhhhc
Q 026540            2 TIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACR---ANKQFAEEIQTRQYRAPEVILRA   78 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~---~~~~~~~~~~~~~~~~PE~~~~~   78 (237)
                      .|.|..|+-+.+.|.-||+|+|+.+|++||+|..|+|++..|++|+.|+|.+..   .+...+..+||+.|.|||.+.+.
T Consensus       347 klpeeharfys~ei~lal~flh~rgiiyrdlkldnvlldaeghikltdygmcke~l~~gd~tstfcgtpnyiapeilrge  426 (593)
T KOG0695|consen  347 KLPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGLGPGDTTSTFCGTPNYIAPEILRGE  426 (593)
T ss_pred             cCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEEccCCceeecccchhhcCCCCCcccccccCCCcccchhhhccc
Confidence            478999999999999999999999999999999999999999999999998754   33455678999999999999999


Q ss_pred             CCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCC
Q 026540           79 GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFW  158 (237)
Q Consensus        79 ~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (237)
                      .|+..+|.|++|+++++|..|+.||.--..+.  ++......++                                    
T Consensus       427 eygfsvdwwalgvlmfemmagrspfdivgm~n--~d~ntedylf------------------------------------  468 (593)
T KOG0695|consen  427 EYGFSVDWWALGVLMFEMMAGRSPFDIVGMDN--PDMNTEDYLF------------------------------------  468 (593)
T ss_pred             ccCceehHHHHHHHHHHHHcCCCCcceecCCC--cccchhHHHH------------------------------------
Confidence            99999999999999999999999997443111  1111111111                                    


Q ss_pred             chhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCC------HHHHhcCCCcCcccCCccccc
Q 026540          159 SLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPT------AQQCLQHPWLSLRNSTRDETK  216 (237)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t------~~ell~hp~f~~~~~~~~~~~  216 (237)
                        .-++....+.|...+-.+-..++..|+.||.+|+.      +.++..|+||...++...+++
T Consensus       469 --qvilekqiriprslsvkas~vlkgflnkdp~erlgc~~~~g~~dik~h~ffr~idwd~leqk  530 (593)
T KOG0695|consen  469 --QVILEKQIRIPRSLSVKASHVLKGFLNKDPKERLGCRPQTGFSDIKSHAFFRSIDWDLLEQK  530 (593)
T ss_pred             --HHHhhhcccccceeehhhHHHHHHhhcCCcHHhcCCCcccchhhhhcchhhhhCCHHHHhhc
Confidence              11222334556666777778899999999999974      789999999998888776654

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=99.91  E-value=2.7e-24  Score=169.89  Aligned_cols=152  Identities=19%  Similarity=0.261  Sum_probs=115.7

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcCcc-----cCcCCCcccchHHhhh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQFA-----EEIQTRQYRAPEVILR   77 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~~~-----~~~~~~~~~~PE~~~~   77 (237)
                      +++..+..++.+++.++.|+|..++.|+||||+||+++.++.++++|||.+........     ....+..|++||.+.+
T Consensus        90 ~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~  169 (251)
T cd05041          90 LTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLKQIPIKWTAPEALNY  169 (251)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcceEEEcCCCcEEEeeccccccccCCcceeccccCcceeccCChHhhcc
Confidence            45677889999999999999999999999999999999999999999998864431111     1122456999999988


Q ss_pred             cCCCchhhhhhhhhHHHHHhc-CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcccc
Q 026540           78 AGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLK  156 (237)
Q Consensus        78 ~~~~~~~diws~g~~l~~~~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (237)
                      ..++.++|+||+|++++++++ |..||....      .......+ ...                               
T Consensus       170 ~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~------~~~~~~~~-~~~-------------------------------  211 (251)
T cd05041         170 GRYTSESDVWSYGILLWETFSLGDTPYPGMS------NQQTRERI-ESG-------------------------------  211 (251)
T ss_pred             CCCCcchhHHHHHHHHHHHHhccCCCCccCC------HHHHHHHH-hcC-------------------------------
Confidence            889999999999999999998 778886542      11111110 000                               


Q ss_pred             CCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhc
Q 026540          157 FWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ  201 (237)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  201 (237)
                               .....+...+..+.+++.+||+.+|.+|||+.|+++
T Consensus       212 ---------~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~ell~  247 (251)
T cd05041         212 ---------YRMPAPQLCPEEIYRLMLQCWAYDPENRPSFSEIYN  247 (251)
T ss_pred             ---------CCCCCCccCCHHHHHHHHHHhccChhhCcCHHHHHH
Confidence                     001122334678999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=99.91  E-value=2.6e-24  Score=171.37  Aligned_cols=154  Identities=22%  Similarity=0.276  Sum_probs=118.5

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC---cccCcCCCcccchHHhhhcC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ---FAEEIQTRQYRAPEVILRAG   79 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~~~~PE~~~~~~   79 (237)
                      +++.++..++.+++.+|.++|..++.|+||||+||+++.++.++++|||++......   .....++..|++||.+.+..
T Consensus       103 ~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~  182 (267)
T cd08224         103 IPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENG  182 (267)
T ss_pred             cCHHHHHHHHHHHHHHHHHHHhCCEecCCcChhhEEECCCCcEEEeccceeeeccCCCcccceecCCccccCHHHhccCC
Confidence            578889999999999999999999999999999999999999999999987543321   22345678899999998888


Q ss_pred             CCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCc
Q 026540           80 YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWS  159 (237)
Q Consensus        80 ~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (237)
                      ++.++|+||+|++++++++|..||.....     +   ..........                   +            
T Consensus       183 ~~~~~Di~slG~il~~l~~g~~p~~~~~~-----~---~~~~~~~~~~-------------------~------------  223 (267)
T cd08224         183 YNFKSDIWSLGCLLYEMAALQSPFYGDKM-----N---LYSLCKKIEK-------------------C------------  223 (267)
T ss_pred             CCchhcHHHHHHHHHHHHHCCCCcccCCc-----c---HHHHHhhhhc-------------------C------------
Confidence            99999999999999999999999864420     0   0000000000                   0            


Q ss_pred             hhHHhhhhcCCC-HHhHHHHHHHHHhccccCCCCCCCHHHHhc
Q 026540          160 LDRLLVDKYRFS-ETDAREFAEFLVPLLDFTPEKRPTAQQCLQ  201 (237)
Q Consensus       160 ~~~~~~~~~~~~-~~~~~~~~~li~~~L~~dP~~R~t~~ell~  201 (237)
                            .....+ ...+..+.++|.+||..+|.+|||+.++++
T Consensus       224 ------~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~  260 (267)
T cd08224         224 ------DYPPLPADHYSEELRDLVSRCINPDPEKRPDISYVLQ  260 (267)
T ss_pred             ------CCCCCChhhcCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence                  000011 134567889999999999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=99.91  E-value=1.1e-24  Score=173.39  Aligned_cols=152  Identities=20%  Similarity=0.284  Sum_probs=114.7

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC-----cccCcCCCcccchHHhhh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ-----FAEEIQTRQYRAPEVILR   77 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~-----~~~~~~~~~~~~PE~~~~   77 (237)
                      +++.+...++.|++.||+|+|+.+++|+||+++||+++.++.+||+|||++......     .........|++||.+.+
T Consensus       100 ~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~  179 (259)
T PF07714_consen  100 LSEQQRLSIAIQIAEALSYLHSNNIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSKYKNDSSQQLPLRYLAPEVLKD  179 (259)
T ss_dssp             SBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEETTTEEEEESTTTGEETTTSSSEEESTTSESGGGGS-HHHHHH
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            567889999999999999999999999999999999999999999999998765211     122345678999999999


Q ss_pred             cCCCchhhhhhhhhHHHHHhc-CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcccc
Q 026540           78 AGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLK  156 (237)
Q Consensus        78 ~~~~~~~diws~g~~l~~~~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (237)
                      ..++.++||||||++++++++ |..||....      .......+...                                
T Consensus       180 ~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~------~~~~~~~~~~~--------------------------------  221 (259)
T PF07714_consen  180 GEYTKKSDVYSFGMLLYEILTLGKFPFSDYD------NEEIIEKLKQG--------------------------------  221 (259)
T ss_dssp             SEESHHHHHHHHHHHHHHHHTTSSGTTTTSC------HHHHHHHHHTT--------------------------------
T ss_pred             ccccccccccccccccccccccccccccccc------ccccccccccc--------------------------------
Confidence            889999999999999999999 678875442      21111111000                                


Q ss_pred             CCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhc
Q 026540          157 FWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ  201 (237)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  201 (237)
                               .....+..++..+.+++..||..+|.+|||+.++++
T Consensus       222 ---------~~~~~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~  257 (259)
T PF07714_consen  222 ---------QRLPIPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQ  257 (259)
T ss_dssp             ---------EETTSBTTSBHHHHHHHHHHT-SSGGGS--HHHHHH
T ss_pred             ---------ccceeccchhHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence                     011123345778899999999999999999999975

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=99.91  E-value=4.6e-24  Score=170.48  Aligned_cols=153  Identities=14%  Similarity=0.157  Sum_probs=117.7

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC----cccCcCCCcccchHHhhhc
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ----FAEEIQTRQYRAPEVILRA   78 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~----~~~~~~~~~~~~PE~~~~~   78 (237)
                      +++..+..++.+++.+|.|+|..+++|+||||+||+++.++.++++|||++......    .....++..|++||.+...
T Consensus       104 ~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  183 (270)
T cd05056         104 LDLASLILYSYQLSTALAYLESKRFVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDESYYKASKGKLPIKWMAPESINFR  183 (270)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCeeccccChheEEEecCCCeEEccCceeeecccccceecCCCCccccccChhhhccC
Confidence            567888999999999999999999999999999999999999999999988654322    1112234579999998877


Q ss_pred             CCCchhhhhhhhhHHHHHhc-CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccC
Q 026540           79 GYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKF  157 (237)
Q Consensus        79 ~~~~~~diws~g~~l~~~~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (237)
                      .++.++|+||+|++++++++ |..||.+..      .......+..   .                              
T Consensus       184 ~~~~~~Di~slG~il~el~~~g~~pf~~~~------~~~~~~~~~~---~------------------------------  224 (270)
T cd05056         184 RFTSASDVWMFGVCMWEILMLGVKPFQGVK------NNDVIGRIEN---G------------------------------  224 (270)
T ss_pred             CCCchhhhHHHHHHHHHHHHcCCCCCCCCC------HHHHHHHHHc---C------------------------------
Confidence            88999999999999999885 999997553      1111111100   0                              


Q ss_pred             CchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcC
Q 026540          158 WSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQH  202 (237)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h  202 (237)
                              .....+..++..+.+++.+|+..+|.+|||+.+++..
T Consensus       225 --------~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~  261 (270)
T cd05056         225 --------ERLPMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQ  261 (270)
T ss_pred             --------CcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence                    0011233456789999999999999999999998753

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=99.91  E-value=4.3e-24  Score=170.77  Aligned_cols=153  Identities=16%  Similarity=0.207  Sum_probs=116.6

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC-----cccCcCCCcccchHHhhh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ-----FAEEIQTRQYRAPEVILR   77 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~-----~~~~~~~~~~~~PE~~~~   77 (237)
                      +++..+.+++.|++.||.|+|+.++.|+||||+||+++.++.++++|||++......     .....++..|++||.+..
T Consensus       110 l~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~  189 (273)
T cd05074         110 LPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCMLNENMTVCVADFGLSKKIYSGDYYRQGCASKLPVKWLALESLAD  189 (273)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCEeecccchhhEEEcCCCCEEECcccccccccCCcceecCCCccCchhhcCHhHHhc
Confidence            466788999999999999999999999999999999999999999999988654321     112234567999999988


Q ss_pred             cCCCchhhhhhhhhHHHHHhc-CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcccc
Q 026540           78 AGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLK  156 (237)
Q Consensus        78 ~~~~~~~diws~g~~l~~~~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (237)
                      ..++.++|+||+|++++++++ |..||....      .......+..   .                             
T Consensus       190 ~~~~~~sDi~slG~il~el~~~g~~p~~~~~------~~~~~~~~~~---~-----------------------------  231 (273)
T cd05074         190 NVYTTHSDVWAFGVTMWEIMTRGQTPYAGVE------NSEIYNYLIK---G-----------------------------  231 (273)
T ss_pred             CccchhhhhHHHHHHHHHHhhCCCCCCCCCC------HHHHHHHHHc---C-----------------------------
Confidence            888999999999999999998 778876442      1111110000   0                             


Q ss_pred             CCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcC
Q 026540          157 FWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQH  202 (237)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h  202 (237)
                               .....+...+..+.+++.+||..+|.+|||+.++++.
T Consensus       232 ---------~~~~~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~  268 (273)
T cd05074         232 ---------NRLKQPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQ  268 (273)
T ss_pred             ---------CcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence                     0000112345688999999999999999999998863

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=99.90  E-value=5.1e-24  Score=190.69  Aligned_cols=103  Identities=19%  Similarity=0.174  Sum_probs=89.4

Q ss_pred             hHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCc---------------------Cccc
Q 026540            4 VEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK---------------------QFAE   62 (237)
Q Consensus         4 ~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~---------------------~~~~   62 (237)
                      +...+..++.|++.||.|+|..+++||||||+||+++.++.++++|||++.....                     ....
T Consensus       111 sv~~iL~I~~QIa~AL~yLHs~GIIHRDLKPeNILLd~dg~vKLiDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~  190 (932)
T PRK13184        111 SVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILLGLFGEVVILDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGK  190 (932)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHCCccccCCchheEEEcCCCCEEEEecCcceecccccccccccccccccccccccccCCC
Confidence            3456788999999999999999999999999999999999999999999865410                     0112


Q ss_pred             CcCCCcccchHHhhhcCCCchhhhhhhhhHHHHHhcCCcccCCC
Q 026540           63 EIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPK  106 (237)
Q Consensus        63 ~~~~~~~~~PE~~~~~~~~~~~diws~g~~l~~~~~g~~~f~~~  106 (237)
                      .+|++.|+|||.+.+..++.++|+||+||+++++++|..||...
T Consensus       191 ~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~  234 (932)
T PRK13184        191 IVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRK  234 (932)
T ss_pred             CCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCc
Confidence            46899999999998888999999999999999999999999654

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=99.90  E-value=9.5e-24  Score=165.09  Aligned_cols=159  Identities=29%  Similarity=0.365  Sum_probs=124.0

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCc--CcccCcCCCcccchHHhhhcCC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK--QFAEEIQTRQYRAPEVILRAGY   80 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~--~~~~~~~~~~~~~PE~~~~~~~   80 (237)
                      +++..+..++.+++.++.++|..++.|+|++|+||+++.++.++++|||.+.....  ......++..|++||......+
T Consensus        84 ~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~  163 (244)
T smart00220       84 LSEDEARFYARQILSALEYLHSNGIIHRDLKPENILLDEDGHVKLADFGLARQLDPGGLLTTFVGTPEYMAPEVLLGKGY  163 (244)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeEECCCCcEEEccccceeeeccccccccccCCcCCCCHHHHccCCC
Confidence            56788899999999999999999999999999999999999999999999865543  2344566788999999988888


Q ss_pred             CchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCch
Q 026540           81 SFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSL  160 (237)
Q Consensus        81 ~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (237)
                      +.++|+|++|++++++++|..||....     ....    +.+........                             
T Consensus       164 ~~~~Di~slG~~l~~l~~~~~p~~~~~-----~~~~----~~~~~~~~~~~-----------------------------  205 (244)
T smart00220      164 GKAVDVWSLGVILYELLTGKPPFPGDD-----QLLE----LFKKIGKPKPP-----------------------------  205 (244)
T ss_pred             CchhhHHHHHHHHHHHHhCCCCCCCCC-----cHHH----HHHHHhccCCC-----------------------------
Confidence            899999999999999999999886521     1111    11111000000                             


Q ss_pred             hHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCc
Q 026540          161 DRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL  205 (237)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f  205 (237)
                            ........+..+.+++.+|+..+|.+||++.++++||||
T Consensus       206 ------~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~~~~~~~  244 (244)
T smart00220      206 ------FPPPEWKISPEAKDLIRKLLVKDPEKRLTAEEALQHPFF  244 (244)
T ss_pred             ------CccccccCCHHHHHHHHHHccCCchhccCHHHHhhCCCC
Confidence                  000000045678899999999999999999999999997

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=99.90  E-value=8.9e-24  Score=168.73  Aligned_cols=154  Identities=21%  Similarity=0.243  Sum_probs=109.9

Q ss_pred             hHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCc-----CcccCcCCCcccchHHhhh-
Q 026540            4 VEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK-----QFAEEIQTRQYRAPEVILR-   77 (237)
Q Consensus         4 ~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~-----~~~~~~~~~~~~~PE~~~~-   77 (237)
                      .+..+..++.|++.|+.|+|..+++||||||+||+++.++.++++|||++.....     ......++..|++||++.. 
T Consensus        98 ~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  177 (269)
T cd05042          98 QKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYITKDCHAVPLRWLAPELVEIR  177 (269)
T ss_pred             cHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEecCCCcEEEeccccccccccchheeccCCCCCcccccCHHHHhhc
Confidence            4567789999999999999999999999999999999999999999998754221     1122344567999999864 


Q ss_pred             ------cCCCchhhhhhhhhHHHHHhc-CCcccCCCCCCCCCChHHHHHHHHHHHC-CCCHHHHhcCCCchhhhcccCcc
Q 026540           78 ------AGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIG-KMPRKIAIGGAQSKDYFDRHGDL  149 (237)
Q Consensus        78 ------~~~~~~~diws~g~~l~~~~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  149 (237)
                            ..++.++|+||+|++++++++ |..||....      +.+.+........ .++                    
T Consensus       178 ~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~------~~~~~~~~~~~~~~~~~--------------------  231 (269)
T cd05042         178 GQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLS------DEQVLKQVVREQDIKLP--------------------  231 (269)
T ss_pred             cccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCC------HHHHHHHHhhccCccCC--------------------
Confidence                  246789999999999999998 677776442      2222211111000 000                    


Q ss_pred             chhccccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhc
Q 026540          150 KRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ  201 (237)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  201 (237)
                                       ........+..+.+++..|+ .||++|||++++++
T Consensus       232 -----------------~~~~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~  265 (269)
T cd05042         232 -----------------KPQLDLKYSDRWYEVMQFCW-LDPETRPTAEEVHE  265 (269)
T ss_pred             -----------------CCcccccCCHHHHHHHHHHh-cCcccccCHHHHHH
Confidence                             00112234566777888887 59999999999875

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=99.90  E-value=1e-23  Score=167.67  Aligned_cols=152  Identities=18%  Similarity=0.233  Sum_probs=115.6

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcCc----ccCcCCCcccchHHhhhc
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQF----AEEIQTRQYRAPEVILRA   78 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~~----~~~~~~~~~~~PE~~~~~   78 (237)
                      +++.++..++.+++.+|.|+|..++.|+||||+||+++.++.++++|||.+.......    ....++..|++||.+...
T Consensus        99 ~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~  178 (260)
T cd05073          99 QPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFG  178 (260)
T ss_pred             cCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCCcceeeccCCCcccccCCcccccccCHhHhccC
Confidence            4567788899999999999999999999999999999999999999999886443211    112334669999999888


Q ss_pred             CCCchhhhhhhhhHHHHHhc-CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccC
Q 026540           79 GYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKF  157 (237)
Q Consensus        79 ~~~~~~diws~g~~l~~~~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (237)
                      .++.++|+||+|++++++++ |..||....      .......+   ....                             
T Consensus       179 ~~~~~~Di~slG~~l~~l~t~g~~p~~~~~------~~~~~~~~---~~~~-----------------------------  220 (260)
T cd05073         179 SFTIKSDVWSFGILLMEIVTYGRIPYPGMS------NPEVIRAL---ERGY-----------------------------  220 (260)
T ss_pred             CcCccccchHHHHHHHHHHhcCCCCCCCCC------HHHHHHHH---hCCC-----------------------------
Confidence            88999999999999999998 888886542      11111111   0000                             


Q ss_pred             CchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhc
Q 026540          158 WSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ  201 (237)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  201 (237)
                               ....+...+.++.+++.+|++.+|++||++.++++
T Consensus       221 ---------~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~  255 (260)
T cd05073         221 ---------RMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQS  255 (260)
T ss_pred             ---------CCCCcccCCHHHHHHHHHHcccCcccCcCHHHHHH
Confidence                     00112234567899999999999999999998864

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.90  E-value=6.1e-24  Score=170.96  Aligned_cols=166  Identities=17%  Similarity=0.193  Sum_probs=116.1

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcCc------ccCcCCCcccchHHhh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQF------AEEIQTRQYRAPEVIL   76 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~~------~~~~~~~~~~~PE~~~   76 (237)
                      +++..+..++.|++.||.|+|..++.|+||||+||+++.++.++|+|||++.......      ....++..|++||.+.
T Consensus       105 l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  184 (284)
T cd05081         105 LDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNILVESENRVKIGDFGLTKVLPQDKEYYKVREPGESPIFWYAPESLT  184 (284)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCceeccCCHhhEEECCCCeEEECCCcccccccCCCcceeecCCCCCceEeeCHHHhc
Confidence            5678889999999999999999999999999999999999999999999986543211      1112344699999998


Q ss_pred             hcCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcccc
Q 026540           77 RAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLK  156 (237)
Q Consensus        77 ~~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (237)
                      +..++.++|+||+|++++++++|..++.....       .    ..+..+.....        ...              
T Consensus       185 ~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~-------~----~~~~~~~~~~~--------~~~--------------  231 (284)
T cd05081         185 ESKFSVASDVWSFGVVLYELFTYSDKSCSPPA-------E----FMRMMGNDKQG--------QMI--------------  231 (284)
T ss_pred             cCCcChHHHHHHHHHHHHHHhhcCCcCCCcch-------h----hhhhccccccc--------ccc--------------
Confidence            88899999999999999999998765533210       0    00000000000        000              


Q ss_pred             CCchhHHhhh--hcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhc
Q 026540          157 FWSLDRLLVD--KYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ  201 (237)
Q Consensus       157 ~~~~~~~~~~--~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  201 (237)
                      ...+......  ....+..++..+.+|+.+||..+|++|||+.++++
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~  278 (284)
T cd05081         232 VYHLIELLKNNGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELAL  278 (284)
T ss_pred             hHHHHHHHhcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence            0000000000  11123345678999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.90  E-value=1e-23  Score=177.31  Aligned_cols=154  Identities=16%  Similarity=0.151  Sum_probs=117.8

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC-----cccCcCCCcccchHHhhh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ-----FAEEIQTRQYRAPEVILR   77 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~-----~~~~~~~~~~~~PE~~~~   77 (237)
                      ++..++.+++.|++.||.|+|..+++||||||+|||++.++.++++|||++......     .....++..|++||.+.+
T Consensus       236 l~~~~~~~~~~qi~~aL~~LH~~~ivHrdlkp~NiLl~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  315 (401)
T cd05107         236 LSYMDLVGFSYQVANGMEFLASKNCVHRDLAARNVLICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFN  315 (401)
T ss_pred             CCHHHHHHHHHHHHHHHHHHhcCCcCcccCCcceEEEeCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcC
Confidence            567788999999999999999999999999999999999999999999998653211     112345678999999988


Q ss_pred             cCCCchhhhhhhhhHHHHHhc-CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcccc
Q 026540           78 AGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLK  156 (237)
Q Consensus        78 ~~~~~~~diws~g~~l~~~~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (237)
                      ..++.++|+||+|++++++++ |..||....      .........  ....                            
T Consensus       316 ~~~~~~~DvwslGvil~e~l~~g~~P~~~~~------~~~~~~~~~--~~~~----------------------------  359 (401)
T cd05107         316 NLYTTLSDVWSFGILLWEIFTLGGTPYPELP------MNEQFYNAI--KRGY----------------------------  359 (401)
T ss_pred             CCCCcHhHHHHHHHHHHHHHHcCCCCCCCCC------chHHHHHHH--HcCC----------------------------
Confidence            888999999999999999997 788885432      111111000  0000                            


Q ss_pred             CCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcC
Q 026540          157 FWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQH  202 (237)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h  202 (237)
                                ....+...+.++.+++.+|++.+|.+||+++++++.
T Consensus       360 ----------~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~  395 (401)
T cd05107         360 ----------RMAKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHL  395 (401)
T ss_pred             ----------CCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence                      001122346788999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.90  E-value=4e-24  Score=190.80  Aligned_cols=153  Identities=16%  Similarity=0.236  Sum_probs=124.1

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecC-cCccc----CcCCCcccchHHhh
Q 026540            2 TIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRAN-KQFAE----EIQTRQYRAPEVIL   76 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~-~~~~~----~~~~~~~~~PE~~~   76 (237)
                      +|+..+...++.+|+.|++||+.+|.+||||..+|+|++....+||+|||+|+... ..+..    -.-+..|||||.+.
T Consensus       798 ~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL~~~r~VKIaDFGlArDiy~~~yyr~~~~a~lPvkWm~PEsl~  877 (1025)
T KOG1095|consen  798 NLSMRDLLAFALDVAKGMNYLESKHFVHRDLAARNCLLDERRVVKIADFGLARDIYDKDYYRKHGEAMLPVKWMPPESLK  877 (1025)
T ss_pred             CCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhhheeecccCcEEEcccchhHhhhhchheeccCccccceecCCHHHHh
Confidence            46788999999999999999999999999999999999999999999999997432 22221    13356899999999


Q ss_pred             hcCCCchhhhhhhhhHHHHHhc-CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccc
Q 026540           77 RAGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRL  155 (237)
Q Consensus        77 ~~~~~~~~diws~g~~l~~~~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (237)
                      .+.++.++|+|||||++||+++ |..||.+..      +.+.+....                                 
T Consensus       878 d~iFtskSDvWsFGVllWEifslG~~PY~~~~------n~~v~~~~~---------------------------------  918 (1025)
T KOG1095|consen  878 DGIFTSKSDVWSFGVLLWEIFSLGATPYPSRS------NFEVLLDVL---------------------------------  918 (1025)
T ss_pred             hcccccccchhhhHHHHHHHHhCCCCCCCCcc------hHHHHHHHH---------------------------------
Confidence            9999999999999999999997 778887663      222221111                                 


Q ss_pred             cCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhc
Q 026540          156 KFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ  201 (237)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  201 (237)
                              ...+...|..|+..+.+++..|++-+|++||++..+++
T Consensus       919 --------~ggRL~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~  956 (1025)
T KOG1095|consen  919 --------EGGRLDPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVE  956 (1025)
T ss_pred             --------hCCccCCCCCCChHHHHHHHHHccCChhhCccHHHHHh
Confidence                    11123346678888999999999999999999999987

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=99.90  E-value=1.4e-23  Score=168.57  Aligned_cols=152  Identities=20%  Similarity=0.171  Sum_probs=116.4

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcCcc-----cCcCCCcccchHHhhh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQFA-----EEIQTRQYRAPEVILR   77 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~~~-----~~~~~~~~~~PE~~~~   77 (237)
                      +++..+..++.|++.|+.|+|..+++|+||||+||+++.++.++|+|||.+........     ...++..|++||.+..
T Consensus       106 ~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~  185 (279)
T cd05057         106 IGSQYLLNWCVQIAKGMSYLEEKRLVHRDLAARNVLVKTPQHVKITDFGLAKLLDVDEKEYHAEGGKVPIKWMALESILH  185 (279)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCEEecccCcceEEEcCCCeEEECCCcccccccCcccceecCCCcccccccCHHHhhc
Confidence            56889999999999999999999999999999999999999999999998865432111     1122457999999988


Q ss_pred             cCCCchhhhhhhhhHHHHHhc-CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcccc
Q 026540           78 AGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLK  156 (237)
Q Consensus        78 ~~~~~~~diws~g~~l~~~~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (237)
                      ..++.++|+||+|++++++++ |..||....      ..+....+ ...                               
T Consensus       186 ~~~~~~~Di~slG~~l~el~~~g~~p~~~~~------~~~~~~~~-~~~-------------------------------  227 (279)
T cd05057         186 RIYTHKSDVWSYGVTVWELMTFGAKPYEGIP------AVEIPDLL-EKG-------------------------------  227 (279)
T ss_pred             CCcCchhhHHHHHHHHHHHhcCCCCCCCCCC------HHHHHHHH-hCC-------------------------------
Confidence            888999999999999999998 999986542      11111110 000                               


Q ss_pred             CCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhc
Q 026540          157 FWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ  201 (237)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  201 (237)
                               .....+..++..+.+++.+||..+|.+|||+.++++
T Consensus       228 ---------~~~~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~  263 (279)
T cd05057         228 ---------ERLPQPPICTIDVYMVLVKCWMIDAESRPTFKELIN  263 (279)
T ss_pred             ---------CCCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence                     001112234567889999999999999999998864

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=99.90  E-value=1.1e-23  Score=168.61  Aligned_cols=154  Identities=18%  Similarity=0.258  Sum_probs=117.7

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCc----CcccCcCCCcccchHHhhhc
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK----QFAEEIQTRQYRAPEVILRA   78 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~----~~~~~~~~~~~~~PE~~~~~   78 (237)
                      +++.++..++.|++++|.|+|..+++|+||||+||+++.++.++++|||.+.....    ......++..|++||.+.+.
T Consensus       114 l~~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~  193 (275)
T cd05046         114 LSTKQKVALCTQIALGMDHLSNARFVHRDLAARNCLVSSQREVKVSLLSLSKDVYNSEYYKLRNALIPLRWLAPEAVQED  193 (275)
T ss_pred             CCHHHHHHHHHHHHHHHHHhhhcCcccCcCccceEEEeCCCcEEEcccccccccCcccccccCCceeEEeecChhhhccC
Confidence            67889999999999999999999999999999999999999999999998753221    11223446679999999888


Q ss_pred             CCCchhhhhhhhhHHHHHhc-CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccC
Q 026540           79 GYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKF  157 (237)
Q Consensus        79 ~~~~~~diws~g~~l~~~~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (237)
                      .++.++|+||+|++++++++ |..||....      ..........  +..                             
T Consensus       194 ~~~~~~Di~slG~~l~~l~~~~~~p~~~~~------~~~~~~~~~~--~~~-----------------------------  236 (275)
T cd05046         194 DFSTKSDVWSFGVLMWEVFTQGELPFYGLS------DEEVLNRLQA--GKL-----------------------------  236 (275)
T ss_pred             CCCchhhHHHHHHHHHHHHhCCCCCccccc------hHHHHHHHHc--CCc-----------------------------
Confidence            88899999999999999998 777885432      1111111000  000                             


Q ss_pred             CchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcC
Q 026540          158 WSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQH  202 (237)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h  202 (237)
                               ....+..++..+.+++.+||+.+|.+|||+.+++..
T Consensus       237 ---------~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~  272 (275)
T cd05046         237 ---------ELPVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSA  272 (275)
T ss_pred             ---------CCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHH
Confidence                     011123456788999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=99.90  E-value=1.9e-23  Score=178.46  Aligned_cols=169  Identities=14%  Similarity=0.146  Sum_probs=114.8

Q ss_pred             hHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC--c--ccCcCCCcccchHHhhhcC
Q 026540            4 VEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ--F--AEEIQTRQYRAPEVILRAG   79 (237)
Q Consensus         4 ~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~--~--~~~~~~~~~~~PE~~~~~~   79 (237)
                      ....+..++.|++.+|.|+|..+++||||||+||+++.++.++|+|||++......  .  ....+++.|++||.+....
T Consensus       307 ~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aPE~l~~~~  386 (507)
T PLN03224        307 DINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPPEELVMPQ  386 (507)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHCCeecCCCchHhEEECCCCcEEEEeCcCccccccCCccCccccCCCcceeChhhhcCCC
Confidence            45678899999999999999999999999999999999999999999998654321  1  1223478999999986432


Q ss_pred             --------------------C--CchhhhhhhhhHHHHHhcCCc-ccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcC
Q 026540           80 --------------------Y--SFSVDMWSFACTAFELATGDM-LFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGG  136 (237)
Q Consensus        80 --------------------~--~~~~diws~g~~l~~~~~g~~-~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  136 (237)
                                          +  ....|+||+||++++|+++.. ||....         ......+.....-       
T Consensus       387 ~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~---------~f~~~~~~~~~~~-------  450 (507)
T PLN03224        387 SCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIR---------LFNTELRQYDNDL-------  450 (507)
T ss_pred             CCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchh---------hhhhHHhhccchH-------
Confidence                                1  124699999999999999874 554321         0000000000000       


Q ss_pred             CCchhhhcccCccchhccccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCC---CCCCCHHHHhcCCCcCc
Q 026540          137 AQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTP---EKRPTAQQCLQHPWLSL  207 (237)
Q Consensus       137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP---~~R~t~~ell~hp~f~~  207 (237)
                                ..+.....         ..-.+...+..+....+|+.+||..+|   .+|+|++|+|+||||..
T Consensus       451 ----------~~~r~~~~---------~~~~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~Hp~f~~  505 (507)
T PLN03224        451 ----------NRWRMYKG---------QKYDFSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSHRFFLP  505 (507)
T ss_pred             ----------HHHHhhcc---------cCCCcccccccChHHHHHHHHHhccCCCCcccCCCHHHHhCCCCcCC
Confidence                      00000000         000011233457888999999999766   78999999999999963

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=99.90  E-value=1.2e-23  Score=167.79  Aligned_cols=152  Identities=15%  Similarity=0.191  Sum_probs=116.1

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcCc------ccCcCCCcccchHHhh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQF------AEEIQTRQYRAPEVIL   76 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~~------~~~~~~~~~~~PE~~~   76 (237)
                      +++.++..++.|++.+|.++|..+++|+||||+||+++.++.++++|||.+.......      ....++..|++||.+.
T Consensus       103 ~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~  182 (267)
T cd05066         103 FTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIA  182 (267)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCEeehhhchhcEEECCCCeEEeCCCCcccccccccceeeecCCCccceeecCHhHhc
Confidence            4677889999999999999999999999999999999999999999999886543221      1112245799999998


Q ss_pred             hcCCCchhhhhhhhhHHHHHhc-CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccc
Q 026540           77 RAGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRL  155 (237)
Q Consensus        77 ~~~~~~~~diws~g~~l~~~~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (237)
                      +..++.++|+||+|++++++++ |..||....      ..+....+.+..                              
T Consensus       183 ~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~------~~~~~~~~~~~~------------------------------  226 (267)
T cd05066         183 YRKFTSASDVWSYGIVMWEVMSYGERPYWEMS------NQDVIKAIEEGY------------------------------  226 (267)
T ss_pred             cCccCchhhhHHHHHHHHHHhcCCCCCcccCC------HHHHHHHHhCCC------------------------------
Confidence            8889999999999999999886 999986542      111111110000                              


Q ss_pred             cCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhc
Q 026540          156 KFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ  201 (237)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  201 (237)
                                 ....+...+..+.+++.+|++.+|.+||++.++++
T Consensus       227 -----------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~  261 (267)
T cd05066         227 -----------RLPAPMDCPAALHQLMLDCWQKDRNERPKFEQIVS  261 (267)
T ss_pred             -----------cCCCCCCCCHHHHHHHHHHcccCchhCCCHHHHHH
Confidence                       00112234567889999999999999999999875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.90  E-value=1.3e-23  Score=168.79  Aligned_cols=165  Identities=18%  Similarity=0.162  Sum_probs=117.6

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcCc------ccCcCCCcccchHHhh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQF------AEEIQTRQYRAPEVIL   76 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~~------~~~~~~~~~~~PE~~~   76 (237)
                      +++.++..++.|++.+|.|+|..++.|+||||+||+++.++.++++|||.+.......      ....++..|++||.+.
T Consensus       106 ~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~  185 (284)
T cd05038         106 INLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILVESEDLVKISDFGLAKVLPEDKDYYYVKEPGESPIFWYAPECLR  185 (284)
T ss_pred             cCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEcccccccccccCCcceeccCCCCCcccccCcHHHc
Confidence            5678889999999999999999999999999999999999999999999886544211      1123345699999998


Q ss_pred             hcCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcccc
Q 026540           77 RAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLK  156 (237)
Q Consensus        77 ~~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (237)
                      +..++.++|+||+|++++++++|..|+.......           ....+....      ..   ..      .      
T Consensus       186 ~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~-----------~~~~~~~~~------~~---~~------~------  233 (284)
T cd05038         186 TSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEF-----------LRMIGIAQG------QM---IV------T------  233 (284)
T ss_pred             cCCCCcccchHHHhhhhheeeccCCCcccccchh-----------ccccccccc------cc---cH------H------
Confidence            8888999999999999999999998876432110           000000000      00   00      0      


Q ss_pred             CCchhHHhhh--hcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhc
Q 026540          157 FWSLDRLLVD--KYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ  201 (237)
Q Consensus       157 ~~~~~~~~~~--~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  201 (237)
                        .....+..  ....+..++.++.+++.+||+.+|.+|||+.++++
T Consensus       234 --~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~  278 (284)
T cd05038         234 --RLLELLKEGERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLIL  278 (284)
T ss_pred             --HHHHHHHcCCcCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHH
Confidence              00000000  01112344578999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=99.90  E-value=2.1e-23  Score=166.57  Aligned_cols=152  Identities=15%  Similarity=0.201  Sum_probs=115.1

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcCc-----ccCc---CCCcccchHH
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQF-----AEEI---QTRQYRAPEV   74 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~~-----~~~~---~~~~~~~PE~   74 (237)
                      +++.++..++.|++.+|.|+|..++.|+||||+||+++.++.++++|||++.......     ....   .+..|++||.
T Consensus       103 ~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~  182 (269)
T cd05065         103 FTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSSLGGKIPIRWTAPEA  182 (269)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCEeecccChheEEEcCCCcEEECCCccccccccCccccccccccCCCcceeecCHhH
Confidence            4677889999999999999999999999999999999999999999999875433211     1111   1346999999


Q ss_pred             hhhcCCCchhhhhhhhhHHHHHhc-CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhc
Q 026540           75 ILRAGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIR  153 (237)
Q Consensus        75 ~~~~~~~~~~diws~g~~l~~~~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (237)
                      +.+..++.++|+||+|++++++++ |..||....      .......+....                            
T Consensus       183 ~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~------~~~~~~~i~~~~----------------------------  228 (269)
T cd05065         183 IAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMS------NQDVINAIEQDY----------------------------  228 (269)
T ss_pred             hccCcccchhhhhhhHHHHHHHhcCCCCCCCCCC------HHHHHHHHHcCC----------------------------
Confidence            988889999999999999999886 888886542      111111110000                            


Q ss_pred             cccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhc
Q 026540          154 RLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ  201 (237)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  201 (237)
                                   ....+..++..+.+++.+||..+|.+||++.++++
T Consensus       229 -------------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~  263 (269)
T cd05065         229 -------------RLPPPMDCPTALHQLMLDCWQKDRNARPKFGQIVS  263 (269)
T ss_pred             -------------cCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence                         00112234567889999999999999999999985

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.90  E-value=3.4e-23  Score=170.94  Aligned_cols=103  Identities=21%  Similarity=0.146  Sum_probs=89.4

Q ss_pred             hHHHHHHHHHHHHhhhhhhhhhc---CCccCCCCCccccCCCCcEEEeecCcceecCc-Cc--ccC-cCCCcccchHHhh
Q 026540            4 VEKKLKRRAKRAVANISIRRASM---GGIELPKPERCLDGIDMRCKVVDFGNACRANK-QF--AEE-IQTRQYRAPEVIL   76 (237)
Q Consensus         4 ~~~~~~~~~~~~l~~l~~~~~~~---~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~-~~--~~~-~~~~~~~~PE~~~   76 (237)
                      +-.+..+|+.+++.||+|||...   ++||||||+|||+|.+..+||+|||++..... ..  ... .||.+|++||...
T Consensus       172 ~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKlsDFGLa~~~~~~~~~~~~~~~gt~gY~~PEy~~  251 (361)
T KOG1187|consen  172 DWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLSDFGLAKLGPEGDTSVSTTVMGTFGYLAPEYAS  251 (361)
T ss_pred             CHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEccCccCcccCCccccceeeecCCCCccCChhhhc
Confidence            45677899999999999999966   89999999999999999999999999965432 21  122 7899999999999


Q ss_pred             hcCCCchhhhhhhhhHHHHHhcCCcccCCC
Q 026540           77 RAGYSFSVDMWSFACTAFELATGDMLFAPK  106 (237)
Q Consensus        77 ~~~~~~~~diws~g~~l~~~~~g~~~f~~~  106 (237)
                      .+..+.++|+||||++++|+++|+.+....
T Consensus       252 ~g~lt~KsDVySFGVvllElitgr~~~d~~  281 (361)
T KOG1187|consen  252 TGKLTEKSDVYSFGVVLLELITGRKAVDQS  281 (361)
T ss_pred             cCCcCcccccccchHHHHHHHhCCcccCCC
Confidence            989999999999999999999999776543

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=99.90  E-value=3e-23  Score=165.62  Aligned_cols=154  Identities=17%  Similarity=0.227  Sum_probs=118.3

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhh-hcCCccCCCCCccccCCCCcEEEeecCcceecCcC--cccCcCCCcccchHHhhhcC
Q 026540            3 IVEKKLKRRAKRAVANISIRRA-SMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ--FAEEIQTRQYRAPEVILRAG   79 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~-~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~--~~~~~~~~~~~~PE~~~~~~   79 (237)
                      +++.++..++.|++.+|.|+|. .++.|+||||+||+++.++.++++|||.+......  .....++..|++||.+.+..
T Consensus       110 ~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~  189 (269)
T cd08528         110 FTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIMLGEDDKVTITDFGLAKQKQPESKLTSVVGTILYSCPEIVKNEP  189 (269)
T ss_pred             CCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEECCCCcEEEecccceeecccccccccccCcccCcChhhhcCCC
Confidence            5677889999999999999996 67899999999999999999999999998654432  23446788899999999888


Q ss_pred             CCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCc
Q 026540           80 YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWS  159 (237)
Q Consensus        80 ~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (237)
                      ++.++|+||+|+++|++++|..||....      ..........   ...                            .+
T Consensus       190 ~~~~~Dv~slG~ll~~l~~g~~p~~~~~------~~~~~~~~~~---~~~----------------------------~~  232 (269)
T cd08528         190 YGEKADVWAFGCILYQMCTLQPPFYSTN------MLSLATKIVE---AVY----------------------------EP  232 (269)
T ss_pred             CchHHHHHHHHHHHHHHHhCCCcccccC------HHHHHHHHhh---ccC----------------------------Cc
Confidence            9999999999999999999999986432      1111111100   000                            00


Q ss_pred             hhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcC
Q 026540          160 LDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQH  202 (237)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h  202 (237)
                               ......+..+.+++.+||+.||.+||++.|+..+
T Consensus       233 ---------~~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~  266 (269)
T cd08528         233 ---------LPEGMYSEDVTDVITSCLTPDAEARPDIIQVSAM  266 (269)
T ss_pred             ---------CCcccCCHHHHHHHHHHCCCCCccCCCHHHHHHH
Confidence                     0011235678899999999999999999998753

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=99.89  E-value=3.4e-23  Score=165.40  Aligned_cols=103  Identities=18%  Similarity=0.187  Sum_probs=84.7

Q ss_pred             hHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC-----cccCcCCCcccchHHhhhc
Q 026540            4 VEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ-----FAEEIQTRQYRAPEVILRA   78 (237)
Q Consensus         4 ~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~-----~~~~~~~~~~~~PE~~~~~   78 (237)
                      ++..+..++.|++.|++|+|..+++|+||||+||+++.++.++++|||.+......     .....++..|++||++.+.
T Consensus        98 ~~~~~~~~~~qi~~al~~lH~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  177 (269)
T cd05087          98 DPTTLQRMACEIALGLLHLHKNNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYVTPDQLWVPLRWIAPELVDEV  177 (269)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEECCccccccccCcceeecCCCcCCcccccCHhHhccc
Confidence            45667789999999999999999999999999999999999999999988543221     1123456789999998642


Q ss_pred             -------CCCchhhhhhhhhHHHHHhc-CCcccCCC
Q 026540           79 -------GYSFSVDMWSFACTAFELAT-GDMLFAPK  106 (237)
Q Consensus        79 -------~~~~~~diws~g~~l~~~~~-g~~~f~~~  106 (237)
                             .++.++|+||+|++++++++ |..||...
T Consensus       178 ~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~  213 (269)
T cd05087         178 HGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHL  213 (269)
T ss_pred             cccccccCCCccchhHHHHHHHHHHHhCCCCCCCCC
Confidence                   35778999999999999996 99898644

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.89  E-value=3.6e-23  Score=184.15  Aligned_cols=101  Identities=24%  Similarity=0.345  Sum_probs=74.7

Q ss_pred             CCCcccchHHhhhcCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhc
Q 026540           65 QTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFD  144 (237)
Q Consensus        65 ~~~~~~~PE~~~~~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  144 (237)
                      ||+.|++||++.+..++.++|+||+||++|++++|..||.+..      ....+..+...  ..                
T Consensus       542 GT~~Y~APE~l~~~~~~~~~DiwSlG~il~ElltG~~pf~~~~------~~~~~~~il~~--~~----------------  597 (669)
T cd05610         542 GTPDYLAPELLLGKPHGPAVDWWALGVCLFEFLTGIPPFNDET------PQQVFQNILNR--DI----------------  597 (669)
T ss_pred             eCccccCHHHcCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCC------HHHHHHHHHhc--CC----------------
Confidence            4778999999999889999999999999999999999997652      22222211110  00                


Q ss_pred             ccCccchhccccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccC
Q 026540          145 RHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNS  210 (237)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~  210 (237)
                                  .++         .....++..+.+++.+||..||.+||++.|+++||||....+
T Consensus       598 ------------~~p---------~~~~~~~~~~~~~l~~lL~~dP~~R~ta~e~l~h~~~~~~~~  642 (669)
T cd05610         598 ------------PWP---------EGEEKLSVNAQNAIEILLTMDPTKRAGLKELKQHPLFHGVDW  642 (669)
T ss_pred             ------------CCC---------cccccCCHHHHHHHHHHcccChhHCcCHHHHHhCHhhcCCCH
Confidence                        000         001123567889999999999999999999999999987643

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=99.89  E-value=7.9e-23  Score=163.32  Aligned_cols=155  Identities=19%  Similarity=0.193  Sum_probs=108.7

Q ss_pred             hHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCc-----CcccCcCCCcccchHHhhhc
Q 026540            4 VEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK-----QFAEEIQTRQYRAPEVILRA   78 (237)
Q Consensus         4 ~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~-----~~~~~~~~~~~~~PE~~~~~   78 (237)
                      .+..+..++.|++.||.|+|..+++||||||+||+++.++.++++|||++.....     ......++..|++||++...
T Consensus        97 ~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  176 (268)
T cd05086          97 QLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIETEDDKCVPLRWLAPELVGEF  176 (268)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEEcCCccEEecccccccccCcchhhhcccCCcCcccccCchhcccc
Confidence            3456778999999999999999999999999999999999999999998743211     11234567889999998532


Q ss_pred             -------CCCchhhhhhhhhHHHHHhc-CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccc
Q 026540           79 -------GYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLK  150 (237)
Q Consensus        79 -------~~~~~~diws~g~~l~~~~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (237)
                             .++.++|+||+|++++++++ |..||....      +...........  ..           ..        
T Consensus       177 ~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~------~~~~~~~~~~~~--~~-----------~~--------  229 (268)
T cd05086         177 HGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLS------DREVLNHVIKDQ--QV-----------KL--------  229 (268)
T ss_pred             cCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCC------HHHHHHHHHhhc--cc-----------cc--------
Confidence                   35678999999999999986 456775432      222222111100  00           00        


Q ss_pred             hhccccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhc
Q 026540          151 RIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ  201 (237)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  201 (237)
                                   .  ........+..+.+++..|+ .+|.+||+++++++
T Consensus       230 -------------~--~~~~~~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~  264 (268)
T cd05086         230 -------------F--KPQLELPYSERWYEVLQFCW-LSPEKRATAEEVHR  264 (268)
T ss_pred             -------------C--CCccCCCCcHHHHHHHHHHh-hCcccCCCHHHHHH
Confidence                         0  00111123566778899898 68999999999975

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]

Probab=99.88  E-value=2.4e-23  Score=180.20  Aligned_cols=159  Identities=22%  Similarity=0.321  Sum_probs=128.6

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCc---CcccCcCCCcccchHHhhhc-
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK---QFAEEIQTRQYRAPEVILRA-   78 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~---~~~~~~~~~~~~~PE~~~~~-   78 (237)
                      +.|..++.|++.++.|+.++|..+++|||+|-.|||++.++.||++|||.+.....   +....+||++|||||++.+. 
T Consensus       120 l~E~~IaYI~re~lrgl~HLH~nkviHRDikG~NiLLT~e~~VKLvDFGvSaQldsT~grRnT~iGtP~WMAPEViac~e  199 (953)
T KOG0587|consen  120 LKEEWIAYILREILRGLAHLHNNKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDSTVGRRNTFIGTPYWMAPEVIACDE  199 (953)
T ss_pred             hhhHHHHHHHHHHHHHHHHHhhcceeeecccCceEEEeccCcEEEeeeeeeeeeecccccccCcCCCcccccceeeeccc
Confidence            57889999999999999999999999999999999999999999999999865543   34567999999999999854 


Q ss_pred             ----CCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcc
Q 026540           79 ----GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRR  154 (237)
Q Consensus        79 ----~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (237)
                          .|+..+|+||+|++..+|..|.+|+.++=      ....   ++.+.-.+|+                        
T Consensus       200 ~~d~tyd~R~D~WsLGITaIEladG~PPl~DmH------Pmra---LF~IpRNPPP------------------------  246 (953)
T KOG0587|consen  200 SPDATYDYRSDLWSLGITAIEMAEGAPPLCDMH------PMRA---LFLIPRNPPP------------------------  246 (953)
T ss_pred             CCCCCcccccchhhccceeehhcCCCCCccCcc------hhhh---hccCCCCCCc------------------------
Confidence                36788999999999999999999987651      1111   1111111111                        


Q ss_pred             ccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcC
Q 026540          155 LKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLS  206 (237)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~  206 (237)
                                  ...-+..-+++|.+||..||..|-++||+..++|+|||.+
T Consensus       247 ------------kLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~hpFi~  286 (953)
T KOG0587|consen  247 ------------KLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLKHPFIT  286 (953)
T ss_pred             ------------cccchhhHHHHHHHHHHHHHhhccccCcchhhhccCCccc
Confidence                        1112333478999999999999999999999999999998

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.87  E-value=8.7e-23  Score=177.90  Aligned_cols=173  Identities=18%  Similarity=0.217  Sum_probs=132.5

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC-------cccCcCCCcccchHHh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ-------FAEEIQTRQYRAPEVI   75 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~-------~~~~~~~~~~~~PE~~   75 (237)
                      ++..++--+++|++.|+.|+|++++.|||+|++|+++..++.+|++|||.+......       ....+|+..|.|||++
T Consensus       417 ~~~~e~~c~fKqL~~Gv~y~h~~GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~e~~~~~~~g~~gS~pY~apE~~  496 (601)
T KOG0590|consen  417 LTPLEADCFFKQLLRGVKYLHSMGLAHRDLKLENLLVTENGILKIIDFGAASVFRYPWEKNIHESSGIVGSDPYLAPEVL  496 (601)
T ss_pred             cchhhhhHHHHHHHHHHHHHHhcCceeccCccccEEEecCCceEEeecCcceeeccCcchhhhhhcCcccCCcCcCcccc
Confidence            455678889999999999999999999999999999999999999999988543321       2345789999999999


Q ss_pred             hhcCCC-chhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcc
Q 026540           76 LRAGYS-FSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRR  154 (237)
Q Consensus        76 ~~~~~~-~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (237)
                      .+..|. ...|+||.|+++..|.+|+.||.......     .+.                       .........    
T Consensus       497 ~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~-----~~~-----------------------~~~~~~~~~----  544 (601)
T KOG0590|consen  497 TGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSD-----NSF-----------------------KTNNYSDQR----  544 (601)
T ss_pred             cccccCcchhhhhhccceEEEEecCCCccccccccc-----cch-----------------------hhhcccccc----
Confidence            999885 56899999999999999999997553210     000                       000000000    


Q ss_pred             ccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccCCccc
Q 026540          155 LKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNSTRDE  214 (237)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~~~~~  214 (237)
                             ....+..+....++...+.+|.+||++||.+|.|+++|++.+||+...+|.-.
T Consensus       545 -------~~~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d~W~~~i~~c~v~  597 (601)
T KOG0590|consen  545 -------NIFEGPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILNDEWIRSIECCHVD  597 (601)
T ss_pred             -------ccccChHHHHHhchhhHHHHHHHHccCChhheecHHHHhhChHhhhcceEEec
Confidence                   00111122233457788999999999999999999999999999999888765

>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]

Probab=99.87  E-value=4.3e-23  Score=167.50  Aligned_cols=164  Identities=20%  Similarity=0.172  Sum_probs=124.8

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhhh--cCCccCCCCCccccCC---CCcEEEeecCcceecCc----------CcccCcCC
Q 026540            2 TIVEKKLKRRAKRAVANISIRRAS--MGGIELPKPERCLDGI---DMRCKVVDFGNACRANK----------QFAEEIQT   66 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~~--~~~h~d~kp~Nili~~---~~~~kl~dfg~~~~~~~----------~~~~~~~~   66 (237)
                      .++|++|+.|+.||+.||.|++..  -|+|.||||.|||+..   -|.+||.|||++..+..          ......||
T Consensus       564 lmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~GtacGeIKITDFGLSKIMdddSy~~vdGmeLTSQgAGT  643 (775)
T KOG1151|consen  564 LMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIKITDFGLSKIMDDDSYNSVDGMELTSQGAGT  643 (775)
T ss_pred             hhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCcccceeEeeecchhhhccCCccCcccceeeecccCce
Confidence            378999999999999999999975  5789999999999954   47899999999976542          23456889


Q ss_pred             CcccchHHhhhc----CCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhh
Q 026540           67 RQYRAPEVILRA----GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDY  142 (237)
Q Consensus        67 ~~~~~PE~~~~~----~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  142 (237)
                      -+|++||.+.-+    ..+.++|+||+|+++|+.+.|+.||.....     ..+.++.. .++..               
T Consensus       644 YWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqs-----QQdILqeN-TIlkA---------------  702 (775)
T KOG1151|consen  644 YWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQS-----QQDILQEN-TILKA---------------  702 (775)
T ss_pred             eeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchh-----HHHHHhhh-chhcc---------------
Confidence            999999998865    267789999999999999999999975531     11111110 00000               


Q ss_pred             hcccCccchhccccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCc
Q 026540          143 FDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSL  207 (237)
Q Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~  207 (237)
                                        ..   -.+......+.++.+||++||.+.-+.|..+.|+..||||..
T Consensus       703 ------------------tE---VqFP~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~dpyllP  746 (775)
T KOG1151|consen  703 ------------------TE---VQFPPKPVVSSEAKAFIRRCLAYRKEDRIDVQQLACDPYLLP  746 (775)
T ss_pred             ------------------ee---ccCCCCCccCHHHHHHHHHHHHhhhhhhhhHHHHccCccccc
Confidence                              00   001112234678899999999999999999999999999986

>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]

Probab=99.87  E-value=1.6e-22  Score=171.84  Aligned_cols=175  Identities=27%  Similarity=0.413  Sum_probs=122.4

Q ss_pred             ChhhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccC--CCC--cEEEeecCcceecC--cCcccCcCCCcccchHH
Q 026540            1 MTIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDG--IDM--RCKVVDFGNACRAN--KQFAEEIQTRQYRAPEV   74 (237)
Q Consensus         1 ~~~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~--~~~--~~kl~dfg~~~~~~--~~~~~~~~~~~~~~PE~   74 (237)
                      +||.|.+.+.++..+..||+|||..+|+||||||.||++-  .+|  .-||+|||.|+...  +.....+||..|++||+
T Consensus       115 ~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Arel~d~s~~~S~vGT~~YLhPel  194 (732)
T KOG4250|consen  115 YGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAARELDDNSLFTSLVGTEEYLHPEL  194 (732)
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecCCCceEEeeecccccccCCCCCeeeeecCchhhcChHH
Confidence            5899999999999999999999999999999999999883  333  34999999998655  44667899999999999


Q ss_pred             hhh-cCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhc
Q 026540           75 ILR-AGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIR  153 (237)
Q Consensus        75 ~~~-~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (237)
                      ... +.|+..+|.||+||++|+.+||..||.+..+.     ...-+.+....-..|........+     ..++.     
T Consensus       195 ~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~p-----k~~~~~~~~~~tkkp~~v~i~~~~-----~eNgp-----  259 (732)
T KOG4250|consen  195 YERQKKYTATVDLWSFGVTLYECATGELPFIPFGGP-----KNNKEIMWHIITKKPSGVAIGAQE-----EENGP-----  259 (732)
T ss_pred             HhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCc-----cccchhhhhhhccCCCceeEeeec-----ccCCc-----
Confidence            994 77999999999999999999999999876422     111112222222222222111100     00000     


Q ss_pred             cccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCC
Q 026540          154 RLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRP  194 (237)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~  194 (237)
                          ......++...+........+...+..+|+++|++|.
T Consensus       260 ----v~~s~~lP~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~  296 (732)
T KOG4250|consen  260 ----VEWSSTLPQPNHLSRGLATRLTKWLASMLEWNPRKRG  296 (732)
T ss_pred             ----eeeeccCCCcccccHHHHhhhhHHHHHHHhhhHHHhC
Confidence                0111112222333444556677888899999999998

>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]

Probab=99.87  E-value=1e-22  Score=174.57  Aligned_cols=150  Identities=15%  Similarity=0.195  Sum_probs=121.5

Q ss_pred             HHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC----cccCcC--CCcccchHHhhhcC
Q 026540            6 KKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ----FAEEIQ--TRQYRAPEVILRAG   79 (237)
Q Consensus         6 ~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~----~~~~~~--~~~~~~PE~~~~~~   79 (237)
                      -|.+..++.|++|+.||-.++++||||-..|||++.+..+|++|||+++.....    ++..-|  +..|.|||.+....
T Consensus       731 iQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILVNsnLvCKVsDFGLSRvledd~~~~ytt~GGKIPiRWTAPEAIa~RK  810 (996)
T KOG0196|consen  731 IQLVGMLRGIASGMKYLSDMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAAYTTLGGKIPIRWTAPEAIAYRK  810 (996)
T ss_pred             ehHHHHHHHHHHHhHHHhhcCchhhhhhhhheeeccceEEEeccccceeecccCCCccccccCCccceeecChhHhhhcc
Confidence            467889999999999999999999999999999999999999999999865432    122222  57899999999999


Q ss_pred             CCchhhhhhhhhHHHHHh-cCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCC
Q 026540           80 YSFSVDMWSFACTAFELA-TGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFW  158 (237)
Q Consensus        80 ~~~~~diws~g~~l~~~~-~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (237)
                      ++.++|+||+|+++||++ .|..||=+++      +++.+..+..-+                                 
T Consensus       811 FTsASDVWSyGIVmWEVmSyGERPYWdmS------NQdVIkaIe~gy---------------------------------  851 (996)
T KOG0196|consen  811 FTSASDVWSYGIVMWEVMSYGERPYWDMS------NQDVIKAIEQGY---------------------------------  851 (996)
T ss_pred             cCchhhccccceEEEEecccCCCcccccc------hHHHHHHHHhcc---------------------------------
Confidence            999999999999999976 4777876664      333333332221                                 


Q ss_pred             chhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcC
Q 026540          159 SLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQH  202 (237)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h  202 (237)
                              +..-|..|+..+.+|+..|++.|-..||++.||+.+
T Consensus       852 --------RLPpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~  887 (996)
T KOG0196|consen  852 --------RLPPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVST  887 (996)
T ss_pred             --------CCCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHH
Confidence                    122355688999999999999999999999999873

>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.86  E-value=6.8e-22  Score=173.87  Aligned_cols=153  Identities=20%  Similarity=0.286  Sum_probs=120.3

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCc-Cccc---Cc--CCCcccchHHhh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK-QFAE---EI--QTRQYRAPEVIL   76 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~-~~~~---~~--~~~~~~~PE~~~   76 (237)
                      |+.++...++.||+.|+.|+++.+.+|||+-..|||+..+..+|++|||+++.... ....   ..  -+..|||||.+.
T Consensus       415 L~~~dLlsfa~QIa~GMe~L~~~~~vHRDLAaRNVLi~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~  494 (609)
T KOG0200|consen  415 LTTKDLLSFAYQIANGMEYLASVPCVHRDLAARNVLITKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLF  494 (609)
T ss_pred             cCHHHHHHHHHHHHHHHHHHhhCCccchhhhhhhEEecCCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhc
Confidence            78899999999999999999999999999999999999999999999999975332 2111   11  245699999999


Q ss_pred             hcCCCchhhhhhhhhHHHHHhc-CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccc
Q 026540           77 RAGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRL  155 (237)
Q Consensus        77 ~~~~~~~~diws~g~~l~~~~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (237)
                      ...|+.++|+||+|+++||+++ |..||.+..     ...+....+..                                
T Consensus       495 ~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~-----~~~~l~~~l~~--------------------------------  537 (609)
T KOG0200|consen  495 DRVFTSKSDVWSFGILLWEIFTLGGTPYPGIP-----PTEELLEFLKE--------------------------------  537 (609)
T ss_pred             cCcccccchhhHHHHHHHHHhhCCCCCCCCCC-----cHHHHHHHHhc--------------------------------
Confidence            9889999999999999999987 667886521     11111111100                                


Q ss_pred             cCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhc
Q 026540          156 KFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ  201 (237)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  201 (237)
                               -.+...|..++.++.++++.|++.+|++||++.++.+
T Consensus       538 ---------G~r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~  574 (609)
T KOG0200|consen  538 ---------GNRMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVE  574 (609)
T ss_pred             ---------CCCCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHH
Confidence                     0022346667889999999999999999999998775

>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]

Probab=99.86  E-value=2.6e-22  Score=147.97  Aligned_cols=105  Identities=28%  Similarity=0.328  Sum_probs=90.5

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhhhc-CCccCCCCCccccCCCCcEEEeecCcceecCcCcc--cCcCCCcccchHHhhhc
Q 026540            2 TIVEKKLKRRAKRAVANISIRRASM-GGIELPKPERCLDGIDMRCKVVDFGNACRANKQFA--EEIQTRQYRAPEVILRA   78 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~~~-~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~~~--~~~~~~~~~~PE~~~~~   78 (237)
                      ++.|.-+.+++..++.||+|+|+.. ++|||+||+|||++.+|.+|+||||++..+.....  --.|-..|+|||.+...
T Consensus       144 ~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~dSiAkt~daGCkpYmaPEri~~e  223 (282)
T KOG0984|consen  144 TIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILINYDGQVKICDFGISGYLVDSIAKTMDAGCKPYMAPERINPE  223 (282)
T ss_pred             cCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEccCCcEEEcccccceeehhhhHHHHhcCCCccCChhhcCcc
Confidence            4678889999999999999999965 57999999999999999999999999865544332  23667899999998743


Q ss_pred             ----CCCchhhhhhhhhHHHHHhcCCcccCCC
Q 026540           79 ----GYSFSVDMWSFACTAFELATGDMLFAPK  106 (237)
Q Consensus        79 ----~~~~~~diws~g~~l~~~~~g~~~f~~~  106 (237)
                          +|+.++|+||+|+.+.|+.+++.||...
T Consensus       224 ~n~~gY~vksDvWSLGItmiElA~lr~PY~~w  255 (282)
T KOG0984|consen  224 LNQKGYSVKSDVWSLGITMIEMAILRFPYESW  255 (282)
T ss_pred             cCcccceeehhhhhhhhhhhhhhhcccccccc
Confidence                6899999999999999999999999754

>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.85  E-value=1.1e-21  Score=165.07  Aligned_cols=147  Identities=19%  Similarity=0.239  Sum_probs=118.6

Q ss_pred             HHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC-cccC---cCCCcccchHHhhhcCCCch
Q 026540            8 LKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ-FAEE---IQTRQYRAPEVILRAGYSFS   83 (237)
Q Consensus         8 ~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~-~~~~---~~~~~~~~PE~~~~~~~~~~   83 (237)
                      .+..+.||..|+.||...+.+||||-..|+|++.+..+|++|||+++.+... ++.-   ..++.|.+||.+....++.+
T Consensus       367 LlyMAtQIsSaMeYLEkknFIHRDLAARNCLVgEnhiVKvADFGLsRlMtgDTYTAHAGAKFPIKWTAPEsLAyNtFSiK  446 (1157)
T KOG4278|consen  367 LLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHIVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIK  446 (1157)
T ss_pred             HHHHHHHHHHHHHHHHHhhhhhhhhhhhhccccccceEEeeccchhhhhcCCceecccCccCcccccCcccccccccccc
Confidence            5678899999999999999999999999999999999999999999887643 3322   23678999999999999999


Q ss_pred             hhhhhhhhHHHHHhc-CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCchhH
Q 026540           84 VDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDR  162 (237)
Q Consensus        84 ~diws~g~~l~~~~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (237)
                      +|+|+||+++|++.+ |..||.+..       ..+...+++.                                      
T Consensus       447 SDVWAFGVLLWEIATYGMsPYPGid-------lSqVY~LLEk--------------------------------------  481 (1157)
T KOG4278|consen  447 SDVWAFGVLLWEIATYGMSPYPGID-------LSQVYGLLEK--------------------------------------  481 (1157)
T ss_pred             hhhHHHHHHHHHHHhcCCCCCCCcc-------HHHHHHHHhc--------------------------------------
Confidence            999999999999987 667876652       2222211110                                      


Q ss_pred             HhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhc
Q 026540          163 LLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ  201 (237)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  201 (237)
                        --++.-+.+|++...+|++.|++|+|..||++.++-+
T Consensus       482 --gyRM~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHq  518 (1157)
T KOG4278|consen  482 --GYRMDGPEGCPPKVYELMRACWNWSPSDRPSFAEIHQ  518 (1157)
T ss_pred             --cccccCCCCCCHHHHHHHHHHhcCCcccCccHHHHHH
Confidence              0022347789999999999999999999999998765

>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.85  E-value=7e-22  Score=165.27  Aligned_cols=153  Identities=18%  Similarity=0.203  Sum_probs=119.7

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecC---cCcccCcCCCcccchHHhhhcC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRAN---KQFAEEIQTRQYRAPEVILRAG   79 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~---~~~~~~~~~~~~~~PE~~~~~~   79 (237)
                      ++..+...++.++++||.|||+++.+||||-.+|+|++.+..+||+|||+++...   .......-+..|+|||.+..+-
T Consensus       259 v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAARNcL~~~~~~vKISDFGLs~~~~~~~~~~~~~klPirWLAPEtl~~~~  338 (474)
T KOG0194|consen  259 LPTLEKLRFCYDAARGLEYLHSKNCIHRDIAARNCLYSKKGVVKISDFGLSRAGSQYVMKKFLKKLPIRWLAPETLNTGI  338 (474)
T ss_pred             CCHHHHHHHHHHHHhHHHHHHHCCCcchhHhHHHheecCCCeEEeCccccccCCcceeeccccccCcceecChhhhccCc
Confidence            5677888999999999999999999999999999999999999999999985432   1110113367899999999999


Q ss_pred             CCchhhhhhhhhHHHHHhc-CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCC
Q 026540           80 YSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFW  158 (237)
Q Consensus        80 ~~~~~diws~g~~l~~~~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (237)
                      |+.++||||+|+++||+++ |..||.+.+      ..+....+..--                                 
T Consensus       339 ~s~kTDV~sfGV~~~Eif~~g~~Py~g~~------~~~v~~kI~~~~---------------------------------  379 (474)
T KOG0194|consen  339 FSFKTDVWSFGVLLWEIFENGAEPYPGMK------NYEVKAKIVKNG---------------------------------  379 (474)
T ss_pred             cccccchhheeeeEEeeeccCCCCCCCCC------HHHHHHHHHhcC---------------------------------
Confidence            9999999999999999998 788998774      222222111100                                 


Q ss_pred             chhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhc
Q 026540          159 SLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ  201 (237)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  201 (237)
                             -+...+...+..+..++..|+..+|+.|+|+.++.+
T Consensus       380 -------~r~~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~  415 (474)
T KOG0194|consen  380 -------YRMPIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKK  415 (474)
T ss_pred             -------ccCCCCCCCHHHHHHHHHHhccCChhhccCHHHHHH
Confidence                   011234455788889999999999999999998776

>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]

Probab=99.85  E-value=1.6e-21  Score=162.75  Aligned_cols=158  Identities=15%  Similarity=0.184  Sum_probs=122.9

Q ss_pred             hHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCccee-cCcCcccC----cCCCcccchHHhhhc
Q 026540            4 VEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACR-ANKQFAEE----IQTRQYRAPEVILRA   78 (237)
Q Consensus         4 ~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~-~~~~~~~~----~~~~~~~~PE~~~~~   78 (237)
                      +.+..+.++.||++|++||.+.+++|||+-+.|||++.++++||+|||.++- +...+...    +-++.|+|+|.+.-+
T Consensus       635 ~t~~~vsi~tqiasgmaYLes~nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~yy~vqgr~vlpiRwmawEsillg  714 (807)
T KOG1094|consen  635 ETAPGVSICTQIASGMAYLESLNFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDYYRVQGRAVLPIRWMAWESILLG  714 (807)
T ss_pred             ccchhHHHHHHHHHHHHHHHhhchhhccccccceeecCcccEEecCcccccccccCCceeeecceeeeeeehhHHHHHhc
Confidence            4467788999999999999999999999999999999999999999999863 33332222    336789999999999


Q ss_pred             CCCchhhhhhhhhHHHHHh--cCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcccc
Q 026540           79 GYSFSVDMWSFACTAFELA--TGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLK  156 (237)
Q Consensus        79 ~~~~~~diws~g~~l~~~~--~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (237)
                      .++.++|+|++|+.+||++  +...||...+      +++..+..-+.+...+..+                        
T Consensus       715 kFttaSDvWafgvTlwE~~~~C~e~Py~~lt------~e~vven~~~~~~~~~~~~------------------------  764 (807)
T KOG1094|consen  715 KFTTASDVWAFGVTLWEVFMLCREQPYSQLT------DEQVVENAGEFFRDQGRQV------------------------  764 (807)
T ss_pred             cccchhhhhhhHHHHHHHHHHHhhCchhhhh------HHHHHHhhhhhcCCCCcce------------------------
Confidence            9999999999999999986  4667886553      3333443333332222111                        


Q ss_pred             CCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhc
Q 026540          157 FWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ  201 (237)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  201 (237)
                                ....|..++.++.+++.+|+..+-++|||++++..
T Consensus       765 ----------~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~  799 (807)
T KOG1094|consen  765 ----------VLSRPPACPQGLYELMLRCWRRESEQRPSFEQLHL  799 (807)
T ss_pred             ----------eccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHH
Confidence                      12345667888999999999999999999999864

>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]

Probab=99.85  E-value=4.7e-21  Score=153.40  Aligned_cols=153  Identities=16%  Similarity=0.148  Sum_probs=123.3

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCc-----CcccCcCCCcccchHHhh
Q 026540            2 TIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK-----QFAEEIQTRQYRAPEVIL   76 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~-----~~~~~~~~~~~~~PE~~~   76 (237)
                      +++..+.+..+-|+..|+.|+|.++++|.||-..|++|+....+|++|-.+++....     .....-.+..||++|.+.
T Consensus       392 tvtt~qlV~masQla~am~hlh~~~ViHkDiAaRNCvIdd~LqVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~  471 (563)
T KOG1024|consen  392 TVTTIQLVLMASQLAMAMEHLHNHGVIHKDIAARNCVIDDQLQVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQ  471 (563)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHhcCcccchhhhhcceehhheeEEeccchhccccCcccccccCCCCCCcccccCHHHHh
Confidence            466788999999999999999999999999999999999999999999998875432     122233467899999999


Q ss_pred             hcCCCchhhhhhhhhHHHHHhc-CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccc
Q 026540           77 RAGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRL  155 (237)
Q Consensus        77 ~~~~~~~~diws~g~~l~~~~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (237)
                      ...|+..+|+||||+++||+.+ |+.|+....      +.+....+...                               
T Consensus       472 n~~yssasDvWsfGVllWELmtlg~~PyaeID------PfEm~~ylkdG-------------------------------  514 (563)
T KOG1024|consen  472 NSHYSSASDVWSFGVLLWELMTLGKLPYAEID------PFEMEHYLKDG-------------------------------  514 (563)
T ss_pred             hhhhcchhhhHHHHHHHHHHHhcCCCCccccC------HHHHHHHHhcc-------------------------------
Confidence            9999999999999999999986 778885442      22222111100                               


Q ss_pred             cCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhc
Q 026540          156 KFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ  201 (237)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  201 (237)
                                -+...|.+|++++...+.-|+..+|++||+++|+++
T Consensus       515 ----------yRlaQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~  550 (563)
T KOG1024|consen  515 ----------YRLAQPFNCPDELFTVMACCWALLPEERPSFSQLVI  550 (563)
T ss_pred             ----------ceecCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHH
Confidence                      023457789999999999999999999999999986

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.84  E-value=5.5e-21  Score=177.40  Aligned_cols=168  Identities=13%  Similarity=0.097  Sum_probs=114.5

Q ss_pred             hhHHHHHHHHHHHHhhhhhhh---hhcCCccCCCCCccccCCCCcEEEeecCcceecCcCcccCcCCCcccchHHhhhcC
Q 026540            3 IVEKKLKRRAKRAVANISIRR---ASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAG   79 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~---~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~PE~~~~~~   79 (237)
                      ++..++.+++.+++.|+.|+|   ..+++|||+||+||+++.++..++. ++....... .....++..|+|||++.+..
T Consensus       777 l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~-~~~~~~t~~y~aPE~~~~~~  854 (968)
T PLN00113        777 LSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCT-DTKCFISSAYVAPETRETKD  854 (968)
T ss_pred             CCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-ecccccccc-CCCccccccccCcccccCCC
Confidence            456788999999999999999   6799999999999999998877765 554432211 12336788999999998888


Q ss_pred             CCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCc
Q 026540           80 YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWS  159 (237)
Q Consensus        80 ~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (237)
                      ++.++||||+|+++||+++|+.||......  ...   .....+.....        .....+.+               
T Consensus       855 ~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~--~~~---~~~~~~~~~~~--------~~~~~~~~---------------  906 (968)
T PLN00113        855 ITEKSDIYGFGLILIELLTGKSPADAEFGV--HGS---IVEWARYCYSD--------CHLDMWID---------------  906 (968)
T ss_pred             CCcccchhhHHHHHHHHHhCCCCCCcccCC--CCc---HHHHHHHhcCc--------cchhheeC---------------
Confidence            999999999999999999999998543211  011   11111100000        00000000               


Q ss_pred             hhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcC
Q 026540          160 LDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQH  202 (237)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h  202 (237)
                        ...............++.+++.+|++.||++|||++|+++.
T Consensus       907 --~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~  947 (968)
T PLN00113        907 --PSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKT  947 (968)
T ss_pred             --ccccCCCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHH
Confidence              00000111223345678899999999999999999999874

>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]

Probab=99.84  E-value=1.9e-21  Score=163.48  Aligned_cols=149  Identities=15%  Similarity=0.183  Sum_probs=120.4

Q ss_pred             HHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcCc----ccCcCCCcccchHHhhhcCCC
Q 026540            6 KKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQF----AEEIQTRQYRAPEVILRAGYS   81 (237)
Q Consensus         6 ~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~~----~~~~~~~~~~~PE~~~~~~~~   81 (237)
                      .-...|+.|+..+|+|+++...+||||-..|||+.+...+|++|||+++-.....    +...-++.||+||.+.-..++
T Consensus       491 ~tL~ly~~Qi~talaYLeSkrfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed~~yYkaS~~kLPIKWmaPESINfRrFT  570 (974)
T KOG4257|consen  491 RTLTLYCYQICTALAYLESKRFVHRDIAARNILVSSPQCVKLADFGLSRYLEDDAYYKASRGKLPIKWMAPESINFRRFT  570 (974)
T ss_pred             HHHHHHHHHHHHHHHHHHhhchhhhhhhhhheeecCcceeeecccchhhhccccchhhccccccceeecCccccchhccc
Confidence            3467899999999999999999999999999999999999999999997654321    223336789999999999999


Q ss_pred             chhhhhhhhhHHHHHh-cCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCch
Q 026540           82 FSVDMWSFACTAFELA-TGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSL  160 (237)
Q Consensus        82 ~~~diws~g~~l~~~~-~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (237)
                      .++|+|-||+.+||++ .|..||.+-.....             +|.                     ..          
T Consensus       571 tASDVWMFgVCmWEIl~lGvkPfqgvkNsDV-------------I~~---------------------iE----------  606 (974)
T KOG4257|consen  571 TASDVWMFGVCMWEILSLGVKPFQGVKNSDV-------------IGH---------------------IE----------  606 (974)
T ss_pred             chhhHHHHHHHHHHHHHhcCCccccccccce-------------EEE---------------------ec----------
Confidence            9999999999999987 48899987531100             000                     00          


Q ss_pred             hHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhc
Q 026540          161 DRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ  201 (237)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  201 (237)
                         -.++..+|+.|++.+..++.+|+.++|.+||++.|+..
T Consensus       607 ---nGeRlP~P~nCPp~LYslmskcWayeP~kRPrftei~~  644 (974)
T KOG4257|consen  607 ---NGERLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKA  644 (974)
T ss_pred             ---CCCCCCCCCCCChHHHHHHHHHhccCcccCCcHHHHHH
Confidence               11244678899999999999999999999999888654

>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.83  E-value=1.2e-20  Score=160.55  Aligned_cols=150  Identities=15%  Similarity=0.145  Sum_probs=120.9

Q ss_pred             HHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcCcccC------cCCCcccchHHhhhcCC
Q 026540            7 KLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQFAEE------IQTRQYRAPEVILRAGY   80 (237)
Q Consensus         7 ~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~~~~~------~~~~~~~~PE~~~~~~~   80 (237)
                      ..-.|+.||+.|+.||.+.+.+|||+-..|+|+-....+||+|||+.+.++.....+      .-+..|.+||.+....+
T Consensus       213 ~Lcdya~QiA~aM~YLeskrlvHRDLAARNlllasprtVKI~DFGLmRaLg~ned~Yvm~p~rkvPfAWCaPEsLrh~kF  292 (1039)
T KOG0199|consen  213 RLCDYAMQIAKAMQYLESKRLVHRDLAARNLLLASPRTVKICDFGLMRALGENEDMYVMAPQRKVPFAWCAPESLRHRKF  292 (1039)
T ss_pred             HHHHHHHHHHHHHHHHhhhhhhhhhhhhhhheecccceeeeecccceeccCCCCcceEecCCCcCcccccCHhHhccccc
Confidence            345799999999999999999999999999999999999999999998766432221      22457999999999999


Q ss_pred             CchhhhhhhhhHHHHHhc-CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCc
Q 026540           81 SFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWS  159 (237)
Q Consensus        81 ~~~~diws~g~~l~~~~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (237)
                      +.++|+|++||.+|||++ |..||.+..+      .+.+.++-                                     
T Consensus       293 ShaSDvWmyGVTiWEMFtyGEePW~G~~g------~qIL~~iD-------------------------------------  329 (1039)
T KOG0199|consen  293 SHASDVWMYGVTIWEMFTYGEEPWVGCRG------IQILKNID-------------------------------------  329 (1039)
T ss_pred             cccchhhhhhhhHHhhhccCCCCCCCCCH------HHHHHhcc-------------------------------------
Confidence            999999999999999997 6689988742      22222110                                     


Q ss_pred             hhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCC
Q 026540          160 LDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHP  203 (237)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp  203 (237)
                          ..++..-+..|+..+.+++..|+..+|+.|||+..|.+.-
T Consensus       330 ----~~erLpRPk~csedIY~imk~cWah~paDRptFsair~~~  369 (1039)
T KOG0199|consen  330 ----AGERLPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIREDL  369 (1039)
T ss_pred             ----ccccCCCCCCChHHHHHHHHHhccCCccccccHHHHHHhH
Confidence                1122334667899999999999999999999999887543

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=99.83  E-value=1.2e-20  Score=159.62  Aligned_cols=166  Identities=24%  Similarity=0.257  Sum_probs=128.8

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC---cccCcCCCcccchHHhh--
Q 026540            2 TIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ---FAEEIQTRQYRAPEVIL--   76 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~~~~PE~~~--   76 (237)
                      -|+|-|+...++..+.|++|+|+++-+|||||-.||+++..+.+|++|||.+...+..   ...++|+++|++||+..  
T Consensus       108 plselqiayvcRetl~gl~ylhs~gk~hRdiKGanilltd~gDvklaDfgvsaqitati~KrksfiGtpywmapEvaave  187 (829)
T KOG0576|consen  108 PLSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILLTDEGDVKLADFGVSAQITATIAKRKSFIGTPYWMAPEVAAVE  187 (829)
T ss_pred             cchhHHHHHHHhhhhccchhhhcCCcccccccccceeecccCceeecccCchhhhhhhhhhhhcccCCccccchhHHHHH
Confidence            3789999999999999999999999999999999999999999999999998665533   34679999999999976  


Q ss_pred             -hcCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccc
Q 026540           77 -RAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRL  155 (237)
Q Consensus        77 -~~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (237)
                       .++|...+|+|++|+.-.++..-+.|.+..      -+...+.+|....-.+|.                         
T Consensus       188 rkggynqlcdiwa~gitAiel~eLqpplfdl------hpmr~l~LmTkS~~qpp~-------------------------  236 (829)
T KOG0576|consen  188 RKGGYNQLCDIWALGITAIELGELQPPLFDL------HPMRALFLMTKSGFQPPT-------------------------  236 (829)
T ss_pred             hcccccccccccccccchhhhhhcCCccccc------chHHHHHHhhccCCCCCc-------------------------
Confidence             346999999999999888888777655433      122333333221111110                         


Q ss_pred             cCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccC
Q 026540          156 KFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNS  210 (237)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~  210 (237)
                                  ......-++.|.+|++.+|..+|++|||++.+|+|||..+-..
T Consensus       237 ------------lkDk~kws~~fh~fvK~altknpKkRptaeklL~h~fvs~~l~  279 (829)
T KOG0576|consen  237 ------------LKDKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQHPFVSQTLS  279 (829)
T ss_pred             ------------ccCCccchHHHHHHHHHHhcCCCccCCChhhheeceeeccchh
Confidence                        0011122578999999999999999999999999999987633

>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]

Probab=99.81  E-value=9.5e-20  Score=148.76  Aligned_cols=102  Identities=24%  Similarity=0.264  Sum_probs=84.7

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhh---------hcCCccCCCCCccccCCCCcEEEeecCcceecC-----cCcccCcCCCc
Q 026540            3 IVEKKLKRRAKRAVANISIRRA---------SMGGIELPKPERCLDGIDMRCKVVDFGNACRAN-----KQFAEEIQTRQ   68 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~---------~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~-----~~~~~~~~~~~   68 (237)
                      ++=..+-+++..+++||+|||.         ..|.|||||++|||+.+++++.|+|||++..+.     ......+||..
T Consensus       304 isw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLAl~~~p~~~~~d~~~qVGT~R  383 (534)
T KOG3653|consen  304 ISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGLALRLEPGKPQGDTHGQVGTRR  383 (534)
T ss_pred             ccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccceeEEecCCCCCcchhhhhhhhh
Confidence            4445678899999999999997         567899999999999999999999999996654     12234799999


Q ss_pred             ccchHHhhhc-CCC-----chhhhhhhhhHHHHHhcCCcccC
Q 026540           69 YRAPEVILRA-GYS-----FSVDMWSFACTAFELATGDMLFA  104 (237)
Q Consensus        69 ~~~PE~~~~~-~~~-----~~~diws~g~~l~~~~~g~~~f~  104 (237)
                      |||||++.+. ++.     ...||||+|.++||++++-..++
T Consensus       384 YMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~  425 (534)
T KOG3653|consen  384 YMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDAD  425 (534)
T ss_pred             hcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhccccc
Confidence            9999999876 344     35899999999999998765554

>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]

Probab=99.81  E-value=1.9e-20  Score=143.42  Aligned_cols=104  Identities=23%  Similarity=0.220  Sum_probs=89.5

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccC-CC-CcEEEeecCcceecCcCcccCcCCCcccchHHhhhc-
Q 026540            2 TIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDG-ID-MRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRA-   78 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~-~~-~~~kl~dfg~~~~~~~~~~~~~~~~~~~~PE~~~~~-   78 (237)
                      |+-|...++++.|+++||.|+|+.+++|||||.+||||- .+ ..+||+|||.++..+......-....|.+||.+... 
T Consensus       117 GigE~~~K~v~~ql~SAi~fMHsknlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~tV~~~~~~~~y~~pe~~~~~~  196 (378)
T KOG1345|consen  117 GIGEANTKKVFAQLLSAIEFMHSKNLVHRDLKAENILIFDADFYRVKLCDFGLTRKVGTTVKYLEYVNNYHAPELCDTVV  196 (378)
T ss_pred             cccHHHHHHHHHHHHHHHHHhhccchhhcccccceEEEecCCccEEEeeecccccccCceehhhhhhcccCCcHHHhhcc
Confidence            677899999999999999999999999999999999993 33 589999999998777665555556788999988743 


Q ss_pred             ----CCCchhhhhhhhhHHHHHhcCCcccCC
Q 026540           79 ----GYSFSVDMWSFACTAFELATGDMLFAP  105 (237)
Q Consensus        79 ----~~~~~~diws~g~~l~~~~~g~~~f~~  105 (237)
                          ...+..|+|.||++++.+++|..||..
T Consensus       197 ne~~~~~ps~D~WqfGIi~f~cltG~~PWQk  227 (378)
T KOG1345|consen  197 NEKLVVNPSTDIWQFGIIFFYCLTGKFPWQK  227 (378)
T ss_pred             ccceEecccccchheeeeeeeeecCCCcchh
Confidence                356889999999999999999999973

>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.79  E-value=3.9e-19  Score=144.29  Aligned_cols=97  Identities=20%  Similarity=0.287  Sum_probs=82.7

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhh--------hcCCccCCCCCccccCCCCcEEEeecCcceecCc-------CcccCcCC
Q 026540            2 TIVEKKLKRRAKRAVANISIRRA--------SMGGIELPKPERCLDGIDMRCKVVDFGNACRANK-------QFAEEIQT   66 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~--------~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~-------~~~~~~~~   66 (237)
                      +++...+.+.+..++.||+|||.        ..|.|||||+.||||..++.+-|+|+|++.....       ..+.++||
T Consensus       304 tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLGLAv~h~~~t~~idi~~N~rVGT  383 (513)
T KOG2052|consen  304 TVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSDTDTIDIPPNPRVGT  383 (513)
T ss_pred             cCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeeceeeEEecccCCcccCCCCCccce
Confidence            46778899999999999999997        4677999999999999999999999999965542       34577999


Q ss_pred             CcccchHHhhhc----CCC--chhhhhhhhhHHHHHhc
Q 026540           67 RQYRAPEVILRA----GYS--FSVDMWSFACTAFELAT   98 (237)
Q Consensus        67 ~~~~~PE~~~~~----~~~--~~~diws~g~~l~~~~~   98 (237)
                      ..|||||++...    .+.  ..+||||||.++||+..
T Consensus       384 KRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiar  421 (513)
T KOG2052|consen  384 KRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIAR  421 (513)
T ss_pred             eeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHH
Confidence            999999999754    232  35999999999999865

>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]

Probab=99.77  E-value=1.1e-19  Score=151.78  Aligned_cols=102  Identities=23%  Similarity=0.244  Sum_probs=93.8

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCccee-cCcCcccCcCCCcccchHHhhhcCC-
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACR-ANKQFAEEIQTRQYRAPEVILRAGY-   80 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~-~~~~~~~~~~~~~~~~PE~~~~~~~-   80 (237)
                      ++|.+|..|++|+++|+.++|..+|+|||||=+|++++.+|.+|++|||.+.. -+.+....+||..|.|||++.+..| 
T Consensus       667 m~E~eAk~IFkQV~agi~hlh~~~ivhrdikdenvivd~~g~~klidfgsaa~~ksgpfd~f~gtv~~aapevl~g~~y~  746 (772)
T KOG1152|consen  667 MDEPEAKLIFKQVVAGIKHLHDQGIVHRDIKDENVIVDSNGFVKLIDFGSAAYTKSGPFDVFVGTVDYAAPEVLGGEKYL  746 (772)
T ss_pred             cchHHHHHHHHHHHhccccccccCceecccccccEEEecCCeEEEeeccchhhhcCCCcceeeeeccccchhhhCCCccC
Confidence            68999999999999999999999999999999999999999999999998753 3356778899999999999998886 


Q ss_pred             CchhhhhhhhhHHHHHhcCCcccC
Q 026540           81 SFSVDMWSFACTAFELATGDMLFA  104 (237)
Q Consensus        81 ~~~~diws~g~~l~~~~~g~~~f~  104 (237)
                      +.+.|||++|+++|.++....||+
T Consensus       747 gk~qdiwalgillytivykenpyy  770 (772)
T KOG1152|consen  747 GKPQDIWALGILLYTIVYKENPYY  770 (772)
T ss_pred             CCcchhhhhhheeeEEEeccCCCc
Confidence            788999999999999999888886

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=99.76  E-value=4.7e-18  Score=129.66  Aligned_cols=122  Identities=28%  Similarity=0.402  Sum_probs=106.6

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCC-CCcEEEeecCcceecCcC---cccCcCCCcccchHHhhhc
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGI-DMRCKVVDFGNACRANKQ---FAEEIQTRQYRAPEVILRA   78 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~-~~~~kl~dfg~~~~~~~~---~~~~~~~~~~~~PE~~~~~   78 (237)
                      +++.++..++.+++.++.++|..++.|+|++|.||+++. ++.++++||+.+......   .....+...|.+||.+...
T Consensus        89 ~~~~~~~~~~~~l~~~l~~lh~~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~  168 (215)
T cd00180          89 LSEDEILRILLQILEGLEYLHSNGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKSLLKTIVGTPAYMAPEVLLGK  168 (215)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcchhhcccCCCCccChhHhccc
Confidence            577888999999999999999999999999999999999 899999999988665443   3344567889999999877


Q ss_pred             -CCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccC
Q 026540           79 -GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKF  157 (237)
Q Consensus        79 -~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (237)
                       ..+...|+|++|++++++                                                             
T Consensus       169 ~~~~~~~D~~~lg~~~~~l-------------------------------------------------------------  187 (215)
T cd00180         169 GYYSEKSDIWSLGVILYEL-------------------------------------------------------------  187 (215)
T ss_pred             CCCCchhhhHHHHHHHHHH-------------------------------------------------------------
Confidence             678899999999999988                                                             


Q ss_pred             CchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCC
Q 026540          158 WSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHP  203 (237)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp  203 (237)
                                        ..+.+++..|+..+|.+||++.++++++
T Consensus       188 ------------------~~~~~~l~~~l~~~p~~R~~~~~l~~~~  215 (215)
T cd00180         188 ------------------PELKDLIRKMLQKDPEKRPSAKEILEHL  215 (215)
T ss_pred             ------------------HHHHHHHHHHhhCCcccCcCHHHHhhCC
Confidence                              1356889999999999999999999875

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]

Probab=99.74  E-value=1.1e-17  Score=144.83  Aligned_cols=152  Identities=17%  Similarity=0.181  Sum_probs=121.5

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC---cccC--cCCCcccchHHhhh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ---FAEE--IQTRQYRAPEVILR   77 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~---~~~~--~~~~~~~~PE~~~~   77 (237)
                      |-.+..+.+..||+.||.|+|....+||||-..|+|+.....+|+.|||+++.....   +...  .-.+.|++-|.+..
T Consensus       795 igsq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~~ey~~~~gK~pikwmale~i~~  874 (1177)
T KOG1025|consen  795 IGSQDLLNWCYQIAKGMKYLEEQRLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDEKEYSAPGGKVPIKWMALESIRI  874 (1177)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhheeecCCCeEEEEecchhhccCcccccccccccccCcHHHHHHHhhc
Confidence            456788999999999999999999999999999999999999999999999765422   2222  22678999999999


Q ss_pred             cCCCchhhhhhhhhHHHHHhc-CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcccc
Q 026540           78 AGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLK  156 (237)
Q Consensus        78 ~~~~~~~diws~g~~l~~~~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (237)
                      ..|+.++||||+||++||++| |..|+.+....       .+-.+++                                 
T Consensus       875 ~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~-------eI~dlle---------------------------------  914 (1177)
T KOG1025|consen  875 RKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAE-------EIPDLLE---------------------------------  914 (1177)
T ss_pred             cCCCchhhhhhhhhhHHHHHhcCCCccCCCCHH-------HhhHHHh---------------------------------
Confidence            999999999999999999987 78888776311       1100000                                 


Q ss_pred             CCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhc
Q 026540          157 FWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ  201 (237)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  201 (237)
                             ..++...|..++.++.-++.+||..|+..||+++++..
T Consensus       915 -------~geRLsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~  952 (1177)
T KOG1025|consen  915 -------KGERLSQPPICTIDVYMVMVKCWMIDADSRPTFKELAE  952 (1177)
T ss_pred             -------ccccCCCCCCccHHHHHHHHHHhccCcccCccHHHHHH
Confidence                   11233456778888999999999999999999998765

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=99.72  E-value=4e-18  Score=150.99  Aligned_cols=151  Identities=25%  Similarity=0.265  Sum_probs=119.2

Q ss_pred             HhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecC----c--------------CcccCcCCCcccchHHhhh
Q 026540           16 VANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRAN----K--------------QFAEEIQTRQYRAPEVILR   77 (237)
Q Consensus        16 l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~----~--------------~~~~~~~~~~~~~PE~~~~   77 (237)
                      +-++.|+|+.+|.|||+||+|.+|..-|++|+.|||++..-.    .              .....+|++.|.|||++..
T Consensus       153 vla~Eylh~ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilr  232 (1205)
T KOG0606|consen  153 VLAVEYLHSYGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILR  232 (1205)
T ss_pred             hHHhHhhccCCeecCCCCCCcceeeecccccccchhhhhhhhhhccchhhhcchHHHHHHhhhccccCCccccChhhhhh
Confidence            677899999999999999999999999999999999884211    0              1123488999999999999


Q ss_pred             cCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccC
Q 026540           78 AGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKF  157 (237)
Q Consensus        78 ~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (237)
                      .+|+.++|.|++|+++|+.+.|..||++.+      .+..+...+......+                            
T Consensus       233 qgygkpvdwwamGiIlyeFLVgcvpffGdt------peelfg~visd~i~wp----------------------------  278 (1205)
T KOG0606|consen  233 QGYGKPVDWWAMGIILYEFLVGCVPFFGDT------PEELFGQVISDDIEWP----------------------------  278 (1205)
T ss_pred             hccCCCccHHHHHHHHHHHheeeeeccCCC------HHHHHhhhhhhhcccc----------------------------
Confidence            999999999999999999999999999886      2222222211110000                            


Q ss_pred             CchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCC---CHHHHhcCCCcCcccCC
Q 026540          158 WSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRP---TAQQCLQHPWLSLRNST  211 (237)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~---t~~ell~hp~f~~~~~~  211 (237)
                                 .-....++++.+++..+|+.+|..|.   .+-++.+|+||...+++
T Consensus       279 -----------E~dea~p~Ea~dli~~LL~qnp~~Rlgt~ga~evk~h~ff~~LDw~  324 (1205)
T KOG0606|consen  279 -----------EEDEALPPEAQDLIEQLLRQNPLCRLGTGGALEVKQHGFFQLLDWK  324 (1205)
T ss_pred             -----------ccCcCCCHHHHHHHHHHHHhChHhhcccchhhhhhhccceeecccc
Confidence                       01233467889999999999999997   46789999999999887

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.71  E-value=5e-18  Score=143.36  Aligned_cols=156  Identities=24%  Similarity=0.261  Sum_probs=129.9

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcCcccCcCCCcccchHHhhhcCCCc
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSF   82 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~   82 (237)
                      +.+...+.+...++=++.++|..++++||+|++||+++.+|.+++.|||+++..-..- ..+|+..||+||+..  +...
T Consensus        94 f~~~~~~~~~aelaLald~lh~l~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~-~~cgt~eymApEI~~--gh~~  170 (612)
T KOG0603|consen   94 FDELDVAFYLAELALALDHLHKLGIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEK-IACGTYEYRAPEIIN--GHLS  170 (612)
T ss_pred             hHHHHHHHHHHHHHHHHhhcchhHHHHhcccccceeecccCccccCCchhhhHhHhhh-hcccchhhhhhHhhh--ccCC
Confidence            4566778888999999999999999999999999999999999999999986543221 128899999999997  6677


Q ss_pred             hhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCchhH
Q 026540           83 SVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDR  162 (237)
Q Consensus        83 ~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (237)
                      .+|.||+|++.+++++|..||...          .                                          ...
T Consensus       171 a~D~ws~gvl~felltg~~pf~~~----------~------------------------------------------~~~  198 (612)
T KOG0603|consen  171 AADWWSFGVLAFELLTGTLPFGGD----------T------------------------------------------MKR  198 (612)
T ss_pred             cccchhhhhhHHHHhhCCCCCchH----------H------------------------------------------HHH
Confidence            899999999999999999999642          1                                          122


Q ss_pred             HhhhhcCCCHHhHHHHHHHHHhccccCCCCCCC-----HHHHhcCCCcCcccCCcc
Q 026540          163 LLVDKYRFSETDAREFAEFLVPLLDFTPEKRPT-----AQQCLQHPWLSLRNSTRD  213 (237)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t-----~~ell~hp~f~~~~~~~~  213 (237)
                      ++.....++...+..+.+++..++..+|.+|..     +.|+++|+||...++...
T Consensus       199 Il~~~~~~p~~l~~~a~~~~~~l~~r~p~nrLg~~~~~~~eik~h~f~~~i~~~~l  254 (612)
T KOG0603|consen  199 ILKAELEMPRELSAEARSLFRQLFKRNPENRLGAGPDGVDEIKQHEFFQSIDWNEL  254 (612)
T ss_pred             HhhhccCCchhhhHHHHHHHHHHHhhCHHHHhccCcchhHHHhccchheeeeHhhH
Confidence            233355678888999999999999999999986     579999999998887743

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=99.66  E-value=2e-16  Score=125.40  Aligned_cols=96  Identities=21%  Similarity=0.230  Sum_probs=75.0

Q ss_pred             HHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcCcccCcCCCcccchHHhhhc--------CCCc
Q 026540           11 RAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRA--------GYSF   82 (237)
Q Consensus        11 ~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~PE~~~~~--------~~~~   82 (237)
                      +..|++...+++|..+++|.||||+|++++.+|.+.|+||+.....++.......+..|.+||.....        .++.
T Consensus       150 lT~Q~I~lvA~Lh~~GlVHgdi~~~nfll~~~G~v~Lg~F~~~~r~g~~~~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~  229 (288)
T PF14531_consen  150 LTVQMIRLVANLHSYGLVHGDIKPENFLLDQDGGVFLGDFSSLVRAGTRYRCSEFPVAFTPPELESCAGQFGQNNAPYTF  229 (288)
T ss_dssp             HHHHHHHHHHHHHHTTEEEST-SGGGEEE-TTS-EEE--GGGEEETTEEEEGGGS-TTTS-HHHHHHHTSCHHSEEEE-H
T ss_pred             HHHHHHHHHHHHhhcceEecccceeeEEEcCCCCEEEcChHHHeecCceeeccCCCcccCChhhhhhhcccCcccceeee
Confidence            34888999999999999999999999999999999999999887777665544556789999988763        3678


Q ss_pred             hhhhhhhhhHHHHHhcCCcccCCC
Q 026540           83 SVDMWSFACTAFELATGDMLFAPK  106 (237)
Q Consensus        83 ~~diws~g~~l~~~~~g~~~f~~~  106 (237)
                      +.|.|++|+++|.++++..||...
T Consensus       230 ~~DaW~LG~~ly~lWC~~lPf~~~  253 (288)
T PF14531_consen  230 ATDAWQLGITLYSLWCGRLPFGLS  253 (288)
T ss_dssp             HHHHHHHHHHHHHHHHSS-STCCC
T ss_pred             ccCHHHHHHHHHHHHHccCCCCCC
Confidence            899999999999999999999755

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=99.65  E-value=4.2e-16  Score=120.60  Aligned_cols=103  Identities=27%  Similarity=0.332  Sum_probs=89.7

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcCc----ccCcCCCcccchHHh-hh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQF----AEEIQTRQYRAPEVI-LR   77 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~~----~~~~~~~~~~~PE~~-~~   77 (237)
                      +++.....++.+++.+++++|..++.|+|++|+||+++.++.++++|||.+.......    ....++..|++||.+ ..
T Consensus        95 ~~~~~~~~~~~~l~~~l~~lh~~~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~  174 (225)
T smart00221       95 LSEEEARFYLRQILEALEYLHSLGIVHRDLKPENILLGMDGLVKLADFGLARFIHRDLAALLKTVKGTPFYLAPEVLLGG  174 (225)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeeCceeeEecCcccccccceeccCCcCCHhHhcCC
Confidence            5678889999999999999999999999999999999999999999999886554322    344667789999998 45


Q ss_pred             cCCCchhhhhhhhhHHHHHhcCCcccCC
Q 026540           78 AGYSFSVDMWSFACTAFELATGDMLFAP  105 (237)
Q Consensus        78 ~~~~~~~diws~g~~l~~~~~g~~~f~~  105 (237)
                      ..++.++|+|++|++++++++|+.||..
T Consensus       175 ~~~~~~~Dv~~lG~~~~~l~~g~~pf~~  202 (225)
T smart00221      175 KGYGEAVDIWSLGVILYELLWGPEPFSG  202 (225)
T ss_pred             CCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence            5677899999999999999999999965

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]

Probab=99.60  E-value=2.6e-15  Score=133.88  Aligned_cols=152  Identities=22%  Similarity=0.183  Sum_probs=105.5

Q ss_pred             hHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecC----c--CcccC----cCCCcccchH
Q 026540            4 VEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRAN----K--QFAEE----IQTRQYRAPE   73 (237)
Q Consensus         4 ~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~----~--~~~~~----~~~~~~~~PE   73 (237)
                      +.-+-+=|+-|++.|+..+|..++.|.|||.+||||..=-++.|+||..-...-    .  .++.+    ...-.|.|||
T Consensus       118 ~~iEKkWiaFQLL~al~qcH~~gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeDNPadf~fFFDTSrRRtCYiAPE  197 (1431)
T KOG1240|consen  118 VLIEKKWIAFQLLKALSQCHKLGVCHGDIKSENILITSWNWLYLTDFASFKPTYLPEDNPADFTFFFDTSRRRTCYIAPE  197 (1431)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHcCccccccccceEEEeeechhhhhcccccCCccCCCCCcccceEEEecCCceeeecChH
Confidence            344556789999999999999999999999999999988899999997542211    1  11111    2234799999


Q ss_pred             Hhhhc----------C-CCchhhhhhhhhHHHHHhc-CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchh
Q 026540           74 VILRA----------G-YSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKD  141 (237)
Q Consensus        74 ~~~~~----------~-~~~~~diws~g~~l~~~~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  141 (237)
                      .+...          + .+++.||||+||+++|+++ |+++|.-          .++..-  ..|               
T Consensus       198 RFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~L----------SQL~aY--r~~---------------  250 (1431)
T KOG1240|consen  198 RFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTL----------SQLLAY--RSG---------------  250 (1431)
T ss_pred             hhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccH----------HHHHhH--hcc---------------
Confidence            99852          2 5788999999999999987 6777731          111100  000               


Q ss_pred             hhcccCccchhccccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcC
Q 026540          142 YFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQH  202 (237)
Q Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h  202 (237)
                                    .....+..+      ..-....++++|..|++.||++|.+|++.|+.
T Consensus       251 --------------~~~~~e~~L------e~Ied~~~Rnlil~Mi~rdPs~RlSAedyL~~  291 (1431)
T KOG1240|consen  251 --------------NADDPEQLL------EKIEDVSLRNLILSMIQRDPSKRLSAEDYLQK  291 (1431)
T ss_pred             --------------CccCHHHHH------HhCcCccHHHHHHHHHccCchhccCHHHHHHh
Confidence                          000001111      01113468899999999999999999999983

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=99.59  E-value=1.2e-14  Score=117.86  Aligned_cols=173  Identities=23%  Similarity=0.211  Sum_probs=124.4

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCC-cEEEeecCcceecCc---------CcccCcCCCcccc
Q 026540            2 TIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDM-RCKVVDFGNACRANK---------QFAEEIQTRQYRA   71 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~-~~kl~dfg~~~~~~~---------~~~~~~~~~~~~~   71 (237)
                      .+.+..+..++.|++.++.++|..+++|||+||+||+++..+ .++++|||.+.....         ......++..|++
T Consensus        97 ~~~~~~~~~~~~~~~~~l~~~H~~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~t~~~~~  176 (384)
T COG0515          97 PLSESEALFILAQILSALEYLHSKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMA  176 (384)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeecCCCCeEEEeccCcceecCCCCccccccccccccccccccCC
Confidence            467889999999999999999999999999999999999988 799999998864432         2356688999999


Q ss_pred             hHHhhh---cCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCc
Q 026540           72 PEVILR---AGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGD  148 (237)
Q Consensus        72 PE~~~~---~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (237)
                      ||.+.+   .......|+|++|+++++++.|..||......   ................             ..  .. 
T Consensus       177 pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~---~~~~~~~~~~~~~~~~-------------~~--~~-  237 (384)
T COG0515         177 PEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNS---SATSQTLKIILELPTP-------------SL--AS-  237 (384)
T ss_pred             HHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCcc---ccHHHHHHHHHhcCCc-------------cc--cc-
Confidence            999988   46788999999999999999999887654310   0011111111111100             00  00 


Q ss_pred             cchhccccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCccc
Q 026540          149 LKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRN  209 (237)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~  209 (237)
                                .....      ........+.+++..++..+|..|.+..+...+++.....
T Consensus       238 ----------~~~~~------~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~  282 (384)
T COG0515         238 ----------PLSPS------NPELISKAASDLLKKLLAKDPKNRLSSSSDLSHDLLAHLK  282 (384)
T ss_pred             ----------ccCcc------ccchhhHHHHHHHHHHHhcCchhcCCHHHHhhchHhhCcc
Confidence                      00000      0012235678999999999999999999988886666443

>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]

Probab=99.55  E-value=3.3e-15  Score=124.21  Aligned_cols=90  Identities=21%  Similarity=0.192  Sum_probs=79.9

Q ss_pred             HHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecC---------cCcccCcCCCcccchHHhh
Q 026540            6 KKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRAN---------KQFAEEIQTRQYRAPEVIL   76 (237)
Q Consensus         6 ~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~---------~~~~~~~~~~~~~~PE~~~   76 (237)
                      ..++..+.|+..++.|   .+-+|+|+||.||++..+..+||.|||+.....         ...+..+|+..|++||.+.
T Consensus       359 s~~~~~~~q~~~~~~y---k~~ihrdlkp~nif~~~d~q~kIgDFgl~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~  435 (516)
T KOG1033|consen  359 SLMLDIFKQIAPAVEY---KGLIHRDLKPSNIFFSDDDQLKIGDFGLVTSQDKDETVAPAAASHTQQVGTLLYMSPEQIR  435 (516)
T ss_pred             hHHHHHHHhhccchhh---ccchhhhccccccccccchhhhhhhhhheeecccCCcccchhhhhhhcccccccCCHHHHh
Confidence            4577889999999999   788999999999999999999999999874432         2355678999999999999


Q ss_pred             hcCCCchhhhhhhhhHHHHHhc
Q 026540           77 RAGYSFSVDMWSFACTAFELAT   98 (237)
Q Consensus        77 ~~~~~~~~diws~g~~l~~~~~   98 (237)
                      +..|+.++|||+||+++++++.
T Consensus       436 g~~y~~kvdIyaLGlil~EL~~  457 (516)
T KOG1033|consen  436 GQQYSEKVDIYALGLILAELLI  457 (516)
T ss_pred             hhhhhhhcchhhHHHHHHHHHH
Confidence            9999999999999999999987

>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]

Probab=99.55  E-value=2.3e-14  Score=115.76  Aligned_cols=151  Identities=14%  Similarity=0.106  Sum_probs=107.4

Q ss_pred             HHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCC--CC--cEEEeecCcceec---------CcCcccCcCCCcccch
Q 026540            6 KKLKRRAKRAVANISIRRASMGGIELPKPERCLDGI--DM--RCKVVDFGNACRA---------NKQFAEEIQTRQYRAP   72 (237)
Q Consensus         6 ~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~--~~--~~kl~dfg~~~~~---------~~~~~~~~~~~~~~~P   72 (237)
                      -..+-++.|++++..|+|.+++.|||+|++|||+.-  ++  .+.++|||-+.-.         ....-..-|+-..++|
T Consensus       341 r~~~~~laQlLEav~hL~~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAP  420 (598)
T KOG4158|consen  341 RTGRVILAQLLEAVTHLHKHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAP  420 (598)
T ss_pred             HHHHHHHHHHHHHHHHHHHccchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecch
Confidence            345668899999999999999999999999999943  32  5789999965211         1122233556778999


Q ss_pred             HHhhhcC-----CC-chhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhccc
Q 026540           73 EVILRAG-----YS-FSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRH  146 (237)
Q Consensus        73 E~~~~~~-----~~-~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  146 (237)
                      |+....+     .+ .++|.|+.|.+-||++....||+....-.. +.                                
T Consensus       421 Ei~ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L-~~--------------------------------  467 (598)
T KOG4158|consen  421 EIATAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLL-DT--------------------------------  467 (598)
T ss_pred             hhhhcCCCCceeeccchhhhhhhhhhHHHHhccCCcccccchhee-ch--------------------------------
Confidence            9986432     11 369999999999999999999987431000 00                                


Q ss_pred             CccchhccccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCH---HHHhcC
Q 026540          147 GDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTA---QQCLQH  202 (237)
Q Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~---~ell~h  202 (237)
                                   ..........+++.+++.+.+++..+|+.||++|+++   ..+|+-
T Consensus       468 -------------r~Yqe~qLPalp~~vpp~~rqlV~~lL~r~pskRvsp~iAANvl~L  513 (598)
T KOG4158|consen  468 -------------RTYQESQLPALPSRVPPVARQLVFDLLKRDPSKRVSPNIAANVLNL  513 (598)
T ss_pred             -------------hhhhhhhCCCCcccCChHHHHHHHHHhcCCccccCCccHHHhHHHH
Confidence                         0000111234567788999999999999999999984   455553

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=99.51  E-value=2.8e-14  Score=110.10  Aligned_cols=148  Identities=18%  Similarity=0.171  Sum_probs=107.4

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCc--cCCCCCccccCCCCcEEEe--ecCcceecCcCcccCcCCCcccchHHhhhc
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGI--ELPKPERCLDGIDMRCKVV--DFGNACRANKQFAEEIQTRQYRAPEVILRA   78 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h--~d~kp~Nili~~~~~~kl~--dfg~~~~~~~~~~~~~~~~~~~~PE~~~~~   78 (237)
                      +...||++++..+++|++|+|+..-..  -.+.+..++|+.+.+.+|.  |-.+++...    .+..++.|++||.+...
T Consensus       286 vd~sqav~faldiargmaflhslep~ipr~~lns~hvmidedltarismad~kfsfqe~----gr~y~pawmspealqrk  361 (448)
T KOG0195|consen  286 VDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDEDLTARISMADTKFSFQEV----GRAYSPAWMSPEALQRK  361 (448)
T ss_pred             EecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEecchhhhheecccceeeeecc----ccccCcccCCHHHHhcC
Confidence            456799999999999999999975432  2358889999998766654  444433221    22347899999999876


Q ss_pred             CC---CchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccc
Q 026540           79 GY---SFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRL  155 (237)
Q Consensus        79 ~~---~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (237)
                      +-   -..+|+|||++++||+.++..||.....-      +.-..                                   
T Consensus       362 ped~n~raadmwsfaillwel~trevpfadlspm------ecgmk-----------------------------------  400 (448)
T KOG0195|consen  362 PEDLNIRAADMWSFAILLWELNTREVPFADLSPM------ECGMK-----------------------------------  400 (448)
T ss_pred             chhcchhhhhHHHHHHHHHHhhccccccccCCch------hhhhh-----------------------------------
Confidence            53   24699999999999999999999765311      10000                                   


Q ss_pred             cCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHh
Q 026540          156 KFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCL  200 (237)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell  200 (237)
                           -.+..-+.+.|.+.+..+-.|+..|++.||.+||.+.+++
T Consensus       401 -----ialeglrv~ippgis~hm~klm~icmnedpgkrpkfdmiv  440 (448)
T KOG0195|consen  401 -----IALEGLRVHIPPGISRHMNKLMNICMNEDPGKRPKFDMIV  440 (448)
T ss_pred             -----hhhccccccCCCCccHHHHHHHHHHhcCCCCcCCCcceeh
Confidence                 0011113456778889999999999999999999988764

>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.43  E-value=7.5e-13  Score=108.58  Aligned_cols=104  Identities=19%  Similarity=0.087  Sum_probs=88.3

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCC-----CcEEEeecCcce--ecCcC-----------cccCc
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGID-----MRCKVVDFGNAC--RANKQ-----------FAEEI   64 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~-----~~~kl~dfg~~~--~~~~~-----------~~~~~   64 (237)
                      ++..-+..++.|++.+|.++|+.+++||||||.|+.++..     ..+.+.|||+++  .+...           .....
T Consensus       119 fs~~T~l~ia~q~l~~l~~lH~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar~~~~~~~~~~~~~~~r~~~~~~r  198 (322)
T KOG1164|consen  119 FSRKTVLRIAIQNLNALEDLHSKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLARRFKYVGDSGGNLRPPRPQKGLFR  198 (322)
T ss_pred             cCHhHHHHHHHHHHHHHHHHHhcCcccCCcCHHHeeecCCCCcccceEEEEecCCCccccccCCCCcccccCCCCccCCC
Confidence            5667789999999999999999999999999999999865     468999999997  32110           11235


Q ss_pred             CCCcccchHHhhhcCCCchhhhhhhhhHHHHHhcCCcccCCC
Q 026540           65 QTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPK  106 (237)
Q Consensus        65 ~~~~~~~PE~~~~~~~~~~~diws~g~~l~~~~~g~~~f~~~  106 (237)
                      ||..|.++....+...+..-|+||++.++.++..|..||...
T Consensus       199 GT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~  240 (322)
T KOG1164|consen  199 GTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEAL  240 (322)
T ss_pred             CccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccc
Confidence            889999999888888999999999999999999999999654

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.33  E-value=3e-13  Score=118.52  Aligned_cols=163  Identities=19%  Similarity=0.187  Sum_probs=123.2

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhh-hhcCCccCCCCCccccCCCC-cEEEeecCcceecCc------CcccCcC-CCcccch
Q 026540            2 TIVEKKLKRRAKRAVANISIRR-ASMGGIELPKPERCLDGIDM-RCKVVDFGNACRANK------QFAEEIQ-TRQYRAP   72 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~-~~~~~h~d~kp~Nili~~~~-~~kl~dfg~~~~~~~------~~~~~~~-~~~~~~P   72 (237)
                      +..+..+..++.|+..++.|+| ..++.|||+||+|.+++.++ .++++|||++..+..      ......| ++.|.+|
T Consensus       119 ~~~~~~~~~~~~ql~s~l~~~H~~~~~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~~~~g~~~~~~~~~g~s~~y~a~  198 (601)
T KOG0590|consen  119 GTSSSSASRYLPQLNSGLSYLHPENGVTHRDIKPSNSLLDESGSALKIADFGLATAYRNKNGAERSLKDRCGSSPPYGAP  198 (601)
T ss_pred             CCCCcchhhhhhhhccCccccCcccccccCCCCCccchhccCCCcccCCCchhhccccccCCcceeeecccCCCCCCCCc
Confidence            3455667889999999999999 99999999999999999998 999999999854432      2334577 8999999


Q ss_pred             HHhhhcC-CCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccch
Q 026540           73 EVILRAG-YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKR  151 (237)
Q Consensus        73 E~~~~~~-~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (237)
                      |...+.. ..+..|+||.|+++..+++|..|+.-.....                             ..++.-... + 
T Consensus       199 E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~-----------------------------~~~~~~~~~-~-  247 (601)
T KOG0590|consen  199 EHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKD-----------------------------GRYSSWKSN-K-  247 (601)
T ss_pred             ccccchhhcCCCcccccccccccccccCCCCcccccccc-----------------------------ccceeeccc-c-
Confidence            9998854 4778999999999999999998886442100                             000000000 0 


Q ss_pred             hccccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCc
Q 026540          152 IRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSL  207 (237)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~  207 (237)
                                  ................+++.+++..+|..|.+.+++..++|+..
T Consensus       248 ------------~~~~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~d~~~~~  291 (601)
T KOG0590|consen  248 ------------GRFTQLPWNSISDQAHDLLHKILKENPSNRLSIEELKLDNWLSS  291 (601)
T ss_pred             ------------cccccCccccCChhhhhcccccccCCchhccccccccccccccc
Confidence                        00001122334567789999999999999999999999999998

>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]

Probab=99.31  E-value=3.7e-12  Score=107.52  Aligned_cols=158  Identities=17%  Similarity=0.151  Sum_probs=109.0

Q ss_pred             HHHHHHHHHHhhhhhhhhhcC-CccCCCCCccccCCCCcEEEeecCcceecCc-----CcccCcCCCcccchHHhhhc--
Q 026540            7 KLKRRAKRAVANISIRRASMG-GIELPKPERCLDGIDMRCKVVDFGNACRANK-----QFAEEIQTRQYRAPEVILRA--   78 (237)
Q Consensus         7 ~~~~~~~~~l~~l~~~~~~~~-~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~-----~~~~~~~~~~~~~PE~~~~~--   78 (237)
                      =...+++.++.||.|+|..-+ .|..+++.|++++..-.+|+.|||+......     ......-...|.+||.+...  
T Consensus        49 F~~s~~rdi~~Gl~ylh~s~i~~hg~l~s~nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~  128 (484)
T KOG1023|consen   49 FILSFIRDISKGLAYLHNSPIGYHGALKSSNCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALS  128 (484)
T ss_pred             HHHHHHHHHHHHHHHHhcCcceeeeeeccccceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhccccc
Confidence            345678899999999999888 6999999999999999999999998754421     11111224579999999864  


Q ss_pred             -C----CCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhc
Q 026540           79 -G----YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIR  153 (237)
Q Consensus        79 -~----~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (237)
                       .    .+.+.|+||+|+++++++..+.||.....     ..+..+.+..+.+....                       
T Consensus       129 ~~~~~~~~~~gdiYs~~ii~~ei~~r~~~~~~~~~-----~~~~~eii~~~~~~~~~-----------------------  180 (484)
T KOG1023|consen  129 QSLESALTQKGDIYSFGIIMYEILFRSGPFDLRNL-----VEDPDEIILRVKKGGSN-----------------------  180 (484)
T ss_pred             ccccccccccCCeehHHHHHHHHHhccCccccccc-----cCChHHHHHHHHhcCCC-----------------------
Confidence             1    35679999999999999999999976431     11112222222110000                       


Q ss_pred             cccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhc
Q 026540          154 RLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ  201 (237)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  201 (237)
                        ..+|...       ...+..+.+..++..|+..+|++||+++++-.
T Consensus       181 --~~rP~i~-------~~~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~  219 (484)
T KOG1023|consen  181 --PFRPSIE-------LLNELPPELLLLVARCWEEIPEKRPSIEQIRS  219 (484)
T ss_pred             --CcCcchh-------hhhhcchHHHHHHHHhcccChhhCccHHHHHh
Confidence              0000000       00133447889999999999999999998764

>PRK12274 serine/threonine protein kinase; Provisional

Probab=99.24  E-value=2.9e-11  Score=91.74  Aligned_cols=98  Identities=15%  Similarity=0.060  Sum_probs=72.8

Q ss_pred             HHHHHHHHhhhhhhhhhcCCccCC-CCCccccCCCCcEEEeecCcceecCcCcc----------------cCcCCCcccc
Q 026540            9 KRRAKRAVANISIRRASMGGIELP-KPERCLDGIDMRCKVVDFGNACRANKQFA----------------EEIQTRQYRA   71 (237)
Q Consensus         9 ~~~~~~~l~~l~~~~~~~~~h~d~-kp~Nili~~~~~~kl~dfg~~~~~~~~~~----------------~~~~~~~~~~   71 (237)
                      ..++.|++.+|.++|..+++|||| ||+|||++.++.++|+|||++........                ....++.++.
T Consensus        94 ~~~~~qi~~~L~~lH~~GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~~~r~L~~rDl~~llk~~~~y~~~~l~  173 (218)
T PRK12274         94 LAYFRAARRLLQQLHRCGVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRARWMRLLAREDLRHLLKHKRMYCPAALT  173 (218)
T ss_pred             HHHHHHHHHHHHHHHHCcCccCCCCCcceEEEcCCCCEEEEECCCceecCCcchHHHHHHHHHHHHHHHHHHhcCCCCCC
Confidence            467889999999999999999999 79999999999999999999864332211                1133566677


Q ss_pred             hHHhhhc-CCCchhhhh-hhhhHHHHHhcCCcccCCC
Q 026540           72 PEVILRA-GYSFSVDMW-SFACTAFELATGDMLFAPK  106 (237)
Q Consensus        72 PE~~~~~-~~~~~~diw-s~g~~l~~~~~g~~~f~~~  106 (237)
                      |+...-. ..+-..-+| +.|+-+|.++|+..+..+.
T Consensus       174 ~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~  210 (218)
T PRK12274        174 PVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWED  210 (218)
T ss_pred             HHHHhhhccchhHHHHHHHhcchHHHHHhccCCcccc
Confidence            7544332 334334455 8899999999998766544

>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.24  E-value=2.3e-11  Score=92.58  Aligned_cols=125  Identities=17%  Similarity=0.104  Sum_probs=92.3

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCC---cEEEeecCcceecCcCc----------ccCcCCCcc
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDM---RCKVVDFGNACRANKQF----------AEEIQTRQY   69 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~---~~kl~dfg~~~~~~~~~----------~~~~~~~~~   69 (237)
                      ++.+..+-.+-|++.-+.|+|..+.+||||||+|.|.+-+.   .+.++|||++..+....          ....||..|
T Consensus       108 ftmkTvLMLaDQml~RiEyvH~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d~~t~~HIpyre~r~ltGTaRY  187 (341)
T KOG1163|consen  108 FTMKTVLMLADQMLSRIEYVHLRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRDIRTRQHIPYREDRNLTGTARY  187 (341)
T ss_pred             hhHHhHHHHHHHHHHHHHHHHhhccccccCCccceeeccccccceEEEEeccchhhhccccccccCccccCCccceeeee
Confidence            45666777889999999999999999999999999998654   57899999996654221          123667777


Q ss_pred             cchHHhhhcCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCH
Q 026540           70 RAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPR  130 (237)
Q Consensus        70 ~~PE~~~~~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~  130 (237)
                      .+--...+..-+..-|+=|+|.++.+.-.|..||.+....   ....-.+.+.+..-..+.
T Consensus       188 ASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~---tk~QKyEkI~EkK~s~~i  245 (341)
T KOG1163|consen  188 ASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAA---TKKQKYEKISEKKMSTPI  245 (341)
T ss_pred             hhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchh---hHHHHHHHHHHhhcCCCH
Confidence            7766555555677789999999999999999999887533   233344455444433333

>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.21  E-value=2.3e-11  Score=96.51  Aligned_cols=105  Identities=17%  Similarity=0.089  Sum_probs=89.0

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCC-----cEEEeecCcceecCcCc----------ccCcCCC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDM-----RCKVVDFGNACRANKQF----------AEEIQTR   67 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~-----~~kl~dfg~~~~~~~~~----------~~~~~~~   67 (237)
                      ++-|..+-+|.|++.-+.++|.++.++|||||+|+||+..+     .+.++|||++..+..+.          ....||.
T Consensus       121 FSvKTV~miA~Qmi~rie~vH~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrDp~TkqHIPYrE~KSLsGTA  200 (449)
T KOG1165|consen  121 FSVKTVAMIAKQMITRIEYVHEKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRDPKTKQHIPYREHKSLSGTA  200 (449)
T ss_pred             ccHHhHHHHHHHHHHHHHHHHhcceeecccCccceeecCCCCCCCceEEEEeccchhhhcCccccccCccccccccccce
Confidence            56778889999999999999999999999999999997533     57999999997654322          2336788


Q ss_pred             cccchHHhhhcCCCchhhhhhhhhHHHHHhcCCcccCCCC
Q 026540           68 QYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKS  107 (237)
Q Consensus        68 ~~~~PE~~~~~~~~~~~diws~g~~l~~~~~g~~~f~~~~  107 (237)
                      .||+--...+..-+..-|+=|+|=++++.+.|..||.+..
T Consensus       201 RYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLK  240 (449)
T KOG1165|consen  201 RYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLK  240 (449)
T ss_pred             eeeEeeccccchhhhhhhHHHhhhhhhhhccCCCcccccc
Confidence            8998877777777888999999999999999999998764

>PRK09188 serine/threonine protein kinase; Provisional

Probab=99.17  E-value=2.5e-11  Score=100.29  Aligned_cols=83  Identities=17%  Similarity=0.176  Sum_probs=63.4

Q ss_pred             HHHHHHHHhhhhhhhhhcCCccCC-CCCccccCCCCcEEEeecCcceecCcC-----------cccCcCCCcccchHHhh
Q 026540            9 KRRAKRAVANISIRRASMGGIELP-KPERCLDGIDMRCKVVDFGNACRANKQ-----------FAEEIQTRQYRAPEVIL   76 (237)
Q Consensus         9 ~~~~~~~l~~l~~~~~~~~~h~d~-kp~Nili~~~~~~kl~dfg~~~~~~~~-----------~~~~~~~~~~~~PE~~~   76 (237)
                      ..++.+++.+|.|+|..+++|||| ||+|||++.++.++|+|||++......           .....++..|.+||.+.
T Consensus       114 ~~~~~~i~~aL~~lH~~gIiHrDL~KP~NILv~~~~~ikLiDFGlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~  193 (365)
T PRK09188        114 PAWFRSAHRALRDLHRAGITHNDLAKPQNWLMGPDGEAAVIDFQLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALT  193 (365)
T ss_pred             HHHHHHHHHHHHHHHHCCCeeCCCCCcceEEEcCCCCEEEEECccceecccCcchhhhhhhhhhhhhhccCccCCcccCC
Confidence            568899999999999999999999 999999998899999999999754322           12335566788998886


Q ss_pred             hcC------CCchhhhh-hhhh
Q 026540           77 RAG------YSFSVDMW-SFAC   91 (237)
Q Consensus        77 ~~~------~~~~~diw-s~g~   91 (237)
                      ...      .+..+|-| ..|=
T Consensus       194 ~~~~~~~~~~~~~~dgW~~TGD  215 (365)
T PRK09188        194 PRERKILARKSLPSRIWLATGK  215 (365)
T ss_pred             hhhhccccccccccCcEEeCCC
Confidence            432      23446666 3343

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=99.13  E-value=4.7e-11  Score=90.48  Aligned_cols=53  Identities=11%  Similarity=0.014  Sum_probs=47.6

Q ss_pred             hhHHHHHHHHHHHHhhhhhh-hhhcCCccCCCCCccccCCCCcEEEeecCcceec
Q 026540            3 IVEKKLKRRAKRAVANISIR-RASMGGIELPKPERCLDGIDMRCKVVDFGNACRA   56 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~-~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~   56 (237)
                      +++.++..++.|++.+|.++ |..+++||||||+||+++ ++.++++|||++...
T Consensus       114 ~~~~~~~~i~~qi~~~L~~l~H~~giiHrDlkP~NIli~-~~~v~LiDFG~a~~~  167 (190)
T cd05147         114 LSESKARELYLQVIQIMRILYQDCRLVHADLSEYNLLYH-DGKLYIIDVSQSVEH  167 (190)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEE-CCcEEEEEccccccC
Confidence            56788999999999999999 799999999999999998 478999999998543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=99.09  E-value=1e-10  Score=88.73  Aligned_cols=54  Identities=11%  Similarity=-0.018  Sum_probs=49.1

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhh-hcCCccCCCCCccccCCCCcEEEeecCcceecC
Q 026540            3 IVEKKLKRRAKRAVANISIRRA-SMGGIELPKPERCLDGIDMRCKVVDFGNACRAN   57 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~-~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~   57 (237)
                      +++.++..++.++++++.++|. .+++||||||+||+++ ++.++++|||++....
T Consensus       114 ~~~~~~~~i~~~l~~~l~~lH~~~givHrDlkP~NIll~-~~~~~liDFG~a~~~~  168 (190)
T cd05145         114 LEEEEAEELYEQVVEQMRRLYQEAGLVHGDLSEYNILYH-DGKPYIIDVSQAVELD  168 (190)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHhCCEecCCCChhhEEEE-CCCEEEEEcccceecC
Confidence            4567889999999999999999 9999999999999998 7899999999986543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=99.05  E-value=7.8e-11  Score=91.01  Aligned_cols=77  Identities=9%  Similarity=0.037  Sum_probs=58.8

Q ss_pred             HHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcCcccCcCCCcccchHHhhhcCCCchhhhhhhh
Q 026540           11 RAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFA   90 (237)
Q Consensus        11 ~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~diws~g   90 (237)
                      .+.+++.++..+|..++.|+|+||+||+++.++ ++++|||..........         .........+..++|+|++|
T Consensus       140 ~~~~i~~~l~~lH~~gi~H~Dikp~Nili~~~g-i~liDfg~~~~~~e~~a---------~d~~vler~y~~~~di~~lg  209 (232)
T PRK10359        140 VKAKIKASIESLHQHGMVSGDPHKGNFIVSKNG-LRIIDLSGKRCTAQRKA---------KDRIDLERHYGIKNEIKDLG  209 (232)
T ss_pred             HHHHHHHHHHHHHHcCCccCCCChHHEEEeCCC-EEEEECCCcccccchhh---------HHHHHHHhHhccccccccee
Confidence            466899999999999999999999999999988 99999997643322111         11134455567789999999


Q ss_pred             hHHHHHh
Q 026540           91 CTAFELA   97 (237)
Q Consensus        91 ~~l~~~~   97 (237)
                      +.+....
T Consensus       210 ~~~~~~~  216 (232)
T PRK10359        210 YYLLIYK  216 (232)
T ss_pred             EeehHHH
Confidence            8876543

>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=98.97  E-value=6.5e-10  Score=100.64  Aligned_cols=99  Identities=15%  Similarity=0.125  Sum_probs=83.9

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCC-------CCcEEEeecCcceecC-----cCcccCcCCCccc
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGI-------DMRCKVVDFGNACRAN-----KQFAEEIQTRQYR   70 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~-------~~~~kl~dfg~~~~~~-----~~~~~~~~~~~~~   70 (237)
                      ++|--..-+..|++.-+.++|..+|+|.||||+|.|+..       +..++|+|||.+..+.     ........+-.+.
T Consensus       791 m~e~lv~~~~~qml~ive~lH~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~siDm~lfp~~~~F~~~~~td~f~  870 (974)
T KOG1166|consen  791 MDEYLVMFFSCQMLRIVEHLHAMGIIHGDIKPDNFLLRREICADSDSKGLYLIDFGRSIDMKLFPDGTKFKAVWHTDLFD  870 (974)
T ss_pred             CCchhhhHHHHHHHHHHHHHHhcceecccCCcceeEeecccCCCCcccceEEEecccceeeeEcCCCcEEeeeeccccch
Confidence            345566788999999999999999999999999999943       4578999999886543     3444556788899


Q ss_pred             chHHhhhcCCCchhhhhhhhhHHHHHhcCCc
Q 026540           71 APEVILRAGYSFSVDMWSFACTAFELATGDM  101 (237)
Q Consensus        71 ~PE~~~~~~~~~~~diws~g~~l~~~~~g~~  101 (237)
                      ++|+..+.+|+..+|.|.++.+++.|+.|+.
T Consensus       871 C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y  901 (974)
T KOG1166|consen  871 CIEMREGRPWTYQIDYFGLAATVHVMLFGKY  901 (974)
T ss_pred             hHHHhcCCCCchhhhhHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999864

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=98.95  E-value=4.2e-10  Score=100.97  Aligned_cols=165  Identities=20%  Similarity=0.215  Sum_probs=122.7

Q ss_pred             hHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecC--------------------------
Q 026540            4 VEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRAN--------------------------   57 (237)
Q Consensus         4 ~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~--------------------------   57 (237)
                      ++.-++.+...+..++.++|+..+.|||++|.|+++..++..++.+|+.....+                          
T Consensus       902 saepaRs~i~~~vqs~e~L~s~~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~~~p~~~~sg~~~~~~~~~~~~~~~~  981 (1205)
T KOG0606|consen  902 SAEPARSPILERVQSLESLHSSLRKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGLIPPTTDLSGPSSSGTPRRLSRSERR  981 (1205)
T ss_pred             ccccccchhHHHHhhhhccccchhhcccccccchhhcccCCcccCccccccccccccCcCCcccccccCccccccccccc
Confidence            344556677788889999999999999999999999999999999997321100                          


Q ss_pred             ----c----CcccCcCCCcccchHHhhhcCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCC
Q 026540           58 ----K----QFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMP  129 (237)
Q Consensus        58 ----~----~~~~~~~~~~~~~PE~~~~~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (237)
                          .    ......+++.|.+||...+......+|.|+.|+++++.++|..||...+.+.      ..+.+    ... 
T Consensus       982 ~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~na~tpq~------~f~ni----~~~- 1050 (1205)
T KOG0606|consen  982 PQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFNAETPQQ------IFENI----LNR- 1050 (1205)
T ss_pred             cccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCCCCcchhh------hhhcc----ccC-
Confidence                0    0112366889999999999999999999999999999999999998765321      11100    000 


Q ss_pred             HHHHhcCCCchhhhcccCccchhccccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHH---HHhcCCCcC
Q 026540          130 RKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQ---QCLQHPWLS  206 (237)
Q Consensus       130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~---ell~hp~f~  206 (237)
                                                        .......+...+.+..+++.+.|..+|.+|..+.   +.-.|+||.
T Consensus      1051 ----------------------------------~~~~p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~~~~e~k~~~~~~ 1096 (1205)
T KOG0606|consen 1051 ----------------------------------DIPWPEGPEEGSYEAQDLINRLLTEEPTQRLGAKGAAEVKGHPFFQ 1096 (1205)
T ss_pred             ----------------------------------CCCCCCCccccChhhhhhhhhhhccCchhccCcccccccccCCccC
Confidence                                              0001112334567889999999999999999887   888999999


Q ss_pred             cccCCcc
Q 026540          207 LRNSTRD  213 (237)
Q Consensus       207 ~~~~~~~  213 (237)
                      ..++...
T Consensus      1097 ~~~~~~l 1103 (1205)
T KOG0606|consen 1097 DVDWENL 1103 (1205)
T ss_pred             CCCcccc
Confidence            8876554

>smart00090 RIO RIO-like kinase

Probab=98.81  E-value=3.5e-09  Score=83.04  Aligned_cols=52  Identities=8%  Similarity=-0.112  Sum_probs=46.6

Q ss_pred             hHHHHHHHHHHHHhhhhhhhhhc-CCccCCCCCccccCCCCcEEEeecCcceec
Q 026540            4 VEKKLKRRAKRAVANISIRRASM-GGIELPKPERCLDGIDMRCKVVDFGNACRA   56 (237)
Q Consensus         4 ~~~~~~~~~~~~l~~l~~~~~~~-~~h~d~kp~Nili~~~~~~kl~dfg~~~~~   56 (237)
                      .+.++..++.|++.+++++|..+ ++|+|+||+||+++ ++.++++|||.+...
T Consensus       146 ~~~~~~~i~~qi~~~l~~LH~~g~iiH~Dikp~NIli~-~~~i~LiDFg~a~~~  198 (237)
T smart00090      146 EEEEEFELYDDILEEMRKLYKEGELVHGDLSEYNILVH-DGKVVIIDVSQSVEL  198 (237)
T ss_pred             chHHHHHHHHHHHHHHHHHHhcCCEEeCCCChhhEEEE-CCCEEEEEChhhhcc
Confidence            44567899999999999999999 99999999999999 788999999987543

>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]

Probab=98.69  E-value=1.6e-07  Score=77.57  Aligned_cols=100  Identities=14%  Similarity=0.109  Sum_probs=83.2

Q ss_pred             HHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcc--eecCcCcccCcCCCcccchHHhhhc-----CC
Q 026540            8 LKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNA--CRANKQFAEEIQTRQYRAPEVILRA-----GY   80 (237)
Q Consensus         8 ~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~--~~~~~~~~~~~~~~~~~~PE~~~~~-----~~   80 (237)
                      +++.++.++.+.+.+|..|....|++++|+|++.++.+.+.|-..-  +..+..+.+.+|...|++||...-+     ..
T Consensus       119 llrvaRnlA~aFA~lH~~Gh~vGDVn~~~~lVsd~~~V~LVdsDsfqi~~ng~~~~cpVg~~eftPPElQ~~~sf~g~~r  198 (637)
T COG4248         119 LLRVARNLASAFATLHEHGHVVGDVNQNSFLVSDDSKVVLVDSDSFQINANGTLHLCPVGVSEFTPPELQTLPSFVGFER  198 (637)
T ss_pred             HHHHHHHHHHHHHHHHhcCCcccccCccceeeecCceEEEEcccceeeccCCceEecccCccccCCHHHhccccccccCC
Confidence            5788999999999999999999999999999999999999975532  2334556678899999999987622     34


Q ss_pred             CchhhhhhhhhHHHHHhcC-CcccCCCC
Q 026540           81 SFSVDMWSFACTAFELATG-DMLFAPKS  107 (237)
Q Consensus        81 ~~~~diws~g~~l~~~~~g-~~~f~~~~  107 (237)
                      +...|.|.+|+++++++.| +.||.+..
T Consensus       199 ~~~hD~FGLavLiF~lL~ggrHPysGI~  226 (637)
T COG4248         199 TANHDNFGLAVLIFHLLFGGRHPYSGIP  226 (637)
T ss_pred             CccccchhHHHHHHHHHhcCCCCCCccc
Confidence            5678999999999999876 78998764

>KOG2137 consensus Protein kinase [Signal transduction mechanisms]

Probab=98.69  E-value=6.8e-09  Score=89.83  Aligned_cols=156  Identities=19%  Similarity=0.215  Sum_probs=109.0

Q ss_pred             HHHHHHhhhhhhhhh-cCCccCCCCCccccCCCCcEEEeecCcceecCc-------CcccC-----cCCCcccchHHhhh
Q 026540           11 RAKRAVANISIRRAS-MGGIELPKPERCLDGIDMRCKVVDFGNACRANK-------QFAEE-----IQTRQYRAPEVILR   77 (237)
Q Consensus        11 ~~~~~l~~l~~~~~~-~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~-------~~~~~-----~~~~~~~~PE~~~~   77 (237)
                      -+.++.+|+.++|-. ..+|+++.|++|.++.++..|++.|+.+.....       .+...     .....|.+||.+..
T Consensus       104 nl~~v~dgl~flh~sAk~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~  183 (700)
T KOG2137|consen  104 NLGNVADGLAFLHRSAKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLG  183 (700)
T ss_pred             hhhcccchhhhhccCcceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhcc
Confidence            345666888998864 557999999999999999999999987632221       11111     22457999999998


Q ss_pred             cCCCchhhhhhhhhHHHHHh-cCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcccc
Q 026540           78 AGYSFSVDMWSFACTAFELA-TGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLK  156 (237)
Q Consensus        78 ~~~~~~~diws~g~~l~~~~-~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (237)
                      ...+.++|++|+|+.+|-+. .|+..+...+...+-.        .+                       ..        
T Consensus       184 ~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~--------~~-----------------------~~--------  224 (700)
T KOG2137|consen  184 TTNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYS--------FS-----------------------RN--------  224 (700)
T ss_pred             ccccccccceeeeeEEEEEecCCcchhhccCCcchhh--------hh-----------------------hc--------
Confidence            77889999999999999888 5655555442110000        00                       00        


Q ss_pred             CCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccC
Q 026540          157 FWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNS  210 (237)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~  210 (237)
                         ....  .......+++.++++-+.++|..++..||++.+++..+||.+..-
T Consensus       225 ---~~~~--~~~~~s~~~p~el~~~l~k~l~~~~~~rp~~~~l~~~~ff~D~~~  273 (700)
T KOG2137|consen  225 ---LLNA--GAFGYSNNLPSELRESLKKLLNGDSAVRPTLDLLLSIPFFSDPGL  273 (700)
T ss_pred             ---cccc--ccccccccCcHHHHHHHHHHhcCCcccCcchhhhhcccccCCchh
Confidence               0000  011223456788999999999999999999999999999997643

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=98.66  E-value=3.2e-08  Score=75.50  Aligned_cols=52  Identities=8%  Similarity=-0.082  Sum_probs=46.3

Q ss_pred             HHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecC
Q 026540            6 KKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRAN   57 (237)
Q Consensus         6 ~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~   57 (237)
                      ..+..++.+++.++.++|..+++|+||||+||+++.++.++|+|||.+....
T Consensus       125 ~~~~~~~~~i~~~l~~lh~~gi~H~Dl~p~Nill~~~~~~~liDfg~~~~~~  176 (198)
T cd05144         125 EDPEEVLDEILEEIVKAYKHGIIHGDLSEFNILVDDDEKIYIIDWPQMVSTD  176 (198)
T ss_pred             ccHHHHHHHHHHHHHHHHHCCCCcCCCCcccEEEcCCCcEEEEECCccccCC
Confidence            3456788999999999999999999999999999999999999999885443

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>cd05119 RIO RIO kinase family, catalytic domain

Probab=98.64  E-value=2.8e-08  Score=74.96  Aligned_cols=51  Identities=8%  Similarity=-0.087  Sum_probs=46.5

Q ss_pred             HHHHHHHHHHHhhhhhhhh-hcCCccCCCCCccccCCCCcEEEeecCcceecC
Q 026540            6 KKLKRRAKRAVANISIRRA-SMGGIELPKPERCLDGIDMRCKVVDFGNACRAN   57 (237)
Q Consensus         6 ~~~~~~~~~~l~~l~~~~~-~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~   57 (237)
                      .++.+++.+++.++.++|. .+++|+|+||+||+++ ++.++++|||.+....
T Consensus       114 ~~~~~~~~~~~~~l~~lh~~~~ivH~Dl~p~Nili~-~~~~~liDfg~a~~~~  165 (187)
T cd05119         114 EDPEELYDQILELMRKLYREAGLVHGDLSEYNILVD-DGKVYIIDVPQAVEID  165 (187)
T ss_pred             ccHHHHHHHHHHHHHHHhhccCcCcCCCChhhEEEE-CCcEEEEECccccccc
Confidence            5678999999999999999 9999999999999999 8899999999885443

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=98.64  E-value=4.7e-08  Score=83.27  Aligned_cols=158  Identities=18%  Similarity=0.191  Sum_probs=111.2

Q ss_pred             hhHHHHHHHHHHHHh----hhhhhhhhcCCccCCCCCccccCCC-CcEEEeecCcceecCcCc--------ccCcCCCcc
Q 026540            3 IVEKKLKRRAKRAVA----NISIRRASMGGIELPKPERCLDGID-MRCKVVDFGNACRANKQF--------AEEIQTRQY   69 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~----~l~~~~~~~~~h~d~kp~Nili~~~-~~~kl~dfg~~~~~~~~~--------~~~~~~~~~   69 (237)
                      +.++.+..++.+...    |++++|+.++.|.|+||.||++..+ ..+++.|||+....+...        ....+...|
T Consensus       215 ~p~~~l~~~~~~~~~~~~~al~~~hs~~~~~~~~kp~~i~~~~~~~s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y  294 (524)
T KOG0601|consen  215 LPDNLLWNSLRDWLSRDVTALSHLHSNNIVHDDLKPANIFTTSDWTSCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIY  294 (524)
T ss_pred             CCchhhhhHHhhhhhcccccccccCCCcccccccchhheecccccceeecCCcceeEEccCCccccceeeeecCCCCceE
Confidence            346677788888888    9999999999999999999999998 899999999875544211        111456679


Q ss_pred             cchHHhhhcCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCcc
Q 026540           70 RAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDL  149 (237)
Q Consensus        70 ~~PE~~~~~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (237)
                      ++||... +-++...|++++|.++.+..++..+.......+                         +.+....+      
T Consensus       295 ~~ke~~~-~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~-------------------------W~~~r~~~------  342 (524)
T KOG0601|consen  295 AAKELLN-GLATFASDIFSLGEVILEAILGSHLPSVGKNSS-------------------------WSQLRQGY------  342 (524)
T ss_pred             eChhhhc-cccchHhhhcchhhhhHhhHhhcccccCCCCCC-------------------------cccccccc------
Confidence            9999874 445778999999999999988876554331000                         00000000      


Q ss_pred             chhccccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcc
Q 026540          150 KRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLR  208 (237)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~  208 (237)
                                    ++..  +-...+..+...+..|++.+|..|+++..++.+++....
T Consensus       343 --------------ip~e--~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~s~  385 (524)
T KOG0601|consen  343 --------------IPLE--FCEGGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIHSK  385 (524)
T ss_pred             --------------Cchh--hhcCcchhhhhHHHHhcCcchhhhhHHHHHhccccccch
Confidence                          0000  111123344457889999999999999999999887743

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=98.63  E-value=3.4e-08  Score=77.55  Aligned_cols=45  Identities=11%  Similarity=-0.121  Sum_probs=41.3

Q ss_pred             HHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCccee
Q 026540           11 RAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACR   55 (237)
Q Consensus        11 ~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~   55 (237)
                      .+.+++.++.++|..++.|+|+||.|||++.++.++++|||.+..
T Consensus       147 ~~~~i~~~l~~lH~~GI~HrDlkp~NILv~~~~~v~LIDfg~~~~  191 (239)
T PRK01723        147 QWQAIGQLIARFHDAGVYHADLNAHNILLDPDGKFWLIDFDRGEL  191 (239)
T ss_pred             HHHHHHHHHHHHHHCCCCCCCCCchhEEEcCCCCEEEEECCCccc
Confidence            467899999999999999999999999999988999999998743

>PRK10345 hypothetical protein; Provisional

Probab=98.58  E-value=3.6e-08  Score=75.70  Aligned_cols=43  Identities=12%  Similarity=-0.069  Sum_probs=36.5

Q ss_pred             HHHHHHHHhhh-hhhhhhcCCccCCCCCccccCC----CCcEEEeecC
Q 026540            9 KRRAKRAVANI-SIRRASMGGIELPKPERCLDGI----DMRCKVVDFG   51 (237)
Q Consensus         9 ~~~~~~~l~~l-~~~~~~~~~h~d~kp~Nili~~----~~~~kl~dfg   51 (237)
                      +.++.+++.++ .|+|..+|+||||||+|||++.    +..++|+|++
T Consensus       107 ~~~~~~~L~~l~~yLh~~~IvhrDlKp~NILl~~~~~~~~~~~LiDg~  154 (210)
T PRK10345        107 VAQLRQLLKKLKRYLLDNRIVTMELKPQNILCQRISESEVIPVVCDNI  154 (210)
T ss_pred             HHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEeccCCCCCcEEEEECC
Confidence            35678888787 8999999999999999999974    3479999954

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=98.55  E-value=4.2e-08  Score=83.54  Aligned_cols=155  Identities=16%  Similarity=0.065  Sum_probs=107.5

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCC-CcEEEeecCcceecCcCcccCcC-CCcc-cchHHhhhc
Q 026540            2 TIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGID-MRCKVVDFGNACRANKQFAEEIQ-TRQY-RAPEVILRA   78 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~-~~~kl~dfg~~~~~~~~~~~~~~-~~~~-~~PE~~~~~   78 (237)
                      .+.|....+...|++.+++++|++...|+|+||+||++..+ +..++.||+....+......... +..| .++......
T Consensus       362 ~~d~~~~~~~~~q~~~~l~~i~s~~~~~~d~~psni~i~~~~~~~~~~~~~~~t~~~~~~~~~~~~~r~~p~~~~~~e~~  441 (524)
T KOG0601|consen  362 MLDEDPRLRLTAQILTALNVIHSKLFVHLDVKPSNILISNDGFFSKLGDFGCWTRLAFSSGVFHHIDRLYPIAEILLEDY  441 (524)
T ss_pred             hcCcchhhhhHHHHHhccccccchhhhcccccccceeeccchhhhhccccccccccceecccccccccccccchhhcccc
Confidence            35677888999999999999999999999999999999886 78899999877432211111111 2333 345445556


Q ss_pred             CCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCC
Q 026540           79 GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFW  158 (237)
Q Consensus        79 ~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (237)
                      .+..++|++++|..+.+.+++...-....         +.                                        
T Consensus       442 ~~~~~~~~~sl~~~~~e~~~~~~ls~~~~---------~~----------------------------------------  472 (524)
T KOG0601|consen  442 PHLSKADIFSLGLSVDEAITGSPLSESGV---------QS----------------------------------------  472 (524)
T ss_pred             ccccccccccccccccccccCcccCcccc---------cc----------------------------------------
Confidence            78899999999999999998864322111         00                                        


Q ss_pred             chhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCc
Q 026540          159 SLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSL  207 (237)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~  207 (237)
                        ..+....+.........+..+...+...++..|+.+.++..|.=|..
T Consensus       473 --~~i~~~~~p~~~~~~~~~q~~~kv~~~~~~~~~~l~~~l~~~~~~~~  519 (524)
T KOG0601|consen  473 --LTIRSGDTPNLPGLKLQLQVLLKVMINPDRKRRPSAVELSLHSEFYR  519 (524)
T ss_pred             --eeeecccccCCCchHHhhhhhhhhhcCCccccchhhhhhcccchhhh
Confidence              00011111122233467778888999999999999999988876553

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=98.38  E-value=2.5e-07  Score=81.13  Aligned_cols=47  Identities=11%  Similarity=-0.061  Sum_probs=43.1

Q ss_pred             HHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCccee
Q 026540            8 LKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACR   55 (237)
Q Consensus         8 ~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~   55 (237)
                      ...++.+++.+|.++|..+++|||+||+||++ .++.++++|||++..
T Consensus       430 ~~~~~~~i~~~L~~lH~~giiHrDlkp~NILl-~~~~~~liDFGla~~  476 (535)
T PRK09605        430 NPELVRKVGEIVAKLHKAGIVHGDLTTSNFIV-RDDRLYLIDFGLGKY  476 (535)
T ss_pred             HHHHHHHHHHHHHHHHhCCCccCCCChHHEEE-ECCcEEEEeCccccc
Confidence            56789999999999999999999999999999 577899999998854

>PRK14879 serine/threonine protein kinase; Provisional

Probab=98.37  E-value=4.4e-07  Score=69.78  Aligned_cols=48  Identities=8%  Similarity=-0.117  Sum_probs=43.5

Q ss_pred             HHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCccee
Q 026540            7 KLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACR   55 (237)
Q Consensus         7 ~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~   55 (237)
                      +...++.+++.+|.++|..+++|+|++|.||+++ ++.++++|||.+..
T Consensus        96 ~~~~i~~~i~~~l~~lH~~~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~  143 (211)
T PRK14879         96 EELELSREIGRLVGKLHSAGIIHGDLTTSNMILS-GGKIYLIDFGLAEF  143 (211)
T ss_pred             HHHHHHHHHHHHHHHHHhCCcccCCCCcccEEEE-CCCEEEEECCcccC
Confidence            4568899999999999999999999999999999 78899999998754

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=98.30  E-value=5.6e-07  Score=68.56  Aligned_cols=45  Identities=9%  Similarity=-0.088  Sum_probs=42.0

Q ss_pred             HHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCccee
Q 026540           10 RRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACR   55 (237)
Q Consensus        10 ~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~   55 (237)
                      .++.+++.+|.++|..+++|+|++|.||+++ ++.++++|||.+..
T Consensus        94 ~~~~~i~~~l~~lH~~gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~  138 (199)
T TIGR03724        94 ELLREIGRLVGKLHKAGIVHGDLTTSNIIVR-DDKLYLIDFGLGKY  138 (199)
T ss_pred             HHHHHHHHHHHHHHHCCeecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence            7899999999999999999999999999999 78999999998754

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>KOG1266 consensus Protein kinase [Signal transduction mechanisms]

Probab=98.20  E-value=3.2e-06  Score=67.74  Aligned_cols=157  Identities=15%  Similarity=0.117  Sum_probs=100.5

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhhh--cCCccCCCCCccccCCCCcEEEeecCcceecC---c----CcccCcCCCcccch
Q 026540            2 TIVEKKLKRRAKRAVANISIRRAS--MGGIELPKPERCLDGIDMRCKVVDFGNACRAN---K----QFAEEIQTRQYRAP   72 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~~--~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~---~----~~~~~~~~~~~~~P   72 (237)
                      .+..+.-.+++-||+.||.|||+-  -++|.++--.-|++..++-+|+.--.-.....   .    ......+.++|.+|
T Consensus       172 a~~~~~wkkw~tqIlsal~yLhs~~PpiihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~  251 (458)
T KOG1266|consen  172 ALFQKAWKKWCTQILSALSYLHSCDPPIIHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAP  251 (458)
T ss_pred             hhhHHHHHHHHHHHHhhhhhhhccCCccccCCcchhheeecCCceEEecccCccccchhhhhhhHhhhhccccCCccccC
Confidence            356778889999999999999985  47899998899999988888876432211100   0    01112335677888


Q ss_pred             HHhhhcCCCchhhhhhhhhHHHHHhcCCcc-cCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccch
Q 026540           73 EVILRAGYSFSVDMWSFACTAFELATGDML-FAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKR  151 (237)
Q Consensus        73 E~~~~~~~~~~~diws~g~~l~~~~~g~~~-f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (237)
                      +.-...+...++|||++|..-.+|..+..- -.+.+      .....+.+.+..                          
T Consensus       252 ~sg~~tn~~~a~dIy~fgmcAlemailEiq~tnseS------~~~~ee~ia~~i--------------------------  299 (458)
T KOG1266|consen  252 ESGTTTNTTGASDIYKFGMCALEMAILEIQSTNSES------KVEVEENIANVI--------------------------  299 (458)
T ss_pred             CcCcccccccchhhhhhhHHHHHHHHheeccCCCcc------eeehhhhhhhhe--------------------------
Confidence            765555677889999999888888766431 11110      000001110000                          


Q ss_pred             hccccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCccc
Q 026540          152 IRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRN  209 (237)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~  209 (237)
                                  +    ..   ...--.+++.+||+-.|..||++..++.||..-...
T Consensus       300 ------------~----~l---en~lqr~~i~kcl~~eP~~rp~ar~llfHpllfeVh  338 (458)
T KOG1266|consen  300 ------------I----GL---ENGLQRGSITKCLEGEPNGRPDARLLLFHPLLFEVH  338 (458)
T ss_pred             ------------e----ec---cCccccCcCcccccCCCCCCcchhhhhcCceeeecc
Confidence                        0    00   001124688999999999999999999999766544

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=98.10  E-value=3.5e-06  Score=63.83  Aligned_cols=52  Identities=6%  Similarity=-0.087  Sum_probs=44.6

Q ss_pred             hHHHHHHHHHHHHhhhhhh-hhhcCCccCCCCCccccCCCCcEEEeecCcceec
Q 026540            4 VEKKLKRRAKRAVANISIR-RASMGGIELPKPERCLDGIDMRCKVVDFGNACRA   56 (237)
Q Consensus         4 ~~~~~~~~~~~~l~~l~~~-~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~   56 (237)
                      +++++..+..+++++|..+ |..+++|+|+++.||++.. +.+.++|||.+...
T Consensus       122 ~~~~~~~i~~~i~~~l~~l~H~~glVHGDLs~~NIL~~~-~~v~iIDF~qav~~  174 (197)
T cd05146         122 NDEEMKNAYYQVLSMMKQLYKECNLVHADLSEYNMLWHD-GKVWFIDVSQSVEP  174 (197)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEEC-CcEEEEECCCceeC
Confidence            4556778889999999988 8999999999999999974 67999999987554

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=97.92  E-value=1.2e-05  Score=57.82  Aligned_cols=49  Identities=10%  Similarity=-0.038  Sum_probs=40.8

Q ss_pred             HHHHHHHHHHHhhhhhhhhh---cCCccCCCCCccccCCCCcEEEeecCcce
Q 026540            6 KKLKRRAKRAVANISIRRAS---MGGIELPKPERCLDGIDMRCKVVDFGNAC   54 (237)
Q Consensus         6 ~~~~~~~~~~l~~l~~~~~~---~~~h~d~kp~Nili~~~~~~kl~dfg~~~   54 (237)
                      .....++.+++.++..+|..   ++.|+|++|.||+++..+.++++||+.+.
T Consensus        86 ~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~  137 (155)
T cd05120          86 EEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAG  137 (155)
T ss_pred             HHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEeccccc
Confidence            34456677788888888875   58999999999999998899999999764

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>cd05151 ChoK Choline Kinase (ChoK)

Probab=97.88  E-value=1.5e-05  Score=58.96  Aligned_cols=45  Identities=16%  Similarity=0.013  Sum_probs=38.9

Q ss_pred             HHHHHHHHhhhhhhhhhcC-----CccCCCCCccccCCCCcEEEeecCcce
Q 026540            9 KRRAKRAVANISIRRASMG-----GIELPKPERCLDGIDMRCKVVDFGNAC   54 (237)
Q Consensus         9 ~~~~~~~l~~l~~~~~~~~-----~h~d~kp~Nili~~~~~~kl~dfg~~~   54 (237)
                      ..++.+++++|..+|..+.     +|+|++|.||+++ ++.++++||+.+.
T Consensus        86 ~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~  135 (170)
T cd05151          86 PENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAG  135 (170)
T ss_pred             HHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEeccccc
Confidence            3567788999999999886     9999999999999 6679999999763

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=97.76  E-value=3.8e-05  Score=59.00  Aligned_cols=52  Identities=12%  Similarity=-0.063  Sum_probs=45.9

Q ss_pred             hHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCC---cEEEeecCccee
Q 026540            4 VEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDM---RCKVVDFGNACR   55 (237)
Q Consensus         4 ~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~---~~kl~dfg~~~~   55 (237)
                      +......++.++.+.+.-+|..++.|+|+++.|||++.+.   .+.++||+.+..
T Consensus       116 ~~~~~~~ll~~l~~~i~~lH~~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~  170 (206)
T PF06293_consen  116 DPSQRRELLRALARLIAKLHDAGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRF  170 (206)
T ss_pred             chhhHHHHHHHHHHHHHHHHHCcCCCCCCCcccEEEeCCCCceeEEEEcchhcee
Confidence            3556788999999999999999999999999999999887   899999987643

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane

>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional

Probab=97.75  E-value=4e-05  Score=61.16  Aligned_cols=50  Identities=16%  Similarity=0.015  Sum_probs=43.6

Q ss_pred             HHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCC-------CCcEEEeecCcce
Q 026540            5 EKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGI-------DMRCKVVDFGNAC   54 (237)
Q Consensus         5 ~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~-------~~~~kl~dfg~~~   54 (237)
                      +.....++.+++..+.-+|..++.|+|++++|||++.       +..+.++||+.+.
T Consensus       137 ~~~~~~ll~~la~~i~~LH~~Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r~~  193 (268)
T PRK15123        137 PRLKRMLIKRVATMVRDMHAAGINHRDCYICHFLLHLPFPGREEDLKLSVIDLHRAQ  193 (268)
T ss_pred             HHHHHHHHHHHHHHHHHHHHCcCccCCCChhhEEEeccccCCCCCceEEEEECCccc
Confidence            3456688999999999999999999999999999975       4688999999764

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=97.70  E-value=5.3e-05  Score=64.80  Aligned_cols=48  Identities=15%  Similarity=-0.058  Sum_probs=39.8

Q ss_pred             HHHHHHHh-hhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecC
Q 026540           10 RRAKRAVA-NISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRAN   57 (237)
Q Consensus        10 ~~~~~~l~-~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~   57 (237)
                      +++..++. .+..+|..++.|+|++|.||+++.++.++++|||++....
T Consensus       260 ~ia~~~~~~~l~ql~~~g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~  308 (437)
T TIGR01982       260 ALAENLARSFLNQVLRDGFFHADLHPGNIFVLKDGKIIALDFGIVGRLS  308 (437)
T ss_pred             HHHHHHHHHHHHHHHhCCceeCCCCcccEEECCCCcEEEEeCCCeeECC
Confidence            45555555 4677899999999999999999999999999999986554

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=97.34  E-value=0.00017  Score=60.85  Aligned_cols=41  Identities=12%  Similarity=-0.035  Sum_probs=35.0

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhhh-cCCccCCCCCccccCCC
Q 026540            2 TIVEKKLKRRAKRAVANISIRRAS-MGGIELPKPERCLDGID   42 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~~-~~~h~d~kp~Nili~~~   42 (237)
                      ||.-...+.|++|+|.||.|||.. +|+|.||||+|||+..+
T Consensus       183 Glpl~~VK~I~~qvL~GLdYLH~ecgIIHTDlKPENvLl~~~  224 (590)
T KOG1290|consen  183 GLPLSCVKEICRQVLTGLDYLHRECGIIHTDLKPENVLLCST  224 (590)
T ss_pred             CCcHHHHHHHHHHHHHHHHHHHHhcCccccCCCcceeeeecc
Confidence            455667889999999999999986 56799999999998654

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=97.31  E-value=0.00025  Score=61.92  Aligned_cols=35  Identities=20%  Similarity=0.020  Sum_probs=30.6

Q ss_pred             hhhcCCccCCCCCccccCCCC----cEEEeecCcceecC
Q 026540           23 RASMGGIELPKPERCLDGIDM----RCKVVDFGNACRAN   57 (237)
Q Consensus        23 ~~~~~~h~d~kp~Nili~~~~----~~kl~dfg~~~~~~   57 (237)
                      ...++.|+|++|.||+++.++    .++++|||+....+
T Consensus       277 f~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~  315 (537)
T PRK04750        277 FRDGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLN  315 (537)
T ss_pred             HhCCeeeCCCChHHeEEecCCCCCCeEEEEecceEEECC
Confidence            457899999999999999887    99999999986554

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=97.30  E-value=0.00031  Score=52.28  Aligned_cols=46  Identities=7%  Similarity=-0.184  Sum_probs=40.2

Q ss_pred             HHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCccee
Q 026540            9 KRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACR   55 (237)
Q Consensus         9 ~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~   55 (237)
                      ..+++.+-..+.-+|..+++|.||-++||++..+. +.++|||++..
T Consensus        95 ~~~~r~vG~~vg~lH~~givHGDLTtsNiIl~~~~-i~~IDfGLg~~  140 (204)
T COG3642          95 PDLLREVGRLVGKLHKAGIVHGDLTTSNIILSGGR-IYFIDFGLGEF  140 (204)
T ss_pred             hHHHHHHHHHHHHHHhcCeecCCCccceEEEeCCc-EEEEECCcccc
Confidence            45777888888889999999999999999998875 99999999853

>KOG1243 consensus Protein kinase [General function prediction only]

Probab=97.21  E-value=0.00086  Score=58.82  Aligned_cols=94  Identities=15%  Similarity=0.119  Sum_probs=66.6

Q ss_pred             HHHHHHHHHHHHhhhhhhh-hhcCCccCCCCCccccCCCCcEEEeecCcceecCcCc---ccCcCCCcccchHHhhhcCC
Q 026540            5 EKKLKRRAKRAVANISIRR-ASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQF---AEEIQTRQYRAPEVILRAGY   80 (237)
Q Consensus         5 ~~~~~~~~~~~l~~l~~~~-~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~~---~~~~~~~~~~~PE~~~~~~~   80 (237)
                      +.....-+.||+.||.||| ..+..|.++.-+.++|+..|..||++|..+.......   ........|..|+.+.... 
T Consensus       103 ~~~v~~Gl~qIl~AL~FL~~d~~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~~~~~~~~~~s~~~P~~~~~s~-  181 (690)
T KOG1243|consen  103 KEEVCLGLFQILAALSFLNDDCNLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNAPAKSLYLIESFDDPEEIDPSE-  181 (690)
T ss_pred             HHHHHHHHHHHHHHHHHHhccCCeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCcccccchhhhcccChhhcCccc-
Confidence            3445566889999999997 6777899999999999999999999998764432211   1111122345554432222 


Q ss_pred             CchhhhhhhhhHHHHHhcCC
Q 026540           81 SFSVDMWSFACTAFELATGD  100 (237)
Q Consensus        81 ~~~~diws~g~~l~~~~~g~  100 (237)
                       -..|.|.||+++++++.|.
T Consensus       182 -~s~D~~~Lg~li~el~ng~  200 (690)
T KOG1243|consen  182 -WSIDSWGLGCLIEELFNGS  200 (690)
T ss_pred             -cchhhhhHHHHHHHHhCcc
Confidence             2369999999999999994

>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=97.20  E-value=0.00027  Score=53.31  Aligned_cols=50  Identities=14%  Similarity=0.036  Sum_probs=38.8

Q ss_pred             HHHHHHHHHHHhhhhh-hhhhcCCccCCCCCccccCCCCcEEEeecCcceec
Q 026540            6 KKLKRRAKRAVANISI-RRASMGGIELPKPERCLDGIDMRCKVVDFGNACRA   56 (237)
Q Consensus         6 ~~~~~~~~~~l~~l~~-~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~   56 (237)
                      .+...++.++++.+.. +|..+++|.|+.+.||+++.+ .+.++|||.+...
T Consensus       106 ~~~~~~~~~il~~~~~~~~~~givHGDLs~~NIlv~~~-~~~iIDf~qav~~  156 (188)
T PF01163_consen  106 EEPKELLEEILEEIIKMLHKAGIVHGDLSEYNILVDDG-KVYIIDFGQAVDS  156 (188)
T ss_dssp             STHHHHHHHHHHHHHHHHHCTTEEESS-STTSEEEETT-CEEE--GTTEEET
T ss_pred             hhHHHHHHHHHHHHHHHHHhcCceecCCChhhEEeecc-eEEEEecCcceec
Confidence            4567788888886665 579999999999999999887 8999999987554

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.

>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]

Probab=97.20  E-value=0.00042  Score=51.62  Aligned_cols=47  Identities=17%  Similarity=-0.051  Sum_probs=40.8

Q ss_pred             HHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCC---cEEEeecCccee
Q 026540            9 KRRAKRAVANISIRRASMGGIELPKPERCLDGIDM---RCKVVDFGNACR   55 (237)
Q Consensus         9 ~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~---~~kl~dfg~~~~   55 (237)
                      ..+++.+-+.+.-+|..+++|.||-.+||++..++   .+.++|||++..
T Consensus       116 ~~~~~~iG~~igklH~ndiiHGDLTTSNill~~~~~~~~~~lIdfgls~~  165 (229)
T KOG3087|consen  116 AELARRIGELIGKLHDNDIIHGDLTTSNILLRSDGNQITPILIDFGLSSV  165 (229)
T ss_pred             HHHHHHHHHHHHHhhhCCeecccccccceEEecCCCcCceEEEeecchhc
Confidence            67888999999999999999999999999997654   458999999754

>PRK09902 hypothetical protein; Provisional

Probab=96.65  E-value=0.003  Score=48.39  Aligned_cols=50  Identities=4%  Similarity=-0.092  Sum_probs=42.6

Q ss_pred             HHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCc--EEEeecCcce
Q 026540            5 EKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMR--CKVVDFGNAC   54 (237)
Q Consensus         5 ~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~--~kl~dfg~~~   54 (237)
                      +.+-..++.++...+.-+|..++.|+|+-+.||+++.++.  +.++||.-++
T Consensus       127 ~~~k~~il~~va~~ia~LH~~Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r  178 (216)
T PRK09902        127 DEVRQAMLKAVALAFKKMHSVNRQHGCCYVRHIYVKTEGKAEAGFLDLEKSR  178 (216)
T ss_pred             hHHHHHHHHHHHHHHHHHHHCCCcCCCCCHhheeecCCCCeeEEEEEhhccc
Confidence            3444688899999999999999999999999999986666  8999997553

>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]

Probab=96.51  E-value=0.024  Score=48.89  Aligned_cols=86  Identities=16%  Similarity=0.070  Sum_probs=66.4

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcCcccCcCCCcccchHHhhhcCCC
Q 026540            2 TIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYS   81 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~   81 (237)
                      ++.|..+--|+-|+..||.++|+.|...+-+.|.+||++.+..++++..|+.........         +|  +.   -.
T Consensus       389 ~~~e~~lW~y~~QLtaaL~sIHssGLAck~L~~~kIlv~G~~RIriS~C~i~Dvl~~d~~---------~~--le---~~  454 (655)
T KOG3741|consen  389 KAPEEVLWSYISQLTAALYSIHSSGLACKTLDLKKILVTGKMRIRISGCGIMDVLQEDPT---------EP--LE---SQ  454 (655)
T ss_pred             CchHHHHHHHHHHHHHHHHHHHhcCceeecccHhHeEeeCcceEEEecccceeeecCCCC---------cc--hh---HH
Confidence            466888889999999999999999999999999999999998899988776543322211         11  10   01


Q ss_pred             chhhhhhhhhHHHHHhcCCc
Q 026540           82 FSVDMWSFACTAFELATGDM  101 (237)
Q Consensus        82 ~~~diws~g~~l~~~~~g~~  101 (237)
                      .+-|.--+|.+++.+.+|..
T Consensus       455 Qq~D~~~lG~ll~aLAt~~~  474 (655)
T KOG3741|consen  455 QQNDLRDLGLLLLALATGTE  474 (655)
T ss_pred             hhhhHHHHHHHHHHHhhccc
Confidence            35678889999999999853

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=96.48  E-value=0.011  Score=55.55  Aligned_cols=156  Identities=14%  Similarity=0.158  Sum_probs=96.5

Q ss_pred             hHHHHHHHHHHHHhhhhhhhhhcCCccCCCCC---ccccCCCCcEEEe--ecCcceecCcCcc--cCcCCCcccchHHhh
Q 026540            4 VEKKLKRRAKRAVANISIRRASMGGIELPKPE---RCLDGIDMRCKVV--DFGNACRANKQFA--EEIQTRQYRAPEVIL   76 (237)
Q Consensus         4 ~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~---Nili~~~~~~kl~--dfg~~~~~~~~~~--~~~~~~~~~~PE~~~   76 (237)
                      +-...+.+..++++|+.++|+....|.=+..+   +-.++..+.....  ||+.+........  ....+..+-+++...
T Consensus       284 ~~~~~r~~~~~~~~GL~~~h~~~l~~v~L~~s~~~~~~~~~e~~~~~sl~~~~ss~~l~d~~~~~~~~~~~~~~~~e~~~  363 (1351)
T KOG1035|consen  284 PLETLRILHQKLLEGLAYLHSLSLEHVVLSASSSKESTVDGEGVVAISLSDFDSSKPLPDNEKSFSDLLAEIRNADEDLK  363 (1351)
T ss_pred             CHHHHHHHHHHHhhhHHHHHHhccceeEEecccccccccCccceeecchhhhcccccCCCcccchhhcCccccccccccc
Confidence            34566778899999999999997766444333   3333444555555  7776654332211  112244566666666


Q ss_pred             hcCCCc--hhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcc
Q 026540           77 RAGYSF--SVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRR  154 (237)
Q Consensus        77 ~~~~~~--~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (237)
                      ......  ..|+|.+|.....+..|..+-.-.            .....+                              
T Consensus       364 ~~~~~~~r~~dL~~lgll~~~~~~~~~i~~~~------------~~~~~~------------------------------  401 (1351)
T KOG1035|consen  364 ENTAKKSRLTDLWCLGLLLLQLSQGEDISEKS------------AVPVSL------------------------------  401 (1351)
T ss_pred             cccchhhhhhHHHHHHHHHhhhhhcCcccccc------------cchhhh------------------------------
Confidence            555443  479999999999888775321100            000000                              


Q ss_pred             ccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccCCccccc
Q 026540          155 LKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNSTRDETK  216 (237)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~~~~~~~  216 (237)
                                     ++..+.....++..+|+.-++++|+++.+++.|+|.+........++
T Consensus       402 ---------------l~~~~~~~~~d~~~~~~~~~~~~Rl~~~~ll~~~f~~~~~~~~~~~~  448 (1351)
T KOG1035|consen  402 ---------------LDVLSTSELLDALPKCLDEDSEERLSALELLTHPFLRFPTDNESSEF  448 (1351)
T ss_pred             ---------------hccccchhhhhhhhhhcchhhhhccchhhhhhchhcccccccccccc
Confidence                           00111125668889999999999999999999999986655554333

>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY)

Probab=96.34  E-value=0.0054  Score=47.26  Aligned_cols=42  Identities=17%  Similarity=0.065  Sum_probs=35.7

Q ss_pred             HHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcc
Q 026540           11 RAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNA   53 (237)
Q Consensus        11 ~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~   53 (237)
                      ++..+.+++.-+|..|..|.|+.|.|+++..++ ++++|++-.
T Consensus       140 ~~~ki~~~ikqlH~~G~~HGD~hpgNFlv~~~~-i~iID~~~k  181 (229)
T PF06176_consen  140 LAEKIVEAIKQLHKHGFYHGDPHPGNFLVSNNG-IRIIDTQGK  181 (229)
T ss_pred             HHHHHHHHHHHHHHcCCccCCCCcCcEEEECCc-EEEEECccc
Confidence            445677888999999999999999999998655 999999743

The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=96.16  E-value=0.0051  Score=54.17  Aligned_cols=96  Identities=19%  Similarity=0.112  Sum_probs=74.3

Q ss_pred             hHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC--cccCcCCCcccchHHhhhcCCC
Q 026540            4 VEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ--FAEEIQTRQYRAPEVILRAGYS   81 (237)
Q Consensus         4 ~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~--~~~~~~~~~~~~PE~~~~~~~~   81 (237)
                      .+=+.....+.-++.++++|+.-..|||    ||+..+ ...+..+|+....+...  .....+++.+++||+.....+.
T Consensus       334 ~~~~~~~~~r~et~~l~~l~~~~~~~~d----~~l~s~-~~~~~~~~~v~~~L~~~~~~~t~~~~~~~~~pev~~~~~~~  408 (829)
T KOG0576|consen  334 EQYQFAYPLRKETRPLAELHSSYKVHRD----NILGSE-EEVKLLDFAVPPQLTRTMKPRTAIGTPEPLAPEVIQENTID  408 (829)
T ss_pred             hhhhhhhhhhhhcccccccccccccCcc----cccccc-cccccccccCCcccCcccccccCCCCCCCCCchhhcccccc
Confidence            3445667778889999999999888888    666554 56899999987655543  3455778999999999999999


Q ss_pred             chhhhhhhhhHHHHHhcCCcccC
Q 026540           82 FSVDMWSFACTAFELATGDMLFA  104 (237)
Q Consensus        82 ~~~diws~g~~l~~~~~g~~~f~  104 (237)
                      ...|.|+.+.--.++..|-.|-.
T Consensus       409 ~~p~~~~~~~~~~~~ap~~pPr~  431 (829)
T KOG0576|consen  409 GCPDSGSLAVSAIQMAPGLPPRS  431 (829)
T ss_pred             cCCCccCCCcchhhcCCCCCCCC
Confidence            99999999986666666655543

>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]

Probab=95.71  E-value=0.012  Score=46.66  Aligned_cols=48  Identities=10%  Similarity=-0.096  Sum_probs=41.0

Q ss_pred             HHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcc
Q 026540            6 KKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNA   53 (237)
Q Consensus         6 ~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~   53 (237)
                      ..+..++..+++-+...-..|++|.|+++-||+++.+|.+.++||--+
T Consensus       202 en~~~il~~il~~~~~~~~~GiVHGDlSefNIlV~~dg~~~vIDwPQ~  249 (304)
T COG0478         202 ENPDEILDKILEEVRKAYRRGIVHGDLSEFNILVTEDGDIVVIDWPQA  249 (304)
T ss_pred             cCHHHHHHHHHHHHHHHHHcCccccCCchheEEEecCCCEEEEeCccc
Confidence            445667777788888788999999999999999999999999999744

>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]

Probab=94.74  E-value=0.049  Score=42.74  Aligned_cols=52  Identities=10%  Similarity=-0.121  Sum_probs=44.8

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhh-hcCCccCCCCCccccCCCCcEEEeecCccee
Q 026540            3 IVEKKLKRRAKRAVANISIRRA-SMGGIELPKPERCLDGIDMRCKVVDFGNACR   55 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~-~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~   55 (237)
                      +...++..+..++++++.-+-. .+.+|.||+.=|||+. ++.+.++|++-+..
T Consensus       163 ~e~~e~~~~~~~~v~~~~~l~~~a~LVHgDLSEyNiL~~-~~~p~iID~~QaV~  215 (268)
T COG1718         163 LELEEAEGLYEDVVEYMRRLYKEAGLVHGDLSEYNILVH-DGEPYIIDVSQAVT  215 (268)
T ss_pred             cCchhHHHHHHHHHHHHHHHHHhcCcccccchhhheEEE-CCeEEEEECccccc
Confidence            3444788888999999999888 8999999999999999 78899999997644

>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C)

Probab=94.58  E-value=0.035  Score=41.95  Aligned_cols=51  Identities=12%  Similarity=-0.014  Sum_probs=43.7

Q ss_pred             hHHHHHHHHHHHHhhhhhhhh---hcCCccCCCCCccccCCCCcEEEeecCcce
Q 026540            4 VEKKLKRRAKRAVANISIRRA---SMGGIELPKPERCLDGIDMRCKVVDFGNAC   54 (237)
Q Consensus         4 ~~~~~~~~~~~~l~~l~~~~~---~~~~h~d~kp~Nili~~~~~~kl~dfg~~~   54 (237)
                      +-.+.++++.++++.+++++.   .....+|++++|+-++.++.+|++|.....
T Consensus        57 ~w~~R~~iA~~lL~~l~~l~~~~~~~~~lcDv~~~nfgv~~~~~lk~iDld~v~  110 (188)
T PF12260_consen   57 PWEQRAKIALQLLELLEELDHGPLGFFYLCDVSPDNFGVNDDGRLKLIDLDDVF  110 (188)
T ss_pred             CHHHHHHHHHHHHHHHHHHhcCCCCcEEEeecchHHeEEeCCCcEEEEechhcc
Confidence            346788999999999999987   335689999999999999999999998653

Proteins in this uncharacterised family are described as transmembrane proteins.

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=93.22  E-value=0.088  Score=40.27  Aligned_cols=31  Identities=13%  Similarity=-0.204  Sum_probs=26.1

Q ss_pred             hhcCCccCCCCCccccCC--CCcEEEeecCcce
Q 026540           24 ASMGGIELPKPERCLDGI--DMRCKVVDFGNAC   54 (237)
Q Consensus        24 ~~~~~h~d~kp~Nili~~--~~~~kl~dfg~~~   54 (237)
                      ....+|+|+.+.||+++.  ++.+.++||+.+.
T Consensus       173 ~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~  205 (223)
T cd05154         173 RPGLVHGDYRLGNVLFHPDEPRVVAVLDWELAT  205 (223)
T ss_pred             CcEEEECCCCcccEEEcCCCCcEEEEEeccccc
Confidence            456789999999999998  5678999998653

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only]

Probab=92.74  E-value=0.11  Score=45.18  Aligned_cols=92  Identities=15%  Similarity=0.168  Sum_probs=59.4

Q ss_pred             CchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCch
Q 026540           81 SFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSL  160 (237)
Q Consensus        81 ~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (237)
                      ++++||||+|.++.++..|...+....      ....+.-++.+. ..+...                            
T Consensus       109 ~pKsdVwsl~~i~~el~L~~~l~~~~~------~s~~l~~i~k~~-~~d~~~----------------------------  153 (725)
T KOG1093|consen  109 GPKSDVWSLGFIILELYLGISLEAELT------ESEYLEILLKYY-TDDQEL----------------------------  153 (725)
T ss_pred             CcchhhhhHHHHHHHHHHhhHHHHHHH------HHHHHHHHHHhc-cCchhH----------------------------
Confidence            468999999999999999877664331      223333332221 111110                            


Q ss_pred             hHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcc
Q 026540          161 DRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLR  208 (237)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~  208 (237)
                      ..+..+. .....+...+.++..+|+-..|..||...++.+++-|...
T Consensus       154 ~~~a~e~-~~~~~~d~~~~~~~~~c~~~~~~ir~l~~~~~k~~i~~ev  200 (725)
T KOG1093|consen  154 LSTAMEH-LIQLLADKKRLPLLKKCLWLEPIIRPLPMELSKRCSFTEV  200 (725)
T ss_pred             HHHHHHH-HHHHhhhHhHHHHhccCCccccccccchhHHhcCccHHHH
Confidence            0000000 1122346778899999999999999999999999998866

>COG0661 AarF Predicted unusual protein kinase [General function prediction only]

Probab=91.67  E-value=0.3  Score=42.87  Aligned_cols=33  Identities=27%  Similarity=0.193  Sum_probs=29.6

Q ss_pred             hcCCccCCCCCccccCCCCcEEEeecCcceecC
Q 026540           25 SMGGIELPKPERCLDGIDMRCKVVDFGNACRAN   57 (237)
Q Consensus        25 ~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~   57 (237)
                      .+..|.|+.|.||++..++.+.+.|||......
T Consensus       284 dgffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~  316 (517)
T COG0661         284 DGFFHADPHPGNILVRSDGRIVLLDFGIVGRLD  316 (517)
T ss_pred             cCccccCCCccceEEecCCcEEEEcCcceecCC
Confidence            678899999999999999999999999876544

>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members

Probab=91.60  E-value=0.19  Score=39.28  Aligned_cols=30  Identities=20%  Similarity=0.036  Sum_probs=25.0

Q ss_pred             hhcCCccCCCCCccccCCCCcEEEeecCcc
Q 026540           24 ASMGGIELPKPERCLDGIDMRCKVVDFGNA   53 (237)
Q Consensus        24 ~~~~~h~d~kp~Nili~~~~~~kl~dfg~~   53 (237)
                      ....+|.|+.+.|++++.+....|+||+.+
T Consensus       163 ~~~l~HGD~~~~Nvlv~~~~i~giIDw~~a  192 (235)
T cd05155         163 PPVWFHGDLAPGNLLVQDGRLSAVIDFGCL  192 (235)
T ss_pred             CceEEeCCCCCCcEEEECCCEEEEEeCccc
Confidence            344689999999999987766789999965

The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista

>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes

Probab=91.37  E-value=0.23  Score=38.60  Aligned_cols=29  Identities=10%  Similarity=-0.067  Sum_probs=25.1

Q ss_pred             hcCCccCCCCCccccCC-CCcEEEeecCcc
Q 026540           25 SMGGIELPKPERCLDGI-DMRCKVVDFGNA   53 (237)
Q Consensus        25 ~~~~h~d~kp~Nili~~-~~~~kl~dfg~~   53 (237)
                      ....|.|+.+.|||++. ++.+.++||..+
T Consensus       170 ~~l~H~Dl~~~Nil~~~~~~~~~lIDwe~a  199 (235)
T cd05157         170 IVFCHNDLLSGNIIYNEEKNSVKFIDYEYA  199 (235)
T ss_pred             EEEEcCCCCcCcEEEeCCCCCEEEEEcccC
Confidence            45789999999999998 578999999865

ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo

>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily

Probab=90.93  E-value=0.16  Score=39.05  Aligned_cols=31  Identities=23%  Similarity=0.145  Sum_probs=21.0

Q ss_pred             hhhcCCccCCCCCccccC-CCCcEEEeecCcc
Q 026540           23 RASMGGIELPKPERCLDG-IDMRCKVVDFGNA   53 (237)
Q Consensus        23 ~~~~~~h~d~kp~Nili~-~~~~~kl~dfg~~   53 (237)
                      .....+|.|+.|.||+++ .++.+.++||+.+
T Consensus       164 ~~~~~~HgD~~~~Nil~~~~~~~i~iID~e~a  195 (239)
T PF01636_consen  164 LPPVLIHGDLHPGNILVDPSDGRIGIIDFEDA  195 (239)
T ss_dssp             SCEEEE-SS-SGGGEEEESSTTEEEE--GTT-
T ss_pred             CCcEEEEeccccccceeeeccceeEEEecccc
Confidence            346678999999999999 5566689999865

; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....

>PRK05231 homoserine kinase; Provisional

Probab=90.92  E-value=0.36  Score=39.48  Aligned_cols=30  Identities=20%  Similarity=-0.058  Sum_probs=25.6

Q ss_pred             hcCCccCCCCCccccCCCCcEEEeecCcce
Q 026540           25 SMGGIELPKPERCLDGIDMRCKVVDFGNAC   54 (237)
Q Consensus        25 ~~~~h~d~kp~Nili~~~~~~kl~dfg~~~   54 (237)
                      .+.+|.|+.|.||+++.+....++||+.+.
T Consensus       187 ~~liHgD~~~~Nil~~~~~~~~iIDf~~~~  216 (319)
T PRK05231        187 RGVIHADLFRDNVLFEGDRLSGFIDFYFAC  216 (319)
T ss_pred             cccCCCCCCCCcEEEECCceEEEEeccccc
Confidence            478999999999999977666899999763

>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]

Probab=90.75  E-value=0.41  Score=40.03  Aligned_cols=50  Identities=8%  Similarity=-0.045  Sum_probs=41.1

Q ss_pred             hHHHHHHHHHHHHhhhhhhhhhc-CCccCCCCCccccCCCCcEEEeecCcce
Q 026540            4 VEKKLKRRAKRAVANISIRRASM-GGIELPKPERCLDGIDMRCKVVDFGNAC   54 (237)
Q Consensus         4 ~~~~~~~~~~~~l~~l~~~~~~~-~~h~d~kp~Nili~~~~~~kl~dfg~~~   54 (237)
                      ..+++..|+.++++-++.+-..- .-|||+-..||||+ +|.+.|+||.+++
T Consensus       319 ~~~e~lsff~s~~sil~~lekkf~fehrnlt~~niLId-~GnvtLIDfklsR  369 (488)
T COG5072         319 RSEEELSFFWSCISILDILEKKFPFEHRNLTLDNILID-EGNVTLIDFKLSR  369 (488)
T ss_pred             cHHHHHHHHHHHHHHHhhhhhcCCcccccccccceeee-cCceEEEEeeeee
Confidence            35688899999887777655433 35999999999999 9999999999886

>TIGR00938 thrB_alt homoserine kinase, Neisseria type

Probab=90.30  E-value=0.4  Score=39.05  Aligned_cols=29  Identities=24%  Similarity=-0.074  Sum_probs=26.0

Q ss_pred             hcCCccCCCCCccccCCCCcEEEeecCcc
Q 026540           25 SMGGIELPKPERCLDGIDMRCKVVDFGNA   53 (237)
Q Consensus        25 ~~~~h~d~kp~Nili~~~~~~kl~dfg~~   53 (237)
                      .+++|.|+.+.|++++.++.+.++||+.+
T Consensus       187 ~~l~HgD~~~~Nvl~~~~~~~~vIDfd~~  215 (307)
T TIGR00938       187 RGVIHADLFPDNVLFDGDSVKGVIDFYFA  215 (307)
T ss_pred             CccCCCCCCcCcEEEECCceEEEeecccc
Confidence            67899999999999998877789999865

Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.

>TIGR02906 spore_CotS spore coat protein, CotS family

Probab=89.36  E-value=0.58  Score=38.03  Aligned_cols=28  Identities=14%  Similarity=-0.161  Sum_probs=24.0

Q ss_pred             hcCCccCCCCCccccCCCCcEEEeecCcc
Q 026540           25 SMGGIELPKPERCLDGIDMRCKVVDFGNA   53 (237)
Q Consensus        25 ~~~~h~d~kp~Nili~~~~~~kl~dfg~~   53 (237)
                      .+++|+|+.+.||+++. +.+.++||+.+
T Consensus       187 ~~liHgD~~~~Nil~~~-~~i~lIDfd~~  214 (313)
T TIGR02906       187 RGFCHQDYAYHNILLKD-NEVYVIDFDYC  214 (313)
T ss_pred             CceEcCCCCcccEEEeC-CcEEEEECccc
Confidence            56789999999999987 56889999854

Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.

>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes

Probab=89.31  E-value=0.69  Score=37.52  Aligned_cols=29  Identities=14%  Similarity=-0.087  Sum_probs=24.8

Q ss_pred             hcCCccCCCCCccccCCC----CcEEEeecCcc
Q 026540           25 SMGGIELPKPERCLDGID----MRCKVVDFGNA   53 (237)
Q Consensus        25 ~~~~h~d~kp~Nili~~~----~~~kl~dfg~~   53 (237)
                      ....|.|+.+.||+++.+    +.+.++||..+
T Consensus       179 ~~lcH~Dl~~~Nil~~~~~~~~~~i~lIDwEya  211 (302)
T cd05156         179 VVFCHNDLQEGNILLLNPSSETKKLVLIDFEYA  211 (302)
T ss_pred             ceEEecCCCcCeEEecCCCCCCCcEEEEeeCCC
Confidence            345799999999999874    78999999865

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer

>PRK10271 thiK thiamine kinase; Provisional

Probab=88.79  E-value=0.3  Score=36.77  Aligned_cols=26  Identities=8%  Similarity=-0.050  Sum_probs=22.8

Q ss_pred             CccCCCCCccccCCCCcEEEeecCcce
Q 026540           28 GIELPKPERCLDGIDMRCKVVDFGNAC   54 (237)
Q Consensus        28 ~h~d~kp~Nili~~~~~~kl~dfg~~~   54 (237)
                      .|.|+.|.|+++..++ ++++||+.+.
T Consensus        80 ~H~D~~~~N~~~~~~~-~~lIDwe~a~  105 (188)
T PRK10271         80 LHMDVHAGNLVHSASG-LRLIDWEYAG  105 (188)
T ss_pred             ecCCCCCccEEEECCC-EEEEeCCccc
Confidence            5999999999998777 8899999763

>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]

Probab=88.22  E-value=0.83  Score=40.22  Aligned_cols=54  Identities=15%  Similarity=-0.007  Sum_probs=36.9

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCC----CCcEEEeecCcceecC
Q 026540            2 TIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGI----DMRCKVVDFGNACRAN   57 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~----~~~~kl~dfg~~~~~~   57 (237)
                      |++.+++...+.++..-+  +-..|..|.|..|-||++..    +..+.+.|||+.....
T Consensus       299 gi~~~~i~~~l~~~~~~q--If~~GffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~is  356 (538)
T KOG1235|consen  299 GISPHDILNKLVEAYLEQ--IFKTGFFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVIS  356 (538)
T ss_pred             CCCHHHHHHHHHHHHHHH--HHhcCCccCCCCCCcEEEecCCCCCccEEEEccccccccc
Confidence            455555555444443333  33346799999999999984    6789999999875443

>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2

Probab=88.09  E-value=0.62  Score=35.66  Aligned_cols=30  Identities=23%  Similarity=0.109  Sum_probs=20.1

Q ss_pred             hcCCccCCCCCcccc-CCCCcEEEeecCcce
Q 026540           25 SMGGIELPKPERCLD-GIDMRCKVVDFGNAC   54 (237)
Q Consensus        25 ~~~~h~d~kp~Nili-~~~~~~kl~dfg~~~   54 (237)
                      .-..|.|+.+.|||+ +.++.++++||..+.
T Consensus       143 ~v~cHnDl~~~Nil~~~~~~~~~lIDfEya~  173 (211)
T PF01633_consen  143 LVFCHNDLNPGNILINNKDGEVKLIDFEYAG  173 (211)
T ss_dssp             EEEE-S--SGGGEEETSSSSCEEE--GTT-E
T ss_pred             ceEeeccCccccEEeccCCCeEEEecHHHHh
Confidence            344699999999999 778999999998763

7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....

>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH)

Probab=87.75  E-value=0.56  Score=36.69  Aligned_cols=29  Identities=7%  Similarity=-0.118  Sum_probs=25.2

Q ss_pred             hcCCccCCCCCccccCCCCcEEEeecCcc
Q 026540           25 SMGGIELPKPERCLDGIDMRCKVVDFGNA   53 (237)
Q Consensus        25 ~~~~h~d~kp~Nili~~~~~~kl~dfg~~   53 (237)
                      ...+|+|+.|.|||++.+..+.|+||+.+
T Consensus       163 ~~l~HgD~~~~Nil~~~~~~~~iIDwe~a  191 (244)
T cd05150         163 LVVTHGDACLPNIIVDPGKFSGFIDLGRL  191 (244)
T ss_pred             eEEECCCCCCccEEEeCCcEEEEEEcccc
Confidence            45689999999999999877899999865

The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio

>COG0510 ycfN Thiamine kinase and related kinases [Coenzyme transport and metabolism]

Probab=87.47  E-value=0.95  Score=36.29  Aligned_cols=45  Identities=11%  Similarity=-0.029  Sum_probs=33.3

Q ss_pred             HHHHHHHhhhhhhhhh--cCCccCCCCCccccCCCCcEEEeecCcce
Q 026540           10 RRAKRAVANISIRRAS--MGGIELPKPERCLDGIDMRCKVVDFGNAC   54 (237)
Q Consensus        10 ~~~~~~l~~l~~~~~~--~~~h~d~kp~Nili~~~~~~kl~dfg~~~   54 (237)
                      +.+..+-.++.-.+..  -..|.|+.|.|++.+..+.++|+||.-|.
T Consensus       136 ~~~~~l~~~l~~~~~~~~v~cH~Dl~~~N~l~t~~~~l~LIDWEyAg  182 (269)
T COG0510         136 KKLKELRRALEEVPKDDLVPCHNDLNPGNLLLTDKGGLFLIDWEYAG  182 (269)
T ss_pred             HHHHHHHHHhhhcCCCceeeecCCCCccceEEcCCCcEEEEecccCC
Confidence            3444444455544444  45699999999999998999999998664

>cd05153 HomoserineK_II Homoserine Kinase, type II

Probab=87.10  E-value=0.4  Score=38.71  Aligned_cols=29  Identities=21%  Similarity=-0.148  Sum_probs=25.6

Q ss_pred             hcCCccCCCCCccccCCCCcEEEeecCcc
Q 026540           25 SMGGIELPKPERCLDGIDMRCKVVDFGNA   53 (237)
Q Consensus        25 ~~~~h~d~kp~Nili~~~~~~kl~dfg~~   53 (237)
                      ...+|.|+.|.|++++.++.+.|+||+.+
T Consensus       175 ~~l~HgD~~~~Nil~~~~~~~~iIDfe~a  203 (296)
T cd05153         175 RGVIHADLFRDNVLFDGDELSGVIDFYFA  203 (296)
T ss_pred             CcCCccCcCcccEEEeCCceEEEeehhhh
Confidence            46789999999999999877899999865

Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.

>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172

Probab=86.43  E-value=0.73  Score=35.87  Aligned_cols=26  Identities=8%  Similarity=-0.170  Sum_probs=23.1

Q ss_pred             CCccCCCCCccccCCCCcEEEeecCcc
Q 026540           27 GGIELPKPERCLDGIDMRCKVVDFGNA   53 (237)
Q Consensus        27 ~~h~d~kp~Nili~~~~~~kl~dfg~~   53 (237)
                      ..|.|+.|.||+++.++ +.++||+.+
T Consensus       155 ~~HgD~~~~Nii~~~~~-~~iIDwe~a  180 (226)
T TIGR02172       155 CLHGDFQIGNLITSGKG-TYWIDLGDF  180 (226)
T ss_pred             eEecCCCCCcEEEcCCC-cEEEechhc
Confidence            36999999999999888 999999865

This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.

>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]

Probab=86.09  E-value=1  Score=37.19  Aligned_cols=27  Identities=22%  Similarity=0.139  Sum_probs=24.3

Q ss_pred             CCccCCCCCccccCCCCc-EEEeecCcc
Q 026540           27 GGIELPKPERCLDGIDMR-CKVVDFGNA   53 (237)
Q Consensus        27 ~~h~d~kp~Nili~~~~~-~kl~dfg~~   53 (237)
                      ++|.|+-|.||+++.+.. +.++||+-+
T Consensus       199 iIH~D~~~~NVl~d~~~~~~g~iDFdDa  226 (331)
T COG2334         199 IIHGDLHPDNVLFDDDTDVSGFIDFDDA  226 (331)
T ss_pred             eeecCCCccceeEcCCCCeeeEEEcccc
Confidence            899999999999999874 899999965

>PLN02236 choline kinase

Probab=86.03  E-value=0.81  Score=38.07  Aligned_cols=29  Identities=7%  Similarity=-0.158  Sum_probs=24.4

Q ss_pred             hcCCccCCCCCccccCC-CCcEEEeecCcc
Q 026540           25 SMGGIELPKPERCLDGI-DMRCKVVDFGNA   53 (237)
Q Consensus        25 ~~~~h~d~kp~Nili~~-~~~~kl~dfg~~   53 (237)
                      ....|+|+++.||+++. ++.+.++||..+
T Consensus       200 ~~~cH~Dl~~~Nil~~~~~~~~~lID~Eya  229 (344)
T PLN02236        200 IGFCHNDLQYGNIMIDEETRAITIIDYEYA  229 (344)
T ss_pred             ceEEeCCCCcCcEEEeCCCCcEEEEeehhc
Confidence            35579999999999976 478999999865

>TIGR02721 ycfN_thiK thiamine kinase

Probab=85.73  E-value=0.47  Score=37.51  Aligned_cols=27  Identities=11%  Similarity=-0.145  Sum_probs=23.5

Q ss_pred             cCCccCCCCCccccCCCCcEEEeecCcc
Q 026540           26 MGGIELPKPERCLDGIDMRCKVVDFGNA   53 (237)
Q Consensus        26 ~~~h~d~kp~Nili~~~~~~kl~dfg~~   53 (237)
                      ...|+|+.|.||+++.++ +.++||..+
T Consensus       147 ~l~H~Dl~~~Nil~~~~~-~~lIDwE~a  173 (256)
T TIGR02721       147 APLHMDVHAYNLVVTPQG-LKLIDWEYA  173 (256)
T ss_pred             eeecCCCCcCcEEEeCCC-CEEEecccc
Confidence            457999999999999877 789999865

Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.

>PF05445 Pox_ser-thr_kin: Poxvirus serine/threonine protein kinase; InterPro: IPR008790 This family of proteins contain poxvirus serine/threonine protein kinases, which are essential for phosphorylation of virion proteins during virion assembly

Probab=80.96  E-value=0.69  Score=38.35  Aligned_cols=17  Identities=18%  Similarity=-0.242  Sum_probs=13.8

Q ss_pred             hhcCCccCCCCCccccC
Q 026540           24 ASMGGIELPKPERCLDG   40 (237)
Q Consensus        24 ~~~~~h~d~kp~Nili~   40 (237)
                      ...-.|-||||.|||+=
T Consensus       297 c~nF~H~DLKPdNILiF  313 (434)
T PF05445_consen  297 CTNFLHVDLKPDNILIF  313 (434)
T ss_pred             cceeeecccCcCcEEEe
Confidence            34557999999999993

; GO: 0004672 protein kinase activity, 0005524 ATP binding

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	237
3beg_A	381	Crystal Structure Of Sr Protein Kinase 1 Complexed		7e-53
1wbp_A	397	Srpk1 Bound To 9mer Docking Motif Peptide Length =		7e-53
2x7g_A	389	Structure Of Human Serine-Arginine-Rich Protein-Spe		2e-51
1q8y_A	373	The Structure Of The Yeast Sr Protein Kinase, Sky1p		5e-41
1how_A	373	The X-Ray Crystal Structure Of Sky1p, An Sr Protein		5e-41
3kvw_A	429	Crystal Structure Of Dual-Specificity Tyrosine Phos		2e-17
3k2l_A	429	Crystal Structure Of Dual-Specificity Tyrosine Phos		2e-17
4azf_A	417	Human Dyrk2 In Complex With Leucettine L41 Length =		4e-17
1z57_A	339	Crystal Structure Of Human Clk1 In Complex With 10z		2e-16
3nr9_A	368	Structure Of Human Cdc2-Like Kinase 2 (Clk2) Length		3e-16
3llt_A	360	Crystal Structure Of Pf14_0431, Kinase Domain Lengt		9e-16
2vag_A	339	Crystal Structure Of Di-Phosphorylated Human Clk1 I		1e-15
3anq_A	368	Human Dyrk1aINHIBITOR COMPLEX Length = 368		1e-14
4aze_A	382	Human Dyrk1a In Complex With Leucettine L41 Length		9e-14
2vx3_A	382	Crystal Structure Of The Human Dual Specificity Tyr		1e-13
2wu6_A	381	Crystal Structure Of The Human Clk3 In Complex With		4e-12
2exe_A	357	Crystal Structure Of The Phosphorylated Clk3 Length		5e-12
2eu9_A	355	Crystal Structure Of Clk3 Length = 355		5e-12
1cm8_A	367	Phosphorylated Map Kinase P38-Gamma Length = 367		1e-11
2zoq_A	382	Structural Dissection Of Human Mitogen-Activated Ki		7e-11
3oht_A	389	Crystal Structure Of Salmo Salar P38alpha Length =		7e-11
3sa0_A	360	Complex Of Erk2 With Norathyriol Length = 360		1e-10
4fv7_A	360	Crystal Structure Of The Erk2 Complexed With E94 Le		1e-10
3vui_A	370	Crystal Structure Of A Cysteine-deficient Mutant M2		1e-10
3vuk_A	370	Crystal Structure Of A Cysteine-deficient Mutant M5		1e-10
3vuh_A	370	Crystal Structure Of A Cysteine-deficient Mutant M3		2e-10
3v3v_A	379	Structural And Functional Analysis Of Quercetagetin		2e-10
2pk9_A	317	Structure Of The Pho85-pho80 Cdk-cyclin Complex Of		2e-10
4e5a_X	360	The W197a Mutant Of P38a Map Kinase Length = 360		2e-10
3fi3_A	364	Crystal Structure Of Jnk3 With Indazole Inhibitor,		2e-10
3vug_A	370	Crystal Structure Of A Cysteine-deficient Mutant M2		2e-10
1pme_A	380	Structure Of Penta Mutant Human Erk2 Map Kinase Com		2e-10
3vud_A	370	Crystal Structure Of A Cysteine-deficient Mutant M1		2e-10
3kvx_A	364	Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Le		2e-10
3fv8_A	355	Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Le		2e-10
2r9s_A	356	C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Qu		2e-10
3tei_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		3e-10
3e7o_A	360	Crystal Structure Of Jnk2 Length = 360		3e-10
3fi2_A	353	Crystal Structure Of Jnk3 With Amino-Pyrazole Inhib		3e-10
4gsb_A	364	Monoclinic Crystal Form Of The Apo-Erk2 Length = 36		3e-10
3qyw_A	364	Crystal Structure Of Erk2 In Complex With An Inhibi		3e-10
4fux_A	360	Crystal Structure Of The Erk2 Complexed With E75 Le		3e-10
1yw2_A	360	Mutated Mus Musculus P38 Kinase (Mp38) Length = 360		3e-10
2ghl_A	348	Mutant Mus Musculus P38 Kinase Domain In Complex Wi		3e-10
3npc_A	364	Crystal Structure Of Jnk2 Complexed With Birb796 Le		4e-10
2ojg_A	380	Crystal Structure Of Erk2 In Complex With N,n-dimet		4e-10
3ptg_A	363	Design And Synthesis Of A Novel, Orally Efficacious		4e-10
2o0u_A	364	Crystal Structure Of Human Jnk3 Complexed With N-{3		4e-10
3ttj_A	464	Crystal Structure Of Jnk3 Complexed With Cc-359, A		4e-10
1pmn_A	364	Crystal Structure Of Jnk3 In Complex With An Imidaz		4e-10
3oxi_A	362	Design And Synthesis Of Disubstituted Thiophene And		4e-10
4h3q_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		4e-10
2ok1_A	365	Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3		4e-10
1wzy_A	368	Crystal Structure Of Human Erk2 Complexed With A Py		4e-10
1tvo_A	368	The Structure Of Erk2 In Complex With A Small Molec		4e-10
1jnk_A	423	The C-Jun N-Terminal Kinase (Jnk3s) Complexed With		4e-10
4h36_A	356	Crystal Structure Of Jnk3 In Complex With Atf2 Pept		4e-10
3zu7_A	365	Crystal Structure Of A Designed Selected Ankyrin Re		4e-10
2z7l_A	366	Unphosphorylated Mitogen Activated Protein Kinase E		4e-10
3c9w_A	357	Crystal Structure Of Erk-2 With Hypothemycin Covale		4e-10
2fys_B	364	Crystal Structure Of Erk2 Complex With Kim Peptide		4e-10
3o71_A	358	Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length		4e-10
3zuv_A	364	Crystal Structure Of A Designed Selected Ankyrin Re		4e-10
2b1p_A	355	Inhibitor Complex Of Jnk3 Length = 355		4e-10
2erk_A	365	Phosphorylated Map Kinase Erk2 Length = 365		4e-10
1gol_A	364	Coordinates Of Rat Map Kinase Erk2 With An Arginine		4e-10
4fv6_A	360	Crystal Structure Of The Erk2 Complexed With E57 Le		5e-10
2exc_X	356	Inhibitor Complex Of Jnk3 Length = 356		5e-10
2gph_A	364	Docking Motif Interactions In The Map Kinase Erk2 L		5e-10
2y9q_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		5e-10
1ywr_A	360	Crystal Structure Analysis Of Inactive P38 Kinase D		5e-10
3py3_A	380	Crystal Structure Of Phosphorylated P38alpha Map Ki		5e-10
3e92_A	371	Crystal Structure Of P38 Kinase In Complex With A B		5e-10
3d83_A	360	Crystal Structure Of P38 Kinase In Complex With A B		5e-10
3tg1_A	380	Crystal Structure Of P38alpha In Complex With A Map		5e-10
1bmk_A	379	The Complex Structure Of The Map Kinase P38SB218655		6e-10
2bal_A	365	P38alpha Map Kinase Bound To Pyrazoloamine Length =		6e-10
2baq_A	365	P38alpha Bound To Ro3201195 Length = 365		6e-10
1ove_A	366	The Structure Of P38 Alpha In Complex With A Dihydr		6e-10
2puu_A	348	Crystal Structure Of P38 Complex With 1-(5-Tert-But		7e-10
2gtm_A	348	Mutated Mouse P38 Map Kinase Domain In Complex With		7e-10
4exu_A	371	Mapk13, Inactive Form Length = 371		7e-10
3p4k_A	370	The Third Conformation Of P38a Map Kinase Observed		7e-10
1lew_A	360	Crystal Structure Of Map Kinase P38 Complexed To Th		7e-10
2oza_B	366	Structure Of P38alpha Complex Length = 366		7e-10
2y8o_A	362	Crystal Structure Of Human P38alpha Complexed With		7e-10
3gc9_A	370	The Structure Of P38beta C119s, C162s In Complex Wi		8e-10
3fi4_A	372	P38 Kinase Crystal Structure In Complex With Ro4499		8e-10
1ian_A	366	Human P38 Map Kinase Inhibitor Complex Length = 366		8e-10
1oz1_A	372	P38 Mitogen-Activated Kinase In Complex With 4-Azai		8e-10
2gfs_A	372	P38 Kinase Crystal Structure In Complex With Ro3201		8e-10
3nnx_A	354	Crystal Structure Of Phosphorylated P38 Alpha In Co		8e-10
3mpt_A	371	Crystal Structure Of P38 Kinase In Complex With A P		8e-10
3kq7_A	380	Structure Of Human P38alpha With N-[4-Methyl-3-(6-{		8e-10
3gcu_A	360	Human P38 Map Kinase In Complex With Rl48 Length =		8e-10
3d7z_A	360	Crystal Structure Of P38 Kinase In Complex With A B		8e-10
3dt1_A	383	P38 Complexed With A Quinazoline Inhibitor Length =		9e-10
1bl6_A	379	The Complex Structure Of The Map Kinase P38SB216995		9e-10
3k3j_A	362	P38alpha Bound To Novel Dfg-Out Compound Pf-0041612		9e-10
1m7q_A	366	Crystal Structure Of P38 Map Kinase In Complex With		9e-10
3zsg_A	362	X-Ray Structure Of P38alpha Bound To Tak-715 Length		9e-10
2npq_A	367	A Novel Lipid Binding Site In The P38 Alpha Map Kin		9e-10
3gc8_A	370	The Structure Of P38beta C162s In Complex With A Di		9e-10
3odz_X	360	Crystal Structure Of P38alpha Y323r Active Mutant L		9e-10
3coi_A	353	Crystal Structure Of P38delta Kinase Length = 353		9e-10
2baj_A	365	P38alpha Bound To Pyrazolourea Length = 365		9e-10
3od6_X	360	Crystal Structure Of P38alpha Y323t Active Mutant L		9e-10
3hrb_A	359	P38 Kinase Crystal Structure In Complex With Small		9e-10
3hvc_A	362	Crystal Structure Of Human P38alpha Map Kinase Leng		9e-10
3oef_X	360	Crystal Structure Of Y323f Inactive Mutant Of P38al		9e-10
3ody_X	360	Crystal Structure Of P38alpha Y323q Active Mutant L		9e-10
1di9_A	360	The Structure Of P38 Mitogen-Activated Protein Kina		9e-10
4ewq_A	383	Human P38 Alpha Mapk In Complex With A Pyridazine B		1e-09
3k3i_A	350	P38alpha Bound To Novel Dgf-Out Compound Pf-0021595		1e-09
3s3i_A	349	P38 Kinase Crystal Structure In Complex With Small		1e-09
1zzl_A	351	Crystal Structure Of P38 With Triazolopyridine Leng		1e-09
2lgc_A	359	Joint Nmr And X-Ray Refinement Reveals The Structur		1e-09
3nnu_A	354	Crystal Structure Of P38 Alpha In Complex With Dp13		1e-09
2xrw_A	371	Linear Binding Motifs For Jnk And For Calcineurin A		1e-09
3hec_A	348	P38 In Complex With Imatinib Length = 348		1e-09
1ukh_A	369	Structural Basis For The Selective Inhibition Of Jn		1e-09
2xs0_A	386	Linear Binding Motifs For Jnk And For Calcineurin A		1e-09
3eb0_A	383	Crystal Structure Of Cgd4_240 From Cryptosporidium		1e-09
3vum_A	370	Crystal Structure Of A Cysteine-deficient Mutant M7		1e-09
3gp0_A	348	Crystal Structure Of Human Mitogen Activated Protei		1e-09
3vul_A	370	Crystal Structure Of A Cysteine-deficient Mutant M1		1e-09
3r63_A	358	Structure Of Erk2 (Spe) Mutant (S246e) Length = 358		2e-09
3o17_A	370	Crystal Structure Of Jnk1-Alpha1 Isoform Length = 3		2e-09
2fso_X	367	Mitogen Activated Protein Kinase P38alpha (D176a) A		2e-09
2fsl_X	367	Mitogen Activated Protein Kinase P38alpha (D176a+f3		2e-09
3mh2_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		2e-09
2fst_X	367	Mitogen Activated Protein Kinase P38alpha (d176a+f3		2e-09
2g01_A	370	Pyrazoloquinolones As Novel, Selective Jnk1 Inhibit		2e-09
3gcp_A	360	Human P38 Map Kinase In Complex With Sb203580 Lengt		3e-09
1bi8_A	326	Mechanism Of G1 Cyclin Dependent Kinase Inhibition		4e-09
3nup_A	307	Cdk6 (Monomeric) In Complex With Inhibitor Length =		5e-09
1jow_B	308	Crystal Structure Of A Complex Of Human Cdk6 And A		5e-09
3o8p_A	360	Conformational Plasticity Of P38 Map Kinase Dfg Mot		6e-09
3elj_A	369	Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine		7e-09
2qkr_A	313	Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5		8e-09
3niz_A	311	Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5		9e-09
3pze_A	358	Jnk1 In Complex With Inhibitor Length = 358		9e-09
3mh0_A	360	Mutagenesis Of P38 Map Kinase Eshtablishes Key Role		9e-09
3gi3_A	360	Crystal Structure Of A N-Phenyl-N'-Naphthylurea Ana		1e-08
4e7w_A	394	Structure Of Gsk3 From Ustilago Maydis Length = 394		1e-08
3mh1_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		1e-08
3mh3_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		1e-08
3oz6_A	388	Crystal Structure Of Mapk From Cryptosporidium Parv		3e-08
2i6l_A	320	Crystal Structure Of Human Mitogen Activated Protei		4e-08
3mtl_A	324	Crystal Structure Of The Pctaire1 Kinase In Complex		4e-08
2w99_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		4e-08
2w96_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		4e-08
3g33_A	308	Crystal Structure Of Cdk4CYCLIN D3 Length = 308		5e-08
2w9f_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		6e-08
3n9x_A	432	Crystal Structure Of Map Kinase From Plasmodium Ber		3e-07
3qbn_A	281	Structure Of Human Aurora A In Complex With A Diami		5e-07
3e3p_A	360	Glycogen Synthase Kinase From Leishmania Major Leng		5e-07
2z7q_A	321	Crystal Structure Of The N-Terminal Kinase Domain O		5e-07
3nie_A	429	Crystal Structure Of Pf11_0147 Length = 429		5e-07
4eon_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		5e-07
4eom_A	301	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		5e-07
4eoo_A	299	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		6e-07
4eop_A	300	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		6e-07
4eoi_A	299	Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyc		6e-07
1gz8_A	299	Human Cyclin Dependent Kinase 2 Complexed With The		1e-06
4erw_A	306	Cdk2 In Complex With Staurosporine Length = 306		1e-06
3pxf_A	306	Cdk2 In Complex With Two Molecules Of 8-Anilino-1-N		1e-06
3ezr_A	300	Cdk-2 With Indazole Inhibitor 17 Bound At Its Activ		1e-06
1gii_A	298	Human Cyclin Dependent Kinase 2 Complexed With The		1e-06
1oir_A	299	Imidazopyridines: A Potent And Selective Class Of C		1e-06
1h01_A	298	Cdk2 In Complex With A Disubstituted 2, 4-Bis Anili		1e-06
3pj8_A	299	Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]		1e-06
1ob3_A	288	Structure Of P. Falciparum Pfpk5 Length = 288		1e-06
1oit_A	299	Imidazopyridines: A Potent And Selective Class Of C		1e-06
4ic7_A	442	Crystal Structure Of The Erk5 Kinase Domain In Comp		1e-06
2w17_A	299	Cdk2 In Complex With The Imidazole Pyrimidine Amide		1e-06
1fin_A	298	Cyclin A-Cyclin-Dependent Kinase 2 Complex Length =		1e-06
1pf8_A	298	Crystal Structure Of Human Cyclin-dependent Kinase		1e-06
4eok_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		1e-06
1vyw_A	309	Structure Of Cdk2CYCLIN A WITH PNU-292137 Length =		1e-06
4b99_A	398	Crystal Structure Of Mapk7 (Erk5) With Inhibitor Le		1e-06
1h1p_A	303	Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMP		1e-06
4eos_A	300	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		1e-06
2iw6_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A Com		1e-06
2gnj_A	350	Pka Three Fold Mutant Model Of Rho-Kinase With Y-27		1e-06
1ogu_A	302	Structure Of Human Thr160-phospho Cdk2/cyclin A Com		1e-06
2gng_A	350	Protein Kinase A Fivefold Mutant Model Of Rho-Kinas		1e-06
2jgz_A	289	Crystal Structure Of Phospho-Cdk2 In Complex With C		1e-06
4eoj_A	302	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		1e-06
1w98_A	298	The Structural Basis Of Cdk2 Activation By Cyclin E		1e-06
3bht_A	300	Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN		1e-06
2gnf_A	350	Protein Kinase A Fivefold Mutant Model Of Rho-Kinas		1e-06
1jst_A	298	Phosphorylated Cyclin-Dependent Kinase-2 Bound To C		1e-06
3qhr_A	298	Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic		1e-06
1e9h_A	297	Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex		1e-06
2iw8_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82		1e-06
4i3z_A	296	Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNES		1e-06
1qmz_A	299	Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Com		1e-06
2f9g_A	353	Crystal Structure Of Fus3 Phosphorylated On Tyr182		1e-06
4eoq_A	301	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		1e-06
4bcq_A	301	Structure Of Cdk2 In Complex With Cyclin A And A 2-		1e-06
3igo_A	486	Crystal Structure Of Cryptosporidium Parvum Cdpk1,		1e-06
3ama_A	351	Protein Kinase A Sixfold Mutant Model Of Aurora B W		2e-06
2b9f_A	353	Crystal Structure Of Non-Phosphorylated Fus3 Length		2e-06
1v0o_A	288	Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulpho		2e-06
1q61_A	350	Pka Triple Mutant Model Of Pkb Length = 350		2e-06
3fhi_A	350	Crystal Structure Of A Complex Between The Catalyti		2e-06
1j3h_A	350	Crystal Structure Of Apoenzyme Camp-Dependent Prote		2e-06
1v0b_A	288	Crystal Structure Of The T198a Mutant Of Pfpk5 Leng		2e-06
1szm_A	350	Dual Binding Mode Of Bisindolylmaleimide 2 To Prote		2e-06
3l9m_A	351	Crystal Structure Of Pkab3 (Pka Triple Mutant V123a		2e-06
2vo0_A	351	Structure Of Pka-Pkb Chimera Complexed With C-(4-(4		2e-06
2uvy_A	351	Structure Of Pka-pkb Chimera Complexed With Methyl-		2e-06
2jdt_A	351	Structure Of Pka-Pkb Chimera Complexed With Isoquin		2e-06
4aaa_A	331	Crystal Structure Of The Human Cdkl2 Kinase Domain		2e-06
2phk_A	277	The Crystal Structure Of A Phosphorylase Kinase Pep		3e-06
3gbz_A	329	Structure Of The Cmgc Cdk Kinase From Giardia Lambl		3e-06
1phk_A	298	Two Structures Of The Catalytic Domain Of Phosphory		3e-06
1xh9_A	350	Crystal Structures Of Protein Kinase B Selective In		3e-06
2b9h_A	353	Crystal Structure Of Fus3 With A Docking Motif From		3e-06
3mvj_A	371	Human Cyclic Amp-Dependent Protein Kinase Pka Inhib		3e-06
4dg3_E	371	Crystal Structure Of R336a Mutant Of Camp-dependent		3e-06
1svh_A	350	Crystal Structure Of Protein Kinase A In Complex Wi		3e-06
2jds_A	351	Structure Of Camp-Dependent Protein Kinase Complexe		3e-06
1xh7_A	350	Crystal Structures Of Protein Kinase B Selective In		3e-06
4ae9_A	343	Structure And Function Of The Human Sperm-specific		3e-06
3dnd_A	350	Camp-Dependent Protein Kinase Pka Catalytic Subunit		3e-06
2c1a_A	351	Structure Of Camp-Dependent Protein Kinase Complexe		3e-06
4ae6_A	343	Structure And Function Of The Human Sperm-specific		3e-06
2uzt_A	336	Pka Structures Of Akt, Indazole-Pyridine Inhibitors		3e-06
1q8w_A	350	The Catalytic Subunit Of Camp-Dependent Protein Kin		3e-06
3agl_A	351	Complex Of Pka With The Bisubstrate Protein Kinase		3e-06
1cmk_E	350	Crystal Structures Of The Myristylated Catalytic Su		3e-06
1stc_E	350	Camp-Dependent Protein Kinase, Alpha-Catalytic Subu		3e-06
3nx8_A	351	Human Camp Dependent Protein Kinase In Complex With		3e-06
1ctp_E	350	Structure Of The Mammalian Catalytic Subunit Of Cam		3e-06
3pvb_A	345	Crystal Structure Of (73-244)ria:c Holoenzyme Of Ca		3e-06
3agm_A	351	Complex Of Pka With The Bisubstrate Protein Kinase		3e-06
1cdk_A	350	Camp-Dependent Protein Kinase Catalytic Subunit (E.		3e-06
4el9_A	305	Structure Of N-Terminal Kinase Domain Of Rsk2 With		3e-06
3ubd_A	304	Structure Of N-Terminal Domain Of Rsk2 Kinase In Co		3e-06
1ydt_E	350	Structure Of Camp-Dependent Protein Kinase, Alpha-C		3e-06
2f7e_E	351	Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoqu		3e-06
1l3r_E	350	Crystal Structure Of A Transition State Mimic Of Th		3e-06
2qur_A	350	Crystal Structure Of F327aK285P MUTANT OF CAMP-Depe		3e-06
1jbp_E	350	Crystal Structure Of The Catalytic Subunit Of Camp-		3e-06
1apm_E	350	2.0 Angstrom Refined Crystal Structure Of The Catal		3e-06
2qcs_A	350	A Complex Structure Between The Catalytic And Regul		3e-06
1bkx_A	350	A Binary Complex Of The Catalytic Subunit Of Camp-D		3e-06
2erz_E	351	Crystal Structure Of C-amp Dependent Kinase (pka) B		3e-06
3qal_E	350	Crystal Structure Of Arg280ala Mutant Of Catalytic		3e-06
1fmo_E	350	Crystal Structure Of A Polyhistidine-Tagged Recombi		3e-06
2gu8_A	337	Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel		4e-06
4dfx_E	350	Crystal Structure Of Myristoylated K7c Catalytic Su		4e-06
1h4l_A	292	Structure And Regulation Of The Cdk5-P25(Nck5a) Com		4e-06
3g51_A	325	Structural Diversity Of The Active Conformation Of		4e-06
2xru_A	280	Aurora-A T288e Complexed With Pha-828300 Length = 2		4e-06
4dfy_A	371	Crystal Structure Of R194a Mutant Of Camp-Dependent		4e-06
1q24_A	350	Pka Double Mutant Model Of Pkb In Complex With Mgat		6e-06
2wei_A	287	Crystal Structure Of The Kinase Domain Of Cryptospo		6e-06
3dfa_A	286	Crystal Structure Of Kinase Domain Of Calcium-depen		6e-06
3rp9_A	458	Crystal Structure Of The Apo Mapk From Toxoplasma G		6e-06
3nrm_A	283	Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibito		6e-06
1smh_A	350	Protein Kinase A Variant Complex With Completely Or		6e-06
2bmc_A	306	Aurora-2 T287d T288d Complexed With Pha-680632 Leng		7e-06
1syk_A	350	Crystal Structure Of E230q Mutant Of Camp-Dependent		8e-06
3qa8_A	676	Crystal Structure Of Inhibitor Of Kappa B Kinase Be		9e-06
1ung_A	292	Structural Mechanism For The Inhibition Of Cdk5-P25		9e-06
3rzf_A	677	Crystal Structure Of Inhibitor Of Kappab Kinase Bet		9e-06
1ql6_A	298	The Catalytic Mechanism Of Phosphorylase Kinase Pro		9e-06
3com_A	314	Crystal Structure Of Mst1 Kinase Length = 314		1e-05
3db6_A	301	Crystal Structure Of An Activated (Thr->asp) Polo-L		1e-05
3d5v_A	317	Crystal Structure Of An Activated (Thr->asp) Polo-L		1e-05
2c6e_A	283	Aurora A Kinase Activated Mutant (T287d) In Complex		1e-05
2wtv_A	285	Aurora-A Inhibitor Structure Length = 285		1e-05
3o7l_B	350	Crystal Structure Of Phospholamban (1-19):pka C-Sub		1e-05
3lij_A	494	Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820)		1e-05
4agu_A	311	Crystal Structure Of The Human Cdkl1 Kinase Domain		1e-05
3d5u_A	317	Crystal Structure Of A Wildtype Polo-Like Kinase 1		1e-05
3d5w_A	317	Crystal Structure Of A Phosphorylated Polo-Like Kin		1e-05
3unz_A	279	Aurora A In Complex With Rpm1679 Length = 279		1e-05
3fdn_A	279	Structure-Based Drug Design Of Novel Aurora Kinase		1e-05
3lm0_A	327	Crystal Structure Of Human SerineTHREONINE KINASE 1		1e-05
3qam_E	350	Crystal Structure Of Glu208ala Mutant Of Catalytic		2e-05
2y0a_A	326	Structure Of Dapk1 Construct Residues 1-304 Length		2e-05
2j50_A	280	Structure Of Aurora-2 In Complex With Pha-739358 Le		2e-05
3pg1_A	362	Map Kinase Lmampk10 From Leishmania Major (1.95 Ang		2e-05
3uib_A	362	Map Kinase Lmampk10 From Leishmania Major In Comple		2e-05
2x6d_A	285	Aurora-A Bound To An Inhibitor Length = 285		2e-05
2xng_A	283	Structure Of Aurora-A Bound To A Selective Imidazop		2e-05
2wtw_A	285	Aurora-A Inhibitor Structure (2nd Crystal Form) Len		2e-05
3dak_A	290	Crystal Structure Of Domain-Swapped Osr1 Kinase Dom		2e-05
2vwi_A	303	Structure Of The Osr1 Kinase, A Hypertension Drug T		2e-05
2w4k_A	302	X-Ray Structure Of A Dap-Kinase 2-302 Length = 302		2e-05
1ol5_A	282	Structure Of Aurora-A 122-403, Phosphorylated On Th		2e-05
2j4z_A	306	Structure Of Aurora-2 In Complex With Pha-680626 Le		2e-05
2xzs_A	312	Death Associated Protein Kinase 1 Residues 1-312 Le		2e-05
2dwb_A	285	Aurora-A Kinase Complexed With Amppnp Length = 285		3e-05
1muo_A	297	Crystal Structure Of Aurora-2, An Oncogenic Serine-		3e-05
3pwy_A	311	Crystal Structure Of An Extender (Spd28345)-Modifie		3e-05
2ou7_A	335	Structure Of The Catalytic Domain Of Human Polo-Lik		3e-05
3thb_A	333	Structure Of Plk1 Kinase Domain In Complex With A B		3e-05
3zrk_A	371	Identification Of 2-(4-Pyridyl)thienopyridinones As		3e-05
4afj_A	367	5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selec		3e-05
2v5q_A	315	Crystal Structure Of Wild-type Plk-1 Kinase Domain		3e-05
4dit_A	382	Crystal Structure Of Gsk3beta In Complex With A Imi		3e-05
3kb7_A	311	Crystal Structure Of Polo-Like Kinase 1 In Complex		3e-05
2yac_A	311	Crystal Structure Of Polo-Like Kinase 1 In Complex		3e-05
1gng_A	378	Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With		3e-05
3zdi_A	350	Glycogen Synthase Kinase 3 Beta Complexed With Axin		3e-05
3f7z_A	350	X-ray Co-crystal Structure Of Glycogen Synthase Kin		3e-05
3f88_A	349	Glycogen Synthase Kinase 3beta Inhibitor Complex Le		3e-05
3say_A	430	Crystal Structure Of Human Glycogen Synthase Kinase		3e-05
1o9u_A	350	Glycogen Synthase Kinase 3 Beta Complexed With Axin		3e-05
2ow3_A	352	Glycogen Synthase Kinase-3 Beta In Complex With Bis		3e-05
3lau_A	287	Crystal Structure Of Aurora2 Kinase In Complex With		3e-05
3gb2_A	353	Gsk3beta Inhibitor Complex Length = 353		4e-05
2x0g_A	334	X-ray Structure Of A Dap-kinase Calmodulin Complex		4e-05
2rku_A	294	Structure Of Plk1 In Complex With Bi2536 Length = 2		4e-05
1q5k_A	414	Crystal Structure Of Glycogen Synthase Kinase 3 In		4e-05
2c6d_A	275	Aurora A Kinase Activated Mutant (T287d) In Complex		4e-05
2o5k_A	372	Crystal Structure Of Gsk3beta In Complex With A Ben		4e-05
1q3d_A	424	Gsk-3 Beta Complexed With Staurosporine Length = 42		4e-05
1r0e_A	391	Glycogen Synthase Kinase-3 Beta In Complex With 3-I		4e-05
4acc_A	465	Gsk3b In Complex With Inhibitor Length = 465		4e-05
1uv5_A	350	Glycogen Synthase Kinase 3 Beta Complexed With 6-Br		4e-05
3sd0_A	350	Identification Of A Glycogen Synthase Kinase-3b Inh		4e-05
1i09_A	420	Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Len		4e-05
1h8f_A	352	Glycogen Synthase Kinase 3 Beta. Length = 352		4e-05
1pyx_A	422	Gsk-3 Beta Complexed With Amp-Pnp Length = 422		4e-05
2yak_A	285	Structure Of Death-Associated Protein Kinase 1 (Dap		4e-05
1rdq_E	350	Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of		4e-05
3coh_A	268	Crystal Structure Of Aurora-A In Complex With A Pen		5e-05
3gu8_A	295	Crystal Structure Of Dapkl93g With N6-Cyclopentylad		5e-05
1kob_A	387	Twitchin Kinase Fragment (Aplysia), Autoregulated P		5e-05
1ig1_A	294	1.8a X-Ray Structure Of Ternary Complex Of A Cataly		5e-05
3dfc_B	295	Crystal Structure Of A Glycine-Rich Loop Mutant Of		5e-05
3f5u_A	295	Crystal Structure Of The Death Associated Protein K		5e-05
3gu4_A	295	Crystal Structure Of Dapkq23v-Amppnp Length = 295		6e-05
1p4f_A	293	Death Associated Protein Kinase Catalytic Domain Wi		6e-05
1ua2_A	346	Crystal Structure Of Human Cdk7 Length = 346		6e-05
2w4j_A	277	X-Ray Structure Of A Dap-Kinase 2-277 Length = 277		6e-05
1wvw_A	278	Crystal Structures Of Kinase Domain Of Dap Kinase I		6e-05
1ol6_A	282	Structure Of Unphosphorylated D274n Mutant Of Auror		7e-05
2xuu_A	334	Crystal Structure Of A Dap-Kinase 1 Mutant Length =		7e-05
2f57_A	317	Crystal Structure Of The Human P21-activated Kinase		7e-05
4a07_A	311	Human Pdk1 Kinase Domain In Complex With Allosteric		9e-05
2clq_A	295	Structure Of Mitogen-Activated Protein Kinase Kinas		9e-05
1yhv_A	297	Crystal Structure Of Pak1 Kinase Domain With Two Po		1e-04
3vw6_A	269	Crystal Structure Of Human Apoptosis Signal-Regulat		1e-04
3nax_A	311	Pdk1 In Complex With Inhibitor Mp7 Length = 311		1e-04
2r7b_A	312	Crystal Structure Of The Phosphoinositide-Dependent		1e-04
3r21_A	271	Design, Synthesis, And Biological Evaluation Of Pyr		1e-04
3nun_A	292	Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lea		1e-04
3rwp_A	311	Discovery Of A Novel, Potent And Selective Inhibito		1e-04
3iop_A	312	Pdk-1 In Complex With The Inhibitor Compound-8i Len		1e-04
3nay_A	311	Pdk1 In Complex With Inhibitor Mp6 Length = 311		1e-04
3hrc_A	311	Crystal Structure Of A Mutant Of Human Pdk1 Kinase		1e-04
1uu3_A	310	Structure Of Human Pdk1 Kinase Domain In Complex Wi		1e-04
3sc1_A	311	Novel Isoquinolone Pdk1 Inhibitors Discovered Throu		1e-04
2xch_A	309	Crystal Structure Of Pdk1 In Complex With A Pyrazol		1e-04
3h9o_A	311	Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1)		1e-04
1z5m_A	286	Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrr		1e-04
2xck_A	309	Crystal Structure Of Pdk1 In Complex With A Pyrazol		1e-04
2biy_A	310	Structure Of Pdk1-S241a Mutant Kinase Domain Length		1e-04
1h1w_A	289	High Resolution Crystal Structure Of The Human Pdk1		1e-04
3nus_A	286	Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fra		1e-04
1uu9_A	286	Structure Of Human Pdk1 Kinase Domain In Complex Wi		1e-04
3qc4_A	314	Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length =		1e-04
2jed_A	352	The Crystal Structure Of The Kinase Domain Of The P		1e-04
3orx_A	316	Pdk1 Mutant Bound To Allosteric Disulfide Fragment		2e-04
3h0y_A	268	Aurora A In Complex With A Bisanilinopyrimidine Len		2e-04
3cqu_A	342	Crystal Structure Of Akt-1 Complexed With Substrate		2e-04
3ocb_A	341	Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor		2e-04
4gv1_A	340	Pkb Alpha In Complex With Azd5363 Length = 340		2e-04
2c30_A	321	Crystal Structure Of The Human P21-Activated Kinase		2e-04
2xik_A	294	Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related K		2e-04
3q4z_A	306	Structure Of Unphosphorylated Pak1 Kinase Domain Le		2e-04
3q52_A	306	Structure Of Phosphorylated Pak1 Kinase Domain Leng		2e-04
3fxz_A	297	Crystal Structure Of Pak1 Kinase Domain With Ruthen		2e-04
1f3m_C	297	Crystal Structure Of Human SerineTHREONINE KINASE P		2e-04
1fot_A	318	Structure Of The Unliganded Camp-Dependent Protein		3e-04
4fr4_A	384	Crystal Structure Of Human SerineTHREONINE-Protein		3e-04
1mq4_A	272	Crystal Structure Of Aurora-A Protein Kinase Length		3e-04
3ha6_A	268	Crystal Structure Of Aurora A In Complex With Tpx2		3e-04
4fg9_A	320	Crystal Structure Of Human Calcium/calmodulin-depen		3e-04
3e5a_A	268	Crystal Structure Of Aurora A In Complex With Vx-68		4e-04
4fg8_A	315	Crystal Structure Of Human Calcium/calmodulin-depen		4e-04
2w1d_A	275	Structure Determination Of Aurora Kinase In Complex		4e-04
2w1c_A	275	Structure Determination Of Aurora Kinase In Complex		4e-04
1a06_A	332	Calmodulin-Dependent Protein Kinase From Rat Length		4e-04
2wqe_A	262	Structure Of S155r Aurora-A Somatic Mutant Length =		4e-04
3a62_A	327	Crystal Structure Of Phosphorylated P70s6k1 Length		4e-04
3a60_A	327	Crystal Structure Of Unphosphorylated P70s6k1 (Form		4e-04
3o50_A	267	Crystal Structure Of Benzamide 9 Bound To Auroraa L		4e-04
1xjd_A	345	Crystal Structure Of Pkc-Theta Complexed With Staur		5e-04
2y7j_A	365	Structure Of Human Phosphorylase Kinase, Gamma 2 Le		7e-04
4dgm_A	326	Crystal Structure Of Maize Ck2 In Complex With The		8e-04
3kxg_A	327	Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subun		8e-04
3pvg_A	331	Crystal Structure Of Z. Mays Ck2 Alpha Subunit In C		9e-04
4dgn_A	326	Crystal Structure Of Maize Ck2 In Complex With The		9e-04
4bc6_A	293	Crystal Structure Of Human Serine Threonine Kinase-		9e-04
1daw_A	327	Crystal Structure Of A Binary Complex Of Protein Ki		9e-04

>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its Substrate AsfSF2 Length = 381

Iteration: 1
 Score =  203 bits (516), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 92/188 (48%), Positives = 131/188 (69%), Gaps = 1/188 (0%)
Query: 19  ISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRA 78
           +S   A+ G   L  P    +   ++ K+ D GNAC  +K F E+IQTRQYR+ EV++ +
Sbjct: 194 VSTAPATAGNF-LVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIGS 252
Query: 79  GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQ 138
           GY+   D+WS AC AFELATGD LF P SG+ +  DEDH+AL++EL+GK+PRK+ + G  
Sbjct: 253 GYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKY 312
Query: 139 SKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQ 198
           SK++F + GDLK I +LK W L  +LV+KY +S+ +A  F +FL+P+L+  PEKR TA +
Sbjct: 313 SKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAE 372
Query: 199 CLQHPWLS 206
           CL+HPWL+
Sbjct: 373 CLRHPWLN 380

>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide Length = 397

Iteration: 1
 Score =  203 bits (516), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 92/188 (48%), Positives = 131/188 (69%), Gaps = 1/188 (0%)
Query: 19  ISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRA 78
           +S   A+ G   L  P    +   ++ K+ D GNAC  +K F E+IQTRQYR+ EV++ +
Sbjct: 210 VSTAPATAGNF-LVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIGS 268
Query: 79  GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQ 138
           GY+   D+WS AC AFELATGD LF P SG+ +  DEDH+AL++EL+GK+PRK+ + G  
Sbjct: 269 GYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKY 328
Query: 139 SKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQ 198
           SK++F + GDLK I +LK W L  +LV+KY +S+ +A  F +FL+P+L+  PEKR TA +
Sbjct: 329 SKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAE 388
Query: 199 CLQHPWLS 206
           CL+HPWL+
Sbjct: 389 CLRHPWLN 396

>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific Kinase 2 (Srpk2) Bound To Purvalanol B Length = 389

Iteration: 1
 Score =  198 bits (503), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 86/164 (52%), Positives = 121/164 (73%)
Query: 43  MRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDML 102
           +R K+ D GNAC  +K F E+IQTRQYR+ EV++ AGYS   D+WS AC AFELATGD L
Sbjct: 225 IRVKIADLGNACWVHKHFTEDIQTRQYRSIEVLIGAGYSTPADIWSTACMAFELATGDYL 284
Query: 103 FAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDR 162
           F P SG+ +  DEDH+A ++EL+G +PR  A+ G  S+++F+R G+L+ I +LK WSL  
Sbjct: 285 FEPHSGEDYSRDEDHIAHIIELLGSIPRHFALSGKYSREFFNRRGELRHITKLKPWSLFD 344
Query: 163 LLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLS 206
           +LV+KY +   DA +F +FL+P+L+  PEKR +A +CL+HPWL+
Sbjct: 345 VLVEKYGWPHEDAAQFTDFLIPMLEMVPEKRASAGECLRHPWLN 388

>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With Bound Adp Length = 373

Iteration: 1
 Score =  164 bits (414), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 69/163 (42%), Positives = 107/163 (65%)
Query: 43  MRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDML 102
           ++ K+ D GNAC  ++ +   IQTR+YR+PEV+L A +    D+WS AC  FEL TGD L
Sbjct: 175 IQIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFL 234
Query: 103 FAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDR 162
           F P  G  + +D+DH+A ++EL+G++P  +   G  ++ +F+  G L+ I +LKFW L+ 
Sbjct: 235 FEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLED 294
Query: 163 LLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 205
           +L +KY+FS+ +A+E ++FL P+L   P KR  A   + HPWL
Sbjct: 295 VLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWL 337

>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase In Yeast Length = 373

Iteration: 1
 Score =  164 bits (414), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 69/163 (42%), Positives = 107/163 (65%)
Query: 43  MRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDML 102
           ++ K+ D GNAC  ++ +   IQTR+YR+PEV+L A +    D+WS AC  FEL TGD L
Sbjct: 175 IQIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFL 234
Query: 103 FAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDR 162
           F P  G  + +D+DH+A ++EL+G++P  +   G  ++ +F+  G L+ I +LKFW L+ 
Sbjct: 235 FEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLED 294
Query: 163 LLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 205
           +L +KY+FS+ +A+E ++FL P+L   P KR  A   + HPWL
Sbjct: 295 VLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWL 337

>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex With An Indirubin Ligand Length = 429

Iteration: 1
 Score = 85.9 bits (211), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 69/212 (32%), Positives = 101/212 (47%), Gaps = 30/212 (14%)
Query: 33  KPERCLDGIDMRC--KVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFA 90
           KPE  L     R   KV+DFG++C  +++    IQ+R YRAPEVIL A Y   +DMWS  
Sbjct: 227 KPENILLKQQGRSGIKVIDFGSSCYEHQRVYTXIQSRFYRAPEVILGARYGMPIDMWSLG 286
Query: 91  CTAFELATGDMLFAPKSGQGFCEDE-DHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDL 149
           C   EL TG  L          EDE D LA M+EL+G   +K+     ++K++    G  
Sbjct: 287 CILAELLTGYPLLP-------GEDEGDQLACMIELLGMPSQKLLDASKRAKNFVSXKG-Y 338
Query: 150 KRIRRLKFWSLDRLLVDKYRF------SETDARE------------FAEFLVPLLDFTPE 191
            R   +   S   ++++  R          ++RE            F +FL   L++ P 
Sbjct: 339 PRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPA 398
Query: 192 KRPTAQQCLQHPWLSLRNSTRDETKNKSNVEK 223
            R T  Q L+HPWL  R   +  T  K++V++
Sbjct: 399 VRMTPGQALRHPWLR-RRLPKPPTGEKTSVKR 429

>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine Phosphorylation Regulated Kinase 2 (Dyrk2) Length = 429

Iteration: 1
 Score = 85.9 bits (211), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 69/212 (32%), Positives = 101/212 (47%), Gaps = 30/212 (14%)
Query: 33  KPERCLDGIDMRC--KVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFA 90
           KPE  L     R   KV+DFG++C  +++    IQ+R YRAPEVIL A Y   +DMWS  
Sbjct: 227 KPENILLKQQGRSGIKVIDFGSSCYEHQRVYXXIQSRFYRAPEVILGARYGMPIDMWSLG 286
Query: 91  CTAFELATGDMLFAPKSGQGFCEDE-DHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDL 149
           C   EL TG  L          EDE D LA M+EL+G   +K+     ++K++    G  
Sbjct: 287 CILAELLTGYPLLP-------GEDEGDQLACMIELLGMPXQKLLDASKRAKNFVSXKG-Y 338
Query: 150 KRIRRLKFWSLDRLLVDKYRF------SETDARE------------FAEFLVPLLDFTPE 191
            R   +   S   ++++  R          ++RE            F +FL   L++ P 
Sbjct: 339 PRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPA 398
Query: 192 KRPTAQQCLQHPWLSLRNSTRDETKNKSNVEK 223
            R T  Q L+HPWL  R   +  T  K++V++
Sbjct: 399 VRMTPGQALRHPWLR-RRLPKPPTGEKTSVKR 429

>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41 Length = 417

Iteration: 1
 Score = 84.7 bits (208), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 65/196 (33%), Positives = 93/196 (47%), Gaps = 27/196 (13%)
Query: 33  KPERCLDGIDMRC--KVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFA 90
           KPE  L     R   KV+DFG++C  +++    IQ+R YRAPEVIL A Y   +DMWS  
Sbjct: 227 KPENILLKQQGRSGIKVIDFGSSCYEHQRVYTXIQSRFYRAPEVILGARYGMPIDMWSLG 286
Query: 91  CTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLK 150
           C   EL TG  L  P   +G     D LA M+EL+G   +K+     ++K++    G   
Sbjct: 287 CILAELLTGYPLL-PGEDEG-----DQLACMIELLGMPSQKLLDASKRAKNFVSXKG-YP 339
Query: 151 RIRRLKFWSLDRLLVDKYRF------SETDARE------------FAEFLVPLLDFTPEK 192
           R   +   S   ++++  R          ++RE            F +FL   L++ P  
Sbjct: 340 RYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAV 399
Query: 193 RPTAQQCLQHPWLSLR 208
           R T  Q L+HPWL  R
Sbjct: 400 RMTPGQALRHPWLRRR 415

>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With 10z-Hymenialdisine Length = 339

Iteration: 1
 Score = 82.0 bits (201), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 54/196 (27%), Positives = 94/196 (47%), Gaps = 42/196 (21%)
Query: 30  ELPKPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSF 89
           ++ + ER L   D+  KVVDFG+A   ++  +  + TR YRAPEVIL  G+S   D+WS 
Sbjct: 163 KIKRDERTLINPDI--KVVDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSI 220
Query: 90  ACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDL 149
            C   E   G  +F         + ++HLA+M  ++G +P+ +                +
Sbjct: 221 GCILIEYYLGFTVFPTH------DSKEHLAMMERILGPLPKHM----------------I 258
Query: 150 KRIRRLKFWSLDRLLVDKY----RFSETDAREFAEFLVP--------------LLDFTPE 191
           ++ R+ K++  DRL  D++    R+     +   EF++               +L++ P 
Sbjct: 259 QKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPA 318
Query: 192 KRPTAQQCLQHPWLSL 207
           KR T ++ L+HP+  L
Sbjct: 319 KRITLREALKHPFFDL 334

>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2) Length = 368

Iteration: 1
 Score = 82.0 bits (201), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 55/186 (29%), Positives = 89/186 (47%), Gaps = 20/186 (10%)
Query: 28  GIELPKPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMW 87
            +E  + ER +    +R  VVDFG+A   ++  +  + TR YRAPEVIL  G+S   D+W
Sbjct: 180 NLEKKRDERSVKSTAVR--VVDFGSATFDHEHHSTIVSTRHYRAPEVILELGWSQPCDVW 237
Query: 88  SFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYF---- 143
           S  C  FE   G  LF         ++ +HLA+M  ++G +P ++ I   + + YF    
Sbjct: 238 SIGCIIFEYYVGFTLFQTH------DNREHLAMMERILGPIPSRM-IRKTRKQKYFYRGR 290
Query: 144 ---DRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCL 200
              D +    R  R     L R L  +      +  +  + +  +L++ P KR T  + L
Sbjct: 291 LDWDENTSAGRYVRENCKPLRRYLTSE----AEEHHQLFDLIESMLEYEPAKRLTLGEAL 346
Query: 201 QHPWLS 206
           QHP+ +
Sbjct: 347 QHPFFA 352

>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain Length = 360

Iteration: 1
 Score = 80.1 bits (196), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 61/195 (31%), Positives = 96/195 (49%), Gaps = 23/195 (11%)
Query: 19  ISIRRASMGG-IELPKPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILR 77
           I++RR + G  I++ + +    GI    K++DFG A   +      I TRQYRAPEVIL 
Sbjct: 180 ITVRRVTDGKKIQIYRTKST--GI----KLIDFGCATFKSDYHGSIINTRQYRAPEVILN 233
Query: 78  AGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGA 137
            G+  S DMWSF C   EL TG +LF         E  +HLA+M  +I  +P+ +     
Sbjct: 234 LGWDVSSDMWSFGCVLAELYTGSLLFRTH------EHMEHLAMMESIIQPIPKNMLYEAT 287
Query: 138 QSK--DYFDRHGDLKRIRRLKFWSLDRLLVDK-----YRFSETDAREFAEFLVPLLDFTP 190
           ++    Y ++  +LK        S++ +   K     Y+  + +   F +FL  +L   P
Sbjct: 288 KTNGSKYVNK-DELKLAWPENASSINSIKHVKKCLPLYKIIKHEL--FCDFLYSILQIDP 344
Query: 191 EKRPTAQQCLQHPWL 205
             RP+  + L+H +L
Sbjct: 345 TLRPSPAELLKHKFL 359

>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In Complex With A Novel Substituted Indole Inhibitor Length = 339

Iteration: 1
 Score = 79.7 bits (195), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 53/196 (27%), Positives = 93/196 (47%), Gaps = 42/196 (21%)
Query: 30  ELPKPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSF 89
           ++ + ER L   D+  KVVDFG+A   ++  +  +  R YRAPEVIL  G+S   D+WS 
Sbjct: 163 KIKRDERTLINPDI--KVVDFGSATYDDEHHSTLVXXRHYRAPEVILALGWSQPCDVWSI 220
Query: 90  ACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDL 149
            C   E   G  +F         + ++HLA+M  ++G +P+ +                +
Sbjct: 221 GCILIEYYLGFTVFPTH------DSKEHLAMMERILGPLPKHM----------------I 258
Query: 150 KRIRRLKFWSLDRLLVDKY----RFSETDAREFAEFLVP--------------LLDFTPE 191
           ++ R+ K++  DRL  D++    R+     +   EF++               +L++ P 
Sbjct: 259 QKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPA 318
Query: 192 KRPTAQQCLQHPWLSL 207
           KR T ++ L+HP+  L
Sbjct: 319 KRITLREALKHPFFDL 334

>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX Length = 368

Iteration: 1
 Score = 76.3 bits (186), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 55/196 (28%), Positives = 93/196 (47%), Gaps = 31/196 (15%)
Query: 46  KVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAP 105
           K+VDFG++C+  ++  + IQ+R YR+PEV+L   Y  ++DMWS  C   E+ TG+ LF  
Sbjct: 182 KIVDFGSSCQLGQRIYQXIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLF-- 239
Query: 106 KSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGD----LKRIRRLK----- 156
            SG     + D +  ++E++G  P  I     +++ +F++  D    LK+ +  K     
Sbjct: 240 -SG---ANEVDQMNKIVEVLGIPPAHILDQAPKARKFFEKLPDGTWNLKKTKDGKREYKP 295
Query: 157 --FWSLDRLL-----------VDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHP 203
                L  +L             +   +  D  +F + ++ +LD+ P+ R      LQH 
Sbjct: 296 PGTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQH- 354
Query: 204 WLSLRNSTRDETKNKS 219
             S    T DE  N S
Sbjct: 355 --SFFKKTADEGTNTS 368

>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41 Length = 382

Iteration: 1
 Score = 73.6 bits (179), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 53/191 (27%), Positives = 91/191 (47%), Gaps = 31/191 (16%)
Query: 46  KVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAP 105
           K+VDFG++C+  ++  + IQ+R YR+PEV+L   Y  ++DMWS  C   E+ TG+ LF  
Sbjct: 201 KIVDFGSSCQLGQRIYQXIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLF-- 258
Query: 106 KSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGD----LKRIRRLK----- 156
            SG     + D +  ++E++G  P  I     +++ +F++  D    LK+ +  K     
Sbjct: 259 -SG---ANEVDQMNKIVEVLGIPPAHILDQAPKARKFFEKLPDGTWNLKKTKDGKREYKP 314
Query: 157 --FWSLDRLL-----------VDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHP 203
                L  +L             +   +  D  +F + ++ +LD+ P+ R      LQH 
Sbjct: 315 PGTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQH- 373
Query: 204 WLSLRNSTRDE 214
             S    T DE
Sbjct: 374 --SFFKKTADE 382

>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine- Phosphorylation-Regulated Kinase 1a Length = 382

Iteration: 1
 Score = 73.6 bits (179), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 53/191 (27%), Positives = 91/191 (47%), Gaps = 31/191 (16%)
Query: 46  KVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAP 105
           K+VDFG++C+  ++  + IQ+R YR+PEV+L   Y  ++DMWS  C   E+ TG+ LF  
Sbjct: 201 KIVDFGSSCQLGQRIYQXIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLF-- 258
Query: 106 KSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGD----LKRIRRLK----- 156
            SG     + D +  ++E++G  P  I     +++ +F++  D    LK+ +  K     
Sbjct: 259 -SG---ANEVDQMNKIVEVLGIPPAHILDQAPKARKFFEKLPDGTWNLKKTKDGKREYKP 314
Query: 157 --FWSLDRLL-----------VDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHP 203
                L  +L             +   +  D  +F + ++ +LD+ P+ R      LQH 
Sbjct: 315 PGTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQH- 373
Query: 204 WLSLRNSTRDE 214
             S    T DE
Sbjct: 374 --SFFKKTADE 382

>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki Length = 381

Iteration: 1
 Score = 68.2 bits (165), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 48/182 (26%), Positives = 77/182 (42%), Gaps = 46/182 (25%)
Query: 46  KVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAP 105
           +V DFG+A   ++     + TR YR PEVIL  G++   D+WS  C  FE   G  LF  
Sbjct: 214 RVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQT 273
Query: 106 KSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLV 165
                  E+ +HL +M +++G +P  +                + R R+ K++    L+ 
Sbjct: 274 H------ENREHLVMMEKILGPIPSHM----------------IHRTRKQKYFYKGGLVW 311
Query: 166 DKYRFSETDAREFAEFLVPL---------------------LDFTPEKRPTAQQCLQHPW 204
           D+   + +D R   E   PL                     L+F P +R T  + L HP+
Sbjct: 312 DE---NSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALLHPF 368
Query: 205 LS 206
            +
Sbjct: 369 FA 370

>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3 Length = 357

Iteration: 1
 Score = 67.8 bits (164), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 48/182 (26%), Positives = 77/182 (42%), Gaps = 46/182 (25%)
Query: 46  KVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAP 105
           +V DFG+A   ++     + TR YR PEVIL  G++   D+WS  C  FE   G  LF  
Sbjct: 191 RVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQT 250
Query: 106 KSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLV 165
                  E+ +HL +M +++G +P  +                + R R+ K++    L+ 
Sbjct: 251 H------ENREHLVMMEKILGPIPSHM----------------IHRTRKQKYFYKGGLVW 288
Query: 166 DKYRFSETDAREFAEFLVPL---------------------LDFTPEKRPTAQQCLQHPW 204
           D+   + +D R   E   PL                     L+F P +R T  + L HP+
Sbjct: 289 DE---NSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALLHPF 345
Query: 205 LS 206
            +
Sbjct: 346 FA 347

>pdb|2EU9|A Chain A, Crystal Structure Of Clk3 Length = 355

Iteration: 1
 Score = 67.8 bits (164), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 48/182 (26%), Positives = 77/182 (42%), Gaps = 46/182 (25%)
Query: 46  KVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAP 105
           +V DFG+A   ++     + TR YR PEVIL  G++   D+WS  C  FE   G  LF  
Sbjct: 182 RVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQT 241
Query: 106 KSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLV 165
                  E+ +HL +M +++G +P  +                + R R+ K++    L+ 
Sbjct: 242 H------ENREHLVMMEKILGPIPSHM----------------IHRTRKQKYFYKGGLVW 279
Query: 166 DKYRFSETDAREFAEFLVPL---------------------LDFTPEKRPTAQQCLQHPW 204
           D+   + +D R   E   PL                     L+F P +R T  + L HP+
Sbjct: 280 DE---NSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALLHPF 336
Query: 205 LS 206
            +
Sbjct: 337 FA 338

>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma Length = 367

Iteration: 1
 Score = 66.6 bits (161), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 58/195 (29%), Positives = 87/195 (44%), Gaps = 24/195 (12%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWSFAC 91
           KP       D   K++DFG A +A+ +    + TR YRAPEVIL    Y+ +VD+WS  C
Sbjct: 155 KPGNLAVNEDCELKILDFGLARQADSEMXGXVVTRWYRAPEVILNWMRYTQTVDIWSVGC 214
Query: 92  TAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKR 151
              E+ TG  LF         +  D L  +M++ G  P +  +   QS +  +    L  
Sbjct: 215 IMAEMITGKTLFKG------SDHLDQLKEIMKVTGTPPAEF-VQRLQSDEAKNYMKGLPE 267
Query: 152 IRRLKFWSLDRLLVDKYRFSETDAREFA-EFLVPLLDFTPEKRPTAQQCLQHPWLSLRNS 210
           + +  F S+            T+A   A   L  +L    E+R TA + L HP+    + 
Sbjct: 268 LEKKDFASI-----------LTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLHD 316
Query: 211 TRDETKNKSNVEKVD 225
           T DE +    V+K D
Sbjct: 317 TEDEPQ----VQKYD 327

>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase Erk1 Length = 382

Iteration: 1
 Score = 63.9 bits (154), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 53/195 (27%), Positives = 88/195 (45%), Gaps = 36/195 (18%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQ------FAEEIQTRQYRAPEVILRA-GYSFSVD 85
           KP   L       K+ DFG A  A+ +        E + TR YRAPE++L + GY+ S+D
Sbjct: 171 KPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIMLNSKGYTKSID 230
Query: 86  MWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDR 145
           +WS  C   E+ +   +F    G+ + +  +H+             + I G+ S++    
Sbjct: 231 IWSVGCILAEMLSNRPIFP---GKHYLDQLNHI-------------LGILGSPSQE---- 270
Query: 146 HGDLKRIRRLKFWSLDRLLVDKYR------FSETDAREFAEFLVPLLDFTPEKRPTAQQC 199
             DL  I  +K  +  + L  K +      F ++D++   + L  +L F P KR T ++ 
Sbjct: 271 --DLNCIINMKARNYLQSLPSKTKVAWAKLFPKSDSKAL-DLLDRMLTFNPNKRITVEEA 327
Query: 200 LQHPWLSLRNSTRDE 214
           L HP+L       DE
Sbjct: 328 LAHPYLEQYYDPTDE 342

>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha Length = 389

Iteration: 1
 Score = 63.9 bits (154), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 52/190 (27%), Positives = 82/190 (43%), Gaps = 24/190 (12%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWSFAC 91
           KP       D   K++DFG A   + +    + TR YRAPE++L    Y+ +VD+WS  C
Sbjct: 181 KPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNMTVDIWSVGC 240
Query: 92  TAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIA--IGGAQSKDYFDRHGDL 149
              EL TG  LF         +  + L  +M L G  P  +   +   ++++Y +    +
Sbjct: 241 IMAELLTGRTLFPG------TDHINQLQQIMRLTGTPPASVISRMPSHEARNYINSLPQM 294
Query: 150 -KRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLR 208
            KR     F   + L VD               L  +L    +KR TA + L HP+ S  
Sbjct: 295 PKRNFADVFIGANPLAVD--------------LLEKMLVLDTDKRITASEALAHPYFSQY 340
Query: 209 NSTRDETKNK 218
           +   DE +++
Sbjct: 341 HDPDDEPESE 350

>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol Length = 360

Iteration: 1
 Score = 63.5 bits (153), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 54/195 (27%), Positives = 83/195 (42%), Gaps = 36/195 (18%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQ------FAEEIQTRQYRAPEVILRA-GYSFSVD 85
           KP   L       K+ DFG A  A+          E + TR YRAPE++L + GY+ S+D
Sbjct: 151 KPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSID 210
Query: 86  MWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDR 145
           +WS  C   E+ +   +F    G+ + +  +H+             + I G+ S++    
Sbjct: 211 IWSVGCILAEMLSNRPIFP---GKHYLDQLNHI-------------LGILGSPSQE---- 250
Query: 146 HGDLKRIRRLKFWSLDRLLVDKYR------FSETDAREFAEFLVPLLDFTPEKRPTAQQC 199
             DL  I  LK  +    L  K +      F   D++   + L  +L F P KR   +Q 
Sbjct: 251 --DLNXIINLKARNYLLSLPHKNKVPWNRLFPNADSKAL-DLLDKMLTFNPHKRIEVEQA 307
Query: 200 LQHPWLSLRNSTRDE 214
           L HP+L       DE
Sbjct: 308 LAHPYLEQYYDPSDE 322

>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94 Length = 360

Iteration: 1
 Score = 63.2 bits (152), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 54/195 (27%), Positives = 83/195 (42%), Gaps = 36/195 (18%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQ------FAEEIQTRQYRAPEVILRA-GYSFSVD 85
           KP   L       K+ DFG A  A+          E + TR YRAPE++L + GY+ S+D
Sbjct: 151 KPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSID 210
Query: 86  MWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDR 145
           +WS  C   E+ +   +F    G+ + +  +H+             + I G+ S++    
Sbjct: 211 IWSVGCILAEMLSNRPIFP---GKHYLDQLNHI-------------LGILGSPSQE---- 250
Query: 146 HGDLKRIRRLKFWSLDRLLVDKYR------FSETDAREFAEFLVPLLDFTPEKRPTAQQC 199
             DL  I  LK  +    L  K +      F   D++   + L  +L F P KR   +Q 
Sbjct: 251 --DLNXIINLKARNYLLSLPHKNKVPWNRLFPNADSKAL-DLLDKMLTFNPHKRIEVEQA 307
Query: 200 LQHPWLSLRNSTRDE 214
           L HP+L       DE
Sbjct: 308 LAHPYLEQYYDPSDE 322

>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 63.2 bits (152), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 51/187 (27%), Positives = 84/187 (44%), Gaps = 28/187 (14%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQF--AEEIQTRQYRAPEVILRAGYSFSVDMWSFA 90
           KP   +   D   K++DFG A  A   F     + TR YRAPEVIL  GY  +VD+WS  
Sbjct: 153 KPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 212
Query: 91  CTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLK 150
           C   E+  G +LF            DH+    ++I ++       G  S ++  +     
Sbjct: 213 CIMGEMIKGGVLFP---------GTDHIDQWNKVIEQL-------GTPSPEFMKKLQPTV 256
Query: 151 RI---RRLKF--WSLDRLLVDKYRFSETD-----AREFAEFLVPLLDFTPEKRPTAQQCL 200
           R     R K+  +S ++L  D    ++++     A +  + L  +L     KR +  + L
Sbjct: 257 RTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEAL 316
Query: 201 QHPWLSL 207
           QHP++++
Sbjct: 317 QHPYINV 323

>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 62.8 bits (151), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 51/187 (27%), Positives = 84/187 (44%), Gaps = 28/187 (14%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQF--AEEIQTRQYRAPEVILRAGYSFSVDMWSFA 90
           KP   +   D   K++DFG A  A   F     + TR YRAPEVIL  GY  +VD+WS  
Sbjct: 153 KPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 212
Query: 91  CTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLK 150
           C   E+  G +LF            DH+    ++I ++       G  S ++  +     
Sbjct: 213 CIMGEMIKGGVLFP---------GTDHIDQWNKVIEQL-------GTPSPEFMKKLQPTV 256
Query: 151 RI---RRLKF--WSLDRLLVDKYRFSETD-----AREFAEFLVPLLDFTPEKRPTAQQCL 200
           R     R K+  +S ++L  D    ++++     A +  + L  +L     KR +  + L
Sbjct: 257 RTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEAL 316
Query: 201 QHPWLSL 207
           QHP++++
Sbjct: 317 QHPYINV 323

>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 62.8 bits (151), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 51/187 (27%), Positives = 84/187 (44%), Gaps = 28/187 (14%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQF--AEEIQTRQYRAPEVILRAGYSFSVDMWSFA 90
           KP   +   D   K++DFG A  A   F     + TR YRAPEVIL  GY  +VD+WS  
Sbjct: 153 KPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 212
Query: 91  CTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLK 150
           C   E+  G +LF            DH+    ++I ++       G  S ++  +     
Sbjct: 213 CIMGEMIKGGVLFP---------GTDHIDQWNKVIEQL-------GTPSPEFMKKLQPTV 256
Query: 151 RI---RRLKF--WSLDRLLVDKYRFSETD-----AREFAEFLVPLLDFTPEKRPTAQQCL 200
           R     R K+  +S ++L  D    ++++     A +  + L  +L     KR +  + L
Sbjct: 257 RTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEAL 316
Query: 201 QHPWLSL 207
           QHP++++
Sbjct: 317 QHPYINV 323

>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A Natural Jnk1 Inhibitor Length = 379

Iteration: 1
 Score = 62.8 bits (151), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 51/187 (27%), Positives = 84/187 (44%), Gaps = 28/187 (14%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQF--AEEIQTRQYRAPEVILRAGYSFSVDMWSFA 90
           KP   +   D   K++DFG A  A   F    E+ TR YRAPEVIL  GY  +VD+WS  
Sbjct: 153 KPSNIVVKSDCTLKILDFGLARTAGTSFMMTPEVVTRYYRAPEVILGMGYKENVDIWSVG 212
Query: 91  CTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLK 150
           C   E+  G +LF            DH+    ++I ++       G    ++  +     
Sbjct: 213 CIMGEMIKGGVLFP---------GTDHIDQWNKVIEQL-------GTPCPEFMKKLQPTV 256
Query: 151 RI---RRLKF--WSLDRLLVDKYRFSETD-----AREFAEFLVPLLDFTPEKRPTAQQCL 200
           R     R K+  +S ++L  D    ++++     A +  + L  +L     KR +  + L
Sbjct: 257 RTYVENRPKYAGYSFEKLFPDVLFPADSEHNALKASQARDLLSKMLVIDASKRISVDEAL 316
Query: 201 QHPWLSL 207
           QHP++++
Sbjct: 317 QHPYINV 323

>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The Phosphate-responsive Signal Transduction Pathway Length = 317

Iteration: 1
 Score = 62.8 bits (151), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 52/179 (29%), Positives = 82/179 (45%), Gaps = 20/179 (11%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRA----NKQFAEEIQTRQYRAPEVILRA-GYSFSVDMW 87
           KP+  L     + K+ DFG A RA       F+ E+ T  YRAP+V++ +  YS S+D+W
Sbjct: 135 KPQNLLINKRGQLKLGDFGLA-RAFGIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIW 193
Query: 88  SFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHG 147
           S  C   E+ TG  LF          DE+ L L+ +++G  P +           ++ + 
Sbjct: 194 SCGCILAEMITGKPLFPG------TNDEEQLKLIFDIMGT-PNESLWPSVTKLPKYNPNI 246
Query: 148 DLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLS 206
             +  R L      R ++  +     D     +FL  LL   P+ R +A+Q L HPW +
Sbjct: 247 QQRPPRDL------RQVLQPHTKEPLDG-NLMDFLHGLLQLNPDMRLSAKQALHHPWFA 298

>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase Length = 360

Iteration: 1
 Score = 62.4 bits (150), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 52/189 (27%), Positives = 83/189 (43%), Gaps = 30/189 (15%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRA-GYSFSVDMWSFAC 91
           KP       D   K++DFG A   + +    + TR YRAPE++L A  Y+ +VD+WS  C
Sbjct: 152 KPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNAMHYNQTVDIWSVGC 211
Query: 92  TAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKI--AIGGAQSKDYFDRHGDL 149
              EL TG  LF         +  D L L++ L+G    ++   I    +++Y      L
Sbjct: 212 IMAELLTGRTLFPG------TDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ---SL 262
Query: 150 KRIRRLKFWSL----DRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 205
            ++ ++ F ++    + L VD               L  +L    +KR TA Q L H + 
Sbjct: 263 TQMPKMNFANVFIGANPLAVD--------------LLEKMLVLDSDKRITAAQALAHAYF 308
Query: 206 SLRNSTRDE 214
           +  +   DE
Sbjct: 309 AQYHDPDDE 317

>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737 Length = 364

Iteration: 1
 Score = 62.4 bits (150), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 49/178 (27%), Positives = 78/178 (43%), Gaps = 10/178 (5%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQF--AEEIQTRQYRAPEVILRAGYSFSVDMWSFA 90
           KP   +   D   K++DFG A  A   F     + TR YRAPEVIL  GY  +VD+WS  
Sbjct: 153 KPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 212
Query: 91  CTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGK-MPRKIAIGGAQSKDYFDRHGDL 149
           C   E+    +LF    G+ +    D    ++E +G   P  +       ++Y +     
Sbjct: 213 CIMGEMVRHKILFP---GRDYI---DQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKY 266
Query: 150 KRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSL 207
             +   K +  D L       ++  A +  + L  +L   P KR +    LQHP++++
Sbjct: 267 AGLTFPKLFP-DSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINV 323

>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 62.4 bits (150), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 51/187 (27%), Positives = 84/187 (44%), Gaps = 28/187 (14%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQF--AEEIQTRQYRAPEVILRAGYSFSVDMWSFA 90
           KP   +   D   K++DFG A  A   F     + TR YRAPEVIL  GY  +VD+WS  
Sbjct: 153 KPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 212
Query: 91  CTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLK 150
           C   E+  G +LF            DH+    ++I ++       G  S ++  +     
Sbjct: 213 CIMGEMIKGGVLFP---------GTDHIDQWNKVIEQL-------GTPSPEFMKKLQPTV 256
Query: 151 RI---RRLKF--WSLDRLLVDKYRFSETD-----AREFAEFLVPLLDFTPEKRPTAQQCL 200
           R     R K+  +S ++L  D    ++++     A +  + L  +L     KR +  + L
Sbjct: 257 RTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEAL 316
Query: 201 QHPWLSL 207
           QHP++++
Sbjct: 317 QHPYINV 323

>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed With A Specific Inhibitor Of Human P38 Map Kinase Length = 380

Iteration: 1
 Score = 62.4 bits (150), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 54/195 (27%), Positives = 83/195 (42%), Gaps = 36/195 (18%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQ------FAEEIQTRQYRAPEVILRA-GYSFSVD 85
           KP   L       K+ DFG A  A+          E + TR YRAPE++L + GY+ S+D
Sbjct: 171 KPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSID 230
Query: 86  MWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDR 145
           +WS  C   E+ +   +F    G+ + +  +H+             + I G+ S++    
Sbjct: 231 IWSVGCILAEMLSNRPIFP---GKHYLDQLNHI-------------LGILGSPSQE---- 270
Query: 146 HGDLKRIRRLKFWSLDRLLVDKYR------FSETDAREFAEFLVPLLDFTPEKRPTAQQC 199
             DL  I  LK  +    L  K +      F   D++   + L  +L F P KR   +Q 
Sbjct: 271 --DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKAL-DLLDKMLTFNPHKRIEVEQA 327
Query: 200 LQHPWLSLRNSTRDE 214
           L HP+L       DE
Sbjct: 328 LAHPYLEQYYDPSDE 342

>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 62.4 bits (150), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 51/187 (27%), Positives = 84/187 (44%), Gaps = 28/187 (14%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQF--AEEIQTRQYRAPEVILRAGYSFSVDMWSFA 90
           KP   +   D   K++DFG A  A   F     + TR YRAPEVIL  GY  +VD+WS  
Sbjct: 153 KPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 212
Query: 91  CTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLK 150
           C   E+  G +LF            DH+    ++I ++       G  S ++  +     
Sbjct: 213 CIMGEMIKGGVLFP---------GTDHIDQWNKVIEQL-------GTPSPEFMKKLQPTV 256
Query: 151 RI---RRLKF--WSLDRLLVDKYRFSETD-----AREFAEFLVPLLDFTPEKRPTAQQCL 200
           R     R K+  +S ++L  D    ++++     A +  + L  +L     KR +  + L
Sbjct: 257 RTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEAL 316
Query: 201 QHPWLSL 207
           QHP++++
Sbjct: 317 QHPYINV 323

>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Length = 364

Iteration: 1
 Score = 62.4 bits (150), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 49/178 (27%), Positives = 78/178 (43%), Gaps = 10/178 (5%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQF--AEEIQTRQYRAPEVILRAGYSFSVDMWSFA 90
           KP   +   D   K++DFG A  A   F     + TR YRAPEVIL  GY  +VD+WS  
Sbjct: 153 KPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 212
Query: 91  CTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGK-MPRKIAIGGAQSKDYFDRHGDL 149
           C   E+    +LF    G+ +    D    ++E +G   P  +       ++Y +     
Sbjct: 213 CIMGEMVRHKILFP---GRDYI---DQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKY 266
Query: 150 KRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSL 207
             +   K +  D L       ++  A +  + L  +L   P KR +    LQHP++++
Sbjct: 267 AGLTFPKLFP-DSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINV 323

>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Length = 355

Iteration: 1
 Score = 62.0 bits (149), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 49/178 (27%), Positives = 78/178 (43%), Gaps = 10/178 (5%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQF--AEEIQTRQYRAPEVILRAGYSFSVDMWSFA 90
           KP   +   D   K++DFG A  A   F     + TR YRAPEVIL  GY  +VD+WS  
Sbjct: 153 KPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 212
Query: 91  CTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGK-MPRKIAIGGAQSKDYFDRHGDL 149
           C   E+    +LF    G+ +    D    ++E +G   P  +       ++Y +     
Sbjct: 213 CIMGEMVRHKILFP---GRDYI---DQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKY 266
Query: 150 KRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSL 207
             +   K +  D L       ++  A +  + L  +L   P KR +    LQHP++++
Sbjct: 267 AGLTFPKLFP-DSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINV 323

>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline Inhibitor Length = 356

Iteration: 1
 Score = 62.0 bits (149), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 49/178 (27%), Positives = 78/178 (43%), Gaps = 10/178 (5%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQF--AEEIQTRQYRAPEVILRAGYSFSVDMWSFA 90
           KP   +   D   K++DFG A  A   F     + TR YRAPEVIL  GY  +VD+WS  
Sbjct: 146 KPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 205
Query: 91  CTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGK-MPRKIAIGGAQSKDYFDRHGDL 149
           C   E+    +LF    G+ +    D    ++E +G   P  +       ++Y +     
Sbjct: 206 CIMGEMVRHKILFP---GRDYI---DQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKY 259
Query: 150 KRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSL 207
             +   K +  D L       ++  A +  + L  +L   P KR +    LQHP++++
Sbjct: 260 AGLTFPKLFP-DSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINV 316

>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 62.0 bits (149), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 54/195 (27%), Positives = 84/195 (43%), Gaps = 36/195 (18%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQ------FAEEIQTRQYRAPEVILRA-GYSFSVD 85
           KP   L       K+ DFG A  A+          E + TR YRAPE++L + GY+ S+D
Sbjct: 153 KPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSID 212
Query: 86  MWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDR 145
           +WS  C   E+ +   +F    G+ + +  +H+             + I G+ S++    
Sbjct: 213 IWSVGCILAEMLSNRPIFP---GKHYLDQLNHI-------------LGILGSPSQE---- 252
Query: 146 HGDLKRIRRLKFWSLDRLLVDKYR------FSETDAREFAEFLVPLLDFTPEKRPTAQQC 199
             DL  I  LK  +    L  K +      F   D++   + L  +L F P KR   +Q 
Sbjct: 253 --DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKAL-DLLDKMLTFNPHKRIEVEQA 309
Query: 200 LQHPWLSLRNSTRDE 214
           L HP+L+      DE
Sbjct: 310 LAHPYLAQYYDPSDE 324

>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2 Length = 360

Iteration: 1
 Score = 62.0 bits (149), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 52/186 (27%), Positives = 85/186 (45%), Gaps = 26/186 (13%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQF--AEEIQTRQYRAPEVILRAGYSFSVDMWSFA 90
           KP   +   D   K++DFG A  A+  F     + TR YRAPEVIL  GY  +VD+WS  
Sbjct: 151 KPSNIVVKSDCTLKILDFGLARTASTNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 210
Query: 91  CTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKM--PRKIAIGGAQS--KDYFDRH 146
           C   EL  G ++F     QG     DH+    ++I ++  P    +   Q   ++Y +  
Sbjct: 211 CIMGELVKGSVIF-----QG----TDHIDQWNKVIEQLGTPSAEFMAALQPTVRNYVENR 261
Query: 147 GDLKRIRRLKFWSLDRLLVDKYRFSETD-----AREFAEFLVPLLDFTPEKRPTAQQCLQ 201
                I      + + L  D    SE++       +  + L  +L   P+KR +  + L+
Sbjct: 262 PAYPGI------AFEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPDKRISVDEALR 315
Query: 202 HPWLSL 207
           HP++++
Sbjct: 316 HPYITV 321

>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor, Sr- 3451 Length = 353

Iteration: 1
 Score = 62.0 bits (149), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 49/178 (27%), Positives = 78/178 (43%), Gaps = 10/178 (5%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQF--AEEIQTRQYRAPEVILRAGYSFSVDMWSFA 90
           KP   +   D   K++DFG A  A   F     + TR YRAPEVIL  GY  +VD+WS  
Sbjct: 153 KPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 212
Query: 91  CTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGK-MPRKIAIGGAQSKDYFDRHGDL 149
           C   E+    +LF    G+ +    D    ++E +G   P  +       ++Y +     
Sbjct: 213 CIMGEMVRHKILFP---GRDYI---DQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKY 266
Query: 150 KRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSL 207
             +   K +  D L       ++  A +  + L  +L   P KR +    LQHP++++
Sbjct: 267 AGLTFPKLFP-DSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINV 323

>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2 Length = 364

Iteration: 1
 Score = 62.0 bits (149), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 54/195 (27%), Positives = 83/195 (42%), Gaps = 36/195 (18%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQ------FAEEIQTRQYRAPEVILRA-GYSFSVD 85
           KP   L       K+ DFG A  A+          E + TR YRAPE++L + GY+ S+D
Sbjct: 155 KPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSID 214
Query: 86  MWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDR 145
           +WS  C   E+ +   +F    G+ + +  +H+             + I G+ S++    
Sbjct: 215 IWSVGCILAEMLSNRPIFP---GKHYLDQLNHI-------------LGILGSPSQE---- 254
Query: 146 HGDLKRIRRLKFWSLDRLLVDKYR------FSETDAREFAEFLVPLLDFTPEKRPTAQQC 199
             DL  I  LK  +    L  K +      F   D++   + L  +L F P KR   +Q 
Sbjct: 255 --DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKAL-DLLDKMLTFNPHKRIEVEQA 311
Query: 200 LQHPWLSLRNSTRDE 214
           L HP+L       DE
Sbjct: 312 LAHPYLEQYYDPSDE 326

>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor Length = 364

Iteration: 1
 Score = 62.0 bits (149), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 54/195 (27%), Positives = 83/195 (42%), Gaps = 36/195 (18%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQ------FAEEIQTRQYRAPEVILRA-GYSFSVD 85
           KP   L       K+ DFG A  A+          E + TR YRAPE++L + GY+ S+D
Sbjct: 155 KPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSID 214
Query: 86  MWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDR 145
           +WS  C   E+ +   +F    G+ + +  +H+             + I G+ S++    
Sbjct: 215 IWSVGCILAEMLSNRPIFP---GKHYLDQLNHI-------------LGILGSPSQE---- 254
Query: 146 HGDLKRIRRLKFWSLDRLLVDKYR------FSETDAREFAEFLVPLLDFTPEKRPTAQQC 199
             DL  I  LK  +    L  K +      F   D++   + L  +L F P KR   +Q 
Sbjct: 255 --DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKAL-DLLDKMLTFNPHKRIEVEQA 311
Query: 200 LQHPWLSLRNSTRDE 214
           L HP+L       DE
Sbjct: 312 LAHPYLEQYYDPSDE 326

>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75 Length = 360

Iteration: 1
 Score = 62.0 bits (149), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 54/195 (27%), Positives = 83/195 (42%), Gaps = 36/195 (18%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQ------FAEEIQTRQYRAPEVILRA-GYSFSVD 85
           KP   L       K+ DFG A  A+          E + TR YRAPE++L + GY+ S+D
Sbjct: 151 KPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSID 210
Query: 86  MWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDR 145
           +WS  C   E+ +   +F    G+ + +  +H+             + I G+ S++    
Sbjct: 211 IWSVGCILAEMLSNRPIFP---GKHYLDQLNHI-------------LGILGSPSQE---- 250
Query: 146 HGDLKRIRRLKFWSLDRLLVDKYR------FSETDAREFAEFLVPLLDFTPEKRPTAQQC 199
             DL  I  LK  +    L  K +      F   D++   + L  +L F P KR   +Q 
Sbjct: 251 --DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKAL-DLLDKMLTFNPHKRIEVEQA 307
Query: 200 LQHPWLSLRNSTRDE 214
           L HP+L       DE
Sbjct: 308 LAHPYLEQYYDPSDE 322

>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38) Length = 360

Iteration: 1
 Score = 61.6 bits (148), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 79/186 (42%), Gaps = 24/186 (12%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWSFAC 91
           KP       D   K++DFG A   + + A  + TR YRAPE++L    Y+ +VD+WS  C
Sbjct: 152 KPSNLAVNEDCELKILDFGLARHTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGC 211
Query: 92  TAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKI--AIGGAQSKDYFDRHGDL 149
              EL TG  LF         +  D L L++ L+G    ++   I    +++Y      +
Sbjct: 212 IMAELLTGRTLFPG------TDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQM 265
Query: 150 KRIRRLK-FWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLR 208
            ++     F   + L VD               L  +L    +KR TA Q L H + +  
Sbjct: 266 PKMNFANVFIGANPLAVD--------------LLEKMLVLDSDKRITAAQALAHAYFAQY 311
Query: 209 NSTRDE 214
           +   DE
Sbjct: 312 HDPDDE 317

>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With Inhibitor Pg-874743 Length = 348

Iteration: 1
 Score = 61.6 bits (148), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 79/186 (42%), Gaps = 24/186 (12%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWSFAC 91
           KP       D   K++DFG A   + + A  + TR YRAPE++L    Y+ +VD+WS  C
Sbjct: 148 KPSNLAVNEDCELKILDFGLARHTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGC 207
Query: 92  TAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKI--AIGGAQSKDYFDRHGDL 149
              EL TG  LF         +  D L L++ L+G    ++   I    +++Y      +
Sbjct: 208 IMAELLTGRTLFPG------TDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQM 261
Query: 150 KRIRRLK-FWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLR 208
            ++     F   + L VD               L  +L    +KR TA Q L H + +  
Sbjct: 262 PKMNFANVFIGANPLAVD--------------LLEKMLVLDSDKRITAAQALAHAYFAQY 307
Query: 209 NSTRDE 214
           +   DE
Sbjct: 308 HDPDDE 313

>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796 Length = 364

Iteration: 1
 Score = 61.6 bits (148), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 49/181 (27%), Positives = 84/181 (46%), Gaps = 16/181 (8%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQF--AEEIQTRQYRAPEVILRAGYSFSVDMWSFA 90
           KP   +   D   K++DFG A  A   F     + TR YRAPEVIL  GY+ +VD+WS  
Sbjct: 153 KPSNIVVKSDCTLKILDFGLARTACTNFMMTPYVVTRYYRAPEVILGMGYAANVDIWSVG 212
Query: 91  CTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKM--PRKIAIGGAQS--KDYFDRH 146
           C   EL  G ++F     QG     DH+    ++I ++  P    +   Q   ++Y +  
Sbjct: 213 CIMGELVKGCVIF-----QG----TDHIDQWNKVIEQLGTPSAEFMAALQPTVRNYVENR 263
Query: 147 GDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLS 206
                I+  + +  D +   +    +    +  + L  +L   P+KR +  + L+HP+++
Sbjct: 264 PKYPGIKFEELFP-DWIFPSESERDKIKTSQARDLLSKMLVIDPDKRISVDEALRHPYIT 322
Query: 207 L 207
           +
Sbjct: 323 V 323

>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With N,n-dimethyl-4-(4- Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide Length = 380

Iteration: 1
 Score = 61.6 bits (148), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 54/195 (27%), Positives = 83/195 (42%), Gaps = 36/195 (18%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQ------FAEEIQTRQYRAPEVILRA-GYSFSVD 85
           KP   L       K+ DFG A  A+          E + TR YRAPE++L + GY+ S+D
Sbjct: 171 KPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSID 230
Query: 86  MWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDR 145
           +WS  C   E+ +   +F    G+ + +  +H+             + I G+ S++    
Sbjct: 231 IWSVGCILAEMLSNRPIFP---GKHYLDQLNHI-------------LGILGSPSQE---- 270
Query: 146 HGDLKRIRRLKFWSLDRLLVDKYR------FSETDAREFAEFLVPLLDFTPEKRPTAQQC 199
             DL  I  LK  +    L  K +      F   D++   + L  +L F P KR   +Q 
Sbjct: 271 --DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKAL-DLLDKMLTFNPHKRIEVEQA 327
Query: 200 LQHPWLSLRNSTRDE 214
           L HP+L       DE
Sbjct: 328 LAHPYLEQYYDPSDE 342

>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious Tri-Substituted Thiophene Based Jnk Inhibitor Length = 363

Iteration: 1
 Score = 61.6 bits (148), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 49/178 (27%), Positives = 78/178 (43%), Gaps = 10/178 (5%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQF--AEEIQTRQYRAPEVILRAGYSFSVDMWSFA 90
           KP   +   D   K++DFG A  A   F     + TR YRAPEVIL  GY  +VD+WS  
Sbjct: 153 KPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 212
Query: 91  CTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGK-MPRKIAIGGAQSKDYFDRHGDL 149
           C   E+    +LF    G+ +    D    ++E +G   P  +       ++Y +     
Sbjct: 213 CIMGEMVRHKILFP---GRDYI---DQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKY 266
Query: 150 KRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSL 207
             +   K +  D L       ++  A +  + L  +L   P KR +    LQHP++++
Sbjct: 267 AGLTFPKLFP-DSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINV 323

>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With N-{3-Cyano-6-[3-(1- Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2, 3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide Length = 364

Iteration: 1
 Score = 61.6 bits (148), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 49/178 (27%), Positives = 78/178 (43%), Gaps = 10/178 (5%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQF--AEEIQTRQYRAPEVILRAGYSFSVDMWSFA 90
           KP   +   D   K++DFG A  A   F     + TR YRAPEVIL  GY  +VD+WS  
Sbjct: 153 KPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 212
Query: 91  CTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGK-MPRKIAIGGAQSKDYFDRHGDL 149
           C   E+    +LF    G+ +    D    ++E +G   P  +       ++Y +     
Sbjct: 213 CIMGEMVRHKILFP---GRDYI---DQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKY 266
Query: 150 KRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSL 207
             +   K +  D L       ++  A +  + L  +L   P KR +    LQHP++++
Sbjct: 267 AGLTFPKLFP-DSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINV 323

>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk Inhibitor For The Prevention Of Ischemia-Reperfusion Injury Length = 464

Iteration: 1
 Score = 61.6 bits (148), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 49/178 (27%), Positives = 78/178 (43%), Gaps = 10/178 (5%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQF--AEEIQTRQYRAPEVILRAGYSFSVDMWSFA 90
           KP   +   D   K++DFG A  A   F     + TR YRAPEVIL  GY  +VD+WS  
Sbjct: 191 KPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 250
Query: 91  CTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGK-MPRKIAIGGAQSKDYFDRHGDL 149
           C   E+    +LF    G+ +    D    ++E +G   P  +       ++Y +     
Sbjct: 251 CIMGEMVRHKILFP---GRDYI---DQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKY 304
Query: 150 KRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSL 207
             +   K +  D L       ++  A +  + L  +L   P KR +    LQHP++++
Sbjct: 305 AGLTFPKLFP-DSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINV 361

>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole- Pyrimidine Inhibitor Length = 364

Iteration: 1
 Score = 61.6 bits (148), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 49/178 (27%), Positives = 78/178 (43%), Gaps = 10/178 (5%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQF--AEEIQTRQYRAPEVILRAGYSFSVDMWSFA 90
           KP   +   D   K++DFG A  A   F     + TR YRAPEVIL  GY  +VD+WS  
Sbjct: 154 KPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 213
Query: 91  CTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGK-MPRKIAIGGAQSKDYFDRHGDL 149
           C   E+    +LF    G+ +    D    ++E +G   P  +       ++Y +     
Sbjct: 214 CIMGEMVRHKILFP---GRDYI---DQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKY 267
Query: 150 KRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSL 207
             +   K +  D L       ++  A +  + L  +L   P KR +    LQHP++++
Sbjct: 268 AGLTFPKLFP-DSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINV 324

>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And Thiazole Based Inhibitors Of Jnk For The Treatment Of Neurodegenerative Diseases Length = 362

Iteration: 1
 Score = 61.6 bits (148), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 49/178 (27%), Positives = 78/178 (43%), Gaps = 10/178 (5%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQF--AEEIQTRQYRAPEVILRAGYSFSVDMWSFA 90
           KP   +   D   K++DFG A  A   F     + TR YRAPEVIL  GY  +VD+WS  
Sbjct: 152 KPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 211
Query: 91  CTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGK-MPRKIAIGGAQSKDYFDRHGDL 149
           C   E+    +LF    G+ +    D    ++E +G   P  +       ++Y +     
Sbjct: 212 CIMGEMVRHKILFP---GRDYI---DQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKY 265
Query: 150 KRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSL 207
             +   K +  D L       ++  A +  + L  +L   P KR +    LQHP++++
Sbjct: 266 AGLTFPKLFP-DSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINV 322

>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 61.6 bits (148), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 50/189 (26%), Positives = 81/189 (42%), Gaps = 24/189 (12%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQ------FAEEIQTRQYRAPEVILRA-GYSFSVD 85
           KP   L       K+ DFG A  A+          E + TR YRAPE++L + GY+ S+D
Sbjct: 153 KPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSID 212
Query: 86  MWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDR 145
           +WS  C   E+ +   +F    G+ + +  +H+             + I G+ S++  + 
Sbjct: 213 IWSVGCILAEMLSNRPIFP---GKHYLDQLNHI-------------LGILGSPSQEDLNC 256
Query: 146 HGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 205
             +LK    L        +     F   D++   + L  +L F P KR   +Q L HP+L
Sbjct: 257 GINLKARNYLLSLPHKNKVPWNRLFPNADSKAL-DLLDKMLTFNPHKRIEVEQALAHPYL 315
Query: 206 SLRNSTRDE 214
           +      DE
Sbjct: 316 AQYYDPSDE 324

>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3- Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide Length = 365

Iteration: 1
 Score = 61.6 bits (148), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 49/178 (27%), Positives = 78/178 (43%), Gaps = 10/178 (5%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQF--AEEIQTRQYRAPEVILRAGYSFSVDMWSFA 90
           KP   +   D   K++DFG A  A   F     + TR YRAPEVIL  GY  +VD+WS  
Sbjct: 154 KPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 213
Query: 91  CTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGK-MPRKIAIGGAQSKDYFDRHGDL 149
           C   E+    +LF    G+ +    D    ++E +G   P  +       ++Y +     
Sbjct: 214 CIMGEMVRHKILFP---GRDYI---DQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKY 267
Query: 150 KRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSL 207
             +   K +  D L       ++  A +  + L  +L   P KR +    LQHP++++
Sbjct: 268 AGLTFPKLFP-DSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINV 324

>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Pyrazolopyridazine Derivative Length = 368

Iteration: 1
 Score = 61.6 bits (148), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 54/195 (27%), Positives = 83/195 (42%), Gaps = 36/195 (18%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQ------FAEEIQTRQYRAPEVILRA-GYSFSVD 85
           KP   L       K+ DFG A  A+          E + TR YRAPE++L + GY+ S+D
Sbjct: 159 KPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSID 218
Query: 86  MWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDR 145
           +WS  C   E+ +   +F    G+ + +  +H+             + I G+ S++    
Sbjct: 219 IWSVGCILAEMLSNRPIFP---GKHYLDQLNHI-------------LGILGSPSQE---- 258
Query: 146 HGDLKRIRRLKFWSLDRLLVDKYR------FSETDAREFAEFLVPLLDFTPEKRPTAQQC 199
             DL  I  LK  +    L  K +      F   D++   + L  +L F P KR   +Q 
Sbjct: 259 --DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKAL-DLLDKMLTFNPHKRIEVEQA 315
Query: 200 LQHPWLSLRNSTRDE 214
           L HP+L       DE
Sbjct: 316 LAHPYLEQYYDPSDE 330

>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule Inhibitor Length = 368

Iteration: 1
 Score = 61.6 bits (148), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 54/195 (27%), Positives = 83/195 (42%), Gaps = 36/195 (18%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQ------FAEEIQTRQYRAPEVILRA-GYSFSVD 85
           KP   L       K+ DFG A  A+          E + TR YRAPE++L + GY+ S+D
Sbjct: 151 KPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSID 210
Query: 86  MWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDR 145
           +WS  C   E+ +   +F    G+ + +  +H+             + I G+ S++    
Sbjct: 211 IWSVGCILAEMLSNRPIFP---GKHYLDQLNHI-------------LGILGSPSQE---- 250
Query: 146 HGDLKRIRRLKFWSLDRLLVDKYR------FSETDAREFAEFLVPLLDFTPEKRPTAQQC 199
             DL  I  LK  +    L  K +      F   D++   + L  +L F P KR   +Q 
Sbjct: 251 --DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKAL-DLLDKMLTFNPHKRIEVEQA 307
Query: 200 LQHPWLSLRNSTRDE 214
           L HP+L       DE
Sbjct: 308 LAHPYLEQYYDPSDE 322

>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With Mgamp-Pnp Length = 423

Iteration: 1
 Score = 61.2 bits (147), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 49/178 (27%), Positives = 78/178 (43%), Gaps = 10/178 (5%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQF--AEEIQTRQYRAPEVILRAGYSFSVDMWSFA 90
           KP   +   D   K++DFG A  A   F     + TR YRAPEVIL  GY  +VD+WS  
Sbjct: 191 KPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 250
Query: 91  CTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGK-MPRKIAIGGAQSKDYFDRHGDL 149
           C   E+    +LF    G+ +    D    ++E +G   P  +       ++Y +     
Sbjct: 251 CIMGEMVRHKILFP---GRDYI---DQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKY 304
Query: 150 KRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSL 207
             +   K +  D L       ++  A +  + L  +L   P KR +    LQHP++++
Sbjct: 305 AGLTFPKLFP-DSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINV 361

>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide Length = 356

Iteration: 1
 Score = 61.2 bits (147), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 49/178 (27%), Positives = 78/178 (43%), Gaps = 10/178 (5%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQF--AEEIQTRQYRAPEVILRAGYSFSVDMWSFA 90
           KP   +   D   K++DFG A  A   F     + TR YRAPEVIL  GY  +VD+WS  
Sbjct: 147 KPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 206
Query: 91  CTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGK-MPRKIAIGGAQSKDYFDRHGDL 149
           C   E+    +LF    G+ +    D    ++E +G   P  +       ++Y +     
Sbjct: 207 CIMGEMVRHKILF---PGRDYI---DQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKY 260
Query: 150 KRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSL 207
             +   K +  D L       ++  A +  + L  +L   P KR +    LQHP++++
Sbjct: 261 AGLTFPKLFP-DSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINV 317

>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Map Kinase Erk2 Length = 365

Iteration: 1
 Score = 61.2 bits (147), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 54/195 (27%), Positives = 83/195 (42%), Gaps = 36/195 (18%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQ------FAEEIQTRQYRAPEVILRA-GYSFSVD 85
           KP   L       K+ DFG A  A+          E + TR YRAPE++L + GY+ S+D
Sbjct: 156 KPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSID 215
Query: 86  MWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDR 145
           +WS  C   E+ +   +F    G+ + +  +H+             + I G+ S++    
Sbjct: 216 IWSVGCILAEMLSNRPIFP---GKHYLDQLNHI-------------LGILGSPSQE---- 255
Query: 146 HGDLKRIRRLKFWSLDRLLVDKYR------FSETDAREFAEFLVPLLDFTPEKRPTAQQC 199
             DL  I  LK  +    L  K +      F   D++   + L  +L F P KR   +Q 
Sbjct: 256 --DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKAL-DLLDKMLTFNPHKRIEVEQA 312
Query: 200 LQHPWLSLRNSTRDE 214
           L HP+L       DE
Sbjct: 313 LAHPYLEQYYDPSDE 327

>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin 2-Yl]amino}phenyl)acetic Acid Length = 366

Iteration: 1
 Score = 61.2 bits (147), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 54/195 (27%), Positives = 83/195 (42%), Gaps = 36/195 (18%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQ------FAEEIQTRQYRAPEVILRA-GYSFSVD 85
           KP   L       K+ DFG A  A+          E + TR YRAPE++L + GY+ S+D
Sbjct: 157 KPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSID 216
Query: 86  MWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDR 145
           +WS  C   E+ +   +F    G+ + +  +H+             + I G+ S++    
Sbjct: 217 IWSVGCILAEMLSNRPIFP---GKHYLDQLNHI-------------LGILGSPSQE---- 256
Query: 146 HGDLKRIRRLKFWSLDRLLVDKYR------FSETDAREFAEFLVPLLDFTPEKRPTAQQC 199
             DL  I  LK  +    L  K +      F   D++   + L  +L F P KR   +Q 
Sbjct: 257 --DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKAL-DLLDKMLTFNPHKRIEVEQA 313
Query: 200 LQHPWLSLRNSTRDE 214
           L HP+L       DE
Sbjct: 314 LAHPYLEQYYDPSDE 328

>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently Bound Length = 357

Iteration: 1
 Score = 61.2 bits (147), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 54/195 (27%), Positives = 83/195 (42%), Gaps = 36/195 (18%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQ------FAEEIQTRQYRAPEVILRA-GYSFSVD 85
           KP   L       K+ DFG A  A+          E + TR YRAPE++L + GY+ S+D
Sbjct: 148 KPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSID 207
Query: 86  MWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDR 145
           +WS  C   E+ +   +F    G+ + +  +H+             + I G+ S++    
Sbjct: 208 IWSVGCILAEMLSNRPIFP---GKHYLDQLNHI-------------LGILGSPSQE---- 247
Query: 146 HGDLKRIRRLKFWSLDRLLVDKYR------FSETDAREFAEFLVPLLDFTPEKRPTAQQC 199
             DL  I  LK  +    L  K +      F   D++   + L  +L F P KR   +Q 
Sbjct: 248 --DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKAL-DLLDKMLTFNPHKRIEVEQA 304
Query: 200 LQHPWLSLRNSTRDE 214
           L HP+L       DE
Sbjct: 305 LAHPYLEQYYDPSDE 319

>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived From Mkp3 Length = 364

Iteration: 1
 Score = 61.2 bits (147), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 54/195 (27%), Positives = 83/195 (42%), Gaps = 36/195 (18%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQ------FAEEIQTRQYRAPEVILRA-GYSFSVD 85
           KP   L       K+ DFG A  A+          E + TR YRAPE++L + GY+ S+D
Sbjct: 155 KPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSID 214
Query: 86  MWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDR 145
           +WS  C   E+ +   +F    G+ + +  +H+             + I G+ S++    
Sbjct: 215 IWSVGCILAEMLSNRPIFP---GKHYLDQLNHI-------------LGILGSPSQE---- 254
Query: 146 HGDLKRIRRLKFWSLDRLLVDKYR------FSETDAREFAEFLVPLLDFTPEKRPTAQQC 199
             DL  I  LK  +    L  K +      F   D++   + L  +L F P KR   +Q 
Sbjct: 255 --DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKAL-DLLDKMLTFNPHKRIEVEQA 311
Query: 200 LQHPWLSLRNSTRDE 214
           L HP+L       DE
Sbjct: 312 LAHPYLEQYYDPSDE 326

>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length = 358

Iteration: 1
 Score = 61.2 bits (147), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 54/195 (27%), Positives = 83/195 (42%), Gaps = 36/195 (18%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQ------FAEEIQTRQYRAPEVILRA-GYSFSVD 85
           KP   L       K+ DFG A  A+          E + TR YRAPE++L + GY+ S+D
Sbjct: 149 KPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSID 208
Query: 86  MWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDR 145
           +WS  C   E+ +   +F    G+ + +  +H+             + I G+ S++    
Sbjct: 209 IWSVGCILAEMLSNRPIFP---GKHYLDQLNHI-------------LGILGSPSQE---- 248
Query: 146 HGDLKRIRRLKFWSLDRLLVDKYR------FSETDAREFAEFLVPLLDFTPEKRPTAQQC 199
             DL  I  LK  +    L  K +      F   D++   + L  +L F P KR   +Q 
Sbjct: 249 --DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKAL-DLLDKMLTFNPHKRIEVEQA 305
Query: 200 LQHPWLSLRNSTRDE 214
           L HP+L       DE
Sbjct: 306 LAHPYLEQYYDPSDE 320

>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Phosphorylated Map Kinase Erk2 Length = 364

Iteration: 1
 Score = 61.2 bits (147), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 54/195 (27%), Positives = 83/195 (42%), Gaps = 36/195 (18%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQ------FAEEIQTRQYRAPEVILRA-GYSFSVD 85
           KP   L       K+ DFG A  A+          E + TR YRAPE++L + GY+ S+D
Sbjct: 155 KPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSID 214
Query: 86  MWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDR 145
           +WS  C   E+ +   +F    G+ + +  +H+             + I G+ S++    
Sbjct: 215 IWSVGCILAEMLSNRPIFP---GKHYLDQLNHI-------------LGILGSPSQE---- 254
Query: 146 HGDLKRIRRLKFWSLDRLLVDKYR------FSETDAREFAEFLVPLLDFTPEKRPTAQQC 199
             DL  I  LK  +    L  K +      F   D++   + L  +L F P KR   +Q 
Sbjct: 255 --DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKAL-DLLDKMLTFNPHKRIEVEQA 311
Query: 200 LQHPWLSLRNSTRDE 214
           L HP+L       DE
Sbjct: 312 LAHPYLEQYYDPSDE 326

>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3 Length = 355

Iteration: 1
 Score = 61.2 bits (147), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 49/178 (27%), Positives = 78/178 (43%), Gaps = 10/178 (5%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQF--AEEIQTRQYRAPEVILRAGYSFSVDMWSFA 90
           KP   +   D   K++DFG A  A   F     + TR YRAPEVIL  GY  +VD+WS  
Sbjct: 146 KPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 205
Query: 91  CTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGK-MPRKIAIGGAQSKDYFDRHGDL 149
           C   E+    +LF    G+ +    D    ++E +G   P  +       ++Y +     
Sbjct: 206 CIMGEMVRHKILF---PGRDYI---DQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKY 259
Query: 150 KRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSL 207
             +   K +  D L       ++  A +  + L  +L   P KR +    LQHP++++
Sbjct: 260 AGLTFPKLFP-DSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINV 316

>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2 Length = 365

Iteration: 1
 Score = 61.2 bits (147), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 54/195 (27%), Positives = 83/195 (42%), Gaps = 36/195 (18%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQ------FAEEIQTRQYRAPEVILRA-GYSFSVD 85
           KP   L       K+ DFG A  A+          E + TR YRAPE++L + GY+ S+D
Sbjct: 156 KPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSID 215
Query: 86  MWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDR 145
           +WS  C   E+ +   +F    G+ + +  +H+             + I G+ S++    
Sbjct: 216 IWSVGCILAEMLSNRPIFP---GKHYLDQLNHI-------------LGILGSPSQE---- 255
Query: 146 HGDLKRIRRLKFWSLDRLLVDKYR------FSETDAREFAEFLVPLLDFTPEKRPTAQQC 199
             DL  I  LK  +    L  K +      F   D++   + L  +L F P KR   +Q 
Sbjct: 256 --DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKAL-DLLDKMLTFNPHKRIEVEQA 312
Query: 200 LQHPWLSLRNSTRDE 214
           L HP+L       DE
Sbjct: 313 LAHPYLEQYYDPSDE 327

>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine Mutation At Position 52 Length = 364

Iteration: 1
 Score = 61.2 bits (147), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 54/195 (27%), Positives = 83/195 (42%), Gaps = 36/195 (18%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQ------FAEEIQTRQYRAPEVILRA-GYSFSVD 85
           KP   L       K+ DFG A  A+          E + TR YRAPE++L + GY+ S+D
Sbjct: 155 KPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSID 214
Query: 86  MWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDR 145
           +WS  C   E+ +   +F    G+ + +  +H+             + I G+ S++    
Sbjct: 215 IWSVGCILAEMLSNRPIFP---GKHYLDQLNHI-------------LGILGSPSQE---- 254
Query: 146 HGDLKRIRRLKFWSLDRLLVDKYR------FSETDAREFAEFLVPLLDFTPEKRPTAQQC 199
             DL  I  LK  +    L  K +      F   D++   + L  +L F P KR   +Q 
Sbjct: 255 --DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKAL-DLLDKMLTFNPHKRIEVEQA 311
Query: 200 LQHPWLSLRNSTRDE 214
           L HP+L       DE
Sbjct: 312 LAHPYLEQYYDPSDE 326

>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57 Length = 360

Iteration: 1
 Score = 61.2 bits (147), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 54/195 (27%), Positives = 83/195 (42%), Gaps = 36/195 (18%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQ------FAEEIQTRQYRAPEVILRA-GYSFSVD 85
           KP   L       K+ DFG A  A+          E + TR YRAPE++L + GY+ S+D
Sbjct: 151 KPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSID 210
Query: 86  MWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDR 145
           +WS  C   E+ +   +F    G+ + +  +H+             + I G+ S++    
Sbjct: 211 IWSVGCILAEMLSNRPIFP---GKHYLDQLNHI-------------LGILGSPSQE---- 250
Query: 146 HGDLKRIRRLKFWSLDRLLVDKYR------FSETDAREFAEFLVPLLDFTPEKRPTAQQC 199
             DL  I  LK  +    L  K +      F   D++   + L  +L F P KR   +Q 
Sbjct: 251 --DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKAL-DLLDKMLTFNPHKRIEVEQA 307
Query: 200 LQHPWLSLRNSTRDE 214
           L HP+L       DE
Sbjct: 308 LAHPYLEQYYDPSDE 322

>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3 Length = 356

Iteration: 1
 Score = 61.2 bits (147), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 49/178 (27%), Positives = 78/178 (43%), Gaps = 10/178 (5%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQF--AEEIQTRQYRAPEVILRAGYSFSVDMWSFA 90
           KP   +   D   K++DFG A  A   F     + TR YRAPEVIL  GY  +VD+WS  
Sbjct: 147 KPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 206
Query: 91  CTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGK-MPRKIAIGGAQSKDYFDRHGDL 149
           C   E+    +LF    G+ +    D    ++E +G   P  +       ++Y +     
Sbjct: 207 CIMGEMVRHKILF---PGRDYI---DQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKY 260
Query: 150 KRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSL 207
             +   K +  D L       ++  A +  + L  +L   P KR +    LQHP++++
Sbjct: 261 AGLTFPKLFP-DSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINV 317

>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2 Length = 364

Iteration: 1
 Score = 61.2 bits (147), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 54/195 (27%), Positives = 83/195 (42%), Gaps = 36/195 (18%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQ------FAEEIQTRQYRAPEVILRA-GYSFSVD 85
           KP   L       K+ DFG A  A+          E + TR YRAPE++L + GY+ S+D
Sbjct: 155 KPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSID 214
Query: 86  MWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDR 145
           +WS  C   E+ +   +F    G+ + +  +H+             + I G+ S++    
Sbjct: 215 IWSVGCILAEMLSNRPIFP---GKHYLDQLNHI-------------LGILGSPSQE---- 254
Query: 146 HGDLKRIRRLKFWSLDRLLVDKYR------FSETDAREFAEFLVPLLDFTPEKRPTAQQC 199
             DL  I  LK  +    L  K +      F   D++   + L  +L F P KR   +Q 
Sbjct: 255 --DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKAL-DLLDKMLTFNPHKRIEVEQA 311
Query: 200 LQHPWLSLRNSTRDE 214
           L HP+L       DE
Sbjct: 312 LAHPYLEQYYDPSDE 326

>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 61.2 bits (147), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 54/195 (27%), Positives = 83/195 (42%), Gaps = 36/195 (18%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQ------FAEEIQTRQYRAPEVILRA-GYSFSVD 85
           KP   L       K+ DFG A  A+          E + TR YRAPE++L + GY+ S+D
Sbjct: 153 KPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSID 212
Query: 86  MWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDR 145
           +WS  C   E+ +   +F    G+ + +  +H+             + I G+ S++    
Sbjct: 213 IWSVGCILAEMLSNRPIFP---GKHYLDQLNHI-------------LGILGSPSQE---- 252
Query: 146 HGDLKRIRRLKFWSLDRLLVDKYR------FSETDAREFAEFLVPLLDFTPEKRPTAQQC 199
             DL  I  LK  +    L  K +      F   D++   + L  +L F P KR   +Q 
Sbjct: 253 --DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKAL-DLLDKMLTFNPHKRIEVEQA 309
Query: 200 LQHPWLSLRNSTRDE 214
           L HP+L       DE
Sbjct: 310 LAHPYLEQYYDPSDE 324

>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain In Complex With A Monocyclic Pyrazolone Inhibitor Length = 360

Iteration: 1
 Score = 61.2 bits (147), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 52/189 (27%), Positives = 83/189 (43%), Gaps = 30/189 (15%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWSFAC 91
           KP       D   K++DFG A   + + A  + TR YRAPE++L    Y+ +VD+WS  C
Sbjct: 152 KPSNLAVNEDCELKILDFGLARHTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGC 211
Query: 92  TAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKI--AIGGAQSKDYFDRHGDL 149
              EL TG  LF         +  D L L++ L+G    ++   I    +++Y      L
Sbjct: 212 IMAELLTGRTLFPG------TDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ---SL 262
Query: 150 KRIRRLKFWSL----DRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 205
            ++ ++ F ++    + L VD               L  +L    +KR TA Q L H + 
Sbjct: 263 TQMPKMNFANVFIGANPLAVD--------------LLEKMLVLDSDKRITAAQALAHAYF 308
Query: 206 SLRNSTRDE 214
           +  +   DE
Sbjct: 309 AQYHDPDDE 317

>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase Length = 380

Iteration: 1
 Score = 61.2 bits (147), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 50/186 (26%), Positives = 78/186 (41%), Gaps = 24/186 (12%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWSFAC 91
           KP       D   K++DFG A   + +    + TR YRAPE++L    Y+ +VD+WS  C
Sbjct: 172 KPSNLAVNEDCELKILDFGLARHTDDEMXGXVATRWYRAPEIMLNWMHYNQTVDIWSVGC 231
Query: 92  TAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKI--AIGGAQSKDYFDRHGDL 149
              EL TG  LF         +  D L L++ L+G    ++   I    +++Y      +
Sbjct: 232 IMAELLTGRTLFPG------TDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQM 285
Query: 150 KRIRRLK-FWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLR 208
            ++     F   + L VD               L  +L    +KR TA Q L H + +  
Sbjct: 286 PKMNFANVFIGANPLAVD--------------LLEKMLVLDSDKRITAAQALAHAYFAQY 331
Query: 209 NSTRDE 214
           +   DE
Sbjct: 332 HDPDDE 337

>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl Amide Inhibitor Length = 371

Iteration: 1
 Score = 61.2 bits (147), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 82/189 (43%), Gaps = 30/189 (15%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWSFAC 91
           KP       D   K++DFG A   + +    + TR YRAPE++L    Y+ +VD+WS  C
Sbjct: 163 KPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 222
Query: 92  TAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKI--AIGGAQSKDYFDRHGDL 149
              EL TG  LF         +  D L L++ L+G    ++   I    +++Y      L
Sbjct: 223 IMAELLTGRTLFPG------TDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ---SL 273
Query: 150 KRIRRLKFWSL----DRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 205
            ++ ++ F ++    + L VD               L  +L    +KR TA Q L H + 
Sbjct: 274 TQMPKMNFANVFIGANPLAVD--------------LLEKMLVLDSDKRITAAQALAHAYF 319
Query: 206 SLRNSTRDE 214
           +  +   DE
Sbjct: 320 AQYHDPDDE 328

>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360

Iteration: 1
 Score = 61.2 bits (147), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 82/189 (43%), Gaps = 30/189 (15%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWSFAC 91
           KP       D   K++DFG A   + +    + TR YRAPE++L    Y+ +VD+WS  C
Sbjct: 152 KPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 211
Query: 92  TAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKI--AIGGAQSKDYFDRHGDL 149
              EL TG  LF         +  D L L++ L+G    ++   I    +++Y      L
Sbjct: 212 IMAELLTGRTLFPG------TDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ---SL 262
Query: 150 KRIRRLKFWSL----DRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 205
            ++ ++ F ++    + L VD               L  +L    +KR TA Q L H + 
Sbjct: 263 TQMPKMNFANVFIGANPLAVD--------------LLEKMLVLDSDKRITAAQALAHAYF 308
Query: 206 SLRNSTRDE 214
           +  +   DE
Sbjct: 309 AQYHDPDDE 317

>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk Docking Partner Length = 380

Iteration: 1
 Score = 60.8 bits (146), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 50/186 (26%), Positives = 78/186 (41%), Gaps = 24/186 (12%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWSFAC 91
           KP       D   K++DFG A   + +    + TR YRAPE++L    Y+ +VD+WS  C
Sbjct: 172 KPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 231
Query: 92  TAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKI--AIGGAQSKDYFDRHGDL 149
              EL TG  LF         +  D L L++ L+G    ++   I    +++Y      +
Sbjct: 232 IMAELLTGRTLFPG------TDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQM 285
Query: 150 KRIRRLK-FWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLR 208
            ++     F   + L VD               L  +L    +KR TA Q L H + +  
Sbjct: 286 PKMNFANVFIGANPLAVD--------------LLEKMLVLDSDKRITAAQALAHAYFAQY 331
Query: 209 NSTRDE 214
           +   DE
Sbjct: 332 HDPDDE 337

>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655 Length = 379

Iteration: 1
 Score = 60.8 bits (146), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 50/186 (26%), Positives = 78/186 (41%), Gaps = 24/186 (12%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWSFAC 91
           KP       D   K++DFG A   + +    + TR YRAPE++L    Y+ +VD+WS  C
Sbjct: 171 KPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 230
Query: 92  TAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKI--AIGGAQSKDYFDRHGDL 149
              EL TG  LF         +  D L L++ L+G    ++   I    +++Y      +
Sbjct: 231 IMAELLTGRTLFPG------TDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQM 284
Query: 150 KRIRRLK-FWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLR 208
            ++     F   + L VD               L  +L    +KR TA Q L H + +  
Sbjct: 285 PKMNFANVFIGANPLAVD--------------LLEKMLVLDSDKRITAAQALAHAYFAQY 330
Query: 209 NSTRDE 214
           +   DE
Sbjct: 331 HDPDDE 336

>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine Length = 365

Iteration: 1
 Score = 60.8 bits (146), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 82/189 (43%), Gaps = 30/189 (15%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWSFAC 91
           KP       D   K++DFG A   + +    + TR YRAPE++L    Y+ +VD+WS  C
Sbjct: 157 KPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 216
Query: 92  TAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKI--AIGGAQSKDYFDRHGDL 149
              EL TG  LF         +  D L L++ L+G    ++   I    +++Y      L
Sbjct: 217 IMAELLTGRTLFPG------TDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ---SL 267
Query: 150 KRIRRLKFWSL----DRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 205
            ++ ++ F ++    + L VD               L  +L    +KR TA Q L H + 
Sbjct: 268 TQMPKMNFANVFIGANPLAVD--------------LLEKMLVLDSDKRITAAQALAHAYF 313
Query: 206 SLRNSTRDE 214
           +  +   DE
Sbjct: 314 AQYHDPDDE 322

>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195 Length = 365

Iteration: 1
 Score = 60.8 bits (146), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 82/189 (43%), Gaps = 30/189 (15%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWSFAC 91
           KP       D   K++DFG A   + +    + TR YRAPE++L    Y+ +VD+WS  C
Sbjct: 157 KPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 216
Query: 92  TAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKI--AIGGAQSKDYFDRHGDL 149
              EL TG  LF         +  D L L++ L+G    ++   I    +++Y      L
Sbjct: 217 IMAELLTGRTLFPG------TDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ---SL 267
Query: 150 KRIRRLKFWSL----DRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 205
            ++ ++ F ++    + L VD               L  +L    +KR TA Q L H + 
Sbjct: 268 TQMPKMNFANVFIGANPLAVD--------------LLEKMLVLDSDKRITAAQALAHAYF 313
Query: 206 SLRNSTRDE 214
           +  +   DE
Sbjct: 314 AQYHDPDDE 322

>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A Dihydroquinolinone Length = 366

Iteration: 1
 Score = 60.8 bits (146), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 82/189 (43%), Gaps = 30/189 (15%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWSFAC 91
           KP       D   K++DFG A   + +    + TR YRAPE++L    Y+ +VD+WS  C
Sbjct: 158 KPSNLAVNEDSELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 217
Query: 92  TAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKI--AIGGAQSKDYFDRHGDL 149
              EL TG  LF         +  D L L++ L+G    ++   I    +++Y      L
Sbjct: 218 IMAELLTGRTLFPG------TDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ---SL 268
Query: 150 KRIRRLKFWSL----DRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 205
            ++ ++ F ++    + L VD               L  +L    +KR TA Q L H + 
Sbjct: 269 TQMPKMNFANVFIGANPLAVD--------------LLEKMLVLDSDKRITAAQALAHAYF 314
Query: 206 SLRNSTRDE 214
           +  +   DE
Sbjct: 315 AQYHDPDDE 323

>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P- Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl- Pyridin-3-Yl)naphthalen-1-Yl]urea Length = 348

Iteration: 1
 Score = 60.8 bits (146), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 80/186 (43%), Gaps = 24/186 (12%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWSFAC 91
           KP       D   K++DFG A   + +    + TR YRAPE++L    Y+ +VD+WS  C
Sbjct: 148 KPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 207
Query: 92  TAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKI--AIGGAQSKDYFDRHGDL 149
              EL TG  LF P +     +  D L L++ L+G    ++   I    +++Y      +
Sbjct: 208 IMAELLTGRTLF-PGT-----DHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQM 261
Query: 150 KRIRRLK-FWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLR 208
            ++     F   + L VD               L  +L    +KR TA Q L H + +  
Sbjct: 262 PKMNFANVFIGANPLAVD--------------LLEKMLVLDSDKRITAAQALAHAYFAQY 307
Query: 209 NSTRDE 214
           +   DE
Sbjct: 308 HDPDDE 313

>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With Inhibitor Pg-892579 Length = 348

Iteration: 1
 Score = 60.8 bits (146), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 50/186 (26%), Positives = 78/186 (41%), Gaps = 24/186 (12%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWSFAC 91
           KP       D   K++DFG A   + +    + TR YRAPE++L    Y+ +VD+WS  C
Sbjct: 148 KPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 207
Query: 92  TAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKI--AIGGAQSKDYFDRHGDL 149
              EL TG  LF         +  D L L++ L+G    ++   I    +++Y      +
Sbjct: 208 IMAELLTGRTLFPG------TDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQM 261
Query: 150 KRIRRLK-FWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLR 208
            ++     F   + L VD               L  +L    +KR TA Q L H + +  
Sbjct: 262 PKMNFANVFIGANPLAVD--------------LLEKMLVLDSDKRITAAQALAHAYFAQY 307
Query: 209 NSTRDE 214
           +   DE
Sbjct: 308 HDPDDE 313

>pdb|4EXU|A Chain A, Mapk13, Inactive Form Length = 371

Iteration: 1
 Score = 60.8 bits (146), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 52/188 (27%), Positives = 84/188 (44%), Gaps = 24/188 (12%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWSFAC 91
           KP       D   K++DFG A  A+ +    + TR YRAPEVIL    Y+ +VD+WS  C
Sbjct: 171 KPGNLAVNEDCELKILDFGLARHADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGC 230
Query: 92  TAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKR 151
              E+ TG  LF  K         D+L  + ++       + + G    ++  +  D  +
Sbjct: 231 IMAEMLTGKTLFKGK---------DYLDQLTQI-------LKVTGVPGTEFVQKLND--K 272
Query: 152 IRRLKFWSLDRLLVDKYRFSETDAR---EFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLR 208
             +    SL +    +  F++   R   + A+ L  +L+   +KR TA Q L HP+    
Sbjct: 273 AAKSYIQSLPQ--TPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPF 330
Query: 209 NSTRDETK 216
               +ET+
Sbjct: 331 RDPEEETE 338

>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In Phosphorylated P38a And In Solution Length = 370

Iteration: 1
 Score = 60.8 bits (146), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 50/186 (26%), Positives = 78/186 (41%), Gaps = 24/186 (12%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWSFAC 91
           KP       D   K++DFG A   + +    + TR YRAPE++L    Y+ +VD+WS  C
Sbjct: 162 KPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 221
Query: 92  TAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKI--AIGGAQSKDYFDRHGDL 149
              EL TG  LF         +  D L L++ L+G    ++   I    +++Y      +
Sbjct: 222 IMAELLTGRTLFPG------TDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQM 275
Query: 150 KRIRRLK-FWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLR 208
            ++     F   + L VD               L  +L    +KR TA Q L H + +  
Sbjct: 276 PKMNFANVFIGANPLAVD--------------LLEKMLVLDSDKRITAAQALAHAYFAQY 321
Query: 209 NSTRDE 214
           +   DE
Sbjct: 322 HDPDDE 327

>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The Docking Site On Its Nuclear Substrate Mef2a Length = 360

Iteration: 1
 Score = 60.8 bits (146), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 50/186 (26%), Positives = 78/186 (41%), Gaps = 24/186 (12%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWSFAC 91
           KP       D   K++DFG A   + +    + TR YRAPE++L    Y+ +VD+WS  C
Sbjct: 152 KPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 211
Query: 92  TAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKI--AIGGAQSKDYFDRHGDL 149
              EL TG  LF         +  D L L++ L+G    ++   I    +++Y      +
Sbjct: 212 IMAELLTGRTLFPG------TDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQM 265
Query: 150 KRIRRLK-FWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLR 208
            ++     F   + L VD               L  +L    +KR TA Q L H + +  
Sbjct: 266 PKMNFANVFIGANPLAVD--------------LLEKMLVLDSDKRITAAQALAHAYFAQY 311
Query: 209 NSTRDE 214
           +   DE
Sbjct: 312 HDPDDE 317

>pdb|2OZA|B Chain B, Structure Of P38alpha Complex Length = 366

Iteration: 1
 Score = 60.8 bits (146), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 50/186 (26%), Positives = 78/186 (41%), Gaps = 24/186 (12%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWSFAC 91
           KP       D   K++DFG A   + +    + TR YRAPE++L    Y+ +VD+WS  C
Sbjct: 158 KPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 217
Query: 92  TAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKI--AIGGAQSKDYFDRHGDL 149
              EL TG  LF         +  D L L++ L+G    ++   I    +++Y      +
Sbjct: 218 IMAELLTGRTLFPG------TDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQM 271
Query: 150 KRIRRLK-FWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLR 208
            ++     F   + L VD               L  +L    +KR TA Q L H + +  
Sbjct: 272 PKMNFANVFIGANPLAVD--------------LLEKMLVLDSDKRITAAQALAHAYFAQY 317
Query: 209 NSTRDE 214
           +   DE
Sbjct: 318 HDPDDE 323

>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 60.5 bits (145), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 82/189 (43%), Gaps = 30/189 (15%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWSFAC 91
           KP       D   K++DFG A   + +    + TR YRAPE++L    Y+ +VD+WS  C
Sbjct: 154 KPSNLAVNEDSELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 213
Query: 92  TAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKI--AIGGAQSKDYFDRHGDL 149
              EL TG  LF         +  D L L++ L+G    ++   I    +++Y      L
Sbjct: 214 IMAELLTGRTLFPG------TDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ---SL 264
Query: 150 KRIRRLKFWSL----DRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 205
            ++ ++ F ++    + L VD               L  +L    +KR TA Q L H + 
Sbjct: 265 TQMPKMNFANVFIGANPLAVD--------------LLEKMLVLDSDKRITAAQALAHAYF 310
Query: 206 SLRNSTRDE 214
           +  +   DE
Sbjct: 311 AQYHDPDDE 319

>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A Dihydroquinazolinone Inhibitor Length = 370

Iteration: 1
 Score = 60.5 bits (145), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 56/208 (26%), Positives = 88/208 (42%), Gaps = 32/208 (15%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWSFAC 91
           KP       D   +++DFG A +A+++    + TR YRAPE++L    Y+ +VD+WS  C
Sbjct: 158 KPSNVAVNEDSELRILDFGLARQADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 217
Query: 92  TAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGK-MPRKIA-IGGAQSKDYFDR---- 145
              EL  G  LF    G  +    D L  +ME++G   P  +A I    ++ Y       
Sbjct: 218 IMAELLQGKALFP---GSDYI---DQLKRIMEVVGTPSPEVLAKISSEHARTYIQSLPPM 271
Query: 146 -HGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPW 204
              DL  I    F   + L +D               L  +L    ++R +A + L H +
Sbjct: 272 PQKDLSSI----FRGANPLAID--------------LLGRMLVLDSDQRVSAAEALAHAY 313
Query: 205 LSLRNSTRDETKNKSNVEKVDVGMSKLE 232
            S  +   DE + +   E V+     LE
Sbjct: 314 FSQYHDPEDEPEAEPYDESVEAKERTLE 341

>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499 Length = 372

Iteration: 1
 Score = 60.5 bits (145), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 82/189 (43%), Gaps = 30/189 (15%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWSFAC 91
           KP       D   K++DFG A   + +    + TR YRAPE++L    Y+ +VD+WS  C
Sbjct: 164 KPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 223
Query: 92  TAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKI--AIGGAQSKDYFDRHGDL 149
              EL TG  LF         +  D L L++ L+G    ++   I    +++Y      L
Sbjct: 224 IMAELLTGRTLFPG------TDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ---SL 274
Query: 150 KRIRRLKFWSL----DRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 205
            ++ ++ F ++    + L VD               L  +L    +KR TA Q L H + 
Sbjct: 275 TQMPKMNFANVFIGANPLAVD--------------LLEKMLVLDSDKRITAAQALAHAYF 320
Query: 206 SLRNSTRDE 214
           +  +   DE
Sbjct: 321 AQYHDPDDE 329

>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex Length = 366

Iteration: 1
 Score = 60.5 bits (145), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 82/189 (43%), Gaps = 30/189 (15%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWSFAC 91
           KP       D   K++DFG A   + +    + TR YRAPE++L    Y+ +VD+WS  C
Sbjct: 158 KPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 217
Query: 92  TAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKI--AIGGAQSKDYFDRHGDL 149
              EL TG  LF         +  D L L++ L+G    ++   I    +++Y      L
Sbjct: 218 IMAELLTGRTLFPG------TDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ---SL 268
Query: 150 KRIRRLKFWSL----DRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 205
            ++ ++ F ++    + L VD               L  +L    +KR TA Q L H + 
Sbjct: 269 TQMPKMNFANVFIGANPLAVD--------------LLEKMLVLDSDKRITAAQALAHAYF 314
Query: 206 SLRNSTRDE 214
           +  +   DE
Sbjct: 315 AQYHDPDDE 323

>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole Inhibitor Length = 372

Iteration: 1
 Score = 60.5 bits (145), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 82/189 (43%), Gaps = 30/189 (15%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWSFAC 91
           KP       D   K++DFG A   + +    + TR YRAPE++L    Y+ +VD+WS  C
Sbjct: 164 KPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 223
Query: 92  TAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKI--AIGGAQSKDYFDRHGDL 149
              EL TG  LF         +  D L L++ L+G    ++   I    +++Y      L
Sbjct: 224 IMAELLTGRTLFPG------TDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ---SL 274
Query: 150 KRIRRLKFWSL----DRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 205
            ++ ++ F ++    + L VD               L  +L    +KR TA Q L H + 
Sbjct: 275 TQMPKMNFANVFIGANPLAVD--------------LLEKMLVLDSDKRITAAQALAHAYF 320
Query: 206 SLRNSTRDE 214
           +  +   DE
Sbjct: 321 AQYHDPDDE 329

>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195 Length = 372

Iteration: 1
 Score = 60.5 bits (145), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 82/189 (43%), Gaps = 30/189 (15%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWSFAC 91
           KP       D   K++DFG A   + +    + TR YRAPE++L    Y+ +VD+WS  C
Sbjct: 164 KPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 223
Query: 92  TAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKI--AIGGAQSKDYFDRHGDL 149
              EL TG  LF         +  D L L++ L+G    ++   I    +++Y      L
Sbjct: 224 IMAELLTGRTLFPG------TDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ---SL 274
Query: 150 KRIRRLKFWSL----DRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 205
            ++ ++ F ++    + L VD               L  +L    +KR TA Q L H + 
Sbjct: 275 TQMPKMNFANVFIGANPLAVD--------------LLEKMLVLDSDKRITAAQALAHAYF 320
Query: 206 SLRNSTRDE 214
           +  +   DE
Sbjct: 321 AQYHDPDDE 329

>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex With Dp802 Length = 354

Iteration: 1
 Score = 60.5 bits (145), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 50/186 (26%), Positives = 78/186 (41%), Gaps = 24/186 (12%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWSFAC 91
           KP       D   K++DFG A   + +    + TR YRAPE++L    Y+ +VD+WS  C
Sbjct: 152 KPSNLAVNEDCELKILDFGLARHTDDEMTGXVATRWYRAPEIMLNWMHYNQTVDIWSVGC 211
Query: 92  TAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKI--AIGGAQSKDYFDRHGDL 149
              EL TG  LF         +  D L L++ L+G    ++   I    +++Y      +
Sbjct: 212 IMAELLTGRTLFPG------TDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQM 265
Query: 150 KRIRRLK-FWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLR 208
            ++     F   + L VD               L  +L    +KR TA Q L H + +  
Sbjct: 266 PKMNFANVFIGANPLAVD--------------LLEKMLVLDSDKRITAAQALAHAYFAQY 311
Query: 209 NSTRDE 214
           +   DE
Sbjct: 312 HDPDDE 317

>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Pyrrole-2- Carboxamide Inhibitor Length = 371

Iteration: 1
 Score = 60.5 bits (145), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 50/186 (26%), Positives = 78/186 (41%), Gaps = 24/186 (12%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWSFAC 91
           KP       D   K++DFG A   + +    + TR YRAPE++L    Y+ +VD+WS  C
Sbjct: 163 KPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 222
Query: 92  TAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKI--AIGGAQSKDYFDRHGDL 149
              EL TG  LF         +  D L L++ L+G    ++   I    +++Y      +
Sbjct: 223 IMAELLTGRTLFPG------TDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQM 276
Query: 150 KRIRRLK-FWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLR 208
            ++     F   + L VD               L  +L    +KR TA Q L H + +  
Sbjct: 277 PKMNFANVFIGANPLAVD--------------LLEKMLVLDSDKRITAAQALAHAYFAQY 322
Query: 209 NSTRDE 214
           +   DE
Sbjct: 323 HDPDDE 328

>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1- Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3- Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide Length = 380

Iteration: 1
 Score = 60.5 bits (145), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 82/189 (43%), Gaps = 30/189 (15%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWSFAC 91
           KP       D   K++DFG A   + +    + TR YRAPE++L    Y+ +VD+WS  C
Sbjct: 172 KPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 231
Query: 92  TAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKI--AIGGAQSKDYFDRHGDL 149
              EL TG  LF         +  D L L++ L+G    ++   I    +++Y      L
Sbjct: 232 IMAELLTGRTLFPG------TDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ---SL 282
Query: 150 KRIRRLKFWSL----DRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 205
            ++ ++ F ++    + L VD               L  +L    +KR TA Q L H + 
Sbjct: 283 TQMPKMNFANVFIGANPLAVD--------------LLEKMLVLDSDKRITAAQALAHAYF 328
Query: 206 SLRNSTRDE 214
           +  +   DE
Sbjct: 329 AQYHDPDDE 337

>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48 Length = 360

Iteration: 1
 Score = 60.5 bits (145), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 50/186 (26%), Positives = 78/186 (41%), Gaps = 24/186 (12%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWSFAC 91
           KP       D   K++DFG A   + +    + TR YRAPE++L    Y+ +VD+WS  C
Sbjct: 152 KPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 211
Query: 92  TAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKI--AIGGAQSKDYFDRHGDL 149
              EL TG  LF         +  D L L++ L+G    ++   I    +++Y      +
Sbjct: 212 IMAELLTGRTLFPG------TDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQM 265
Query: 150 KRIRRLK-FWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLR 208
            ++     F   + L VD               L  +L    +KR TA Q L H + +  
Sbjct: 266 PKMNFANVFIGANPLAVD--------------LLEKMLVLDSDKRITAAQALAHAYFAQY 311
Query: 209 NSTRDE 214
           +   DE
Sbjct: 312 HDPDDE 317

>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360

Iteration: 1
 Score = 60.5 bits (145), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 82/189 (43%), Gaps = 30/189 (15%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWSFAC 91
           KP       D   K++DFG A   + +    + TR YRAPE++L    Y+ +VD+WS  C
Sbjct: 152 KPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 211
Query: 92  TAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKI--AIGGAQSKDYFDRHGDL 149
              EL TG  LF         +  D L L++ L+G    ++   I    +++Y      L
Sbjct: 212 IMAELLTGRTLFPG------TDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ---SL 262
Query: 150 KRIRRLKFWSL----DRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 205
            ++ ++ F ++    + L VD               L  +L    +KR TA Q L H + 
Sbjct: 263 TQMPKMNFANVFIGANPLAVD--------------LLEKMLVLDSDKRITAAQALAHAYF 308
Query: 206 SLRNSTRDE 214
           +  +   DE
Sbjct: 309 AQYHDPDDE 317

>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor Length = 383

Iteration: 1
 Score = 60.5 bits (145), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 82/189 (43%), Gaps = 30/189 (15%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWSFAC 91
           KP       D   K++DFG A   + +    + TR YRAPE++L    Y+ +VD+WS  C
Sbjct: 175 KPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 234
Query: 92  TAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKI--AIGGAQSKDYFDRHGDL 149
              EL TG  LF         +  D L L++ L+G    ++   I    +++Y      L
Sbjct: 235 IMAELLTGRTLFPG------TDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ---SL 285
Query: 150 KRIRRLKFWSL----DRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 205
            ++ ++ F ++    + L VD               L  +L    +KR TA Q L H + 
Sbjct: 286 TQMPKMNFANVFIGANPLAVD--------------LLEKMLVLDSDKRITAAQALAHAYF 331
Query: 206 SLRNSTRDE 214
           +  +   DE
Sbjct: 332 AQYHDPDDE 340

>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995 Length = 379

Iteration: 1
 Score = 60.5 bits (145), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 82/189 (43%), Gaps = 30/189 (15%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWSFAC 91
           KP       D   K++DFG A   + +    + TR YRAPE++L    Y+ +VD+WS  C
Sbjct: 171 KPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 230
Query: 92  TAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKI--AIGGAQSKDYFDRHGDL 149
              EL TG  LF         +  D L L++ L+G    ++   I    +++Y      L
Sbjct: 231 IMAELLTGRTLFPG------TDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ---SL 281
Query: 150 KRIRRLKFWSL----DRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 205
            ++ ++ F ++    + L VD               L  +L    +KR TA Q L H + 
Sbjct: 282 TQMPKMNFANVFIGANPLAVD--------------LLEKMLVLDSDKRITAAQALAHAYF 327
Query: 206 SLRNSTRDE 214
           +  +   DE
Sbjct: 328 AQYHDPDDE 336

>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121 Length = 362

Iteration: 1
 Score = 60.5 bits (145), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 50/186 (26%), Positives = 78/186 (41%), Gaps = 24/186 (12%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWSFAC 91
           KP       D   K++DFG A   + +    + TR YRAPE++L    Y+ +VD+WS  C
Sbjct: 154 KPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 213
Query: 92  TAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKI--AIGGAQSKDYFDRHGDL 149
              EL TG  LF         +  D L L++ L+G    ++   I    +++Y      +
Sbjct: 214 IMAELLTGRTLFPG------TDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQM 267
Query: 150 KRIRRLK-FWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLR 208
            ++     F   + L VD               L  +L    +KR TA Q L H + +  
Sbjct: 268 PKMNFANVFIGANPLAVD--------------LLEKMLVLDSDKRITAAQALAHAYFAQY 313
Query: 209 NSTRDE 214
           +   DE
Sbjct: 314 HDPDDE 319

>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A Dihydroquinazolinone Inhibitor Length = 366

Iteration: 1
 Score = 60.5 bits (145), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 82/189 (43%), Gaps = 30/189 (15%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWSFAC 91
           KP       D   K++DFG A   + +    + TR YRAPE++L    Y+ +VD+WS  C
Sbjct: 158 KPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 217
Query: 92  TAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKI--AIGGAQSKDYFDRHGDL 149
              EL TG  LF         +  D L L++ L+G    ++   I    +++Y      L
Sbjct: 218 IMAELLTGRTLFPG------TDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ---SL 268
Query: 150 KRIRRLKFWSL----DRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 205
            ++ ++ F ++    + L VD               L  +L    +KR TA Q L H + 
Sbjct: 269 TQMPKMNFANVFIGANPLAVD--------------LLEKMLVLDSDKRITAAQALAHAYF 314
Query: 206 SLRNSTRDE 214
           +  +   DE
Sbjct: 315 AQYHDPDDE 323

>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715 Length = 362

Iteration: 1
 Score = 60.5 bits (145), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 82/189 (43%), Gaps = 30/189 (15%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWSFAC 91
           KP       D   K++DFG A   + +    + TR YRAPE++L    Y+ +VD+WS  C
Sbjct: 154 KPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 213
Query: 92  TAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKI--AIGGAQSKDYFDRHGDL 149
              EL TG  LF         +  D L L++ L+G    ++   I    +++Y      L
Sbjct: 214 IMAELLTGRTLFPG------TDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ---SL 264
Query: 150 KRIRRLKFWSL----DRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 205
            ++ ++ F ++    + L VD               L  +L    +KR TA Q L H + 
Sbjct: 265 TQMPKMNFANVFIGANPLAVD--------------LLEKMLVLDSDKRITAAQALAHAYF 310
Query: 206 SLRNSTRDE 214
           +  +   DE
Sbjct: 311 AQYHDPDDE 319

>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase Length = 367

Iteration: 1
 Score = 60.5 bits (145), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 82/189 (43%), Gaps = 30/189 (15%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWSFAC 91
           KP       D   K++DFG A   + +    + TR YRAPE++L    Y+ +VD+WS  C
Sbjct: 159 KPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 218
Query: 92  TAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKI--AIGGAQSKDYFDRHGDL 149
              EL TG  LF         +  D L L++ L+G    ++   I    +++Y      L
Sbjct: 219 IMAELLTGRTLFPG------TDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ---SL 269
Query: 150 KRIRRLKFWSL----DRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 205
            ++ ++ F ++    + L VD               L  +L    +KR TA Q L H + 
Sbjct: 270 TQMPKMNFANVFIGANPLAVD--------------LLEKMLVLDSDKRITAAQALAHAYF 315
Query: 206 SLRNSTRDE 214
           +  +   DE
Sbjct: 316 AQYHDPDDE 324

>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A Dihydroquinazolinone Length = 370

Iteration: 1
 Score = 60.5 bits (145), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 56/208 (26%), Positives = 88/208 (42%), Gaps = 32/208 (15%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWSFAC 91
           KP       D   +++DFG A +A+++    + TR YRAPE++L    Y+ +VD+WS  C
Sbjct: 158 KPSNVAVNEDSELRILDFGLARQADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 217
Query: 92  TAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGK-MPRKIA-IGGAQSKDYFDR---- 145
              EL  G  LF    G  +    D L  +ME++G   P  +A I    ++ Y       
Sbjct: 218 IMAELLQGKALFP---GSDYI---DQLKRIMEVVGTPSPEVLAKISSEHARTYIQSLPPM 271
Query: 146 -HGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPW 204
              DL  I    F   + L +D               L  +L    ++R +A + L H +
Sbjct: 272 PQKDLSSI----FRGANPLAID--------------LLGRMLVLDSDQRVSAAEALAHAY 313
Query: 205 LSLRNSTRDETKNKSNVEKVDVGMSKLE 232
            S  +   DE + +   E V+     LE
Sbjct: 314 FSQYHDPEDEPEAEPYDESVEAKERTLE 341

>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant Length = 360

Iteration: 1
 Score = 60.5 bits (145), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 50/186 (26%), Positives = 78/186 (41%), Gaps = 24/186 (12%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWSFAC 91
           KP       D   K++DFG A   + +    + TR YRAPE++L    Y+ +VD+WS  C
Sbjct: 152 KPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 211
Query: 92  TAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKI--AIGGAQSKDYFDRHGDL 149
              EL TG  LF         +  D L L++ L+G    ++   I    +++Y      +
Sbjct: 212 IMAELLTGRTLFPG------TDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQM 265
Query: 150 KRIRRLK-FWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLR 208
            ++     F   + L VD               L  +L    +KR TA Q L H + +  
Sbjct: 266 PKMNFANVFIGANPLAVD--------------LLEKMLVLDSDKRITAAQALAHAYFAQY 311
Query: 209 NSTRDE 214
           +   DE
Sbjct: 312 HDPDDE 317

>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase Length = 353

Iteration: 1
 Score = 60.5 bits (145), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 54/185 (29%), Positives = 80/185 (43%), Gaps = 18/185 (9%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWSFAC 91
           KP       D   K++DFG A  A+ +    + TR YRAPEVIL    Y+ +VD+WS  C
Sbjct: 153 KPGNLAVNEDCELKILDFGLARHADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGC 212
Query: 92  TAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKR 151
              E+ TG  LF    G+ +    D L  ++++ G +P    +     K        L +
Sbjct: 213 IMAEMLTGKTLF---KGKDYL---DQLTQILKVTG-VPGTEFVQKLNDKAAKSYIQSLPQ 265
Query: 152 IRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNST 211
             R  F  L         F     +  A+ L  +L+   +KR TA Q L HP+       
Sbjct: 266 TPRKDFTQL---------FPRASPQA-ADLLEKMLELDVDKRLTAAQALTHPFFEPFRDP 315
Query: 212 RDETK 216
            +ET+
Sbjct: 316 EEETE 320

>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea Length = 365

Iteration: 1
 Score = 60.5 bits (145), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 50/186 (26%), Positives = 78/186 (41%), Gaps = 24/186 (12%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWSFAC 91
           KP       D   K++DFG A   + +    + TR YRAPE++L    Y+ +VD+WS  C
Sbjct: 157 KPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 216
Query: 92  TAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKI--AIGGAQSKDYFDRHGDL 149
              EL TG  LF         +  D L L++ L+G    ++   I    +++Y      +
Sbjct: 217 IMAELLTGRTLFPG------TDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQM 270
Query: 150 KRIRRLK-FWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLR 208
            ++     F   + L VD               L  +L    +KR TA Q L H + +  
Sbjct: 271 PKMNFANVFIGANPLAVD--------------LLEKMLVLDSDKRITAAQALAHAYFAQY 316
Query: 209 NSTRDE 214
           +   DE
Sbjct: 317 HDPDDE 322

>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant Length = 360

Iteration: 1
 Score = 60.5 bits (145), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 82/189 (43%), Gaps = 30/189 (15%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWSFAC 91
           KP       D   K++DFG A   + +    + TR YRAPE++L    Y+ +VD+WS  C
Sbjct: 152 KPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 211
Query: 92  TAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKI--AIGGAQSKDYFDRHGDL 149
              EL TG  LF         +  D L L++ L+G    ++   I    +++Y      L
Sbjct: 212 IMAELLTGRTLFPG------TDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ---SL 262
Query: 150 KRIRRLKFWSL----DRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 205
            ++ ++ F ++    + L VD               L  +L    +KR TA Q L H + 
Sbjct: 263 TQMPKMNFANVFIGANPLAVD--------------LLEKMLVLDSDKRITAAQALAHAYF 308
Query: 206 SLRNSTRDE 214
           +  +   DE
Sbjct: 309 AQYHDPDDE 317

>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 359

Iteration: 1
 Score = 60.5 bits (145), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 50/186 (26%), Positives = 78/186 (41%), Gaps = 24/186 (12%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWSFAC 91
           KP       D   K++DFG A   + +    + TR YRAPE++L    Y+ +VD+WS  C
Sbjct: 151 KPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 210
Query: 92  TAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKI--AIGGAQSKDYFDRHGDL 149
              EL TG  LF         +  D L L++ L+G    ++   I    +++Y      +
Sbjct: 211 IMAELLTGRTLFPG------TDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQM 264
Query: 150 KRIRRLK-FWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLR 208
            ++     F   + L VD               L  +L    +KR TA Q L H + +  
Sbjct: 265 PKMNFANVFIGANPLAVD--------------LLEKMLVLDSDKRITAAQALAHAYFAQY 310
Query: 209 NSTRDE 214
           +   DE
Sbjct: 311 HDPDDE 316

>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase Length = 362

Iteration: 1
 Score = 60.5 bits (145), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 82/189 (43%), Gaps = 30/189 (15%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWSFAC 91
           KP       D   K++DFG A   + +    + TR YRAPE++L    Y+ +VD+WS  C
Sbjct: 154 KPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 213
Query: 92  TAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKI--AIGGAQSKDYFDRHGDL 149
              EL TG  LF         +  D L L++ L+G    ++   I    +++Y      L
Sbjct: 214 IMAELLTGRTLFPG------TDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ---SL 264
Query: 150 KRIRRLKFWSL----DRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 205
            ++ ++ F ++    + L VD               L  +L    +KR TA Q L H + 
Sbjct: 265 TQMPKMNFANVFIGANPLAVD--------------LLEKMLVLDSDKRITAAQALAHAYF 310
Query: 206 SLRNSTRDE 214
           +  +   DE
Sbjct: 311 AQYHDPDDE 319

>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map Kinase Length = 360

Iteration: 1
 Score = 60.1 bits (144), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 50/186 (26%), Positives = 78/186 (41%), Gaps = 24/186 (12%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWSFAC 91
           KP       D   K++DFG A   + +    + TR YRAPE++L    Y+ +VD+WS  C
Sbjct: 152 KPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 211
Query: 92  TAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKI--AIGGAQSKDYFDRHGDL 149
              EL TG  LF         +  D L L++ L+G    ++   I    +++Y      +
Sbjct: 212 IMAELLTGRTLFPG------TDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQM 265
Query: 150 KRIRRLK-FWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLR 208
            ++     F   + L VD               L  +L    +KR TA Q L H + +  
Sbjct: 266 PKMNFANVFIGANPLAVD--------------LLEKMLVLDSDKRITAAQALAHAYFAQY 311
Query: 209 NSTRDE 214
           +   DE
Sbjct: 312 HDPDDE 317

>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant Length = 360

Iteration: 1
 Score = 60.1 bits (144), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 82/189 (43%), Gaps = 30/189 (15%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWSFAC 91
           KP       D   K++DFG A   + +    + TR YRAPE++L    Y+ +VD+WS  C
Sbjct: 152 KPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 211
Query: 92  TAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKI--AIGGAQSKDYFDRHGDL 149
              EL TG  LF         +  D L L++ L+G    ++   I    +++Y      L
Sbjct: 212 IMAELLTGRTLFPG------TDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ---SL 262
Query: 150 KRIRRLKFWSL----DRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 205
            ++ ++ F ++    + L VD               L  +L    +KR TA Q L H + 
Sbjct: 263 TQMPKMNFANVFIGANPLAVD--------------LLEKMLVLDSDKRITAAQALAHAYF 308
Query: 206 SLRNSTRDE 214
           +  +   DE
Sbjct: 309 AQYHDPDDE 317

>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In Complex With 4-[3-Methylsulfanylanilino]-6,7- Dimethoxyquinazoline Length = 360

Iteration: 1
 Score = 60.1 bits (144), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 50/186 (26%), Positives = 78/186 (41%), Gaps = 24/186 (12%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWSFAC 91
           KP       D   K++DFG A   + +    + TR YRAPE++L    Y+ +VD+WS  C
Sbjct: 152 KPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 211
Query: 92  TAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKI--AIGGAQSKDYFDRHGDL 149
              EL TG  LF         +  D L L++ L+G    ++   I    +++Y      +
Sbjct: 212 IMAELLTGRTLFPG------TDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQM 265
Query: 150 KRIRRLK-FWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLR 208
            ++     F   + L VD               L  +L    +KR TA Q L H + +  
Sbjct: 266 PKMNFANVFIGANPLAVD--------------LLEKMLVLDSDKRITAAQALAHAYFAQY 311
Query: 209 NSTRDE 214
           +   DE
Sbjct: 312 HDPDDE 317

>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based Inhibitor Length = 383

Iteration: 1
 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 50/186 (26%), Positives = 78/186 (41%), Gaps = 24/186 (12%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWSFAC 91
           KP       D   K++DFG A   + +    + TR YRAPE++L    Y+ +VD+WS  C
Sbjct: 175 KPSNLAVNEDCELKILDFGLARHTDDEMXGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 234
Query: 92  TAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKI--AIGGAQSKDYFDRHGDL 149
              EL TG  LF         +  D L L++ L+G    ++   I    +++Y      +
Sbjct: 235 IMAELLTGRTLFPG------TDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQM 288
Query: 150 KRIRRLK-FWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLR 208
            ++     F   + L VD               L  +L    +KR TA Q L H + +  
Sbjct: 289 PKMNFANVFIGANPLAVD--------------LLEKMLVLDSDKRITAAQALAHAYFAQY 334
Query: 209 NSTRDE 214
           +   DE
Sbjct: 335 HDPDDE 340

>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955 Length = 350

Iteration: 1
 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 50/186 (26%), Positives = 78/186 (41%), Gaps = 24/186 (12%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWSFAC 91
           KP       D   K++DFG A   + +    + TR YRAPE++L    Y+ +VD+WS  C
Sbjct: 150 KPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 209
Query: 92  TAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKI--AIGGAQSKDYFDRHGDL 149
              EL TG  LF         +  D L L++ L+G    ++   I    +++Y      +
Sbjct: 210 IMAELLTGRTLFPG------TDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQM 263
Query: 150 KRIRRLK-FWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLR 208
            ++     F   + L VD               L  +L    +KR TA Q L H + +  
Sbjct: 264 PKMNFANVFIGANPLAVD--------------LLEKMLVLDSDKRITAAQALAHAYFAQY 309
Query: 209 NSTRDE 214
           +   DE
Sbjct: 310 HDPDDE 315

>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 349

Iteration: 1
 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 50/186 (26%), Positives = 78/186 (41%), Gaps = 24/186 (12%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWSFAC 91
           KP       D   K++DFG A   + +    + TR YRAPE++L    Y+ +VD+WS  C
Sbjct: 149 KPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 208
Query: 92  TAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKI--AIGGAQSKDYFDRHGDL 149
              EL TG  LF         +  D L L++ L+G    ++   I    +++Y      +
Sbjct: 209 IMAELLTGRTLFPG------TDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQM 262
Query: 150 KRIRRLK-FWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLR 208
            ++     F   + L VD               L  +L    +KR TA Q L H + +  
Sbjct: 263 PKMNFANVFIGANPLAVD--------------LLEKMLVLDSDKRITAAQALAHAYFAQY 308
Query: 209 NSTRDE 214
           +   DE
Sbjct: 309 HDPDDE 314

>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine Length = 351

Iteration: 1
 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 50/186 (26%), Positives = 78/186 (41%), Gaps = 24/186 (12%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWSFAC 91
           KP       D   K++DFG A   + +    + TR YRAPE++L    Y+ +VD+WS  C
Sbjct: 149 KPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 208
Query: 92  TAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKI--AIGGAQSKDYFDRHGDL 149
              EL TG  LF         +  D L L++ L+G    ++   I    +++Y      +
Sbjct: 209 IMAELLTGRTLFPG------TDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQM 262
Query: 150 KRIRRLK-FWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLR 208
            ++     F   + L VD               L  +L    +KR TA Q L H + +  
Sbjct: 263 PKMNFANVFIGANPLAVD--------------LLEKMLVLDSDKRITAAQALAHAYFAQY 308
Query: 209 NSTRDE 214
           +   DE
Sbjct: 309 HDPDDE 314

>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE COMPLEX IN Solution Length = 359

Iteration: 1
 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 82/189 (43%), Gaps = 30/189 (15%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWSFAC 91
           KP       D   K++DFG A   + +    + TR YRAPE++L    Y+ +VD+WS  C
Sbjct: 157 KPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 216
Query: 92  TAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKI--AIGGAQSKDYFDRHGDL 149
              EL TG  LF         +  D L L++ L+G    ++   I    +++Y      L
Sbjct: 217 IMAELLTGRTLFPG------TDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ---SL 267
Query: 150 KRIRRLKFWSL----DRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 205
            ++ ++ F ++    + L VD               L  +L    +KR TA Q L H + 
Sbjct: 268 TQMPKMNFANVFIGANPLAVD--------------LLEKMLVLDSDKRITAAQALAHAYF 313
Query: 206 SLRNSTRDE 214
           +  +   DE
Sbjct: 314 AQYHDPDDE 322

>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376 Length = 354

Iteration: 1
 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 50/186 (26%), Positives = 78/186 (41%), Gaps = 24/186 (12%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWSFAC 91
           KP       D   K++DFG A   + +    + TR YRAPE++L    Y+ +VD+WS  C
Sbjct: 152 KPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 211
Query: 92  TAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKI--AIGGAQSKDYFDRHGDL 149
              EL TG  LF         +  D L L++ L+G    ++   I    +++Y      +
Sbjct: 212 IMAELLTGRTLFPG------TDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQM 265
Query: 150 KRIRRLK-FWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLR 208
            ++     F   + L VD               L  +L    +KR TA Q L H + +  
Sbjct: 266 PKMNFANVFIGANPLAVD--------------LLEKMLVLDSDKRITAAQALAHAYFAQY 311
Query: 209 NSTRDE 214
           +   DE
Sbjct: 312 HDPDDE 317

>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 371

Iteration: 1
 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 50/187 (26%), Positives = 83/187 (44%), Gaps = 28/187 (14%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQF--AEEIQTRQYRAPEVILRAGYSFSVDMWSFA 90
           KP   +   D   K++DFG A  A   F     + TR YRAPEVIL  GY  +VD+WS  
Sbjct: 154 KPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 213
Query: 91  CTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLK 150
           C   E+  G +LF            DH+    ++I ++       G    ++  +     
Sbjct: 214 CIMGEMIKGGVLFP---------GTDHIDQWNKVIEQL-------GTPCPEFMKKLQPTV 257
Query: 151 RI---RRLKF--WSLDRLLVDKYRFSETD-----AREFAEFLVPLLDFTPEKRPTAQQCL 200
           R     R K+  +S ++L  D    ++++     A +  + L  +L     KR +  + L
Sbjct: 258 RTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEAL 317
Query: 201 QHPWLSL 207
           QHP++++
Sbjct: 318 QHPYINV 324

>pdb|3HEC|A Chain A, P38 In Complex With Imatinib Length = 348

Iteration: 1
 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 50/186 (26%), Positives = 78/186 (41%), Gaps = 24/186 (12%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWSFAC 91
           KP       D   K++DFG A   + +    + TR YRAPE++L    Y+ +VD+WS  C
Sbjct: 148 KPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 207
Query: 92  TAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKI--AIGGAQSKDYFDRHGDL 149
              EL TG  LF         +  D L L++ L+G    ++   I    +++Y      +
Sbjct: 208 IMAELLTGRTLFPG------TDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQM 261
Query: 150 KRIRRLK-FWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLR 208
            ++     F   + L VD               L  +L    +KR TA Q L H + +  
Sbjct: 262 PKMNFANVFIGANPLAVD--------------LLEKMLVLDSDKRITAAQALAHAYFAQY 307
Query: 209 NSTRDE 214
           +   DE
Sbjct: 308 HDPDDE 313

>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By The Scaffolding Protein Jip1 And Sp600125 Length = 369

Iteration: 1
 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 50/187 (26%), Positives = 83/187 (44%), Gaps = 28/187 (14%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQF--AEEIQTRQYRAPEVILRAGYSFSVDMWSFA 90
           KP   +   D   K++DFG A  A   F     + TR YRAPEVIL  GY  +VD+WS  
Sbjct: 153 KPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 212
Query: 91  CTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLK 150
           C   E+  G +LF            DH+    ++I ++       G    ++  +     
Sbjct: 213 CIMGEMIKGGVLFP---------GTDHIDQWNKVIEQL-------GTPCPEFMKKLQPTV 256
Query: 151 RI---RRLKF--WSLDRLLVDKYRFSETD-----AREFAEFLVPLLDFTPEKRPTAQQCL 200
           R     R K+  +S ++L  D    ++++     A +  + L  +L     KR +  + L
Sbjct: 257 RTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEAL 316
Query: 201 QHPWLSL 207
           QHP++++
Sbjct: 317 QHPYINV 323

>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 386

Iteration: 1
 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 50/187 (26%), Positives = 83/187 (44%), Gaps = 28/187 (14%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQF--AEEIQTRQYRAPEVILRAGYSFSVDMWSFA 90
           KP   +   D   K++DFG A  A   F     + TR YRAPEVIL  GY  +VD+WS  
Sbjct: 155 KPSNIVVKSDCTLKILDFGLARTAGTSFMMVPFVVTRYYRAPEVILGMGYKENVDIWSVG 214
Query: 91  CTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLK 150
           C   E+  G +LF            DH+    ++I ++       G    ++  +     
Sbjct: 215 CIMGEMIKGGVLFP---------GTDHIDQWNKVIEQL-------GTPCPEFMKKLQPTV 258
Query: 151 RI---RRLKF--WSLDRLLVDKYRFSETD-----AREFAEFLVPLLDFTPEKRPTAQQCL 200
           R     R K+  +S ++L  D    ++++     A +  + L  +L     KR +  + L
Sbjct: 259 RTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEAL 318
Query: 201 QHPWLSL 207
           QHP++++
Sbjct: 319 QHPYINV 325

>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum In Complex With Indirubin E804 Length = 383

Iteration: 1
 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 57/196 (29%), Positives = 86/196 (43%), Gaps = 30/196 (15%)
Query: 33  KPERCL-DGIDMRCKVVDFGNACR--ANKQFAEEIQTRQYRAPEVILRAG-YSFSVDMWS 88
           KP+  L +  D   K+ DFG+A +   ++     I +R YRAPE++L A  Y+ S+D+WS
Sbjct: 168 KPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSVAXICSRFYRAPELMLGATEYTPSIDLWS 227
Query: 89  FACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDR--- 145
             C   EL  G  LF+ ++                 I ++ R I I G  +K+   R   
Sbjct: 228 IGCVFGELILGKPLFSGETS----------------IDQLVRIIQIMGTPTKEQMIRMNP 271
Query: 146 HGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 205
           H    R   LK     ++L       E       + L  +L + P+ R    + + HP+ 
Sbjct: 272 HYTEVRFPTLKAKDWRKIL------PEGTPSLAIDLLEQILRYEPDLRINPYEAMAHPFF 325
Query: 206 -SLRNSTRDETKNKSN 220
             LRNS   E KN SN
Sbjct: 326 DHLRNSYESEVKNNSN 341

>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 59.7 bits (143), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 50/187 (26%), Positives = 83/187 (44%), Gaps = 28/187 (14%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQF--AEEIQTRQYRAPEVILRAGYSFSVDMWSFA 90
           KP   +   D   K++DFG A  A   F     + TR YRAPEVIL  GY  +VD+WS  
Sbjct: 153 KPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 212
Query: 91  CTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLK 150
               E+  G +LF            DH+    ++I ++       G  S ++  +     
Sbjct: 213 VIMGEMIKGGVLFP---------GTDHIDQWNKVIEQL-------GTPSPEFMKKLQPTV 256
Query: 151 RI---RRLKF--WSLDRLLVDKYRFSETD-----AREFAEFLVPLLDFTPEKRPTAQQCL 200
           R     R K+  +S ++L  D    ++++     A +  + L  +L     KR +  + L
Sbjct: 257 RTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEAL 316
Query: 201 QHPWLSL 207
           QHP++++
Sbjct: 317 QHPYINV 323

>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 11 (p38 Beta) In Complex With Nilotinib Length = 348

Iteration: 1
 Score = 59.7 bits (143), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 56/208 (26%), Positives = 88/208 (42%), Gaps = 32/208 (15%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWSFAC 91
           KP       D   +++DFG A +A+++    + TR YRAPE++L    Y+ +VD+WS  C
Sbjct: 150 KPSNVAVNEDCELRILDFGLARQADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 209
Query: 92  TAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGK-MPRKIA-IGGAQSKDYFDR---- 145
              EL  G  LF    G  +    D L  +ME++G   P  +A I    ++ Y       
Sbjct: 210 IMAELLQGKALF---PGSDYI---DQLKRIMEVVGTPSPEVLAKISSEHARTYIQSLPPM 263
Query: 146 -HGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPW 204
              DL  I    F   + L +D               L  +L    ++R +A + L H +
Sbjct: 264 PQKDLSSI----FRGANPLAID--------------LLGRMLVLDSDQRVSAAEALAHAY 305
Query: 205 LSLRNSTRDETKNKSNVEKVDVGMSKLE 232
            S  +   DE + +   E V+     LE
Sbjct: 306 FSQYHDPEDEPEAEPYDESVEAKERTLE 333

>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 59.7 bits (143), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 50/187 (26%), Positives = 83/187 (44%), Gaps = 28/187 (14%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQF--AEEIQTRQYRAPEVILRAGYSFSVDMWSFA 90
           KP   +   D   K++DFG A  A   F     + TR YRAPEVIL  GY  +VD+WS  
Sbjct: 153 KPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 212
Query: 91  CTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLK 150
               E+  G +LF            DH+    ++I ++       G  S ++  +     
Sbjct: 213 VIMGEMIKGGVLFP---------GTDHIDQWNKVIEQL-------GTPSPEFMKKLQPTV 256
Query: 151 RI---RRLKF--WSLDRLLVDKYRFSETD-----AREFAEFLVPLLDFTPEKRPTAQQCL 200
           R     R K+  +S ++L  D    ++++     A +  + L  +L     KR +  + L
Sbjct: 257 RTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEAL 316
Query: 201 QHPWLSL 207
           QHP++++
Sbjct: 317 QHPYINV 323

>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e) Length = 358

Iteration: 1
 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 53/195 (27%), Positives = 82/195 (42%), Gaps = 36/195 (18%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQ------FAEEIQTRQYRAPEVILRA-GYSFSVD 85
           KP   L       K+ DFG A  A+          E + TR YRAPE++L + GY+ S+D
Sbjct: 149 KPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSID 208
Query: 86  MWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDR 145
           +WS  C   E+ +   +F    G+ + +  +H+             + I G+  ++    
Sbjct: 209 IWSVGCILAEMLSNRPIFP---GKHYLDQLNHI-------------LGILGSPEQE---- 248
Query: 146 HGDLKRIRRLKFWSLDRLLVDKYR------FSETDAREFAEFLVPLLDFTPEKRPTAQQC 199
             DL  I  LK  +    L  K +      F   D++   + L  +L F P KR   +Q 
Sbjct: 249 --DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKAL-DLLDKMLTFNPHKRIEVEQA 305
Query: 200 LQHPWLSLRNSTRDE 214
           L HP+L       DE
Sbjct: 306 LAHPYLEQYYDPSDE 320

>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Length = 370

Iteration: 1
 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/178 (27%), Positives = 78/178 (43%), Gaps = 10/178 (5%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFA--EEIQTRQYRAPEVILRAGYSFSVDMWSFA 90
           KP   +   D   K++DFG A  A   F    E+ TR YRAPEVIL  GY  +VD+WS  
Sbjct: 153 KPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTRYYRAPEVILGMGYKENVDIWSVG 212
Query: 91  CTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGK-MPRKIAIGGAQSKDYFDRHGDL 149
           C   E+    +LF    G+ +    D    ++E +G   P  +       ++Y +     
Sbjct: 213 CIMGEMVCHKILFP---GRDYI---DQWNKVIEQLGTPCPAFMKKLQPTVRNYVENRPKY 266
Query: 150 KRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSL 207
                 K +  D L       ++  A +  + L  +L     KR +  + LQHP++++
Sbjct: 267 AGYSFEKLFP-DVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINV 323

>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a) Activating Mutant Length = 367

Iteration: 1
 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 50/186 (26%), Positives = 77/186 (41%), Gaps = 24/186 (12%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWSFAC 91
           KP       D   K++DFG A     +    + TR YRAPE++L    Y+ +VD+WS  C
Sbjct: 159 KPSNLAVNEDCELKILDFGLARHTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 218
Query: 92  TAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKI--AIGGAQSKDYFDRHGDL 149
              EL TG  LF         +  D L L++ L+G    ++   I    +++Y      +
Sbjct: 219 IMAELLTGRTLFPG------TDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQM 272
Query: 150 KRIRRLK-FWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLR 208
            ++     F   + L VD               L  +L    +KR TA Q L H + +  
Sbjct: 273 PKMNFANVFIGANPLAVD--------------LLEKMLVLDSDKRITAAQALAHAYFAQY 318
Query: 209 NSTRDE 214
           +   DE
Sbjct: 319 HDPDDE 324

>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s) Activating Mutant Form-A Length = 367

Iteration: 1
 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 81/189 (42%), Gaps = 30/189 (15%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWSFAC 91
           KP       D   K++DFG A     +    + TR YRAPE++L    Y+ +VD+WS  C
Sbjct: 159 KPSNLAVNEDCELKILDFGLARHTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 218
Query: 92  TAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKI--AIGGAQSKDYFDRHGDL 149
              EL TG  LF         +  D L L++ L+G    ++   I    +++Y      L
Sbjct: 219 IMAELLTGRTLFPG------TDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ---SL 269
Query: 150 KRIRRLKFWSL----DRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 205
            ++ ++ F ++    + L VD               L  +L    +KR TA Q L H + 
Sbjct: 270 TQMPKMNFANVFIGANPLAVD--------------LLEKMLVLDSDKRITAAQALAHAYF 315
Query: 206 SLRNSTRDE 214
           +  +   DE
Sbjct: 316 AQYHDPDDE 324

>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 50/189 (26%), Positives = 82/189 (43%), Gaps = 30/189 (15%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWSFAC 91
           KP       D   K++D+G A   + +    + TR YRAPE++L    Y+ +VD+WS  C
Sbjct: 152 KPSNLAVNEDCELKILDYGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 211
Query: 92  TAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKI--AIGGAQSKDYFDRHGDL 149
              EL TG  LF         +  D L L++ L+G    ++   I    +++Y      L
Sbjct: 212 IMAELLTGRTLFPG------TDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ---SL 262
Query: 150 KRIRRLKFWSL----DRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 205
            ++ ++ F ++    + L VD               L  +L    +KR TA Q L H + 
Sbjct: 263 TQMPKMNFANVFIGANPLAVD--------------LLEKMLVLDSDKRITAAQALAHAYF 308
Query: 206 SLRNSTRDE 214
           +  +   DE
Sbjct: 309 AQYHDPDDE 317

>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l) Activating Mutant Length = 367

Iteration: 1
 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 50/186 (26%), Positives = 77/186 (41%), Gaps = 24/186 (12%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWSFAC 91
           KP       D   K++DFG A     +    + TR YRAPE++L    Y+ +VD+WS  C
Sbjct: 159 KPSNLAVNEDCELKILDFGLARHTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 218
Query: 92  TAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKI--AIGGAQSKDYFDRHGDL 149
              EL TG  LF         +  D L L++ L+G    ++   I    +++Y      +
Sbjct: 219 IMAELLTGRTLFPG------TDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQM 272
Query: 150 KRIRRLK-FWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLR 208
            ++     F   + L VD               L  +L    +KR TA Q L H + +  
Sbjct: 273 PKMNFANVFIGANPLAVD--------------LLEKMLVLDSDKRITAAQALAHAYFAQY 318
Query: 209 NSTRDE 214
           +   DE
Sbjct: 319 HDPDDE 324

>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors Length = 370

Iteration: 1
 Score = 58.9 bits (141), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/178 (27%), Positives = 77/178 (43%), Gaps = 10/178 (5%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFA--EEIQTRQYRAPEVILRAGYSFSVDMWSFA 90
           KP   +   D   K++DFG A  A   F    E+ TR YRAPEVIL  GY  +VD+WS  
Sbjct: 153 KPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTRYYRAPEVILGMGYKENVDLWSVG 212
Query: 91  CTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGK-MPRKIAIGGAQSKDYFDRHGDL 149
           C   E+    +LF    G+ +    D    ++E +G   P  +       + Y +     
Sbjct: 213 CIMGEMVCHKILFP---GRDYI---DQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKY 266
Query: 150 KRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSL 207
                 K +  D L       ++  A +  + L  +L     KR +  + LQHP++++
Sbjct: 267 AGYSFEKLFP-DVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINV 323

>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580 Length = 360

Iteration: 1
 Score = 58.5 bits (140), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 50/189 (26%), Positives = 81/189 (42%), Gaps = 30/189 (15%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWSFAC 91
           KP       D   K++DFG     + +    + TR YRAPE++L    Y+ +VD+WS  C
Sbjct: 152 KPSNLAVNEDSELKILDFGLCRHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 211
Query: 92  TAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKI--AIGGAQSKDYFDRHGDL 149
              EL TG  LF         +  D L L++ L+G    ++   I    +++Y      L
Sbjct: 212 IMAELLTGRTLFPG------TDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ---SL 262
Query: 150 KRIRRLKFWSL----DRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 205
            ++ ++ F ++    + L VD               L  +L    +KR TA Q L H + 
Sbjct: 263 TQMPKMNFANVFIGANPLAVD--------------LLEKMLVLDSDKRITAAQALAHAYF 308
Query: 206 SLRNSTRDE 214
           +  +   DE
Sbjct: 309 AQYHDPDDE 317

>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From The Structures Cdk6-P19ink4d Inhibitor Complex Length = 326

Iteration: 1
 Score = 58.2 bits (139), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 53/181 (29%), Positives = 77/181 (42%), Gaps = 35/181 (19%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFA--EEIQTRQYRAPEVILRAGYSFSVDMWSFA 90
           KP+  L     + K+ DFG A   + Q A    + T  YRAPEV+L++ Y+  VD+WS  
Sbjct: 147 KPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVG 206
Query: 91  CTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIG-----KMPRKIAIGGAQSKDYFDR 145
           C   E+     LF   S      D D L  ++++IG       PR +A+           
Sbjct: 207 CIFAEMFRRKPLFRGSS------DVDQLGKILDVIGLPGEEDWPRDVALP---------- 250
Query: 146 HGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFA-EFLVPLLDFTPEKRPTAQQCLQHPW 204
                   R  F S     ++K+    TD  E   + L+  L F P KR +A   L HP+
Sbjct: 251 --------RQAFHSKSAQPIEKFV---TDIDELGKDLLLKCLTFNPAKRISAYSALSHPY 299
Query: 205 L 205
Sbjct: 300 F 300

>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor Length = 307

Iteration: 1
 Score = 57.8 bits (138), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 53/181 (29%), Positives = 77/181 (42%), Gaps = 35/181 (19%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFA--EEIQTRQYRAPEVILRAGYSFSVDMWSFA 90
           KP+  L     + K+ DFG A   + Q A    + T  YRAPEV+L++ Y+  VD+WS  
Sbjct: 147 KPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVG 206
Query: 91  CTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIG-----KMPRKIAIGGAQSKDYFDR 145
           C   E+     LF   S      D D L  ++++IG       PR +A+           
Sbjct: 207 CIFAEMFRRKPLFRGSS------DVDQLGKILDVIGLPGEEDWPRDVALP---------- 250
Query: 146 HGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFA-EFLVPLLDFTPEKRPTAQQCLQHPW 204
                   R  F S     ++K+    TD  E   + L+  L F P KR +A   L HP+
Sbjct: 251 --------RQAFHSKSAQPIEKF---VTDIDELGKDLLLKCLTFNPAKRISAYSALSHPY 299
Query: 205 L 205
Sbjct: 300 F 300

>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral Cyclin Length = 308

Iteration: 1
 Score = 57.8 bits (138), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 53/181 (29%), Positives = 77/181 (42%), Gaps = 35/181 (19%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFA--EEIQTRQYRAPEVILRAGYSFSVDMWSFA 90
           KP+  L     + K+ DFG A   + Q A    + T  YRAPEV+L++ Y+  VD+WS  
Sbjct: 147 KPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVG 206
Query: 91  CTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIG-----KMPRKIAIGGAQSKDYFDR 145
           C   E+     LF   S      D D L  ++++IG       PR +A+           
Sbjct: 207 CIFAEMFRRKPLFRGSS------DVDQLGKILDVIGLPGEEDWPRDVALP---------- 250
Query: 146 HGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFA-EFLVPLLDFTPEKRPTAQQCLQHPW 204
                   R  F S     ++K+    TD  E   + L+  L F P KR +A   L HP+
Sbjct: 251 --------RQAFHSKSAQPIEKF---VTDIDELGKDLLLKCLTFNPAKRISAYSALSHPY 299
Query: 205 L 205
Sbjct: 300 F 300

>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif Mutants In Response To Inhibitor Binding Length = 360

Iteration: 1
 Score = 57.8 bits (138), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 50/189 (26%), Positives = 81/189 (42%), Gaps = 30/189 (15%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWSFAC 91
           KP       D   K++ FG A   + +    + TR YRAPE++L    Y+ +VD+WS  C
Sbjct: 152 KPSNLAVNEDCELKILGFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 211
Query: 92  TAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKI--AIGGAQSKDYFDRHGDL 149
              EL TG  LF         +  D L L++ L+G    ++   I    +++Y      L
Sbjct: 212 IMAELLTGRTLFPG------TDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ---SL 262
Query: 150 KRIRRLKFWSL----DRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 205
            ++ ++ F ++    + L VD               L  +L    +KR TA Q L H + 
Sbjct: 263 TQMPKMNFANVFIGANPLAVD--------------LLEKMLVLDSDKRITAAQALAHAYF 308
Query: 206 SLRNSTRDE 214
           +  +   DE
Sbjct: 309 AQYHDPDDE 317

>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine Inhibitor Length = 369

Iteration: 1
 Score = 57.4 bits (137), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 48/178 (26%), Positives = 76/178 (42%), Gaps = 10/178 (5%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQF--AEEIQTRQYRAPEVILRAGYSFSVDMWSFA 90
           KP   +   D   K++DFG A  A   F     + TR YRAPEVIL  GY  +VD+WS  
Sbjct: 158 KPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDLWSVG 217
Query: 91  CTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGK-MPRKIAIGGAQSKDYFDRHGDL 149
           C   E+    +LF    G+ +    D    ++E +G   P  +       + Y +     
Sbjct: 218 CIMGEMVCHKILFP---GRDYI---DQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKY 271
Query: 150 KRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSL 207
                 K +  D L       ++  A +  + L  +L     KR +  + LQHP++++
Sbjct: 272 AGYSFEKLFP-DVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINV 328

>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Indirubin 3'-Monoxime Bound Length = 313

Iteration: 1
 Score = 57.0 bits (136), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 51/182 (28%), Positives = 82/182 (45%), Gaps = 32/182 (17%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRA----NKQFAEEIQTRQYRAPEVILRAG-YSFSVDMW 87
           KP+  L   D   K+ DFG A RA     + +  E+ T  YRAP+V++ +  YS SVD+W
Sbjct: 146 KPQNLLINSDGALKLADFGLA-RAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIW 204
Query: 88  SFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHG 147
           S  C   E+ TG  LF      G  +D+           ++P+  +I G  +        
Sbjct: 205 SIGCIFAEMITGKPLFP-----GVTDDD-----------QLPKIFSILGTPNPR------ 242
Query: 148 DLKRIRRLKFWSLDRLLV-DKYRFSETDA---REFAEFLVPLLDFTPEKRPTAQQCLQHP 203
           +  +++ L  W      V +K  +S       +E  + L  +L F P KR +A+  + HP
Sbjct: 243 EWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHP 302
Query: 204 WL 205
           + 
Sbjct: 303 YF 304

>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Adp Bound Length = 311

Iteration: 1
 Score = 57.0 bits (136), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 51/182 (28%), Positives = 82/182 (45%), Gaps = 32/182 (17%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRA----NKQFAEEIQTRQYRAPEVILRAG-YSFSVDMW 87
           KP+  L   D   K+ DFG A RA     + +  E+ T  YRAP+V++ +  YS SVD+W
Sbjct: 146 KPQNLLINSDGALKLADFGLA-RAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIW 204
Query: 88  SFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHG 147
           S  C   E+ TG  LF      G  +D+           ++P+  +I G  +        
Sbjct: 205 SIGCIFAEMITGKPLFP-----GVTDDD-----------QLPKIFSILGTPNPR------ 242
Query: 148 DLKRIRRLKFWSLDRLLV-DKYRFSETDA---REFAEFLVPLLDFTPEKRPTAQQCLQHP 203
           +  +++ L  W      V +K  +S       +E  + L  +L F P KR +A+  + HP
Sbjct: 243 EWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHP 302
Query: 204 WL 205
           + 
Sbjct: 303 YF 304

>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor Length = 358

Iteration: 1
 Score = 57.0 bits (136), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 48/178 (26%), Positives = 76/178 (42%), Gaps = 10/178 (5%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQF--AEEIQTRQYRAPEVILRAGYSFSVDMWSFA 90
           KP   +   D   K++DFG A  A   F     + TR YRAPEVIL  GY  +VD+WS  
Sbjct: 147 KPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDLWSVG 206
Query: 91  CTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGK-MPRKIAIGGAQSKDYFDRHGDL 149
           C   E+    +LF    G+ +    D    ++E +G   P  +       + Y +     
Sbjct: 207 CIMGEMVCHKILFP---GRDYI---DQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKY 260
Query: 150 KRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSL 207
                 K +  D L       ++  A +  + L  +L     KR +  + LQHP++++
Sbjct: 261 AGYSFEKLFP-DVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINV 317

>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 57.0 bits (136), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 50/189 (26%), Positives = 81/189 (42%), Gaps = 30/189 (15%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWSFAC 91
           KP       D   K++D G A   + +    + TR YRAPE++L    Y+ +VD+WS  C
Sbjct: 152 KPSNLAVNEDCELKILDAGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 211
Query: 92  TAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKI--AIGGAQSKDYFDRHGDL 149
              EL TG  LF         +  D L L++ L+G    ++   I    +++Y      L
Sbjct: 212 IMAELLTGRTLFPG------TDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ---SL 262
Query: 150 KRIRRLKFWSL----DRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 205
            ++ ++ F ++    + L VD               L  +L    +KR TA Q L H + 
Sbjct: 263 TQMPKMNFANVFIGANPLAVD--------------LLEKMLVLDSDKRITAAQALAHAYF 308
Query: 206 SLRNSTRDE 214
           +  +   DE
Sbjct: 309 AQYHDPDDE 317

>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In Complex With P38 Map Kinase Length = 360

Iteration: 1
 Score = 57.0 bits (136), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 50/189 (26%), Positives = 81/189 (42%), Gaps = 30/189 (15%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWSFAC 91
           KP       D   K++DF  A   + +    + TR YRAPE++L    Y+ +VD+WS  C
Sbjct: 152 KPSNLAVNEDCELKILDFYLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 211
Query: 92  TAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKI--AIGGAQSKDYFDRHGDL 149
              EL TG  LF         +  D L L++ L+G    ++   I    +++Y      L
Sbjct: 212 IMAELLTGRTLFPG------TDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ---SL 262
Query: 150 KRIRRLKFWSL----DRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 205
            ++ ++ F ++    + L VD               L  +L    +KR TA Q L H + 
Sbjct: 263 TQMPKMNFANVFIGANPLAVD--------------LLEKMLVLDSDKRITAAQALAHAYF 308
Query: 206 SLRNSTRDE 214
           +  +   DE
Sbjct: 309 AQYHDPDDE 317

>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis Length = 394

Iteration: 1
 Score = 57.0 bits (136), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 50/177 (28%), Positives = 80/177 (45%), Gaps = 23/177 (12%)
Query: 33  KPERCL-DGIDMRCKVVDFGNA--CRANKQFAEEIQTRQYRAPEVILRA-GYSFSVDMWS 88
           KP+  L D      K++DFG+A    A +     I +R YRAPE+I  A  Y+ ++D+WS
Sbjct: 168 KPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXICSRYYRAPELIFGATNYTTNIDIWS 227
Query: 89  FACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGD 148
             C   EL  G  LF  +SG       D L  +++++G   R+       + +Y +    
Sbjct: 228 TGCVMAELMQGQPLFPGESGI------DQLVEIIKVLGTPSREQI--KTMNPNYMEH--K 277
Query: 149 LKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 205
             +IR   F  +         F      +  + +  LL++TP  R TA + L HP+ 
Sbjct: 278 FPQIRPHPFSKV---------FRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFF 325

>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 50/189 (26%), Positives = 81/189 (42%), Gaps = 30/189 (15%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWSFAC 91
           KP       D   K++D G A   + +    + TR YRAPE++L    Y+ +VD+WS  C
Sbjct: 152 KPSNLAVNEDCELKILDGGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 211
Query: 92  TAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKI--AIGGAQSKDYFDRHGDL 149
              EL TG  LF         +  D L L++ L+G    ++   I    +++Y      L
Sbjct: 212 IMAELLTGRTLFPG------TDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ---SL 262
Query: 150 KRIRRLKFWSL----DRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 205
            ++ ++ F ++    + L VD               L  +L    +KR TA Q L H + 
Sbjct: 263 TQMPKMNFANVFIGANPLAVD--------------LLEKMLVLDSDKRITAAQALAHAYF 308
Query: 206 SLRNSTRDE 214
           +  +   DE
Sbjct: 309 AQYHDPDDE 317

>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 50/189 (26%), Positives = 81/189 (42%), Gaps = 30/189 (15%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWSFAC 91
           KP       D   K++D G A   + +    + TR YRAPE++L    Y+ +VD+WS  C
Sbjct: 152 KPSNLAVNEDCELKILDRGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 211
Query: 92  TAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKI--AIGGAQSKDYFDRHGDL 149
              EL TG  LF         +  D L L++ L+G    ++   I    +++Y      L
Sbjct: 212 IMAELLTGRTLFPG------TDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ---SL 262
Query: 150 KRIRRLKFWSL----DRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 205
            ++ ++ F ++    + L VD               L  +L    +KR TA Q L H + 
Sbjct: 263 TQMPKMNFANVFIGANPLAVD--------------LLEKMLVLDSDKRITAAQALAHAYF 308
Query: 206 SLRNSTRDE 214
           +  +   DE
Sbjct: 309 AQYHDPDDE 317

>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum, Cgd2_1960 Length = 388

Iteration: 1
 Score = 55.1 bits (131), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 44/171 (25%), Positives = 73/171 (42%), Gaps = 32/171 (18%)
Query: 60  FAEEIQTRQYRAPEVIL-RAGYSFSVDMWSFACTAFELATGDMLFAPKSGQG-------- 110
             + + TR YRAPE++L    Y+  +DMWS  C   E+  G  +F   S           
Sbjct: 187 LTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERIIGV 246
Query: 111 --FCEDEDHLALMM----ELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLL 164
             F  +ED  ++       +I  +  K+ I  +  +D F +            W    L 
Sbjct: 247 IDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTK------------WKNLLLK 294
Query: 165 VDKYRFSETDAREFA-EFLVPLLDFTPEKRPTAQQCLQHPWLSLRNSTRDE 214
           ++     + D  E A + L  LL F P KR +A   L+HP++S+ ++  +E
Sbjct: 295 IN----PKADCNEEALDLLDKLLQFNPNKRISANDALKHPFVSIFHNPNEE 341

>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 6 (Mapk6) Length = 320

Iteration: 1
 Score = 54.7 bits (130), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 46/180 (25%), Positives = 80/180 (44%), Gaps = 25/180 (13%)
Query: 42  DMRCKVVDFGNACRANKQFA------EEIQTRQYRAPEVILRAG-YSFSVDMWSFACTAF 94
           D+  K+ DFG A   +  ++      E + T+ YR+P ++L    Y+ ++DMW+  C   
Sbjct: 157 DLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFA 216
Query: 95  ELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRR 154
           E+ TG  LFA         + + + L++E I  +  +            DR   L  I  
Sbjct: 217 EMLTGKTLFAG------AHELEQMQLILESIPVVHEE------------DRQELLSVIPV 258
Query: 155 LKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNSTRDE 214
                +        +     +RE  +FL  +L F+P  R TA++ L HP++S+ +   DE
Sbjct: 259 YIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSHPYMSIYSFPMDE 318

>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With Ind E804 Length = 324

Iteration: 1
 Score = 54.7 bits (130), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 55/181 (30%), Positives = 82/181 (45%), Gaps = 25/181 (13%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRA----NKQFAEEIQTRQYRAPEVIL-RAGYSFSVDMW 87
           KP+  L       K+ DFG A RA     K +  E+ T  YR P+++L    YS  +DMW
Sbjct: 127 KPQNLLINERGELKLADFGLA-RAKSIPTKTYDNEVVTLWYRPPDILLGSTDYSTQIDMW 185
Query: 88  SFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHG 147
              C  +E+ATG  LF P S       E+ L  +  ++G  P +    G  S + F  + 
Sbjct: 186 GVGCIFYEMATGRPLF-PGSTV-----EEQLHFIFRILG-TPTEETWPGILSNEEFKTYN 238
Query: 148 DLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHP-WLS 206
             K       +  + LL    R  ++D    A+ L  LL F    R +A+  ++HP +LS
Sbjct: 239 YPK-------YRAEALLSHAPRL-DSDG---ADLLTKLLQFEGRNRISAEDAMKHPFFLS 287
Query: 207 L 207
           L
Sbjct: 288 L 288

>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 54.7 bits (130), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 54/179 (30%), Positives = 75/179 (41%), Gaps = 31/179 (17%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQ--FAEEIQTRQYRAPEVILRAGYSFSVDMWSFA 90
           KPE  L       K+ DFG A   + Q   A  + T  YRAPEV+L++ Y+  VDMWS  
Sbjct: 139 KPENILVTSGGTVKLADFGLARIYSYQMALAPVVVTLWYRAPEVLLQSTYATPVDMWSVG 198
Query: 91  CTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLK 150
           C   E+     LF   S      + D L  + +LIG  P          +D + R   L 
Sbjct: 199 CIFAEMFRRKPLFCGNS------EADQLGKIFDLIGLPP----------EDDWPRDVSLP 242
Query: 151 RIRRLKFWSLDRLLVDKYRFSETDAREF----AEFLVPLLDFTPEKRPTAQQCLQHPWL 205
           R                 R  ++   E     A+ L+ +L F P KR +A + LQH +L
Sbjct: 243 R---------GAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYL 292

>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 54.7 bits (130), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 54/179 (30%), Positives = 76/179 (42%), Gaps = 31/179 (17%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEE--IQTRQYRAPEVILRAGYSFSVDMWSFA 90
           KPE  L       K+ DFG A   + Q A +  + T  YRAPEV+L++ Y+  VDMWS  
Sbjct: 139 KPENILVTSGGTVKLADFGLARIYSYQMALDPVVVTLWYRAPEVLLQSTYATPVDMWSVG 198
Query: 91  CTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLK 150
           C   E+     LF   S      + D L  + +LIG  P          +D + R   L 
Sbjct: 199 CIFAEMFRRKPLFCGNS------EADQLGKIFDLIGLPP----------EDDWPRDVSLP 242
Query: 151 RIRRLKFWSLDRLLVDKYRFSETDAREF----AEFLVPLLDFTPEKRPTAQQCLQHPWL 205
           R                 R  ++   E     A+ L+ +L F P KR +A + LQH +L
Sbjct: 243 R---------GAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYL 292

>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3 Length = 308

Iteration: 1
 Score = 54.3 bits (129), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 54/179 (30%), Positives = 75/179 (41%), Gaps = 31/179 (17%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFA--EEIQTRQYRAPEVILRAGYSFSVDMWSFA 90
           KPE  L       K+ DFG A   + Q A    + T  YRAPEV+L++ Y+  VDMWS  
Sbjct: 147 KPENILVTSGGTVKLADFGLARIYSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVG 206
Query: 91  CTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLK 150
           C   E+     LF   S      + D L  + +LIG  P          +D + R   L 
Sbjct: 207 CIFAEMFRRKPLFCGNS------EADQLGKIFDLIGLPP----------EDDWPRDVSLP 250
Query: 151 RIRRLKFWSLDRLLVDKYRFSETDAREF----AEFLVPLLDFTPEKRPTAQQCLQHPWL 205
           R                 R  ++   E     A+ L+ +L F P KR +A + LQH +L
Sbjct: 251 R---------GAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYL 300

>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 54.3 bits (129), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 54/179 (30%), Positives = 75/179 (41%), Gaps = 31/179 (17%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFA--EEIQTRQYRAPEVILRAGYSFSVDMWSFA 90
           KPE  L       K+ DFG A   + Q A    + T  YRAPEV+L++ Y+  VDMWS  
Sbjct: 139 KPENILVTSGGTVKLADFGLARIYSYQMALFPVVVTLWYRAPEVLLQSTYATPVDMWSVG 198
Query: 91  CTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLK 150
           C   E+     LF   S      + D L  + +LIG  P          +D + R   L 
Sbjct: 199 CIFAEMFRRKPLFCGNS------EADQLGKIFDLIGLPP----------EDDWPRDVSLP 242
Query: 151 RIRRLKFWSLDRLLVDKYRFSETDAREF----AEFLVPLLDFTPEKRPTAQQCLQHPWL 205
           R                 R  ++   E     A+ L+ +L F P KR +A + LQH +L
Sbjct: 243 R---------GAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYL 292

>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei, Pb000659.00.0 Length = 432

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 54/221 (24%), Positives = 80/221 (36%), Gaps = 59/221 (26%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRAN-------------------------KQFAEEIQTR 67
           KP  CL   D   KV DFG A   N                         KQ    + TR
Sbjct: 156 KPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTR 215
Query: 68  QYRAPEVI-LRAGYSFSVDMWSFAC-----------------TAFELATGDMLF--APKS 107
            YRAPE+I L+  Y+ S+D+WS  C                   F L  G   F  +P  
Sbjct: 216 WYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFPLFPGSSCFPLSPDR 275
Query: 108 GQGFCEDE---DHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLL 164
                 ++   D L ++  +I          G  ++D        + I+ +K +   + +
Sbjct: 276 NSKKVHEKSNRDQLNIIFNII----------GTPTEDDLKNINKPEVIKYIKLFPHRKPI 325
Query: 165 VDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 205
             K ++    + +    L  +L F P KR T  Q L HP+L
Sbjct: 326 NLKQKYPSI-SDDGINLLESMLKFNPNKRITIDQALDHPYL 365

>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A Diaminopyrimidine Length = 281

Iteration: 1
 Score = 51.2 bits (121), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 48/192 (25%), Positives = 74/192 (38%), Gaps = 49/192 (25%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQ-TRQYRAPEVILRAGYSFSVDMWSFAC 91
           KPE  L G     K+ DFG +C A       +  T  Y  PE+I    +   VD+WS   
Sbjct: 136 KPENLLLGSAGELKIADFGWSCHAPSSRRTTLSGTLDYLPPEMIEGRMHDEKVDLWSLGV 195
Query: 92  TAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKR 151
             +E                            L+GK P        ++  Y + +   KR
Sbjct: 196 LCYEF---------------------------LVGKPP-------FEANTYQETY---KR 218
Query: 152 IRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNST 211
           I R++F   D        F    AR   + +  LL   P +RP  ++ L+HPW++  +S 
Sbjct: 219 ISRVEFTFPD--------FVTEGAR---DLISRLLKHNPSQRPMLREVLEHPWITANSSK 267
Query: 212 RDETKNKSNVEK 223
              ++NK +  K
Sbjct: 268 PSNSQNKESASK 279

>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major Length = 360

Iteration: 1
 Score = 51.2 bits (121), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 54/194 (27%), Positives = 85/194 (43%), Gaps = 29/194 (14%)
Query: 25  SMGGIELP---------KPERCL-DGIDMRCKVVDFGNACR--ANKQFAEEIQTRQYRAP 72
           S+G + LP         KP   L +  D   K+ DFG+A +   ++     I +R YRAP
Sbjct: 141 SIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAYICSRYYRAP 200
Query: 73  EVIL-RAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRK 131
           E+I     Y+ +VD+WS  C   E+  G+ +F   +  G       L  ++ ++G   R+
Sbjct: 201 ELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAG------QLHEIVRVLGCPSRE 254
Query: 132 IAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPE 191
           +      S    D +   K I     WS   +  D    S  DA+E  + L  LL + PE
Sbjct: 255 VLRKLNPSHTDVDLYNS-KGIP----WS--NVFSDH---SLKDAKEAYDLLSALLQYLPE 304
Query: 192 KRPTAQQCLQHPWL 205
           +R    + L HP+ 
Sbjct: 305 ERMKPYEALCHPYF 318

>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human Rsk-1 Bound To Amp-Pcp Length = 321

Iteration: 1
 Score = 51.2 bits (121), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 29/77 (37%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
Query: 33  KPERCLDGIDMRCKVVDFG---NACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSF 89
           KPE  L   +   K+ DFG    A    K+      T +Y APEV+ R G+S S D WS+
Sbjct: 157 KPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEYMAPEVVNRQGHSHSADWWSY 216
Query: 90  ACTAFELATGDMLFAPK 106
               FE+ TG + F  K
Sbjct: 217 GVLMFEMLTGSLPFQGK 233

>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147 Length = 429

Iteration: 1
 Score = 51.2 bits (121), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 59/248 (23%), Positives = 88/248 (35%), Gaps = 75/248 (30%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRAN----------------------------KQFAEEI 64
           KP  CL   D   K+ DFG A   N                            KQ    +
Sbjct: 158 KPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLEEKEENEEPGPHNKNLKKQLTSHV 217
Query: 65  QTRQYRAPEVI-LRAGYSFSVDMWSFAC-----------------TAFELATGDMLF--A 104
            TR YRAPE+I L+  Y+ S+D+WS  C                   F L  G   F  +
Sbjct: 218 VTRWYRAPELILLQENYTNSIDIWSTGCIFAELLNMMKSHINNPTNRFPLFPGSSCFPLS 277
Query: 105 PKSGQGFCEDE---DHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLD 161
           P        ++   D L ++  +IG  P +                DLK I + +     
Sbjct: 278 PDHNSKKVHEKSNRDQLNIIFNVIGTPPEE----------------DLKCITKQEVIKYI 321
Query: 162 RLL-----VDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNSTRDETK 216
           +L      +D  +   + ++E  + L  +L F  +KR T  + L HP+L      R E  
Sbjct: 322 KLFPTRDGIDLSKKYSSISKEGIDLLESMLRFNAQKRITIDKALSHPYLK---DVRKENL 378
Query: 217 NKSNVEKV 224
              + EK+
Sbjct: 379 ENFSTEKI 386

>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 51.2 bits (121), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 52/178 (29%), Positives = 75/178 (42%), Gaps = 25/178 (14%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRA----NKQFAEEIQTRQYRAPEVILRAGY-SFSVDMW 87
           KPE  L   +   K+ DFG A RA     + +  E+ T  YRAPE++L   Y S +VD+W
Sbjct: 131 KPENLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIW 189
Query: 88  SFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHG 147
           S  C   E+ T   LF   S      + D L  +   +G  P ++   G  S    D   
Sbjct: 190 SLGCIFAEMVTRRALFPGDS------EIDQLFRIFRTLGT-PDEVVWPGVTSMP--DYKP 240
Query: 148 DLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 205
              +  R  F  +   L       + D R     L  +L + P KR +A+  L HP+ 
Sbjct: 241 SFPKWARQDFSKVVPPL-------DEDGR---SLLSQMLHYDPNKRISAKAALAHPFF 288

>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score = 51.2 bits (121), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 52/178 (29%), Positives = 75/178 (42%), Gaps = 25/178 (14%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRA----NKQFAEEIQTRQYRAPEVILRAGY-SFSVDMW 87
           KPE  L   +   K+ DFG A RA     + +  E+ T  YRAPE++L   Y S +VD+W
Sbjct: 133 KPENLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIW 191
Query: 88  SFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHG 147
           S  C   E+ T   LF   S      + D L  +   +G  P ++   G  S    D   
Sbjct: 192 SLGCIFAEMVTRRALFPGDS------EIDQLFRIFRTLGT-PDEVVWPGVTSMP--DYKP 242
Query: 148 DLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 205
              +  R  F  +   L       + D R     L  +L + P KR +A+  L HP+ 
Sbjct: 243 SFPKWARQDFSKVVPPL-------DEDGR---SLLSQMLHYDPNKRISAKAALAHPFF 290

>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With Atp Length = 299

Iteration: 1
 Score = 50.8 bits (120), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 52/178 (29%), Positives = 75/178 (42%), Gaps = 25/178 (14%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRA----NKQFAEEIQTRQYRAPEVILRAGY-SFSVDMW 87
           KPE  L   +   K+ DFG A RA     + +  E+ T  YRAPE++L   Y S +VD+W
Sbjct: 131 KPENLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIW 189
Query: 88  SFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHG 147
           S  C   E+ T   LF   S      + D L  +   +G  P ++   G  S    D   
Sbjct: 190 SLGCIFAEMVTRRALFPGDS------EIDQLFRIFRTLGT-PDEVVWPGVTSMP--DYKP 240
Query: 148 DLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 205
              +  R  F  +   L       + D R     L  +L + P KR +A+  L HP+ 
Sbjct: 241 SFPKWARQDFSKVVPPL-------DEDGR---SLLSQMLHYDPNKRISAKAALAHPFF 288

>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 50.8 bits (120), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 52/178 (29%), Positives = 75/178 (42%), Gaps = 25/178 (14%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRA----NKQFAEEIQTRQYRAPEVILRAGY-SFSVDMW 87
           KPE  L   +   K+ DFG A RA     + +  E+ T  YRAPE++L   Y S +VD+W
Sbjct: 132 KPENLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIW 190
Query: 88  SFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHG 147
           S  C   E+ T   LF   S      + D L  +   +G  P ++   G  S    D   
Sbjct: 191 SLGCIFAEMVTRRALFPGDS------EIDQLFRIFRTLGT-PDEVVWPGVTSMP--DYKP 241
Query: 148 DLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 205
              +  R  F  +   L       + D R     L  +L + P KR +A+  L HP+ 
Sbjct: 242 SFPKWARQDFSKVVPPL-------DEDGR---SLLSQMLHYDPNKRISAKAALAHPFF 289

>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 299

Iteration: 1
 Score = 50.8 bits (120), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 52/178 (29%), Positives = 75/178 (42%), Gaps = 25/178 (14%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRA----NKQFAEEIQTRQYRAPEVILRAGY-SFSVDMW 87
           KPE  L   +   K+ DFG A RA     + +  E+ T  YRAPE++L   Y S +VD+W
Sbjct: 130 KPENLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIW 188
Query: 88  SFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHG 147
           S  C   E+ T   LF   S      + D L  +   +G  P ++   G  S    D   
Sbjct: 189 SLGCIFAEMVTRRALFPGDS------EIDQLFRIFRTLGT-PDEVVWPGVTSMP--DYKP 239
Query: 148 DLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 205
              +  R  F  +   L       + D R     L  +L + P KR +A+  L HP+ 
Sbjct: 240 SFPKWARQDFSKVVPPL-------DEDGR---SLLSQMLHYDPNKRISAKAALAHPFF 287

>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine Length = 299

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 51/178 (28%), Positives = 75/178 (42%), Gaps = 25/178 (14%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRA----NKQFAEEIQTRQYRAPEVIL-RAGYSFSVDMW 87
           KP+  L   +   K+ DFG A RA     + +  E+ T  YRAPE++L    YS +VD+W
Sbjct: 130 KPQNLLINTEGAIKLADFGLA-RAFGVPVRTYTHEVVTLWYRAPEILLGXKYYSTAVDIW 188
Query: 88  SFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHG 147
           S  C   E+ T   LF   S      + D L  +   +G  P ++   G  S    D   
Sbjct: 189 SLGCIFAEMVTRRALFPGDS------EIDQLFRIFRTLGT-PDEVVWPGVTSMP--DYKP 239
Query: 148 DLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 205
              +  R  F  +   L       + D R     L  +L + P KR +A+  L HP+ 
Sbjct: 240 SFPKWARQDFSKVVPPL-------DEDGR---SLLSQMLHYDPNKRISAKAALAHPFF 287

>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine Length = 306

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 51/178 (28%), Positives = 75/178 (42%), Gaps = 25/178 (14%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRA----NKQFAEEIQTRQYRAPEVIL-RAGYSFSVDMW 87
           KP+  L   +   K+ DFG A RA     + +  E+ T  YRAPE++L    YS +VD+W
Sbjct: 137 KPQNLLINTEGAIKLADFGLA-RAFGVPVRTYTHEVVTLWYRAPEILLGXKYYSTAVDIW 195
Query: 88  SFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHG 147
           S  C   E+ T   LF   S      + D L  +   +G  P ++   G  S    D   
Sbjct: 196 SLGCIFAEMVTRRALFPGDS------EIDQLFRIFRTLGT-PDEVVWPGVTSMP--DYKP 246
Query: 148 DLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 205
              +  R  F  +   L       + D R     L  +L + P KR +A+  L HP+ 
Sbjct: 247 SFPKWARQDFSKVVPPL-------DEDGR---SLLSQMLHYDPNKRISAKAALAHPFF 294

>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of 8-Anilino-1-Naphthalene Sulfonate Length = 306

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 51/178 (28%), Positives = 75/178 (42%), Gaps = 25/178 (14%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRA----NKQFAEEIQTRQYRAPEVILRAGY-SFSVDMW 87
           KP+  L   +   K+ DFG A RA     + +  E+ T  YRAPE++L   Y S +VD+W
Sbjct: 137 KPQNLLINTEGAIKLADFGLA-RAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIW 195
Query: 88  SFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHG 147
           S  C   E+ T   LF   S      + D L  +   +G  P ++   G  S    D   
Sbjct: 196 SLGCIFAEMVTRRALFPGDS------EIDQLFRIFRTLGT-PDEVVWPGVTSMP--DYKP 246
Query: 148 DLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 205
              +  R  F  +   L       + D R     L  +L + P KR +A+  L HP+ 
Sbjct: 247 SFPKWARQDFSKVVPPL-------DEDGR---SLLSQMLHYDPNKRISAKAALAHPFF 294

>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site Length = 300

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 51/178 (28%), Positives = 75/178 (42%), Gaps = 25/178 (14%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRA----NKQFAEEIQTRQYRAPEVILRAGY-SFSVDMW 87
           KP+  L   +   K+ DFG A RA     + +  E+ T  YRAPE++L   Y S +VD+W
Sbjct: 131 KPQNLLINTEGAIKLADFGLA-RAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIW 189
Query: 88  SFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHG 147
           S  C   E+ T   LF   S      + D L  +   +G  P ++   G  S    D   
Sbjct: 190 SLGCIFAEMVTRRALFPGDS------EIDQLFRIFRTLGT-PDEVVWPGVTSMP--DYKP 240
Query: 148 DLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 205
              +  R  F  +   L       + D R     L  +L + P KR +A+  L HP+ 
Sbjct: 241 SFPKWARQDFSKVVPPL-------DEDGR---SLLSQMLHYDPNKRISAKAALAHPFF 288

>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4 Inhibitor Length = 298

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 51/178 (28%), Positives = 75/178 (42%), Gaps = 25/178 (14%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRA----NKQFAEEIQTRQYRAPEVILRAGY-SFSVDMW 87
           KP+  L   +   K+ DFG A RA     + +  E+ T  YRAPE++L   Y S +VD+W
Sbjct: 129 KPQNLLINTEGAIKLADFGLA-RAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIW 187
Query: 88  SFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHG 147
           S  C   E+ T   LF   S      + D L  +   +G  P ++   G  S    D   
Sbjct: 188 SLGCIFAEMVTRRALFPGDS------EIDQLFRIFRTLGT-PDEVVWPGVTSMP--DYKP 238
Query: 148 DLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 205
              +  R  F  +   L       + D R     L  +L + P KR +A+  L HP+ 
Sbjct: 239 SFPKWARQDFSKVVPPL-------DEDGR---SLLSQMLHYDPNKRISAKAALAHPFF 286

>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-Dependent Kinase Inhibitors Identified Through Structure-Based Hybridisation Length = 299

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 51/178 (28%), Positives = 75/178 (42%), Gaps = 25/178 (14%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRA----NKQFAEEIQTRQYRAPEVILRAGY-SFSVDMW 87
           KP+  L   +   K+ DFG A RA     + +  E+ T  YRAPE++L   Y S +VD+W
Sbjct: 130 KPQNLLINTEGAIKLADFGLA-RAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIW 188
Query: 88  SFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHG 147
           S  C   E+ T   LF   S      + D L  +   +G  P ++   G  S    D   
Sbjct: 189 SLGCIFAEMVTRRALFPGDS------EIDQLFRIFRTLGT-PDEVVWPGVTSMP--DYKP 239
Query: 148 DLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 205
              +  R  F  +   L       + D R     L  +L + P KR +A+  L HP+ 
Sbjct: 240 SFPKWARQDFSKVVPPL-------DEDGR---SLLSQMLHYDPNKRISAKAALAHPFF 287

>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino Pyrimidine Cdk4 Inhibitor Length = 298

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 51/178 (28%), Positives = 75/178 (42%), Gaps = 25/178 (14%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRA----NKQFAEEIQTRQYRAPEVILRAGY-SFSVDMW 87
           KP+  L   +   K+ DFG A RA     + +  E+ T  YRAPE++L   Y S +VD+W
Sbjct: 129 KPQNLLINTEGAIKLADFGLA-RAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIW 187
Query: 88  SFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHG 147
           S  C   E+ T   LF   S      + D L  +   +G  P ++   G  S    D   
Sbjct: 188 SLGCIFAEMVTRRALFPGDS------EIDQLFRIFRTLGT-PDEVVWPGVTSMP--DYKP 238
Query: 148 DLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 205
              +  R  F  +   L       + D R     L  +L + P KR +A+  L HP+ 
Sbjct: 239 SFPKWARQDFSKVVPPL-------DEDGR---SLLSQMLHYDPNKRISAKAALAHPFF 286

>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine Length = 299

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 51/178 (28%), Positives = 75/178 (42%), Gaps = 25/178 (14%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRA----NKQFAEEIQTRQYRAPEVILRAGY-SFSVDMW 87
           KP+  L   +   K+ DFG A RA     + +  E+ T  YRAPE++L   Y S +VD+W
Sbjct: 130 KPQNLLINTEGAIKLADFGLA-RAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIW 188
Query: 88  SFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHG 147
           S  C   E+ T   LF   S      + D L  +   +G  P ++   G  S    D   
Sbjct: 189 SLGCIFAEMVTRRALFPGDS------EIDQLFRIFRTLGT-PDEVVWPGVTSMP--DYKP 239
Query: 148 DLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 205
              +  R  F  +   L       + D R     L  +L + P KR +A+  L HP+ 
Sbjct: 240 SFPKWARQDFSKVVPPL-------DEDGR---SLLSQMLHYDPNKRISAKAALAHPFF 287

>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5 Length = 288

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 51/185 (27%), Positives = 77/185 (41%), Gaps = 31/185 (16%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRA----NKQFAEEIQTRQYRAPEVILRA-GYSFSVDMW 87
           KP+  L   +   K+ DFG A RA     +++  EI T  YRAP+V++ +  YS ++D+W
Sbjct: 127 KPQNLLINREGELKIADFGLA-RAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIW 185
Query: 88  SFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDY---FD 144
           S  C   E+  G  LF   S      + D L  +  ++G    K      +   Y   F 
Sbjct: 186 SVGCIFAEMVNGTPLFPGVS------EADQLMRIFRILGTPNSKNWPNVTELPKYDPNFT 239
Query: 145 RHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPW 204
            +  L     LK   LD   +D               L  +L   P +R TA+Q L+H +
Sbjct: 240 VYEPLPWESFLK--GLDESGID--------------LLSKMLKLDPNQRITAKQALEHAY 283
Query: 205 LSLRN 209
               N
Sbjct: 284 FKENN 288

>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-dependent Kinase Inhibitors Identified Through Structure-based Hybridisation Length = 299

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 51/178 (28%), Positives = 75/178 (42%), Gaps = 25/178 (14%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRA----NKQFAEEIQTRQYRAPEVILRAGY-SFSVDMW 87
           KP+  L   +   K+ DFG A RA     + +  E+ T  YRAPE++L   Y S +VD+W
Sbjct: 130 KPQNLLINTEGAIKLADFGLA-RAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIW 188
Query: 88  SFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHG 147
           S  C   E+ T   LF   S      + D L  +   +G  P ++   G  S    D   
Sbjct: 189 SLGCIFAEMVTRRALFPGDS------EIDQLFRIFRTLGT-PDEVVWPGVTSMP--DYKP 239
Query: 148 DLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 205
              +  R  F  +   L       + D R     L  +L + P KR +A+  L HP+ 
Sbjct: 240 SFPKWARQDFSKVVPPL-------DEDGR---SLLSQMLHYDPNKRISAKAALAHPFF 287

>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex With An Mkk5 Binding Fragment Length = 442

Iteration: 1
 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 51/192 (26%), Positives = 79/192 (41%), Gaps = 29/192 (15%)
Query: 33  KPERCLDGIDMRCKVVDFGNA-----CRANKQF--AEEIQTRQYRAPEVILRAG-YSFSV 84
           KP   L   +   K+ DFG A       A  Q+   E + TR YRAPE++L    Y+ ++
Sbjct: 186 KPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAI 245
Query: 85  DMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKI--AIGGAQSKDY 142
           D+WS  C   E+     LF    G+ +      L L+M ++G     +  A+G  + + Y
Sbjct: 246 DLWSVGCIFGEMLARRQLF---PGKNYVH---QLQLIMMVLGTPSPAVIQAVGAERVRAY 299
Query: 143 FDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQH 202
                     R+   W       D+   S          L  +L F P  R +A   L+H
Sbjct: 300 IQSLPP----RQPVPWETVYPGADRQALS---------LLGRMLRFEPSARISAAAALRH 346
Query: 203 PWLSLRNSTRDE 214
           P+L+  +   DE
Sbjct: 347 PFLAKYHDPDDE 358

>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide, Compound (S)-8b Length = 299

Iteration: 1
 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 51/178 (28%), Positives = 75/178 (42%), Gaps = 25/178 (14%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRA----NKQFAEEIQTRQYRAPEVILRAGY-SFSVDMW 87
           KP+  L   +   K+ DFG A RA     + +  E+ T  YRAPE++L   Y S +VD+W
Sbjct: 130 KPQNLLINTEGAIKLADFGLA-RAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIW 188
Query: 88  SFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHG 147
           S  C   E+ T   LF   S      + D L  +   +G  P ++   G  S    D   
Sbjct: 189 SLGCIFAEMVTRRALFPGDS------EIDQLFRIFRTLGT-PDEVVWPGVTSMP--DYKP 239
Query: 148 DLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 205
              +  R  F  +   L       + D R     L  +L + P KR +A+  L HP+ 
Sbjct: 240 SFPKWARQDFSKVVPPL-------DEDGR---SLLSQMLHYDPNKRISAKAALAHPFF 287

>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex Length = 298

Iteration: 1
 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 51/178 (28%), Positives = 75/178 (42%), Gaps = 25/178 (14%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRA----NKQFAEEIQTRQYRAPEVILRAGY-SFSVDMW 87
           KP+  L   +   K+ DFG A RA     + +  E+ T  YRAPE++L   Y S +VD+W
Sbjct: 129 KPQNLLINTEGAIKLADFGLA-RAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIW 187
Query: 88  SFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHG 147
           S  C   E+ T   LF   S      + D L  +   +G  P ++   G  S    D   
Sbjct: 188 SLGCIFAEMVTRRALFPGDS------EIDQLFRIFRTLGT-PDEVVWPGVTSMP--DYKP 238
Query: 148 DLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 205
              +  R  F  +   L       + D R     L  +L + P KR +A+  L HP+ 
Sbjct: 239 SFPKWARQDFSKVVPPL-------DEDGR---SLLSQMLHYDPNKRISAKAALAHPFF 286

>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2 Complexed With A Nucleoside Inhibitor Length = 298

Iteration: 1
 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 51/178 (28%), Positives = 75/178 (42%), Gaps = 25/178 (14%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRA----NKQFAEEIQTRQYRAPEVILRAGY-SFSVDMW 87
           KP+  L   +   K+ DFG A RA     + +  E+ T  YRAPE++L   Y S +VD+W
Sbjct: 129 KPQNLLINTEGAIKLADFGLA-RAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIW 187
Query: 88  SFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHG 147
           S  C   E+ T   LF   S      + D L  +   +G  P ++   G  S    D   
Sbjct: 188 SLGCIFAEMVTRRALFPGDS------EIDQLFRIFRTLGT-PDEVVWPGVTSMP--DYKP 238
Query: 148 DLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 205
              +  R  F  +   L       + D R     L  +L + P KR +A+  L HP+ 
Sbjct: 239 SFPKWARQDFSKVVPPL-------DEDGR---SLLSQMLHYDPNKRISAKAALAHPFF 286

>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With The Inhibitor Nu6102 Length = 300

Iteration: 1
 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 51/178 (28%), Positives = 75/178 (42%), Gaps = 25/178 (14%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRA----NKQFAEEIQTRQYRAPEVILRAGY-SFSVDMW 87
           KP+  L   +   K+ DFG A RA     + +  E+ T  YRAPE++L   Y S +VD+W
Sbjct: 132 KPQNLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIW 190
Query: 88  SFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHG 147
           S  C   E+ T   LF   S      + D L  +   +G  P ++   G  S    D   
Sbjct: 191 SLGCIFAEMVTRRALFPGDS------EIDQLFRIFRTLGT-PDEVVWPGVTSMP--DYKP 241
Query: 148 DLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 205
              +  R  F  +   L       + D R     L  +L + P KR +A+  L HP+ 
Sbjct: 242 SFPKWARQDFSKVVPPL-------DEDGR---SLLSQMLHYDPNKRISAKAALAHPFF 289

>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137 Length = 309

Iteration: 1
 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 51/178 (28%), Positives = 75/178 (42%), Gaps = 25/178 (14%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRA----NKQFAEEIQTRQYRAPEVILRAGY-SFSVDMW 87
           KP+  L   +   K+ DFG A RA     + +  E+ T  YRAPE++L   Y S +VD+W
Sbjct: 134 KPQNLLINTEGAIKLADFGLA-RAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIW 192
Query: 88  SFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHG 147
           S  C   E+ T   LF   S      + D L  +   +G  P ++   G  S    D   
Sbjct: 193 SLGCIFAEMVTRRALFPGDS------EIDQLFRIFRTLGT-PDEVVWPGVTSMP--DYKP 243
Query: 148 DLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 205
              +  R  F  +   L       + D R     L  +L + P KR +A+  L HP+ 
Sbjct: 244 SFPKWARQDFSKVVPPL-------DEDGR---SLLSQMLHYDPNKRISAKAALAHPFF 291

>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor Length = 398

Iteration: 1
 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 51/192 (26%), Positives = 79/192 (41%), Gaps = 29/192 (15%)
Query: 33  KPERCLDGIDMRCKVVDFGNA-----CRANKQF--AEEIQTRQYRAPEVILRAG-YSFSV 84
           KP   L   +   K+ DFG A       A  Q+   E + TR YRAPE++L    Y+ ++
Sbjct: 185 KPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAI 244
Query: 85  DMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKI--AIGGAQSKDY 142
           D+WS  C   E+     LF    G+ +      L L+M ++G     +  A+G  + + Y
Sbjct: 245 DLWSVGCIFGEMLARRQLF---PGKNYVH---QLQLIMMVLGTPSPAVIQAVGAERVRAY 298
Query: 143 FDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQH 202
                     R+   W       D+   S          L  +L F P  R +A   L+H
Sbjct: 299 IQSLPP----RQPVPWETVYPGADRQALS---------LLGRMLRFEPSARISAAAALRH 345
Query: 203 PWLSLRNSTRDE 214
           P+L+  +   DE
Sbjct: 346 PFLAKYHDPDDE 357

>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED With The Inhibitor Nu2058 Length = 303

Iteration: 1
 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 51/178 (28%), Positives = 75/178 (42%), Gaps = 25/178 (14%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRA----NKQFAEEIQTRQYRAPEVILRAGY-SFSVDMW 87
           KP+  L   +   K+ DFG A RA     + +  E+ T  YRAPE++L   Y S +VD+W
Sbjct: 134 KPQNLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIW 192
Query: 88  SFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHG 147
           S  C   E+ T   LF   S      + D L  +   +G  P ++   G  S    D   
Sbjct: 193 SLGCIFAEMVTRRALFPGDS------EIDQLFRIFRTLGT-PDEVVWPGVTSMP--DYKP 243
Query: 148 DLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 205
              +  R  F  +   L       + D R     L  +L + P KR +A+  L HP+ 
Sbjct: 244 SFPKWARQDFSKVVPPL-------DEDGR---SLLSQMLHYDPNKRISAKAALAHPFF 291

>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 51/178 (28%), Positives = 75/178 (42%), Gaps = 25/178 (14%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRA----NKQFAEEIQTRQYRAPEVILRAGY-SFSVDMW 87
           KP+  L   +   K+ DFG A RA     + +  E+ T  YRAPE++L   Y S +VD+W
Sbjct: 132 KPQNLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIW 190
Query: 88  SFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHG 147
           S  C   E+ T   LF   S      + D L  +   +G  P ++   G  S    D   
Sbjct: 191 SLGCIFAEMVTRRALFPGDS------EIDQLFRIFRTLGT-PDEVVWPGVTSMP--DYKP 241
Query: 148 DLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 205
              +  R  F  +   L       + D R     L  +L + P KR +A+  L HP+ 
Sbjct: 242 SFPKWARQDFSKVVPPL-------DEDGR---SLLSQMLHYDPNKRISAKAALAHPFF 289

>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed With A Bisanilinopyrimidine Inhibitor Length = 302

Iteration: 1
 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 51/178 (28%), Positives = 75/178 (42%), Gaps = 25/178 (14%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRA----NKQFAEEIQTRQYRAPEVILRAGY-SFSVDMW 87
           KP+  L   +   K+ DFG A RA     + +  E+ T  YRAPE++L   Y S +VD+W
Sbjct: 133 KPQNLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIW 191
Query: 88  SFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHG 147
           S  C   E+ T   LF   S      + D L  +   +G  P ++   G  S    D   
Sbjct: 192 SLGCIFAEMVTRRALFPGDS------EIDQLFRIFRTLGT-PDEVVWPGVTSMP--DYKP 242
Query: 148 DLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 205
              +  R  F  +   L       + D R     L  +L + P KR +A+  L HP+ 
Sbjct: 243 SFPKWARQDFSKVVPPL-------DEDGR---SLLSQMLHYDPNKRISAKAALAHPFF 290

>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632 Length = 350

Iteration: 1
 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 26/67 (38%), Positives = 34/67 (50%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACT 92
           KPE  L       KV DFG A R   +      T +Y APE+IL  GY+ +VD W+    
Sbjct: 168 KPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVL 227
Query: 93  AFELATG 99
            +E+A G
Sbjct: 228 IYEMAAG 234

>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed With A 2-arylamino-4-cyclohexylmethyl-5-nitroso-6- aminopyrimidine Inhibitor Length = 302

Iteration: 1
 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 51/178 (28%), Positives = 75/178 (42%), Gaps = 25/178 (14%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRA----NKQFAEEIQTRQYRAPEVILRAGY-SFSVDMW 87
           KP+  L   +   K+ DFG A RA     + +  E+ T  YRAPE++L   Y S +VD+W
Sbjct: 133 KPQNLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIW 191
Query: 88  SFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHG 147
           S  C   E+ T   LF   S      + D L  +   +G  P ++   G  S    D   
Sbjct: 192 SLGCIFAEMVTRRALFPGDS------EIDQLFRIFRTLGT-PDEVVWPGVTSMP--DYKP 242
Query: 148 DLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 205
              +  R  F  +   L       + D R     L  +L + P KR +A+  L HP+ 
Sbjct: 243 SFPKWARQDFSKVVPPL-------DEDGR---SLLSQMLHYDPNKRISAKAALAHPFF 290

>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase Length = 350

Iteration: 1
 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 26/67 (38%), Positives = 34/67 (50%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACT 92
           KPE  L       KV DFG A R   +      T +Y APE+IL  GY+ +VD W+    
Sbjct: 168 KPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVL 227
Query: 93  AFELATG 99
            +E+A G
Sbjct: 228 IYEMAAG 234

>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B Length = 289

Iteration: 1
 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 51/178 (28%), Positives = 75/178 (42%), Gaps = 25/178 (14%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRA----NKQFAEEIQTRQYRAPEVILRAGY-SFSVDMW 87
           KP+  L   +   K+ DFG A RA     + +  E+ T  YRAPE++L   Y S +VD+W
Sbjct: 130 KPQNLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIW 188
Query: 88  SFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHG 147
           S  C   E+ T   LF   S      + D L  +   +G  P ++   G  S    D   
Sbjct: 189 SLGCIFAEMVTRRALFPGDS------EIDQLFRIFRTLGT-PDEVVWPGVTSMP--DYKP 239
Query: 148 DLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 205
              +  R  F  +   L       + D R     L  +L + P KR +A+  L HP+ 
Sbjct: 240 SFPKWARQDFSKVVPPL-------DEDGR---SLLSQMLHYDPNKRISAKAALAHPFF 287

>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With Atp Length = 302

Iteration: 1
 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 51/178 (28%), Positives = 75/178 (42%), Gaps = 25/178 (14%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRA----NKQFAEEIQTRQYRAPEVILRAGY-SFSVDMW 87
           KP+  L   +   K+ DFG A RA     + +  E+ T  YRAPE++L   Y S +VD+W
Sbjct: 133 KPQNLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIW 191
Query: 88  SFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHG 147
           S  C   E+ T   LF   S      + D L  +   +G  P ++   G  S    D   
Sbjct: 192 SLGCIFAEMVTRRALFPGDS------EIDQLFRIFRTLGT-PDEVVWPGVTSMP--DYKP 242
Query: 148 DLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 205
              +  R  F  +   L       + D R     L  +L + P KR +A+  L HP+ 
Sbjct: 243 SFPKWARQDFSKVVPPL-------DEDGR---SLLSQMLHYDPNKRISAKAALAHPFF 290

>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E Length = 298

Iteration: 1
 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 51/178 (28%), Positives = 75/178 (42%), Gaps = 25/178 (14%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRA----NKQFAEEIQTRQYRAPEVILRAGY-SFSVDMW 87
           KP+  L   +   K+ DFG A RA     + +  E+ T  YRAPE++L   Y S +VD+W
Sbjct: 130 KPQNLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIW 188
Query: 88  SFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHG 147
           S  C   E+ T   LF   S      + D L  +   +G  P ++   G  S    D   
Sbjct: 189 SLGCIFAEMVTRRALFPGDS------EIDQLFRIFRTLGT-PDEVVWPGVTSMP--DYKP 239
Query: 148 DLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 205
              +  R  F  +   L       + D R     L  +L + P KR +A+  L HP+ 
Sbjct: 240 SFPKWARQDFSKVVPPL-------DEDGR---SLLSQMLHYDPNKRISAKAALAHPFF 287

>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX WITH THE Inhibitor Meriolin 3 Length = 300

Iteration: 1
 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 51/178 (28%), Positives = 75/178 (42%), Gaps = 25/178 (14%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRA----NKQFAEEIQTRQYRAPEVILRAGY-SFSVDMW 87
           KP+  L   +   K+ DFG A RA     + +  E+ T  YRAPE++L   Y S +VD+W
Sbjct: 131 KPQNLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIW 189
Query: 88  SFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHG 147
           S  C   E+ T   LF   S      + D L  +   +G  P ++   G  S    D   
Sbjct: 190 SLGCIFAEMVTRRALFPGDS------EIDQLFRIFRTLGT-PDEVVWPGVTSMP--DYKP 240
Query: 148 DLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 205
              +  R  F  +   L       + D R     L  +L + P KR +A+  L HP+ 
Sbjct: 241 SFPKWARQDFSKVVPPL-------DEDGR---SLLSQMLHYDPNKRISAKAALAHPFF 288

>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With Y- 27632 Length = 350

Iteration: 1
 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 26/67 (38%), Positives = 34/67 (50%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACT 92
           KPE  L       KV DFG A R   +      T +Y APE+IL  GY+ +VD W+    
Sbjct: 168 KPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVL 227
Query: 93  AFELATG 99
            +E+A G
Sbjct: 228 IYEMAAG 234

>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A Length = 298

Iteration: 1
 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 51/178 (28%), Positives = 75/178 (42%), Gaps = 25/178 (14%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRA----NKQFAEEIQTRQYRAPEVILRAGY-SFSVDMW 87
           KP+  L   +   K+ DFG A RA     + +  E+ T  YRAPE++L   Y S +VD+W
Sbjct: 129 KPQNLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIW 187
Query: 88  SFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHG 147
           S  C   E+ T   LF   S      + D L  +   +G  P ++   G  S    D   
Sbjct: 188 SLGCIFAEMVTRRALFPGDS------EIDQLFRIFRTLGT-PDEVVWPGVTSMP--DYKP 238
Query: 148 DLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 205
              +  R  F  +   L       + D R     L  +L + P KR +A+  L HP+ 
Sbjct: 239 SFPKWARQDFSKVVPPL-------DEDGR---SLLSQMLHYDPNKRISAKAALAHPFF 286

>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic Length = 298

Iteration: 1
 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 51/178 (28%), Positives = 75/178 (42%), Gaps = 25/178 (14%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRA----NKQFAEEIQTRQYRAPEVILRAGY-SFSVDMW 87
           KP+  L   +   K+ DFG A RA     + +  E+ T  YRAPE++L   Y S +VD+W
Sbjct: 131 KPQNLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIW 189
Query: 88  SFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHG 147
           S  C   E+ T   LF   S      + D L  +   +G  P ++   G  S    D   
Sbjct: 190 SLGCIFAEMVTRRALFPGDS------EIDQLFRIFRTLGT-PDEVVWPGVTSMP--DYKP 240
Query: 148 DLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 205
              +  R  F  +   L       + D R     L  +L + P KR +A+  L HP+ 
Sbjct: 241 SFPKWARQDFSKVVPPL-------DEDGR---SLLSQMLHYDPNKRISAKAALAHPFF 288

>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With The Inhibitor Indirubin-5-Sulphonate Bound Length = 297

Iteration: 1
 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 51/178 (28%), Positives = 75/178 (42%), Gaps = 25/178 (14%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRA----NKQFAEEIQTRQYRAPEVILRAGY-SFSVDMW 87
           KP+  L   +   K+ DFG A RA     + +  E+ T  YRAPE++L   Y S +VD+W
Sbjct: 130 KPQNLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIW 188
Query: 88  SFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHG 147
           S  C   E+ T   LF   S      + D L  +   +G  P ++   G  S    D   
Sbjct: 189 SLGCIFAEMVTRRALFPGDS------EIDQLFRIFRTLGT-PDEVVWPGVTSMP--DYKP 239
Query: 148 DLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 205
              +  R  F  +   L       + D R     L  +L + P KR +A+  L HP+ 
Sbjct: 240 SFPKWARQDFSKVVPPL-------DEDGR---SLLSQMLHYDPNKRISAKAALAHPFF 287

>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v- H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor Length = 302

Iteration: 1
 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 51/178 (28%), Positives = 75/178 (42%), Gaps = 25/178 (14%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRA----NKQFAEEIQTRQYRAPEVILRAGY-SFSVDMW 87
           KP+  L   +   K+ DFG A RA     + +  E+ T  YRAPE++L   Y S +VD+W
Sbjct: 133 KPQNLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIW 191
Query: 88  SFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHG 147
           S  C   E+ T   LF   S      + D L  +   +G  P ++   G  S    D   
Sbjct: 192 SLGCIFAEMVTRRALFPGDS------EIDQLFRIFRTLGT-PDEVVWPGVTSMP--DYKP 242
Query: 148 DLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 205
              +  R  F  +   L       + D R     L  +L + P KR +A+  L HP+ 
Sbjct: 243 SFPKWARQDFSKVVPPL-------DEDGR---SLLSQMLHYDPNKRISAKAALAHPFF 290

>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM IONS Length = 296

Iteration: 1
 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 51/178 (28%), Positives = 75/178 (42%), Gaps = 25/178 (14%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRA----NKQFAEEIQTRQYRAPEVILRAGY-SFSVDMW 87
           KP+  L   +   K+ DFG A RA     + +  E+ T  YRAPE++L   Y S +VD+W
Sbjct: 129 KPQNLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIW 187
Query: 88  SFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHG 147
           S  C   E+ T   LF   S      + D L  +   +G  P ++   G  S    D   
Sbjct: 188 SLGCIFAEMVTRRALFPGDS------EIDQLFRIFRTLGT-PDEVVWPGVTSMP--DYKP 238
Query: 148 DLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 205
              +  R  F  +   L       + D R     L  +L + P KR +A+  L HP+ 
Sbjct: 239 SFPKWARQDFSKVVPPL-------DEDGR---SLLSQMLHYDPNKRISAKAALAHPFF 286

>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex Length = 299

Iteration: 1
 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 51/178 (28%), Positives = 75/178 (42%), Gaps = 25/178 (14%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRA----NKQFAEEIQTRQYRAPEVILRAGY-SFSVDMW 87
           KP+  L   +   K+ DFG A RA     + +  E+ T  YRAPE++L   Y S +VD+W
Sbjct: 130 KPQNLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIW 188
Query: 88  SFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHG 147
           S  C   E+ T   LF   S      + D L  +   +G  P ++   G  S    D   
Sbjct: 189 SLGCIFAEMVTRRALFPGDS------EIDQLFRIFRTLGT-PDEVVWPGVTSMP--DYKP 239
Query: 148 DLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 205
              +  R  F  +   L       + D R     L  +L + P KR +A+  L HP+ 
Sbjct: 240 SFPKWARQDFSKVVPPL-------DEDGR---SLLSQMLHYDPNKRISAKAALAHPFF 287

>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182 Length = 353

Iteration: 1
 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 56/200 (28%), Positives = 85/200 (42%), Gaps = 38/200 (19%)
Query: 33  KPERCLDGIDMRCKVVDFG-----------NACRANKQ--FAEEIQTRQYRAPEVIL-RA 78
           KP   L   +   KV DFG           N+    +Q    E + TR YRAPEV+L  A
Sbjct: 139 KPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATRWYRAPEVMLTSA 198
Query: 79  GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKI----AI 134
            YS ++D+WS  C   EL     +F    G+ +      L L+  +IG  P        I
Sbjct: 199 KYSRAMDVWSCGCILAELFLRRPIFP---GRDY---RHQLLLIFGIIGT-PHSDNDLRCI 251
Query: 135 GGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRP 194
              ++++Y         I+ L  +    L   +  F   + +   + L  +L F P KR 
Sbjct: 252 ESPRAREY---------IKSLPMYPAAPL---EKMFPRVNPKGI-DLLQRMLVFDPAKRI 298
Query: 195 TAQQCLQHPWLSLRNSTRDE 214
           TA++ L+HP+L   +   DE
Sbjct: 299 TAKEALEHPYLQTYHDPNDE 318

>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 51/178 (28%), Positives = 75/178 (42%), Gaps = 25/178 (14%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRA----NKQFAEEIQTRQYRAPEVILRAGY-SFSVDMW 87
           KP+  L   +   K+ DFG A RA     + +  E+ T  YRAPE++L   Y S +VD+W
Sbjct: 133 KPQNLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIW 191
Query: 88  SFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHG 147
           S  C   E+ T   LF   S      + D L  +   +G  P ++   G  S    D   
Sbjct: 192 SLGCIFAEMVTRRALFPGDS------EIDQLFRIFRTLGT-PDEVVWPGVTSMP--DYKP 242
Query: 148 DLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 205
              +  R  F  +   L       + D R     L  +L + P KR +A+  L HP+ 
Sbjct: 243 SFPKWARQDFSKVVPPL-------DEDGR---SLLSQMLHYDPNKRISAKAALAHPFF 290

>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 301

Iteration: 1
 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 51/178 (28%), Positives = 75/178 (42%), Gaps = 25/178 (14%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRA----NKQFAEEIQTRQYRAPEVILRAGY-SFSVDMW 87
           KP+  L   +   K+ DFG A RA     + +  E+ T  YRAPE++L   Y S +VD+W
Sbjct: 132 KPQNLLINTEGAIKLADFGLA-RAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIW 190
Query: 88  SFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHG 147
           S  C   E+ T   LF   S      + D L  +   +G  P ++   G  S    D   
Sbjct: 191 SLGCIFAEMVTRRALFPGDS------EIDQLFRIFRTLGT-PDEVVWPGVTSMP--DYKP 241
Query: 148 DLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 205
              +  R  F  +   L       + D R     L  +L + P KR +A+  L HP+ 
Sbjct: 242 SFPKWARQDFSKVVPPL-------DEDGR---SLLSQMLHYDPNKRISAKAALAHPFF 289

>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1, Cgd3_920 Length = 486

Iteration: 1
 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 53/204 (25%), Positives = 83/204 (40%), Gaps = 53/204 (25%)
Query: 33  KPERCL---DGIDMRCKVVDFG-NAC-RANKQFAEEIQTRQYRAPEVILRAGYSFSVDMW 87
           KPE  L      D   K++DFG + C + N +  + I T  Y APEV LR  Y    D+W
Sbjct: 148 KPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEV-LRGTYDEKCDVW 206
Query: 88  SFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHG 147
           S     + L +G   F  K                                     + + 
Sbjct: 207 SAGVILYILLSGTPPFYGK-------------------------------------NEYD 229
Query: 148 DLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSL 207
            LKR+   K ++ D   + ++R    DA++    +  +L F P  R TA QCL+HPW+  
Sbjct: 230 ILKRVETGK-YAFD---LPQWRTISDDAKDL---IRKMLTFHPSLRITATQCLEHPWIQK 282
Query: 208 RNSTRDETKNKSNVEKVDVGMSKL 231
            +S   ET   S++  ++  M+ +
Sbjct: 283 YSS---ETPTISDLPSLESAMTNI 303

>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With Inhibitor Jnj- 7706621 Length = 351

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/67 (38%), Positives = 34/67 (50%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACT 92
           KPE  L       KV DFG A R   +      T +Y APE+IL  GY+ +VD W+    
Sbjct: 169 KPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVL 228
Query: 93  AFELATG 99
            +E+A G
Sbjct: 229 IYEMAAG 235

>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3 Length = 353

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 56/200 (28%), Positives = 85/200 (42%), Gaps = 38/200 (19%)
Query: 33  KPERCLDGIDMRCKVVDFG-----------NACRANKQ--FAEEIQTRQYRAPEVIL-RA 78
           KP   L   +   KV DFG           N+    +Q    E + TR YRAPEV+L  A
Sbjct: 139 KPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRWYRAPEVMLTSA 198
Query: 79  GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKI----AI 134
            YS ++D+WS  C   EL     +F    G+ +      L L+  +IG  P        I
Sbjct: 199 KYSRAMDVWSCGCILAELFLRRPIFP---GRDY---RHQLLLIFGIIGT-PHSDNDLRCI 251
Query: 135 GGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRP 194
              ++++Y         I+ L  +    L   +  F   + +   + L  +L F P KR 
Sbjct: 252 ESPRAREY---------IKSLPMYPAAPL---EKMFPRVNPKGI-DLLQRMLVFDPAKRI 298
Query: 195 TAQQCLQHPWLSLRNSTRDE 214
           TA++ L+HP+L   +   DE
Sbjct: 299 TAKEALEHPYLQTYHDPNDE 318

>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate Ligand Complex Length = 288

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/185 (27%), Positives = 77/185 (41%), Gaps = 31/185 (16%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRA----NKQFAEEIQTRQYRAPEVILRA-GYSFSVDMW 87
           KP+  L   +   K+ DFG A RA     +++  E+ T  YRAP+V++ +  YS ++D+W
Sbjct: 127 KPQNLLINREGELKIADFGLA-RAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYSTTIDIW 185
Query: 88  SFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDY---FD 144
           S  C   E+  G  LF   S      + D L  +  ++G    K      +   Y   F 
Sbjct: 186 SVGCIFAEMVNGTPLFPGVS------EADQLMRIFRILGTPNSKNWPNVTELPKYDPNFT 239
Query: 145 RHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPW 204
            +  L     LK   LD   +D               L  +L   P +R TA+Q L+H +
Sbjct: 240 VYEPLPWESFLK--GLDESGID--------------LLSKMLKLDPNQRITAKQALEHAY 283
Query: 205 LSLRN 209
               N
Sbjct: 284 FKENN 288

>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb Length = 350

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/67 (37%), Positives = 34/67 (50%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACT 92
           KPE  +       KV DFG A R   +      T +Y APE+IL  GY+ +VD W+    
Sbjct: 168 KPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVL 227
Query: 93  AFELATG 99
            +E+A G
Sbjct: 228 IYEMAAG 234

>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And Regulatory (Ri{alpha}) Subunits Of Pka Length = 350

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/67 (37%), Positives = 34/67 (50%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACT 92
           KPE  L       +V DFG A R   +      T +Y APE+IL  GY+ +VD W+    
Sbjct: 168 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXLAGTPEYLAPEIILSKGYNKAVDWWALGVL 227
Query: 93  AFELATG 99
            +E+A G
Sbjct: 228 IYEMAAG 234

>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein Kinase Catalytic Subunit Length = 350

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/67 (37%), Positives = 34/67 (50%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACT 92
           KPE  L       +V DFG A R   +      T +Y APE+IL  GY+ +VD W+    
Sbjct: 168 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXLXGTPEYLAPEIILSKGYNKAVDWWALGVL 227
Query: 93  AFELATG 99
            +E+A G
Sbjct: 228 IYEMAAG 234

>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5 Length = 288

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/185 (27%), Positives = 77/185 (41%), Gaps = 31/185 (16%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRA----NKQFAEEIQTRQYRAPEVILRA-GYSFSVDMW 87
           KP+  L   +   K+ DFG A RA     +++  E+ T  YRAP+V++ +  YS ++D+W
Sbjct: 127 KPQNLLINREGELKIADFGLA-RAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYSTTIDIW 185
Query: 88  SFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDY---FD 144
           S  C   E+  G  LF   S      + D L  +  ++G    K      +   Y   F 
Sbjct: 186 SVGCIFAEMVNGAPLFPGVS------EADQLMRIFRILGTPNSKNWPNVTELPKYDPNFT 239
Query: 145 RHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPW 204
            +  L     LK   LD   +D               L  +L   P +R TA+Q L+H +
Sbjct: 240 VYEPLPWESFLK--GLDESGID--------------LLSKMLKLDPNQRITAKQALEHAY 283
Query: 205 LSLRN 209
               N
Sbjct: 284 FKENN 288

>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein Kinase A (Pka) Length = 350

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/67 (37%), Positives = 34/67 (50%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACT 92
           KPE  +       KV DFG A R   +      T +Y APE+IL  GY+ +VD W+    
Sbjct: 168 KPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVL 227
Query: 93  AFELATG 99
            +E+A G
Sbjct: 228 IYEMAAG 234

>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a, L173m, Q181k) With Compound 18 Length = 351

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/67 (37%), Positives = 34/67 (50%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACT 92
           KPE  +       KV DFG A R   +      T +Y APE+IL  GY+ +VD W+    
Sbjct: 169 KPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVL 228
Query: 93  AFELATG 99
            +E+A G
Sbjct: 229 IYEMAAG 235

>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4- Chlorophenyl)-1-(7h-Pyrrolo(2, 3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine Length = 351

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/67 (37%), Positives = 34/67 (50%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACT 92
           KPE  +       KV DFG A R   +      T +Y APE+IL  GY+ +VD W+    
Sbjct: 169 KPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVL 228
Query: 93  AFELATG 99
            +E+A G
Sbjct: 229 IYEMAAG 235

>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h- Purin-6-yl)-benzyl)-amine Length = 351

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/67 (37%), Positives = 34/67 (50%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACT 92
           KPE  +       KV DFG A R   +      T +Y APE+IL  GY+ +VD W+    
Sbjct: 169 KPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVL 228
Query: 93  AFELATG 99
            +E+A G
Sbjct: 229 IYEMAAG 235

>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 351

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/67 (37%), Positives = 34/67 (50%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACT 92
           KPE  +       KV DFG A R   +      T +Y APE+IL  GY+ +VD W+    
Sbjct: 169 KPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVL 228
Query: 93  AFELATG 99
            +E+A G
Sbjct: 229 IYEMAAG 235

>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain Length = 331

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/184 (25%), Positives = 79/184 (42%), Gaps = 31/184 (16%)
Query: 33  KPERCLDGIDMRCKVVDFGNA---CRANKQFAEEIQTRQYRAPEVIL-RAGYSFSVDMWS 88
           KPE  L       K+ DFG A       + + +E+ TR YRAPE+++    Y  +VD+W+
Sbjct: 151 KPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGDVKYGKAVDVWA 210
Query: 89  FACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKM-PRKIAIGGAQSKDYFDRHG 147
             C   E+  G+ LF   S      D D L  +M  +G + PR         ++ F+++ 
Sbjct: 211 IGCLVTEMFMGEPLFPGDS------DIDQLYHIMMCLGNLIPR--------HQELFNKNP 256
Query: 148 DLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPL----LDFTPEKRPTAQQCLQHP 203
               +R  +    + L        E    + +E ++ L    L   P+KRP   + L H 
Sbjct: 257 VFAGVRLPEIKEREPL--------ERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHD 308
Query: 204 WLSL 207
           +  +
Sbjct: 309 FFQM 312

>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide Substrate Complex: Kinase Substrate Recognition Length = 277

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/181 (27%), Positives = 66/181 (36%), Gaps = 52/181 (28%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRAN--KQFAEEIQTRQYRAPEVIL------RAGYSFSV 84
           KPE  L   DM  K+ DFG +C+ +  ++  E   T  Y APE+I         GY   V
Sbjct: 138 KPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEV 197
Query: 85  DMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFD 144
           DMWS     + L  G   F  +             LM+ +I  M      G  +  DY D
Sbjct: 198 DMWSTGVIMYTLLAGSPPFWHRKQM----------LMLRMI--MSGNYQFGSPEWDDYSD 245
Query: 145 RHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPW 204
              DL          + R LV                        P+KR TA++ L HP+
Sbjct: 246 TVKDL----------VSRFLV----------------------VQPQKRYTAEEALAHPF 273
Query: 205 L 205
Sbjct: 274 F 274

>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia Length = 329

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 50/166 (30%), Positives = 76/166 (45%), Gaps = 24/166 (14%)
Query: 46  KVVDFGNACRA----NKQFAEEIQTRQYRAPEVILRA-GYSFSVDMWSFACTAFELATGD 100
           K+ DFG A RA     +QF  EI T  YR PE++L +  YS SVD+WS AC   E+    
Sbjct: 177 KIGDFGLA-RAFGIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKT 235
Query: 101 MLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSL 160
            LF   S      + D L  + E++G +P      G  +   +      +   + +  +L
Sbjct: 236 PLFPGDS------EIDQLFKIFEVLG-LPDDTTWPGVTALPDWK-----QSFPKFRGKTL 283
Query: 161 DRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLS 206
            R+L            E  + L  +L+  P KR +A+  L+HP+ S
Sbjct: 284 KRVL------GALLDDEGLDLLTAMLEMDPVKRISAKNALEHPYFS 323

>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase, Kinase: An Active Protein Kinase Complexed With Nucleotide, Substrate-Analogue And Product Length = 298

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/181 (27%), Positives = 66/181 (36%), Gaps = 52/181 (28%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRAN--KQFAEEIQTRQYRAPEVIL------RAGYSFSV 84
           KPE  L   DM  K+ DFG +C+ +  ++  E   T  Y APE+I         GY   V
Sbjct: 151 KPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEV 210
Query: 85  DMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFD 144
           DMWS     + L  G   F  +             LM+ +I  M      G  +  DY D
Sbjct: 211 DMWSTGVIMYTLLAGSPPFWHRKQM----------LMLRMI--MSGNYQFGSPEWDDYSD 258
Query: 145 RHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPW 204
              DL          + R LV                        P+KR TA++ L HP+
Sbjct: 259 TVKDL----------VSRFLV----------------------VQPQKRYTAEEALAHPF 286
Query: 205 L 205
Sbjct: 287 F 287

>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 25/67 (37%), Positives = 34/67 (50%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACT 92
           KPE  +       KV DFG A R   +      T +Y APE+IL  GY+ +VD W+    
Sbjct: 168 KPENLMIDQQGYIKVTDFGLAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVL 227
Query: 93  AFELATG 99
            +E+A G
Sbjct: 228 IYEMAAG 234

>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7 Length = 353

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 56/200 (28%), Positives = 85/200 (42%), Gaps = 38/200 (19%)
Query: 33  KPERCLDGIDMRCKVVDFG-----------NACRANKQ--FAEEIQTRQYRAPEVIL-RA 78
           KP   L   +   KV DFG           N+    +Q    E + TR YRAPEV+L  A
Sbjct: 139 KPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSA 198
Query: 79  GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKI----AI 134
            YS ++D+WS  C   EL     +F    G+ +      L L+  +IG  P        I
Sbjct: 199 KYSRAMDVWSCGCILAELFLRRPIFP---GRDY---RHQLLLIFGIIGT-PHSDNDLRCI 251
Query: 135 GGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRP 194
              ++++Y         I+ L  +    L   +  F   + +   + L  +L F P KR 
Sbjct: 252 ESPRAREY---------IKSLPMYPAAPL---EKMFPRVNPKGI-DLLQRMLVFDPAKRI 298
Query: 195 TAQQCLQHPWLSLRNSTRDE 214
           TA++ L+HP+L   +   DE
Sbjct: 299 TAKEALEHPYLQTYHDPNDE 318

>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor Complex Length = 371

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 25/67 (37%), Positives = 34/67 (50%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACT 92
           KPE  L       +V DFG A R   +      T +Y APE+IL  GY+ +VD W+    
Sbjct: 189 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVL 248
Query: 93  AFELATG 99
            +E+A G
Sbjct: 249 IYEMAAG 255

>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent Protein Kinase With Unphosphorylated Turn Motif Length = 371

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 25/67 (37%), Positives = 34/67 (50%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACT 92
           KPE  L       +V DFG A R   +      T +Y APE+IL  GY+ +VD W+    
Sbjct: 189 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVL 248
Query: 93  AFELATG 99
            +E+A G
Sbjct: 249 IYEMAAG 255

>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With Azepane Derivative 8 Length = 350

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 25/67 (37%), Positives = 34/67 (50%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACT 92
           KPE  L       +V DFG A R   +      T +Y APE+IL  GY+ +VD W+    
Sbjct: 168 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVL 227
Query: 93  AFELATG 99
            +E+A G
Sbjct: 228 IYEMAAG 234

>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With A- 443654 Length = 351

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 25/67 (37%), Positives = 34/67 (50%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACT 92
           KPE  L       +V DFG A R   +      T +Y APE+IL  GY+ +VD W+    
Sbjct: 169 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVL 228
Query: 93  AFELATG 99
            +E+A G
Sbjct: 229 IYEMAAG 235

>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 25/67 (37%), Positives = 34/67 (50%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACT 92
           KPE  L       +V DFG A R   +      T +Y APE+IL  GY+ +VD W+    
Sbjct: 168 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVL 227
Query: 93  AFELATG 99
            +E+A G
Sbjct: 228 IYEMAAG 234

>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2 Length = 343

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 25/67 (37%), Positives = 34/67 (50%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACT 92
           KPE  L       +V DFG A R   +      T +Y APE+IL  GY+ +VD W+    
Sbjct: 161 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVL 220
Query: 93  AFELATG 99
            +E+A G
Sbjct: 221 IYEMAAG 227

>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With Pki-5-24 Length = 350

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 25/67 (37%), Positives = 34/67 (50%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACT 92
           KPE  L       +V DFG A R   +      T +Y APE+IL  GY+ +VD W+    
Sbjct: 168 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVL 227
Query: 93  AFELATG 99
            +E+A G
Sbjct: 228 IYEMAAG 234

>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl)amide Length = 351

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 25/67 (37%), Positives = 34/67 (50%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACT 92
           KPE  L       +V DFG A R   +      T +Y APE+IL  GY+ +VD W+    
Sbjct: 169 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVL 228
Query: 93  AFELATG 99
            +E+A G
Sbjct: 229 IYEMAAG 235

>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit Calpha 2 Length = 343

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 25/67 (37%), Positives = 34/67 (50%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACT 92
           KPE  L       +V DFG A R   +      T +Y APE+IL  GY+ +VD W+    
Sbjct: 161 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVL 220
Query: 93  AFELATG 99
            +E+A G
Sbjct: 221 IYEMAAG 227

>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors Length = 336

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 25/67 (37%), Positives = 34/67 (50%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACT 92
           KPE  L       +V DFG A R   +      T +Y APE+IL  GY+ +VD W+    
Sbjct: 154 KPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPEYLAPEIILSKGYNKAVDWWALGVL 213
Query: 93  AFELATG 99
            +E+A G
Sbjct: 214 IYEMAAG 220

>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077) Length = 350

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 25/67 (37%), Positives = 34/67 (50%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACT 92
           KPE  L       +V DFG A R   +      T +Y APE+IL  GY+ +VD W+    
Sbjct: 168 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVL 227
Query: 93  AFELATG 99
            +E+A G
Sbjct: 228 IYEMAAG 234

>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-1039 Length = 351

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 25/67 (37%), Positives = 34/67 (50%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACT 92
           KPE  L       +V DFG A R   +      T +Y APE+IL  GY+ +VD W+    
Sbjct: 169 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVL 228
Query: 93  AFELATG 99
            +E+A G
Sbjct: 229 IYEMAAG 235

>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit Of Camp- Dependent Protein Kinase Reveal Open And Closed Conformations Length = 350

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 25/67 (37%), Positives = 34/67 (50%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACT 92
           KPE  L       +V DFG A R   +      T +Y APE+IL  GY+ +VD W+    
Sbjct: 168 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVL 227
Query: 93  AFELATG 99
            +E+A G
Sbjct: 228 IYEMAAG 234

>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With Staurosporine Length = 350

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 25/67 (37%), Positives = 34/67 (50%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACT 92
           KPE  L       +V DFG A R   +      T +Y APE+IL  GY+ +VD W+    
Sbjct: 168 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVL 227
Query: 93  AFELATG 99
            +E+A G
Sbjct: 228 IYEMAAG 234

>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol Length = 351

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 25/67 (37%), Positives = 34/67 (50%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACT 92
           KPE  L       +V DFG A R   +      T +Y APE+IL  GY+ +VD W+    
Sbjct: 169 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVL 228
Query: 93  AFELATG 99
            +E+A G
Sbjct: 229 IYEMAAG 235

>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of Camp-Dependent Protein Kinase And An Inhibitor Peptide Displays An Open Conformation Length = 350

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 25/67 (37%), Positives = 34/67 (50%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACT 92
           KPE  L       +V DFG A R   +      T +Y APE+IL  GY+ +VD W+    
Sbjct: 168 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVL 227
Query: 93  AFELATG 99
            +E+A G
Sbjct: 228 IYEMAAG 234

>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of Camp-Dependent Protein Kinase Length = 345

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 25/67 (37%), Positives = 34/67 (50%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACT 92
           KPE  L       +V DFG A R   +      T +Y APE+IL  GY+ +VD W+    
Sbjct: 163 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVL 222
Query: 93  AFELATG 99
            +E+A G
Sbjct: 223 IYEMAAG 229

>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-670 Length = 351

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 25/67 (37%), Positives = 34/67 (50%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACT 92
           KPE  L       +V DFG A R   +      T +Y APE+IL  GY+ +VD W+    
Sbjct: 169 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVL 228
Query: 93  AFELATG 99
            +E+A G
Sbjct: 229 IYEMAAG 235

>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit (E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24) Isoelectric Variant Ca) And Mn2+ Adenylyl Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c Length = 350

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 25/67 (37%), Positives = 34/67 (50%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACT 92
           KPE  L       +V DFG A R   +      T +Y APE+IL  GY+ +VD W+    
Sbjct: 168 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVL 227
Query: 93  AFELATG 99
            +E+A G
Sbjct: 228 IYEMAAG 234

>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin Length = 305

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
Query: 33  KPERCLDGIDMRCKVVDFG---NACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSF 89
           KPE  L   +   K+ DFG    +    K+      T +Y APEV+ R G++ S D WSF
Sbjct: 154 KPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSF 213
Query: 90  ACTAFELATGDMLFAPK 106
               FE+ TG + F  K
Sbjct: 214 GVLMFEMLTGTLPFQGK 230

>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex With Flavonoid Glycoside Sl0101 Length = 304

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
Query: 33  KPERCLDGIDMRCKVVDFG---NACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSF 89
           KPE  L   +   K+ DFG    +    K+      T +Y APEV+ R G++ S D WSF
Sbjct: 153 KPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSF 212
Query: 90  ACTAFELATGDMLFAPK 106
               FE+ TG + F  K
Sbjct: 213 GVLMFEMLTGTLPFQGK 229

>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With H89 Protein Kinase Inhibitor N-[2- (4-Bromocinnamylamino)ethyl]-5-Isoquinoline Length = 350

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 25/67 (37%), Positives = 34/67 (50%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACT 92
           KPE  L       +V DFG A R   +      T +Y APE+IL  GY+ +VD W+    
Sbjct: 168 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVL 227
Query: 93  AFELATG 99
            +E+A G
Sbjct: 228 IYEMAAG 234

>pdb|2F7E|E Chain E, Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6- Yl-Pyridin-3-Yloxymethyl-Etylamine Length = 351

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 25/67 (37%), Positives = 34/67 (50%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACT 92
           KPE  L       +V DFG A R   +      T +Y APE+IL  GY+ +VD W+    
Sbjct: 169 KPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPEYLAPEIILSKGYNKAVDWWALGVL 228
Query: 93  AFELATG 99
            +E+A G
Sbjct: 229 IYEMAAG 235

>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 25/67 (37%), Positives = 34/67 (50%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACT 92
           KPE  L       +V DFG A R   +      T +Y APE+IL  GY+ +VD W+    
Sbjct: 168 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVL 227
Query: 93  AFELATG 99
            +E+A G
Sbjct: 228 IYEMAAG 234

>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 25/67 (37%), Positives = 34/67 (50%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACT 92
           KPE  L       +V DFG A R   +      T +Y APE+IL  GY+ +VD W+    
Sbjct: 168 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVL 227
Query: 93  AFELATG 99
            +E+A G
Sbjct: 228 IYEMAAG 234

>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp- Dependent Protein Kinase Complexed With A Substrate Peptide, Adp And Detergent Length = 350

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 25/67 (37%), Positives = 34/67 (50%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACT 92
           KPE  L       +V DFG A R   +      T +Y APE+IL  GY+ +VD W+    
Sbjct: 168 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVL 227
Query: 93  AFELATG 99
            +E+A G
Sbjct: 228 IYEMAAG 234

>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With A Peptide Inhibitor And Detergent Length = 350

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 25/67 (37%), Positives = 34/67 (50%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACT 92
           KPE  L       +V DFG A R   +      T +Y APE+IL  GY+ +VD W+    
Sbjct: 168 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVL 227
Query: 93  AFELATG 99
            +E+A G
Sbjct: 228 IYEMAAG 234

>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory Subunit Of Protein Kinase A That Represents The Inhibited State Length = 350

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 25/67 (37%), Positives = 34/67 (50%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACT 92
           KPE  L       +V DFG A R   +      T +Y APE+IL  GY+ +VD W+    
Sbjct: 168 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVL 227
Query: 93  AFELATG 99
            +E+A G
Sbjct: 228 IYEMAAG 234

>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of Camp-Dependent Protein Kinase And Adenosine Further Defines Conformational Flexibility Length = 350

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 25/67 (37%), Positives = 34/67 (50%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACT 92
           KPE  L       +V DFG A R   +      T +Y APE+IL  GY+ +VD W+    
Sbjct: 168 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVL 227
Query: 93  AFELATG 99
            +E+A G
Sbjct: 228 IYEMAAG 234

>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To Hydroxyfasudil Length = 351

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 25/67 (37%), Positives = 34/67 (50%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACT 92
           KPE  L       +V DFG A R   +      T +Y APE+IL  GY+ +VD W+    
Sbjct: 169 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVL 228
Query: 93  AFELATG 99
            +E+A G
Sbjct: 229 IYEMAAG 235

>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 25/67 (37%), Positives = 34/67 (50%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACT 92
           KPE  L       +V DFG A R   +      T +Y APE+IL  GY+ +VD W+    
Sbjct: 168 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVL 227
Query: 93  AFELATG 99
            +E+A G
Sbjct: 228 IYEMAAG 234

>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With The Peptide Inhibitor Pki(5-24) And Adenosine Length = 350

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 25/67 (37%), Positives = 34/67 (50%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACT 92
           KPE  L       +V DFG A R   +      T +Y APE+IL  GY+ +VD W+    
Sbjct: 168 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVL 227
Query: 93  AFELATG 99
            +E+A G
Sbjct: 228 IYEMAAG 234

>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And Potent Inhibitors For Akt: Synthesis And Sar Studies Length = 337

Iteration: 1
 Score = 48.5 bits (114), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 25/67 (37%), Positives = 34/67 (50%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACT 92
           KPE  L       +V DFG A R   +      T +Y APE+IL  GY+ +VD W+    
Sbjct: 155 KPENLLIDEQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVL 214
Query: 93  AFELATG 99
            +E+A G
Sbjct: 215 IYEMAAG 221

>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit Of Camp- Dependent Protein Kinase In Complex With Sp20 And Amp-Pnp Length = 350

Iteration: 1
 Score = 48.1 bits (113), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 25/67 (37%), Positives = 34/67 (50%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACT 92
           KPE  L       +V DFG A R   +      T +Y APE+IL  GY+ +VD W+    
Sbjct: 168 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVL 227
Query: 93  AFELATG 99
            +E+A G
Sbjct: 228 IYEMAAG 234

>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex Length = 292

Iteration: 1
 Score = 48.1 bits (113), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 49/179 (27%), Positives = 75/179 (41%), Gaps = 24/179 (13%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRA----NKQFAEEIQTRQYRAPEVILRAG-YSFSVDMW 87
           KP+  L   +   K+ DFG A RA     + ++ E+ T  YR P+V+  A  YS S+DMW
Sbjct: 128 KPQNLLINRNGELKLADFGLA-RAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMW 186
Query: 88  SFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHG 147
           S  C   ELA       P +     + +D L  +  L+G    +      +  DY     
Sbjct: 187 SAGCIFAELANAARPLFPGN-----DVDDQLKRIFRLLGTPTEEQWPSMTKLPDY----- 236
Query: 148 DLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLS 206
                +    +     LV+         R   + L  LL   P +R +A++ LQHP+ S
Sbjct: 237 -----KPYPMYPATTSLVNVVPKLNATGR---DLLQNLLKCNPVQRISAEEALQHPYFS 287

>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N- Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 Length = 325

Iteration: 1
 Score = 48.1 bits (113), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
Query: 33  KPERCLDGIDMRCKVVDFG---NACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSF 89
           KPE  L   +   K+ DFG    +    K+      T +Y APEV+ R G++ S D WSF
Sbjct: 153 KPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSF 212
Query: 90  ACTAFELATGDMLFAPK 106
               FE+ TG + F  K
Sbjct: 213 GVLMFEMLTGTLPFQGK 229

>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300 Length = 280

Iteration: 1
 Score = 48.1 bits (113), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 48/192 (25%), Positives = 73/192 (38%), Gaps = 49/192 (25%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEI-QTRQYRAPEVILRAGYSFSVDMWSFAC 91
           KPE  L G     K+ DFG +  A      E+  T  Y  PE+I    +   VD+WS   
Sbjct: 135 KPENLLLGSAGELKIADFGWSVHAPSSRRTELCGTLDYLPPEMIEGRMHDEKVDLWSLGV 194
Query: 92  TAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKR 151
             +E                            L+GK P        ++  Y + +   KR
Sbjct: 195 LCYEF---------------------------LVGKPP-------FEANTYQETY---KR 217
Query: 152 IRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNST 211
           I R++F   D        F    AR+    +  LL   P +RP  ++ L+HPW++  +S 
Sbjct: 218 ISRVEFTFPD--------FVTEGARDL---ISRLLKHNPSQRPMLREVLEHPWITANSSK 266
Query: 212 RDETKNKSNVEK 223
               +NK +  K
Sbjct: 267 PSNCQNKESASK 278

>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent Protein Kinase With Unphosphorylated Activation Loop Length = 371

Iteration: 1
 Score = 48.1 bits (113), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 25/67 (37%), Positives = 33/67 (49%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACT 92
           KPE  L       +V DFG A R          T +Y APE+IL  GY+ +VD W+    
Sbjct: 189 KPENLLIDQQGYIQVTDFGFAKRVKGATWTLCGTPEYLAPEIILSKGYNKAVDWWALGVL 248
Query: 93  AFELATG 99
            +E+A G
Sbjct: 249 IYEMAAG 255

>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp Length = 350

Iteration: 1
 Score = 47.8 bits (112), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 24/67 (35%), Positives = 34/67 (50%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACT 92
           KPE  +       +V DFG A R   +      T +Y APE+IL  GY+ +VD W+    
Sbjct: 168 KPENLMIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVL 227
Query: 93  AFELATG 99
            +E+A G
Sbjct: 228 IYEMAAG 234

>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium Parvum Calcium Dependent Protein Kinase In Complex With 3- Mb-Pp1 Length = 287

Iteration: 1
 Score = 47.8 bits (112), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 45/171 (26%), Positives = 69/171 (40%), Gaps = 47/171 (27%)
Query: 42  DMRCKVVDFG-NAC-RANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATG 99
           D   K++DFG + C + N +  + I T  Y APEV LR  Y    D+WS     + L +G
Sbjct: 160 DCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEV-LRGTYDEKCDVWSAGVILYILLSG 218
Query: 100 DMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWS 159
              F  K                                     + +  LKR+   K+ +
Sbjct: 219 TPPFYGK-------------------------------------NEYDILKRVETGKY-A 240
Query: 160 LDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNS 210
            D   + ++R    DA+   + +  +L F P  R TA QCL+HPW+   +S
Sbjct: 241 FD---LPQWRTISDDAK---DLIRKMLTFHPSLRITATQCLEHPWIQKYSS 285

>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent Protein Kinase Cgd3_920 From Cryptosporidium Parvum Length = 286

Iteration: 1
 Score = 47.8 bits (112), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 45/171 (26%), Positives = 69/171 (40%), Gaps = 47/171 (27%)
Query: 42  DMRCKVVDFG-NAC-RANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATG 99
           D   K++DFG + C + N +  + I T  Y APEV LR  Y    D+WS     + L +G
Sbjct: 160 DCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEV-LRGTYDEKCDVWSAGVILYILLSG 218
Query: 100 DMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWS 159
              F  K                                     + +  LKR+   K+ +
Sbjct: 219 TPPFYGK-------------------------------------NEYDILKRVETGKY-A 240
Query: 160 LDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNS 210
            D   + ++R    DA+   + +  +L F P  R TA QCL+HPW+   +S
Sbjct: 241 FD---LPQWRTISDDAK---DLIRKMLTFHPSLRITATQCLEHPWIQKYSS 285

>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii, 25.M01780 Or Tgme49_007820 Length = 458

Iteration: 1
 Score = 47.8 bits (112), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 49/186 (26%), Positives = 76/186 (40%), Gaps = 37/186 (19%)
Query: 46  KVVDFGNACRANKQFAEEIQTRQYRAPEVI-LRAGYSFSVDMWSFACTAFELAT------ 98
            +V F +     +Q    + TR YRAPE+I L+  Y+ ++D+WS  C   EL        
Sbjct: 226 NLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENV 285
Query: 99  -----------GDMLF--AP--KSGQGFC----EDEDHLALMMELIGKMPRKIAIGGAQS 139
                      G   F  +P  K+G  F      + D L ++  ++G  P +  I   + 
Sbjct: 286 AYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILG-TPSEEDIEALEK 344
Query: 140 KDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQC 199
           +       D KR  R+        L +++  S  DA      L  +L F P KR T  +C
Sbjct: 345 E-------DAKRYIRIFPKREGTDLAERFPASSADA---IHLLKRMLVFNPNKRITINEC 394
Query: 200 LQHPWL 205
           L HP+ 
Sbjct: 395 LAHPFF 400

>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors Length = 283

Iteration: 1
 Score = 47.8 bits (112), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 48/192 (25%), Positives = 74/192 (38%), Gaps = 49/192 (25%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRA-NKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFAC 91
           KPE  L G     K+ DFG +  A + + A    T  Y  PE+I    +   VD+WS   
Sbjct: 138 KPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGV 197
Query: 92  TAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKR 151
             +E                            L+GK P        ++  Y + +   KR
Sbjct: 198 LCYEF---------------------------LVGKPP-------FEANTYQETY---KR 220
Query: 152 IRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNST 211
           I R++F   D        F    AR+    +  LL   P +RP  ++ L+HPW++  +S 
Sbjct: 221 ISRVEFTFPD--------FVTEGARDL---ISRLLKHNPSQRPMLREVLEHPWITANSSK 269
Query: 212 RDETKNKSNVEK 223
               +NK +  K
Sbjct: 270 PSNCQNKESASK 281

>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered N- Terminal Helix Length = 350

Iteration: 1
 Score = 47.4 bits (111), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 24/67 (35%), Positives = 34/67 (50%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACT 92
           KPE  +       +V DFG A R   +      T +Y APE+IL  GY+ +VD W+    
Sbjct: 168 KPENLMIDQQGYIQVTDFGLAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVL 227
Query: 93  AFELATG 99
            +E+A G
Sbjct: 228 IYEMAAG 234

>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632 Length = 306

Iteration: 1
 Score = 47.4 bits (111), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 47/192 (24%), Positives = 74/192 (38%), Gaps = 49/192 (25%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEI-QTRQYRAPEVILRAGYSFSVDMWSFAC 91
           KPE  L G     K+ DFG +  A     +++  T  Y  PE+I    +   VD+WS   
Sbjct: 161 KPENLLLGSAGELKIADFGWSVHAPSSRRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 220
Query: 92  TAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKR 151
             +E                            L+GK P        ++  Y + +   KR
Sbjct: 221 LCYEF---------------------------LVGKPP-------FEANTYQETY---KR 243
Query: 152 IRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNST 211
           I R++F   D        F    AR+    +  LL   P +RP  ++ L+HPW++  +S 
Sbjct: 244 ISRVEFTFPD--------FVTEGARDL---ISRLLKHNPSQRPMLREVLEHPWITANSSK 292
Query: 212 RDETKNKSNVEK 223
               +NK +  K
Sbjct: 293 PSNCQNKESASK 304

>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent Protein Kinase Reveals Unexpected Apoenzyme Conformation Length = 350

Iteration: 1
 Score = 47.4 bits (111), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 24/67 (35%), Positives = 34/67 (50%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACT 92
           KPE  L       +V DFG A R   +      T +Y APE+IL  GY+ +VD W+    
Sbjct: 168 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVL 227
Query: 93  AFELATG 99
            +++A G
Sbjct: 228 IYQMAAG 234

>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta Length = 676

Iteration: 1
 Score = 47.0 bits (110), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 39/76 (51%), Gaps = 8/76 (10%)
Query: 32  PKPERCLDGIDMRCKVVDFGNACRANKQ--FAEEIQTRQYRAPEVILRAGYSFSVDMWSF 89
           P P+R +       K++D G A   ++     E + T QY APE++ +  Y+ +VD WSF
Sbjct: 156 PGPQRLIH------KIIDLGYAKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSF 209
Query: 90  ACTAFELATGDMLFAP 105
              AFE  TG   F P
Sbjct: 210 GTLAFECITGFRPFLP 225

>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By Roscovitine, Aloisine And Indirubin. Length = 292

Iteration: 1
 Score = 47.0 bits (110), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 48/179 (26%), Positives = 75/179 (41%), Gaps = 24/179 (13%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRA----NKQFAEEIQTRQYRAPEVILRAG-YSFSVDMW 87
           KP+  L   +   K+ +FG A RA     + ++ E+ T  YR P+V+  A  YS S+DMW
Sbjct: 128 KPQNLLINRNGELKLANFGLA-RAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMW 186
Query: 88  SFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHG 147
           S  C   ELA       P +     + +D L  +  L+G    +      +  DY     
Sbjct: 187 SAGCIFAELANAGRPLFPGN-----DVDDQLKRIFRLLGTPTEEQWPSMTKLPDY----- 236
Query: 148 DLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLS 206
                +    +     LV+         R   + L  LL   P +R +A++ LQHP+ S
Sbjct: 237 -----KPYPMYPATTSLVNVVPKLNATGR---DLLQNLLKCNPVQRISAEEALQHPYFS 287

>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta (I4122) Length = 677

Iteration: 1
 Score = 47.0 bits (110), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 39/76 (51%), Gaps = 8/76 (10%)
Query: 32  PKPERCLDGIDMRCKVVDFGNACRANKQ--FAEEIQTRQYRAPEVILRAGYSFSVDMWSF 89
           P P+R +       K++D G A   ++     E + T QY APE++ +  Y+ +VD WSF
Sbjct: 157 PGPQRLIH------KIIDLGYAKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSF 210
Query: 90  ACTAFELATGDMLFAP 105
              AFE  TG   F P
Sbjct: 211 GTLAFECITGFRPFLP 226

>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By Mutational Studies Length = 298

Iteration: 1
 Score = 47.0 bits (110), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 65/181 (35%), Gaps = 52/181 (28%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRAN--KQFAEEIQTRQYRAPEVIL------RAGYSFSV 84
           KPE  L   DM  K+ DFG +C+ +  ++      T  Y APE+I         GY   V
Sbjct: 151 KPENILLDDDMNIKLTDFGFSCQLDPGEKLRSVCGTPSYLAPEIIECSMNDNHPGYGKEV 210
Query: 85  DMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFD 144
           DMWS     + L  G   F  +             LM+ +I  M      G  +  DY D
Sbjct: 211 DMWSTGVIMYTLLAGSPPFWHRKQM----------LMLRMI--MSGNYQFGSPEWDDYSD 258
Query: 145 RHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPW 204
              DL          + R LV                        P+KR TA++ L HP+
Sbjct: 259 TVKDL----------VSRFLV----------------------VQPQKRYTAEEALAHPF 286
Query: 205 L 205
Sbjct: 287 F 287

>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase Length = 314

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/165 (26%), Positives = 62/165 (37%), Gaps = 48/165 (29%)
Query: 44  RCKVVDFGNACRANKQFAEE---IQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGD 100
             K+ DFG A +     A+    I T  + APEVI   GY+   D+WS   TA E+A G 
Sbjct: 163 HAKLADFGVAGQLTDXMAKRNXVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGK 222
Query: 101 MLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSL 160
             +A          + H    + +I   P                       R+ + WS 
Sbjct: 223 PPYA----------DIHPMRAIFMIPTNPPPT-------------------FRKPELWS- 252
Query: 161 DRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 205
                            F +F+   L  +PE+R TA Q LQHP++
Sbjct: 253 ---------------DNFTDFVKQCLVKSPEQRATATQLLQHPFV 282

>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Compound 902 Length = 301

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Query: 42  DMRCKVVDFGNACRA---NKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELAT 98
           DM  K+ DFG A +     ++  +   T  Y APEV+ + G+SF VD+WS  C  + L  
Sbjct: 162 DMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLV 221
Query: 99  GDMLF 103
           G   F
Sbjct: 222 GKPPF 226

>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain. Length = 317

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Query: 42  DMRCKVVDFGNACRA---NKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELAT 98
           DM  K+ DFG A +     ++  +   T  Y APEV+ + G+SF VD+WS  C  + L  
Sbjct: 178 DMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLV 237
Query: 99  GDMLF 103
           G   F
Sbjct: 238 GKPPF 242

>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A 5-Aminopyrimidinyl Quinazoline Inhibitor Length = 283

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 47/192 (24%), Positives = 73/192 (38%), Gaps = 49/192 (25%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEI-QTRQYRAPEVILRAGYSFSVDMWSFAC 91
           KPE  L G     K+ DFG +  A      ++  T  Y  PE+I    +   VD+WS   
Sbjct: 140 KPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 199
Query: 92  TAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKR 151
             +E                            L+GK P        ++  Y + +   KR
Sbjct: 200 LCYEF---------------------------LVGKPP-------FEANTYQETY---KR 222
Query: 152 IRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNST 211
           I R++F   D        F    AR+    +  LL   P +RP  ++ L+HPW++  +S 
Sbjct: 223 ISRVEFTFPD--------FVTEGARDL---ISRLLKHNPSQRPMLREVLEHPWITANSSK 271
Query: 212 RDETKNKSNVEK 223
               +NK +  K
Sbjct: 272 PSNCQNKESASK 283

>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure Length = 285

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 47/192 (24%), Positives = 72/192 (37%), Gaps = 49/192 (25%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQ-TRQYRAPEVILRAGYSFSVDMWSFAC 91
           KPE  L G     K+ DFG +  A       +  T  Y  PE+I    +   VD+WS   
Sbjct: 140 KPENLLLGSAGELKIADFGWSVHAPSSRRXXLXGTLDYLPPEMIEGRMHDEKVDLWSLGV 199
Query: 92  TAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKR 151
             +E                            L+GK P        ++  Y + +   KR
Sbjct: 200 LCYEF---------------------------LVGKPP-------FEANTYQETY---KR 222
Query: 152 IRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNST 211
           I R++F   D        F    AR+    +  LL   P +RP  ++ L+HPW++  +S 
Sbjct: 223 ISRVEFTFPD--------FVTEGARDL---ISRLLKHNPSQRPMLREVLEHPWITANSSK 271
Query: 212 RDETKNKSNVEK 223
               +NK +  K
Sbjct: 272 PSNCQNKESASK 283

>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka C-Subunit:amp-Pnp:mg2+ Complex Length = 350

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 23/67 (34%), Positives = 34/67 (50%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACT 92
           KPE  +       +V DFG A R   +      T +Y APE+I+  GY+ +VD W+    
Sbjct: 168 KPENLIIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIIISKGYNKAVDWWALGVL 227
Query: 93  AFELATG 99
            +E+A G
Sbjct: 228 IYEMAAG 234

>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In Complex With Ca2+ And Amppnp Length = 494

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 49/182 (26%), Positives = 68/182 (37%), Gaps = 58/182 (31%)
Query: 33  KPERCL---DGIDMRCKVVDFGNAC--RANKQFAEEIQTRQYRAPEVILRAGYSFSVDMW 87
           KPE  L      D   K+VDFG +      K+  E + T  Y APEV LR  Y    D+W
Sbjct: 163 KPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEV-LRKKYDEKCDVW 221
Query: 88  SFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHG 147
           S     F L  G   + P  GQ    D++ L           RK+  G            
Sbjct: 222 SIGVILFILLAG---YPPFGGQ---TDQEIL-----------RKVEKG------------ 252
Query: 148 DLKRIRRLKFWSLDRLLVDKYRFSETDAREFAE----FLVPLLDFTPEKRPTAQQCLQHP 203
                              KY F   + +  +E     +  +L F  ++R +AQQ L+HP
Sbjct: 253 -------------------KYTFDSPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALEHP 293
Query: 204 WL 205
           W+
Sbjct: 294 WI 295

>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain Length = 311

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 47/178 (26%), Positives = 74/178 (41%), Gaps = 23/178 (12%)
Query: 33  KPERCLDGIDMRCKVVDFGNA---CRANKQFAEEIQTRQYRAPEVIL-RAGYSFSVDMWS 88
           KPE  L       K+ DFG A      +  + +E+ TR YR+PE+++    Y   VD+W+
Sbjct: 129 KPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVGDTQYGPPVDVWA 188
Query: 89  FACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKM-PRKIAIGGAQSKDYFDRHG 147
             C   EL +G  L+  KS      D D L L+ + +G + PR   +    +  YF    
Sbjct: 189 IGCVFAELLSGVPLWPGKS------DVDQLYLIRKTLGDLIPRHQQV--FSTNQYFS--- 237
Query: 148 DLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 205
                  +K    + +   + +F           L   L   P +R T +Q L HP+ 
Sbjct: 238 ------GVKIPDPEDMEPLELKFPNISYPALG-LLKGCLHMDPTERLTCEQLLHHPYF 288

>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1) Catalytic Domain Length = 317

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 26/67 (38%), Positives = 35/67 (52%), Gaps = 7/67 (10%)
Query: 42  DMRCKVVDFGNACRANKQFAEEIQ-----TRQYRAPEVILRAGYSFSVDMWSFACTAFEL 96
           DM  K+ DFG A +   +F  E +     T  Y APEV+ + G+SF VD+WS  C  + L
Sbjct: 178 DMDVKIGDFGLATKI--EFDGERKKTLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTL 235
Query: 97  ATGDMLF 103
             G   F
Sbjct: 236 LVGKPPF 242

>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Adp Length = 317

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 26/67 (38%), Positives = 35/67 (52%), Gaps = 7/67 (10%)
Query: 42  DMRCKVVDFGNACRANKQFAEEIQ-----TRQYRAPEVILRAGYSFSVDMWSFACTAFEL 96
           DM  K+ DFG A +   +F  E +     T  Y APEV+ + G+SF VD+WS  C  + L
Sbjct: 178 DMDVKIGDFGLATKI--EFDGERKKXLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTL 235
Query: 97  ATGDMLF 103
             G   F
Sbjct: 236 LVGKPPF 242

>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679 Length = 279

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 47/192 (24%), Positives = 73/192 (38%), Gaps = 49/192 (25%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEI-QTRQYRAPEVILRAGYSFSVDMWSFAC 91
           KPE  L G     K+ DFG +  A     + +  T  Y  PE+I    +   VD+WS   
Sbjct: 136 KPENLLLGSAGELKIADFGWSVHAPSSRRDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 195
Query: 92  TAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKR 151
             +E                            L+GK P        ++  Y + +   KR
Sbjct: 196 LCYEF---------------------------LVGKPP-------FEANTYQETY---KR 218
Query: 152 IRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNST 211
           I R++F   D        F    AR+    +  LL   P +RP  ++ L+HPW++  +S 
Sbjct: 219 ISRVEFTFPD--------FVTEGARDL---ISRLLKHNPSQRPMLREVLEHPWITANSSK 267
Query: 212 RDETKNKSNVEK 223
               +NK +  K
Sbjct: 268 PSNCQNKESASK 279

>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A Inhibitors: Structure Basis For Potency And Specificity Length = 279

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 47/192 (24%), Positives = 73/192 (38%), Gaps = 49/192 (25%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEI-QTRQYRAPEVILRAGYSFSVDMWSFAC 91
           KPE  L G     K+ DFG +  A      ++  T  Y  PE+I    +   VD+WS   
Sbjct: 136 KPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 195
Query: 92  TAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKR 151
             +E                            L+GK P        ++  Y + +   KR
Sbjct: 196 LCYEF---------------------------LVGKPP-------FEANTYQETY---KR 218
Query: 152 IRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNST 211
           I R++F   D        F    AR+    +  LL   P +RP  ++ L+HPW++  +S 
Sbjct: 219 ISRVEFTFPD--------FVTEGARDL---ISRLLKHNPSQRPMLREVLEHPWITANSSK 267
Query: 212 RDETKNKSNVEK 223
               +NK +  K
Sbjct: 268 PSNCQNKESASK 279

>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B (STK17B) Length = 327

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 44/166 (26%), Positives = 64/166 (38%), Gaps = 54/166 (32%)
Query: 46  KVVDFG------NACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATG 99
           K+VDFG      +AC    +  E + T +Y APE++     + + DMW+    A+ L T 
Sbjct: 174 KIVDFGMSRKIGHAC----ELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTH 229
Query: 100 DMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWS 159
              F  +  Q     E +L +                  + DY +            F S
Sbjct: 230 TSPFVGEDNQ-----ETYLNI---------------SQVNVDYSEE----------TFSS 259
Query: 160 LDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 205
           + +L  D              F+  LL   PEKRPTA+ CL H WL
Sbjct: 260 VSQLATD--------------FIQSLLVKNPEKRPTAEICLSHSWL 291

>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/67 (35%), Positives = 33/67 (49%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACT 92
           KPE  L       +V DFG A R   +      T +Y AP +IL  GY+ +VD W+    
Sbjct: 168 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPAIILSKGYNKAVDWWALGVL 227
Query: 93  AFELATG 99
            +E+A G
Sbjct: 228 IYEMAAG 234

>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304 Length = 326

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/193 (23%), Positives = 72/193 (37%), Gaps = 55/193 (28%)
Query: 31  LPKPERCLDGIDMRCKVVDFGNACRAN--KQFAEEIQTRQYRAPEVILRAGYSFSVDMWS 88
           +PKP         R K++DFG A + +   +F     T ++ APE++         DMWS
Sbjct: 152 VPKP---------RIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWS 202
Query: 89  FACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGD 148
                + L +G   F                                           GD
Sbjct: 203 IGVITYILLSGASPFL------------------------------------------GD 220
Query: 149 LKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLR 208
            K+       +++    D+Y FS T A    +F+  LL   P+KR T Q  LQHPW+  +
Sbjct: 221 TKQETLANVSAVNYEFEDEY-FSNTSALA-KDFIRRLLVKDPKKRMTIQDSLQHPWIKPK 278
Query: 209 NSTRDETKNKSNV 221
           ++ +  ++  S V
Sbjct: 279 DTQQALSRKASAV 291

>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358 Length = 280

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/192 (24%), Positives = 72/192 (37%), Gaps = 49/192 (25%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEI-QTRQYRAPEVILRAGYSFSVDMWSFAC 91
           KPE  L G     K+ DFG +  A       +  T  Y  PE+I    +   VD+WS   
Sbjct: 135 KPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 194
Query: 92  TAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKR 151
             +E                            L+GK P        ++  Y + +   KR
Sbjct: 195 LCYEF---------------------------LVGKPP-------FEANTYQETY---KR 217
Query: 152 IRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNST 211
           I R++F   D        F    AR+    +  LL   P +RP  ++ L+HPW++  +S 
Sbjct: 218 ISRVEFTFPD--------FVTEGARDL---ISRLLKHNPSQRPMLREVLEHPWITANSSK 266
Query: 212 RDETKNKSNVEK 223
               +NK +  K
Sbjct: 267 PSNCQNKESASK 278

>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs Resolution) Length = 362

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/154 (25%), Positives = 68/154 (44%), Gaps = 25/154 (16%)
Query: 56  ANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCED 114
           ANK     +  R YRAPE++++  G++  VDMWS  C   E+     LF    G  F   
Sbjct: 188 ANK--THYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALF---RGSTFY-- 240
Query: 115 EDHLALMMELIG--KMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSE 172
            + L  ++E++G  K+   +      ++DY                SL  +    +    
Sbjct: 241 -NQLNKIVEVVGTPKIEDVVMFSSPSARDYLRN-------------SLSNVPARAWTAVV 286
Query: 173 TDAREFA-EFLVPLLDFTPEKRPTAQQCLQHPWL 205
             A   A + +  +L+F P++R + +Q L+HP+ 
Sbjct: 287 PTADPVALDLIAKMLEFNPQRRISTEQALRHPYF 320

>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With Sb203580 Length = 362

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/154 (25%), Positives = 68/154 (44%), Gaps = 25/154 (16%)
Query: 56  ANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCED 114
           ANK     +  R YRAPE++++  G++  VDMWS  C   E+     LF    G  F   
Sbjct: 188 ANK--THYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALF---RGSTFY-- 240
Query: 115 EDHLALMMELIG--KMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSE 172
            + L  ++E++G  K+   +      ++DY                SL  +    +    
Sbjct: 241 -NQLNKIVEVVGTPKIEDVVMFSSPSARDYLRN-------------SLSNVPARAWTAVV 286
Query: 173 TDAREFA-EFLVPLLDFTPEKRPTAQQCLQHPWL 205
             A   A + +  +L+F P++R + +Q L+HP+ 
Sbjct: 287 PTADPVALDLIAKMLEFNPQRRISTEQALRHPYF 320

>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor Length = 285

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/192 (24%), Positives = 72/192 (37%), Gaps = 49/192 (25%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEI-QTRQYRAPEVILRAGYSFSVDMWSFAC 91
           KPE  L G     K+ DFG +  A       +  T  Y  PE+I    +   VD+WS   
Sbjct: 140 KPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 199
Query: 92  TAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKR 151
             +E                            L+GK P        ++  Y + +   KR
Sbjct: 200 LCYEF---------------------------LVGKPP-------FEANTYQETY---KR 222
Query: 152 IRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNST 211
           I R++F   D        F    AR+    +  LL   P +RP  ++ L+HPW++  +S 
Sbjct: 223 ISRVEFTFPD--------FVTEGARDL---ISRLLKHNPSQRPMLREVLEHPWITANSSK 271
Query: 212 RDETKNKSNVEK 223
               +NK +  K
Sbjct: 272 PSNCQNKESASK 283

>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine Inhibitor Length = 283

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/192 (24%), Positives = 72/192 (37%), Gaps = 49/192 (25%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEI-QTRQYRAPEVILRAGYSFSVDMWSFAC 91
           KPE  L G     K+ DFG +  A       +  T  Y  PE+I    +   VD+WS   
Sbjct: 138 KPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 197
Query: 92  TAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKR 151
             +E                            L+GK P        ++  Y + +   KR
Sbjct: 198 LCYEF---------------------------LVGKPP-------FEANTYQETY---KR 220
Query: 152 IRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNST 211
           I R++F   D        F    AR+    +  LL   P +RP  ++ L+HPW++  +S 
Sbjct: 221 ISRVEFTFPD--------FVTEGARDL---ISRLLKHNPSQRPMLREVLEHPWITANSSK 269
Query: 212 RDETKNKSNVEK 223
               +NK +  K
Sbjct: 270 PSNCQNKESASK 281

>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form) Length = 285

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/192 (24%), Positives = 72/192 (37%), Gaps = 49/192 (25%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEI-QTRQYRAPEVILRAGYSFSVDMWSFAC 91
           KPE  L G     K+ DFG +  A       +  T  Y  PE+I    +   VD+WS   
Sbjct: 140 KPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 199
Query: 92  TAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKR 151
             +E                            L+GK P        ++  Y + +   KR
Sbjct: 200 LCYEF---------------------------LVGKPP-------FEANTYQETY---KR 222
Query: 152 IRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNST 211
           I R++F   D        F    AR+    +  LL   P +RP  ++ L+HPW++  +S 
Sbjct: 223 ISRVEFTFPD--------FVTEGARDL---ISRLLKHNPSQRPMLREVLEHPWITANSSK 271
Query: 212 RDETKNKSNVEK 223
               +NK +  K
Sbjct: 272 PSNCQNKESASK 283

>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain Length = 290

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 49/179 (27%), Positives = 68/179 (37%), Gaps = 47/179 (26%)
Query: 33  KPERCLDGIDMRCKVVDFGNAC--------RANKQFAEEIQTRQYRAPEVILRA-GYSFS 83
           K    L G D   ++ DFG +           NK     + T  + APEV+ +  GY F 
Sbjct: 143 KAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFK 202
Query: 84  VDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYF 143
            D+WSF  TA ELATG    AP     + +      LM+ L    P      G Q K+  
Sbjct: 203 ADIWSFGITAIELATGA---AP-----YHKYPPMKVLMLTLQNDPPSLET--GVQDKEML 252
Query: 144 DRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQH 202
            ++G                            + F + +   L   PEKRPTA + L+H
Sbjct: 253 KKYG----------------------------KSFRKMISLCLQKDPEKRPTAAELLRH 283

>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target Length = 303

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 49/179 (27%), Positives = 68/179 (37%), Gaps = 47/179 (26%)
Query: 33  KPERCLDGIDMRCKVVDFGNAC--------RANKQFAEEIQTRQYRAPEVILRA-GYSFS 83
           K    L G D   ++ DFG +           NK     + T  + APEV+ +  GY F 
Sbjct: 148 KAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFK 207
Query: 84  VDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYF 143
            D+WSF  TA ELATG    AP     + +      LM+ L    P      G Q K+  
Sbjct: 208 ADIWSFGITAIELATGA---AP-----YHKYPPMKVLMLTLQNDPPSLET--GVQDKEML 257
Query: 144 DRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQH 202
            ++G                            + F + +   L   PEKRPTA + L+H
Sbjct: 258 KKYG----------------------------KSFRKMISLCLQKDPEKRPTAAELLRH 288

>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302 Length = 302

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/197 (23%), Positives = 75/197 (38%), Gaps = 57/197 (28%)
Query: 31  LPKPERCLDGIDMRCKVVDFGNACRAN--KQFAEEIQTRQYRAPEVILRAGYSFSVDMWS 88
           +PKP         R K++DFG A + +   +F     T ++ APE++         DMWS
Sbjct: 152 VPKP---------RIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWS 202
Query: 89  FACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGD 148
                + L +G   F                                           GD
Sbjct: 203 IGVITYILLSGASPFL------------------------------------------GD 220
Query: 149 LKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLR 208
            K+       +++    D+Y FS T A    +F+  LL   P+KR T Q  LQHPW+  +
Sbjct: 221 TKQETLANVSAVNYEFEDEY-FSNTSALA-KDFIRRLLVKDPKKRMTIQDSLQHPWIKPK 278
Query: 209 NSTRDETKNKS--NVEK 223
           ++ +  ++  S  N+EK
Sbjct: 279 DTQQALSRKASAVNMEK 295

>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287, Thr288 And Bound To Tpx2 1-43 Length = 282

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/192 (24%), Positives = 72/192 (37%), Gaps = 49/192 (25%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEI-QTRQYRAPEVILRAGYSFSVDMWSFAC 91
           KPE  L G     K+ DFG +  A       +  T  Y  PE+I    +   VD+WS   
Sbjct: 137 KPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 196
Query: 92  TAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKR 151
             +E                            L+GK P        ++  Y + +   KR
Sbjct: 197 LCYEF---------------------------LVGKPP-------FEANTYQETY---KR 219
Query: 152 IRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNST 211
           I R++F   D        F    AR+    +  LL   P +RP  ++ L+HPW++  +S 
Sbjct: 220 ISRVEFTFPD--------FVTEGARDL---ISRLLKHNPSQRPMLREVLEHPWITANSSK 268
Query: 212 RDETKNKSNVEK 223
               +NK +  K
Sbjct: 269 PSNCQNKESASK 280

>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626 Length = 306

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/192 (24%), Positives = 72/192 (37%), Gaps = 49/192 (25%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEI-QTRQYRAPEVILRAGYSFSVDMWSFAC 91
           KPE  L G     K+ DFG +  A       +  T  Y  PE+I    +   VD+WS   
Sbjct: 161 KPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 220
Query: 92  TAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKR 151
             +E                            L+GK P        ++  Y + +   KR
Sbjct: 221 LCYEF---------------------------LVGKPP-------FEANTYQETY---KR 243
Query: 152 IRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNST 211
           I R++F   D        F    AR+    +  LL   P +RP  ++ L+HPW++  +S 
Sbjct: 244 ISRVEFTFPD--------FVTEGARDL---ISRLLKHNPSQRPMLREVLEHPWITANSSK 292
Query: 212 RDETKNKSNVEK 223
               +NK +  K
Sbjct: 293 PSNCQNKESASK 304

>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312 Length = 312

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/193 (23%), Positives = 72/193 (37%), Gaps = 55/193 (28%)
Query: 31  LPKPERCLDGIDMRCKVVDFGNACRAN--KQFAEEIQTRQYRAPEVILRAGYSFSVDMWS 88
           +PKP         R K++DFG A + +   +F     T ++ APE++         DMWS
Sbjct: 152 VPKP---------RIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWS 202
Query: 89  FACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGD 148
                + L +G   F                                           GD
Sbjct: 203 IGVITYILLSGASPFL------------------------------------------GD 220
Query: 149 LKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLR 208
            K+       +++    D+Y FS T A    +F+  LL   P+KR T Q  LQHPW+  +
Sbjct: 221 TKQETLANVSAVNYEFEDEY-FSNTSALA-KDFIRRLLVKDPKKRMTIQDSLQHPWIKPK 278
Query: 209 NSTRDETKNKSNV 221
           ++ +  ++  S V
Sbjct: 279 DTQQALSRKASAV 291

>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp Length = 285

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 47/192 (24%), Positives = 71/192 (36%), Gaps = 49/192 (25%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEI-QTRQYRAPEVILRAGYSFSVDMWSFAC 91
           KPE  L G     K+ DFG +  A       +  T  Y  PE I    +   VD+WS   
Sbjct: 140 KPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEXIEGRXHDEKVDLWSLGV 199
Query: 92  TAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKR 151
             +E                            L+GK P        ++  Y + +   KR
Sbjct: 200 LCYEF---------------------------LVGKPP-------FEANTYQETY---KR 222
Query: 152 IRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNST 211
           I R++F   D        F    AR+    +  LL   P +RP  ++ L+HPW++  +S 
Sbjct: 223 ISRVEFTFPD--------FVTEGARDL---ISRLLKHNPSQRPXLREVLEHPWITANSSK 271
Query: 212 RDETKNKSNVEK 223
               +NK +  K
Sbjct: 272 PSNCQNKESASK 283

>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine- Threonine Kinase Length = 297

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 47/192 (24%), Positives = 72/192 (37%), Gaps = 49/192 (25%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEI-QTRQYRAPEVILRAGYSFSVDMWSFAC 91
           KPE  L G     K+ DFG +  A       +  T  Y  PE+I    +   VD+WS   
Sbjct: 152 KPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 211
Query: 92  TAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKR 151
             +E                            L+GK P        ++  Y + +   KR
Sbjct: 212 LCYEF---------------------------LVGKPP-------FEANTYQETY---KR 234
Query: 152 IRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNST 211
           I R++F   D        F    AR+    +  LL   P +RP  ++ L+HPW++  +S 
Sbjct: 235 ISRVEFTFPD--------FVTEGARDL---ISRLLKHNPSQRPMLREVLEHPWITANSSK 283
Query: 212 RDETKNKSNVEK 223
               +NK +  K
Sbjct: 284 PSNCQNKESASK 295

>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human Pdk1 Complex 2 Length = 311

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 35/76 (46%), Gaps = 13/76 (17%)
Query: 33  KPERCLDGIDMRCKVVDFGNA---------CRANKQFAEEIQTRQYRAPEVILRAGYSFS 83
           KPE  L   DM  ++ DFG A          RAN      + T QY +PE++     S S
Sbjct: 159 KPENILLNEDMHIQITDFGTAKVLSPESKQARANSF----VGTAQYVSPELLTEKSASKS 214
Query: 84  VDMWSFACTAFELATG 99
            D+W+  C  ++L  G
Sbjct: 215 SDLWALGCIIYQLVAG 230

>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like Kinase 1 Length = 335

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Query: 42  DMRCKVVDFGNACRANKQFAEE---IQTRQYRAPEVILRAGYSFSVDMWSFACTAFELAT 98
           D+  K+ DFG A +       +     T  Y APEV+ + G+SF VD+WS  C  + L  
Sbjct: 177 DLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLV 236
Query: 99  GDMLF 103
           G   F
Sbjct: 237 GKPPF 241

>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A Benzolactam-Derived Inhibitor Length = 333

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Query: 42  DMRCKVVDFGNACRANKQFAEE---IQTRQYRAPEVILRAGYSFSVDMWSFACTAFELAT 98
           D+  K+ DFG A +       +     T  Y APEV+ + G+SF VD+WS  C  + L  
Sbjct: 175 DLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLV 234
Query: 99  GDMLF 103
           G   F
Sbjct: 235 GKPPF 239

>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-3beta Inhibitors Length = 371

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 34/103 (33%), Positives = 51/103 (49%), Gaps = 10/103 (9%)
Query: 33  KPERCLDGIDMRC-KVVDFGNACRA--NKQFAEEIQTRQYRAPEVILRAG-YSFSVDMWS 88
           KP+  L   D    K+ DFG+A +    +     I +R YRAPE+I  A  Y+ S+D+WS
Sbjct: 161 KPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWS 220
Query: 89  FACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRK 131
             C   EL  G  +F   SG       D L  +++++G   R+
Sbjct: 221 AGCVLAELLLGQPIFPGDSGV------DQLVEIIKVLGTPTRE 257

>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective Gsk-3 Inhibitors Length = 367

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 34/103 (33%), Positives = 51/103 (49%), Gaps = 10/103 (9%)
Query: 33  KPERCLDGIDMRC-KVVDFGNACRA--NKQFAEEIQTRQYRAPEVILRAG-YSFSVDMWS 88
           KP+  L   D    K+ DFG+A +    +     I +R YRAPE+I  A  Y+ S+D+WS
Sbjct: 157 KPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWS 216
Query: 89  FACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRK 131
             C   EL  G  +F   SG       D L  +++++G   R+
Sbjct: 217 AGCVLAELLLGQPIFPGDSGV------DQLVEIIKVLGTPTRE 253

>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In Complex With A Selective Darpin Length = 315

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Query: 42  DMRCKVVDFGNACRANKQFAEE---IQTRQYRAPEVILRAGYSFSVDMWSFACTAFELAT 98
           D+  K+ DFG A +       +     T  Y APEV+ + G+SF VD+WS  C  + L  
Sbjct: 157 DLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLV 216
Query: 99  GDMLF 103
           G   F
Sbjct: 217 GKPPF 221

>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Imidazopyridine Inhibitor Length = 382

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 34/103 (33%), Positives = 51/103 (49%), Gaps = 10/103 (9%)
Query: 33  KPERCLDGIDMRC-KVVDFGNACRA--NKQFAEEIQTRQYRAPEVILRAG-YSFSVDMWS 88
           KP+  L   D    K+ DFG+A +    +     I +R YRAPE+I  A  Y+ S+D+WS
Sbjct: 161 KPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWS 220
Query: 89  FACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRK 131
             C   EL  G  +F   SG       D L  +++++G   R+
Sbjct: 221 AGCVLAELLLGQPIFPGDSGV------DQLVEIIKVLGTPTRE 257

>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 311

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Query: 42  DMRCKVVDFGNACRANKQFAEE---IQTRQYRAPEVILRAGYSFSVDMWSFACTAFELAT 98
           D+  K+ DFG A +       +     T  Y APEV+ + G+SF VD+WS  C  + L  
Sbjct: 153 DLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLV 212
Query: 99  GDMLF 103
           G   F
Sbjct: 213 GKPPF 217

>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With Nms-P937 Length = 311

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Query: 42  DMRCKVVDFGNACRANKQFAEE---IQTRQYRAPEVILRAGYSFSVDMWSFACTAFELAT 98
           D+  K+ DFG A +       +     T  Y APEV+ + G+SF VD+WS  C  + L  
Sbjct: 153 DLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLV 212
Query: 99  GDMLF 103
           G   F
Sbjct: 213 GKPPF 217

>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With Frattide Peptide Length = 378

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 34/103 (33%), Positives = 51/103 (49%), Gaps = 10/103 (9%)
Query: 33  KPERCLDGIDMRC-KVVDFGNACRA--NKQFAEEIQTRQYRAPEVILRAG-YSFSVDMWS 88
           KP+  L   D    K+ DFG+A +    +     I +R YRAPE+I  A  Y+ S+D+WS
Sbjct: 168 KPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWS 227
Query: 89  FACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRK 131
             C   EL  G  +F   SG       D L  +++++G   R+
Sbjct: 228 AGCVLAELLLGQPIFPGDSGV------DQLVEIIKVLGTPTRE 264

>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide And Inhibitor 7d Length = 350

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 34/103 (33%), Positives = 51/103 (49%), Gaps = 10/103 (9%)
Query: 33  KPERCLDGIDMRC-KVVDFGNACRA--NKQFAEEIQTRQYRAPEVILRAG-YSFSVDMWS 88
           KP+  L   D    K+ DFG+A +    +     I +R YRAPE+I  A  Y+ S+D+WS
Sbjct: 149 KPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWS 208
Query: 89  FACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRK 131
             C   EL  G  +F   SG       D L  +++++G   R+
Sbjct: 209 AGCVLAELLLGQPIFPGDSGV------DQLVEIIKVLGTPTRE 245

>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase 3beta In Complex With An Inhibitor Length = 350

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 34/103 (33%), Positives = 51/103 (49%), Gaps = 10/103 (9%)
Query: 33  KPERCLDGIDMRC-KVVDFGNACRA--NKQFAEEIQTRQYRAPEVILRAG-YSFSVDMWS 88
           KP+  L   D    K+ DFG+A +    +     I +R YRAPE+I  A  Y+ S+D+WS
Sbjct: 150 KPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWS 209
Query: 89  FACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRK 131
             C   EL  G  +F   SG       D L  +++++G   R+
Sbjct: 210 AGCVLAELLLGQPIFPGDSGV------DQLVEIIKVLGTPTRE 246

>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex Length = 349

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 34/103 (33%), Positives = 51/103 (49%), Gaps = 10/103 (9%)
Query: 33  KPERCLDGIDMRC-KVVDFGNACRA--NKQFAEEIQTRQYRAPEVILRAG-YSFSVDMWS 88
           KP+  L   D    K+ DFG+A +    +     I +R YRAPE+I  A  Y+ S+D+WS
Sbjct: 149 KPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWS 208
Query: 89  FACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRK 131
             C   EL  G  +F   SG       D L  +++++G   R+
Sbjct: 209 AGCVLAELLLGQPIFPGDSGV------DQLVEIIKVLGTPTRE 245

>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta (Gsk3b) In Complex With Inhibitor 142 Length = 430

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 34/103 (33%), Positives = 51/103 (49%), Gaps = 10/103 (9%)
Query: 33  KPERCLDGIDMRC-KVVDFGNACRA--NKQFAEEIQTRQYRAPEVILRAG-YSFSVDMWS 88
           KP+  L   D    K+ DFG+A +    +     I +R YRAPE+I  A  Y+ S+D+WS
Sbjct: 183 KPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWS 242
Query: 89  FACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRK 131
             C   EL  G  +F   SG       D L  +++++G   R+
Sbjct: 243 AGCVLAELLLGQPIFPGDSGV------DQLVEIIKVLGTPTRE 279

>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide Length = 350

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 34/103 (33%), Positives = 51/103 (49%), Gaps = 10/103 (9%)
Query: 33  KPERCLDGIDMRC-KVVDFGNACRA--NKQFAEEIQTRQYRAPEVILRAG-YSFSVDMWS 88
           KP+  L   D    K+ DFG+A +    +     I +R YRAPE+I  A  Y+ S+D+WS
Sbjct: 149 KPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWS 208
Query: 89  FACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRK 131
             C   EL  G  +F   SG       D L  +++++G   R+
Sbjct: 209 AGCVLAELLLGQPIFPGDSGV------DQLVEIIKVLGTPTRE 245

>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis- (Indole)maleimide Pyridinophane Inhibitor Length = 352

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 34/103 (33%), Positives = 51/103 (49%), Gaps = 10/103 (9%)
Query: 33  KPERCLDGIDMRC-KVVDFGNACRA--NKQFAEEIQTRQYRAPEVILRAG-YSFSVDMWS 88
           KP+  L   D    K+ DFG+A +    +     I +R YRAPE+I  A  Y+ S+D+WS
Sbjct: 149 KPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWS 208
Query: 89  FACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRK 131
             C   EL  G  +F   SG       D L  +++++G   R+
Sbjct: 209 AGCVLAELLLGQPIFPGDSGV------DQLVEIIKVLGTPTRE 245

>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A Gsk3beta Inhibitor Length = 287

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 46/190 (24%), Positives = 72/190 (37%), Gaps = 49/190 (25%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEI-QTRQYRAPEVILRAGYSFSVDMWSFAC 91
           KPE  L G     K+ DFG +  A      ++  T  Y  PE+I    +   VD+WS   
Sbjct: 135 KPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 194
Query: 92  TAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKR 151
             +E                            L+GK P        ++  Y + +   KR
Sbjct: 195 LCYEF---------------------------LVGKPP-------FEANTYQETY---KR 217
Query: 152 IRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNST 211
           I R++F   D        F    AR   + +  LL   P +RP  ++ L+HPW++  +S 
Sbjct: 218 ISRVEFTFPD--------FVTEGAR---DLISRLLKHNPSQRPMLREVLEHPWITANSSK 266
Query: 212 RDETKNKSNV 221
               +NK + 
Sbjct: 267 PSNCQNKESA 276

>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex Length = 353

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 34/103 (33%), Positives = 51/103 (49%), Gaps = 10/103 (9%)
Query: 33  KPERCLDGIDMRC-KVVDFGNACRA--NKQFAEEIQTRQYRAPEVILRAG-YSFSVDMWS 88
           KP+  L   D    K+ DFG+A +    +     I +R YRAPE+I  A  Y+ S+D+WS
Sbjct: 153 KPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWS 212
Query: 89  FACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRK 131
             C   EL  G  +F   SG       D L  +++++G   R+
Sbjct: 213 AGCVLAELLLGQPIFPGDSGV------DQLVEIIKVLGTPTRE 249

>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex Length = 334

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 45/193 (23%), Positives = 72/193 (37%), Gaps = 55/193 (28%)
Query: 31  LPKPERCLDGIDMRCKVVDFGNACRAN--KQFAEEIQTRQYRAPEVILRAGYSFSVDMWS 88
           +PKP         R K++DFG A + +   +F     T ++ APE++         DMWS
Sbjct: 152 VPKP---------RIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWS 202
Query: 89  FACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGD 148
                + L +G   F                                           GD
Sbjct: 203 IGVITYILLSGASPFL------------------------------------------GD 220
Query: 149 LKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLR 208
            K+       +++    D+Y FS T A    +F+  LL   P+KR T Q  LQHPW+  +
Sbjct: 221 TKQETLANVSAVNYEFEDEY-FSNTSALA-KDFIRRLLVKDPKKRMTIQDSLQHPWIKPK 278
Query: 209 NSTRDETKNKSNV 221
           ++ +  ++  S V
Sbjct: 279 DTQQALSRKASAV 291

>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536 Length = 294

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Query: 42  DMRCKVVDFGNACRANKQFAEE---IQTRQYRAPEVILRAGYSFSVDMWSFACTAFELAT 98
           D+  K+ DFG A +       +     T  Y APEV+ + G+SF VD+WS  C  + L  
Sbjct: 151 DLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLV 210
Query: 99  GDMLF 103
           G   F
Sbjct: 211 GKPPF 215

>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In Complexed With Inhibitor Length = 414

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 34/103 (33%), Positives = 51/103 (49%), Gaps = 10/103 (9%)
Query: 33  KPERCLDGIDMRC-KVVDFGNACRA--NKQFAEEIQTRQYRAPEVILRAG-YSFSVDMWS 88
           KP+  L   D    K+ DFG+A +    +     I +R YRAPE+I  A  Y+ S+D+WS
Sbjct: 177 KPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWS 236
Query: 89  FACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRK 131
             C   EL  G  +F   SG       D L  +++++G   R+
Sbjct: 237 AGCVLAELLLGQPIFPGDSGV------DQLVEIIKVLGTPTRE 273

>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With Adpnp Length = 275

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 46/189 (24%), Positives = 72/189 (38%), Gaps = 49/189 (25%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEI-QTRQYRAPEVILRAGYSFSVDMWSFAC 91
           KPE  L G     K+ DFG +  A      ++  T  Y  PE+I    +   VD+WS   
Sbjct: 135 KPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 194
Query: 92  TAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKR 151
             +E                            L+GK P        ++  Y + +   KR
Sbjct: 195 LCYEF---------------------------LVGKPP-------FEANTYQETY---KR 217
Query: 152 IRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNST 211
           I R++F   D        F    AR   + +  LL   P +RP  ++ L+HPW++  +S 
Sbjct: 218 ISRVEFTFPD--------FVTEGAR---DLISRLLKHNPSQRPMLREVLEHPWITANSSK 266
Query: 212 RDETKNKSN 220
               +NK +
Sbjct: 267 PSNCQNKES 275

>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Benzoimidazol Inhibitor Length = 372

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 34/103 (33%), Positives = 51/103 (49%), Gaps = 10/103 (9%)
Query: 33  KPERCLDGIDMRC-KVVDFGNACRA--NKQFAEEIQTRQYRAPEVILRAG-YSFSVDMWS 88
           KP+  L   D    K+ DFG+A +    +     I +R YRAPE+I  A  Y+ S+D+WS
Sbjct: 162 KPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWS 221
Query: 89  FACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRK 131
             C   EL  G  +F   SG       D L  +++++G   R+
Sbjct: 222 AGCVLAELLLGQPIFPGDSGV------DQLVEIIKVLGTPTRE 258

>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine Length = 424

Iteration: 1
 Score = 44.7 bits (104), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 34/103 (33%), Positives = 51/103 (49%), Gaps = 10/103 (9%)
Query: 33  KPERCLDGIDMRC-KVVDFGNACRA--NKQFAEEIQTRQYRAPEVILRAG-YSFSVDMWS 88
           KP+  L   D    K+ DFG+A +    +     I +R YRAPE+I  A  Y+ S+D+WS
Sbjct: 187 KPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWS 246
Query: 89  FACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRK 131
             C   EL  G  +F   SG       D L  +++++G   R+
Sbjct: 247 AGCVLAELLLGQPIFPGDSGV------DQLVEIIKVLGTPTRE 283

>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With 3-Indolyl-4- Arylmaleimide Inhibitor Length = 391

Iteration: 1
 Score = 44.7 bits (104), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 34/103 (33%), Positives = 51/103 (49%), Gaps = 10/103 (9%)
Query: 33  KPERCLDGIDMRC-KVVDFGNACRA--NKQFAEEIQTRQYRAPEVILRAG-YSFSVDMWS 88
           KP+  L   D    K+ DFG+A +    +     I +R YRAPE+I  A  Y+ S+D+WS
Sbjct: 154 KPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWS 213
Query: 89  FACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRK 131
             C   EL  G  +F   SG       D L  +++++G   R+
Sbjct: 214 AGCVLAELLLGQPIFPGDSGV------DQLVEIIKVLGTPTRE 250

>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor Length = 465

Iteration: 1
 Score = 44.7 bits (104), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 34/103 (33%), Positives = 51/103 (49%), Gaps = 10/103 (9%)
Query: 33  KPERCLDGIDMRC-KVVDFGNACRA--NKQFAEEIQTRQYRAPEVILRAG-YSFSVDMWS 88
           KP+  L   D    K+ DFG+A +    +     I +R YRAPE+I  A  Y+ S+D+WS
Sbjct: 228 KPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWS 287
Query: 89  FACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRK 131
             C   EL  G  +F   SG       D L  +++++G   R+
Sbjct: 288 AGCVLAELLLGQPIFPGDSGV------DQLVEIIKVLGTPTRE 324

>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With 6-Bromoindirubin-3'-Oxime Length = 350

Iteration: 1
 Score = 44.7 bits (104), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 34/103 (33%), Positives = 51/103 (49%), Gaps = 10/103 (9%)
Query: 33  KPERCLDGIDMRC-KVVDFGNACRA--NKQFAEEIQTRQYRAPEVILRAG-YSFSVDMWS 88
           KP+  L   D    K+ DFG+A +    +     I +R YRAPE+I  A  Y+ S+D+WS
Sbjct: 149 KPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWS 208
Query: 89  FACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRK 131
             C   EL  G  +F   SG       D L  +++++G   R+
Sbjct: 209 AGCVLAELLLGQPIFPGDSGV------DQLVEIIKVLGTPTRE 245

>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor That Attenuates Hyperactivity In Clock Mutant Mice Length = 350

Iteration: 1
 Score = 44.7 bits (104), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 34/103 (33%), Positives = 51/103 (49%), Gaps = 10/103 (9%)
Query: 33  KPERCLDGIDMRC-KVVDFGNACRA--NKQFAEEIQTRQYRAPEVILRAG-YSFSVDMWS 88
           KP+  L   D    K+ DFG+A +    +     I +R YRAPE+I  A  Y+ S+D+WS
Sbjct: 149 KPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWS 208
Query: 89  FACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRK 131
             C   EL  G  +F   SG       D L  +++++G   R+
Sbjct: 209 AGCVLAELLLGQPIFPGDSGV------DQLVEIIKVLGTPTRE 245

>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Length = 420

Iteration: 1
 Score = 44.7 bits (104), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 34/103 (33%), Positives = 51/103 (49%), Gaps = 10/103 (9%)
Query: 33  KPERCLDGIDMRC-KVVDFGNACRA--NKQFAEEIQTRQYRAPEVILRAG-YSFSVDMWS 88
           KP+  L   D    K+ DFG+A +    +     I +R YRAPE+I  A  Y+ S+D+WS
Sbjct: 183 KPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWS 242
Query: 89  FACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRK 131
             C   EL  G  +F   SG       D L  +++++G   R+
Sbjct: 243 AGCVLAELLLGQPIFPGDSGV------DQLVEIIKVLGTPTRE 279

>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta. Length = 352

Iteration: 1
 Score = 44.7 bits (104), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 34/103 (33%), Positives = 51/103 (49%), Gaps = 10/103 (9%)
Query: 33  KPERCLDGIDMRC-KVVDFGNACRA--NKQFAEEIQTRQYRAPEVILRAG-YSFSVDMWS 88
           KP+  L   D    K+ DFG+A +    +     I +R YRAPE+I  A  Y+ S+D+WS
Sbjct: 149 KPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWS 208
Query: 89  FACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRK 131
             C   EL  G  +F   SG       D L  +++++G   R+
Sbjct: 209 AGCVLAELLLGQPIFPGDSGV------DQLVEIIKVLGTPTRE 245

>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp Length = 422

Iteration: 1
 Score = 44.7 bits (104), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 34/103 (33%), Positives = 51/103 (49%), Gaps = 10/103 (9%)
Query: 33  KPERCLDGIDMRC-KVVDFGNACRA--NKQFAEEIQTRQYRAPEVILRAG-YSFSVDMWS 88
           KP+  L   D    K+ DFG+A +    +     I +R YRAPE+I  A  Y+ S+D+WS
Sbjct: 185 KPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWS 244
Query: 89  FACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRK 131
             C   EL  G  +F   SG       D L  +++++G   R+
Sbjct: 245 AGCVLAELLLGQPIFPGDSGV------DQLVEIIKVLGTPTRE 281

>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In Complex With A Ruthenium Octasporine Ligand (Osv) Length = 285

Iteration: 1
 Score = 44.7 bits (104), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 43/184 (23%), Positives = 68/184 (36%), Gaps = 55/184 (29%)
Query: 31  LPKPERCLDGIDMRCKVVDFGNACRAN--KQFAEEIQTRQYRAPEVILRAGYSFSVDMWS 88
           +PKP         R K++DFG A + +   +F     T ++ APE++         DMWS
Sbjct: 152 VPKP---------RIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWS 202
Query: 89  FACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGD 148
                + L +G   F                                           GD
Sbjct: 203 IGVITYILLSGASPFL------------------------------------------GD 220
Query: 149 LKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLR 208
            K+       +++    D+Y FS T A    +F+  LL   P+KR T Q  LQHPW+  +
Sbjct: 221 TKQETLANVSAVNYEFEDEY-FSNTSALA-KDFIRRLLVKDPKKRMTIQDSLQHPWIKPK 278
Query: 209 NSTR 212
           ++ +
Sbjct: 279 DTQQ 282

>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of Camp-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 44.7 bits (104), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 24/67 (35%), Positives = 33/67 (49%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACT 92
           KPE  L       +V DFG A R   +      T +  APE+IL  GY+ +VD W+    
Sbjct: 168 KPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEALAPEIILSKGYNKAVDWWALGVL 227
Query: 93  AFELATG 99
            +E+A G
Sbjct: 228 IYEMAAG 234

>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A Pentacyclic Inhibitor Length = 268

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 46/179 (25%), Positives = 69/179 (38%), Gaps = 49/179 (27%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRA-NKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFAC 91
           KPE  L G     K+ DFG +  A + + A    T  Y  PE+I    +   VD+WS   
Sbjct: 135 KPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGV 194
Query: 92  TAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKR 151
             +E                            L+GK P        ++  Y D +   KR
Sbjct: 195 LCYEF---------------------------LVGKPP-------FEANTYQDTY---KR 217
Query: 152 IRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNS 210
           I R++F   D        F    AR+    +  LL   P +RP  ++ L+HPW++  +S
Sbjct: 218 ISRVEFTFPD--------FVTEGARDL---ISRLLKHNPSQRPMLREVLEHPWITANSS 265

>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine Length = 295

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 43/184 (23%), Positives = 68/184 (36%), Gaps = 55/184 (29%)
Query: 31  LPKPERCLDGIDMRCKVVDFGNACRAN--KQFAEEIQTRQYRAPEVILRAGYSFSVDMWS 88
           +PKP         R K++DFG A + +   +F     T ++ APE++         DMWS
Sbjct: 152 VPKP---------RIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWS 202
Query: 89  FACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGD 148
                + L +G   F                                           GD
Sbjct: 203 IGVITYILLSGASPFL------------------------------------------GD 220
Query: 149 LKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLR 208
            K+       +++    D+Y FS T A    +F+  LL   P+KR T Q  LQHPW+  +
Sbjct: 221 TKQETLANVSAVNYEFEDEY-FSNTSALA-KDFIRRLLVKDPKKRMTIQDSLQHPWIKPK 278
Query: 209 NSTR 212
           ++ +
Sbjct: 279 DTQQ 282

>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein Kinase Domain Length = 387

Iteration: 1
 Score = 44.3 bits (103), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 41/169 (24%), Positives = 65/169 (38%), Gaps = 46/169 (27%)
Query: 45  CKVVDFGNACRANKQFAEEIQTR--QYRAPEVILRAGYSFSVDMWSFACTAFELATGDML 102
            K++DFG A + N     ++ T   ++ APE++ R    F  DMW+     + L +G   
Sbjct: 190 VKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSG--- 246
Query: 103 FAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDR 162
            +P +G      ED L                              L+ ++R   W  D 
Sbjct: 247 LSPFAG------EDDLET----------------------------LQNVKRCD-WEFDE 271
Query: 163 LLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNST 211
              D +     +A+   +F+  LL   P KR T    L+HPWL   +S 
Sbjct: 272 ---DAFSSVSPEAK---DFIKNLLQKEPRKRLTVHDALEHPWLKGDHSN 314

>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic Domain Of Death-Associated Protein Kinase With Atp Analogue And Mn. Length = 294

Iteration: 1
 Score = 44.3 bits (103), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 43/184 (23%), Positives = 68/184 (36%), Gaps = 55/184 (29%)
Query: 31  LPKPERCLDGIDMRCKVVDFGNACRAN--KQFAEEIQTRQYRAPEVILRAGYSFSVDMWS 88
           +PKP         R K++DFG A + +   +F     T ++ APE++         DMWS
Sbjct: 151 VPKP---------RIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWS 201
Query: 89  FACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGD 148
                + L +G   F                                           GD
Sbjct: 202 IGVITYILLSGASPFL------------------------------------------GD 219
Query: 149 LKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLR 208
            K+       +++    D+Y FS T A    +F+  LL   P+KR T Q  LQHPW+  +
Sbjct: 220 TKQETLANVSAVNYEFEDEY-FSNTSALA-KDFIRRLLVKDPKKRMTIQDSLQHPWIKPK 277
Query: 209 NSTR 212
           ++ +
Sbjct: 278 DTQQ 281

>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The Death Associated Protein Kinase Catalytic Domain With Amppnp Length = 295

Iteration: 1
 Score = 44.3 bits (103), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 43/184 (23%), Positives = 68/184 (36%), Gaps = 55/184 (29%)
Query: 31  LPKPERCLDGIDMRCKVVDFGNACRAN--KQFAEEIQTRQYRAPEVILRAGYSFSVDMWS 88
           +PKP         R K++DFG A + +   +F     T ++ APE++         DMWS
Sbjct: 152 VPKP---------RIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWS 202
Query: 89  FACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGD 148
                + L +G   F                                           GD
Sbjct: 203 IGVITYILLSGASPFL------------------------------------------GD 220
Query: 149 LKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLR 208
            K+       +++    D+Y FS T A    +F+  LL   P+KR T Q  LQHPW+  +
Sbjct: 221 TKQETLANVSAVNYEFEDEY-FSNTSALA-KDFIRRLLVKDPKKRMTIQDSLQHPWIKPK 278
Query: 209 NSTR 212
           ++ +
Sbjct: 279 DTQQ 282

>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase In Complex With Amppnp And Mg2+ Length = 295

Iteration: 1
 Score = 44.3 bits (103), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 43/184 (23%), Positives = 68/184 (36%), Gaps = 55/184 (29%)
Query: 31  LPKPERCLDGIDMRCKVVDFGNACRAN--KQFAEEIQTRQYRAPEVILRAGYSFSVDMWS 88
           +PKP         R K++DFG A + +   +F     T ++ APE++         DMWS
Sbjct: 152 VPKP---------RIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWS 202
Query: 89  FACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGD 148
                + L +G   F                                           GD
Sbjct: 203 IGVITYILLSGASPFL------------------------------------------GD 220
Query: 149 LKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLR 208
            K+       +++    D+Y FS T A    +F+  LL   P+KR T Q  LQHPW+  +
Sbjct: 221 TKQETLANVSAVNYEFEDEY-FSNTSALA-KDFIRRLLVKDPKKRMTIQDSLQHPWIKPK 278
Query: 209 NSTR 212
           ++ +
Sbjct: 279 DTQQ 282

>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp Length = 295

Iteration: 1
 Score = 44.3 bits (103), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 43/184 (23%), Positives = 68/184 (36%), Gaps = 55/184 (29%)
Query: 31  LPKPERCLDGIDMRCKVVDFGNACRAN--KQFAEEIQTRQYRAPEVILRAGYSFSVDMWS 88
           +PKP         R K++DFG A + +   +F     T ++ APE++         DMWS
Sbjct: 152 VPKP---------RIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWS 202
Query: 89  FACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGD 148
                + L +G   F                                           GD
Sbjct: 203 IGVITYILLSGASPFL------------------------------------------GD 220
Query: 149 LKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLR 208
            K+       +++    D+Y FS T A    +F+  LL   P+KR T Q  LQHPW+  +
Sbjct: 221 TKQETLANVSAVNYEFEDEY-FSNTSALA-KDFIRRLLVKDPKKRMTIQDSLQHPWIKPK 278
Query: 209 NSTR 212
           ++ +
Sbjct: 279 DTQQ 282

>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With Bound Inhibitor Fragment Length = 293

Iteration: 1
 Score = 44.3 bits (103), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 43/184 (23%), Positives = 68/184 (36%), Gaps = 55/184 (29%)
Query: 31  LPKPERCLDGIDMRCKVVDFGNACRAN--KQFAEEIQTRQYRAPEVILRAGYSFSVDMWS 88
           +PKP         R K++DFG A + +   +F     T ++ APE++         DMWS
Sbjct: 151 VPKP---------RIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWS 201
Query: 89  FACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGD 148
                + L +G   F                                           GD
Sbjct: 202 IGVITYILLSGASPFL------------------------------------------GD 219
Query: 149 LKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLR 208
            K+       +++    D+Y FS T A    +F+  LL   P+KR T Q  LQHPW+  +
Sbjct: 220 TKQETLANVSAVNYEFEDEY-FSNTSALA-KDFIRRLLVKDPKKRMTIQDSLQHPWIKPK 277
Query: 209 NSTR 212
           ++ +
Sbjct: 278 DTQQ 281

>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7 Length = 346

Iteration: 1
 Score = 44.3 bits (103), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 25/68 (36%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
Query: 33  KPERCLDGIDMRCKVVDFGNA---CRANKQFAEEIQTRQYRAPEVILRA-GYSFSVDMWS 88
           KP   L   +   K+ DFG A      N+ +  ++ TR YRAPE++  A  Y   VDMW+
Sbjct: 139 KPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVVTRWYRAPELLFGARMYGVGVDMWA 198
Query: 89  FACTAFEL 96
             C   EL
Sbjct: 199 VGCILAEL 206

>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277 Length = 277

Iteration: 1
 Score = 44.3 bits (103), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 43/177 (24%), Positives = 64/177 (36%), Gaps = 55/177 (31%)
Query: 31  LPKPERCLDGIDMRCKVVDFGNACRAN--KQFAEEIQTRQYRAPEVILRAGYSFSVDMWS 88
           +PKP         R K++DFG A + +   +F     T ++ APE++         DMWS
Sbjct: 152 VPKP---------RIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWS 202
Query: 89  FACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGD 148
                + L +G   F                                           GD
Sbjct: 203 IGVITYILLSGASPFL------------------------------------------GD 220
Query: 149 LKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 205
            K+       +++    D+Y FS T A    +F+  LL   P+KR T Q  LQHPW+
Sbjct: 221 TKQETLANVSAVNYEFEDEY-FSNTSALA-KDFIRRLLVKDPKKRMTIQDSLQHPWI 275

>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In Complex With Small Molecular Inhibitors Length = 278

Iteration: 1
 Score = 44.3 bits (103), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 43/177 (24%), Positives = 64/177 (36%), Gaps = 55/177 (31%)
Query: 31  LPKPERCLDGIDMRCKVVDFGNACRAN--KQFAEEIQTRQYRAPEVILRAGYSFSVDMWS 88
           +PKP         R K++DFG A + +   +F     T ++ APE++         DMWS
Sbjct: 152 VPKP---------RIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWS 202
Query: 89  FACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGD 148
                + L +G   F                                           GD
Sbjct: 203 IGVITYILLSGASPFL------------------------------------------GD 220
Query: 149 LKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 205
            K+       +++    D+Y FS T A    +F+  LL   P+KR T Q  LQHPW+
Sbjct: 221 TKQETLANVSAVNYEFEDEY-FSNTSALA-KDFIRRLLVKDPKKRMTIQDSLQHPWI 275

>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a Length = 282

Iteration: 1
 Score = 44.3 bits (103), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 46/192 (23%), Positives = 72/192 (37%), Gaps = 49/192 (25%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEI-QTRQYRAPEVILRAGYSFSVDMWSFAC 91
           KPE  L G     K+ +FG +  A       +  T  Y  PE+I    +   VD+WS   
Sbjct: 137 KPENLLLGSAGELKIANFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 196
Query: 92  TAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKR 151
             +E                            L+GK P        ++  Y + +   KR
Sbjct: 197 LCYEF---------------------------LVGKPP-------FEANTYQETY---KR 219
Query: 152 IRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNST 211
           I R++F   D        F    AR+    +  LL   P +RP  ++ L+HPW++  +S 
Sbjct: 220 ISRVEFTFPD--------FVTEGARDL---ISRLLKHNPSQRPMLREVLEHPWITANSSK 268
Query: 212 RDETKNKSNVEK 223
               +NK +  K
Sbjct: 269 PSNCQNKESASK 280

>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant Length = 334

Iteration: 1
 Score = 43.9 bits (102), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 45/193 (23%), Positives = 71/193 (36%), Gaps = 55/193 (28%)
Query: 31  LPKPERCLDGIDMRCKVVDFGNACRAN--KQFAEEIQTRQYRAPEVILRAGYSFSVDMWS 88
           +PKP         R K++DFG A + +   +F     T  + APE++         DMWS
Sbjct: 152 VPKP---------RIKIIDFGLAHKIDFGNEFKNIFGTPAFVAPEIVNYEPLGLEADMWS 202
Query: 89  FACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGD 148
                + L +G   F                                           GD
Sbjct: 203 IGVITYILLSGASPFL------------------------------------------GD 220
Query: 149 LKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLR 208
            K+       +++    D+Y FS T A    +F+  LL   P+KR T Q  LQHPW+  +
Sbjct: 221 TKQETLANVSAVNYEFEDEY-FSNTSALA-KDFIRRLLVKDPKKRMTIQDSLQHPWIKPK 278
Query: 209 NSTRDETKNKSNV 221
           ++ +  ++  S V
Sbjct: 279 DTQQALSRKASAV 291

>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5 Length = 317

Iteration: 1
 Score = 43.9 bits (102), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 43/169 (25%), Positives = 66/169 (39%), Gaps = 48/169 (28%)
Query: 42  DMRCKVVDFGNACRANKQFAEE---IQTRQYRAPEVILRAGYSFSVDMWSFACTAFELAT 98
           D R K+ DFG   + +K+  +    + T  + APEVI R  Y   VD+WS      E+  
Sbjct: 177 DGRIKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMID 236
Query: 99  GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFW 158
           G+  +          +E  L  M  +   +P ++               DL ++  +   
Sbjct: 237 GEPPYF---------NEPPLQAMRRIRDSLPPRVK--------------DLHKVSSVLRG 273
Query: 159 SLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSL 207
            LD +LV          RE            P +R TAQ+ L HP+L L
Sbjct: 274 FLDLMLV----------RE------------PSQRATAQELLGHPFLKL 300

>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric Activator Ps171 Bound To The Pif-Pocket Length = 311

Iteration: 1
 Score = 43.9 bits (102), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 24/76 (31%), Positives = 34/76 (44%), Gaps = 13/76 (17%)
Query: 33  KPERCLDGIDMRCKVVDFGNA---------CRANKQFAEEIQTRQYRAPEVILRAGYSFS 83
           KPE  L   DM  ++ DFG A          RAN      + T QY +PE++       S
Sbjct: 159 KPENILLNEDMHIQITDFGTAKVLSPESKQARANXF----VGTAQYVSPELLTEKSAXKS 214
Query: 84  VDMWSFACTAFELATG 99
            D+W+  C  ++L  G
Sbjct: 215 SDLWALGCIIYQLVAG 230

>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase Kinase 5 Length = 295

Iteration: 1
 Score = 43.5 bits (101), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 25/63 (39%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
Query: 46  KVVDFGNACR---ANKQFAEEIQTRQYRAPEVILRA--GYSFSVDMWSFACTAFELATGD 100
           K+ DFG + R    N        T QY APE+I +   GY  + D+WS  CT  E+ATG 
Sbjct: 163 KISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGK 222
Query: 101 MLF 103
             F
Sbjct: 223 PPF 225

>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point Mutations (K299r, T423e) Length = 297

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFA---EEIQTRQYRAPEVILRAGYSFSVDMWSF 89
           K +  L G+D   K+ DFG   +   + +   E + T  + APEV+ R  Y   VD+WS 
Sbjct: 143 KSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMVGTPYWMAPEVVTRKAYGPKVDIWSL 202
Query: 90  ACTAFELATGD 100
              A E+  G+
Sbjct: 203 GIMAIEMIEGE 213

>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating Kinase 1 (Ask1) With Imidazopyridine Inhibitor Length = 269

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/63 (39%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
Query: 46  KVVDFGNACR---ANKQFAEEIQTRQYRAPEVILRA--GYSFSVDMWSFACTAFELATGD 100
           K+ DFG + R    N        T QY APE+I +   GY  + D+WS  CT  E+ATG 
Sbjct: 149 KISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGK 208
Query: 101 MLF 103
             F
Sbjct: 209 PPF 211

>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7 Length = 311

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 24/76 (31%), Positives = 34/76 (44%), Gaps = 13/76 (17%)
Query: 33  KPERCLDGIDMRCKVVDFGNA---------CRANKQFAEEIQTRQYRAPEVILRAGYSFS 83
           KPE  L   DM  ++ DFG A          RAN      + T QY +PE++       S
Sbjct: 156 KPENILLNEDMHIQITDFGTAKVLSPESKQARANSF----VGTAQYVSPELLTEKSACKS 211
Query: 84  VDMWSFACTAFELATG 99
            D+W+  C  ++L  G
Sbjct: 212 SDLWALGCIIYQLVAG 227

>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent Kinase- 1 (Pdk-1)catalytic Domain Bound To A Dibenzonaphthyridine Inhibitor Length = 312

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 24/76 (31%), Positives = 34/76 (44%), Gaps = 13/76 (17%)
Query: 33  KPERCLDGIDMRCKVVDFGNA---------CRANKQFAEEIQTRQYRAPEVILRAGYSFS 83
           KPE  L   DM  ++ DFG A          RAN      + T QY +PE++       S
Sbjct: 160 KPENILLNEDMHIQITDFGTAKVLSPESKQARANSF----VGTAQYVSPELLTEKSACKS 215
Query: 84  VDMWSFACTAFELATG 99
            D+W+  C  ++L  G
Sbjct: 216 SDLWALGCIIYQLVAG 231

>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of Pyrazolopyridine- Sulfonamides As Potent Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I) Length = 271

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 44/179 (24%), Positives = 69/179 (38%), Gaps = 49/179 (27%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEI-QTRQYRAPEVILRAGYSFSVDMWSFAC 91
           KPE  L G     K+ DFG +  A     +++  T  Y  PE+I    +   VD+WS   
Sbjct: 138 KPENLLLGSAGELKIADFGWSVHAPSSRRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 197
Query: 92  TAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKR 151
             +E                            L+GK P        ++  Y + +   KR
Sbjct: 198 LCYEF---------------------------LVGKPP-------FEANTYQETY---KR 220
Query: 152 IRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNS 210
           I R++F   D        F    AR   + +  LL   P +RP  ++ L+HPW++  +S
Sbjct: 221 ISRVEFTFPD--------FVTEGAR---DLISRLLKHNPSQRPMLREVLEHPWITANSS 268

>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead Compound Length = 292

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 24/76 (31%), Positives = 34/76 (44%), Gaps = 13/76 (17%)
Query: 33  KPERCLDGIDMRCKVVDFGNA---------CRANKQFAEEIQTRQYRAPEVILRAGYSFS 83
           KPE  L   DM  ++ DFG A          RAN      + T QY +PE++       S
Sbjct: 141 KPENILLNEDMHIQITDFGTAKVLSPESKQARANXF----VGTAQYVSPELLTEKSACKS 196
Query: 84  VDMWSFACTAFELATG 99
            D+W+  C  ++L  G
Sbjct: 197 SDLWALGCIIYQLVAG 212

>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3- Phosphoinositide Dependent Kinase (Pdk1) Length = 311

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 24/76 (31%), Positives = 34/76 (44%), Gaps = 13/76 (17%)
Query: 33  KPERCLDGIDMRCKVVDFGNA---------CRANKQFAEEIQTRQYRAPEVILRAGYSFS 83
           KPE  L   DM  ++ DFG A          RAN      + T QY +PE++       S
Sbjct: 159 KPENILLNEDMHIQITDFGTAKVLSPESKQARANXF----VGTAQYVSPELLTEKSACKS 214
Query: 84  VDMWSFACTAFELATG 99
            D+W+  C  ++L  G
Sbjct: 215 SDLWALGCIIYQLVAG 230

>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i Length = 312

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 24/76 (31%), Positives = 34/76 (44%), Gaps = 13/76 (17%)
Query: 33  KPERCLDGIDMRCKVVDFGNA---------CRANKQFAEEIQTRQYRAPEVILRAGYSFS 83
           KPE  L   DM  ++ DFG A          RAN      + T QY +PE++       S
Sbjct: 160 KPENILLNEDMHIQITDFGTAKVLSPESKQARANXF----VGTAQYVSPELLTEKSACKS 215
Query: 84  VDMWSFACTAFELATG 99
            D+W+  C  ++L  G
Sbjct: 216 SDLWALGCIIYQLVAG 231

>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6 Length = 311

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 24/76 (31%), Positives = 34/76 (44%), Gaps = 13/76 (17%)
Query: 33  KPERCLDGIDMRCKVVDFGNA---------CRANKQFAEEIQTRQYRAPEVILRAGYSFS 83
           KPE  L   DM  ++ DFG A          RAN      + T QY +PE++       S
Sbjct: 156 KPENILLNEDMHIQITDFGTAKVLSPESKQARANXF----VGTAQYVSPELLTEKSACKS 211
Query: 84  VDMWSFACTAFELATG 99
            D+W+  C  ++L  G
Sbjct: 212 SDLWALGCIIYQLVAG 227

>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain In Complex With Atp Length = 311

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 24/76 (31%), Positives = 34/76 (44%), Gaps = 13/76 (17%)
Query: 33  KPERCLDGIDMRCKVVDFGNA---------CRANKQFAEEIQTRQYRAPEVILRAGYSFS 83
           KPE  L   DM  ++ DFG A          RAN      + T QY +PE++       S
Sbjct: 159 KPENILLNEDMHIQITDFGTAKVLSPESKQARANXF----VGTAQYVSPELLTEKSACKS 214
Query: 84  VDMWSFACTAFELATG 99
            D+W+  C  ++L  G
Sbjct: 215 SDLWALGCIIYQLVAG 230

>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Ly333531 Length = 310

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 24/76 (31%), Positives = 34/76 (44%), Gaps = 13/76 (17%)
Query: 33  KPERCLDGIDMRCKVVDFGNA---------CRANKQFAEEIQTRQYRAPEVILRAGYSFS 83
           KPE  L   DM  ++ DFG A          RAN      + T QY +PE++       S
Sbjct: 157 KPENILLNEDMHIQITDFGTAKVLSPESKQARANXF----VGTAQYVSPELLTEKSACKS 212
Query: 84  VDMWSFACTAFELATG 99
            D+W+  C  ++L  G
Sbjct: 213 SDLWALGCIIYQLVAG 228

>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through Fragment-Based Lead Discovery Length = 311

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 24/76 (31%), Positives = 34/76 (44%), Gaps = 13/76 (17%)
Query: 33  KPERCLDGIDMRCKVVDFGNA---------CRANKQFAEEIQTRQYRAPEVILRAGYSFS 83
           KPE  L   DM  ++ DFG A          RAN      + T QY +PE++       S
Sbjct: 159 KPENILLNEDMHIQITDFGTAKVLSPESKQARANXF----VGTAQYVSPELLTEKSACKS 214
Query: 84  VDMWSFACTAFELATG 99
            D+W+  C  ++L  G
Sbjct: 215 SDLWALGCIIYQLVAG 230

>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 24/76 (31%), Positives = 34/76 (44%), Gaps = 13/76 (17%)
Query: 33  KPERCLDGIDMRCKVVDFGNA---------CRANKQFAEEIQTRQYRAPEVILRAGYSFS 83
           KPE  L   DM  ++ DFG A          RAN      + T QY +PE++       S
Sbjct: 157 KPENILLNEDMHIQITDFGTAKVLSPESKQARANXF----VGTAQYVSPELLTEKSACKS 212
Query: 84  VDMWSFACTAFELATG 99
            D+W+  C  ++L  G
Sbjct: 213 SDLWALGCIIYQLVAG 228

>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In Complex With Compound 9 Length = 311

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 24/76 (31%), Positives = 34/76 (44%), Gaps = 13/76 (17%)
Query: 33  KPERCLDGIDMRCKVVDFGNA---------CRANKQFAEEIQTRQYRAPEVILRAGYSFS 83
           KPE  L   DM  ++ DFG A          RAN      + T QY +PE++       S
Sbjct: 159 KPENILLNEDMHIQITDFGTAKVLSPESKQARANXF----VGTAQYVSPELLTEKSACKS 214
Query: 84  VDMWSFACTAFELATG 99
            D+W+  C  ++L  G
Sbjct: 215 SDLWALGCIIYQLVAG 230

>pdb|1Z5M|A Chain A, Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl) Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2- Dimethylpropanediamide Complexed With Human Pdk1 Length = 286

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 24/76 (31%), Positives = 34/76 (44%), Gaps = 13/76 (17%)
Query: 33  KPERCLDGIDMRCKVVDFGNA---------CRANKQFAEEIQTRQYRAPEVILRAGYSFS 83
           KPE  L   DM  ++ DFG A          RAN      + T QY +PE++       S
Sbjct: 134 KPENILLNEDMHIQITDFGTAKVLSPESKQARANXF----VGTAQYVSPELLTEKSACKS 189
Query: 84  VDMWSFACTAFELATG 99
            D+W+  C  ++L  G
Sbjct: 190 SDLWALGCIIYQLVAG 205

>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 24/76 (31%), Positives = 34/76 (44%), Gaps = 13/76 (17%)
Query: 33  KPERCLDGIDMRCKVVDFGNA---------CRANKQFAEEIQTRQYRAPEVILRAGYSFS 83
           KPE  L   DM  ++ DFG A          RAN      + T QY +PE++       S
Sbjct: 157 KPENILLNEDMHIQITDFGTAKVLSPESKQARANXF----VGTAQYVSPELLTEKSACKS 212
Query: 84  VDMWSFACTAFELATG 99
            D+W+  C  ++L  G
Sbjct: 213 SDLWALGCIIYQLVAG 228

>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain Length = 310

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 24/76 (31%), Positives = 34/76 (44%), Gaps = 13/76 (17%)
Query: 33  KPERCLDGIDMRCKVVDFGNA---------CRANKQFAEEIQTRQYRAPEVILRAGYSFS 83
           KPE  L   DM  ++ DFG A          RAN      + T QY +PE++       S
Sbjct: 157 KPENILLNEDMHIQITDFGTAKVLSPESKQARANAF----VGTAQYVSPELLTEKSACKS 212
Query: 84  VDMWSFACTAFELATG 99
            D+W+  C  ++L  G
Sbjct: 213 SDLWALGCIIYQLVAG 228

>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1 Catalytic Domain Length = 289

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 24/76 (31%), Positives = 34/76 (44%), Gaps = 13/76 (17%)
Query: 33  KPERCLDGIDMRCKVVDFGNA---------CRANKQFAEEIQTRQYRAPEVILRAGYSFS 83
           KPE  L   DM  ++ DFG A          RAN      + T QY +PE++       S
Sbjct: 137 KPENILLNEDMHIQITDFGTAKVLSPESKQARANXF----VGTAQYVSPELLTEKSACKS 192
Query: 84  VDMWSFACTAFELATG 99
            D+W+  C  ++L  G
Sbjct: 193 SDLWALGCIIYQLVAG 208

>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8 Length = 286

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 24/76 (31%), Positives = 34/76 (44%), Gaps = 13/76 (17%)
Query: 33  KPERCLDGIDMRCKVVDFGNA---------CRANKQFAEEIQTRQYRAPEVILRAGYSFS 83
           KPE  L   DM  ++ DFG A          RAN      + T QY +PE++       S
Sbjct: 135 KPENILLNEDMHIQITDFGTAKVLSPESKQARANXF----VGTAQYVSPELLTEKSACKS 190
Query: 84  VDMWSFACTAFELATG 99
            D+W+  C  ++L  G
Sbjct: 191 SDLWALGCIIYQLVAG 206

>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Bim-3 Length = 286

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 24/76 (31%), Positives = 34/76 (44%), Gaps = 13/76 (17%)
Query: 33  KPERCLDGIDMRCKVVDFGNA---------CRANKQFAEEIQTRQYRAPEVILRAGYSFS 83
           KPE  L   DM  ++ DFG A          RAN      + T QY +PE++       S
Sbjct: 136 KPENILLNEDMHIQITDFGTAKVLSPESKQARANXF----VGTAQYVSPELLTEKSACKS 191
Query: 84  VDMWSFACTAFELATG 99
            D+W+  C  ++L  G
Sbjct: 192 SDLWALGCIIYQLVAG 207

>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length = 314

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 24/76 (31%), Positives = 34/76 (44%), Gaps = 13/76 (17%)
Query: 33  KPERCLDGIDMRCKVVDFGNA---------CRANKQFAEEIQTRQYRAPEVILRAGYSFS 83
           KPE  L   DM  ++ DFG A          RAN      + T QY +PE++       S
Sbjct: 162 KPENILLNEDMHIQITDFGTAKVLSPESKQARANXF----VGTAQYVSPELLTEKSACKS 217
Query: 84  VDMWSFACTAFELATG 99
            D+W+  C  ++L  G
Sbjct: 218 SDLWALGCIIYQLVAG 233

>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a Resolution. Length = 352

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/72 (36%), Positives = 35/72 (48%), Gaps = 8/72 (11%)
Query: 42  DMRCKVVDFGNACRAN----KQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELA 97
           D   K+ DFG  C+ N     +  E   T  Y APE++L   Y+ SVD WSF    +E+ 
Sbjct: 155 DGHIKIADFG-MCKENMLGDAKTNEFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEML 213
Query: 98  TGDMLFAPKSGQ 109
            G    +P  GQ
Sbjct: 214 IGQ---SPFHGQ 222

>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor 1f8 Length = 316

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/76 (31%), Positives = 34/76 (44%), Gaps = 13/76 (17%)
Query: 33  KPERCLDGIDMRCKVVDFGNA---------CRANKQFAEEIQTRQYRAPEVILRAGYSFS 83
           KPE  L   DM  ++ DFG A          RAN      + T QY +PE++       S
Sbjct: 164 KPENILLNEDMHIQITDFGTAKVLSPESKQARANXF----VGTAQYVSPELLTEKSACKS 219
Query: 84  VDMWSFACTAFELATG 99
            D+W+  C  ++L  G
Sbjct: 220 SDLWALGCIIYQLVAG 235

>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine Length = 268

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 45/179 (25%), Positives = 69/179 (38%), Gaps = 49/179 (27%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRA-NKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFAC 91
           KPE  L G     K+ DFG +  A + + A    T  Y  PE+I    +   VD+WS   
Sbjct: 135 KPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGV 194
Query: 92  TAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKR 151
             +E                            L+GK P        ++  Y + +   KR
Sbjct: 195 LCYEF---------------------------LVGKPP-------FEANTYQETY---KR 217
Query: 152 IRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNS 210
           I R++F   D        F    AR   + +  LL   P +RP  ++ L+HPW++  +S
Sbjct: 218 ISRVEFTFPD--------FVTEGAR---DLISRLLKHNPSQRPMLREVLEHPWITANSS 265

>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate Peptide And Inhibitor Length = 342

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 47/184 (25%), Positives = 78/184 (42%), Gaps = 32/184 (17%)
Query: 42  DMRCKVVDFGNACRANKQFAEEIQ----TRQYRAPEVILRAGYSFSVDMWSFACTAFELA 97
           D   K+ DFG  C+   +    ++    T +Y APEV+    Y  +VD W      +E+ 
Sbjct: 147 DGHIKITDFG-LCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 205
Query: 98  TGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIA------IGGAQSKDYFDRHG---- 147
            G + F  +  +   E    L LM E+  + PR +       + G   KD   R G    
Sbjct: 206 CGRLPFYNQDHEKLFE----LILMEEI--RFPRTLGPEAKSLLSGLLKKDPKQRLGGGSE 259
Query: 148 DLKRIRRLKFWS-------LDRLLVDKYR---FSETDAREF-AEFLVPLLDFTPEKRPTA 196
           D K I + +F++        ++ L   ++    SETD R F  EF   ++  TP  +  +
Sbjct: 260 DAKEIMQHRFFAGIVWQHVYEKKLSPPFKPQVTSETDTRYFDEEFTAQMITITPPDQDDS 319
Query: 197 QQCL 200
            +C+
Sbjct: 320 MECV 323

>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor Length = 341

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 47/184 (25%), Positives = 78/184 (42%), Gaps = 32/184 (17%)
Query: 42  DMRCKVVDFGNACRANKQFAEEIQ----TRQYRAPEVILRAGYSFSVDMWSFACTAFELA 97
           D   K+ DFG  C+   +    ++    T +Y APEV+    Y  +VD W      +E+ 
Sbjct: 146 DGHIKITDFG-LCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 204
Query: 98  TGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIA------IGGAQSKDYFDRHG---- 147
            G + F  +  +   E    L LM E+  + PR +       + G   KD   R G    
Sbjct: 205 CGRLPFYNQDHEKLFE----LILMEEI--RFPRTLGPEAKSLLSGLLKKDPKQRLGGGSE 258
Query: 148 DLKRIRRLKFWS-------LDRLLVDKYR---FSETDAREF-AEFLVPLLDFTPEKRPTA 196
           D K I + +F++        ++ L   ++    SETD R F  EF   ++  TP  +  +
Sbjct: 259 DAKEIMQHRFFAGIVWQHVYEKKLSPPFKPQVTSETDTRYFDEEFTAQMITITPPDQDDS 318
Query: 197 QQCL 200
            +C+
Sbjct: 319 MECV 322

>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363 Length = 340

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 47/184 (25%), Positives = 78/184 (42%), Gaps = 32/184 (17%)
Query: 42  DMRCKVVDFGNACRANKQFAEEIQ----TRQYRAPEVILRAGYSFSVDMWSFACTAFELA 97
           D   K+ DFG  C+   +    ++    T +Y APEV+    Y  +VD W      +E+ 
Sbjct: 145 DGHIKITDFG-LCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 203
Query: 98  TGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIA------IGGAQSKDYFDRHG---- 147
            G + F  +  +   E    L LM E+  + PR +       + G   KD   R G    
Sbjct: 204 CGRLPFYNQDHEKLFE----LILMEEI--RFPRTLGPEAKSLLSGLLKKDPKQRLGGGSE 257
Query: 148 DLKRIRRLKFWS-------LDRLLVDKYR---FSETDAREF-AEFLVPLLDFTPEKRPTA 196
           D K I + +F++        ++ L   ++    SETD R F  EF   ++  TP  +  +
Sbjct: 258 DAKEIMQHRFFAGIVWQHVYEKKLSPPFKPQVTSETDTRYFDEEFTAQMITITPPDQDDS 317
Query: 197 QQCL 200
            +C+
Sbjct: 318 MECV 321

>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6 Length = 321

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEE---IQTRQYRAPEVILRAGYSFSVDMWSF 89
           K +  L  +D R K+ DFG   + +K   +    + T  + APEVI R+ Y+  VD+WS 
Sbjct: 168 KSDSILLTLDGRVKLSDFGFCAQISKDVPKRKXLVGTPYWMAPEVISRSLYATEVDIWSL 227
Query: 90  ACTAFELATGD 100
                E+  G+
Sbjct: 228 GIMVIEMVDGE 238

>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase 1) Length = 294

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 45  CKVVDFGNACR-ANKQFAEE--IQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGD 100
            K+ DFG A +  + Q      + T  + APEVI ++ Y F  D+WS   TA ELA G+
Sbjct: 155 VKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGE 213

>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEE---IQTRQYRAPEVILRAGYSFSVDMWSF 89
           K +  L G+D   K+ DFG   +   + ++    + T  + APEV+ R  Y   VD+WS 
Sbjct: 144 KSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSL 203
Query: 90  ACTAFELATGD 100
              A E+  G+
Sbjct: 204 GIMAIEMIEGE 214

>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEE---IQTRQYRAPEVILRAGYSFSVDMWSF 89
           K +  L G+D   K+ DFG   +   + ++    + T  + APEV+ R  Y   VD+WS 
Sbjct: 144 KSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSL 203
Query: 90  ACTAFELATGD 100
              A E+  G+
Sbjct: 204 GIMAIEMIEGE 214

>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium Complex Lambda-Fl172 Length = 297

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEE---IQTRQYRAPEVILRAGYSFSVDMWSF 89
           K +  L G+D   K+ DFG   +   + ++    + T  + APEV+ R  Y   VD+WS 
Sbjct: 143 KSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSL 202
Query: 90  ACTAFELATGD 100
              A E+  G+
Sbjct: 203 GIMAIEMIEGE 213

>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1 Length = 297

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEE---IQTRQYRAPEVILRAGYSFSVDMWSF 89
           K +  L G+D   K+ DFG   +   + ++    + T  + APEV+ R  Y   VD+WS 
Sbjct: 143 KSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSL 202
Query: 90  ACTAFELATGD 100
              A E+  G+
Sbjct: 203 GIMAIEMIEGE 213

>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase Catalytic Subunit From Saccharomyces Cerevisiae Length = 318

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 23/67 (34%), Positives = 30/67 (44%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACT 92
           KPE  L   +   K+ DFG A            T  Y APEV+    Y+ S+D WSF   
Sbjct: 133 KPENILLDKNGHIKITDFGFAKYVPDVTYXLCGTPDYIAPEVVSTKPYNKSIDWWSFGIL 192
Query: 93  AFELATG 99
            +E+  G
Sbjct: 193 IYEMLAG 199

>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase 32a (Yank1) Length = 384

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/72 (36%), Positives = 33/72 (45%), Gaps = 5/72 (6%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANK--QFAEEIQTRQYRAPEVILR---AGYSFSVDMW 87
           KP+  L        + DF  A    +  Q      T+ Y APE+      AGYSF+VD W
Sbjct: 142 KPDNILLDEHGHVHITDFNIAAMLPRETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWW 201
Query: 88  SFACTAFELATG 99
           S   TA+EL  G
Sbjct: 202 SLGVTAYELLRG 213

>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase Length = 272

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 44/179 (24%), Positives = 67/179 (37%), Gaps = 49/179 (27%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEI-QTRQYRAPEVILRAGYSFSVDMWSFAC 91
           KPE  L G     K+ DFG +  A       +  T  Y  PE+I    +   VD+WS   
Sbjct: 139 KPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 198
Query: 92  TAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKR 151
             +E                            L+GK P        ++  Y + +   KR
Sbjct: 199 LCYEF---------------------------LVGKPP-------FEANTYQETY---KR 221
Query: 152 IRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNS 210
           I R++F   D        F    AR   + +  LL   P +RP  ++ L+HPW++  +S
Sbjct: 222 ISRVEFTFPD--------FVTEGAR---DLISRLLKHNPSQRPMLREVLEHPWITANSS 269

>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And Compound 10 Length = 268

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 44/179 (24%), Positives = 67/179 (37%), Gaps = 49/179 (27%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEI-QTRQYRAPEVILRAGYSFSVDMWSFAC 91
           KPE  L G     K+ DFG +  A       +  T  Y  PE+I    +   VD+WS   
Sbjct: 135 KPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 194
Query: 92  TAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKR 151
             +E                            L+GK P        ++  Y + +   KR
Sbjct: 195 LCYEF---------------------------LVGKPP-------FEANTYQETY---KR 217
Query: 152 IRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNS 210
           I R++F   D        F    AR   + +  LL   P +RP  ++ L+HPW++  +S
Sbjct: 218 ISRVEFTFPD--------FVTEGAR---DLISRLLKHNPSQRPMLREVLEHPWITANSS 265

>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-320 In Complex With Atp Length = 320

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 42/165 (25%), Positives = 68/165 (41%), Gaps = 45/165 (27%)
Query: 66  TRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELI 125
           T  Y APEV+ +  YS +VD WS    A+ L  G   + P     F ++ D  A + E I
Sbjct: 181 TPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG---YPP-----FYDEND--AKLFEQI 230
Query: 126 GKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPL 185
            K   +          Y+D   D  +                            +F+  L
Sbjct: 231 LKAEYEF------DSPYWDDISDSAK----------------------------DFIRHL 256
Query: 186 LDFTPEKRPTAQQCLQHPWLSLRNSTRDETKNKSNVEKVDVGMSK 230
           ++  PEKR T +Q LQHPW++  ++  D+  ++S  E++    +K
Sbjct: 257 MEKDPEKRFTCEQALQHPWIA-GDTALDKNIHQSVSEQIKKNFAK 300

>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And Tpx2 Length = 268

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 44/179 (24%), Positives = 67/179 (37%), Gaps = 49/179 (27%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEI-QTRQYRAPEVILRAGYSFSVDMWSFAC 91
           KPE  L G     K+ DFG +  A       +  T  Y  PE+I    +   VD+WS   
Sbjct: 135 KPENLLLGSAGELKIADFGWSVHAPSSRRTXLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 194
Query: 92  TAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKR 151
             +E                            L+GK P        ++  Y + +   KR
Sbjct: 195 LCYEF---------------------------LVGKPP-------FEANTYQETY---KR 217
Query: 152 IRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNS 210
           I R++F   D        F    AR   + +  LL   P +RP  ++ L+HPW++  +S
Sbjct: 218 ISRVEFTFPD--------FVTEGAR---DLISRLLKHNPSQRPMLREVLEHPWITANSS 265

>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-315 In Complex With Atp Length = 315

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 42/165 (25%), Positives = 68/165 (41%), Gaps = 45/165 (27%)
Query: 66  TRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELI 125
           T  Y APEV+ +  YS +VD WS    A+ L  G   + P     F ++ D  A + E I
Sbjct: 181 TPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG---YPP-----FYDEND--AKLFEQI 230
Query: 126 GKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPL 185
            K   +          Y+D   D  +                            +F+  L
Sbjct: 231 LKAEYEF------DSPYWDDISDSAK----------------------------DFIRHL 256
Query: 186 LDFTPEKRPTAQQCLQHPWLSLRNSTRDETKNKSNVEKVDVGMSK 230
           ++  PEKR T +Q LQHPW++  ++  D+  ++S  E++    +K
Sbjct: 257 MEKDPEKRFTCEQALQHPWIA-GDTALDKNIHQSVSEQIKKNFAK 300

>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 44/179 (24%), Positives = 67/179 (37%), Gaps = 49/179 (27%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEI-QTRQYRAPEVILRAGYSFSVDMWSFAC 91
           KPE  L G     K+ DFG +  A       +  T  Y  PE+I    +   VD+WS   
Sbjct: 138 KPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 197
Query: 92  TAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKR 151
             +E                            L+GK P        ++  Y + +   KR
Sbjct: 198 LCYEF---------------------------LVGKPP-------FEANTYQETY---KR 220
Query: 152 IRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNS 210
           I R++F   D        F    AR   + +  LL   P +RP  ++ L+HPW++  +S
Sbjct: 221 ISRVEFTFPD--------FVTEGAR---DLISRLLKHNPSQRPMLREVLEHPWITANSS 268

>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 44/179 (24%), Positives = 67/179 (37%), Gaps = 49/179 (27%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEI-QTRQYRAPEVILRAGYSFSVDMWSFAC 91
           KPE  L G     K+ DFG +  A       +  T  Y  PE+I    +   VD+WS   
Sbjct: 138 KPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 197
Query: 92  TAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKR 151
             +E                            L+GK P        ++  Y + +   KR
Sbjct: 198 LCYEF---------------------------LVGKPP-------FEANTYQETY---KR 220
Query: 152 IRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNS 210
           I R++F   D        F    AR   + +  LL   P +RP  ++ L+HPW++  +S
Sbjct: 221 ISRVEFTFPD--------FVTEGAR---DLISRLLKHNPSQRPMLREVLEHPWITANSS 268

>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat Length = 332

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 42/165 (25%), Positives = 68/165 (41%), Gaps = 45/165 (27%)
Query: 66  TRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELI 125
           T  Y APEV+ +  YS +VD WS    A+ L  G   + P     F ++ D  A + E I
Sbjct: 181 TPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG---YPP-----FYDEND--AKLFEQI 230
Query: 126 GKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPL 185
            K   +          Y+D   D  +                            +F+  L
Sbjct: 231 LKAEYEF------DSPYWDDISDSAK----------------------------DFIRHL 256
Query: 186 LDFTPEKRPTAQQCLQHPWLSLRNSTRDETKNKSNVEKVDVGMSK 230
           ++  PEKR T +Q LQHPW++  ++  D+  ++S  E++    +K
Sbjct: 257 MEKDPEKRFTCEQALQHPWIA-GDTALDKNIHQSVSEQIKKNFAK 300

>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant Length = 262

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 44/179 (24%), Positives = 67/179 (37%), Gaps = 49/179 (27%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEI-QTRQYRAPEVILRAGYSFSVDMWSFAC 91
           KPE  L G     K+ DFG +  A       +  T  Y  PE+I    +   VD+WS   
Sbjct: 132 KPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 191
Query: 92  TAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKR 151
             +E                            L+GK P        ++  Y + +   KR
Sbjct: 192 LCYEF---------------------------LVGKPP-------FEANTYQETY---KR 214
Query: 152 IRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNS 210
           I R++F   D        F    AR   + +  LL   P +RP  ++ L+HPW++  +S
Sbjct: 215 ISRVEFTFPD--------FVTEGAR---DLISRLLKHNPSQRPMLREVLEHPWITANSS 262

>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1 Length = 327

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 5/71 (7%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQ----TRQYRAPEVILRAGYSFSVDMWS 88
           KPE  +       K+ DFG  C+ +            T +Y APE+++R+G++ +VD WS
Sbjct: 148 KPENIMLNHQGHVKLTDFG-LCKESIHDGTVTHXFCGTIEYMAPEILMRSGHNRAVDWWS 206
Query: 89  FACTAFELATG 99
                +++ TG
Sbjct: 207 LGALMYDMLTG 217

>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I) Length = 327

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 5/71 (7%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQT----RQYRAPEVILRAGYSFSVDMWS 88
           KPE  +       K+ DFG  C+ +        T     +Y APE+++R+G++ +VD WS
Sbjct: 148 KPENIMLNHQGHVKLTDFG-LCKESIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWS 206
Query: 89  FACTAFELATG 99
                +++ TG
Sbjct: 207 LGALMYDMLTG 217

>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa Length = 267

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 44/179 (24%), Positives = 67/179 (37%), Gaps = 49/179 (27%)
Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEI-QTRQYRAPEVILRAGYSFSVDMWSFAC 91
           KPE  L G     K+ DFG +  A       +  T  Y  PE+I    +   VD+WS   
Sbjct: 134 KPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 193
Query: 92  TAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKR 151
             +E                            L+GK P        ++  Y + +   KR
Sbjct: 194 LCYEF---------------------------LVGKPP-------FEANTYQETY---KR 216
Query: 152 IRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNS 210
           I R++F   D        F    AR   + +  LL   P +RP  ++ L+HPW++  +S
Sbjct: 217 ISRVEFTFPD--------FVTEGAR---DLISRLLKHNPSQRPMLREVLEHPWITANSS 264

>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With Staurosporine At 2a Resolution Length = 345

Iteration: 1
 Score = 41.2 bits (95), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 25/72 (34%), Positives = 34/72 (47%), Gaps = 8/72 (11%)
Query: 42  DMRCKVVDFGNACRANKQFAEEIQ----TRQYRAPEVILRAGYSFSVDMWSFACTAFELA 97
           D   K+ DFG  C+ N     +      T  Y APE++L   Y+ SVD WSF    +E+ 
Sbjct: 154 DGHIKIADFG-MCKENMLGDAKTNXFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEML 212
Query: 98  TGDMLFAPKSGQ 109
            G    +P  GQ
Sbjct: 213 IGQ---SPFHGQ 221

>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2 Length = 365

Iteration: 1
 Score = 40.8 bits (94), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 43/181 (23%), Positives = 67/181 (37%), Gaps = 52/181 (28%)
Query: 33  KPERCLDGIDMRCKVVDFGNACR--ANKQFAEEIQTRQYRAPEVI------LRAGYSFSV 84
           KPE  L   +M+ ++ DFG +C     ++  E   T  Y APE++         GY   V
Sbjct: 227 KPENILLDDNMQIRLSDFGFSCHLEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEV 286
Query: 85  DMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFD 144
           D+W+     F L  G   F  +             LM+ +I +   + +     S ++ D
Sbjct: 287 DLWACGVILFTLLAGSPPFWHRRQ----------ILMLRMIMEGQYQFS-----SPEWDD 331
Query: 145 RHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPW 204
           R   +K                             + +  LL   PE R TA+Q LQHP+
Sbjct: 332 RSSTVK-----------------------------DLISRLLQVDPEARLTAEQALQHPF 362
Query: 205 L 205
Sbjct: 363 F 363

>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The Inhibitor Apigenin Length = 326

Iteration: 1
 Score = 40.4 bits (93), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 40/184 (21%), Positives = 78/184 (42%), Gaps = 26/184 (14%)
Query: 33  KPERCLDGIDMR-CKVVDFGNA--CRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWS 88
           KP   +   ++R  +++D+G A      K++   + +R ++ PE+++    Y +S+DMWS
Sbjct: 152 KPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWS 211
Query: 89  FACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIG------GAQSKDY 142
             C         M+F  +      ++ D L  + +++G     + +         Q +  
Sbjct: 212 LGCM-----FAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQLEAL 266
Query: 143 FDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQH 202
             RH    R   LKF + D             + E  +FL  LL +  ++R TA + + H
Sbjct: 267 VGRHS---RKPWLKFMNADN--------QHLVSPEAIDFLDKLLRYDHQERLTALEAMTH 315
Query: 203 PWLS 206
           P+  
Sbjct: 316 PYFQ 319

>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In Complex With The Inhibitor 3,4,5,6,7-Pentabromo-1h-Indazole (K64) Length = 327

Iteration: 1
 Score = 40.4 bits (93), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 40/184 (21%), Positives = 78/184 (42%), Gaps = 26/184 (14%)
Query: 33  KPERCLDGIDMR-CKVVDFGNA--CRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWS 88
           KP   +   ++R  +++D+G A      K++   + +R ++ PE+++    Y +S+DMWS
Sbjct: 152 KPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWS 211
Query: 89  FACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIG------GAQSKDY 142
             C         M+F  +      ++ D L  + +++G     + +         Q +  
Sbjct: 212 LGCM-----FAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQLEAL 266
Query: 143 FDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQH 202
             RH    R   LKF + D             + E  +FL  LL +  ++R TA + + H
Sbjct: 267 VGRHS---RKPWLKFMNADN--------QHLVSPEAIDFLDKLLRYDHQERLTALEAMTH 315
Query: 203 PWLS 206
           P+  
Sbjct: 316 PYFQ 319

>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex With The Inhibitor 4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68) Length = 331

Iteration: 1
 Score = 40.4 bits (93), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 40/184 (21%), Positives = 78/184 (42%), Gaps = 26/184 (14%)
Query: 33  KPERCLDGIDMR-CKVVDFGNA--CRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWS 88
           KP   +   ++R  +++D+G A      K++   + +R ++ PE+++    Y +S+DMWS
Sbjct: 152 KPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWS 211
Query: 89  FACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIG------GAQSKDY 142
             C         M+F  +      ++ D L  + +++G     + +         Q +  
Sbjct: 212 LGCM-----FAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQLEAL 266
Query: 143 FDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQH 202
             RH    R   LKF + D             + E  +FL  LL +  ++R TA + + H
Sbjct: 267 VGRHS---RKPWLKFMNADN--------QHLVSPEAIDFLDKLLRYDHQERLTALEAMTH 315
Query: 203 PWLS 206
           P+  
Sbjct: 316 PYFQ 319

>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The Inhibitor Luteolin Length = 326

Iteration: 1
 Score = 40.4 bits (93), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 40/184 (21%), Positives = 78/184 (42%), Gaps = 26/184 (14%)
Query: 33  KPERCLDGIDMR-CKVVDFGNA--CRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWS 88
           KP   +   ++R  +++D+G A      K++   + +R ++ PE+++    Y +S+DMWS
Sbjct: 152 KPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWS 211
Query: 89  FACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIG------GAQSKDY 142
             C         M+F  +      ++ D L  + +++G     + +         Q +  
Sbjct: 212 LGCM-----FAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQLEAL 266
Query: 143 FDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQH 202
             RH    R   LKF + D             + E  +FL  LL +  ++R TA + + H
Sbjct: 267 VGRHS---RKPWLKFMNADN--------QHLVSPEAIDFLDKLLRYDHQERLTALEAMTH 315
Query: 203 PWLS 206
           P+  
Sbjct: 316 PYFQ 319

>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Novel Bosutinib Isoform 1, Previously Thought To Be Bosutinib Length = 293

Iteration: 1
 Score = 40.4 bits (93), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 44/175 (25%), Positives = 67/175 (38%), Gaps = 53/175 (30%)
Query: 46  KVVDFGNACRANKQFAEE---IQTRQYRAPEVIL-----RAGYSFSVDMWSFACTAFELA 97
           ++ DFG + +  K   +    I T  + APEV++        Y +  D+WS   T  E+A
Sbjct: 149 RLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMA 208
Query: 98  TGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKF 157
                          E   H     EL    P ++ +  A+S        D   +     
Sbjct: 209 Q-------------IEPPHH-----EL---NPMRVLLKIAKS--------DPPTLLTPSK 239
Query: 158 WSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNSTR 212
           WS+                EF +FL   LD  PE RP+A Q L+HP++S   S +
Sbjct: 240 WSV----------------EFRDFLKIALDKNPETRPSAAQLLEHPFVSSITSNK 278

>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase Ck2 (Alpha-Subunit) And Mg-Amppnp Length = 327

Iteration: 1
 Score = 40.4 bits (93), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 40/184 (21%), Positives = 78/184 (42%), Gaps = 26/184 (14%)
Query: 33  KPERCLDGIDMR-CKVVDFGNA--CRANKQFAEEIQTRQYRAPEVILR-AGYSFSVDMWS 88
           KP   +   ++R  +++D+G A      K++   + +R ++ PE+++    Y +S+DMWS
Sbjct: 152 KPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWS 211
Query: 89  FACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIG------GAQSKDY 142
             C         M+F  +      ++ D L  + +++G     + +         Q +  
Sbjct: 212 LGCM-----FAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQLEAL 266
Query: 143 FDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQH 202
             RH    R   LKF + D             + E  +FL  LL +  ++R TA + + H
Sbjct: 267 VGRHS---RKPWLKFMNADN--------QHLVSPEAIDFLDKLLRYDHQERLTALEAMTH 315
Query: 203 PWLS 206
           P+  
Sbjct: 316 PYFQ 319

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	237
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	7e-75
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	6e-72
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	2e-45
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	4e-45
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	8e-45
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	9e-45
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	3e-44
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	2e-24
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	5e-24
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	2e-21
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	3e-21
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	6e-21
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	7e-21
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	2e-20
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	2e-20
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	2e-20
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	6e-20
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	1e-19
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	1e-19
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	2e-19
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	2e-19
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	3e-19
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	2e-18
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	5e-17
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	6e-17
3rp9_A	458	Mitogen-activated protein kinase; structural genom	9e-17
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	2e-16
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	2e-16
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	3e-16
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	3e-16
3niz_A	311	Rhodanese family protein; structural genomics, str	3e-16
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	4e-16
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	4e-16
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	7e-16
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	9e-16
3o0g_A	292	Cell division protein kinase 5; kinase activator c	1e-15
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	2e-15
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	4e-15
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	5e-15
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	5e-15
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	6e-15
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	2e-14
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	2e-14
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	3e-14
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	3e-14
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	4e-14
2a19_B	284	Interferon-induced, double-stranded RNA-activated	8e-14
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	1e-13
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	1e-13
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	2e-13
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	5e-13
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	1e-12
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	1e-12
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	2e-12
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	2e-12
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	3e-12
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	3e-12
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	4e-12
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	5e-12
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	1e-11
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	1e-11
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	2e-11
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	2e-11
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	4e-11
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	4e-11
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	4e-11
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	6e-11
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	7e-11
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	7e-11
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	8e-11
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	1e-10
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	2e-10
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	2e-10
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	2e-10
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	3e-10
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	3e-10
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	3e-10
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	5e-10
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	7e-10
1uu3_A	310	HPDK1, 3-phosphoinositide dependent protein kinase	1e-09
2dyl_A	318	Dual specificity mitogen-activated protein kinase	2e-09
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	2e-09
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	3e-09
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	5e-09
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	1e-08
3aln_A	327	Dual specificity mitogen-activated protein kinase;	1e-08
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	1e-08
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	3e-08
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	4e-08
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	8e-08
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	8e-08
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	9e-08
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	2e-07
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	3e-07
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	3e-07
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	7e-06
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	3e-07
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	1e-05
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	3e-07
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	4e-05
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	3e-07
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	3e-07
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	4e-07
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	6e-06
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	4e-07
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	4e-07
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	5e-07
3bhy_A	283	Death-associated protein kinase 3; death associate	5e-07
3bhy_A	283	Death-associated protein kinase 3; death associate	3e-05
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	5e-07
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	8e-07
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	6e-04
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	8e-07
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	8e-07
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	2e-05
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	8e-07
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	2e-05
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	9e-07
3fme_A	290	Dual specificity mitogen-activated protein kinase;	9e-07
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	1e-06
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	1e-06
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	2e-05
3pvu_A	695	Beta-adrenergic receptor kinase 1; transferase, se	1e-06
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	1e-06
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	2e-06
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	3e-05
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	2e-06
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	2e-06
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	2e-06
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	3e-06
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	1e-05
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	3e-06
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	4e-06
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	4e-06
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	1e-04
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	4e-06
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	7e-05
3q4u_A	301	Activin receptor type-1; structural genomics conso	4e-06
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	5e-06
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	6e-05
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	7e-06
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	3e-04
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	8e-06
3g51_A	325	Ribosomal protein S6 kinase alpha-3; N-terminal ki	1e-05
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	1e-05
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	1e-05
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	1e-05
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	1e-05
3an0_A	340	Dual specificity mitogen-activated protein kinase;	1e-05
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	1e-05
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	1e-05
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	8e-05
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	1e-05
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	2e-05
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	1e-04
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	2e-05
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	2e-05
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	3e-05
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	2e-05
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	3e-05
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	3e-05
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	1e-04
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	3e-05
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	7e-05
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	3e-05
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	3e-05
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	4e-05
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	4e-05
3soc_A	322	Activin receptor type-2A; structural genomics cons	4e-05
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	4e-05
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	5e-05
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	5e-05
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	7e-05
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	7e-05
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	8e-05
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	3e-04
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	8e-05
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	8e-05
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	9e-05
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	1e-04
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	1e-04
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	1e-04
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	1e-04
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	2e-04
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	1e-04
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	1e-04
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	2e-04
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	2e-04
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	2e-04
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	2e-04
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	3e-04
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	5e-04
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	6e-04
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	7e-04
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	9e-04

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* Length = 397

 Score =  231 bits (590), Expect = 7e-75
 Identities = 87/165 (52%), Positives = 123/165 (74%)

Query: 42  DMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDM 101
            ++ K+ D GNAC  +K F E+IQTRQYR+ EV++ +GY+   D+WS AC AFELATGD 
Sbjct: 232 KLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIGSGYNTPADIWSTACMAFELATGDY 291

Query: 102 LFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLD 161
           LF P SG+ +  DEDH+AL++EL+GK+PRK+ + G  SK++F + GDLK I +LK W L 
Sbjct: 292 LFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLF 351

Query: 162 RLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLS 206
            +LV+KY +S+ +A  F +FL+P+L+  PEKR TA +CL+HPWL+
Sbjct: 352 EVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRHPWLN 396

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A Length = 373

 Score =  223 bits (569), Expect = 6e-72
 Identities = 74/195 (37%), Positives = 112/195 (57%), Gaps = 6/195 (3%)

Query: 33  KPERCLDGIDMRC------KVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDM 86
           KPE  L  I          K+ D GNAC  ++ +   IQTR+YR+PEV+L A +    D+
Sbjct: 159 KPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADI 218

Query: 87  WSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRH 146
           WS AC  FEL TGD LF P  G  + +D+DH+A ++EL+G++P  +   G  ++ +F+  
Sbjct: 219 WSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSR 278

Query: 147 GDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLS 206
           G L+ I +LKFW L+ +L +KY+FS+ +A+E ++FL P+L   P KR  A   + HPWL 
Sbjct: 279 GLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLK 338

Query: 207 LRNSTRDETKNKSNV 221
                 +       +
Sbjct: 339 DTLGMEEIRVPDREL 353

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} Length = 360

 Score =  154 bits (391), Expect = 2e-45
 Identities = 51/164 (31%), Positives = 74/164 (45%), Gaps = 10/164 (6%)

Query: 46  KVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAP 105
           K++DFG A   +      I TRQYRAPEVIL  G+  S DMWSF C   EL TG +LF  
Sbjct: 202 KLIDFGCATFKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRT 261

Query: 106 KSGQGFCEDEDHLALMMELIGKMPRK-IAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLL 164
                     +HLA+M  +I  +P+  +      +   +    +LK        S++ + 
Sbjct: 262 HE------HMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIK 315

Query: 165 VDKYRFSETDA---REFAEFLVPLLDFTPEKRPTAQQCLQHPWL 205
             K             F +FL  +L   P  RP+  + L+H +L
Sbjct: 316 HVKKCLPLYKIIKHELFCDFLYSILQIDPTLRPSPAELLKHKFL 359

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* Length = 429

 Score =  154 bits (392), Expect = 4e-45
 Identities = 66/212 (31%), Positives = 95/212 (44%), Gaps = 30/212 (14%)

Query: 33  KPERCL--DGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFA 90
           KPE  L         KV+DFG++C  +++    IQ+R YRAPEVIL A Y   +DMWS  
Sbjct: 227 KPENILLKQQGRSGIKVIDFGSSCYEHQRVYTYIQSRFYRAPEVILGARYGMPIDMWSLG 286

Query: 91  CTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLK 150
           C   EL TG  L       G  E  D LA M+EL+G   +K+     ++K++    G  +
Sbjct: 287 CILAELLTGYPLL-----PGEDE-GDQLACMIELLGMPSQKLLDASKRAKNFVSSKGYPR 340

Query: 151 -------------------RIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPE 191
                              R  +L+     R   +       D   F +FL   L++ P 
Sbjct: 341 YCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGN--ALKGCDDPLFLDFLKQCLEWDPA 398

Query: 192 KRPTAQQCLQHPWLSLRNSTRDETKNKSNVEK 223
            R T  Q L+HPWL  R   +  T  K++V++
Sbjct: 399 VRMTPGQALRHPWLR-RRLPKPPTGEKTSVKR 429

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* Length = 339

 Score =  152 bits (385), Expect = 8e-45
 Identities = 47/170 (27%), Positives = 77/170 (45%), Gaps = 20/170 (11%)

Query: 46  KVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAP 105
           KVVDFG+A   ++  +  + TR YRAPEVIL  G+S   D+WS  C   E   G  +F  
Sbjct: 177 KVVDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVF-- 234

Query: 106 KSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDL--------KRIRRLKF 157
                    E HLA+M  ++G +P+ +     + K +     D            R  K 
Sbjct: 235 ---PTHDSKE-HLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACK- 289

Query: 158 WSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSL 207
             L   ++ +    + +     + +  +L++ P KR T ++ L+HP+  L
Sbjct: 290 -PLKEFMLSQ----DVEHERLFDLIQKMLEYDPAKRITLREALKHPFFDL 334

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* Length = 382

 Score =  152 bits (387), Expect = 9e-45
 Identities = 50/200 (25%), Positives = 88/200 (44%), Gaps = 30/200 (15%)

Query: 33  KPERCL--DGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFA 90
           KPE  L  +      K+VDFG++C+  ++  + IQ+R YR+PEV+L   Y  ++DMWS  
Sbjct: 186 KPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLG 245

Query: 91  CTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDL- 149
           C   E+ TG+ LF      G  E  D +  ++E++G  P  I     +++ +F++  D  
Sbjct: 246 CILVEMHTGEPLF-----SGANE-VDQMNKIVEVLGIPPAHILDQAPKARKFFEKLPDGT 299

Query: 150 ----------KRIRRLKFWSLDRLLVDKYRFS-----------ETDAREFAEFLVPLLDF 188
                     +  +      L  +L  +                 D  +F + ++ +LD+
Sbjct: 300 WNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDY 359

Query: 189 TPEKRPTAQQCLQHPWLSLR 208
            P+ R      LQH +    
Sbjct: 360 DPKTRIQPYYALQHSFFKKT 379

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* Length = 355

 Score =  150 bits (382), Expect = 3e-44
 Identities = 45/164 (27%), Positives = 73/164 (44%), Gaps = 10/164 (6%)

Query: 46  KVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAP 105
           +V DFG+A   ++     + TR YR PEVIL  G++   D+WS  C  FE   G  LF  
Sbjct: 182 RVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLF-- 239

Query: 106 KSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHG---DLKRIRRLKFWSLDR 162
              Q     E HL +M +++G +P  + I   + + YF + G   D             +
Sbjct: 240 ---QTHENRE-HLVMMEKILGPIPSHM-IHRTRKQKYFYKGGLVWDENSSDGRYVKENCK 294

Query: 163 LLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLS 206
            L         +  +  + +  +L+F P +R T  + L HP+ +
Sbjct: 295 PLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALLHPFFA 338

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* Length = 464

 Score = 99.5 bits (248), Expect = 2e-24
 Identities = 51/188 (27%), Positives = 78/188 (41%), Gaps = 16/188 (8%)

Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFA--EEIQTRQYRAPEVILRAGYSFSVDMWSFA 90
           KP   +   D   K++DFG A  A   F     + TR YRAPEVIL  GY  +VD+WS  
Sbjct: 191 KPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 250

Query: 91  CTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSK--DYFDRHGD 148
           C   E+    +LF  +         D    ++E +G  P    +   Q    +Y +    
Sbjct: 251 CIMGEMVRHKILFPGRDYI------DQWNKVIEQLGT-PCPEFMKKLQPTVRNYVEN--- 300

Query: 149 LKRIRRLKFWSL--DRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLS 206
             +   L F  L  D L       ++  A +  + L  +L   P KR +    LQHP+++
Sbjct: 301 RPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 360

Query: 207 LRNSTRDE 214
           +     + 
Sbjct: 361 VWYDPAEV 368

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371

 Score = 97.5 bits (243), Expect = 5e-24
 Identities = 50/188 (26%), Positives = 76/188 (40%), Gaps = 16/188 (8%)

Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFA--EEIQTRQYRAPEVILRAGYSFSVDMWSFA 90
           KP   +   D   K++DFG A  A   F     + TR YRAPEVIL  GY  +VD+WS  
Sbjct: 154 KPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 213

Query: 91  CTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSK--DYFDRHGD 148
           C   E+  G +LF            D    ++E +G  P    +   Q     Y +    
Sbjct: 214 CIMGEMIKGGVLFPGTDHI------DQWNKVIEQLGT-PCPEFMKKLQPTVRTYVEN--- 263

Query: 149 LKRIRRLKFWSL--DRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLS 206
             +     F  L  D L       ++  A +  + L  +L     KR +  + LQHP+++
Sbjct: 264 RPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYIN 323

Query: 207 LRNSTRDE 214
           +     + 
Sbjct: 324 VWYDPSEA 331

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} Length = 353

 Score = 90.0 bits (224), Expect = 2e-21
 Identities = 51/177 (28%), Positives = 75/177 (42%), Gaps = 22/177 (12%)

Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRA-GYSFSVDMWSFAC 91
           KP       D   K++DFG A  A+ +    + TR YRAPEVIL    Y+ +VD+WS  C
Sbjct: 153 KPGNLAVNEDCELKILDFGLARHADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGC 212

Query: 92  TAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKI--AIGGAQSKDYFDRHGDL 149
              E+ TG  LF  K         D L  ++++ G    +    +    +K Y      L
Sbjct: 213 IMAEMLTGKTLFKGKDYL------DQLTQILKVTGVPGTEFVQKLNDKAAKSYIQS---L 263

Query: 150 KRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLS 206
            +  R  F  L       +  +   A +    L  +L+   +KR TA Q L HP+  
Sbjct: 264 PQTPRKDFTQL-------FPRASPQAADL---LEKMLELDVDKRLTAAQALTHPFFE 310

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 Length = 367

 Score = 89.7 bits (223), Expect = 3e-21
 Identities = 50/177 (28%), Positives = 76/177 (42%), Gaps = 22/177 (12%)

Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRA-GYSFSVDMWSFAC 91
           KP       D   K++DFG A +A+ +    + TR YRAPEVIL    Y+ +VD+WS  C
Sbjct: 155 KPGNLAVNEDCELKILDFGLARQADSEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGC 214

Query: 92  TAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKI--AIGGAQSKDYFDRHGDL 149
              E+ TG  LF            D L  +M++ G  P +    +   ++K+Y      L
Sbjct: 215 IMAEMITGKTLFKGSD------HLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKG---L 265

Query: 150 KRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLS 206
             + +  F S+          +   A      L  +L    E+R TA + L HP+  
Sbjct: 266 PELEKKDFASI-------LTNASPLAVNL---LEKMLVLDAEQRVTAGEALAHPYFE 312

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} Length = 360

 Score = 88.9 bits (221), Expect = 6e-21
 Identities = 39/182 (21%), Positives = 68/182 (37%), Gaps = 30/182 (16%)

Query: 37  CLDGIDMRCKVVDFGNACRA---NKQFAEEIQTRQYRAPEVILRA-GYSFSVDMWSFACT 92
            ++  D   K+ DFG+A +    ++     I +R YRAPE+I     Y+ +VD+WS  C 
Sbjct: 163 LVNEADGTLKLCDFGSA-KKLSPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCI 221

Query: 93  AFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPR----KIAIGGAQSKDYFDRHGD 148
             E+  G+ +F   +          L  ++ ++G   R    K+         Y  +   
Sbjct: 222 FAEMMLGEPIFRGDNSA------GQLHEIVRVLGCPSREVLRKLNPSHTDVDLYNSKGIP 275

Query: 149 LKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLS-L 207
              +         +   D               L  LL + PE+R    + L HP+   L
Sbjct: 276 WSNVFSDHSLKDAKEAYD--------------LLSALLQYLPEERMKPYEALCHPYFDEL 321

Query: 208 RN 209
            +
Sbjct: 322 HD 323

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... Length = 367

 Score = 88.5 bits (220), Expect = 7e-21
 Identities = 47/177 (26%), Positives = 76/177 (42%), Gaps = 22/177 (12%)

Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRA-GYSFSVDMWSFAC 91
           KP       D   K++DFG A     +    + TR YRAPE++L    Y+ +VD+WS  C
Sbjct: 159 KPSNLAVNEDCELKILDFGLARHTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 218

Query: 92  TAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKI--AIGGAQSKDYFDRHGDL 149
              EL TG  LF            D L L++ L+G    ++   I    +++Y      L
Sbjct: 219 IMAELLTGRTLFPGTDHI------DQLKLILRLVGTPGAELLKKISSESARNYIQS---L 269

Query: 150 KRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLS 206
            ++ ++ F ++         F   +     + L  +L    +KR TA Q L H + +
Sbjct: 270 TQMPKMNFANV---------FIGANP-LAVDLLEKMLVLDSDKRITAAQALAHAYFA 316

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} Length = 320

 Score = 86.9 bits (216), Expect = 2e-20
 Identities = 44/186 (23%), Positives = 76/186 (40%), Gaps = 29/186 (15%)

Query: 38  LDGIDMRCKVVDFGNACRANKQFA------EEIQTRQYRAPEVILRA-GYSFSVDMWSFA 90
           ++  D+  K+ DFG A   +  ++      E + T+ YR+P ++L    Y+ ++DMW+  
Sbjct: 153 INTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAG 212

Query: 91  CTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSK--DYFDRHGD 148
           C   E+ TG  LFA         + + + L++E I     +       S    Y      
Sbjct: 213 CIFAEMLTGKTLFAGAH------ELEQMQLILESIPV-VHEEDRQELLSVIPVYIRN--- 262

Query: 149 LKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLR 208
                      L                E  +FL  +L F+P  R TA++ L HP++S+ 
Sbjct: 263 DMTEPHKPLTQL---------LPGISR-EAVDFLEQILTFSPMDRLTAEEALSHPYMSIY 312

Query: 209 NSTRDE 214
           +   DE
Sbjct: 313 SFPMDE 318

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} Length = 383

 Score = 87.9 bits (218), Expect = 2e-20
 Identities = 48/188 (25%), Positives = 81/188 (43%), Gaps = 23/188 (12%)

Query: 37  CLDGIDMRCKVVDFGNA--CRANKQFAEEIQTRQYRAPEVILRA-GYSFSVDMWSFACTA 93
            ++  D   K+ DFG+A     ++     I +R YRAPE++L A  Y+ S+D+WS  C  
Sbjct: 173 LVNSKDNTLKLCDFGSAKKLIPSEPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVF 232

Query: 94  FELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIR 153
            EL  G  LF+ ++        D L  +++++G  P K  +       Y +       ++
Sbjct: 233 GELILGKPLFSGETSI------DQLVRIIQIMGT-PTKEQMIRMNP-HYTEVR--FPTLK 282

Query: 154 RLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLS-LRNSTR 212
              +  +           E       + L  +L + P+ R    + + HP+   LRNS  
Sbjct: 283 AKDWRKI---------LPEGTPSLAIDLLEQILRYEPDLRINPYEAMAHPFFDHLRNSYE 333

Query: 213 DETKNKSN 220
            E KN SN
Sbjct: 334 SEVKNNSN 341

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311

 Score = 86.5 bits (215), Expect = 2e-20
 Identities = 46/181 (25%), Positives = 74/181 (40%), Gaps = 27/181 (14%)

Query: 33  KPERCLDGIDMRC--KVVDFGNACRA----NKQFAEEIQTRQYRAPEVILRA-GYSFSVD 85
           KPE  L  I      K+ DFG A R     +  + +E+ TR YR+PE+++    Y   VD
Sbjct: 129 KPENIL--ITKHSVIKLCDFGFA-RLLTGPSDYYDDEVATRWYRSPELLVGDTQYGPPVD 185

Query: 86  MWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDR 145
           +W+  C   EL +G  L+  KS      D D L L+ + +G +  +     + ++ +   
Sbjct: 186 VWAIGCVFAELLSGVPLWPGKS------DVDQLYLIRKTLGDLIPRHQQVFSTNQYF--- 236

Query: 146 HGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 205
                   ++        L  K+      A      L   L   P +R T +Q L HP+ 
Sbjct: 237 -----SGVKIPDPEDMEPLELKFPNISYPALGL---LKGCLHMDPTERLTCEQLLHHPYF 288

Query: 206 S 206
            
Sbjct: 289 E 289

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331

 Score = 85.7 bits (213), Expect = 6e-20
 Identities = 44/179 (24%), Positives = 70/179 (39%), Gaps = 27/179 (15%)

Query: 33  KPERCLDGIDMRC--KVVDFGNACRA----NKQFAEEIQTRQYRAPEVILRAG-YSFSVD 85
           KPE  L  +      K+ DFG A R      + + +E+ TR YRAPE+++    Y  +VD
Sbjct: 151 KPENIL--VSQSGVVKLCDFGFA-RTLAAPGEVYDDEVATRWYRAPELLVGDVKYGKAVD 207

Query: 86  MWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDR 145
           +W+  C   E+  G+ LF   S      D D L  +M  +G +  +      ++  +   
Sbjct: 208 VWAIGCLVTEMFMGEPLFPGDS------DIDQLYHIMMCLGNLIPRHQELFNKNPVF--- 258

Query: 146 HGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPW 204
                   RL        L  +Y        +        L   P+KRP   + L H +
Sbjct: 259 -----AGVRLPEIKEREPLERRYPKLSEVVIDL---AKKCLHIDPDKRPFCAELLHHDF 309

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} Length = 362

 Score = 85.4 bits (212), Expect = 1e-19
 Identities = 39/188 (20%), Positives = 74/188 (39%), Gaps = 23/188 (12%)

Query: 33  KPERCLDGIDMRCKVVDFGNA--CRANKQFAEEIQTRQYRAPEVIL-RAGYSFSVDMWSF 89
            P   L   +    + DF  A    A+      +  R YRAPE+++   G++  VDMWS 
Sbjct: 161 HPGNILLADNNDITICDFNLAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSA 220

Query: 90  ACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKI--AIGGAQSKDYFDRHG 147
            C   E+     LF   +        + L  ++E++G    +         ++DY     
Sbjct: 221 GCVMAEMFNRKALFRGSTFY------NQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNS- 273

Query: 148 DLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSL 207
            L  +    + ++          ++  A +    +  +L+F P++R + +Q L+HP+   
Sbjct: 274 -LSNVPARAWTAV-------VPTADPVALDL---IAKMLEFNPQRRISTEQALRHPYFES 322

Query: 208 RNSTRDET 215
                D T
Sbjct: 323 LFDPLDLT 330

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394

 Score = 85.5 bits (212), Expect = 1e-19
 Identities = 51/194 (26%), Positives = 80/194 (41%), Gaps = 48/194 (24%)

Query: 33  KPER-CLDGIDMRCKVVDFGNA--CRANKQFAEEIQTRQYRAPEVILRA-GYSFSVDMWS 88
           KP+   LD      K++DFG+A    A +     I +R YRAPE+I  A  Y+ ++D+WS
Sbjct: 168 KPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSYICSRYYRAPELIFGATNYTTNIDIWS 227

Query: 89  FACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGD 148
             C   EL  G  LF  +SG       D L  +++++G   R+                 
Sbjct: 228 TGCVMAELMQGQPLFPGESG------IDQLVEIIKVLGTPSRE----------------Q 265

Query: 149 LKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVP------------LLDFTPEKRPTA 196
           +K +               ++F +     F++   P            LL++TP  R TA
Sbjct: 266 IKTMNPNYME---------HKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTA 316

Query: 197 QQCLQHPWL-SLRN 209
            + L HP+   LR 
Sbjct: 317 IEALCHPFFDELRT 330

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A 3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A* 2oji_A* ... Length = 364

 Score = 85.0 bits (211), Expect = 2e-19
 Identities = 47/183 (25%), Positives = 80/183 (43%), Gaps = 28/183 (15%)

Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFA------EEIQTRQYRAPEVILRA-GYSFSVD 85
           KP   L       K+ DFG A  A+          E + TR YRAPE++L + GY+ S+D
Sbjct: 155 KPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSID 214

Query: 86  MWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKI--AIGGAQSKDYF 143
           +WS  C   E+ +   +F  K         D L  ++ ++G   ++    I   ++++Y 
Sbjct: 215 IWSVGCILAEMLSNRPIFPGKHYL------DQLNHILGILGSPSQEDLNCIINLKARNYL 268

Query: 144 DRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHP 203
                L    ++ +  L       +  +++ A +    L  +L F P KR   +Q L HP
Sbjct: 269 LS---LPHKNKVPWNRL-------FPNADSKALDL---LDKMLTFNPHKRIEVEQALAHP 315

Query: 204 WLS 206
           +L 
Sbjct: 316 YLE 318

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420

 Score = 85.5 bits (212), Expect = 2e-19
 Identities = 46/196 (23%), Positives = 76/196 (38%), Gaps = 52/196 (26%)

Query: 33  KPERCLDGIDMRC---KVVDFGNA--CRANKQFAEEIQTRQYRAPEVILRA-GYSFSVDM 86
           KP+  L  +D      K+ DFG+A      +     I +R YRAPE+I  A  Y+ S+D+
Sbjct: 183 KPQNLL--LDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDV 240

Query: 87  WSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRH 146
           WS  C   EL  G  +F   SG       D L  +++++G   R+               
Sbjct: 241 WSAGCVLAELLLGQPIFPGDSGV------DQLVEIIKVLGTPTRE--------------- 279

Query: 147 GDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVP------------LLDFTPEKRP 194
             ++ +               ++F +  A  + +   P            LL++TP  R 
Sbjct: 280 -QIREMNPNYTE---------FKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARL 329

Query: 195 TAQQCLQHPWLS-LRN 209
           T  +   H +   LR+
Sbjct: 330 TPLEACAHSFFDELRD 345

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} Length = 388

 Score = 84.7 bits (210), Expect = 3e-19
 Identities = 39/159 (24%), Positives = 68/159 (42%), Gaps = 12/159 (7%)

Query: 62  EEIQTRQYRAPEVILRA-GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLAL 120
           + + TR YRAPE++L +  Y+  +DMWS  C   E+  G  +F   S        + L  
Sbjct: 189 DYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTM------NQLER 242

Query: 121 MMELIGKMPRKI--AIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREF 178
           ++ +I     +   +I    +K   +   +   IR+     +     +        A   
Sbjct: 243 IIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCN 302

Query: 179 AE---FLVPLLDFTPEKRPTAQQCLQHPWLSLRNSTRDE 214
            E    L  LL F P KR +A   L+HP++S+ ++  +E
Sbjct: 303 EEALDLLDKLLQFNPNKRISANDALKHPFVSIFHNPNEE 341

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* Length = 353

 Score = 81.9 bits (203), Expect = 2e-18
 Identities = 48/191 (25%), Positives = 74/191 (38%), Gaps = 36/191 (18%)

Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFA-------------EEIQTRQYRAPEVILRA- 78
           KP   L   +   KV DFG A   ++  A             E + TR YRAPEV+L + 
Sbjct: 139 KPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSA 198

Query: 79  GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKI---AIG 135
            YS ++D+WS  C   EL     +F  +  +        L L+  +IG          I 
Sbjct: 199 KYSRAMDVWSCGCILAELFLRRPIFPGRDYR------HQLLLIFGIIGTPHSDNDLRCIE 252

Query: 136 GAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPT 195
             ++++Y      L          +       +        +    L  +L F P KR T
Sbjct: 253 SPRAREYIKS---LPMYPAAPLEKM-------FPRVNPKGIDL---LQRMLVFDPAKRIT 299

Query: 196 AQQCLQHPWLS 206
           A++ L+HP+L 
Sbjct: 300 AKEALEHPYLQ 310

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308

 Score = 77.2 bits (191), Expect = 5e-17
 Identities = 42/167 (25%), Positives = 65/167 (38%), Gaps = 35/167 (20%)

Query: 46  KVVDFGNACRA---NKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDML 102
           K+ DFG A R           + T  YRAPEV+L++ Y+  VDMWS  C   E+     L
Sbjct: 160 KLADFGLA-RIYSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPL 218

Query: 103 FAPKSGQGFCEDEDHLALMMELIG-----KMPRKIAIGGAQSKDYFDRHGDLKRIRRLKF 157
           F   S      + D L  + +LIG       PR +++              ++ +     
Sbjct: 219 FCGNS------EADQLGKIFDLIGLPPEDDWPRDVSLPRGAFPPR--GPRPVQSV----V 266

Query: 158 WSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPW 204
             ++                    L+ +L F P KR +A + LQH +
Sbjct: 267 PEMEESGAQ--------------LLLEMLTFNPHKRISAFRALQHSY 299

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329

 Score = 77.3 bits (191), Expect = 6e-17
 Identities = 52/177 (29%), Positives = 75/177 (42%), Gaps = 46/177 (25%)

Query: 46  KVVDFGNACRA----NKQFAEEIQTRQYRAPEVILRA-GYSFSVDMWSFACTAFELATGD 100
           K+ DFG A RA     +QF  EI T  YR PE++L +  YS SVD+WS AC   E+    
Sbjct: 177 KIGDFGLA-RAFGIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKT 235

Query: 101 MLFAPKSGQGFCEDEDHLALMMELIG-----------KMPRKIAIGGAQSKDYFDRHGDL 149
            LF   S      + D L  + E++G            +P          K  F +    
Sbjct: 236 PLFPGDS------EIDQLFKIFEVLGLPDDTTWPGVTALP--------DWKQSFPKF-RG 280

Query: 150 KRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLS 206
           K ++R+    LD   +D               L  +L+  P KR +A+  L+HP+ S
Sbjct: 281 KTLKRVLGALLDDEGLD--------------LLTAMLEMDPVKRISAKNALEHPYFS 323

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} Length = 458

 Score = 77.6 bits (191), Expect = 9e-17
 Identities = 43/210 (20%), Positives = 71/210 (33%), Gaps = 41/210 (19%)

Query: 25  SMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRA-GYSFS 83
           ++   E    +  +   +    +V F +     +Q    + TR YRAPE+IL    Y+ +
Sbjct: 205 TVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEA 264

Query: 84  VDMWSFACTAFELATGDMLFAPKSGQG-------------------------FCEDEDHL 118
           +D+WS  C   EL                                          + D L
Sbjct: 265 IDVWSIGCIFAELLNMIKENVAYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQL 324

Query: 119 ALMMELIGKMPRKI--AIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAR 176
            ++  ++G    +   A+    +K Y         IR          L +++  S  DA 
Sbjct: 325 NVIFNILGTPSEEDIEALEKEDAKRY---------IRIFPKRE-GTDLAERFPASSADAI 374

Query: 177 EFAEFLVPLLDFTPEKRPTAQQCLQHPWLS 206
                L  +L F P KR T  +CL HP+  
Sbjct: 375 HL---LKRMLVFNPNKRITINECLAHPFFK 401

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* Length = 432

 Score = 76.7 bits (189), Expect = 2e-16
 Identities = 40/170 (23%), Positives = 57/170 (33%), Gaps = 38/170 (22%)

Query: 62  EEIQTRQYRAPEVILRA-GYSFSVDMWSFACTAFELATGDM-----------LF------ 103
             + TR YRAPE+IL    Y+ S+D+WS  C   EL                LF      
Sbjct: 210 SHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFPLFPGSSCF 269

Query: 104 --APKSGQGFCEDEDH---LALMMELIGKMPRK--IAIGGAQSKDYFDRHGDLKRIRRLK 156
             +P        ++ +   L ++  +IG         I   +   Y          + + 
Sbjct: 270 PLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKL---FPHRKPIN 326

Query: 157 FWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLS 206
                     KY     D       L  +L F P KR T  Q L HP+L 
Sbjct: 327 L-------KQKYPSISDDGINL---LESMLKFNPNKRITIDQALDHPYLK 366

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B Length = 326

 Score = 75.7 bits (187), Expect = 2e-16
 Identities = 44/175 (25%), Positives = 63/175 (36%), Gaps = 47/175 (26%)

Query: 46  KVVDFGNACRA---NKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDML 102
           K+ DFG A R           + T  YRAPEV+L++ Y+  VD+WS  C   E+     L
Sbjct: 160 KLADFGLA-RIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPL 218

Query: 103 FAPKSGQGFCEDEDHLALMMELIG-----------KMPRKIAIGGAQSKDYFDRHGDLKR 151
           F   S      D D L  ++++IG            +P          +  F       +
Sbjct: 219 FRGSS------DVDQLGKILDVIGLPGEEDWPRDVALP----------RQAFHSKS--AQ 260

Query: 152 IRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLS 206
                   +D L  D               L+  L F P KR +A   L HP+  
Sbjct: 261 PIEKFVTDIDELGKD--------------LLLKCLTFNPAKRISAYSALSHPYFQ 301

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A* 3owj_A* 3owk_A* ... Length = 330

 Score = 75.8 bits (187), Expect = 3e-16
 Identities = 36/188 (19%), Positives = 74/188 (39%), Gaps = 36/188 (19%)

Query: 38  LDGIDMRCKVVDFGNA--CRANKQFAEEIQTRQYRAPEVILRA-GYSFSVDMWSFACTAF 94
           +D    + +++D+G A      +++   + +R ++ PE+++    Y +S+DMWS  C   
Sbjct: 163 IDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLA 222

Query: 95  ELATG-DMLFAPKSGQGFCEDEDHLALMMELIG-----KMPRKIAIGGAQSKDYFDRHGD 148
            +    +  F          + D L  + +++G         K  I       + D  G 
Sbjct: 223 SMIFRKEPFFHGHD------NYDQLVRIAKVLGTEDLYDYIDKYNI--ELDPRFNDILGR 274

Query: 149 LKRIRRLKFWSLDRLLVDKYRFSETDAREFAE-----FLVPLLDFTPEKRPTAQQCLQHP 203
             R R    W          RF  ++ +         FL  LL +  + R TA++ ++HP
Sbjct: 275 HSRKR----WE---------RFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHP 321

Query: 204 WL-SLRNS 210
           +  ++   
Sbjct: 322 YFYTVVKD 329

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score = 75.6 bits (186), Expect = 3e-16
 Identities = 41/190 (21%), Positives = 60/190 (31%), Gaps = 35/190 (18%)

Query: 33  KPE-----RCLDGIDMRCKVVDFG--NACRANKQFAEEIQTRQYRAPEVILRA------- 78
           KP         DG     K+ DFG       ++QF     T +Y  P++  RA       
Sbjct: 139 KPGNIMRVIGEDG-QSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQ 197

Query: 79  -GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGA 137
             Y  +VD+WS   T +  ATG + F P  G        +  +M ++I   P      GA
Sbjct: 198 KKYGATVDLWSIGVTFYHAATGSLPFRPFEG-----PRRNKEVMYKIITGKPS-----GA 247

Query: 138 QSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQ 197
            S      +G +     +               S          L  +L+   EK     
Sbjct: 248 ISGVQKAENGPIDWSGDMPVSC---------SLSRGLQVLLTPVLANILEADQEKCWGFD 298

Query: 198 QCLQHPWLSL 207
           Q        L
Sbjct: 299 QFFAETSDIL 308

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311

 Score = 75.3 bits (186), Expect = 3e-16
 Identities = 46/190 (24%), Positives = 74/190 (38%), Gaps = 46/190 (24%)

Query: 33  KPERCLDGIDMRCKVVDFGNACRA----NKQFAEEIQTRQYRAPEVILRA-GYSFSVDMW 87
           KP+  L   D   K+ DFG A RA     + +  E+ T  YRAP+V++ +  YS SVD+W
Sbjct: 146 KPQNLLINSDGALKLADFGLA-RAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIW 204

Query: 88  SFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIG-----------KMPRKIAIGG 136
           S  C   E+ TG  LF   +      D+D L  +  ++G           ++P       
Sbjct: 205 SIGCIFAEMITGKPLFPGVT------DDDQLPKIFSILGTPNPREWPQVQELP------- 251

Query: 137 AQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTA 196
                +        + R  + +                     + L  +L F P KR +A
Sbjct: 252 ----LW--------KQRTFQVFEKKPW---SSIIPGFCQEGI-DLLSNMLCFDPNKRISA 295

Query: 197 QQCLQHPWLS 206
           +  + HP+  
Sbjct: 296 RDAMNHPYFK 305

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score = 75.5 bits (185), Expect = 4e-16
 Identities = 16/175 (9%), Positives = 39/175 (22%), Gaps = 41/175 (23%)

Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILR--AGYSFSVDMWSFA 90
            P+      D R  + D     +   +         Y   E +    A ++ +++ W   
Sbjct: 221 TPDNLFIMPDGRLMLGDVSALWKVGTRGPASSVPVTYAPREFLNASTATFTHALNAWQLG 280

Query: 91  CTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLK 150
            + + +    + F   +                                       G  K
Sbjct: 281 LSIYRVWCLFLPFGLVTP-----------------------------------GIKGSWK 305

Query: 151 RIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 205
           R       +            +         +   L+F   +R    + ++ P  
Sbjct: 306 RPSLRVPGTDSLAFGSCTPLPD----FVKTLIGRFLNFDRRRRLLPLEAMETPEF 356

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288

 Score = 74.5 bits (184), Expect = 4e-16
 Identities = 46/190 (24%), Positives = 74/190 (38%), Gaps = 47/190 (24%)

Query: 33  KPERCLDGIDMRCKVVDFGNACRA----NKQFAEEIQTRQYRAPEVILRA-GYSFSVDMW 87
           KP+  L   +   K+ DFG A RA     +++  EI T  YRAP+V++ +  YS ++D+W
Sbjct: 127 KPQNLLINREGELKIADFGLA-RAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIW 185

Query: 88  SFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIG-----------KMPRKIAIGG 136
           S  C   E+  G  LF   S      + D L  +  ++G           ++P       
Sbjct: 186 SVGCIFAEMVNGTPLFPGVS------EADQLMRIFRILGTPNSKNWPNVTELP------- 232

Query: 137 AQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTA 196
            +    F  +             LD   +D               L  +L   P +R TA
Sbjct: 233 -KYDPNFTVY--EPLPWESFLKGLDESGID--------------LLSKMLKLDPNQRITA 275

Query: 197 QQCLQHPWLS 206
           +Q L+H +  
Sbjct: 276 KQALEHAYFK 285

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317

 Score = 73.8 bits (182), Expect = 9e-16
 Identities = 50/177 (28%), Positives = 77/177 (43%), Gaps = 42/177 (23%)

Query: 46  KVVDFGNACRA----NKQFAEEIQTRQYRAPEVILRA-GYSFSVDMWSFACTAFELATGD 100
           K+ DFG A RA       F+ E+ T  YRAP+V++ +  YS S+D+WS  C   E+ TG 
Sbjct: 148 KLGDFGLA-RAFGIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGK 206

Query: 101 MLFAPKSGQGFCEDEDHLALMMELIG-----------KMPRKIAIGGAQSKDYFDRHGDL 149
            LF   +      DE+ L L+ +++G           K+P+       +           
Sbjct: 207 PLFPGTN------DEEQLKLIFDIMGTPNESLWPSVTKLPKYNPNIQQRPPRDLR----- 255

Query: 150 KRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLS 206
           + ++      LD  L+D              FL  LL   P+ R +A+Q L HPW +
Sbjct: 256 QVLQPHTKEPLDGNLMD--------------FLHGLLQLNPDMRLSAKQALHHPWFA 298

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292

 Score = 73.3 bits (181), Expect = 1e-15
 Identities = 46/167 (27%), Positives = 70/167 (41%), Gaps = 26/167 (15%)

Query: 46  KVVDFGNACRA----NKQFAEEIQTRQYRAPEVILRA-GYSFSVDMWSFACTAFELAT-G 99
           K+ +FG A RA     + ++ E+ T  YR P+V+  A  YS S+DMWS  C   ELA  G
Sbjct: 141 KLANFGLA-RAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAG 199

Query: 100 DMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWS 159
             LF           +D L  +  L+G    +      +  DY          +    + 
Sbjct: 200 RPLFPGND------VDDQLKRIFRLLGTPTEEQWPSMTKLPDY----------KPYPMYP 243

Query: 160 LDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLS 206
               LV+         R+  + L   L   P +R +A++ LQHP+ S
Sbjct: 244 ATTSLVNVVPKLNATGRDLLQNL---LKCNPVQRISAEEALQHPYFS 287

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324

 Score = 73.0 bits (180), Expect = 2e-15
 Identities = 41/171 (23%), Positives = 71/171 (41%), Gaps = 34/171 (19%)

Query: 46  KVVDFGNACRA----NKQFAEEIQTRQYRAPEVILRA-GYSFSVDMWSFACTAFELATGD 100
           K+ DFG A RA     K +  E+ T  YR P+++L +  YS  +DMW   C  +E+ATG 
Sbjct: 140 KLADFGLA-RAKSIPTKTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGR 198

Query: 101 MLFAPKSGQGFCEDEDHLALMMELIG-----KMPRKIAIGGAQSKDYFDRHGDLKRIRRL 155
            LF   +       E+ L  +  ++G       P     G   ++++        +    
Sbjct: 199 PLFPGST------VEEQLHFIFRILGTPTEETWP-----GILSNEEF--------KTYNY 239

Query: 156 KFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLS 206
             +  + LL       ++D  +       LL F    R +A+  ++HP+  
Sbjct: 240 PKYRAEALL-SHAPRLDSDGADLLTK---LLQFEGRNRISAEDAMKHPFFL 286

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405

 Score = 72.5 bits (178), Expect = 4e-15
 Identities = 41/182 (22%), Positives = 70/182 (38%), Gaps = 36/182 (19%)

Query: 46  KVVDFGNA------CRANKQFAEEIQTRQYRAPEVILRAG-YSFSVDMWSFACTAFELAT 98
           K+ D G A       +        + T  YRAPE++L A  Y+ ++D+W+  C   EL T
Sbjct: 172 KIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLT 231

Query: 99  GDMLFAPKS---GQGFCEDEDHLALMMELIG-----------KMPRKIAIGGAQSKDYFD 144
            + +F  +            D L  +  ++G           KMP              +
Sbjct: 232 SEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMP--------------E 277

Query: 145 RHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPW 204
               +K  RR  + +   +   +    + D++ F   L  LL   P KR T++Q +Q P+
Sbjct: 278 HSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAF-HLLQKLLTMDPIKRITSEQAMQDPY 336

Query: 205 LS 206
             
Sbjct: 337 FL 338

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score = 72.2 bits (177), Expect = 5e-15
 Identities = 34/168 (20%), Positives = 60/168 (35%), Gaps = 17/168 (10%)

Query: 45  CKVVDFGNACRANKQFAEE-IQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLF 103
            K+ DFG + +     A   + TR Y +PE +    YS   D+WS   +  E+A G    
Sbjct: 171 IKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 230

Query: 104 APKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRL 163
            P       + ++   +    +     +            ++ G   R     F  LD +
Sbjct: 231 PP------PDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKFGMDSRPPMAIFELLDYI 284

Query: 164 ------LVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 205
                  +    FS     EF +F+   L   P +R   +Q + H ++
Sbjct: 285 VNEPPPKLPSGVFSL----EFQDFVNKCLIKNPAERADLKQLMVHAFI 328

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score = 72.1 bits (177), Expect = 5e-15
 Identities = 25/180 (13%), Positives = 44/180 (24%), Gaps = 55/180 (30%)

Query: 39  DGIDMRCKVVDFGNACRANKQFAEEIQTRQ--------YRAPEVILRAGYSFSVDMWSFA 90
           DG      + DFG+A         +             + APEV++       VD+WS  
Sbjct: 186 DGSR--AALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSC 243

Query: 91  CTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLK 150
           C    +  G   +                L +  I   P              +      
Sbjct: 244 CMMLHMLNGCHPWT---------QYFRGPLCL-KIASEP----------PPIREIPPSC- 282

Query: 151 RIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNS 210
                               +       A+ +   L   P  R +A +  +    +L+  
Sbjct: 283 --------------------AP----LTAQAIQEGLRKEPVHRASAMELRRKVGKALQEV 318

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score = 72.2 bits (177), Expect = 6e-15
 Identities = 33/184 (17%), Positives = 55/184 (29%), Gaps = 34/184 (18%)

Query: 44  RCKVVDFGNACRANKQFAEEIQTRQYR--------------APEVILR--AGYSFSVDMW 87
           +  +    +            Q ++                +PEV+ +   GY    D++
Sbjct: 166 KVYLSGLRSNL----SMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIY 221

Query: 88  SFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPR------KIAIGGAQSKD 141
           S   TA ELA G     P     F +      L+ +L G +P         A     S  
Sbjct: 222 SVGITACELANGH---VP-----FKDMPATQMLLEKLNGTVPCLLDTSTIPAEELTMSPS 273

Query: 142 YFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ 201
               +  L                  + +  T +  F  F+   L   P+ RP+A   L 
Sbjct: 274 RSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLN 333

Query: 202 HPWL 205
           H + 
Sbjct: 334 HSFF 337

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346

 Score = 70.7 bits (174), Expect = 2e-14
 Identities = 43/169 (25%), Positives = 62/169 (36%), Gaps = 36/169 (21%)

Query: 46  KVVDFGNACRA----NKQFAEEIQTRQYRAPEVILRA-GYSFSVDMWSFACTAFELATGD 100
           K+ DFG A ++    N+ +  ++ TR YRAPE++  A  Y   VDMW+  C   EL    
Sbjct: 152 KLADFGLA-KSFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRV 210

Query: 101 MLFAPKSGQGFCEDEDHLALMMELIG-----KMPRKIAIGGAQSKDYFDRHGDLKRIRRL 155
                 S      D D L  + E +G     + P           DY             
Sbjct: 211 PFLPGDS------DLDQLTRIFETLGTPTEEQWP-----DMCSLPDY----------VTF 249

Query: 156 KFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPW 204
           K +    L    + FS        + +  L  F P  R TA Q L+  +
Sbjct: 250 KSFPGIPL---HHIFSAAGDDLL-DLIQGLFLFNPCARITATQALKMKY 294

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score = 70.9 bits (173), Expect = 2e-14
 Identities = 41/180 (22%), Positives = 64/180 (35%), Gaps = 29/180 (16%)

Query: 33  KPERCL---DGIDMRCKVVDFG--NACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMW 87
           KPE  +       +  K++D G        +   E + T QY APE++ +  Y+ +VD W
Sbjct: 148 KPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYW 207

Query: 88  SFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHG 147
           SF   AFE  TG   F P     F  +   +    ++  K    I +       Y D  G
Sbjct: 208 SFGTLAFECITG---FRP-----FLPNWQPVQWHGKVREKSNEHIVV-------YDDLTG 252

Query: 148 DLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSL 207
            +K    L   +           S   A +   +L  +L +   +R T  Q         
Sbjct: 253 AVKFSSVLPTPN---------HLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQA 303

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score = 69.7 bits (171), Expect = 3e-14
 Identities = 38/175 (21%), Positives = 59/175 (33%), Gaps = 52/175 (29%)

Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQ--TRQYRAPEVILRAGYSFSVDMWSFA 90
           KP     G   RCK+ DFG         A E+Q    +Y APE+ L+  Y  + D++S  
Sbjct: 184 KPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQEGDPRYMAPEL-LQGSYGTAADVFSLG 242

Query: 91  CTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLK 150
            T  E+A    +  P  G+                                        +
Sbjct: 243 LTILEVACN--MELPHGGE--------------------------------------GWQ 262

Query: 151 RIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 205
           ++R+               F+   + E    LV +L+  P+ R TA+  L  P L
Sbjct: 263 QLRQGYL---------PPEFTAGLSSELRSVLVMMLEPDPKLRATAEALLALPVL 308

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score = 70.1 bits (172), Expect = 3e-14
 Identities = 47/198 (23%), Positives = 71/198 (35%), Gaps = 52/198 (26%)

Query: 33  KPERCL---DGIDMRCKVVDFGNAC--RANKQFAEEIQTRQYRAPEVILRAGYSFSVDMW 87
           KPE  L      D   K+VDFG +      K+  E + T  Y APEV LR  Y    D+W
Sbjct: 163 KPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEV-LRKKYDEKCDVW 221

Query: 88  SFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDY-FDRH 146
           S     F L  G   F  ++ Q           ++  +            +   Y FD  
Sbjct: 222 SIGVILFILLAGYPPFGGQTDQE----------ILRKV------------EKGKYTFDS- 258

Query: 147 GDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLS 206
                      W            SE  A+   + +  +L F  ++R +AQQ L+HPW+ 
Sbjct: 259 ---------PEWK---------NVSE-GAK---DLIKQMLQFDSQRRISAQQALEHPWIK 296

Query: 207 LRNSTRDETKNKSNVEKV 224
              S ++      ++   
Sbjct: 297 EMCSKKESGIELPSLANA 314

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score = 68.9 bits (169), Expect = 4e-14
 Identities = 25/169 (14%), Positives = 52/169 (30%), Gaps = 47/169 (27%)

Query: 38  LDGIDMRCKVVDFGNACRANKQFAEEIQ-TRQYRAPEVILRAGYSFSVDMWSFACTAFEL 96
           + G     K+ D G A      FA+ +  T ++ APE+     Y  SVD+++F     E+
Sbjct: 164 ITGPTGSVKIGDLGLATLKRASFAKAVIGTPEFMAPEMY-EEKYDESVDVYAFGMCMLEM 222

Query: 97  ATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLK 156
           AT +  ++         +  + A +   +    +  +                       
Sbjct: 223 ATSEYPYS---------ECQNAAQIYRRVTSGVKPASFDKVAIP---------------- 257

Query: 157 FWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 205
                               E  E +   +    ++R + +  L H + 
Sbjct: 258 --------------------EVKEIIEGCIRQNKDERYSIKDLLNHAFF 286

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score = 68.1 bits (167), Expect = 8e-14
 Identities = 26/175 (14%), Positives = 45/175 (25%), Gaps = 54/175 (30%)

Query: 42  DMRCKVVDFGNACRANK--QFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATG 99
             + K+ DFG         +      T +Y +PE I    Y   VD+++      EL   
Sbjct: 158 TKQVKIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHV 217

Query: 100 DMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWS 159
                                                      F+       +R      
Sbjct: 218 ---------------------------------------CDTAFETSKFFTDLRDGIISD 238

Query: 160 LDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNSTRDE 214
                     F     ++    L  LL   PE RP   + L+   +  ++  ++E
Sbjct: 239 ---------IFD----KKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSPEKNE 280

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score = 67.6 bits (166), Expect = 1e-13
 Identities = 42/192 (21%), Positives = 66/192 (34%), Gaps = 49/192 (25%)

Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEI-QTRQYRAPEVILRAGYSFSVDMWSFAC 91
           KPE  L G     K+ DFG +  A      ++  T  Y  PE+I    +   VD+WS   
Sbjct: 136 KPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 195

Query: 92  TAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKR 151
             +E   G     P     F E   +                                KR
Sbjct: 196 LCYEFLVG---KPP-----F-EANTYQETY----------------------------KR 218

Query: 152 IRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNST 211
           I R+           ++ F +       + +  LL   P +RP  ++ L+HPW++  +S 
Sbjct: 219 ISRV-----------EFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSK 267

Query: 212 RDETKNKSNVEK 223
               +NK +  K
Sbjct: 268 PSNCQNKESASK 279

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score = 68.1 bits (166), Expect = 1e-13
 Identities = 22/184 (11%), Positives = 42/184 (22%), Gaps = 64/184 (34%)

Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAG-----------YS 81
           +P   +        +  F +  R          +R +  PE+  R              +
Sbjct: 233 RPVDIVLDQRGGVFLTGFEHLVRDGA-RVVSSVSRGFEPPELEARRATISYHRDRRTLMT 291

Query: 82  FSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKD 141
           FS D W+     + +   D+             +D      E I +  + I     +   
Sbjct: 292 FSFDAWALGLVIYWIWCADLPI----------TKDAALGGSEWIFRSCKNIP-QPVR--- 337

Query: 142 YFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ 201
                  L  +                                 L +  E R    Q ++
Sbjct: 338 ------AL--LEG------------------------------FLRYPKEDRLLPLQAME 359

Query: 202 HPWL 205
            P  
Sbjct: 360 TPEY 363

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score = 68.0 bits (166), Expect = 2e-13
 Identities = 41/191 (21%), Positives = 60/191 (31%), Gaps = 35/191 (18%)

Query: 33  KPE-----RCLDGIDMRCKVVDFG--NACRANKQFAEEIQTRQYRAPEVILRA------- 78
           KP         DG     K+ DFG       ++QF     T +Y  P++  RA       
Sbjct: 139 KPGNIMRVIGEDG-QSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQ 197

Query: 79  -GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGA 137
             Y  +VD+WS   T +  ATG + F P  G        +  +M ++I   P      GA
Sbjct: 198 KKYGATVDLWSIGVTFYHAATGSLPFRPFEGP-----RRNKEVMYKIITGKPS-----GA 247

Query: 138 QSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQ 197
            S      +G +     +               S          L  +L+   EK     
Sbjct: 248 ISGVQKAENGPIDWSGDMPVSC---------SLSRGLQVLLTPVLANILEADQEKCWGFD 298

Query: 198 QCLQHPWLSLR 208
           Q        L 
Sbjct: 299 QFFAETSDILH 309

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score = 66.6 bits (163), Expect = 5e-13
 Identities = 42/210 (20%), Positives = 75/210 (35%), Gaps = 57/210 (27%)

Query: 33  KPERCL---DGIDMRCKVVDFGNAC--RANKQFAEEIQTRQYRAPEVILRAGYSFSVDMW 87
           KPE  L       +  K+VDFG +     + +  + + T  Y APEV L+  Y+   D+W
Sbjct: 173 KPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEV-LKKKYNEKCDVW 231

Query: 88  SFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDY-FDRH 146
           S     + L  G   F  ++ Q           +++ +            +   Y FD  
Sbjct: 232 SCGVIMYILLCGYPPFGGQNDQD----------IIKKV------------EKGKYYFDF- 268

Query: 147 GDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLS 206
                      W            S+ +A+   E +  +L +   KR TA++ L   W+ 
Sbjct: 269 ---------NDWK---------NISD-EAK---ELIKLMLTYDYNKRCTAEEALNSRWIK 306

Query: 207 LRNSTRDETKNKSNVEKVD-----VGMSKL 231
              +  +++  K+    +       G  KL
Sbjct: 307 KYANNINKSDQKTLCGALSNMRKFEGSQKL 336

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score = 64.7 bits (158), Expect = 1e-12
 Identities = 38/191 (19%), Positives = 61/191 (31%), Gaps = 53/191 (27%)

Query: 17  ANISI-RRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVI 75
           +NI I R +          E       +  K+ D G+  R +    EE    ++ A EV+
Sbjct: 144 SNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVEE-GDSRFLANEVL 202

Query: 76  L-RAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAI 134
                +    D+++ A T    A  + L                       G    +I  
Sbjct: 203 QENYTHLPKADIFALALTVVCAAGAEPLPRN--------------------GDQWHEI-- 240

Query: 135 GGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRP 194
                     R G L RI +                S+    EF E L  ++   PE+RP
Sbjct: 241 ----------RQGRLPRIPQ--------------VLSQ----EFTELLKVMIHPDPERRP 272

Query: 195 TAQQCLQHPWL 205
           +A   ++H  L
Sbjct: 273 SAMALVKHSVL 283

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score = 65.2 bits (159), Expect = 1e-12
 Identities = 31/188 (16%), Positives = 63/188 (33%), Gaps = 60/188 (31%)

Query: 33  KPERCL-----DGIDMRCKVVDFGNACR------ANKQFAEEIQTRQYRAPEVI---LRA 78
           KP   L         ++  + DFG   +      +  + +    T  + APE++    + 
Sbjct: 145 KPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKE 204

Query: 79  GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQ 138
             +++VD++S  C  + + +            F +     A    L+G            
Sbjct: 205 NPTYTVDIFSAGCVFYYVISEGSHP-------FGKSLQRQA--NILLGA----------- 244

Query: 139 SKDYFDRHGDLKRIRRLKFWSLD-RLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQ 197
                     L  +   K   +  R L++K                 ++   P+KRP+A+
Sbjct: 245 --------CSLDCLHPEKHEDVIARELIEK-----------------MIAMDPQKRPSAK 279

Query: 198 QCLQHPWL 205
             L+HP+ 
Sbjct: 280 HVLKHPFF 287

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score = 64.9 bits (158), Expect = 2e-12
 Identities = 35/179 (19%), Positives = 55/179 (30%), Gaps = 64/179 (35%)

Query: 42  DMRCKVVDFGNAC---------------RANKQFAEEIQTRQYRAPEVILRAGYSFSVDM 86
           D   KV DFG                   A      ++ T+ Y +PE I    YS  VD+
Sbjct: 200 DDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSPEQIHGNNYSHKVDI 259

Query: 87  WSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRH 146
           +S     FE     +L++  +              ME                     R 
Sbjct: 260 FSLGLILFE-----LLYSFSTQ-------------ME---------------------RV 280

Query: 147 GDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 205
             +  +R LKF     L   KY        +    +  +L  +P +RP A   +++   
Sbjct: 281 RIITDVRNLKF---PLLFTQKY-------PQEHMMVQDMLSPSPTERPEATDIIENAIF 329

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score = 65.1 bits (159), Expect = 2e-12
 Identities = 42/210 (20%), Positives = 71/210 (33%), Gaps = 57/210 (27%)

Query: 33  KPERCL---DGIDMRCKVVDFGNAC--RANKQFAEEIQTRQYRAPEVILRAGYSFSVDMW 87
           KPE  L      D   +++DFG +    A+K+  ++I T  Y APEV L   Y    D+W
Sbjct: 153 KPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEV-LHGTYDEKCDVW 211

Query: 88  SFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDY-FDRH 146
           S     + L +G   F   +             +++ +            +   Y F+  
Sbjct: 212 STGVILYILLSGCPPFNGANEYD----------ILKKV------------EKGKYTFEL- 248

Query: 147 GDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLS 206
                      W          + SE  A+   + +  +L + P  R +A+  L H W+ 
Sbjct: 249 ---------PQWK---------KVSE-SAK---DLIRKMLTYVPSMRISARDALDHEWIQ 286

Query: 207 LRNSTRDETKNKSNVEKVD-----VGMSKL 231
                +      S    +       G  KL
Sbjct: 287 TYTKEQISVDVPSLDNAILNIRQFQGTQKL 316

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score = 64.3 bits (157), Expect = 3e-12
 Identities = 32/179 (17%), Positives = 53/179 (29%), Gaps = 50/179 (27%)

Query: 33  KPERCLDGIDMRCKVVDFGNAC--RANKQFAEEIQ-TRQYRAPEVILRAGYSFSVDMWSF 89
           K +      D   ++ DFG A    +  + A     T  Y +PE+     Y+   D+W+ 
Sbjct: 152 KSQNIFLTKDGTVQLGDFGIARVLNSTVELARACIGTPYYLSPEICENKPYNNKSDIWAL 211

Query: 90  ACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDL 149
            C  +EL T    F   S             M  L+     KI              G  
Sbjct: 212 GCVLYELCTLKHAFEAGS-------------MKNLV----LKI------------ISGSF 242

Query: 150 KRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLR 208
             +                 +S     +    +  L    P  RP+    L+  +++ R
Sbjct: 243 PPV--------------SLHYSY----DLRSLVSQLFKRNPRDRPSVNSILEKGFIAKR 283

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score = 63.5 bits (155), Expect = 3e-12
 Identities = 43/170 (25%), Positives = 63/170 (37%), Gaps = 49/170 (28%)

Query: 46  KVVDFG-NACRANKQFAEEIQTRQ-------YRAPEVILRA-GYSFSVDMWSFACTAFEL 96
           ++ DFG +A  A        + R+       + APEV+ +  GY F  D+WSF  TA EL
Sbjct: 161 QIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIEL 220

Query: 97  ATGDMLFAPKSGQGFCEDEDHL-ALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRL 155
           ATG    AP            +  LM+ L    P                   ++    L
Sbjct: 221 ATGA---APYH------KYPPMKVLMLTLQNDPPS--------------LETGVQDKEML 257

Query: 156 KFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 205
           K +                 + F + +   L   PEKRPTA + L+H + 
Sbjct: 258 KKYG----------------KSFRKMISLCLQKDPEKRPTAAELLRHKFF 291

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351

 Score = 63.8 bits (156), Expect = 4e-12
 Identities = 34/171 (19%), Positives = 64/171 (37%), Gaps = 28/171 (16%)

Query: 46  KVVDFGNACRA--------NKQFAEEIQTRQYRAPEVILRA-GYSFSVDMWSFACTAFEL 96
           K+ DFG A RA          ++   + T  YR PE++L    Y   +D+W   C   E+
Sbjct: 164 KLADFGLA-RAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEM 222

Query: 97  ATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLK 156
            T   +    +      ++  LAL+ +L G            + + +    + +   +L+
Sbjct: 223 WTRSPIMQGNT------EQHQLALISQLCG-SI---------TPEVWPNVDNYELYEKLE 266

Query: 157 FW-SLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLS 206
                 R + D+ +    D     + +  LL   P +R  +   L H +  
Sbjct: 267 LVKGQKRKVKDRLKAYVRDPYAL-DLIDKLLVLDPAQRIDSDDALNHDFFW 316

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score = 63.6 bits (155), Expect = 5e-12
 Identities = 48/198 (24%), Positives = 75/198 (37%), Gaps = 52/198 (26%)

Query: 33  KPERCL---DGIDMRCKVVDFGNAC--RANKQFAEEIQTRQYRAPEVILRAGYSFSVDMW 87
           KPE  L      D   K++DFG +   + N +  + I T  Y APEV LR  Y    D+W
Sbjct: 148 KPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEV-LRGTYDEKCDVW 206

Query: 88  SFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDY-FDRH 146
           S     + L +G   F  K+             +++ +            ++  Y FD  
Sbjct: 207 SAGVILYILLSGTPPFYGKNEYD----------ILKRV------------ETGKYAFDL- 243

Query: 147 GDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLS 206
                      W            S+ DA+   + +  +L F P  R TA QCL+HPW+ 
Sbjct: 244 ---------PQWR---------TISD-DAK---DLIRKMLTFHPSLRITATQCLEHPWIQ 281

Query: 207 LRNSTRDETKNKSNVEKV 224
             +S      +  ++E  
Sbjct: 282 KYSSETPTISDLPSLESA 299

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score = 62.7 bits (152), Expect = 1e-11
 Identities = 13/93 (13%), Positives = 33/93 (35%), Gaps = 16/93 (17%)

Query: 33  KPERCL-----------DGIDMRCKVVDFGNAC-----RANKQFAEEIQTRQYRAPEVIL 76
           KP+  +           D +     ++D G +           F  + +T  ++  E++ 
Sbjct: 199 KPDNFILGNGFLEQDDEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLS 258

Query: 77  RAGYSFSVDMWSFACTAFELATGDMLFAPKSGQ 109
              +++ +D +  A T + +  G  +     G 
Sbjct: 259 NKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGG 291

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score = 62.0 bits (151), Expect = 1e-11
 Identities = 33/197 (16%), Positives = 57/197 (28%), Gaps = 64/197 (32%)

Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQ-----------------TRQYRAPEVI 75
           KP           K+ DFG A   ++                        T  Y A EV+
Sbjct: 143 KPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVL 202

Query: 76  LRAG-YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAI 134
              G Y+  +DM+S     FE+              F    + + ++             
Sbjct: 203 DGTGHYNEKIDMYSLGIIFFEMIYP-----------FSTGMERVNIL------------- 238

Query: 135 GGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRP 194
                          K++R +              F +   +   + +  L+D  P KRP
Sbjct: 239 ---------------KKLRSVSI-EFPP------DFDDNKMKVEKKIIRLLIDHDPNKRP 276

Query: 195 TAQQCLQHPWLSLRNST 211
            A+  L   WL +++  
Sbjct: 277 GARTLLNSGWLPVKHQD 293

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score = 61.5 bits (150), Expect = 2e-11
 Identities = 39/176 (22%), Positives = 60/176 (34%), Gaps = 50/176 (28%)

Query: 33  KPERCLDGIDMRCKVVDFG--NACRANKQFAE-EIQTRQYRAPEVILRAGYSFSVDMWSF 89
           KP           K+ DFG       +  FA+  + T  Y +PE + R  Y+   D+WS 
Sbjct: 143 KPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSL 202

Query: 90  ACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDL 149
            C  +EL      F   S               EL GK                      
Sbjct: 203 GCLLYELCALMPPFTAFS-------------QKELAGK---------------------- 227

Query: 150 KRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 205
             IR  KF  +        R+S+    E  E +  +L+     RP+ ++ L++P +
Sbjct: 228 --IREGKFRRIPY------RYSD----ELNEIITRMLNLKDYHRPSVEEILENPLI 271

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score = 61.6 bits (150), Expect = 2e-11
 Identities = 32/167 (19%), Positives = 52/167 (31%), Gaps = 55/167 (32%)

Query: 46  KVVDFGNACRANKQFAEEIQTRQ-------YRAPEVILRAGYSFSVDMWSFACTAFELAT 98
           K+ D G      + F+ +            Y +PE I   GY+F  D+WS  C  +E+A 
Sbjct: 176 KLGDLGLG----RFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAA 231

Query: 99  GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFW 158
               F       + +  +  +L                             K+I +  + 
Sbjct: 232 LQSPF-------YGDKMNLYSLC----------------------------KKIEQCDY- 255

Query: 159 SLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 205
               L  D Y  SE    E  + +   ++  PEKRP           
Sbjct: 256 --PPLPSDHY--SE----ELRQLVNMCINPDPEKRPDVTYVYDVAKR 294

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score = 60.2 bits (147), Expect = 4e-11
 Identities = 30/176 (17%), Positives = 49/176 (27%), Gaps = 53/176 (30%)

Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTR----QYRAPEVILRAGYSFSVDMWS 88
                L   +M  K+ DFG A +      E+  T      Y +PE+  R+ +    D+WS
Sbjct: 139 TLSNLLLTRNMNIKIADFGLATQLKMP-HEKHYTLCGTPNYISPEIATRSAHGLESDVWS 197

Query: 89  FACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGD 148
             C  + L  G   F         + +                                 
Sbjct: 198 LGCMFYTLLIGRPPF---------DTDTVKNT---------------------------- 220

Query: 149 LKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPW 204
           L ++               Y      + E  + +  LL   P  R +    L HP+
Sbjct: 221 LNKVVLA-----------DYEMPSFLSIEAKDLIHQLLRRNPADRLSLSSVLDHPF 265

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score = 60.4 bits (147), Expect = 4e-11
 Identities = 32/206 (15%), Positives = 67/206 (32%), Gaps = 62/206 (30%)

Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQ-----YRAPEVIL----------- 76
           KP   L  +D   K++DFG A +        ++  Q     Y  PE I            
Sbjct: 154 KPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKS 212

Query: 77  RAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGG 136
           ++  S   D+WS  C  + +  G     P     F +  + ++ +  +I           
Sbjct: 213 KSKISPKSDVWSLGCILYYMTYG---KTP-----FQQIINQISKLHAII----------- 253

Query: 137 AQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTA 196
               ++                        +  F +   ++  + L   L   P++R + 
Sbjct: 254 --DPNH------------------------EIEFPDIPEKDLQDVLKCCLKRDPKQRISI 287

Query: 197 QQCLQHPWLSLRNSTRDETKNKSNVE 222
            + L HP++ ++    ++    +  E
Sbjct: 288 PELLAHPYVQIQTHPVNQMAKGTTEE 313

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score = 60.3 bits (147), Expect = 4e-11
 Identities = 33/173 (19%), Positives = 52/173 (30%), Gaps = 49/173 (28%)

Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEI-QTRQYRAPEVILRAGYSFSVDMWSFAC 91
           KPE  L G     K+ DFG +  A       +  T  Y  PE+I    +   VD+W    
Sbjct: 141 KPENLLMGYKGELKIADFGWSVHAPSLRRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGV 200

Query: 92  TAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKR 151
             +E   G     P     F +   H                                +R
Sbjct: 201 LCYEFLVG---MPP-----F-DSPSHTETH----------------------------RR 223

Query: 152 IRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPW 204
           I  +             +F    +    + +  LL + P +R   +  ++HPW
Sbjct: 224 IVNV-----------DLKFPPFLSDGSKDLISKLLRYHPPQRLPLKGVMEHPW 265

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score = 60.0 bits (146), Expect = 6e-11
 Identities = 20/73 (27%), Positives = 29/73 (39%), Gaps = 1/73 (1%)

Query: 33  KPERCL-DGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFAC 91
           KP   L        K+ DFG AC           +  + APEV   + YS   D++S+  
Sbjct: 132 KPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGI 191

Query: 92  TAFELATGDMLFA 104
             +E+ T    F 
Sbjct: 192 ILWEVITRRKPFD 204

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score = 60.2 bits (146), Expect = 7e-11
 Identities = 35/182 (19%), Positives = 63/182 (34%), Gaps = 64/182 (35%)

Query: 42  DMRCKVVDFGNACRANKQFAEEIQTRQ-----------YRAPEVIL-------RAGYSFS 83
           ++R  + DFG      K+      + +           +RAPE++        +   + S
Sbjct: 164 NLRILISDFGLC----KKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRS 219

Query: 84  VDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYF 143
           +D++S  C  + + +                           GK P            + 
Sbjct: 220 IDIFSMGCVFYYILSK--------------------------GKHP------------FG 241

Query: 144 DRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHP 203
           D++     I R  F SLD +   K     +   E  + +  ++D  P KRPTA + L+HP
Sbjct: 242 DKYSRESNIIRGIF-SLDEM---KCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHP 297

Query: 204 WL 205
             
Sbjct: 298 LF 299

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score = 59.9 bits (146), Expect = 7e-11
 Identities = 35/176 (19%), Positives = 53/176 (30%), Gaps = 53/176 (30%)

Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTR----QYRAPEVILRAGYSFSVDMWS 88
           K        D+  K+ DFG A +  +   E  +       Y APEV+ + G+SF VD+WS
Sbjct: 142 KLGNLFLNEDLEVKIGDFGLATKV-EYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWS 200

Query: 89  FACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGD 148
             C  + L  G   F         E                                   
Sbjct: 201 IGCIMYTLLVGKPPF---------ETSCLKET---------------------------- 223

Query: 149 LKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPW 204
             RI++            +Y   +      A  +  +L   P  RPT  + L   +
Sbjct: 224 YLRIKKN-----------EYSIPKHINPVAASLIQKMLQTDPTARPTINELLNDEF 268

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score = 60.0 bits (146), Expect = 8e-11
 Identities = 35/176 (19%), Positives = 52/176 (29%), Gaps = 53/176 (30%)

Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTR----QYRAPEVILRAGYSFSVDMWS 88
           K        D+  K+ DFG A +      E  +       Y APEV+ + G+SF VD+WS
Sbjct: 168 KLGNLFLNEDLEVKIGDFGLATKVEYD-GERKKVLCGTPNYIAPEVLSKKGHSFEVDVWS 226

Query: 89  FACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGD 148
             C  + L  G   F         E                                   
Sbjct: 227 IGCIMYTLLVGKPPF---------ETSCLKET---------------------------- 249

Query: 149 LKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPW 204
             RI++            +Y   +      A  +  +L   P  RPT  + L   +
Sbjct: 250 YLRIKKN-----------EYSIPKHINPVAASLIQKMLQTDPTARPTINELLNDEF 294

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score = 59.4 bits (144), Expect = 1e-10
 Identities = 31/203 (15%), Positives = 60/203 (29%), Gaps = 62/203 (30%)

Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQ-----YRAPEVIL----------- 76
           KP   L  +D   K++DFG A +        ++  Q     Y  PE I            
Sbjct: 182 KPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKS 240

Query: 77  RAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGG 136
           ++  S   D+WS  C  + +  G   F              +   +              
Sbjct: 241 KSKISPKSDVWSLGCILYYMTYGKTPF------------QQIINQISK------------ 276

Query: 137 AQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTA 196
                       L  I              +  F +   ++  + L   L   P++R + 
Sbjct: 277 ------------LHAIIDPNH---------EIEFPDIPEKDLQDVLKCCLKRDPKQRISI 315

Query: 197 QQCLQHPWLSLRNSTRDETKNKS 219
            + L HP++ ++    ++    +
Sbjct: 316 PELLAHPYVQIQTHPVNQMAKGT 338

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score = 58.9 bits (143), Expect = 2e-10
 Identities = 31/203 (15%), Positives = 66/203 (32%), Gaps = 62/203 (30%)

Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQ-----YRAPEVIL----------- 76
           KP   L  +D   K++DFG A +        ++  Q     Y  PE I            
Sbjct: 135 KPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKS 193

Query: 77  RAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGG 136
           ++  S   D+WS  C  + +  G     P     F +  + ++ +  +I           
Sbjct: 194 KSKISPKSDVWSLGCILYYMTYG---KTP-----FQQIINQISKLHAII----------- 234

Query: 137 AQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTA 196
               ++                        +  F +   ++  + L   L   P++R + 
Sbjct: 235 --DPNH------------------------EIEFPDIPEKDLQDVLKCCLKRDPKQRISI 268

Query: 197 QQCLQHPWLSLRNSTRDETKNKS 219
            + L HP++ ++    ++    +
Sbjct: 269 PELLAHPYVQIQTHPVNQMAKGT 291

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score = 58.7 bits (142), Expect = 2e-10
 Identities = 39/203 (19%), Positives = 61/203 (30%), Gaps = 64/203 (31%)

Query: 33  KPERCL--DGIDMRCKVVDFGNACRANKQFAEEIQ-------TRQYRAPEVILRAG--YS 81
           KPE  L         K+VDFG +    K    E         T  + APEV+      Y 
Sbjct: 195 KPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYG 254

Query: 82  FSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKD 141
              D WS       L  G + F            +    +         ++       K 
Sbjct: 255 PKCDAWSAGVLLHLLLMGAVPF---------PGVNDADTI--------SQVLNK----KL 293

Query: 142 YFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ 201
            F+             ++           S   AR+    L  LL+   ++R  A + LQ
Sbjct: 294 CFEN----------PNYN---------VLSP-LARDL---LSNLLNRNVDERFDAMRALQ 330

Query: 202 HPWLSLRNSTRDETKNKSNVEKV 224
           HPW+         ++    + K+
Sbjct: 331 HPWI---------SQFSDKIYKM 344

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score = 58.5 bits (142), Expect = 2e-10
 Identities = 34/179 (18%), Positives = 53/179 (29%), Gaps = 64/179 (35%)

Query: 42  DMRCKVVDFGNACRANKQFAEEIQ---------------TRQYRAPEVILRAGYSFSVDM 86
           D   KV DFG     ++   E+                 T+ Y +PE I    YS  VD+
Sbjct: 154 DDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDI 213

Query: 87  WSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRH 146
           +S     FE     +L+   +                                    +R 
Sbjct: 214 FSLGLILFE-----LLYPFSTQ----------------------------------MERV 234

Query: 147 GDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 205
             L  +R LKF     L   KY             +  +L  +P +RP A   +++   
Sbjct: 235 RTLTDVRNLKF---PPLFTQKY-------PCEYVMVQDMLSPSPMERPEAINIIENAVF 283

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score = 58.6 bits (142), Expect = 3e-10
 Identities = 43/192 (22%), Positives = 64/192 (33%), Gaps = 57/192 (29%)

Query: 33  KPERCL---DGIDMRCKVVDFG--NACRANKQFAEEIQTRQYRAPEVI---LRAGYSFSV 84
           KPE  L      D   K+ DFG                T  Y APEV+     AGY+ +V
Sbjct: 266 KPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAV 325

Query: 85  DMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQ-SKDYF 143
           D WS     F   +G   + P     F E    ++L          +I  G      + +
Sbjct: 326 DCWSLGVILFICLSG---YPP-----FSEHRTQVSLK--------DQITSGKYNFIPEVW 369

Query: 144 DRHGDLKR--IRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ 201
               +     +++L       L+VD                       P+ R T ++ L+
Sbjct: 370 AEVSEKALDLVKKL-------LVVD-----------------------PKARFTTEEALR 399

Query: 202 HPWLSLRNSTRD 213
           HPWL   +  R 
Sbjct: 400 HPWLQDEDMKRK 411

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score = 58.1 bits (141), Expect = 3e-10
 Identities = 40/181 (22%), Positives = 65/181 (35%), Gaps = 56/181 (30%)

Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQ-------YRAPEVILRAGYSFSVD 85
           K +  L  +D R K+ DFG       Q ++++  R+       + APEVI R+ Y+  VD
Sbjct: 168 KSDSILLTLDGRVKLSDFGFC----AQISKDVPKRKSLVGTPYWMAPEVISRSLYATEVD 223

Query: 86  MWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDR 145
           +WS      E+  G+    P          D     M+ +   P                
Sbjct: 224 IWSLGIMVIEMVDGE---PPYF-------SDSPVQAMKRLRDSPP--------------- 258

Query: 146 HGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 205
                +++     S                    +FL  +L   P++R TAQ+ L HP+L
Sbjct: 259 ----PKLKNSHKVS----------------PVLRDFLERMLVRDPQERATAQELLDHPFL 298

Query: 206 S 206
            
Sbjct: 299 L 299

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score = 58.1 bits (141), Expect = 3e-10
 Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 5/67 (7%)

Query: 38  LDGIDMRCKVVDFGNACRANKQFAEEIQ---TRQYRAPEVILRA--GYSFSVDMWSFACT 92
           ++      K+ DFG + R             T QY APE+I +   GY  + D+WS  CT
Sbjct: 155 INTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCT 214

Query: 93  AFELATG 99
             E+ATG
Sbjct: 215 IIEMATG 221

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score = 57.3 bits (139), Expect = 5e-10
 Identities = 40/181 (22%), Positives = 60/181 (33%), Gaps = 56/181 (30%)

Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQ-------YRAPEVILRAGYSFSVD 85
           K +  L G+D   K+ DFG       Q   E   R        + APEV+ R  Y   VD
Sbjct: 143 KSDNILLGMDGSVKLTDFGFC----AQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVD 198

Query: 86  MWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDR 145
           +WS    A E+  G+    P          ++    + LI                    
Sbjct: 199 IWSLGIMAIEMIEGE---PPYL-------NENPLRALYLIATNGT--------------- 233

Query: 146 HGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 205
                 ++  +  S                  F +FL   L+   EKR +A++ LQH +L
Sbjct: 234 ----PELQNPEKLS----------------AIFRDFLNRCLEMDVEKRGSAKELLQHQFL 273

Query: 206 S 206
            
Sbjct: 274 K 274

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score = 57.0 bits (138), Expect = 7e-10
 Identities = 34/204 (16%), Positives = 64/204 (31%), Gaps = 49/204 (24%)

Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTR----QYRAPEVILRAG--YSFSVDM 86
           KP   L   + R K+ DFG    +     ++I+      ++  PE            VD+
Sbjct: 179 KPSNILMDKNGRVKLSDFG---ESEYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDI 235

Query: 87  WSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRH 146
           WS     + +        P     F      + L           I            R 
Sbjct: 236 WSLGICLYVMFYN---VVP-----FSLKISLVELF--------NNI------------RT 267

Query: 147 GDLK---RIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHP 203
            +++         +   ++       F   +  +F   L   L   P +R T++  L+H 
Sbjct: 268 KNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDF---LKLFLRKNPAERITSEDALKHE 324

Query: 204 WLS------LRNSTRDETKNKSNV 221
           WL+      LR  +++  K +  +
Sbjct: 325 WLADTNIEDLREFSKELYKKRKKL 348

>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310

 Score = 56.1 bits (136), Expect = 1e-09
 Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 13/76 (17%)

Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQ---------TRQYRAPEVILRAGYSFS 83
           KPE  L   DM  ++ DFG A    K  + E +         T QY +PE++       S
Sbjct: 157 KPENILLNEDMHIQITDFGTA----KVLSPESKQARANSFVGTAQYVSPELLTEKSACKS 212

Query: 84  VDMWSFACTAFELATG 99
            D+W+  C  ++L  G
Sbjct: 213 SDLWALGCIIYQLVAG 228

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318

 Score = 55.8 bits (135), Expect = 2e-09
 Identities = 31/168 (18%), Positives = 50/168 (29%), Gaps = 51/168 (30%)

Query: 45  CKVVDFGNACRANKQFAE--EIQTRQYRAPEVI-----LRAGYSFSVDMWSFACTAFELA 97
            K+ DFG + R     A+        Y APE I      +  Y    D+WS   +  ELA
Sbjct: 164 IKLCDFGISGRLVDDKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELA 223

Query: 98  TGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKF 157
           TG   +                   E++ K+                   +   +     
Sbjct: 224 TGQFPYKNCKT------------DFEVLTKVL----------------QEEPPLLPGHMG 255

Query: 158 WSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 205
           +S                 +F  F+   L     KRP   + L+H ++
Sbjct: 256 FS----------------GDFQSFVKDCLTKDHRKRPKYNKLLEHSFI 287

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score = 55.8 bits (135), Expect = 2e-09
 Identities = 40/169 (23%), Positives = 60/169 (35%), Gaps = 56/169 (33%)

Query: 44  RCKVVDFGNACRANKQFAEEIQTRQ-------YRAPEVILRAGYSFSVDMWSFACTAFEL 96
             K+ DFG A     Q  + +  R        + APEVI   GY+   D+WS   TA E+
Sbjct: 163 HAKLADFGVA----GQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEM 218

Query: 97  ATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLK 156
           A G     P +       + H    + +I   P                          +
Sbjct: 219 AEGK---PPYA-------DIHPMRAIFMIPTNPPP----------------------TFR 246

Query: 157 FWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 205
                        +S+     F +F+   L  +PE+R TA Q LQHP++
Sbjct: 247 ---------KPELWSD----NFTDFVKQCLVKSPEQRATATQLLQHPFV 282

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325

 Score = 55.4 bits (134), Expect = 3e-09
 Identities = 37/193 (19%), Positives = 63/193 (32%), Gaps = 55/193 (28%)

Query: 33  KPERCL---DGIDMRCKVVDFGNACR---ANKQFAEEIQTRQYRAPEVILRAGYSFSVDM 86
           KPE  L   +  ++  K++DFG A      N+       T  Y APE++ + GY  S D+
Sbjct: 133 KPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELLNQNGYDESCDL 192

Query: 87  WSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRH 146
           WS     + + +G + F        C     +                            
Sbjct: 193 WSLGVILYTMLSGQVPFQSHDRSLTCTSAVEI---------------------------- 224

Query: 147 GDLKRIRRLKF------WSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCL 200
             +K+I++  F      W            S+ +A++  + L   L   P KR       
Sbjct: 225 --MKKIKKGDFSFEGEAWK---------NVSQ-EAKDLIQGL---LTVDPNKRLKMSGLR 269

Query: 201 QHPWLSLRNSTRD 213
            + WL   +    
Sbjct: 270 YNEWLQDGSQLSS 282

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score = 54.7 bits (131), Expect = 5e-09
 Identities = 17/182 (9%), Positives = 35/182 (19%), Gaps = 61/182 (33%)

Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEE----IQTRQYRAPEVILRAG-----YSFS 83
           +P   +        +  F +  R                +  A  ++          +F+
Sbjct: 238 RPVDIVLDQRGGVFLTGFEHLVRDGASAVSPIGRGFAPPETTAERMLPFGQHHPTLMTFA 297

Query: 84  VDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYF 143
            D W+     + +   D+             +D      E I                  
Sbjct: 298 FDTWTLGLAIYWIWCADLPN----------TDDAALGGSEWI------------------ 329

Query: 144 DRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHP 203
                                       +         L   L +  E R    Q ++ P
Sbjct: 330 --------------------FRSCKNIPQ----PVRALLEGFLRYPKEDRLLPLQAMETP 365

Query: 204 WL 205
             
Sbjct: 366 EY 367

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322

 Score = 53.1 bits (128), Expect = 1e-08
 Identities = 44/199 (22%), Positives = 65/199 (32%), Gaps = 57/199 (28%)

Query: 33  KPERCL---DGIDMRCKVVDFG--NACRANKQFAEEIQTRQYRAPEVI---LRAGYSFSV 84
           KPE  L      D   K+ DFG                T  Y APEV+     AGY+ +V
Sbjct: 141 KPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAV 200

Query: 85  DMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQ-SKDYF 143
           D WS     F   +G   + P     F E    ++L          +I  G      + +
Sbjct: 201 DCWSLGVILFICLSG---YPP-----FSEHRTQVSLK--------DQITSGKYNFIPEVW 244

Query: 144 DRHGDLKR--IRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ 201
               +     +++L       L+VD                       P+ R T ++ L+
Sbjct: 245 AEVSEKALDLVKKL-------LVVD-----------------------PKARFTTEEALR 274

Query: 202 HPWLSLRNSTRDETKNKSN 220
           HPWL   +  R      S 
Sbjct: 275 HPWLQDEDMKRKFQDLLSE 293

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score = 53.1 bits (128), Expect = 1e-08
 Identities = 35/166 (21%), Positives = 59/166 (35%), Gaps = 48/166 (28%)

Query: 46  KVVDFGNACRANKQFAE--EIQTRQYRAPEVI----LRAGYSFSVDMWSFACTAFELATG 99
           K+ DFG + +     A+  +   R Y APE I     R GY    D+WS   T +ELATG
Sbjct: 166 KLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATG 225

Query: 100 DMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWS 159
              +   +             + + + ++ +                       +L    
Sbjct: 226 RFPYPKWNS------------VFDQLTQVVKGDPP-------------------QLSN-- 252

Query: 160 LDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 205
                 ++  FS      F  F+   L     KRP  ++ L+HP++
Sbjct: 253 -----SEEREFSP----SFINFVNLCLTKDESKRPKYKELLKHPFI 289

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score = 53.1 bits (128), Expect = 1e-08
 Identities = 20/75 (26%), Positives = 29/75 (38%), Gaps = 3/75 (4%)

Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAE---EIQTRQYRAPEVILRAGYSFSVDMWSF 89
           K    L       KV DFG +      F        T ++ APEV+     +   D++SF
Sbjct: 166 KSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSF 225

Query: 90  ACTAFELATGDMLFA 104
               +ELAT    + 
Sbjct: 226 GVILWELATLQQPWG 240

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score = 52.4 bits (126), Expect = 3e-08
 Identities = 27/189 (14%), Positives = 50/189 (26%), Gaps = 64/189 (33%)

Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFA---------EEIQ---TRQYRAPEVI---LR 77
           KP   L G + +  ++D G+  +A              +      T  YRAPE+      
Sbjct: 161 KPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSH 220

Query: 78  AGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGA 137
                  D+WS  C  + +                             G+ P        
Sbjct: 221 CVIDERTDVWSLGCVLYAMMF---------------------------GEGP-------- 245

Query: 138 QSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDA--REFAEFLVPLLDFTPEKRPT 195
                +D           K  S+   + ++    ++        + L  ++   P +RP 
Sbjct: 246 -----YDMVF-------QKGDSVALAVQNQLSIPQSPRHSSALWQLLNSMMTVDPHQRPH 293

Query: 196 AQQCLQHPW 204
               L    
Sbjct: 294 IPLLLSQLE 302

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 51.5 bits (124), Expect = 4e-08
 Identities = 23/80 (28%), Positives = 35/80 (43%), Gaps = 8/80 (10%)

Query: 33  KPERCLDGIDMRCKVVDFGNA-----CRANKQFAEEIQTRQYRAPEVILRAG---YSFSV 84
           K        D   K+ DFG A        + QF +   +  + APEVI       YSF  
Sbjct: 147 KSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQS 206

Query: 85  DMWSFACTAFELATGDMLFA 104
           D+++F    +EL TG + ++
Sbjct: 207 DVYAFGIVLYELMTGQLPYS 226

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543

 Score = 51.3 bits (123), Expect = 8e-08
 Identities = 19/71 (26%), Positives = 30/71 (42%), Gaps = 5/71 (7%)

Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTR----QYRAPEVILRAGYSFSVDMWS 88
           KPE  L   D   ++ D G      K    + +       + APE++L   Y FSVD ++
Sbjct: 316 KPENVLLDDDGNVRISDLG-LAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFA 374

Query: 89  FACTAFELATG 99
              T +E+   
Sbjct: 375 LGVTLYEMIAA 385

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score = 50.8 bits (122), Expect = 8e-08
 Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 2/65 (3%)

Query: 42  DMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAG--YSFSVDMWSFACTAFELATG 99
            +  KV DFG + ++    +  +   Q+ APE I      Y+   D +SFA   + + TG
Sbjct: 165 PVCAKVADFGLSQQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTG 224

Query: 100 DMLFA 104
           +  F 
Sbjct: 225 EGPFD 229

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350

 Score = 50.7 bits (122), Expect = 9e-08
 Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 20/77 (25%)

Query: 33  KPERCLDGIDMR--CKVVDFGNACRANKQFAEEIQTR--------QYRAPEVILRAGYSF 82
           KPE  L  ID +   +V DFG        FA+ ++ R        +  APE+IL  GY+ 
Sbjct: 168 KPENLL--IDQQGYIQVTDFG--------FAKRVKGRTWTLCGTPEALAPEIILSKGYNK 217

Query: 83  SVDMWSFACTAFELATG 99
           +VD W+     +E+A G
Sbjct: 218 AVDWWALGVLIYEMAAG 234

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score = 49.6 bits (119), Expect = 2e-07
 Identities = 22/67 (32%), Positives = 29/67 (43%), Gaps = 17/67 (25%)

Query: 44  RCKVVDFGNACRANKQFAEEIQTRQYR----------APEVILRAGYSFSVDMWSFACTA 93
             K+ DFG A        +   T+  R          APEVI ++ Y    D+WS   TA
Sbjct: 157 EVKLADFGVA-------GQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITA 209

Query: 94  FELATGD 100
            ELA G+
Sbjct: 210 IELARGE 216

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score = 49.2 bits (118), Expect = 3e-07
 Identities = 18/75 (24%), Positives = 29/75 (38%), Gaps = 5/75 (6%)

Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGY---SFSVDMWSF 89
                +   DM  ++         + Q    +    + APE + +        S DMWSF
Sbjct: 140 NSRSVMIDEDMTARISMADVKF--SFQSPGRMYAPAWVAPEALQKKPEDTNRRSADMWSF 197

Query: 90  ACTAFELATGDMLFA 104
           A   +EL T ++ FA
Sbjct: 198 AVLLWELVTREVPFA 212

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score = 49.3 bits (118), Expect = 3e-07
 Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 4/60 (6%)

Query: 33  KPER--CLDGIDMRCKVVDFGNACR--ANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWS 88
           KPE   C        K++DFG A +   ++       T ++ APE++ R    F  DMW+
Sbjct: 176 KPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWA 235

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score = 45.1 bits (107), Expect = 7e-06
 Identities = 14/40 (35%), Positives = 17/40 (42%)

Query: 185 LLDFTPEKRPTAQQCLQHPWLSLRNSTRDETKNKSNVEKV 224
           LL   P KR T    L+HPWL   +S        S   K+
Sbjct: 288 LLQKEPRKRLTVHDALEHPWLKGDHSNLTSRIPSSRYNKI 327

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score = 49.3 bits (118), Expect = 3e-07
 Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 4/60 (6%)

Query: 33  KPER--CLDGIDMRCKVVDFGNACR--ANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWS 88
           KPE   C++    + K++DFG A R    ++      T ++ APEV+     SF  DMWS
Sbjct: 214 KPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNFGTPEFLAPEVVNYDFVSFPTDMWS 273

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score = 44.3 bits (105), Expect = 1e-05
 Identities = 11/34 (32%), Positives = 15/34 (44%)

Query: 185 LLDFTPEKRPTAQQCLQHPWLSLRNSTRDETKNK 218
           LL      R +A + L+HPWLS        +  K
Sbjct: 326 LLIKEKSWRISASEALKHPWLSDHKLHSRLSAQK 359

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score = 49.2 bits (118), Expect = 3e-07
 Identities = 17/60 (28%), Positives = 24/60 (40%), Gaps = 4/60 (6%)

Query: 33  KPER--CLDGIDMRCKVVDFGNACR--ANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWS 88
           +PE            K+++FG A +      F       +Y APEV      S + DMWS
Sbjct: 129 RPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWS 188

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score = 42.6 bits (101), Expect = 4e-05
 Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 1/39 (2%)

Query: 185 LLDFTPEKRPTAQQCLQHPWLSLRNSTRDETKNKSNVEK 223
           LL    + R TA + LQHPWL  +   R  TK    ++ 
Sbjct: 241 LLVKERKSRMTASEALQHPWLK-QKIERVSTKVIRTLKH 278

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576

 Score = 49.4 bits (118), Expect = 3e-07
 Identities = 21/73 (28%), Positives = 29/73 (39%), Gaps = 10/73 (13%)

Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQ------YRAPEVILRAGYSFSVDM 86
           KPE  L       ++ D G A        E    +       Y APEV+    Y+FS D 
Sbjct: 313 KPENILLDDHGHIRISDLGLA----VHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDW 368

Query: 87  WSFACTAFELATG 99
           W+  C  +E+  G
Sbjct: 369 WALGCLLYEMIAG 381

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score = 49.4 bits (118), Expect = 4e-07
 Identities = 16/60 (26%), Positives = 22/60 (36%), Gaps = 4/60 (6%)

Query: 33  KPER--CLDGIDMRCKVVDFGNACR--ANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWS 88
           KPE            K++DFG        +       T ++ APEV       +  DMWS
Sbjct: 282 KPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWS 341

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score = 45.6 bits (108), Expect = 6e-06
 Identities = 13/39 (33%), Positives = 20/39 (51%)

Query: 185 LLDFTPEKRPTAQQCLQHPWLSLRNSTRDETKNKSNVEK 223
           LL   P  R T  Q L+HPWL+  N+   +++  S+   
Sbjct: 394 LLLADPNTRMTIHQALEHPWLTPGNAPGRDSQIPSSRYT 432

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345

 Score = 49.2 bits (118), Expect = 4e-07
 Identities = 22/97 (22%), Positives = 37/97 (38%), Gaps = 6/97 (6%)

Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQ----TRQYRAPEVILRAGYSFSVDMWS 88
           K +  L   +   K+ D+G  C+   +  +       T  Y APE++    Y FSVD W+
Sbjct: 137 KLDNVLLDSEGHIKLTDYG-MCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWA 195

Query: 89  FACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELI 125
                FE+  G   F         +       + ++I
Sbjct: 196 LGVLMFEMMAGRSPFDIVGSSDNPDQNTE-DYLFQVI 231

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} Length = 396

 Score = 48.9 bits (117), Expect = 4e-07
 Identities = 22/97 (22%), Positives = 37/97 (38%), Gaps = 6/97 (6%)

Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQ----TRQYRAPEVILRAGYSFSVDMWS 88
           K +  L   +   K+ D+G  C+   +  +       T  Y APE++    Y FSVD W+
Sbjct: 180 KLDNVLLDSEGHIKLTDYG-MCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWA 238

Query: 89  FACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELI 125
                FE+  G   F         +       + ++I
Sbjct: 239 LGVLMFEMMAGRSPFDIVGSSDNPDQNTE-DYLFQVI 274

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 49.1 bits (116), Expect = 5e-07
 Identities = 31/198 (15%), Positives = 61/198 (30%), Gaps = 45/198 (22%)

Query: 36  RCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYS-FSVDMWSFACTAF 94
           +  +  ++ CK++               + TR  +  + +  A  +  S+D  S   T  
Sbjct: 257 KAWNAFNLSCKIL---------------LTTRFKQVTDFLSAATTTHISLDHHSMTLTPD 301

Query: 95  ELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRR 154
           E+ +   L         C  +D   L  E++   PR+++I     +D           + 
Sbjct: 302 EVKS---LLLKYLD---CRPQD---LPREVLTTNPRRLSIIAESIRDGLAT---WDNWKH 349

Query: 155 LKFWSLDRLLVDKYR-FSETDARE-FAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNSTR 212
           +    L  ++          + R+ F    V    F P         L   W    +  +
Sbjct: 350 VNCDKLTTIIESSLNVLEPAEYRKMFDRLSV----F-PPSAHIPTILLSLIWF---DVIK 401

Query: 213 DET-------KNKSNVEK 223
            +           S VEK
Sbjct: 402 SDVMVVVNKLHKYSLVEK 419

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score = 48.3 bits (116), Expect = 5e-07
 Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 6/62 (9%)

Query: 33  KPERCL----DGIDMRCKVVDFGNACR--ANKQFAEEIQTRQYRAPEVILRAGYSFSVDM 86
           KPE  +    +  + R K++DFG A +  A  +F     T ++ APE++         DM
Sbjct: 135 KPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADM 194

Query: 87  WS 88
           WS
Sbjct: 195 WS 196

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score = 43.3 bits (103), Expect = 3e-05
 Identities = 9/34 (26%), Positives = 15/34 (44%)

Query: 185 LLDFTPEKRPTAQQCLQHPWLSLRNSTRDETKNK 218
           LL   P++R T  Q L+H W+          ++ 
Sbjct: 249 LLVKDPKRRMTIAQSLEHSWIKAIRRRNVRGEDS 282

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328

 Score = 48.4 bits (116), Expect = 5e-07
 Identities = 36/176 (20%), Positives = 54/176 (30%), Gaps = 51/176 (28%)

Query: 33  KPERCLDGIDMRCKVVDFG--NACRANKQFAEEIQTRQYRAPEVILRAGYS-FSVDMWSF 89
           K E  L   DM  K+ DFG  N      +         Y APE+     Y    VD+WS 
Sbjct: 141 KAENLLLDADMNIKIADFGFSNEFTVGGKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSL 200

Query: 90  ACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDL 149
               + L +G + F          D  +L        ++  ++  G              
Sbjct: 201 GVILYTLVSGSLPF----------DGQNLK-------ELRERVLRG-------------- 229

Query: 150 KRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 205
                            KYR     + +    L   L   P KR T +Q ++  W+
Sbjct: 230 -----------------KYRIPFYMSTDCENLLKRFLVLNPIKRGTLEQIMKDRWI 268

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400

 Score = 48.2 bits (115), Expect = 8e-07
 Identities = 17/45 (37%), Positives = 21/45 (46%), Gaps = 2/45 (4%)

Query: 46  KVVDFGNA--CRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWS 88
           K+ DFG A    ++        T  Y APEV+    Y  S DMWS
Sbjct: 204 KLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWS 248

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400

 Score = 39.3 bits (92), Expect = 6e-04
 Identities = 8/29 (27%), Positives = 12/29 (41%)

Query: 185 LLDFTPEKRPTAQQCLQHPWLSLRNSTRD 213
           LL   P +R T  + + HPW+        
Sbjct: 305 LLKTEPTQRMTITEFMNHPWIMQSTKVPQ 333

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 Length = 318

 Score = 47.9 bits (115), Expect = 8e-07
 Identities = 24/77 (31%), Positives = 33/77 (42%), Gaps = 20/77 (25%)

Query: 33  KPERCLDGIDMR--CKVVDFGNACRANKQFAEEIQTR--------QYRAPEVILRAGYSF 82
           KPE  L  +D     K+ DFG        FA+ +            Y APEV+    Y+ 
Sbjct: 133 KPENIL--LDKNGHIKITDFG--------FAKYVPDVTYTLCGTPDYIAPEVVSTKPYNK 182

Query: 83  SVDMWSFACTAFELATG 99
           S+D WSF    +E+  G
Sbjct: 183 SIDWWSFGILIYEMLAG 199

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score = 48.0 bits (115), Expect = 8e-07
 Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 6/62 (9%)

Query: 33  KPERCL----DGIDMRCKVVDFGNACR--ANKQFAEEIQTRQYRAPEVILRAGYSFSVDM 86
           KPE  +    +    R K++DFG A +     +F     T ++ APE++         DM
Sbjct: 141 KPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADM 200

Query: 87  WS 88
           WS
Sbjct: 201 WS 202

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score = 44.2 bits (105), Expect = 2e-05
 Identities = 13/35 (37%), Positives = 21/35 (60%)

Query: 185 LLDFTPEKRPTAQQCLQHPWLSLRNSTRDETKNKS 219
           LL   P+KR T Q  LQHPW+  +++ +  ++  S
Sbjct: 255 LLVKDPKKRMTIQDSLQHPWIKPKDTQQALSRKAS 289

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score = 48.0 bits (115), Expect = 8e-07
 Identities = 17/62 (27%), Positives = 26/62 (41%), Gaps = 6/62 (9%)

Query: 33  KPERCL----DGIDMRCKVVDFGNACR--ANKQFAEEIQTRQYRAPEVILRAGYSFSVDM 86
           KPE  +    +      K++DFG A       +F     T ++ APE++         DM
Sbjct: 142 KPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADM 201

Query: 87  WS 88
           WS
Sbjct: 202 WS 203

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score = 43.4 bits (103), Expect = 2e-05
 Identities = 12/37 (32%), Positives = 21/37 (56%)

Query: 185 LLDFTPEKRPTAQQCLQHPWLSLRNSTRDETKNKSNV 221
           LL     KR T Q+ L+HPW++  ++ +   + +S V
Sbjct: 256 LLVKETRKRLTIQEALRHPWITPVDNQQAMVRRESVV 292

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446

 Score = 48.2 bits (115), Expect = 9e-07
 Identities = 25/97 (25%), Positives = 41/97 (42%), Gaps = 15/97 (15%)

Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQ----TRQYRAPEVILRAGYSFSVDMWS 88
           K E  +   D   K+ DFG  C+   +    ++    T +Y APEV+    Y  +VD W 
Sbjct: 276 KLENLMLDKDGHIKITDFG-LCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWG 334

Query: 89  FACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELI 125
                +E+  G + F       + +D +    + ELI
Sbjct: 335 LGVVMYEMMCGRLPF-------YNQDHEK---LFELI 361

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290

 Score = 47.6 bits (114), Expect = 9e-07
 Identities = 38/166 (22%), Positives = 59/166 (35%), Gaps = 51/166 (30%)

Query: 46  KVVDFGNACRANKQFAEE--IQTRQYRAPEVIL----RAGYSFSVDMWSFACTAFELATG 99
           K+ DFG +       A++     + Y APE I     + GYS   D+WS   T  ELA  
Sbjct: 150 KMCDFGISGYLVDDVAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELA-- 207

Query: 100 DMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWS 159
                                    I + P            Y       ++++++    
Sbjct: 208 -------------------------ILRFP------------YDSWGTPFQQLKQVVEEP 230

Query: 160 LDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 205
             +L  DK  FS     EF +F    L    ++RPT  + +QHP+ 
Sbjct: 231 SPQLPADK--FSA----EFVDFTSQCLKKNSKERPTYPELMQHPFF 270

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298

 Score = 47.6 bits (114), Expect = 1e-06
 Identities = 38/182 (20%), Positives = 58/182 (31%), Gaps = 58/182 (31%)

Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQ------YRAPEVI--LRAGYS-FS 83
           KP   L G D   K+ DFG    +N+    +           + APE +   R  +S  +
Sbjct: 164 KPSNLLVGEDGHIKIADFG---VSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKA 220

Query: 84  VDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYF 143
           +D+W+   T +    G   F          DE  + L          KI     +  D  
Sbjct: 221 LDVWAMGVTLYCFVFGQCPF---------MDERIMCLH--------SKIKSQALEFPDQP 263

Query: 144 DRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHP 203
           D   DLK +       + R+L         +               PE R    +   HP
Sbjct: 264 DIAEDLKDL-------ITRMLD-------KN---------------PESRIVVPEIKLHP 294

Query: 204 WL 205
           W+
Sbjct: 295 WV 296

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score = 47.7 bits (114), Expect = 1e-06
 Identities = 17/62 (27%), Positives = 26/62 (41%), Gaps = 6/62 (9%)

Query: 33  KPERCL----DGIDMRCKVVDFGNACR--ANKQFAEEIQTRQYRAPEVILRAGYSFSVDM 86
           KPE  +    +      K++DFG A       +F     T ++ APE++         DM
Sbjct: 142 KPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADM 201

Query: 87  WS 88
           WS
Sbjct: 202 WS 203

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score = 43.5 bits (103), Expect = 2e-05
 Identities = 12/37 (32%), Positives = 21/37 (56%)

Query: 185 LLDFTPEKRPTAQQCLQHPWLSLRNSTRDETKNKSNV 221
           LL     KR T Q+ L+HPW++  ++ +   + +S V
Sbjct: 256 LLVKETRKRLTIQEALRHPWITPVDTQQAMVRRESVV 292

>3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695

 Score = 47.6 bits (113), Expect = 1e-06
 Identities = 21/72 (29%), Positives = 30/72 (41%), Gaps = 8/72 (11%)

Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTR----QYRAPEVILR-AGYSFSVDMW 87
           KP   L       ++ D G AC  +K   ++         Y APEV+ +   Y  S D +
Sbjct: 319 KPANILLDEHGHVRISDLGLACDFSK---KKPHASVGTHGYMAPEVLQKGVAYDSSADWF 375

Query: 88  SFACTAFELATG 99
           S  C  F+L  G
Sbjct: 376 SLGCMLFKLLRG 387

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335

 Score = 47.4 bits (113), Expect = 1e-06
 Identities = 34/176 (19%), Positives = 55/176 (31%), Gaps = 57/176 (32%)

Query: 33  KPERCLDGIDMRCKVVDFG--NACRANKQFAEEIQTRQYRAPEVILRAGYS-FSVDMWSF 89
           K E  +   D   K++DFG        K F     T +Y APEV++   Y    ++MWS 
Sbjct: 157 KDENIVIAEDFTIKLIDFGSAAYLERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWS- 215

Query: 90  ACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDL 149
                    G  L+              L     +  + P             F    +L
Sbjct: 216 -L-------GVTLYT-------------L-----VFEENP-------------FC---EL 233

Query: 150 KRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 205
           +                        ++E    +  LL   PE+R T ++ +  PW+
Sbjct: 234 EETVE-----------AAIHPPYLVSKELMSLVSGLLQPVPERRTTLEKLVTDPWV 278

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score = 46.9 bits (112), Expect = 2e-06
 Identities = 20/61 (32%), Positives = 24/61 (39%), Gaps = 5/61 (8%)

Query: 33  KPERCL---DGIDMRCKVVDFGNA--CRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMW 87
           KPE  L      D   K+ DFG +              T  Y APE++    Y   VDMW
Sbjct: 175 KPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTPGYCAPEILRGCAYGPEVDMW 234

Query: 88  S 88
           S
Sbjct: 235 S 235

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score = 43.5 bits (103), Expect = 3e-05
 Identities = 13/47 (27%), Positives = 20/47 (42%)

Query: 185 LLDFTPEKRPTAQQCLQHPWLSLRNSTRDETKNKSNVEKVDVGMSKL 231
           L+   P+KR T  Q LQHPW++ + +            +      KL
Sbjct: 289 LIVLDPKKRLTTFQALQHPWVTGKAANFVHMDTAQKKLQEFNARRKL 335

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score = 46.7 bits (111), Expect = 2e-06
 Identities = 35/192 (18%), Positives = 50/192 (26%), Gaps = 72/192 (37%)

Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQF-----------AEEIQTR----QYRAPEVI-- 75
           K E  L       K+ DFG+A   +               EE  TR     YR PE+I  
Sbjct: 165 KVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDL 224

Query: 76  -LRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAI 134
                     D+W+  C  + L      F           ED   L          +I  
Sbjct: 225 YSNFPIGEKQDIWALGCILYLLCFRQHPF-----------EDGAKL----------RIVN 263

Query: 135 GGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAR--EFAEFLVPLLDFTPEK 192
           G                               KY     D +   F   +  +L   PE+
Sbjct: 264 G-------------------------------KYSIPPHDTQYTVFHSLIRAMLQVNPEE 292

Query: 193 RPTAQQCLQHPW 204
           R +  + +    
Sbjct: 293 RLSIAEVVHQLQ 304

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score = 46.5 bits (111), Expect = 2e-06
 Identities = 20/73 (27%), Positives = 31/73 (42%), Gaps = 1/73 (1%)

Query: 33  KPERCLDGIDMRCKVVDFGNAC-RANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFAC 91
           +     D  +   K+ DFG A                + APEVI  + +S   D+WS+  
Sbjct: 143 QKVENGDLSNKILKITDFGLAREWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGV 202

Query: 92  TAFELATGDMLFA 104
             +EL TG++ F 
Sbjct: 203 LLWELLTGEVPFR 215

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320

 Score = 46.6 bits (111), Expect = 2e-06
 Identities = 37/176 (21%), Positives = 59/176 (33%), Gaps = 57/176 (32%)

Query: 33  KPERCL-DGIDMRCKVVDFG-NACRANKQFAEEIQTRQYRAPEVILRAGYS-FSVDMWSF 89
           K E  L D      K++DFG  A   +  + +   TR Y  PE I    Y   S  +WS 
Sbjct: 176 KDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 235

Query: 90  ACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDL 149
                    G +L+                 M  + G +P             F+     
Sbjct: 236 ---------GILLYD----------------M--VCGDIP-------------FE---HD 252

Query: 150 KRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 205
           + I R + +        + R S ++ +     +   L   P  RPT ++   HPW+
Sbjct: 253 EEIIRGQVFF-------RQRVS-SECQ---HLIRWCLALRPSDRPTFEEIQNHPWM 297

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327

 Score = 46.5 bits (111), Expect = 3e-06
 Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 5/61 (8%)

Query: 33  KPERCL---DGIDMRCKVVDFGNACR--ANKQFAEEIQTRQYRAPEVILRAGYSFSVDMW 87
           KP+  L          K+VDFG + +     +  E + T +Y APE++     + + DMW
Sbjct: 158 KPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREIMGTPEYLAPEILNYDPITTATDMW 217

Query: 88  S 88
           +
Sbjct: 218 N 218

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327

 Score = 44.2 bits (105), Expect = 1e-05
 Identities = 14/37 (37%), Positives = 19/37 (51%)

Query: 185 LLDFTPEKRPTAQQCLQHPWLSLRNSTRDETKNKSNV 221
           LL   PEKRPTA+ CL H WL   +        +++ 
Sbjct: 271 LLVKNPEKRPTAEICLSHSWLQQWDFENLFHPEETSS 307

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384

 Score = 46.2 bits (110), Expect = 3e-06
 Identities = 28/78 (35%), Positives = 35/78 (44%), Gaps = 17/78 (21%)

Query: 33  KPERCLDGIDMR--CKVVDFGNACRANKQFAEEIQ------TRQYRAPEVILR---AGYS 81
           KP+  L  +D      + DF  A         E Q      T+ Y APE+      AGYS
Sbjct: 142 KPDNIL--LDEHGHVHITDFNIA----AMLPRETQITTMAGTKPYMAPEMFSSRKGAGYS 195

Query: 82  FSVDMWSFACTAFELATG 99
           F+VD WS   TA+EL  G
Sbjct: 196 FAVDWWSLGVTAYELLRG 213

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361

 Score = 46.2 bits (110), Expect = 4e-06
 Identities = 42/211 (19%), Positives = 66/211 (31%), Gaps = 49/211 (23%)

Query: 33  KPERCL-DG-IDMRCKVVDFG--NACRANKQFAEEIQTRQYRAPEVILRAGYS-FSVDMW 87
           K E  L DG    R K+ DFG   +   + Q    + T  Y APEV+LR  Y     D+W
Sbjct: 143 KLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLRQEYDGKIADVW 202

Query: 88  SFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHG 147
           S   T + +  G   F         ED +          K  ++I         Y     
Sbjct: 203 SCGVTLYVMLVGAYPF---------EDPE----EPRDYRKTIQRILSV-----KY----- 239

Query: 148 DLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL-- 205
               I      S              +       +  +    P  R +  +   H W   
Sbjct: 240 ---SIPDDIRIS-------------PECC---HLISRIFVADPATRISIPEIKTHSWFLK 280

Query: 206 SLRNSTRDETKNKSNVEKVDVGMSKLEIKVG 236
           +L     +E+   S  ++ +  M  L+  + 
Sbjct: 281 NLPADLMNESNTGSQFQEPEQPMQSLDTIMQ 311

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score = 45.6 bits (109), Expect = 4e-06
 Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 5/61 (8%)

Query: 33  KPERCL---DGIDMRCKVVDFGNA--CRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMW 87
           KPE  L          K+ DFG A     ++ +     T  Y +PEV+ +  YS  VD+W
Sbjct: 132 KPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIW 191

Query: 88  S 88
           +
Sbjct: 192 A 192

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score = 41.0 bits (97), Expect = 1e-04
 Identities = 12/38 (31%), Positives = 18/38 (47%)

Query: 185 LLDFTPEKRPTAQQCLQHPWLSLRNSTRDETKNKSNVE 222
           +L   P+KR TA Q L+ PW+  R         +  V+
Sbjct: 245 MLTVNPKKRITADQALKVPWICNRERVASAIHRQDTVD 282

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score = 46.1 bits (110), Expect = 4e-06
 Identities = 17/62 (27%), Positives = 23/62 (37%), Gaps = 6/62 (9%)

Query: 33  KPERCL---DGIDMRCKVVDFGNAC---RANKQFAEEIQTRQYRAPEVILRAGYSFSVDM 86
           KP   L          K+  FG A     +       + T  + APEV+ R  Y   VD+
Sbjct: 157 KPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDV 216

Query: 87  WS 88
           W 
Sbjct: 217 WG 218

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score = 42.3 bits (100), Expect = 7e-05
 Identities = 12/39 (30%), Positives = 18/39 (46%)

Query: 185 LLDFTPEKRPTAQQCLQHPWLSLRNSTRDETKNKSNVEK 223
           +L   P +R T  + L HPWL  R+    +      VE+
Sbjct: 270 MLMLDPAERITVYEALNHPWLKERDRYAYKIHLPETVEQ 308

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score = 45.8 bits (109), Expect = 4e-06
 Identities = 18/80 (22%), Positives = 32/80 (40%), Gaps = 13/80 (16%)

Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQ-------TRQYRAPEVI------LRAG 79
           K +  L   + +C + D G A   ++   +          T++Y APEV+          
Sbjct: 140 KSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFD 199

Query: 80  YSFSVDMWSFACTAFELATG 99
               VD+W+F    +E+A  
Sbjct: 200 SYKRVDIWAFGLVLWEVARR 219

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score = 45.8 bits (109), Expect = 5e-06
 Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 5/61 (8%)

Query: 33  KPERCL---DGIDMRCKVVDFGNA--CRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMW 87
           KPE  L          K+ DFG A     ++ +     T  Y +PEV+ +  YS  VD+W
Sbjct: 155 KPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIW 214

Query: 88  S 88
           +
Sbjct: 215 A 215

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score = 42.3 bits (100), Expect = 6e-05
 Identities = 12/39 (30%), Positives = 18/39 (46%)

Query: 185 LLDFTPEKRPTAQQCLQHPWLSLRNSTRDETKNKSNVEK 223
           +L   P+KR TA Q L+ PW+  R         +  V+ 
Sbjct: 268 MLTVNPKKRITADQALKVPWICNRERVASAIHRQDTVDC 306

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336

 Score = 45.0 bits (107), Expect = 7e-06
 Identities = 22/60 (36%), Positives = 24/60 (40%), Gaps = 4/60 (6%)

Query: 33  KPERCL---DGIDMRCKVVDFGNA-CRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWS 88
           KPE  L      D   K+ DFG A             T  Y APEV+    Y  S DMWS
Sbjct: 155 KPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCYTPYYVAPEVLGPEKYDKSCDMWS 214

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336

 Score = 40.0 bits (94), Expect = 3e-04
 Identities = 10/39 (25%), Positives = 17/39 (43%)

Query: 185 LLDFTPEKRPTAQQCLQHPWLSLRNSTRDETKNKSNVEK 223
           LL   P +R T  Q + HPW++          + + V +
Sbjct: 271 LLKTDPTERLTITQFMNHPWINQSMVVPQTPLHTARVLQ 309

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* Length = 327

 Score = 44.8 bits (107), Expect = 8e-06
 Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 5/71 (7%)

Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQ----TRQYRAPEVILRAGYSFSVDMWS 88
           KPE  +       K+ DFG  C+ +            T +Y APE+++R+G++ +VD WS
Sbjct: 148 KPENIMLNHQGHVKLTDFG-LCKESIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWS 206

Query: 89  FACTAFELATG 99
                +++ TG
Sbjct: 207 LGALMYDMLTG 217

>3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325

 Score = 44.5 bits (106), Expect = 1e-05
 Identities = 25/71 (35%), Positives = 36/71 (50%), Gaps = 5/71 (7%)

Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQ----TRQYRAPEVILRAGYSFSVDMWS 88
           KPE  L   +   K+ DFG   + +    ++      T +Y APEV+ R G++ S D WS
Sbjct: 153 KPENILLDEEGHIKLTDFG-LSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWS 211

Query: 89  FACTAFELATG 99
           F    FE+ TG
Sbjct: 212 FGVLMFEMLTG 222

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312

 Score = 44.6 bits (106), Expect = 1e-05
 Identities = 35/176 (19%), Positives = 54/176 (30%), Gaps = 57/176 (32%)

Query: 33  KPERCL-DGIDMRCKVVDFG-NACRANKQFAEEIQTRQYRAPEVILRAGYS-FSVDMWSF 89
           K E  L D      K++DFG  A   ++ + +   TR Y  PE I R  Y      +WS 
Sbjct: 166 KDENILIDLRRGCAKLIDFGSGALLHDEPYTDFDGTRVYSPPEWISRHQYHALPATVWSL 225

Query: 90  ACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDL 149
                    G +L+                 M  + G +P             F+     
Sbjct: 226 ---------GILLYD----------------M--VCGDIP-------------FE---RD 242

Query: 150 KRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 205
           + I   +              S  D       +   L   P  RP+ ++ L  PW+
Sbjct: 243 QEILEAELHF-------PAHVS-PDCC---ALIRRCLAPKPSSRPSLEEILLDPWM 287

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score = 44.5 bits (106), Expect = 1e-05
 Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 4/60 (6%)

Query: 33  KPERCL---DGIDMRCKVVDFGNA-CRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWS 88
           KPE  L      + +  + DFG +    N   +    T  Y APEV+ +  YS +VD WS
Sbjct: 133 KPENLLYLTPEENSKIMITDFGLSKMEQNGIMSTACGTPGYVAPEVLAQKPYSKAVDCWS 192

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score = 44.3 bits (105), Expect = 1e-05
 Identities = 13/80 (16%), Positives = 27/80 (33%), Gaps = 17/80 (21%)

Query: 42  DMRCKVVDFGNAC--------RANKQFAEEIQTRQYRAPEVI---------LRAGYSFSV 84
           + +  + DFG           R   +   +     + APE+I          +  +S   
Sbjct: 165 NGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHS 224

Query: 85  DMWSFACTAFELATGDMLFA 104
           D+++     +EL   +  F 
Sbjct: 225 DVFALGTIWYELHAREWPFK 244

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276

 Score = 44.1 bits (105), Expect = 1e-05
 Identities = 38/178 (21%), Positives = 59/178 (33%), Gaps = 55/178 (30%)

Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTR----QYRAPEVILRAGYS-FSVDMW 87
           KPE  L    M  K+ DFG +        E ++T      Y APEVI    Y+   VD+W
Sbjct: 138 KPENVLLDAHMNAKIADFGLS--NMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIW 195

Query: 88  SFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHG 147
           S     + L  G + F          D++H+  +        +KI  G      +     
Sbjct: 196 SCGVILYALLCGTLPF----------DDEHVPTLF-------KKIRGG-----VF----- 228

Query: 148 DLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 205
                  +  +            +          L+ +L   P KR T +   +H W 
Sbjct: 229 ------YIPEY-----------LN-RSVA---TLLMHMLQVDPLKRATIKDIREHEWF 265

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score = 44.1 bits (105), Expect = 1e-05
 Identities = 20/61 (32%), Positives = 27/61 (44%), Gaps = 6/61 (9%)

Query: 33  KPERCL---DGIDMRCKVVDFG--NACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMW 87
           KPE  L   D  D   K++DFG     +  K    ++ T  Y +P+V L   Y    D W
Sbjct: 133 KPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQV-LEGLYGPECDEW 191

Query: 88  S 88
           S
Sbjct: 192 S 192

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score = 41.8 bits (99), Expect = 8e-05
 Identities = 10/29 (34%), Positives = 17/29 (58%)

Query: 185 LLDFTPEKRPTAQQCLQHPWLSLRNSTRD 213
           LL  +P++R T+ Q L+H W   + S+  
Sbjct: 245 LLTKSPKQRITSLQALEHEWFEKQLSSSP 273

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316

 Score = 44.2 bits (105), Expect = 1e-05
 Identities = 40/202 (19%), Positives = 58/202 (28%), Gaps = 67/202 (33%)

Query: 33  KPERCL---DGIDMRCKVVDFGNA--CRANKQFAEEIQ--------TRQYRAPEVILRA- 78
           KPE  L          K+ DF      + N   +            + +Y APEV+    
Sbjct: 138 KPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFS 197

Query: 79  ----GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAI 134
                Y    D+WS     + L +G   F  + G     D        +    +   I  
Sbjct: 198 EEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQ--NMLFESIQE 255

Query: 135 GGAQSKDY-FDRHG---------DLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVP 184
           G      Y F             DL  I +L       L+ D                  
Sbjct: 256 G-----KYEFPDKDWAHISCAAKDL--ISKL-------LVRD------------------ 283

Query: 185 LLDFTPEKRPTAQQCLQHPWLS 206
                 ++R +A Q LQHPW+ 
Sbjct: 284 -----AKQRLSAAQVLQHPWVQ 300

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score = 44.1 bits (105), Expect = 2e-05
 Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 6/61 (9%)

Query: 33  KPERCL---DGIDMRCKVVDFG--NACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMW 87
           KPE  L          K++DFG     ++++       T  Y APEV  +   +F  D+W
Sbjct: 151 KPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAAGTALYMAPEV-FKRDVTFKCDIW 209

Query: 88  S 88
           S
Sbjct: 210 S 210

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score = 41.1 bits (97), Expect = 1e-04
 Identities = 10/21 (47%), Positives = 13/21 (61%)

Query: 185 LLDFTPEKRPTAQQCLQHPWL 205
           +L   PE+RP+A Q L H W 
Sbjct: 262 MLTKDPERRPSAAQVLHHEWF 282

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674

 Score = 44.6 bits (105), Expect = 2e-05
 Identities = 27/97 (27%), Positives = 39/97 (40%), Gaps = 15/97 (15%)

Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQ----TRQYRAPEVILRAGYSFSVDMWS 88
           K +  +   +   K+ DFG  C+ N       +    T  Y APE+I    Y  SVD W+
Sbjct: 469 KLDNVMLDSEGHIKIADFG-MCKENIWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWA 527

Query: 89  FACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELI 125
           F    +E+  G   F         EDED    + + I
Sbjct: 528 FGVLLYEMLAGQAPF-------EGEDEDE---LFQSI 554

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342

 Score = 43.8 bits (104), Expect = 2e-05
 Identities = 22/67 (32%), Positives = 28/67 (41%), Gaps = 15/67 (22%)

Query: 33  KPERCL----DGIDMRCKVVDFGNACRANKQFAEEIQ-------TRQYRAPEVILRAGYS 81
           KP   L     G     ++ DFG A    KQ   E         T  + APEV+ R GY 
Sbjct: 143 KPSNILYVDESGNPESIRICDFGFA----KQLRAENGLLMTPCYTANFVAPEVLERQGYD 198

Query: 82  FSVDMWS 88
            + D+WS
Sbjct: 199 AACDIWS 205

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342

 Score = 43.0 bits (102), Expect = 3e-05
 Identities = 10/36 (27%), Positives = 17/36 (47%)

Query: 185 LLDFTPEKRPTAQQCLQHPWLSLRNSTRDETKNKSN 220
           +L   P +R TA   L+HPW+   +       N+ +
Sbjct: 261 MLHVDPHQRLTAALVLRHPWIVHWDQLPQYQLNRQD 296

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score = 43.6 bits (103), Expect = 2e-05
 Identities = 16/80 (20%), Positives = 29/80 (36%), Gaps = 13/80 (16%)

Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQ-------TRQYRAPEVILRAG------ 79
           K +  L   +  C + D G A R +               T++Y APEV+  +       
Sbjct: 174 KSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFE 233

Query: 80  YSFSVDMWSFACTAFELATG 99
                D+++     +E+A  
Sbjct: 234 SFKRADIYAMGLVFWEIARR 253

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276

 Score = 43.3 bits (103), Expect = 3e-05
 Identities = 26/179 (14%), Positives = 42/179 (23%), Gaps = 53/179 (29%)

Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEI-QTR----QYRAPEVILRAGYS-FSVDM 86
           KPE  L       K+ DFG A        E +         Y APE++ R  +    VD+
Sbjct: 132 KPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDV 191

Query: 87  WSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRH 146
           WS       +  G++ +           +       E                  +    
Sbjct: 192 WSCGIVLTAMLAGELPW-----------DQPSDSCQEY-----SDWKEKKTYLNPWKKID 235

Query: 147 GDLKR-IRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPW 204
                 + +                              +L   P  R T     +  W
Sbjct: 236 SAPLALLHK------------------------------ILVENPSARITIPDIKKDRW 264

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score = 43.4 bits (103), Expect = 3e-05
 Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 2/49 (4%)

Query: 185 LLDFTPEKRPTAQQCLQHPWLSLRNSTRDETKNKSNVE--KVDVGMSKL 231
           +L   P KR TA + L+HPW+S R++       +  V+  K      KL
Sbjct: 251 MLTINPSKRITAAEALKHPWISHRSTVASCMHRQETVDCLKKFNARRKL 299

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score = 41.9 bits (99), Expect = 1e-04
 Identities = 18/62 (29%), Positives = 26/62 (41%), Gaps = 6/62 (9%)

Query: 33  KPERCL---DGIDMRCKVVDFGNACR---ANKQFAEEIQTRQYRAPEVILRAGYSFSVDM 86
           KPE  L          K+ DFG A       + +     T  Y +PEV+ +  Y   VD+
Sbjct: 137 KPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDL 196

Query: 87  WS 88
           W+
Sbjct: 197 WA 198

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score = 43.0 bits (102), Expect = 3e-05
 Identities = 23/61 (37%), Positives = 30/61 (49%), Gaps = 6/61 (9%)

Query: 33  KPERCL---DGIDMRCKVVDFGNA--CRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMW 87
           KPE  L      D   K++DFG +   + N +  + I T  Y APEV LR  Y    D+W
Sbjct: 148 KPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEV-LRGTYDEKCDVW 206

Query: 88  S 88
           S
Sbjct: 207 S 207

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score = 41.8 bits (99), Expect = 7e-05
 Identities = 13/26 (50%), Positives = 17/26 (65%)

Query: 185 LLDFTPEKRPTAQQCLQHPWLSLRNS 210
           +L F P  R TA QCL+HPW+   +S
Sbjct: 260 MLTFHPSLRITATQCLEHPWIQKYSS 285

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337

 Score = 43.4 bits (103), Expect = 3e-05
 Identities = 25/97 (25%), Positives = 40/97 (41%), Gaps = 15/97 (15%)

Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQ----TRQYRAPEVILRAGYSFSVDMWS 88
           K E  +   D   K+ DFG  C+        ++    T +Y APEV+    Y  +VD W 
Sbjct: 132 KLENLMLDKDGHIKITDFG-LCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWG 190

Query: 89  FACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELI 125
                +E+  G + F       + +D +    + ELI
Sbjct: 191 LGVVMYEMMCGRLPF-------YNQDHER---LFELI 217

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* Length = 345

 Score = 43.0 bits (102), Expect = 4e-05
 Identities = 28/97 (28%), Positives = 40/97 (41%), Gaps = 15/97 (15%)

Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQ----TRQYRAPEVILRAGYSFSVDMWS 88
           K +  L   D   K+ DFG  C+ N     +      T  Y APE++L   Y+ SVD WS
Sbjct: 145 KLDNILLDKDGHIKIADFG-MCKENMLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWS 203

Query: 89  FACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELI 125
           F    +E+  G   F         +DE+    +   I
Sbjct: 204 FGVLLYEMLIGQSPF-------HGQDEEE---LFHSI 230

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* Length = 373

 Score = 43.0 bits (102), Expect = 4e-05
 Identities = 24/99 (24%), Positives = 35/99 (35%), Gaps = 19/99 (19%)

Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTR------QYRAPEVILRAGYSFSVDM 86
           KPE  L        + DFG  C+ N        T       +Y APEV+ +  Y  +VD 
Sbjct: 166 KPENILLDSQGHIVLTDFG-LCKEN--IEHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDW 222

Query: 87  WSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELI 125
           W      +E+  G   F       +  +      M + I
Sbjct: 223 WCLGAVLYEMLYGLPPF-------YSRNTAE---MYDNI 251

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score = 42.8 bits (101), Expect = 4e-05
 Identities = 16/68 (23%), Positives = 29/68 (42%), Gaps = 10/68 (14%)

Query: 42  DMRCKVVDFGNACRANKQFAEEIQ-----TRQYRAPEVI-----LRAGYSFSVDMWSFAC 91
           ++   + DFG A +     +         TR+Y APEV+      +      +DM++   
Sbjct: 167 NLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGL 226

Query: 92  TAFELATG 99
             +ELA+ 
Sbjct: 227 VLWELASR 234

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} Length = 353

 Score = 42.6 bits (101), Expect = 4e-05
 Identities = 25/101 (24%), Positives = 37/101 (36%), Gaps = 15/101 (14%)

Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQ----TRQYRAPEVILRAGYSFSVDMWS 88
           K +  L   +  CK+ DFG  C+              T  Y APE++    Y  +VD W+
Sbjct: 151 KLDNVLLDHEGHCKLADFG-MCKEGICNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWA 209

Query: 89  FACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMP 129
                +E+  G   F         E+ED    + E I    
Sbjct: 210 MGVLLYEMLCGHAPF-------EAENEDD---LFEAILNDE 240

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323

 Score = 42.7 bits (101), Expect = 5e-05
 Identities = 42/207 (20%), Positives = 61/207 (29%), Gaps = 55/207 (26%)

Query: 33  KPERCL-DGIDMRCKVVDFGNACRANKQFAEEI-QTR----QYRAPEVILRAGYS-FSVD 85
           KPE  L D      K+ DFG A        E +         Y APE++ R  +    VD
Sbjct: 132 KPENLLLDE-RDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVD 190

Query: 86  MWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDR 145
           +WS  C       G +L A                M  L G++P             +D+
Sbjct: 191 VWS--C-------GIVLTA----------------M--LAGELP-------------WDQ 210

Query: 146 HGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 205
             D  +            L    +   +        L  +L   P  R T     +  W 
Sbjct: 211 PSDSCQEYSDWK-EKKTYLNPWKKID-SAPL---ALLHKILVENPSARITIPDIKKDRWY 265

Query: 206 --SLRNSTRDETKNKSNVEKVDVGMSK 230
              L+   +        V +   G SK
Sbjct: 266 NKPLKKGAKRPRVTSGGVSESPSGFSK 292

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score = 42.4 bits (100), Expect = 5e-05
 Identities = 18/80 (22%), Positives = 29/80 (36%), Gaps = 13/80 (16%)

Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQ-------TRQYRAPEVILRAG------ 79
           K +  L   +  C + D G A +      E          T++Y  PEV+  +       
Sbjct: 169 KSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQ 228

Query: 80  YSFSVDMWSFACTAFELATG 99
                DM+SF    +E+A  
Sbjct: 229 SYIMADMYSFGLILWEVARR 248

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355

 Score = 42.3 bits (100), Expect = 7e-05
 Identities = 20/74 (27%), Positives = 31/74 (41%), Gaps = 8/74 (10%)

Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQ-----TRQYRAPEVIL--RAGYSFSVD 85
           K E  L   +    + DFG   +       E       T +Y AP+++    +G+  +VD
Sbjct: 186 KLENILLDSNGHVVLTDFG-LSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVD 244

Query: 86  MWSFACTAFELATG 99
            WS     +EL TG
Sbjct: 245 WWSLGVLMYELLTG 258

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305

 Score = 41.9 bits (99), Expect = 7e-05
 Identities = 34/181 (18%), Positives = 56/181 (30%), Gaps = 57/181 (31%)

Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEI-QTRQ----YRAPEVIL-RAGYS-FSVD 85
           KP   L       K+   G A   +   A++  +T Q    ++ PE+      +S F VD
Sbjct: 136 KPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVD 195

Query: 86  MWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDR 145
           +WS   T + + TG   F          + D++        K+   I  G          
Sbjct: 196 IWSAGVTLYNITTGLYPF----------EGDNIY-------KLFENIGKGSYAIPGDCGP 238

Query: 146 HGDLKR-IRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPW 204
              L   ++ +       L  +                       P KR + +Q  QH W
Sbjct: 239 --PLSDLLKGM-------LEYE-----------------------PAKRFSIRQIRQHSW 266

Query: 205 L 205
            
Sbjct: 267 F 267

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score = 41.9 bits (99), Expect = 8e-05
 Identities = 18/71 (25%), Positives = 30/71 (42%), Gaps = 22/71 (30%)

Query: 45  CKVVDFGNACRANKQFAEEIQTRQYR----------APEVILR-----AGYSFSVDMWSF 89
            ++ DFG +       A+ ++T Q R          APEV++        Y +  D+WS 
Sbjct: 156 IRLADFGVS-------AKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSL 208

Query: 90  ACTAFELATGD 100
             T  E+A  +
Sbjct: 209 GITLIEMAQIE 219

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score = 40.4 bits (95), Expect = 3e-04
 Identities = 18/43 (41%), Positives = 26/43 (60%), Gaps = 4/43 (9%)

Query: 164 LVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLS 206
           L+   ++S     EF +FL   LD  PE RP+A Q L+HP++S
Sbjct: 242 LLTPSKWS----VEFRDFLKIALDKNPETRPSAAQLLEHPFVS 280

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score = 42.0 bits (99), Expect = 8e-05
 Identities = 22/62 (35%), Positives = 27/62 (43%), Gaps = 8/62 (12%)

Query: 44  RCKVVDFGNACRANKQ--FAEEIQTRQYRAPEVIL---RAGYSFSVDMWSFACTAFELAT 98
             K+ DFG+A        F   + T  + APEVIL      Y   VD+WS   T  ELA 
Sbjct: 192 LVKLGDFGSASIMAPANSF---VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAE 248

Query: 99  GD 100
             
Sbjct: 249 RK 250

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* Length = 353

 Score = 41.8 bits (99), Expect = 9e-05
 Identities = 27/99 (27%), Positives = 41/99 (41%), Gaps = 19/99 (19%)

Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTR------QYRAPEVILRAGYSFSVDM 86
           K +  +   +   K+ DFG  C+ N    + + T+       Y APE+I    Y  SVD 
Sbjct: 148 KLDNVMLDSEGHIKIADFG-MCKEN--IWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDW 204

Query: 87  WSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELI 125
           W+F    +E+  G   F         EDED    + + I
Sbjct: 205 WAFGVLLYEMLAGQAPF-------EGEDEDE---LFQSI 233

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336

 Score = 41.5 bits (98), Expect = 1e-04
 Identities = 35/177 (19%), Positives = 58/177 (32%), Gaps = 53/177 (29%)

Query: 33  KPERCLDGIDMRCKVVDFG--NACRANKQFAEEIQTRQYRAPEVILRAGYS-FSVDMWSF 89
           KPE  L   ++  K+ DFG  N             +  Y APEVI    Y+   VD+WS 
Sbjct: 135 KPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSC 194

Query: 90  ACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDL 149
               + +  G + F          D++ +  +        +K+        D+       
Sbjct: 195 GIVLYVMLVGRLPF----------DDEFIPNLF-------KKVNSCVYVMPDFLSP--GA 235

Query: 150 KR-IRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 205
           +  IRR+       ++ D                       P +R T Q+  + PW 
Sbjct: 236 QSLIRRM-------IVAD-----------------------PMQRITIQEIRRDPWF 262

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score = 41.6 bits (98), Expect = 1e-04
 Identities = 24/72 (33%), Positives = 30/72 (41%), Gaps = 22/72 (30%)

Query: 44  RCKVVDFGNACRANKQFAEEIQTRQYR----------APEVILR-----AGYSFSVDMWS 88
             K+VDFG +       A+  +T   R          APEVI       A Y F  D+WS
Sbjct: 167 EVKLVDFGVS-------AQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWS 219

Query: 89  FACTAFELATGD 100
              TA E+A G 
Sbjct: 220 LGITAIEMAEGA 231

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score = 41.6 bits (98), Expect = 1e-04
 Identities = 18/86 (20%), Positives = 26/86 (30%), Gaps = 17/86 (19%)

Query: 33  KPERCLDGIDMRCKVVDFGNAC-----------------RANKQFAEEIQTRQYRAPEVI 75
               CL   +    V DFG A                     K+    +    + APE+I
Sbjct: 135 NSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMI 194

Query: 76  LRAGYSFSVDMWSFACTAFELATGDM 101
               Y   VD++SF     E+     
Sbjct: 195 NGRSYDEKVDVFSFGIVLCEIIGRVN 220

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score = 41.5 bits (98), Expect = 1e-04
 Identities = 24/64 (37%), Positives = 30/64 (46%), Gaps = 8/64 (12%)

Query: 33  KPERCLDGIDMRCKVVDFGNA--CRANKQFAEEIQTRQYRAPEVILRA------GYSFSV 84
           KPE  L   DM  K+ DFG +      ++  E   T  Y APE+I  +      GY   V
Sbjct: 151 KPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEV 210

Query: 85  DMWS 88
           DMWS
Sbjct: 211 DMWS 214

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score = 40.3 bits (95), Expect = 2e-04
 Identities = 10/32 (31%), Positives = 17/32 (53%), Gaps = 2/32 (6%)

Query: 185 LLDFTPEKRPTAQQCLQHPWLSLRNSTRDETK 216
            L   P+KR TA++ L HP+   +    +E +
Sbjct: 267 FLVVQPQKRYTAEEALAHPF--FQQYVVEEVR 296

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437

 Score = 41.7 bits (98), Expect = 1e-04
 Identities = 31/160 (19%), Positives = 54/160 (33%), Gaps = 39/160 (24%)

Query: 33  KPERCLDGIDMR--CKVVDFGNACRANKQFAEEIQTR------QYRAPEVIL-----RAG 79
           KP+  L  +DM    ++ DFG+  +  +     +Q+        Y +PE++      +  
Sbjct: 202 KPDNIL--MDMNGHIRLADFGSCLKLMED--GTVQSSVAVGTPDYISPEILQAMEGGKGR 257

Query: 80  YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQS 139
           Y    D WS     +E+  G+  F           E  +      I  M  K        
Sbjct: 258 YGPECDWWSLGVCMYEMLYGETPF---------YAESLVE-TYGKI--MNHKERFQFPTQ 305

Query: 140 KDYFDRHG-DLKRIRRLKFWSLDRLLVDKYRFSETDAREF 178
                 +  DL  IRRL       +   ++R  +    +F
Sbjct: 306 VTDVSENAKDL--IRRL-------ICSREHRLGQNGIEDF 336

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score = 41.2 bits (97), Expect = 1e-04
 Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 8/64 (12%)

Query: 33  KPERCLDGIDMRCKVVDFGNAC--RANKQFAEEIQTRQYRAPEVILRA------GYSFSV 84
           KPE  L   +M+ ++ DFG +C     ++  E   T  Y APE++  +      GY   V
Sbjct: 227 KPENILLDDNMQIRLSDFGFSCHLEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEV 286

Query: 85  DMWS 88
           D+W+
Sbjct: 287 DLWA 290

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score = 40.5 bits (95), Expect = 2e-04
 Identities = 12/21 (57%), Positives = 14/21 (66%)

Query: 185 LLDFTPEKRPTAQQCLQHPWL 205
           LL   PE R TA+Q LQHP+ 
Sbjct: 343 LLQVDPEARLTAEQALQHPFF 363

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476

 Score = 41.3 bits (97), Expect = 2e-04
 Identities = 39/178 (21%), Positives = 56/178 (31%), Gaps = 55/178 (30%)

Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTR----QYRAPEVILRAGYS-FSVDMW 87
           KPE  L    M  K+ DFG +        E ++T      Y APEVI    Y+   VD+W
Sbjct: 143 KPENVLLDAHMNAKIADFGLS--NMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIW 200

Query: 88  SFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHG 147
           S     + L  G + F          D+DH+  +        +KI  G            
Sbjct: 201 SSGVILYALLCGTLPF----------DDDHVPTLF-------KKICDG------------ 231

Query: 148 DLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 205
                               +   +         L  +L   P KR T +   +H W 
Sbjct: 232 -------------------IFYTPQYLNPSVISLLKHMLQVDPMKRATIKDIREHEWF 270

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681

 Score = 41.4 bits (97), Expect = 2e-04
 Identities = 13/56 (23%), Positives = 25/56 (44%), Gaps = 2/56 (3%)

Query: 44  RCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATG 99
           + K++D G        F     T  ++APE++ R G + + D+++   T   L   
Sbjct: 219 QLKLIDLGAV-SRINSFGYLYGTPGFQAPEIV-RTGPTVATDIYTVGRTLAALTLD 272

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410

 Score = 41.2 bits (97), Expect = 2e-04
 Identities = 22/77 (28%), Positives = 31/77 (40%), Gaps = 12/77 (15%)

Query: 33  KPERCLDGIDMR--CKVVDFGNACRANKQFAEEIQ----TRQYRAPEVILRAG----YSF 82
           KP+  L  +D     K+ DFG   + NK+          T  Y +PEV+   G    Y  
Sbjct: 195 KPDNML--LDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGR 252

Query: 83  SVDMWSFACTAFELATG 99
             D WS     +E+  G
Sbjct: 253 ECDWWSVGVFLYEMLVG 269

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299

 Score = 40.0 bits (94), Expect = 3e-04
 Identities = 11/39 (28%), Positives = 16/39 (41%)

Query: 185 LLDFTPEKRPTAQQCLQHPWLSLRNSTRDETKNKSNVEK 223
           LL   P +R T  + + HPW+           + S V K
Sbjct: 240 LLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRVLK 278

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412

 Score = 39.7 bits (93), Expect = 5e-04
 Identities = 18/86 (20%), Positives = 33/86 (38%), Gaps = 19/86 (22%)

Query: 33  KPERCLDGIDMR--CKVVDFGNACRANKQFAEEIQTR------QYRAPEVILRAG----- 79
           KP+  L  +D     ++ DFG+  +        +++        Y +PE++   G     
Sbjct: 189 KPDNIL--LDRCGHIRLADFGSCLKLRAD--GTVRSLVAVGTPDYLSPEILQAVGGGPGT 244

Query: 80  --YSFSVDMWSFACTAFELATGDMLF 103
             Y    D W+    A+E+  G   F
Sbjct: 245 GSYGPECDWWALGVFAYEMFYGQTPF 270

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333

 Score = 39.2 bits (92), Expect = 6e-04
 Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 8/69 (11%)

Query: 37  CLDGIDMRCKVVDFGNACRANKQFAEEIQTRQ-----YR--APEVILRAGYSFSVDMWSF 89
            L   ++ CKV DFG + R  +   E   T        R  APE I    ++ + D+WSF
Sbjct: 178 ILVNSNLVCKVSDFGLS-RVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSF 236

Query: 90  ACTAFELAT 98
               +E+ T
Sbjct: 237 GIVMWEVMT 245

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score = 39.1 bits (91), Expect = 7e-04
 Identities = 18/94 (19%), Positives = 26/94 (27%), Gaps = 18/94 (19%)

Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQ-----------TRQYRAPEVI------ 75
                L   D  C + DFG + R                     T +Y APEV+      
Sbjct: 147 NSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNL 206

Query: 76  -LRAGYSFSVDMWSFACTAFELATGDMLFAPKSG 108
                    VDM++     +E+        P   
Sbjct: 207 RDXESALKQVDMYALGLIYWEIFMRCTDLFPGES 240

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373

 Score = 38.9 bits (91), Expect = 9e-04
 Identities = 17/69 (24%), Positives = 31/69 (44%), Gaps = 8/69 (11%)

Query: 37  CLDGIDMRCKVVDFGNACRANKQFAEEIQTRQ-------YRAPEVILRAGYSFSVDMWSF 89
            L   ++ CKV DFG   R  +   E   T +       + +PE I    ++ + D+WS+
Sbjct: 178 ILINSNLVCKVSDFGLG-RVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSY 236

Query: 90  ACTAFELAT 98
               +E+ +
Sbjct: 237 GIVLWEVMS 245

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	237
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	100.0
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	100.0
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	100.0
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	100.0
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	100.0
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	100.0
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	100.0
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	100.0
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	100.0
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	100.0
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	100.0
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	100.0
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	100.0
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	100.0
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	100.0
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	100.0
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	100.0
4aoj_A	329	High affinity nerve growth factor receptor; transf	100.0
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	100.0
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	100.0
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	100.0
3niz_A	311	Rhodanese family protein; structural genomics, str	100.0
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	100.0
3rp9_A	458	Mitogen-activated protein kinase; structural genom	100.0
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	100.0
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	100.0
3o0g_A	292	Cell division protein kinase 5; kinase activator c	100.0
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	100.0
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	100.0
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	100.0
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	100.0
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	100.0
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	100.0
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	100.0
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	100.0
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	100.0
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	100.0
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	100.0
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	100.0
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	100.0
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	100.0
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	100.0
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	100.0
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	100.0
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	100.0
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	100.0
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	100.0
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	100.0
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	100.0
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	100.0
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	100.0
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	100.0
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	100.0
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	100.0
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	100.0
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	100.0
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	100.0
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	100.0
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	100.0
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	100.0
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	100.0
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	100.0
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	100.0
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	100.0
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	100.0
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	100.0
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	99.98
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	99.98
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	99.98
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	99.98
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	99.98
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.98
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	99.98
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	99.98
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	99.98
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	99.98
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	99.98
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	99.97
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	99.97
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	99.97
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	99.97
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	99.97
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	99.97
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	99.97
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	99.97
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	99.97
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	99.97
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	99.97
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	99.97
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	99.97
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	99.97
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	99.97
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	99.97
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	99.97
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	99.97
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	99.97
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	99.97
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	99.97
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	99.97
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	99.97
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	99.97
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	99.97
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	99.97
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	99.97
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	99.97
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	99.97
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	99.97
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	99.97
3fme_A	290	Dual specificity mitogen-activated protein kinase;	99.97
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	99.97
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	99.97
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	99.97
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.97
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	99.97
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.97
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	99.97
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	99.97
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	99.97
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	99.97
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	99.97
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	99.97
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	99.97
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.97
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	99.97
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	99.97
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.97
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.97
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	99.97
3an0_A	340	Dual specificity mitogen-activated protein kinase;	99.97
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	99.97
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	99.97
3bhy_A	283	Death-associated protein kinase 3; death associate	99.97
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	99.97
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	99.96
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	99.96
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	99.96
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	99.96
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	99.96
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.96
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	99.96
3ork_A	311	Serine/threonine protein kinase; structural genomi	99.96
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	99.96
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	99.96
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	99.96
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	99.96
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	99.96
2dyl_A	318	Dual specificity mitogen-activated protein kinase	99.96
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	99.96
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	99.96
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	99.96
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.96
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	99.96
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	99.96
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	99.96
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	99.96
3aln_A	327	Dual specificity mitogen-activated protein kinase;	99.96
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	99.96
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	99.96
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	99.96
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	99.96
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	99.96
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	99.96
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	99.96
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	99.96
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	99.96
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	99.96
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	99.96
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	99.96
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	99.96
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	99.96
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	99.96
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	99.95
3q4u_A	301	Activin receptor type-1; structural genomics conso	99.95
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	99.95
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	99.95
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	99.95
3soc_A	322	Activin receptor type-2A; structural genomics cons	99.95
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.95
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	99.95
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	99.95
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	99.95
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	99.95
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.95
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	99.95
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	99.95
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	99.95
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	99.95
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	99.95
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	99.95
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	99.95
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	99.95
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	99.95
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	99.95
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	99.95
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	99.95
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	99.95
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	99.95
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	99.95
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	99.95
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	99.95
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	99.95
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.95
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	99.95
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	99.95
2a19_B	284	Interferon-induced, double-stranded RNA-activated	99.95
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	99.95
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	99.95
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	99.95
3pls_A	298	Macrophage-stimulating protein receptor; protein k	99.95
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.95
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	99.95
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	99.95
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	99.95
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	99.95
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.95
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	99.95
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	99.95
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	99.95
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	99.94
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	99.94
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	99.94
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	99.94
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	99.94
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.94
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.94
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	99.94
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	99.94
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	99.94
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	99.94
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	99.94
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.94
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	99.94
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	99.94
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	99.94
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	99.94
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	99.94
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.94
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	99.94
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	99.94
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	99.94
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	99.94
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	99.93
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	99.93
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	99.93
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	99.92
3uqc_A	286	Probable conserved transmembrane protein; structur	99.86
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	99.76
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	99.49
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	99.22
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	98.97
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	98.4
3sg8_A	304	APH(2'')-ID; antibiotic resistance enzyme, transfe	96.94
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	96.79
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	96.69
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	96.48
2yle_A	229	Protein spire homolog 1; actin-binding protein, ac	96.43
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	94.65
2q83_A	346	YTAA protein; 2635576, structural genomics, joint	93.93
3tdw_A	306	Gentamicin resistance protein; kinase, phosphoryl	92.44
2pyw_A	420	Uncharacterized protein; 5-methylthioribose kinase	92.15
3csv_A	333	Aminoglycoside phosphotransferase; YP_614837.1, ph	87.7
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	87.57
3ats_A	357	Putative uncharacterized protein; hypothetical pro	86.96
3ovc_A	362	Hygromycin-B 4-O-kinase; aminoglycoside phosphotra	86.6
2ppq_A	322	HSK, HK, homoserine kinase; structural genomics, M	86.37
1zyl_A	328	Hypothetical protein YIHE; putative protein kinase	85.17
3c5i_A	369	Choline kinase; choline, kinase, malaria, transfer	81.72
3i1a_A	339	Spectinomycin phosphotransferase; protein kinase,	80.58

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=100.00  E-value=4.1e-42  Score=276.75  Aligned_cols=165  Identities=21%  Similarity=0.254  Sum_probs=139.2

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCc-----CcccCcCCCcccchHHhh
Q 026540            2 TIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK-----QFAEEIQTRQYRAPEVIL   76 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~-----~~~~~~~~~~~~~PE~~~   76 (237)
                      .++|.+++.+++|++.||.|+|+.+|+||||||+|||++.++.+||+|||+|.....     .....+||+.|+|||++.
T Consensus       128 ~l~e~~~~~~~~qi~~al~ylH~~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~~~~~~~~~GTp~YmAPEvl~  207 (311)
T 4aw0_A          128 SFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLT  207 (311)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTTTCCCBCCCCSCGGGCCHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCCcccccCcccCcccCCHHHHc
Confidence            378999999999999999999999999999999999999999999999999976531     234568999999999999


Q ss_pred             hcCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcccc
Q 026540           77 RAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLK  156 (237)
Q Consensus        77 ~~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (237)
                      +..|+.++|+||+||++|+|++|..||.+.+      .......+.                                  
T Consensus       208 ~~~y~~~~DiWSlGvilyeml~G~~PF~~~~------~~~~~~~i~----------------------------------  247 (311)
T 4aw0_A          208 EKSACKSSDLWALGCIIYQLVAGLPPFRAGN------EGLIFAKII----------------------------------  247 (311)
T ss_dssp             HSCBCHHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHH----------------------------------
T ss_pred             CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHH----------------------------------
Confidence            9999999999999999999999999997653      222222221                                  


Q ss_pred             CCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHH------HhcCCCcCcccCCccc
Q 026540          157 FWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQ------CLQHPWLSLRNSTRDE  214 (237)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e------ll~hp~f~~~~~~~~~  214 (237)
                              .....++..+++++.+||.+||+.||++|+|++|      +++||||++.++....
T Consensus       248 --------~~~~~~p~~~s~~~~dli~~lL~~dp~~R~t~~e~~~~~~i~~Hp~F~~idw~~l~  303 (311)
T 4aw0_A          248 --------KLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLH  303 (311)
T ss_dssp             --------HTCCCCCTTCCHHHHHHHHHHSCSSGGGSTTSGGGTCHHHHHTSGGGTTCCCTTGG
T ss_pred             --------cCCCCCCcccCHHHHHHHHHHccCCHhHCcChHHHcCCHHHHCCCCcCCCCHHHhc
Confidence                    1223344556788999999999999999999988      5899999998876653

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=100.00  E-value=2.9e-41  Score=275.56  Aligned_cols=163  Identities=23%  Similarity=0.328  Sum_probs=135.2

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCc---CcccCcCCCcccchHHhhhc
Q 026540            2 TIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK---QFAEEIQTRQYRAPEVILRA   78 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~---~~~~~~~~~~~~~PE~~~~~   78 (237)
                      .++|.+++.++.|++.||.|+|+.+|+||||||+|||++.++.+||+|||++.....   .....+||+.|+|||++.+.
T Consensus       166 ~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~~~GTp~YmAPEvl~~~  245 (346)
T 4fih_A          166 RMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELISRL  245 (346)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCBCCCCSCGGGCCHHHHTTC
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEECCCCCEEEecCcCceecCCCCCcccccccCcCcCCHHHHCCC
Confidence            478999999999999999999999999999999999999999999999999976542   34567899999999999988


Q ss_pred             CCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCC
Q 026540           79 GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFW  158 (237)
Q Consensus        79 ~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (237)
                      .|+.++||||+||++|+|++|..||.+.+      ....+..+...   .+                             
T Consensus       246 ~y~~~~DiWSlGvilyeml~G~~PF~~~~------~~~~~~~i~~~---~~-----------------------------  287 (346)
T 4fih_A          246 PYGPEVDIWSLGIMVIEMVDGEPPYFNEP------PLKAMKMIRDN---LP-----------------------------  287 (346)
T ss_dssp             CBCTHHHHHHHHHHHHHHHHSSCTTTTSC------HHHHHHHHHHS---SC-----------------------------
T ss_pred             CCCcHHHHHHHHHHHHHHHHCCCCCCCcC------HHHHHHHHHcC---CC-----------------------------
Confidence            99999999999999999999999997653      33333332211   00                             


Q ss_pred             chhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCccc
Q 026540          159 SLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRN  209 (237)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~  209 (237)
                             .....+..+++++.+||.+||+.||++|||++|+|+||||+...
T Consensus       288 -------~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~Hp~~~~~~  331 (346)
T 4fih_A          288 -------PRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAG  331 (346)
T ss_dssp             -------CCCSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGCC
T ss_pred             -------CCCCccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCHhhcCCC
Confidence                   00111234578899999999999999999999999999998543

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=100.00  E-value=1.3e-41  Score=273.70  Aligned_cols=164  Identities=23%  Similarity=0.279  Sum_probs=137.4

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecC---cCcccCcCCCcccchHHhhhc
Q 026540            2 TIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRAN---KQFAEEIQTRQYRAPEVILRA   78 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~---~~~~~~~~~~~~~~PE~~~~~   78 (237)
                      .++|.+++.+++|++.||+|+|+.+|+||||||+|||++.++.+||+|||+|+...   ......+||+.|+|||++.+.
T Consensus       122 ~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~~~GT~~YmAPE~~~~~  201 (304)
T 3ubd_A          122 MFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRR  201 (304)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTSCEEEESSEEEEC-----CCCCSCCCCGGGCCHHHHHTS
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHeEEcCCCCEEecccccceeccCCCccccccccCcccCCHHHhccC
Confidence            36899999999999999999999999999999999999999999999999997532   334567899999999999999


Q ss_pred             CCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCC
Q 026540           79 GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFW  158 (237)
Q Consensus        79 ~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (237)
                      .|+.++|+||+||++|+|++|..||.+.+      ....+..+.+                                   
T Consensus       202 ~y~~~~DiwSlGvilyemltG~~PF~~~~------~~~~~~~i~~-----------------------------------  240 (304)
T 3ubd_A          202 GHTQSADWWSFGVLMFEMLTGTLPFQGKD------RKETMTMILK-----------------------------------  240 (304)
T ss_dssp             CCCTHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHH-----------------------------------
T ss_pred             CCCCCCcccchHHHHHHHHhCCCCCCCcC------HHHHHHHHHc-----------------------------------
Confidence            99999999999999999999999998653      3333332221                                   


Q ss_pred             chhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCC-----HHHHhcCCCcCcccCCcc
Q 026540          159 SLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPT-----AQQCLQHPWLSLRNSTRD  213 (237)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t-----~~ell~hp~f~~~~~~~~  213 (237)
                             .....+..+++++.+||.+||+.||++|||     ++|+++||||++.++...
T Consensus       241 -------~~~~~p~~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~Hp~f~~idw~~l  293 (304)
T 3ubd_A          241 -------AKLGMPQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTIDWNKL  293 (304)
T ss_dssp             -------CCCCCCTTSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHTSGGGTTCCHHHH
T ss_pred             -------CCCCCCCcCCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHcCccccCCCHHHH
Confidence                   122334456788999999999999999998     589999999998876544

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=100.00  E-value=4e-41  Score=277.97  Aligned_cols=203  Identities=23%  Similarity=0.251  Sum_probs=143.6

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCC-CcEEEeecCcceecCc----------------------
Q 026540            2 TIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGID-MRCKVVDFGNACRANK----------------------   58 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~-~~~kl~dfg~~~~~~~----------------------   58 (237)
                      .+++.+++.+++|++.||+|+|+.+|+||||||+|||++.+ +.+||+|||+|+....                      
T Consensus       113 ~l~~~~~~~~~~qll~al~ylH~~gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (361)
T 4f9c_A          113 SLSFQEVREYMLNLFKALKRIHQFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLKFVQSEAQQERCSQNK  192 (361)
T ss_dssp             TCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEECTTCSCGGGGGC-------------
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCeEeCcCCHHHeEEeCCCCeEEECcCCCCcccCCcccccccccccccccccccccc
Confidence            36789999999999999999999999999999999999876 7999999999964321                      


Q ss_pred             ---------CcccCcCCCcccchHHhhhc-CCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCC
Q 026540           59 ---------QFAEEIQTRQYRAPEVILRA-GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKM  128 (237)
Q Consensus        59 ---------~~~~~~~~~~~~~PE~~~~~-~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~  128 (237)
                               ..+..+||+.|+|||++.+. .++.++|+||+||++++|++|+.||.+..     ++.+++..+..+.|.+
T Consensus       193 ~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~~~-----~~~~~l~~I~~~~G~~  267 (361)
T 4f9c_A          193 CSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKAS-----DDLTALAQIMTIRGSR  267 (361)
T ss_dssp             -------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSCCS-----SHHHHHHHHHHHHCHH
T ss_pred             ccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCCCC-----CHHHHHHHHHHhcCCc
Confidence                     12345799999999999876 48999999999999999999999997665     6889999999998875


Q ss_pred             CHHHHhcCCCchhhhcc-cC--ccch----hccccC-C-chhH---HhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCH
Q 026540          129 PRKIAIGGAQSKDYFDR-HG--DLKR----IRRLKF-W-SLDR---LLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTA  196 (237)
Q Consensus       129 ~~~~~~~~~~~~~~~~~-~~--~~~~----~~~~~~-~-~~~~---~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~  196 (237)
                      +................ ..  ....    ...... . ....   ............++++.|||.+||++||++|+|+
T Consensus       268 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~is~~a~DLl~~lL~~dP~~R~ta  347 (361)
T 4f9c_A          268 ETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQGHATNLEGWNEVPDEAYDLLDKLLDLNPASRITA  347 (361)
T ss_dssp             HHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC----------------------CTTCCHHHHHHHHHHTCSCTTTSCCH
T ss_pred             cchhhhhhccccccccccCcchhhhHHHHhhccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCH
Confidence            44433211110000000 00  0000    000000 0 0000   0000111233457889999999999999999999


Q ss_pred             HHHhcCCCcCccc
Q 026540          197 QQCLQHPWLSLRN  209 (237)
Q Consensus       197 ~ell~hp~f~~~~  209 (237)
                      +|+|+||||++.+
T Consensus       348 ~eaL~Hp~f~~i~  360 (361)
T 4f9c_A          348 EEALLHPFFKDMS  360 (361)
T ss_dssp             HHHHTSGGGTTC-
T ss_pred             HHHhcCcccCCCC
Confidence            9999999998753

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=100.00  E-value=2e-40  Score=276.63  Aligned_cols=193  Identities=22%  Similarity=0.315  Sum_probs=150.7

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecC-------cCcccCcCCCcccchHH
Q 026540            2 TIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRAN-------KQFAEEIQTRQYRAPEV   74 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~-------~~~~~~~~~~~~~~PE~   74 (237)
                      .+++.+++.+++|++.||+|+|+.+|+||||||+|||++.++.+||+|||+++...       ......+||+.|+|||+
T Consensus       154 ~l~~~~~~~~~~qil~al~ylH~~~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~Y~APEv  233 (398)
T 4b99_A          154 PLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPEL  233 (398)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEECCCTTCBCC-------CCCCCSSCCCCTTCCHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCcCcCCCcCccccccCCCCCEEEeecceeeecccCccccccccccceeChHhcCHHH
Confidence            37899999999999999999999999999999999999999999999999996542       23345689999999999


Q ss_pred             hhhcC-CCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCch--hhhcccCccch
Q 026540           75 ILRAG-YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSK--DYFDRHGDLKR  151 (237)
Q Consensus        75 ~~~~~-~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~  151 (237)
                      +.+.. ++.++|+||+||++++|++|..||.+.      ...+++..+....|.++...+.......  .+.....    
T Consensus       234 ~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~------~~~~~l~~I~~~~g~p~~~~~~~~~~~~~~~~~~~~~----  303 (398)
T 4b99_A          234 MLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGK------NYVHQLQLIMMVLGTPSPAVIQAVGAERVRAYIQSLP----  303 (398)
T ss_dssp             HTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCS------SHHHHHHHHHHHHCCCCGGGTC-----CHHHHHHSSC----
T ss_pred             hcCCCCCCChhheehhHHHHHHHHHCCCCCCCC------CHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcCC----
Confidence            98764 699999999999999999999999877      4889999999999988876543221111  1111100    


Q ss_pred             hccccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccCCcc
Q 026540          152 IRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNSTRD  213 (237)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~~~~  213 (237)
                        .....++...       ....++++.+||.+||++||.+|+|++|+|+||||+.......
T Consensus       304 --~~~~~~~~~~-------~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~~~p~~  356 (398)
T 4b99_A          304 --PRQPVPWETV-------YPGADRQALSLLGRMLRFEPSARISAAAALRHPFLAKYHDPDD  356 (398)
T ss_dssp             --CCCCCCHHHH-------STTCCHHHHHHHHHHSCSSTTTSCCHHHHTTSGGGTTTCCGGG
T ss_pred             --CcCCCCHHHh-------CCCCCHHHHHHHHHHCcCChhHCcCHHHHhcCHhhCcCCCCcc
Confidence              0001111111       1234678899999999999999999999999999997754433

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=100.00  E-value=3.5e-41  Score=267.69  Aligned_cols=158  Identities=19%  Similarity=0.254  Sum_probs=124.3

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCc--CcccCcCCCcccchHHhhhcC
Q 026540            2 TIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK--QFAEEIQTRQYRAPEVILRAG   79 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~--~~~~~~~~~~~~~PE~~~~~~   79 (237)
                      .++|.+++.+++|++.||+|+|+.+++||||||+|||++.++.+||+|||+|.....  .....+||+.|+|||++.+..
T Consensus       108 ~l~e~~~~~~~~qi~~al~ylH~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~~~~~~~GT~~Y~APE~~~~~~  187 (275)
T 3hyh_A          108 KMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKL  187 (275)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTCCEEECCSSCC---------------CTTSCHHHHSSSS
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCcccccCChHHeEECCCCCEEEeecCCCeecCCCCccCCeeECcccCChhhhcCCC
Confidence            378999999999999999999999999999999999999999999999999965442  334568999999999998887


Q ss_pred             C-CchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCC
Q 026540           80 Y-SFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFW  158 (237)
Q Consensus        80 ~-~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (237)
                      + +.++|+||+||++|+|++|+.||.+.+      .......+                                     
T Consensus       188 y~~~~~DiwSlGvily~lltg~~PF~~~~------~~~~~~~i-------------------------------------  224 (275)
T 3hyh_A          188 YAGPEVDVWSCGVILYVMLCRRLPFDDES------IPVLFKNI-------------------------------------  224 (275)
T ss_dssp             CCCTHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHH-------------------------------------
T ss_pred             CCCChhhhHHHHHHHHHHHHCCCCCCCCC------HHHHHHHH-------------------------------------
Confidence            6 679999999999999999999997642      22222211                                     


Q ss_pred             chhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCc
Q 026540          159 SLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSL  207 (237)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~  207 (237)
                           ......++...++++.+||.+||+.||++|||++|+++||||+.
T Consensus       225 -----~~~~~~~p~~~s~~~~~li~~~L~~dP~~R~s~~eil~hpw~k~  268 (275)
T 3hyh_A          225 -----SNGVYTLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFKV  268 (275)
T ss_dssp             -----HHTCCCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHCHHHHT
T ss_pred             -----HcCCCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHcCccccc
Confidence                 11122334456788999999999999999999999999999963

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=100.00  E-value=2e-40  Score=276.91  Aligned_cols=162  Identities=23%  Similarity=0.329  Sum_probs=134.7

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCc---CcccCcCCCcccchHHhhhc
Q 026540            2 TIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK---QFAEEIQTRQYRAPEVILRA   78 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~---~~~~~~~~~~~~~PE~~~~~   78 (237)
                      .++|.+++.+++|++.||.|+|+.+|+||||||+|||++.++.+||+|||++.....   .....+||+.|+|||++.+.
T Consensus       243 ~l~e~~~~~~~~qil~aL~ylH~~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~~~GTp~YmAPEvl~~~  322 (423)
T 4fie_A          243 RMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELISRL  322 (423)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSTTTEEECTTCCEEECCCTTCEECCSSCCCBCCCEECTTTCCHHHHTTC
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCCCEEEecCccceECCCCCccccccccCcCcCCHHHHCCC
Confidence            478999999999999999999999999999999999999999999999999976542   34466899999999999988


Q ss_pred             CCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCC
Q 026540           79 GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFW  158 (237)
Q Consensus        79 ~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (237)
                      .|+.++||||+||++|+|++|..||.+.+      ....+..+...   .+                             
T Consensus       323 ~y~~~~DiWSlGvilyeml~G~~PF~~~~------~~~~~~~i~~~---~~-----------------------------  364 (423)
T 4fie_A          323 PYGPEVDIWSLGIMVIEMVDGEPPYFNEP------PLKAMKMIRDN---LP-----------------------------  364 (423)
T ss_dssp             CBCTHHHHHHHHHHHHHHHHSSCTTTTSC------HHHHHHHHHHS---CC-----------------------------
T ss_pred             CCCcHHHHHHHHHHHHHHHHCCCCCCCcC------HHHHHHHHHcC---CC-----------------------------
Confidence            99999999999999999999999997653      33333332211   00                             


Q ss_pred             chhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcc
Q 026540          159 SLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLR  208 (237)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~  208 (237)
                             ........+++++.+||.+||+.||++|+|++|+|+||||+..
T Consensus       365 -------~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~ell~Hp~~~~~  407 (423)
T 4fie_A          365 -------PRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKA  407 (423)
T ss_dssp             -------CCCSCTTSSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGC
T ss_pred             -------CCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCHHhcCC
Confidence                   0011223457889999999999999999999999999999854

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=100.00  E-value=2.1e-40  Score=270.92  Aligned_cols=159  Identities=18%  Similarity=0.222  Sum_probs=133.1

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC---cccCcCCCcccchHHhhhcC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ---FAEEIQTRQYRAPEVILRAG   79 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~~~~PE~~~~~~   79 (237)
                      ++|.+++.++.|++.||.|+|+.+|+||||||+|||++.++.+||+|||+++.....   ....+||+.|+|||++.+..
T Consensus       122 ~~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~~~GT~~YmAPE~l~~~~  201 (350)
T 4b9d_A          122 FQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACIGTPYYLSPEICENKP  201 (350)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTCEETTCCGGGEEECTTCCEEECSTTEESCCCHHHHHHHHHHSCCTTCCHHHHTTCC
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCCEEEcccccceeecCCcccccccCCCccccCHHHHCCCC
Confidence            578999999999999999999999999999999999999999999999999765432   23457999999999999999


Q ss_pred             CCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCc
Q 026540           80 YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWS  159 (237)
Q Consensus        80 ~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (237)
                      |+.++|+||+||++|+|++|+.||.+.+      ....+..+...  ..                               
T Consensus       202 y~~~~DiwSlGvilyemltG~~PF~~~~------~~~~~~~i~~~--~~-------------------------------  242 (350)
T 4b9d_A          202 YNNKSDIWALGCVLYELCTLKHAFEAGS------MKNLVLKIISG--SF-------------------------------  242 (350)
T ss_dssp             CCHHHHHHHHHHHHHHHHHSSCSCCCSS------HHHHHHHHHHT--CC-------------------------------
T ss_pred             CCcHHHHHHHHHHHHHHHHCCCCCCCcC------HHHHHHHHHcC--CC-------------------------------
Confidence            9999999999999999999999997653      33333322111  00                               


Q ss_pred             hhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcc
Q 026540          160 LDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLR  208 (237)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~  208 (237)
                              ...+..++.++.+||.+||+.||++|||++|+|+||||+..
T Consensus       243 --------~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~hp~~~~~  283 (350)
T 4b9d_A          243 --------PPVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILEKGFIAKR  283 (350)
T ss_dssp             --------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSHHHHTT
T ss_pred             --------CCCCccCCHHHHHHHHHHccCChhHCcCHHHHhcCHHhhcC
Confidence                    01233457889999999999999999999999999999854

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=100.00  E-value=1.1e-39  Score=261.12  Aligned_cols=159  Identities=16%  Similarity=0.190  Sum_probs=126.0

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhc--CCccCCCCCccccCC-CCcEEEeecCcceecC-cCcccCcCCCcccchHHhhhc
Q 026540            3 IVEKKLKRRAKRAVANISIRRASM--GGIELPKPERCLDGI-DMRCKVVDFGNACRAN-KQFAEEIQTRQYRAPEVILRA   78 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~--~~h~d~kp~Nili~~-~~~~kl~dfg~~~~~~-~~~~~~~~~~~~~~PE~~~~~   78 (237)
                      +++.+++.++.|++.||+|+|+.+  |+||||||+|||++. ++.+||+|||+|.... ......+||+.|+|||++. +
T Consensus       126 l~~~~~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~~~~~~~~GTp~YmAPE~~~-~  204 (290)
T 3fpq_A          126 MKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAVIGTPEFMAPEMYE-E  204 (290)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHTSSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCTTSBEESCSSCCCCCGGGGG-T
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCCCEEecccChhheeEECCCCCEEEEeCcCCEeCCCCccCCcccCccccCHHHcC-C
Confidence            678999999999999999999998  999999999999975 7899999999996543 3344668999999999885 4


Q ss_pred             CCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCC
Q 026540           79 GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFW  158 (237)
Q Consensus        79 ~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (237)
                      .|+.++||||+||++|+|++|..||.+..      +...+..  .+.....+                            
T Consensus       205 ~y~~~~DiwSlGvilyelltg~~Pf~~~~------~~~~~~~--~i~~~~~~----------------------------  248 (290)
T 3fpq_A          205 KYDESVDVYAFGMCMLEMATSEYPYSECQ------NAAQIYR--RVTSGVKP----------------------------  248 (290)
T ss_dssp             CCCTHHHHHHHHHHHHHHHHSSCTTTTCS------SHHHHHH--HHTTTCCC----------------------------
T ss_pred             CCCcHHHHHHHHHHHHHHHHCCCCCCCCC------cHHHHHH--HHHcCCCC----------------------------
Confidence            69999999999999999999999997542      2111111  11100000                            


Q ss_pred             chhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCc
Q 026540          159 SLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSL  207 (237)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~  207 (237)
                               ...+...++++.+||.+||+.||.+|||++|+|+||||+.
T Consensus       249 ---------~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~Hp~~~~  288 (290)
T 3fpq_A          249 ---------ASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQE  288 (290)
T ss_dssp             ---------GGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGC-
T ss_pred             ---------CCCCccCCHHHHHHHHHHccCChhHCcCHHHHhcCccccC
Confidence                     0011223567899999999999999999999999999974

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=100.00  E-value=7.3e-39  Score=260.64  Aligned_cols=164  Identities=19%  Similarity=0.171  Sum_probs=131.1

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCC-cEEEeecCcceecCcC--------cccCcCCCcccchH
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDM-RCKVVDFGNACRANKQ--------FAEEIQTRQYRAPE   73 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~-~~kl~dfg~~~~~~~~--------~~~~~~~~~~~~PE   73 (237)
                      |+|.+++.++.|++.||+|+|+.+|+||||||+|||++.++ .+||+|||++......        ....+||+.|+|||
T Consensus       147 l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~~~~~~~~~~GT~~YmAPE  226 (336)
T 4g3f_A          147 LPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPE  226 (336)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEECTTSCCEEECCCTTCEEC------------CCCCCCGGGCCHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCcccceecCCccccCccccCHH
Confidence            68999999999999999999999999999999999999987 6999999999754321        22357999999999


Q ss_pred             HhhhcCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhc
Q 026540           74 VILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIR  153 (237)
Q Consensus        74 ~~~~~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (237)
                      ++.+..|+.++|+||+||++|+|++|..||.+....      .....+..   ..+                        
T Consensus       227 ~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~------~~~~~i~~---~~~------------------------  273 (336)
T 4g3f_A          227 VVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRG------PLCLKIAS---EPP------------------------  273 (336)
T ss_dssp             HHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCS------CCHHHHHH---SCC------------------------
T ss_pred             HHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHH------HHHHHHHc---CCC------------------------
Confidence            999999999999999999999999999999765411      11111110   000                        


Q ss_pred             cccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHH-------------hcCCCcCcccCC
Q 026540          154 RLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQC-------------LQHPWLSLRNST  211 (237)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~el-------------l~hp~f~~~~~~  211 (237)
                                  .....+..+++.+.+||.+||+.||.+|||+.|+             ++|||+.....+
T Consensus       274 ------------~~~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~~~~l~hPw~~~~~~P  332 (336)
T 4g3f_A          274 ------------PIREIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQEVGGLKSPWKGEYKEP  332 (336)
T ss_dssp             ------------GGGGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTTSSCSCSSSSCCCC
T ss_pred             ------------CchhcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhhhhhccCCCcCCCCCC
Confidence                        0012345567889999999999999999999997             579999876543

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=100.00  E-value=1.4e-37  Score=259.79  Aligned_cols=205  Identities=45%  Similarity=0.837  Sum_probs=182.6

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhh-cCCccCCCCCccccCCCC--------------------------------------
Q 026540            3 IVEKKLKRRAKRAVANISIRRAS-MGGIELPKPERCLDGIDM--------------------------------------   43 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~-~~~h~d~kp~Nili~~~~--------------------------------------   43 (237)
                      +++.++..++.|++.||.|+|.. +++||||||+|||++.++                                      
T Consensus       143 ~~~~~~~~i~~qi~~aL~~lH~~~givHrDikp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (397)
T 1wak_A          143 LPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLV  222 (397)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTCEECCCCSGGGEEECCCHHHHHHHHHHHC---------------------CCTTSC
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHeeEeccchhhhhhhhhhHHHhhcCCCCCCCCccccCCcccccccc
Confidence            67889999999999999999998 999999999999999775                                      


Q ss_pred             -----------cEEEeecCcceecCcCcccCcCCCcccchHHhhhcCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCC
Q 026540           44 -----------RCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFC  112 (237)
Q Consensus        44 -----------~~kl~dfg~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~  112 (237)
                                 .++|+|||++...........+++.|+|||++.+..++.++|+||+||++++|++|..||.+.+.....
T Consensus       223 ~~~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~  302 (397)
T 1wak_A          223 NPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYT  302 (397)
T ss_dssp             CTTSGGGGGGCCEEECCGGGCEETTBCSCSCCSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSC
T ss_pred             cccccccccccceEeccccccccccccCccCCCCCcccCChhhcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccC
Confidence                       799999999987776667778899999999999999999999999999999999999999887655555


Q ss_pred             ChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCC
Q 026540          113 EDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEK  192 (237)
Q Consensus       113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~  192 (237)
                      .....+..+.+..+.++............++...+..........+............+...+..+.+||.+||+.||++
T Consensus       303 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~  382 (397)
T 1wak_A          303 RDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEK  382 (397)
T ss_dssp             HHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGG
T ss_pred             chHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccccCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhh
Confidence            57888999999999999998887777778887777776666666666777777777888889999999999999999999


Q ss_pred             CCCHHHHhcCCCcCc
Q 026540          193 RPTAQQCLQHPWLSL  207 (237)
Q Consensus       193 R~t~~ell~hp~f~~  207 (237)
                      |||++|+|+||||++
T Consensus       383 Rpt~~e~l~hp~~~~  397 (397)
T 1wak_A          383 RATAAECLRHPWLNS  397 (397)
T ss_dssp             SCCHHHHHTSGGGGC
T ss_pred             cCCHHHHhhCccccC
Confidence            999999999999973

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=100.00  E-value=8.2e-37  Score=253.41  Aligned_cols=207  Identities=37%  Similarity=0.703  Sum_probs=176.7

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhh-cCCccCCCCCccccC------CCCcEEEeecCcceecCcCcccCcCCCcccchHHh
Q 026540            3 IVEKKLKRRAKRAVANISIRRAS-MGGIELPKPERCLDG------IDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVI   75 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~-~~~h~d~kp~Nili~------~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~PE~~   75 (237)
                      +++..+..++.|++.||.|+|.. +++||||||+|||++      ..+.+||+|||++...........+++.|+|||++
T Consensus       128 ~~~~~~~~i~~qi~~aL~~lH~~~~ivH~Dikp~NIll~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~t~~y~aPE~~  207 (373)
T 1q8y_A          128 IPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQTREYRSPEVL  207 (373)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTTTEEEEEECCCTTCEETTBCCCSCCSCGGGCCHHHH
T ss_pred             CcHHHHHHHHHHHHHHHHHHHhcCCEEecCCChHHeEEeccCCCcCcceEEEcccccccccCCCCCCCCCCccccCcHHH
Confidence            67889999999999999999998 999999999999994      44589999999998777666677889999999999


Q ss_pred             hhcCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccc
Q 026540           76 LRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRL  155 (237)
Q Consensus        76 ~~~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (237)
                      .+..++.++|+||+|++++++++|..||.+............+..+.+.++.+|..+.........++...+.+......
T Consensus       208 ~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  287 (373)
T 1q8y_A          208 LGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKL  287 (373)
T ss_dssp             HTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCC
T ss_pred             hCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccc
Confidence            99899999999999999999999999998776555556788899999999999999888877777777777777777767


Q ss_pred             cCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCccc
Q 026540          156 KFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRN  209 (237)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~  209 (237)
                      ..++...........+...+..+.+||.+||+.||.+|||++|+++||||+...
T Consensus       288 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~  341 (373)
T 1q8y_A          288 KFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKDTL  341 (373)
T ss_dssp             CBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTCGGGTTCT
T ss_pred             cccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHHHHhhChhhhccc
Confidence            777788888888888899999999999999999999999999999999999764

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=100.00  E-value=2.2e-37  Score=249.37  Aligned_cols=158  Identities=18%  Similarity=0.203  Sum_probs=117.2

Q ss_pred             HHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC---------------cccCcCCCcc
Q 026540            5 EKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ---------------FAEEIQTRQY   69 (237)
Q Consensus         5 ~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~---------------~~~~~~~~~~   69 (237)
                      +..++.++.|++.||+|+|+.+|+||||||+|||++.++.+||+|||+|......               .+..+||+.|
T Consensus       117 ~~~~~~i~~qi~~al~ylH~~~IiHRDlKp~NILl~~~~~vKl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y  196 (299)
T 4g31_A          117 RSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLY  196 (299)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCCCC--------------------------CCCTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHCcCccccCcHHHeEECCCCcEEEccCccceecCCCccccccccccccccccCCcccCccc
Confidence            4568899999999999999999999999999999999999999999998654321               2235799999


Q ss_pred             cchHHhhhcCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHC-CCCHHHHhcCCCchhhhcccCc
Q 026540           70 RAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIG-KMPRKIAIGGAQSKDYFDRHGD  148 (237)
Q Consensus        70 ~~PE~~~~~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  148 (237)
                      +|||++.+..|+.++|+||+||++|+|++   ||.+        .......+..+.. ..|+.                 
T Consensus       197 mAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~--------~~~~~~~~~~~~~~~~p~~-----------------  248 (299)
T 4g31_A          197 MSPEQIHGNSYSHKVDIFSLGLILFELLY---PFST--------QMERVRTLTDVRNLKFPPL-----------------  248 (299)
T ss_dssp             SCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSS--------HHHHHHHHHHHHTTCCCHH-----------------
T ss_pred             cCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCC--------ccHHHHHHHHHhcCCCCCC-----------------
Confidence            99999999999999999999999999996   6642        2222222222211 11110                 


Q ss_pred             cchhccccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccCCc
Q 026540          149 LKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNSTR  212 (237)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~~~  212 (237)
                                            ....++.+.+||.+||+.||.+|||+.|+++||||.+.+...
T Consensus       249 ----------------------~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~~~~~p~  290 (299)
T 4g31_A          249 ----------------------FTQKYPCEYVMVQDMLSPSPMERPEAINIIENAVFEDLDFPG  290 (299)
T ss_dssp             ----------------------HHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGCCC----
T ss_pred             ----------------------CcccCHHHHHHHHHHcCCChhHCcCHHHHhcCHhhCCCCCCC
Confidence                                  012235567899999999999999999999999999876543

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=100.00  E-value=1.2e-37  Score=271.60  Aligned_cols=166  Identities=21%  Similarity=0.280  Sum_probs=137.4

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCc-CcccCcCCCcccchHHhhh-cCC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK-QFAEEIQTRQYRAPEVILR-AGY   80 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~-~~~~~~~~~~~~~PE~~~~-~~~   80 (237)
                      ++|.+++.+++|++.||.|+|+.+|+||||||+|||++.+|.+||+|||+|..... .....+||+.|+|||++.. ..|
T Consensus       289 l~E~~a~~y~~qIl~aL~yLH~~gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~~~~~~t~~GTp~YmAPEvl~~~~~y  368 (689)
T 3v5w_A          289 FSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAY  368 (689)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSCCCCSCCSCGGGCCHHHHSTTCCC
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHeEEeCCCCEEecccceeeecCCCCCCCccCCcCccCHHHHhCCCCC
Confidence            68999999999999999999999999999999999999999999999999976543 3446799999999999975 479


Q ss_pred             CchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCch
Q 026540           81 SFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSL  160 (237)
Q Consensus        81 ~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (237)
                      +.++|+||+||++|+|++|..||.+.+..    +  .....                                       
T Consensus       369 ~~~vDiWSLGvilYEmLtG~~PF~~~~~~----~--~~~i~---------------------------------------  403 (689)
T 3v5w_A          369 DSSADWFSLGCMLFKLLRGHSPFRQHKTK----D--KHEID---------------------------------------  403 (689)
T ss_dssp             CTHHHHHHHHHHHHHHHHSSCTTCGGGCC----C--HHHHH---------------------------------------
T ss_pred             CcHHHHHHHHHHHHHHHhCCCCCCCCChH----H--HHHHH---------------------------------------
Confidence            99999999999999999999999764311    1  11111                                       


Q ss_pred             hHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCC-----HHHHhcCCCcCcccCCcc
Q 026540          161 DRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPT-----AQQCLQHPWLSLRNSTRD  213 (237)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t-----~~ell~hp~f~~~~~~~~  213 (237)
                      ..........+..+++++.+||.+||+.||.+|++     ++|+++||||++.++...
T Consensus       404 ~~i~~~~~~~p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~HpfF~~idW~~l  461 (689)
T 3v5w_A          404 RMTLTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMV  461 (689)
T ss_dssp             HHHHHCCCCCCTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTTSGGGTTCCHHHH
T ss_pred             HhhcCCCCCCCccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhcCccccCCCHHHH
Confidence            11122233445667889999999999999999998     899999999998876543

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=100.00  E-value=1.8e-36  Score=256.15  Aligned_cols=206  Identities=30%  Similarity=0.409  Sum_probs=159.1

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCc--EEEeecCcceecCcCcccCcCCCcccchHHhhhcC
Q 026540            2 TIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMR--CKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAG   79 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~--~kl~dfg~~~~~~~~~~~~~~~~~~~~PE~~~~~~   79 (237)
                      ++++..+..++.|++.||.|+|..+++||||||+|||++.++.  +||+|||++...........+++.|+|||++.+..
T Consensus       196 ~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~~  275 (429)
T 3kvw_A          196 GFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTYIQSRFYRAPEVILGAR  275 (429)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHHTEECSCCSGGGEEESSTTSCCEEECCCTTCEETTCCCCSSCSCGGGCCHHHHHTBC
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEccCCCcceEEeecccceecCCcccccCCCCCccChHHHhCCC
Confidence            3678899999999999999999999999999999999999876  99999999987776666778999999999999999


Q ss_pred             CCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcccc---
Q 026540           80 YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLK---  156 (237)
Q Consensus        80 ~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---  156 (237)
                      ++.++|+||+||+++++++|..||.+.      ...+++..+.+.++.++..+.........++...+.........   
T Consensus       276 ~~~~~DiwSlG~il~elltG~~pf~~~------~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  349 (429)
T 3kvw_A          276 YGMPIDMWSLGCILAELLTGYPLLPGE------DEGDQLACMIELLGMPSQKLLDASKRAKNFVSSKGYPRYCTVTTLSD  349 (429)
T ss_dssp             CCTHHHHHHHHHHHHHHHHSSCSSCCS------SHHHHHHHHHHHHCCCCHHHHHTBTTHHHHBCTTSCBTTSCEECCCC
T ss_pred             CCchHHHHhHHHHHHHHHhCCCCCCCC------CHHHHHHHHHHHcCCCCHHHHHhhhhhhhccCCCCCccccccccccc
Confidence            999999999999999999999999876      47889999999999999998877766666654433211100000   


Q ss_pred             ----------------CCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccCCcccc
Q 026540          157 ----------------FWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNSTRDET  215 (237)
Q Consensus       157 ----------------~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~~~~~~  215 (237)
                                      ..+......  ..+....++.+.+||.+||++||++|||++|+|+||||+......+..
T Consensus       350 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~l~~~~~~~~~dli~~~L~~dP~~Rpta~e~L~Hpw~~~~~~~~~~~  422 (429)
T 3kvw_A          350 GSVVLNGGRSRRGKLRGPPESREWG--NALKGCDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWLRRRLPKPPTG  422 (429)
T ss_dssp             --CEECCEECTTCCEECSTTCSCHH--HHTTTCCCHHHHHHHHHHTCSSTTTSCCHHHHHTSTTTC---------
T ss_pred             ccccccccccchhhccCCccchhhH--hhccccchHHHHHHHHHHCCCChhhCCCHHHHhCChhhccCCCCCCcc
Confidence                            000000000  011223467899999999999999999999999999999776554433

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=100.00  E-value=2.3e-36  Score=257.74  Aligned_cols=195  Identities=24%  Similarity=0.350  Sum_probs=148.1

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCc--CcccCcCCCcccchHHhhhcCC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK--QFAEEIQTRQYRAPEVILRAGY   80 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~--~~~~~~~~~~~~~PE~~~~~~~   80 (237)
                      +++.++..++.|++.||.|+|+.+++||||||+|||++.++.+||+|||++.....  .....+||+.|+|||++.+..+
T Consensus       161 l~~~~~~~~~~qil~aL~~lH~~~iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~  240 (464)
T 3ttj_A          161 LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGY  240 (464)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCCC-----CCCC----CCCTTCCHHHHTTCCC
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCcccCCCChHhEEEeCCCCEEEEEEEeeeecCCCcccCCCcccccccCHHHHcCCCC
Confidence            67889999999999999999999999999999999999999999999999976543  2345688999999999999999


Q ss_pred             CchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchh-hhcccCccchhccccCCc
Q 026540           81 SFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKD-YFDRHGDLKRIRRLKFWS  159 (237)
Q Consensus        81 ~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~  159 (237)
                      +.++|+||+||++++|++|+.||.+.      ...+++..+.+.+|.+.+..+........ +........      ...
T Consensus       241 ~~~~DiwSlG~il~ell~g~~pF~g~------~~~~~~~~i~~~lg~p~~~~~~~~~~~~~~~~~~~~~~~------~~~  308 (464)
T 3ttj_A          241 KENVDIWSVGCIMGEMVRHKILFPGR------DYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYA------GLT  308 (464)
T ss_dssp             CTTHHHHHHHHHHHHHHHSSCSSCCS------SHHHHHHHHHHHHCSCCHHHHTTSCHHHHHHHTTSCCCC------CCC
T ss_pred             CHHHHHHHHHHHHHHHHhCCCCCCCC------CHHHHHHHHHHhcCCCCHHHHHHcchhhhhHhhcccccC------CCC
Confidence            99999999999999999999999876      48889999999999988877654432211 111111110      011


Q ss_pred             hhHHhhhhc-----CCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCccc
Q 026540          160 LDRLLVDKY-----RFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRN  209 (237)
Q Consensus       160 ~~~~~~~~~-----~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~  209 (237)
                      .........     ......+.++.+||.+||++||.+|||++|+|+||||+.+.
T Consensus       309 ~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~~~~~~  363 (464)
T 3ttj_A          309 FPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWY  363 (464)
T ss_dssp             HHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTGGGC
T ss_pred             hHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcChhhhhcc
Confidence            111111100     00122367899999999999999999999999999999664

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=100.00  E-value=9.6e-37  Score=265.55  Aligned_cols=166  Identities=22%  Similarity=0.281  Sum_probs=135.5

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCC--CcEEEeecCcceecCc--CcccCcCCCcccchHHhhh
Q 026540            2 TIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGID--MRCKVVDFGNACRANK--QFAEEIQTRQYRAPEVILR   77 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~--~~~kl~dfg~~~~~~~--~~~~~~~~~~~~~PE~~~~   77 (237)
                      .|+|.+++.+++|++.||.|||..+|+||||||+|||++.+  +.+||+|||++.....  .....+||+.|+|||++.+
T Consensus       251 ~l~e~~~~~~~~qi~~al~ylH~~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~~~~~~~GT~~y~APEv~~~  330 (573)
T 3uto_A          251 KMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEG  330 (573)
T ss_dssp             CEEHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTSEEEEECSSGGGCCHHHHTT
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhccccCCCCCCEEEeeccceeEccCCCceeeeEECccccCHHHhCC
Confidence            37899999999999999999999999999999999999864  7999999999976543  3345689999999999999


Q ss_pred             cCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccC
Q 026540           78 AGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKF  157 (237)
Q Consensus        78 ~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (237)
                      ..|+.++|+||+||++|+|++|..||.+.+      ....+..+.+....++..                          
T Consensus       331 ~~y~~~~DiWSlGvilyeml~G~~Pf~~~~------~~~~~~~i~~~~~~~~~~--------------------------  378 (573)
T 3uto_A          331 KPVGYYTDMWSVGVLSYILLSGLSPFGGEN------DDETLRNVKSCDWNMDDS--------------------------  378 (573)
T ss_dssp             CCBCHHHHHHHHHHHHHHHHHSCCSSCCSS------HHHHHHHHHTTCCCCCSG--------------------------
T ss_pred             CCCCcHHHHHHHHHHHHHHHHCCCCCCCcC------HHHHHHHHHhCCCCCCcc--------------------------
Confidence            999999999999999999999999998663      333433332211111100                          


Q ss_pred             CchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccCC
Q 026540          158 WSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNST  211 (237)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~~  211 (237)
                                  ....++.++.+||.+||+.||.+|||+.|+|+||||+..+..
T Consensus       379 ------------~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~Hpw~~~~~~~  420 (573)
T 3uto_A          379 ------------AFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNAP  420 (573)
T ss_dssp             ------------GGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSTTTSCCCCT
T ss_pred             ------------cccCCCHHHHHHHHHHccCChhHCcCHHHHhcCcCcCCCCCC
Confidence                        012346788999999999999999999999999999976553

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=100.00  E-value=3.1e-36  Score=242.85  Aligned_cols=157  Identities=20%  Similarity=0.258  Sum_probs=121.4

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecC-----cCcccCcCCCcccchHHhhh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRAN-----KQFAEEIQTRQYRAPEVILR   77 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~-----~~~~~~~~~~~~~~PE~~~~   77 (237)
                      +++.++..++.|++.||+|+|+.+|+||||||+|||++.++.+||+|||+|....     ......+||+.|+|||++.+
T Consensus       129 l~~~~~~~i~~qia~gL~yLH~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~GT~~ymAPE~l~~  208 (307)
T 3omv_A          129 FQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRM  208 (307)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCSSSEEEETTEEEEECCCSSCBC------------CCCCTTSCCHHHHHC
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCccCCccCHHHEEECCCCcEEEeeccCceecccCCcceeecccccCCCccCHHHhhc
Confidence            6788999999999999999999999999999999999999999999999996543     12345689999999999974


Q ss_pred             c---CCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcc
Q 026540           78 A---GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRR  154 (237)
Q Consensus        78 ~---~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (237)
                      .   .|+.++|||||||++|||++|+.||.+.+      +...+..+...-...|                         
T Consensus       209 ~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~------~~~~~~~~~~~~~~~p-------------------------  257 (307)
T 3omv_A          209 QDNNPFSFQSDVYSYGIVLYELMTGELPYSHIN------NRDQIIFMVGRGYASP-------------------------  257 (307)
T ss_dssp             CSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCC------CHHHHHHHHHTTCCCC-------------------------
T ss_pred             cCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCC------hHHHHHHHHhcCCCCC-------------------------
Confidence            3   58999999999999999999999997653      2222222211100000                         


Q ss_pred             ccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhc
Q 026540          155 LKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ  201 (237)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  201 (237)
                                 .....+..+++.+.+|+.+||+.||++|||++|+++
T Consensus       258 -----------~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~  293 (307)
T 3omv_A          258 -----------DLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILS  293 (307)
T ss_dssp             -----------CSTTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHH
T ss_pred             -----------CcccccccchHHHHHHHHHHcCCCHhHCcCHHHHHH
Confidence                       001123456788999999999999999999998754

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=2.5e-35  Score=246.12  Aligned_cols=206  Identities=22%  Similarity=0.287  Sum_probs=150.9

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCc------------------------
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK------------------------   58 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~------------------------   58 (237)
                      +++..+..++.|++.||.|+|+.+++||||||+|||++.++.+||+|||++.....                        
T Consensus       106 ~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (388)
T 3oz6_A          106 LEPVHKQYVVYQLIKVIKYLHSGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQP  185 (388)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEESSSCCCCCCCGGGCCC-----------
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHeEEcCCCCEEecCCcccccccccccccccccccccccccccccccc
Confidence            56788999999999999999999999999999999999999999999999865421                        


Q ss_pred             CcccCcCCCcccchHHhhh-cCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCC
Q 026540           59 QFAEEIQTRQYRAPEVILR-AGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGA  137 (237)
Q Consensus        59 ~~~~~~~~~~~~~PE~~~~-~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  137 (237)
                      .....+||+.|+|||++.+ ..++.++|+||+||+++++++|..||.+.      ....++..+...++.++........
T Consensus       186 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~------~~~~~~~~i~~~~~~p~~~~~~~~~  259 (388)
T 3oz6_A          186 ILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGS------STMNQLERIIGVIDFPSNEDVESIQ  259 (388)
T ss_dssp             ----CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCS------SHHHHHHHHHHHHCCCCHHHHHTSC
T ss_pred             cccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCC------CHHHHHHHHHHhcCCCCHHHHHhcc
Confidence            1234578999999999987 56899999999999999999999999876      4788999999999988877664433


Q ss_pred             Cch--hhhcccCccchhccccCC---chhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccCCc
Q 026540          138 QSK--DYFDRHGDLKRIRRLKFW---SLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNSTR  212 (237)
Q Consensus       138 ~~~--~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~~~  212 (237)
                      ...  .+................   +.-............++.++.+||.+||++||.+|||++|+|+||||+.+....
T Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~~R~t~~e~l~Hp~~~~~~~~~  339 (388)
T 3oz6_A          260 SPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNKRISANDALKHPFVSIFHNPN  339 (388)
T ss_dssp             CSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGGGSCCHHHHTTSTTTTTTCCGG
T ss_pred             CHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCcccCCCHHHHhCCHHHHHhcCCc
Confidence            221  111100000000000000   000000011112234567899999999999999999999999999999776544


Q ss_pred             cc
Q 026540          213 DE  214 (237)
Q Consensus       213 ~~  214 (237)
                      .+
T Consensus       340 ~~  341 (388)
T 3oz6_A          340 EE  341 (388)
T ss_dssp             GC
T ss_pred             cC
Confidence            43

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=100.00  E-value=8.1e-35  Score=242.61  Aligned_cols=201  Identities=24%  Similarity=0.421  Sum_probs=156.3

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhh--hcCCccCCCCCccccC--CCCcEEEeecCcceecCcCcccCcCCCcccchHHhhhc
Q 026540            3 IVEKKLKRRAKRAVANISIRRA--SMGGIELPKPERCLDG--IDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRA   78 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~--~~~~h~d~kp~Nili~--~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~PE~~~~~   78 (237)
                      +++..+..++.|++.||.|+|+  .+++||||||+|||++  .++.+||+|||++...........+++.|+|||++.+.
T Consensus       154 ~~~~~~~~i~~qi~~al~~lH~~~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~~  233 (382)
T 2vx3_A          154 VSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPEVLLGM  233 (382)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHTSTTTCEECCCCSGGGEEESSTTSCCEEECCCTTCEETTCCCCSSCSCGGGCCHHHHTTC
T ss_pred             CCHHHHHHHHHHHHHHHHHhccCCCCEEcCCCCcccEEEecCCCCcEEEEeccCceecccccccccCCccccChHHHcCC
Confidence            6788999999999999999994  6899999999999995  46789999999998877766677889999999999998


Q ss_pred             CCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCcc--c------
Q 026540           79 GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDL--K------  150 (237)
Q Consensus        79 ~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~------  150 (237)
                      .++.++|+||+||+++++++|..||.+.      .....+..+.+..+.++............++......  .      
T Consensus       234 ~~~~~~DiwSlG~il~elltg~~pf~~~------~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  307 (382)
T 2vx3_A          234 PYDLAIDMWSLGCILVEMHTGEPLFSGA------NEVDQMNKIVEVLGIPPAHILDQAPKARKFFEKLPDGTWNLKKTKD  307 (382)
T ss_dssp             CCCTHHHHHHHHHHHHHHHHSSCSSCCS------SHHHHHHHHHHHHCSCCHHHHTTCTTHHHHEEECTTSCEEECCCCT
T ss_pred             CCCcHHHHHHHHHHHHHHHhCCCCCCCC------CHHHHHHHHHHHhCCCCHHHHHhhHHHHHHHHhccccccccccccc
Confidence            9999999999999999999999999876      4778889999999999988877665555555433210  0      


Q ss_pred             ---hhccccCCchhHHhhh-----------hcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCccc
Q 026540          151 ---RIRRLKFWSLDRLLVD-----------KYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRN  209 (237)
Q Consensus       151 ---~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~  209 (237)
                         .........+......           ...........+.+||.+||++||++|||++|+|+||||+...
T Consensus       308 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~Rpta~e~L~hp~f~~~~  380 (382)
T 2vx3_A          308 GKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSFFKKTA  380 (382)
T ss_dssp             TCCCSCCTTCSCHHHHHTTTTTSGGGTTTTCTTCCHHHHHHHHHHHHHHTCSCTTTSCCHHHHTTSGGGCC--
T ss_pred             cccccCCcchhhHHHHhhccccCCCccccccccccchhhHHHHHHHHHhcCCChhhCCCHHHHhcCcccccCC
Confidence               0000001111111110           0111233456899999999999999999999999999998653

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=100.00  E-value=4.6e-36  Score=246.51  Aligned_cols=154  Identities=19%  Similarity=0.234  Sum_probs=126.0

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC-----cccCcCCCcccchHHhhh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ-----FAEEIQTRQYRAPEVILR   77 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~-----~~~~~~~~~~~~PE~~~~   77 (237)
                      |++.++..++.|++.||+|+|+.+++||||||+|||++.++.+||+|||+|+.....     .....||+.|+|||++.+
T Consensus       182 l~~~~~~~~~~qia~gl~yLH~~~iiHRDLK~~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~  261 (353)
T 4ase_A          182 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFD  261 (353)
T ss_dssp             BCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHhHhhCCeecCccCccceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhc
Confidence            678999999999999999999999999999999999999999999999999754322     223467899999999999


Q ss_pred             cCCCchhhhhhhhhHHHHHhc-CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcccc
Q 026540           78 AGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLK  156 (237)
Q Consensus        78 ~~~~~~~diws~g~~l~~~~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (237)
                      ..|+.++|||||||++|||++ |..||.+..     ........+.+.                                
T Consensus       262 ~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~-----~~~~~~~~i~~g--------------------------------  304 (353)
T 4ase_A          262 RVYTIQSDVWSFGVLLWEIFSLGASPYPGVK-----IDEEFCRRLKEG--------------------------------  304 (353)
T ss_dssp             CCCCHHHHHHHHHHHHHHHTTTSCCSSTTCC-----CSHHHHHHHHHT--------------------------------
T ss_pred             CCCCCcccEeehHHHHHHHHhCCCCCCCCCC-----HHHHHHHHHHcC--------------------------------
Confidence            999999999999999999998 899997653     111111111000                                


Q ss_pred             CCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcC
Q 026540          157 FWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQH  202 (237)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h  202 (237)
                               .....+..+++++.+++.+||+.||++|||++|+++|
T Consensus       305 ---------~~~~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~  341 (353)
T 4ase_A          305 ---------TRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH  341 (353)
T ss_dssp             ---------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ---------CCCCCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHH
Confidence                     0122345567889999999999999999999999987

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=100.00  E-value=1.2e-35  Score=242.12  Aligned_cols=153  Identities=16%  Similarity=0.195  Sum_probs=120.8

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCc-----CcccCcCCCcccchHHhhh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK-----QFAEEIQTRQYRAPEVILR   77 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~-----~~~~~~~~~~~~~PE~~~~   77 (237)
                      |++.++..++.|++.||+|+|+.+++||||||+|||++.++.+||+|||+++....     ......||+.|+|||++.+
T Consensus       155 l~~~~~~~i~~qia~gl~yLH~~~iiHRDLKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~  234 (329)
T 4aoj_A          155 LGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILY  234 (329)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTTEEEECCCC----------------CCCCGGGCCHHHHTT
T ss_pred             CCHHHHHHHHHHHHHHHHHHhcCCeecccccHhhEEECCCCcEEEcccccceeccCCCcceecCcccccccccChhhhcC
Confidence            67889999999999999999999999999999999999999999999999975432     1234578999999999999


Q ss_pred             cCCCchhhhhhhhhHHHHHhc-CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcccc
Q 026540           78 AGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLK  156 (237)
Q Consensus        78 ~~~~~~~diws~g~~l~~~~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (237)
                      ..++.++|||||||++||+++ |+.||...+      ..+.+..+.+.                                
T Consensus       235 ~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~------~~~~~~~i~~g--------------------------------  276 (329)
T 4aoj_A          235 RKFTTESDVWSFGVVLWEIFTYGKQPWYQLS------NTEAIDCITQG--------------------------------  276 (329)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHTTSCCTTCSSC------HHHHHHHHHHT--------------------------------
T ss_pred             CCCCccccccchHHHHHHHHcCCCCCCCCCC------HHHHHHHHHcC--------------------------------
Confidence            999999999999999999998 899997653      22222222110                                


Q ss_pred             CCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcC
Q 026540          157 FWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQH  202 (237)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h  202 (237)
                               .....+..+++++.+|+.+||+.||++|||++|++++
T Consensus       277 ---------~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~  313 (329)
T 4aoj_A          277 ---------RELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHAR  313 (329)
T ss_dssp             ---------CCCCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHH
T ss_pred             ---------CCCCCcccccHHHHHHHHHHcCcChhHCcCHHHHHHH
Confidence                     0112345567889999999999999999999999864

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=100.00  E-value=6.2e-36  Score=240.74  Aligned_cols=155  Identities=17%  Similarity=0.256  Sum_probs=126.1

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC-----cccCcCCCcccchHHhhh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ-----FAEEIQTRQYRAPEVILR   77 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~-----~~~~~~~~~~~~PE~~~~   77 (237)
                      |++.++..++.|+++||.|+|+.+++||||||+|||++.++.+||+|||+|+.....     .....||+.|+|||++.+
T Consensus       125 l~~~~~~~i~~qia~gl~yLH~~~iiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~  204 (299)
T 4asz_A          125 LTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMY  204 (299)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCcccCccCHhhEEECCCCcEEECCcccceecCCCCceeecCceecChhhcCHHHHcC
Confidence            688999999999999999999999999999999999999999999999999654321     123467899999999999


Q ss_pred             cCCCchhhhhhhhhHHHHHhc-CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcccc
Q 026540           78 AGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLK  156 (237)
Q Consensus        78 ~~~~~~~diws~g~~l~~~~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (237)
                      ..++.++||||+||++|||++ |+.||.+.+      ..+....+..  +.                             
T Consensus       205 ~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~------~~~~~~~i~~--~~-----------------------------  247 (299)
T 4asz_A          205 RKFTTESDVWSLGVVLWEIFTYGKQPWYQLS------NNEVIECITQ--GR-----------------------------  247 (299)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHTTTCCTTTTSC------HHHHHHHHHH--TC-----------------------------
T ss_pred             CCCCchhhHHHHHHHHHHHHcCCCCCCCCCC------HHHHHHHHHc--CC-----------------------------
Confidence            999999999999999999998 899997653      2222222211  00                             


Q ss_pred             CCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcC
Q 026540          157 FWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLS  206 (237)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~  206 (237)
                                ....+..+++++.+|+.+||+.||++|||++|++  +|+.
T Consensus       248 ----------~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~--~~L~  285 (299)
T 4asz_A          248 ----------VLQRPRTCPQEVYELMLGCWQREPHMRKNIKGIH--TLLQ  285 (299)
T ss_dssp             ----------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHH--HHHH
T ss_pred             ----------CCCCCccchHHHHHHHHHHcCCChhHCcCHHHHH--HHHH
Confidence                      1123455678899999999999999999999995  4554

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=100.00  E-value=1e-35  Score=240.50  Aligned_cols=153  Identities=13%  Similarity=0.197  Sum_probs=126.0

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCc-----CcccCcCCCcccchHHhhh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK-----QFAEEIQTRQYRAPEVILR   77 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~-----~~~~~~~~~~~~~PE~~~~   77 (237)
                      |++.++..++.|++.||+|+|+.+++||||||+|||++.++.+||+|||+++....     ......||+.|+|||++.+
T Consensus       142 l~~~~~~~i~~qia~gl~yLH~~~iiHRDLK~~NILl~~~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~  221 (308)
T 4gt4_A          142 LEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMY  221 (308)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCCCCCCccccceEECCCCCEEECCcccceeccCCCceeEecccccCCcccCHHHHhC
Confidence            67889999999999999999999999999999999999999999999999865432     2334578899999999999


Q ss_pred             cCCCchhhhhhhhhHHHHHhc-CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcccc
Q 026540           78 AGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLK  156 (237)
Q Consensus        78 ~~~~~~~diws~g~~l~~~~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (237)
                      ..++.++|||||||++||+++ |..||.+.+      ..+....+..  +                              
T Consensus       222 ~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~------~~~~~~~i~~--~------------------------------  263 (308)
T 4gt4_A          222 GKFSIDSDIWSYGVVLWEVFSYGLQPYCGYS------NQDVVEMIRN--R------------------------------  263 (308)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHTTTCCTTTTCC------HHHHHHHHHT--T------------------------------
T ss_pred             CCCCccchhhhHHHHHHHHHhCCCCCCCCCC------HHHHHHHHHc--C------------------------------
Confidence            999999999999999999998 889997653      2222222110  0                              


Q ss_pred             CCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcC
Q 026540          157 FWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQH  202 (237)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h  202 (237)
                               .....+..++..+.+|+.+||+.||++|||++|++++
T Consensus       264 ---------~~~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~  300 (308)
T 4gt4_A          264 ---------QVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSR  300 (308)
T ss_dssp             ---------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ---------CCCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence                     0112345567889999999999999999999999875

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=8.2e-35  Score=241.38  Aligned_cols=192  Identities=26%  Similarity=0.377  Sum_probs=154.1

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcCcccCcCCCcccchHHhhh-cCCC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILR-AGYS   81 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~PE~~~~-~~~~   81 (237)
                      +++.++..++.|++.||.|+|+.+++||||||+||+++.++.+||+|||++...........+++.|+|||++.+ ..++
T Consensus       125 l~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~  204 (367)
T 1cm8_A          125 LGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQADSEMTGYVVTRWYRAPEVILNWMRYT  204 (367)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCSSCCSSCSCGGGCCTHHHHTTTCCC
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCccccCcCHHHEEEcCCCCEEEEeeecccccccccCcCcCCCCcCCHHHHhCCCCCC
Confidence            678899999999999999999999999999999999999999999999999877666667788999999999987 5789


Q ss_pred             chhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCch--hhhcccCccchhccccCCc
Q 026540           82 FSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSK--DYFDRHGDLKRIRRLKFWS  159 (237)
Q Consensus        82 ~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~  159 (237)
                      .++|+||+||+++++++|+.||.+.      ....++..+.+..|.++..+........  .+......      .....
T Consensus       205 ~~~DiwslG~il~ell~g~~pf~~~------~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~  272 (367)
T 1cm8_A          205 QTVDIWSVGCIMAEMITGKTLFKGS------DHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPE------LEKKD  272 (367)
T ss_dssp             TTHHHHHHHHHHHHHHHSSCSSCCS------SHHHHHHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSCC------CCCCC
T ss_pred             hhhhHHHHHHHHHHHHhCCCCCCCC------CHHHHHHHHHHhcCCCCHHHHHHhhhHHHHHHHHhCCC------CCCCC
Confidence            9999999999999999999999876      4788899999999999888765433221  11111110      00001


Q ss_pred             hhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccCCcc
Q 026540          160 LDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNSTRD  213 (237)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~~~~  213 (237)
                      +.       ......++.+.+||.+||+.||.+|||++|+|+||||........
T Consensus       273 ~~-------~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~hp~f~~~~~~~~  319 (367)
T 1cm8_A          273 FA-------SILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLHDTED  319 (367)
T ss_dssp             GG-------GTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTC----
T ss_pred             HH-------HHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcChHHHhhcCCcc
Confidence            11       112345678999999999999999999999999999998765443

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=100.00  E-value=3.3e-35  Score=238.57  Aligned_cols=191  Identities=24%  Similarity=0.318  Sum_probs=146.7

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCc---CcccCcCCCcccchHHhhhc
Q 026540            2 TIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK---QFAEEIQTRQYRAPEVILRA   78 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~---~~~~~~~~~~~~~PE~~~~~   78 (237)
                      ++++.++..++.|++.||.|+|..+++||||||+||+++.++.+||+|||++.....   ......+++.|+|||++.+.
T Consensus       115 ~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~  194 (311)
T 3niz_A          115 GLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGS  194 (311)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEETTSCCC---CCCCCCTTCCHHHHTTC
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCchHhEEECCCCCEEEccCcCceecCCCcccccCCcccCCcCCHHHhcCC
Confidence            367899999999999999999999999999999999999999999999999976542   23445779999999999874


Q ss_pred             -CCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccC
Q 026540           79 -GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKF  157 (237)
Q Consensus        79 -~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (237)
                       .++.++|+||+|++++++++|..||.+..      ..+.+..+.+..+.+....+........+......     ....
T Consensus       195 ~~~~~~~DiwslG~il~~ll~g~~pf~~~~------~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~  263 (311)
T 3niz_A          195 KKYSTSVDIWSIGCIFAEMITGKPLFPGVT------DDDQLPKIFSILGTPNPREWPQVQELPLWKQRTFQ-----VFEK  263 (311)
T ss_dssp             CSCCTHHHHHHHHHHHHHHHHSSCSCCCSS------TTTHHHHHHHHHCCCCTTTSGGGTTSHHHHSCCCC-----CCCC
T ss_pred             CCCCchHHhHHHHHHHHHHHhCCCCCCCCC------hHHHHHHHHHHHCCCChHHhhhhhccchhhhcccc-----cccC
Confidence             58999999999999999999999998763      55677888888887665544333322222111100     0000


Q ss_pred             CchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccC
Q 026540          158 WSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNS  210 (237)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~  210 (237)
                      .+....       ....+.++.+||.+||++||.+|||++|+++||||+..+.
T Consensus       264 ~~~~~~-------~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~~  309 (311)
T 3niz_A          264 KPWSSI-------IPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKDLDP  309 (311)
T ss_dssp             CCHHHH-------STTCCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTSCT
T ss_pred             CcHHHh-------CcccCHHHHHHHHHHcCCChhHCCCHHHHhcCcccccCCc
Confidence            111111       2234678899999999999999999999999999997653

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=100.00  E-value=7.6e-35  Score=235.88  Aligned_cols=186  Identities=25%  Similarity=0.320  Sum_probs=145.5

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecC--cCcccCcCCCcccchHHhhhcCC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRAN--KQFAEEIQTRQYRAPEVILRAGY   80 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~--~~~~~~~~~~~~~~PE~~~~~~~   80 (237)
                      +++.++..++.|++.||.|+|..+++||||||+||+++.++.+||+|||++....  .......+++.|+|||++.+..+
T Consensus       117 ~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~  196 (308)
T 3g33_A          117 LPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALTPVVVTLWYRAPEVLLQSTY  196 (308)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCTTTEEECTTSCEEECSCSCTTTSTTCCCSGGGGCCCSSCCHHHHHTSCC
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCEEEeeCccccccCCCcccCCccccccccCchHHcCCCC
Confidence            7899999999999999999999999999999999999999999999999986543  23345578999999999999999


Q ss_pred             CchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCch
Q 026540           81 SFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSL  160 (237)
Q Consensus        81 ~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (237)
                      +.++|+||+|++++++++|..||.+.      .....+..+.+..+.++...+..........        .......+.
T Consensus       197 ~~~~DiwslG~il~~l~~g~~pf~~~------~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~  262 (308)
T 3g33_A          197 ATPVDMWSVGCIFAEMFRRKPLFCGN------SEADQLGKIFDLIGLPPEDDWPRDVSLPRGA--------FPPRGPRPV  262 (308)
T ss_dssp             CSTHHHHHHHHHHHHTTTSSCSCCCS------SHHHHHHHHHHHHCCCCTTTSCSSCSSCGGG--------SCCCCCCCH
T ss_pred             CchHHHHHHHHHHHHHHhCCCCCCCC------CHHHHHHHHHHHhCCCChhhccchhhccccc--------cCCCCCCcH
Confidence            99999999999999999999999876      4778888888888877765443322211100        000001111


Q ss_pred             hHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCccc
Q 026540          161 DRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRN  209 (237)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~  209 (237)
                      ...       ....+..+.+||.+||+.||.+|||+.|+|+||||....
T Consensus       263 ~~~-------~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h~~~~~~~  304 (308)
T 3g33_A          263 QSV-------VPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHKDE  304 (308)
T ss_dssp             HHH-------SCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSTTC----
T ss_pred             HHh-------CccccHHHHHHHHHHhcCCCccCCCHHHHhcCccccCCC
Confidence            111       223467889999999999999999999999999999654

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=100.00  E-value=8.4e-35  Score=247.90  Aligned_cols=201  Identities=25%  Similarity=0.361  Sum_probs=146.4

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCc------------------------
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK------------------------   58 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~------------------------   58 (237)
                      +++.++..++.|++.||.|+|+.+++||||||+|||++.++.+||+|||++.....                        
T Consensus       153 l~~~~~~~~~~qi~~aL~~LH~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (458)
T 3rp9_A          153 LTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPH  232 (458)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEECCCTTCBCTTSCTTCCCCCC---------------
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCcCCCCCChhhEEECCCCCEeecccccchhccCccccccccccCccccccccccccc
Confidence            68899999999999999999999999999999999999999999999999865431                        


Q ss_pred             ------CcccCcCCCcccchHHhh-hcCCCchhhhhhhhhHHHHHhc-----------CCcccCCCCCCCC---------
Q 026540           59 ------QFAEEIQTRQYRAPEVIL-RAGYSFSVDMWSFACTAFELAT-----------GDMLFAPKSGQGF---------  111 (237)
Q Consensus        59 ------~~~~~~~~~~~~~PE~~~-~~~~~~~~diws~g~~l~~~~~-----------g~~~f~~~~~~~~---------  111 (237)
                            .....+||+.|+|||++. +..++.++|+||+||++++|++           |..+|.+......         
T Consensus       233 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~~~~~~~~~~~~p~f~g~~~~~~~~~~~~~~~  312 (458)
T 3rp9_A          233 TKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVAYHADRGPLFPGSSCFPLSPDQKAGND  312 (458)
T ss_dssp             ------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTSTTTCSSGGGCCCSCC----------------
T ss_pred             cccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhccccccccccccccCCCCcccccccccccccc
Confidence                  123457799999999875 4569999999999999999998           5666654421100         


Q ss_pred             -----CChHHHHHHHHHHHCCCCHHHHhcCCCchh--hhcccCccchhccccCCchhHHhhhhcCCCHHhHHHHHHHHHh
Q 026540          112 -----CEDEDHLALMMELIGKMPRKIAIGGAQSKD--YFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVP  184 (237)
Q Consensus       112 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  184 (237)
                           ....+++..+..++|.++...+........  +.......      ....+..       .....+..+.+||.+
T Consensus       313 ~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~-------~~~~~s~~~~dLl~~  379 (458)
T 3rp9_A          313 FKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKR------EGTDLAE-------RFPASSADAIHLLKR  379 (458)
T ss_dssp             ----CHHHHHHHHHHHHHHCCCCHHHHHTSSCHHHHHHHTTSCCC------CCCCGGG-------GSTTSCHHHHHHHHH
T ss_pred             ccccccCCHHHHHHHHHHcCCCCHHHHhhcCCHHHHHHHHhcCCC------CCCCHHH-------HCCCCCHHHHHHHHH
Confidence                 113688889999999998877654333211  11110000      0000110       112346788999999


Q ss_pred             ccccCCCCCCCHHHHhcCCCcCcccCCccccc
Q 026540          185 LLDFTPEKRPTAQQCLQHPWLSLRNSTRDETK  216 (237)
Q Consensus       185 ~L~~dP~~R~t~~ell~hp~f~~~~~~~~~~~  216 (237)
                      ||++||.+|||++|+|+||||+.......++.
T Consensus       380 mL~~dP~~R~t~~e~L~Hp~f~~~~~~~~e~~  411 (458)
T 3rp9_A          380 MLVFNPNKRITINECLAHPFFKEVRIAEVETN  411 (458)
T ss_dssp             HSCSSTTTSCCHHHHHHSGGGTTTCCGGGCCC
T ss_pred             HhccCccccCCHHHHhcCHhhhhcCCCccCCC
Confidence            99999999999999999999999876655443

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=100.00  E-value=1.6e-34  Score=238.83  Aligned_cols=197  Identities=30%  Similarity=0.453  Sum_probs=149.5

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCC-------------------------CCcEEEeecCcceecC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGI-------------------------DMRCKVVDFGNACRAN   57 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~-------------------------~~~~kl~dfg~~~~~~   57 (237)
                      +++.++..++.|++.||.|+|..+++||||||+|||++.                         ++.+||+|||++....
T Consensus       134 ~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~  213 (360)
T 3llt_A          134 FHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKS  213 (360)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCTTCCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETT
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCcccEEEccccccccccchhcccccccccccccCCCCEEEEeccCceecC
Confidence            678899999999999999999999999999999999975                         7889999999998776


Q ss_pred             cCcccCcCCCcccchHHhhhcCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCC
Q 026540           58 KQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGA  137 (237)
Q Consensus        58 ~~~~~~~~~~~~~~PE~~~~~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  137 (237)
                      .......|++.|+|||++.+..++.++|+||+||+++++++|..||...      ...+.+..+....+.++........
T Consensus       214 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~------~~~~~~~~~~~~~~~~p~~~~~~~~  287 (360)
T 3llt_A          214 DYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTH------EHMEHLAMMESIIQPIPKNMLYEAT  287 (360)
T ss_dssp             SCCCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCCCS------SHHHHHHHHHHHTCCCCHHHHHHHT
T ss_pred             CCCcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCCCC------cHHHHHHHHHHhcCCCCHHHHhhhh
Confidence            6666778899999999999999999999999999999999999999876      4778888888999988887764332


Q ss_pred             Cch--hhhcccCccchhccccCCchhHHhhhhcCC---CHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcC
Q 026540          138 QSK--DYFDRHGDLKRIRRLKFWSLDRLLVDKYRF---SETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLS  206 (237)
Q Consensus       138 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~  206 (237)
                      ...  .++.... ......................   ....++.+.+||.+||+.||++|||++|+|+||||+
T Consensus       288 ~~~~~~~~~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpta~elL~hp~f~  360 (360)
T 3llt_A          288 KTNGSKYVNKDE-LKLAWPENASSINSIKHVKKCLPLYKIIKHELFCDFLYSILQIDPTLRPSPAELLKHKFLE  360 (360)
T ss_dssp             TSGGGGGEETTT-TEECTTTTCSCHHHHHHHHTCCCHHHHCCCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGC
T ss_pred             hccCccccCccc-ceecCcccccchhhhhhhhhcccccccchHHHHHHHHHHHhcCChhhCCCHHHHhcCcccC
Confidence            221  1111111 0000000000000000000001   111236788999999999999999999999999995

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=100.00  E-value=6.9e-35  Score=239.99  Aligned_cols=203  Identities=22%  Similarity=0.350  Sum_probs=156.7

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCcccc-------------------CCCCcEEEeecCcceecCcCcccC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLD-------------------GIDMRCKVVDFGNACRANKQFAEE   63 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili-------------------~~~~~~kl~dfg~~~~~~~~~~~~   63 (237)
                      +++.++..++.|++.||.|+|..+++||||||+|||+                   +.++.+||+|||++..........
T Consensus       120 ~~~~~~~~i~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~  199 (355)
T 2eu9_A          120 YPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHEHHTTI  199 (355)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEESCCCEEEEECCC-CCCEEEESCCCEEECCCTTCEETTSCCCSS
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecccccccccccccccccccCCCcEEEeecCccccccccccCC
Confidence            6788999999999999999999999999999999999                   557889999999998766666677


Q ss_pred             cCCCcccchHHhhhcCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhh
Q 026540           64 IQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYF  143 (237)
Q Consensus        64 ~~~~~~~~PE~~~~~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  143 (237)
                      .+++.|+|||++.+..++.++|+||+|++++++++|..||...      .....+..+....+.+|..+.........++
T Consensus       200 ~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~------~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~  273 (355)
T 2eu9_A          200 VATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTH------ENREHLVMMEKILGPIPSHMIHRTRKQKYFY  273 (355)
T ss_dssp             CSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCS------SHHHHHHHHHHHHCCCCHHHHHHCSCGGGEE
T ss_pred             cCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCC------CHHHHHHHHHHHcCCCcHHHhhhccchhhhc
Confidence            8899999999999889999999999999999999999999866      4677888889999999988876554433322


Q ss_pred             cccCccchhccccCC--chhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccCC
Q 026540          144 DRHGDLKRIRRLKFW--SLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNST  211 (237)
Q Consensus       144 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~~  211 (237)
                      .....+.........  ................+..+.+||.+||+.||.+|||++|+++||||.+....
T Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~~  343 (355)
T 2eu9_A          274 KGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALLHPFFAGLTPE  343 (355)
T ss_dssp             TTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTSGGGGGCCHH
T ss_pred             ccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcCHHHHhcChhhcCCChh
Confidence            211111110000000  00000001112234457789999999999999999999999999999987543

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=100.00  E-value=1e-34  Score=233.41  Aligned_cols=189  Identities=23%  Similarity=0.288  Sum_probs=145.5

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCc---CcccCcCCCcccchHHhhhcC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK---QFAEEIQTRQYRAPEVILRAG   79 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~---~~~~~~~~~~~~~PE~~~~~~   79 (237)
                      +++.++..++.|++.||.|+|+.+++||||||+||+++.++.+||+|||++.....   ......+++.|+|||++.+..
T Consensus        98 l~~~~~~~~~~ql~~~l~~lH~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~  177 (292)
T 3o0g_A           98 LDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAK  177 (292)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCSCCSCCCSCCSCGGGCCHHHHTTCS
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccceecCCccccccCCccccCCcChHHHcCCC
Confidence            67889999999999999999999999999999999999999999999999976542   234457789999999998776


Q ss_pred             -CCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCC
Q 026540           80 -YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFW  158 (237)
Q Consensus        80 -~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (237)
                       ++.++|+||+|++++++++|..||....     .....+..+.+..+.++...+........+..          ....
T Consensus       178 ~~~~~~DiwslG~il~~l~~~~~p~~~~~-----~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~----------~~~~  242 (292)
T 3o0g_A          178 LYSTSIDMWSAGCIFAELANAGRPLFPGN-----DVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKP----------YPMY  242 (292)
T ss_dssp             CCCTHHHHHHHHHHHHHHTTTSCCSCCCS-----SHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCC----------CCCC
T ss_pred             CcCchHHHHHHHHHHHHHHHcCCCCcCCC-----CHHHHHHHHHHHhCCCChhhhhhhcccccccc----------cccc
Confidence             7999999999999999999888765443     56778888888888776654432222111100          0000


Q ss_pred             chhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCccc
Q 026540          159 SLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRN  209 (237)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~  209 (237)
                      +.   ...........+..+.+||.+||+.||++|||++|+++||||+...
T Consensus       243 ~~---~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~  290 (292)
T 3o0g_A          243 PA---TTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDFC  290 (292)
T ss_dssp             CT---TCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTC-
T ss_pred             cC---CcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcCcccccCC
Confidence            00   0001112334577889999999999999999999999999999754

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=100.00  E-value=1.6e-34  Score=239.59  Aligned_cols=193  Identities=23%  Similarity=0.354  Sum_probs=143.5

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcCcccCcCCCcccchHHhhh-cCCC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILR-AGYS   81 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~PE~~~~-~~~~   81 (237)
                      +++.++..++.|++.||.|+|+.+++||||||+||+++.++.+||+|||++...........+++.|+|||++.+ ..++
T Consensus       129 l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~  208 (367)
T 2fst_X          129 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATRWYRAPEIMLNWMHYN  208 (367)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECC---------------CCCTTCCHHHHTTCCSCC
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHhhEEECCCCCEEEeeccccccccccCCCcCcCcCccChHHHcCCcCCC
Confidence            678899999999999999999999999999999999999999999999999776655566788999999999987 5689


Q ss_pred             chhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCch--hhhcccCccchhccccCCc
Q 026540           82 FSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSK--DYFDRHGDLKRIRRLKFWS  159 (237)
Q Consensus        82 ~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~  159 (237)
                      .++|+||+||+++++++|..||.+.      ....++..+.+..|.++...........  .+.....      ......
T Consensus       209 ~~~DiwslG~il~ell~g~~pf~~~------~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~------~~~~~~  276 (367)
T 2fst_X          209 QTVDIWSVGCIMAELLTGRTLFPGT------DHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLT------QMPKMN  276 (367)
T ss_dssp             TTHHHHHHHHHHHHHHHSSCSCCCS------SHHHHHHHHHHHHCSCCHHHHTTCCCHHHHHHHHTSC------CCCCCC
T ss_pred             chhhHHHHHHHHHHHHhCCCCCCCC------CHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHHhccC------CCCCCC
Confidence            9999999999999999999999876      4788999999999998887765433211  1111000      001111


Q ss_pred             hhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccCCccc
Q 026540          160 LDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNSTRDE  214 (237)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~~~~~  214 (237)
                      ....       ....++.+.+||.+||++||.+|||++|+|+||||........+
T Consensus       277 ~~~~-------~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~hp~~~~~~~~~~~  324 (367)
T 2fst_X          277 FANV-------FIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE  324 (367)
T ss_dssp             HHHH-------TTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTTCCGGGC
T ss_pred             HHHH-------CCCCCHHHHHHHHHhCCCCcccCcCHHHHhcChhhhhccCCCCC
Confidence            1111       12346788999999999999999999999999999987654443

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=100.00  E-value=1.9e-34  Score=235.86  Aligned_cols=202  Identities=24%  Similarity=0.417  Sum_probs=155.9

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCC-------------------CCcEEEeecCcceecCcCcccC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGI-------------------DMRCKVVDFGNACRANKQFAEE   63 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~-------------------~~~~kl~dfg~~~~~~~~~~~~   63 (237)
                      +++.++..++.|++.||+|+|..+++||||||+||+++.                   ++.++|+|||++..........
T Consensus       115 ~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~  194 (339)
T 1z57_A          115 FRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDEHHSTL  194 (339)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCCCEEEEEC----CEEEEESCCCEEECCCSSCEETTSCCCSS
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeccccccccCCccccccccccCCCceEeeCcccccCccccccc
Confidence            678899999999999999999999999999999999987                   5679999999998766666667


Q ss_pred             cCCCcccchHHhhhcCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhh
Q 026540           64 IQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYF  143 (237)
Q Consensus        64 ~~~~~~~~PE~~~~~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  143 (237)
                      .+++.|+|||++.+..++.++|+||+|++++++++|..||...      ........+.+..+.+|..+.........+.
T Consensus       195 ~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~------~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~  268 (339)
T 1z57_A          195 VSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTH------DSKEHLAMMERILGPLPKHMIQKTRKRKYFH  268 (339)
T ss_dssp             CSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCS------CHHHHHHHHHHHHCSCCHHHHHHCSCGGGEE
T ss_pred             cCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCC------ChHHHHHHHHHHhCCCCHHHHhhccchhHHh
Confidence            8899999999999889999999999999999999999999766      4677888889999999988776554332221


Q ss_pred             cccCccchhccccCC--chhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccC
Q 026540          144 DRHGDLKRIRRLKFW--SLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNS  210 (237)
Q Consensus       144 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~  210 (237)
                      .....+.........  ................+..+.+||.+||+.||.+|||++|+++||||+....
T Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~~  337 (339)
T 1z57_A          269 HDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALKHPFFDLLKK  337 (339)
T ss_dssp             TTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTSGGGGGGGC
T ss_pred             hccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCHHHHhcCHHHHHHhc
Confidence            111111110000000  0000011112234556789999999999999999999999999999987653

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=100.00  E-value=1.4e-34  Score=232.34  Aligned_cols=188  Identities=23%  Similarity=0.300  Sum_probs=140.3

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCc---CcccCcCCCcccchHHhhhc
Q 026540            2 TIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK---QFAEEIQTRQYRAPEVILRA   78 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~---~~~~~~~~~~~~~PE~~~~~   78 (237)
                      ++++.++..++.|++.||.|+|..+++||||||+||+++.++.+||+|||++.....   ......+++.|+|||++.+.
T Consensus        96 ~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~  175 (288)
T 1ob3_A           96 GLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGS  175 (288)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC---------CCCTTCCHHHHTTC
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEEeECccccccCccccccccccccccccCchheeCC
Confidence            367889999999999999999999999999999999999999999999999865432   23345779999999999865


Q ss_pred             -CCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccC
Q 026540           79 -GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKF  157 (237)
Q Consensus        79 -~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (237)
                       .++.++|+||+|++++++++|..||.+.      ...+.+..+.+..+.++...+........+-.....      ...
T Consensus       176 ~~~~~~~DiwslG~il~~l~~g~~pf~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~  243 (288)
T 1ob3_A          176 KKYSTTIDIWSVGCIFAEMVNGTPLFPGV------SEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTV------YEP  243 (288)
T ss_dssp             CSCCTHHHHHHHHHHHHHHHHSSCSCCCS------SHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCC------CCC
T ss_pred             CCCCcHHHHHHHHHHHHHHHhCCCCCCCC------CHHHHHHHHHHHHCCCChhhchhhhccccccccccc------ccC
Confidence             4899999999999999999999999766      467777888888777654433221111111000000      000


Q ss_pred             CchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcc
Q 026540          158 WSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLR  208 (237)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~  208 (237)
                      .+.       .......+..+.+||.+||+.||++|||++|+++||||+..
T Consensus       244 ~~~-------~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~  287 (288)
T 1ob3_A          244 LPW-------ESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKEN  287 (288)
T ss_dssp             CCG-------GGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGGC-
T ss_pred             ccH-------HHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcCcchhhc
Confidence            000       11223456788999999999999999999999999999864

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=100.00  E-value=2.2e-34  Score=234.28  Aligned_cols=198  Identities=25%  Similarity=0.359  Sum_probs=149.8

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCc---CcccCcCCCcccchHHhhhc-
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK---QFAEEIQTRQYRAPEVILRA-   78 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~---~~~~~~~~~~~~~PE~~~~~-   78 (237)
                      +++..+..++.|++.||.|+|..+++||||||+||+++.++.+||+|||++.....   ......+++.|+|||++.+. 
T Consensus       105 ~~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~  184 (317)
T 2pmi_A          105 LELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMGSR  184 (317)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCSSCEETTSCCCCCCCCCSCCTTCCHHHHTTCC
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCeeeCCCChHHeEEcCCCCEEECcCccceecCCCcccCCCCcccccccCchHhhCCC
Confidence            67889999999999999999999999999999999999999999999999976542   23345779999999999875 


Q ss_pred             CCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCC
Q 026540           79 GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFW  158 (237)
Q Consensus        79 ~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (237)
                      .++.++|+||+|++++++++|..||.+.      .....+..+.+..+.++...+........+....      ......
T Consensus       185 ~~~~~~DiwslG~il~el~~g~~pf~~~------~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~  252 (317)
T 2pmi_A          185 TYSTSIDIWSCGCILAEMITGKPLFPGT------NDEEQLKLIFDIMGTPNESLWPSVTKLPKYNPNI------QQRPPR  252 (317)
T ss_dssp             CCCTHHHHHHHHHHHHHHHHSSCSCCCS------SHHHHHHHHHHHHCSCCTTTCGGGGGCTTCCTTC------CCCCCC
T ss_pred             CCCcHHHHHHHHHHHHHHHhCCCCCCCC------ChHHHHHHHHHHhCCCChhHhhhhhhhhhccccc------ccccch
Confidence            5899999999999999999999999876      4677888888888887765544322221111100      000011


Q ss_pred             chhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccCCccc
Q 026540          159 SLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNSTRDE  214 (237)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~~~~~  214 (237)
                      .+.....  .......+..+.+||.+||+.||.+|||++|+++||||+.......+
T Consensus       253 ~~~~~~~--~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~~~~~  306 (317)
T 2pmi_A          253 DLRQVLQ--PHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWFAEYYHHASM  306 (317)
T ss_dssp             CSHHHHG--GGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGGCC----
T ss_pred             hHHHhhc--ccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCChhhhcccchhhc
Confidence            1111111  11223456789999999999999999999999999999987655443

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=100.00  E-value=7.4e-34  Score=240.41  Aligned_cols=200  Identities=27%  Similarity=0.334  Sum_probs=147.0

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC-----------------------
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ-----------------------   59 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~-----------------------   59 (237)
                      +++.++..++.|++.||.|+|+.+++||||||+|||++.++.+||+|||++......                       
T Consensus       126 l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  205 (432)
T 3n9x_A          126 LTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLK  205 (432)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEEC--------------------------
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHeEECCCCCEEEccCCCcccccccccccccccccccccccccccchh
Confidence            688999999999999999999999999999999999999999999999999754321                       


Q ss_pred             --cccCcCCCcccchHHhh-hcCCCchhhhhhhhhHHHHHhcCCccc-----------CCCCCCCC-----------CCh
Q 026540           60 --FAEEIQTRQYRAPEVIL-RAGYSFSVDMWSFACTAFELATGDMLF-----------APKSGQGF-----------CED  114 (237)
Q Consensus        60 --~~~~~~~~~~~~PE~~~-~~~~~~~~diws~g~~l~~~~~g~~~f-----------~~~~~~~~-----------~~~  114 (237)
                        ....+||+.|+|||++. ...++.++|+||+||++++|++|..||           .+....+.           ...
T Consensus       206 ~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~  285 (432)
T 3n9x_A          206 KQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFPLFPGSSCFPLSPDRNSKKVHEKSN  285 (432)
T ss_dssp             -----CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTCSSGGGCCCSCCCSCSCC----------CHHHH
T ss_pred             ccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccccccccccccCCCccccccCcccccccccccch
Confidence              24568899999999975 456899999999999999999854433           33211000           014


Q ss_pred             HHHHHHHHHHHCCCCHHHHhcCCCchh--hhcccCccchhccccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCC
Q 026540          115 EDHLALMMELIGKMPRKIAIGGAQSKD--YFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEK  192 (237)
Q Consensus       115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~  192 (237)
                      .+++..+...+|.++............  +.....      .....+....       ....++++.+||.+||++||.+
T Consensus       286 ~~ql~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~-------~~~~s~~~~dLl~~mL~~dP~~  352 (432)
T 3n9x_A          286 RDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFP------HRKPINLKQK-------YPSISDDGINLLESMLKFNPNK  352 (432)
T ss_dssp             HHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSC------CCCCCCHHHH-------STTSCHHHHHHHHHHSCSSTTT
T ss_pred             HHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCC------CCCCCCHHHH-------CCCCCHHHHHHHHHHhcCCccc
Confidence            788899999999998876654332211  110000      0000011111       1235778999999999999999


Q ss_pred             CCCHHHHhcCCCcCcccCCcccc
Q 026540          193 RPTAQQCLQHPWLSLRNSTRDET  215 (237)
Q Consensus       193 R~t~~ell~hp~f~~~~~~~~~~  215 (237)
                      |||++|+|+||||+.......++
T Consensus       353 R~ta~e~L~Hp~f~~~~~~~~e~  375 (432)
T 3n9x_A          353 RITIDQALDHPYLKDVRKKKLEN  375 (432)
T ss_dssp             SCCHHHHHTCGGGTTTCCTTTC-
T ss_pred             CCCHHHHhcChhhhhccCcccCc
Confidence            99999999999999987766654

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=100.00  E-value=1.8e-34  Score=235.40  Aligned_cols=193  Identities=22%  Similarity=0.338  Sum_probs=146.0

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCc---CcccCcCCCcccchHHhhh-c
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK---QFAEEIQTRQYRAPEVILR-A   78 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~---~~~~~~~~~~~~~PE~~~~-~   78 (237)
                      +++.++..++.|++.||.|+|..+++||||||+||+++.++.+||+|||++.....   ......+++.|+|||++.+ .
T Consensus        97 ~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~  176 (324)
T 3mtl_A           97 INMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVVTLWYRPPDILLGST  176 (324)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTEEESSCCGGGEEECTTCCEEECSSSEEECC------------CGGGCCHHHHTTCC
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCccCCCcCHHHEEECCCCCEEEccCcccccccCCccccccccCcccccChhhhcCCC
Confidence            67889999999999999999999999999999999999999999999999865432   2334577899999999987 4


Q ss_pred             CCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCC
Q 026540           79 GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFW  158 (237)
Q Consensus        79 ~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (237)
                      .++.++|+||+|++++++++|..||.+.      .....+..+.+..+.++...+........+.....        ...
T Consensus       177 ~~~~~~DiwslG~il~~l~~g~~pf~~~------~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~  242 (324)
T 3mtl_A          177 DYSTQIDMWGVGCIFYEMATGRPLFPGS------TVEEQLHFIFRILGTPTEETWPGILSNEEFKTYNY--------PKY  242 (324)
T ss_dssp             CCCTHHHHHHHHHHHHHHHHSSCSCCCS------SHHHHHHHHHHHHCCCCTTTSTTGGGCHHHHHTCC--------CCC
T ss_pred             CCCcHHHHHHHHHHHHHHHhCCCCCCCC------CHHHHHHHHHHHhCCCChHhchhhhcchhhccccc--------ccc
Confidence            6899999999999999999999999876      47788889999998877665543322222111000        000


Q ss_pred             chhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccCCcc
Q 026540          159 SLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNSTRD  213 (237)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~~~~  213 (237)
                      ......    ......+..+.+||.+||++||.+|||++|+|+||||........
T Consensus       243 ~~~~~~----~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~~~~  293 (324)
T 3mtl_A          243 RAEALL----SHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFLSLGERIH  293 (324)
T ss_dssp             CCCCHH----HHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGGCSTTS
T ss_pred             cchhhh----hhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcChhhhhcccccc
Confidence            000000    012234678899999999999999999999999999998866444

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=100.00  E-value=3.8e-34  Score=239.48  Aligned_cols=191  Identities=24%  Similarity=0.372  Sum_probs=150.5

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccC-CCCcEEEeecCcceecC--cCcccCcCCCcccchHHhhhc-
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDG-IDMRCKVVDFGNACRAN--KQFAEEIQTRQYRAPEVILRA-   78 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~-~~~~~kl~dfg~~~~~~--~~~~~~~~~~~~~~PE~~~~~-   78 (237)
                      +++..+..++.|++.||.|+|..+++||||||+|||++ .++.+||+|||++....  .......+++.|+|||++.+. 
T Consensus       138 ~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~  217 (394)
T 4e7w_A          138 MPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSYICSRYYRAPELIFGAT  217 (394)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEECCTTCCCCSSCSCGGGCCHHHHTTCS
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEcCCCCcEEEeeCCCcccccCCCCCcccccCcCccCHHHHcCCC
Confidence            56788999999999999999999999999999999998 78999999999997643  334456789999999999876 


Q ss_pred             CCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCC
Q 026540           79 GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFW  158 (237)
Q Consensus        79 ~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (237)
                      .++.++|+||+||+++++++|..||.+.      ...+++..+.+.+|.++..........  +.. .    ........
T Consensus       218 ~~~~~~DiwSlG~il~ell~g~~pf~~~------~~~~~l~~i~~~~g~p~~~~~~~~~~~--~~~-~----~~~~~~~~  284 (394)
T 4e7w_A          218 NYTTNIDIWSTGCVMAELMQGQPLFPGE------SGIDQLVEIIKVLGTPSREQIKTMNPN--YME-H----KFPQIRPH  284 (394)
T ss_dssp             SCCTHHHHHHHHHHHHHHHHSSCSSCCS------SHHHHHHHHHHHHCCCCHHHHHHHCGG--GSS-S----CCCCCCCC
T ss_pred             CCCcHHHHHHHHHHHHHHHhCCCCCCCC------CHHHHHHHHHHHhCCCCHHHHHhhChh--hhh-h----ccccccCC
Confidence            4899999999999999999999999876      478889999999999887765322111  000 0    00001111


Q ss_pred             chhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccCCc
Q 026540          159 SLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNSTR  212 (237)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~~~  212 (237)
                      +....      ++...++++.+||.+||++||.+|||+.|+++||||+......
T Consensus       285 ~~~~~------~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~~~  332 (394)
T 4e7w_A          285 PFSKV------FRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFDELRTGE  332 (394)
T ss_dssp             CHHHH------SCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGSTTTSSC
T ss_pred             cHHHh------ccccCCHHHHHHHHHHhCCChhhCCCHHHHhcChhhhhhcccc
Confidence            11111      2334567899999999999999999999999999999875543

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=100.00  E-value=4.4e-34  Score=239.92  Aligned_cols=206  Identities=22%  Similarity=0.247  Sum_probs=143.7

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCcccc----CCCCcEEEeecCcceecCc------CcccCcCCCcccch
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLD----GIDMRCKVVDFGNACRANK------QFAEEIQTRQYRAP   72 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili----~~~~~~kl~dfg~~~~~~~------~~~~~~~~~~~~~P   72 (237)
                      +++..+..++.|++.||.|+|..+++||||||+|||+    +.++.+||+|||++.....      ......|++.|+||
T Consensus       125 l~~~~~~~i~~qi~~al~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aP  204 (405)
T 3rgf_A          125 LPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAP  204 (405)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECCSSTTTTCEEECCTTCCC----------------CCCTTCCH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCEeCCCcCHHHeEEecCCCCCCcEEEEECCCceecCCCCcccccCCCceecCcccCc
Confidence            7888999999999999999999999999999999999    6778999999999965442      23345789999999


Q ss_pred             HHhhhc-CCCchhhhhhhhhHHHHHhcCCcccCCCCCC---CCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCc
Q 026540           73 EVILRA-GYSFSVDMWSFACTAFELATGDMLFAPKSGQ---GFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGD  148 (237)
Q Consensus        73 E~~~~~-~~~~~~diws~g~~l~~~~~g~~~f~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (237)
                      |++.+. .++.++|+||+||+++++++|..||.+....   ......+++..+...+|.++...+...............
T Consensus       205 E~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~  284 (405)
T 3rgf_A          205 ELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKD  284 (405)
T ss_dssp             HHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHHHHHHHHHHCCCCTTTCGGGGGSTTHHHHHHH
T ss_pred             hhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHHHHHHHHhhCCCChhhcchhhcCcchhhhhhh
Confidence            999875 4899999999999999999999999765422   112346888999999988776544322211111100000


Q ss_pred             cchhccccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccCCc
Q 026540          149 LKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNSTR  212 (237)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~~~  212 (237)
                      ... .............   ......+..+.+||.+||++||.+|||++|+|+||||.......
T Consensus       285 ~~~-~~~~~~~~~~~~~---~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~hp~f~~~~~~~  344 (405)
T 3rgf_A          285 FRR-NTYTNCSLIKYME---KHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYFLEDPLPT  344 (405)
T ss_dssp             CCG-GGGTTCCHHHHHH---TTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTSSSCCC
T ss_pred             ccc-cCCCcchhhhhHh---hcCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChhhccCCCCc
Confidence            000 0000001111110   11122356788999999999999999999999999999765443

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=100.00  E-value=3.3e-34  Score=234.33  Aligned_cols=160  Identities=23%  Similarity=0.338  Sum_probs=132.5

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecC--cCcccCcCCCcccchHHhhhcCC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRAN--KQFAEEIQTRQYRAPEVILRAGY   80 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~--~~~~~~~~~~~~~~PE~~~~~~~   80 (237)
                      +++.++..++.|++.||.|+|..+++||||||+||+++.++.+||+|||++....  .......|++.|+|||++.+..+
T Consensus       111 l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~  190 (328)
T 3fe3_A          111 MKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFCGAPPYAAPELFQGKKY  190 (328)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSCGGGTTSSSGGGCCHHHHHTCCC
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCEeccCCCHHHEEEcCCCCEEEeeccCceecCCCCccccccCCcceeCcccccCCCc
Confidence            6788999999999999999999999999999999999999999999999986543  33445678999999999998876


Q ss_pred             C-chhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCc
Q 026540           81 S-FSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWS  159 (237)
Q Consensus        81 ~-~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (237)
                      . .++|+||+|++++++++|..||.+..      .......+                                      
T Consensus       191 ~~~~~DiwslG~il~ell~g~~pf~~~~------~~~~~~~i--------------------------------------  226 (328)
T 3fe3_A          191 DGPEVDVWSLGVILYTLVSGSLPFDGQN------LKELRERV--------------------------------------  226 (328)
T ss_dssp             CSHHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHH--------------------------------------
T ss_pred             CCchhhhhhhHHHHHHHHhCCCCCCCCC------HHHHHHHH--------------------------------------
Confidence            4 78999999999999999999997652      21211111                                      


Q ss_pred             hhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccC
Q 026540          160 LDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNS  210 (237)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~  210 (237)
                          .......+...+.++.+|+.+||+.||.+|||++|+++||||.....
T Consensus       227 ----~~~~~~~p~~~s~~~~~li~~~L~~dP~~R~t~~eil~h~~~~~~~~  273 (328)
T 3fe3_A          227 ----LRGKYRIPFYMSTDCENLLKRFLVLNPIKRGTLEQIMKDRWINAGHE  273 (328)
T ss_dssp             ----HHCCCCCCTTSCHHHHHHHHHHCCSSTTTSCCHHHHTTCTTTTTTCT
T ss_pred             ----HhCCCCCCCCCCHHHHHHHHHHCCCChhHCcCHHHHhcCHhhcCCCc
Confidence                11222334455788999999999999999999999999999986543

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=100.00  E-value=2.4e-34  Score=240.30  Aligned_cols=168  Identities=20%  Similarity=0.250  Sum_probs=135.4

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceec---CcCcccCcCCCcccchHHhhhcC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRA---NKQFAEEIQTRQYRAPEVILRAG   79 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~---~~~~~~~~~~~~~~~PE~~~~~~   79 (237)
                      +++.+++.++.|++.||.|+|..+++||||||+|||++.++.+||+|||++...   .......+||+.|+|||++.+..
T Consensus       150 l~~~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~  229 (396)
T 4dc2_A          150 LPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGED  229 (396)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTCCBCCCCBCGGGCCHHHHTTCC
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEECCCCCEEEeecceeeecccCCCccccccCCcccCCchhhcCCC
Confidence            678999999999999999999999999999999999999999999999998642   23345668899999999999999


Q ss_pred             CCchhhhhhhhhHHHHHhcCCcccCCCCCCCCC--ChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccC
Q 026540           80 YSFSVDMWSFACTAFELATGDMLFAPKSGQGFC--EDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKF  157 (237)
Q Consensus        80 ~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (237)
                      ++.++|+||+|+++++|++|..||.........  .....+                                       
T Consensus       230 ~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~---------------------------------------  270 (396)
T 4dc2_A          230 YGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYL---------------------------------------  270 (396)
T ss_dssp             BCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHH---------------------------------------
T ss_pred             CChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHH---------------------------------------
Confidence            999999999999999999999999754211000  000000                                       


Q ss_pred             CchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCH------HHHhcCCCcCcccCC
Q 026540          158 WSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTA------QQCLQHPWLSLRNST  211 (237)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~------~ell~hp~f~~~~~~  211 (237)
                        ...+......++..++.++.+||.+||+.||.+|+++      +|+++||||+..++.
T Consensus       271 --~~~i~~~~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~Hpff~~i~w~  328 (396)
T 4dc2_A          271 --FQVILEKQIRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWD  328 (396)
T ss_dssp             --HHHHHHCCCCCCTTSCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHHSTTTTTCCHH
T ss_pred             --HHHHhccccCCCCcCCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhcCccccCCCHH
Confidence              1112222334566678899999999999999999984      899999999987654

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=100.00  E-value=2.1e-33  Score=233.24  Aligned_cols=192  Identities=25%  Similarity=0.357  Sum_probs=148.1

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcCcccCcCCCcccchHHhhh-cCCC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILR-AGYS   81 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~PE~~~~-~~~~   81 (237)
                      +++.++..++.|++.||.|+|..+++||||||+||+++.++.+||+|||++...........+++.|+|||++.+ ..++
T Consensus       141 ~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~  220 (371)
T 4exu_A          141 FSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTRWYRAPEVILSWMHYN  220 (371)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECSTTCC--------CTTCCCTTSCHHHHSCCSCCC
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCCcCCCcCHHHeEECCCCCEEEEecCcccccccCcCCcccCccccCHHHhcCCCCCC
Confidence            678999999999999999999999999999999999999999999999999876666666788999999999987 5789


Q ss_pred             chhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchh--hhcccCccchhccccCCc
Q 026540           82 FSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKD--YFDRHGDLKRIRRLKFWS  159 (237)
Q Consensus        82 ~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~  159 (237)
                      .++|+||+|++++++++|..||.+.      ...+.+..+.+..+.++..+.........  +....      .......
T Consensus       221 ~~~DiwslG~il~el~~g~~pf~~~------~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~  288 (371)
T 4exu_A          221 QTVDIWSVGCIMAEMLTGKTLFKGK------DYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSL------PQTPRKD  288 (371)
T ss_dssp             TTHHHHHHHHHHHHHHHSSCSCCCS------SHHHHHHHHHHHHCCCCHHHHTTCSCHHHHHHHHHS------CCCCCCC
T ss_pred             cHHhHHHHHHHHHHHHhCCCCCCCC------ChHHHHHHHHHHhCCCcHHHHHHhhhhhhhhhhhcc------CCCcchh
Confidence            9999999999999999999999876      47788888899998888776644332111  10000      0000000


Q ss_pred             hhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccCCcc
Q 026540          160 LDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNSTRD  213 (237)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~~~~  213 (237)
                      ...       .....+..+.+||.+||+.||.+|||++|+|+||||........
T Consensus       289 ~~~-------~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~~~~~  335 (371)
T 4exu_A          289 FTQ-------LFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPFRDPEE  335 (371)
T ss_dssp             HHH-------HSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTTCCGGG
T ss_pred             HHH-------hccccChHHHHHHHHHCCCChhhcCCHHHHhcCcccccCCCccc
Confidence            111       12234678999999999999999999999999999997754433

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=100.00  E-value=7.7e-35  Score=240.25  Aligned_cols=161  Identities=19%  Similarity=0.266  Sum_probs=131.4

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecC---cCcccCcCCCcccchHHhhhcC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRAN---KQFAEEIQTRQYRAPEVILRAG   79 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~---~~~~~~~~~~~~~~PE~~~~~~   79 (237)
                      +++.+++.++.|++.||.|+|..+++||||||+|||++.++.+||+|||++....   ......+||+.|+|||++.+..
T Consensus       121 ~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NILl~~~g~ikL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~  200 (353)
T 3txo_A          121 FDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFCGTPDYIAPEILQEML  200 (353)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC---------CCGGGCCHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCCcccCCCHHHEEECCCCCEEEccccceeecccCCccccccCCCcCeEChhhcCCCC
Confidence            6789999999999999999999999999999999999999999999999986432   2334567899999999999888


Q ss_pred             CCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCc
Q 026540           80 YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWS  159 (237)
Q Consensus        80 ~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (237)
                      ++.++|+||+|+++++|++|..||.+.+      .......+.                                     
T Consensus       201 ~~~~~DiwslG~il~ell~G~~Pf~~~~------~~~~~~~i~-------------------------------------  237 (353)
T 3txo_A          201 YGPAVDWWAMGVLLYEMLCGHAPFEAEN------EDDLFEAIL-------------------------------------  237 (353)
T ss_dssp             CTTHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHH-------------------------------------
T ss_pred             cCCccCCCcchHHHHHHHhCCCCCCCCC------HHHHHHHHH-------------------------------------
Confidence            9999999999999999999999997653      323332221                                     


Q ss_pred             hhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCH------HHHhcCCCcCcccCC
Q 026540          160 LDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTA------QQCLQHPWLSLRNST  211 (237)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~------~ell~hp~f~~~~~~  211 (237)
                           ......+...+..+.+||.+||+.||.+||++      +|+++||||+..++.
T Consensus       238 -----~~~~~~p~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~hp~f~~~~w~  290 (353)
T 3txo_A          238 -----NDEVVYPTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILRHPFFKEIDWA  290 (353)
T ss_dssp             -----HCCCCCCTTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHTSGGGTTCCHH
T ss_pred             -----cCCCCCCCCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhhCCcccCCCHH
Confidence                 11223344457789999999999999999998      899999999987654

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=100.00  E-value=6.1e-34  Score=232.78  Aligned_cols=191  Identities=27%  Similarity=0.356  Sum_probs=141.7

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCcccc-----CCCCcEEEeecCcceecC---cCcccCcCCCcccchHH
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLD-----GIDMRCKVVDFGNACRAN---KQFAEEIQTRQYRAPEV   74 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili-----~~~~~~kl~dfg~~~~~~---~~~~~~~~~~~~~~PE~   74 (237)
                      +++.++..++.|++.||.|+|..+++||||||+|||+     +..+.+||+|||++....   .......+++.|+|||+
T Consensus       129 ~~~~~~~~i~~ql~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~  208 (329)
T 3gbz_A          129 VSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEIITLWYRPPEI  208 (329)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEC-----CCEEEECCTTHHHHHC-----------CCTTCCHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCEECCCCCHHHEEEecCCCCccceEEECcCCCccccCCcccccCCCcCCccccCHHH
Confidence            6788999999999999999999999999999999999     445569999999986543   22344567899999999


Q ss_pred             hhhcC-CCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhc
Q 026540           75 ILRAG-YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIR  153 (237)
Q Consensus        75 ~~~~~-~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (237)
                      +.+.. ++.++|+||+|++++++++|..||.+.      ...+.+..+.+..+.++...+........+......     
T Consensus       209 ~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----  277 (329)
T 3gbz_A          209 LLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGD------SEIDQLFKIFEVLGLPDDTTWPGVTALPDWKQSFPK-----  277 (329)
T ss_dssp             HTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCS------SHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCC-----
T ss_pred             hcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCC------CHHHHHHHHHHHhCCCchhhhhhhhhhhhhhhhhhh-----
Confidence            98754 899999999999999999999999876      477788888888887766544332222211111110     


Q ss_pred             cccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccCC
Q 026540          154 RLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNST  211 (237)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~~  211 (237)
                       .....+....      ....+.++.+||.+||+.||.+|||++|+|+||||+..++.
T Consensus       278 -~~~~~~~~~~------~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~~  328 (329)
T 3gbz_A          278 -FRGKTLKRVL------GALLDDEGLDLLTAMLEMDPVKRISAKNALEHPYFSHNDFD  328 (329)
T ss_dssp             -CCCCCHHHHH------GGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSSCSC
T ss_pred             -hccccHhhhc------ccccCHHHHHHHHHHccCChhhCCCHHHHhCCcccCCCCCC
Confidence             0111112111      22346788999999999999999999999999999987754

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=100.00  E-value=2.1e-33  Score=231.88  Aligned_cols=196  Identities=24%  Similarity=0.307  Sum_probs=151.8

Q ss_pred             hhHHHHHHHHHHHHhhhhhhh--hhcCCccCCCCCccccCC-CCcEEEeecCcceecCc--CcccCcCCCcccchHHhhh
Q 026540            3 IVEKKLKRRAKRAVANISIRR--ASMGGIELPKPERCLDGI-DMRCKVVDFGNACRANK--QFAEEIQTRQYRAPEVILR   77 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~--~~~~~h~d~kp~Nili~~-~~~~kl~dfg~~~~~~~--~~~~~~~~~~~~~PE~~~~   77 (237)
                      +++..+..++.|++.||.|+|  ..+++||||||+|||++. ++.+||+|||++.....  ......+++.|+|||++.+
T Consensus       126 ~~~~~~~~~~~qi~~al~~lH~~~~~ivH~Dlkp~NIll~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~  205 (360)
T 3e3p_A          126 PPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAYICSRYYRAPELIFG  205 (360)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHTSTTTCCBCSCCCGGGEEEETTTTEEEECCCTTCBCCCTTSCCCSTTSCGGGCCHHHHTT
T ss_pred             CCHHHHHHHHHHHHHHHHHHhCCCCCeecCcCCHHHEEEeCCCCcEEEeeCCCceecCCCCCcccccCCcceeCHHHHcC
Confidence            567788999999999999999  999999999999999986 89999999999975542  2334577999999999977


Q ss_pred             cC-CCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcccc
Q 026540           78 AG-YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLK  156 (237)
Q Consensus        78 ~~-~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (237)
                      .. ++.++|+||+|++++++++|..||.+.      .....+..+.+..+.++.................       ...
T Consensus       206 ~~~~~~~~Di~slG~il~ell~g~~pf~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~  272 (360)
T 3e3p_A          206 NQHYTTAVDIWSVGCIFAEMMLGEPIFRGD------NSAGQLHEIVRVLGCPSREVLRKLNPSHTDVDLY-------NSK  272 (360)
T ss_dssp             CSSCCTHHHHHHHHHHHHHHHHSSCSSCCS------SHHHHHHHHHHHHCCCCHHHHHHHCTTCCCGGGG-------CCC
T ss_pred             CCCCCcHHHHHHHHHHHHHHHhCCCCcCCC------ChHHHHHHHHHHcCCCCHHHHHhcccchhhcccc-------ccc
Confidence            65 899999999999999999999999876      4778888999999988887764322211111100       000


Q ss_pred             CCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccCCccc
Q 026540          157 FWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNSTRDE  214 (237)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~~~~~  214 (237)
                      ..+.....   .......+.++.+||.+||+.||.+|||+.|+|+||||+........
T Consensus       273 ~~~~~~~~---~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~~~~~  327 (360)
T 3e3p_A          273 GIPWSNVF---SDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFDELHDPATK  327 (360)
T ss_dssp             CCCHHHHT---TTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTSGGGGGGGCTTCC
T ss_pred             cCCccccc---chhhccccHHHHHHHHHHhccCccccCCHHHHhcCccccccCCcccc
Confidence            11111111   11233457889999999999999999999999999999988655443

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=100.00  E-value=1.6e-34  Score=239.99  Aligned_cols=195  Identities=24%  Similarity=0.357  Sum_probs=139.4

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC--cccCcCCCcccchHHhhhcCC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ--FAEEIQTRQYRAPEVILRAGY   80 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~--~~~~~~~~~~~~PE~~~~~~~   80 (237)
                      +++.++..++.|++.||.|+|..+++||||||+||+++.++.+||+|||++......  .....+++.|+|||++.+..+
T Consensus       124 ~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~  203 (371)
T 2xrw_A          124 LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGY  203 (371)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCCCC----------------CTTCCHHHHTTCCC
T ss_pred             cCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCCCEEEEEeecccccccccccCCceecCCccCHHHhcCCCC
Confidence            578899999999999999999999999999999999999999999999998765432  334578999999999999889


Q ss_pred             CchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhh-cccCccchhccccCCc
Q 026540           81 SFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYF-DRHGDLKRIRRLKFWS  159 (237)
Q Consensus        81 ~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  159 (237)
                      +.++|+||+|++++++++|..||.+.      .....+..+.+..+.+.+.+..........+ ......      ....
T Consensus       204 ~~~~DiwslG~il~el~~g~~pf~~~------~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~  271 (371)
T 2xrw_A          204 KENVDIWSVGCIMGEMIKGGVLFPGT------DHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKY------AGYS  271 (371)
T ss_dssp             CTTHHHHHHHHHHHHHHHSSCSSCCS------SHHHHHHHHHC-CCCCCHHHHTTSCHHHHHHHHSSCCC------CCCC
T ss_pred             CchHhHHHHHHHHHHHHhCCCCCCCC------CHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHhhCccc------cccc
Confidence            99999999999999999999999876      4667777787777777766654332211111 111100      0001


Q ss_pred             hhHHhhhhc-----CCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCccc
Q 026540          160 LDRLLVDKY-----RFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRN  209 (237)
Q Consensus       160 ~~~~~~~~~-----~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~  209 (237)
                      .........     ......+..+.+||.+||+.||.+|||++|+|+||||+.+.
T Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~~  326 (371)
T 2xrw_A          272 FEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVWY  326 (371)
T ss_dssp             HHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHHTTC
T ss_pred             hhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCCcchhhhc
Confidence            111111000     00123467899999999999999999999999999998653

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=100.00  E-value=3.5e-34  Score=233.22  Aligned_cols=161  Identities=21%  Similarity=0.235  Sum_probs=136.3

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcCcccCcCCCcccchHHhhhcCCCc
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSF   82 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~   82 (237)
                      +++..+..++.|++.||.|+|..+++||||||+||+++.++.+||+|||++...........|++.|+|||++.+..++.
T Consensus       103 ~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  182 (318)
T 1fot_A          103 FPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYTLCGTPDYIAPEVVSTKPYNK  182 (318)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTSCEEECCCSSCEECSSCBCCCCSCTTTCCHHHHTTCCBCT
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCccccCCChheEEEcCCCCEEEeecCcceecCCccccccCCccccCHhHhcCCCCCc
Confidence            57889999999999999999999999999999999999999999999999987666556678999999999999888999


Q ss_pred             hhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCchhH
Q 026540           83 SVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDR  162 (237)
Q Consensus        83 ~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (237)
                      ++|+||+|+++++|++|..||.+.+      .......+.                                        
T Consensus       183 ~~DiwslG~il~ell~g~~pf~~~~------~~~~~~~i~----------------------------------------  216 (318)
T 1fot_A          183 SIDWWSFGILIYEMLAGYTPFYDSN------TMKTYEKIL----------------------------------------  216 (318)
T ss_dssp             THHHHHHHHHHHHHHHSSCTTCCSS------HHHHHHHHH----------------------------------------
T ss_pred             ccchhhhHHHHHHHHhCCCCCCCCC------HHHHHHHHH----------------------------------------
Confidence            9999999999999999999997652      222222221                                        


Q ss_pred             HhhhhcCCCHHhHHHHHHHHHhccccCCCCCC-----CHHHHhcCCCcCcccCC
Q 026540          163 LLVDKYRFSETDAREFAEFLVPLLDFTPEKRP-----TAQQCLQHPWLSLRNST  211 (237)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~-----t~~ell~hp~f~~~~~~  211 (237)
                        .....++...+.++.+||.+||+.||++|+     +++++++||||+..++.
T Consensus       217 --~~~~~~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~hp~f~~~~~~  268 (318)
T 1fot_A          217 --NAELRFPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKEVVWE  268 (318)
T ss_dssp             --HCCCCCCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTSGGGSSCCHH
T ss_pred             --hCCCCCCCCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhcCccccCCCHH
Confidence              112223445578899999999999999999     89999999999976543

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=100.00  E-value=1.7e-33  Score=237.45  Aligned_cols=189  Identities=23%  Similarity=0.306  Sum_probs=147.3

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCC-CcEEEeecCcceecC--cCcccCcCCCcccchHHhhhc-
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGID-MRCKVVDFGNACRAN--KQFAEEIQTRQYRAPEVILRA-   78 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~-~~~kl~dfg~~~~~~--~~~~~~~~~~~~~~PE~~~~~-   78 (237)
                      +++..+..++.|++.||.|+|..+++||||||+|||++.+ +.+||+|||++....  .......+++.|+|||++.+. 
T Consensus       153 l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~  232 (420)
T 1j1b_A          153 LPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGAT  232 (420)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEEETTTTEEEECCCTTCEECCTTCCCCSCCSCTTSCCHHHHTTCS
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCccccCCChhhEEEeCCCCeEEeccchhhhhcccCCCceeeeeCCCcCCHHHHcCCC
Confidence            5677899999999999999999999999999999999965 678999999997543  233456789999999999875 


Q ss_pred             CCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCC
Q 026540           79 GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFW  158 (237)
Q Consensus        79 ~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (237)
                      .++.++|+||+||++++|++|+.||.+.      ...+++..+.+.+|.+....+.......   ...    ........
T Consensus       233 ~~~~~~DiwSlG~il~ell~G~~pf~~~------~~~~~l~~i~~~lg~p~~~~~~~~~~~~---~~~----~~p~~~~~  299 (420)
T 1j1b_A          233 DYTSSIDVWSAGCVLAELLLGQPIFPGD------SGVDQLVEIIKVLGTPTREQIREMNPNY---TEF----KFPQIKAH  299 (420)
T ss_dssp             SCCTHHHHHHHHHHHHHHHHSSCSSCCS------SHHHHHHHHHHHHCSCCHHHHHHHCSCC---CCC----CCCCCCCC
T ss_pred             CCCchhhhHHHHHHHHHHHhCCCCCCCC------CHHHHHHHHHHHhCCCCHHHHHhhChhh---hhh----ccCccCCC
Confidence            6899999999999999999999999876      4778889999999988776553221110   000    00001111


Q ss_pred             chhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccC
Q 026540          159 SLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNS  210 (237)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~  210 (237)
                      ++...      ++...+.++.+||.+||++||.+|||+.|+++||||.....
T Consensus       300 ~~~~~------~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~hp~f~~~~~  345 (420)
T 1j1b_A          300 PWTKV------FRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRD  345 (420)
T ss_dssp             CHHHH------SCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGGGGC
T ss_pred             CHHHh------cCCCCCHHHHHHHHHhccCChhHCCCHHHHhCCHhhccccc
Confidence            11111      22345678999999999999999999999999999987654

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=100.00  E-value=4.5e-34  Score=234.26  Aligned_cols=161  Identities=23%  Similarity=0.319  Sum_probs=133.9

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecC---cCcccCcCCCcccchHHhhhcC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRAN---KQFAEEIQTRQYRAPEVILRAG   79 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~---~~~~~~~~~~~~~~PE~~~~~~   79 (237)
                      +++.++..++.|++.||.|+|..+++||||||+|||++.++.+||+|||++....   .......||+.|+|||++.+..
T Consensus       102 ~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~  181 (337)
T 1o6l_A          102 FTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDND  181 (337)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTCCBCCCEECGGGCCGGGGSSSC
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCeecCcCCHHHEEECCCCCEEEeeccchhhcccCCCcccccccChhhCChhhhcCCC
Confidence            5788999999999999999999999999999999999999999999999986432   2344567899999999998888


Q ss_pred             CCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCc
Q 026540           80 YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWS  159 (237)
Q Consensus        80 ~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (237)
                      ++.++|+||+|+++++|++|..||.+..      .......+                                      
T Consensus       182 ~~~~~DiwslG~il~ell~g~~Pf~~~~------~~~~~~~i--------------------------------------  217 (337)
T 1o6l_A          182 YGRAVDWWGLGVVMYEMMCGRLPFYNQD------HERLFELI--------------------------------------  217 (337)
T ss_dssp             BCTTHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHH--------------------------------------
T ss_pred             CCchhhcccchhHHHHHhcCCCCCCCCC------HHHHHHHH--------------------------------------
Confidence            9999999999999999999999997642      22222211                                      


Q ss_pred             hhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCC-----CHHHHhcCCCcCcccCC
Q 026540          160 LDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRP-----TAQQCLQHPWLSLRNST  211 (237)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~-----t~~ell~hp~f~~~~~~  211 (237)
                          ......++...+.++.+||.+||+.||.+||     +++|+++||||...++.
T Consensus       218 ----~~~~~~~p~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h~~f~~~~~~  270 (337)
T 1o6l_A          218 ----LMEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQ  270 (337)
T ss_dssp             ----HHCCCCCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTTCCHH
T ss_pred             ----HcCCCCCCCCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcCCCcCCCCHH
Confidence                1112233445678899999999999999999     99999999999977543

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=100.00  E-value=7.1e-34  Score=234.25  Aligned_cols=160  Identities=24%  Similarity=0.272  Sum_probs=136.3

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcCcccCcCCCcccchHHhhhcCCCc
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSF   82 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~   82 (237)
                      +++.++..++.|++.||.|+|..+++||||||+|||++.++.+||+|||++...........|++.|+|||++.+..++.
T Consensus       138 ~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  217 (350)
T 1rdq_E          138 FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPEALAPEIILSKGYNK  217 (350)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSCBCCCEECGGGCCHHHHTTCCBCT
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCcccccCccceEEECCCCCEEEcccccceeccCCcccccCCccccCHHHhcCCCCCC
Confidence            67889999999999999999999999999999999999999999999999987766656678899999999999888999


Q ss_pred             hhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCchhH
Q 026540           83 SVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDR  162 (237)
Q Consensus        83 ~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (237)
                      ++|+||+|+++++|++|..||.+.+      .......+.                                        
T Consensus       218 ~~DiwslG~il~ell~g~~Pf~~~~------~~~~~~~i~----------------------------------------  251 (350)
T 1rdq_E          218 AVDWWALGVLIYEMAAGYPPFFADQ------PIQIYEKIV----------------------------------------  251 (350)
T ss_dssp             HHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHH----------------------------------------
T ss_pred             cCCEecccHhHhHHhhCCCCCCCCC------HHHHHHHHH----------------------------------------
Confidence            9999999999999999999997652      222222221                                        


Q ss_pred             HhhhhcCCCHHhHHHHHHHHHhccccCCCCCCC-----HHHHhcCCCcCcccC
Q 026540          163 LLVDKYRFSETDAREFAEFLVPLLDFTPEKRPT-----AQQCLQHPWLSLRNS  210 (237)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t-----~~ell~hp~f~~~~~  210 (237)
                        .....++...+..+.+||.+||+.||.+||+     ++++++||||...++
T Consensus       252 --~~~~~~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h~~f~~~~w  302 (350)
T 1rdq_E          252 --SGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW  302 (350)
T ss_dssp             --HCCCCCCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTSGGGTTCCH
T ss_pred             --cCCCCCCCCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHhCcCcCCCCH
Confidence              1122234455788999999999999999998     999999999997654

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=100.00  E-value=2.4e-33  Score=231.93  Aligned_cols=164  Identities=21%  Similarity=0.319  Sum_probs=132.8

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCC----cEEEeecCcceecCc--CcccCcCCCcccchHHhh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDM----RCKVVDFGNACRANK--QFAEEIQTRQYRAPEVIL   76 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~----~~kl~dfg~~~~~~~--~~~~~~~~~~~~~PE~~~   76 (237)
                      +++.++..++.|++.||.|+|..+++||||||+||+++.++    .+||+|||++.....  ......|++.|+|||++.
T Consensus       112 l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~~~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~  191 (361)
T 2yab_A          112 LSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVN  191 (361)
T ss_dssp             CBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCSSCEECCTTCCCCCCCSCGGGCCHHHHT
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEeCCCCCccCEEEEecCCceEcCCCCccccCCCCccEECchHHc
Confidence            68899999999999999999999999999999999998776    799999999976543  334567899999999999


Q ss_pred             hcCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcccc
Q 026540           77 RAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLK  156 (237)
Q Consensus        77 ~~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (237)
                      +..++.++|+||+|++++++++|..||.+.+      ....+..+......++...                        
T Consensus       192 ~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~------~~~~~~~i~~~~~~~~~~~------------------------  241 (361)
T 2yab_A          192 YEPLGLEADMWSIGVITYILLSGASPFLGDT------KQETLANITAVSYDFDEEF------------------------  241 (361)
T ss_dssp             TCCCCTHHHHHHHHHHHHHHHHSCCSSCCSS------HHHHHHHHHTTCCCCCHHH------------------------
T ss_pred             CCCCCccccHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHhcCCCCCchh------------------------
Confidence            8889999999999999999999999997653      3333333222111111110                        


Q ss_pred             CCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccC
Q 026540          157 FWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNS  210 (237)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~  210 (237)
                                    ....+..+.+||.+||+.||.+|||++|+++||||...+.
T Consensus       242 --------------~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~  281 (361)
T 2yab_A          242 --------------FSQTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPVDT  281 (361)
T ss_dssp             --------------HTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTSCSSH
T ss_pred             --------------ccCCCHHHHHHHHHHCCCChhHCcCHHHHhcCcCcCCCch
Confidence                          1123577899999999999999999999999999997654

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=100.00  E-value=2.2e-33  Score=226.42  Aligned_cols=163  Identities=23%  Similarity=0.335  Sum_probs=132.8

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCc---CcccCcCCCcccchHHhhhcC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK---QFAEEIQTRQYRAPEVILRAG   79 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~---~~~~~~~~~~~~~PE~~~~~~   79 (237)
                      +++.++..++.|++.||.|+|..+++||||||+||+++.++.+||+|||++.....   ......|++.|+|||++.+..
T Consensus       113 ~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~  192 (297)
T 3fxz_A          113 MDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKA  192 (297)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCCBCCCCSCGGGCCHHHHHCSC
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEECCCCCEEEeeCCCceecCCcccccCCccCCcCccChhhhcCCC
Confidence            67889999999999999999999999999999999999999999999999865442   233457899999999999999


Q ss_pred             CCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCc
Q 026540           80 YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWS  159 (237)
Q Consensus        80 ~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (237)
                      ++.++|+||+|++++++++|..||....      .......+.... .                                
T Consensus       193 ~~~~~DiwslG~il~ell~g~~pf~~~~------~~~~~~~~~~~~-~--------------------------------  233 (297)
T 3fxz_A          193 YGPKVDIWSLGIMAIEMIEGEPPYLNEN------PLRALYLIATNG-T--------------------------------  233 (297)
T ss_dssp             BCTHHHHHHHHHHHHHHHHSSCTTTTSC------HHHHHHHHHHHC-S--------------------------------
T ss_pred             CCcHHHHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHhCC-C--------------------------------
Confidence            9999999999999999999999997652      222222221110 0                                


Q ss_pred             hhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccC
Q 026540          160 LDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNS  210 (237)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~  210 (237)
                            .....+...+..+.+||.+||+.||.+|||++|+++||||+....
T Consensus       234 ------~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~~~  278 (297)
T 3fxz_A          234 ------PELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHQFLKIAKP  278 (297)
T ss_dssp             ------CCCSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGCCC
T ss_pred             ------CCCCCccccCHHHHHHHHHHccCChhHCcCHHHHhhChhhcccCc
Confidence                  011123345678999999999999999999999999999996543

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=100.00  E-value=6.2e-33  Score=228.81  Aligned_cols=192  Identities=25%  Similarity=0.343  Sum_probs=147.3

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcCcccCcCCCcccchHHhhh-cCCC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILR-AGYS   81 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~PE~~~~-~~~~   81 (237)
                      +++.++..++.|++.||.|+|..+++||||||+||+++.++.+||+|||++...........+++.|+|||++.+ ..++
T Consensus       123 ~~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~  202 (353)
T 3coi_A          123 FSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTRWYRAPEVILSWMHYN  202 (353)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTCCEEECSTTCTTC--------CCSBCCSCHHHHSCCSCCC
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEeECCCCcEEEeecccccCCCCCccccccCcCcCCHHHHhCcCCCC
Confidence            678899999999999999999999999999999999999999999999998766555556678999999999987 5689


Q ss_pred             chhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchh--hhcccCccchhccccCCc
Q 026540           82 FSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKD--YFDRHGDLKRIRRLKFWS  159 (237)
Q Consensus        82 ~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~  159 (237)
                      .++|+||+|++++++++|..||.+.      .....+..+.+..+.++..+.........  +......      .....
T Consensus       203 ~~~Di~slG~il~el~~g~~pf~~~------~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~  270 (353)
T 3coi_A          203 QTVDIWSVGCIMAEMLTGKTLFKGK------DYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQ------TPRKD  270 (353)
T ss_dssp             TTHHHHHHHHHHHHHHHSSCSSBSS------CHHHHHHHHHHHHCBCCHHHHTTCSCHHHHHHHHTSCB------CSSCC
T ss_pred             chhhHHHHHHHHHHHHhCCCCCCCC------CHHHHHHHHHHHhCCCCHHHHHHHhhHHHHHHHHhCcC------CCCcc
Confidence            9999999999999999999999876      36778888888888887776543332110  1100000      00000


Q ss_pred             hhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccCCcc
Q 026540          160 LDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNSTRD  213 (237)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~~~~  213 (237)
                             ........+..+.+||.+||+.||.+|||++|+++||||........
T Consensus       271 -------~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~~~~~~~~  317 (353)
T 3coi_A          271 -------FTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPFRDPEE  317 (353)
T ss_dssp             -------TTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTTCCGGG
T ss_pred             -------HHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcCcchhhccCccc
Confidence                   01122345788999999999999999999999999999997755443

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=100.00  E-value=8.7e-34  Score=233.90  Aligned_cols=161  Identities=18%  Similarity=0.223  Sum_probs=134.0

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecC---cCcccCcCCCcccchHHhhhcC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRAN---KQFAEEIQTRQYRAPEVILRAG   79 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~---~~~~~~~~~~~~~~PE~~~~~~   79 (237)
                      +++.++..++.|++.||.|+|..+++||||||+|||++.++.+||+|||++....   .......|++.|+|||++.+..
T Consensus       118 ~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~  197 (353)
T 2i0e_A          118 FKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKTFCGTPDYIAPEIIAYQP  197 (353)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTCCBCCCCSCGGGCCHHHHTTCC
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEEcCCCcEEEEeCCcccccccCCcccccccCCccccChhhhcCCC
Confidence            5788999999999999999999999999999999999999999999999986532   2344567899999999999889


Q ss_pred             CCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCc
Q 026540           80 YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWS  159 (237)
Q Consensus        80 ~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (237)
                      ++.++|+||+|+++++|++|..||.+.+      .......+.                                     
T Consensus       198 ~~~~~DiwslG~il~ell~G~~Pf~~~~------~~~~~~~i~-------------------------------------  234 (353)
T 2i0e_A          198 YGKSVDWWAFGVLLYEMLAGQAPFEGED------EDELFQSIM-------------------------------------  234 (353)
T ss_dssp             BSTHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHH-------------------------------------
T ss_pred             cCCcccccchHHHHHHHHcCCCCCCCCC------HHHHHHHHH-------------------------------------
Confidence            9999999999999999999999997652      222222221                                     


Q ss_pred             hhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCC-----HHHHhcCCCcCcccCC
Q 026540          160 LDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPT-----AQQCLQHPWLSLRNST  211 (237)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t-----~~ell~hp~f~~~~~~  211 (237)
                           .....++...+.++.+||.+||+.||.+||+     ++++++||||+..++.
T Consensus       235 -----~~~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h~~f~~~~w~  286 (353)
T 2i0e_A          235 -----EHNVAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDWE  286 (353)
T ss_dssp             -----HCCCCCCTTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHTSGGGTTCCHH
T ss_pred             -----hCCCCCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCccccCCCHH
Confidence                 1122334456788999999999999999994     7999999999987653

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=100.00  E-value=4.1e-33  Score=230.84  Aligned_cols=191  Identities=23%  Similarity=0.304  Sum_probs=148.3

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC------cccCcCCCcccchHHhh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ------FAEEIQTRQYRAPEVIL   76 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~------~~~~~~~~~~~~PE~~~   76 (237)
                      +++.++..++.|++.||.|+|..+++||||||+||+++.++.++|+|||++......      .....|++.|+|||++.
T Consensus       125 ~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  204 (364)
T 3qyz_A          125 LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML  204 (364)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCGGGCBCCTTCCCCSCGGGCCHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCeecCCCChHhEEECCCCCEEEEeCcceEecCCCCCccccccccccccCCCCCHHhc
Confidence            678899999999999999999999999999999999999999999999999755422      23457899999999987


Q ss_pred             hcC-CCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccc
Q 026540           77 RAG-YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRL  155 (237)
Q Consensus        77 ~~~-~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (237)
                      +.. ++.++|+||+|++++++++|..||.+.      ...+.+..+....+.++.................    .....
T Consensus       205 ~~~~~~~~~DiwslG~il~ell~g~~pf~~~------~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~  274 (364)
T 3qyz_A          205 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGK------HYLDQLNHILGILGSPSQEDLNCIINLKARNYLL----SLPHK  274 (364)
T ss_dssp             TBCSCSTHHHHHHHHHHHHHHHHSSCSSCCS------SGGGHHHHHHHHHCSCCHHHHHTCCCHHHHHHHH----TSCCC
T ss_pred             CCCCCCcchhHHHHHHHHHHHHHCCCCCCCC------ChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHH----hcCCc
Confidence            654 899999999999999999999999876      4677888888889888877654333221110000    00000


Q ss_pred             cCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccC
Q 026540          156 KFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNS  210 (237)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~  210 (237)
                      ...+....       ....+.++.+||.+||+.||.+|||++|+|+||||.....
T Consensus       275 ~~~~~~~~-------~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~  322 (364)
T 3qyz_A          275 NKVPWNRL-------FPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYD  322 (364)
T ss_dssp             CCCCHHHH-------CTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGTTTCC
T ss_pred             cCCCHHHh-------CCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchhhccC
Confidence            00111111       2234678899999999999999999999999999998744

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=100.00  E-value=3.4e-33  Score=230.14  Aligned_cols=194  Identities=18%  Similarity=0.247  Sum_probs=146.6

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecC-------cCcccCcCCCcccchHH
Q 026540            2 TIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRAN-------KQFAEEIQTRQYRAPEV   74 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~-------~~~~~~~~~~~~~~PE~   74 (237)
                      .+++.++..++.|++.||.|+|..+++||||||+||+++.++.+||+|||++....       .......+++.|+|||+
T Consensus       120 ~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~  199 (351)
T 3mi9_A          120 KFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPEL  199 (351)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCCCSSSSCCCCCSSCSCGGGCCHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCCEEEccchhcccccccccccccccCCcccccCccCchh
Confidence            36788999999999999999999999999999999999999999999999986543       22334577899999999


Q ss_pred             hhhc-CCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhc
Q 026540           75 ILRA-GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIR  153 (237)
Q Consensus        75 ~~~~-~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (237)
                      +.+. .++.++|+||+|++++++++|..||.+.      .....+..+....+.++...+....... .+.....   ..
T Consensus       200 ~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~------~~~~~~~~i~~~~~~~~~~~~~~~~~~~-~~~~~~~---~~  269 (351)
T 3mi9_A          200 LLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGN------TEQHQLALISQLCGSITPEVWPNVDNYE-LYEKLEL---VK  269 (351)
T ss_dssp             HTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCS------SHHHHHHHHHHHHCCCCTTTSTTGGGCG-GGTSSCC---CS
T ss_pred             hcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCC------ChHHHHHHHHHHhCCCChhhccccccch-hhccccc---cc
Confidence            9864 5899999999999999999999999876      4778888888888887766543322111 1111000   00


Q ss_pred             cccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccCC
Q 026540          154 RLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNST  211 (237)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~~  211 (237)
                      . ...........     ...++.+.+||.+||+.||++|||++|+|+||||......
T Consensus       270 ~-~~~~~~~~~~~-----~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~~  321 (351)
T 3mi9_A          270 G-QKRKVKDRLKA-----YVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWSDPMP  321 (351)
T ss_dssp             S-CCCCHHHHHHH-----HHCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGSSSCC
T ss_pred             c-cccCHHHHhhh-----ccCChHHHHHHHHHhcCChhhCCCHHHHhCCCCcCCCCCc
Confidence            0 00011111110     1124678899999999999999999999999999865443

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=100.00  E-value=5.5e-34  Score=234.41  Aligned_cols=160  Identities=24%  Similarity=0.274  Sum_probs=133.3

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecC---cCcccCcCCCcccchHHhhhcC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRAN---KQFAEEIQTRQYRAPEVILRAG   79 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~---~~~~~~~~~~~~~~PE~~~~~~   79 (237)
                      +++.++..++.|++.||.|+|+.+++||||||+|||++.++.+||+|||++....   .......|++.|+|||++.+..
T Consensus       115 ~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~  194 (345)
T 1xjd_A          115 FDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNTFCGTPDYIAPEILLGQK  194 (345)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTCCBCCCCSCGGGCCHHHHTTCC
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCeEeCCCChhhEEECCCCCEEEeEChhhhhcccCCCcccCCCCCcccCChhhhcCCC
Confidence            6788999999999999999999999999999999999999999999999986532   2344568899999999999988


Q ss_pred             CCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCc
Q 026540           80 YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWS  159 (237)
Q Consensus        80 ~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (237)
                      ++.++|+||+|+++++|++|..||.+.+      .......+.                                     
T Consensus       195 ~~~~~DiwslG~il~ell~g~~Pf~~~~------~~~~~~~i~-------------------------------------  231 (345)
T 1xjd_A          195 YNHSVDWWSFGVLLYEMLIGQSPFHGQD------EEELFHSIR-------------------------------------  231 (345)
T ss_dssp             BCTHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHH-------------------------------------
T ss_pred             CCChhhhHHHHHHHHHHhcCCCCCCCCC------HHHHHHHHH-------------------------------------
Confidence            9999999999999999999999997652      222222211                                     


Q ss_pred             hhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHH-HHhcCCCcCcccC
Q 026540          160 LDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQ-QCLQHPWLSLRNS  210 (237)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~-ell~hp~f~~~~~  210 (237)
                           ......+...+.++.+||.+||+.||.+||++. ++++||||...++
T Consensus       232 -----~~~~~~p~~~s~~~~~li~~lL~~dp~~R~~~~~~i~~hp~f~~~~w  278 (345)
T 1xjd_A          232 -----MDNPFYPRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFREINW  278 (345)
T ss_dssp             -----HCCCCCCTTSCHHHHHHHHHHSCSSGGGSBTTBSCGGGSGGGTTCCH
T ss_pred             -----hCCCCCCcccCHHHHHHHHHHhcCCHhHcCCChHHHHcCccccCCCH
Confidence                 111123344577899999999999999999998 9999999998764

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=100.00  E-value=1.9e-33  Score=231.33  Aligned_cols=169  Identities=18%  Similarity=0.235  Sum_probs=133.2

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecC---cCcccCcCCCcccchHHhhhcC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRAN---KQFAEEIQTRQYRAPEVILRAG   79 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~---~~~~~~~~~~~~~~PE~~~~~~   79 (237)
                      +++.++..++.|++.||.|+|+.+++||||||+|||++.++.+||+|||++....   .......|++.|+|||++.+..
T Consensus       107 l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~  186 (345)
T 3a8x_A          107 LPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGED  186 (345)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCGGGCBCSCCTTCCBCCCCSCGGGCCHHHHTTCC
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCCCEEEEeccccccccCCCCcccccCCCccccCccccCCCC
Confidence            6788999999999999999999999999999999999999999999999986432   2344568899999999999888


Q ss_pred             CCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCc
Q 026540           80 YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWS  159 (237)
Q Consensus        80 ~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (237)
                      ++.++|+||+||++++|++|..||......... .......+                                      
T Consensus       187 ~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~-~~~~~~~~--------------------------------------  227 (345)
T 3a8x_A          187 YGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNP-DQNTEDYL--------------------------------------  227 (345)
T ss_dssp             BCTHHHHHHHHHHHHHHHHSSCTTTTTTC--------CHHHH--------------------------------------
T ss_pred             CChHHhHHHHHHHHHHHHhCCCCcCCccccccc-ccccHHHH--------------------------------------
Confidence            999999999999999999999999653211000 00000000                                      


Q ss_pred             hhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCH------HHHhcCCCcCcccC
Q 026540          160 LDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTA------QQCLQHPWLSLRNS  210 (237)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~------~ell~hp~f~~~~~  210 (237)
                      ...+......++...+..+.+||.+||+.||.+||++      +|+++||||.+.++
T Consensus       228 ~~~i~~~~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~hp~f~~~~w  284 (345)
T 3a8x_A          228 FQVILEKQIRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDW  284 (345)
T ss_dssp             HHHHHHCCCCCCTTSCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHTSGGGTTCCH
T ss_pred             HHHHHcCCCCCCCCCCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhcCCccCCCCH
Confidence            1111122233455667889999999999999999995      89999999998764

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=3.5e-33  Score=232.82  Aligned_cols=188  Identities=23%  Similarity=0.320  Sum_probs=148.3

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccC-CCCcEEEeecCcceecC--cCcccCcCCCcccchHHhhhcC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDG-IDMRCKVVDFGNACRAN--KQFAEEIQTRQYRAPEVILRAG   79 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~-~~~~~kl~dfg~~~~~~--~~~~~~~~~~~~~~PE~~~~~~   79 (237)
                      +++..+..++.|++.||.|+|+.+++||||||+||+++ .++.+||+|||++....  .......+++.|+|||.+.+..
T Consensus       138 l~~~~~~~i~~qi~~aL~~LH~~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~  217 (383)
T 3eb0_A          138 IPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSVAYICSRFYRAPELMLGAT  217 (383)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSCCCCCCCCSSCCCHHHHTTCS
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCCCcCcccCCCccCHHHhcCCC
Confidence            67888999999999999999999999999999999997 57899999999997543  3344557799999999998754


Q ss_pred             -CCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCC
Q 026540           80 -YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFW  158 (237)
Q Consensus        80 -~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (237)
                       ++.++|+||+||+++++++|..||.+.      ...+++..+.+..|.++...+........-.       ........
T Consensus       218 ~~~~~~DiwslG~il~ell~g~~pf~~~------~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~-------~~~~~~~~  284 (383)
T 3eb0_A          218 EYTPSIDLWSIGCVFGELILGKPLFSGE------TSIDQLVRIIQIMGTPTKEQMIRMNPHYTEV-------RFPTLKAK  284 (383)
T ss_dssp             SCCTHHHHHHHHHHHHHHHHSSCSSCCS------SHHHHHHHHHHHHCCCCHHHHHHHCTTC--C-------CCCCCCCC
T ss_pred             CCCcchhhhhHHHHHHHHHhCCCCCCCC------ChHHHHHHHHHHhCCCCHHHHHHhCcccccc-------cCCccCcc
Confidence             899999999999999999999999876      4888999999999988877654322110000       00000011


Q ss_pred             chhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCccc
Q 026540          159 SLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRN  209 (237)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~  209 (237)
                      ....      .++...+..+.+||.+||++||.+|||+.|+++||||+...
T Consensus       285 ~~~~------~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~  329 (383)
T 3eb0_A          285 DWRK------ILPEGTPSLAIDLLEQILRYEPDLRINPYEAMAHPFFDHLR  329 (383)
T ss_dssp             CHHH------HSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGHHHH
T ss_pred             cHHh------hCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcCHHHHHHH
Confidence            1111      12444678899999999999999999999999999998653

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=100.00  E-value=4.5e-33  Score=236.51  Aligned_cols=163  Identities=23%  Similarity=0.298  Sum_probs=134.2

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhh-hcCCccCCCCCccccCCCCcEEEeecCcceecC---cCcccCcCCCcccchHHhhhc
Q 026540            3 IVEKKLKRRAKRAVANISIRRA-SMGGIELPKPERCLDGIDMRCKVVDFGNACRAN---KQFAEEIQTRQYRAPEVILRA   78 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~-~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~---~~~~~~~~~~~~~~PE~~~~~   78 (237)
                      +++.++..++.|++.||.|+|+ .+++||||||+|||++.++.+||+|||++....   .......||+.|+|||++.+.
T Consensus       245 ~~~~~~~~~~~qi~~aL~~LH~~~giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~  324 (446)
T 4ejn_A          245 FSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDN  324 (446)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC-----CCSSSCGGGCCHHHHHTS
T ss_pred             CCHHHHHHHHHHHHHHHHHHhhcCCEEECCCCHHHEEECCCCCEEEccCCCceeccCCCcccccccCCccccCHhhcCCC
Confidence            5788999999999999999998 899999999999999999999999999986432   234456889999999999999


Q ss_pred             CCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCC
Q 026540           79 GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFW  158 (237)
Q Consensus        79 ~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (237)
                      .++.++|+||+|++++++++|..||.+..      .......+                                     
T Consensus       325 ~~~~~~DiwslG~il~ell~g~~Pf~~~~------~~~~~~~i-------------------------------------  361 (446)
T 4ejn_A          325 DYGRAVDWWGLGVVMYEMMCGRLPFYNQD------HEKLFELI-------------------------------------  361 (446)
T ss_dssp             CCCTHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHH-------------------------------------
T ss_pred             CCCCccchhhhHHHHHHHhhCCCCCCCCC------HHHHHHHH-------------------------------------
Confidence            99999999999999999999999997652      22222221                                     


Q ss_pred             chhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCC-----CHHHHhcCCCcCcccCCcc
Q 026540          159 SLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRP-----TAQQCLQHPWLSLRNSTRD  213 (237)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~-----t~~ell~hp~f~~~~~~~~  213 (237)
                           ......++...++.+.+||.+||+.||.+||     |++|+++||||.+.++...
T Consensus       362 -----~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~hp~f~~~~~~~~  416 (446)
T 4ejn_A          362 -----LMEEIRFPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVWQHV  416 (446)
T ss_dssp             -----HHCCCCCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTTCCHHHH
T ss_pred             -----HhCCCCCCccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHhCccccCCCHHHH
Confidence                 1112233445678899999999999999999     9999999999998865443

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=100.00  E-value=2.4e-32  Score=222.66  Aligned_cols=189  Identities=23%  Similarity=0.307  Sum_probs=147.9

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCc--CcccCcCCCcccchHHhhhcCC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK--QFAEEIQTRQYRAPEVILRAGY   80 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~--~~~~~~~~~~~~~PE~~~~~~~   80 (237)
                      +++.++..++.|++.||.|+|..+++|+||||+||+++.++.++|+|||++.....  ......++..|+|||++.+..+
T Consensus       117 ~~~~~~~~~~~qi~~~l~~lH~~gi~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  196 (326)
T 1blx_A          117 VPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSY  196 (326)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECSCCSCCCCCGGGGGCCCCCCCTTCCHHHHTTCCC
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCceeccCCHHHeEEcCCCCEEEecCcccccccCCCCccccccccceeCHHHHhcCCC
Confidence            67899999999999999999999999999999999999999999999999865442  2334577899999999998889


Q ss_pred             CchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchh-hhcccCccchhccccCCc
Q 026540           81 SFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKD-YFDRHGDLKRIRRLKFWS  159 (237)
Q Consensus        81 ~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~  159 (237)
                      +.++|+||+|++++++++|..||.+.      .....+..+.+..+.++...+........ .+...         ...+
T Consensus       197 ~~~~Di~slG~il~~l~~g~~pf~~~------~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~  261 (326)
T 1blx_A          197 ATPVDLWSVGCIFAEMFRRKPLFRGS------SDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSK---------SAQP  261 (326)
T ss_dssp             CTHHHHHHHHHHHHHHHHSSCSCCCS------SHHHHHHHHHHHHCCCCGGGSCTTCSSCGGGSCCC---------CCCC
T ss_pred             CcchhHHHHHHHHHHHHcCCCCCCCC------CHHHHHHHHHHHcCCCCcccCccccccchhhhccc---------Ccch
Confidence            99999999999999999999999876      36677777877777665544322111110 11000         0000


Q ss_pred             hhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccCCcc
Q 026540          160 LDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNSTRD  213 (237)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~~~~  213 (237)
                      .       .......+..+.+||.+||+.||.+|||++|+++||||.....+..
T Consensus       262 ~-------~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~~~~~~  308 (326)
T 1blx_A          262 I-------EKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDLERCKE  308 (326)
T ss_dssp             G-------GGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTTCCCCCC
T ss_pred             h-------hhccccCCHHHHHHHHHHcCCCcccCCCHHHHhcCccccccchhhh
Confidence            0       1123345678899999999999999999999999999998765543

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=100.00  E-value=7e-34  Score=236.55  Aligned_cols=154  Identities=14%  Similarity=0.185  Sum_probs=126.8

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcCcccCcCCCcccchHHhhhc----
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRA----   78 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~PE~~~~~----   78 (237)
                      +++..+..++.|++.||+|+|+.+++||||||+|||++.++.+||+|||++...........| +.|+|||++.+.    
T Consensus       203 l~~~~~~~i~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~g-~~y~aPE~~~~~~~~~  281 (377)
T 3byv_A          203 LVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGARVVSSVS-RGFEPPELEARRATIS  281 (377)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCGGGCEETTCEEECCCC-TTCCCHHHHHHHTSTH
T ss_pred             ccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEechhheecCCcccCCCC-cCccChhhhccccccc
Confidence            446788889999999999999999999999999999999999999999999876666666677 999999999988    


Q ss_pred             -------CCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccch
Q 026540           79 -------GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKR  151 (237)
Q Consensus        79 -------~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (237)
                             .++.++|+||+|++++++++|..||........                                        
T Consensus       282 ~~~~~~~~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~----------------------------------------  321 (377)
T 3byv_A          282 YHRDRRTLMTFSFDAWALGLVIYWIWCADLPITKDAALGG----------------------------------------  321 (377)
T ss_dssp             HHHCCEEECCHHHHHHHHHHHHHHHHHSSCCC------CC----------------------------------------
T ss_pred             ccccccccCChhhhHHHHHHHHHHHHHCCCCCcccccccc----------------------------------------
Confidence                   799999999999999999999999965431100                                        


Q ss_pred             hccccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCccc
Q 026540          152 IRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRN  209 (237)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~  209 (237)
                              ....    ......++..+.+||.+||+.||.+|||+.|+++||||....
T Consensus       322 --------~~~~----~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~~~~  367 (377)
T 3byv_A          322 --------SEWI----FRSCKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQLR  367 (377)
T ss_dssp             --------SGGG----GSSCCCCCHHHHHHHHHHTCSSGGGCCCHHHHHTSHHHHHHH
T ss_pred             --------hhhh----hhhccCCCHHHHHHHHHHcCCCchhCCCHHHHhhChHHHHHH
Confidence                    0000    001123467889999999999999999999999999998654

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=100.00  E-value=1.7e-33  Score=230.77  Aligned_cols=158  Identities=20%  Similarity=0.287  Sum_probs=130.0

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCc--CcccCcCCCcccchHHhhhcCC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK--QFAEEIQTRQYRAPEVILRAGY   80 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~--~~~~~~~~~~~~~PE~~~~~~~   80 (237)
                      +++.++..++.|++.||.|+|..+++||||||+||+++.++.+||+|||++.....  ......|++.|+|||++.+..+
T Consensus       105 l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~~~~~~~gt~~y~aPE~~~~~~~  184 (336)
T 3h4j_B          105 MTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVINGKLY  184 (336)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHTCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSBTTCCCTTSTTTSCGGGSCCSGG
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCeEecCCchhhEEEcCCCCEEEEEeccceeccCCcccccccCCcCcCCHHHHcCCCC
Confidence            67889999999999999999999999999999999999999999999999865432  2345678999999999987765


Q ss_pred             -CchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCc
Q 026540           81 -SFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWS  159 (237)
Q Consensus        81 -~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (237)
                       +.++|+||+|++++++++|..||.+......                               +                
T Consensus       185 ~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~-------------------------------~----------------  217 (336)
T 3h4j_B          185 AGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNL-------------------------------F----------------  217 (336)
T ss_dssp             GCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTC-------------------------------B----------------
T ss_pred             CCCccchhHHHHHHHHHHhCCCCCCCccHHHH-------------------------------H----------------
Confidence             7899999999999999999999975431100                               0                


Q ss_pred             hhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcc
Q 026540          160 LDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLR  208 (237)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~  208 (237)
                       ..........+...++.+.+||.+||+.||.+|||++|+++||||+..
T Consensus       218 -~~i~~~~~~~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp~~~~~  265 (336)
T 3h4j_B          218 -KKVNSCVYVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRRDPWFNVN  265 (336)
T ss_dssp             -CCCCSSCCCCCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTTCHHHHTT
T ss_pred             -HHHHcCCCCCcccCCHHHHHHHHHHcCCChhHCcCHHHHHhChhhccC
Confidence             000011123345567889999999999999999999999999999854

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=100.00  E-value=1.1e-32  Score=225.12  Aligned_cols=195  Identities=16%  Similarity=0.266  Sum_probs=140.4

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCC-cEEEeecCcceecC--cCcccCcCCCcccchHHhhh-c
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDM-RCKVVDFGNACRAN--KQFAEEIQTRQYRAPEVILR-A   78 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~-~~kl~dfg~~~~~~--~~~~~~~~~~~~~~PE~~~~-~   78 (237)
                      +++.++..++.|++.||.|+|..+++||||||+|||++.++ .++|+|||++....  .......++..|+|||.+.+ .
T Consensus       127 ~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~y~aPE~~~~~~  206 (330)
T 3nsz_A          127 LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQ  206 (330)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCCTTCEECCTTCCCCSCCSCGGGCCHHHHTTCC
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCCCccccccccccccChhhhcCCC
Confidence            57889999999999999999999999999999999999766 89999999997543  23445678899999999987 5


Q ss_pred             CCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHH-h-cCCC-chhhhcccCccchhccc
Q 026540           79 GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIA-I-GGAQ-SKDYFDRHGDLKRIRRL  155 (237)
Q Consensus        79 ~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~-~~~~~~~~~~~~~~~~~  155 (237)
                      .++.++|+||+|++++++++|..||....     .....+..+....+.....-. . .... ...+......      .
T Consensus       207 ~~~~~~DiwslG~il~~ll~g~~p~~~~~-----~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~  275 (330)
T 3nsz_A          207 MYDYSLDMWSLGCMLASMIFRKEPFFHGH-----DNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGR------H  275 (330)
T ss_dssp             CCCTHHHHHHHHHHHHHHHHTCSSSSCCS-----SHHHHHHHHHHHHCHHHHHHHHHHTTCCCCTHHHHHHCC------C
T ss_pred             cCCchhhHHHHHHHHHHHHhCCCCcccCC-----chHHHHHHHHHhcCCchhhhHHHHhccccccchhhhhhh------c
Confidence            68999999999999999999999996543     466677766666654221111 0 0000 0000000000      0


Q ss_pred             cCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccC
Q 026540          156 KFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNS  210 (237)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~  210 (237)
                      .........  ........+.++.+||.+||++||.+|||++|+|+||||+...+
T Consensus       276 ~~~~~~~~~--~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~hp~f~~~~~  328 (330)
T 3nsz_A          276 SRKRWERFV--HSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVVK  328 (330)
T ss_dssp             CCCCGGGGC--CTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTSGGGTTCC-
T ss_pred             cccchhhhc--cccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcCccHhhhcc
Confidence            000000000  01112335788999999999999999999999999999997754

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=100.00  E-value=6.3e-33  Score=235.11  Aligned_cols=162  Identities=23%  Similarity=0.287  Sum_probs=130.3

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccC---CCCcEEEeecCcceecCcC---cccCcCCCcccchHHhh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDG---IDMRCKVVDFGNACRANKQ---FAEEIQTRQYRAPEVIL   76 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~---~~~~~kl~dfg~~~~~~~~---~~~~~~~~~~~~PE~~~   76 (237)
                      +++.++..++.|++.||.|+|..+++||||||+|||++   .++.+||+|||++......   .....|++.|+|||++.
T Consensus       107 ~~e~~~~~i~~qil~aL~~lH~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~~~~~~~~~~gt~~Y~APE~l~  186 (444)
T 3soa_A          107 YSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLR  186 (444)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCTTCCBCCCSCSCGGGCCHHHHT
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEeccCCCCcEEEccCceeEEecCCCceeecccCCcccCCHHHhc
Confidence            57899999999999999999999999999999999998   4578999999999655432   23467899999999999


Q ss_pred             hcCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcccc
Q 026540           77 RAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLK  156 (237)
Q Consensus        77 ~~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (237)
                      +..++.++|+||+|++++++++|..||.+..      .......+.......+.                          
T Consensus       187 ~~~~~~~~DIwSlGvilyell~G~~Pf~~~~------~~~~~~~i~~~~~~~~~--------------------------  234 (444)
T 3soa_A          187 KDPYGKPVDLWACGVILYILLVGYPPFWDED------QHRLYQQIKAGAYDFPS--------------------------  234 (444)
T ss_dssp             TCCBCTHHHHHHHHHHHHHHHHSSCSCCCSS------HHHHHHHHHHTCCCCCT--------------------------
T ss_pred             CCCCCCccccHHHHHHHHHHHhCCCCCCCcc------HHHHHHHHHhCCCCCCc--------------------------
Confidence            8889999999999999999999999997652      33333222211100000                          


Q ss_pred             CCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcc
Q 026540          157 FWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLR  208 (237)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~  208 (237)
                                  ......++.+.+||.+||+.||.+|||+.|+|+||||...
T Consensus       235 ------------~~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~hp~~~~~  274 (444)
T 3soa_A          235 ------------PEWDTVTPEAKDLINKMLTINPSKRITAAEALKHPWISHR  274 (444)
T ss_dssp             ------------TTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSCTTHHH
T ss_pred             ------------cccccCCHHHHHHHHHHcCCChhHCCCHHHHhcCccccCC
Confidence                        0112346789999999999999999999999999999854

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=100.00  E-value=1.2e-32  Score=222.98  Aligned_cols=193  Identities=23%  Similarity=0.308  Sum_probs=140.4

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCc---CcccCcCCCcccchHHhhh-c
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK---QFAEEIQTRQYRAPEVILR-A   78 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~---~~~~~~~~~~~~~PE~~~~-~   78 (237)
                      +++..+..++.|++.||.|+|..+++|+||||+||+++.++.++|+|||++.....   ......+++.|+|||.+.+ .
T Consensus        99 ~~~~~~~~i~~~l~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  178 (311)
T 4agu_A           99 VPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVGDT  178 (311)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECC------------GGGCCHHHHHTCS
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCCcCCCCChhhEEEcCCCCEEEeeCCCchhccCcccccCCCcCCccccChHHHhcCC
Confidence            67889999999999999999999999999999999999999999999999876542   2334577899999999987 4


Q ss_pred             CCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCC
Q 026540           79 GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFW  158 (237)
Q Consensus        79 ~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (237)
                      .++.++|+||+|++++++++|..||.+.      ...+....+.+..+...+.......... ++.... ....  ....
T Consensus       179 ~~~~~~Di~slG~il~~l~~g~~p~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~--~~~~  248 (311)
T 4agu_A          179 QYGPPVDVWAIGCVFAELLSGVPLWPGK------SDVDQLYLIRKTLGDLIPRHQQVFSTNQ-YFSGVK-IPDP--EDME  248 (311)
T ss_dssp             CCCTHHHHHHHHHHHHHHHHSSCSCCCS------SHHHHHHHHHHHHCSCCHHHHHHHHTCG-GGTTCC-CCCC--SSCC
T ss_pred             CCCcchhhHHHHHHHHHHHhCCCCCCCC------CHHHHHHHHHHHhccccccccccccccc-ccccCc-CCCc--cccc
Confidence            6899999999999999999999999876      4677778888888776665432111110 000000 0000  0000


Q ss_pred             chhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccCCc
Q 026540          159 SLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNSTR  212 (237)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~~~  212 (237)
                      +....       ....+..+.+|+.+||+.||.+|||++|+++||||+......
T Consensus       249 ~~~~~-------~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~~~~  295 (311)
T 4agu_A          249 PLELK-------FPNISYPALGLLKGCLHMDPTERLTCEQLLHHPYFENIREIE  295 (311)
T ss_dssp             CHHHH-------CTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTSGGGTTCC---
T ss_pred             hhhhh-------cccccHHHHHHHHHHccCChhhcCCHHHHhcChHHHhccCHH
Confidence            00100       123567789999999999999999999999999999876543

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=9.7e-33  Score=227.12  Aligned_cols=188  Identities=23%  Similarity=0.296  Sum_probs=145.4

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCc---CcccCcCCCcccchHHhhhc-
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK---QFAEEIQTRQYRAPEVILRA-   78 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~---~~~~~~~~~~~~~PE~~~~~-   78 (237)
                      +++.++..++.|++.||.|+|..+++||||||+||+++.++.+||+|||++.....   ......+++.|+|||++.+. 
T Consensus       109 ~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~  188 (346)
T 1ua2_A          109 LTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGAR  188 (346)
T ss_dssp             CCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCCCCCCCSCCCCTTCCHHHHTTCS
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEEcCCCCEEEEecccceeccCCcccCCcccccccccCchHhhCCC
Confidence            56788999999999999999999999999999999999999999999999865432   23455789999999999765 


Q ss_pred             CCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCC
Q 026540           79 GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFW  158 (237)
Q Consensus        79 ~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (237)
                      .++.++|+||+|++++++++|..||.+.      .....+..+.+..+.++...+.......++....       .....
T Consensus       189 ~~~~~~DiwslG~il~ell~g~~~~~~~------~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~  255 (346)
T 1ua2_A          189 MYGVGVDMWAVGCILAELLLRVPFLPGD------SDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFK-------SFPGI  255 (346)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHSSCSSCCS------SHHHHHHHHHHHHCCCCTTTSSSTTSSTTCCCCC-------CCCCC
T ss_pred             CCCchhhhHhHHHHHHHHHHCCCCCCCC------CHHHHHHHHHHHcCCCChhhhhhhccCccccccc-------ccCCC
Confidence            4899999999999999999999998766      4677788888888776655443322221111100       00011


Q ss_pred             chhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccC
Q 026540          159 SLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNS  210 (237)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~  210 (237)
                      +....       ....+..+.+||.+||+.||.+|||++|+++||||.....
T Consensus       256 ~~~~~-------~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h~~f~~~~~  300 (346)
T 1ua2_A          256 PLHHI-------FSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNRPG  300 (346)
T ss_dssp             CHHHH-------CTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSGGGTSSSC
T ss_pred             ChHHh-------hccCCHHHHHHHHHHhccChhhCCCHHHHhcChhhhcCCC
Confidence            11111       2334678999999999999999999999999999986543

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=100.00  E-value=1.3e-32  Score=224.74  Aligned_cols=164  Identities=23%  Similarity=0.344  Sum_probs=132.4

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCC----cEEEeecCcceecC--cCcccCcCCCcccchHHhh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDM----RCKVVDFGNACRAN--KQFAEEIQTRQYRAPEVIL   76 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~----~~kl~dfg~~~~~~--~~~~~~~~~~~~~~PE~~~   76 (237)
                      +++.++..++.|++.||.|+|..+++||||||+||+++.++    .+||+|||++....  .......|++.|+|||++.
T Consensus       111 ~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~  190 (326)
T 2y0a_A          111 LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVN  190 (326)
T ss_dssp             CBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSSSSSCCEEECCCTTCEECCTTSCCCCCCSCTTTCCHHHHT
T ss_pred             cCHHHHHHHHHHHHHHHHHHHHCCeEcCCCCHHHEEEecCCCCCCCEEEEECCCCeECCCCCccccccCCcCcCCceeec
Confidence            67899999999999999999999999999999999998877    89999999997653  3344567899999999998


Q ss_pred             hcCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcccc
Q 026540           77 RAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLK  156 (237)
Q Consensus        77 ~~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (237)
                      +..++.++|+||+|++++++++|..||.+..      ....+..+.......+...                        
T Consensus       191 ~~~~~~~~DiwslG~il~~ll~g~~pf~~~~------~~~~~~~~~~~~~~~~~~~------------------------  240 (326)
T 2y0a_A          191 YEPLGLEADMWSIGVITYILLSGASPFLGDT------KQETLANVSAVNYEFEDEY------------------------  240 (326)
T ss_dssp             TCCCCTHHHHHHHHHHHHHHHHSCCSSCCSS------HHHHHHHHHHTCCCCCHHH------------------------
T ss_pred             CCCCCcHHHHHHHHHHHHHHHHCcCCCCCCC------HHHHHHHHHhcCCCcCccc------------------------
Confidence            8889999999999999999999999997652      3333333222111111100                        


Q ss_pred             CCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccC
Q 026540          157 FWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNS  210 (237)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~  210 (237)
                                    ....+..+.+||.+||+.||.+|||++|+++||||.....
T Consensus       241 --------------~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~~~  280 (326)
T 2y0a_A          241 --------------FSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDT  280 (326)
T ss_dssp             --------------HTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHSTTTSCCSH
T ss_pred             --------------cccCCHHHHHHHHHHccCChhhCCCHHHHhcCCCccCCcc
Confidence                          1123567889999999999999999999999999997654

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=99.98  E-value=7.5e-33  Score=245.54  Aligned_cols=162  Identities=17%  Similarity=0.225  Sum_probs=136.1

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecC---cCcccCcCCCcccchHHhhhcC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRAN---KQFAEEIQTRQYRAPEVILRAG   79 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~---~~~~~~~~~~~~~~PE~~~~~~   79 (237)
                      +++.+++.++.|++.||.|+|..+|+||||||+|||++.++.+||+|||++....   .......||+.|+|||++.+..
T Consensus       439 ~~~~~~~~~~~qi~~aL~~LH~~gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~~~~~~~~GT~~Y~APE~l~~~~  518 (674)
T 3pfq_A          439 FKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKTFCGTPDYIAPEIIAYQP  518 (674)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTSEECCCCCSTTEEECSSSCEEECCCTTCEECCCTTCCBCCCCSCSSSCCHHHHTCCC
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCeEeccCChhhEEEcCCCcEEEeecceeeccccCCcccccccCCCcccCHhhhcCCC
Confidence            6788999999999999999999999999999999999999999999999987532   2344568899999999999889


Q ss_pred             CCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCc
Q 026540           80 YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWS  159 (237)
Q Consensus        80 ~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (237)
                      ++.++|+||+|+++|+|++|..||.+.+      .......+                                      
T Consensus       519 ~~~~~DvwSlGvilyelltG~~Pf~~~~------~~~~~~~i--------------------------------------  554 (674)
T 3pfq_A          519 YGKSVDWWAFGVLLYEMLAGQAPFEGED------EDELFQSI--------------------------------------  554 (674)
T ss_dssp             BSTHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHH--------------------------------------
T ss_pred             CCccceEechHHHHHHHHcCCCCCCCCC------HHHHHHHH--------------------------------------
Confidence            9999999999999999999999997653      22222222                                      


Q ss_pred             hhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCH-----HHHhcCCCcCcccCCc
Q 026540          160 LDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTA-----QQCLQHPWLSLRNSTR  212 (237)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~-----~ell~hp~f~~~~~~~  212 (237)
                          ......++..++.++.+||.+||+.||.+|+++     +||++||||...++..
T Consensus       555 ----~~~~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~h~ff~~i~w~~  608 (674)
T 3pfq_A          555 ----MEHNVAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDWEK  608 (674)
T ss_dssp             ----HSSCCCCCTTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHSSGGGSSCCHHH
T ss_pred             ----HhCCCCCCccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhcCccccCCCHHH
Confidence                111223445567889999999999999999997     9999999999876543

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=99.98  E-value=1.2e-32  Score=231.07  Aligned_cols=166  Identities=19%  Similarity=0.235  Sum_probs=133.5

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC----cccCcCCCcccchHHhhh
Q 026540            2 TIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ----FAEEIQTRQYRAPEVILR   77 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~----~~~~~~~~~~~~PE~~~~   77 (237)
                      .+++..+..++.|++.||.|+|..+++||||||+|||++.++.+||+|||++......    ....+||+.|+|||++.+
T Consensus       164 ~~~e~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g~ikL~DFG~a~~~~~~~~~~~~~~~gt~~Y~APE~l~~  243 (410)
T 3v8s_A          164 DVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKS  243 (410)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSEEECCSCCSCGGGCCHHHHHT
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeeECCCCCEEEeccceeEeeccCCcccccCCcCCccccCHHHhhc
Confidence            3678999999999999999999999999999999999999999999999999765432    235688999999999987


Q ss_pred             cC----CCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhc
Q 026540           78 AG----YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIR  153 (237)
Q Consensus        78 ~~----~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (237)
                      ..    ++.++|+||+|+++++|++|..||.+.+      .......+......                          
T Consensus       244 ~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~------~~~~~~~i~~~~~~--------------------------  291 (410)
T 3v8s_A          244 QGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADS------LVGTYSKIMNHKNS--------------------------  291 (410)
T ss_dssp             TTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSS------HHHHHHHHHTHHHH--------------------------
T ss_pred             cCCCcCCCCcceEecchHHHHHHHhCCCCCCCCC------hhhHHHHHHhcccc--------------------------
Confidence            65    7889999999999999999999997653      33333333221000                          


Q ss_pred             cccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCC--CCCHHHHhcCCCcCcccCC
Q 026540          154 RLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEK--RPTAQQCLQHPWLSLRNST  211 (237)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~--R~t~~ell~hp~f~~~~~~  211 (237)
                                  ........++.++.+||.+||+.+|.+  |++++|+++||||++.++.
T Consensus       292 ------------~~~p~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~Hp~f~~~~w~  339 (410)
T 3v8s_A          292 ------------LTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKNDQWA  339 (410)
T ss_dssp             ------------CCCCTTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTSGGGCCSSCC
T ss_pred             ------------ccCCCcccccHHHHHHHHHHccChhhhCCCCCHHHHhcCccccCCCHH
Confidence                        001111235788999999999999988  9999999999999987654

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=99.98  E-value=1.4e-32  Score=227.22  Aligned_cols=194  Identities=20%  Similarity=0.303  Sum_probs=141.6

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecC--cCcccCcCCCcccchHHhhh-c
Q 026540            2 TIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRAN--KQFAEEIQTRQYRAPEVILR-A   78 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~--~~~~~~~~~~~~~~PE~~~~-~   78 (237)
                      .+++.++..++.|++.||.|+|..+++|+||||+||+++.++.++|+|||++....  .......+++.|+|||++.+ .
T Consensus       130 ~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~  209 (362)
T 3pg1_A          130 VISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTHRWYRAPELVMQFK  209 (362)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCTTC---------------CGGGCCHHHHTTCT
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCcCEecCCChHHEEEcCCCCEEEEecCcccccccccccceecccceecCcHHhcCCC
Confidence            36789999999999999999999999999999999999999999999999986433  22334577899999999987 5


Q ss_pred             CCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCch--hhhcccCccchhcccc
Q 026540           79 GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSK--DYFDRHGDLKRIRRLK  156 (237)
Q Consensus        79 ~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~  156 (237)
                      .++.++|+||+|++++++++|..||.+.      .....+..+.+..+.++...........  .+....  .   ....
T Consensus       210 ~~~~~~DiwslG~il~~l~~g~~pf~~~------~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~--~---~~~~  278 (362)
T 3pg1_A          210 GFTKLVDMWSAGCVMAEMFNRKALFRGS------TFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNS--L---SNVP  278 (362)
T ss_dssp             TCCTHHHHHHHHHHHHHHHHSSCSCCCS------SHHHHHHHHHHHHCCCCHHHHHHTSCHHHHHHTTTC--C---CCCC
T ss_pred             CCCcHhHHHhHHHHHHHHHhCCCCCCCC------CHHHHHHHHHHHcCCCChHHhhhccchhhhHHHHhh--c---ccCC
Confidence            6899999999999999999999999876      4777888888888877665433221111  010000  0   0000


Q ss_pred             CCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccCCcc
Q 026540          157 FWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNSTRD  213 (237)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~~~~  213 (237)
                      ......       .....++.+.+||.+||+.||.+|||++|+++||||........
T Consensus       279 ~~~~~~-------~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~~~~~  328 (362)
T 3pg1_A          279 ARAWTA-------VVPTADPVALDLIAKMLEFNPQRRISTEQALRHPYFESLFDPLD  328 (362)
T ss_dssp             CCCHHH-------HSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGTTTCCGGG
T ss_pred             hhhHHh-------hCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcCchhhhccCccc
Confidence            000111       12234678899999999999999999999999999998754444

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=99.98  E-value=1.5e-32  Score=232.17  Aligned_cols=166  Identities=16%  Similarity=0.253  Sum_probs=133.8

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC----cccCcCCCcccchHHhh-
Q 026540            2 TIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ----FAEEIQTRQYRAPEVIL-   76 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~----~~~~~~~~~~~~PE~~~-   76 (237)
                      .+++..++.++.|++.||.|+|..+++||||||+|||++.++.+||+|||++......    ....+||+.|+|||++. 
T Consensus       171 ~l~e~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILl~~~g~vkL~DFGla~~~~~~~~~~~~~~~GT~~Y~APE~l~~  250 (437)
T 4aw2_A          171 RLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQA  250 (437)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSCEECCSCCSCGGGCCHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeeEcCCCCEEEcchhhhhhcccCCCcccccccCCcCeeChHHHhh
Confidence            3678999999999999999999999999999999999999999999999998654322    23357899999999998 


Q ss_pred             ----hcCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchh
Q 026540           77 ----RAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRI  152 (237)
Q Consensus        77 ----~~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (237)
                          ...++.++|+||+||++++|++|..||.+.+      .......+.....                          
T Consensus       251 ~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~------~~~~~~~i~~~~~--------------------------  298 (437)
T 4aw2_A          251 MEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAES------LVETYGKIMNHKE--------------------------  298 (437)
T ss_dssp             HHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSS------HHHHHHHHHTHHH--------------------------
T ss_pred             cccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCC------hhHHHHhhhhccc--------------------------
Confidence                3458999999999999999999999998653      3333333321100                          


Q ss_pred             ccccCCchhHHhhhhcCCC---HHhHHHHHHHHHhccccCCCC--CCCHHHHhcCCCcCcccCCcc
Q 026540          153 RRLKFWSLDRLLVDKYRFS---ETDAREFAEFLVPLLDFTPEK--RPTAQQCLQHPWLSLRNSTRD  213 (237)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~li~~~L~~dP~~--R~t~~ell~hp~f~~~~~~~~  213 (237)
                                    ...++   ...++++.+||.+||..+|.+  |++++|+++||||++.++...
T Consensus       299 --------------~~~~p~~~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~Hpff~~i~w~~l  350 (437)
T 4aw2_A          299 --------------RFQFPTQVTDVSENAKDLIRRLICSREHRLGQNGIEDFKKHPFFSGIDWDNI  350 (437)
T ss_dssp             --------------HCCCCSSCCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHTSGGGTTCCTTTG
T ss_pred             --------------cccCCcccccCCHHHHHHHHHHhcccccccCCCCHHHHhCCCccCCCCHHHH
Confidence                          01111   235788999999999988888  999999999999998876554

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=99.98  E-value=4.7e-33  Score=231.06  Aligned_cols=161  Identities=20%  Similarity=0.210  Sum_probs=133.2

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecC---cCcccCcCCCcccchHHhhhcC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRAN---KQFAEEIQTRQYRAPEVILRAG   79 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~---~~~~~~~~~~~~~~PE~~~~~~   79 (237)
                      +++.++..++.|++.||.|+|..+++||||||+|||++.++.+||+|||++....   ......+||+.|+|||++.+..
T Consensus       136 ~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~  215 (373)
T 2r5t_A          136 FLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLHKQP  215 (373)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCBCGGGBCCCCCCCSBSCCCCCCCHHHHTTCC
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCCCEEEeeCccccccccCCCccccccCCccccCHHHhCCCC
Confidence            5788999999999999999999999999999999999999999999999986422   2344568899999999999889


Q ss_pred             CCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCc
Q 026540           80 YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWS  159 (237)
Q Consensus        80 ~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (237)
                      ++.++|+||+|+++++|++|..||.+.+      .......+.                                     
T Consensus       216 ~~~~~DiwslG~il~ell~G~~Pf~~~~------~~~~~~~i~-------------------------------------  252 (373)
T 2r5t_A          216 YDRTVDWWCLGAVLYEMLYGLPPFYSRN------TAEMYDNIL-------------------------------------  252 (373)
T ss_dssp             CCTHHHHHHHHHHHHHHHHSSCTTCCSB------HHHHHHHHH-------------------------------------
T ss_pred             CCchhhhHHHHHHHHHHHcCCCCCCCCC------HHHHHHHHH-------------------------------------
Confidence            9999999999999999999999997652      222222221                                     


Q ss_pred             hhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCH----HHHhcCCCcCcccCC
Q 026540          160 LDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTA----QQCLQHPWLSLRNST  211 (237)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~----~ell~hp~f~~~~~~  211 (237)
                           .....++..++..+.+||.+||+.||.+|+++    .++++||||+..++.
T Consensus       253 -----~~~~~~~~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~i~~h~~f~~~~w~  303 (373)
T 2r5t_A          253 -----NKPLQLKPNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKSHVFFSLINWD  303 (373)
T ss_dssp             -----HSCCCCCSSSCHHHHHHHHHHTCSSGGGSTTTTTTHHHHHTSGGGTTCCHH
T ss_pred             -----hcccCCCCCCCHHHHHHHHHHcccCHHhCCCCCCCHHHHhCCccccCCCHH
Confidence                 11122334457789999999999999999986    699999999987653

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=99.98  E-value=3e-33  Score=225.98  Aligned_cols=170  Identities=15%  Similarity=0.126  Sum_probs=116.7

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhhh--------cCCccCCCCCccccCCCCcEEEeecCcceecCcC-------cccCcCC
Q 026540            2 TIVEKKLKRRAKRAVANISIRRAS--------MGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ-------FAEEIQT   66 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~~--------~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~-------~~~~~~~   66 (237)
                      ++++.++.+++.|++.||+|+|+.        +|+||||||+|||++.++.+||+|||+++.....       ....+||
T Consensus        96 ~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~~~GT  175 (303)
T 3hmm_A           96 TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGT  175 (303)
T ss_dssp             CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEEETTTTEESCC-----CC
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCccccCCCCceeeeccccccc
Confidence            356788999999999999999987        8999999999999999999999999998654321       2235799


Q ss_pred             CcccchHHhhhc------CCCchhhhhhhhhHHHHHhcCCcccCCCCCCCC--C---ChHHHHHHHHHHHCCCCHHHHhc
Q 026540           67 RQYRAPEVILRA------GYSFSVDMWSFACTAFELATGDMLFAPKSGQGF--C---EDEDHLALMMELIGKMPRKIAIG  135 (237)
Q Consensus        67 ~~~~~PE~~~~~------~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~--~---~~~~~~~~~~~~~~~~~~~~~~~  135 (237)
                      +.|+|||++.+.      .++.++|||||||++|||++|..||........  .   ........+.+...         
T Consensus       176 ~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~---------  246 (303)
T 3hmm_A          176 KRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVC---------  246 (303)
T ss_dssp             GGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHT---------
T ss_pred             ccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccchHHHHHHHHh---------
Confidence            999999999764      356789999999999999999887754321100  0   00000000000000         


Q ss_pred             CCCchhhhcccCccchhccccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcC
Q 026540          136 GAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQH  202 (237)
Q Consensus       136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h  202 (237)
                               ...         .++   .++. .......+..+.+|+.+||+.||++|||+.|+++.
T Consensus       247 ---------~~~---------~rp---~~p~-~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~  291 (303)
T 3hmm_A          247 ---------EQK---------LRP---NIPN-RWQSCEALRVMAKIMRECWYANGAARLTALRIKKT  291 (303)
T ss_dssp             ---------TSC---------CCC---CCCG-GGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHH
T ss_pred             ---------ccc---------CCC---CCCc-cccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHH
Confidence                     000         000   0000 00122346778999999999999999999999863

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=99.98  E-value=1.7e-33  Score=233.80  Aligned_cols=164  Identities=9%  Similarity=0.009  Sum_probs=125.7

Q ss_pred             HHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcCcccCcCCCcccchHHhhh--cCCCchhhh
Q 026540            9 KRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILR--AGYSFSVDM   86 (237)
Q Consensus         9 ~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~PE~~~~--~~~~~~~di   86 (237)
                      ..++.|++.||.|+|..+++||||||+|||++.++.+||+|||++...........+++.|+|||++.+  ..++.++|+
T Consensus       197 ~~i~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~Di  276 (371)
T 3q60_A          197 HILTAQLIRLAANLQSKGLVHGHFTPDNLFIMPDGRLMLGDVSALWKVGTRGPASSVPVTYAPREFLNASTATFTHALNA  276 (371)
T ss_dssp             HHHHHHHHHHHHHHHHTTEEETTCSGGGEEECTTSCEEECCGGGEEETTCEEEGGGSCGGGCCHHHHTCSEEECCHHHHH
T ss_pred             HHHHHHHHHHHHHHHHCCCccCcCCHHHEEECCCCCEEEEecceeeecCCCccCccCCcCCcChhhccCCCCCcCccccH
Confidence            455699999999999999999999999999999999999999999877655445566799999999987  578999999


Q ss_pred             hhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCchhHHhhh
Q 026540           87 WSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVD  166 (237)
Q Consensus        87 ws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  166 (237)
                      ||+|++++++++|..||........                             ..+..........          ...
T Consensus       277 wSlG~il~elltg~~Pf~~~~~~~~-----------------------------~~~~~~~~~~~~~----------~~~  317 (371)
T 3q60_A          277 WQLGLSIYRVWCLFLPFGLVTPGIK-----------------------------GSWKRPSLRVPGT----------DSL  317 (371)
T ss_dssp             HHHHHHHHHHHHSSCSTTBCCTTCT-----------------------------TCCCBCCTTSCCC----------CSC
T ss_pred             HHHHHHHHHHHhCCCCCCCcCcccc-----------------------------cchhhhhhhhccc----------ccc
Confidence            9999999999999999976531100                             0000000000000          000


Q ss_pred             hcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccCC
Q 026540          167 KYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNST  211 (237)
Q Consensus       167 ~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~~  211 (237)
                      .......++..+.+||.+||+.||++|||+.|+++||||....+.
T Consensus       318 ~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~~  362 (371)
T 3q60_A          318 AFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMETPEFLQLQNE  362 (371)
T ss_dssp             CCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTTSHHHHHHHHH
T ss_pred             chhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCHHHHHHHHH
Confidence            011123457889999999999999999999999999999976543

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=99.98  E-value=6.3e-33  Score=226.11  Aligned_cols=164  Identities=22%  Similarity=0.308  Sum_probs=131.8

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCC--CCcEEEeecCcceecCc--CcccCcCCCcccchHHhhh
Q 026540            2 TIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGI--DMRCKVVDFGNACRANK--QFAEEIQTRQYRAPEVILR   77 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~--~~~~kl~dfg~~~~~~~--~~~~~~~~~~~~~PE~~~~   77 (237)
                      .+++.++..++.|++.||.|+|..+++||||||+||+++.  ++.+||+|||++.....  ......+++.|+|||++.+
T Consensus        98 ~~~~~~~~~i~~qi~~al~~lH~~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~  177 (321)
T 1tki_A           98 ELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQH  177 (321)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCEEEEEESCGGGSCHHHHTT
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCCccccccCChhhcCcHHhcC
Confidence            3688999999999999999999999999999999999987  78999999999976542  2334578999999999988


Q ss_pred             cCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccC
Q 026540           78 AGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKF  157 (237)
Q Consensus        78 ~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (237)
                      ..++.++|+||+|++++++++|..||.+.+      .......+......++...                         
T Consensus       178 ~~~~~~~DiwslG~il~~ll~g~~pf~~~~------~~~~~~~i~~~~~~~~~~~-------------------------  226 (321)
T 1tki_A          178 DVVSTATDMWSLGTLVYVLLSGINPFLAET------NQQIIENIMNAEYTFDEEA-------------------------  226 (321)
T ss_dssp             CEECHHHHHHHHHHHHHHHHHSSCTTCCSS------HHHHHHHHHHTCCCCCHHH-------------------------
T ss_pred             CCCCchhhHHHHHHHHHHHHhCCCCCcCCC------HHHHHHHHHcCCCCCChhh-------------------------
Confidence            888999999999999999999999997653      3333333222111111100                         


Q ss_pred             CchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCccc
Q 026540          158 WSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRN  209 (237)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~  209 (237)
                                   ....+.++.+|+.+||+.||.+|||+.|+|+||||....
T Consensus       227 -------------~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~hp~~~~~~  265 (321)
T 1tki_A          227 -------------FKEISIEAMDFVDRLLVKERKSRMTASEALQHPWLKQKI  265 (321)
T ss_dssp             -------------HTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHSCG
T ss_pred             -------------hccCCHHHHHHHHHHcCCChhHCcCHHHHhcChhhccCc
Confidence                         012467889999999999999999999999999998653

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=99.98  E-value=2e-32  Score=225.54  Aligned_cols=195  Identities=26%  Similarity=0.346  Sum_probs=143.4

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC-------------cccCcCCCcc
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ-------------FAEEIQTRQY   69 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~-------------~~~~~~~~~~   69 (237)
                      +++.++..++.|++.||.|+|..+++||||||+||+++.++.++|+|||++......             .....|++.|
T Consensus       109 ~~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~y  188 (353)
T 2b9h_A          109 LSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWY  188 (353)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECC----------------CCCCCCGGG
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEcCCCcEEEEecccccccccccccccCccccccchhhccccccc
Confidence            678899999999999999999999999999999999999999999999998654321             1234678999


Q ss_pred             cchHHhhh-cCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCc
Q 026540           70 RAPEVILR-AGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGD  148 (237)
Q Consensus        70 ~~PE~~~~-~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (237)
                      +|||++.. ..++.++|+||+|++++++++|..||.+.      .....+..+....+.++.................  
T Consensus       189 ~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  260 (353)
T 2b9h_A          189 RAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGR------DYRHQLLLIFGIIGTPHSDNDLRCIESPRAREYI--  260 (353)
T ss_dssp             CCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCS------SHHHHHHHHHHHHCCCCSTTTTTTCCCHHHHHHH--
T ss_pred             cCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCC------CcHHHHHHHHHHhCCCchhccccccccchhhHHh--
Confidence            99999876 56899999999999999999999999876      3667777777777766532211111110000000  


Q ss_pred             cchhccccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccCCcc
Q 026540          149 LKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNSTRD  213 (237)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~~~~  213 (237)
                       .........+...       .....+..+.+||.+||+.||.+|||++|+++||||........
T Consensus       261 -~~~~~~~~~~~~~-------~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~~~~  317 (353)
T 2b9h_A          261 -KSLPMYPAAPLEK-------MFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQTYHDPND  317 (353)
T ss_dssp             -HTSCCCCCCCHHH-------HSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTTCCTTS
T ss_pred             -hcccCCCCcchhh-------hcccCCHHHHHHHHHhcCcCcccCCCHHHHhcCccccccCCccc
Confidence             0000000001111       12245678899999999999999999999999999997765443

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=99.98  E-value=1.7e-32  Score=224.09  Aligned_cols=160  Identities=20%  Similarity=0.236  Sum_probs=129.8

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecC---cCcccCcCCCcccchHHhhhcC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRAN---KQFAEEIQTRQYRAPEVILRAG   79 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~---~~~~~~~~~~~~~~PE~~~~~~   79 (237)
                      +++..+..++.|++.||.|+|..+++||||||+|||++.++.+||+|||++....   .......|++.|+|||++.+..
T Consensus       118 ~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~  197 (327)
T 3a62_A          118 FMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEILMRSG  197 (327)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTSCEEECCCSCC----------CTTSSCCTTSCHHHHTTSC
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCEEcccCCHHHeEECCCCcEEEEeCCcccccccCCccccccCCCcCccCHhhCcCCC
Confidence            5688899999999999999999999999999999999999999999999986432   2233457899999999999888


Q ss_pred             CCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCc
Q 026540           80 YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWS  159 (237)
Q Consensus        80 ~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (237)
                      ++.++|+||+|++++++++|..||.+..      .......+..                                    
T Consensus       198 ~~~~~DiwslG~il~el~~g~~pf~~~~------~~~~~~~i~~------------------------------------  235 (327)
T 3a62_A          198 HNRAVDWWSLGALMYDMLTGAPPFTGEN------RKKTIDKILK------------------------------------  235 (327)
T ss_dssp             CCTHHHHHHHHHHHHHHHHSSCSCCCSS------HHHHHHHHHH------------------------------------
T ss_pred             CCCcccchhHHHHHHHHHHCCCCCCCCC------HHHHHHHHHh------------------------------------
Confidence            9999999999999999999999997652      2222222211                                    


Q ss_pred             hhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCC-----CHHHHhcCCCcCcccC
Q 026540          160 LDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRP-----TAQQCLQHPWLSLRNS  210 (237)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~-----t~~ell~hp~f~~~~~  210 (237)
                            .....+...+..+.+||.+||+.||.+||     +++|+++||||...++
T Consensus       236 ------~~~~~p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~hp~f~~~~~  285 (327)
T 3a62_A          236 ------CKLNLPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFRHINW  285 (327)
T ss_dssp             ------TCCCCCTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHSGGGSSCCH
T ss_pred             ------CCCCCCCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHcCCcccCCCH
Confidence                  11223444578899999999999999999     8999999999997754

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=99.98  E-value=2.9e-32  Score=227.35  Aligned_cols=166  Identities=24%  Similarity=0.326  Sum_probs=132.3

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCC--CCcEEEeecCcceecCcC--cccCcCCCcccchHHhhh
Q 026540            2 TIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGI--DMRCKVVDFGNACRANKQ--FAEEIQTRQYRAPEVILR   77 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~--~~~~kl~dfg~~~~~~~~--~~~~~~~~~~~~PE~~~~   77 (237)
                      .+++.++..++.|++.||.|+|..+++||||||+|||++.  ++.+||+|||++......  .....+++.|+|||++.+
T Consensus       145 ~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~  224 (387)
T 1kob_A          145 KMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDR  224 (387)
T ss_dssp             CBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSCEEEECSSGGGCCHHHHTT
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCeeecccchHHeEEecCCCCceEEEecccceecCCCcceeeeccCCCccCchhccC
Confidence            4689999999999999999999999999999999999974  478999999999765432  334578999999999998


Q ss_pred             cCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccC
Q 026540           78 AGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKF  157 (237)
Q Consensus        78 ~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (237)
                      ..++.++|+||+|++++++++|..||.+..      ....+..+.......+                            
T Consensus       225 ~~~~~~~DiwSlG~il~elltg~~Pf~~~~------~~~~~~~i~~~~~~~~----------------------------  270 (387)
T 1kob_A          225 EPVGFYTDMWAIGVLGYVLLSGLSPFAGED------DLETLQNVKRCDWEFD----------------------------  270 (387)
T ss_dssp             CCBCHHHHHHHHHHHHHHHHHSCCSSCCSS------HHHHHHHHHHCCCCCC----------------------------
T ss_pred             CCCCCcccEeeHhHHHHHHHhCCCCCCCCC------HHHHHHHHHhCCCCCC----------------------------
Confidence            889999999999999999999999997652      3333322211100000                            


Q ss_pred             CchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccCC
Q 026540          158 WSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNST  211 (237)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~~  211 (237)
                                .......+.++.+||.+||+.||.+|||++|+++||||.+....
T Consensus       271 ----------~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~~  314 (387)
T 1kob_A          271 ----------EDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHPWLKGDHSN  314 (387)
T ss_dssp             ----------SSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTSTTTSSCCTT
T ss_pred             ----------ccccccCCHHHHHHHHHHcCCChhHCcCHHHHhhCccccCCccc
Confidence                      01122346788999999999999999999999999999976543

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=99.97  E-value=1.2e-32  Score=230.68  Aligned_cols=168  Identities=23%  Similarity=0.274  Sum_probs=126.3

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCC---CCcEEEeecCcceecCc--CcccCcCCCcccchHHhhh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGI---DMRCKVVDFGNACRANK--QFAEEIQTRQYRAPEVILR   77 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~---~~~~kl~dfg~~~~~~~--~~~~~~~~~~~~~PE~~~~   77 (237)
                      +++.++..++.|++.||.|+|..+++||||||+|||++.   ++.+||+|||++.....  ......|++.|+|||++.+
T Consensus       158 l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~  237 (400)
T 1nxk_A          158 FTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGP  237 (400)
T ss_dssp             CBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSTTCCEEECCCTTCEECC-----------CTTCCGGGSCC
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCccccCcCcceEEEecCCCCccEEEEecccccccCCCCccccCCCCCCccCHhhcCC
Confidence            789999999999999999999999999999999999987   78999999999976542  2345678999999999988


Q ss_pred             cCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccC
Q 026540           78 AGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKF  157 (237)
Q Consensus        78 ~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (237)
                      ..++.++|+||+||+++++++|..||.+.........  ....+..  +...                            
T Consensus       238 ~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~--~~~~i~~--~~~~----------------------------  285 (400)
T 1nxk_A          238 EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPG--MKTRIRM--GQYE----------------------------  285 (400)
T ss_dssp             CCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCS--HHHHHHH--TCCC----------------------------
T ss_pred             CCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHH--HHHHHHc--Cccc----------------------------
Confidence            8899999999999999999999999976542211100  0000000  0000                            


Q ss_pred             CchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccC
Q 026540          158 WSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNS  210 (237)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~  210 (237)
                      .        .......++.++.+||.+||+.||.+|||++|+++||||.....
T Consensus       286 ~--------~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp~~~~~~~  330 (400)
T 1nxk_A          286 F--------PNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTK  330 (400)
T ss_dssp             C--------CTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHTTTT
T ss_pred             C--------CCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCccccCCCC
Confidence            0        00011235678999999999999999999999999999986543

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=99.97  E-value=8.2e-33  Score=220.84  Aligned_cols=163  Identities=21%  Similarity=0.337  Sum_probs=131.1

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCc-CcccCcCCCcccchHHhhhcCCC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK-QFAEEIQTRQYRAPEVILRAGYS   81 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~-~~~~~~~~~~~~~PE~~~~~~~~   81 (237)
                      +++.++..++.|++.+|.|+|..+++|+||||+||+++.++.++|+|||++..... ......+++.|+|||.+.+..++
T Consensus       106 ~~~~~~~~~~~qi~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  185 (279)
T 3fdn_A          106 FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHD  185 (279)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHTTTCEECCCCGGGEEECTTSCEEECSCCEESCC--------CCCCTTCCHHHHTTCCCC
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCEecccCChHhEEEcCCCCEEEEeccccccCCcccccccCCCCCccCHhHhccCCCC
Confidence            57889999999999999999999999999999999999999999999998754432 23445778999999999888899


Q ss_pred             chhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCchh
Q 026540           82 FSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLD  161 (237)
Q Consensus        82 ~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (237)
                      .++|+||+|++++++++|..||....      .......+..                                      
T Consensus       186 ~~~Di~slG~il~~l~~g~~p~~~~~------~~~~~~~~~~--------------------------------------  221 (279)
T 3fdn_A          186 EKVDLWSLGVLCYEFLVGKPPFEANT------YQETYKRISR--------------------------------------  221 (279)
T ss_dssp             TTHHHHHHHHHHHHHHHSSCTTCCSS------HHHHHHHHHH--------------------------------------
T ss_pred             ccchhHhHHHHHHHHHHCCCCCCCCc------HHHHHHHHHh--------------------------------------
Confidence            99999999999999999999997542      2222222111                                      


Q ss_pred             HHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccCCcc
Q 026540          162 RLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNSTRD  213 (237)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~~~~  213 (237)
                          .....+...+..+.+||.+||+.||.+|||++|+++||||+.....+.
T Consensus       222 ----~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h~~~~~~~~~~~  269 (279)
T 3fdn_A          222 ----VEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKPS  269 (279)
T ss_dssp             ----TCCCCCTTSCHHHHHHHHHHCCSSGGGSCCHHHHHHCHHHHHHCSSCC
T ss_pred             ----CCCCCCCcCCHHHHHHHHHHhccChhhCCCHHHHhhCccccCCccCcc
Confidence                112234445678899999999999999999999999999998765544

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=99.97  E-value=2.7e-32  Score=227.79  Aligned_cols=201  Identities=16%  Similarity=0.173  Sum_probs=127.1

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecC----------cCcccCcCCCcccc
Q 026540            2 TIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRAN----------KQFAEEIQTRQYRA   71 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~----------~~~~~~~~~~~~~~   71 (237)
                      ++++.++..++.|++.||.|+|..+++||||||+|||++.++.+||+|||.+....          .......|++.|+|
T Consensus       124 ~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a  203 (389)
T 3gni_B          124 GMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLS  203 (389)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCGGGCEECEETTEECSCBCCCCTTCTTTGGGSC
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEcccccceeeccccccccccccccccccccccccC
Confidence            36788999999999999999999999999999999999999999999999875321          11223477889999


Q ss_pred             hHHhhh--cCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhh------
Q 026540           72 PEVILR--AGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYF------  143 (237)
Q Consensus        72 PE~~~~--~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------  143 (237)
                      ||++.+  ..++.++|+||+||+++++++|..||.+....      ..+....  .+..+..............      
T Consensus       204 PE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~------~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~  275 (389)
T 3gni_B          204 PEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPAT------QMLLEKL--NGTVPCLLDTSTIPAEELTMSPSRS  275 (389)
T ss_dssp             HHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCST------THHHHC----------------------------
T ss_pred             HHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHH------HHHHHHh--cCCCCcccccccccccccccccccc
Confidence            999987  56899999999999999999999999765411      1111111  0111111000000000000      


Q ss_pred             -cccCccchhccccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccCC
Q 026540          144 -DRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNST  211 (237)
Q Consensus       144 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~~  211 (237)
                       ...............+.. ........+...+..+.+||.+||+.||++|||++|+|+||||+.....
T Consensus       276 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~hp~f~~~~~~  343 (389)
T 3gni_B          276 VANSGLSDSLTTSTPRPSN-GDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQIKRR  343 (389)
T ss_dssp             -------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTSGGGGGC---
T ss_pred             ccccccccccccCcccccc-CCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcCHHHHHHhhc
Confidence             000000000000000000 0001112345567889999999999999999999999999999987643

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=99.97  E-value=3.4e-32  Score=222.22  Aligned_cols=167  Identities=23%  Similarity=0.306  Sum_probs=132.0

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCC---CCcEEEeecCcceecCcC--cccCcCCCcccchHHhhh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGI---DMRCKVVDFGNACRANKQ--FAEEIQTRQYRAPEVILR   77 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~---~~~~kl~dfg~~~~~~~~--~~~~~~~~~~~~PE~~~~   77 (237)
                      +++.++..++.|++.||.|+|..+++||||||+||+++.   ++.++|+|||++......  .....+++.|+|||++.+
T Consensus       128 ~~~~~~~~i~~ql~~~L~~LH~~givH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~  207 (327)
T 3lm5_A          128 VSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREIMGTPEYLAPEILNY  207 (327)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESCBTTBCCEEECCGGGCEEC---------CCCGGGCCHHHHTT
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCeecCcCChHHEEEecCCCCCcEEEeeCccccccCCccccccccCCcCccCCeeecC
Confidence            678899999999999999999999999999999999987   789999999999765432  334578999999999998


Q ss_pred             cCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccC
Q 026540           78 AGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKF  157 (237)
Q Consensus        78 ~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (237)
                      ..++.++|+||+|++++++++|..||....      .......+.......+                            
T Consensus       208 ~~~~~~~DiwslG~il~~ll~g~~pf~~~~------~~~~~~~i~~~~~~~~----------------------------  253 (327)
T 3lm5_A          208 DPITTATDMWNIGIIAYMLLTHTSPFVGED------NQETYLNISQVNVDYS----------------------------  253 (327)
T ss_dssp             CCCCTHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHTCCCCC----------------------------
T ss_pred             CCCCchhhHHHHHHHHHHHHhCCCCCCCCC------chHHHHHHHhcccccC----------------------------
Confidence            889999999999999999999999997653      3333322222111110                            


Q ss_pred             CchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccCCcc
Q 026540          158 WSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNSTRD  213 (237)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~~~~  213 (237)
                                .......+..+.+||.+||+.||.+|||++|+|+||||+.++....
T Consensus       254 ----------~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h~~~~~~~~~~~  299 (327)
T 3lm5_A          254 ----------EETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSHSWLQQWDFENL  299 (327)
T ss_dssp             ----------TTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTCGGGCCCCTTCC
T ss_pred             ----------chhhcccCHHHHHHHHHHcCCChhhCcCHHHHhCCHhhcccccccc
Confidence                      0112234677899999999999999999999999999998876544

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=99.97  E-value=1.7e-32  Score=226.97  Aligned_cols=162  Identities=25%  Similarity=0.297  Sum_probs=128.9

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCC---CcEEEeecCcceecCc--CcccCcCCCcccchHHhhh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGID---MRCKVVDFGNACRANK--QFAEEIQTRQYRAPEVILR   77 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~---~~~kl~dfg~~~~~~~--~~~~~~~~~~~~~PE~~~~   77 (237)
                      +++.++..++.|++.||.|+|..+++||||||+|||++.+   +.+||+|||++.....  ......|++.|+|||++.+
T Consensus       125 ~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~~~~  204 (362)
T 2bdw_A          125 YSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKK  204 (362)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTTCCSCCCSCSCTTTCCHHHHTT
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEeecCcceEecCCcccccCCCCccccCHHHHcc
Confidence            5789999999999999999999999999999999999764   4599999999876543  2334678999999999998


Q ss_pred             cCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccC
Q 026540           78 AGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKF  157 (237)
Q Consensus        78 ~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (237)
                      ..++.++|+||+|+++|++++|..||.+..      .......+.......+.                           
T Consensus       205 ~~~~~~~DiwslG~il~~ll~g~~Pf~~~~------~~~~~~~i~~~~~~~~~---------------------------  251 (362)
T 2bdw_A          205 DPYSKPVDIWACGVILYILLVGYPPFWDED------QHRLYAQIKAGAYDYPS---------------------------  251 (362)
T ss_dssp             CCCCTHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHTCCCCCT---------------------------
T ss_pred             CCCCchhhHHHHHHHHHHHHHCCCCCCCCC------HHHHHHHHHhCCCCCCc---------------------------
Confidence            889999999999999999999999997652      22222222111000000                           


Q ss_pred             CchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcc
Q 026540          158 WSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLR  208 (237)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~  208 (237)
                                 ......+..+.+||.+||+.||.+|||+.|+|+||||...
T Consensus       252 -----------~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~  291 (362)
T 2bdw_A          252 -----------PEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWICNR  291 (362)
T ss_dssp             -----------TGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTSHHHHTH
T ss_pred             -----------ccccCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcccCCC
Confidence                       0012346788999999999999999999999999999754

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=99.97  E-value=1.4e-32  Score=228.79  Aligned_cols=166  Identities=23%  Similarity=0.303  Sum_probs=133.9

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecC--cCcccCcCCCcccchHHhhh--
Q 026540            2 TIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRAN--KQFAEEIQTRQYRAPEVILR--   77 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~--~~~~~~~~~~~~~~PE~~~~--   77 (237)
                      .+++.++..++.|++.||.|+|..+++||||||+|||++.++.++|+|||++....  .......||+.|+|||++..  
T Consensus       111 ~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~~gt~~Y~aPE~~~~~~  190 (384)
T 4fr4_A          111 HFKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQITTMAGTKPYMAPEMFSSRK  190 (384)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTCCBCCCCSCGGGCCGGGTCCCS
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEECCCCCEEEeccceeeeccCCCceeccCCCccccCCeeeccCC
Confidence            36789999999999999999999999999999999999999999999999997653  33456688999999999974  


Q ss_pred             -cCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcccc
Q 026540           78 -AGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLK  156 (237)
Q Consensus        78 -~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (237)
                       ..++.++|+||+||++|+|++|..||......   .......                                     
T Consensus       191 ~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~---~~~~~~~-------------------------------------  230 (384)
T 4fr4_A          191 GAGYSFAVDWWSLGVTAYELLRGRRPYHIRSST---SSKEIVH-------------------------------------  230 (384)
T ss_dssp             SCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTS---CHHHHHH-------------------------------------
T ss_pred             CCCCCccceeechHHHHHHHHhCCCCCCCCCCc---cHHHHHH-------------------------------------
Confidence             35889999999999999999999999755311   1111111                                     


Q ss_pred             CCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCC-HHHHhcCCCcCcccCCc
Q 026540          157 FWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPT-AQQCLQHPWLSLRNSTR  212 (237)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t-~~ell~hp~f~~~~~~~  212 (237)
                           .........+...+..+.+||.+||+.||.+||+ ++++++||||...++..
T Consensus       231 -----~~~~~~~~~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~hp~f~~~~w~~  282 (384)
T 4fr4_A          231 -----TFETTVVTYPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQNFPYMNDINWDA  282 (384)
T ss_dssp             -----HHHHCCCCCCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHTSGGGTTCCHHH
T ss_pred             -----HHhhcccCCCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHcChhhhcCCHHH
Confidence                 0111122334456788999999999999999998 99999999999876543

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=99.97  E-value=5.3e-32  Score=216.51  Aligned_cols=173  Identities=23%  Similarity=0.288  Sum_probs=134.6

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCc---EEEeecCcceecCcC--cccCcCCCcccchHHhhh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMR---CKVVDFGNACRANKQ--FAEEIQTRQYRAPEVILR   77 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~---~kl~dfg~~~~~~~~--~~~~~~~~~~~~PE~~~~   77 (237)
                      +++.++..++.|++.||.|+|..+++|+||||+||+++.++.   ++|+|||++......  .....+++.|+|||.+.+
T Consensus       102 ~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~  181 (284)
T 3kk8_A          102 YSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKK  181 (284)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCSSCBCCCSCSCGGGCCHHHHTT
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcccCccccCCCCCcCCcCchhhcC
Confidence            578899999999999999999999999999999999976554   999999998665432  234578999999999998


Q ss_pred             cCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccC
Q 026540           78 AGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKF  157 (237)
Q Consensus        78 ~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (237)
                      ..++.++|+||+|++++++++|..||.+..      .......+.......+                            
T Consensus       182 ~~~~~~~Di~slG~~l~~l~~g~~pf~~~~------~~~~~~~~~~~~~~~~----------------------------  227 (284)
T 3kk8_A          182 DPYSKPVDIWACGVILYILLVGYPPFWDED------QHRLYAQIKAGAYDYP----------------------------  227 (284)
T ss_dssp             CCBCTHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHTCCCCC----------------------------
T ss_pred             CCCCcccchHHHHHHHHHHHHCCCCCCCCc------hhHHHHHHHhccccCC----------------------------
Confidence            889999999999999999999999997652      2222222211100000                            


Q ss_pred             CchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccCCcccccccc
Q 026540          158 WSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNSTRDETKNKS  219 (237)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~~~~~~~~~~  219 (237)
                                .......++.+.+|+.+||+.||.+|||++|+++||||...........++.
T Consensus       228 ----------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~~~~~~~~~~~  279 (284)
T 3kk8_A          228 ----------SPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWICNRERVASAIHRQD  279 (284)
T ss_dssp             ----------TTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTTSHHHHSCCCGGGSCCCCC
T ss_pred             ----------chhhcccCHHHHHHHHHHcccChhhCCCHHHHhcCccccCChhHHhHhhcCC
Confidence                      0011234678899999999999999999999999999997765555444433

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=99.97  E-value=6.3e-32  Score=220.15  Aligned_cols=163  Identities=25%  Similarity=0.343  Sum_probs=131.1

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC---cccCcCCCcccchHHhhhc
Q 026540            2 TIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ---FAEEIQTRQYRAPEVILRA   78 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~~~~PE~~~~~   78 (237)
                      .+++.++..++.|++.||.|+|..+++||||||+||+++.++.+||+|||++......   .....|++.|+|||++.+.
T Consensus       137 ~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  216 (321)
T 2c30_A          137 RLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRS  216 (321)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCBCCCCSCGGGCCHHHHTTC
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCcEEEeeeeeeeecccCccccccccCCccccCHhhhcCC
Confidence            3678999999999999999999999999999999999999999999999998765432   3345789999999999888


Q ss_pred             CCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCC
Q 026540           79 GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFW  158 (237)
Q Consensus        79 ~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (237)
                      .++.++|+||+|++++++++|..||....      .......+...   .+.                            
T Consensus       217 ~~~~~~Dv~slG~il~el~~g~~pf~~~~------~~~~~~~~~~~---~~~----------------------------  259 (321)
T 2c30_A          217 LYATEVDIWSLGIMVIEMVDGEPPYFSDS------PVQAMKRLRDS---PPP----------------------------  259 (321)
T ss_dssp             CBCTHHHHHHHHHHHHHHHHSSCTTTTSC------HHHHHHHHHHS---SCC----------------------------
T ss_pred             CCCchhhHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHhcC---CCC----------------------------
Confidence            89999999999999999999999997552      22222211110   000                            


Q ss_pred             chhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCccc
Q 026540          159 SLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRN  209 (237)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~  209 (237)
                              ........+..+.+|+.+||+.||++|||++|+++||||....
T Consensus       260 --------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp~~~~~~  302 (321)
T 2c30_A          260 --------KLKNSHKVSPVLRDFLERMLVRDPQERATAQELLDHPFLLQTG  302 (321)
T ss_dssp             --------CCTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGGGCC
T ss_pred             --------CcCccccCCHHHHHHHHHHccCChhhCcCHHHHhcChhhccCC
Confidence                    0011223467789999999999999999999999999998654

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=99.97  E-value=5.2e-32  Score=223.27  Aligned_cols=162  Identities=22%  Similarity=0.277  Sum_probs=128.5

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCC---cEEEeecCcceecCcC---cccCcCCCcccchHHhh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDM---RCKVVDFGNACRANKQ---FAEEIQTRQYRAPEVIL   76 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~---~~kl~dfg~~~~~~~~---~~~~~~~~~~~~PE~~~   76 (237)
                      +++..+..++.|++.||.|+|..+++||||||+|||++.++   .+||+|||++......   .....|++.|+|||++.
T Consensus       127 ~~~~~~~~i~~qi~~al~~lH~~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~  206 (351)
T 3c0i_A          127 YSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVVK  206 (351)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECSSSTTCCEEECCCTTCEECCTTSCBCCCCCSCGGGCCHHHHT
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCceeccCChHHeEEecCCCCCcEEEecCcceeEecCCCeeecCCcCCcCccCHHHHc
Confidence            67889999999999999999999999999999999998655   4999999999765432   33457899999999999


Q ss_pred             hcCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcccc
Q 026540           77 RAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLK  156 (237)
Q Consensus        77 ~~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (237)
                      +..++.++|+||+|++++++++|..||.+.       .......+.......+...                        
T Consensus       207 ~~~~~~~~DiwslG~il~~ll~g~~pf~~~-------~~~~~~~i~~~~~~~~~~~------------------------  255 (351)
T 3c0i_A          207 REPYGKPVDVWGCGVILFILLSGCLPFYGT-------KERLFEGIIKGKYKMNPRQ------------------------  255 (351)
T ss_dssp             TCCBCTHHHHHHHHHHHHHHHHSSCSSCSS-------HHHHHHHHHHTCCCCCHHH------------------------
T ss_pred             CCCCCchHhhHHHHHHHHHHHHCCCCCCCc-------HHHHHHHHHcCCCCCCccc------------------------
Confidence            888999999999999999999999999753       2222222111100000000                        


Q ss_pred             CCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCccc
Q 026540          157 FWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRN  209 (237)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~  209 (237)
                                    ....+..+.+||.+||+.||.+|||+.|+++||||....
T Consensus       256 --------------~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~hp~~~~~~  294 (351)
T 3c0i_A          256 --------------WSHISESAKDLVRRMLMLDPAERITVYEALNHPWLKERD  294 (351)
T ss_dssp             --------------HTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHTHH
T ss_pred             --------------cccCCHHHHHHHHHHCCCChhHCcCHHHHhcChhhcCCc
Confidence                          012367889999999999999999999999999998653

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=99.97  E-value=5.2e-32  Score=223.08  Aligned_cols=166  Identities=22%  Similarity=0.283  Sum_probs=123.4

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCC---CCcEEEeecCcceecCc--CcccCcCCCcccchHHhhh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGI---DMRCKVVDFGNACRANK--QFAEEIQTRQYRAPEVILR   77 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~---~~~~kl~dfg~~~~~~~--~~~~~~~~~~~~~PE~~~~   77 (237)
                      +++.++..++.|++.||.|+|..+++||||||+||+++.   ++.+||+|||++.....  ......|++.|+|||++.+
T Consensus       145 ~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~  224 (349)
T 2w4o_A          145 YSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTPGYCAPEILRG  224 (349)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESSSSTTCCEEECCCC----------------CGGGSCHHHHTT
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCeEecCCCcccEEEecCCCCCCEEEccCccccccCcccccccccCCCCccCHHHhcC
Confidence            578899999999999999999999999999999999975   78999999999865432  2334578999999999998


Q ss_pred             cCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccC
Q 026540           78 AGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKF  157 (237)
Q Consensus        78 ~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (237)
                      ..++.++|+||+|++++++++|..||....     ........+.......                             
T Consensus       225 ~~~~~~~DiwslG~il~ell~g~~pf~~~~-----~~~~~~~~i~~~~~~~-----------------------------  270 (349)
T 2w4o_A          225 CAYGPEVDMWSVGIITYILLCGFEPFYDER-----GDQFMFRRILNCEYYF-----------------------------  270 (349)
T ss_dssp             CCCCTHHHHHHHHHHHHHHHHSSCTTCCTT-----CHHHHHHHHHTTCCCC-----------------------------
T ss_pred             CCCCcccchHHHHHHHHHHHhCCCCCCCCc-----ccHHHHHHHHhCCCcc-----------------------------
Confidence            889999999999999999999999997553     1111222111100000                             


Q ss_pred             CchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccCC
Q 026540          158 WSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNST  211 (237)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~~  211 (237)
                               ........+..+.+||.+||+.||++|||+.|+++||||.+....
T Consensus       271 ---------~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~~~~  315 (349)
T 2w4o_A          271 ---------ISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQHPWVTGKAAN  315 (349)
T ss_dssp             ---------CTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSTTTTSTTCC
T ss_pred             ---------CCchhhhCCHHHHHHHHHHccCChhhCcCHHHHhcCcccCCCccc
Confidence                     000122346788999999999999999999999999999977643

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=99.97  E-value=3.6e-32  Score=222.83  Aligned_cols=153  Identities=22%  Similarity=0.295  Sum_probs=127.8

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCc--CcccCcCCCcccchHHhhhcCC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK--QFAEEIQTRQYRAPEVILRAGY   80 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~--~~~~~~~~~~~~~PE~~~~~~~   80 (237)
                      +++..+..++.|++.||.|+|..+++||||||+||+++.++.+||+|||++.....  ......|++.|+|||++.+..+
T Consensus       127 l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~  206 (335)
T 3dls_A          127 LDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYTFCGTIEYCAPEVLMGNPY  206 (335)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTCCBCEECSCGGGCCHHHHTTCCB
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCeEEeccCHHHEEEcCCCcEEEeecccceECCCCCceeccCCCccccChhhhcCCCC
Confidence            67889999999999999999999999999999999999999999999999976543  2334578999999999988876


Q ss_pred             -CchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCc
Q 026540           81 -SFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWS  159 (237)
Q Consensus        81 -~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (237)
                       +.++|+||+|++++++++|..||.....                                                   
T Consensus       207 ~~~~~DiwslG~il~el~~g~~pf~~~~~---------------------------------------------------  235 (335)
T 3dls_A          207 RGPELEMWSLGVTLYTLVFEENPFCELEE---------------------------------------------------  235 (335)
T ss_dssp             CSHHHHHHHHHHHHHHHHHSSCSCSSGGG---------------------------------------------------
T ss_pred             CCCcccchhHHHHHHHHHhCCCchhhHHH---------------------------------------------------
Confidence             7889999999999999999999964310                                                   


Q ss_pred             hhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCccc
Q 026540          160 LDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRN  209 (237)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~  209 (237)
                         ........+...+..+.+||.+||+.||.+|||++++++||||....
T Consensus       236 ---~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~ell~hp~~~~~~  282 (335)
T 3dls_A          236 ---TVEAAIHPPYLVSKELMSLVSGLLQPVPERRTTLEKLVTDPWVTQPV  282 (335)
T ss_dssp             ---GTTTCCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHHCTTTTCCC
T ss_pred             ---HHhhccCCCcccCHHHHHHHHHHccCChhhCcCHHHHhcCccccCCc
Confidence               00001111223467899999999999999999999999999998643

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=99.97  E-value=9.1e-33  Score=232.45  Aligned_cols=154  Identities=13%  Similarity=0.148  Sum_probs=127.1

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcCcccCcCCCcccchHHhh------
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVIL------   76 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~PE~~~------   76 (237)
                      +++..+..++.|++.||.|+|+.+++||||||+|||++.++.+||+|||++...........| +.|+|||++.      
T Consensus       208 l~~~~~~~i~~qi~~aL~~LH~~~iiHrDiKp~NILl~~~~~~kL~DFG~a~~~~~~~~~~~g-~~y~aPE~~~~~~~~~  286 (413)
T 3dzo_A          208 LVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGASAVSPIG-RGFAPPETTAERMLPF  286 (413)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCGGGCEETTEEECCCCC-TTTCCHHHHHHHTSTT
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCcccCCcccceEEEecCCeEEEEeccceeecCCccccCCC-CceeCchhhhcccccc
Confidence            567788899999999999999999999999999999999999999999999877766666777 9999999994      


Q ss_pred             ----hcCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchh
Q 026540           77 ----RAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRI  152 (237)
Q Consensus        77 ----~~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (237)
                          ...++.++|+||+||+++++++|+.||........                                         
T Consensus       287 ~~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~-----------------------------------------  325 (413)
T 3dzo_A          287 GQHHPTLMTFAFDTWTLGLAIYWIWCADLPNTDDAALGG-----------------------------------------  325 (413)
T ss_dssp             GGGCCEEECHHHHHHHHHHHHHHHHHSSCCCCTTGGGSC-----------------------------------------
T ss_pred             ccccCcCCCchhhHHHHHHHHHHHHHCCCCCCCcchhhh-----------------------------------------
Confidence                33477899999999999999999999975421000                                         


Q ss_pred             ccccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCccc
Q 026540          153 RRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRN  209 (237)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~  209 (237)
                             .....    .....++..+.+||.+||+.||.+|||+.++++||||....
T Consensus       326 -------~~~~~----~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~~l~~~~~~~~~  371 (413)
T 3dzo_A          326 -------SEWIF----RSCKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQLR  371 (413)
T ss_dssp             -------SGGGG----SSCCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHHH
T ss_pred             -------HHHHH----hhcccCCHHHHHHHHHHccCChhhCcCHHHHHhCHHHHHHH
Confidence                   00000    01113457899999999999999999999999999998664

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=99.97  E-value=8.2e-32  Score=226.18  Aligned_cols=167  Identities=19%  Similarity=0.213  Sum_probs=131.4

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC----cccCcCCCcccchHHhhh-
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ----FAEEIQTRQYRAPEVILR-   77 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~----~~~~~~~~~~~~PE~~~~-   77 (237)
                      +++..+..++.|++.||.|+|..+++||||||+|||++.++.+||+|||++......    ....+||+.|+|||++.. 
T Consensus       159 l~~~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILld~~g~vkL~DFGla~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~  238 (412)
T 2vd5_A          159 IPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAV  238 (412)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSCEECSSCCSCGGGCCHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCeeecccCHHHeeecCCCCEEEeechhheeccCCCccccceeccccCcCCHHHHhhc
Confidence            678899999999999999999999999999999999999999999999999765432    224578999999999983 


Q ss_pred             ------cCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccch
Q 026540           78 ------AGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKR  151 (237)
Q Consensus        78 ------~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (237)
                            ..++.++|+||+||++++|++|..||.+.+      .......+.......                       
T Consensus       239 ~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~------~~~~~~~i~~~~~~~-----------------------  289 (412)
T 2vd5_A          239 GGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADS------TAETYGKIVHYKEHL-----------------------  289 (412)
T ss_dssp             HTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSS------HHHHHHHHHTHHHHC-----------------------
T ss_pred             ccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCC------HHHHHHHHHhcccCc-----------------------
Confidence                  458899999999999999999999997653      333333332110000                       


Q ss_pred             hccccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCC---CCHHHHhcCCCcCcccCCcc
Q 026540          152 IRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKR---PTAQQCLQHPWLSLRNSTRD  213 (237)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R---~t~~ell~hp~f~~~~~~~~  213 (237)
                                    .....+..++.++.+||.+||. +|.+|   ++++|+++||||++.++...
T Consensus       290 --------------~~p~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~Hpff~~i~w~~l  339 (412)
T 2vd5_A          290 --------------SLPLVDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTHPFFFGLDWDGL  339 (412)
T ss_dssp             --------------CCC----CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTSGGGTTCCSTTS
T ss_pred             --------------CCCccccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcCCCcCCCCHHHH
Confidence                          0000123457889999999999 99998   49999999999998776543

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=99.97  E-value=1e-31  Score=219.13  Aligned_cols=163  Identities=19%  Similarity=0.161  Sum_probs=128.7

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecC-----cCcccCcCCCcccchHHhh
Q 026540            2 TIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRAN-----KQFAEEIQTRQYRAPEVIL   76 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~-----~~~~~~~~~~~~~~PE~~~   76 (237)
                      .+++.++..++.|++.||.|+|..+++||||||+||+++.++.+||+|||++....     .......|++.|+|||++.
T Consensus       101 ~~~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~  180 (323)
T 3tki_A          101 GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK  180 (323)
T ss_dssp             BCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEECCBCSCCSCGGGSCHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCccccccchHHEEEeCCCCEEEEEeeccceeccCCcccccCCCccCcCccCcHHhc
Confidence            46789999999999999999999999999999999999999999999999986543     1233557899999999998


Q ss_pred             hcCC-CchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccc
Q 026540           77 RAGY-SFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRL  155 (237)
Q Consensus        77 ~~~~-~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (237)
                      +..+ +.++|+||+|++++++++|..||......     ...........                              
T Consensus       181 ~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-----~~~~~~~~~~~------------------------------  225 (323)
T 3tki_A          181 RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDS-----CQEYSDWKEKK------------------------------  225 (323)
T ss_dssp             CSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTT-----SHHHHHHHTTC------------------------------
T ss_pred             cCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchH-----HHHHHHHhccc------------------------------
Confidence            8775 77899999999999999999999765311     01110000000                              


Q ss_pred             cCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCccc
Q 026540          156 KFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRN  209 (237)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~  209 (237)
                                .........+..+.+||.+||+.||.+|||++|+++||||....
T Consensus       226 ----------~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h~~~~~~~  269 (323)
T 3tki_A          226 ----------TYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKPL  269 (323)
T ss_dssp             ----------TTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTTTTCCC
T ss_pred             ----------ccCCccccCCHHHHHHHHHHccCChhhCcCHHHHhhChhhcccc
Confidence                      00001123467788999999999999999999999999998653

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=99.97  E-value=1.2e-32  Score=223.50  Aligned_cols=155  Identities=23%  Similarity=0.264  Sum_probs=122.9

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC--cccCcCCCcccchHHhhhcCC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ--FAEEIQTRQYRAPEVILRAGY   80 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~--~~~~~~~~~~~~PE~~~~~~~   80 (237)
                      +++.++..++.|++.||.|+|..+++||||||+|||++.++.+||+|||++......  .....|++.|+|||++.+ .+
T Consensus       154 l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~  232 (311)
T 3p1a_A          154 LPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQEGDPRYMAPELLQG-SY  232 (311)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECGGGCEEECCCTTCEECC------CCCCCGGGCCGGGGGT-CC
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEEccceeeeecccCCCCcccCCCccccCHhHhcC-CC
Confidence            678899999999999999999999999999999999999999999999998765432  234568999999998875 78


Q ss_pred             CchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCch
Q 026540           81 SFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSL  160 (237)
Q Consensus        81 ~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (237)
                      +.++|+||+|++++++++|..++...         .....+..  +..+..                             
T Consensus       233 ~~~~DiwslG~il~el~~g~~~~~~~---------~~~~~~~~--~~~~~~-----------------------------  272 (311)
T 3p1a_A          233 GTAADVFSLGLTILEVACNMELPHGG---------EGWQQLRQ--GYLPPE-----------------------------  272 (311)
T ss_dssp             STHHHHHHHHHHHHHHHHTCCCCSSH---------HHHHHHTT--TCCCHH-----------------------------
T ss_pred             CchhhHHHHHHHHHHHHhCCCCCCCc---------cHHHHHhc--cCCCcc-----------------------------
Confidence            99999999999999999997666432         11111100  000000                             


Q ss_pred             hHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCc
Q 026540          161 DRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSL  207 (237)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~  207 (237)
                               .+...+..+.+||.+||+.||++|||++|+++||||++
T Consensus       273 ---------~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~~~~  310 (311)
T 3p1a_A          273 ---------FTAGLSSELRSVLVMMLEPDPKLRATAEALLALPVLRQ  310 (311)
T ss_dssp             ---------HHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGSC
T ss_pred             ---------cccCCCHHHHHHHHHHcCCChhhCcCHHHHHhCccccC
Confidence                     01234678999999999999999999999999999975

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=99.97  E-value=1.5e-31  Score=217.80  Aligned_cols=166  Identities=21%  Similarity=0.317  Sum_probs=132.5

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCC----cEEEeecCcceecCc--CcccCcCCCcccchHHhh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDM----RCKVVDFGNACRANK--QFAEEIQTRQYRAPEVIL   76 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~----~~kl~dfg~~~~~~~--~~~~~~~~~~~~~PE~~~   76 (237)
                      +++.++..++.|++.||.|+|..+++|+||||+||+++.++    .++|+|||++.....  ......+++.|+|||.+.
T Consensus       112 ~~~~~~~~i~~qi~~aL~~lH~~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~gt~~y~aPE~~~  191 (321)
T 2a2a_A          112 LSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVN  191 (321)
T ss_dssp             EEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCTTCEECCTTCCCCCCCSCGGGCCHHHHT
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCeecCCCChHHEEEecCCCCcCCEEEccCccceecCccccccccCCCCCccCccccc
Confidence            67889999999999999999999999999999999998877    799999999876543  234557899999999998


Q ss_pred             hcCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcccc
Q 026540           77 RAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLK  156 (237)
Q Consensus        77 ~~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (237)
                      +..++.++|+||+|++++++++|..||.+..      ....+..+.......+...                        
T Consensus       192 ~~~~~~~~Di~slG~il~~l~~g~~pf~~~~------~~~~~~~i~~~~~~~~~~~------------------------  241 (321)
T 2a2a_A          192 YEPLGLEADMWSIGVITYILLSGASPFLGDT------KQETLANITSVSYDFDEEF------------------------  241 (321)
T ss_dssp             TCCCCTHHHHHHHHHHHHHHHHSCCSSCCSS------HHHHHHHHHTTCCCCCHHH------------------------
T ss_pred             CCCCCCccccHHHHHHHHHHHHCCCCCCCCC------HHHHHHHHHhcccccChhh------------------------
Confidence            8889999999999999999999999997652      3333332221111111000                        


Q ss_pred             CCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccCCc
Q 026540          157 FWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNSTR  212 (237)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~~~  212 (237)
                                    ....+..+.+||.+||+.||.+|||++|+++||||.......
T Consensus       242 --------------~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~hp~~~~~~~~~  283 (321)
T 2a2a_A          242 --------------FSHTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPVDNQQ  283 (321)
T ss_dssp             --------------HTTCCHHHHHHHHTTSCSSTTTSCCHHHHHHSTTTSCSSHHH
T ss_pred             --------------hcccCHHHHHHHHHHcCCChhhCcCHHHHhcCccccCCCccc
Confidence                          112356789999999999999999999999999999776433

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=99.97  E-value=4.6e-32  Score=225.28  Aligned_cols=164  Identities=26%  Similarity=0.274  Sum_probs=132.0

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCcccc--CCCCcEEEeecCcceecCc--CcccCcCCCcccchHHhhhc
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLD--GIDMRCKVVDFGNACRANK--QFAEEIQTRQYRAPEVILRA   78 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili--~~~~~~kl~dfg~~~~~~~--~~~~~~~~~~~~~PE~~~~~   78 (237)
                      +++.++..++.|++.||.|+|..+++||||||+|||+  +.++.+||+|||++.....  ......|++.|+|||++.+.
T Consensus       184 l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~  263 (373)
T 2x4f_A          184 LTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNFGTPEFLAPEVVNYD  263 (373)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCBCCCCCSSCTTCCHHHHTTC
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCccccccccCCCcEeChhhccCC
Confidence            6788999999999999999999999999999999999  5678999999999976543  23345789999999999888


Q ss_pred             CCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCC
Q 026540           79 GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFW  158 (237)
Q Consensus        79 ~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (237)
                      .++.++|+||+|++++++++|..||.+..      ....+..+......++.                            
T Consensus       264 ~~~~~~DiwslG~il~elltg~~pf~~~~------~~~~~~~i~~~~~~~~~----------------------------  309 (373)
T 2x4f_A          264 FVSFPTDMWSVGVIAYMLLSGLSPFLGDN------DAETLNNILACRWDLED----------------------------  309 (373)
T ss_dssp             BCCHHHHHHHHHHHHHHHHHSSCTTCCSS------HHHHHHHHHHTCCCSCS----------------------------
T ss_pred             CCCcHHhHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHhccCCCCh----------------------------
Confidence            89999999999999999999999997653      33333333221100000                            


Q ss_pred             chhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccC
Q 026540          159 SLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNS  210 (237)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~  210 (237)
                                ......+.++.+||.+||+.||.+|||++|+++||||.....
T Consensus       310 ----------~~~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~hp~~~~~~~  351 (373)
T 2x4f_A          310 ----------EEFQDISEEAKEFISKLLIKEKSWRISASEALKHPWLSDHKL  351 (373)
T ss_dssp             ----------GGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHCHHH
T ss_pred             ----------hhhccCCHHHHHHHHHHcCCChhhCCCHHHHhcCcCcCCCch
Confidence                      001134678899999999999999999999999999997643

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=99.97  E-value=2.6e-32  Score=236.66  Aligned_cols=166  Identities=21%  Similarity=0.272  Sum_probs=135.1

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCc--CcccCcCCCcccchHHhhhcC
Q 026540            2 TIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK--QFAEEIQTRQYRAPEVILRAG   79 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~--~~~~~~~~~~~~~PE~~~~~~   79 (237)
                      ++++.++..++.|++.||.|+|..+++||||||+|||++.++.+||+|||++.....  ......||+.|+|||++.+..
T Consensus       282 ~l~e~~~~~i~~qIl~aL~yLH~~gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~~~~~~~~~GT~~Y~APEvl~~~~  361 (576)
T 2acx_A          282 GFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNER  361 (576)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECCTTCCEECCCSCGGGCCHHHHTTCE
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCEeccCCchheEEEeCCCCeEEEecccceecccCccccccCCCccccCHHHHcCCC
Confidence            378999999999999999999999999999999999999999999999999976543  234568899999999999888


Q ss_pred             CCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCc
Q 026540           80 YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWS  159 (237)
Q Consensus        80 ~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (237)
                      ++.++|+||+||++++|++|..||......   .....+..   .                                   
T Consensus       362 ~~~~~DiwSLGvilyeLltG~~PF~~~~~~---~~~~~i~~---~-----------------------------------  400 (576)
T 2acx_A          362 YTFSPDWWALGCLLYEMIAGQSPFQQRKKK---IKREEVER---L-----------------------------------  400 (576)
T ss_dssp             ESSHHHHHHHHHHHHHHHHSSCSSSCSSSC---CCHHHHHH---H-----------------------------------
T ss_pred             CCccchHHHHHHHHHHHHhCCCCCcccccc---hhHHHHHH---H-----------------------------------
Confidence            999999999999999999999999765311   01111111   0                                   


Q ss_pred             hhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCC-----CHHHHhcCCCcCcccCC
Q 026540          160 LDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRP-----TAQQCLQHPWLSLRNST  211 (237)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~-----t~~ell~hp~f~~~~~~  211 (237)
                         .......++...+.++.+||.+||+.||.+||     +++|+++||||+..++.
T Consensus       401 ---i~~~~~~~p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~HpfF~~i~w~  454 (576)
T 2acx_A          401 ---VKEVPEEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKLNFK  454 (576)
T ss_dssp             ---HHHCCCCCCTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTSGGGTTCCHH
T ss_pred             ---hhcccccCCccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhChhhccCCHH
Confidence               01111223445678899999999999999999     89999999999987653

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=99.97  E-value=2.8e-32  Score=223.00  Aligned_cols=191  Identities=22%  Similarity=0.300  Sum_probs=140.2

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCc---CcccCcCCCcccchHHhhhc
Q 026540            2 TIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK---QFAEEIQTRQYRAPEVILRA   78 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~---~~~~~~~~~~~~~PE~~~~~   78 (237)
                      ++++..+..++.|++.||.|+|..+++|+||||+||+++.++.++|+|||++.....   ......+++.|+|||.+.+.
T Consensus       120 ~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~  199 (331)
T 4aaa_A          120 GLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGD  199 (331)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCTTC------------CCCCCTTCCHHHHTTC
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCEEccCcChheEEEcCCCcEEEEeCCCceeecCCccccCCCcCCccccCcccccCC
Confidence            367889999999999999999999999999999999999999999999999865432   23445788999999999876


Q ss_pred             -CCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccC
Q 026540           79 -GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKF  157 (237)
Q Consensus        79 -~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (237)
                       .++.++|+||+|++++++++|..||...      .....+..+....+..++...........+ .... ...  ....
T Consensus       200 ~~~~~~~Di~slG~il~~l~~g~~pf~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~--~~~~  269 (331)
T 4aaa_A          200 VKYGKAVDVWAIGCLVTEMFMGEPLFPGD------SDIDQLYHIMMCLGNLIPRHQELFNKNPVF-AGVR-LPE--IKER  269 (331)
T ss_dssp             TTCCTHHHHHHHHHHHHHHHHSSCSCCCS------SHHHHHHHHHHHHCSCCHHHHHHHHHCGGG-TTCC-CCC--CSSC
T ss_pred             CCcchHHHHHHHHHHHHHHHhCCCCCCCC------CcHHHHHHHHHHhCCCChhhhhHhhhcccc-cccc-Ccc--cccc
Confidence             6899999999999999999999999776      467777777777777665543211100000 0000 000  0000


Q ss_pred             CchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCccc
Q 026540          158 WSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRN  209 (237)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~  209 (237)
                      .+....       ...++..+.+||.+||+.||.+|||++|+|+||||....
T Consensus       270 ~~~~~~-------~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~  314 (331)
T 4aaa_A          270 EPLERR-------YPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQMDG  314 (331)
T ss_dssp             CCHHHH-------STTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHGGG
T ss_pred             chhhhc-------ccchhHHHHHHHHHHhccCcccCCCHHHHhcCchhccCC
Confidence            011111       123567899999999999999999999999999998653

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=99.97  E-value=6.9e-32  Score=217.50  Aligned_cols=158  Identities=18%  Similarity=0.276  Sum_probs=125.7

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC---cccCcCCCcccchHHhhhcC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ---FAEEIQTRQYRAPEVILRAG   79 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~~~~PE~~~~~~   79 (237)
                      +++.++..++.|++.||.|+|..+++||||||+||+++.++.+||+|||++......   .....|++.|+|||.+.+..
T Consensus       134 ~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~  213 (298)
T 2zv2_A          134 LSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETR  213 (298)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTC
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEECCCCCEEEecCCCccccccccccccCCcCCccccChhhhccCC
Confidence            678999999999999999999999999999999999999999999999998765432   23457899999999997665


Q ss_pred             ---CCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcccc
Q 026540           80 ---YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLK  156 (237)
Q Consensus        80 ---~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (237)
                         .+.++|+||+|++++++++|..||....      .......+...  ..                            
T Consensus       214 ~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~------~~~~~~~~~~~--~~----------------------------  257 (298)
T 2zv2_A          214 KIFSGKALDVWAMGVTLYCFVFGQCPFMDER------IMCLHSKIKSQ--AL----------------------------  257 (298)
T ss_dssp             CCEESHHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHC--CC----------------------------
T ss_pred             CCCCCchhhhHhHHHHHHHHHHCCCCCCCcc------HHHHHHHHhcc--cC----------------------------
Confidence               3778999999999999999999997542      11111111000  00                            


Q ss_pred             CCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcC
Q 026540          157 FWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLS  206 (237)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~  206 (237)
                                ........+..+.+||.+||+.||.+|||++|+++||||+
T Consensus       258 ----------~~~~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~hp~~~  297 (298)
T 2zv2_A          258 ----------EFPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKLHPWVT  297 (298)
T ss_dssp             ----------CCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTCHHHH
T ss_pred             ----------CCCCccccCHHHHHHHHHHhhcChhhCCCHHHHhcCcccc
Confidence                      0001123467889999999999999999999999999995

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=99.97  E-value=4.4e-32  Score=222.92  Aligned_cols=167  Identities=23%  Similarity=0.317  Sum_probs=128.7

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCC----CcEEEeecCcceecCc---CcccCcCCCcccchHHh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGID----MRCKVVDFGNACRANK---QFAEEIQTRQYRAPEVI   75 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~----~~~kl~dfg~~~~~~~---~~~~~~~~~~~~~PE~~   75 (237)
                      +++.++..++.|++.||.|+|..+++||||||+|||+...    +.+||+|||++.....   ......+++.|+|||++
T Consensus       113 ~~~~~~~~~~~qi~~al~~lH~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~  192 (342)
T 2qr7_A          113 FSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTANFVAPEVL  192 (342)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBCTTCCBCCSSCCSSCCCHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcCCCCceeccCCCccccCHHHh
Confidence            6789999999999999999999999999999999997432    3599999999875432   23455789999999999


Q ss_pred             hhcCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccc
Q 026540           76 LRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRL  155 (237)
Q Consensus        76 ~~~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (237)
                      .+..++.++|+||+|++++++++|..||......   ........+..  +..+                          
T Consensus       193 ~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~---~~~~~~~~i~~--~~~~--------------------------  241 (342)
T 2qr7_A          193 ERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDD---TPEEILARIGS--GKFS--------------------------  241 (342)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTS---CHHHHHHHHHH--CCCC--------------------------
T ss_pred             cCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcC---CHHHHHHHHcc--CCcc--------------------------
Confidence            8888899999999999999999999999754210   11122221111  0000                          


Q ss_pred             cCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccC
Q 026540          156 KFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNS  210 (237)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~  210 (237)
                                .........+..+.+||.+||..||.+|||+.++++||||..+..
T Consensus       242 ----------~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~hp~~~~~~~  286 (342)
T 2qr7_A          242 ----------LSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRHPWIVHWDQ  286 (342)
T ss_dssp             ----------CCSTTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTSHHHHTGGG
T ss_pred             ----------cCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCCeecCccc
Confidence                      000012345678999999999999999999999999999987654

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=99.97  E-value=5.7e-32  Score=230.83  Aligned_cols=158  Identities=22%  Similarity=0.304  Sum_probs=130.3

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCc--CcccCcCCCcccchHHhhhcCC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK--QFAEEIQTRQYRAPEVILRAGY   80 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~--~~~~~~~~~~~~~PE~~~~~~~   80 (237)
                      +++.++..++.|++.||.|+|..+++||||||+|||++.++.+||+|||++.....  ......|++.|+|||++.+..+
T Consensus       113 l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~  192 (476)
T 2y94_A          113 LDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLY  192 (476)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEECTTCCEEECCCSSCEECCTTCCBCCCCSCSTTCCHHHHTTCCB
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCCCcccccHHHEEEecCCCeEEEeccchhhccccccccccCCCcCeEChhhccCCCC
Confidence            67899999999999999999999999999999999999999999999999976543  2345678999999999988765


Q ss_pred             -CchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCc
Q 026540           81 -SFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWS  159 (237)
Q Consensus        81 -~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (237)
                       +.++|+||+|++++++++|..||.+..      .......+                                      
T Consensus       193 ~~~~~DiwSlGvil~elltG~~Pf~~~~------~~~~~~~i--------------------------------------  228 (476)
T 2y94_A          193 AGPEVDIWSSGVILYALLCGTLPFDDDH------VPTLFKKI--------------------------------------  228 (476)
T ss_dssp             CSHHHHHHHHHHHHHHHHHSSCSSCCSS------SHHHHHHH--------------------------------------
T ss_pred             CCCcceehhhHHHHHHHhhCCCCCCCCC------HHHHHHHH--------------------------------------
Confidence             789999999999999999999997653      11111111                                      


Q ss_pred             hhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcc
Q 026540          160 LDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLR  208 (237)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~  208 (237)
                          .......+...++.+.+||.+||+.||.+|||++|+++||||...
T Consensus       229 ----~~~~~~~p~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~hp~~~~~  273 (476)
T 2y94_A          229 ----CDGIFYTPQYLNPSVISLLKHMLQVDPMKRATIKDIREHEWFKQD  273 (476)
T ss_dssp             ----HTTCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTCHHHHTT
T ss_pred             ----hcCCcCCCccCCHHHHHHHHHHcCCCchhCcCHHHHHhCHHhhhc
Confidence                111112233456788999999999999999999999999999854

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=99.97  E-value=8e-32  Score=232.75  Aligned_cols=166  Identities=20%  Similarity=0.227  Sum_probs=134.5

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC---cccCcCCCcccchHHhhhc
Q 026540            2 TIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ---FAEEIQTRQYRAPEVILRA   78 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~~~~PE~~~~~   78 (237)
                      .+++.++..++.|++.||.|+|..+++||||||+|||++.++.+||+|||++......   .....||+.|+|||++.+.
T Consensus       285 ~l~e~~~~~~~~qi~~aL~~LH~~gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~~~~~~~~~~~GT~~Y~APE~l~~~  364 (543)
T 3c4z_A          285 GFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGE  364 (543)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECCTTCCCBCCCCSCTTTSCHHHHTTC
T ss_pred             cccHHHHHHHHHHHHHHHHHHHHcCCcccCCChHHEEEeCCCCEEEeecceeeeccCCCcccccccCCccccChhhhcCC
Confidence            3788999999999999999999999999999999999999999999999999765432   2335889999999999998


Q ss_pred             CCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCC
Q 026540           79 GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFW  158 (237)
Q Consensus        79 ~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (237)
                      .++.++|+||+||++|+|++|..||.......  ........                                      
T Consensus       365 ~~~~~~DiwSlGvilyelltG~~PF~~~~~~~--~~~~~~~~--------------------------------------  404 (543)
T 3c4z_A          365 EYDFSVDYFALGVTLYEMIAARGPFRARGEKV--ENKELKQR--------------------------------------  404 (543)
T ss_dssp             CBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCC--CHHHHHHH--------------------------------------
T ss_pred             CCChHHhcCcchHHHHHHHhCCCCCCCCccch--hHHHHHHH--------------------------------------
Confidence            89999999999999999999999997653110  01111111                                      


Q ss_pred             chhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCC-----HHHHhcCCCcCcccCC
Q 026540          159 SLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPT-----AQQCLQHPWLSLRNST  211 (237)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t-----~~ell~hp~f~~~~~~  211 (237)
                          ........+..++..+.+||.+||+.||.+||+     ++++++||||...++.
T Consensus       405 ----i~~~~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~Hpff~~i~w~  458 (543)
T 3c4z_A          405 ----VLEQAVTYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDISWR  458 (543)
T ss_dssp             ----HHHCCCCCCTTSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHTSGGGTTCCHH
T ss_pred             ----HhhcccCCCcccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHcCccccCCCHH
Confidence                111122334556788999999999999999996     5899999999987653

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=99.97  E-value=6e-32  Score=220.65  Aligned_cols=167  Identities=21%  Similarity=0.297  Sum_probs=111.9

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCC---cEEEeecCcceecCc---CcccCcCCCcccchHHhh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDM---RCKVVDFGNACRANK---QFAEEIQTRQYRAPEVIL   76 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~---~~kl~dfg~~~~~~~---~~~~~~~~~~~~~PE~~~   76 (237)
                      +++.++..++.|++.||.|+|..+++||||||+||+++.++   .+||+|||++.....   ......+++.|+|||++.
T Consensus       103 ~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~  182 (325)
T 3kn6_A          103 FSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELLN  182 (325)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC---------------------
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCCeecCCCHHHEEEecCCCcccEEEeccccceecCCCCCcccccCCCcCccCHHHhc
Confidence            67899999999999999999999999999999999997655   899999999865432   234556789999999999


Q ss_pred             hcCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCC-ChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccc
Q 026540           77 RAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFC-EDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRL  155 (237)
Q Consensus        77 ~~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (237)
                      +..++.++|+||+|++++++++|..||......... ........+   .                              
T Consensus       183 ~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i---~------------------------------  229 (325)
T 3kn6_A          183 QNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKI---K------------------------------  229 (325)
T ss_dssp             -CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHH---T------------------------------
T ss_pred             CCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHH---H------------------------------
Confidence            889999999999999999999999999765321100 011111111   0                              


Q ss_pred             cCCchhHHhhhhcCC----CHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccCC
Q 026540          156 KFWSLDRLLVDKYRF----SETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNST  211 (237)
Q Consensus       156 ~~~~~~~~~~~~~~~----~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~~  211 (237)
                               ......    ....++++.+||.+||+.||.+|||++|+++||||......
T Consensus       230 ---------~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h~w~~~~~~~  280 (325)
T 3kn6_A          230 ---------KGDFSFEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYNEWLQDGSQL  280 (325)
T ss_dssp             ---------TTCCCCCSHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTTCGGGCTTCCC
T ss_pred             ---------cCCCCCCcccccCCCHHHHHHHHHHCCCChhHCCCHHHHhcChhhccCccC
Confidence                     000000    12346789999999999999999999999999999976443

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=99.97  E-value=9e-32  Score=221.10  Aligned_cols=160  Identities=21%  Similarity=0.298  Sum_probs=122.4

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC-----cccCcCCCcccchHHhhh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ-----FAEEIQTRQYRAPEVILR   77 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~-----~~~~~~~~~~~~PE~~~~   77 (237)
                      +++.++..++.|++.||+|+|..+++||||||+|||++ ++.+||+|||++......     .....|++.|+|||++.+
T Consensus       105 ~~~~~~~~i~~qi~~al~~lH~~~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  183 (343)
T 3dbq_A          105 IDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKD  183 (343)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE-TTEEEECCCSSSCCC------------CCCCSSCCHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEE-CCcEEEeecccccccCcccccccCCCCcCCcCcCCHHHHhh
Confidence            57889999999999999999999999999999999997 578999999998654322     224578999999999976


Q ss_pred             -----------cCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhccc
Q 026540           78 -----------AGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRH  146 (237)
Q Consensus        78 -----------~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  146 (237)
                                 ..++.++|+||+|++++++++|..||....     ..   ...+.......                  
T Consensus       184 ~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~-----~~---~~~~~~~~~~~------------------  237 (343)
T 3dbq_A          184 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII-----NQ---ISKLHAIIDPN------------------  237 (343)
T ss_dssp             CC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCC-----SH---HHHHHHHHCTT------------------
T ss_pred             ccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhh-----hH---HHHHHHHhcCC------------------
Confidence                       568899999999999999999999996542     11   11111111100                  


Q ss_pred             CccchhccccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcc
Q 026540          147 GDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLR  208 (237)
Q Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~  208 (237)
                                         .....+...+..+.+|+.+||+.||.+|||+.|+++||||...
T Consensus       238 -------------------~~~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~hp~~~~~  280 (343)
T 3dbq_A          238 -------------------HEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQ  280 (343)
T ss_dssp             -------------------SCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHSC
T ss_pred             -------------------cccCCcccCCHHHHHHHHHHcCCChhHCCCHHHHHhCcccccc
Confidence                               0111233345678899999999999999999999999999854

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=99.97  E-value=1.6e-31  Score=219.45  Aligned_cols=164  Identities=23%  Similarity=0.246  Sum_probs=127.2

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCC--cEEEeecCcceecCc-------CcccCcCCCcccchH
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDM--RCKVVDFGNACRANK-------QFAEEIQTRQYRAPE   73 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~--~~kl~dfg~~~~~~~-------~~~~~~~~~~~~~PE   73 (237)
                      +++..+..++.|++.||.|+|..+++||||||+||+++.++  .+||+|||++.....       ......+++.|+|||
T Consensus       165 ~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE  244 (345)
T 3hko_A          165 QREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPE  244 (345)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHH
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHCCccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCch
Confidence            47888999999999999999999999999999999998766  899999999875432       123457899999999


Q ss_pred             Hhhh--cCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccch
Q 026540           74 VILR--AGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKR  151 (237)
Q Consensus        74 ~~~~--~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (237)
                      .+.+  ..++.++|+||+|++++++++|..||.+..      .......+.......+                      
T Consensus       245 ~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~------~~~~~~~~~~~~~~~~----------------------  296 (345)
T 3hko_A          245 VLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVN------DADTISQVLNKKLCFE----------------------  296 (345)
T ss_dssp             HHTCSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHCCCCTT----------------------
T ss_pred             hhccCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCC------hHHHHHHHHhcccccC----------------------
Confidence            9976  568899999999999999999999997653      2222222211100000                      


Q ss_pred             hccccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccC
Q 026540          152 IRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNS  210 (237)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~  210 (237)
                                      .......+..+.+||.+||+.||.+|||+.|+++||||+....
T Consensus       297 ----------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~hp~~~~~~~  339 (345)
T 3hko_A          297 ----------------NPNYNVLSPLARDLLSNLLNRNVDERFDAMRALQHPWISQFSD  339 (345)
T ss_dssp             ----------------SGGGGGSCHHHHHHHHHHSCSCTTTSCCHHHHHHSHHHHTTSS
T ss_pred             ----------------CcccccCCHHHHHHHHHHcCCChhHCCCHHHHhcChhhccChH
Confidence                            0001124678899999999999999999999999999997654

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=99.97  E-value=1.1e-31  Score=222.22  Aligned_cols=162  Identities=20%  Similarity=0.260  Sum_probs=118.0

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCc--EEEeecCcceecC--cCcccCcCCCcccchHHhhhc
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMR--CKVVDFGNACRAN--KQFAEEIQTRQYRAPEVILRA   78 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~--~kl~dfg~~~~~~--~~~~~~~~~~~~~~PE~~~~~   78 (237)
                      +++.++..++.|++.||.|+|..+++||||||+||+++.++.  +||+|||++....  .......|++.|+|||++.+.
T Consensus       113 ~~~~~~~~i~~ql~~~L~~LH~~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~  192 (361)
T 3uc3_A          113 FSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLRQ  192 (361)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTCCSCCCCGGGEEECSSSSCCEEECCCCCC---------------CTTSCHHHHHCS
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCceEEEeecCccccccccCCCCCCcCCCCcCChhhhcCC
Confidence            678899999999999999999999999999999999987665  9999999986322  233455789999999999988


Q ss_pred             CCCch-hhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccC
Q 026540           79 GYSFS-VDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKF  157 (237)
Q Consensus        79 ~~~~~-~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (237)
                      .+..+ +|+||+|++++++++|..||.+....     ......+..+..                               
T Consensus       193 ~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~-----~~~~~~~~~~~~-------------------------------  236 (361)
T 3uc3_A          193 EYDGKIADVWSCGVTLYVMLVGAYPFEDPEEP-----RDYRKTIQRILS-------------------------------  236 (361)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHHSSCSCC----C-----CCHHHHHHHHHT-------------------------------
T ss_pred             CCCCCeeeeehhHHHHHHHHhCCCCCCCCccH-----HHHHHHHHHHhc-------------------------------
Confidence            87655 89999999999999999999765311     111111111110                               


Q ss_pred             CchhHHhhhhcCC--CHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcc
Q 026540          158 WSLDRLLVDKYRF--SETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLR  208 (237)
Q Consensus       158 ~~~~~~~~~~~~~--~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~  208 (237)
                              .....  ....+..+.+||.+||+.||.+|||++|+++||||...
T Consensus       237 --------~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~hp~f~~~  281 (361)
T 3uc3_A          237 --------VKYSIPDDIRISPECCHLISRIFVADPATRISIPEIKTHSWFLKN  281 (361)
T ss_dssp             --------TCCCCCTTSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTSHHHHTT
T ss_pred             --------CCCCCCCcCCCCHHHHHHHHHHccCChhHCcCHHHHHhCcchhcC
Confidence                    01111  11246788999999999999999999999999999644

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=99.97  E-value=1.8e-31  Score=223.03  Aligned_cols=161  Identities=20%  Similarity=0.283  Sum_probs=123.6

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC-----cccCcCCCcccchHHhhh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ-----FAEEIQTRQYRAPEVILR   77 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~-----~~~~~~~~~~~~PE~~~~   77 (237)
                      +++.++..++.|++.||+|+|..+++||||||+|||++ ++.+||+|||++......     .....|++.|+|||++.+
T Consensus       152 ~~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  230 (390)
T 2zmd_A          152 IDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKD  230 (390)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHTTTCCCCCCCGGGEEES-SSCEEECCCSSSCCC---------CCSCCCGGGCCHHHHHC
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEEE-CCeEEEEecCccccccCCCccccCCCCCcCCCccChHHhhh
Confidence            56778999999999999999999999999999999995 578999999998654322     234578999999999975


Q ss_pred             -----------cCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhccc
Q 026540           78 -----------AGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRH  146 (237)
Q Consensus        78 -----------~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  146 (237)
                                 ..++.++|+||+||+++++++|..||....     .....   +..+.....                 
T Consensus       231 ~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~-----~~~~~---~~~~~~~~~-----------------  285 (390)
T 2zmd_A          231 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII-----NQISK---LHAIIDPNH-----------------  285 (390)
T ss_dssp             C------------CCHHHHHHHHHHHHHHHHHSSCTTTTCC-----CHHHH---HHHHHCTTS-----------------
T ss_pred             ccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhh-----HHHHH---HHHHhCccc-----------------
Confidence                       358899999999999999999999996542     11111   111111000                 


Q ss_pred             CccchhccccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCccc
Q 026540          147 GDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRN  209 (237)
Q Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~  209 (237)
                                          ....+...+..+.+||.+||+.||.+|||+.|+|+||||....
T Consensus       286 --------------------~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~~~~~  328 (390)
T 2zmd_A          286 --------------------EIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQT  328 (390)
T ss_dssp             --------------------CCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHSCC
T ss_pred             --------------------cCCCCccchHHHHHHHHHHcccChhhCCCHHHHhhCcCccccC
Confidence                                0111223356788999999999999999999999999998553

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=99.97  E-value=1e-31  Score=214.98  Aligned_cols=161  Identities=19%  Similarity=0.274  Sum_probs=131.5

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCc-CcccCcCCCcccchHHhhhcCCC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK-QFAEEIQTRQYRAPEVILRAGYS   81 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~-~~~~~~~~~~~~~PE~~~~~~~~   81 (237)
                      +++.++..++.|++.||.|+|..+++|+||||+||+++.++.++|+|||++..... ......+++.|+|||.+.+..++
T Consensus       111 ~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  190 (284)
T 2vgo_A          111 FDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRTMCGTLDYLPPEMIEGKTHD  190 (284)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTCCEEECCCTTCEECSSSCBCCCCSCGGGCCHHHHTTCCBC
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEEcCCCCEEEecccccccCcccccccccCCCCcCCHHHhccCCCC
Confidence            57889999999999999999999999999999999999999999999999865443 23345778999999999988899


Q ss_pred             chhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCchh
Q 026540           82 FSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLD  161 (237)
Q Consensus        82 ~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (237)
                      .++|+||+|++++++++|..||....      .......+..                                      
T Consensus       191 ~~~Di~slG~il~~l~~g~~pf~~~~------~~~~~~~~~~--------------------------------------  226 (284)
T 2vgo_A          191 EKVDLWCAGVLCYEFLVGMPPFDSPS------HTETHRRIVN--------------------------------------  226 (284)
T ss_dssp             TTHHHHHHHHHHHHHHHSSCTTCCSS------HHHHHHHHHT--------------------------------------
T ss_pred             cccchhhHHHHHHHHHHCCCCCCCCC------HhHHHHHHhc--------------------------------------
Confidence            99999999999999999999997542      2111111110                                      


Q ss_pred             HHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccCC
Q 026540          162 RLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNST  211 (237)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~~  211 (237)
                          .....+...+..+.+||.+||+.||.+|||++++++||||+.....
T Consensus       227 ----~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~h~~~~~~~~~  272 (284)
T 2vgo_A          227 ----VDLKFPPFLSDGSKDLISKLLRYHPPQRLPLKGVMEHPWVKANSRR  272 (284)
T ss_dssp             ----TCCCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTCHHHHHHCCC
T ss_pred             ----cccCCCCcCCHHHHHHHHHHhhcCHhhCCCHHHHhhCHHHHhhccc
Confidence                1112233456788999999999999999999999999999866543

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=99.97  E-value=9.4e-32  Score=214.52  Aligned_cols=159  Identities=19%  Similarity=0.303  Sum_probs=108.4

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCc---CcccCcCCCcccchHHhhhcC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK---QFAEEIQTRQYRAPEVILRAG   79 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~---~~~~~~~~~~~~~PE~~~~~~   79 (237)
                      +++.++..++.|++.||.|+|..+++|+||||+||+++.++.++|+|||++.....   ......+++.|+|||.+.+..
T Consensus       109 ~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  188 (278)
T 3cok_A          109 FSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIATRSA  188 (278)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTEECSSCCGGGEEECTTCCEEECCCTTCEECC-------------------------
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEEEeecceeeccCCCCcceeccCCCCcCCcchhcCCC
Confidence            67889999999999999999999999999999999999999999999999876442   223456789999999998888


Q ss_pred             CCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCc
Q 026540           80 YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWS  159 (237)
Q Consensus        80 ~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (237)
                      ++.++|+||+|++++++++|..||.......      .+.                                        
T Consensus       189 ~~~~~Di~slG~il~~l~~g~~p~~~~~~~~------~~~----------------------------------------  222 (278)
T 3cok_A          189 HGLESDVWSLGCMFYTLLIGRPPFDTDTVKN------TLN----------------------------------------  222 (278)
T ss_dssp             ---CTHHHHHHHHHHHHHHSSCSSCCCSCC--------------------------------------------------
T ss_pred             CCchhhHHHHHHHHHHHHhCCCCCCChhHHH------HHH----------------------------------------
Confidence            8999999999999999999999997553110      000                                        


Q ss_pred             hhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCccc
Q 026540          160 LDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRN  209 (237)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~  209 (237)
                        .........+...+.++.+||.+||+.||.+|||++++++||||....
T Consensus       223 --~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~  270 (278)
T 3cok_A          223 --KVVLADYEMPSFLSIEAKDLIHQLLRRNPADRLSLSSVLDHPFMSRNS  270 (278)
T ss_dssp             ---CCSSCCCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSTTTC---
T ss_pred             --HHhhcccCCccccCHHHHHHHHHHcccCHhhCCCHHHHhcCccccCCC
Confidence              000001122334567889999999999999999999999999998654

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=99.97  E-value=6.8e-32  Score=216.40  Aligned_cols=166  Identities=25%  Similarity=0.287  Sum_probs=121.6

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhhh-cCCccCCCCCccccCCCCcEEEeecCcceecCcC--cccCcCCCcccchHHh---
Q 026540            2 TIVEKKLKRRAKRAVANISIRRAS-MGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ--FAEEIQTRQYRAPEVI---   75 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~~-~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~--~~~~~~~~~~~~PE~~---   75 (237)
                      .+++..+..++.|++.||.|+|.. +++|+||||+||+++.++.++|+|||++......  .....+++.|+|||.+   
T Consensus       105 ~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~  184 (290)
T 3fme_A          105 TIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDAGCKPYMAPERINPE  184 (290)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHHSCCCCCCCSGGGCEECTTCCEEBCCC---------------CCCCCCSCHHHHSCC
T ss_pred             CCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeecCCcccccccccccccCCCccccChhhcChh
Confidence            367889999999999999999998 9999999999999999999999999998654332  2234688999999997   


Q ss_pred             -hhcCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcc
Q 026540           76 -LRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRR  154 (237)
Q Consensus        76 -~~~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (237)
                       .+..++.++|+||+|++++++++|..||....     .....+......  ..                          
T Consensus       185 ~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~-----~~~~~~~~~~~~--~~--------------------------  231 (290)
T 3fme_A          185 LNQKGYSVKSDIWSLGITMIELAILRFPYDSWG-----TPFQQLKQVVEE--PS--------------------------  231 (290)
T ss_dssp             TTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCS-----CHHHHHHHHHHS--CC--------------------------
T ss_pred             hcCcCCCcHHHHHHHHHHHHHHHHCCCCccccC-----chHHHHHHHhcc--CC--------------------------
Confidence             34568899999999999999999999997532     122222211110  00                          


Q ss_pred             ccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccCCc
Q 026540          155 LKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNSTR  212 (237)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~~~  212 (237)
                                  ........+..+.+|+.+||+.||.+|||++|+++||||+......
T Consensus       232 ------------~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~hp~f~~~~~~~  277 (290)
T 3fme_A          232 ------------PQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFFTLHESKG  277 (290)
T ss_dssp             ------------CCCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHHHHSC
T ss_pred             ------------CCcccccCCHHHHHHHHHHhhcChhhCcCHHHHHhCcccccCcccc
Confidence                        0001123467889999999999999999999999999999765443

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=99.97  E-value=8.2e-32  Score=218.60  Aligned_cols=194  Identities=24%  Similarity=0.349  Sum_probs=137.0

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccC-CCCcEEEeecCcceecCc------CcccCcCCCcccchHHh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDG-IDMRCKVVDFGNACRANK------QFAEEIQTRQYRAPEVI   75 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~-~~~~~kl~dfg~~~~~~~------~~~~~~~~~~~~~PE~~   75 (237)
                      +++.++..++.|++.||.|+|..+++|+||||+||+++ .++.+||+|||++.....      ......++..|+|||.+
T Consensus       117 ~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~  196 (320)
T 2i6l_A          117 LLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLL  196 (320)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTTEEEECCCTTCBCC--------CCCGGGSCCTTCCHHHH
T ss_pred             ccHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCeEEEccCccccccCCCcccccccccccccccccCcHHh
Confidence            56888999999999999999999999999999999997 567999999999865432      22344668899999998


Q ss_pred             hh-cCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcc
Q 026540           76 LR-AGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRR  154 (237)
Q Consensus        76 ~~-~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (237)
                      .+ ..++.++|+||+|++++++++|..||.+..      .......+.....................+..     ....
T Consensus       197 ~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~  265 (320)
T 2i6l_A          197 LSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAH------ELEQMQLILESIPVVHEEDRQELLSVIPVYIR-----NDMT  265 (320)
T ss_dssp             HCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHHSCCCCHHHHHHHHTTSCHHHH-----HHTT
T ss_pred             cCcccCCchhhhHhHHHHHHHHHhCCCCCCCCC------HHHHHHHHHHhcCCCchhhhhhhhhcCccccc-----cccc
Confidence            86 568999999999999999999999998663      55555555555444333322110000000000     0000


Q ss_pred             ccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccCCccc
Q 026540          155 LKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNSTRDE  214 (237)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~~~~~  214 (237)
                      ....+...       .....+..+.+||.+||+.||.+|||++|+++||||+.......+
T Consensus       266 ~~~~~~~~-------~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~p~~~  318 (320)
T 2i6l_A          266 EPHKPLTQ-------LLPGISREAVDFLEQILTFSPMDRLTAEEALSHPYMSIYSFPMDE  318 (320)
T ss_dssp             SCCCCHHH-------HSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTSHHHHTTCC----
T ss_pred             CCCCChhH-------hcchhhHHHHHHHHHHcCCCccccCCHHHHhCCcccccccCccCC
Confidence            00000111       122457789999999999999999999999999999977655443

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=99.97  E-value=6.2e-31  Score=217.92  Aligned_cols=161  Identities=27%  Similarity=0.392  Sum_probs=127.4

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCc--CcccCcCCCcccchHHhhhc-
Q 026540            2 TIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK--QFAEEIQTRQYRAPEVILRA-   78 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~--~~~~~~~~~~~~~PE~~~~~-   78 (237)
                      .+++..+..++.|++.||.|+|..+++|+||||+||+++.++.++|+|||++.....  ......|++.|+|||++.+. 
T Consensus       196 ~l~~~~~~~i~~qi~~~L~~LH~~gi~H~Dlkp~NIl~~~~~~ikl~DfG~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~  275 (365)
T 2y7j_A          196 ALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLRELCGTPGYLAPEILKCSM  275 (365)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECCTTCCBCCCCSCGGGCCHHHHHHTT
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEEecCcccccCCCcccccCCCCCCccChhhccccc
Confidence            367889999999999999999999999999999999999999999999999876542  34456789999999999743 


Q ss_pred             -----CCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhc
Q 026540           79 -----GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIR  153 (237)
Q Consensus        79 -----~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (237)
                           .++.++|+||+|++++++++|..||....      ....+..+.......+...                     
T Consensus       276 ~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~------~~~~~~~i~~~~~~~~~~~---------------------  328 (365)
T 2y7j_A          276 DETHPGYGKEVDLWACGVILFTLLAGSPPFWHRR------QILMLRMIMEGQYQFSSPE---------------------  328 (365)
T ss_dssp             CTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHTCCCCCHHH---------------------
T ss_pred             cccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCC------HHHHHHHHHhCCCCCCCcc---------------------
Confidence                 47889999999999999999999997542      2222222211100000000                     


Q ss_pred             cccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcC
Q 026540          154 RLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLS  206 (237)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~  206 (237)
                                       ....+..+.+||.+||+.||.+|||++|+++||||.
T Consensus       329 -----------------~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~f~  364 (365)
T 2y7j_A          329 -----------------WDDRSSTVKDLISRLLQVDPEARLTAEQALQHPFFE  364 (365)
T ss_dssp             -----------------HSSSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGC
T ss_pred             -----------------cccCCHHHHHHHHHHcCCChhHCcCHHHHhcCcccC
Confidence                             012356789999999999999999999999999996

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=99.97  E-value=1.6e-31  Score=220.61  Aligned_cols=166  Identities=19%  Similarity=0.197  Sum_probs=130.1

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCc----CcccCcCCCcccchHHhhhc
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK----QFAEEIQTRQYRAPEVILRA   78 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~----~~~~~~~~~~~~~PE~~~~~   78 (237)
                      +++.++..++.|++.||.|+|..+++||||||+|||++.++.+||+|||++.....    ......|++.|+|||++.+.
T Consensus       156 ~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  235 (355)
T 1vzo_A          156 FTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGG  235 (355)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEESCSSEEEECCGGGGGGGCGGGSCCTTCCHHHHTTC
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCcEEEeeCCCCeecccCCCCcccCcccCcCccChhhhcCC
Confidence            57889999999999999999999999999999999999999999999999875432    22345789999999999864


Q ss_pred             --CCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcccc
Q 026540           79 --GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLK  156 (237)
Q Consensus        79 --~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (237)
                        .++.++|+||+|++++++++|..||......   .....+  ....                                
T Consensus       236 ~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~---~~~~~~--~~~~--------------------------------  278 (355)
T 1vzo_A          236 DSGHDKAVDWWSLGVLMYELLTGASPFTVDGEK---NSQAEI--SRRI--------------------------------  278 (355)
T ss_dssp             C---CTHHHHHHHHHHHHHHHHSSCTTSCTTSC---CCHHHH--HHHH--------------------------------
T ss_pred             CCCCCchhhHHHHHHHHHHHHHCCCCCccCCcc---chHHHH--HHHH--------------------------------
Confidence              4788999999999999999999999754311   111111  0000                                


Q ss_pred             CCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCC-----CHHHHhcCCCcCcccCCc
Q 026540          157 FWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRP-----TAQQCLQHPWLSLRNSTR  212 (237)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~-----t~~ell~hp~f~~~~~~~  212 (237)
                             .......+...+..+.+||.+||..||.+||     |++|+++||||...++..
T Consensus       279 -------~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~~f~~~~~~~  332 (355)
T 1vzo_A          279 -------LKSEPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKINWDD  332 (355)
T ss_dssp             -------HHCCCCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGGTTCCHHH
T ss_pred             -------hccCCCCCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCcchhcCChhH
Confidence                   1111223445567889999999999999999     999999999999876543

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.97  E-value=2.5e-31  Score=228.11  Aligned_cols=165  Identities=27%  Similarity=0.339  Sum_probs=128.5

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccC---CCCcEEEeecCcceecC--cCcccCcCCCcccchHHhhh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDG---IDMRCKVVDFGNACRAN--KQFAEEIQTRQYRAPEVILR   77 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~---~~~~~kl~dfg~~~~~~--~~~~~~~~~~~~~~PE~~~~   77 (237)
                      +++.++..++.|++.||.|+|..+++||||||+|||++   .++.+||+|||++....  .......|++.|+|||++.+
T Consensus       118 ~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~  197 (486)
T 3mwu_A          118 FSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRG  197 (486)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCCC----CCTTGGGGCCGGGGGS
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEEECCcCeECCCCCccCCCcCCCCCCCHHHhCC
Confidence            57889999999999999999999999999999999995   45679999999986443  23345678999999999865


Q ss_pred             cCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccC
Q 026540           78 AGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKF  157 (237)
Q Consensus        78 ~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (237)
                       .++.++|+||+|++++++++|..||.+..      ....+..+.......+                            
T Consensus       198 -~~~~~~DiwslG~il~~ll~g~~pf~~~~------~~~~~~~i~~~~~~~~----------------------------  242 (486)
T 3mwu_A          198 -TYDEKCDVWSAGVILYILLSGTPPFYGKN------EYDILKRVETGKYAFD----------------------------  242 (486)
T ss_dssp             -CCCHHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHTCCCSC----------------------------
T ss_pred             -CCCchhhHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHhCCCCCC----------------------------
Confidence             58999999999999999999999997653      3333332221100000                            


Q ss_pred             CchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccCCc
Q 026540          158 WSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNSTR  212 (237)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~~~  212 (237)
                                .......++.+.+||.+||+.||.+|||+.|+|+||||.......
T Consensus       243 ----------~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~hp~~~~~~~~~  287 (486)
T 3mwu_A          243 ----------LPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKYSSET  287 (486)
T ss_dssp             ----------SGGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHCHHHHHTCCCC
T ss_pred             ----------CcccCCCCHHHHHHHHHHcCCChhhCcCHHHHhcCHhhccCcccC
Confidence                      000123467889999999999999999999999999999765443

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=99.97  E-value=1e-31  Score=222.06  Aligned_cols=202  Identities=20%  Similarity=0.258  Sum_probs=131.2

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhh-cCCccCCCCCccccCCCCcEEEeecCcceecC-cCcccCcCCCcccchHHhhhcCC
Q 026540            3 IVEKKLKRRAKRAVANISIRRAS-MGGIELPKPERCLDGIDMRCKVVDFGNACRAN-KQFAEEIQTRQYRAPEVILRAGY   80 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~-~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~-~~~~~~~~~~~~~~PE~~~~~~~   80 (237)
                      +++..+..++.+++.+|.|+|.. +++|+||||+||+++.++.++|+|||++.... .......+++.|+|||++.+..+
T Consensus       128 ~~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~  207 (360)
T 3eqc_A          128 IPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHY  207 (360)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHC----CCCCTTCCHHHHTTCCC
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHhCCEEcCCccHHHEEECCCCCEEEEECCCCcccccccccCCCCCCCeECHHHHcCCCC
Confidence            56788999999999999999996 89999999999999999999999999885432 22334578999999999998899


Q ss_pred             CchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHH--HHCCCCHHHHhcCCCchhhhcccCccchhccccCC
Q 026540           81 SFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMME--LIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFW  158 (237)
Q Consensus        81 ~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (237)
                      +.++|+||+|++++++++|..||....       ...+..+..  ..+...... .........+....... .......
T Consensus       208 ~~~~Di~slG~il~~l~~g~~pf~~~~-------~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~  278 (360)
T 3eqc_A          208 SVQSDIWSMGLSLVEMAVGRYPIPPPD-------AKELELMFGCQVEGDAAETP-PRPRTPGRPLNKFGMDS-RPPMAIF  278 (360)
T ss_dssp             SHHHHHHHHHHHHHHHHHTSCCSSCCC-------HHHHHHHHC--------------------------------CCCHH
T ss_pred             CchhhHHHHHHHHHHHHhCCCCCCCCC-------HHHHHHHhcccccccCCCCC-CCcccCCCcccccccCC-CCcccch
Confidence            999999999999999999999997653       222222211  111111000 00000000000000000 0000000


Q ss_pred             c-hhHHhhhh--cCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccCCcc
Q 026540          159 S-LDRLLVDK--YRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNSTRD  213 (237)
Q Consensus       159 ~-~~~~~~~~--~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~~~~  213 (237)
                      . ........  .......+..+.+||.+||+.||++|||++|+|+||||+.......
T Consensus       279 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~~~~  336 (360)
T 3eqc_A          279 ELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSDAEEV  336 (360)
T ss_dssp             HHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSHHHHHHHHSCC
T ss_pred             hhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhhChHhhcchHhhh
Confidence            0 01111110  0112235778999999999999999999999999999997765444

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.97  E-value=1.2e-31  Score=229.85  Aligned_cols=163  Identities=21%  Similarity=0.296  Sum_probs=129.4

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCcccc---CCCCcEEEeecCcceecCc--CcccCcCCCcccchHHhhh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLD---GIDMRCKVVDFGNACRANK--QFAEEIQTRQYRAPEVILR   77 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili---~~~~~~kl~dfg~~~~~~~--~~~~~~~~~~~~~PE~~~~   77 (237)
                      +++.++..++.|++.||.|+|..+++||||||+|||+   +.++.+||+|||++.....  ......|++.|+|||++.+
T Consensus       123 ~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~  202 (484)
T 3nyv_A          123 FSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHG  202 (484)
T ss_dssp             CBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCCCCSHHHHTTGGGTCCHHHHHT
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEcccccccccCCCCccccCceeecC
Confidence            6788999999999999999999999999999999999   4578999999999865432  2334578999999999865


Q ss_pred             cCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccC
Q 026540           78 AGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKF  157 (237)
Q Consensus        78 ~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (237)
                       .++.++|+||+|++++++++|..||.+..      ....+..+.......+                            
T Consensus       203 -~~~~~~DiwslG~il~~ll~g~~pf~~~~------~~~~~~~i~~~~~~~~----------------------------  247 (484)
T 3nyv_A          203 -TYDEKCDVWSTGVILYILLSGCPPFNGAN------EYDILKKVEKGKYTFE----------------------------  247 (484)
T ss_dssp             -CCCTHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHCCCCCC----------------------------
T ss_pred             -CCCCcceeHHHHHHHHHHHHCCCCCCCCC------HHHHHHHHHcCCCCCC----------------------------
Confidence             68999999999999999999999997653      3333332221100000                            


Q ss_pred             CchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccC
Q 026540          158 WSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNS  210 (237)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~  210 (237)
                                .......+..+.+||.+||+.||.+|||++|+|+||||.....
T Consensus       248 ----------~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h~~~~~~~~  290 (484)
T 3nyv_A          248 ----------LPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQTYTK  290 (484)
T ss_dssp             ----------SGGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTSHHHHHHTC
T ss_pred             ----------CcccccCCHHHHHHHHHHCCCChhHCcCHHHHhhChhhccccc
Confidence                      0001234678899999999999999999999999999987654

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=99.97  E-value=1.3e-30  Score=212.62  Aligned_cols=153  Identities=18%  Similarity=0.205  Sum_probs=120.4

Q ss_pred             HHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC---------------cccCcCCCcc
Q 026540            5 EKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ---------------FAEEIQTRQY   69 (237)
Q Consensus         5 ~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~---------------~~~~~~~~~~   69 (237)
                      +..+..++.|++.||.|+|..+++||||||+||+++.++.+||+|||++......               .....|++.|
T Consensus       163 ~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y  242 (332)
T 3qd2_B          163 HGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLY  242 (332)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGGG
T ss_pred             hHHHHHHHHHHHHHHHHHHhCCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcCc
Confidence            4468899999999999999999999999999999999999999999998765432               2234689999


Q ss_pred             cchHHhhhcCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHH-CCCCHHHHhcCCCchhhhcccCc
Q 026540           70 RAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELI-GKMPRKIAIGGAQSKDYFDRHGD  148 (237)
Q Consensus        70 ~~PE~~~~~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  148 (237)
                      +|||.+.+..++.++|+||+|++++++++|..++..           ......... +..+.                  
T Consensus       243 ~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~-----------~~~~~~~~~~~~~~~------------------  293 (332)
T 3qd2_B          243 MSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQME-----------RVRIITDVRNLKFPL------------------  293 (332)
T ss_dssp             SCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHH-----------HHHHHHHHHTTCCCH------------------
T ss_pred             cChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhH-----------HHHHHHHhhccCCCc------------------
Confidence            999999998999999999999999999998655421           111111111 00000                  


Q ss_pred             cchhccccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCc
Q 026540          149 LKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSL  207 (237)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~  207 (237)
                                           .....++.+.+||.+||+.||.+|||++|+++||||++
T Consensus       294 ---------------------~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~f~~  331 (332)
T 3qd2_B          294 ---------------------LFTQKYPQEHMMVQDMLSPSPTERPEATDIIENAIFEN  331 (332)
T ss_dssp             ---------------------HHHHHCHHHHHHHHHHHCSSGGGSCCHHHHHHSTTCCC
T ss_pred             ---------------------ccccCChhHHHHHHHHccCCCCcCCCHHHHhhchhhhc
Confidence                                 01123466789999999999999999999999999985

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=99.97  E-value=5.2e-31  Score=213.91  Aligned_cols=170  Identities=21%  Similarity=0.285  Sum_probs=122.0

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCc---EEEeecCcceecCc----------CcccCcCCCcc
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMR---CKVVDFGNACRANK----------QFAEEIQTRQY   69 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~---~kl~dfg~~~~~~~----------~~~~~~~~~~~   69 (237)
                      +++.++..++.|++.||.|+|..+++||||||+||+++.++.   +||+|||++.....          ......|++.|
T Consensus       108 ~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y  187 (316)
T 2ac3_A          108 FNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEY  187 (316)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC-------------------CCSGGG
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEEccCCCcCceEEEEccCccccccCCccccccccccccccCCcCc
Confidence            578899999999999999999999999999999999988765   99999998854321          12234689999


Q ss_pred             cchHHhhh-----cCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCCh-----HHHHHHHHHHHCCCCHHHHhcCCCc
Q 026540           70 RAPEVILR-----AGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCED-----EDHLALMMELIGKMPRKIAIGGAQS  139 (237)
Q Consensus        70 ~~PE~~~~-----~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~  139 (237)
                      +|||++.+     ..++.++|+||+|++++++++|..||.+.......-.     ......+..                
T Consensus       188 ~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~----------------  251 (316)
T 2ac3_A          188 MAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFE----------------  251 (316)
T ss_dssp             CCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHHHHHH----------------
T ss_pred             cChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHHHHHHH----------------
Confidence            99999985     4578899999999999999999999976542210000     000000000                


Q ss_pred             hhhhcccCccchhccccCCchhHHhhhhcCCC----HHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccC
Q 026540          140 KDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFS----ETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNS  210 (237)
Q Consensus       140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~  210 (237)
                                            .........+    ...+..+.+||.+||+.||.+|||++|+++||||.+...
T Consensus       252 ----------------------~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~~~~~~~  304 (316)
T 2ac3_A          252 ----------------------SIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQGCAP  304 (316)
T ss_dssp             ----------------------HHHHCCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSTTCC----
T ss_pred             ----------------------HHhccCcccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhcChhhcCCCC
Confidence                                  0000111111    124678899999999999999999999999999997643

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=99.97  E-value=6.3e-31  Score=209.59  Aligned_cols=163  Identities=24%  Similarity=0.287  Sum_probs=128.5

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCcccc---CCCCcEEEeecCcceecCc--CcccCcCCCcccchHHhhh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLD---GIDMRCKVVDFGNACRANK--QFAEEIQTRQYRAPEVILR   77 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili---~~~~~~kl~dfg~~~~~~~--~~~~~~~~~~~~~PE~~~~   77 (237)
                      +++.++..++.|++.||.|+|..+++|+||||+||++   +.++.++|+|||++.....  ......+++.|+|||.+.+
T Consensus       103 ~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~  182 (277)
T 3f3z_A          103 FRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVLEG  182 (277)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTTSCBCCCCSCTTTCCHHHHTT
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEecCCCCCcEEEEecccceeccCccchhccCCCCCccChHHhcc
Confidence            5788999999999999999999999999999999999   7788999999999865442  3345578999999998864


Q ss_pred             cCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccC
Q 026540           78 AGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKF  157 (237)
Q Consensus        78 ~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (237)
                       .++.++|+||+|++++++++|..||....      .......+.+.....+...                         
T Consensus       183 -~~~~~~Di~slG~~l~~l~~g~~p~~~~~------~~~~~~~~~~~~~~~~~~~-------------------------  230 (277)
T 3f3z_A          183 -LYGPECDEWSAGVMMYVLLCGYPPFSAPT------DSEVMLKIREGTFTFPEKD-------------------------  230 (277)
T ss_dssp             -CBCTTHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHCCCCCCHHH-------------------------
T ss_pred             -cCCchhhehhHHHHHHHHHHCCCCCCCCC------HHHHHHHHHhCCCCCCchh-------------------------
Confidence             48899999999999999999999997652      2222222211111111100                         


Q ss_pred             CchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccC
Q 026540          158 WSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNS  210 (237)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~  210 (237)
                                   ....++.+.+|+.+||+.||.+|||+.|+++||||.....
T Consensus       231 -------------~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~~  270 (277)
T 3f3z_A          231 -------------WLNVSPQAESLIRRLLTKSPKQRITSLQALEHEWFEKQLS  270 (277)
T ss_dssp             -------------HTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTSHHHHHHHC
T ss_pred             -------------hhcCCHHHHHHHHHHccCChhhCcCHHHHhcCHHHhcccc
Confidence                         0123678899999999999999999999999999986543

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=99.97  E-value=3.6e-31  Score=215.56  Aligned_cols=154  Identities=20%  Similarity=0.286  Sum_probs=127.0

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccC-CCCcEEEeecCcceecCcC-cccCcCCCcccchHHhhhcCC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDG-IDMRCKVVDFGNACRANKQ-FAEEIQTRQYRAPEVILRAGY   80 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~-~~~~~kl~dfg~~~~~~~~-~~~~~~~~~~~~PE~~~~~~~   80 (237)
                      +++..+..++.|++.||.|+|..+++||||||+||+++ .++.+||+|||++...... .....+++.|+|||.+.+..+
T Consensus       146 l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~kL~Dfg~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~  225 (320)
T 3a99_A          146 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRY  225 (320)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCCTTCEECCSSCBCCCCSCGGGSCHHHHHHSCB
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCcEeCCCCHHHEEEeCCCCCEEEeeCccccccccccccCCCCCccCCChHHhccCCC
Confidence            57888999999999999999999999999999999998 6789999999998765432 334578999999999988775


Q ss_pred             -CchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCc
Q 026540           81 -SFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWS  159 (237)
Q Consensus        81 -~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (237)
                       +.++|+||+|++++++++|..||....        .    +                                      
T Consensus       226 ~~~~~Di~slG~il~el~~g~~pf~~~~--------~----~--------------------------------------  255 (320)
T 3a99_A          226 HGRSAAVWSLGILLYDMVCGDIPFEHDE--------E----I--------------------------------------  255 (320)
T ss_dssp             CHHHHHHHHHHHHHHHHHHSSCSCCSHH--------H----H--------------------------------------
T ss_pred             CCccchHHhHHHHHHHHHHCCCCCCChh--------h----h--------------------------------------
Confidence             678999999999999999999985321        0    0                                      


Q ss_pred             hhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccC
Q 026540          160 LDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNS  210 (237)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~  210 (237)
                          .......+...+..+.+||.+||+.||.+|||++|+++||||.....
T Consensus       256 ----~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~hp~~~~~~~  302 (320)
T 3a99_A          256 ----IRGQVFFRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLL  302 (320)
T ss_dssp             ----HHCCCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSCCC
T ss_pred             ----hcccccccccCCHHHHHHHHHHccCChhhCcCHHHHhcCHhhcCccC
Confidence                00011122334678899999999999999999999999999997653

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=99.97  E-value=9.7e-31  Score=212.01  Aligned_cols=157  Identities=21%  Similarity=0.322  Sum_probs=126.0

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccC-CCCcEEEeecCcceecCc-CcccCcCCCcccchHHhhhcCC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDG-IDMRCKVVDFGNACRANK-QFAEEIQTRQYRAPEVILRAGY   80 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~-~~~~~kl~dfg~~~~~~~-~~~~~~~~~~~~~PE~~~~~~~   80 (237)
                      +++.++..++.|++.||.|+|..+++|+||||+||+++ .++.++|+|||++..... ......++..|++||.+.+..+
T Consensus       136 ~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  215 (312)
T 2iwi_A          136 LGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEPYTDFDGTRVYSPPEWISRHQY  215 (312)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHTEECCCCSGGGEEEETTTTEEEECCCSSCEECCSSCBCCCCSCTTTSCHHHHHHSCB
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCeeecCCChhhEEEeCCCCeEEEEEcchhhhcccCcccccCCcccccCceeeecCCC
Confidence            67889999999999999999999999999999999998 789999999999876543 3345578899999999988776


Q ss_pred             C-chhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCc
Q 026540           81 S-FSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWS  159 (237)
Q Consensus        81 ~-~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (237)
                      . .++|+||+|++++++++|..||....        .    +                                      
T Consensus       216 ~~~~~Di~slG~il~~l~~g~~pf~~~~--------~----~--------------------------------------  245 (312)
T 2iwi_A          216 HALPATVWSLGILLYDMVCGDIPFERDQ--------E----I--------------------------------------  245 (312)
T ss_dssp             CHHHHHHHHHHHHHHHHHHSSCSCCSHH--------H----H--------------------------------------
T ss_pred             CCccchHHHHHHHHHHHHHCCCCCCChH--------H----H--------------------------------------
Confidence            4 58999999999999999999985320        0    0                                      


Q ss_pred             hhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccCCcc
Q 026540          160 LDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNSTRD  213 (237)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~~~~  213 (237)
                          .......+...+..+.+||.+||+.||.+|||++|+++||||.......+
T Consensus       246 ----~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~~~~~~~~~~~~  295 (312)
T 2iwi_A          246 ----LEAELHFPAHVSPDCCALIRRCLAPKPSSRPSLEEILLDPWMQTPAEDVP  295 (312)
T ss_dssp             ----HHTCCCCCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHHSTTTCC------
T ss_pred             ----hhhccCCcccCCHHHHHHHHHHccCChhhCcCHHHHhcChhhcCchhccc
Confidence                00111223345678899999999999999999999999999997655444

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=99.97  E-value=3.8e-31  Score=215.17  Aligned_cols=182  Identities=20%  Similarity=0.221  Sum_probs=133.5

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCcccc----CCCCcEEEeecCcceecCc--CcccCcCCCcccchHHhh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLD----GIDMRCKVVDFGNACRANK--QFAEEIQTRQYRAPEVIL   76 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili----~~~~~~kl~dfg~~~~~~~--~~~~~~~~~~~~~PE~~~   76 (237)
                      +++.++..++.|++.||.|+|..+++||||||+||++    +.++.+||+|||++.....  ......+++.|+|||++.
T Consensus       109 ~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~  188 (319)
T 4euu_A          109 LPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMYE  188 (319)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEECTTSCEEEEECCCTTCEECCTTCCBCCCCSCGGGCCHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEeccCCCCceEEEccCCCceecCCCCceeecccCCCccCHHHhh
Confidence            7889999999999999999999999999999999999    7788899999999976543  233457899999999987


Q ss_pred             --------hcCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCc
Q 026540           77 --------RAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGD  148 (237)
Q Consensus        77 --------~~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (237)
                              +..++.++|+||+|++++++++|..||.+..     ........+..+....|...+.........      
T Consensus       189 ~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~-----~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~------  257 (319)
T 4euu_A          189 RAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFE-----GPRRNKEVMYKIITGKPSGAISGVQKAENG------  257 (319)
T ss_dssp             HHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTT-----CGGGCHHHHHHHHHHCCTTCCEEEECSTTC------
T ss_pred             hccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC-----ccchhHHHHHHHhcCCCcccchhhhcccCC------
Confidence                    3568899999999999999999999997653     222233333344332222211111000000      


Q ss_pred             cchhccccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCC
Q 026540          149 LKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHP  203 (237)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp  203 (237)
                              ..................+..+.+||.+||+.||++|||++|+|+||
T Consensus       258 --------~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~  304 (319)
T 4euu_A          258 --------PIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAET  304 (319)
T ss_dssp             --------CEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHH
T ss_pred             --------ccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhcc
Confidence                    00000111122345667788999999999999999999999999986

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=99.97  E-value=2.9e-31  Score=223.64  Aligned_cols=164  Identities=23%  Similarity=0.260  Sum_probs=120.2

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCC---CcEEEeecCcceecCcC--cccCcCCCcccchHHhhh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGID---MRCKVVDFGNACRANKQ--FAEEIQTRQYRAPEVILR   77 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~---~~~kl~dfg~~~~~~~~--~~~~~~~~~~~~PE~~~~   77 (237)
                      +++.++..++.|++.||.|+|..+++||||||+|||++.+   ..+||+|||++......  .....|++.|+|||++.+
T Consensus       236 ~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~  315 (419)
T 3i6u_A          236 LKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVS  315 (419)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSSSCCEEECCSSTTTSCC-----------CTTCCTTTTC-
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCCCcceEEEeecccceecCCCccccccCCCCCccCceeeec
Confidence            6789999999999999999999999999999999999754   45999999999765432  335578999999999864


Q ss_pred             ---cCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcc
Q 026540           78 ---AGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRR  154 (237)
Q Consensus        78 ---~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (237)
                         ..++.++|+||+|++++++++|..||......     ......+........                         
T Consensus       316 ~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~-----~~~~~~i~~~~~~~~-------------------------  365 (419)
T 3i6u_A          316 VGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQ-----VSLKDQITSGKYNFI-------------------------  365 (419)
T ss_dssp             ---CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSS-----CCHHHHHHTTCCCCC-------------------------
T ss_pred             CCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcch-----HHHHHHHhcCCCCCC-------------------------
Confidence               46788999999999999999999999754311     000000000000000                         


Q ss_pred             ccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCccc
Q 026540          155 LKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRN  209 (237)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~  209 (237)
                            ..       .....+..+.+||.+||+.||.+|||++|+|+||||....
T Consensus       366 ------~~-------~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~~~~~~  407 (419)
T 3i6u_A          366 ------PE-------VWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDED  407 (419)
T ss_dssp             ------HH-------HHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGCCHH
T ss_pred             ------ch-------hhcccCHHHHHHHHHHccCChhHCcCHHHHhCCcccCChh
Confidence                  00       0112467889999999999999999999999999998654

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.97  E-value=6.5e-31  Score=225.90  Aligned_cols=162  Identities=24%  Similarity=0.313  Sum_probs=128.3

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCC---CCcEEEeecCcceecCc--CcccCcCCCcccchHHhh
Q 026540            2 TIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGI---DMRCKVVDFGNACRANK--QFAEEIQTRQYRAPEVIL   76 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~---~~~~kl~dfg~~~~~~~--~~~~~~~~~~~~~PE~~~   76 (237)
                      .+++.++..++.|++.||.|+|..+++||||||+|||++.   ++.+||+|||++.....  ......|++.|+|||++.
T Consensus       132 ~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~l~  211 (494)
T 3lij_A          132 KFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEVLR  211 (494)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBTTBCBCCCCSCTTTCCHHHHT
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCceeccCChhhEEEeCCCCCCcEEEEECCCCeECCCCccccccCCCcCeeCHHHHc
Confidence            3678899999999999999999999999999999999976   45599999999876542  334567899999999875


Q ss_pred             hcCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcccc
Q 026540           77 RAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLK  156 (237)
Q Consensus        77 ~~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (237)
                       ..++.++|+||+||+++++++|..||.+..      ....+..+......++..                         
T Consensus       212 -~~~~~~~DiwslG~il~~ll~g~~pf~~~~------~~~~~~~i~~~~~~~~~~-------------------------  259 (494)
T 3lij_A          212 -KKYDEKCDVWSIGVILFILLAGYPPFGGQT------DQEILRKVEKGKYTFDSP-------------------------  259 (494)
T ss_dssp             -TCBCTHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHTCCCCCSG-------------------------
T ss_pred             -ccCCCchhHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHhCCCCCCch-------------------------
Confidence             568999999999999999999999997653      333333222211110000                         


Q ss_pred             CCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcc
Q 026540          157 FWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLR  208 (237)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~  208 (237)
                                   .....+..+.+||.+||+.||.+|||++|+|+||||+..
T Consensus       260 -------------~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~hp~~~~~  298 (494)
T 3lij_A          260 -------------EWKNVSEGAKDLIKQMLQFDSQRRISAQQALEHPWIKEM  298 (494)
T ss_dssp             -------------GGTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTCHHHHHH
T ss_pred             -------------hcccCCHHHHHHHHHHCCCChhhCccHHHHhcCcccccC
Confidence                         011346788999999999999999999999999999865

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=99.97  E-value=1.1e-30  Score=209.31  Aligned_cols=159  Identities=24%  Similarity=0.282  Sum_probs=120.4

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCcccc---CCCCcEEEeecCcceecCc--CcccCcCCCcccchHHhhh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLD---GIDMRCKVVDFGNACRANK--QFAEEIQTRQYRAPEVILR   77 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili---~~~~~~kl~dfg~~~~~~~--~~~~~~~~~~~~~PE~~~~   77 (237)
                      +++..+..++.|++.||.|+|..+++||||||+||++   +.++.++|+|||++.....  ......+++.|+|||.+. 
T Consensus       121 ~~~~~~~~i~~qi~~~L~~LH~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~-  199 (285)
T 3is5_A          121 LSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAAGTALYMAPEVFK-  199 (285)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC----------CTTGGGCCHHHHT-
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCEEECCCCHHHEEEecCCCCCCEEEEeeecceecCCcccCcCcccccCcCChHHhc-
Confidence            6788999999999999999999999999999999999   4567899999999865432  234557789999999875 


Q ss_pred             cCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccC
Q 026540           78 AGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKF  157 (237)
Q Consensus        78 ~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (237)
                      ..++.++|+||+|++++++++|..||.+..      ........ ... ...                            
T Consensus       200 ~~~~~~~Di~slG~il~~ll~g~~pf~~~~------~~~~~~~~-~~~-~~~----------------------------  243 (285)
T 3is5_A          200 RDVTFKCDIWSAGVVMYFLLTGCLPFTGTS------LEEVQQKA-TYK-EPN----------------------------  243 (285)
T ss_dssp             TCCCHHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHH-HHC-CCC----------------------------
T ss_pred             cCCCcccCeehHHHHHHHHHhCCCCCCCCC------HHHHHhhh-ccC-Ccc----------------------------
Confidence            568899999999999999999999997652      11111111 000 000                            


Q ss_pred             CchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCc
Q 026540          158 WSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSL  207 (237)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~  207 (237)
                               ........++.+.+|+.+||+.||.+|||++|+++||||++
T Consensus       244 ---------~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~f~~  284 (285)
T 3is5_A          244 ---------YAVECRPLTPQAVDLLKQMLTKDPERRPSAAQVLHHEWFKQ  284 (285)
T ss_dssp             ---------CCC--CCCCHHHHHHHHHHTCSCTTTSCCHHHHHTSGGGGC
T ss_pred             ---------cccccCcCCHHHHHHHHHHccCChhhCcCHHHHhcCHHhhc
Confidence                     00001113577889999999999999999999999999974

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=99.97  E-value=7.2e-31  Score=216.18  Aligned_cols=160  Identities=23%  Similarity=0.230  Sum_probs=128.5

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcCcccCcCCCcccchHHhh---hcC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVIL---RAG   79 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~PE~~~---~~~   79 (237)
                      +++.++..++.|++.||.|+|..+++||||||+|||++.++.+||+|||++..... .....|++.|+|||++.   ...
T Consensus       151 l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~-~~~~~gt~~y~aPE~~~~~~~~~  229 (348)
T 1u5q_A          151 LQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP-ANSFVGTPYWMAPEVILAMDEGQ  229 (348)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSS-BCCCCSCGGGCCHHHHHTTSSCC
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEeeccCceecCC-CCcccCCcceeCHhhhccccCCC
Confidence            57889999999999999999999999999999999999999999999999866543 33567899999999996   356


Q ss_pred             CCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCc
Q 026540           80 YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWS  159 (237)
Q Consensus        80 ~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (237)
                      ++.++|+||+|++++++++|..||....      ....+..+...  ..+                              
T Consensus       230 ~~~~~DiwslG~il~ell~g~~p~~~~~------~~~~~~~~~~~--~~~------------------------------  271 (348)
T 1u5q_A          230 YDGKVDVWSLGITCIELAERKPPLFNMN------AMSALYHIAQN--ESP------------------------------  271 (348)
T ss_dssp             BCTHHHHHHHHHHHHHHHHSSCTTTTSC------HHHHHHHHHHS--CCC------------------------------
T ss_pred             CCcHHHHHHHHHHHHHHHhCCCCCCCCC------hHHHHHHHHhc--CCC------------------------------
Confidence            8899999999999999999999997653      22222211110  000                              


Q ss_pred             hhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCccc
Q 026540          160 LDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRN  209 (237)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~  209 (237)
                              .......+..+.+||.+||+.||.+|||++++++||||....
T Consensus       272 --------~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~h~~~~~~~  313 (348)
T 1u5q_A          272 --------ALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRER  313 (348)
T ss_dssp             --------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTCHHHHSCC
T ss_pred             --------CCCCCCCCHHHHHHHHHHcccChhhCcCHHHHhhChhhhccC
Confidence                    001223457789999999999999999999999999997654

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.97  E-value=1.5e-30  Score=224.22  Aligned_cols=163  Identities=23%  Similarity=0.244  Sum_probs=129.8

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCC---cEEEeecCcceecCc--CcccCcCCCcccchHHhhh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDM---RCKVVDFGNACRANK--QFAEEIQTRQYRAPEVILR   77 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~---~~kl~dfg~~~~~~~--~~~~~~~~~~~~~PE~~~~   77 (237)
                      +++..+..++.|++.||.|+|..+++||||||+||+++.++   .+||+|||++.....  ......|++.|+|||++. 
T Consensus       143 ~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~-  221 (504)
T 3q5i_A          143 FDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEVLK-  221 (504)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESSTTCCSSEEECCCTTCEECCTTSCBCCCCSCTTTCCHHHHT-
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCeEeCCCcHHHEEEecCCCCccEEEEECCCCEEcCCCCccccccCCcCCCCHHHhc-
Confidence            67899999999999999999999999999999999998765   699999999976543  334567899999999976 


Q ss_pred             cCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccC
Q 026540           78 AGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKF  157 (237)
Q Consensus        78 ~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (237)
                      ..++.++|+||+|++++++++|..||.+..      ....+..+.......+...                         
T Consensus       222 ~~~~~~~DiwslG~il~~ll~g~~pf~~~~------~~~~~~~i~~~~~~~~~~~-------------------------  270 (504)
T 3q5i_A          222 KKYNEKCDVWSCGVIMYILLCGYPPFGGQN------DQDIIKKVEKGKYYFDFND-------------------------  270 (504)
T ss_dssp             TCBCTHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHCCCCCCHHH-------------------------
T ss_pred             cCCCchHHHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHcCCCCCCccc-------------------------
Confidence            568999999999999999999999997653      3333333221110000000                         


Q ss_pred             CchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccC
Q 026540          158 WSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNS  210 (237)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~  210 (237)
                                   ....+..+.+||.+||+.||.+|||++|+|+||||+....
T Consensus       271 -------------~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~~~  310 (504)
T 3q5i_A          271 -------------WKNISDEAKELIKLMLTYDYNKRCTAEEALNSRWIKKYAN  310 (504)
T ss_dssp             -------------HTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHHTCC
T ss_pred             -------------cCCCCHHHHHHHHHHcCCChhHCCCHHHHhcCHhhhhchh
Confidence                         0124678999999999999999999999999999986643

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=99.97  E-value=1e-30  Score=209.76  Aligned_cols=160  Identities=16%  Similarity=0.187  Sum_probs=124.0

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhc--CCccCCCCCccccC-CCCcEEEeecCcceecCcC-cccCcCCCcccchHHhhhc
Q 026540            3 IVEKKLKRRAKRAVANISIRRASM--GGIELPKPERCLDG-IDMRCKVVDFGNACRANKQ-FAEEIQTRQYRAPEVILRA   78 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~--~~h~d~kp~Nili~-~~~~~kl~dfg~~~~~~~~-~~~~~~~~~~~~PE~~~~~   78 (237)
                      +++..+..++.|++.||.|+|..+  ++|+||||+||+++ .++.++|+|||++...... .....+++.|+|||.+. .
T Consensus       126 ~~~~~~~~~~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~t~~y~aPE~~~-~  204 (290)
T 1t4h_A          126 MKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAVIGTPEFMAPEMYE-E  204 (290)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCTTSBEESCSSCCCCCGGGGG-T
T ss_pred             CCHHHHHHHHHHHHHHHHHHHcCCCCEEECCCCHHHEEEECCCCCEEEeeCCCcccccccccccccCCcCcCCHHHHh-c
Confidence            578889999999999999999999  99999999999997 7889999999998654332 33457899999999875 5


Q ss_pred             CCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCC
Q 026540           79 GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFW  158 (237)
Q Consensus        79 ~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (237)
                      .++.++|+||+|++++++++|..||....     ........+   .....                             
T Consensus       205 ~~~~~~Di~slG~~l~~l~~g~~pf~~~~-----~~~~~~~~~---~~~~~-----------------------------  247 (290)
T 1t4h_A          205 KYDESVDVYAFGMCMLEMATSEYPYSECQ-----NAAQIYRRV---TSGVK-----------------------------  247 (290)
T ss_dssp             CCCTHHHHHHHHHHHHHHHHSSCTTTTCS-----SHHHHHHHH---TTTCC-----------------------------
T ss_pred             cCCCcchHHHHHHHHHHHHhCCCCCCCcC-----cHHHHHHHH---hccCC-----------------------------
Confidence            58999999999999999999999997542     111111110   00000                             


Q ss_pred             chhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcc
Q 026540          159 SLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLR  208 (237)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~  208 (237)
                              ....+...++.+.+||.+||+.||.+|||++|+++||||++.
T Consensus       248 --------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~~f~~~  289 (290)
T 1t4h_A          248 --------PASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQEE  289 (290)
T ss_dssp             --------CGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGC--
T ss_pred             --------ccccCCCCCHHHHHHHHHHccCChhhCCCHHHHhhCcccccC
Confidence                    000112234678999999999999999999999999999853

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=99.97  E-value=7.8e-31  Score=214.84  Aligned_cols=160  Identities=21%  Similarity=0.297  Sum_probs=131.2

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecC---cCcccCcCCCcccchHHhhhcC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRAN---KQFAEEIQTRQYRAPEVILRAG   79 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~---~~~~~~~~~~~~~~PE~~~~~~   79 (237)
                      +++.++..++.|++.||.|+|..+++|+||||+||+++.++.++|+|||++....   .......++..|++||.+.+..
T Consensus       138 l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~  217 (335)
T 2owb_A          138 LTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKG  217 (335)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECCSTTCCBCCCCSCCSSCCHHHHHTSC
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCCEecCCCchhEEEcCCCCEEEeeccCceecccCcccccccCCCccccCHHHhccCC
Confidence            6788999999999999999999999999999999999999999999999987543   2233457889999999999888


Q ss_pred             CCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCc
Q 026540           80 YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWS  159 (237)
Q Consensus        80 ~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (237)
                      ++.++|+||+|++++++++|..||....      .......+                                      
T Consensus       218 ~~~~~Di~slG~il~~l~~g~~pf~~~~------~~~~~~~~--------------------------------------  253 (335)
T 2owb_A          218 HSFEVDVWSIGCIMYTLLVGKPPFETSC------LKETYLRI--------------------------------------  253 (335)
T ss_dssp             BCTHHHHHHHHHHHHHHHHSSCTTCCSS------HHHHHHHH--------------------------------------
T ss_pred             CCchhhHHHHHHHHHHHHHCcCCCCCCC------HHHHHHHH--------------------------------------
Confidence            9999999999999999999999996542      11111111                                      


Q ss_pred             hhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccC
Q 026540          160 LDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNS  210 (237)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~  210 (237)
                          .......+...+..+.+||.+||+.||.+|||++|+++||||.....
T Consensus       254 ----~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~~~~~~~~~~  300 (335)
T 2owb_A          254 ----KKNEYSIPKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYI  300 (335)
T ss_dssp             ----HHTCCCCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHTSCC
T ss_pred             ----hcCCCCCCccCCHHHHHHHHHHccCChhHCcCHHHHhcCccccCCCc
Confidence                01112233345678899999999999999999999999999986643

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=99.97  E-value=1.8e-30  Score=206.65  Aligned_cols=164  Identities=20%  Similarity=0.164  Sum_probs=128.5

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCc-----CcccCcCCCcccchHHhh
Q 026540            2 TIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK-----QFAEEIQTRQYRAPEVIL   76 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~-----~~~~~~~~~~~~~PE~~~   76 (237)
                      .+++.++..++.|++.||.|+|..+++|+||||+||+++.++.++|+|||.+.....     ......+++.|+|||.+.
T Consensus       101 ~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  180 (276)
T 2yex_A          101 GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK  180 (276)
T ss_dssp             BCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEECCBCCCCSCGGGCCGGGGT
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCeeccCCChHHEEEccCCCEEEeeCCCccccCCCcchhcccCCccccCccChHHHh
Confidence            367889999999999999999999999999999999999999999999999865431     233457789999999998


Q ss_pred             hcCC-CchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccc
Q 026540           77 RAGY-SFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRL  155 (237)
Q Consensus        77 ~~~~-~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (237)
                      +..+ +.++|+||+|++++++++|..||.....     ..........   ..                           
T Consensus       181 ~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-----~~~~~~~~~~---~~---------------------------  225 (276)
T 2yex_A          181 RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD-----SCQEYSDWKE---KK---------------------------  225 (276)
T ss_dssp             CSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCT-----TSHHHHHHHT---TC---------------------------
T ss_pred             cCCCCCCcchHHHHHHHHHHHHhCCCCCCCCch-----HHHHHHHhhh---cc---------------------------
Confidence            7765 6789999999999999999999976531     1111110000   00                           


Q ss_pred             cCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccC
Q 026540          156 KFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNS  210 (237)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~  210 (237)
                                .........+..+.+||.+||+.||.+|||++|+++||||.....
T Consensus       226 ----------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~~~  270 (276)
T 2yex_A          226 ----------TYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKPLK  270 (276)
T ss_dssp             ----------TTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTTTTCCCC
T ss_pred             ----------cccCchhhcCHHHHHHHHHHCCCCchhCCCHHHHhcCccccChhh
Confidence                      000011234678889999999999999999999999999986644

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=99.97  E-value=8.1e-31  Score=210.77  Aligned_cols=162  Identities=21%  Similarity=0.292  Sum_probs=131.7

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecC---cCcccCcCCCcccchHHhhhcC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRAN---KQFAEEIQTRQYRAPEVILRAG   79 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~---~~~~~~~~~~~~~~PE~~~~~~   79 (237)
                      +++.++..++.|++.||.|+|..+++|+||||+||+++.++.++|+|||++....   .......+++.|+|||.+.+..
T Consensus       112 ~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  191 (294)
T 2rku_A          112 LTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKG  191 (294)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCSTTCCBCCCCSCCSSCCHHHHTTSC
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEcCCCCEEEEeccCceecccCccccccccCCCCcCCcchhccCC
Confidence            6788999999999999999999999999999999999999999999999987543   2233456789999999998888


Q ss_pred             CCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCc
Q 026540           80 YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWS  159 (237)
Q Consensus        80 ~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (237)
                      ++.++|+||+|++++++++|..||....      .......+                                      
T Consensus       192 ~~~~~Di~slG~~l~~l~~g~~p~~~~~------~~~~~~~~--------------------------------------  227 (294)
T 2rku_A          192 HSFEVDVWSIGCIMYTLLVGKPPFETSC------LKETYLRI--------------------------------------  227 (294)
T ss_dssp             BCTHHHHHHHHHHHHHHHHSSCTTCCSS------HHHHHHHH--------------------------------------
T ss_pred             CCchhhHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHH--------------------------------------
Confidence            9999999999999999999999997542      11111111                                      


Q ss_pred             hhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccCCc
Q 026540          160 LDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNSTR  212 (237)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~~~  212 (237)
                          .......+...+..+.+++.+||+.||.+|||++|+++||||.......
T Consensus       228 ----~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~~~~~~~~~~~  276 (294)
T 2rku_A          228 ----KKNEYSIPKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIPA  276 (294)
T ss_dssp             ----HTTCCCCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHTSCCCS
T ss_pred             ----hhccCCCccccCHHHHHHHHHHcccChhhCcCHHHHhhChheecCCcCC
Confidence                0011122334567889999999999999999999999999998765433

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=99.97  E-value=7.2e-31  Score=209.81  Aligned_cols=166  Identities=20%  Similarity=0.320  Sum_probs=128.5

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCC----cEEEeecCcceecCc--CcccCcCCCcccchHHhh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDM----RCKVVDFGNACRANK--QFAEEIQTRQYRAPEVIL   76 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~----~~kl~dfg~~~~~~~--~~~~~~~~~~~~~PE~~~   76 (237)
                      +++.++..++.|++.||.|+|..+++|+||||+||+++.++    .++|+|||++.....  ......+++.|+|||.+.
T Consensus       105 ~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~  184 (283)
T 3bhy_A          105 LTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVN  184 (283)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSSSSCCEEECCCTTCEECC--------CCCGGGCCHHHHT
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCccCCCCChHHEEEecCCCCCCceEEEecccceeccCCCcccccCCCcCccCcceec
Confidence            67889999999999999999999999999999999998876    899999999876542  233456789999999998


Q ss_pred             hcCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcccc
Q 026540           77 RAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLK  156 (237)
Q Consensus        77 ~~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (237)
                      +..++.++|+||+|++++++++|..||....      ....+..+.......+..                         
T Consensus       185 ~~~~~~~~Di~slG~il~~l~~g~~p~~~~~------~~~~~~~~~~~~~~~~~~-------------------------  233 (283)
T 3bhy_A          185 YEPLGLEADMWSIGVITYILLSGASPFLGET------KQETLTNISAVNYDFDEE-------------------------  233 (283)
T ss_dssp             TCCCCTHHHHHHHHHHHHHHHHSSCTTCCSS------HHHHHHHHHTTCCCCCHH-------------------------
T ss_pred             CCCCCcchhhhhHHHHHHHHHHCCCCCCCcc------hHHHHHHhHhcccCCcch-------------------------
Confidence            8889999999999999999999999997652      222222221110000000                         


Q ss_pred             CCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccCCc
Q 026540          157 FWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNSTR  212 (237)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~~~  212 (237)
                                   .....+..+.+|+.+||..||.+|||+.|+++||||.......
T Consensus       234 -------------~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~~~~  276 (283)
T 3bhy_A          234 -------------YFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIRRRN  276 (283)
T ss_dssp             -------------HHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHHHHCC
T ss_pred             -------------hcccCCHHHHHHHHHHccCCHhHCcCHHHHHhCHHHHHHHHHh
Confidence                         0112356789999999999999999999999999999765433

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=99.97  E-value=7.4e-31  Score=212.03  Aligned_cols=164  Identities=22%  Similarity=0.313  Sum_probs=130.2

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCcccc---CCCCcEEEeecCcceecCc-CcccCcCCCcccchHHhhhc
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLD---GIDMRCKVVDFGNACRANK-QFAEEIQTRQYRAPEVILRA   78 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili---~~~~~~kl~dfg~~~~~~~-~~~~~~~~~~~~~PE~~~~~   78 (237)
                      +++.++..++.|++.||.|+|..+++|+||||+||++   +.++.++|+|||++..... ......+++.|+|||.+.+.
T Consensus       103 ~~~~~~~~~~~qi~~~l~~lH~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~  182 (304)
T 2jam_A          103 YTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMSTACGTPGYVAPEVLAQK  182 (304)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCBTTHHHHSCCCBCCTTTBSSC
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEecCCCCCCEEEccCCcceecCCCccccccCCCCccChHHhccC
Confidence            5788999999999999999999999999999999999   6788999999999865432 22344678999999999888


Q ss_pred             CCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCC
Q 026540           79 GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFW  158 (237)
Q Consensus        79 ~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (237)
                      .++.++|+||+|++++++++|..||....      .......+.+.....                              
T Consensus       183 ~~~~~~Di~slG~il~~l~~g~~pf~~~~------~~~~~~~i~~~~~~~------------------------------  226 (304)
T 2jam_A          183 PYSKAVDCWSIGVITYILLCGYPPFYEET------ESKLFEKIKEGYYEF------------------------------  226 (304)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHSSCTTTTSC------HHHHHHHHHHCCCCC------------------------------
T ss_pred             CCCchhhHHHHHHHHHHHHHCCCCCCCCC------HHHHHHHHHcCCCCC------------------------------
Confidence            89999999999999999999999997652      222222221110000                              


Q ss_pred             chhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccC
Q 026540          159 SLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNS  210 (237)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~  210 (237)
                              ........+..+.+||.+||..||.+|||++|+++||||.....
T Consensus       227 --------~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~~  270 (304)
T 2jam_A          227 --------ESPFWDDISESAKDFICHLLEKDPNERYTCEKALSHPWIDGNTA  270 (304)
T ss_dssp             --------CTTTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSHHHHSSCS
T ss_pred             --------CccccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCccccCCCc
Confidence                    00112334678999999999999999999999999999986543

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=99.96  E-value=1.5e-30  Score=210.11  Aligned_cols=160  Identities=17%  Similarity=0.218  Sum_probs=128.6

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCc-----CcccCcCCCcccchHHhhh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK-----QFAEEIQTRQYRAPEVILR   77 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~-----~~~~~~~~~~~~~PE~~~~   77 (237)
                      +++.++..++.|++.||.|+|..+++|+||||+||+++.++.++|+|||++.....     ......+++.|++||++.+
T Consensus       106 ~~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  185 (305)
T 2wtk_C          106 FPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSPAFQPPEIANG  185 (305)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECCTTCSSCEECCCCSCGGGCCHHHHTC
T ss_pred             cCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEcCCCcEEeeccccccccCccccccccccCCCCCCCcChhhccC
Confidence            67889999999999999999999999999999999999999999999999865432     1234467899999999986


Q ss_pred             cC--CCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccc
Q 026540           78 AG--YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRL  155 (237)
Q Consensus        78 ~~--~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (237)
                      ..  ++.++|+||+|++++++++|..||.+..      .......+.                                 
T Consensus       186 ~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~------~~~~~~~i~---------------------------------  226 (305)
T 2wtk_C          186 LDTFSGFKVDIWSAGVTLYNITTGLYPFEGDN------IYKLFENIG---------------------------------  226 (305)
T ss_dssp             CSCEESHHHHHHHHHHHHHHHHHSSCSCCCSS------HHHHHHHHH---------------------------------
T ss_pred             cccCCcchhhHHHHHHHHHHHHhCCCCCCCch------HHHHHHHHh---------------------------------
Confidence            54  3779999999999999999999997542      111111110                                 


Q ss_pred             cCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccC
Q 026540          156 KFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNS  210 (237)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~  210 (237)
                               ......+..++..+.+||.+||+.||.+|||++|+++||||.....
T Consensus       227 ---------~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~~~~~~~  272 (305)
T 2wtk_C          227 ---------KGSYAIPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQHSWFRKKHP  272 (305)
T ss_dssp             ---------HCCCCCCSSSCHHHHHHHHHHTCSSTTTSCCHHHHHHSHHHHSCCC
T ss_pred             ---------cCCCCCCCccCHHHHHHHHHHccCChhhCCCHHHHhcCcccccCCC
Confidence                     1111233345678899999999999999999999999999986543

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=99.96  E-value=1.1e-30  Score=208.80  Aligned_cols=156  Identities=21%  Similarity=0.201  Sum_probs=121.2

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCC-------------------CCcEEEeecCcceecCcCcccC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGI-------------------DMRCKVVDFGNACRANKQFAEE   63 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~-------------------~~~~kl~dfg~~~~~~~~~~~~   63 (237)
                      +++.++..++.|++.||.|+|..+++||||||+||+++.                   ...++|+|||.+....... ..
T Consensus       112 ~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~-~~  190 (289)
T 1x8b_A          112 FKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQ-VE  190 (289)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC--------------------CCCEEECCCTTCEETTCSC-CC
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCEeecCCCHHHEEEcCCCCCcccccccccccccCCceEEEEcccccccccCCcc-cc
Confidence            678899999999999999999999999999999999984                   3479999999987665433 34


Q ss_pred             cCCCcccchHHhhhc-CCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhh
Q 026540           64 IQTRQYRAPEVILRA-GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDY  142 (237)
Q Consensus        64 ~~~~~~~~PE~~~~~-~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  142 (237)
                      .+++.|+|||.+.+. .++.++|+||+|++++++++|..++...         .....+..  +.               
T Consensus       191 ~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~---------~~~~~~~~--~~---------------  244 (289)
T 1x8b_A          191 EGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNG---------DQWHEIRQ--GR---------------  244 (289)
T ss_dssp             CCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSS---------HHHHHHHT--TC---------------
T ss_pred             CCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcch---------hHHHHHHc--CC---------------
Confidence            689999999999876 4668999999999999999998765432         11111100  00               


Q ss_pred             hcccCccchhccccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCccc
Q 026540          143 FDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRN  209 (237)
Q Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~  209 (237)
                                              ....+...+..+.+|+.+||+.||.+|||+.|+++||||....
T Consensus       245 ------------------------~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~  287 (289)
T 1x8b_A          245 ------------------------LPRIPQVLSQEFTELLKVMIHPDPERRPSAMALVKHSVLLSAS  287 (289)
T ss_dssp             ------------------------CCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTCTTC----
T ss_pred             ------------------------CCCCCcccCHHHHHHHHHHhCCCcccCCCHHHHhhChHhhhhc
Confidence                                    0112334567899999999999999999999999999998643

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=99.96  E-value=4.2e-30  Score=206.79  Aligned_cols=164  Identities=26%  Similarity=0.325  Sum_probs=129.1

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCc--CcccCcCCCcccchHHhhh---
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK--QFAEEIQTRQYRAPEVILR---   77 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~--~~~~~~~~~~~~~PE~~~~---   77 (237)
                      +++.++..++.|++.||.|+|..+++|+||||+||+++.++.++|+|||++.....  ......+++.|+|||++.+   
T Consensus       121 ~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  200 (298)
T 1phk_A          121 LSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMN  200 (298)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECCTTCCBCCCCSCGGGCCHHHHHHHHC
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEcCCCcEEEecccchhhcCCCcccccccCCccccCHHHhccccc
Confidence            67889999999999999999999999999999999999999999999999876442  3344577899999999863   


Q ss_pred             ---cCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcc
Q 026540           78 ---AGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRR  154 (237)
Q Consensus        78 ---~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (237)
                         ..++.++|+||+|++++++++|..||....      .......+.......+                         
T Consensus       201 ~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~------~~~~~~~~~~~~~~~~-------------------------  249 (298)
T 1phk_A          201 DNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRK------QMLMLRMIMSGNYQFG-------------------------  249 (298)
T ss_dssp             TTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHTCCCCC-------------------------
T ss_pred             cccccCCcccccHhHHHHHHHHHHCCCCCcCcc------HHHHHHHHhcCCcccC-------------------------
Confidence               357889999999999999999999997542      2222222211100000                         


Q ss_pred             ccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccC
Q 026540          155 LKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNS  210 (237)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~  210 (237)
                                   .......+..+.+|+.+||+.||.+|||++|+++||||.....
T Consensus       250 -------------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~~  292 (298)
T 1phk_A          250 -------------SPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQYVV  292 (298)
T ss_dssp             -------------TTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGCTTC-
T ss_pred             -------------cccccccCHHHHHHHHHHccCCcccCCCHHHHHhChHhhhccc
Confidence                         0011234678899999999999999999999999999997654

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=99.96  E-value=3.5e-31  Score=217.09  Aligned_cols=172  Identities=23%  Similarity=0.243  Sum_probs=111.5

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCC---CCcEEEeecCcceecCc-CcccCcCCCcccchHHhhh
Q 026540            2 TIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGI---DMRCKVVDFGNACRANK-QFAEEIQTRQYRAPEVILR   77 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~---~~~~kl~dfg~~~~~~~-~~~~~~~~~~~~~PE~~~~   77 (237)
                      .+++.++..++.|++.||.|+|..+++||||||+||+++.   ++.++|+|||++..... ......+++.|+|||++.+
T Consensus       124 ~l~~~~~~~i~~ql~~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~t~~y~aPE~~~~  203 (336)
T 3fhr_A          124 AFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCYTPYYVAPEVLGP  203 (336)
T ss_dssp             CCBHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEEC----------------------
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEEecCCCceEEEeccccceeccccccccCCCCcCccChhhhCC
Confidence            3788999999999999999999999999999999999976   45699999999875543 2334577899999999988


Q ss_pred             cCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccC
Q 026540           78 AGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKF  157 (237)
Q Consensus        78 ~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (237)
                      ..++.++|+||+|++++++++|..||........      ........                                
T Consensus       204 ~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~------~~~~~~~~--------------------------------  245 (336)
T 3fhr_A          204 EKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAI------SPGMKRRI--------------------------------  245 (336)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHSSCCC------------------------------------------------------
T ss_pred             CCCCchhhHHHHHHHHHHHHHCCCCCCCccchhh------hhhHHHhh--------------------------------
Confidence            8888999999999999999999999976531100      00000000                                


Q ss_pred             CchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccCCcc
Q 026540          158 WSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNSTRD  213 (237)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~~~~  213 (237)
                        ...............+..+.+||.+||..||.+|||++|+++||||.+......
T Consensus       246 --~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~~~~  299 (336)
T 3fhr_A          246 --RLGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQSMVVPQ  299 (336)
T ss_dssp             -------CCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHHTGGGSCC
T ss_pred             --hccccccCchhhccCCHHHHHHHHHHCCCChhHCcCHHHHhcCccccccccCCC
Confidence              000000000111245678999999999999999999999999999997654443

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=99.96  E-value=5.6e-30  Score=205.71  Aligned_cols=163  Identities=23%  Similarity=0.283  Sum_probs=126.4

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCC-CCcEEEeecCcceecCc---CcccCcCCCcccchHHhhhc
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGI-DMRCKVVDFGNACRANK---QFAEEIQTRQYRAPEVILRA   78 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~-~~~~kl~dfg~~~~~~~---~~~~~~~~~~~~~PE~~~~~   78 (237)
                      +++..+..++.|++.||.|+|..+++|+||||+||+++. ++.++|+|||++.....   ......+++.|+|||++.+.
T Consensus       119 ~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  198 (295)
T 2clq_A          119 DNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKG  198 (295)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTCCEEECCTTTCEESCC-----CCCCCCGGGCCHHHHHHG
T ss_pred             ccHHHHHHHHHHHHHHHHHHHhCCEEccCCChhhEEEECCCCCEEEeecccccccCCCCCcccccCCCccccChhhhcCC
Confidence            467888999999999999999999999999999999987 88999999999876542   22345778999999999875


Q ss_pred             C--CCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcccc
Q 026540           79 G--YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLK  156 (237)
Q Consensus        79 ~--~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (237)
                      .  ++.++|+||+|++++++++|..||....     ......... ...                               
T Consensus       199 ~~~~~~~~Di~slG~il~~l~~g~~pf~~~~-----~~~~~~~~~-~~~-------------------------------  241 (295)
T 2clq_A          199 PRGYGKAADIWSLGCTIIEMATGKPPFYELG-----EPQAAMFKV-GMF-------------------------------  241 (295)
T ss_dssp             GGGCSHHHHHHHHHHHHHHHHHTSCTTGGGS-----SHHHHHHHH-HHH-------------------------------
T ss_pred             CCCCCcHHHHHHHHHHHHHHHHCCCCccCCC-----chhHHHHhh-ccc-------------------------------
Confidence            4  7899999999999999999999996532     111111000 000                               


Q ss_pred             CCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccC
Q 026540          157 FWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNS  210 (237)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~  210 (237)
                              ......+...+..+.+|+.+||+.||++|||++++++||||.....
T Consensus       242 --------~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~~~~~~~~~  287 (295)
T 2clq_A          242 --------KVHPEIPESMSAEAKAFILKCFEPDPDKRACANDLLVDEFLKVSSK  287 (295)
T ss_dssp             --------CCCCCCCTTSCHHHHHHHHHTTCSSTTTSCCHHHHHTSGGGCC---
T ss_pred             --------cccccccccCCHHHHHHHHHHccCChhhCCCHHHHhcChhhhhccc
Confidence                    0011223445778999999999999999999999999999996653

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.96  E-value=2.7e-30  Score=208.33  Aligned_cols=164  Identities=23%  Similarity=0.322  Sum_probs=126.3

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecC---cCcccCcCCCcccchHHhh---
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRAN---KQFAEEIQTRQYRAPEVIL---   76 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~---~~~~~~~~~~~~~~PE~~~---   76 (237)
                      +++.++..++.|++.||.|+|..+++|+||||+||+++.++.++|+|||++....   .......+++.|+|||.+.   
T Consensus       114 ~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  193 (302)
T 2j7t_A          114 LTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCET  193 (302)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHHHC-----CCGGGCCHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEECCCCCEEEEECCCCccccccccccccccCChhhcCCeeecccc
Confidence            6788999999999999999999999999999999999999999999999874321   1223456789999999985   


Q ss_pred             --hcCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcc
Q 026540           77 --RAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRR  154 (237)
Q Consensus        77 --~~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (237)
                        ...++.++|+||+|++++++++|..||....      .......+...  ..+                         
T Consensus       194 ~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~------~~~~~~~~~~~--~~~-------------------------  240 (302)
T 2j7t_A          194 MKDTPYDYKADIWSLGITLIEMAQIEPPHHELN------PMRVLLKIAKS--DPP-------------------------  240 (302)
T ss_dssp             TTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSC------HHHHHHHHHHS--CCC-------------------------
T ss_pred             CCCCCCchhhhHHHHHHHHHHHhcCCCCCccCC------HHHHHHHHhcc--CCc-------------------------
Confidence              4467889999999999999999999997542      22221111110  000                         


Q ss_pred             ccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccCC
Q 026540          155 LKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNST  211 (237)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~~  211 (237)
                                  ....+...+..+.++|.+||..||.+|||++++++||||......
T Consensus       241 ------------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~~~  285 (302)
T 2j7t_A          241 ------------TLLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEHPFVSSITSN  285 (302)
T ss_dssp             ------------CCSSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTTSTTTTTCCCC
T ss_pred             ------------ccCCccccCHHHHHHHHHHcccChhhCCCHHHHhcChHHhhhccc
Confidence                        001123346788999999999999999999999999999987654

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=99.96  E-value=1.5e-30  Score=209.77  Aligned_cols=171  Identities=25%  Similarity=0.341  Sum_probs=122.7

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCc--------CcccCcCCCcccchHH
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK--------QFAEEIQTRQYRAPEV   74 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~--------~~~~~~~~~~~~~PE~   74 (237)
                      +++.++..++.|++.||.|+|..+++|+||||+||+++.++.++|+|||++.....        ......+++.|+|||.
T Consensus       118 ~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~  197 (303)
T 2vwi_A          118 LDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEV  197 (303)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTCCEEECCCHHHHHCC---------------CCCTTCCHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCCCCCCCChhhEEEcCCCCEEEEeccchheeccCCCccchhhhcccCCCccccCHHH
Confidence            67889999999999999999999999999999999999999999999998754321        1223467899999999


Q ss_pred             hhh-cCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhc
Q 026540           75 ILR-AGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIR  153 (237)
Q Consensus        75 ~~~-~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (237)
                      +.+ ..++.++|+||+|++++++++|..||....      .......   .....+..                      
T Consensus       198 ~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~------~~~~~~~---~~~~~~~~----------------------  246 (303)
T 2vwi_A          198 MEQVRGYDFKADIWSFGITAIELATGAAPYHKYP------PMKVLML---TLQNDPPS----------------------  246 (303)
T ss_dssp             HHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSC------GGGHHHH---HHTSSCCC----------------------
T ss_pred             hccccCCCchhhHHHHHHHHHHHHhCCCCCccCc------hhhHHHH---HhccCCCc----------------------
Confidence            986 468999999999999999999999997653      1111110   11000000                      


Q ss_pred             cccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccCC
Q 026540          154 RLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNST  211 (237)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~~  211 (237)
                            ..... .........+..+.+++.+||+.||.+|||+.++++||||......
T Consensus       247 ------~~~~~-~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~~~  297 (303)
T 2vwi_A          247 ------LETGV-QDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQKAKNK  297 (303)
T ss_dssp             ------TTC------CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHTSTTC------
T ss_pred             ------ccccc-ccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhhChhhhcCCCC
Confidence                  00000 0011122346788999999999999999999999999999976543

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=99.96  E-value=1.2e-30  Score=211.61  Aligned_cols=168  Identities=20%  Similarity=0.216  Sum_probs=127.0

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCc------CcccCcCCCcccchHHhh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK------QFAEEIQTRQYRAPEVIL   76 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~------~~~~~~~~~~~~~PE~~~   76 (237)
                      +++.++..++.|++.+|.|+|..+++||||||+||+++.++.+||+|||++.....      ......|++.|+|||.+.
T Consensus       113 ~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  192 (311)
T 3ork_A          113 MTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQAR  192 (311)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEETTSCEEECCCSCC------------------CCTTCCHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEcCCCCEEEeeccCcccccccccccccccccCcCcccCCHHHhc
Confidence            67889999999999999999999999999999999999999999999999865432      122346799999999999


Q ss_pred             hcCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcccc
Q 026540           77 RAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLK  156 (237)
Q Consensus        77 ~~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (237)
                      +..++.++|+||+|++++++++|..||.+..      ........... ...+..                         
T Consensus       193 ~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~------~~~~~~~~~~~-~~~~~~-------------------------  240 (311)
T 3ork_A          193 GDSVDARSDVYSLGCVLYEVLTGEPPFTGDS------PVSVAYQHVRE-DPIPPS-------------------------  240 (311)
T ss_dssp             TCCCCHHHHHHHHHHHHHHHHHSSCSCCCSS------HHHHHHHHHHC-CCCCHH-------------------------
T ss_pred             CCCCCchHhHHHHHHHHHHHHhCCCCCCCCC------hHHHHHHHhcC-CCCCcc-------------------------
Confidence            9899999999999999999999999997652      22221111110 000000                         


Q ss_pred             CCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccCCccc
Q 026540          157 FWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNSTRDE  214 (237)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~~~~~  214 (237)
                                  ......+..+.++|.+||+.||.+||++.+++.|+|+.......+.
T Consensus       241 ------------~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~~~~~~~  286 (311)
T 3ork_A          241 ------------ARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNGEPPE  286 (311)
T ss_dssp             ------------HHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHTTCCCS
T ss_pred             ------------cccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHHhcCCCCC
Confidence                        0012346788999999999999999999999999999876554443

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=99.96  E-value=1.2e-30  Score=214.40  Aligned_cols=184  Identities=20%  Similarity=0.204  Sum_probs=132.6

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhh-hcCCccCCCCCccccCCCCcEEEeecCcceecCc-CcccCcCCCcccchHHhhhc-
Q 026540            2 TIVEKKLKRRAKRAVANISIRRA-SMGGIELPKPERCLDGIDMRCKVVDFGNACRANK-QFAEEIQTRQYRAPEVILRA-   78 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~-~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~-~~~~~~~~~~~~~PE~~~~~-   78 (237)
                      .+++..+..++.|++.||.|+|. .+++|+||||+||+++.++.++|+|||++..... ......++..|+|||.+.+. 
T Consensus       147 ~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  226 (348)
T 2pml_X          147 FIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSDFGESEYMVDKKIKGSRGTYEFMPPEFFSNES  226 (348)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTSCEECCCCCGGGEEECTTSCEEECCCTTCEECBTTEECSSCSCGGGCCGGGGSSCC
T ss_pred             CCCHHHHHHHHHHHHHHHHHHhccCCEeecCCChHhEEEcCCCcEEEeccccccccccccccCCCCCcCccCchhhcCCC
Confidence            36788999999999999999999 9999999999999999999999999999876432 33455788999999999877 


Q ss_pred             CCCc-hhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccC
Q 026540           79 GYSF-SVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKF  157 (237)
Q Consensus        79 ~~~~-~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (237)
                      .++. ++|+||+|++++++++|..||....     ........+.......+..       ...+..             
T Consensus       227 ~~~~~~~Di~slG~il~~l~~g~~pf~~~~-----~~~~~~~~i~~~~~~~~~~-------~~~~~~-------------  281 (348)
T 2pml_X          227 SYNGAKVDIWSLGICLYVMFYNVVPFSLKI-----SLVELFNNIRTKNIEYPLD-------RNHFLY-------------  281 (348)
T ss_dssp             CEEHHHHHHHHHHHHHHHHHHSSCSSCCSS-----CSHHHHHHHTSCCCCCCCS-------SSSSTT-------------
T ss_pred             CCCcchhhHHHHHHHHHHHHhCCCCCCCCC-----cHHHHHHHHhccCcCCccc-------hhhhhc-------------
Confidence            5665 8999999999999999999997653     1122222221100000000       000000             


Q ss_pred             CchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccCCcc
Q 026540          158 WSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNSTRD  213 (237)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~~~~  213 (237)
                       +...  ..........+..+.+|+.+||+.||.+|||++|+++||||........
T Consensus       282 -~~~~--~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~hp~f~~~~~~~~  334 (348)
T 2pml_X          282 -PLTN--KKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHEWLADTNIEDL  334 (348)
T ss_dssp             -TTCC----------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGTTCCHHHH
T ss_pred             -cccc--cccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcCccccCCCHHHH
Confidence             0000  0001112345678999999999999999999999999999997765443

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=99.96  E-value=3.6e-30  Score=208.74  Aligned_cols=164  Identities=26%  Similarity=0.343  Sum_probs=130.8

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC---cccCcCCCcccchHHhhhcC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ---FAEEIQTRQYRAPEVILRAG   79 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~~~~PE~~~~~~   79 (237)
                      +++.++..++.|++.||.|+|..+++|+||||+||+++.++.++|+|||++......   .....+++.|+|||.+.+..
T Consensus       122 ~~~~~~~~i~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  201 (314)
T 3com_A          122 LTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIG  201 (314)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECBTTBSCBCCCCSCGGGCCHHHHSSSC
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCCcCCCcCHHHEEECCCCCEEEeecccchhhhhhccccCccCCCCCccChhhcCCCC
Confidence            678899999999999999999999999999999999999999999999998665432   33457789999999998888


Q ss_pred             CCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCc
Q 026540           80 YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWS  159 (237)
Q Consensus        80 ~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (237)
                      ++.++|+||+|++++++++|..||....      .......+..   ..+                              
T Consensus       202 ~~~~~Di~slG~il~~l~~g~~p~~~~~------~~~~~~~~~~---~~~------------------------------  242 (314)
T 3com_A          202 YNCVADIWSLGITAIEMAEGKPPYADIH------PMRAIFMIPT---NPP------------------------------  242 (314)
T ss_dssp             BCTTHHHHHHHHHHHHHHHSSCTTTTSC------HHHHHHHHHH---SCC------------------------------
T ss_pred             CCccccHHHHHHHHHHHHhCCCCCCCCC------hHHHHHHHhc---CCC------------------------------
Confidence            9999999999999999999999997542      2111111100   000                              


Q ss_pred             hhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccCC
Q 026540          160 LDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNST  211 (237)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~~  211 (237)
                            .....+...+..+.+||.+||..||.+|||+.++++||||......
T Consensus       243 ------~~~~~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~~~~~~~~~~~  288 (314)
T 3com_A          243 ------PTFRKPELWSDNFTDFVKQCLVKSPEQRATATQLLQHPFVRSAKGV  288 (314)
T ss_dssp             ------CCCSSGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTTSHHHHTCCCG
T ss_pred             ------cccCCcccCCHHHHHHHHHHccCChhhCcCHHHHHhCHHHhcCCcc
Confidence                  0001122346788999999999999999999999999999976543

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=99.96  E-value=3.5e-30  Score=209.72  Aligned_cols=165  Identities=22%  Similarity=0.269  Sum_probs=126.1

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCc---EEEeecCcceecCcC--cccCcCCCcccchHHhhh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMR---CKVVDFGNACRANKQ--FAEEIQTRQYRAPEVILR   77 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~---~kl~dfg~~~~~~~~--~~~~~~~~~~~~PE~~~~   77 (237)
                      +++.++..++.|++.||.|+|..+++|+||||+||+++.++.   +||+|||++......  .....+++.|+|||++..
T Consensus       111 ~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~gt~~y~aPE~~~~  190 (322)
T 2ycf_A          111 LKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVS  190 (322)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSSSCCEEECCCTTCEECCCCHHHHHHHSCCTTCCHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEecCCCCCeEEEccCccceecccccccccccCCcCccCchhhcc
Confidence            578899999999999999999999999999999999987654   999999998765432  223467899999999863


Q ss_pred             ---cCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcc
Q 026540           78 ---AGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRR  154 (237)
Q Consensus        78 ---~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (237)
                         ..++.++|+||+|++++++++|..||......     ......+.......                          
T Consensus       191 ~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-----~~~~~~~~~~~~~~--------------------------  239 (322)
T 2ycf_A          191 VGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQ-----VSLKDQITSGKYNF--------------------------  239 (322)
T ss_dssp             TTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCS-----SCHHHHHHHTCCCC--------------------------
T ss_pred             CCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchH-----HHHHHHHHhCcccc--------------------------
Confidence               45889999999999999999999999754311     00111110000000                          


Q ss_pred             ccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccC
Q 026540          155 LKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNS  210 (237)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~  210 (237)
                           ...       .....+..+.+||.+||..||.+|||++++++||||.....
T Consensus       240 -----~~~-------~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~h~~~~~~~~  283 (322)
T 2ycf_A          240 -----IPE-------VWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDEDM  283 (322)
T ss_dssp             -----CHH-------HHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGCCHHH
T ss_pred             -----Cch-------hhhhcCHHHHHHHHHHcccCHhhCCCHHHHhhCcCcCCHHH
Confidence                 000       01124678899999999999999999999999999987643

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=99.96  E-value=1.5e-30  Score=207.25  Aligned_cols=158  Identities=23%  Similarity=0.340  Sum_probs=120.4

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC--cccCcCCCcccchHHhhhcCC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ--FAEEIQTRQYRAPEVILRAGY   80 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~--~~~~~~~~~~~~PE~~~~~~~   80 (237)
                      +++.++..++.|++.||.|+|..+++|+||||+||+++.++.++|+|||++......  .....+++.|+|||.+.+..+
T Consensus       108 ~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  187 (276)
T 2h6d_A          108 VEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLY  187 (276)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHCSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC-------------CCTGGGTTSCC
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCCccCCCChhhEEECCCCCEEEeecccccccCCCcceecccCCccccCHHHHcCCCC
Confidence            578899999999999999999999999999999999999999999999998654322  234467889999999987765


Q ss_pred             -CchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCc
Q 026540           81 -SFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWS  159 (237)
Q Consensus        81 -~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (237)
                       +.++|+||+|++++++++|..||....      .......+.                                     
T Consensus       188 ~~~~~Di~slG~~l~~l~~g~~p~~~~~------~~~~~~~~~-------------------------------------  224 (276)
T 2h6d_A          188 AGPEVDIWSCGVILYALLCGTLPFDDEH------VPTLFKKIR-------------------------------------  224 (276)
T ss_dssp             CHHHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHH-------------------------------------
T ss_pred             CCccchHHHHHHHHHHHHhCCCCCCCCc------HHHHHHHhh-------------------------------------
Confidence             688999999999999999999996542      111111110                                     


Q ss_pred             hhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcc
Q 026540          160 LDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLR  208 (237)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~  208 (237)
                           ......+...+..+.+++.+||+.||.+|||++++++||||+..
T Consensus       225 -----~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~l~h~~~~~~  268 (276)
T 2h6d_A          225 -----GGVFYIPEYLNRSVATLLMHMLQVDPLKRATIKDIREHEWFKQD  268 (276)
T ss_dssp             -----HCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHSHHHHTT
T ss_pred             -----cCcccCchhcCHHHHHHHHHHccCChhhCCCHHHHHhChhhccC
Confidence                 00111233446778999999999999999999999999999754

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=99.96  E-value=5e-30  Score=208.76  Aligned_cols=166  Identities=16%  Similarity=0.189  Sum_probs=117.9

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC-----cccCcCCCcccchHHhh
Q 026540            2 TIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ-----FAEEIQTRQYRAPEVIL   76 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~-----~~~~~~~~~~~~PE~~~   76 (237)
                      .+++.++..++.|++.||.|+|..+++||||||+||+++.++.+||+|||++......     .....+++.|+|||.+.
T Consensus       133 ~~~~~~~~~i~~qi~~al~~LH~~~ivH~Dikp~NIli~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~  212 (323)
T 3qup_A          133 NLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLA  212 (323)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEECCCCC-----------------CCGGGCCHHHHH
T ss_pred             ccCHHHHHHHHHHHHHHHHHHHcCCcccCCCCcceEEEcCCCCEEEeeccccccccccccccccccccCcccccCchhhc
Confidence            3778999999999999999999999999999999999999999999999998654321     12234567899999999


Q ss_pred             hcCCCchhhhhhhhhHHHHHhc-CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccc
Q 026540           77 RAGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRL  155 (237)
Q Consensus        77 ~~~~~~~~diws~g~~l~~~~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (237)
                      +..++.++|+||+|++++++++ |..||.+..      .......+..                                
T Consensus       213 ~~~~~~~~Di~slG~il~ell~~g~~p~~~~~------~~~~~~~~~~--------------------------------  254 (323)
T 3qup_A          213 DNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIE------NAEIYNYLIG--------------------------------  254 (323)
T ss_dssp             HCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC------GGGHHHHHHT--------------------------------
T ss_pred             CCCCCCccchhhHHHHHHHHHhCCCCCccccC------hHHHHHHHhc--------------------------------
Confidence            9999999999999999999999 889987653      1111111100                                


Q ss_pred             cCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCC-------HHHHhcCCCcCcccCCccc
Q 026540          156 KFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPT-------AQQCLQHPWLSLRNSTRDE  214 (237)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t-------~~ell~hp~f~~~~~~~~~  214 (237)
                               ......+...+..+.+|+.+||+.||.+|||       ++++++|+|+......+..
T Consensus       255 ---------~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~~~~~~~~~pl~  311 (323)
T 3qup_A          255 ---------GNRLKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHLSVLSTSQDPLY  311 (323)
T ss_dssp             ---------TCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC------------
T ss_pred             ---------CCCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhhhcCCCCCCCC
Confidence                     0011223445678999999999999999999       7788889999987655543

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=99.96  E-value=2.1e-30  Score=210.37  Aligned_cols=164  Identities=23%  Similarity=0.266  Sum_probs=120.9

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhh-cCCccCCCCCccccCCCCcEEEeecCcceecCc--CcccCcCCCcccchHHhh---
Q 026540            3 IVEKKLKRRAKRAVANISIRRAS-MGGIELPKPERCLDGIDMRCKVVDFGNACRANK--QFAEEIQTRQYRAPEVIL---   76 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~-~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~--~~~~~~~~~~~~~PE~~~---   76 (237)
                      +++..+..++.|++.||.|+|.. +++|+||||+||+++.++.++|+|||++.....  ......+++.|+|||.+.   
T Consensus       121 ~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  200 (318)
T 2dyl_A          121 IPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSAGCAAYMAPERIDPPD  200 (318)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCGGGEEECTTSCEEECCCTTC--------------CCTTCCHHHHC---
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhhCCEEeCCCCHHHEEECCCCCEEEEECCCchhccCCccccccCCCccccChhhccccc
Confidence            57889999999999999999996 999999999999999999999999999865432  233456789999999995   


Q ss_pred             --hcCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcc
Q 026540           77 --RAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRR  154 (237)
Q Consensus        77 --~~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (237)
                        ...++.++|+||+|++++++++|..||....     .....+..+...  ..+                         
T Consensus       201 ~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~-----~~~~~~~~~~~~--~~~-------------------------  248 (318)
T 2dyl_A          201 PTKPDYDIRADVWSLGISLVELATGQFPYKNCK-----TDFEVLTKVLQE--EPP-------------------------  248 (318)
T ss_dssp             -----CCTHHHHHHHHHHHHHHHHSSCTTTTCC-----SHHHHHHHHHHS--CCC-------------------------
T ss_pred             ccccCCccccchhhHHHHHHHHHhCCCCCCCCC-----ccHHHHHHHhcc--CCC-------------------------
Confidence              4457889999999999999999999997542     222222221110  000                         


Q ss_pred             ccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccC
Q 026540          155 LKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNS  210 (237)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~  210 (237)
                                  ........+..+.+|+.+||+.||.+|||++++++||||.....
T Consensus       249 ------------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~~  292 (318)
T 2dyl_A          249 ------------LLPGHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEHSFIKRYET  292 (318)
T ss_dssp             ------------CCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTSHHHHHHHH
T ss_pred             ------------CCCccCCCCHHHHHHHHHHccCChhHCcCHHHHhhCHHHHhccc
Confidence                        00011134678899999999999999999999999999987654

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=99.96  E-value=3.8e-30  Score=217.53  Aligned_cols=161  Identities=17%  Similarity=0.283  Sum_probs=117.9

Q ss_pred             HHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCC-----CCcEEEeecCcceecCc------CcccCcCCCcccchH
Q 026540            5 EKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGI-----DMRCKVVDFGNACRANK------QFAEEIQTRQYRAPE   73 (237)
Q Consensus         5 ~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~-----~~~~kl~dfg~~~~~~~------~~~~~~~~~~~~~PE   73 (237)
                      +.++..++.|++.||.|+|+.+++||||||+|||++.     ...++|+|||++.....      ......||+.|+|||
T Consensus       117 ~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~gt~~y~APE  196 (432)
T 3p23_A          117 GLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPE  196 (432)
T ss_dssp             SSCHHHHHHHHHHHHHHHHHTTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC------------CCSCTTSCCGG
T ss_pred             chhHHHHHHHHHHHHHHHHHCcCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCCCcceeeccccCCCcCccChh
Confidence            3456789999999999999999999999999999953     23688999999865432      223457899999999


Q ss_pred             Hhhh---cCCCchhhhhhhhhHHHHHhc-CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCcc
Q 026540           74 VILR---AGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDL  149 (237)
Q Consensus        74 ~~~~---~~~~~~~diws~g~~l~~~~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (237)
                      ++.+   ..++.++|+||+||+++++++ |..||....       ......   ..+....                   
T Consensus       197 ~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~-------~~~~~~---~~~~~~~-------------------  247 (432)
T 3p23_A          197 MLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSL-------QRQANI---LLGACSL-------------------  247 (432)
T ss_dssp             GTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTT-------THHHHH---HTTCCCC-------------------
T ss_pred             hhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhh-------HHHHHH---HhccCCc-------------------
Confidence            9974   457789999999999999999 888885432       111110   0100000                   


Q ss_pred             chhccccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccC
Q 026540          150 KRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNS  210 (237)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~  210 (237)
                                      .........+..+.+||.+||+.||.+|||++|+++||||....+
T Consensus       248 ----------------~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~hp~f~~~~~  292 (432)
T 3p23_A          248 ----------------DCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKHPFFWSLEK  292 (432)
T ss_dssp             ----------------TTSCTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHTSTTTCCHHH
T ss_pred             ----------------cccCccccccHHHHHHHHHHHhCCHhhCCCHHHHHhCccccChHH
Confidence                            000012234567889999999999999999999999999986543

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=99.96  E-value=5.1e-30  Score=206.94  Aligned_cols=161  Identities=22%  Similarity=0.284  Sum_probs=130.1

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC---cccCcCCCcccchHHhhhcC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ---FAEEIQTRQYRAPEVILRAG   79 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~~~~PE~~~~~~   79 (237)
                      +++.++..++.|++.||.|+|..+++|+||||+||+++.++.++|+|||++......   .....+++.|+|||.+.+..
T Consensus       116 ~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  195 (303)
T 3a7i_A          116 LDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSA  195 (303)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECBTTBCCBCCCCSCGGGCCHHHHTTCC
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCCccCCCChheEEECCCCCEEEeecccceecCccccccCccCCCcCccCHHHHhcCC
Confidence            578899999999999999999999999999999999999999999999998665432   33457789999999999888


Q ss_pred             CCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCc
Q 026540           80 YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWS  159 (237)
Q Consensus        80 ~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (237)
                      ++.++|+||+|++++++++|..||....      .......+..  +.                                
T Consensus       196 ~~~~~Di~slG~il~~l~~g~~p~~~~~------~~~~~~~~~~--~~--------------------------------  235 (303)
T 3a7i_A          196 YDSKADIWSLGITAIELARGEPPHSELH------PMKVLFLIPK--NN--------------------------------  235 (303)
T ss_dssp             BCTHHHHHHHHHHHHHHHHSSCTTTTSC------HHHHHHHHHH--SC--------------------------------
T ss_pred             CCchhhhHHHHHHHHHHccCCCCCCCcC------HHHHHHHhhc--CC--------------------------------
Confidence            9999999999999999999999986542      2111111100  00                                


Q ss_pred             hhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccC
Q 026540          160 LDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNS  210 (237)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~  210 (237)
                             ....+...+..+.+|+.+||+.||.+|||++++++||||.....
T Consensus       236 -------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~~~~~~~  279 (303)
T 3a7i_A          236 -------PPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFILRNAK  279 (303)
T ss_dssp             -------CCCCCSSCCHHHHHHHHHHCCSSGGGSCCHHHHTTCHHHHHHCC
T ss_pred             -------CCCCccccCHHHHHHHHHHcCCChhhCcCHHHHhhChhhhcCCC
Confidence                   01122344677899999999999999999999999999986543

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=99.96  E-value=5.2e-30  Score=208.84  Aligned_cols=162  Identities=24%  Similarity=0.317  Sum_probs=122.5

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCc---CcccCcCCCcccchHHhh---
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK---QFAEEIQTRQYRAPEVIL---   76 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~---~~~~~~~~~~~~~PE~~~---   76 (237)
                      +++..+..++.|++.||.|+|..+++|+||||+||+++.++.++|+|||++.....   ......+++.|+|||.+.   
T Consensus       126 ~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  205 (326)
T 2x7f_A          126 LKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDE  205 (326)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTCCEEECCCTTTC-------------CCGGGCCHHHHC---
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCccccCCcHHHEEEcCCCCEEEeeCcCceecCcCccccccccCCccccChhhhcccc
Confidence            67888999999999999999999999999999999999999999999999865432   223456789999999997   


Q ss_pred             --hcCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcc
Q 026540           77 --RAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRR  154 (237)
Q Consensus        77 --~~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (237)
                        ...++.++|+||+|++++++++|..||....      .......+.+  +..+                         
T Consensus       206 ~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~------~~~~~~~~~~--~~~~-------------------------  252 (326)
T 2x7f_A          206 NPDATYDFKSDLWSLGITAIEMAEGAPPLCDMH------PMRALFLIPR--NPAP-------------------------  252 (326)
T ss_dssp             -----CCTTHHHHHHHHHHHHHHHSSCTTTTSC------HHHHHHHHHH--SCCC-------------------------
T ss_pred             ccCcCCCccchHHHHHHHHHHHHhCCCCCCCCc------HHHHHHHhhc--Cccc-------------------------
Confidence              4568899999999999999999999996542      2222211110  0000                         


Q ss_pred             ccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccC
Q 026540          155 LKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNS  210 (237)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~  210 (237)
                                   .......+..+.+||.+||..||.+|||++++++||||.....
T Consensus       253 -------------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~hp~~~~~~~  295 (326)
T 2x7f_A          253 -------------RLKSKKWSKKFQSFIESCLVKNHSQRPATEQLMKHPFIRDQPN  295 (326)
T ss_dssp             -------------CCSCSCSCHHHHHHHHHHCCSSGGGSCCHHHHHTSHHHHCCTT
T ss_pred             -------------cCCccccCHHHHHHHHHHhccChhhCCCHHHHhhChHHhhCcc
Confidence                         0012234578899999999999999999999999999986644

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=99.96  E-value=5.6e-30  Score=216.75  Aligned_cols=160  Identities=21%  Similarity=0.313  Sum_probs=118.4

Q ss_pred             HHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCC-------------CcEEEeecCcceecCcC-------cccCcC
Q 026540            6 KKLKRRAKRAVANISIRRASMGGIELPKPERCLDGID-------------MRCKVVDFGNACRANKQ-------FAEEIQ   65 (237)
Q Consensus         6 ~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~-------------~~~kl~dfg~~~~~~~~-------~~~~~~   65 (237)
                      ..+..++.|++.||.|+|+.+++||||||+|||++.+             +.+||+|||++......       .....|
T Consensus       115 ~~~~~i~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~g  194 (434)
T 2rio_A          115 YNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSG  194 (434)
T ss_dssp             CCHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECCCTTCEECCC--------------
T ss_pred             hhHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCcccccccccCCCceEEEEcccccceecCCCCccceeeecCCCC
Confidence            3457899999999999999999999999999999654             48999999999765432       223478


Q ss_pred             CCcccchHHhhh-------cCCCchhhhhhhhhHHHHHhc-CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCC
Q 026540           66 TRQYRAPEVILR-------AGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGA  137 (237)
Q Consensus        66 ~~~~~~PE~~~~-------~~~~~~~diws~g~~l~~~~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  137 (237)
                      ++.|+|||++.+       ..++.++|+||+||+++++++ |..||....     ...   ..+...  ...        
T Consensus       195 t~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~-----~~~---~~i~~~--~~~--------  256 (434)
T 2rio_A          195 TSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKY-----SRE---SNIIRG--IFS--------  256 (434)
T ss_dssp             CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTT-----THH---HHHHHT--CCC--------
T ss_pred             CCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCch-----hhH---HHHhcC--CCC--------
Confidence            999999999976       458899999999999999998 889986542     111   111110  000        


Q ss_pred             CchhhhcccCccchhccccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcc
Q 026540          138 QSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLR  208 (237)
Q Consensus       138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~  208 (237)
                                 ...        .      ........+.++.+||.+||+.||.+|||+.++++||||...
T Consensus       257 -----------~~~--------~------~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~hp~f~~~  302 (434)
T 2rio_A          257 -----------LDE--------M------KCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLFWPK  302 (434)
T ss_dssp             -----------CCC--------C------TTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSCH
T ss_pred             -----------ccc--------c------cccccccchHHHHHHHHHHhhCChhhCCCHHHHHhCCccCCc
Confidence                       000        0      001134567889999999999999999999999999999754

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=99.96  E-value=7.6e-30  Score=203.45  Aligned_cols=161  Identities=21%  Similarity=0.247  Sum_probs=127.7

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhc-----CCccCCCCCccccCCCCcEEEeecCcceecCcC---cccCcCCCcccchHH
Q 026540            3 IVEKKLKRRAKRAVANISIRRASM-----GGIELPKPERCLDGIDMRCKVVDFGNACRANKQ---FAEEIQTRQYRAPEV   74 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~-----~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~~~~PE~   74 (237)
                      +++.++..++.|++.||.|+|..+     ++|+||||+||+++.++.++|+|||++......   .....++..|+|||.
T Consensus       108 ~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~  187 (279)
T 2w5a_A          108 LDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQ  187 (279)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEECCCCHHHHC---CHHHHHHHSCCTTCCHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEecCchheeeccccccccccCCCccccChHH
Confidence            678899999999999999999999     999999999999999999999999998654322   123467899999999


Q ss_pred             hhhcCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcc
Q 026540           75 ILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRR  154 (237)
Q Consensus        75 ~~~~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (237)
                      +.+..++.++|+||+|++++++++|..||....      .......+...  .                           
T Consensus       188 ~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~------~~~~~~~i~~~--~---------------------------  232 (279)
T 2w5a_A          188 MNRMSYNEKSDIWSLGCLLYELCALMPPFTAFS------QKELAGKIREG--K---------------------------  232 (279)
T ss_dssp             HHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHT--C---------------------------
T ss_pred             hccCCCCchhhHHHHHHHHHHHHHCCCCCcccC------HHHHHHHHhhc--c---------------------------
Confidence            998889999999999999999999999997542      21111111110  0                           


Q ss_pred             ccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccC
Q 026540          155 LKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNS  210 (237)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~  210 (237)
                                  ....+...+..+.+++.+||+.||.+|||++|+++|+|+.+...
T Consensus       233 ------------~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~~~~~~  276 (279)
T 2w5a_A          233 ------------FRRIPYRYSDELNEIITRMLNLKDYHRPSVEEILENPLILEHHH  276 (279)
T ss_dssp             ------------CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTCCGGGS
T ss_pred             ------------cccCCcccCHHHHHHHHHHcCCCcccCCCHHHHHhChhhhhhcc
Confidence                        00123345678999999999999999999999999999997653

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=99.96  E-value=9e-30  Score=204.96  Aligned_cols=161  Identities=21%  Similarity=0.284  Sum_probs=118.2

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCc-----------------CcccCcC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK-----------------QFAEEIQ   65 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~-----------------~~~~~~~   65 (237)
                      +++.++..++.|++.||.|+|..+++|+||||+||+++.++.++|+|||++.....                 ......+
T Consensus       113 ~~~~~~~~i~~qi~~~l~~LH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (303)
T 1zy4_A          113 QQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIG  192 (303)
T ss_dssp             GCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCCCCCSCTTC------------------------
T ss_pred             cchHHHHHHHHHHHHHHHHHHhCCeecccCCHHhEEEcCCCCEEEeeCcchhhcccccchhccccccccccccccccCCC
Confidence            56788999999999999999999999999999999999999999999998865431                 1234467


Q ss_pred             CCcccchHHhhhc-CCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhc
Q 026540           66 TRQYRAPEVILRA-GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFD  144 (237)
Q Consensus        66 ~~~~~~PE~~~~~-~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  144 (237)
                      ++.|+|||.+.+. .++.++|+||+|++++++++   ||...        .........+....        ..      
T Consensus       193 ~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~--------~~~~~~~~~~~~~~--------~~------  247 (303)
T 1zy4_A          193 TAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTG--------MERVNILKKLRSVS--------IE------  247 (303)
T ss_dssp             -CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSH--------HHHHHHHHHHHSTT--------CC------
T ss_pred             cccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCc--------hhHHHHHHhccccc--------cc------
Confidence            8899999999865 68999999999999999998   44321        11111111111000        00      


Q ss_pred             ccCccchhccccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCccc
Q 026540          145 RHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRN  209 (237)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~  209 (237)
                                           .....+...+..+.+++.+||+.||.+|||++++++||||....
T Consensus       248 ---------------------~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~  291 (303)
T 1zy4_A          248 ---------------------FPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWLPVKH  291 (303)
T ss_dssp             ---------------------CCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHSSCSCCCC
T ss_pred             ---------------------cCccccccchHHHHHHHHHHHhcCcccCcCHHHHhCCCCcCCCC
Confidence                                 00012334456788999999999999999999999999998654

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=99.96  E-value=2e-29  Score=202.45  Aligned_cols=159  Identities=16%  Similarity=0.073  Sum_probs=122.9

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCcccc---CCCCcEEEeecCcceecCcC----------cccCcCCCcc
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLD---GIDMRCKVVDFGNACRANKQ----------FAEEIQTRQY   69 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili---~~~~~~kl~dfg~~~~~~~~----------~~~~~~~~~~   69 (237)
                      +++.++..++.|++.||.|+|+.+++||||||+||++   +.++.+||+|||++......          .....+++.|
T Consensus       102 ~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y  181 (296)
T 4hgt_A          102 FSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARY  181 (296)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCBCCCCCSCCCCSCGGG
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeeeeccCCCCeEEEecCccceeccCcccCccCCCCcccccCCCccc
Confidence            6788999999999999999999999999999999999   67889999999999754432          1245778999


Q ss_pred             cchHHhhhcCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCcc
Q 026540           70 RAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDL  149 (237)
Q Consensus        70 ~~PE~~~~~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (237)
                      +|||.+.+..++.++|+||+|++++++++|..||..........   ....+.......+                    
T Consensus       182 ~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~---~~~~~~~~~~~~~--------------------  238 (296)
T 4hgt_A          182 ASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQ---KYERISEKKMSTP--------------------  238 (296)
T ss_dssp             CCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSS---HHHHHHHHHHHSC--------------------
T ss_pred             cchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhh---hhhhhhcccccch--------------------
Confidence            99999999899999999999999999999999998654221111   1111100000000                    


Q ss_pred             chhccccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhc
Q 026540          150 KRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ  201 (237)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  201 (237)
                                       ........+..+.+++.+||+.||++|||++++++
T Consensus       239 -----------------~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~  273 (296)
T 4hgt_A          239 -----------------IEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQ  273 (296)
T ss_dssp             -----------------HHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHH
T ss_pred             -----------------hhhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHH
Confidence                             00011234678999999999999999999999987

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=99.96  E-value=1.7e-30  Score=211.99  Aligned_cols=169  Identities=24%  Similarity=0.317  Sum_probs=112.0

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhh-cCCccCCCCCccccCCCCcEEEeecCcceecCcC--cccCcCCCcccchHHh----
Q 026540            3 IVEKKLKRRAKRAVANISIRRAS-MGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ--FAEEIQTRQYRAPEVI----   75 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~-~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~--~~~~~~~~~~~~PE~~----   75 (237)
                      +++..+..++.|++.||.|+|.. +++|+||||+||+++.++.+||+|||++......  .....+++.|+|||.+    
T Consensus       122 ~~~~~~~~i~~~i~~~l~~lH~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~  201 (327)
T 3aln_A          122 IPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPSA  201 (327)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHSCCCSCCCGGGEEEETTTEEEECCCSSSCC--------------------------
T ss_pred             CcHHHHHHHHHHHHHHHHHHhccCCEeECCCCHHHEEEcCCCCEEEccCCCceecccccccccCCCCccccCceeecccc
Confidence            56788999999999999999999 9999999999999999999999999998654322  2234678999999998    


Q ss_pred             hhcCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccc
Q 026540           76 LRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRL  155 (237)
Q Consensus        76 ~~~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (237)
                      .+..++.++|+||+|++++++++|..||......        ...+    ..              ...  +.....   
T Consensus       202 ~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--------~~~~----~~--------------~~~--~~~~~~---  250 (327)
T 3aln_A          202 SRQGYDVRSDVWSLGITLYELATGRFPYPKWNSV--------FDQL----TQ--------------VVK--GDPPQL---  250 (327)
T ss_dssp             ----CCSHHHHHHHHHHHHHHHHSCCCSSCC-------------------CC--------------CCC--SCCCCC---
T ss_pred             CcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchH--------HHHH----HH--------------Hhc--CCCCCC---
Confidence            3456889999999999999999999999754200        0000    00              000  000000   


Q ss_pred             cCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccCCcc
Q 026540          156 KFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNSTRD  213 (237)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~~~~  213 (237)
                                 ........+..+.+|+.+||+.||.+|||+.++++||||........
T Consensus       251 -----------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp~~~~~~~~~~  297 (327)
T 3aln_A          251 -----------SNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKHPFILMYEERAV  297 (327)
T ss_dssp             -----------CCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHHHHSCC
T ss_pred             -----------CCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHhChHHHHhHhhHH
Confidence                       00011234678999999999999999999999999999997765444

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=99.96  E-value=1.2e-29  Score=205.74  Aligned_cols=161  Identities=20%  Similarity=0.267  Sum_probs=120.9

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC-----cccCcCCCcccchHHhhh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ-----FAEEIQTRQYRAPEVILR   77 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~-----~~~~~~~~~~~~PE~~~~   77 (237)
                      +++.++..++.|++.||.|+|..+++|+||||+||+++. +.+||+|||++......     .....+++.|+|||.+.+
T Consensus       124 ~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  202 (313)
T 3cek_A          124 IDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVD-GMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKD  202 (313)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEET-TEEEECCCSSSCC--------------CCGGGCCHHHHTT
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEEEC-CeEEEeeccccccccCccccccccCCCCCCCcCCHHHHhh
Confidence            567889999999999999999999999999999999964 78999999998654322     123467899999999975


Q ss_pred             -----------cCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhccc
Q 026540           78 -----------AGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRH  146 (237)
Q Consensus        78 -----------~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  146 (237)
                                 ..++.++|+||+|++++++++|..||....     ....   .+.......                  
T Consensus       203 ~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~-----~~~~---~~~~~~~~~------------------  256 (313)
T 3cek_A          203 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII-----NQIS---KLHAIIDPN------------------  256 (313)
T ss_dssp             CC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCC-----SHHH---HHHHHHCTT------------------
T ss_pred             cccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHH-----HHHH---HHHHHHhcc------------------
Confidence                       367889999999999999999999996542     1111   111111000                  


Q ss_pred             CccchhccccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCccc
Q 026540          147 GDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRN  209 (237)
Q Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~  209 (237)
                                         .....+...+..+.+++.+||..||.+|||++|+++||||....
T Consensus       257 -------------------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~~~~~~~  300 (313)
T 3cek_A          257 -------------------HEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQT  300 (313)
T ss_dssp             -------------------SCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHCC-
T ss_pred             -------------------cccCCcccchHHHHHHHHHHccCCcccCcCHHHHhcCccccCCC
Confidence                               00112223356789999999999999999999999999998654

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=99.96  E-value=5e-29  Score=200.44  Aligned_cols=160  Identities=15%  Similarity=0.084  Sum_probs=124.0

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCc-----EEEeecCcceecCcC----------cccCcCCC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMR-----CKVVDFGNACRANKQ----------FAEEIQTR   67 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~-----~kl~dfg~~~~~~~~----------~~~~~~~~   67 (237)
                      +++.++..++.|++.||+|+|..+++||||||+||+++.++.     ++|+|||++......          .....|++
T Consensus       103 ~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~  182 (298)
T 1csn_A          103 FSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTA  182 (298)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCT
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEeccCCCCCCCeEEEEECccccccccccccccccccCccCCCCCc
Confidence            678999999999999999999999999999999999987765     999999998754422          23446889


Q ss_pred             cccchHHhhhcCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccC
Q 026540           68 QYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHG  147 (237)
Q Consensus        68 ~~~~PE~~~~~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  147 (237)
                      .|+|||.+.+..++.++|+||+|++++++++|..||......   ........+.......+.                 
T Consensus       183 ~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~---~~~~~~~~~~~~~~~~~~-----------------  242 (298)
T 1csn_A          183 RYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAA---TNKQKYERIGEKKQSTPL-----------------  242 (298)
T ss_dssp             TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSC---CHHHHHHHHHHHHHHSCH-----------------
T ss_pred             ccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhcc---ccHHHHHHHHhhccCccH-----------------
Confidence            999999999888999999999999999999999999875311   122222222111100000                 


Q ss_pred             ccchhccccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcC
Q 026540          148 DLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQH  202 (237)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h  202 (237)
                                   .       .....++..+.+++.+||..||.+|||++++++.
T Consensus       243 -------------~-------~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~  277 (298)
T 1csn_A          243 -------------R-------ELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGL  277 (298)
T ss_dssp             -------------H-------HHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHH
T ss_pred             -------------H-------HHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHH
Confidence                         0       0112346789999999999999999999998863

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=99.96  E-value=2.7e-29  Score=203.54  Aligned_cols=159  Identities=18%  Similarity=0.144  Sum_probs=119.8

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhc--CCccCCCCCccccCCCCcEEEeecCcceecCcC---cccCcCCCcccchHHhhh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASM--GGIELPKPERCLDGIDMRCKVVDFGNACRANKQ---FAEEIQTRQYRAPEVILR   77 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~--~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~~~~PE~~~~   77 (237)
                      +++.++..++.|++.||.|+|..+  ++||||||+||+++.++.+||+|||++......   .....|++.|+|||++.+
T Consensus       134 ~~~~~~~~i~~qi~~aL~~LH~~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~  213 (309)
T 3p86_A          134 LDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRD  213 (309)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHTSSSCCCCTTCCGGGEEECTTCCEEECCCC-----------------CCTTSCHHHHTT
T ss_pred             CCHHHHHHHHHHHHHHHHHHHcCCCCEECCCCChhhEEEeCCCcEEECCCCCCccccccccccccCCCCccccChhhhcC
Confidence            678899999999999999999999  999999999999999999999999998644322   234578999999999998


Q ss_pred             cCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccC
Q 026540           78 AGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKF  157 (237)
Q Consensus        78 ~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (237)
                      ..++.++|+||+|++++++++|..||....      .......+..                                  
T Consensus       214 ~~~~~~~DiwslG~il~elltg~~Pf~~~~------~~~~~~~~~~----------------------------------  253 (309)
T 3p86_A          214 EPSNEKSDVYSFGVILWELATLQQPWGNLN------PAQVVAAVGF----------------------------------  253 (309)
T ss_dssp             CCCCTTHHHHHHHHHHHHHHHCCCTTTTSC------HHHHHHHHHH----------------------------------
T ss_pred             CCCCchhhHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHh----------------------------------
Confidence            889999999999999999999999997552      2111111100                                  


Q ss_pred             CchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhc--CCCcCc
Q 026540          158 WSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ--HPWLSL  207 (237)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~--hp~f~~  207 (237)
                            .......+..++..+.+||.+||+.||.+|||++++++  .+++..
T Consensus       254 ------~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~  299 (309)
T 3p86_A          254 ------KCKRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKS  299 (309)
T ss_dssp             ------SCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC-
T ss_pred             ------cCCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence                  00011234456788999999999999999999999987  455543

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=99.96  E-value=2.8e-29  Score=208.36  Aligned_cols=153  Identities=19%  Similarity=0.219  Sum_probs=122.3

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC-----cccCcCCCcccchHHhhh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ-----FAEEIQTRQYRAPEVILR   77 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~-----~~~~~~~~~~~~PE~~~~   77 (237)
                      +++.++..++.|++.||.|+|..+++||||||+|||++.++.+||+|||++......     .....+++.|+|||++.+
T Consensus       200 ~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~  279 (370)
T 2psq_A          200 MTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFD  279 (370)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHT
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCeeccccchhhEEECCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcC
Confidence            577889999999999999999999999999999999999999999999999754421     223455778999999999


Q ss_pred             cCCCchhhhhhhhhHHHHHhc-CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcccc
Q 026540           78 AGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLK  156 (237)
Q Consensus        78 ~~~~~~~diws~g~~l~~~~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (237)
                      ..++.++|+||+|+++|++++ |..||.+..      .......+...                                
T Consensus       280 ~~~~~~~DvwslG~il~ellt~g~~p~~~~~------~~~~~~~~~~~--------------------------------  321 (370)
T 2psq_A          280 RVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP------VEELFKLLKEG--------------------------------  321 (370)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC------GGGHHHHHHTT--------------------------------
T ss_pred             CCCCcHHHHHHHHHHHHHHHcCCCCCCCCCC------HHHHHHHHhcC--------------------------------
Confidence            899999999999999999998 889987542      11111110000                                


Q ss_pred             CCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcC
Q 026540          157 FWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQH  202 (237)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h  202 (237)
                               .....+..++..+.+++.+||+.||.+|||++|++++
T Consensus       322 ---------~~~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~  358 (370)
T 2psq_A          322 ---------HRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVED  358 (370)
T ss_dssp             ---------CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ---------CCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence                     0112234557789999999999999999999999864

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=99.96  E-value=2.9e-29  Score=207.06  Aligned_cols=154  Identities=18%  Similarity=0.227  Sum_probs=123.2

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCc-----CcccCcCCCcccchHHhhh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK-----QFAEEIQTRQYRAPEVILR   77 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~-----~~~~~~~~~~~~~PE~~~~   77 (237)
                      +++.++..++.|++.||.|+|..+++||||||+||+++.++.++|+|||++.....     ......+++.|+|||++.+
T Consensus       190 l~~~~~~~~~~ql~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~  269 (359)
T 3vhe_A          190 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFD  269 (359)
T ss_dssp             BCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCEEC--CEECGGGCCHHHHHH
T ss_pred             cCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCcEEEEeccceeeecccccchhccccCCCceeEChhhhcC
Confidence            88999999999999999999999999999999999999999999999999865432     1223456788999999999


Q ss_pred             cCCCchhhhhhhhhHHHHHhc-CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcccc
Q 026540           78 AGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLK  156 (237)
Q Consensus        78 ~~~~~~~diws~g~~l~~~~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (237)
                      ..++.++|+||+|++++++++ |..||.+..     ........+ ...                               
T Consensus       270 ~~~~~~~Di~slG~il~ellt~g~~p~~~~~-----~~~~~~~~~-~~~-------------------------------  312 (359)
T 3vhe_A          270 RVYTIQSDVWSFGVLLWEIFSLGASPYPGVK-----IDEEFCRRL-KEG-------------------------------  312 (359)
T ss_dssp             CCCCHHHHHHHHHHHHHHHTTTSCCSSTTCC-----CSHHHHHHH-HHT-------------------------------
T ss_pred             CCCCchhhhhhHHHHHHHHHhcCCCCCCccc-----hhHHHHHHH-HcC-------------------------------
Confidence            999999999999999999998 999997653     111111111 100                               


Q ss_pred             CCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcC
Q 026540          157 FWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQH  202 (237)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h  202 (237)
                               .....+...++++.+++.+||+.||.+|||++|+++|
T Consensus       313 ---------~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~  349 (359)
T 3vhe_A          313 ---------TRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH  349 (359)
T ss_dssp             ---------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ---------CCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHH
Confidence                     0112233456789999999999999999999999975

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=99.96  E-value=6.3e-29  Score=199.68  Aligned_cols=159  Identities=16%  Similarity=0.103  Sum_probs=122.8

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccC---CCCcEEEeecCcceecCcC----------cccCcCCCcc
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDG---IDMRCKVVDFGNACRANKQ----------FAEEIQTRQY   69 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~---~~~~~kl~dfg~~~~~~~~----------~~~~~~~~~~   69 (237)
                      +++.++..++.|++.||+|+|..+++||||||+||+++   .++.+||+|||++......          .....+++.|
T Consensus       102 ~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y  181 (296)
T 3uzp_A          102 FSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARY  181 (296)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCBCCCCCSCCCCSCTTT
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHeEEecCCCCCeEEEeeCCCccccccccccccccccccccccccccc
Confidence            67889999999999999999999999999999999995   7789999999998754432          2345788999


Q ss_pred             cchHHhhhcCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCcc
Q 026540           70 RAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDL  149 (237)
Q Consensus        70 ~~PE~~~~~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (237)
                      +|||.+.+..++.++|+||+|++++++++|..||........   ......+.......+                    
T Consensus       182 ~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~---~~~~~~~~~~~~~~~--------------------  238 (296)
T 3uzp_A          182 ASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATK---RQKYERISEKKMSTP--------------------  238 (296)
T ss_dssp             CCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSS---SSHHHHHHHHHHHSC--------------------
T ss_pred             CChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhh---hhhhhhhcccccCCc--------------------
Confidence            999999988899999999999999999999999986532111   111111111000000                    


Q ss_pred             chhccccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhc
Q 026540          150 KRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ  201 (237)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  201 (237)
                                .       .......+..+.+++.+||+.||.+|||++++++
T Consensus       239 ----------~-------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~  273 (296)
T 3uzp_A          239 ----------I-------EVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQ  273 (296)
T ss_dssp             ----------H-------HHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHH
T ss_pred             ----------h-------HHHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHH
Confidence                      0       0011334678999999999999999999999886

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=99.96  E-value=5.3e-29  Score=206.15  Aligned_cols=162  Identities=12%  Similarity=0.026  Sum_probs=123.0

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccC--CCCcEEEeecCcceecCcC----------cccCcCCCccc
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDG--IDMRCKVVDFGNACRANKQ----------FAEEIQTRQYR   70 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~--~~~~~kl~dfg~~~~~~~~----------~~~~~~~~~~~   70 (237)
                      +++.++..++.|++.||.|+|..+++||||||+|||++  .++.+||+|||++......          .....||+.|+
T Consensus       149 l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~Nill~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~  228 (364)
T 3op5_A          149 FSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNYKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFT  228 (364)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEESSCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTC
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCeEEecCCHHHEEEecCCCCeEEEEECCcceecccCCcccccccCcccccCCCCCcc
Confidence            67899999999999999999999999999999999998  7899999999999654321          12335899999


Q ss_pred             chHHhhhcCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccc
Q 026540           71 APEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLK  150 (237)
Q Consensus        71 ~PE~~~~~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (237)
                      |||++.+..++.++|+||+|++++++++|..||.+..     ................                      
T Consensus       229 aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~-----~~~~~~~~~~~~~~~~----------------------  281 (364)
T 3op5_A          229 SIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNL-----KDPKYVRDSKIRYREN----------------------  281 (364)
T ss_dssp             CHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGT-----TCHHHHHHHHHHHHHC----------------------
T ss_pred             CHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccc-----cCHHHHHHHHHHhhhh----------------------
Confidence            9999998889999999999999999999999997542     1111111111100000                      


Q ss_pred             hhccccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhc
Q 026540          151 RIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ  201 (237)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  201 (237)
                               ...... .......++..+.+++..||..||.+||+++++++
T Consensus       282 ---------~~~~~~-~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~  322 (364)
T 3op5_A          282 ---------IASLMD-KCFPAANAPGEIAKYMETVKLLDYTEKPLYENLRD  322 (364)
T ss_dssp             ---------HHHHHH-HHSCTTCCCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred             ---------HHHHHH-HhcccccCHHHHHHHHHHHhcCCCCCCCCHHHHHH
Confidence                     001110 01112344678999999999999999999999886

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=99.96  E-value=1.3e-28  Score=201.07  Aligned_cols=158  Identities=14%  Similarity=0.072  Sum_probs=122.5

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCc-----EEEeecCcceecCcC----------cccCcCCC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMR-----CKVVDFGNACRANKQ----------FAEEIQTR   67 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~-----~kl~dfg~~~~~~~~----------~~~~~~~~   67 (237)
                      +++..+..++.|++.||.|+|..+++||||||+|||++.++.     ++|+|||++......          .....|++
T Consensus       102 ~~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~  181 (330)
T 2izr_A          102 FSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPETKKHIPYREHKSLTGTA  181 (330)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCT
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeeccCCCCCCceEEEEEcccceeeecCCCCccccccccCCcCCCc
Confidence            678899999999999999999999999999999999999887     999999999764322          23557899


Q ss_pred             cccchHHhhhcCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccC
Q 026540           68 QYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHG  147 (237)
Q Consensus        68 ~~~~PE~~~~~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  147 (237)
                      .|+|||++.+..++.++|+||+|++++++++|..||.+....   ........+.......+.                 
T Consensus       182 ~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~---~~~~~~~~i~~~~~~~~~-----------------  241 (330)
T 2izr_A          182 RYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKAD---TLKERYQKIGDTKRATPI-----------------  241 (330)
T ss_dssp             TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCS---SHHHHHHHHHHHHHHSCH-----------------
T ss_pred             cccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccc---cHHHHHHHHHhhhccCCH-----------------
Confidence            999999999988999999999999999999999999865311   111122221111000000                 


Q ss_pred             ccchhccccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhc
Q 026540          148 DLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ  201 (237)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  201 (237)
                                   .       ......+ ++.+++..||..||.+||+++++++
T Consensus       242 -------------~-------~~~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~  274 (330)
T 2izr_A          242 -------------E-------VLCENFP-EMATYLRYVRRLDFFEKPDYDYLRK  274 (330)
T ss_dssp             -------------H-------HHTTTCH-HHHHHHHHHHHCCTTCCCCHHHHHH
T ss_pred             -------------H-------HHhccCh-HHHHHHHHHHhCCCCCCCCHHHHHH
Confidence                         0       0011234 8999999999999999999998876

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=99.96  E-value=8.6e-29  Score=203.49  Aligned_cols=162  Identities=13%  Similarity=0.116  Sum_probs=124.5

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCC--cEEEeecCcceecCcC----------cccCcCCCccc
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDM--RCKVVDFGNACRANKQ----------FAEEIQTRQYR   70 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~--~~kl~dfg~~~~~~~~----------~~~~~~~~~~~   70 (237)
                      +++.++..++.|++.||.|+|..+++||||||+||+++.++  .+||+|||++......          .....+++.|+
T Consensus       148 ~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~  227 (345)
T 2v62_A          148 FKKSTVLQLGIRMLDVLEYIHENEYVHGDIKAANLLLGYKNPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFT  227 (345)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEESSSTTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTC
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCeeCCCcCHHHEEEccCCCCcEEEEeCCCceecccccccccchhccccccCCCcccc
Confidence            67899999999999999999999999999999999998877  9999999999654321          13457899999


Q ss_pred             chHHhhhcCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccc
Q 026540           71 APEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLK  150 (237)
Q Consensus        71 ~PE~~~~~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (237)
                      |||++.+..++.++|+||+|++++++++|..||.....    ................+.....                
T Consensus       228 aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~----~~~~~~~~~~~~~~~~~~~~~~----------------  287 (345)
T 2v62_A          228 SLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLK----DPVAVQTAKTNLLDELPQSVLK----------------  287 (345)
T ss_dssp             CHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTT----CHHHHHHHHHHHHHTTTHHHHH----------------
T ss_pred             CHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCcccccc----ccHHHHHHHHhhcccccHHHHh----------------
Confidence            99999988899999999999999999999999965320    1222222222222222221110                


Q ss_pred             hhccccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhc
Q 026540          151 RIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ  201 (237)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  201 (237)
                                       .......+..+.+++.+||..||.+|||++++++
T Consensus       288 -----------------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~  321 (345)
T 2v62_A          288 -----------------WAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKK  321 (345)
T ss_dssp             -----------------HSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred             -----------------hccccccHHHHHHHHHHHhhcCcccCCCHHHHHH
Confidence                             0001135678999999999999999999999886

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=99.96  E-value=1.6e-29  Score=202.63  Aligned_cols=163  Identities=28%  Similarity=0.358  Sum_probs=125.1

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCC---CcEEEeecCcceecCcC--cccCcCCCcccchHHhhh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGID---MRCKVVDFGNACRANKQ--FAEEIQTRQYRAPEVILR   77 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~---~~~kl~dfg~~~~~~~~--~~~~~~~~~~~~PE~~~~   77 (237)
                      +++.++..++.|++.||.|+|..+++|+||||+||+++.+   +.++|+|||++......  .....+++.|+|||.+.+
T Consensus       118 ~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~  197 (287)
T 2wei_A          118 FSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRG  197 (287)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCCCSSCSCHHHHHTTCCHHHHTT
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCeeccCCChhhEEEecCCCcccEEEeccCcceeecCCCccccccCcccccChHHhcC
Confidence            5788999999999999999999999999999999999764   47999999988654322  233456889999998865


Q ss_pred             cCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccC
Q 026540           78 AGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKF  157 (237)
Q Consensus        78 ~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (237)
                       .++.++|+||+|++++++++|..||.+..      .......+...  ....                           
T Consensus       198 -~~~~~~Di~slG~~l~~l~~g~~p~~~~~------~~~~~~~~~~~--~~~~---------------------------  241 (287)
T 2wei_A          198 -TYDEKCDVWSAGVILYILLSGTPPFYGKN------EYDILKRVETG--KYAF---------------------------  241 (287)
T ss_dssp             -CCCTHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHC--CCCC---------------------------
T ss_pred             -CCCCchhhHhHHHHHHHHHhCCCCCCCCC------HHHHHHHHHcC--CCCC---------------------------
Confidence             48899999999999999999999997652      22222221110  0000                           


Q ss_pred             CchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccC
Q 026540          158 WSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNS  210 (237)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~  210 (237)
                       +.        ......+..+.+||.+||..||.+|||++|+++||||.....
T Consensus       242 -~~--------~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~~~~~~~  285 (287)
T 2wei_A          242 -DL--------PQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKYSS  285 (287)
T ss_dssp             -CS--------GGGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHSHHHHHHCC
T ss_pred             -Cc--------hhhhhcCHHHHHHHHHHcccChhhCcCHHHHhcCHHHhcccc
Confidence             00        001234678899999999999999999999999999986643

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=99.96  E-value=6.8e-29  Score=201.02  Aligned_cols=154  Identities=18%  Similarity=0.110  Sum_probs=121.6

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcCc-----------------ccCcC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQF-----------------AEEIQ   65 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~~-----------------~~~~~   65 (237)
                      +++.++..++.|++.||.|+|+.+++|+||||+||+++.++.+||+|||++.......                 ....|
T Consensus       105 ~~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  184 (310)
T 3s95_A          105 YPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVG  184 (310)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEECTTSCEEECCCTTCEECC--------------------CCCCS
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCccCCCCCcCeEEECCCCCEEEeecccceecccccccccccccccccccccccccCC
Confidence            5778999999999999999999999999999999999999999999999986543221                 14468


Q ss_pred             CCcccchHHhhhcCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcc
Q 026540           66 TRQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDR  145 (237)
Q Consensus        66 ~~~~~~PE~~~~~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  145 (237)
                      ++.|+|||.+.+..++.++|+||+|++++++++|..||...........                               
T Consensus       185 t~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~-------------------------------  233 (310)
T 3s95_A          185 NPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFG-------------------------------  233 (310)
T ss_dssp             CGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSS-------------------------------
T ss_pred             CcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHh-------------------------------
Confidence            9999999999998999999999999999999999988865421100000                               


Q ss_pred             cCccchhccccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhc
Q 026540          146 HGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ  201 (237)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  201 (237)
                                  .......  ....+..+++.+.+++.+||+.||++|||++++++
T Consensus       234 ------------~~~~~~~--~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~  275 (310)
T 3s95_A          234 ------------LNVRGFL--DRYCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEH  275 (310)
T ss_dssp             ------------BCHHHHH--HHTCCTTCCTTHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ------------hhhhccc--cccCCCCCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence                        0000000  11224455678899999999999999999999987

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=99.96  E-value=3.1e-29  Score=204.47  Aligned_cols=153  Identities=17%  Similarity=0.149  Sum_probs=119.7

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC-----cccCcCCCcccchHHhhh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ-----FAEEIQTRQYRAPEVILR   77 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~-----~~~~~~~~~~~~PE~~~~   77 (237)
                      +++..+..++.|++.||.|+|..+++||||||+|||++.++.+||+|||++......     .....++..|+|||.+.+
T Consensus       112 ~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  191 (325)
T 3kex_A          112 LGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHF  191 (325)
T ss_dssp             SCTTHHHHHHHHHHHHHHHHHHTTCCCSCCSSTTEEESSSSCEEECSCSGGGGSCCCTTCCC-----CCTTTSCHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCCCCCccchheEEECCCCeEEECCCCcccccCcccccccccCCCCcccccChHHhcc
Confidence            567889999999999999999999999999999999999999999999998654322     233456778999999999


Q ss_pred             cCCCchhhhhhhhhHHHHHhc-CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcccc
Q 026540           78 AGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLK  156 (237)
Q Consensus        78 ~~~~~~~diws~g~~l~~~~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (237)
                      ..++.++|+||+|++++++++ |..||.+..      .......+...                                
T Consensus       192 ~~~~~~~Di~slG~~l~el~~~g~~p~~~~~------~~~~~~~~~~~--------------------------------  233 (325)
T 3kex_A          192 GKYTHQSDVWSYGVTVWELMTFGAEPYAGLR------LAEVPDLLEKG--------------------------------  233 (325)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHTTSCCTTTTSC------TTHHHHHHHTT--------------------------------
T ss_pred             CCCChhhHhHHhHHHHHHHHhCCCCCccccC------HHHHHHHHHcC--------------------------------
Confidence            999999999999999999999 999997653      11111111000                                


Q ss_pred             CCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcC
Q 026540          157 FWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQH  202 (237)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h  202 (237)
                               .....+..++..+.+++.+||..||.+|||+.+++++
T Consensus       234 ---------~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~  270 (325)
T 3kex_A          234 ---------ERLAQPQICTIDVYMVMVKCWMIDENIRPTFKELANE  270 (325)
T ss_dssp             ---------CBCCCCTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHH
T ss_pred             ---------CCCCCCCcCcHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence                     0111223345667899999999999999999999885

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=99.96  E-value=6.2e-29  Score=207.05  Aligned_cols=153  Identities=20%  Similarity=0.237  Sum_probs=123.2

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCc-----CcccCcCCCcccchHHhhh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK-----QFAEEIQTRQYRAPEVILR   77 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~-----~~~~~~~~~~~~~PE~~~~   77 (237)
                      +++.++..++.|++.||.|+|..+++||||||+|||++.++.+||+|||++.....     ......++..|+|||++.+
T Consensus       188 l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~  267 (382)
T 3tt0_A          188 LSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFD  267 (382)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHS
T ss_pred             cCHHHHHHHHHHHHHHHHHHHhCCEecCCCCcceEEEcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcC
Confidence            78999999999999999999999999999999999999999999999999865432     2223455778999999999


Q ss_pred             cCCCchhhhhhhhhHHHHHhc-CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcccc
Q 026540           78 AGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLK  156 (237)
Q Consensus        78 ~~~~~~~diws~g~~l~~~~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (237)
                      ..++.++|+||+|++++++++ |..||....      .......+...                                
T Consensus       268 ~~~~~~~DiwslG~il~ellt~g~~p~~~~~------~~~~~~~~~~~--------------------------------  309 (382)
T 3tt0_A          268 RIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP------VEELFKLLKEG--------------------------------  309 (382)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC------HHHHHHHHHTT--------------------------------
T ss_pred             CCCCchhHHHHHHHHHHHHHhCCCCCCCCCC------HHHHHHHHHcC--------------------------------
Confidence            899999999999999999999 889987542      21111111000                                


Q ss_pred             CCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcC
Q 026540          157 FWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQH  202 (237)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h  202 (237)
                               .....+..++.++.+|+.+||+.||++|||++|++++
T Consensus       310 ---------~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~  346 (382)
T 3tt0_A          310 ---------HRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED  346 (382)
T ss_dssp             ---------CCCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ---------CCCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence                     0111233456789999999999999999999999985

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=99.96  E-value=1.9e-29  Score=209.07  Aligned_cols=158  Identities=16%  Similarity=0.196  Sum_probs=125.0

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCC---cEEEeecCcceecC-----cCcccCcCCCcccchHH
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDM---RCKVVDFGNACRAN-----KQFAEEIQTRQYRAPEV   74 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~---~~kl~dfg~~~~~~-----~~~~~~~~~~~~~~PE~   74 (237)
                      +++.++..++.|++.||.|+|..+++||||||+|||++.++   .+||+|||++....     .......+++.|+|||+
T Consensus       178 ~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~  257 (367)
T 3l9p_A          178 LAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEA  257 (367)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHH
T ss_pred             ccHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEEecCCCCceEEECCCccccccccccccccCCCcCCcccEECHHH
Confidence            67788999999999999999999999999999999998554   59999999985432     22234566889999999


Q ss_pred             hhhcCCCchhhhhhhhhHHHHHhc-CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhc
Q 026540           75 ILRAGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIR  153 (237)
Q Consensus        75 ~~~~~~~~~~diws~g~~l~~~~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (237)
                      +.+..++.++|+||+|++++++++ |..||....      .......+...                             
T Consensus       258 ~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~------~~~~~~~i~~~-----------------------------  302 (367)
T 3l9p_A          258 FMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS------NQEVLEFVTSG-----------------------------  302 (367)
T ss_dssp             HHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC------HHHHHHHHHTT-----------------------------
T ss_pred             hcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCC------HHHHHHHHHcC-----------------------------
Confidence            999999999999999999999998 889997652      22222211100                             


Q ss_pred             cccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCc
Q 026540          154 RLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSL  207 (237)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~  207 (237)
                                  .....+..++..+.+|+.+||+.||.+|||+++++++.++..
T Consensus       303 ------------~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~  344 (367)
T 3l9p_A          303 ------------GRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCT  344 (367)
T ss_dssp             ------------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             ------------CCCCCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHh
Confidence                        001123345678899999999999999999999999877653

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=99.96  E-value=2.3e-29  Score=205.46  Aligned_cols=153  Identities=16%  Similarity=0.167  Sum_probs=120.8

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC-----cccCcCCCcccchHHhhh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ-----FAEEIQTRQYRAPEVILR   77 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~-----~~~~~~~~~~~~PE~~~~   77 (237)
                      +++..+..++.|++.||.|+|..+++||||||+|||++.++.+||+|||++......     .....++..|+|||.+.+
T Consensus       114 ~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~  193 (327)
T 3poz_A          114 IGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH  193 (327)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCTTHHHHHTTTCC-------CCCGGGSCHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHhhCCeeCCCCChheEEECCCCCEEEccCcceeEccCCcccccccCCCccccccChHHhcc
Confidence            578889999999999999999999999999999999999999999999998654321     123345778999999999


Q ss_pred             cCCCchhhhhhhhhHHHHHhc-CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcccc
Q 026540           78 AGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLK  156 (237)
Q Consensus        78 ~~~~~~~diws~g~~l~~~~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (237)
                      ..++.++|+||+|++++++++ |..||....      .......+ ..                                
T Consensus       194 ~~~~~~~Di~slG~il~ellt~g~~p~~~~~------~~~~~~~~-~~--------------------------------  234 (327)
T 3poz_A          194 RIYTHQSDVWSYGVTVWELMTFGSKPYDGIP------ASEISSIL-EK--------------------------------  234 (327)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC------GGGHHHHH-HT--------------------------------
T ss_pred             CCCCchhhhhhhHHHHHHHHhcCCCCccCCC------HHHHHHHH-Hc--------------------------------
Confidence            999999999999999999999 999997653      11111100 00                                


Q ss_pred             CCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcC
Q 026540          157 FWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQH  202 (237)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h  202 (237)
                              ......+..++..+.+++.+||+.||.+|||+.+++++
T Consensus       235 --------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~  272 (327)
T 3poz_A          235 --------GERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIE  272 (327)
T ss_dssp             --------TCCCCCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHH
T ss_pred             --------CCCCCCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHH
Confidence                    00111234456789999999999999999999999875

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=99.95  E-value=1.1e-28  Score=197.64  Aligned_cols=155  Identities=19%  Similarity=0.130  Sum_probs=123.1

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhc--CCccCCCCCccccCCCCc-----EEEeecCcceecCcCcccCcCCCcccchHHh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASM--GGIELPKPERCLDGIDMR-----CKVVDFGNACRANKQFAEEIQTRQYRAPEVI   75 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~--~~h~d~kp~Nili~~~~~-----~kl~dfg~~~~~~~~~~~~~~~~~~~~PE~~   75 (237)
                      +++..+..++.|++.||.|+|..+  ++|+||||+||+++.++.     ++|+|||++...........+++.|+|||.+
T Consensus       119 ~~~~~~~~~~~~l~~~l~~lH~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~g~~~y~aPE~~  198 (287)
T 4f0f_A          119 IKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHSVSGLLGNFQWMAPETI  198 (287)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHTSSSCCBCSCCSGGGEEESCCCTTCSCCEEECCCTTCBCCSSCEECCCCCCTTSCGGGS
T ss_pred             ccHHHHHHHHHHHHHHHHHHHhCCCCeecCCCCcceEEEeccCCCCceeEEeCCCCccccccccccccCCCccccCchhh
Confidence            678899999999999999999999  999999999999987776     9999999997766666667889999999998


Q ss_pred             h--hcCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhc
Q 026540           76 L--RAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIR  153 (237)
Q Consensus        76 ~--~~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (237)
                      .  ...++.++|+||+|++++++++|..||.....     ............+                           
T Consensus       199 ~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~-----~~~~~~~~~~~~~---------------------------  246 (287)
T 4f0f_A          199 GAEEESYTEKADTYSFAMILYTILTGEGPFDEYSY-----GKIKFINMIREEG---------------------------  246 (287)
T ss_dssp             SCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCC-----CHHHHHHHHHHSC---------------------------
T ss_pred             ccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccc-----cHHHHHHHHhccC---------------------------
Confidence            4  34578899999999999999999999976531     1111111100000                           


Q ss_pred             cccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhc
Q 026540          154 RLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ  201 (237)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  201 (237)
                                  .....+..+++.+.+++.+||+.||.+|||++++++
T Consensus       247 ------------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  282 (287)
T 4f0f_A          247 ------------LRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVK  282 (287)
T ss_dssp             ------------CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ------------CCCCCCcccCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence                        011223455788999999999999999999999985

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=99.95  E-value=2e-29  Score=203.10  Aligned_cols=164  Identities=17%  Similarity=0.172  Sum_probs=119.2

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhh--------hhcCCccCCCCCccccCCCCcEEEeecCcceecCcC-------cccCcCC
Q 026540            2 TIVEKKLKRRAKRAVANISIRR--------ASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ-------FAEEIQT   66 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~--------~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~-------~~~~~~~   66 (237)
                      .+++..+..++.|++.||.|+|        ..+++||||||+|||++.++.+||+|||++......       .....|+
T Consensus       101 ~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt  180 (301)
T 3q4u_A          101 TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGT  180 (301)
T ss_dssp             CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTCEEEETTTTEEECCCCCCCCC
T ss_pred             ccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCCCEEEeeCCCeeecccccccccccccccccc
Confidence            3678899999999999999999        999999999999999999999999999998654322       2234789


Q ss_pred             CcccchHHhhhc------CCCchhhhhhhhhHHHHHhcC----------CcccCCCCCCCCCChHHHHHHHHHHHCCCCH
Q 026540           67 RQYRAPEVILRA------GYSFSVDMWSFACTAFELATG----------DMLFAPKSGQGFCEDEDHLALMMELIGKMPR  130 (237)
Q Consensus        67 ~~~~~PE~~~~~------~~~~~~diws~g~~l~~~~~g----------~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~  130 (237)
                      +.|+|||.+.+.      .++.++|+||+|++++++++|          ..||.......  .............+..  
T Consensus       181 ~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~~--~~~~~~~~~~~~~~~~--  256 (301)
T 3q4u_A          181 KRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPND--PSFEDMRKVVCVDQQR--  256 (301)
T ss_dssp             GGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSS--CCHHHHHHHHTTSCCC--
T ss_pred             cceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCCC--cchhhhhHHHhccCCC--
Confidence            999999999876      344689999999999999999          66665432110  0111111110000000  


Q ss_pred             HHHhcCCCchhhhcccCccchhccccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhc
Q 026540          131 KIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ  201 (237)
Q Consensus       131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  201 (237)
                                               ...+       ........+..+.+|+.+||+.||.+|||++|+++
T Consensus       257 -------------------------~~~~-------~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~  295 (301)
T 3q4u_A          257 -------------------------PNIP-------NRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKK  295 (301)
T ss_dssp             -------------------------CCCC-------GGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHH
T ss_pred             -------------------------CCCC-------hhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHH
Confidence                                     0000       00012345788999999999999999999999985

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=99.95  E-value=1.3e-28  Score=196.84  Aligned_cols=153  Identities=15%  Similarity=0.209  Sum_probs=122.3

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCc----CcccCcCCCcccchHHhhhc
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK----QFAEEIQTRQYRAPEVILRA   78 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~----~~~~~~~~~~~~~PE~~~~~   78 (237)
                      +++.++..++.|++.+|.|+|..+++|+||||+||+++.++.++|+|||++.....    ......+++.|+|||.+.+.
T Consensus       117 ~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  196 (283)
T 3gen_A          117 FQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYS  196 (283)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHHHSTTSTTSCGGGCCHHHHHHC
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCccCCCCccceEEEcCCCCEEEccccccccccccccccccCCccCcccCCHHHhccC
Confidence            67889999999999999999999999999999999999999999999999865432    12233456789999999999


Q ss_pred             CCCchhhhhhhhhHHHHHhc-CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccC
Q 026540           79 GYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKF  157 (237)
Q Consensus        79 ~~~~~~diws~g~~l~~~~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (237)
                      .++.++|+||+|++++++++ |..||....      .......+....                                
T Consensus       197 ~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~------~~~~~~~~~~~~--------------------------------  238 (283)
T 3gen_A          197 KFSSKSDIWAFGVLMWEIYSLGKMPYERFT------NSETAEHIAQGL--------------------------------  238 (283)
T ss_dssp             CCSHHHHHHHHHHHHHHHHTTTCCTTTTSC------HHHHHHHHHTTC--------------------------------
T ss_pred             CCCchhhHHHHHHHHHHHHhCCCCCccccC------hhHHHHHHhccc--------------------------------
Confidence            99999999999999999998 999997653      222222111100                                


Q ss_pred             CchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcC
Q 026540          158 WSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQH  202 (237)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h  202 (237)
                               ....+...+..+.+++.+||+.||.+|||++++++|
T Consensus       239 ---------~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~  274 (283)
T 3gen_A          239 ---------RLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSN  274 (283)
T ss_dssp             ---------CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred             ---------CCCCCCcCCHHHHHHHHHHccCChhHCcCHHHHHHH
Confidence                     011123346788999999999999999999999975

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.95  E-value=1e-28  Score=196.10  Aligned_cols=153  Identities=17%  Similarity=0.209  Sum_probs=122.2

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCc----CcccCcCCCcccchHHhhhc
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK----QFAEEIQTRQYRAPEVILRA   78 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~----~~~~~~~~~~~~~PE~~~~~   78 (237)
                      +++..+..++.|++.||.|+|..+++|+||||+||+++.++.++|+|||++.....    ......++..|+|||.+.+.
T Consensus       103 ~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  182 (269)
T 4hcu_A          103 FAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFS  182 (269)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTTSTTCCGGGCCHHHHHHC
T ss_pred             cCHHHHHHHHHHHHHHHHHHHhCCeecCCcchheEEEcCCCCEEeccccccccccccccccccCcccccccCCHHHhcCC
Confidence            67889999999999999999999999999999999999999999999999865432    22233556789999999999


Q ss_pred             CCCchhhhhhhhhHHHHHhc-CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccC
Q 026540           79 GYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKF  157 (237)
Q Consensus        79 ~~~~~~diws~g~~l~~~~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (237)
                      .++.++|+||+|++++++++ |..||....      .......+...                                 
T Consensus       183 ~~~~~~Di~slG~~l~~ll~~g~~p~~~~~------~~~~~~~~~~~---------------------------------  223 (269)
T 4hcu_A          183 RYSSKSDVWSFGVLMWEVFSEGKIPYENRS------NSEVVEDISTG---------------------------------  223 (269)
T ss_dssp             CCCHHHHHHHHHHHHHHHHTTSCCTTTTCC------HHHHHHHHHTT---------------------------------
T ss_pred             CCCchhhhHHHHHHHHHHhcCCCCCCCCCC------HHHHHHHHhcC---------------------------------
Confidence            99999999999999999999 889997653      22222211100                                 


Q ss_pred             CchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcC
Q 026540          158 WSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQH  202 (237)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h  202 (237)
                              .....+...+..+.+++.+||+.||++|||+++++++
T Consensus       224 --------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~  260 (269)
T 4hcu_A          224 --------FRLYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQ  260 (269)
T ss_dssp             --------CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             --------ccCCCCCcCCHHHHHHHHHHccCCcccCcCHHHHHHH
Confidence                    0111233346788999999999999999999999875

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=99.95  E-value=8.1e-29  Score=202.28  Aligned_cols=152  Identities=15%  Similarity=0.151  Sum_probs=117.1

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC-----cccCcCCCcccchHHhhh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ-----FAEEIQTRQYRAPEVILR   77 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~-----~~~~~~~~~~~~PE~~~~   77 (237)
                      +++..+..++.|++.||.|+|..+++||||||+||+++.++.+||+|||++......     .....++..|+|||.+.+
T Consensus       114 ~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~  193 (327)
T 3lzb_A          114 IGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH  193 (327)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCTTC----------------CCCGGGSCHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHhhCCCcCCCCCHHHEEEcCCCCEEEccCcceeEccCccccccccCCCccccccCHHHHcC
Confidence            578889999999999999999999999999999999999999999999998654321     223345678999999999


Q ss_pred             cCCCchhhhhhhhhHHHHHhc-CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcccc
Q 026540           78 AGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLK  156 (237)
Q Consensus        78 ~~~~~~~diws~g~~l~~~~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (237)
                      ..++.++|+||+|++++++++ |..||.+..      .......+..                                 
T Consensus       194 ~~~~~~~Di~slG~il~ell~~g~~p~~~~~------~~~~~~~~~~---------------------------------  234 (327)
T 3lzb_A          194 RIYTHQSDVWSYGVTVWELMTFGSKPYDGIP------ASEISSILEK---------------------------------  234 (327)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC------GGGHHHHHHT---------------------------------
T ss_pred             CCCChHHHHHHHHHHHHHHHHCCCCCCCCCC------HHHHHHHHHc---------------------------------
Confidence            999999999999999999999 999997653      1111111000                                 


Q ss_pred             CCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhc
Q 026540          157 FWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ  201 (237)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  201 (237)
                              ......+...+..+.+++.+||..||.+|||+.|+++
T Consensus       235 --------~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~  271 (327)
T 3lzb_A          235 --------GERLPQPPICTIDVYMIMRKCWMIDADSRPKFRELII  271 (327)
T ss_dssp             --------TCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             --------CCCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence                    0011223445678999999999999999999999987

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=99.95  E-value=3.4e-29  Score=204.00  Aligned_cols=174  Identities=18%  Similarity=0.134  Sum_probs=120.6

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhh----------cCCccCCCCCccccCCCCcEEEeecCcceecCcC-----cccCcCCC
Q 026540            3 IVEKKLKRRAKRAVANISIRRAS----------MGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ-----FAEEIQTR   67 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~----------~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~-----~~~~~~~~   67 (237)
                      +++.++..++.|++.||.|+|+.          +++||||||+|||++.++.+||+|||++......     .....|++
T Consensus       118 ~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DFg~a~~~~~~~~~~~~~~~~gt~  197 (322)
T 3soc_A          118 VSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTR  197 (322)
T ss_dssp             BCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCCTTCEEECTTSCCCCCTTCCCCG
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEccCCcccccccccCccccccCccCc
Confidence            57889999999999999999999          9999999999999999999999999999654321     22357899


Q ss_pred             cccchHHhhhc-----CCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhh
Q 026540           68 QYRAPEVILRA-----GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDY  142 (237)
Q Consensus        68 ~~~~PE~~~~~-----~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  142 (237)
                      .|+|||++.+.     .++.++|+||+|++++++++|..||.+........-..      .....+...         ..
T Consensus       198 ~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~------~~~~~~~~~---------~~  262 (322)
T 3soc_A          198 RYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEE------EIGQHPSLE---------DM  262 (322)
T ss_dssp             GGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHH------HHCSSCCHH---------HH
T ss_pred             cccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhh------hhccCCchh---------hh
Confidence            99999999863     35567899999999999999999997654221110000      000000000         00


Q ss_pred             hcccCccchhccccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhc
Q 026540          143 FDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ  201 (237)
Q Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  201 (237)
                      ......     .........     .......+..+.+||.+||+.||++|||++|+++
T Consensus       263 ~~~~~~-----~~~~~~~~~-----~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~  311 (322)
T 3soc_A          263 QEVVVH-----KKKRPVLRD-----YWQKHAGMAMLCETIEECWDHDAEARLSAGCVGE  311 (322)
T ss_dssp             HHHHTT-----SCCCCCCCG-----GGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             hhhhhc-----ccCCCCccc-----cccccchHHHHHHHHHHHccCChhhCcCHHHHHH
Confidence            000000     000000000     0012234677999999999999999999999985

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.95  E-value=9.4e-29  Score=210.14  Aligned_cols=152  Identities=16%  Similarity=0.146  Sum_probs=121.5

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcCcccCcCCCcccchHHhhhcCCCc
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSF   82 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~   82 (237)
                      +++..+..++.|++.||.|+|..+++||||||+|||++.++.+||+|||++...........++..|+|||.+.+..++.
T Consensus       286 ~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  365 (450)
T 1k9a_A          286 LGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFST  365 (450)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTSCEEECCCTTCEECC------CCCTTTSCHHHHHSSCCCH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEECCCCCEEEeeCCCcccccccccCCCCCcceeCHHHhcCCCCCc
Confidence            57888999999999999999999999999999999999999999999999976554444446688999999999999999


Q ss_pred             hhhhhhhhhHHHHHhc-CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCchh
Q 026540           83 SVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLD  161 (237)
Q Consensus        83 ~~diws~g~~l~~~~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (237)
                      ++|+||+|++++++++ |..||......      +....+..                                      
T Consensus       366 ~sDvwslG~~l~el~t~g~~P~~~~~~~------~~~~~i~~--------------------------------------  401 (450)
T 1k9a_A          366 KSDVWSFGILLWEIYSFGRVPYPRIPLK------DVVPRVEK--------------------------------------  401 (450)
T ss_dssp             HHHHHHHHHHHHHHHTTTCCSSTTSCTT------THHHHHHT--------------------------------------
T ss_pred             HHHHHHHHHHHHHHHhCCCCCCCCCCHH------HHHHHHHc--------------------------------------
Confidence            9999999999999998 99999765311      11111000                                      


Q ss_pred             HHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhc
Q 026540          162 RLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ  201 (237)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  201 (237)
                         ......+..++..+.++|.+||+.||.+|||+.++++
T Consensus       402 ---~~~~~~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~  438 (450)
T 1k9a_A          402 ---GYKMDAPDGCPPAVYDVMKNCWHLDAATRPTFLQLRE  438 (450)
T ss_dssp             ---TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ---CCCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence               0011234556788999999999999999999999875

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=99.95  E-value=1e-28  Score=200.89  Aligned_cols=161  Identities=18%  Similarity=0.250  Sum_probs=125.7

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC-----cccCcCCCcccchHHhhh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ-----FAEEIQTRQYRAPEVILR   77 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~-----~~~~~~~~~~~~PE~~~~   77 (237)
                      +++.++..++.|++.||.|+|..+++||||||+||+++.++.++|+|||++......     .....+++.|+|||.+.+
T Consensus       135 ~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  214 (322)
T 1p4o_A          135 PSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKD  214 (322)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEECTTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHH
T ss_pred             cCHHHHHHHHHHHHHHHHHHHHCCCccCCCccceEEEcCCCeEEECcCccccccccccccccccCCCCCCCccChhhhcc
Confidence            367889999999999999999999999999999999999999999999998644321     223355778999999999


Q ss_pred             cCCCchhhhhhhhhHHHHHhc-CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcccc
Q 026540           78 AGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLK  156 (237)
Q Consensus        78 ~~~~~~~diws~g~~l~~~~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (237)
                      ..++.++|+||+|++++++++ |..||....      .......+..  +                              
T Consensus       215 ~~~~~~~Di~slG~il~el~~~g~~p~~~~~------~~~~~~~~~~--~------------------------------  256 (322)
T 1p4o_A          215 GVFTTYSDVWSFGVVLWEIATLAEQPYQGLS------NEQVLRFVME--G------------------------------  256 (322)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHTSCCTTTTSC------HHHHHHHHHT--T------------------------------
T ss_pred             CCCCchhhHHHHHHHHHHHHhcCCCccccCC------HHHHHHHHHc--C------------------------------
Confidence            899999999999999999999 788886542      2111111100  0                              


Q ss_pred             CCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcC------CCcCcccC
Q 026540          157 FWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQH------PWLSLRNS  210 (237)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h------p~f~~~~~  210 (237)
                               .....+..++..+.+++.+||+.||.+|||+.|++++      ++|...+.
T Consensus       257 ---------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~~~~~~~~~  307 (322)
T 1p4o_A          257 ---------GLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREVSF  307 (322)
T ss_dssp             ---------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSCTTHHHHCS
T ss_pred             ---------CcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhccCCccccc
Confidence                     0011233456788999999999999999999999986      66655443

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=99.95  E-value=6.9e-29  Score=198.31  Aligned_cols=154  Identities=14%  Similarity=0.158  Sum_probs=114.3

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC----cccCcCCCcccchHHhhh
Q 026540            2 TIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ----FAEEIQTRQYRAPEVILR   77 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~----~~~~~~~~~~~~PE~~~~   77 (237)
                      .+++.++..++.|++.||.|+|..+++||||||+||+++.++.++|+|||++......    .....+++.|+|||.+.+
T Consensus       112 ~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  191 (281)
T 1mp8_A          112 SLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINF  191 (281)
T ss_dssp             TSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECC-------------------CCGGGCCHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHEEECCCCCEEECccccccccCcccccccccCCCcccccChhhccc
Confidence            3678899999999999999999999999999999999999999999999998654322    223345678999999998


Q ss_pred             cCCCchhhhhhhhhHHHHHhc-CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcccc
Q 026540           78 AGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLK  156 (237)
Q Consensus        78 ~~~~~~~diws~g~~l~~~~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (237)
                      ..++.++|+||+|++++++++ |..||.+..      ..+....+...                                
T Consensus       192 ~~~~~~~Di~slG~~l~ell~~g~~pf~~~~------~~~~~~~i~~~--------------------------------  233 (281)
T 1mp8_A          192 RRFTSASDVWMFGVCMWEILMHGVKPFQGVK------NNDVIGRIENG--------------------------------  233 (281)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHTTSCCTTTTCC------GGGHHHHHHTT--------------------------------
T ss_pred             CCCCCccCchHHHHHHHHHHhcCCCCCCcCC------HHHHHHHHHcC--------------------------------
Confidence            899999999999999999996 888997653      11111111000                                


Q ss_pred             CCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcC
Q 026540          157 FWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQH  202 (237)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h  202 (237)
                               .....+..++..+.+++.+||..||.+|||+.+++++
T Consensus       234 ---------~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~  270 (281)
T 1mp8_A          234 ---------ERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQ  270 (281)
T ss_dssp             ---------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ---------CCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence                     0112234557889999999999999999999999863

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=99.95  E-value=1e-28  Score=211.16  Aligned_cols=170  Identities=14%  Similarity=0.091  Sum_probs=129.5

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCcccc---CCCCcEEEeecCcceecCcCc----------ccCcCCCcc
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLD---GIDMRCKVVDFGNACRANKQF----------AEEIQTRQY   69 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili---~~~~~~kl~dfg~~~~~~~~~----------~~~~~~~~~   69 (237)
                      +++.++..++.|++.||.|||..+++||||||+|||+   +.++.+||+|||++.......          ....|+..|
T Consensus       100 l~~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~Y  179 (483)
T 3sv0_A          100 LSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARY  179 (483)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCBCCCCCCCCCCSCTTT
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCEeecccCcceEEEecCCCCCeEEEEeCCcceeccCCccccccccccccccCCCccc
Confidence            6788999999999999999999999999999999999   578899999999997654321          145789999


Q ss_pred             cchHHhhhcCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCcc
Q 026540           70 RAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDL  149 (237)
Q Consensus        70 ~~PE~~~~~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (237)
                      ++||.+.+..++.++|+||+|++++++++|..||.+....   .....+..+....-..                     
T Consensus       180 ~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~---~~~~~~~~i~~~~~~~---------------------  235 (483)
T 3sv0_A          180 ASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAG---TKKQKYEKISEKKVAT---------------------  235 (483)
T ss_dssp             CCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCS---SHHHHHHHHHHHHHHS---------------------
T ss_pred             cCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccch---hHHHHHHHHhhccccc---------------------
Confidence            9999999999999999999999999999999999865321   1112222111110000                     


Q ss_pred             chhccccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhc----------CCCcCcccCCc
Q 026540          150 KRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ----------HPWLSLRNSTR  212 (237)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~----------hp~f~~~~~~~  212 (237)
                               ...       .+...++.++.+|+..||..+|.+||+++++++          ++|+..+++..
T Consensus       236 ---------~~~-------~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~~~~~~~~~~~dW~~  292 (483)
T 3sv0_A          236 ---------SIE-------ALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFIREGFQFDYVFDWTI  292 (483)
T ss_dssp             ---------CHH-------HHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTCCCSSCCHHHH
T ss_pred             ---------cHH-------HHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHHcCCCccCCcCchh
Confidence                     000       011234678999999999999999999998776          56776655543

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=99.95  E-value=6.4e-29  Score=207.93  Aligned_cols=180  Identities=22%  Similarity=0.262  Sum_probs=130.8

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCcccc----CCCCcEEEeecCcceecCc--CcccCcCCCcccchHHhh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLD----GIDMRCKVVDFGNACRANK--QFAEEIQTRQYRAPEVIL   76 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili----~~~~~~kl~dfg~~~~~~~--~~~~~~~~~~~~~PE~~~   76 (237)
                      +++.++..++.|++.||.|+|..+++||||||+||++    +.++.+||+|||++.....  ......|++.|+|||++.
T Consensus       109 l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~  188 (396)
T 4eut_A          109 LPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMYE  188 (396)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEECTTSCEEEEECCGGGCEECCCGGGSSCSSSCCTTCCHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCEEECCcCHHHEEEeecCCCceeEEEecCCCceEccCCCccccccCCccccCHHHhh
Confidence            7899999999999999999999999999999999999    7778899999999976543  233557899999999987


Q ss_pred             h--------cCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCc
Q 026540           77 R--------AGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGD  148 (237)
Q Consensus        77 ~--------~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (237)
                      +        ..++.++|+||+|++++++++|..||.+...     .......+.++....|...+........     + 
T Consensus       189 ~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~-----~~~~~~~~~~~~~~~p~~~~~~~~~~~~-----~-  257 (396)
T 4eut_A          189 RAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEG-----PRRNKEVMYKIITGKPSGAISGVQKAEN-----G-  257 (396)
T ss_dssp             HHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTC-----TTTCHHHHHHHHHSCCTTCCEEEECSTT-----C-
T ss_pred             ccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCc-----ccchHHHHHHHhcCCCcccchhheeccC-----C-
Confidence            6        4567889999999999999999999976542     1222333444443333222111100000     0 


Q ss_pred             cchhccccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhc
Q 026540          149 LKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ  201 (237)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  201 (237)
                              .............+....+..+.+++.+||+.||++|+|+.|+++
T Consensus       258 --------~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~  302 (396)
T 4eut_A          258 --------PIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFA  302 (396)
T ss_dssp             --------CEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHH
T ss_pred             --------CcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHH
Confidence                    000001111223455677889999999999999999999999865

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.95  E-value=2.6e-28  Score=207.70  Aligned_cols=152  Identities=18%  Similarity=0.231  Sum_probs=121.8

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC----cccCcCCCcccchHHhhhc
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ----FAEEIQTRQYRAPEVILRA   78 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~----~~~~~~~~~~~~PE~~~~~   78 (237)
                      +++.++..++.|++.||.|+|+.+++||||||+|||++.++.+||+|||++......    .....++..|+|||++...
T Consensus       281 ~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  360 (454)
T 1qcf_A          281 QPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFG  360 (454)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHHHTTCSSSSCGGGSCHHHHHHC
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCceeccCCCcccccccCHHHhccC
Confidence            567788999999999999999999999999999999999999999999998654321    1223446789999999999


Q ss_pred             CCCchhhhhhhhhHHHHHhc-CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccC
Q 026540           79 GYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKF  157 (237)
Q Consensus        79 ~~~~~~diws~g~~l~~~~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (237)
                      .++.++|+||+|++++++++ |..||.+..      .......+.+..                                
T Consensus       361 ~~~~~~DvwslG~~l~el~t~g~~P~~~~~------~~~~~~~i~~~~--------------------------------  402 (454)
T 1qcf_A          361 SFTIKSDVWSFGILLMEIVTYGRIPYPGMS------NPEVIRALERGY--------------------------------  402 (454)
T ss_dssp             CCCHHHHHHHHHHHHHHHHTTSCCSSTTCC------HHHHHHHHHHTC--------------------------------
T ss_pred             CCCcHHHHHhHHHHHHHHHhCCCCCCCCCC------HHHHHHHHHcCC--------------------------------
Confidence            99999999999999999999 999997653      222222111100                                


Q ss_pred             CchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhc
Q 026540          158 WSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ  201 (237)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  201 (237)
                               ....+..++..+.+++.+||..||.+|||++++++
T Consensus       403 ---------~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~  437 (454)
T 1qcf_A          403 ---------RMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQS  437 (454)
T ss_dssp             ---------CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ---------CCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHH
Confidence                     11123455788999999999999999999999876

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=99.95  E-value=8.8e-29  Score=199.14  Aligned_cols=163  Identities=15%  Similarity=0.145  Sum_probs=121.8

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC----cccCcCCCcccchHHhhhc
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ----FAEEIQTRQYRAPEVILRA   78 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~----~~~~~~~~~~~~PE~~~~~   78 (237)
                      +++.++..++.|++.||.|+|..+++||||||+||+++.++.++|+|||++......    .....|++.|+|||.+.+.
T Consensus       108 ~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  187 (294)
T 4eqm_A          108 LSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGE  187 (294)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCSSSTTC-------------CCSSCCHHHHHTC
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEEeCCCccccccccccccCccccCccccCHhHhcCC
Confidence            678899999999999999999999999999999999999999999999998654322    2334689999999999998


Q ss_pred             CCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHH-CCCCHHHHhcCCCchhhhcccCccchhccccC
Q 026540           79 GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELI-GKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKF  157 (237)
Q Consensus        79 ~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (237)
                      .++.++|+||+|++++++++|..||.+..      .....   .... +..+..                          
T Consensus       188 ~~~~~~Di~slG~~l~~ll~g~~pf~~~~------~~~~~---~~~~~~~~~~~--------------------------  232 (294)
T 4eqm_A          188 ATDECTDIYSIGIVLYEMLVGEPPFNGET------AVSIA---IKHIQDSVPNV--------------------------  232 (294)
T ss_dssp             CCCTTHHHHHHHHHHHHHHHSSCSSCSSC------HHHHH---HHHHSSCCCCH--------------------------
T ss_pred             CCCchHhHHHHHHHHHHHHhCCCCCCCCC------hHHHH---HHHhhccCCCc--------------------------
Confidence            89999999999999999999999997653      11111   1111 110000                          


Q ss_pred             CchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCccc
Q 026540          158 WSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRN  209 (237)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~  209 (237)
                               .......+++.+.+++.+||..||.+||+..+.+.+.|..-..
T Consensus       233 ---------~~~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~  275 (294)
T 4eqm_A          233 ---------TTDVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLH  275 (294)
T ss_dssp             ---------HHHSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSS
T ss_pred             ---------chhcccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHh
Confidence                     0012234567899999999999999999666666666655443

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=99.95  E-value=1.3e-28  Score=195.29  Aligned_cols=153  Identities=20%  Similarity=0.231  Sum_probs=121.5

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC----cccCcCCCcccchHHhhhc
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ----FAEEIQTRQYRAPEVILRA   78 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~----~~~~~~~~~~~~PE~~~~~   78 (237)
                      +++.++..++.|++.||.|+|..+++|+||||+||+++.++.++|+|||++......    .....+++.|+|||.+.+.
T Consensus       101 ~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  180 (268)
T 3sxs_A          101 LEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYF  180 (268)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTEEESSCSGGGEEECTTCCEEECCTTCEEECCTTCEEECCSCCCCGGGCCHHHHHHS
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCeecCCcCcceEEECCCCCEEEccCccceecchhhhhcccCCCcCcccCCHHHHhcc
Confidence            678999999999999999999999999999999999999999999999998654422    1223445679999999988


Q ss_pred             CCCchhhhhhhhhHHHHHhc-CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccC
Q 026540           79 GYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKF  157 (237)
Q Consensus        79 ~~~~~~diws~g~~l~~~~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (237)
                      .++.++|+||+|++++++++ |..||....      .......+...                                 
T Consensus       181 ~~~~~~Di~slG~il~~l~~~g~~p~~~~~------~~~~~~~~~~~---------------------------------  221 (268)
T 3sxs_A          181 KYSSKSDVWAFGILMWEVFSLGKMPYDLYT------NSEVVLKVSQG---------------------------------  221 (268)
T ss_dssp             EEETTHHHHHHHHHHHHHHTTTCCTTTTSC------HHHHHHHHHTT---------------------------------
T ss_pred             CCchhhhhHHHHHHHHHHHcCCCCCccccC------hHHHHHHHHcC---------------------------------
Confidence            89999999999999999998 999997552      22111111000                                 


Q ss_pred             CchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcC
Q 026540          158 WSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQH  202 (237)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h  202 (237)
                              .....+...++.+.+++.+||+.||.+|||+++++++
T Consensus       222 --------~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~  258 (268)
T 3sxs_A          222 --------HRLYRPHLASDTIYQIMYSCWHELPEKRPTFQQLLSS  258 (268)
T ss_dssp             --------CCCCCCTTSCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred             --------CCCCCCCcChHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence                    0011123346788999999999999999999999975

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=99.95  E-value=1.7e-28  Score=202.18  Aligned_cols=161  Identities=11%  Similarity=0.076  Sum_probs=123.1

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCC--cEEEeecCcceecCcC----------cccCcCCCccc
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDM--RCKVVDFGNACRANKQ----------FAEEIQTRQYR   70 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~--~~kl~dfg~~~~~~~~----------~~~~~~~~~~~   70 (237)
                      +++.++..++.|++.||.|+|..+++||||||+||+++.++  .++|+|||++......          .....+++.|+
T Consensus       156 l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~  235 (352)
T 2jii_A          156 LSERSVLQVACRLLDALEFLHENEYVHGNVTAENIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFI  235 (352)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCGGGEEEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTC
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEEcCCCCceEEEecCcceeeccCCCccccccccccccccCCcccc
Confidence            67899999999999999999999999999999999999988  8999999998654321          13347889999


Q ss_pred             chHHhhhcCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHH-HHHHCCCCHHHHhcCCCchhhhcccCcc
Q 026540           71 APEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALM-MELIGKMPRKIAIGGAQSKDYFDRHGDL  149 (237)
Q Consensus        71 ~PE~~~~~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (237)
                      |||.+.+..++.++|+||+|++++++++|..||....     ......... .......+..           .      
T Consensus       236 aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~-----~~~~~~~~~~~~~~~~~~~~-----------~------  293 (352)
T 2jii_A          236 SMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCL-----PNTEDIMKQKQKFVDKPGPF-----------V------  293 (352)
T ss_dssp             CHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGT-----TCHHHHHHHHHHHHHSCCCE-----------E------
T ss_pred             CHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccCC-----cCHHHHHHHHHhccCChhhh-----------h------
Confidence            9999998889999999999999999999999997653     122222211 1111110000           0      


Q ss_pred             chhccccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhc
Q 026540          150 KRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ  201 (237)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  201 (237)
                                      .........+..+.+|+.+||..||.+|||++++++
T Consensus       294 ----------------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~  329 (352)
T 2jii_A          294 ----------------GPCGHWIRPSETLQKYLKVVMALTYEEKPPYAMLRN  329 (352)
T ss_dssp             ----------------CTTSCEECCCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred             ----------------hhccccCCCcHHHHHHHHHHHhCChhhCCCHHHHHH
Confidence                            000001134678999999999999999999999986

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=99.95  E-value=3.4e-28  Score=195.09  Aligned_cols=157  Identities=23%  Similarity=0.293  Sum_probs=115.7

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecC-----cCcccCcCCCcccchHHhh-
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRAN-----KQFAEEIQTRQYRAPEVIL-   76 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~-----~~~~~~~~~~~~~~PE~~~-   76 (237)
                      +++.++..++.|++.+|.|+|..+++|+||||+||+++.++.++|+|||++....     .......+++.|+|||.+. 
T Consensus       117 ~~~~~~~~i~~qi~~~L~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  196 (289)
T 3og7_A          117 FEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRM  196 (289)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTTEEEECCCC------------------CCCTTCCHHHHC-
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEECCCCCEEEccceeccccccccccccccccCCCccccCchhhcc
Confidence            5678899999999999999999999999999999999999999999999986433     1223456799999999987 


Q ss_pred             --hcCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcc
Q 026540           77 --RAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRR  154 (237)
Q Consensus        77 --~~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (237)
                        +..++.++|+||+|++++++++|..||....      ...............+                         
T Consensus       197 ~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~------~~~~~~~~~~~~~~~~-------------------------  245 (289)
T 3og7_A          197 QDSNPYSFQSDVYAFGIVLYELMTGQLPYSNIN------NRDQIIEMVGRGSLSP-------------------------  245 (289)
T ss_dssp             ---CCSCHHHHHHHHHHHHHHHHHSSCTTSSCC------CHHHHHHHHHHTSCCC-------------------------
T ss_pred             cCCCCCCcccchHHHHHHHHHHHHCCCCccccc------hHHHHHHHhcccccCc-------------------------
Confidence              4568889999999999999999999997653      2222222211100000                         


Q ss_pred             ccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhc
Q 026540          155 LKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ  201 (237)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  201 (237)
                                 ........++..+.+|+.+||+.||.+|||++++++
T Consensus       246 -----------~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~  281 (289)
T 3og7_A          246 -----------DLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILA  281 (289)
T ss_dssp             -----------CTTSSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             -----------chhhccccCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence                       001123345688999999999999999999999985

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=99.95  E-value=1.8e-28  Score=199.54  Aligned_cols=170  Identities=16%  Similarity=0.134  Sum_probs=125.9

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC-----cccCcCCCcccchHHhhh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ-----FAEEIQTRQYRAPEVILR   77 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~-----~~~~~~~~~~~~PE~~~~   77 (237)
                      +++.++..++.|++.||.|+|..+++||||||+||+++.++.+||+|||++......     .....|++.|+|||.+.+
T Consensus       136 ~~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  215 (321)
T 2qkw_B          136 MSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLSTVVKGTLGYIDPEYFIK  215 (321)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTEECSCCCSTTEEECTTCCEEECCCTTCEECSSSSCCCCBCCCEEETTTCCHHHHHH
T ss_pred             cCHHHHHHHHHHHHHHHHHhcCCCeecCCCCHHHEEECCCCCEEEeecccccccccccccccccccCCCccccCHHHhcC
Confidence            678899999999999999999999999999999999999999999999998654321     223457889999999999


Q ss_pred             cCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccC
Q 026540           78 AGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKF  157 (237)
Q Consensus        78 ~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (237)
                      ..++.++|+||+|++++++++|..||........... ...  ......                   .+......   .
T Consensus       216 ~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~-~~~--~~~~~~-------------------~~~~~~~~---~  270 (321)
T 2qkw_B          216 GRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNL-AEW--AVESHN-------------------NGQLEQIV---D  270 (321)
T ss_dssp             CBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCH-HHH--THHHHT-------------------TTCCCSSS---S
T ss_pred             CCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHH-HHH--hhhccc-------------------cccHHHhc---C
Confidence            8999999999999999999999999976542211100 000  000000                   00000000   0


Q ss_pred             CchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCC
Q 026540          158 WSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHP  203 (237)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp  203 (237)
                      .      ......+...+..+.+++.+||+.||++|||++|++++-
T Consensus       271 ~------~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L  310 (321)
T 2qkw_B          271 P------NLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKL  310 (321)
T ss_dssp             S------SCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred             h------hhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHH
Confidence            0      001123456788999999999999999999999999753

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=99.95  E-value=1.2e-28  Score=202.22  Aligned_cols=155  Identities=15%  Similarity=0.139  Sum_probs=122.5

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcCc-----ccCcCCCcccchHHhhh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQF-----AEEIQTRQYRAPEVILR   77 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~~-----~~~~~~~~~~~PE~~~~   77 (237)
                      +++.++..++.|++.||.|+|..+++||||||+||+++.++.++|+|||++.......     ....+++.|+|||.+.+
T Consensus       169 l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~  248 (344)
T 1rjb_A          169 LTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFE  248 (344)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhcc
Confidence            6788899999999999999999999999999999999999999999999986543221     22345678999999999


Q ss_pred             cCCCchhhhhhhhhHHHHHhc-CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcccc
Q 026540           78 AGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLK  156 (237)
Q Consensus        78 ~~~~~~~diws~g~~l~~~~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (237)
                      ..++.++|+||+|++++++++ |..||.+..     ... .........                               
T Consensus       249 ~~~~~~~Di~slG~il~el~t~g~~p~~~~~-----~~~-~~~~~~~~~-------------------------------  291 (344)
T 1rjb_A          249 GIYTIKSDVWSYGILLWEIFSLGVNPYPGIP-----VDA-NFYKLIQNG-------------------------------  291 (344)
T ss_dssp             CCCCHHHHHHHHHHHHHHHTTTSCCSSTTCC-----CSH-HHHHHHHTT-------------------------------
T ss_pred             CCCChhHhHHHHHHHHHHHHcCCCCCcccCC-----cHH-HHHHHHhcC-------------------------------
Confidence            999999999999999999998 999997653     111 111110000                               


Q ss_pred             CCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCC
Q 026540          157 FWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHP  203 (237)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp  203 (237)
                               .....+...+..+.+|+.+||..||.+|||+.+++++-
T Consensus       292 ---------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l  329 (344)
T 1rjb_A          292 ---------FKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFL  329 (344)
T ss_dssp             ---------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred             ---------CCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHH
Confidence                     00112334567899999999999999999999999864

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=99.95  E-value=2.3e-28  Score=194.91  Aligned_cols=152  Identities=16%  Similarity=0.143  Sum_probs=116.0

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcCcccCcCCCcccchHHhhhcCCCc
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSF   82 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~   82 (237)
                      +++..+..++.|++.+|.|+|..+++|+||||+||+++.++.++|+|||++...........++..|+|||.+.+..++.
T Consensus       114 ~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  193 (278)
T 1byg_A          114 LGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFST  193 (278)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEECCCCC------------CCTTTSCHHHHHHCCCCH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCccccCCCcceEEEeCCCcEEEeeccccccccccccCCCccccccCHHHhCCCCCCc
Confidence            56788999999999999999999999999999999999999999999999876555444556788999999999989999


Q ss_pred             hhhhhhhhhHHHHHhc-CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCchh
Q 026540           83 SVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLD  161 (237)
Q Consensus        83 ~~diws~g~~l~~~~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (237)
                      ++|+||+|++++++++ |..||....      .......+..                                      
T Consensus       194 ~~Di~slG~il~~l~t~g~~p~~~~~------~~~~~~~~~~--------------------------------------  229 (278)
T 1byg_A          194 KSDVWSFGILLWEIYSFGRVPYPRIP------LKDVVPRVEK--------------------------------------  229 (278)
T ss_dssp             HHHHHHHHHHHHHHHTTSCCSCTTSC------GGGHHHHHTT--------------------------------------
T ss_pred             hhcHHHHHHHHHHHHhCCCCCCCCCC------HHHHHHHHhc--------------------------------------
Confidence            9999999999999998 999986542      1111110000                                      


Q ss_pred             HHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhc
Q 026540          162 RLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ  201 (237)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  201 (237)
                         ......+...+..+.+++.+||+.||.+|||+.|+++
T Consensus       230 ---~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~  266 (278)
T 1byg_A          230 ---GYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLRE  266 (278)
T ss_dssp             ---TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ---CCCCCCcccCCHHHHHHHHHHhcCChhhCCCHHHHHH
Confidence               0011223445788999999999999999999999885

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=99.95  E-value=3e-28  Score=197.22  Aligned_cols=154  Identities=20%  Similarity=0.219  Sum_probs=122.2

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcCc-----ccCcCCCcccchHHhhh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQF-----AEEIQTRQYRAPEVILR   77 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~~-----~~~~~~~~~~~PE~~~~   77 (237)
                      +++.++..++.|++.||.|+|..+++|+||||+||+++.++.++|+|||++.......     ....+++.|+|||.+.+
T Consensus       142 ~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  221 (313)
T 1t46_A          142 LDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFN  221 (313)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcC
Confidence            7889999999999999999999999999999999999999999999999986554321     22345678999999999


Q ss_pred             cCCCchhhhhhhhhHHHHHhc-CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcccc
Q 026540           78 AGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLK  156 (237)
Q Consensus        78 ~~~~~~~diws~g~~l~~~~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (237)
                      ..++.++|+||+|++++++++ |..||....     .. ..........                               
T Consensus       222 ~~~~~~~Di~slG~il~ellt~g~~p~~~~~-----~~-~~~~~~~~~~-------------------------------  264 (313)
T 1t46_A          222 CVYTFESDVWSYGIFLWELFSLGSSPYPGMP-----VD-SKFYKMIKEG-------------------------------  264 (313)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHTTTCCSSTTCC-----SS-HHHHHHHHHT-------------------------------
T ss_pred             CCCChHHHHHHHHHHHHHHHhCCCCCCCccc-----ch-hHHHHHhccC-------------------------------
Confidence            999999999999999999998 899987653     11 1111111100                               


Q ss_pred             CCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcC
Q 026540          157 FWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQH  202 (237)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h  202 (237)
                               .....+...+..+.+++.+||+.||.+|||++|++++
T Consensus       265 ---------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~  301 (313)
T 1t46_A          265 ---------FRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQL  301 (313)
T ss_dssp             ---------CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ---------CCCCCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHH
Confidence                     0011123456789999999999999999999999864

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=99.95  E-value=2.4e-28  Score=197.99  Aligned_cols=154  Identities=19%  Similarity=0.234  Sum_probs=122.7

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC-----cccCcCCCcccchHHhhh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ-----FAEEIQTRQYRAPEVILR   77 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~-----~~~~~~~~~~~~PE~~~~   77 (237)
                      +++.++..++.|++.||.|+|..+++|+||||+||+++.++.++|+|||++......     .....+++.|+|||++.+
T Consensus       145 ~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~  224 (316)
T 2xir_A          145 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFD  224 (316)
T ss_dssp             EEHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHH
T ss_pred             cCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhcc
Confidence            788999999999999999999999999999999999999999999999998654322     123355778999999999


Q ss_pred             cCCCchhhhhhhhhHHHHHhc-CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcccc
Q 026540           78 AGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLK  156 (237)
Q Consensus        78 ~~~~~~~diws~g~~l~~~~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (237)
                      ..++.++|+||+|++++++++ |..||....     ........+...                                
T Consensus       225 ~~~~~~~Di~slG~il~~l~t~g~~p~~~~~-----~~~~~~~~~~~~--------------------------------  267 (316)
T 2xir_A          225 RVYTIQSDVWSFGVLLWEIFSLGASPYPGVK-----IDEEFCRRLKEG--------------------------------  267 (316)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC-----CSHHHHHHHHHT--------------------------------
T ss_pred             ccccchhHHHHHHHHHHHHHhCCCCCCcccc-----hhHHHHHHhccC--------------------------------
Confidence            999999999999999999998 999997653     111111111000                                


Q ss_pred             CCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcC
Q 026540          157 FWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQH  202 (237)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h  202 (237)
                               .....+...+..+.+++.+||+.||.+|||+.++++|
T Consensus       268 ---------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~  304 (316)
T 2xir_A          268 ---------TRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH  304 (316)
T ss_dssp             ---------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ---------ccCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence                     0111233456788999999999999999999999976

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=99.95  E-value=2.1e-28  Score=199.66  Aligned_cols=152  Identities=16%  Similarity=0.179  Sum_probs=120.4

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC------cccCcCCCcccchHHhh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ------FAEEIQTRQYRAPEVIL   76 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~------~~~~~~~~~~~~PE~~~   76 (237)
                      +++.++..++.|++.||.|+|..+++||||||+||+++.++.++|+|||++......      .....++..|+|||.+.
T Consensus       148 ~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~  227 (325)
T 3kul_A          148 FTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIA  227 (325)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCSSCEECC----CCEECC---CCGGGSCHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEECCCCCEEECCCCcccccccCccceeeccCCCCcccccCHhHhc
Confidence            678899999999999999999999999999999999999999999999999765422      11224466799999999


Q ss_pred             hcCCCchhhhhhhhhHHHHHhc-CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccc
Q 026540           77 RAGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRL  155 (237)
Q Consensus        77 ~~~~~~~~diws~g~~l~~~~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (237)
                      +..++.++|+||+|++++++++ |..||....      .......+...                               
T Consensus       228 ~~~~~~~~Di~slG~il~ell~~g~~p~~~~~------~~~~~~~~~~~-------------------------------  270 (325)
T 3kul_A          228 FRTFSSASDVWSFGVVMWEVLAYGERPYWNMT------NRDVISSVEEG-------------------------------  270 (325)
T ss_dssp             HCEECHHHHHHHHHHHHHHHHTTSCCTTTTSC------HHHHHHHHHTT-------------------------------
T ss_pred             CCCCCcHHHHHHHHHHHHHHHcCCCCCcccCC------HHHHHHHHHcC-------------------------------
Confidence            8889999999999999999998 999997653      22222111100                               


Q ss_pred             cCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhc
Q 026540          156 KFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ  201 (237)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  201 (237)
                                .....+..++..+.+|+.+||..||.+|||++++++
T Consensus       271 ----------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~  306 (325)
T 3kul_A          271 ----------YRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVS  306 (325)
T ss_dssp             ----------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ----------CCCCCCCCcCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence                      011123345778999999999999999999999986

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=99.95  E-value=6.2e-28  Score=195.32  Aligned_cols=163  Identities=15%  Similarity=0.214  Sum_probs=119.0

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhh---hcCCccCCCCCccccCCCCc-EEEeecCcceecCcCcccCcCCCcccchHHhhhc
Q 026540            3 IVEKKLKRRAKRAVANISIRRA---SMGGIELPKPERCLDGIDMR-CKVVDFGNACRANKQFAEEIQTRQYRAPEVILRA   78 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~---~~~~h~d~kp~Nili~~~~~-~kl~dfg~~~~~~~~~~~~~~~~~~~~PE~~~~~   78 (237)
                      +++.++..++.|++.||.|+|.   .+++||||||+||+++.++. +||+|||++...........|++.|+|||.+.+.
T Consensus        99 ~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~  178 (307)
T 2eva_A           99 YTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKGSAAWMAPEVFEGS  178 (307)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC------------CCTTSSCHHHHTCC
T ss_pred             cCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccccccCCCCCceEChhhhCCC
Confidence            4678889999999999999999   78999999999999988775 7999999987665555566789999999999988


Q ss_pred             CCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCC
Q 026540           79 GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFW  158 (237)
Q Consensus        79 ~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (237)
                      .++.++|+||+|++++++++|..||.....     ...  ..+......                               
T Consensus       179 ~~~~~~Di~slG~il~el~~g~~p~~~~~~-----~~~--~~~~~~~~~-------------------------------  220 (307)
T 2eva_A          179 NYSEKCDVFSWGIILWEVITRRKPFDEIGG-----PAF--RIMWAVHNG-------------------------------  220 (307)
T ss_dssp             CCCTHHHHHHHHHHHHHHHHTCCTTTTTCS-----SHH--HHHHHHHTT-------------------------------
T ss_pred             CCCcHHHHHHHHHHHHHHHHCCCCchhhCc-----cHH--HHHHHHhcC-------------------------------
Confidence            899999999999999999999999975421     111  111010000                               


Q ss_pred             chhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhc-----CCCcCcccC
Q 026540          159 SLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ-----HPWLSLRNS  210 (237)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~-----hp~f~~~~~  210 (237)
                             ........++..+.+++.+||+.||.+|||++++++     ..++.+...
T Consensus       221 -------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~~~~~  270 (307)
T 2eva_A          221 -------TRPPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFPGADE  270 (307)
T ss_dssp             -------CCCCCBTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGGGCCCTTS
T ss_pred             -------CCCCcccccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhccCCCC
Confidence                   001112344678899999999999999999999988     356654443

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=99.95  E-value=1.6e-28  Score=198.81  Aligned_cols=153  Identities=16%  Similarity=0.176  Sum_probs=122.4

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC-----cccCcCCCcccchHHhhh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ-----FAEEIQTRQYRAPEVILR   77 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~-----~~~~~~~~~~~~PE~~~~   77 (237)
                      +++.++..++.|++.||.|+|..+++|+||||+||+++.++.++|+|||++......     .....+++.|+|||.+.+
T Consensus       147 ~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  226 (314)
T 2ivs_A          147 LTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFD  226 (314)
T ss_dssp             ECHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHH
T ss_pred             cCHHHHHHHHHHHHHHHHHHHHCCCcccccchheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcC
Confidence            678899999999999999999999999999999999999999999999998755322     223355778999999998


Q ss_pred             cCCCchhhhhhhhhHHHHHhc-CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcccc
Q 026540           78 AGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLK  156 (237)
Q Consensus        78 ~~~~~~~diws~g~~l~~~~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (237)
                      ..++.++|+||+|++++++++ |..||.+..      .......+...                                
T Consensus       227 ~~~~~~~Di~slG~il~el~t~g~~p~~~~~------~~~~~~~~~~~--------------------------------  268 (314)
T 2ivs_A          227 HIYTTQSDVWSFGVLLWEIVTLGGNPYPGIP------PERLFNLLKTG--------------------------------  268 (314)
T ss_dssp             CEECHHHHHHHHHHHHHHHHTTSCCSSTTCC------GGGHHHHHHTT--------------------------------
T ss_pred             CCcCchhhHHHHHHHHHHHHhCCCCCCCCCC------HHHHHHHhhcC--------------------------------
Confidence            889999999999999999999 999997653      11111110000                                


Q ss_pred             CCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcC
Q 026540          157 FWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQH  202 (237)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h  202 (237)
                               .....+..++..+.+++.+||+.||.+|||+++++++
T Consensus       269 ---------~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~  305 (314)
T 2ivs_A          269 ---------HRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKD  305 (314)
T ss_dssp             ---------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ---------CcCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence                     0111233457889999999999999999999999864

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=99.95  E-value=9.1e-29  Score=201.58  Aligned_cols=174  Identities=17%  Similarity=0.118  Sum_probs=126.3

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhh---cCCccCCCCCccccCCCCcEEEeecCcceecCcC----cccCcCCCcccchHHh
Q 026540            3 IVEKKLKRRAKRAVANISIRRAS---MGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ----FAEEIQTRQYRAPEVI   75 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~---~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~----~~~~~~~~~~~~PE~~   75 (237)
                      +++..+..++.|++.||.|+|..   +++||||||+||+++.++.++|+|||++......    .....|++.|+|||.+
T Consensus       128 ~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~  207 (326)
T 3uim_A          128 LDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYL  207 (326)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEECCCSSCEECCSSSSCEECCCCSCGGGCCHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEeccCccccccCcccccccccccCCcCccCHHHh
Confidence            67889999999999999999999   9999999999999999999999999999754321    2234589999999999


Q ss_pred             hhcCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccc
Q 026540           76 LRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRL  155 (237)
Q Consensus        76 ~~~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (237)
                      .+..++.++|+||+|++++++++|..||........ ......    ...        ......       ......   
T Consensus       208 ~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~~~~~~----~~~--------~~~~~~-------~~~~~~---  264 (326)
T 3uim_A          208 STGKSSEKTDVFGYGVMLLELITGQRAFDLARLAND-DDVMLL----DWV--------KGLLKE-------KKLEAL---  264 (326)
T ss_dssp             HHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTT-SCSBHH----HHH--------TTTTSS-------CCSTTS---
T ss_pred             ccCCCCccccchhHHHHHHHHHhCCCcccccccccc-cchhHH----HHH--------HHHhhc-------hhhhhh---
Confidence            988899999999999999999999999952210000 000000    000        000000       000000   


Q ss_pred             cCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCc
Q 026540          156 KFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL  205 (237)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f  205 (237)
                          ..  ...........+..+.+++.+||+.||.+|||++|+++|-.-
T Consensus       265 ----~~--~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~  308 (326)
T 3uim_A          265 ----VD--VDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEG  308 (326)
T ss_dssp             ----SC--TTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHT
T ss_pred             ----cC--hhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcC
Confidence                00  000123355678899999999999999999999999997543

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=99.95  E-value=2.7e-28  Score=194.79  Aligned_cols=153  Identities=14%  Similarity=0.155  Sum_probs=120.4

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC----cccCcCCCcccchHHhhhc
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ----FAEEIQTRQYRAPEVILRA   78 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~----~~~~~~~~~~~~PE~~~~~   78 (237)
                      +++..+..++.|++.||.|+|..+++|+||||+||+++.++.++|+|||++......    .....++..|+|||.+.+.
T Consensus       110 ~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  189 (281)
T 3cc6_A          110 LKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFR  189 (281)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEEETTEEEECCCCGGGCC---------CCCCCGGGCCHHHHHHC
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEECCCCcEEeCccCCCcccccccccccccCCCCcceeCchhhccC
Confidence            678889999999999999999999999999999999999999999999998654322    2233557789999999988


Q ss_pred             CCCchhhhhhhhhHHHHHhc-CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccC
Q 026540           79 GYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKF  157 (237)
Q Consensus        79 ~~~~~~diws~g~~l~~~~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (237)
                      .++.++|+||+|++++++++ |..||....      .......+...                                 
T Consensus       190 ~~~~~~Di~slG~il~~llt~g~~p~~~~~------~~~~~~~~~~~---------------------------------  230 (281)
T 3cc6_A          190 RFTTASDVWMFAVCMWEILSFGKQPFFWLE------NKDVIGVLEKG---------------------------------  230 (281)
T ss_dssp             CCCHHHHHHHHHHHHHHHHTTTCCTTTTSC------GGGHHHHHHHT---------------------------------
T ss_pred             CCCchhccHHHHHHHHHHHhCCCCCcccCC------hHHHHHHHhcC---------------------------------
Confidence            99999999999999999998 999997542      11111111000                                 


Q ss_pred             CchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcC
Q 026540          158 WSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQH  202 (237)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h  202 (237)
                              .....+..+++.+.+++.+||..||.+|||+.+++++
T Consensus       231 --------~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~  267 (281)
T 3cc6_A          231 --------DRLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCS  267 (281)
T ss_dssp             --------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             --------CCCCCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHH
Confidence                    0111233456789999999999999999999999864

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=99.95  E-value=3.6e-28  Score=192.94  Aligned_cols=154  Identities=21%  Similarity=0.199  Sum_probs=116.6

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhc---CCccCCCCCccccCC--------CCcEEEeecCcceecCcC-cccCcCCCccc
Q 026540            3 IVEKKLKRRAKRAVANISIRRASM---GGIELPKPERCLDGI--------DMRCKVVDFGNACRANKQ-FAEEIQTRQYR   70 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~---~~h~d~kp~Nili~~--------~~~~kl~dfg~~~~~~~~-~~~~~~~~~~~   70 (237)
                      +++..+..++.|++.||.|+|..+   ++|+||||+||+++.        ++.++|+|||++...... .....+++.|+
T Consensus       102 ~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~y~  181 (271)
T 3dtc_A          102 IPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSAAGAYAWM  181 (271)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC-------------CCGGGS
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCCcccccccccccCCCCcccee
Confidence            578899999999999999999999   889999999999986        678999999998654422 23457789999


Q ss_pred             chHHhhhcCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccc
Q 026540           71 APEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLK  150 (237)
Q Consensus        71 ~PE~~~~~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (237)
                      |||.+.+..++.++|+||+|++++++++|..||.+..      .........  ...                       
T Consensus       182 aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~------~~~~~~~~~--~~~-----------------------  230 (271)
T 3dtc_A          182 APEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGID------GLAVAYGVA--MNK-----------------------  230 (271)
T ss_dssp             CHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSC------HHHHHHHHH--TSC-----------------------
T ss_pred             CHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC------HHHHHHhhh--cCC-----------------------
Confidence            9999999899999999999999999999999997652      111111000  000                       


Q ss_pred             hhccccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcC
Q 026540          151 RIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQH  202 (237)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h  202 (237)
                                     .....+..++..+.+++.+||+.||.+|||+.|++++
T Consensus       231 ---------------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~  267 (271)
T 3dtc_A          231 ---------------LALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQ  267 (271)
T ss_dssp             ---------------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ---------------CCCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHH
Confidence                           0111234456789999999999999999999999864

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=99.95  E-value=2.4e-28  Score=200.28  Aligned_cols=153  Identities=16%  Similarity=0.223  Sum_probs=121.0

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCc-----CcccCcCCCcccchHHhhh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK-----QFAEEIQTRQYRAPEVILR   77 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~-----~~~~~~~~~~~~~PE~~~~   77 (237)
                      +++.++..++.|++.||.|+|..+++||||||+||+++.++.+||+|||++.....     ......+++.|+|||.+.+
T Consensus       171 l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~  250 (343)
T 1luf_A          171 LSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFY  250 (343)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhcc
Confidence            67788999999999999999999999999999999999999999999999864321     1223456788999999999


Q ss_pred             cCCCchhhhhhhhhHHHHHhc-CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcccc
Q 026540           78 AGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLK  156 (237)
Q Consensus        78 ~~~~~~~diws~g~~l~~~~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (237)
                      ..++.++|+||+|++++++++ |..||.+..      .......+..  +                              
T Consensus       251 ~~~~~~~Di~slG~il~el~t~g~~p~~~~~------~~~~~~~~~~--~------------------------------  292 (343)
T 1luf_A          251 NRYTTESDVWAYGVVLWEIFSYGLQPYYGMA------HEEVIYYVRD--G------------------------------  292 (343)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHTTTCCTTTTSC------HHHHHHHHHT--T------------------------------
T ss_pred             CCcCcccccHHHHHHHHHHHhcCCCcCCCCC------hHHHHHHHhC--C------------------------------
Confidence            999999999999999999998 889997542      2111111100  0                              


Q ss_pred             CCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcC
Q 026540          157 FWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQH  202 (237)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h  202 (237)
                               .....+..++..+.+++.+||..||.+|||+.+++++
T Consensus       293 ---------~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~  329 (343)
T 1luf_A          293 ---------NILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRI  329 (343)
T ss_dssp             ---------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ---------CcCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHH
Confidence                     0011233456789999999999999999999999863

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=99.95  E-value=3.8e-28  Score=196.83  Aligned_cols=153  Identities=18%  Similarity=0.167  Sum_probs=117.3

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC-----cccCcCCCcccchHHhhh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ-----FAEEIQTRQYRAPEVILR   77 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~-----~~~~~~~~~~~~PE~~~~   77 (237)
                      +++.++..++.|++.||.|+|..+++|+||||+||+++.++.+||+|||++......     .....+++.|+|||.+.+
T Consensus       144 ~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  223 (313)
T 3brb_A          144 IPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLAD  223 (313)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHTTTCCCCCCSGGGEEECTTSCEEECSCSCC----------------CCGGGSCHHHHHS
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCcEEEeecCcceecccccccCcccccCCCccccCchhhcC
Confidence            678899999999999999999999999999999999999999999999998654321     223345778999999998


Q ss_pred             cCCCchhhhhhhhhHHHHHhc-CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcccc
Q 026540           78 AGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLK  156 (237)
Q Consensus        78 ~~~~~~~diws~g~~l~~~~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (237)
                      ..++.++|+||+|++++++++ |..||....      .......+...                                
T Consensus       224 ~~~~~~~Di~slG~il~el~~~g~~p~~~~~------~~~~~~~~~~~--------------------------------  265 (313)
T 3brb_A          224 RVYTSKSDVWAFGVTMWEIATRGMTPYPGVQ------NHEMYDYLLHG--------------------------------  265 (313)
T ss_dssp             SCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC------GGGHHHHHHTT--------------------------------
T ss_pred             CCccchhhhHHHHHHHHHHHhcCCCCCccCC------HHHHHHHHHcC--------------------------------
Confidence            899999999999999999999 888886543      11111111000                                


Q ss_pred             CCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcC
Q 026540          157 FWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQH  202 (237)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h  202 (237)
                               .....+..++..+.+++.+||..||.+|||+++++++
T Consensus       266 ---------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~  302 (313)
T 3brb_A          266 ---------HRLKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQ  302 (313)
T ss_dssp             ---------CCCCCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred             ---------CCCCCCccccHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence                     0111233456789999999999999999999999864

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=99.95  E-value=3.9e-28  Score=198.48  Aligned_cols=164  Identities=16%  Similarity=0.191  Sum_probs=117.4

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhh--------cCCccCCCCCccccCCCCcEEEeecCcceecCcC-------cccCcCCC
Q 026540            3 IVEKKLKRRAKRAVANISIRRAS--------MGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ-------FAEEIQTR   67 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~--------~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~-------~~~~~~~~   67 (237)
                      +++.++..++.|++.||.|+|..        +++||||||+||+++.++.+||+|||++......       .....|++
T Consensus       131 ~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~  210 (337)
T 3mdy_A          131 LDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTK  210 (337)
T ss_dssp             BCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEECC---------CCSSCSCG
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEEEeCCCceeeccccccccCCCCCCccCc
Confidence            67889999999999999999999        9999999999999999999999999998654322       12457899


Q ss_pred             cccchHHhhhcCCCch------hhhhhhhhHHHHHhcCCc----------ccCCCCCCCCCChHHHHHHHHHHHCCCCHH
Q 026540           68 QYRAPEVILRAGYSFS------VDMWSFACTAFELATGDM----------LFAPKSGQGFCEDEDHLALMMELIGKMPRK  131 (237)
Q Consensus        68 ~~~~PE~~~~~~~~~~------~diws~g~~l~~~~~g~~----------~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~  131 (237)
                      .|+|||++.+......      +|+||+|++++++++|..          ||.......  ..............     
T Consensus       211 ~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~~~~--~~~~~~~~~~~~~~-----  283 (337)
T 3mdy_A          211 RYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSD--PSYEDMREIVCIKK-----  283 (337)
T ss_dssp             GGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSS--CCHHHHHHHHTTSC-----
T ss_pred             ceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhhcCCC--CchhhhHHHHhhhc-----
Confidence            9999999987765544      999999999999999944          443321100  00011100000000     


Q ss_pred             HHhcCCCchhhhcccCccchhccccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcC
Q 026540          132 IAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQH  202 (237)
Q Consensus       132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h  202 (237)
                                          ..  ...+       .......++..+.+|+.+||+.||.+|||++|++++
T Consensus       284 --------------------~~--~~~~-------~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~  325 (337)
T 3mdy_A          284 --------------------LR--PSFP-------NRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKT  325 (337)
T ss_dssp             --------------------CC--CCCC-------GGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred             --------------------cC--cccc-------ccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHH
Confidence                                00  0000       000123567889999999999999999999999875

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.95  E-value=3.2e-28  Score=202.43  Aligned_cols=152  Identities=18%  Similarity=0.218  Sum_probs=120.4

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcCcc-----cCcCCCcccchHHhhh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQFA-----EEIQTRQYRAPEVILR   77 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~~~-----~~~~~~~~~~PE~~~~   77 (237)
                      +++.++..++.|++.||.|+|+.+++||||||+|||++.++.+||+|||++........     ...++..|+|||.+.+
T Consensus       210 ~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  289 (377)
T 3cbl_A          210 LRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNY  289 (377)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCGGGCEECTTSEEECCSSCCEEEGGGSCHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCcCCcccCHHHEEEcCCCcEEECcCCCceecCCCceeecCCCCCCCcCcCCHhHhcc
Confidence            67889999999999999999999999999999999999999999999999875443211     1223567999999998


Q ss_pred             cCCCchhhhhhhhhHHHHHhc-CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcccc
Q 026540           78 AGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLK  156 (237)
Q Consensus        78 ~~~~~~~diws~g~~l~~~~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (237)
                      ..++.++|+||+|++++++++ |..||....      .......+ ...                               
T Consensus       290 ~~~~~~~DvwslG~il~el~t~g~~p~~~~~------~~~~~~~~-~~~-------------------------------  331 (377)
T 3cbl_A          290 GRYSSESDVWSFGILLWETFSLGASPYPNLS------NQQTREFV-EKG-------------------------------  331 (377)
T ss_dssp             CEEEHHHHHHHHHHHHHHHHTTSCCSSTTSC------HHHHHHHH-HTT-------------------------------
T ss_pred             CCCCchhhHHHHHHHHHHHHhCCCCCCCCCC------HHHHHHHH-HcC-------------------------------
Confidence            889999999999999999998 889987552      11111111 000                               


Q ss_pred             CCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhc
Q 026540          157 FWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ  201 (237)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  201 (237)
                               .....+..++..+.+|+.+||+.||.+|||++++++
T Consensus       332 ---------~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~  367 (377)
T 3cbl_A          332 ---------GRLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQ  367 (377)
T ss_dssp             ---------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ---------CCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence                     011223445778999999999999999999999975

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.95  E-value=3.5e-28  Score=194.76  Aligned_cols=154  Identities=15%  Similarity=0.125  Sum_probs=123.8

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC------cccCcCCCcccchHHhh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ------FAEEIQTRQYRAPEVIL   76 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~------~~~~~~~~~~~~PE~~~   76 (237)
                      +++.++..++.|++.||.|+|..+++|+||||+||+++.++.++|+|||++......      .....+++.|+|||.+.
T Consensus       107 ~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  186 (287)
T 1u59_A          107 IPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECIN  186 (287)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCEECCCCSSCCCGGGCCHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCEeeCCCchheEEEcCCCCEEECcccceeeeccCcceeeccccccccccccCHHHhc
Confidence            678999999999999999999999999999999999999999999999998765322      12334578899999998


Q ss_pred             hcCCCchhhhhhhhhHHHHHhc-CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccc
Q 026540           77 RAGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRL  155 (237)
Q Consensus        77 ~~~~~~~~diws~g~~l~~~~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (237)
                      +..++.++|+||+|++++++++ |..||....      .......+...                               
T Consensus       187 ~~~~~~~~Di~slG~il~ellt~g~~p~~~~~------~~~~~~~i~~~-------------------------------  229 (287)
T 1u59_A          187 FRKFSSRSDVWSYGVTMWEALSYGQKPYKKMK------GPEVMAFIEQG-------------------------------  229 (287)
T ss_dssp             HCEECHHHHHHHHHHHHHHHHTTSCCTTTTCC------THHHHHHHHTT-------------------------------
T ss_pred             cCCCCchhhHHHHHHHHHHHHcCCCCCcccCC------HHHHHHHHhcC-------------------------------
Confidence            8889999999999999999998 999997653      11111111000                               


Q ss_pred             cCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCC
Q 026540          156 KFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHP  203 (237)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp  203 (237)
                                .....+..++..+.++|.+||+.||.+|||+.+++++.
T Consensus       230 ----------~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l  267 (287)
T 1u59_A          230 ----------KRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRM  267 (287)
T ss_dssp             ----------CCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHH
T ss_pred             ----------CcCCCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHH
Confidence                      00122345578899999999999999999999999864

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=99.95  E-value=3.4e-28  Score=198.88  Aligned_cols=184  Identities=18%  Similarity=0.142  Sum_probs=122.4

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhh---------cCCccCCCCCccccCCCCcEEEeecCcceecCcC-----------ccc
Q 026540            3 IVEKKLKRRAKRAVANISIRRAS---------MGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ-----------FAE   62 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~---------~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~-----------~~~   62 (237)
                      .++..+..++.|++.||.|+|..         +++||||||+|||++.++.+||+|||++......           ...
T Consensus       108 ~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~  187 (336)
T 3g2f_A          108 SDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAIS  187 (336)
T ss_dssp             BCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEECCCTTCEECSSSSCC---------CC
T ss_pred             cchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEEeeccceeecccccccCcccccccccc
Confidence            35678899999999999999999         9999999999999999999999999999654321           223


Q ss_pred             CcCCCcccchHHhhh-------cCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCC-HHHHh
Q 026540           63 EIQTRQYRAPEVILR-------AGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMP-RKIAI  134 (237)
Q Consensus        63 ~~~~~~~~~PE~~~~-------~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~  134 (237)
                      ..|++.|+|||++.+       ..++.++|+||+|++++++++|..||...........     ......+..+ .....
T Consensus       188 ~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~  262 (336)
T 3g2f_A          188 EVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQM-----AFQTEVGNHPTFEDMQ  262 (336)
T ss_dssp             TTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCCCC-----TTHHHHCSSCCHHHHH
T ss_pred             CCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhHHHH-----hhhcccCCCchHHHHH
Confidence            468999999999986       3456789999999999999999877765431110000     0000000000 00000


Q ss_pred             cCCCchhhhcccCccchhccccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhc------CCCcCcc
Q 026540          135 GGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ------HPWLSLR  208 (237)
Q Consensus       135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~------hp~f~~~  208 (237)
                            .......            ...............+..+.+||.+||+.||++|||++|+++      ++|-+..
T Consensus       263 ------~~~~~~~------------~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~~~~~~  324 (336)
T 3g2f_A          263 ------VLVSREK------------QRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMIWERNK  324 (336)
T ss_dssp             ------HHHTTSC------------CCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHCCCC--
T ss_pred             ------hhhcccc------------cCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHHHHhcc
Confidence                  0000000            000001111223345778999999999999999999999965      5666644


Q ss_pred             c
Q 026540          209 N  209 (237)
Q Consensus       209 ~  209 (237)
                      .
T Consensus       325 ~  325 (336)
T 3g2f_A          325 S  325 (336)
T ss_dssp             -
T ss_pred             c
Confidence            3

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=99.95  E-value=1.4e-28  Score=196.43  Aligned_cols=154  Identities=17%  Similarity=0.120  Sum_probs=124.3

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCc--CcccCcCCCcccchHHhhhcCC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK--QFAEEIQTRQYRAPEVILRAGY   80 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~--~~~~~~~~~~~~~PE~~~~~~~   80 (237)
                      +++..+..++.|++.||.|+|..+++|+||||+||+++.++.++|+|||++.....  ......+++.|+|||.+.+..+
T Consensus       119 ~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  198 (284)
T 2a19_B          119 LDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDY  198 (284)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEESSCCSCCCCCCSCCTTSCHHHHHCSCC
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCeeeccCCHHHEEEcCCCCEEECcchhheeccccccccccCCcccccChhhhccCCC
Confidence            57888999999999999999999999999999999999999999999999876543  2334568899999999998889


Q ss_pred             CchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCch
Q 026540           81 SFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSL  160 (237)
Q Consensus        81 ~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (237)
                      +.++|+||+|++++++++|..|+...        .....   ...                                   
T Consensus       199 ~~~~Di~slG~il~~l~~~~~~~~~~--------~~~~~---~~~-----------------------------------  232 (284)
T 2a19_B          199 GKEVDLYALGLILAELLHVCDTAFET--------SKFFT---DLR-----------------------------------  232 (284)
T ss_dssp             CTHHHHHHHHHHHHHHHSCCSSHHHH--------HHHHH---HHH-----------------------------------
T ss_pred             cchhhhHHHHHHHHHHHhcCCcchhH--------HHHHH---Hhh-----------------------------------
Confidence            99999999999999999998776421        00000   000                                   


Q ss_pred             hHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcc
Q 026540          161 DRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLR  208 (237)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~  208 (237)
                            ....+...+..+.+++.+||+.||.+|||+.|++++.+.-..
T Consensus       233 ------~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~  274 (284)
T 2a19_B          233 ------DGIISDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKK  274 (284)
T ss_dssp             ------TTCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC
T ss_pred             ------cccccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhh
Confidence                  001123345678899999999999999999999999776543

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=99.95  E-value=1.6e-28  Score=215.31  Aligned_cols=184  Identities=22%  Similarity=0.227  Sum_probs=128.9

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCC---cEEEeecCcceecCc--CcccCcCCCcccchHHhh
Q 026540            2 TIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDM---RCKVVDFGNACRANK--QFAEEIQTRQYRAPEVIL   76 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~---~~kl~dfg~~~~~~~--~~~~~~~~~~~~~PE~~~   76 (237)
                      ++++..+..++.|++.||.|+|..+++|+||||+||+++.++   .++|+|||++.....  ......+++.|+|||.+.
T Consensus       117 ~lse~~i~~I~~QLl~aL~yLHs~gIVHrDLKP~NILl~~~g~~~~vKL~DFG~a~~~~~~~~~~~~~gt~~Y~APE~l~  196 (676)
T 3qa8_A          117 GLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPELLE  196 (676)
T ss_dssp             CCCSSHHHHHHHHHHHHHHHHHHTTBCCCCCCSTTEEEECCSSSCEEEECSCCCCCBTTSCCCCCCCCSCCTTCSSCSSC
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEeecCCCceeEEEcccccccccccccccccccCCcccCChHHhc
Confidence            367788999999999999999999999999999999998765   489999999876543  234457899999999998


Q ss_pred             hcCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcccc
Q 026540           77 RAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLK  156 (237)
Q Consensus        77 ~~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (237)
                      +..++.++|+||+|++++++++|..||.+..      ...      ..........    ............        
T Consensus       197 ~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~------~~~------~~~~~i~~~~----~~~~~~~~~l~g--------  252 (676)
T 3qa8_A          197 QKKYTVTVDYWSFGTLAFECITGFRPFLPNW------QPV------QWHGKVREKS----NEHIVVYDDLTG--------  252 (676)
T ss_dssp             CSCCSTTHHHHHHHHHHHHHHSSCSSCCSSC------HHH------HSSTTCC----------CCSCCCCSS--------
T ss_pred             cCCCCchhHHHHHHHHHHHHHHCCCCCCccc------chh------hhhhhhhccc----chhhhhhhhhcc--------
Confidence            8889999999999999999999999997542      000      0000000000    000000000000        


Q ss_pred             CCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCccc
Q 026540          157 FWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRN  209 (237)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~  209 (237)
                      ..................+..+.+||.+||.+||++|||++|+++||||....
T Consensus       253 ~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~l~  305 (676)
T 3qa8_A          253 AVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQALD  305 (676)
T ss_dssp             SCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHHHH
T ss_pred             ccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHHHH
Confidence            00001111112234556789999999999999999999999999999998664

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=99.95  E-value=2.3e-28  Score=199.38  Aligned_cols=154  Identities=15%  Similarity=0.147  Sum_probs=120.9

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCc--CcccCcCCCcccchHHhhhcC
Q 026540            2 TIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK--QFAEEIQTRQYRAPEVILRAG   79 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~--~~~~~~~~~~~~~PE~~~~~~   79 (237)
                      .+++.++..++.|++.||.|+|..+++||||||+||+++.++.++|+|||++.....  ......++..|+|||.+.+..
T Consensus       138 ~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  217 (327)
T 1fvr_A          138 TLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSV  217 (327)
T ss_dssp             SSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEECCTTCEESSCEECCC----CCTTTCCHHHHHHCE
T ss_pred             cCCHHHHHHHHHHHHHHHHHHHhCCccCCCCccceEEEcCCCeEEEcccCcCccccccccccCCCCCccccChhhhcccc
Confidence            367899999999999999999999999999999999999999999999999864332  222335577899999998888


Q ss_pred             CCchhhhhhhhhHHHHHhc-CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCC
Q 026540           80 YSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFW  158 (237)
Q Consensus        80 ~~~~~diws~g~~l~~~~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (237)
                      ++.++|+||+|++++++++ |..||.+..      .......+..   .                               
T Consensus       218 ~~~~~Di~slG~il~ellt~g~~pf~~~~------~~~~~~~~~~---~-------------------------------  257 (327)
T 1fvr_A          218 YTTNSDVWSYGVLLWEIVSLGGTPYCGMT------CAELYEKLPQ---G-------------------------------  257 (327)
T ss_dssp             ECHHHHHHHHHHHHHHHHTTSCCTTTTCC------HHHHHHHGGG---T-------------------------------
T ss_pred             CCchhcchHHHHHHHHHHcCCCCCCCCCc------HHHHHHHhhc---C-------------------------------
Confidence            9999999999999999998 999997653      1111111000   0                               


Q ss_pred             chhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcC
Q 026540          159 SLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQH  202 (237)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h  202 (237)
                             .....+..++..+.+|+.+||..||.+|||+++++++
T Consensus       258 -------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~  294 (327)
T 1fvr_A          258 -------YRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS  294 (327)
T ss_dssp             -------CCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             -------CCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence                   0011233456789999999999999999999999985

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=99.95  E-value=8.6e-28  Score=193.19  Aligned_cols=166  Identities=17%  Similarity=0.149  Sum_probs=120.0

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC------cccCcCCCcccchHHhh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ------FAEEIQTRQYRAPEVIL   76 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~------~~~~~~~~~~~~PE~~~   76 (237)
                      +++.++..++.|++.||.|+|+.+++||||||+||+++.++.+||+|||++......      .....++..|+|||.+.
T Consensus       111 ~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  190 (295)
T 3ugc_A          111 IDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLT  190 (295)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCCSCC-------------CTTCGGGGCCHHHHH
T ss_pred             cCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHhhEEEcCCCeEEEccCcccccccCCcceeeeccCCCCccceeCcHHhc
Confidence            678899999999999999999999999999999999999999999999998654321      22334567799999999


Q ss_pred             hcCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcccc
Q 026540           77 RAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLK  156 (237)
Q Consensus        77 ~~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (237)
                      +..++.++|+||+|++++++++|..||....        ..   ..+..+..+...        ...             
T Consensus       191 ~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~--------~~---~~~~~~~~~~~~--------~~~-------------  238 (295)
T 3ugc_A          191 ESKFSVASDVWSFGVVLYELFTYIEKSKSPP--------AE---FMRMIGNDKQGQ--------MIV-------------  238 (295)
T ss_dssp             HCCCCHHHHHHHHHHHHHHHHHTTCTTCSHH--------HH---HHHHHCTTCCTH--------HHH-------------
T ss_pred             CCCCChHHHHHHHHHHHHHHHhcccccCCCh--------HH---HHhhhcCccccc--------hhH-------------
Confidence            9999999999999999999999988875321        00   111111100000        000             


Q ss_pred             CCchhHHh--hhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhc
Q 026540          157 FWSLDRLL--VDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ  201 (237)
Q Consensus       157 ~~~~~~~~--~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  201 (237)
                       .......  ......+..++..+.+++.+||+.||.+|||++|+++
T Consensus       239 -~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~  284 (295)
T 3ugc_A          239 -FHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLAL  284 (295)
T ss_dssp             -HHHHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             -HHHHHHHhccCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence             0000000  0112335566789999999999999999999999985

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=99.95  E-value=9.5e-28  Score=192.95  Aligned_cols=153  Identities=16%  Similarity=0.130  Sum_probs=118.8

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCc-------CcccCcCCCcccchHHh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK-------QFAEEIQTRQYRAPEVI   75 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~-------~~~~~~~~~~~~~PE~~   75 (237)
                      +++.++..++.|++.||.|+|..+++|+||||+||+++.++.++|+|||++.....       ......++..|++||.+
T Consensus       121 ~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~  200 (298)
T 3pls_A          121 PTVKDLISFGLQVARGMEYLAEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESL  200 (298)
T ss_dssp             CBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGGGGCSCCSSCTTCGGGGSCHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCcEEeCcCCCcccccCCcccccccCcCCCCCccccChhhh
Confidence            57888999999999999999999999999999999999999999999999864321       22234567889999999


Q ss_pred             hhcCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccc
Q 026540           76 LRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRL  155 (237)
Q Consensus        76 ~~~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (237)
                      .+..++.++|+||+|++++++++|..|+....     ........+...                               
T Consensus       201 ~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~-----~~~~~~~~~~~~-------------------------------  244 (298)
T 3pls_A          201 QTYRFTTKSDVWSFGVLLWELLTRGAPPYRHI-----DPFDLTHFLAQG-------------------------------  244 (298)
T ss_dssp             TTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTS-----CGGGHHHHHHTT-------------------------------
T ss_pred             ccCCCChhhchhhHHHHHHHHhhCCCCCCccC-----CHHHHHHHhhcC-------------------------------
Confidence            98899999999999999999999665544332     111111111000                               


Q ss_pred             cCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhc
Q 026540          156 KFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ  201 (237)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  201 (237)
                                .....+...+..+.+++.+||+.||.+|||++++++
T Consensus       245 ----------~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~  280 (298)
T 3pls_A          245 ----------RRLPQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVG  280 (298)
T ss_dssp             ----------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ----------CCCCCCccchHHHHHHHHHHccCChhhCcCHHHHHH
Confidence                      011123345678999999999999999999999886

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.95  E-value=6.4e-28  Score=205.13  Aligned_cols=159  Identities=18%  Similarity=0.234  Sum_probs=122.5

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC----cccCcCCCcccchHHhhhc
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ----FAEEIQTRQYRAPEVILRA   78 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~----~~~~~~~~~~~~PE~~~~~   78 (237)
                      +++.++..++.|++.||+|+|..+++||||||+|||++.++.+||+|||++......    .....++..|+|||.+...
T Consensus       277 ~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  356 (452)
T 1fmk_A          277 LRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYG  356 (452)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCCTTC--------------CCGGGSCHHHHHHC
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEECCCCCEEECCCccceecCCCceecccCCcccccccCHhHHhcC
Confidence            678899999999999999999999999999999999999999999999998654321    1223456789999999999


Q ss_pred             CCCchhhhhhhhhHHHHHhc-CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccC
Q 026540           79 GYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKF  157 (237)
Q Consensus        79 ~~~~~~diws~g~~l~~~~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (237)
                      .++.++|+||+|++++++++ |..||.+..      .......+.+.                                 
T Consensus       357 ~~~~~sDvwslG~~l~el~t~g~~P~~~~~------~~~~~~~i~~~---------------------------------  397 (452)
T 1fmk_A          357 RFTIKSDVWSFGILLTELTTKGRVPYPGMV------NREVLDQVERG---------------------------------  397 (452)
T ss_dssp             CCCHHHHHHHHHHHHHHHHTTTCCSSTTCC------HHHHHHHHHTT---------------------------------
T ss_pred             CCCccccHHhHHHHHHHHHhCCCCCCCCCC------HHHHHHHHHcC---------------------------------
Confidence            99999999999999999999 899997653      22222111000                                 


Q ss_pred             CchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcC--CCcCcc
Q 026540          158 WSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQH--PWLSLR  208 (237)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h--p~f~~~  208 (237)
                              .....+..++..+.+++.+||+.||.+|||++++++.  .++...
T Consensus       398 --------~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~~  442 (452)
T 1fmk_A          398 --------YRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTST  442 (452)
T ss_dssp             --------CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCS
T ss_pred             --------CCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhccC
Confidence                    0112234567789999999999999999999999873  566543

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=99.95  E-value=8.6e-28  Score=196.60  Aligned_cols=153  Identities=19%  Similarity=0.219  Sum_probs=122.4

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC-----cccCcCCCcccchHHhhh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ-----FAEEIQTRQYRAPEVILR   77 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~-----~~~~~~~~~~~~PE~~~~   77 (237)
                      +++.++..++.|++.||.|+|..+++|+||||+||+++.++.+||+|||++......     .....+++.|+|||++.+
T Consensus       154 ~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  233 (334)
T 2pvf_A          154 MTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFD  233 (334)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCeeCCCCccceEEEcCCCCEEEccccccccccccccccccCCCCcccceeChHHhcC
Confidence            678899999999999999999999999999999999999999999999998755432     223355678999999998


Q ss_pred             cCCCchhhhhhhhhHHHHHhc-CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcccc
Q 026540           78 AGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLK  156 (237)
Q Consensus        78 ~~~~~~~diws~g~~l~~~~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (237)
                      ..++.++|+||+|++++++++ |..||.+..      .......+...                                
T Consensus       234 ~~~~~~~Di~slG~il~ellt~g~~p~~~~~------~~~~~~~~~~~--------------------------------  275 (334)
T 2pvf_A          234 RVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP------VEELFKLLKEG--------------------------------  275 (334)
T ss_dssp             CEECHHHHHHHHHHHHHHHHTTSCCSSTTCC------HHHHHHHHHHT--------------------------------
T ss_pred             CCcChHHHHHHHHHHHHHHHhCCCCCcCcCC------HHHHHHHHhcC--------------------------------
Confidence            889999999999999999999 989987542      21111111100                                


Q ss_pred             CCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcC
Q 026540          157 FWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQH  202 (237)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h  202 (237)
                               .....+..++..+.+++.+||..||.+|||++|++++
T Consensus       276 ---------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~  312 (334)
T 2pvf_A          276 ---------HRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVED  312 (334)
T ss_dssp             ---------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ---------CCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence                     0011233456788999999999999999999999875

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.95  E-value=9.5e-28  Score=190.05  Aligned_cols=153  Identities=17%  Similarity=0.221  Sum_probs=121.1

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCc----CcccCcCCCcccchHHhhhc
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK----QFAEEIQTRQYRAPEVILRA   78 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~----~~~~~~~~~~~~~PE~~~~~   78 (237)
                      +++..+..++.|++.||.|+|..+++|+||||+||+++.++.++|+|||++.....    ......++..|+|||++.+.
T Consensus       101 ~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  180 (267)
T 3t9t_A          101 FAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFS  180 (267)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTTSTTCCGGGCCHHHHHHC
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEECCCCCEEEcccccccccccccccccccccccccccChhhhcCC
Confidence            57888999999999999999999999999999999999999999999999865432    12234556789999999988


Q ss_pred             CCCchhhhhhhhhHHHHHhc-CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccC
Q 026540           79 GYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKF  157 (237)
Q Consensus        79 ~~~~~~diws~g~~l~~~~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (237)
                      .++.++|+||+|++++++++ |..||....      .......+....                                
T Consensus       181 ~~~~~~Di~slG~il~~l~~~g~~p~~~~~------~~~~~~~i~~~~--------------------------------  222 (267)
T 3t9t_A          181 RYSSKSDVWSFGVLMWEVFSEGKIPYENRS------NSEVVEDISTGF--------------------------------  222 (267)
T ss_dssp             CCCHHHHHHHHHHHHHHHHTTSCCTTTTCC------HHHHHHHHHTTC--------------------------------
T ss_pred             CccchhchhhhHHHHHHHhccCCCCCCCCC------HHHHHHHHhcCC--------------------------------
Confidence            99999999999999999999 889987542      222211110000                                


Q ss_pred             CchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcC
Q 026540          158 WSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQH  202 (237)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h  202 (237)
                               ....+...+..+.+++.+||+.||.+|||+++++++
T Consensus       223 ---------~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~  258 (267)
T 3t9t_A          223 ---------RLYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQ  258 (267)
T ss_dssp             ---------CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ---------cCCCCccCcHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence                     011123346778999999999999999999999863

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=99.95  E-value=5.3e-28  Score=197.58  Aligned_cols=153  Identities=15%  Similarity=0.157  Sum_probs=120.3

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC-----cccCcCCCcccchHHhhh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ-----FAEEIQTRQYRAPEVILR   77 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~-----~~~~~~~~~~~~PE~~~~   77 (237)
                      +++.++..++.|++.||.|+|..+++|+||||+||+++.++.++|+|||++......     .....+++.|+|||.+.+
T Consensus       161 ~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  240 (333)
T 2i1m_A          161 ASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFD  240 (333)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGCEEEGGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHH
T ss_pred             cCHHHHHHHHHHHHHHHHHHhcCCcccCCcccceEEECCCCeEEECccccccccccccceeecCCCCCCccccCHHHhcc
Confidence            578889999999999999999999999999999999999999999999998654322     122345678999999999


Q ss_pred             cCCCchhhhhhhhhHHHHHhc-CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcccc
Q 026540           78 AGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLK  156 (237)
Q Consensus        78 ~~~~~~~diws~g~~l~~~~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (237)
                      ..++.++|+||+|++++++++ |..||.+..     .. ..........                               
T Consensus       241 ~~~~~~~Di~slG~il~el~t~g~~p~~~~~-----~~-~~~~~~~~~~-------------------------------  283 (333)
T 2i1m_A          241 CVYTVQSDVWSYGILLWEIFSLGLNPYPGIL-----VN-SKFYKLVKDG-------------------------------  283 (333)
T ss_dssp             CCCCHHHHHHHHHHHHHHHTTTSCCSSTTCC-----SS-HHHHHHHHHT-------------------------------
T ss_pred             CCCChHHHHHHHHHHHHHHHcCCCCCCcccc-----hh-HHHHHHHhcC-------------------------------
Confidence            999999999999999999998 888987653     11 1111111100                               


Q ss_pred             CCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhc
Q 026540          157 FWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ  201 (237)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  201 (237)
                               .....+...+..+.+++.+||+.||.+|||+.|+++
T Consensus       284 ---------~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~  319 (333)
T 2i1m_A          284 ---------YQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICS  319 (333)
T ss_dssp             ---------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ---------CCCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHHH
Confidence                     001123334678899999999999999999999986

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=99.95  E-value=5.6e-28  Score=200.64  Aligned_cols=153  Identities=17%  Similarity=0.190  Sum_probs=112.9

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC-------cccCcCCCcccchHHh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ-------FAEEIQTRQYRAPEVI   75 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~-------~~~~~~~~~~~~PE~~   75 (237)
                      +++.++..++.|++.||.|+|..+++||||||+||+++.++.+||+|||++......       .....++..|+|||.+
T Consensus       189 ~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~  268 (373)
T 3c1x_A          189 PTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL  268 (373)
T ss_dssp             CBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC---------------------CCGGGSCHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCEecCccchheEEECCCCCEEEeeccccccccccccccccccCCCCCcccccChHHh
Confidence            567889999999999999999999999999999999999999999999998644221       1223456789999999


Q ss_pred             hhcCCCchhhhhhhhhHHHHHhc-CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcc
Q 026540           76 LRAGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRR  154 (237)
Q Consensus        76 ~~~~~~~~~diws~g~~l~~~~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (237)
                      .+..++.++|+||+|++++++++ |..||......      +....+..  +                            
T Consensus       269 ~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~------~~~~~~~~--~----------------------------  312 (373)
T 3c1x_A          269 QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF------DITVYLLQ--G----------------------------  312 (373)
T ss_dssp             HHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSS------CHHHHHHT--T----------------------------
T ss_pred             cCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHH------HHHHHHHc--C----------------------------
Confidence            99999999999999999999999 56677554311      01100000  0                            


Q ss_pred             ccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcC
Q 026540          155 LKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQH  202 (237)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h  202 (237)
                                 .....+..++..+.+++.+||+.||.+|||+++++++
T Consensus       313 -----------~~~~~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~  349 (373)
T 3c1x_A          313 -----------RRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSR  349 (373)
T ss_dssp             -----------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             -----------CCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence                       0011233456789999999999999999999999874

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.95  E-value=6.9e-28  Score=212.45  Aligned_cols=152  Identities=16%  Similarity=0.163  Sum_probs=120.5

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC------cccCcCCCcccchHHhh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ------FAEEIQTRQYRAPEVIL   76 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~------~~~~~~~~~~~~PE~~~   76 (237)
                      +++.++..++.|++.||.|+|..+++||||||+|||++.++.+||+|||++......      .....++..|+|||++.
T Consensus       466 l~~~~~~~i~~qi~~~L~yLH~~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~t~~y~APE~~~  545 (635)
T 4fl3_A          466 VKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECIN  545 (635)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC-------------CGGGSCHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCEeCCCCChHhEEEeCCCCEEEEEcCCccccccCccccccccCCCCceeeeChhhhc
Confidence            678899999999999999999999999999999999999999999999998654321      22234567899999999


Q ss_pred             hcCCCchhhhhhhhhHHHHHhc-CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccc
Q 026540           77 RAGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRL  155 (237)
Q Consensus        77 ~~~~~~~~diws~g~~l~~~~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (237)
                      +..++.++|+||+|++++++++ |..||.+..      .......+...                               
T Consensus       546 ~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~------~~~~~~~i~~~-------------------------------  588 (635)
T 4fl3_A          546 YYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK------GSEVTAMLEKG-------------------------------  588 (635)
T ss_dssp             HCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCC------HHHHHHHHHTT-------------------------------
T ss_pred             CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCC------HHHHHHHHHcC-------------------------------
Confidence            9999999999999999999998 999997653      22222111100                               


Q ss_pred             cCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhc
Q 026540          156 KFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ  201 (237)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  201 (237)
                                .....+..++.++.+||..||+.||++|||++++++
T Consensus       589 ----------~~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~  624 (635)
T 4fl3_A          589 ----------ERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVEL  624 (635)
T ss_dssp             ----------CCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             ----------CCCCCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHH
Confidence                      011234456788999999999999999999999875

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=99.95  E-value=1.2e-27  Score=190.81  Aligned_cols=152  Identities=18%  Similarity=0.215  Sum_probs=121.3

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC----cccCcCCCcccchHHhhhc
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ----FAEEIQTRQYRAPEVILRA   78 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~----~~~~~~~~~~~~PE~~~~~   78 (237)
                      +++.++..++.|++.||.|+|..+++|+||||+||+++.++.++|+|||++......    .....++..|+|||.+.+.
T Consensus       106 ~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  185 (279)
T 1qpc_A          106 LTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYG  185 (279)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEECCTTCCCCTTTSCHHHHHHC
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHhhEEEcCCCCEEECCCcccccccCcccccccCCCCccCccChhhhccC
Confidence            678899999999999999999999999999999999999999999999998765432    1223456789999999988


Q ss_pred             CCCchhhhhhhhhHHHHHhc-CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccC
Q 026540           79 GYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKF  157 (237)
Q Consensus        79 ~~~~~~diws~g~~l~~~~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (237)
                      .++.++|+||+|++++++++ |..||.+..      .......+.+.                                 
T Consensus       186 ~~~~~~Di~slG~il~el~~~g~~p~~~~~------~~~~~~~~~~~---------------------------------  226 (279)
T 1qpc_A          186 TFTIKSDVWSFGILLTEIVTHGRIPYPGMT------NPEVIQNLERG---------------------------------  226 (279)
T ss_dssp             EECHHHHHHHHHHHHHHHHTTTCCSSTTCC------HHHHHHHHHTT---------------------------------
T ss_pred             CCCchhhhHHHHHHHHHHHhCCCCCCcccC------HHHHHHHHhcc---------------------------------
Confidence            89999999999999999999 888987542      22211111000                                 


Q ss_pred             CchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhc
Q 026540          158 WSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ  201 (237)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  201 (237)
                              .....+...+..+.+++.+||..||++|||++++++
T Consensus       227 --------~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~  262 (279)
T 1qpc_A          227 --------YRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRS  262 (279)
T ss_dssp             --------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             --------cCCCCcccccHHHHHHHHHHhccChhhCCCHHHHHH
Confidence                    001123345678999999999999999999999886

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=99.95  E-value=1.3e-28  Score=200.90  Aligned_cols=166  Identities=19%  Similarity=0.160  Sum_probs=122.9

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC------cccCcCCCcccchHHhh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ------FAEEIQTRQYRAPEVIL   76 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~------~~~~~~~~~~~~PE~~~   76 (237)
                      +++.++..++.|++.||.|+|..+++|+||||+||+++.++.++|+|||++......      .....++..|+|||.+.
T Consensus       124 ~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  203 (327)
T 3lxl_A          124 LDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLS  203 (327)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCGGGCEECCTTCSEEECSSCCCSCGGGSCHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCccCCCCChhhEEECCCCCEEEcccccceecccCCccceeeccCCccccccCHHHhc
Confidence            678899999999999999999999999999999999999999999999998754322      22345677899999999


Q ss_pred             hcCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcccc
Q 026540           77 RAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLK  156 (237)
Q Consensus        77 ~~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (237)
                      +..++.++|+||+|++++++++|..||....       ..... ........+..                  ..     
T Consensus       204 ~~~~~~~~Di~slG~il~~ll~g~~p~~~~~-------~~~~~-~~~~~~~~~~~------------------~~-----  252 (327)
T 3lxl_A          204 DNIFSRQSDVWSFGVVLYELFTYCDKSCSPS-------AEFLR-MMGCERDVPAL------------------SR-----  252 (327)
T ss_dssp             HCEEEHHHHHHHHHHHHHHHHTTTCGGGSHH-------HHHHH-HCC----CCHH------------------HH-----
T ss_pred             cCCCChHHhHHHHHHHHHHHHhCCCCCcccc-------chhhh-hcccccccccH------------------HH-----
Confidence            8889999999999999999999999986431       00000 00000000000                  00     


Q ss_pred             CCchhHHhh--hhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcC
Q 026540          157 FWSLDRLLV--DKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQH  202 (237)
Q Consensus       157 ~~~~~~~~~--~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h  202 (237)
                         ......  .....+..+++.+.+|+.+||+.||.+|||++|++++
T Consensus       253 ---~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~  297 (327)
T 3lxl_A          253 ---LLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQ  297 (327)
T ss_dssp             ---HHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ---HHHHhhcccCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence               000000  0122345567889999999999999999999999664

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=99.95  E-value=2.6e-28  Score=199.28  Aligned_cols=151  Identities=17%  Similarity=0.186  Sum_probs=104.5

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhc--CCccCCCCCccccCCCCcEEEeecCcceecCcCc---------------ccCcC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASM--GGIELPKPERCLDGIDMRCKVVDFGNACRANKQF---------------AEEIQ   65 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~--~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~~---------------~~~~~   65 (237)
                      +++.++..++.|++.||.|+|..+  ++||||||+|||++.++.+||+|||++.......               ....+
T Consensus       133 ~~~~~~~~i~~qi~~~l~~LH~~~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  212 (337)
T 3ll6_A          133 LSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNT  212 (337)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHTSSSCCBCCCCCGGGCEECTTSCEEBCCCTTCBCCSSCC--------------------
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCCCEEEccCCcccEEECCCCCEEEecCccceeccccCcccccccccccchhhccccC
Confidence            678899999999999999999999  9999999999999999999999999986543211               13457


Q ss_pred             CCcccchHHh---hhcCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhh
Q 026540           66 TRQYRAPEVI---LRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDY  142 (237)
Q Consensus        66 ~~~~~~PE~~---~~~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  142 (237)
                      ++.|+|||++   .+..++.++|+||+|++++++++|..||......         .......                 
T Consensus       213 t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~---------~~~~~~~-----------------  266 (337)
T 3ll6_A          213 TPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKL---------RIVNGKY-----------------  266 (337)
T ss_dssp             -----------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC---------------------C-----------------
T ss_pred             CCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHH---------HhhcCcc-----------------
Confidence            8899999998   4556889999999999999999999999643200         0000000                 


Q ss_pred             hcccCccchhccccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCC
Q 026540          143 FDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHP  203 (237)
Q Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp  203 (237)
                                              ........+..+.+|+.+||+.||.+|||++|++++-
T Consensus       267 ------------------------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l  303 (337)
T 3ll6_A          267 ------------------------SIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQL  303 (337)
T ss_dssp             ------------------------CCCTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHH
T ss_pred             ------------------------cCCcccccchHHHHHHHHHccCChhhCcCHHHHHHHH
Confidence                                    0001112234577999999999999999999999874

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=99.94  E-value=1.5e-28  Score=196.93  Aligned_cols=151  Identities=17%  Similarity=0.185  Sum_probs=116.3

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCc--------EEEeecCcceecCcCcccCcCCCcccchHH
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMR--------CKVVDFGNACRANKQFAEEIQTRQYRAPEV   74 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~--------~kl~dfg~~~~~~~~~~~~~~~~~~~~PE~   74 (237)
                      +++..+..++.|++.||.|+|..+++||||||+||+++.++.        ++|+|||++...... ....++..|+|||.
T Consensus       110 ~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~Dfg~~~~~~~~-~~~~~~~~y~aPE~  188 (289)
T 4fvq_A          110 INILWKLEVAKQLAAAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPK-DILQERIPWVPPEC  188 (289)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEEECCBGGGTBCCEEEECCCCSCTTTSCH-HHHHHTTTTSCHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHhhCCeECCCcCcceEEEecCCcccccccceeeeccCcccccccCc-cccCCcCcccCHHH
Confidence            678889999999999999999999999999999999988776        999999988544322 23356788999999


Q ss_pred             hhh-cCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhc
Q 026540           75 ILR-AGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIR  153 (237)
Q Consensus        75 ~~~-~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (237)
                      +.+ ..++.++|+||+|++++++++|..++....     ... ......                               
T Consensus       189 ~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~-----~~~-~~~~~~-------------------------------  231 (289)
T 4fvq_A          189 IENPKNLNLATDKWSFGTTLWEICSGGDKPLSAL-----DSQ-RKLQFY-------------------------------  231 (289)
T ss_dssp             HHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTS-----CHH-HHHHHH-------------------------------
T ss_pred             hCCCCCCCchhHHHHHHHHHHHHHcCCCCCcccc-----chH-HHHHHh-------------------------------
Confidence            987 568999999999999999999654443321     111 111110                               


Q ss_pred             cccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcC
Q 026540          154 RLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQH  202 (237)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h  202 (237)
                                 ......+...+..+.+|+.+||+.||.+|||+++++++
T Consensus       232 -----------~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~  269 (289)
T 4fvq_A          232 -----------EDRHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRD  269 (289)
T ss_dssp             -----------HTTCCCCCCSSCTTHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred             -----------hccCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence                       01111222335567899999999999999999999986

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=99.94  E-value=4.5e-28  Score=195.38  Aligned_cols=149  Identities=23%  Similarity=0.310  Sum_probs=112.7

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCC---CCcEEEeecCcceecCcCcccCcCCCcccchHHhhhcC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGI---DMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAG   79 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~---~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~PE~~~~~~   79 (237)
                      +++.++..++.|++.||.|+|..+++||||||+||+++.   ++.++|+|||++.....                   ..
T Consensus       114 ~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~-------------------~~  174 (299)
T 3m2w_A          114 FTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTG-------------------EK  174 (299)
T ss_dssp             CBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECTT-------------------CG
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEecCCCCCcEEEecccccccccc-------------------cc
Confidence            788999999999999999999999999999999999998   78899999998854321                   23


Q ss_pred             CCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCc
Q 026540           80 YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWS  159 (237)
Q Consensus        80 ~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (237)
                      ++.++|+||+|++++++++|..||........             ...        ...            .        
T Consensus       175 ~~~~~DiwslG~il~el~tg~~pf~~~~~~~~-------------~~~--------~~~------------~--------  213 (299)
T 3m2w_A          175 YDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI-------------SPG--------MKT------------R--------  213 (299)
T ss_dssp             GGGHHHHHHHHHHHHHHHHSSCSCCC--------------------CC--------SCC------------S--------
T ss_pred             CCchhhHHHHHHHHHHHHHCCCCCCCCcchhh-------------hHH--------HHH------------H--------
Confidence            56789999999999999999999975431100             000        000            0        


Q ss_pred             hhHHhhhhcCCC----HHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccCCccc
Q 026540          160 LDRLLVDKYRFS----ETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNSTRDE  214 (237)
Q Consensus       160 ~~~~~~~~~~~~----~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~~~~~  214 (237)
                         ........+    ...+.++.+|+.+||+.||.+|||++|+++||||.........
T Consensus       214 ---~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~hp~~~~~~~~~~~  269 (299)
T 3m2w_A          214 ---IRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQT  269 (299)
T ss_dssp             ---SCTTCCSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHTGGGSCCC
T ss_pred             ---HhhccccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhcChhhcccccCCCC
Confidence               000000011    2346789999999999999999999999999999977654443

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=99.94  E-value=8.5e-28  Score=192.42  Aligned_cols=152  Identities=19%  Similarity=0.216  Sum_probs=120.9

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcCc----ccCcCCCcccchHHhhhc
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQF----AEEIQTRQYRAPEVILRA   78 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~~----~~~~~~~~~~~PE~~~~~   78 (237)
                      +++..+..++.|++.+|.|+|..+++|+||||+||+++.++.++|+|||++.......    ....+++.|+|||.+.+.
T Consensus       108 ~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  187 (288)
T 3kfa_A          108 VSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYN  187 (288)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHHTCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSSSEEETTEEECGGGCCHHHHHHC
T ss_pred             ccHhHHHHHHHHHHHHHHHHHHCCccCCCCCcceEEEcCCCCEEEccCccceeccCCccccccCCccccCcCChhhhccC
Confidence            6788999999999999999999999999999999999999999999999986544221    223446789999999999


Q ss_pred             CCCchhhhhhhhhHHHHHhc-CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccC
Q 026540           79 GYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKF  157 (237)
Q Consensus        79 ~~~~~~diws~g~~l~~~~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (237)
                      .++.++|+||+|++++++++ |..||....      .......+...                                 
T Consensus       188 ~~~~~~Di~slG~il~~ll~~g~~p~~~~~------~~~~~~~~~~~---------------------------------  228 (288)
T 3kfa_A          188 KFSIKSDVWAFGVLLWEIATYGMSPYPGID------LSQVYELLEKD---------------------------------  228 (288)
T ss_dssp             CCCHHHHHHHHHHHHHHHHTTSCCSSTTCC------GGGHHHHHHTT---------------------------------
T ss_pred             CCCchhhHHHHHHHHHHHHhCCCCCCCCCC------HHHHHHHHhcc---------------------------------
Confidence            99999999999999999999 888886543      11111111000                                 


Q ss_pred             CchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhc
Q 026540          158 WSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ  201 (237)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  201 (237)
                              .....+..++..+.+|+.+||..||.+|||++++++
T Consensus       229 --------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~  264 (288)
T 3kfa_A          229 --------YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ  264 (288)
T ss_dssp             --------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             --------CCCCCCCCCCHHHHHHHHHHhCCChhhCcCHHHHHH
Confidence                    011123445678999999999999999999999986

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=99.94  E-value=2.7e-28  Score=196.61  Aligned_cols=165  Identities=18%  Similarity=0.230  Sum_probs=123.4

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC------cccCcCCCcccchHHhh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ------FAEEIQTRQYRAPEVIL   76 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~------~~~~~~~~~~~~PE~~~   76 (237)
                      +++.++..++.|++.||+|+|..+++|+||||+||+++.++.++|+|||++......      .....++..|+|||.+.
T Consensus       123 ~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  202 (302)
T 4e5w_A          123 INLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDRDSPVFWYAPECLM  202 (302)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCCEEECCCCTTCCGGGCCHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCcccCCCchheEEEcCCCCEEECcccccccccCCCcceeccCCCCCCccccCCeeec
Confidence            678899999999999999999999999999999999999999999999998765422      22345677899999999


Q ss_pred             hcCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcccc
Q 026540           77 RAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLK  156 (237)
Q Consensus        77 ~~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (237)
                      +..++.++|+||+|++++++++|..|+...           ........+........               .      
T Consensus       203 ~~~~~~~~Di~slG~il~~l~~g~~p~~~~-----------~~~~~~~~~~~~~~~~~---------------~------  250 (302)
T 4e5w_A          203 QSKFYIASDVWSFGVTLHELLTYCDSDSSP-----------MALFLKMIGPTHGQMTV---------------T------  250 (302)
T ss_dssp             HCEEEHHHHHHHHHHHHHHHHTTTCGGGSH-----------HHHHHHHHCSCCGGGHH---------------H------
T ss_pred             CCCCCcchhHHHHHHHHHHHHHccCCCcch-----------hhHHhhccCCcccccCH---------------H------
Confidence            988999999999999999999998876432           11111222211111000               0      


Q ss_pred             CCchhHHhh--hhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhc
Q 026540          157 FWSLDRLLV--DKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ  201 (237)
Q Consensus       157 ~~~~~~~~~--~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  201 (237)
                        .......  .....+..++..+.+|+.+||+.||.+|||++++++
T Consensus       251 --~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  295 (302)
T 4e5w_A          251 --RLVNTLKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIE  295 (302)
T ss_dssp             --HHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHH
T ss_pred             --HHHHHHhccCCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHH
Confidence              0000000  112234556788999999999999999999999985

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=99.94  E-value=9.7e-28  Score=192.58  Aligned_cols=152  Identities=16%  Similarity=0.187  Sum_probs=120.5

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC------cccCcCCCcccchHHhh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ------FAEEIQTRQYRAPEVIL   76 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~------~~~~~~~~~~~~PE~~~   76 (237)
                      +++.++..++.|++.||.|+|..+++|+||||+||+++.++.++|+|||++......      .....++..|+|||.+.
T Consensus       114 ~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  193 (291)
T 1xbb_A          114 VKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECIN  193 (291)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEEEC----CCCGGGCCHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCeEcCCCCcceEEEeCCCcEEEccCCcceeeccCCCcccccccCCCCceeeChHHhc
Confidence            678899999999999999999999999999999999999999999999998755422      12234567899999999


Q ss_pred             hcCCCchhhhhhhhhHHHHHhc-CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccc
Q 026540           77 RAGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRL  155 (237)
Q Consensus        77 ~~~~~~~~diws~g~~l~~~~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (237)
                      +..++.++|+||+|++++++++ |..||....      .......+..  +                             
T Consensus       194 ~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~------~~~~~~~~~~--~-----------------------------  236 (291)
T 1xbb_A          194 YYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK------GSEVTAMLEK--G-----------------------------  236 (291)
T ss_dssp             HCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCC------HHHHHHHHHT--T-----------------------------
T ss_pred             cCCCChhhhHHHHHHHHHHHHhcCCCCCCCCC------HHHHHHHHHc--C-----------------------------
Confidence            8888999999999999999999 999997653      2111111100  0                             


Q ss_pred             cCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhc
Q 026540          156 KFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ  201 (237)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  201 (237)
                                .....+..++..+.+++.+||+.||.+|||+.++++
T Consensus       237 ----------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~  272 (291)
T 1xbb_A          237 ----------ERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVEL  272 (291)
T ss_dssp             ----------CCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             ----------CCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence                      011123445778999999999999999999999886

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.94  E-value=1.5e-27  Score=209.76  Aligned_cols=152  Identities=15%  Similarity=0.133  Sum_probs=119.9

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC------cccCcCCCcccchHHhh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ------FAEEIQTRQYRAPEVIL   76 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~------~~~~~~~~~~~~PE~~~   76 (237)
                      +++.++..++.|++.||.|+|..+++||||||+|||++.++.+||+|||++......      .....+++.|+|||++.
T Consensus       433 l~~~~~~~i~~qi~~~L~~LH~~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~y~APE~~~  512 (613)
T 2ozo_A          433 IPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECIN  512 (613)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCSTTTTCC--------------CCTTSCHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceeeeccCCCCccceeCHhhhc
Confidence            678899999999999999999999999999999999999999999999998654321      11223457899999999


Q ss_pred             hcCCCchhhhhhhhhHHHHHhc-CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccc
Q 026540           77 RAGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRL  155 (237)
Q Consensus        77 ~~~~~~~~diws~g~~l~~~~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (237)
                      +..++.++|+||+|++++++++ |..||.+..      ..+....+...                               
T Consensus       513 ~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~------~~~~~~~i~~~-------------------------------  555 (613)
T 2ozo_A          513 FRKFSSRSDVWSYGVTMWEALSYGQKPYKKMK------GPEVMAFIEQG-------------------------------  555 (613)
T ss_dssp             HCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC------SHHHHHHHHTT-------------------------------
T ss_pred             CCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCC------HHHHHHHHHcC-------------------------------
Confidence            9999999999999999999998 999997653      22221111000                               


Q ss_pred             cCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhc
Q 026540          156 KFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ  201 (237)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  201 (237)
                                .....+..++..+.++|.+||+.||.+||+++++++
T Consensus       556 ----------~~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~  591 (613)
T 2ozo_A          556 ----------KRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQ  591 (613)
T ss_dssp             ----------CCCCCCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHH
T ss_pred             ----------CCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence                      011234456788999999999999999999999864

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.94  E-value=7.7e-28  Score=206.75  Aligned_cols=152  Identities=19%  Similarity=0.226  Sum_probs=121.4

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC----cccCcCCCcccchHHhhhc
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ----FAEEIQTRQYRAPEVILRA   78 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~----~~~~~~~~~~~~PE~~~~~   78 (237)
                      +++..+..++.|++.||.|+|..+++||||||+|||++.++.+||+|||++......    .....++..|+|||++...
T Consensus       315 ~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  394 (495)
T 1opk_A          315 VSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYN  394 (495)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEECCTTCEECCTTCCEECCTTCCCCGGGCCHHHHHHC
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEECCCCcEEEeecccceeccCCceeecCCCcCCcceeCHhHHhcC
Confidence            577889999999999999999999999999999999999999999999998765422    1223446789999999988


Q ss_pred             CCCchhhhhhhhhHHHHHhc-CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccC
Q 026540           79 GYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKF  157 (237)
Q Consensus        79 ~~~~~~diws~g~~l~~~~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (237)
                      .++.++|+||+|++++++++ |..||.+..      .......+..                                  
T Consensus       395 ~~~~~sDvwSlG~~l~el~t~g~~p~~~~~------~~~~~~~~~~----------------------------------  434 (495)
T 1opk_A          395 KFSIKSDVWAFGVLLWEIATYGMSPYPGID------LSQVYELLEK----------------------------------  434 (495)
T ss_dssp             EECHHHHHHHHHHHHHHHHTTSCCSSTTCC------GGGHHHHHHT----------------------------------
T ss_pred             CCCcHHhHHhHHHHHHHHHhCCCCCCCCCC------HHHHHHHHHc----------------------------------
Confidence            89999999999999999998 888987653      1111111000                                  


Q ss_pred             CchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhc
Q 026540          158 WSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ  201 (237)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  201 (237)
                             ......+..++..+.+||.+||+.||.+|||+.++++
T Consensus       435 -------~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~  471 (495)
T 1opk_A          435 -------DYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ  471 (495)
T ss_dssp             -------TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             -------CCCCCCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHH
Confidence                   0011234456788999999999999999999999986

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=99.94  E-value=1.7e-27  Score=191.62  Aligned_cols=152  Identities=16%  Similarity=0.143  Sum_probs=117.5

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC-------cccCcCCCcccchHHh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ-------FAEEIQTRQYRAPEVI   75 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~-------~~~~~~~~~~~~PE~~   75 (237)
                      +++.++..++.|++.||.|+|..+++||||||+||+++.++.++|+|||++......       .....+++.|+|||.+
T Consensus       125 ~~~~~~~~i~~ql~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~  204 (298)
T 3f66_A          125 PTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL  204 (298)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECSCGGGCCCSCGGGCBC-----CCBCGGGSCHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEECCCCCEEECcccccccccccchhccccccCCCCCccccChHHh
Confidence            567889999999999999999999999999999999999999999999998654321       2233556789999999


Q ss_pred             hhcCCCchhhhhhhhhHHHHHhcC-CcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcc
Q 026540           76 LRAGYSFSVDMWSFACTAFELATG-DMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRR  154 (237)
Q Consensus        76 ~~~~~~~~~diws~g~~l~~~~~g-~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (237)
                      .+..++.++|+||+|++++++++| ..||.....      ......+...                              
T Consensus       205 ~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~------~~~~~~~~~~------------------------------  248 (298)
T 3f66_A          205 QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT------FDITVYLLQG------------------------------  248 (298)
T ss_dssp             HHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCT------TTHHHHHHTT------------------------------
T ss_pred             cCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCH------HHHHHHHhcC------------------------------
Confidence            999999999999999999999995 455544321      1111110000                              


Q ss_pred             ccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhc
Q 026540          155 LKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ  201 (237)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  201 (237)
                                 .....+...+..+.+++.+||..||.+|||++++++
T Consensus       249 -----------~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~  284 (298)
T 3f66_A          249 -----------RRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVS  284 (298)
T ss_dssp             -----------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             -----------CCCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence                       001113334678999999999999999999999986

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.94  E-value=3.1e-27  Score=193.32  Aligned_cols=153  Identities=15%  Similarity=0.171  Sum_probs=116.8

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC------cccCcCCCcccchHHhh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ------FAEEIQTRQYRAPEVIL   76 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~------~~~~~~~~~~~~PE~~~   76 (237)
                      +++.++..++.|++.||.|+|..+++||||||+||+++.++.+||+|||++......      .....++..|+|||.+.
T Consensus       144 ~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  223 (333)
T 1mqb_A          144 FSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAIS  223 (333)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCCCC-----------------CCCGGGSCHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChheEEECCCCcEEECCCCcchhhccccccccccCCCCccccccCchhcc
Confidence            678899999999999999999999999999999999999999999999998654321      11224467899999999


Q ss_pred             hcCCCchhhhhhhhhHHHHHhc-CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccc
Q 026540           77 RAGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRL  155 (237)
Q Consensus        77 ~~~~~~~~diws~g~~l~~~~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (237)
                      +..++.++|+||+|++++++++ |..||....      .......+...                               
T Consensus       224 ~~~~~~~~Di~slG~il~ellt~g~~pf~~~~------~~~~~~~~~~~-------------------------------  266 (333)
T 1mqb_A          224 YRKFTSASDVWSFGIVMWEVMTYGERPYWELS------NHEVMKAINDG-------------------------------  266 (333)
T ss_dssp             SCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC------HHHHHHHHHTT-------------------------------
T ss_pred             cCCCCchhhhHHHHHHHHHHHcCCCCCcccCC------HHHHHHHHHCC-------------------------------
Confidence            8889999999999999999998 999996542      22211111000                               


Q ss_pred             cCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcC
Q 026540          156 KFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQH  202 (237)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h  202 (237)
                                .....+..++..+.+++.+||+.||.+||++.+++++
T Consensus       267 ----------~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~  303 (333)
T 1mqb_A          267 ----------FRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSI  303 (333)
T ss_dssp             ----------CCCCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred             ----------CcCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence                      0011223456788999999999999999999999874

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=99.94  E-value=1.5e-27  Score=198.13  Aligned_cols=152  Identities=14%  Similarity=0.168  Sum_probs=111.8

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcCc------ccCcCCCcccchHHhh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQF------AEEIQTRQYRAPEVIL   76 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~~------~~~~~~~~~~~PE~~~   76 (237)
                      +++.++..++.|++.||.|+|..+++||||||+|||++.++.+||+|||++.......      ....++..|+|||.+.
T Consensus       144 ~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  223 (373)
T 2qol_A          144 FTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIA  223 (373)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC----------------------CTTSCHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEEcCCCCEEECcCccccccccCCccceeccCCCcCCCccChhhhc
Confidence            6788899999999999999999999999999999999999999999999986543221      1123356899999999


Q ss_pred             hcCCCchhhhhhhhhHHHHHhc-CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccc
Q 026540           77 RAGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRL  155 (237)
Q Consensus        77 ~~~~~~~~diws~g~~l~~~~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (237)
                      +..++.++|+||+|++++++++ |..||....      .......+...                               
T Consensus       224 ~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~------~~~~~~~i~~~-------------------------------  266 (373)
T 2qol_A          224 YRKFTSASDVWSYGIVLWEVMSYGERPYWEMS------NQDVIKAVDEG-------------------------------  266 (373)
T ss_dssp             HCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCC------HHHHHHHHHTT-------------------------------
T ss_pred             cCCcCchhcHHHHHHHHHHHHhCCCCCCCCCC------HHHHHHHHHcC-------------------------------
Confidence            9999999999999999999997 999997552      22211111000                               


Q ss_pred             cCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhc
Q 026540          156 KFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ  201 (237)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  201 (237)
                                .....+..++..+.+++.+||+.||.+||+++++++
T Consensus       267 ----------~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~  302 (373)
T 2qol_A          267 ----------YRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVS  302 (373)
T ss_dssp             ----------EECCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ----------CCCCCCccccHHHHHHHHHHhCcChhhCcCHHHHHH
Confidence                      001122345678899999999999999999999876

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=99.94  E-value=1.5e-27  Score=192.76  Aligned_cols=165  Identities=18%  Similarity=0.140  Sum_probs=122.5

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC-----cccCcCCCcccchHHhhh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ-----FAEEIQTRQYRAPEVILR   77 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~-----~~~~~~~~~~~~PE~~~~   77 (237)
                      +++..+..++.|++.||.|+|..+++|+||||+||+++.++.++|+|||++......     .....|++.|+|||.+.+
T Consensus       130 ~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~  209 (307)
T 2nru_A          130 LSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG  209 (307)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT
T ss_pred             CCHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEcCCCcEEEeecccccccccccccccccccCCCcCcCChHHhcC
Confidence            678889999999999999999999999999999999999999999999998654421     223467899999998864


Q ss_pred             cCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccC
Q 026540           78 AGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKF  157 (237)
Q Consensus        78 ~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (237)
                       .++.++|+||+|++++++++|..||.........      ..+.+......                            
T Consensus       210 -~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~------~~~~~~~~~~~----------------------------  254 (307)
T 2nru_A          210 -EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLL------LDIKEEIEDEE----------------------------  254 (307)
T ss_dssp             -EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBT------THHHHHHHTTS----------------------------
T ss_pred             -CCCccchhHHHHHHHHHHHHCCCCcccCcchHHH------HHHHHHhhhhh----------------------------
Confidence             4788999999999999999999999765322110      01111000000                            


Q ss_pred             CchhHHhh-hhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcC
Q 026540          158 WSLDRLLV-DKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQH  202 (237)
Q Consensus       158 ~~~~~~~~-~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h  202 (237)
                      ..+..... .....+...+..+.+++.+||+.||.+|||+++++++
T Consensus       255 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~  300 (307)
T 2nru_A          255 KTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQL  300 (307)
T ss_dssp             CCHHHHSCSSCSCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred             hhhhhhccccccccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence            00000000 0112345567889999999999999999999999863

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=99.94  E-value=8.7e-28  Score=195.96  Aligned_cols=159  Identities=16%  Similarity=0.203  Sum_probs=124.1

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCC---CCcEEEeecCcceecC-----cCcccCcCCCcccchHH
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGI---DMRCKVVDFGNACRAN-----KQFAEEIQTRQYRAPEV   74 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~---~~~~kl~dfg~~~~~~-----~~~~~~~~~~~~~~PE~   74 (237)
                      +++.++..++.|++.||.|+|..+++|+||||+||+++.   +..++|+|||++....     .......+++.|+|||.
T Consensus       137 ~~~~~~~~i~~qi~~al~~LH~~~i~H~dlkp~NIli~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~  216 (327)
T 2yfx_A          137 LAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEA  216 (327)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECCCHHHHHHHC------CCGGGSCGGGCCHHH
T ss_pred             ccHHHHHHHHHHHHHHHHHHhhCCeecCcCCHhHEEEecCCCcceEEECccccccccccccccccCCCcCCCcceeCHhH
Confidence            678889999999999999999999999999999999984   4569999999885332     12233466889999999


Q ss_pred             hhhcCCCchhhhhhhhhHHHHHhc-CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhc
Q 026540           75 ILRAGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIR  153 (237)
Q Consensus        75 ~~~~~~~~~~diws~g~~l~~~~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (237)
                      +.+..++.++|+||+|++++++++ |..||....      .......+...                             
T Consensus       217 ~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~------~~~~~~~~~~~-----------------------------  261 (327)
T 2yfx_A          217 FMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS------NQEVLEFVTSG-----------------------------  261 (327)
T ss_dssp             HHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC------HHHHHHHHHTT-----------------------------
T ss_pred             hcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcC------HHHHHHHHhcC-----------------------------
Confidence            999999999999999999999998 888886542      22211111000                             


Q ss_pred             cccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcc
Q 026540          154 RLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLR  208 (237)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~  208 (237)
                                  .....+..++..+.++|.+||+.||.+|||+.+++++.|+...
T Consensus       262 ------------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~  304 (327)
T 2yfx_A          262 ------------GRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQ  304 (327)
T ss_dssp             ------------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             ------------CCCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhc
Confidence                        0011233456788999999999999999999999999887643

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.94  E-value=1.8e-27  Score=206.25  Aligned_cols=159  Identities=18%  Similarity=0.234  Sum_probs=125.7

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC----cccCcCCCcccchHHhhhc
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ----FAEEIQTRQYRAPEVILRA   78 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~----~~~~~~~~~~~~PE~~~~~   78 (237)
                      +++.++..++.|++.||.|+|..+++||||||+|||++.++.+||+|||++......    .....++..|+|||.+...
T Consensus       360 l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  439 (535)
T 2h8h_A          360 LRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYG  439 (535)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHHHTTCSTTSCGGGSCHHHHHHC
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEEcCCCcEEEcccccceecCCCceecccCCcCcccccCHHHhccC
Confidence            678899999999999999999999999999999999999999999999998654321    1223456789999999999


Q ss_pred             CCCchhhhhhhhhHHHHHhc-CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccC
Q 026540           79 GYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKF  157 (237)
Q Consensus        79 ~~~~~~diws~g~~l~~~~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (237)
                      .++.++|+||+|++++++++ |..||.+..      ..+.+..+.+.                                 
T Consensus       440 ~~~~~sDvwSlGv~l~el~t~g~~P~~~~~------~~~~~~~i~~~---------------------------------  480 (535)
T 2h8h_A          440 RFTIKSDVWSFGILLTELTTKGRVPYPGMV------NREVLDQVERG---------------------------------  480 (535)
T ss_dssp             CCCHHHHHHHHHHHHHHHTTTTCCSSTTCC------HHHHHHHHHTT---------------------------------
T ss_pred             CCCchhhHHHHHHHHHHHHhCCCCCCCCCC------HHHHHHHHHcC---------------------------------
Confidence            99999999999999999999 889997652      22222211000                                 


Q ss_pred             CchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcC--CCcCcc
Q 026540          158 WSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQH--PWLSLR  208 (237)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h--p~f~~~  208 (237)
                              .....+..++..+.+||.+||+.||++|||++++++.  .+|...
T Consensus       481 --------~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~~  525 (535)
T 2h8h_A          481 --------YRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTST  525 (535)
T ss_dssp             --------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSCCC
T ss_pred             --------CCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhhcc
Confidence                    0111234557789999999999999999999999874  566543

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=99.94  E-value=4.4e-27  Score=186.37  Aligned_cols=151  Identities=15%  Similarity=0.135  Sum_probs=119.2

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhc--CCccCCCCCccccCCCCcEEEeecCcceecCcCcccCcCCCcccchHHhhhcCC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASM--GGIELPKPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGY   80 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~--~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~PE~~~~~~~   80 (237)
                      +++.++..++.|++.||.|+|..+  ++|+||||+||+++.++.++++||+++....  .....+++.|+|||.+.+..+
T Consensus       108 ~~~~~~~~i~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~  185 (271)
T 3kmu_A          108 VDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQ--SPGRMYAPAWVAPEALQKKPE  185 (271)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHTTSSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTS--CTTCBSCGGGSCHHHHHSCGG
T ss_pred             CCHHHHHHHHHHHHHHHHHHhcCCCceecCCCccceEEEcCCcceeEEeccceeeec--ccCccCCccccChhhhccCCC
Confidence            688999999999999999999999  9999999999999999999999888764422  234577899999999987654


Q ss_pred             C---chhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccC
Q 026540           81 S---FSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKF  157 (237)
Q Consensus        81 ~---~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (237)
                      +   .++|+||+|++++++++|..||....      ...........  .                              
T Consensus       186 ~~~~~~~Di~slG~il~el~~g~~p~~~~~------~~~~~~~~~~~--~------------------------------  227 (271)
T 3kmu_A          186 DTNRRSADMWSFAVLLWELVTREVPFADLS------NMEIGMKVALE--G------------------------------  227 (271)
T ss_dssp             GSCHHHHHHHHHHHHHHHHHHCSCTTTTSC------HHHHHHHHHHS--C------------------------------
T ss_pred             CCCCchhhHHHHHHHHHHHHhCCCCccccC------hHHHHHHHHhc--C------------------------------
Confidence            3   47999999999999999999997552      21111111000  0                              


Q ss_pred             CchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhc
Q 026540          158 WSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ  201 (237)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  201 (237)
                              .....+...+..+.+++.+||+.||.+|||++++++
T Consensus       228 --------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  263 (271)
T 3kmu_A          228 --------LRPTIPPGISPHVSKLMKICMNEDPAKRPKFDMIVP  263 (271)
T ss_dssp             --------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             --------CCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence                    011223445778999999999999999999999985

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=99.94  E-value=7.5e-28  Score=195.73  Aligned_cols=165  Identities=20%  Similarity=0.202  Sum_probs=122.1

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC------cccCcCCCcccchHHhh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ------FAEEIQTRQYRAPEVIL   76 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~------~~~~~~~~~~~~PE~~~   76 (237)
                      +++.++..++.|++.+|.|+|..+++|+||||+||+++.++.++|+|||++......      .....++..|+|||.+.
T Consensus       131 ~~~~~~~~i~~~l~~~l~~LH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  210 (318)
T 3lxp_A          131 IGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLK  210 (318)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCGGGCEECCTTCSEEEC---CCCCGGGCCHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEEcCCCCEEECCccccccccccccccccccCCCCCceeeChHHhc
Confidence            578899999999999999999999999999999999999999999999999765432      22345677899999999


Q ss_pred             hcCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcccc
Q 026540           77 RAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLK  156 (237)
Q Consensus        77 ~~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (237)
                      +..++.++|+||+|++++++++|..||....        ..   .....+.......        ..             
T Consensus       211 ~~~~~~~~Di~slG~il~~ll~g~~p~~~~~--------~~---~~~~~~~~~~~~~--------~~-------------  258 (318)
T 3lxp_A          211 EYKFYYASDVWSFGVTLYELLTHCDSSQSPP--------TK---FLELIGIAQGQMT--------VL-------------  258 (318)
T ss_dssp             HCEEEHHHHHHHHHHHHHHHHTTTCGGGSHH--------HH---HHHHHCSCCHHHH--------HH-------------
T ss_pred             CCCCCcHHHHHHHHHHHHHHHhCCCcccccc--------hh---hhhhhcccccchh--------HH-------------
Confidence            8889999999999999999999999986431        00   0000000000000        00             


Q ss_pred             CCchhHHhh--hhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhc
Q 026540          157 FWSLDRLLV--DKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ  201 (237)
Q Consensus       157 ~~~~~~~~~--~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  201 (237)
                        .......  .....+..++..+.+||.+||+.||.+|||++|+++
T Consensus       259 --~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~  303 (318)
T 3lxp_A          259 --RLTELLERGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIP  303 (318)
T ss_dssp             --HHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             --HHHHHHhcccCCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence              0000000  012234556788999999999999999999999985

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=99.94  E-value=1.8e-27  Score=190.75  Aligned_cols=153  Identities=18%  Similarity=0.164  Sum_probs=119.7

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC------cccCcCCCcccchHHhh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ------FAEEIQTRQYRAPEVIL   76 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~------~~~~~~~~~~~~PE~~~   76 (237)
                      +++.++..++.|++.||.|+|..+++|+||||+||+++.++.++|+|||++......      .....++..|+|||.+.
T Consensus       118 ~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  197 (291)
T 1u46_A          118 FLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLK  197 (291)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCTTCEECCC-CCEEEC-----CCGGGCCHHHHH
T ss_pred             cCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEEcCCCCEEEccccccccccccccchhhhccCCCCceeeCchhhc
Confidence            578899999999999999999999999999999999999999999999998665322      12335567899999999


Q ss_pred             hcCCCchhhhhhhhhHHHHHhc-CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccc
Q 026540           77 RAGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRL  155 (237)
Q Consensus        77 ~~~~~~~~diws~g~~l~~~~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (237)
                      +..++.++|+||+|++++++++ |..||....      .......+...   .                           
T Consensus       198 ~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~------~~~~~~~~~~~---~---------------------------  241 (291)
T 1u46_A          198 TRTFSHASDTWMFGVTLWEMFTYGQEPWIGLN------GSQILHKIDKE---G---------------------------  241 (291)
T ss_dssp             HCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCC------HHHHHHHHHTS---C---------------------------
T ss_pred             CCCCCchhhHHHHHHHHHHHHhCCCCCcccCC------HHHHHHHHHcc---C---------------------------
Confidence            8888999999999999999999 999997653      21111111000   0                           


Q ss_pred             cCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhc
Q 026540          156 KFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ  201 (237)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  201 (237)
                                .....+...+..+.+++.+||..||.+|||+.++++
T Consensus       242 ----------~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~  277 (291)
T 1u46_A          242 ----------ERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRD  277 (291)
T ss_dssp             ----------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ----------CCCCCCcCcCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence                      001122345678999999999999999999999986

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=99.94  E-value=7.6e-28  Score=199.23  Aligned_cols=104  Identities=14%  Similarity=0.203  Sum_probs=93.7

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCC-----------CCcEEEeecCcceecC-----cCcccCcCC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGI-----------DMRCKVVDFGNACRAN-----KQFAEEIQT   66 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~-----------~~~~kl~dfg~~~~~~-----~~~~~~~~~   66 (237)
                      +++.++..++.|++.||.|+|..+++||||||+|||++.           ++.+||+|||++....     .......||
T Consensus       169 l~~~~~~~i~~qi~~~L~~lH~~~ivHrDiKp~NIll~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt  248 (365)
T 3e7e_A          169 MPQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCET  248 (365)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECGGGTCC------CTTEEECCCTTCEEGGGSCTTEEECCSSCT
T ss_pred             CCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEecccccCccccccccCCEEEeeCchhhhhhccCCCceeeeecCC
Confidence            678899999999999999999999999999999999988           8999999999996542     233456789


Q ss_pred             CcccchHHhhhcCCCchhhhhhhhhHHHHHhcCCcccCCC
Q 026540           67 RQYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPK  106 (237)
Q Consensus        67 ~~~~~PE~~~~~~~~~~~diws~g~~l~~~~~g~~~f~~~  106 (237)
                      +.|+|||++.+..++.++|+||+|+++++|++|..||...
T Consensus       249 ~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~  288 (365)
T 3e7e_A          249 SGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKN  288 (365)
T ss_dssp             TSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEE
T ss_pred             CCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccC
Confidence            9999999999989999999999999999999999998643

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=99.94  E-value=5.5e-27  Score=189.75  Aligned_cols=155  Identities=20%  Similarity=0.227  Sum_probs=112.1

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC---cccCcCCCcccchHHhhhcC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ---FAEEIQTRQYRAPEVILRAG   79 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~~~~PE~~~~~~   79 (237)
                      +++..+..++.|++.||.|+|..+++|+||||+||+++.++.++|+|||++......   .....+++.|++||.+.+..
T Consensus       133 ~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  212 (310)
T 2wqm_A          133 IPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENG  212 (310)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCC------------------CCSSCCHHHHTTCC
T ss_pred             CCHHHHHHHHHHHHHHHHHHhhCCeeCCCCcHHHEEEcCCCCEEEEeccceeeecCCCccccccCCCeeEeChHHhCCCC
Confidence            578889999999999999999999999999999999999999999999998654322   23446789999999999888


Q ss_pred             CCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCc
Q 026540           80 YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWS  159 (237)
Q Consensus        80 ~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (237)
                      ++.++|+||+|++++++++|..||.+..     .....+....... ..                               
T Consensus       213 ~~~~~Dv~slG~il~~l~~g~~p~~~~~-----~~~~~~~~~~~~~-~~-------------------------------  255 (310)
T 2wqm_A          213 YNFKSDIWSLGCLLYEMAALQSPFYGDK-----MNLYSLCKKIEQC-DY-------------------------------  255 (310)
T ss_dssp             CCHHHHHHHHHHHHHHHHHSSCTTC--------CCHHHHHHHHHTT-CS-------------------------------
T ss_pred             CCchhhHHHHHHHHHHHHhCCCCCcccc-----hhHHHHHHHhhcc-cC-------------------------------
Confidence            9999999999999999999999997542     1111111100000 00                               


Q ss_pred             hhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhc
Q 026540          160 LDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ  201 (237)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  201 (237)
                             ........+..+.+++.+||..||.+|||++++++
T Consensus       256 -------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~il~  290 (310)
T 2wqm_A          256 -------PPLPSDHYSEELRQLVNMCINPDPEKRPDVTYVYD  290 (310)
T ss_dssp             -------CCCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             -------CCCcccccCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence                   00011234678899999999999999999999986

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=99.94  E-value=4.2e-27  Score=190.58  Aligned_cols=154  Identities=19%  Similarity=0.248  Sum_probs=112.1

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCc----CcccCcCCCcccchHHhhhc
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK----QFAEEIQTRQYRAPEVILRA   78 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~----~~~~~~~~~~~~~PE~~~~~   78 (237)
                      +++.++..++.|++.+|.|+|..+++|+||||+||+++.++.++|+|||++.....    ......+++.|+|||.+.+.
T Consensus       131 ~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  210 (309)
T 2h34_A          131 LAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYMAPERFSES  210 (309)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSCCC----------------CCGGGCCGGGTCC-
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCcCCcCCCChHHEEEcCCCCEEEecCccCccccccccccccccCCCcCccCHHHHcCC
Confidence            57889999999999999999999999999999999999999999999998865432    22345678999999999888


Q ss_pred             CCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCC
Q 026540           79 GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFW  158 (237)
Q Consensus        79 ~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (237)
                      .++.++|+||+|++++++++|..||....       ...+...  +....+.                            
T Consensus       211 ~~~~~~Di~slG~il~~l~~g~~pf~~~~-------~~~~~~~--~~~~~~~----------------------------  253 (309)
T 2h34_A          211 HATYRADIYALTCVLYECLTGSPPYQGDQ-------LSVMGAH--INQAIPR----------------------------  253 (309)
T ss_dssp             ---CCCHHHHHHHHHHHHHHSSCSSCSCH-------HHHHHHH--HHSCCCC----------------------------
T ss_pred             CCCchHhHHHHHHHHHHHHHCCCCCCCch-------HHHHHHH--hccCCCC----------------------------
Confidence            88999999999999999999999997542       1111111  1100000                            


Q ss_pred             chhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCC-CHHHHhc
Q 026540          159 SLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRP-TAQQCLQ  201 (237)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~-t~~ell~  201 (237)
                              ....+..++..+.++|.+||+.||.+|| |++++++
T Consensus       254 --------~~~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~  289 (309)
T 2h34_A          254 --------PSTVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSA  289 (309)
T ss_dssp             --------GGGTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHH
T ss_pred             --------ccccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHH
Confidence                    0012334567889999999999999999 8888775

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=99.94  E-value=7.2e-27  Score=206.65  Aligned_cols=153  Identities=14%  Similarity=0.156  Sum_probs=120.7

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC----cccCcCCCcccchHHhhh
Q 026540            2 TIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ----FAEEIQTRQYRAPEVILR   77 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~----~~~~~~~~~~~~PE~~~~   77 (237)
                      .+++..+..++.|++.||.|+|..+++||||||+|||++.++.+||+|||++......    .....+++.|+|||.+.+
T Consensus       487 ~l~~~~~~~i~~qi~~aL~~LH~~givHrDikp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~~~~t~~y~aPE~~~~  566 (656)
T 2j0j_A          487 SLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINF  566 (656)
T ss_dssp             TCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCCCCCSCCC----------CCGGGCCHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCccccccchHhEEEeCCCCEEEEecCCCeecCCCcceeccCCCCCcceeCHHHhcC
Confidence            3678889999999999999999999999999999999999999999999998654322    123345678999999998


Q ss_pred             cCCCchhhhhhhhhHHHHHhc-CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcccc
Q 026540           78 AGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLK  156 (237)
Q Consensus        78 ~~~~~~~diws~g~~l~~~~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (237)
                      ..++.++|+||+|++++++++ |..||.+..      ..+....+...                                
T Consensus       567 ~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~------~~~~~~~i~~~--------------------------------  608 (656)
T 2j0j_A          567 RRFTSASDVWMFGVCMWEILMHGVKPFQGVK------NNDVIGRIENG--------------------------------  608 (656)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC------HHHHHHHHHHT--------------------------------
T ss_pred             CCCCchhhHHHHHHHHHHHHHcCCCCCCCCC------HHHHHHHHHcC--------------------------------
Confidence            899999999999999999997 889997652      22222221110                                


Q ss_pred             CCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhc
Q 026540          157 FWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ  201 (237)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  201 (237)
                               .....+..++..+.+++.+||..||.+|||+.++++
T Consensus       609 ---------~~~~~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~  644 (656)
T 2j0j_A          609 ---------ERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKA  644 (656)
T ss_dssp             ---------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ---------CCCCCCccccHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence                     011223455778999999999999999999999985

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=99.94  E-value=3.1e-27  Score=193.59  Aligned_cols=164  Identities=15%  Similarity=0.143  Sum_probs=118.5

Q ss_pred             hhHHHHHHHHHHHHhhhhhhh--------hhcCCccCCCCCccccCCCCcEEEeecCcceecCcC-------cccCcCCC
Q 026540            3 IVEKKLKRRAKRAVANISIRR--------ASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ-------FAEEIQTR   67 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~--------~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~-------~~~~~~~~   67 (237)
                      +++.++..++.|++.||.|+|        ..+++||||||+||+++.++.+||+|||++......       .....+++
T Consensus       136 ~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~  215 (342)
T 1b6c_B          136 VTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTK  215 (342)
T ss_dssp             BCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTTSCEEECCCTTCEEEETTTTEEEECCCSCCCCG
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCCCCEEEEECCCceeccccccccccccccCCcCc
Confidence            578899999999999999999        899999999999999999999999999998654322       23457899


Q ss_pred             cccchHHhhhcC------CCchhhhhhhhhHHHHHhcC----------CcccCCCCCCCCCChHHHHHHHHHHHCCCCHH
Q 026540           68 QYRAPEVILRAG------YSFSVDMWSFACTAFELATG----------DMLFAPKSGQGFCEDEDHLALMMELIGKMPRK  131 (237)
Q Consensus        68 ~~~~PE~~~~~~------~~~~~diws~g~~l~~~~~g----------~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~  131 (237)
                      .|+|||.+.+..      ++.++|+||+|++++++++|          ..||.......  .....+.   +....    
T Consensus       216 ~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~~~~--~~~~~~~---~~~~~----  286 (342)
T 1b6c_B          216 RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSD--PSVEEMR---KVVCE----  286 (342)
T ss_dssp             GGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSS--CCHHHHH---HHHTT----
T ss_pred             ccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCccccCcCc--ccHHHHH---HHHHH----
Confidence            999999998653      23689999999999999999          56665432110  0111111   11000    


Q ss_pred             HHhcCCCchhhhcccCccchhccccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcC
Q 026540          132 IAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQH  202 (237)
Q Consensus       132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h  202 (237)
                                    .. .       ......    . ......+..+.+++.+||+.||.+|||+++++++
T Consensus       287 --------------~~-~-------~~~~~~----~-~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~  330 (342)
T 1b6c_B          287 --------------QK-L-------RPNIPN----R-WQSCEALRVMAKIMRECWYANGAARLTALRIKKT  330 (342)
T ss_dssp             --------------SC-C-------CCCCCG----G-GGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHH
T ss_pred             --------------HH-h-------CCCCcc----c-ccchhHHHHHHHHHHHHhccChhhCCCHHHHHHH
Confidence                          00 0       000000    0 0123456789999999999999999999999875

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=99.94  E-value=8.3e-27  Score=190.90  Aligned_cols=155  Identities=12%  Similarity=0.076  Sum_probs=115.7

Q ss_pred             hhHHHHHHHHHHHHhhhhhhh-hhcCCccCCCCCccccCCCC--------------------cEEEeecCcceecCcCcc
Q 026540            3 IVEKKLKRRAKRAVANISIRR-ASMGGIELPKPERCLDGIDM--------------------RCKVVDFGNACRANKQFA   61 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~-~~~~~h~d~kp~Nili~~~~--------------------~~kl~dfg~~~~~~~~~~   61 (237)
                      +++.+++.++.|++.||.|+| ..+++||||||+|||++.++                    .+||+|||++......  
T Consensus       158 ~~~~~~~~i~~qi~~aL~~lH~~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~--  235 (336)
T 2vuw_A          158 SSLATAKSILHQLTASLAVAEASLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG--  235 (336)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT--
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHhCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC--
Confidence            578999999999999999999 99999999999999999876                    8999999999765443  


Q ss_pred             cCcCCCcccchHHhhhcCCCchhhhhhhhhH-HHHHhcCCcccCCCCCCCCCChHHHHHHHH-HHHCCCCHHHHhcCCCc
Q 026540           62 EEIQTRQYRAPEVILRAGYSFSVDMWSFACT-AFELATGDMLFAPKSGQGFCEDEDHLALMM-ELIGKMPRKIAIGGAQS  139 (237)
Q Consensus        62 ~~~~~~~~~~PE~~~~~~~~~~~diws~g~~-l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  139 (237)
                      ...||+.|+|||++.+.. +.++|+||++++ .++++.|..||...         ....... ......        .. 
T Consensus       236 ~~~gt~~y~aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~---------~~~~~~~~~~~~~~--------~~-  296 (336)
T 2vuw_A          236 IVVFCDVSMDEDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNV---------LWLHYLTDKMLKQM--------TF-  296 (336)
T ss_dssp             EEECCCCTTCSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHH---------HHHHHHHHHHHHTC--------CC-
T ss_pred             cEEEeecccChhhhcCCC-ccceehhhhhCCCCcccccccCCCcch---------hhhhHHHHhhhhhh--------cc-
Confidence            347899999999998666 889999998766 66778888887421         0001111 110000        00 


Q ss_pred             hhhhcccCccchhccccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHh-cCCCcC
Q 026540          140 KDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCL-QHPWLS  206 (237)
Q Consensus       140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell-~hp~f~  206 (237)
                                      ......       ......++++.+||.+||++|     |++|+| +||||+
T Consensus       297 ----------------~~~~~~-------~~~~~~s~~~~dli~~~L~~d-----sa~e~l~~Hp~f~  336 (336)
T 2vuw_A          297 ----------------KTKCNT-------PAMKQIKRKIQEFHRTMLNFS-----SATDLLCQHSLFK  336 (336)
T ss_dssp             ----------------SSCCCS-------HHHHHHHHHHHHHHHHGGGSS-----SHHHHHHHCGGGC
T ss_pred             ----------------Ccccch-------hhhhhcCHHHHHHHHHHhccC-----CHHHHHhcCCCcC
Confidence                            000000       012346889999999999976     999999 999995

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=99.93  E-value=2e-26  Score=187.04  Aligned_cols=152  Identities=17%  Similarity=0.144  Sum_probs=114.3

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecC--------cCcccCcCCCcccchHH
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRAN--------KQFAEEIQTRQYRAPEV   74 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~--------~~~~~~~~~~~~~~PE~   74 (237)
                      +++.++..++.|++.||.|+|..+++|+||||+||+++ ++.++|+|||++....        .......|++.|+|||.
T Consensus       127 ~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~  205 (319)
T 2y4i_B          127 LDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEI  205 (319)
T ss_dssp             CCSHHHHHHHHHHHHHHHHHHHTTCCCCCCCSTTEEEC---CCEECCCSCCC----------CCSCBCCSGGGGTSCHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCccccCCChhhEEEe-CCCEEEeecCCccccccccccccccccccCCCcccccChHH
Confidence            67889999999999999999999999999999999998 6799999999875432        12233457889999999


Q ss_pred             hhh---------cCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcc
Q 026540           75 ILR---------AGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDR  145 (237)
Q Consensus        75 ~~~---------~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  145 (237)
                      +.+         ..++.++|+||+|++++++++|..||....      .......+...  ..                 
T Consensus       206 ~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~------~~~~~~~~~~~--~~-----------------  260 (319)
T 2y4i_B          206 IRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQP------AEAIIWQMGTG--MK-----------------  260 (319)
T ss_dssp             HSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCC------HHHHHHHHHTT--CC-----------------
T ss_pred             hhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHhccC--CC-----------------
Confidence            975         347889999999999999999999997652      22211111000  00                 


Q ss_pred             cCccchhccccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhc
Q 026540          146 HGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ  201 (237)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  201 (237)
                                           ........+..+.+++.+||..||.+|||+.++++
T Consensus       261 ---------------------~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~  295 (319)
T 2y4i_B          261 ---------------------PNLSQIGMGKEISDILLFCWAFEQEERPTFTKLMD  295 (319)
T ss_dssp             ---------------------CCCCCSSCCTTHHHHHHHHHCSSTTTSCCHHHHHH
T ss_pred             ---------------------CCCCcCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence                                 00001123566889999999999999999999987

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=99.93  E-value=7.2e-27  Score=189.57  Aligned_cols=155  Identities=19%  Similarity=0.267  Sum_probs=118.0

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC------------cccCcCCCccc
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ------------FAEEIQTRQYR   70 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~------------~~~~~~~~~~~   70 (237)
                      +++.++..++.|++.||.|+|..+++|+||||+||+++.++.++|+|||++......            .....+++.|+
T Consensus       131 ~~~~~~~~i~~qi~~~L~~LH~~~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~  210 (317)
T 2buj_A          131 LTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYR  210 (317)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCSSCEESCEEEESHHHHHHHHHHHHHHSCGGGC
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCCEEEEecCcchhcccccccccccccccccccccCCcccC
Confidence            678899999999999999999999999999999999999999999999987654311            12235688999


Q ss_pred             chHHhhhcC---CCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccC
Q 026540           71 APEVILRAG---YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHG  147 (237)
Q Consensus        71 ~PE~~~~~~---~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  147 (237)
                      |||.+.+..   ++.++|+||+|++++++++|..||.......  ..   ...  ....                     
T Consensus       211 aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~--~~---~~~--~~~~---------------------  262 (317)
T 2buj_A          211 APELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKG--DS---VAL--AVQN---------------------  262 (317)
T ss_dssp             CGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTT--SC---HHH--HHHC---------------------
T ss_pred             CHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhccc--ch---hhH--Hhhc---------------------
Confidence            999987543   6889999999999999999999985311000  00   000  0000                     


Q ss_pred             ccchhccccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcC
Q 026540          148 DLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQH  202 (237)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h  202 (237)
                                       ..........+..+.++|.+||+.||.+|||+++++++
T Consensus       263 -----------------~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~  300 (317)
T 2buj_A          263 -----------------QLSIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQ  300 (317)
T ss_dssp             -----------------C--CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             -----------------cCCCCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHH
Confidence                             00011123446789999999999999999999999985

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=99.93  E-value=6.5e-27  Score=190.75  Aligned_cols=166  Identities=18%  Similarity=0.157  Sum_probs=121.7

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC------cccCcCCCcccchHHhh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ------FAEEIQTRQYRAPEVIL   76 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~------~~~~~~~~~~~~PE~~~   76 (237)
                      +++.++..++.|++.||.|+|..+++|+||||+||+++.++.++|+|||++......      .....++..|+|||.+.
T Consensus       142 ~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  221 (326)
T 2w1i_A          142 IDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLT  221 (326)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCTTCEECCSSCSEEECSSCCSCCGGGCCHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEEcCCCcEEEecCcchhhccccccccccccCCCCceeEECchhhc
Confidence            678899999999999999999999999999999999999999999999998765432      12234567799999999


Q ss_pred             hcCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcccc
Q 026540           77 RAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLK  156 (237)
Q Consensus        77 ~~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (237)
                      +..++.++|+||+|++++++++|..||....           ....+..+.......        ..             
T Consensus       222 ~~~~~~~~Di~slG~il~el~tg~~~~~~~~-----------~~~~~~~~~~~~~~~--------~~-------------  269 (326)
T 2w1i_A          222 ESKFSVASDVWSFGVVLYELFTYIEKSKSPP-----------AEFMRMIGNDKQGQM--------IV-------------  269 (326)
T ss_dssp             HCEEEHHHHHHHHHHHHHHHHHTTCGGGSHH-----------HHHHHHHCTTCCTHH--------HH-------------
T ss_pred             CCCCCchhhHHHHHHHHHHHHhcCCCCCCCH-----------HHHHHhhccccchhh--------hH-------------
Confidence            8889999999999999999999998875321           001111111000000        00             


Q ss_pred             CCchhHHhhh--hcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhc
Q 026540          157 FWSLDRLLVD--KYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ  201 (237)
Q Consensus       157 ~~~~~~~~~~--~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  201 (237)
                       ..+......  ....+..++..+.++|.+||..||.+|||+.++++
T Consensus       270 -~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~  315 (326)
T 2w1i_A          270 -FHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLAL  315 (326)
T ss_dssp             -HHHHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             -HHHHHHhhcCCCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence             000000000  11234456788999999999999999999999985

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=99.92  E-value=1.8e-25  Score=198.86  Aligned_cols=148  Identities=16%  Similarity=0.140  Sum_probs=119.8

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcCcccCcCCCcccchHHhhhcCCCc
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSF   82 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~   82 (237)
                      +++.++..++.|++.+|.|+|..+++||||||+|||++.+ .+||+|||++...... ....||+.|++||++.+.. +.
T Consensus       179 l~~~~~~~~~~qi~~aL~~lH~~giiHrDlkp~NIll~~~-~~kl~DFG~a~~~~~~-~~~~gt~~y~aPE~~~~~~-~~  255 (681)
T 2pzi_A          179 LPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLTEE-QLKLIDLGAVSRINSF-GYLYGTPGFQAPEIVRTGP-TV  255 (681)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECSS-CEEECCCTTCEETTCC-SCCCCCTTTSCTTHHHHCS-CH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCCeecccChHHeEEeCC-cEEEEecccchhcccC-CccCCCccccCHHHHcCCC-CC
Confidence            6788999999999999999999999999999999999986 8999999999766543 4567899999999987654 88


Q ss_pred             hhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCchhH
Q 026540           83 SVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDR  162 (237)
Q Consensus        83 ~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (237)
                      ++|+||+|++++++++|..||.+......                 +                          ...+   
T Consensus       256 ~sDi~slG~~l~~l~~g~~~~~~~~~~~~-----------------~--------------------------~~~~---  289 (681)
T 2pzi_A          256 ATDIYTVGRTLAALTLDLPTRNGRYVDGL-----------------P--------------------------EDDP---  289 (681)
T ss_dssp             HHHHHHHHHHHHHHHSCCCEETTEECSSC-----------------C--------------------------TTCH---
T ss_pred             ceehhhhHHHHHHHHhCCCCCcccccccc-----------------c--------------------------cccc---
Confidence            99999999999999999888754310000                 0                          0000   


Q ss_pred             HhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCc
Q 026540          163 LLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSL  207 (237)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~  207 (237)
                              ....+..+.++|.+||+.||.+||+..+.+.|+|+..
T Consensus       290 --------~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~  326 (681)
T 2pzi_A          290 --------VLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGV  326 (681)
T ss_dssp             --------HHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred             --------ccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHH
Confidence                    0112467889999999999999999888888888764

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=99.86  E-value=1.6e-22  Score=161.93  Aligned_cols=133  Identities=8%  Similarity=-0.040  Sum_probs=98.0

Q ss_pred             hHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcCcccCcCCCcccchHHhhhcCCCch
Q 026540            4 VEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFS   83 (237)
Q Consensus         4 ~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~   83 (237)
                      .+.++.+++.|++.||.|+|..+++||||||+|||++.++.++|++++.                 ++       .++.+
T Consensus       127 ~~~~~~~i~~ql~~aL~~lH~~givH~Dikp~NIll~~~g~~kl~~~~~-----------------~~-------~~~~~  182 (286)
T 3uqc_A          127 SPVGAIRAMQSLAAAADAAHRAGVALSIDHPSRVRVSIDGDVVLAYPAT-----------------MP-------DANPQ  182 (286)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEETTSCEEECSCCC-----------------CT-------TCCHH
T ss_pred             ChHHHHHHHHHHHHHHHHHHHCCCccCCCCcccEEEcCCCCEEEEeccc-----------------cC-------CCCch
Confidence            4567899999999999999999999999999999999999999985432                 22       36789


Q ss_pred             hhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCchhHH
Q 026540           84 VDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDRL  163 (237)
Q Consensus        84 ~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  163 (237)
                      +|+||+|+++|++++|..||.+.+....                              .....   ....  .....   
T Consensus       183 ~Di~slG~il~elltg~~Pf~~~~~~~~------------------------------~~~~~---~~~~--~~~~~---  224 (286)
T 3uqc_A          183 DDIRGIGASLYALLVNRWPLPEAGVRSG------------------------------LAPAE---RDTA--GQPIE---  224 (286)
T ss_dssp             HHHHHHHHHHHHHHHSEECSCCCSBCCC------------------------------SEECC---BCTT--SCBCC---
T ss_pred             hHHHHHHHHHHHHHHCCCCCCcCCcchh------------------------------hHHHH---HHhc--cCCCC---
Confidence            9999999999999999999986541100                              00000   0000  00000   


Q ss_pred             hhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcC
Q 026540          164 LVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQH  202 (237)
Q Consensus       164 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h  202 (237)
                         .......++..+.++|.+||+.||.+| |++|+++.
T Consensus       225 ---~~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~  259 (286)
T 3uqc_A          225 ---PADIDRDIPFQISAVAARSVQGDGGIR-SASTLLNL  259 (286)
T ss_dssp             ---HHHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHH
T ss_pred             ---hhhcccCCCHHHHHHHHHHcccCCccC-CHHHHHHH
Confidence               001123456789999999999999999 99999873

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=99.76  E-value=3.4e-20  Score=161.44  Aligned_cols=94  Identities=11%  Similarity=0.034  Sum_probs=65.2

Q ss_pred             HHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCc---CcccCcCCCcccchHHhhhcCCCchhh
Q 026540            9 KRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK---QFAEEIQTRQYRAPEVILRAGYSFSVD   85 (237)
Q Consensus         9 ~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~---~~~~~~~~~~~~~PE~~~~~~~~~~~d   85 (237)
                      .+|+.|+++||.|+|..+|+||||||+|||++.++.+||+|||+++....   .....+||+.|++||++.+ .+...+|
T Consensus       342 ~~I~~QIl~AL~ylH~~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~~~~~t~vGTp~YmAPE~l~g-~~~~~~d  420 (569)
T 4azs_A          342 EKILGSLLRSLAALEKQGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDCSWPTNLVQSFFVFVNELFAE-NKSWNGF  420 (569)
T ss_dssp             HHHHHHHHHHHHHHHHTTCEESCCCGGGEEECTTSCEEECCCTTEESCC---CCSHHHHHHHHHHHHHHC----------
T ss_pred             HHHHHHHHHHHHHHHHCCceeccCchHhEEECCCCCEEEeecccCeeCCCCCccccCceechhhccHHHhCC-CCCCccc
Confidence            45899999999999999999999999999999999999999999975543   2334578999999999865 4566799


Q ss_pred             hhhhhhHHHHHhcCCccc
Q 026540           86 MWSFACTAFELATGDMLF  103 (237)
Q Consensus        86 iws~g~~l~~~~~g~~~f  103 (237)
                      +|++|+..+.+.++..++
T Consensus       421 ~~s~g~~~~~l~~~~~~~  438 (569)
T 4azs_A          421 WRSAPVHPFNLPQPWSNW  438 (569)
T ss_dssp             --------CCCCTTHHHH
T ss_pred             ccccccchhhhccccchh
Confidence            999999888777665443

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=99.49  E-value=4.8e-15  Score=128.34  Aligned_cols=94  Identities=13%  Similarity=0.047  Sum_probs=78.6

Q ss_pred             HHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC----------cccCcCCCcccchHHhhh
Q 026540            8 LKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ----------FAEEIQTRQYRAPEVILR   77 (237)
Q Consensus         8 ~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~----------~~~~~~~~~~~~PE~~~~   77 (237)
                      +..++.|++.+|.|+|..+++||||||+|||++.  .+||+|||+++.....          .....||+.|++||++..
T Consensus       433 ~~~i~~qi~~aL~~LH~~gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~GT~~y~APEv~~~  510 (540)
T 3en9_A          433 NLDIAYKIGEIVGKLHKNDVIHNDLTTSNFIFDK--DLYIIDFGLGKISNLDEDKAVDLIVFKKAVLSTHHEKFDEIWER  510 (540)
T ss_dssp             CTHHHHHHHHHHHHHHHTTEECTTCCTTSEEESS--SEEECCCTTCEECCCHHHHHHHHHHHHHHHHHHCGGGHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHCcCccCCCCHHHEEECC--eEEEEECccCEECCCccccccchhhhhhhhcCCCCcCCHHHHHH
Confidence            4578999999999999999999999999999999  9999999999776532          124578999999999987


Q ss_pred             --cCCCchhhhhhhhhHHHHHhcCCccc
Q 026540           78 --AGYSFSVDMWSFACTAFELATGDMLF  103 (237)
Q Consensus        78 --~~~~~~~diws~g~~l~~~~~g~~~f  103 (237)
                        ..|+..+|.|+..+-..+.+.++.+|
T Consensus       511 ~~~~Y~~~~d~ws~vl~~l~~v~~r~rY  538 (540)
T 3en9_A          511 FLEGYKSVYDRWEIILELMKDVERRARY  538 (540)
T ss_dssp             HHHHHHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred             HHHHHHHHHhHHHHHHHHHHHHHhcccc
Confidence              46788889999888777766555443

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=99.22  E-value=4.3e-12  Score=101.06  Aligned_cols=59  Identities=7%  Similarity=-0.086  Sum_probs=51.5

Q ss_pred             HHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcCcccCcCCCcccchHHhh
Q 026540            7 KLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVIL   76 (237)
Q Consensus         7 ~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~PE~~~   76 (237)
                      ++..++.|++.||.|+|..+++||||||+|||++ ++.++|+|||++..          +..+.+||.+.
T Consensus       194 ~~~~i~~qi~~~l~~lH~~giiHrDlkp~NILl~-~~~vkl~DFG~a~~----------~~~~~a~e~l~  252 (282)
T 1zar_A          194 NPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVS-EEGIWIIDFPQSVE----------VGEEGWREILE  252 (282)
T ss_dssp             CHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEE-TTEEEECCCTTCEE----------TTSTTHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHCCCEeCCCCHHHEEEE-CCcEEEEECCCCeE----------CCCCCHHHHHH
Confidence            4567999999999999999999999999999999 99999999999853          23457888775

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=98.97  E-value=2.3e-10  Score=89.79  Aligned_cols=50  Identities=12%  Similarity=-0.044  Sum_probs=45.8

Q ss_pred             HHHHHHHHHHHHhhhhhhh-hhcCCccCCCCCccccCCCCcEEEeecCcceec
Q 026540            5 EKKLKRRAKRAVANISIRR-ASMGGIELPKPERCLDGIDMRCKVVDFGNACRA   56 (237)
Q Consensus         5 ~~~~~~~~~~~l~~l~~~~-~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~   56 (237)
                      +.++..++.|++.+|.++| ..+++||||||+|||++.  .++|+|||++...
T Consensus       169 ~~~~~~i~~qi~~~l~~lH~~~givHrDlkp~NILl~~--~~~liDFG~a~~~  219 (258)
T 1zth_A          169 ELDVEGIFNDVVENVKRLYQEAELVHADLSEYNIMYID--KVYFIDMGQAVTL  219 (258)
T ss_dssp             GSCHHHHHHHHHHHHHHHHHTSCEECSSCSTTSEEESS--SEEECCCTTCEET
T ss_pred             hHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEEcC--cEEEEECcccccC
Confidence            4477899999999999999 999999999999999998  8999999998654

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=98.40  E-value=1.1e-07  Score=78.41  Aligned_cols=49  Identities=8%  Similarity=-0.224  Sum_probs=43.1

Q ss_pred             HHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCC----------cEEEeecCccee
Q 026540            7 KLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDM----------RCKVVDFGNACR   55 (237)
Q Consensus         7 ~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~----------~~kl~dfg~~~~   55 (237)
                      ++..++.|++.+|.++|..+++||||||.|||++.++          .+.|+||+-+..
T Consensus       206 ~~~~l~~qll~~l~~lH~~gIVHrDLKp~NILl~~dgd~~d~~~~~~~~~iID~~Q~V~  264 (397)
T 4gyi_A          206 DPASLYADLIALILRLAKHGLIHGDFNEFNILIREEKDAEDPSSITLTPIIIXFPQMVS  264 (397)
T ss_dssp             CHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEEEEECSSCTTSEEEEEEECCCTTCEE
T ss_pred             HHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeCCCCcccccccccceEEEEeCCccc
Confidence            4567899999999999999999999999999998766          488999996644

>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A

Probab=96.94  E-value=0.00046  Score=54.91  Aligned_cols=78  Identities=17%  Similarity=0.163  Sum_probs=47.4

Q ss_pred             cCCccCCCCCccccCC--CCcEEEeecCcceecCcCcccCcCCCcc---cchHHhh----hcCC----------Cchhhh
Q 026540           26 MGGIELPKPERCLDGI--DMRCKVVDFGNACRANKQFAEEIQTRQY---RAPEVIL----RAGY----------SFSVDM   86 (237)
Q Consensus        26 ~~~h~d~kp~Nili~~--~~~~kl~dfg~~~~~~~~~~~~~~~~~~---~~PE~~~----~~~~----------~~~~di   86 (237)
                      ..+|+|++|.||+++.  +..+.++||+.+.... +..........   ..++...    ..+.          ..-.+.
T Consensus       192 ~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~-~~~Dl~~~~~~~~~~~~~~~~~~l~~Y~~~~~~~~~~r~~~~~~~  270 (304)
T 3sg8_A          192 CLIHNDFSSDHILFDTEKNTICGIIDFGDAAISD-PDNDFISLMEDDEEYGMEFVSKILNHYKHKDIPTVLEKYRMKEKY  270 (304)
T ss_dssp             EEECSCCCGGGEEEETTTTEEEEECCCTTCEEEC-TTHHHHTTCCTTTSCCHHHHHHHHHHHTCSCHHHHHHHHHHHHHH
T ss_pred             eeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCC-hHHHHHHHHhhccccCHHHHHHHHHHcCCCCcHHHHHHHHHHHHH
Confidence            4579999999999988  5678899999875321 11110000011   1222211    1111          112578


Q ss_pred             hhhhhHHHHHhcCCcccC
Q 026540           87 WSFACTAFELATGDMLFA  104 (237)
Q Consensus        87 ws~g~~l~~~~~g~~~f~  104 (237)
                      |+++.+++.+.+|..+|.
T Consensus       271 ~~l~~~~~~~~~g~~~~~  288 (304)
T 3sg8_A          271 WSFEKIIYGKEYGYMDWY  288 (304)
T ss_dssp             HHHHHHHHHHHTTCHHHH
T ss_pred             HHHHHHHHHHHcCCHHHH
Confidence            999999999999987664

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=96.79  E-value=0.00056  Score=52.71  Aligned_cols=28  Identities=7%  Similarity=-0.190  Sum_probs=24.5

Q ss_pred             CCccCCCCCccccCCCCcEEEeecCcce
Q 026540           27 GGIELPKPERCLDGIDMRCKVVDFGNAC   54 (237)
Q Consensus        27 ~~h~d~kp~Nili~~~~~~kl~dfg~~~   54 (237)
                      .+|+|++|.||+++.++.+.++||+.+.
T Consensus       186 l~HgDl~~~Nil~~~~~~~~liD~~~a~  213 (264)
T 1nd4_A          186 VTHGDACLPNIMVENGRFSGFIDCGRLG  213 (264)
T ss_dssp             EECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred             EECCCCCCCcEEEECCcEEEEEcchhcc
Confidence            7899999999999877667899999763

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=96.69  E-value=0.0012  Score=53.76  Aligned_cols=30  Identities=7%  Similarity=-0.188  Sum_probs=24.9

Q ss_pred             hcCCccCCCCCccccCCCC--cEEEeecCcce
Q 026540           25 SMGGIELPKPERCLDGIDM--RCKVVDFGNAC   54 (237)
Q Consensus        25 ~~~~h~d~kp~Nili~~~~--~~kl~dfg~~~   54 (237)
                      ..++|+|+++.||+++.++  .+.|+||+.+.
T Consensus       216 ~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~  247 (359)
T 3dxp_A          216 TSIVHGDYRLDNLMFHPTEPRVLAVLDWELST  247 (359)
T ss_dssp             CEEECSSCSGGGEEECSSSSCEEEECCCTTCE
T ss_pred             ceEEeCCCCCCcEEEeCCCCcEEEEECccccc
Confidence            3578999999999998764  36899999874

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=96.48  E-value=0.0015  Score=50.52  Aligned_cols=29  Identities=7%  Similarity=-0.103  Sum_probs=24.3

Q ss_pred             hcCCccCCCCCccccCCCCcEEEeecCcc
Q 026540           25 SMGGIELPKPERCLDGIDMRCKVVDFGNA   53 (237)
Q Consensus        25 ~~~~h~d~kp~Nili~~~~~~kl~dfg~~   53 (237)
                      ...+|+|++|.||+++.+..+.|+||+.+
T Consensus       183 ~~l~HgDl~~~Nil~~~~~~~~lIDwe~a  211 (263)
T 3tm0_A          183 LVFSHGDLGDSNIFVKDGKVSGFIDLGRS  211 (263)
T ss_dssp             EEEECSSCCTTSEEEETTEEEEECCCTTC
T ss_pred             ceEECCCCCcCcEEEECCcEEEEEEchhc
Confidence            44679999999999987666789999865

>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A

Probab=96.43  E-value=0.008  Score=45.26  Aligned_cols=87  Identities=6%  Similarity=-0.121  Sum_probs=53.0

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCC-ccCCCCCccccCCCCcEEEeecCcceecCcCcccCcCCCcccchHHhhhcCCC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGG-IELPKPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYS   81 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~-h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~   81 (237)
                      |+|.+|=.++.|+..+|+-.....-. .+-+-|..|++..+|.|.+.+ ..+.         .....+.+||... ...+
T Consensus        46 lsEEqaWALc~Qc~~~L~~~~~~~~~~~~i~~~~~i~l~~dG~V~f~~-~~s~---------~~~~~~~~pe~~~-~~~t  114 (229)
T 2yle_A           46 INEEQAWAVCYQCCGSLRAAARRRQPRHRVRSAAQIRVWRDGAVTLAP-AADD---------AGEPPPVAGKLGY-SQCM  114 (229)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCSGGGEEEETTSCEEECC-C---------------------CCSS-SSSC
T ss_pred             cCHHHHHHHHHHHHHHHHhhhhcccCCceecCCcceEEecCCceeccc-cccc---------ccccCCCChhhcc-ccch
Confidence            78999999999999999887321111 122256788888888777764 2110         0122345666542 2345


Q ss_pred             chhhhhhhhhHHHHHhcCC
Q 026540           82 FSVDMWSFACTAFELATGD  100 (237)
Q Consensus        82 ~~~diws~g~~l~~~~~g~  100 (237)
                      .+.-|+|+|+++|..+--.
T Consensus       115 e~~~IysLG~tLY~ALDyg  133 (229)
T 2yle_A          115 ETEVIESLGIIIYKALDYG  133 (229)
T ss_dssp             HHHHHHHHHHHHHHHHTTT
T ss_pred             HHHHHHHHHHHHHHHhhcC
Confidence            7788999999999888643

>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}

Probab=93.93  E-value=0.045  Score=43.68  Aligned_cols=30  Identities=13%  Similarity=-0.028  Sum_probs=26.2

Q ss_pred             hcCCccCCCCCccccCCCCcEEEeecCcce
Q 026540           25 SMGGIELPKPERCLDGIDMRCKVVDFGNAC   54 (237)
Q Consensus        25 ~~~~h~d~kp~Nili~~~~~~kl~dfg~~~   54 (237)
                      ...+|+|+.+.||+++.++.+.++||+.+.
T Consensus       222 ~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~  251 (346)
T 2q83_A          222 PNLCHQDYGTGNTLLGENEQIWVIDLDTVS  251 (346)
T ss_dssp             CCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred             CceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence            567899999999999888889999999653

>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*

Probab=92.44  E-value=0.11  Score=41.13  Aligned_cols=29  Identities=21%  Similarity=0.288  Sum_probs=23.7

Q ss_pred             cCCccCCCCCccccCC---CCc-EEEeecCcce
Q 026540           26 MGGIELPKPERCLDGI---DMR-CKVVDFGNAC   54 (237)
Q Consensus        26 ~~~h~d~kp~Nili~~---~~~-~kl~dfg~~~   54 (237)
                      ..+|+|+.+.||+++.   ++. +.|+||+.+.
T Consensus       191 ~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~  223 (306)
T 3tdw_A          191 RLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAA  223 (306)
T ss_dssp             EEECSCCSGGGEEECTTCSSCCEEEECCCTTCE
T ss_pred             eeEeCCCCcccEEEecCCCCCceEEEEehhhcC
Confidence            4579999999999987   344 5899999764

>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}

Probab=92.15  E-value=0.1  Score=43.30  Aligned_cols=31  Identities=16%  Similarity=-0.071  Sum_probs=26.6

Q ss_pred             hhhcCCccCCCCCccccCCCCcEEEeecCcce
Q 026540           23 RASMGGIELPKPERCLDGIDMRCKVVDFGNAC   54 (237)
Q Consensus        23 ~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~   54 (237)
                      +....+|+|+++.||+++.++ +.++||+.+.
T Consensus       230 ~~~~liHGDl~~~Nil~~~~~-~~lID~e~a~  260 (420)
T 2pyw_A          230 RAQALIHGDLHTGSVMVTQDS-TQVIDPEFSF  260 (420)
T ss_dssp             BCCEEECSCCSGGGEEECSSC-EEECCCTTCE
T ss_pred             CCCeEEecCCCCCcEEEeCCC-CEEEeCcccc
Confidence            456678999999999998876 9999998764

>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}

Probab=87.70  E-value=0.37  Score=38.35  Aligned_cols=31  Identities=19%  Similarity=-0.002  Sum_probs=26.0

Q ss_pred             hhcCCccCCCCCccccCCC----CcEEEeecCcce
Q 026540           24 ASMGGIELPKPERCLDGID----MRCKVVDFGNAC   54 (237)
Q Consensus        24 ~~~~~h~d~kp~Nili~~~----~~~kl~dfg~~~   54 (237)
                      ....+|+|+.+.||+++.+    +.+.++||+.+.
T Consensus       182 ~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~  216 (333)
T 3csv_A          182 DMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAK  216 (333)
T ss_dssp             CCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCE
T ss_pred             CCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcC
Confidence            3467899999999999874    678999999764

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=87.57  E-value=0.2  Score=38.50  Aligned_cols=28  Identities=7%  Similarity=-0.109  Sum_probs=24.4

Q ss_pred             cCCccCCCCCccccCCCCcEEEeecCcc
Q 026540           26 MGGIELPKPERCLDGIDMRCKVVDFGNA   53 (237)
Q Consensus        26 ~~~h~d~kp~Nili~~~~~~kl~dfg~~   53 (237)
                      ..+|.|+.+.||+++.++.+-|+||+.+
T Consensus       194 ~l~HGDl~~~Nil~~~~~~~~viDwe~a  221 (272)
T 4gkh_A          194 VVTHGDFSLDNLIFDEGKLIGCIDVGRV  221 (272)
T ss_dssp             EEECSCCCTTSEEEETTEEEEECCCTTC
T ss_pred             EEEcCCCCCCeEEEECCeEEEEEECccc
Confidence            4579999999999998877789999865

>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*

Probab=86.96  E-value=0.31  Score=39.22  Aligned_cols=31  Identities=10%  Similarity=-0.126  Sum_probs=25.5

Q ss_pred             hhcCCccCCCCCccccCCCCcEEEeecCcce
Q 026540           24 ASMGGIELPKPERCLDGIDMRCKVVDFGNAC   54 (237)
Q Consensus        24 ~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~   54 (237)
                      ....+|+|+.+.||+++.+..+.|+||+.+.
T Consensus       221 ~~~l~HgDl~~~Nil~~~~~~~~vIDwe~a~  251 (357)
T 3ats_A          221 EPVLLWGDARVGNVLYRDFQPVAVLDWEMVA  251 (357)
T ss_dssp             CCEEECSSCSGGGEEEETTEEEEECCGGGCE
T ss_pred             CceEEeCCCCCCeEEEeCCcEEEEEcccccc
Confidence            3567899999999999865567899998764

>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6

Probab=86.37  E-value=0.18  Score=39.90  Aligned_cols=30  Identities=17%  Similarity=-0.083  Sum_probs=25.3

Q ss_pred             hcCCccCCCCCccccCCCCcEEEeecCcce
Q 026540           25 SMGGIELPKPERCLDGIDMRCKVVDFGNAC   54 (237)
Q Consensus        25 ~~~~h~d~kp~Nili~~~~~~kl~dfg~~~   54 (237)
                      ...+|+|+.+.||+++.+..+.++||+.+.
T Consensus       187 ~~liHgDl~~~Nil~~~~~~~~lIDf~~a~  216 (322)
T 2ppq_A          187 AGVIHADLFQDNVFFLGDELSGLIDFYFAC  216 (322)
T ss_dssp             EEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred             cccCCCCCCccCEEEeCCceEEEecchhcc
Confidence            466899999999999887666899998653

>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6

Probab=85.17  E-value=0.66  Score=36.69  Aligned_cols=27  Identities=19%  Similarity=-0.028  Sum_probs=23.2

Q ss_pred             hcCCccCCCCCccccCCCCcEEEeecCcc
Q 026540           25 SMGGIELPKPERCLDGIDMRCKVVDFGNA   53 (237)
Q Consensus        25 ~~~~h~d~kp~Nili~~~~~~kl~dfg~~   53 (237)
                      ...+|+|+++.||+++ + .+.++||+.+
T Consensus       195 ~~l~HgD~~~~Nil~~-~-~~~lIDfe~a  221 (328)
T 1zyl_A          195 VLRLHGDCHAGNILWR-D-GPMFVDLDDA  221 (328)
T ss_dssp             CEECCSSCSGGGEEES-S-SEEECCCTTC
T ss_pred             eeeeeCCCCcccEeEc-C-CCEEEECCCC
Confidence            4567999999999998 4 7899999865

>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*

Probab=81.72  E-value=1.2  Score=35.93  Aligned_cols=29  Identities=7%  Similarity=0.020  Sum_probs=23.4

Q ss_pred             hcCCccCCCCCccccCCCCcEEEeecCcce
Q 026540           25 SMGGIELPKPERCLDGIDMRCKVVDFGNAC   54 (237)
Q Consensus        25 ~~~~h~d~kp~Nili~~~~~~kl~dfg~~~   54 (237)
                      ...+|.|+.+.|||++.+. +.++||..+.
T Consensus       212 ~~l~HgDl~~~Nil~~~~~-~~lID~e~a~  240 (369)
T 3c5i_A          212 IVFCHNDLQENNIINTNKC-LRLIDFEYSG  240 (369)
T ss_dssp             EEEECSCCCGGGEEECC-C-EEECCCTTCE
T ss_pred             eEEEeCCCCcccEEecCCc-EEEEEecCCC
Confidence            4567999999999998655 8999998663

>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*

Probab=80.58  E-value=0.88  Score=36.45  Aligned_cols=30  Identities=10%  Similarity=0.027  Sum_probs=25.9

Q ss_pred             hcCCccCCCCCccccCCCCcEEEeecCcce
Q 026540           25 SMGGIELPKPERCLDGIDMRCKVVDFGNAC   54 (237)
Q Consensus        25 ~~~~h~d~kp~Nili~~~~~~kl~dfg~~~   54 (237)
                      ...+|.|+.+.||+++.++.+.++||+.+.
T Consensus       206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~  235 (339)
T 3i1a_A          206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPM  235 (339)
T ss_dssp             CEEECSCCCGGGEEECGGGCEEECCCSSCE
T ss_pred             ceeEeCCCCcCCEEEeCCCeEEEEECCCCe
Confidence            456799999999999987889999998654

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	237
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	7e-39
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	6e-27
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	2e-23
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	3e-22
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	1e-21
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	3e-21
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	4e-21
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	6e-21
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	1e-20
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	1e-20
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	1e-20
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	5e-20
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	2e-19
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	2e-19
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	5e-19
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	2e-18
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	1e-17
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	2e-17
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	2e-17
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	5e-17
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	4e-16
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	3e-15
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	5e-15
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	6e-15
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	1e-14
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	1e-14
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	2e-14
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	2e-14
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	4e-14
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	9e-14
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	3e-13
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	3e-13
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	5e-13
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	1e-12
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	2e-11
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	7e-11
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	3e-10
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	3e-10
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	4e-10
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	6e-10
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	6e-10
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	8e-10
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	1e-09
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	3e-09
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	4e-09
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	1e-08
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	2e-08
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	4e-08
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	8e-08
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	1e-07
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	2e-07
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	2e-07
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	3e-07
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	7e-07
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	9e-07
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	9e-07
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	1e-06
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	5e-06
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	5e-06
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	7e-06
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	1e-05
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	4e-05

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  135 bits (341), Expect = 7e-39
 Identities = 73/179 (40%), Positives = 111/179 (62%), Gaps = 6/179 (3%)

Query: 33  KPERCL------DGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDM 86
           KPE  L          ++ K+ D GNAC  ++ +   IQTR+YR+PEV+L A +    D+
Sbjct: 153 KPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADI 212

Query: 87  WSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRH 146
           WS AC  FEL TGD LF P  G  + +D+DH+A ++EL+G++P  +   G  ++ +F+  
Sbjct: 213 WSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSR 272

Query: 147 GDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 205
           G L+ I +LKFW L+ +L +KY+FS+ +A+E ++FL P+L   P KR  A   + HPWL
Sbjct: 273 GLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWL 331

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  103 bits (258), Expect = 6e-27
 Identities = 39/196 (19%), Positives = 66/196 (33%), Gaps = 18/196 (9%)

Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFA-EEIQTRQYRAPEVILRAGYSFSVDMWSFAC 91
           KP   L       K+ DFG + +     A   + TR Y +PE +    YS   D+WS   
Sbjct: 132 KPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGL 191

Query: 92  TAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKR 151
           +  E+A G     P         E  L    ++ G             +       D + 
Sbjct: 192 SLVEMAVGRYPIPPPD-----AKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRP 246

Query: 152 IRRLKFWSLDRLLVDKYRF-SETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNS 210
              +       +     +  S   + EF +F+   L   P +R   +Q + H ++     
Sbjct: 247 PMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIK---- 302

Query: 211 TRDETKNKSNVEKVDV 226
                  +S+ E+VD 
Sbjct: 303 -------RSDAEEVDF 311

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 93.8 bits (232), Expect = 2e-23
 Identities = 44/178 (24%), Positives = 61/178 (34%), Gaps = 24/178 (13%)

Query: 33  KPERCLDGIDMRCKVVDFGNACRAN---KQFAEEIQTRQYRAPEVILRA-GYSFSVDMWS 88
           KP   L   +   K+ DFG A       + +  ++ TR YRAPE++  A  Y   VDMW+
Sbjct: 127 KPNNLLLDENGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWA 186

Query: 89  FACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGD 148
             C   EL          S      D D L  + E +G    +         DY      
Sbjct: 187 VGCILAELLLRVPFLPGDS------DLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSF 240

Query: 149 LKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLS 206
                   F +    L+D               +  L  F P  R TA Q L+  + S
Sbjct: 241 PGIPLHHIFSAAGDDLLD--------------LIQGLFLFNPCARITATQALKMKYFS 284

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 91.5 bits (226), Expect = 3e-22
 Identities = 43/176 (24%), Positives = 69/176 (39%), Gaps = 8/176 (4%)

Query: 33  KPERCLDGIDMRCKVVDFGNA--CRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFA 90
           KP   +   D   K++DFG A     +      + TR YRAPEVIL  GY  +VD+WS  
Sbjct: 146 KPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 205

Query: 91  CTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLK 150
           C   E+    +LF  +         D    ++E +G    +       +   +  +    
Sbjct: 206 CIMGEMVRHKILFPGRD------YIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKY 259

Query: 151 RIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLS 206
                     D L       ++  A +  + L  +L   P KR +    LQHP+++
Sbjct: 260 AGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 315

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 88.8 bits (219), Expect = 1e-21
 Identities = 42/175 (24%), Positives = 63/175 (36%), Gaps = 23/175 (13%)

Query: 33  KPERCLDGIDMRCKVVDFG--NACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFA 90
           KP+  L     + K+ DFG              + T  YRAPEV+L++ Y+  VD+WS  
Sbjct: 143 KPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVG 202

Query: 91  CTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLK 150
           C   E+     LF   S      D D L  ++++IG    +                  +
Sbjct: 203 CIFAEMFRRKPLFRGSS------DVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQ 256

Query: 151 RIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 205
            I                +F         + L+  L F P KR +A   L HP+ 
Sbjct: 257 PIE---------------KFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYF 296

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 87.6 bits (216), Expect = 3e-21
 Identities = 45/178 (25%), Positives = 66/178 (37%), Gaps = 23/178 (12%)

Query: 33  KPERCLDGIDMRCKVVDFGNACRAN---KQFAEEIQTRQYRAPEVILRAGY-SFSVDMWS 88
           KP+  L   +   K+ DFG A       + +  E+ T  YRAPE++L   Y S +VD+WS
Sbjct: 129 KPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWS 188

Query: 89  FACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGD 148
             C   E+ T   LF   S      + D L  +   +G     +  G     DY      
Sbjct: 189 LGCIFAEMVTRRALFPGDS------EIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPK 242

Query: 149 LKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLS 206
             R    K                    +    L  +L + P KR +A+  L HP+  
Sbjct: 243 WARQDFSKVVP-------------PLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 287

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 88.0 bits (217), Expect = 4e-21
 Identities = 53/204 (25%), Positives = 81/204 (39%), Gaps = 19/204 (9%)

Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAG-YSFSVDMWSFAC 91
           KP       D   K++DFG A +A+ +    + TR YRAPEVIL    Y+ +VD+WS  C
Sbjct: 148 KPGNLAVNEDCELKILDFGLARQADSEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGC 207

Query: 92  TAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKR 151
              E+ TG  LF            D L  +M++ G  P +        +      G  + 
Sbjct: 208 IMAEMITGKTLFKGSD------HLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPEL 261

Query: 152 IRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL-SLRNS 210
            ++           D        +      L  +L    E+R TA + L HP+  SL ++
Sbjct: 262 EKK-----------DFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLHDT 310

Query: 211 TRDETKNKSNVEKVDVGMSKLEIK 234
             +    K +    DV  +  E K
Sbjct: 311 EDEPQVQKYDDSFDDVDRTLDEWK 334

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 86.5 bits (213), Expect = 6e-21
 Identities = 43/178 (24%), Positives = 69/178 (38%), Gaps = 23/178 (12%)

Query: 32  PKPERCLDGIDMRCKVVDFGNACRANK---QFAEEIQTRQYRAPEVILRAG-YSFSVDMW 87
            KP+  L   +   K+ DFG A        ++  EI T  YRAP+V++ +  YS ++D+W
Sbjct: 126 LKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIW 185

Query: 88  SFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHG 147
           S  C   E+  G  LF   S      + D L  +  ++G    K      +   Y     
Sbjct: 186 SVGCIFAEMVNGTPLFPGVS------EADQLMRIFRILGTPNSKNWPNVTELPKYDPNFT 239

Query: 148 DLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 205
             + +    F              E       + L  +L   P +R TA+Q L+H + 
Sbjct: 240 VYEPLPWESFLK---------GLDE----SGIDLLSKMLKLDPNQRITAKQALEHAYF 284

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 86.9 bits (214), Expect = 1e-20
 Identities = 47/183 (25%), Positives = 77/183 (42%), Gaps = 18/183 (9%)

Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAG-YSFSVDMWSFAC 91
           KP       D   K++DFG A   + +    + TR YRAPE++L    Y+ +VD+WS  C
Sbjct: 148 KPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 207

Query: 92  TAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKR 151
              EL TG  LF            D L L++ L+G    ++ +    S+   +    L +
Sbjct: 208 IMAELLTGRTLFPGTD------HIDQLKLILRLVGTPGAEL-LKKISSESARNYIQSLTQ 260

Query: 152 IRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNST 211
           + ++ F ++                   + L  +L    +KR TA Q L H + +  +  
Sbjct: 261 MPKMNFANVFIGANP----------LAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 310

Query: 212 RDE 214
            DE
Sbjct: 311 DDE 313

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 85.4 bits (211), Expect = 1e-20
 Identities = 38/179 (21%), Positives = 60/179 (33%), Gaps = 49/179 (27%)

Query: 33  KPERCLDGIDMRCKVVDFGNACRA-NKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFAC 91
           KPE  L G     K+ DFG +  A + +      T  Y  PE+I    +   VD+WS   
Sbjct: 133 KPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGV 192

Query: 92  TAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKR 151
             +E   G   F   +               E                          KR
Sbjct: 193 LCYEFLVGKPPFEANT-------------YQET------------------------YKR 215

Query: 152 IRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNS 210
           I R+           ++ F +       + +  LL   P +RP  ++ L+HPW++  +S
Sbjct: 216 ISRV-----------EFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSS 263

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 86.1 bits (212), Expect = 1e-20
 Identities = 33/182 (18%), Positives = 62/182 (34%), Gaps = 24/182 (13%)

Query: 33  KPERCLDGIDMRCKVVDFGNA-------CRANKQFAEEIQTRQYRAPEVIL-RAGYSFSV 84
           K    L   D   K+ DFG A            ++   + T  YR PE++L    Y   +
Sbjct: 144 KAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPI 203

Query: 85  DMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFD 144
           D+W   C   E+ T   +    +      ++  LAL+ +L G +            + + 
Sbjct: 204 DLWGAGCIMAEMWTRSPIMQGNT------EQHQLALISQLCGSITP----------EVWP 247

Query: 145 RHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPW 204
              + +   +L+     +  V     +        + +  LL   P +R  +   L H +
Sbjct: 248 NVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDF 307

Query: 205 LS 206
             
Sbjct: 308 FW 309

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 84.2 bits (207), Expect = 5e-20
 Identities = 43/178 (24%), Positives = 70/178 (39%), Gaps = 22/178 (12%)

Query: 33  KPERCLDGIDMRCKVVDFGNACRA---NKQFAEEIQTRQYRAPEVILRAG-YSFSVDMWS 88
           KP+  L   +   K+ +FG A       + ++ E+ T  YR P+V+  A  YS S+DMWS
Sbjct: 128 KPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWS 187

Query: 89  FACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGD 148
             C   ELA       P +     + +D L  +  L+G    +      +  DY      
Sbjct: 188 AGCIFAELANAGRPLFPGN-----DVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMY 242

Query: 149 LKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLS 206
                 +             + +        + L  LL   P +R +A++ LQHP+ S
Sbjct: 243 PATTSLVNVVP---------KLNA----TGRDLLQNLLKCNPVQRISAEEALQHPYFS 287

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score = 83.4 bits (205), Expect = 2e-19
 Identities = 35/171 (20%), Positives = 73/171 (42%), Gaps = 13/171 (7%)

Query: 37  CLDGIDMRCKVVDFGNAC--RANKQFAEEIQTRQYRAPEVILRA-GYSFSVDMWSFACTA 93
            +D    + +++D+G A      +++   + +R ++ PE+++    Y +S+DMWS  C  
Sbjct: 161 MIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCML 220

Query: 94  FELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIR 153
             +      F         ++ D L  + +++G       I     +     +  L R  
Sbjct: 221 ASMIFRKEPFFHGH-----DNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHS 275

Query: 154 RLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPW 204
           R K W       +++  S     E  +FL  LL +  + R TA++ ++HP+
Sbjct: 276 R-KRWERFVHSENQHLVSP----EALDFLDKLLRYDHQSRLTAREAMEHPY 321

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 83.3 bits (205), Expect = 2e-19
 Identities = 45/178 (25%), Positives = 66/178 (37%), Gaps = 23/178 (12%)

Query: 33  KPER-CLDGIDMRCKVVDFGNA--CRANKQFAEEIQTRQYRAPEVILRA-GYSFSVDMWS 88
           KP+   LD      K+ DFG+A      +     I +R YRAPE+I  A  Y+ S+D+WS
Sbjct: 149 KPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWS 208

Query: 89  FACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGD 148
             C   EL  G  +F   S        D L  +++++G   R+                 
Sbjct: 209 AGCVLAELLLGQPIFPGDS------GVDQLVEIIKVLGTPTRE------------QIREM 250

Query: 149 LKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLS 206
                  KF  +      K     T   E       LL++TP  R T  +   H +  
Sbjct: 251 NPNYTEFKFPQIKAHPWTKVFRPRTPP-EAIALCSRLLEYTPTARLTPLEACAHSFFD 307

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 81.2 bits (200), Expect = 5e-19
 Identities = 40/176 (22%), Positives = 61/176 (34%), Gaps = 50/176 (28%)

Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFA---EEIQTRQYRAPEVILRAGYSFSVDMWSF 89
           KP           K+ DFG A   N   +     + T  Y +PE + R  Y+   D+WS 
Sbjct: 141 KPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSL 200

Query: 90  ACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDL 149
            C  +EL      F   S               EL GK+                R G  
Sbjct: 201 GCLLYELCALMPPFTAFS-------------QKELAGKI----------------REGKF 231

Query: 150 KRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 205
           +RI               YR+S+    E  E +  +L+     RP+ ++ L++P +
Sbjct: 232 RRI--------------PYRYSD----ELNEIITRMLNLKDYHRPSVEEILENPLI 269

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 79.3 bits (195), Expect = 2e-18
 Identities = 27/175 (15%), Positives = 53/175 (30%), Gaps = 48/175 (27%)

Query: 33  KPERCL-DGIDMRCKVVDFGNACRANKQFAEEIQ-TRQYRAPEVILRAGYSFSVDMWSFA 90
           K +     G     K+ D G A      FA+ +  T ++ APE+     Y  SVD+++F 
Sbjct: 141 KCDNIFITGPTGSVKIGDLGLATLKRASFAKAVIGTPEFMAPEM-YEEKYDESVDVYAFG 199

Query: 91  CTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLK 150
               E+AT +  +          +  + A +   +    +                    
Sbjct: 200 MCMLEMATSEYPY---------SECQNAAQIYRRVTSGVKPA------------------ 232

Query: 151 RIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 205
                              F +    E  E +   +    ++R + +  L H + 
Sbjct: 233 ------------------SFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFF 269

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 78.3 bits (192), Expect = 1e-17
 Identities = 47/180 (26%), Positives = 73/180 (40%), Gaps = 24/180 (13%)

Query: 33  KPERCLDGIDMRCKVVDFGNACRANK------QFAEEIQTRQYRAPEVILR-AGYSFSVD 85
           KP   L       K+ DFG A  A+          E + TR YRAPE++L   GY+ S+D
Sbjct: 136 KPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSID 195

Query: 86  MWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDR 145
           +WS  C   E+ +   +F  K         D L  ++ ++G             ++  + 
Sbjct: 196 IWSVGCILAEMLSNRPIFPGKH------YLDQLNHILGILGSPS----------QEDLNC 239

Query: 146 HGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 205
             +LK    L        +     F   D+ +  + L  +L F P KR   +Q L HP+L
Sbjct: 240 IINLKARNYLLSLPHKNKVPWNRLFPNADS-KALDLLDKMLTFNPHKRIEVEQALAHPYL 298

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 77.3 bits (190), Expect = 2e-17
 Identities = 33/182 (18%), Positives = 62/182 (34%), Gaps = 53/182 (29%)

Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAE---EIQTRQYRAPEVIL-----RAGYSFSV 84
           K    L  +D   K+ DFG + +  +        I T  + APEV++        Y +  
Sbjct: 137 KAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKA 196

Query: 85  DMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFD 144
           D+WS   T  E+A  +             + + + +++++                    
Sbjct: 197 DVWSLGITLIEMAEIEPPH---------HELNPMRVLLKIA------------------- 228

Query: 145 RHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPW 204
              +   + +   WS                  F +FL   L+   + R T  Q LQHP+
Sbjct: 229 -KSEPPTLAQPSRWS----------------SNFKDFLKKCLEKNVDARWTTSQLLQHPF 271

Query: 205 LS 206
           ++
Sbjct: 272 VT 273

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 77.3 bits (190), Expect = 2e-17
 Identities = 39/186 (20%), Positives = 66/186 (35%), Gaps = 48/186 (25%)

Query: 33  KPERCLDGIDMRCKVVDFGNACRA---NKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSF 89
           K +  L G+D   K+ DFG   +      + +  + T  + APEV+ R  Y   VD+WS 
Sbjct: 143 KSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSL 202

Query: 90  ACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDL 149
              A E+  G+  +          +E+ L  +  +      ++                 
Sbjct: 203 GIMAIEMIEGEPPY---------LNENPLRALYLIATNGTPEL----------------- 236

Query: 150 KRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRN 209
                              +  E  +  F +FL   LD   EKR +A++ LQH +L +  
Sbjct: 237 -------------------QNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLKIAK 277

Query: 210 STRDET 215
                T
Sbjct: 278 PLSSLT 283

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 76.7 bits (188), Expect = 5e-17
 Identities = 36/188 (19%), Positives = 61/188 (32%), Gaps = 48/188 (25%)

Query: 33  KPERCL--DGIDMRCKVVDFGNACRAN--KQFAEEIQTRQYRAPEVILRAGYSFSVDMWS 88
           KPE  +         K++DFG     +  +       T ++ APEV       +  DMWS
Sbjct: 151 KPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWS 210

Query: 89  FACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGD 148
               ++ L +G   F  ++      D++ L  +      M                    
Sbjct: 211 VGVLSYILLSGLSPFGGEN------DDETLRNVKSCDWNMDDSA---------------- 248

Query: 149 LKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLR 208
                     S                 +  +F+  LL   P  R T  Q L+HPWL+  
Sbjct: 249 ------FSGIS----------------EDGKDFIRKLLLADPNTRMTIHQALEHPWLTPG 286

Query: 209 NSTRDETK 216
           N+   +++
Sbjct: 287 NAPGRDSQ 294

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.3 bits (179), Expect = 4e-16
 Identities = 37/176 (21%), Positives = 64/176 (36%), Gaps = 46/176 (26%)

Query: 39  DGIDMRCKVVDFGNACRAN--KQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFEL 96
           +    R K++DFG A + +   +F     T ++ APE++         DMWS     + L
Sbjct: 150 NVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYIL 209

Query: 97  ATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLK 156
            +G   F   +       ++ LA +  +  +   +                         
Sbjct: 210 LSGASPFLGDT------KQETLANVSAVNYEFEDEY------------------------ 239

Query: 157 FWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNSTR 212
                        FS T A    +F+  LL   P+KR T Q  LQHPW+  +++ +
Sbjct: 240 -------------FSNTSA-LAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQ 281

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.7 bits (175), Expect = 3e-15
 Identities = 39/178 (21%), Positives = 58/178 (32%), Gaps = 45/178 (25%)

Query: 33  KPERCL---DGIDMRCKVVDFGNACRA--NKQFAEEIQTRQYRAPEVILRAGYSFSVDMW 87
           KPE  L      +   K+ DFG A     +        T  Y APEV+    Y  S DMW
Sbjct: 138 KPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMW 197

Query: 88  SFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHG 147
           S     + L  G   F    G             + +   M  +I               
Sbjct: 198 SLGVIMYILLCGYPPFYSNHG-------------LAISPGMKTRI--------------- 229

Query: 148 DLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 205
              R+ + +F + +   V +         E    +  LL   P +R T  + + HPW+
Sbjct: 230 ---RMGQYEFPNPEWSEVSE---------EVKMLIRNLLKTEPTQRMTITEFMNHPWI 275

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 70.9 bits (173), Expect = 5e-15
 Identities = 38/185 (20%), Positives = 57/185 (30%), Gaps = 46/185 (24%)

Query: 42  DMRCKVVDFGNACRANKQ--FAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATG 99
               K++DFG A + N          T ++ APE++ R    F  DMW+     + L +G
Sbjct: 165 ASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSG 224

Query: 100 DMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWS 159
              FA +       D + L  +     +                               S
Sbjct: 225 LSPFAGED------DLETLQNVKRCDWEFDEDA----------------------FSSVS 256

Query: 160 LDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNSTRDETKNKS 219
                            E  +F+  LL   P KR T    L+HPWL   +S        S
Sbjct: 257 ----------------PEAKDFIKNLLQKEPRKRLTVHDALEHPWLKGDHSNLTSRIPSS 300

Query: 220 NVEKV 224
              K+
Sbjct: 301 RYNKI 305

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 70.0 bits (171), Expect = 6e-15
 Identities = 30/180 (16%), Positives = 48/180 (26%), Gaps = 51/180 (28%)

Query: 33  KPERCLDGIDMRCKVVDFGNACRA-----NKQFAEEIQTRQYRAPEVILRAGY-SFSVDM 86
           KPE  L       K+ DFG A         +   +   T  Y APE++ R  + +  VD+
Sbjct: 130 KPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDV 189

Query: 87  WSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRH 146
           WS       +  G++         + +  D      +   K                   
Sbjct: 190 WSCGIVLTAMLAGEL--------PWDQPSDSCQEYSDWKEKKT----------------- 224

Query: 147 GDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLS 206
                   L  W          +            L  +L   P  R T     +  W +
Sbjct: 225 -------YLNPWK---------KIDS----APLALLHKILVENPSARITIPDIKKDRWYN 264

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 69.7 bits (170), Expect = 1e-14
 Identities = 44/199 (22%), Positives = 75/199 (37%), Gaps = 47/199 (23%)

Query: 38  LDGIDMRCKVVDFGNACRA--NKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFE 95
               D +  + DFG +         +    T  Y APEV+ +  YS +VD WS    A+ 
Sbjct: 142 SLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYI 201

Query: 96  LATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRL 155
           L  G   F           +++ A + E I K   +                        
Sbjct: 202 LLCGYPPF----------YDENDAKLFEQILKAEYEF---------------------DS 230

Query: 156 KFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNSTRDET 215
            +W            S+       +F+  L++  PEKR T +Q LQHPW++  ++  D+ 
Sbjct: 231 PYWD---------DISD----SAKDFIRHLMEKDPEKRFTCEQALQHPWIA-GDTALDKN 276

Query: 216 KNKSNVEKVDVGMSKLEIK 234
            ++S  E++    +K + K
Sbjct: 277 IHQSVSEQIKKNFAKSKWK 295

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 69.4 bits (169), Expect = 1e-14
 Identities = 37/179 (20%), Positives = 52/179 (29%), Gaps = 52/179 (29%)

Query: 32  PKPERCLDGIDMRCKVVDFGNA---CRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWS 88
            K +  L   D   K+ DFG        + +      T  Y APE++L   Y+ SVD WS
Sbjct: 129 LKLDNILLDKDGHIKIADFGMCKENMLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWS 188

Query: 89  FACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGD 148
           F    +E+  G   F           +D   L                            
Sbjct: 189 FGVLLYEMLIGQSPF---------HGQDEEEL---------------------------- 211

Query: 149 LKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTA-QQCLQHPWLS 206
                         + +D   +     +E  + LV L    PEKR        QHP   
Sbjct: 212 -----------FHSIRMDNPFYPRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFR 259

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 68.9 bits (168), Expect = 2e-14
 Identities = 41/181 (22%), Positives = 59/181 (32%), Gaps = 52/181 (28%)

Query: 33  KPERCLDGIDMRCKVVDFGNACRAN--KQFAEEIQTRQYRAPEVIL------RAGYSFSV 84
           KPE  L   DM  K+ DFG +C+ +  ++  E   T  Y APE+I         GY   V
Sbjct: 137 KPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEV 196

Query: 85  DMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFD 144
           DMWS     + L  G   F                LM+ +I     +             
Sbjct: 197 DMWSTGVIMYTLLAGSPPF----------WHRKQMLMLRMIMSGNYQF------------ 234

Query: 145 RHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPW 204
                        +S                    + +   L   P+KR TA++ L HP+
Sbjct: 235 ------GSPEWDDYS----------------DTVKDLVSRFLVVQPQKRYTAEEALAHPF 272

Query: 205 L 205
            
Sbjct: 273 F 273

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 68.9 bits (168), Expect = 2e-14
 Identities = 34/205 (16%), Positives = 58/205 (28%), Gaps = 50/205 (24%)

Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVIL---RAGYSFSVDMWSF 89
           K    L       K+ DFG+A          + T  + APEVIL      Y   VD+WS 
Sbjct: 142 KAGNILLSEPGLVKLGDFGSASIMAPAN-SFVGTPYWMAPEVILAMDEGQYDGKVDVWSL 200

Query: 90  ACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDL 149
             T  ELA                + + ++ +  +       +                 
Sbjct: 201 GITCIELAERKPPL---------FNMNAMSALYHIAQNESPAL----------------- 234

Query: 150 KRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRN 209
                                S   +  F  F+   L   P+ RPT++  L+H ++    
Sbjct: 235 --------------------QSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRER 274

Query: 210 STRDETKNKSNVEKVDVGMSKLEIK 234
                       +     +  L+ +
Sbjct: 275 PPTVIMDLIQRTKDAVRELDNLQYR 299

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.7 bits (165), Expect = 4e-14
 Identities = 33/185 (17%), Positives = 56/185 (30%), Gaps = 59/185 (31%)

Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQT-----RQYRAPEVILRAGYSFSVDMW 87
           KPE  L   DM  ++ DFG A   + +  +          QY +PE++       S D+W
Sbjct: 135 KPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLW 194

Query: 88  SFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHG 147
           +  C  ++L  G   F             +  L+ + I K+                   
Sbjct: 195 ALGCIIYQLVAGLPPF----------RAGNEYLIFQKIIKL------------------- 225

Query: 148 DLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQC------LQ 201
                              +Y F E    +  + +  LL     KR   ++         
Sbjct: 226 -------------------EYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKA 266

Query: 202 HPWLS 206
           HP+  
Sbjct: 267 HPFFE 271

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.0 bits (163), Expect = 9e-14
 Identities = 34/166 (20%), Positives = 53/166 (31%), Gaps = 46/166 (27%)

Query: 42  DMRCKVVDFGNA--CRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACTAFELATG 99
               K+++FG A   +    F       +Y APEV      S + DMWS     + L +G
Sbjct: 140 SSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSG 199

Query: 100 DMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWS 159
              F  ++      ++  +  +M        +                        K  S
Sbjct: 200 INPFLAET------NQQIIENIMNAEYTFDEEA----------------------FKEIS 231

Query: 160 LDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 205
                            E  +F+  LL    + R TA + LQHPWL
Sbjct: 232 ----------------IEAMDFVDRLLVKERKSRMTASEALQHPWL 261

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.4 bits (159), Expect = 3e-13
 Identities = 33/185 (17%), Positives = 61/185 (32%), Gaps = 50/185 (27%)

Query: 33  KPERCLDGIDMRCKVVDFGNACRANK-----QFAEEIQTRQYRAPEVIL---RAGYSFSV 84
           K        D+  K+ DFG A   ++     QF +   +  + APEVI    +  YSF  
Sbjct: 131 KSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQS 190

Query: 85  DMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFD 144
           D+++F    +EL TG + +          + ++   ++ ++G+                 
Sbjct: 191 DVYAFGIVLYELMTGQLPY---------SNINNRDQIIFMVGR----------------- 224

Query: 145 RHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPW 204
                             L  D  +      +     +   L    ++RP   Q L    
Sbjct: 225 ----------------GYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIE 268

Query: 205 LSLRN 209
           L  R+
Sbjct: 269 LLARS 273

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.1 bits (158), Expect = 3e-13
 Identities = 28/170 (16%), Positives = 48/170 (28%), Gaps = 56/170 (32%)

Query: 38  LDGIDMRCKVVDFGNACRANKQFAEEIQ-TRQYRAPEVILRAGY-SFSVDMWSFACTAFE 95
           +D      K++DFG+          +   TR Y  PE I    Y   S  +WS     ++
Sbjct: 143 IDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYD 202

Query: 96  LATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRL 155
           +                             G +P                          
Sbjct: 203 MVC---------------------------GDIP-------------------------- 209

Query: 156 KFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL 205
            F   + ++  +  F +  + E    +   L   P  RPT ++   HPW+
Sbjct: 210 -FEHDEEIIRGQVFFRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWM 258

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.3 bits (156), Expect = 5e-13
 Identities = 23/170 (13%), Positives = 41/170 (24%), Gaps = 46/170 (27%)

Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACT 92
                L   D   KV DFG    A+          ++ APE +    +S   D+WSF   
Sbjct: 130 AARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGIL 189

Query: 93  AFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRI 152
            +E+ +   +               L  ++  + K  +                      
Sbjct: 190 LWEIYSFGRVP---------YPRIPLKDVVPRVEKGYK---------------------- 218

Query: 153 RRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQH 202
                              +       E +          RP+  Q  + 
Sbjct: 219 ---------------MDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQ 253

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 64.0 bits (155), Expect = 1e-12
 Identities = 34/179 (18%), Positives = 52/179 (29%), Gaps = 53/179 (29%)

Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACT 92
           KPE  L   +   K+ DFG A            T  Y APEV+    Y+ S+D WSF   
Sbjct: 131 KPENILLDKNGHIKITDFGFAKYVPDVTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGIL 190

Query: 93  AFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRI 152
            +E+  G   F   +              M+                             
Sbjct: 191 IYEMLAGYTPFYDSN-------------TMKT---------------------------- 209

Query: 153 RRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKR-----PTAQQCLQHPWLS 206
                   +++L  + RF      +  + L  L+     +R        +    HPW  
Sbjct: 210 -------YEKILNAELRFPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFK 261

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.6 bits (146), Expect = 2e-11
 Identities = 35/182 (19%), Positives = 58/182 (31%), Gaps = 56/182 (30%)

Query: 33  KPERCLDGIDMRCKVVDFGNA---CRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSF 89
           K E  +   D   K+ DFG                 T +Y APEV+    Y  +VD W  
Sbjct: 132 KLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGL 191

Query: 90  ACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDL 149
               +E+  G + F          ++DH  L                             
Sbjct: 192 GVVMYEMMCGRLPF---------YNQDHERL----------------------------- 213

Query: 150 KRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRP-----TAQQCLQHPW 204
                      + +L+++ RF  T + E    L  LL   P++R       A++ ++H +
Sbjct: 214 ----------FELILMEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRF 263

Query: 205 LS 206
             
Sbjct: 264 FL 265

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 59.0 bits (142), Expect = 7e-11
 Identities = 32/181 (17%), Positives = 50/181 (27%), Gaps = 52/181 (28%)

Query: 33  KPERCLDGIDMRCKVVDFGNACR-ANKQFAEEIQTRQYRAPEVILRA-GYSFSVDMWSFA 90
           KP   L       ++ D G AC  + K+    + T  Y APEV+ +   Y  S D +S  
Sbjct: 134 KPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLG 193

Query: 91  CTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLK 150
           C  F+L  G   F           +       E+                          
Sbjct: 194 CMLFKLLRGHSPF----------RQHKTKDKHEIDRMTLT-------------------- 223

Query: 151 RIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPT-----AQQCLQHPWL 205
                                ++ + E    L  LL     +R       AQ+  + P+ 
Sbjct: 224 ---------------MAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFF 268

Query: 206 S 206
            
Sbjct: 269 R 269

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.8 bits (136), Expect = 3e-10
 Identities = 24/182 (13%), Positives = 51/182 (28%), Gaps = 39/182 (21%)

Query: 33  KPERCLDGIDMRCKVVDFGNACRAN-------KQFAEEIQTRQYRAPEVILRA------G 79
           K +  L   +  C + D G A R +             + T++Y APEV+  +       
Sbjct: 135 KSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFE 194

Query: 80  YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQS 139
                D+++     +E+A    +            +   +                    
Sbjct: 195 SFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPS-------------------- 234

Query: 140 KDYFDRHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQC 199
                    ++ +R++      R  +     S    R  A+ +          R TA + 
Sbjct: 235 ------DPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRI 288

Query: 200 LQ 201
            +
Sbjct: 289 KK 290

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 56.8 bits (136), Expect = 3e-10
 Identities = 19/184 (10%), Positives = 41/184 (22%), Gaps = 53/184 (28%)

Query: 37  CLDGIDMRCKVVDFGNACRAN----------KQFAEEIQTRQYRAPEVILRAGYSFSVDM 86
            L        ++DFG A +            ++      T +Y +    L    S   D+
Sbjct: 137 GLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDL 196

Query: 87  WSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRH 146
            S          G                                           +   
Sbjct: 197 ESLGYVLMYFNLG----------------------------------------SLPWQGL 216

Query: 147 GDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQ---QCLQHP 203
               + ++ +  S  ++        +    EFA +L        + +P      Q  ++ 
Sbjct: 217 KAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNL 276

Query: 204 WLSL 207
           +   
Sbjct: 277 FHRQ 280

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.3 bits (135), Expect = 4e-10
 Identities = 30/180 (16%), Positives = 52/180 (28%), Gaps = 52/180 (28%)

Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQ----TRQYRAPEVILRAGYSFSVDMWS 88
           +    L G ++ CKV DFG A           Q      ++ APE  L   ++   D+WS
Sbjct: 140 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 199

Query: 89  FACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGD 148
           F     EL T         G+       +  ++ +                         
Sbjct: 200 FGILLTELTTK--------GRVPYPGMVNREVLDQ------------------------- 226

Query: 149 LKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ--HPWLS 206
           ++R  R+                E       + +       PE+RPT +        + +
Sbjct: 227 VERGYRMPCPP---------ECPE----SLHDLMCQCWRKEPEERPTFEYLQAFLEDYFT 273

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.9 bits (134), Expect = 6e-10
 Identities = 26/186 (13%), Positives = 47/186 (25%), Gaps = 55/186 (29%)

Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQ------TRQYRAPEVILRAGYSFSVDM 86
                L       K+ DFG +                    ++ APE I    +S   D+
Sbjct: 134 AARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDV 193

Query: 87  WSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRH 146
           WSF    +E  +                           G+ P +    G +  +     
Sbjct: 194 WSFGVLMWEAFSY--------------------------GQKPYR----GMKGSEVTAML 223

Query: 147 GDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQ---CLQHP 203
              +R+                       RE  + +     +  E RP        L++ 
Sbjct: 224 EKGERMGCPAGCP----------------REMYDLMNLCWTYDVENRPGFAAVELRLRNY 267

Query: 204 WLSLRN 209
           +  + N
Sbjct: 268 YYDVVN 273

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 55.6 bits (133), Expect = 6e-10
 Identities = 21/146 (14%), Positives = 40/146 (27%), Gaps = 24/146 (16%)

Query: 33  KPERCLDGIDMRC-----KVVDFGNACRANKQFAEE----------IQTRQYRAPEVILR 77
           KP+  L G           VVDFG          ++            T +Y +    L 
Sbjct: 128 KPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLG 187

Query: 78  AGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALM------MELIGKMPRK 131
              S   D+ +          G + +         +  + +          EL    P +
Sbjct: 188 REQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRELCAGFPEE 247

Query: 132 IA--IGGAQSKDYFDRHGDLKRIRRL 155
               +  A++  +     D   ++ L
Sbjct: 248 FYKYMHYARNLAFDATP-DYDYLQGL 272

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 55.6 bits (133), Expect = 8e-10
 Identities = 37/179 (20%), Positives = 51/179 (28%), Gaps = 53/179 (29%)

Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFACT 92
           KPE  L       +V DFG A R   +      T +  APE+IL  GY+ +VD W+    
Sbjct: 168 KPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPEALAPEIILSKGYNKAVDWWALGVL 227

Query: 93  AFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRI 152
            +E+A G   F            D    + E I                           
Sbjct: 228 IYEMAAGYPPF----------FADQPIQIYEKIVSGK----------------------- 254

Query: 153 RRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKR-----PTAQQCLQHPWLS 206
                           RF    + +  + L  LL     KR             H W +
Sbjct: 255 ---------------VRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFA 298

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.3 bits (130), Expect = 1e-09
 Identities = 29/174 (16%), Positives = 49/174 (28%), Gaps = 50/174 (28%)

Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQ----TRQYRAPEVILRAGYSFSVDMWS 88
               CL G +   KV DFG                    ++ +PEV   + YS   D+WS
Sbjct: 128 AARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWS 187

Query: 89  FACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGD 148
           F    +E+ +         G+   E+  +  ++                          D
Sbjct: 188 FGVLMWEVFSE--------GKIPYENRSNSEVVE-------------------------D 214

Query: 149 LKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQH 202
           +    RL    L              +    + +       PE RP   + L+ 
Sbjct: 215 ISTGFRLYKPRL-------------ASTHVYQIMNHCWKERPEDRPAFSRLLRQ 255

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 54.0 bits (129), Expect = 3e-09
 Identities = 28/183 (15%), Positives = 51/183 (27%), Gaps = 50/183 (27%)

Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQ------TRQYRAPEVILRAGYSFSVDM 86
           KP   +       KV+DFG A           Q      T QY +PE           D+
Sbjct: 138 KPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDV 197

Query: 87  WSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRH 146
           +S  C  +E+ TG+  F           +  +++  + + + P                 
Sbjct: 198 YSLGCVLYEVLTGEPPF---------TGDSPVSVAYQHVREDPI---------------- 232

Query: 147 GDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLS 206
                       S     +           +    ++  L   PE R      ++   + 
Sbjct: 233 ----------PPSARHEGLSA---------DLDAVVLKALAKNPENRYQTAAEMRADLVR 273

Query: 207 LRN 209
           + N
Sbjct: 274 VHN 276

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.6 bits (128), Expect = 4e-09
 Identities = 28/185 (15%), Positives = 49/185 (26%), Gaps = 51/185 (27%)

Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQ-----TRQYRAPEVILRAGYSFSVDMW 87
                L       K+ DFG A     +  E          ++ A E IL   Y+   D+W
Sbjct: 138 AARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVW 197

Query: 88  SFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHG 147
           S+  T +EL T                           G  P      G  + +      
Sbjct: 198 SYGVTVWELMTF--------------------------GSKP----YDGIPASEISSILE 227

Query: 148 DLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSL 207
             +R+ +    +                 +    +V       + RP  ++ +       
Sbjct: 228 KGERLPQPPICT----------------IDVYMIMVKCWMIDADSRPKFRELIIEFSKMA 271

Query: 208 RNSTR 212
           R+  R
Sbjct: 272 RDPQR 276

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.1 bits (124), Expect = 1e-08
 Identities = 24/177 (13%), Positives = 49/177 (27%), Gaps = 53/177 (29%)

Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQ-------TRQYRAPEVILRAGYSFSVD 85
               C+       KV DFG A     +  + +          ++ A E +    ++   D
Sbjct: 157 AARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSD 216

Query: 86  MWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDR 145
           +WSF    +EL T         G     D +   + + L+                    
Sbjct: 217 VWSFGVLLWELMTR--------GAPPYPDVNTFDITVYLL-------------------- 248

Query: 146 HGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQH 202
               +R+ + ++                      E ++       E RP+  + +  
Sbjct: 249 --QGRRLLQPEYCP----------------DPLYEVMLKCWHPKAEMRPSFSELVSR 287

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.4 bits (122), Expect = 2e-08
 Identities = 29/184 (15%), Positives = 52/184 (28%), Gaps = 55/184 (29%)

Query: 34  PERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQ----YRAPEVIL--RAGYSFSVDMW 87
            E  L   +    + DFG +        E          Y AP+++    +G+  +VD W
Sbjct: 157 LENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWW 216

Query: 88  SFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHG 147
           S     +EL TG   F          +++  A +   I K                    
Sbjct: 217 SLGVLMYELLTGASPFTVDG------EKNSQAEISRRILKSE------------------ 252

Query: 148 DLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRP-----TAQQCLQH 202
                                 + +  +    + +  LL   P+KR       A +  +H
Sbjct: 253 --------------------PPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEH 292

Query: 203 PWLS 206
            +  
Sbjct: 293 LFFQ 296

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.5 bits (120), Expect = 4e-08
 Identities = 26/174 (14%), Positives = 48/174 (27%), Gaps = 50/174 (28%)

Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQ----FAEEIQTRQYRAPEVILRAGYSFSVDMWS 88
               CL       KV DFG +                  ++  PEV++ + +S   D+W+
Sbjct: 127 AARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWA 186

Query: 89  FACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGD 148
           F    +E+ +                           GKMP         + +  +    
Sbjct: 187 FGVLMWEIYSL--------------------------GKMP----YERFTNSETAEHIAQ 216

Query: 149 LKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQH 202
             R+ R    S                 +    +        ++RPT +  L +
Sbjct: 217 GLRLYRPHLAS----------------EKVYTIMYSCWHEKADERPTFKILLSN 254

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.8 bits (118), Expect = 8e-08
 Identities = 23/175 (13%), Positives = 39/175 (22%), Gaps = 50/175 (28%)

Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQ-----TRQYRAPEVILRAGYSFSVDMW 87
                L       K+ DFG A          ++       ++ APE +    Y+   D+W
Sbjct: 191 AARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVW 250

Query: 88  SFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHG 147
           S+    +E+ +         G          A   +LI    +                 
Sbjct: 251 SYGILLWEIFSL--------GVNPYPGIPVDANFYKLIQNGFK----------------- 285

Query: 148 DLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQH 202
                                        E    +     F   KRP+       
Sbjct: 286 --------------------MDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSF 320

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.9 bits (116), Expect = 1e-07
 Identities = 27/194 (13%), Positives = 48/194 (24%), Gaps = 55/194 (28%)

Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQ------TRQYRAPEVILRAGYSFSVDM 86
                L       K+ DFG +       +            ++ APE I    +S   D+
Sbjct: 136 AARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDV 195

Query: 87  WSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRH 146
           WS+  T +E  +                           G+ P K      +  +     
Sbjct: 196 WSYGVTMWEALSY--------------------------GQKPYK----KMKGPEVMAFI 225

Query: 147 GDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQ---QCLQHP 203
              KR+                        E    +     +  E RP      Q ++  
Sbjct: 226 EQGKRMECPPECP----------------PELYALMSDCWIYKWEDRPDFLTVEQRMRAC 269

Query: 204 WLSLRNSTRDETKN 217
           + SL +       +
Sbjct: 270 YYSLASKVEGHHHH 283

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 48.7 bits (115), Expect = 2e-07
 Identities = 22/174 (12%), Positives = 40/174 (22%), Gaps = 51/174 (29%)

Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQ-----YRAPEVILRAGYSFSVDMW 87
               CL G +M  K+ DFG +         +          +  PE I    Y+   D+W
Sbjct: 167 ATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVW 226

Query: 88  SFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHG 147
           ++    +E+ +         G        H  ++  +                       
Sbjct: 227 AYGVVLWEIFSY--------GLQPYYGMAHEEVIYYVRDGNILAC--------------- 263

Query: 148 DLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ 201
                                   E    E    +       P  RP+     +
Sbjct: 264 -----------------------PENCPLELYNLMRLCWSKLPADRPSFCSIHR 294

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.8 bits (113), Expect = 2e-07
 Identities = 26/178 (14%), Positives = 45/178 (25%), Gaps = 55/178 (30%)

Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQ------TRQYRAPEVILRAGYSFSVDM 86
                L       K+ DFG      +     +          + APE +    +S + D 
Sbjct: 138 AARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDT 197

Query: 87  WSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRH 146
           W F  T +E+ T                           G+ P            +   +
Sbjct: 198 WMFGVTLWEMFTY--------------------------GQEP------------WIGLN 219

Query: 147 GDLKRIRRLKFWSLDRLLVDKYRFSETD--AREFAEFLVPLLDFTPEKRPTAQQCLQH 202
           G            L ++  +  R    +   ++    +V      PE RPT       
Sbjct: 220 GS---------QILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDF 268

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.9 bits (113), Expect = 3e-07
 Identities = 25/187 (13%), Positives = 49/187 (26%), Gaps = 50/187 (26%)

Query: 33  KPERCLDGIDMRCKVVDFGNA--CRANKQFAEEIQTRQYRAPEVILRAGYSFSVDMWSFA 90
                L G +   K+ DFG +       +        ++ A E +  + Y+ + D+WS+ 
Sbjct: 154 AARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYG 213

Query: 91  CTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLK 150
              +E+ +                    A + E + +  R                    
Sbjct: 214 VLLWEIVSLGGTP---------YCGMTCAELYEKLPQGYR-------------------- 244

Query: 151 RIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQH--PWLSLR 208
                                     E  + +       P +RP+  Q L      L  R
Sbjct: 245 -----------------LEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEER 287

Query: 209 NSTRDET 215
            +  + T
Sbjct: 288 KTYVNTT 294

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 46.6 bits (110), Expect = 7e-07
 Identities = 32/173 (18%), Positives = 50/173 (28%), Gaps = 50/173 (28%)

Query: 33  KPERCLDGIDMRCKVVDFGNACRAN----KQFAEEIQTRQYRAPEVILRAGYSFSVDMWS 88
               CL G +   KV DFG +           A      ++ APE +    +S   D+W+
Sbjct: 142 AARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWA 201

Query: 89  FACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGD 148
           F    +E+AT  M   P            L+ + EL+ K  R                  
Sbjct: 202 FGVLLWEIATYGMSPYP---------GIDLSQVYELLEKDYR------------------ 234

Query: 149 LKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ 201
                                  E    +  E +     + P  RP+  +  Q
Sbjct: 235 -------------------MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 268

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.4 bits (109), Expect = 9e-07
 Identities = 24/175 (13%), Positives = 43/175 (24%), Gaps = 52/175 (29%)

Query: 33  KPERCLDGIDMRCKVVDFGNAC------RANKQFAEEIQTRQYRAPEVILRAGYSFSVDM 86
                L   ++ CKV DFG +        A    +      ++ APE I    ++ + D+
Sbjct: 137 AARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDV 196

Query: 87  WSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRH 146
           WSF    +E+ T                E     +M+ I    R                
Sbjct: 197 WSFGIVMWEVMTYGERP---------YWELSNHEVMKAINDGFR---------------- 231

Query: 147 GDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ 201
                                            + ++        +RP     + 
Sbjct: 232 ---------------------LPTPMDCPSAIYQLMMQCWQQERARRPKFADIVS 265

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 46.3 bits (109), Expect = 9e-07
 Identities = 26/191 (13%), Positives = 52/191 (27%), Gaps = 62/191 (32%)

Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQ--------YRAPEVILRAGYSFSV 84
                L   ++ CKV DFG +       ++   T          + APE I    ++ + 
Sbjct: 155 AARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSAS 214

Query: 85  DMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFD 144
           D+WS+    +E+ +         G+    D  +  + +  I +  R              
Sbjct: 215 DVWSYGIVMWEVMSY--------GERPYWDMTNQDV-INAIEQDYR-------------- 251

Query: 145 RHGDLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQ------ 198
                                              + ++         RP   Q      
Sbjct: 252 -----------------------LPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLD 288

Query: 199 -CLQHPWLSLR 208
             +++P  SL+
Sbjct: 289 KMIRNPN-SLK 298

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.0 bits (108), Expect = 1e-06
 Identities = 26/175 (14%), Positives = 45/175 (25%), Gaps = 50/175 (28%)

Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQ-----TRQYRAPEVILRAGYSFSVDMW 87
                L       K+ DFG A    K      +       ++ APE I    Y+   D+W
Sbjct: 161 AARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVW 220

Query: 88  SFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHG 147
           SF    +E+ +      P                   + +  R                 
Sbjct: 221 SFGVLLWEIFSLGASPYP--------GVKIDEEFCRRLKEGTR----------------- 255

Query: 148 DLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQH 202
                                R  +    E  + ++      P +RPT  + ++H
Sbjct: 256 --------------------MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 290

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.4 bits (104), Expect = 5e-06
 Identities = 30/174 (17%), Positives = 48/174 (27%), Gaps = 50/174 (28%)

Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQ-----YRAPEVILRAGYSFSVDMW 87
                L       K+ DFG A          ++        + APE I    Y+F  D+W
Sbjct: 172 AARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVW 231

Query: 88  SFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHG 147
           S+    +EL +         G          +   ++I +  R +               
Sbjct: 232 SYGIFLWELFSL--------GSSPYPGMPVDSKFYKMIKEGFRML--------------- 268

Query: 148 DLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ 201
                                   E    E  + +    D  P KRPT +Q +Q
Sbjct: 269 ----------------------SPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQ 300

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.1 bits (103), Expect = 5e-06
 Identities = 28/175 (16%), Positives = 49/175 (28%), Gaps = 51/175 (29%)

Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEE-----IQTRQYRAPEVILRAGYSFSVDMW 87
                L   D   K+ DFG A   +     +         ++ APE +    Y+   D+W
Sbjct: 162 AARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVW 221

Query: 88  SFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHG 147
           SF    +E+ T                           G  P      G   ++ F    
Sbjct: 222 SFGVLLWEIFTL--------------------------GGSP----YPGVPVEELFKLLK 251

Query: 148 DLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQH 202
           +  R+ +    +                 E    +       P +RPT +Q ++ 
Sbjct: 252 EGHRMDKPSNCT----------------NELYMMMRDCWHAVPSQRPTFKQLVED 290

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.5 bits (102), Expect = 7e-06
 Identities = 27/180 (15%), Positives = 49/180 (27%), Gaps = 52/180 (28%)

Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQ----TRQYRAPEVILRAGYSFSVDMWS 88
           +    L    + CK+ DFG A           +      ++ APE I    ++   D+WS
Sbjct: 136 RAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWS 195

Query: 89  FACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGD 148
           F     E+ T         G+       +  ++                          +
Sbjct: 196 FGILLTEIVTH--------GRIPYPGMTNPEVIQ-------------------------N 222

Query: 149 LKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ--HPWLS 206
           L+R  R+                +    E  + +       PE RPT          + +
Sbjct: 223 LERGYRMVRP-------------DNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFT 269

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.8 bits (100), Expect = 1e-05
 Identities = 22/174 (12%), Positives = 44/174 (25%), Gaps = 50/174 (28%)

Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQ----TRQYRAPEVILRAGYSFSVDMWS 88
                L   +   K+ DFG +         +        ++ APE I    ++ + D+W 
Sbjct: 135 AARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWM 194

Query: 89  FACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGD 148
           F    +E+                             G  P +    G ++ D   R  +
Sbjct: 195 FGVCMWEILMH--------------------------GVKPFQ----GVKNNDVIGRIEN 224

Query: 149 LKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQH 202
            +R+                             +     + P +RP   +    
Sbjct: 225 GERLPMPPNCP----------------PTLYSLMTKCWAYDPSRRPRFTELKAQ 262

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.4 bits (96), Expect = 4e-05
 Identities = 21/175 (12%), Positives = 47/175 (26%), Gaps = 51/175 (29%)

Query: 33  KPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTR-----QYRAPEVILRAGYSFSVDMW 87
               C+   D   K+ DFG      +        +     ++ +PE +    ++   D+W
Sbjct: 160 AARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVW 219

Query: 88  SFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHG 147
           SF    +E+AT                            + P +    G  ++       
Sbjct: 220 SFGVVLWEIATL--------------------------AEQPYQ----GLSNEQVLRFVM 249

Query: 148 DLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQH 202
           +   + +                         E +     + P+ RP+  + +  
Sbjct: 250 EGGLLDKPDNCP----------------DMLFELMRMCWQYNPKMRPSFLEIISS 288

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	237
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	100.0
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	100.0
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	100.0
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	100.0
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	100.0
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	100.0
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	100.0
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	100.0
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	100.0
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	100.0
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	100.0
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	100.0
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	100.0
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	100.0
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	100.0
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	100.0
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	100.0
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	100.0
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	100.0
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	100.0
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	100.0
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	100.0
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	100.0
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	100.0
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	100.0
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	100.0
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	100.0
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	100.0
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	100.0
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	100.0
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	100.0
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	100.0
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	100.0
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	100.0
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	100.0
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	100.0
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	100.0
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	100.0
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	100.0
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	100.0
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	100.0
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	100.0
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	100.0
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	100.0
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	100.0
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	100.0
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	100.0
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	100.0
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	99.97
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	99.97
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	99.97
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.97
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	99.97
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	99.97
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	99.97
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	99.97
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	99.97
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	99.97
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	99.96
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	99.96
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	99.38
d2ppqa1	316	Homoserine kinase ThrB {Agrobacterium tumefaciens	92.01
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	88.27
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	85.35

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4e-40  Score=264.92  Aligned_cols=190  Identities=22%  Similarity=0.267  Sum_probs=152.6

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecC--cCcccCcCCCcccchHHhhhcC
Q 026540            2 TIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRAN--KQFAEEIQTRQYRAPEVILRAG   79 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~--~~~~~~~~~~~~~~PE~~~~~~   79 (237)
                      ++++..++.++.|++.||+|+|..+++||||||+|||++.++.+||+|||++....  .......||+.|+|||++.+.+
T Consensus       112 ~~~~~~~~~~~~qi~~aL~yLH~~~ivHrDiKp~NILi~~~~~~kl~dfg~~~~~~~~~~~~~~~gT~~Y~APE~~~~~~  191 (305)
T d1blxa_         112 GVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSS  191 (305)
T ss_dssp             CSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECSCCSCCCCCGGGGGCCCCCCCTTCCHHHHTTCC
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCEEecCCCccEEEEcCCCCeeecchhhhhhhcccccCCCcccChhhcCcchhcCCC
Confidence            46789999999999999999999999999999999999999999999999986443  3345678899999999999999


Q ss_pred             CCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCc
Q 026540           80 YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWS  159 (237)
Q Consensus        80 ~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (237)
                      ++.++|+||+||++++|++|+.||.+.      ...+++..+.+..+.+....+..............        ...+
T Consensus       192 y~~~~DiwSlG~il~ell~g~~pf~~~------~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~  257 (305)
T d1blxa_         192 YATPVDLWSVGCIFAEMFRRKPLFRGS------SDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSK--------SAQP  257 (305)
T ss_dssp             CCTHHHHHHHHHHHHHHHHSSCSCCCS------SHHHHHHHHHHHHCCCCGGGSCTTCSSCGGGSCCC--------CCCC
T ss_pred             CChhehhhchHHHHHHHHHCCCCCCCC------CHHHHHHHHHHhhCCCchhcccccccchhhhhccc--------cccc
Confidence            999999999999999999999999876      47788889999988876655433222111110000        0000


Q ss_pred             hhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccCCc
Q 026540          160 LDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNSTR  212 (237)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~~~  212 (237)
                             ........++.+.+||.+||++||++|||++|+|+||||+..+.+.
T Consensus       258 -------~~~~~~~~s~~~~dli~~mL~~dP~~R~sa~e~L~Hpff~~i~~~k  303 (305)
T d1blxa_         258 -------IEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDLERCK  303 (305)
T ss_dssp             -------GGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTTCCCCC
T ss_pred             -------hhhccccCCHHHHHHHHHHCcCChhHCcCHHHHhcChhhcCchhhC
Confidence                   1112334567889999999999999999999999999999887654

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.3e-41  Score=262.77  Aligned_cols=159  Identities=21%  Similarity=0.329  Sum_probs=133.8

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecC-cCcccCcCCCcccchHHhhhcCC
Q 026540            2 TIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRAN-KQFAEEIQTRQYRAPEVILRAGY   80 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~-~~~~~~~~~~~~~~PE~~~~~~~   80 (237)
                      .++|.+++.++.|++.||+|+|+.+++||||||+|||++.++.+||+|||++.... .......||+.|+|||++.+..+
T Consensus       102 ~l~e~~~~~i~~qi~~al~~lH~~~ivHrDiKp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~Gt~~Y~APE~~~~~~~  181 (263)
T d2j4za1         102 KFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMH  181 (263)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCSCSCCCCCCCEETTEEGGGCCHHHHTTCCC
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCeeeeeeccccceecCCCCEeecccceeeecCCCcccccCCCCcccCHHHHcCCCC
Confidence            36899999999999999999999999999999999999999999999999996544 33445688999999999999899


Q ss_pred             CchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCch
Q 026540           81 SFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSL  160 (237)
Q Consensus        81 ~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (237)
                      +.++|+||+||++|+|++|+.||.+.+      ....+..+.                                      
T Consensus       182 ~~~~DiwSlGvilyell~G~~Pf~~~~------~~~~~~~i~--------------------------------------  217 (263)
T d2j4za1         182 DEKVDLWSLGVLCYEFLVGKPPFEANT------YQETYKRIS--------------------------------------  217 (263)
T ss_dssp             CTTHHHHHHHHHHHHHHHSSCTTCCSS------HHHHHHHHH--------------------------------------
T ss_pred             CchhhhhhHhHHHHHHhcCCCCCCCCC------HHHHHHHHH--------------------------------------
Confidence            999999999999999999999997653      222222211                                      


Q ss_pred             hHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcc
Q 026540          161 DRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLR  208 (237)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~  208 (237)
                          ......+..+++++.+||.+||+.||.+|||++|+|+||||+..
T Consensus       218 ----~~~~~~p~~~s~~~~~li~~~L~~dp~~R~t~~eil~hp~~~~~  261 (263)
T d2j4za1         218 ----RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITAN  261 (263)
T ss_dssp             ----TTCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTCHHHHHH
T ss_pred             ----cCCCCCCccCCHHHHHHHHHHccCCHhHCcCHHHHHcCcCcCCc
Confidence                11222344567889999999999999999999999999999753

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-39  Score=259.59  Aligned_cols=161  Identities=24%  Similarity=0.339  Sum_probs=133.4

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecC---cCcccCcCCCcccchHHhhhc
Q 026540            2 TIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRAN---KQFAEEIQTRQYRAPEVILRA   78 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~---~~~~~~~~~~~~~~PE~~~~~   78 (237)
                      +++|.+++.++.|++.||.|+|+.+++||||||+|||++.++.+||+|||++....   ......+||+.|+|||++.+.
T Consensus       112 ~l~~~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~gt~~Y~aPE~~~~~  191 (293)
T d1yhwa1         112 CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRK  191 (293)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCCBCCCCSCGGGCCHHHHSSS
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCCcccCCcHHHeEECCCCcEeeccchhheeeccccccccccccCCCccChhhhcCC
Confidence            46899999999999999999999999999999999999999999999999997653   233456799999999999998


Q ss_pred             CCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCC
Q 026540           79 GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFW  158 (237)
Q Consensus        79 ~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (237)
                      .++.++|+||+||++|+|++|..||.+.+      ....+..+.... .+                              
T Consensus       192 ~~~~~~DiwSlGvilyemltG~~Pf~~~~------~~~~~~~~~~~~-~~------------------------------  234 (293)
T d1yhwa1         192 AYGPKVDIWSLGIMAIEMIEGEPPYLNEN------PLRALYLIATNG-TP------------------------------  234 (293)
T ss_dssp             CBCTHHHHHHHHHHHHHHHHSSCTTTTSC------HHHHHHHHHHHC-SC------------------------------
T ss_pred             CCCchhceehHhHHHHHHhhCCCCCCCCC------HHHHHHHHHhCC-CC------------------------------
Confidence            89999999999999999999999997653      333333222110 00                              


Q ss_pred             chhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCc
Q 026540          159 SLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSL  207 (237)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~  207 (237)
                              ....+..+++.+.+||.+||+.||.+|||++|+|+||||+.
T Consensus       235 --------~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~Hp~~~~  275 (293)
T d1yhwa1         235 --------ELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLKI  275 (293)
T ss_dssp             --------CCSSGGGSCHHHHHHHHHHTCSSTTTSCCHHHHTTCGGGGG
T ss_pred             --------CCCCcccCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhCC
Confidence                    11123445788999999999999999999999999999973

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.1e-40  Score=267.28  Aligned_cols=199  Identities=21%  Similarity=0.253  Sum_probs=132.4

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhhh-cCCccCCCCCccccCCCCcEEEeecCcceecC-cCcccCcCCCcccchHHhhhcC
Q 026540            2 TIVEKKLKRRAKRAVANISIRRAS-MGGIELPKPERCLDGIDMRCKVVDFGNACRAN-KQFAEEIQTRQYRAPEVILRAG   79 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~~-~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~-~~~~~~~~~~~~~~PE~~~~~~   79 (237)
                      .+++..+..++.|++.||.|+|+. +|+||||||+|||++.++.+||+|||+|.... ......+||+.|+|||++.+..
T Consensus       100 ~l~~~~~~~~~~qil~aL~yLH~~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~~~~~~GT~~Y~APEvl~~~~  179 (322)
T d1s9ja_         100 RIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTH  179 (322)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHTC---CCSSCCCCHHHHHCSC
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHhCCEEccccCHHHeeECCCCCEEEeeCCCccccCCCccccccCCccccCchHHcCCC
Confidence            367899999999999999999985 89999999999999999999999999986543 2344568999999999999999


Q ss_pred             CCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhc----CCCchhhhcccCccchhccc
Q 026540           80 YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIG----GAQSKDYFDRHGDLKRIRRL  155 (237)
Q Consensus        80 ~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~  155 (237)
                      |+.++|+||+||++++|++|+.||.+.+     ....+........+.........    ..................  
T Consensus       180 y~~~~DiWSlGvil~ell~G~~Pf~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  252 (322)
T d1s9ja_         180 YSVQSDIWSMGLSLVEMAVGRYPIPPPD-----AKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFE--  252 (322)
T ss_dssp             CCTTHHHHHHHHHHHHHHHSSCCSSCCC-----TTHHHHHC------------------------------CCCCHHH--
T ss_pred             CCcHHHHHHHHHHHHHHHHCCCCCCCCC-----HHHHHHHHHHHhcCCcccCCcccccccccccccccccccchhHHH--
Confidence            9999999999999999999999998764     22333332223222221111000    000000000000000000  


Q ss_pred             cCCchhHHhhhh-cCC-CHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccC
Q 026540          156 KFWSLDRLLVDK-YRF-SETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNS  210 (237)
Q Consensus       156 ~~~~~~~~~~~~-~~~-~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~  210 (237)
                         ......... ... ....+.++.+||.+||++||.+|||++|+|+||||+..+.
T Consensus       253 ---~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~L~Hpf~~~~~~  306 (322)
T d1s9ja_         253 ---LLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSDA  306 (322)
T ss_dssp             ---HHHHHHTSCCCCCCBTTBCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHHHHH
T ss_pred             ---HHhhhhccCCccCccccCCHHHHHHHHHHcCCChhHCcCHHHHhhCHhhCcCCc
Confidence               000000000 011 1234678999999999999999999999999999986554

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.8e-39  Score=258.45  Aligned_cols=188  Identities=23%  Similarity=0.299  Sum_probs=147.9

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCc---CcccCcCCCcccchHHhhhc
Q 026540            2 TIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK---QFAEEIQTRQYRAPEVILRA   78 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~---~~~~~~~~~~~~~PE~~~~~   78 (237)
                      .++|.++..+++|++.||+|+|+.+++||||||+|||++.++.+||+|||++.....   .....+||+.|+|||++...
T Consensus        96 ~l~~~~~~~~~~qil~aL~~lH~~~iiHrDiKp~NIli~~~~~~KL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~  175 (299)
T d1ua2a_          96 VLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGA  175 (299)
T ss_dssp             SCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCCCCCCCSCCCCTTCCHHHHTTC
T ss_pred             CCCHHHHHHHHHHHHHHHHHhhccceecccCCcceEEecCCCccccccCccccccCCCcccccceecChhhccHHHHccC
Confidence            367889999999999999999999999999999999999999999999999965543   23345789999999999765


Q ss_pred             -CCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccC
Q 026540           79 -GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKF  157 (237)
Q Consensus        79 -~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (237)
                       .++.++|+||+||++++|++|..||.+.      .+.+++..+.+..+.++...+............       .....
T Consensus       176 ~~~~~~~DiwSlGvil~el~~g~~pf~~~------~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~  242 (299)
T d1ua2a_         176 RMYGVGVDMWAVGCILAELLLRVPFLPGD------SDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTF-------KSFPG  242 (299)
T ss_dssp             SCCCHHHHHHHHHHHHHHHHHSSCSSCCS------SHHHHHHHHHHHHCCCCTTTSSSTTSSTTCCCC-------CCCCC
T ss_pred             CCCChhhhhhhcchHHHHHHhCcCCCCCC------CHHHHHHHHHHhcCCCChhhccchhccchhhhh-------ccCCC
Confidence             5799999999999999999999999876      478889999999988776554332222111100       00011


Q ss_pred             CchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCccc
Q 026540          158 WSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRN  209 (237)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~  209 (237)
                      .+....       ....++++.+||.+||+.||++|||++|+|+||||+...
T Consensus       243 ~~~~~~-------~~~~s~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f~~~p  287 (299)
T d1ua2a_         243 IPLHHI-------FSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNRP  287 (299)
T ss_dssp             CCHHHH-------CTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSGGGTSSS
T ss_pred             CChHHh-------cccCCHHHHHHHHHHccCChhhCcCHHHHhCCHhhCCCC
Confidence            111111       123467899999999999999999999999999998543

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=3e-38  Score=259.52  Aligned_cols=207  Identities=37%  Similarity=0.710  Sum_probs=173.8

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhh-hcCCccCCCCCccccCCCC------cEEEeecCcceecCcCcccCcCCCcccchHH
Q 026540            2 TIVEKKLKRRAKRAVANISIRRA-SMGGIELPKPERCLDGIDM------RCKVVDFGNACRANKQFAEEIQTRQYRAPEV   74 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~-~~~~h~d~kp~Nili~~~~------~~kl~dfg~~~~~~~~~~~~~~~~~~~~PE~   74 (237)
                      .+++..+..++.|++.||+|+|+ .+|+||||||+|||++.++      .++++|||.+..........++++.|+|||+
T Consensus       121 ~~~~~~i~~i~~qil~al~~lh~~~~IvHrDlKp~NIll~~~~~~~~~~~~kl~dfg~s~~~~~~~~~~~gt~~y~aPE~  200 (362)
T d1q8ya_         121 GIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQTREYRSPEV  200 (362)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTTTEEEEEECCCTTCEETTBCCCSCCSCGGGCCHHH
T ss_pred             CCcHHHHHHHHHHHHHHHHHHhhhcCcccccCChhHeeeeccCcccccceeeEeecccccccccccccccccccccChhh
Confidence            35678999999999999999998 8899999999999997654      4899999999877777777889999999999


Q ss_pred             hhhcCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcc
Q 026540           75 ILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRR  154 (237)
Q Consensus        75 ~~~~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (237)
                      +.+..++.++|+||+||+++++++|+.||.+..........+.+......+|.++............++...........
T Consensus       201 ~~~~~~~~~~DiwSlG~il~el~~g~~pF~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~  280 (362)
T d1q8ya_         201 LLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISK  280 (362)
T ss_dssp             HHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCC
T ss_pred             ccccCCCccccccchHHHHHHHHHCCCCCCCCccccccchhHHHHHHHHHhCCCCHHHhhcccccccccccchhhhcccc
Confidence            99999999999999999999999999999877655555677888889999999999888777777777776666666666


Q ss_pred             ccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcc
Q 026540          155 LKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLR  208 (237)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~  208 (237)
                      ....+...............++.+.+||.+||++||.+|||++|+|+||||+..
T Consensus       281 ~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~Rpta~e~L~Hp~f~~~  334 (362)
T d1q8ya_         281 LKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKDT  334 (362)
T ss_dssp             CCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTCGGGTTC
T ss_pred             ccCCchhhhcccccccCcccCHHHHHHHHHHCCCChhHCcCHHHHhcCcccCCC
Confidence            666677777777788888899999999999999999999999999999999944

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=1.8e-39  Score=265.21  Aligned_cols=162  Identities=23%  Similarity=0.267  Sum_probs=138.2

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcCcccCcCCCcccchHHhhhcCCC
Q 026540            2 TIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYS   81 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~   81 (237)
                      .++|.+++.++.|++.||.|+|+.+++||||||+|||++.++.+||+|||++...........||+.|+|||++.+..++
T Consensus       137 ~l~e~~~~~i~~qi~~aL~yLH~~~iiHRDIKP~NILl~~~g~ikL~DFG~a~~~~~~~~~~~Gt~~Y~APE~~~~~~~~  216 (350)
T d1rdqe_         137 RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPEALAPEIILSKGYN  216 (350)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSCBCCCEECGGGCCHHHHTTCCBC
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCEecCcCCHHHcccCCCCCEEeeeceeeeecccccccccCccccCCHHHHcCCCCC
Confidence            36789999999999999999999999999999999999999999999999998877766778899999999999999999


Q ss_pred             chhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCchh
Q 026540           82 FSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLD  161 (237)
Q Consensus        82 ~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (237)
                      .++|+||+||++|+|++|..||.+.+      .......+.                                       
T Consensus       217 ~~~DiwSlGvilyemltG~~Pf~~~~------~~~~~~~i~---------------------------------------  251 (350)
T d1rdqe_         217 KAVDWWALGVLIYEMAAGYPPFFADQ------PIQIYEKIV---------------------------------------  251 (350)
T ss_dssp             THHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHH---------------------------------------
T ss_pred             ccccccchhHHHHHHHhCCCCCCCcC------HHHHHHHHh---------------------------------------
Confidence            99999999999999999999997652      222222221                                       


Q ss_pred             HHhhhhcCCCHHhHHHHHHHHHhccccCCCCCC-----CHHHHhcCCCcCcccCC
Q 026540          162 RLLVDKYRFSETDAREFAEFLVPLLDFTPEKRP-----TAQQCLQHPWLSLRNST  211 (237)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~-----t~~ell~hp~f~~~~~~  211 (237)
                         ......+..+++++.+||.+||+.||.+|+     |++++++||||.+.++.
T Consensus       252 ---~~~~~~p~~~s~~~~~li~~~L~~dP~kR~~~~r~t~~ell~Hp~f~~~~~~  303 (350)
T d1rdqe_         252 ---SGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWI  303 (350)
T ss_dssp             ---HCCCCCCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTSGGGTTCCHH
T ss_pred             ---cCCCCCCccCCHHHHHHHHHHhhhCHHhccccccccHHHHHcCccccCCCHH
Confidence               112223445678899999999999999995     99999999999987653

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.1e-39  Score=254.29  Aligned_cols=161  Identities=19%  Similarity=0.176  Sum_probs=128.6

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecC-----cCcccCcCCCcccchHHhh
Q 026540            2 TIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRAN-----KQFAEEIQTRQYRAPEVIL   76 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~-----~~~~~~~~~~~~~~PE~~~   76 (237)
                      .++|.+++.++.|++.||+|+|+.+++||||||+|||++.++.+||+|||++....     ......+||+.|+|||++.
T Consensus        99 ~l~e~~~~~i~~qi~~al~ylH~~~IiHrDiKp~NILl~~~~~~KL~DFG~a~~~~~~~~~~~~~~~~GT~~Y~APE~~~  178 (271)
T d1nvra_          99 GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK  178 (271)
T ss_dssp             BCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECEETTEECCBCCCCSCGGGSCTHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHcCCccCcccHHHEEECCCCCEEEccchhheeeccCCccccccceeeCcCccCHhHhc
Confidence            47899999999999999999999999999999999999999999999999997543     1234568999999999999


Q ss_pred             hcCC-CchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccc
Q 026540           77 RAGY-SFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRL  155 (237)
Q Consensus        77 ~~~~-~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (237)
                      +..+ +.++|+||+||++|+|++|+.||.....     ........ ..  ..                           
T Consensus       179 ~~~~~~~~~DiwSlGvilyeml~G~~pf~~~~~-----~~~~~~~~-~~--~~---------------------------  223 (271)
T d1nvra_         179 RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD-----SCQEYSDW-KE--KK---------------------------  223 (271)
T ss_dssp             CSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSST-----TSHHHHHH-HT--TC---------------------------
T ss_pred             CCCCCCCceeeeHhHHHHHHHHhCCCCCCCCCh-----HHHHHHHH-hc--CC---------------------------
Confidence            8876 5789999999999999999999975531     11111100 00  00                           


Q ss_pred             cCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCc
Q 026540          156 KFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSL  207 (237)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~  207 (237)
                                .........++++.+||.+||+.||++|||++|+++||||+.
T Consensus       224 ----------~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~eil~hpwf~~  265 (271)
T d1nvra_         224 ----------TYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNK  265 (271)
T ss_dssp             ----------TTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTTTTC
T ss_pred             ----------CCCCccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCHhhCc
Confidence                      000011234678899999999999999999999999999974

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.3e-39  Score=257.86  Aligned_cols=164  Identities=20%  Similarity=0.246  Sum_probs=134.8

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCc-----CcccCcCCCcccchHHhh
Q 026540            2 TIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK-----QFAEEIQTRQYRAPEVIL   76 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~-----~~~~~~~~~~~~~PE~~~   76 (237)
                      .++|.++..++.|++.||+|+|+.+++||||||+|||++.++.+||+|||++.....     .....+||+.|+|||++.
T Consensus       104 ~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~NIll~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~GT~~Y~APE~~~  183 (288)
T d1uu3a_         104 SFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLT  183 (288)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECC----------CCCCGGGCCHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHhhccccEEcCcCCccccccCCCceEEecccccceecccCCcccccccccCCccccCceeec
Confidence            368999999999999999999999999999999999999999999999999976532     233457999999999999


Q ss_pred             hcCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcccc
Q 026540           77 RAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLK  156 (237)
Q Consensus        77 ~~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (237)
                      +..++.++|+||+||++|+|++|..||.+.+      .......+.                                  
T Consensus       184 ~~~~~~~~DiwSlGvilyell~g~~Pf~~~~------~~~~~~~i~----------------------------------  223 (288)
T d1uu3a_         184 EKSACKSSDLWALGCIIYQLVAGLPPFRAGN------EYLIFQKII----------------------------------  223 (288)
T ss_dssp             TCCCCHHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHH----------------------------------
T ss_pred             cCCCCcccceehhhHHHHHHhhCCCCCCCcC------HHHHHHHHH----------------------------------
Confidence            9999999999999999999999999997652      222222221                                  


Q ss_pred             CCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHH------HhcCCCcCcccCCcc
Q 026540          157 FWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQ------CLQHPWLSLRNSTRD  213 (237)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e------ll~hp~f~~~~~~~~  213 (237)
                              .....++..+++++.+||.+||+.||.+|||++|      +++||||.+.++...
T Consensus       224 --------~~~~~~p~~~s~~~~~li~~~L~~dP~~R~t~~e~~~~~~i~~Hpff~~i~w~~l  278 (288)
T d1uu3a_         224 --------KLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENL  278 (288)
T ss_dssp             --------TTCCCCCTTCCHHHHHHHHTTSCSSGGGSTTSGGGTCHHHHHTSGGGTTCCCTTG
T ss_pred             --------cCCCCCCccCCHHHHHHHHHHccCCHhHCcCHHHHcCCHHHHcCCccCCCCHHHh
Confidence                    1122234456788999999999999999999998      588999998877654

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=4.2e-39  Score=259.62  Aligned_cols=161  Identities=22%  Similarity=0.237  Sum_probs=137.6

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcCcccCcCCCcccchHHhhhcCCCc
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSF   82 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~   82 (237)
                      +++..++.++.|++.||+|+|+.+++||||||+|||++.++.+||+|||++...........||+.|+|||++.+..++.
T Consensus       101 ~~~~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~Gt~~Y~APE~l~~~~y~~  180 (316)
T d1fota_         101 FPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYTLCGTPDYIAPEVVSTKPYNK  180 (316)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTSCEEECCCSSCEECSSCBCCCCSCTTTCCHHHHTTCCBCT
T ss_pred             ccccHHHHHHHHHHHhhhhhccCcEEccccCchheeEcCCCCEEEecCccceEeccccccccCcccccCHHHHcCCCCCc
Confidence            56788999999999999999999999999999999999999999999999988777777789999999999999889999


Q ss_pred             hhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCchhH
Q 026540           83 SVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLDR  162 (237)
Q Consensus        83 ~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (237)
                      ++|+||+||++|+|++|..||.+.+      .......+                                         
T Consensus       181 ~~DiwSlGvilyemltG~~Pf~~~~------~~~~~~~i-----------------------------------------  213 (316)
T d1fota_         181 SIDWWSFGILIYEMLAGYTPFYDSN------TMKTYEKI-----------------------------------------  213 (316)
T ss_dssp             THHHHHHHHHHHHHHHSSCTTCCSS------HHHHHHHH-----------------------------------------
T ss_pred             hhhccccchhHHHHHhCCCCCCCcC------HHHHHHHH-----------------------------------------
Confidence            9999999999999999999997653      22222221                                         


Q ss_pred             HhhhhcCCCHHhHHHHHHHHHhccccCCCCCC-----CHHHHhcCCCcCcccCC
Q 026540          163 LLVDKYRFSETDAREFAEFLVPLLDFTPEKRP-----TAQQCLQHPWLSLRNST  211 (237)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~-----t~~ell~hp~f~~~~~~  211 (237)
                       .......+..+++++.+++.+||+.||.+|+     |++++++||||++.++.
T Consensus       214 -~~~~~~~p~~~s~~~~~li~~~L~~dp~~R~~~~r~t~~~il~Hp~f~~i~~~  266 (316)
T d1fota_         214 -LNAELRFPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKEVVWE  266 (316)
T ss_dssp             -HHCCCCCCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTSGGGSSCCHH
T ss_pred             -HcCCCCCCCCCCHHHHHHHHHHhhhCHHhccccchhhHHHHHcCcccccCCHH
Confidence             1112233445678899999999999999996     89999999999987544

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.1e-39  Score=261.01  Aligned_cols=161  Identities=23%  Similarity=0.317  Sum_probs=135.5

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecC---cCcccCcCCCcccchHHhhhc
Q 026540            2 TIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRAN---KQFAEEIQTRQYRAPEVILRA   78 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~---~~~~~~~~~~~~~~PE~~~~~   78 (237)
                      .++|.+++.+++|++.||+|+|+.+++||||||+|||++.++.+||+|||++....   ......+||+.|+|||++.+.
T Consensus       101 ~~~e~~~~~~~~qil~al~ylH~~~iiHRDlKP~NILl~~~g~vkl~DFG~a~~~~~~~~~~~~~~GT~~Y~aPE~~~~~  180 (337)
T d1o6la_         101 VFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDN  180 (337)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTCCBCCCEECGGGCCGGGGSSS
T ss_pred             CCcHHHHHHHHHHHhhhhhhhhhcCccccccCHHHeEecCCCCEEEeecccccccccCCcccccceeCHHHhhhhhccCC
Confidence            46899999999999999999999999999999999999999999999999997543   334456899999999999999


Q ss_pred             CCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCC
Q 026540           79 GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFW  158 (237)
Q Consensus        79 ~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (237)
                      +++.++|+||+||++|+|++|+.||.+.+      .......+                                     
T Consensus       181 ~y~~~~DiwSlGvilyeml~G~~pf~~~~------~~~~~~~i-------------------------------------  217 (337)
T d1o6la_         181 DYGRAVDWWGLGVVMYEMMCGRLPFYNQD------HERLFELI-------------------------------------  217 (337)
T ss_dssp             CBCTTHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHH-------------------------------------
T ss_pred             CCChhhcccchhhHHHHHHHCCCCCCCcC------HHHHHHHH-------------------------------------
Confidence            99999999999999999999999998763      22222111                                     


Q ss_pred             chhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCC-----HHHHhcCCCcCcccC
Q 026540          159 SLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPT-----AQQCLQHPWLSLRNS  210 (237)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t-----~~ell~hp~f~~~~~  210 (237)
                           ......++..+++++.+||.+||+.||.+|++     ++|+++||||.+.++
T Consensus       218 -----~~~~~~~p~~~s~~~~dli~~~L~~dP~~R~~~~~~~~~eil~Hp~f~~i~~  269 (337)
T d1o6la_         218 -----LMEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINW  269 (337)
T ss_dssp             -----HHCCCCCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTTCCH
T ss_pred             -----hcCCCCCCccCCHHHHHHHHhhccCCchhhcccccccHHHHHcCcccccCCH
Confidence                 11223345566788999999999999999994     999999999987643

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.1e-38  Score=257.31  Aligned_cols=195  Identities=26%  Similarity=0.348  Sum_probs=155.8

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcCcccCcCCCcccchHHhhhc-CC
Q 026540            2 TIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRA-GY   80 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~PE~~~~~-~~   80 (237)
                      .|++..++.+++|++.||.|+|+.+++||||||+|||++.++.+|++|||++.......+...+++.|+|||++.+. .+
T Consensus       117 ~l~~~~~~~~~~qi~~aL~~LH~~~IiHrDiKp~NIL~~~~~~~kl~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~  196 (346)
T d1cm8a_         117 KLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQADSEMTGYVVTRWYRAPEVILNWMRY  196 (346)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCSSCCSSCSCGGGCCTHHHHTTTCC
T ss_pred             cccHHHHHHHHHHHHHHHHHHHhCCCcccccCcchhhcccccccccccccceeccCCccccccccccccCHHHHcCCCCC
Confidence            47899999999999999999999999999999999999999999999999998888777788999999999999875 46


Q ss_pred             CchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCch
Q 026540           81 SFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSL  160 (237)
Q Consensus        81 ~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (237)
                      +.++|+||+||++++|++|..||.+.      .....+..+.+..+.++..................    .........
T Consensus       197 ~~~~DiwSlGvil~ell~g~~pf~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~  266 (346)
T d1cm8a_         197 TQTVDIWSVGCIMAEMITGKTLFKGS------DHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKG----LPELEKKDF  266 (346)
T ss_dssp             CTTHHHHHHHHHHHHHHHSSCSSCCS------SHHHHHHHHHHHHCCCCHHHHHTCSCHHHHHHHHH----SCCCCCCCG
T ss_pred             CccchhhcchHHHHHHHHCcCCCCCC------ChHHHHHHHHhccCCCcHHHHhhhcchhhhhhhcc----CCcccccch
Confidence            89999999999999999999999876      47888899999999998887654433221110000    000000011


Q ss_pred             hHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccCCcc
Q 026540          161 DRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNSTRD  213 (237)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~~~~  213 (237)
                      .       ......++.+.+||.+||++||.+|||++|+|+||||+.......
T Consensus       267 ~-------~~~~~~s~~~~dli~~mL~~dP~~R~ta~eiL~Hp~f~~~~~~~~  312 (346)
T d1cm8a_         267 A-------SILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLHDTED  312 (346)
T ss_dssp             G-------GTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTC----
T ss_pred             H-------HhccCCCHHHHHHHHHHCcCChhHCcCHHHHhcChhhCcCCCccc
Confidence            1       112345678899999999999999999999999999998764433

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.2e-39  Score=255.10  Aligned_cols=162  Identities=21%  Similarity=0.274  Sum_probs=130.6

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCc---CcccCcCCCcccchHHhh--
Q 026540            2 TIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK---QFAEEIQTRQYRAPEVIL--   76 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~---~~~~~~~~~~~~~PE~~~--   76 (237)
                      .++|.+++.++.|++.||+|+|+.+++||||||+|||++.++.+||+|||++.....   ......||+.|+|||++.  
T Consensus       106 ~l~e~~~~~i~~qi~~gL~ylH~~~ivHrDiKp~NIll~~~~~~Kl~DFG~a~~~~~~~~~~~~~~Gt~~y~APE~l~~~  185 (288)
T d2jfla1         106 PLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCE  185 (288)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECHHHHHHHTCCCSCCTTCCHHHHTTC
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCEEEeecChhheeECCCCCEEEEechhhhccCCCcccccccccccccCCHHHHhhc
Confidence            378999999999999999999999999999999999999999999999999865442   234568899999999985  


Q ss_pred             ---hcCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhc
Q 026540           77 ---RAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIR  153 (237)
Q Consensus        77 ---~~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (237)
                         ...++.++|+||+||++|+|++|..||.+.+      ....+..+...  ..                         
T Consensus       186 ~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~~------~~~~~~~i~~~--~~-------------------------  232 (288)
T d2jfla1         186 TSKDRPYDYKADVWSLGITLIEMAEIEPPHHELN------PMRVLLKIAKS--EP-------------------------  232 (288)
T ss_dssp             STTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTSC------GGGHHHHHHHS--CC-------------------------
T ss_pred             ccCCCCCChhhhHHHHHHHHHHHhhCCCCCCCCC------HHHHHHHHHcC--CC-------------------------
Confidence               3457899999999999999999999997653      22222222110  00                         


Q ss_pred             cccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcc
Q 026540          154 RLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLR  208 (237)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~  208 (237)
                                  .....+..+++++.+||.+||+.||.+|||++|+++||||+..
T Consensus       233 ------------~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~ell~hp~~~~~  275 (288)
T d2jfla1         233 ------------PTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTVD  275 (288)
T ss_dssp             ------------CCCSSGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTSGGGCCC
T ss_pred             ------------CCCCccccCCHHHHHHHHHHccCChhHCcCHHHHhcCcccCCC
Confidence                        0011233457889999999999999999999999999999853

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.6e-38  Score=252.58  Aligned_cols=191  Identities=23%  Similarity=0.331  Sum_probs=148.4

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecC---cCcccCcCCCcccchHHhhhc
Q 026540            2 TIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRAN---KQFAEEIQTRQYRAPEVILRA   78 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~---~~~~~~~~~~~~~~PE~~~~~   78 (237)
                      +++|.++..++.|++.||+|+|..+++||||||+|||++.++.+|++|||.+....   .......|++.|+|||++...
T Consensus        98 ~l~e~~~~~~~~qil~~L~yLH~~~IiHrDiKpeNIl~~~~~~~kl~DFG~a~~~~~~~~~~~~~~gt~~y~apE~~~~~  177 (298)
T d1gz8a_          98 GIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGC  177 (298)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSTTHHHHHCCCSBCTTCCBCCCTTCCHHHHTTC
T ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCEEccccCchheeecccCcceeccCCcceeccCCcccceeecccceeeehhhhccc
Confidence            47899999999999999999999999999999999999999999999999986543   234455889999999998877


Q ss_pred             C-CCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccC
Q 026540           79 G-YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKF  157 (237)
Q Consensus        79 ~-~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (237)
                      . ++.++|+||+||++++|++|+.||.+.      ....++..+.+..+.+....+........+....      .....
T Consensus       178 ~~~~~~~DiwSlGvily~m~~G~~Pf~~~------~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~  245 (298)
T d1gz8a_         178 KYYSTAVDIWSLGCIFAEMVTRRALFPGD------SEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF------PKWAR  245 (298)
T ss_dssp             SSCCTHHHHHHHHHHHHHHHHSSCSCCCS------SHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTS------CCCCC
T ss_pred             cCCCccccccccchhhhHHhhCCCCCCCC------CHHHHHHHHHHhcCCCchhhcccccccccccccc------ccccc
Confidence            6 588999999999999999999999866      4677888888888876655443222211111100      00011


Q ss_pred             CchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccCC
Q 026540          158 WSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNST  211 (237)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~~  211 (237)
                      ......       ....+.++.+|+.+||+.||.+|||++|+++||||+....+
T Consensus       246 ~~~~~~-------~~~~s~~~~dll~~mL~~dP~~R~t~~ell~H~ff~~~~~p  292 (298)
T d1gz8a_         246 QDFSKV-------VPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP  292 (298)
T ss_dssp             CCHHHH-------STTCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGTTCCCC
T ss_pred             cchhhh-------ccCCCHHHHHHHHHHccCChhHCcCHHHHhCCHhhccCCCC
Confidence            111111       12346789999999999999999999999999999877554

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=100.00  E-value=3.5e-38  Score=257.57  Aligned_cols=165  Identities=24%  Similarity=0.318  Sum_probs=135.1

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccC--CCCcEEEeecCcceecCc--CcccCcCCCcccchHHhhh
Q 026540            2 TIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDG--IDMRCKVVDFGNACRANK--QFAEEIQTRQYRAPEVILR   77 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~--~~~~~kl~dfg~~~~~~~--~~~~~~~~~~~~~PE~~~~   77 (237)
                      .|+|.+++.++.|++.||.|+|..+++||||||+|||++  .++.+||+|||++.....  ......+++.|+|||++.+
T Consensus       123 ~l~e~~~~~i~~qi~~aL~ylH~~~iiHRDiKp~NILl~~~~~~~vkL~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~  202 (352)
T d1koba_         123 KMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDR  202 (352)
T ss_dssp             CBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSCEEEECSSGGGCCHHHHTT
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCeeecccccccccccccCCCeEEEeecccceecCCCCceeeccCcccccCHHHHcC
Confidence            478999999999999999999999999999999999997  568999999999976553  2344578999999999999


Q ss_pred             cCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccC
Q 026540           78 AGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKF  157 (237)
Q Consensus        78 ~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (237)
                      ..++.++|+||+||++|+|++|..||.+.+      ....+..+.+....++                            
T Consensus       203 ~~~~~~~DiwSlGvilyelltG~~Pf~~~~------~~~~~~~i~~~~~~~~----------------------------  248 (352)
T d1koba_         203 EPVGFYTDMWAIGVLGYVLLSGLSPFAGED------DLETLQNVKRCDWEFD----------------------------  248 (352)
T ss_dssp             CCBCHHHHHHHHHHHHHHHHHSCCSSCCSS------HHHHHHHHHHCCCCCC----------------------------
T ss_pred             CCCCCccchHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHhCCCCCC----------------------------
Confidence            899999999999999999999999997653      3334433322211111                            


Q ss_pred             CchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccC
Q 026540          158 WSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNS  210 (237)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~  210 (237)
                                .......++++.+||.+||+.||.+|||++|+|+||||.+...
T Consensus       249 ----------~~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~Hp~~~~~~~  291 (352)
T d1koba_         249 ----------EDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHPWLKGDHS  291 (352)
T ss_dssp             ----------SSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTSTTTSSCCT
T ss_pred             ----------cccccCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhCCCcc
Confidence                      0112345778999999999999999999999999999986543

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=100.00  E-value=6.1e-38  Score=255.99  Aligned_cols=164  Identities=22%  Similarity=0.286  Sum_probs=134.0

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCC--CCcEEEeecCcceecCcC--cccCcCCCcccchHHhhhc
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGI--DMRCKVVDFGNACRANKQ--FAEEIQTRQYRAPEVILRA   78 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~--~~~~kl~dfg~~~~~~~~--~~~~~~~~~~~~PE~~~~~   78 (237)
                      ++|.++..++.|++.||.|+|+.+++||||||+|||++.  ++.+||+|||++......  .....||+.|+|||++.+.
T Consensus       121 l~e~~~~~i~~qi~~aL~ylH~~~iiHrDiKp~NIll~~~~~~~vkL~DFG~a~~~~~~~~~~~~~gT~~Y~aPEv~~~~  200 (350)
T d1koaa2         121 MSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGK  200 (350)
T ss_dssp             BCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTSCCEEECCCTTCEECCTTSCEEEECSCTTTCCHHHHHTC
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhcCCeeeeechhHeeeccCCCCeEEEeecchheecccccccceecCcccccCHHHHcCC
Confidence            789999999999999999999999999999999999964  578999999999765432  3346889999999999999


Q ss_pred             CCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCC
Q 026540           79 GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFW  158 (237)
Q Consensus        79 ~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (237)
                      .++.++|+||+||++|+|++|..||.+.+      ..+.+..+.+....++.                            
T Consensus       201 ~~~~~~DiwSlGvilyell~G~~Pf~~~~------~~~~~~~i~~~~~~~~~----------------------------  246 (350)
T d1koaa2         201 PVGYYTDMWSVGVLSYILLSGLSPFGGEN------DDETLRNVKSCDWNMDD----------------------------  246 (350)
T ss_dssp             CBCHHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHTCCCSCC----------------------------
T ss_pred             CCChhHhhhhhhHHHHHHHhCCCCCCCCC------HHHHHHHHHhCCCCCCc----------------------------
Confidence            99999999999999999999999997653      33444433222111110                            


Q ss_pred             chhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccC
Q 026540          159 SLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNS  210 (237)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~  210 (237)
                                .....+++++.+||.+||+.||++|||++|+|+||||+....
T Consensus       247 ----------~~~~~~s~~~~~li~~~L~~dP~~R~t~~eil~hp~~~~~~~  288 (350)
T d1koaa2         247 ----------SAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNA  288 (350)
T ss_dssp             ----------GGGGGCCHHHHHHHHHHCCSSGGGSCCHHHHHHSTTTSCTTC
T ss_pred             ----------ccccCCCHHHHHHHHHHccCChhHCcCHHHHhcCcccCCCCC
Confidence                      011234678999999999999999999999999999997654

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=6.6e-38  Score=249.71  Aligned_cols=187  Identities=23%  Similarity=0.293  Sum_probs=142.8

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC---cccCcCCCcccchHHhhhc
Q 026540            2 TIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ---FAEEIQTRQYRAPEVILRA   78 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~~~~PE~~~~~   78 (237)
                      .+++.++..++.|++.||.|+|..+++||||||+|||++.++.+|++|||.+......   .....+++.|++||.+.+.
T Consensus        96 ~l~~~~~~~i~~qi~~~L~~LH~~~IvHrDiKp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~y~~pE~~~~~  175 (286)
T d1ob3a_          96 GLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGS  175 (286)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC---------CCCTTCCHHHHTTC
T ss_pred             CcchhhhHHHHHHHHHHHHHhccCcEEecCCCCceeeEcCCCCEEecccccceecccCccccceecccchhhhHHHHhCC
Confidence            4789999999999999999999999999999999999999999999999998654322   3344678999999999875


Q ss_pred             -CCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccC
Q 026540           79 -GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKF  157 (237)
Q Consensus        79 -~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (237)
                       .++.++|+||+||++++|++|+.||.+.      .+.+++..+.+..+.++...+........+.......      ..
T Consensus       176 ~~~~~~~DiwslGv~l~el~~G~~pf~~~------~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~  243 (286)
T d1ob3a_         176 KKYSTTIDIWSVGCIFAEMVNGTPLFPGV------SEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVY------EP  243 (286)
T ss_dssp             CSCCTHHHHHHHHHHHHHHHHSSCSCCCS------SHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCC------CC
T ss_pred             CCCCcceeehhcCcHHHHHHHCCCCCCCC------CHHHHHHHHHHhhCCCChhhccchhhhhhcccccccc------cC
Confidence             4689999999999999999999999876      4778888888888877655443222211111100000      00


Q ss_pred             CchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCc
Q 026540          158 WSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSL  207 (237)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~  207 (237)
                      .+       ........++.+.+||.+||+.||++|||++|+|+||||++
T Consensus       244 ~~-------~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~ell~Hp~f~~  286 (286)
T d1ob3a_         244 LP-------WESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE  286 (286)
T ss_dssp             CC-------GGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGGC
T ss_pred             cc-------hhhhcccCCHHHHHHHHHHccCChhHCcCHHHHhcCcccCc
Confidence            00       11123345678999999999999999999999999999974

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.4e-38  Score=247.37  Aligned_cols=159  Identities=18%  Similarity=0.216  Sum_probs=125.8

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhhhc--CCccCCCCCccccC-CCCcEEEeecCcceecCc-CcccCcCCCcccchHHhhh
Q 026540            2 TIVEKKLKRRAKRAVANISIRRASM--GGIELPKPERCLDG-IDMRCKVVDFGNACRANK-QFAEEIQTRQYRAPEVILR   77 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~~~--~~h~d~kp~Nili~-~~~~~kl~dfg~~~~~~~-~~~~~~~~~~~~~PE~~~~   77 (237)
                      .+++..+..++.|++.||+|+|+.+  ++||||||+|||++ .++.+||+|||++..... ......||+.|+|||++.+
T Consensus       108 ~~~~~~~~~~~~qi~~gl~yLH~~~~~IiHrDiKp~NILl~~~~~~~Kl~DFGla~~~~~~~~~~~~GT~~Y~aPE~~~~  187 (270)
T d1t4ha_         108 VMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAVIGTPEFMAPEMYEE  187 (270)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCTTSBEESCSSCCCCCGGGGGT
T ss_pred             cccHHHHHHHHHHHHHHHHHHHHCCCCEEeCCcChhhceeeCCCCCEEEeecCcceeccCCccCCcccCccccCHHHhCC
Confidence            3678999999999999999999998  99999999999996 478999999999965443 3446689999999998864


Q ss_pred             cCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccC
Q 026540           78 AGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKF  157 (237)
Q Consensus        78 ~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (237)
                       .++.++||||+||++|+|++|..||....     ........+..  +..+.                           
T Consensus       188 -~~~~~~DIwSlGvilyel~~g~~Pf~~~~-----~~~~~~~~i~~--~~~~~---------------------------  232 (270)
T d1t4ha_         188 -KYDESVDVYAFGMCMLEMATSEYPYSECQ-----NAAQIYRRVTS--GVKPA---------------------------  232 (270)
T ss_dssp             -CCCTHHHHHHHHHHHHHHHHSSCTTTTCS-----SHHHHHHHHTT--TCCCG---------------------------
T ss_pred             -CCCCcCchhhHHHHHHHHHHCCCCCCCcc-----cHHHHHHHHHc--CCCCc---------------------------
Confidence             69999999999999999999999997542     11111111100  00000                           


Q ss_pred             CchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcC
Q 026540          158 WSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLS  206 (237)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~  206 (237)
                                 ..+...++++.+||.+||+.||++|||++|+|+||||+
T Consensus       233 -----------~~~~~~~~~~~~li~~~l~~dp~~R~s~~ell~Hp~fk  270 (270)
T d1t4ha_         233 -----------SFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQ  270 (270)
T ss_dssp             -----------GGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGC
T ss_pred             -----------ccCccCCHHHHHHHHHHccCCHhHCcCHHHHhCCcccC
Confidence                       01122356789999999999999999999999999995

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=5.2e-38  Score=252.24  Aligned_cols=164  Identities=24%  Similarity=0.314  Sum_probs=121.8

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccC---CCCcEEEeecCcceecC--cCcccCcCCCcccchHHhh
Q 026540            2 TIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDG---IDMRCKVVDFGNACRAN--KQFAEEIQTRQYRAPEVIL   76 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~---~~~~~kl~dfg~~~~~~--~~~~~~~~~~~~~~PE~~~   76 (237)
                      .++|.++..++.|++.||.|+|+.+++||||||+||++.   .++.+||+|||++....  ......+||+.|+|||++.
T Consensus       103 ~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~~~~~~~~~~~~~GT~~y~APE~~~  182 (307)
T d1a06a_         103 FYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLA  182 (307)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCC------------------CTTSCHHHHT
T ss_pred             CCCHHHHHHHHHHHHHHHHhhhhceeeeEEecccceeecccCCCceEEEeccceeEEccCCCeeeeeeeCccccCcHHHc
Confidence            378999999999999999999999999999999999995   47899999999996543  2334568999999999999


Q ss_pred             hcCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcccc
Q 026540           77 RAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLK  156 (237)
Q Consensus        77 ~~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (237)
                      +..++.++|+||+||++|+|++|..||.+..      .......+.+.-..+                            
T Consensus       183 ~~~~~~~~DiwSlGvilyell~g~~Pf~~~~------~~~~~~~i~~~~~~~----------------------------  228 (307)
T d1a06a_         183 QKPYSKAVDCWSIGVIAYILLCGYPPFYDEN------DAKLFEQILKAEYEF----------------------------  228 (307)
T ss_dssp             TCCCCTHHHHHHHHHHHHHHHHSSCSCCCSS------HHHHHHHHHTTCCCC----------------------------
T ss_pred             CCCCCcHHHhhhhhHHHHHHHhCCCCCCCCC------HHHHHHHHhccCCCC----------------------------
Confidence            9899999999999999999999999997652      222222221110000                            


Q ss_pred             CCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCccc
Q 026540          157 FWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRN  209 (237)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~  209 (237)
                                .......+++++.+||.+||+.||.+|||++|+++||||++..
T Consensus       229 ----------~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~hp~~~~~~  271 (307)
T d1a06a_         229 ----------DSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWIAGDT  271 (307)
T ss_dssp             ----------CTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHSTTTTSSC
T ss_pred             ----------CCccccCCCHHHHHHHHHHccCCHhHCcCHHHHhcCHhhCCCC
Confidence                      0011234567899999999999999999999999999998643

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.2e-38  Score=249.10  Aligned_cols=156  Identities=22%  Similarity=0.255  Sum_probs=120.6

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhc-----CCccCCCCCccccCCCCcEEEeecCcceecCc---CcccCcCCCcccchHH
Q 026540            3 IVEKKLKRRAKRAVANISIRRASM-----GGIELPKPERCLDGIDMRCKVVDFGNACRANK---QFAEEIQTRQYRAPEV   74 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~-----~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~---~~~~~~~~~~~~~PE~   74 (237)
                      ++|..+..++.|++.||+|+|+.+     ++||||||+|||++.++.+||+|||++.....   ......||+.|+|||+
T Consensus       106 l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~~~~~vkl~DFG~a~~~~~~~~~~~~~~gt~~Y~APE~  185 (269)
T d2java1         106 LDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGTPYYMSPEQ  185 (269)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEECTTSCEEECCHHHHHHC-----------CCCSCCCHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCcCCCCcEEEeeccceeecccCCCccccCCCCcccCCHHH
Confidence            678999999999999999999977     99999999999999999999999999865432   2335688999999999


Q ss_pred             hhhcCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcc
Q 026540           75 ILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRR  154 (237)
Q Consensus        75 ~~~~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (237)
                      +.+..++.++||||+||++|+|++|..||.+.+      ..+....+.+.  .                           
T Consensus       186 l~~~~~~~~~DIwSlGvilyel~tg~~Pf~~~~------~~~~~~~i~~~--~---------------------------  230 (269)
T d2java1         186 MNRMSYNEKSDIWSLGCLLYELCALMPPFTAFS------QKELAGKIREG--K---------------------------  230 (269)
T ss_dssp             HTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSS------HHHHHHHHHHT--C---------------------------
T ss_pred             HcCCCCChHHHHHhhCHHHHHHhhCCCCCCCCC------HHHHHHHHHcC--C---------------------------
Confidence            998899999999999999999999999997652      22222222110  0                           


Q ss_pred             ccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCc
Q 026540          155 LKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWL  205 (237)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f  205 (237)
                                  ....+..+++++.+||.+||+.||.+|||++|+++|||+
T Consensus       231 ------------~~~~~~~~s~~l~~li~~~L~~dp~~Rps~~ell~hp~i  269 (269)
T d2java1         231 ------------FRRIPYRYSDELNEIITRMLNLKDYHRPSVEEILENPLI  269 (269)
T ss_dssp             ------------CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTC
T ss_pred             ------------CCCCCcccCHHHHHHHHHHcCCChhHCcCHHHHHhCCcC
Confidence                        011233457789999999999999999999999999995

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.6e-38  Score=248.92  Aligned_cols=154  Identities=20%  Similarity=0.294  Sum_probs=128.3

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCC-CcEEEeecCcceecCc-CcccCcCCCcccchHHhhhcC
Q 026540            2 TIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGID-MRCKVVDFGNACRANK-QFAEEIQTRQYRAPEVILRAG   79 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~-~~~kl~dfg~~~~~~~-~~~~~~~~~~~~~PE~~~~~~   79 (237)
                      .++|.++..++.|++.||+|+|+.+++||||||+|||++.+ +.+||+|||++..... ......||+.|+|||++.+..
T Consensus       106 ~l~e~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NIll~~~~~~vkl~DFG~a~~~~~~~~~~~~GT~~y~aPE~~~~~~  185 (273)
T d1xwsa_         106 ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHR  185 (273)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEECCSSCBCCCCSCGGGSCHHHHHHSC
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCCccccCcccceEEecCCCeEEECccccceecccccccccccCCCcCCHHHHcCCC
Confidence            46899999999999999999999999999999999999854 7999999999976543 345678999999999998877


Q ss_pred             C-CchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCC
Q 026540           80 Y-SFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFW  158 (237)
Q Consensus        80 ~-~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (237)
                      + +.++|+||+||++|+|++|..||....            .+                                     
T Consensus       186 ~~~~~~DiwSlGvilyell~g~~Pf~~~~------------~i-------------------------------------  216 (273)
T d1xwsa_         186 YHGRSAAVWSLGILLYDMVCGDIPFEHDE------------EI-------------------------------------  216 (273)
T ss_dssp             BCHHHHHHHHHHHHHHHHHHSSCSCCSHH------------HH-------------------------------------
T ss_pred             CCCcccccccceeeehhHhhCCCCCCCch------------HH-------------------------------------
Confidence            5 677899999999999999999996321            00                                     


Q ss_pred             chhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCccc
Q 026540          159 SLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRN  209 (237)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~  209 (237)
                           .......+..+++++.+||.+||+.||++|||++|+++||||+...
T Consensus       217 -----~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~hp~~~~~~  262 (273)
T d1xwsa_         217 -----IRGQVFFRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVL  262 (273)
T ss_dssp             -----HHCCCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSCC
T ss_pred             -----hhcccCCCCCCCHHHHHHHHHHccCCHhHCcCHHHHhcCHhhCCCC
Confidence                 0111122334578899999999999999999999999999998654

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.5e-37  Score=252.08  Aligned_cols=190  Identities=24%  Similarity=0.306  Sum_probs=149.0

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCC-cEEEeecCcceecC--cCcccCcCCCcccchHHhhhc
Q 026540            2 TIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDM-RCKVVDFGNACRAN--KQFAEEIQTRQYRAPEVILRA   78 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~-~~kl~dfg~~~~~~--~~~~~~~~~~~~~~PE~~~~~   78 (237)
                      .+++.+++.++.|++.||+|+|+.+|+||||||+|||++.++ .+||+|||++....  .......|+..|+|||.+.+.
T Consensus       118 ~l~~~~~~~i~~qil~aL~yLH~~~IiHrDiKp~NILl~~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~  197 (350)
T d1q5ka_         118 TLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGA  197 (350)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTTCCEEECCCTTCEECCTTSCCCSCCSCTTSCCHHHHTTC
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCcceEEEecCCCceeEecccchhhccCCcccccccccccccChHHhhcc
Confidence            478999999999999999999999999999999999999775 89999999987643  334556889999999998865


Q ss_pred             -CCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccC
Q 026540           79 -GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKF  157 (237)
Q Consensus        79 -~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (237)
                       .++.++|+||+||+++++++|..||...      ...+++..+.+..|.++...+...........       ......
T Consensus       198 ~~~~~~~DIwSlG~il~el~~g~~pf~~~------~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~-------~~~~~~  264 (350)
T d1q5ka_         198 TDYTSSIDVWSAGCVLAELLLGQPIFPGD------SGVDQLVEIIKVLGTPTREQIREMNPNYTEFK-------FPQIKA  264 (350)
T ss_dssp             SSCCTHHHHHHHHHHHHHHHHTSCSSCCS------SHHHHHHHHHHHHCCCCHHHHHHHCC---CCC-------CCCCCC
T ss_pred             cCCCcceeecccceEEEehhhCCCCCCCC------CHHHHHHHHHHHhCCChHHhhhhhccchhhcc-------cccccc
Confidence             6899999999999999999999999766      47788899999999988776643222111000       000000


Q ss_pred             CchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccC
Q 026540          158 WSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNS  210 (237)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~  210 (237)
                      .+...      ......++++.+||.+||++||++|||+.|+|+||||.....
T Consensus       265 ~~~~~------~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~~~  311 (350)
T d1q5ka_         265 HPWTK------VFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRD  311 (350)
T ss_dssp             CCGGG------TSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGGGGC
T ss_pred             Cchhh------hcccCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhccccC
Confidence            01111      112345678999999999999999999999999999987643

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=7e-38  Score=251.63  Aligned_cols=160  Identities=23%  Similarity=0.232  Sum_probs=130.3

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcCcccCcCCCcccchHHhhh---c
Q 026540            2 TIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILR---A   78 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~PE~~~~---~   78 (237)
                      .+++.++..++.|++.||.|+|..+++||||||+|||++.++.+||+|||++...... ....||+.|+|||++.+   .
T Consensus       111 ~l~e~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~~~~~~Kl~DFG~a~~~~~~-~~~~GT~~Y~APE~~~~~~~~  189 (309)
T d1u5ra_         111 PLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA-NSFVGTPYWMAPEVILAMDEG  189 (309)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSB-CCCCSCGGGCCHHHHTTTTSC
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEECCCCCEEEeecccccccCCC-CccccCccccCHHHHhccCCC
Confidence            4789999999999999999999999999999999999999999999999999765443 45689999999999974   3


Q ss_pred             CCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCC
Q 026540           79 GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFW  158 (237)
Q Consensus        79 ~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (237)
                      .|+.++||||+||++|+|++|..||.+..      ....+..+...  ..+                             
T Consensus       190 ~y~~~~DiwSlGvilyel~~g~~Pf~~~~------~~~~~~~i~~~--~~~-----------------------------  232 (309)
T d1u5ra_         190 QYDGKVDVWSLGITCIELAERKPPLFNMN------AMSALYHIAQN--ESP-----------------------------  232 (309)
T ss_dssp             CBCTHHHHHHHHHHHHHHHHSSCTTTTSC------HHHHHHHHHHS--CCC-----------------------------
T ss_pred             CcCchhhhhhHHHHHHHHHHCCCCCCCCC------HHHHHHHHHhC--CCC-----------------------------
Confidence            58899999999999999999999997653      22222222110  000                             


Q ss_pred             chhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcc
Q 026540          159 SLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLR  208 (237)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~  208 (237)
                               ...+...++++.+||.+||+.||.+|||++|+|+||||...
T Consensus       233 ---------~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~Hp~~~~~  273 (309)
T d1u5ra_         233 ---------ALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRE  273 (309)
T ss_dssp             ---------CCSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTCHHHHSC
T ss_pred             ---------CCCCCCCCHHHHHHHHHHCcCChhHCcCHHHHHhCHHhcCC
Confidence                     00122346789999999999999999999999999999854

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=1.4e-37  Score=255.19  Aligned_cols=163  Identities=21%  Similarity=0.301  Sum_probs=133.0

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCc-CcccCcCCCcccchHHhhhc-CC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK-QFAEEIQTRQYRAPEVILRA-GY   80 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~-~~~~~~~~~~~~~PE~~~~~-~~   80 (237)
                      ++|.++..++.|++.||.|+|..+++||||||+|||++.++.+||+|||++..... ......||+.|+|||++..+ .+
T Consensus       104 ~~e~~~~~~~~qi~~aL~ylH~~~iiHrDlKP~NILl~~~g~iKl~DFGla~~~~~~~~~~~~GT~~y~APE~~~~~~~~  183 (364)
T d1omwa3         104 FSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAY  183 (364)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECSSSCEEECCCTTCEECSSSCCCSCCSCGGGCCHHHHSTTCCC
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHCCccceeeccceeEEcCCCcEEEeeeceeeecCCCcccccccccccchhHHhhcCCCC
Confidence            57899999999999999999999999999999999999999999999999976543 34456899999999999754 68


Q ss_pred             CchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCch
Q 026540           81 SFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSL  160 (237)
Q Consensus        81 ~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (237)
                      +.++|+||+||++|+|++|..||.+....    .  .. .+.+..                                   
T Consensus       184 ~~~~DiwSlGvilyemltG~~Pf~~~~~~----~--~~-~~~~~~-----------------------------------  221 (364)
T d1omwa3         184 DSSADWFSLGCMLFKLLRGHSPFRQHKTK----D--KH-EIDRMT-----------------------------------  221 (364)
T ss_dssp             CTHHHHHHHHHHHHHHHHSSCSSCSSCSS----C--HH-HHHHHS-----------------------------------
T ss_pred             CcccchhHHHHHHHHHHhCCCCCCCCCHH----H--HH-HHHHhc-----------------------------------
Confidence            99999999999999999999999765311    0  11 111110                                   


Q ss_pred             hHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCC-----HHHHhcCCCcCcccC
Q 026540          161 DRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPT-----AQQCLQHPWLSLRNS  210 (237)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t-----~~ell~hp~f~~~~~  210 (237)
                         .......+..+++++.+||.+||+.||.+|||     ++|+++||||++.++
T Consensus       222 ---~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~a~eil~Hp~f~~i~~  273 (364)
T d1omwa3         222 ---LTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDW  273 (364)
T ss_dssp             ---SSCCCCCCSSSCHHHHHHHHHHTCSSTTTSTTTSSSTHHHHHTSGGGTTCCH
T ss_pred             ---ccCCCCCCCCCCHHHHHHHHHHcccCHHHhCCCcccCHHHHHcCccccCCCH
Confidence               01112234456788999999999999999999     799999999998754

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.6e-37  Score=246.93  Aligned_cols=168  Identities=23%  Similarity=0.341  Sum_probs=131.9

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCC----cEEEeecCcceecC--cCcccCcCCCcccchHHh
Q 026540            2 TIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDM----RCKVVDFGNACRAN--KQFAEEIQTRQYRAPEVI   75 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~----~~kl~dfg~~~~~~--~~~~~~~~~~~~~~PE~~   75 (237)
                      .+++.++..++.|++.||+|+|+.+++||||||+||+++.++    .+|++|||++....  .......+++.|+|||++
T Consensus       109 ~l~~~~~~~~~~qi~~al~yLH~~~ivHrDiKp~Nill~~~~~~~~~vkl~DfG~a~~~~~~~~~~~~~~t~~y~APE~~  188 (293)
T d1jksa_         109 SLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIV  188 (293)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSSSSSCCEEECCCTTCEECTTSCBCSCCCCCGGGCCHHHH
T ss_pred             ccchhHHHHHHHHHHHHHHhhhhcceeecccccceEEEecCCCcccceEecchhhhhhcCCCccccccCCCCcccCHHHH
Confidence            378999999999999999999999999999999999998765    59999999997654  334456789999999999


Q ss_pred             hhcCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccc
Q 026540           76 LRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRL  155 (237)
Q Consensus        76 ~~~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (237)
                      .+..++.++|+||+||++|+|++|..||.+.+      ....+..+.+.-...+...                       
T Consensus       189 ~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~------~~~~~~~i~~~~~~~~~~~-----------------------  239 (293)
T d1jksa_         189 NYEPLGLEADMWSIGVITYILLSGASPFLGDT------KQETLANVSAVNYEFEDEY-----------------------  239 (293)
T ss_dssp             TTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHTTCCCCCHHH-----------------------
T ss_pred             cCCCCCCcccchhhhHHHHHHHcCCCCCCCCC------HHHHHHHHHhcCCCCCchh-----------------------
Confidence            98889999999999999999999999998653      3333333322111111100                       


Q ss_pred             cCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccCCcc
Q 026540          156 KFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNSTRD  213 (237)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~~~~  213 (237)
                                     +...+..+.+||.+||+.||.+|||++|+++||||+..++...
T Consensus       240 ---------------~~~~s~~~~~li~~~L~~dP~~R~s~~eil~hp~~~~~~~~~~  282 (293)
T d1jksa_         240 ---------------FSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQA  282 (293)
T ss_dssp             ---------------HTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSTTTCC------
T ss_pred             ---------------cCCCCHHHHHHHHHHccCChhHCcCHHHHhcCcccCCCChhHh
Confidence                           1134678899999999999999999999999999987665433

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.6e-38  Score=252.68  Aligned_cols=161  Identities=24%  Similarity=0.273  Sum_probs=134.6

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecC---cCcccCcCCCcccchHHhhhc
Q 026540            2 TIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRAN---KQFAEEIQTRQYRAPEVILRA   78 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~---~~~~~~~~~~~~~~PE~~~~~   78 (237)
                      .++|.+++.++.|++.||+|+|+.+++||||||+|||++.++.+||+|||++....   .......||+.|+|||++.+.
T Consensus        99 ~~~e~~~~~~~~qi~~al~ylH~~~iiHrDikp~NiL~~~~~~~kl~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~  178 (320)
T d1xjda_          99 KFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNTFCGTPDYIAPEILLGQ  178 (320)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTCCBCCCCSCGGGCCHHHHTTC
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCcccceeecCCCceeccccchhhhcccccccccccCCCCCcCCHHHHcCC
Confidence            36789999999999999999999999999999999999999999999999986543   233456889999999999999


Q ss_pred             CCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCC
Q 026540           79 GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFW  158 (237)
Q Consensus        79 ~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (237)
                      .++.++|+||+||++|+|++|..||.+.+      .......+.                                    
T Consensus       179 ~~~~~~DiwSlGvilyemltG~~PF~~~~------~~~~~~~i~------------------------------------  216 (320)
T d1xjda_         179 KYNHSVDWWSFGVLLYEMLIGQSPFHGQD------EEELFHSIR------------------------------------  216 (320)
T ss_dssp             CBCTHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHH------------------------------------
T ss_pred             CCCchhhhhhhhHHHHHHHhCCCCCCCCC------HHHHHHHHH------------------------------------
Confidence            99999999999999999999999997653      222222221                                    


Q ss_pred             chhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHH-HHhcCCCcCcccC
Q 026540          159 SLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQ-QCLQHPWLSLRNS  210 (237)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~-ell~hp~f~~~~~  210 (237)
                            ......+..+++++.+||.+||+.||.+|||+. ++++||||++.++
T Consensus       217 ------~~~~~~p~~~s~~~~dli~~~L~~dP~~R~s~~~~l~~hpff~~~~~  263 (320)
T d1xjda_         217 ------MDNPFYPRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFREINW  263 (320)
T ss_dssp             ------HCCCCCCTTSCHHHHHHHHHHSCSSGGGSBTTBSCGGGSGGGTTCCH
T ss_pred             ------cCCCCCCccCCHHHHHHHHHhcccCCCCCcCHHHHHHhCchhccCCH
Confidence                  112223445678899999999999999999996 8999999998643

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.9e-37  Score=246.62  Aligned_cols=189  Identities=19%  Similarity=0.230  Sum_probs=144.0

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCc-------CcccCcCCCcccchHHh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK-------QFAEEIQTRQYRAPEVI   75 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~-------~~~~~~~~~~~~~PE~~   75 (237)
                      +++.+++.+++|++.||+|+|+.+++||||||+|||++.++.+|++|||++.....       .....+||+.|+|||++
T Consensus       114 ~~~~~~~~i~~qil~~l~~lH~~~ivHrDlKp~NILl~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~gT~~Y~aPE~~  193 (318)
T d3blha1         114 FTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELL  193 (318)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECCC-----CCCCCSCCSCGGGCCHHHH
T ss_pred             cccHHHHHHHHHHHHHHHHhccCCEEecCcCchheeecCCCcEEeeecceeeecccccccccccccceecCHHHhhHHHH
Confidence            56888999999999999999999999999999999999999999999999865431       22334789999999999


Q ss_pred             hhc-CCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcc
Q 026540           76 LRA-GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRR  154 (237)
Q Consensus        76 ~~~-~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (237)
                      .+. .++.++|+||+||+++++++|+.||.+.      .+...+..+.+..+.++............+..... .   . 
T Consensus       194 ~~~~~~~~k~DiwSlGvil~el~~g~~pf~~~------~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~-  262 (318)
T d3blha1         194 LGERDYGPPIDLWGAGCIMAEMWTRSPIMQGN------TEQHQLALISQLCGSITPEVWPNVDNYELYEKLEL-V---K-  262 (318)
T ss_dssp             TTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCS------SHHHHHHHHHHHHCCCCTTTSTTCCCC-------C-C---S-
T ss_pred             cCCCCCCcHHHcccCCceeeeHhhCCCCCCCC------CHHHHHHHHHHhcCCCChhhccccchhhhhhhhcc-c---c-
Confidence            866 6899999999999999999999999866      47888888999998887665433222111110000 0   0 


Q ss_pred             ccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCc
Q 026540          155 LKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSL  207 (237)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~  207 (237)
                      ...........     ....++.+.+||.+||++||++|||++|+|+||||..
T Consensus       263 ~~~~~~~~~~~-----~~~~~~~~~dLl~~mL~~dP~~R~sa~elL~Hpff~~  310 (318)
T d3blha1         263 GQKRKVKDRLK-----AYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWS  310 (318)
T ss_dssp             SCCBCHHHHHH-----HHHCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGSS
T ss_pred             cccccchhhhc-----cccCCHHHHHHHHHHCcCChhHCcCHHHHHcChhhcc
Confidence            00011111111     1122467889999999999999999999999999984

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.4e-37  Score=250.56  Aligned_cols=195  Identities=24%  Similarity=0.355  Sum_probs=144.3

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecC--cCcccCcCCCcccchHHhhhcCC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRAN--KQFAEEIQTRQYRAPEVILRAGY   80 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~--~~~~~~~~~~~~~~PE~~~~~~~   80 (237)
                      +++.+++.+++|++.||+|+|..+++||||||+|||++.++.++++|||++....  .......+|+.|+|||++.+..+
T Consensus       116 ~~~~~i~~~~~qil~gl~~LH~~giiHrDlKP~Nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~t~~y~aPE~l~~~~~  195 (355)
T d2b1pa1         116 LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGY  195 (355)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCCCC---------------CCTTCCHHHHTTCCC
T ss_pred             CCHHHHHHHHHHHHHHHHHhhhcccccccCCccccccccccceeeechhhhhccccccccccccccccccChhhhcCCCC
Confidence            6789999999999999999999999999999999999999999999999875443  23445578999999999999899


Q ss_pred             CchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchh-hhcccCccchhccccCCc
Q 026540           81 SFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKD-YFDRHGDLKRIRRLKFWS  159 (237)
Q Consensus        81 ~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~  159 (237)
                      +.++|+||+||+++++++|+.||.+.      ....+...+.+..+.+....+........ +..........      .
T Consensus       196 ~~~~DiwSlG~~l~ell~g~~pF~~~------~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~  263 (355)
T d2b1pa1         196 KENVDIWSVGCIMGEMVRHKILFPGR------DYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGL------T  263 (355)
T ss_dssp             CTTHHHHHHHHHHHHHHHSSCSSCCS------SHHHHHHHHHHHHCCCCHHHHTTSCHHHHHHHHTSCCCCCC------C
T ss_pred             CCCcccccccchHHHHhhCCCCCCCC------CHHHHHHHHHHhccCCCHHHHHHhhhhHHHHhhcCcccccc------c
Confidence            99999999999999999999999876      47888888888888877776654333221 11111110000      0


Q ss_pred             hhHHhhh-----hcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCccc
Q 026540          160 LDRLLVD-----KYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRN  209 (237)
Q Consensus       160 ~~~~~~~-----~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~  209 (237)
                      .......     ........+.++.+||.+||++||++||||+|||+||||+.+.
T Consensus       264 ~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~ta~elL~Hpw~~~~~  318 (355)
T d2b1pa1         264 FPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWY  318 (355)
T ss_dssp             HHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTGGGC
T ss_pred             cccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcCcccCCCC
Confidence            0110000     0011234578899999999999999999999999999999753

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=100.00  E-value=7.6e-37  Score=248.02  Aligned_cols=196  Identities=17%  Similarity=0.289  Sum_probs=143.8

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCC-CcEEEeecCcceecC--cCcccCcCCCcccchHHhhhc
Q 026540            2 TIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGID-MRCKVVDFGNACRAN--KQFAEEIQTRQYRAPEVILRA   78 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~-~~~kl~dfg~~~~~~--~~~~~~~~~~~~~~PE~~~~~   78 (237)
                      .++|.+++.+++|++.||.|+|+.+++||||||+|||++.+ ..++++|||++....  .......+|+.|+|||.+.+.
T Consensus       125 ~l~e~~i~~i~~qil~aL~~LH~~gIvHrDiKp~NILi~~~~~~vkl~DFG~a~~~~~~~~~~~~~~t~~y~aPE~~~~~  204 (328)
T d3bqca1         125 TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDY  204 (328)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCGGGCEECCTTCCCCSCCSCGGGCCHHHHTTC
T ss_pred             CCCHHHHHHHHHHHHHHHHHHhhcccccccccccceEEcCCCCeeeecccccceeccCCCcccccccCccccCcccccCC
Confidence            46899999999999999999999999999999999999865 469999999997654  334566789999999999876


Q ss_pred             C-CCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhc--CCC-chhhhcccCccchhcc
Q 026540           79 G-YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIG--GAQ-SKDYFDRHGDLKRIRR  154 (237)
Q Consensus        79 ~-~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~  154 (237)
                      . ++.++|+||+||+++++++|..||....     ....+...+.+.+|.+.......  ... ...+....+..     
T Consensus       205 ~~~~~~~DiwslG~~l~e~~~g~~pf~~~~-----~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-----  274 (328)
T d3bqca1         205 QMYDYSLDMWSLGCMLASMIFRKEPFFHGH-----DNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRH-----  274 (328)
T ss_dssp             CCCCTHHHHHHHHHHHHHHHHTCSSSSCCS-----SHHHHHHHHHHHHCHHHHHHHHHHTTCCCCGGGGGTCCCC-----
T ss_pred             CCCCcccchhhhhhhhHHhccCCCCCCCCc-----hhHHHHHHHHHHHCCchhhhhhhhcccccCcccchhcccc-----
Confidence            4 7999999999999999999999997654     56667777777776533222211  111 10110000000     


Q ss_pred             ccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccC
Q 026540          155 LKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNS  210 (237)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~  210 (237)
                       .........  .......+++++.+||.+||++||++|||++|+|+||||....+
T Consensus       275 -~~~~~~~~~--~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~e~L~Hp~F~~v~~  327 (328)
T d3bqca1         275 -SRKRWERFV--HSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVVK  327 (328)
T ss_dssp             -CCCCGGGGC--CTTTGGGCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTSCC
T ss_pred             -cccchhhcc--cccccccCCHHHHHHHHHHccCChhHCcCHHHHhcCcccCCCCC
Confidence             000011110  11122345778999999999999999999999999999997654

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.4e-36  Score=246.65  Aligned_cols=196  Identities=24%  Similarity=0.317  Sum_probs=147.9

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCc------CcccCcCCCcccchHHh
Q 026540            2 TIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK------QFAEEIQTRQYRAPEVI   75 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~------~~~~~~~~~~~~~PE~~   75 (237)
                      ++++.+++.++.|++.||+|+|..+++||||||+|||++.++.+||+|||++.....      .....+|++.|+|||++
T Consensus       105 ~l~~~~i~~i~~qil~al~yLH~~~iiHRDIKp~NILl~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~gt~~y~aPE~l  184 (345)
T d1pmea_         105 HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM  184 (345)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCGGGCBCCTTCCCCSCGGGCCGGGT
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCcceEEECCCCCEEEcccCceeeccCCCccceeeccccccceechHHHh
Confidence            478999999999999999999999999999999999999999999999999865432      23455789999999998


Q ss_pred             hhc-CCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcc
Q 026540           76 LRA-GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRR  154 (237)
Q Consensus        76 ~~~-~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (237)
                      ... .++.++|+||+||++++|++|..||.+.      ...++...+....+.+..................    ....
T Consensus       185 ~~~~~~~~~~DiwSlG~il~eml~g~~pf~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~  254 (345)
T d1pmea_         185 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGK------HYLDQLNHILGILGSPSQEDLNCIINLKARNYLL----SLPH  254 (345)
T ss_dssp             TTBCSCSTHHHHHHHHHHHHHHHHSSCSCCCS------SHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHH----TSCC
T ss_pred             hcCCCCCchhhhhccCceehHHhhCCCCCCCC------CHHHHHHHHhhhccCCChhhhhhhhhhhhhcccc----cCCc
Confidence            655 5789999999999999999999999876      4667777777877777665543322221110000    0000


Q ss_pred             ccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccCCccc
Q 026540          155 LKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNSTRDE  214 (237)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~~~~~  214 (237)
                      ....+....       ....+..+.+|+.+||+.||.+|||++|+|+||||........+
T Consensus       255 ~~~~~~~~~-------~~~~s~~~~~li~~~L~~dP~~R~ta~e~L~hpf~~~~~~~~~~  307 (345)
T d1pmea_         255 KNKVPWNRL-------FPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDE  307 (345)
T ss_dssp             CCCCCHHHH-------CTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTTTCCGGGS
T ss_pred             cCCCCHHHh-------CCCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhccCCCCccC
Confidence            000111111       12345678999999999999999999999999999976554433

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.5e-37  Score=250.24  Aligned_cols=169  Identities=24%  Similarity=0.263  Sum_probs=130.4

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCC---CCcEEEeecCcceecC--cCcccCcCCCcccchHHhh
Q 026540            2 TIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGI---DMRCKVVDFGNACRAN--KQFAEEIQTRQYRAPEVIL   76 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~---~~~~kl~dfg~~~~~~--~~~~~~~~~~~~~~PE~~~   76 (237)
                      .|+|.+++.++.|++.||.|+|..+++||||||+|||++.   .+.+||+|||++....  .......||+.|+|||++.
T Consensus       107 ~l~e~~~~~i~~qi~~al~ylH~~~iiHRDiKp~NIll~~~~~~~~~Kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~  186 (335)
T d2ozaa1         107 AFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLG  186 (335)
T ss_dssp             CEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSSTTCCEEECCCTTCEECCCCCCCCCCSCCCSSCCCCCCC
T ss_pred             CcCHHHHHHHHHHHHHHHHHHHHcCCccccccccccccccccccccccccccceeeeccCCCccccccCCcccCCcHHHc
Confidence            4789999999999999999999999999999999999975   4679999999997543  3345668899999999999


Q ss_pred             hcCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcccc
Q 026540           77 RAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLK  156 (237)
Q Consensus        77 ~~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (237)
                      +..++.++|+||+||++|+|++|+.||.+.....      ....+....           ..        +.       .
T Consensus       187 ~~~y~~~~DiwSlGvily~lltg~~Pf~~~~~~~------~~~~~~~~i-----------~~--------~~-------~  234 (335)
T d2ozaa1         187 PEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLA------ISPGMKTRI-----------RM--------GQ-------Y  234 (335)
T ss_dssp             GGGGSHHHHHHHHHHHHHHHTTSSCSCEETTCC--------------CC-----------CS--------CS-------S
T ss_pred             CCCCCHHHHHHhhchhHHHHhhCCCCCCCCCHHH------HHHHHHHHH-----------hc--------CC-------C
Confidence            8889999999999999999999999998664211      000000000           00        00       0


Q ss_pred             CCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccC
Q 026540          157 FWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNS  210 (237)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~  210 (237)
                      ..+.        .....+++++.+||.+||+.||++|||+.|+++||||.....
T Consensus       235 ~~~~--------~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~hp~~~~~~~  280 (335)
T d2ozaa1         235 EFPN--------PEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTK  280 (335)
T ss_dssp             SCCT--------THHHHSCHHHHHHHHHHSCSSTTTSCCHHHHHHSHHHHTTTS
T ss_pred             CCCC--------cccccCCHHHHHHHHHHccCChhHCcCHHHHHcCHHhhCCCC
Confidence            0000        001235678999999999999999999999999999975543

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=100.00  E-value=3.6e-36  Score=238.15  Aligned_cols=163  Identities=26%  Similarity=0.340  Sum_probs=131.7

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCc--CcccCcCCCcccchHHhhhc-
Q 026540            2 TIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK--QFAEEIQTRQYRAPEVILRA-   78 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~--~~~~~~~~~~~~~PE~~~~~-   78 (237)
                      .++|.+++.++.|++.||+|+|..+++||||||+|||++.++.+||+|||++.....  ......||..|++||.+.+. 
T Consensus       106 ~l~e~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~~PE~~~~~~  185 (277)
T d1phka_         106 TLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSM  185 (277)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECCTTCCBCCCCSCGGGCCHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceEEEcCCCCeEEccchheeEccCCCceeeeeccCCCCCHHHhhccc
Confidence            368999999999999999999999999999999999999999999999999976543  34456789999999999743 


Q ss_pred             -----CCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhc
Q 026540           79 -----GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIR  153 (237)
Q Consensus        79 -----~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (237)
                           .++.++|+||+||++++|++|+.||.+..      .......+.+.--.++                        
T Consensus       186 ~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~~~------~~~~~~~i~~~~~~~~------------------------  235 (277)
T d1phka_         186 NDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRK------QMLMLRMIMSGNYQFG------------------------  235 (277)
T ss_dssp             CTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHHHHHTCCCCC------------------------
T ss_pred             cccCCCCCchheEcccchhhhhhccCCCCCCCCC------HHHHHHHHHhCCCCCC------------------------
Confidence                 36789999999999999999999998653      3333333322100000                        


Q ss_pred             cccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcc
Q 026540          154 RLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLR  208 (237)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~  208 (237)
                                    ......+++++.+|+.+||+.||.+|||++|+++||||+..
T Consensus       236 --------------~~~~~~~s~~~~~li~~~L~~~p~~R~s~~eil~h~~~~~~  276 (277)
T d1phka_         236 --------------SPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQY  276 (277)
T ss_dssp             --------------TTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGCTT
T ss_pred             --------------CcccccCCHHHHHHHHHHccCChhHCcCHHHHHcCHHHHHh
Confidence                          00122457889999999999999999999999999999853

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.3e-36  Score=238.06  Aligned_cols=190  Identities=23%  Similarity=0.288  Sum_probs=143.7

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC---cccCcCCCcccchHHhhhc
Q 026540            2 TIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ---FAEEIQTRQYRAPEVILRA   78 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~~~~PE~~~~~   78 (237)
                      .+++.++..+++|++.||+|+|..+++||||||+|||++.++.+|++|||.+......   .....++..|++||.+...
T Consensus        97 ~~~~~~~~~~~~q~~~aL~~lH~~~IvHrDiKP~NIli~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~pe~~~~~  176 (292)
T d1unla_          97 DLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGA  176 (292)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSCCSCCCSCCSCGGGCCHHHHTTC
T ss_pred             ccchhHHHHHHHHHHHHHHHhhcCCEeeecccCcccccccCCceeeeecchhhcccCCCccceeeccccchhhhhHhccC
Confidence            3578899999999999999999999999999999999999999999999999765432   2334567889999998876


Q ss_pred             C-CCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccC
Q 026540           79 G-YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKF  157 (237)
Q Consensus        79 ~-~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (237)
                      . ++.++|+||+||++++|++|+.||....     +..+++..+....+.+....+........+...          ..
T Consensus       177 ~~~~~~~DiwSlG~il~ell~g~~p~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~  241 (292)
T d1unla_         177 KLYSTSIDMWSAGCIFAELANAGRPLFPGN-----DVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPY----------PM  241 (292)
T ss_dssp             SCCCTHHHHHHHHHHHHHHTTTSCCSCCCS-----SHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCC----------CC
T ss_pred             CCCCchhhccccchHHHHHhhCCCCCCCCC-----CHHHHHHHHHhhcCCCChhhhhhhhhccccccc----------cc
Confidence            5 6899999999999999999999876543     566777777777777665433221111111000          00


Q ss_pred             CchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCccc
Q 026540          158 WSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRN  209 (237)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~  209 (237)
                      ..   ............++.+.+||.+||+.||.+||||+|+|+||||++..
T Consensus       242 ~~---~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~sa~e~L~Hp~f~~~~  290 (292)
T d1unla_         242 YP---ATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDFC  290 (292)
T ss_dssp             CC---TTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGSSCS
T ss_pred             cc---ccchhhhccccCCHHHHHHHHHHccCChhHCcCHHHHhcChhhcCCC
Confidence            00   00011122344567899999999999999999999999999998653

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.5e-36  Score=245.95  Aligned_cols=195  Identities=22%  Similarity=0.314  Sum_probs=150.1

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcCcccCcCCCcccchHHhhhcC-C
Q 026540            2 TIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAG-Y   80 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~PE~~~~~~-~   80 (237)
                      .++|.+++.+++|++.||.|+|+.+++||||||+|||++.++.+|++|||++...........|++.|+|||.+.+.. +
T Consensus       117 ~l~e~~~~~i~~qil~aL~~LH~~giiHrDiKp~NILi~~~~~~kl~dfg~a~~~~~~~~~~~g~~~y~apE~~~~~~~~  196 (348)
T d2gfsa1         117 KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHY  196 (348)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCC----CCTGGGSSSCHHHHTSCHHHHTTCSCC
T ss_pred             cccHHHHHHHHHHHHHHHHHHHhCCCcccccCCccccccccccccccccchhcccCcccccccccccccCchhhcCCccC
Confidence            378999999999999999999999999999999999999999999999999987777667778899999999988765 6


Q ss_pred             CchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCch
Q 026540           81 SFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSL  160 (237)
Q Consensus        81 ~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (237)
                      +.++|+||+||++++|++|..||.+.      ........+.+..+.++..................    ........+
T Consensus       197 ~~~~DiwSlGv~l~~ll~g~~pF~~~------~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~  266 (348)
T d2gfsa1         197 NQTVDIWSVGCIMAELLTGRTLFPGT------DHIDQLKLILRLVGTPGAELLKKISSESARNYIQS----LTQMPKMNF  266 (348)
T ss_dssp             CTTHHHHHHHHHHHHHHHSSCSCCCS------SHHHHHHHHHHHHCCCCHHHHTTCCCHHHHHHHTT----SCCCCCCCH
T ss_pred             CcccchhhhhHHHHHHHhCCCCCCCC------CHHHHHHHHHHhcCCCChHHhhhccchhhhhhhhh----cccCCCcch
Confidence            88999999999999999999999876      47788888888888877776543332211100000    000001111


Q ss_pred             hHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcccCCcc
Q 026540          161 DRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLRNSTRD  213 (237)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~~~~~  213 (237)
                      ...       ....++.+.+||.+||+.||.+|||++|+|+||||++......
T Consensus       267 ~~~-------~~~~s~~~~dli~~mL~~dP~~R~ta~elL~Hp~f~~~~~~~~  312 (348)
T d2gfsa1         267 ANV-------FIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDD  312 (348)
T ss_dssp             HHH-------STTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTTCCTTS
T ss_pred             hhh-------cCCCCHHHHHHHHHHCcCChhhCcCHHHHhcCHhhCCCCCCcc
Confidence            111       1234678899999999999999999999999999998755443

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7e-36  Score=241.27  Aligned_cols=163  Identities=22%  Similarity=0.314  Sum_probs=131.8

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCC--CcEEEeecCcceecCc--CcccCcCCCcccchHHhhh
Q 026540            2 TIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGID--MRCKVVDFGNACRANK--QFAEEIQTRQYRAPEVILR   77 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~--~~~kl~dfg~~~~~~~--~~~~~~~~~~~~~PE~~~~   77 (237)
                      .++|++++.++.|++.||.|+|..+++||||||+|||++.+  ..+|++|||++.....  ......+++.|++||.+.+
T Consensus        98 ~l~e~~~~~i~~qi~~al~yLH~~~iiHrDlKp~NIll~~~~~~~ikl~DFG~~~~~~~~~~~~~~~~t~~y~ape~~~~  177 (321)
T d1tkia_          98 ELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQH  177 (321)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCEEEEEESCGGGSCHHHHTT
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHcCCCcccccccceeecCCCceEEEEcccchhhccccCCcccccccccccccchhccC
Confidence            47899999999999999999999999999999999999854  5899999999876543  2344577899999999998


Q ss_pred             cCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccC
Q 026540           78 AGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKF  157 (237)
Q Consensus        78 ~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (237)
                      ..++.++|+||+||++|+|++|..||.+.+      ..+....+.+....++...                         
T Consensus       178 ~~~~~~~DiWSlGvily~ll~G~~Pf~~~~------~~~~~~~i~~~~~~~~~~~-------------------------  226 (321)
T d1tkia_         178 DVVSTATDMWSLGTLVYVLLSGINPFLAET------NQQIIENIMNAEYTFDEEA-------------------------  226 (321)
T ss_dssp             CEECHHHHHHHHHHHHHHHHHSSCTTCCSS------HHHHHHHHHHTCCCCCHHH-------------------------
T ss_pred             CCCCchhhcccHHHHHHHHHhCCCCCCCCC------HHHHHHHHHhCCCCCChhh-------------------------
Confidence            889999999999999999999999997653      3333433332211111110                         


Q ss_pred             CchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcCCCcCcc
Q 026540          158 WSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQHPWLSLR  208 (237)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~  208 (237)
                                   ...+++++.+||.+||+.||.+|||++|+++||||+..
T Consensus       227 -------------~~~~s~~~~~li~~~L~~dp~~R~s~~eil~hp~~~~~  264 (321)
T d1tkia_         227 -------------FKEISIEAMDFVDRLLVKERKSRMTASEALQHPWLKQK  264 (321)
T ss_dssp             -------------HTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHSC
T ss_pred             -------------ccCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhccC
Confidence                         01246778999999999999999999999999999753

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.8e-35  Score=231.57  Aligned_cols=158  Identities=23%  Similarity=0.284  Sum_probs=122.3

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCc-----CcccCcCCCcccchHHhhh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK-----QFAEEIQTRQYRAPEVILR   77 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~-----~~~~~~~~~~~~~PE~~~~   77 (237)
                      +++.++..++.|++.||+|+|+.+++||||||+|||++.++.+||+|||++.....     ......||+.|+|||++..
T Consensus       101 ~~~~~~~~i~~qi~~gl~yLH~~~ivHrDlKp~NiLl~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~  180 (276)
T d1uwha_         101 FEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRM  180 (276)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTSSEEECCCCCSCC------------CCCCGGGCCHHHHTT
T ss_pred             CCHHHHHHHHHHHHHHHHHHhcCCEeccccCHHHEEEcCCCCEEEccccceeeccccCCcccccccccCcccCCHHHHhc
Confidence            67889999999999999999999999999999999999999999999999865432     2334578999999999974


Q ss_pred             c---CCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcc
Q 026540           78 A---GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRR  154 (237)
Q Consensus        78 ~---~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (237)
                      .   .++.++||||+||++|++++|..||.+.+      ....+......-...|                         
T Consensus       181 ~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~------~~~~~~~~~~~~~~~p-------------------------  229 (276)
T d1uwha_         181 QDKNPYSFQSDVYAFGIVLYELMTGQLPYSNIN------NRDQIIFMVGRGYLSP-------------------------  229 (276)
T ss_dssp             CSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCC------CHHHHHHHHHHTSCCC-------------------------
T ss_pred             ccCCCCCchhhhhhhHHHHHHHHHCCCCCCCCC------hHHHHHHHHhcCCCCC-------------------------
Confidence            3   47899999999999999999999997653      2222222211100000                         


Q ss_pred             ccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcC
Q 026540          155 LKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQH  202 (237)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h  202 (237)
                                 .....+..+++.+.+|+.+||..||.+|||++|++++
T Consensus       230 -----------~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~il~~  266 (276)
T d1uwha_         230 -----------DLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILAS  266 (276)
T ss_dssp             -----------CGGGSCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             -----------cchhccccchHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence                       0011234457889999999999999999999999975

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.8e-35  Score=233.98  Aligned_cols=154  Identities=17%  Similarity=0.204  Sum_probs=118.4

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCc-----CcccCcCCCcccchHHhhh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK-----QFAEEIQTRQYRAPEVILR   77 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~-----~~~~~~~~~~~~~PE~~~~   77 (237)
                      +++.+++.++.|++.||+|+|+.+++||||||+|||++.++.+||+|||+++....     ......||+.|+|||++.+
T Consensus       131 l~~~~~~~~~~qi~~gl~ylH~~~ivHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~  210 (299)
T d1ywna1         131 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFD  210 (299)
T ss_dssp             BCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECGGGCEEECC------CCSCTTSCCTTSCCCGGGGCCHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCCcCCcCCccceeECCCCcEEEccCcchhhccccccccccCceeeCccccchhHhhc
Confidence            67899999999999999999999999999999999999999999999999965432     2234578999999999999


Q ss_pred             cCCCchhhhhhhhhHHHHHhcCC-cccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcccc
Q 026540           78 AGYSFSVDMWSFACTAFELATGD-MLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLK  156 (237)
Q Consensus        78 ~~~~~~~diws~g~~l~~~~~g~-~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (237)
                      ..++.++||||+||++|+|++|. .||.+..     .. ..+......-                               
T Consensus       211 ~~~~~~sDiwS~Gvil~ellt~~~~p~~~~~-----~~-~~~~~~~~~~-------------------------------  253 (299)
T d1ywna1         211 RVYTIQSDVWSFGVLLWEIFSLGASPYPGVK-----ID-EEFCRRLKEG-------------------------------  253 (299)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC-----CS-HHHHHHHHHT-------------------------------
T ss_pred             CCCCcccceeehHHHHHHHHhCCCCCCCCCC-----HH-HHHHHHHhcC-------------------------------
Confidence            99999999999999999999875 5675442     11 1111111100                               


Q ss_pred             CCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcC
Q 026540          157 FWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQH  202 (237)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h  202 (237)
                               .....+..+++++.+|+.+||+.||.+|||++|+++|
T Consensus       254 ---------~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~eil~~  290 (299)
T d1ywna1         254 ---------TRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH  290 (299)
T ss_dssp             ---------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ---------CCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence                     0112344567889999999999999999999999986

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.2e-35  Score=237.96  Aligned_cols=154  Identities=15%  Similarity=0.137  Sum_probs=124.7

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC-----cccCcCCCcccchHHhhh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ-----FAEEIQTRQYRAPEVILR   77 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~-----~~~~~~~~~~~~PE~~~~   77 (237)
                      +++.++..++.|++.||+|+|+.+++||||||+|||++.++.+||+|||+++.....     .....+|+.|+|||++.+
T Consensus       161 l~~~~~~~i~~qi~~gl~yLH~~~IiHRDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~  240 (325)
T d1rjba_         161 LTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFE  240 (325)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCeeeccCchhccccccCCeEEEeeccccccccCCCceeeeccccCCCccCChHHHcC
Confidence            678899999999999999999999999999999999999999999999999654322     123456889999999999


Q ss_pred             cCCCchhhhhhhhhHHHHHhc-CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcccc
Q 026540           78 AGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLK  156 (237)
Q Consensus        78 ~~~~~~~diws~g~~l~~~~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (237)
                      ..++.++||||+||++|+|++ |..||.+..      ....+..+.+.-                               
T Consensus       241 ~~~~~~~DiwS~Gvil~emlt~g~~Pf~~~~------~~~~~~~~~~~~-------------------------------  283 (325)
T d1rjba_         241 GIYTIKSDVWSYGILLWEIFSLGVNPYPGIP------VDANFYKLIQNG-------------------------------  283 (325)
T ss_dssp             CCCCHHHHHHHHHHHHHHHTTTSCCSSTTCC------CSHHHHHHHHTT-------------------------------
T ss_pred             CCCCcceeccchhHHHHHHHhCCCCCCCCCC------HHHHHHHHHhcC-------------------------------
Confidence            999999999999999999997 899997653      112222211100                               


Q ss_pred             CCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcC
Q 026540          157 FWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQH  202 (237)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h  202 (237)
                               .....+..+++++.+||.+||+.||++|||++||++|
T Consensus       284 ---------~~~~~p~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~  320 (325)
T d1rjba_         284 ---------FKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSF  320 (325)
T ss_dssp             ---------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ---------CCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence                     0112244567889999999999999999999999975

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.2e-35  Score=231.64  Aligned_cols=158  Identities=17%  Similarity=0.197  Sum_probs=126.0

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC----cccCcCCCcccchHHhhhc
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ----FAEEIQTRQYRAPEVILRA   78 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~----~~~~~~~~~~~~PE~~~~~   78 (237)
                      +++.++.+++.|++.||+|+|..+++||||||+|||++.++.+||+|||+++.....    .....+++.|+|||++...
T Consensus       106 l~~~~~~~i~~qi~~gl~~lH~~~ivHrDiKp~NIll~~~~~~Kl~DFGla~~~~~~~~~~~~~~~gt~~y~APE~~~~~  185 (272)
T d1qpca_         106 LTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYG  185 (272)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEECCTTCCCCTTTSCHHHHHHC
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCcccCccchhheeeecccceeeccccceEEccCCccccccccCCcccccChHHHhCC
Confidence            678899999999999999999999999999999999999999999999999765432    2334678899999999988


Q ss_pred             CCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCC
Q 026540           79 GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFW  158 (237)
Q Consensus        79 ~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (237)
                      .++.++||||+||++|++++|..|+....     ........+...                                  
T Consensus       186 ~~~~~sDvwS~Gvvl~ellt~~~~~~~~~-----~~~~~~~~i~~~----------------------------------  226 (272)
T d1qpca_         186 TFTIKSDVWSFGILLTEIVTHGRIPYPGM-----TNPEVIQNLERG----------------------------------  226 (272)
T ss_dssp             EECHHHHHHHHHHHHHHHHTTTCCSSTTC-----CHHHHHHHHHTT----------------------------------
T ss_pred             CCCchhhhhhhHHHHHHHHhCCCCCCCCC-----CHHHHHHHHHhc----------------------------------
Confidence            89999999999999999999665544332     122222211100                                  


Q ss_pred             chhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhc--CCCcC
Q 026540          159 SLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ--HPWLS  206 (237)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~--hp~f~  206 (237)
                             .....+..+++++.+|+.+||+.||++|||++|+++  ++||+
T Consensus       227 -------~~~~~p~~~~~~l~~li~~cl~~~P~~Rpt~~ei~~~L~~~ft  269 (272)
T d1qpca_         227 -------YRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFT  269 (272)
T ss_dssp             -------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             -------CCCCCcccChHHHHHHHHHHcCCCHhHCcCHHHHHHHhhhhhh
Confidence                   011123455778999999999999999999999998  78875

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-34  Score=233.70  Aligned_cols=167  Identities=19%  Similarity=0.181  Sum_probs=131.9

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCc----CcccCcCCCcccchHHhhhc
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK----QFAEEIQTRQYRAPEVILRA   78 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~----~~~~~~~~~~~~~PE~~~~~   78 (237)
                      +.|..+..+++|++.||.|+|..+++||||||+|||++.++.++|+|||++.....    ......|++.|++||.+.+.
T Consensus       126 ~~e~~~~~~~~Qi~~al~~lH~~~ivHrDiKp~Nill~~~~~vkL~DFG~a~~~~~~~~~~~~~~~g~~~~~~pe~~~~~  205 (322)
T d1vzoa_         126 FTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGG  205 (322)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEESCSSEEEECCGGGGGGGCGGGSCCTTCCHHHHTTC
T ss_pred             ccHHHHHHHHHHHHHHHHHhhcCCEEeccCCccceeecCCCCEEEeeccchhhhcccccccccccccccccchhHHhhcC
Confidence            46889999999999999999999999999999999999999999999999865432    23345778999999999865


Q ss_pred             C--CCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcccc
Q 026540           79 G--YSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLK  156 (237)
Q Consensus        79 ~--~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (237)
                      .  ++.++||||+||++++|++|..||.+....      .....+.+                                 
T Consensus       206 ~~~~~~ksDIWSlG~iLyelltG~~PF~~~~~~------~~~~~i~~---------------------------------  246 (322)
T d1vzoa_         206 DSGHDKAVDWWSLGVLMYELLTGASPFTVDGEK------NSQAEISR---------------------------------  246 (322)
T ss_dssp             C---CTHHHHHHHHHHHHHHHHSSCTTSCTTSC------CCHHHHHH---------------------------------
T ss_pred             CcCCCchhhhHHHHHHHHHHHhCCCCCCCCCHH------HHHHHHHH---------------------------------
Confidence            3  678999999999999999999999766421      11111111                                 


Q ss_pred             CCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCC-----CHHHHhcCCCcCcccCCcc
Q 026540          157 FWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRP-----TAQQCLQHPWLSLRNSTRD  213 (237)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~-----t~~ell~hp~f~~~~~~~~  213 (237)
                           .........+...+.++.+||.+||+.||.+|+     |++|+++||||++.++...
T Consensus       247 -----~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~R~s~~~~t~~eil~Hpff~~i~~~~l  303 (322)
T d1vzoa_         247 -----RILKSEPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKINWDDL  303 (322)
T ss_dssp             -----HHHHCCCCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGGTTCCHHHH
T ss_pred             -----hcccCCCCCcccCCHHHHHHHHHHcccCHHHcCCCCcccHHHHHcCHhhcCCCHHHH
Confidence                 111112233445688999999999999999999     5899999999998765433

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.6e-35  Score=230.61  Aligned_cols=158  Identities=16%  Similarity=0.206  Sum_probs=125.4

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC------cccCcCCCcccchHHh
Q 026540            2 TIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ------FAEEIQTRQYRAPEVI   75 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~------~~~~~~~~~~~~PE~~   75 (237)
                      .+++.++..++.|++.||+|+|+.+++||||||+|||++.++.+|++|||++......      .....||+.|+|||.+
T Consensus       103 ~l~~~~~~~i~~qi~~gl~ylH~~~iiHrDlKp~Nill~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~APE~l  182 (277)
T d1xbba_         103 HVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI  182 (277)
T ss_dssp             TCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEEEC----CCCGGGCCHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHhhHHhCCcccCCCcchhhcccccCcccccchhhhhhccccccccccccccCCCceecCchhh
Confidence            3678999999999999999999999999999999999999999999999999754322      2234678899999999


Q ss_pred             hhcCCCchhhhhhhhhHHHHHhc-CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcc
Q 026540           76 LRAGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRR  154 (237)
Q Consensus        76 ~~~~~~~~~diws~g~~l~~~~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (237)
                      .+..++.++||||+|+++|++++ |..||.+.+      ..+....+.+  +                            
T Consensus       183 ~~~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~------~~~~~~~i~~--~----------------------------  226 (277)
T d1xbba_         183 NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK------GSEVTAMLEK--G----------------------------  226 (277)
T ss_dssp             HHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCC------HHHHHHHHHT--T----------------------------
T ss_pred             cCCCCCchhhhccchhhhhHHhhCCCCCCCCCC------HHHHHHHHHc--C----------------------------
Confidence            99999999999999999999997 899997653      2221111100  0                            


Q ss_pred             ccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHH---hcCCCcC
Q 026540          155 LKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQC---LQHPWLS  206 (237)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~el---l~hp~f~  206 (237)
                                 .....+..++.++.+|+.+||+.||++|||++++   |+|+|+.
T Consensus       227 -----------~~~~~p~~~~~~~~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~  270 (277)
T d1xbba_         227 -----------ERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYD  270 (277)
T ss_dssp             -----------CCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHH
T ss_pred             -----------CCCCCCcccCHHHHHHHHHHcCCCHhHCcCHHHHHHHhhCHHhh
Confidence                       0112344567889999999999999999999998   4566654

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-34  Score=230.51  Aligned_cols=158  Identities=16%  Similarity=0.171  Sum_probs=127.8

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC------cccCcCCCcccchHHhh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ------FAEEIQTRQYRAPEVIL   76 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~------~~~~~~~~~~~~PE~~~   76 (237)
                      +++.++..++.|++.||+|+|+.+++||||||+|||++.++.+||+|||++......      .....+|+.|+|||++.
T Consensus       106 l~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  185 (285)
T d1u59a_         106 IPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECIN  185 (285)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCEECCCCSSCCCGGGCCHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCeecCcCchhheeeccCCceeeccchhhhcccccccccccccccccCccccChHHHh
Confidence            678999999999999999999999999999999999999999999999999765422      22346788999999999


Q ss_pred             hcCCCchhhhhhhhhHHHHHhc-CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccc
Q 026540           77 RAGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRL  155 (237)
Q Consensus        77 ~~~~~~~~diws~g~~l~~~~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (237)
                      +..++.++||||+||++||+++ |..||.+..      ..+....+.+  |                             
T Consensus       186 ~~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~------~~~~~~~i~~--~-----------------------------  228 (285)
T d1u59a_         186 FRKFSSRSDVWSYGVTMWEALSYGQKPYKKMK------GPEVMAFIEQ--G-----------------------------  228 (285)
T ss_dssp             HCEECHHHHHHHHHHHHHHHHTTSCCTTTTCC------THHHHHHHHT--T-----------------------------
T ss_pred             CCCCCccchhhcchHHHHHHHhCCCCCCCCCC------HHHHHHHHHc--C-----------------------------
Confidence            9999999999999999999997 899997653      2222221110  0                             


Q ss_pred             cCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHH---hcCCCcCc
Q 026540          156 KFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQC---LQHPWLSL  207 (237)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~el---l~hp~f~~  207 (237)
                                .....+..+++++.+||.+||+.||++|||+.++   |+|+|+..
T Consensus       229 ----------~~~~~p~~~~~~l~~li~~cl~~~p~~RPs~~~i~~~L~~~~~~~  273 (285)
T d1u59a_         229 ----------KRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSL  273 (285)
T ss_dssp             ----------CCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred             ----------CCCCCCCcCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHHh
Confidence                      0112344567889999999999999999999887   56787753

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=5.9e-34  Score=227.82  Aligned_cols=153  Identities=14%  Similarity=0.175  Sum_probs=115.7

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC--------cccCcCCCcccchHH
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ--------FAEEIQTRQYRAPEV   74 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~--------~~~~~~~~~~~~PE~   74 (237)
                      +++.++..++.|+++||+|+|+.+++||||||+|||++.++.+||+|||++......        .....+|+.|+|||.
T Consensus       125 l~~~~~~~i~~qia~gl~yLH~~~iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~~~~t~~y~aPE~  204 (299)
T d1jpaa_         125 FTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEA  204 (299)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC-----------------------CGGGSCHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHhhCCCccCccccceEEECCCCcEEECCcccceEccCCCCcceeeecccccCCccccCHHH
Confidence            678899999999999999999999999999999999999999999999998654321        112356889999999


Q ss_pred             hhhcCCCchhhhhhhhhHHHHHhc-CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhc
Q 026540           75 ILRAGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIR  153 (237)
Q Consensus        75 ~~~~~~~~~~diws~g~~l~~~~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (237)
                      +.+..++.++||||+||++|++++ |..||.+.+      .......+.+.                             
T Consensus       205 ~~~~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~~------~~~~~~~i~~~-----------------------------  249 (299)
T d1jpaa_         205 IQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMT------NQDVINAIEQD-----------------------------  249 (299)
T ss_dssp             HHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC------HHHHHHHHHTT-----------------------------
T ss_pred             HhcCCCCcccccccchHHHHHHHhCCCCCCCCCC------HHHHHHHHHcC-----------------------------
Confidence            999999999999999999999997 889997653      22222211110                             


Q ss_pred             cccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcC
Q 026540          154 RLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQH  202 (237)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h  202 (237)
                                  .....+..++..+.+|+.+||+.||.+|||+.|++++
T Consensus       250 ------------~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~ei~~~  286 (299)
T d1jpaa_         250 ------------YRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNT  286 (299)
T ss_dssp             ------------CCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred             ------------CCCCCCccchHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence                        0111234457789999999999999999999998864

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.8e-34  Score=225.76  Aligned_cols=161  Identities=18%  Similarity=0.211  Sum_probs=125.4

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCc----CcccCcCCCcccchHHhhhc
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK----QFAEEIQTRQYRAPEVILRA   78 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~----~~~~~~~~~~~~~PE~~~~~   78 (237)
                      +++.++..++.|++.||+|+|..+++||||||+|||++.++.+||+|||+++....    ......+++.|+|||.+...
T Consensus       110 l~~~~~~~i~~~i~~gl~~LH~~~ivH~DlKp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  189 (285)
T d1fmka3         110 LRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYG  189 (285)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCCTTC--------------CCGGGSCHHHHHHC
T ss_pred             chHHHHHHHHHHHHHHHHHHhhhheecccccceEEEECCCCcEEEcccchhhhccCCCceeeccccccccccChHHHhCC
Confidence            67899999999999999999999999999999999999999999999999965432    22235678999999999999


Q ss_pred             CCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCC
Q 026540           79 GYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFW  158 (237)
Q Consensus        79 ~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (237)
                      .++.++||||+|+++|++++|..|+....     .....+..+.+.                                  
T Consensus       190 ~~~~ksDI~S~Giil~el~t~~~p~~~~~-----~~~~~~~~i~~~----------------------------------  230 (285)
T d1fmka3         190 RFTIKSDVWSFGILLTELTTKGRVPYPGM-----VNREVLDQVERG----------------------------------  230 (285)
T ss_dssp             CCCHHHHHHHHHHHHHHHHTTTCCSSTTC-----CHHHHHHHHHTT----------------------------------
T ss_pred             CCCcHHhhhcchHHHHHHHhCCCCCCCCC-----CHHHHHHHHHhc----------------------------------
Confidence            99999999999999999999765554432     222222222110                                  


Q ss_pred             chhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhc--CCCcCccc
Q 026540          159 SLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ--HPWLSLRN  209 (237)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~--hp~f~~~~  209 (237)
                             .....+..+++++.+||.+||+.||++|||++++++  ++||....
T Consensus       231 -------~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~~~~~~~  276 (285)
T d1fmka3         231 -------YRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTE  276 (285)
T ss_dssp             -------CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCSC
T ss_pred             -------CCCCCCcccCHHHHHHHHHHcccCHhHCcCHHHHHHHHhhhhcCCC
Confidence                   011234456788999999999999999999999988  88997543

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.9e-34  Score=224.45  Aligned_cols=153  Identities=16%  Similarity=0.203  Sum_probs=114.5

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC----cccCcCCCcccchHHhhhc
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ----FAEEIQTRQYRAPEVILRA   78 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~----~~~~~~~~~~~~PE~~~~~   78 (237)
                      +++..+..++.|++.||+|+|..+++||||||+|||++.++.+||+|||++......    .....||..|+|||++.+.
T Consensus        98 ~~~~~~~~i~~qia~gl~~lH~~~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~l~~~  177 (263)
T d1sm2a_          98 FAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFS  177 (263)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTCCCTTCSGGGEEECGGGCEEECSCC------------------CTTSCCHHHHTTC
T ss_pred             CCHHHHHHHHHHHHHHHHhhhccceeecccchhheeecCCCCeEecccchheeccCCCceeecceecCcccCChHHhcCC
Confidence            567889999999999999999999999999999999999999999999998654321    2235678999999999999


Q ss_pred             CCCchhhhhhhhhHHHHHhcCC-cccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccC
Q 026540           79 GYSFSVDMWSFACTAFELATGD-MLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKF  157 (237)
Q Consensus        79 ~~~~~~diws~g~~l~~~~~g~-~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (237)
                      .++.++|+||+|+++|+++++. +||...      ........+....                                
T Consensus       178 ~~~~k~DVwS~Gvil~el~t~~~~~~~~~------~~~~~~~~i~~~~--------------------------------  219 (263)
T d1sm2a_         178 RYSSKSDVWSFGVLMWEVFSEGKIPYENR------SNSEVVEDISTGF--------------------------------  219 (263)
T ss_dssp             CCCHHHHHHHHHHHHHHHHTTSCCTTCSC------CHHHHHHHHHHTC--------------------------------
T ss_pred             CCCchhhhcchHHHHHHHHHCCCCCCCCC------CHHHHHHHHHhcC--------------------------------
Confidence            9999999999999999999954 455433      2222222221100                                


Q ss_pred             CchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcC
Q 026540          158 WSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQH  202 (237)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h  202 (237)
                               ....+..+++++.+|+.+||+.||++|||++|+++|
T Consensus       220 ---------~~~~p~~~~~~l~~li~~cl~~~p~~Rps~~~il~~  255 (263)
T d1sm2a_         220 ---------RLYKPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQ  255 (263)
T ss_dssp             ---------CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ---------CCCCccccCHHHHHHHHHHccCCHhHCcCHHHHHHH
Confidence                     111234456789999999999999999999999975

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=6.5e-34  Score=226.31  Aligned_cols=154  Identities=20%  Similarity=0.231  Sum_probs=122.3

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC----cccCcCCCcccchHHhhh
Q 026540            2 TIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ----FAEEIQTRQYRAPEVILR   77 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~----~~~~~~~~~~~~PE~~~~   77 (237)
                      .+++..+..++.|++.||+|+|..+++||||||+|||++.++.+||+|||++......    .....+++.|+|||++.+
T Consensus       111 ~~~~~~~~~i~~qi~~gL~yLH~~~iiHrDlKp~NILl~~~~~~Kl~DFG~a~~~~~~~~~~~~~~~g~~~y~aPE~~~~  190 (287)
T d1opja_         111 EVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY  190 (287)
T ss_dssp             TSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCCCTTTCCSSSSEEETTEEECGGGCCHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHCCcccCccccCeEEECCCCcEEEccccceeecCCCCceeeccccccccccChHHHcC
Confidence            4678899999999999999999999999999999999999999999999999654422    122346788999999999


Q ss_pred             cCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccC
Q 026540           78 AGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKF  157 (237)
Q Consensus        78 ~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (237)
                      ..++.++|+||+|+++|++++|..||....      +...+......  .                              
T Consensus       191 ~~~~~k~DiwS~Gv~l~ell~~~~p~~~~~------~~~~~~~~i~~--~------------------------------  232 (287)
T d1opja_         191 NKFSIKSDVWAFGVLLWEIATYGMSPYPGI------DLSQVYELLEK--D------------------------------  232 (287)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHTTSCCSSTTC------CHHHHHHHHHT--T------------------------------
T ss_pred             CCCCchhhhhhHHHHHHHHHhCCCCCCCcc------hHHHHHHHHhc--C------------------------------
Confidence            999999999999999999999777665432      22221111100  0                              


Q ss_pred             CchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhc
Q 026540          158 WSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ  201 (237)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  201 (237)
                              .....+..+++.+.+|+.+||+.||.+|||++|+++
T Consensus       233 --------~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ei~~  268 (287)
T d1opja_         233 --------YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ  268 (287)
T ss_dssp             --------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             --------CCCCCCccchHHHHHHHHHHcCCCHhHCcCHHHHHH
Confidence                    011234456788999999999999999999999976

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.6e-33  Score=223.80  Aligned_cols=153  Identities=14%  Similarity=0.119  Sum_probs=116.3

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC------cccCcCCCcccchHHhh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ------FAEEIQTRQYRAPEVIL   76 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~------~~~~~~~~~~~~PE~~~   76 (237)
                      +++.++.+++.|++.||+|+|+.+++||||||+|||++.++.+||+|||+++.....      .....||+.|+|||++.
T Consensus       107 ~~~~~~~~i~~~i~~gl~~lH~~~iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~APE~l~  186 (283)
T d1mqba_         107 FSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAIS  186 (283)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCCCC-----------------CCCGGGSCHHHHH
T ss_pred             ccHHHHHHHHHHHHHhhhhccccccccCccccceEEECCCCeEEEcccchhhcccCCCccceEeccCCCCccccCHHHHc
Confidence            567889999999999999999999999999999999999999999999999654321      12335688999999999


Q ss_pred             hcCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcccc
Q 026540           77 RAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLK  156 (237)
Q Consensus        77 ~~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (237)
                      +..++.++||||+|+++|+++++..|+....     .....+..+...                                
T Consensus       187 ~~~~~~~sDI~S~Gvil~el~t~~~~~~~~~-----~~~~~~~~i~~~--------------------------------  229 (283)
T d1mqba_         187 YRKFTSASDVWSFGIVMWEVMTYGERPYWEL-----SNHEVMKAINDG--------------------------------  229 (283)
T ss_dssp             SCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC-----CHHHHHHHHHTT--------------------------------
T ss_pred             cCCCCCcccccccHHHHHHHHhCCCCccccC-----CHHHHHHHHhcc--------------------------------
Confidence            9999999999999999999999766654432     122221111000                                


Q ss_pred             CCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhc
Q 026540          157 FWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ  201 (237)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  201 (237)
                               .....+..++..+.+|+.+||+.||.+|||+.|+++
T Consensus       230 ---------~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~eil~  265 (283)
T d1mqba_         230 ---------FRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVS  265 (283)
T ss_dssp             ---------CCCCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             ---------CCCCCchhhHHHHHHHHHHHCcCCHhHCcCHHHHHH
Confidence                     011223445678999999999999999999999986

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.4e-34  Score=225.00  Aligned_cols=154  Identities=14%  Similarity=0.185  Sum_probs=116.6

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCc----CcccCcCCCcccchHHhhh
Q 026540            2 TIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK----QFAEEIQTRQYRAPEVILR   77 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~----~~~~~~~~~~~~~PE~~~~   77 (237)
                      .+++.++..++.|+++||+|+|+.+++||||||+||+++.++.+||+|||++.....    ......+|+.|+|||++.+
T Consensus       104 ~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDlKp~NIll~~~~~~Kl~DfG~a~~~~~~~~~~~~~~~gt~~y~apE~l~~  183 (273)
T d1mp8a_         104 SLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINF  183 (273)
T ss_dssp             TSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECC-------------------CCGGGCCHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHhhhhcccCeeccccchhheeecCCCcEEEccchhheeccCCcceeccceecCcccchhhHhcc
Confidence            468899999999999999999999999999999999999999999999999865432    2234466889999999999


Q ss_pred             cCCCchhhhhhhhhHHHHHhc-CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcccc
Q 026540           78 AGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLK  156 (237)
Q Consensus        78 ~~~~~~~diws~g~~l~~~~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (237)
                      ..++.++|+||+||++|+|++ |..||....      .......+..  +                              
T Consensus       184 ~~~~~~~DiwSlGvil~e~lt~g~~P~~~~~------~~~~~~~i~~--~------------------------------  225 (273)
T d1mp8a_         184 RRFTSASDVWMFGVCMWEILMHGVKPFQGVK------NNDVIGRIEN--G------------------------------  225 (273)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHTTSCCTTTTCC------GGGHHHHHHT--T------------------------------
T ss_pred             CCCCCccccccchHHHHHHHhcCCCCCCCCC------HHHHHHHHHc--C------------------------------
Confidence            999999999999999999987 788887653      1111111100  0                              


Q ss_pred             CCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcC
Q 026540          157 FWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQH  202 (237)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h  202 (237)
                               .....+..+++.+.+||.+||..||.+|||++|++++
T Consensus       226 ---------~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~ei~~~  262 (273)
T d1mp8a_         226 ---------ERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQ  262 (273)
T ss_dssp             ---------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ---------CCCCCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence                     0112345567889999999999999999999999875

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.1e-33  Score=219.06  Aligned_cols=153  Identities=15%  Similarity=0.196  Sum_probs=124.3

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC----cccCcCCCcccchHHhhhc
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ----FAEEIQTRQYRAPEVILRA   78 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~----~~~~~~~~~~~~PE~~~~~   78 (237)
                      ++++.+.+++.|++.||.|+|..+++||||||+||+++.++.+||+|||++......    .....+|+.|+|||.+.+.
T Consensus        97 ~~~~~~~~i~~qi~~gl~~LH~~~iiH~dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~t~~y~aPE~~~~~  176 (258)
T d1k2pa_          97 FQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYS  176 (258)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTBCCSCCSGGGEEECTTCCEEECCCSSCCBCSSSSCCCCCCSCCCGGGCCHHHHHHC
T ss_pred             CcHHHHHHHHHHHHHHHHHHhhcCcccccccceeEEEcCCCcEEECcchhheeccCCCceeecccCCCCCcCCcHHhcCC
Confidence            567889999999999999999999999999999999999999999999998654322    2234678899999999999


Q ss_pred             CCCchhhhhhhhhHHHHHhc-CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccC
Q 026540           79 GYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKF  157 (237)
Q Consensus        79 ~~~~~~diws~g~~l~~~~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (237)
                      .++.++|+||+|+++|++++ |..||...+      ..+....+.+.                                 
T Consensus       177 ~~~~ksDiwS~G~~l~el~t~g~~Pf~~~~------~~~~~~~i~~~---------------------------------  217 (258)
T d1k2pa_         177 KFSSKSDIWAFGVLMWEIYSLGKMPYERFT------NSETAEHIAQG---------------------------------  217 (258)
T ss_dssp             CCCHHHHHHHHHHHHHHHHTTSCCTTTTSC------HHHHHHHHHTT---------------------------------
T ss_pred             CCCcceeecccchhhHhHHhcCCCCCCCCC------HHHHHHHHHhC---------------------------------
Confidence            99999999999999999998 788997653      22222222110                                 


Q ss_pred             CchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcC
Q 026540          158 WSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQH  202 (237)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h  202 (237)
                              .....+...+.++.+||.+||+.||++|||++++++|
T Consensus       218 --------~~~~~p~~~~~~l~~li~~cl~~dP~~RPt~~eil~~  254 (258)
T d1k2pa_         218 --------LRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSN  254 (258)
T ss_dssp             --------CCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred             --------CCCCCcccccHHHHHHHHHHccCCHhHCcCHHHHHHH
Confidence                    0111234456789999999999999999999999986

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.8e-34  Score=228.45  Aligned_cols=154  Identities=16%  Similarity=0.162  Sum_probs=122.3

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC-----cccCcCCCcccchHHhh
Q 026540            2 TIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ-----FAEEIQTRQYRAPEVIL   76 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~-----~~~~~~~~~~~~PE~~~   76 (237)
                      .+++..+.+++.|++.||+|+|+.+++||||||+|||++.++.+||+|||++......     .....||+.|+|||++.
T Consensus       107 ~~~~~~~~~i~~qi~~gl~yLH~~~iiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~  186 (317)
T d1xkka_         107 NIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL  186 (317)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCCSHHHHTTTTCC--------CCTTTSCHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHcCcccCcchhhcceeCCCCCeEeeccccceecccccccccccccccCccccChHHHh
Confidence            3678899999999999999999999999999999999999999999999998654321     22346789999999999


Q ss_pred             hcCCCchhhhhhhhhHHHHHhc-CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccc
Q 026540           77 RAGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRL  155 (237)
Q Consensus        77 ~~~~~~~~diws~g~~l~~~~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (237)
                      +..++.++|+||+||++|++++ |..||.+.+      .......+..                                
T Consensus       187 ~~~~~~~sDvwS~Gvil~el~t~g~~p~~~~~------~~~~~~~i~~--------------------------------  228 (317)
T d1xkka_         187 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP------ASEISSILEK--------------------------------  228 (317)
T ss_dssp             HCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSC------GGGHHHHHHH--------------------------------
T ss_pred             cCCCChhhhhhhHHHHHHHHHHCCCCCCCCCC------HHHHHHHHHc--------------------------------
Confidence            9999999999999999999998 678886543      1111111100                                


Q ss_pred             cCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcC
Q 026540          156 KFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQH  202 (237)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h  202 (237)
                               ......+..++..+.+|+.+||+.||.+|||+.|+++|
T Consensus       229 ---------~~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~eil~~  266 (317)
T d1xkka_         229 ---------GERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIE  266 (317)
T ss_dssp             ---------TCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ---------CCCCCCCcccCHHHHHHHHHhCCCChhhCcCHHHHHHH
Confidence                     00112344567889999999999999999999999987

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.97  E-value=5.9e-33  Score=222.34  Aligned_cols=153  Identities=16%  Similarity=0.211  Sum_probs=120.9

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCc-----CcccCcCCCcccchHHhh
Q 026540            2 TIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK-----QFAEEIQTRQYRAPEVIL   76 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~-----~~~~~~~~~~~~~PE~~~   76 (237)
                      ++++.++..++.|++.||+|+|+.+++||||||+|||++.++.+||+|||++.....     ......+++.|+|||.+.
T Consensus       136 ~l~~~~~~~i~~qi~~gl~ylH~~~ivHrDlKp~NILld~~~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~  215 (301)
T d1lufa_         136 PLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIF  215 (301)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHhhhcccCCeEeeEEcccceEECCCCcEEEccchhheeccCCccccccCCCCcCcCcCCHHHHc
Confidence            367889999999999999999999999999999999999999999999999864321     223456788999999999


Q ss_pred             hcCCCchhhhhhhhhHHHHHhcCC-cccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccc
Q 026540           77 RAGYSFSVDMWSFACTAFELATGD-MLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRL  155 (237)
Q Consensus        77 ~~~~~~~~diws~g~~l~~~~~g~-~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (237)
                      +..++.++|||||||++|++++|. .||....      ..+....+.+  +.                            
T Consensus       216 ~~~~t~ksDVwS~Gvvl~ell~~~~~p~~~~~------~~e~~~~v~~--~~----------------------------  259 (301)
T d1lufa_         216 YNRYTTESDVWAYGVVLWEIFSYGLQPYYGMA------HEEVIYYVRD--GN----------------------------  259 (301)
T ss_dssp             HCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSC------HHHHHHHHHT--TC----------------------------
T ss_pred             cCCCChhhhhccchhhHHHHHccCCCCCCCCC------HHHHHHHHHc--CC----------------------------
Confidence            999999999999999999999986 5665442      2222221110  00                            


Q ss_pred             cCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhc
Q 026540          156 KFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ  201 (237)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  201 (237)
                                 ....+..+++++.+|+.+||+.||.+|||+.|+++
T Consensus       260 -----------~~~~p~~~~~~~~~li~~cl~~~P~~RPt~~ev~~  294 (301)
T d1lufa_         260 -----------ILACPENCPLELYNLMRLCWSKLPADRPSFCSIHR  294 (301)
T ss_dssp             -----------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             -----------CCCCCccchHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence                       11224456778999999999999999999999965

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.97  E-value=8.7e-33  Score=218.90  Aligned_cols=159  Identities=21%  Similarity=0.202  Sum_probs=118.3

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCc------CcccCcCCCcccchHHhh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANK------QFAEEIQTRQYRAPEVIL   76 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~------~~~~~~~~~~~~~PE~~~   76 (237)
                      +++.+++.++.|++.||+|+|..+++||||||+|||++.++..+++|||.+.....      ......||+.|+|||++.
T Consensus       108 l~~~~~~~i~~qi~~al~~lH~~~iiHrDiKP~NIll~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~  187 (277)
T d1o6ya_         108 MTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQAR  187 (277)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTSCEEECCCTTCEECC----------------TTCCHHHHT
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCccCccccCcccccCccccceeehhhhhhhhccccccccccccccCcccccCHHHHc
Confidence            67899999999999999999999999999999999999999999999998754321      233457899999999999


Q ss_pred             hcCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcccc
Q 026540           77 RAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLK  156 (237)
Q Consensus        77 ~~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (237)
                      +..++.++|+||+||++|+|++|..||.+.+      ....+..+.+.- ..+                           
T Consensus       188 ~~~~~~~~DiwSlGvilyelltG~~Pf~~~~------~~~~~~~~~~~~-~~~---------------------------  233 (277)
T d1o6ya_         188 GDSVDARSDVYSLGCVLYEVLTGEPPFTGDS------PVSVAYQHVRED-PIP---------------------------  233 (277)
T ss_dssp             TCCCCHHHHHHHHHHHHHHHHHSSCSCCCSS------HHHHHHHHHHCC-CCC---------------------------
T ss_pred             CCCCCcceecccchHHHHHHHhCCCCCCCcC------HHHHHHHHHhcC-CCC---------------------------
Confidence            8889999999999999999999999997653      222222221100 000                           


Q ss_pred             CCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCC-CHHHHhcCCCcC
Q 026540          157 FWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRP-TAQQCLQHPWLS  206 (237)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~-t~~ell~hp~f~  206 (237)
                                .......+++.+.+||.+||+.||.+|| |+++++ |+|.+
T Consensus       234 ----------~~~~~~~~s~~l~~li~~~L~~dp~~R~~sa~~l~-~~l~r  273 (277)
T d1o6ya_         234 ----------PSARHEGLSADLDAVVLKALAKNPENRYQTAAEMR-ADLVR  273 (277)
T ss_dssp             ----------GGGTSSSCCHHHHHHHHHHTCSSGGGSCSSHHHHH-HHHHH
T ss_pred             ----------CchhccCCCHHHHHHHHHHccCCHhHCHhHHHHHH-HHHHH
Confidence                      0011234568899999999999999999 566554 55543

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=2.6e-32  Score=218.36  Aligned_cols=152  Identities=20%  Similarity=0.254  Sum_probs=122.1

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC-----cccCcCCCcccchHHhhh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ-----FAEEIQTRQYRAPEVILR   77 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~-----~~~~~~~~~~~~PE~~~~   77 (237)
                      |++.+++.++.|++.||+|+|+.+++||||||+|||++.++.+||+|||++......     .....+++.|+|||.+.+
T Consensus       132 l~~~~~~~~~~qi~~al~ylH~~~ivHrDiKp~NiLl~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~~  211 (299)
T d1fgka_         132 LSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFD  211 (299)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHhhhCCEEeeeecccceeecCCCCeEeccchhhccccccccccccccCCCChhhhhhhHhcC
Confidence            688999999999999999999999999999999999999999999999998654321     233567889999999999


Q ss_pred             cCCCchhhhhhhhhHHHHHhc-CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcccc
Q 026540           78 AGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLK  156 (237)
Q Consensus        78 ~~~~~~~diws~g~~l~~~~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (237)
                      ..++.++|+||+|+++|+|++ |..||....      .......+..  +                              
T Consensus       212 ~~y~~k~DiwS~Gvvl~ell~~g~~p~~~~~------~~~~~~~i~~--~------------------------------  253 (299)
T d1fgka_         212 RIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP------VEELFKLLKE--G------------------------------  253 (299)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC------HHHHHHHHHT--T------------------------------
T ss_pred             CCCCchhhhHHhHHHHHHhccCCCCCCCCCC------HHHHHHHHHc--C------------------------------
Confidence            999999999999999999998 677776542      2111111100  0                              


Q ss_pred             CCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhc
Q 026540          157 FWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ  201 (237)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  201 (237)
                               .....+..+++.+.+||.+||+.||++|||+.|+++
T Consensus       254 ---------~~~~~p~~~~~~l~~li~~cl~~dP~~Rps~~eil~  289 (299)
T d1fgka_         254 ---------HRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVE  289 (299)
T ss_dssp             ---------CCCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ---------CCCCCCccchHHHHHHHHHHccCCHhHCcCHHHHHH
Confidence                     011123345678999999999999999999999986

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.8e-32  Score=215.05  Aligned_cols=153  Identities=16%  Similarity=0.145  Sum_probs=117.3

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcCcccCcCCCcccchHHhhhcCCCc
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAPEVILRAGYSF   82 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~   82 (237)
                      +++..+.+++.|++.||+|+|+.+++||||||+||+++.++.+|++|||++...........++..|+|||.+.+..++.
T Consensus       100 l~~~~~~~i~~~i~~al~ylH~~~ivH~dlkp~Nil~~~~~~~kl~dfg~s~~~~~~~~~~~~~~~y~aPE~l~~~~~t~  179 (262)
T d1byga_         100 LGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFST  179 (262)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEECCCCC------------CCTTTSCHHHHHHCCCCH
T ss_pred             CCHHHHHHHHHHHHhhccccccCceeccccchHhheecCCCCEeecccccceecCCCCccccccccCCChHHHhCCCCCh
Confidence            57888999999999999999999999999999999999999999999999987666666667789999999999999999


Q ss_pred             hhhhhhhhhHHHHHhc-CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCCchh
Q 026540           83 SVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFWSLD  161 (237)
Q Consensus        83 ~~diws~g~~l~~~~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (237)
                      ++||||||+++|++++ |..||....      ..+....+..                                      
T Consensus       180 ~sDIwSfG~il~el~t~~~~p~~~~~------~~~~~~~i~~--------------------------------------  215 (262)
T d1byga_         180 KSDVWSFGILLWEIYSFGRVPYPRIP------LKDVVPRVEK--------------------------------------  215 (262)
T ss_dssp             HHHHHHHHHHHHHHHTTSCCSCTTSC------GGGHHHHHTT--------------------------------------
T ss_pred             HHHHHhHHHHHHHHHHCCCCCCCCCC------HHHHHHHHHc--------------------------------------
Confidence            9999999999999998 677775442      1111111100                                      


Q ss_pred             HHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcC
Q 026540          162 RLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQH  202 (237)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h  202 (237)
                         ......+..+++++.+||.+||+.||.+|||+.+++++
T Consensus       216 ---~~~~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~l~~~  253 (262)
T d1byga_         216 ---GYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQ  253 (262)
T ss_dssp             ---TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ---CCCCCCCccCCHHHHHHHHHHcccCHhHCcCHHHHHHH
Confidence               00122344567889999999999999999999999863

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=2.9e-32  Score=215.24  Aligned_cols=153  Identities=18%  Similarity=0.186  Sum_probs=121.1

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC------cccCcCCCcccchHHhh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ------FAEEIQTRQYRAPEVIL   76 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~------~~~~~~~~~~~~PE~~~   76 (237)
                      ++++.++.++.|++.||.|+|+.+++||||||+||+++.++.+||+|||++......      .....++..|+|||.+.
T Consensus       108 l~~~~~~~~~~qi~~gl~ylH~~~iiHrDikp~NIll~~~~~vkl~DfGl~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~  187 (273)
T d1u46a_         108 FLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLK  187 (273)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCTTCEECCC-CCEEEC-----CCGGGCCHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHhhhCCEeeeeecHHHhccccccceeeccchhhhhcccCCCcceecCccccCcccCCHHHHh
Confidence            678999999999999999999999999999999999999999999999999765322      22335678899999999


Q ss_pred             hcCCCchhhhhhhhhHHHHHhc-CCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccc
Q 026540           77 RAGYSFSVDMWSFACTAFELAT-GDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRL  155 (237)
Q Consensus        77 ~~~~~~~~diws~g~~l~~~~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (237)
                      +..++.++|+||+|+++|+|++ |..||.+.+      ..+....+.+. +                             
T Consensus       188 ~~~~~~~~Di~S~Gvil~emlt~G~~Pf~~~~------~~~~~~~i~~~-~-----------------------------  231 (273)
T d1u46a_         188 TRTFSHASDTWMFGVTLWEMFTYGQEPWIGLN------GSQILHKIDKE-G-----------------------------  231 (273)
T ss_dssp             HCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCC------HHHHHHHHHTS-C-----------------------------
T ss_pred             CCCCCcchhhhhhHHHHHHHHhCCCCCCCCcC------HHHHHHHHHhC-C-----------------------------
Confidence            9899999999999999999997 899997653      22222222110 0                             


Q ss_pred             cCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhc
Q 026540          156 KFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ  201 (237)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  201 (237)
                                .....+..++..+.+|+.+||+.||.+|||+.|+++
T Consensus       232 ----------~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~ei~~  267 (273)
T d1u46a_         232 ----------ERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRD  267 (273)
T ss_dssp             ----------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ----------CCCCCcccccHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence                      001123445678999999999999999999999863

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.97  E-value=1.9e-31  Score=213.31  Aligned_cols=165  Identities=15%  Similarity=0.107  Sum_probs=123.0

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCC---CCcEEEeecCcceecCcC----------cccCcCCCc
Q 026540            2 TIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGI---DMRCKVVDFGNACRANKQ----------FAEEIQTRQ   68 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~---~~~~kl~dfg~~~~~~~~----------~~~~~~~~~   68 (237)
                      .+++..+..++.|++.||+|+|+.+++||||||+|||++.   +..++++|||++......          .....||+.
T Consensus        99 ~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~  178 (299)
T d1ckia_          99 KFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTAR  178 (299)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCSSCEECBCTTTCCBCCCCBCCSCCCCSS
T ss_pred             CCcHHHHHHHHHHHHHHHHHHHHCCeeeccCCHhhccccccCCCceeeeeccCcceeccccccccceeccccCCcCCCcc
Confidence            3678899999999999999999999999999999998764   457999999999765321          234478999


Q ss_pred             ccchHHhhhcCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCc
Q 026540           69 YRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGD  148 (237)
Q Consensus        69 ~~~PE~~~~~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (237)
                      |+|||.+.+..++.++|+||+||+++++++|..||......      ..........                       
T Consensus       179 y~aPE~~~~~~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~------~~~~~~~~~~-----------------------  229 (299)
T d1ckia_         179 YASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAA------TKRQKYERIS-----------------------  229 (299)
T ss_dssp             SCCHHHHTTBCCCHHHHHHHHHHHHHHHHHSSCTTCCCC-------------HHHHH-----------------------
T ss_pred             ccCHHHHhCCCCCChhhEEecCHHHHHHHhCCCcccccchH------HHHHHHHHhh-----------------------
Confidence            99999999999999999999999999999999999765311      1111110000                       


Q ss_pred             cchhccccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHH---HHhcCCCcC
Q 026540          149 LKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQ---QCLQHPWLS  206 (237)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~---ell~hp~f~  206 (237)
                                 ..............+++++.+|+..||..+|.+||+++   ++|+|+|.+
T Consensus       230 -----------~~~~~~~~~~~~~~~p~~~~~li~~cl~~~p~~RP~~~~i~~~l~~~~~~  279 (299)
T d1ckia_         230 -----------EKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHR  279 (299)
T ss_dssp             -----------HHHHHSCHHHHTTTSCHHHHHHHHHHHHSCTTCCCCHHHHHHHHHHHHHH
T ss_pred             -----------cccCCCChhHhccCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHHH
Confidence                       00000000011234568899999999999999999987   456777654

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.6e-31  Score=214.74  Aligned_cols=154  Identities=17%  Similarity=0.173  Sum_probs=120.5

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC-------cccCcCCCcccchHHh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ-------FAEEIQTRQYRAPEVI   75 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~-------~~~~~~~~~~~~PE~~   75 (237)
                      +.+..+..++.|++.||+|+|+.+++||||||+|||++.++.+||+|||++......       .....|+..|++||.+
T Consensus       127 ~~~~~~~~i~~qia~gL~~lH~~~iiHrDLK~~NILl~~~~~~kL~DFG~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  206 (311)
T d1r0pa_         127 PTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL  206 (311)
T ss_dssp             CBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECSSGGGCCTTTTTCCCTTCTTCSSCCGGGSCHHHH
T ss_pred             chHHHHHHHHHHHHHhhhhhcccCcccCCccHHhEeECCCCCEEEecccchhhccccccccceecccccccccccChHHH
Confidence            456788999999999999999999999999999999999999999999999654321       2234678899999999


Q ss_pred             hhcCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccc
Q 026540           76 LRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRL  155 (237)
Q Consensus        76 ~~~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (237)
                      ....++.++||||||+++|++++|..||....     ...+....+..  |                             
T Consensus       207 ~~~~~~~ksDI~SfGivl~El~t~~~p~~~~~-----~~~~~~~~i~~--g-----------------------------  250 (311)
T d1r0pa_         207 QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV-----NTFDITVYLLQ--G-----------------------------  250 (311)
T ss_dssp             HHCCCCHHHHHHHHHHHHHHHHTTSCCSCC-----------CHHHHHT--T-----------------------------
T ss_pred             hcCCCCChhHhhhhHHHHHHHHHCCCCCCCCC-----CHHHHHHHHHc--C-----------------------------
Confidence            99999999999999999999999887775432     00000000000  0                             


Q ss_pred             cCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcC
Q 026540          156 KFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQH  202 (237)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h  202 (237)
                                .....+..+++.+.+|+.+||+.||++|||+.|+++|
T Consensus       251 ----------~~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~  287 (311)
T d1r0pa_         251 ----------RRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSR  287 (311)
T ss_dssp             ----------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ----------CCCCCcccCcHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence                      0111234456789999999999999999999999987

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=2.3e-31  Score=213.62  Aligned_cols=158  Identities=18%  Similarity=0.224  Sum_probs=125.6

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC-----cccCcCCCcccchHHhhh
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ-----FAEEIQTRQYRAPEVILR   77 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~-----~~~~~~~~~~~~PE~~~~   77 (237)
                      +++.++.+++.+++.||.|+|..+++||||||+|||++.++.+||+|||++......     .....+++.|++||.+.+
T Consensus       130 ~~~~~~~~i~~~ia~gl~~LH~~~ivHrDlk~~NiLld~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~t~~y~aPe~l~~  209 (308)
T d1p4oa_         130 PSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKD  209 (308)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEECTTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHhhCCeeeceEcCCceeecCCceEEEeecccceeccCCcceeeccceecccccCCHHHHcc
Confidence            467789999999999999999999999999999999999999999999998654321     233467899999999999


Q ss_pred             cCCCchhhhhhhhhHHHHHhcCC-cccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhcccc
Q 026540           78 AGYSFSVDMWSFACTAFELATGD-MLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLK  156 (237)
Q Consensus        78 ~~~~~~~diws~g~~l~~~~~g~-~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (237)
                      ..++.++|+||+|+++|+|++|. .||.+.+      ....+..+.+.                                
T Consensus       210 ~~~~~~~Dv~S~G~il~El~t~~~~p~~~~~------~~~~~~~i~~~--------------------------------  251 (308)
T d1p4oa_         210 GVFTTYSDVWSFGVVLWEIATLAEQPYQGLS------NEQVLRFVMEG--------------------------------  251 (308)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHTSCCTTTTSC------HHHHHHHHHTT--------------------------------
T ss_pred             CCCCcccccccHHHHHHHHHhCCCCCCCCCC------HHHHHHHHHhC--------------------------------
Confidence            99999999999999999999985 6665442      22222221110                                


Q ss_pred             CCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhc------CCCcCc
Q 026540          157 FWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ------HPWLSL  207 (237)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~------hp~f~~  207 (237)
                               .....+..++..+.++|.+||+.||.+|||++|+++      +|+|+.
T Consensus       252 ---------~~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~~~~~~~~~  299 (308)
T d1p4oa_         252 ---------GLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFRE  299 (308)
T ss_dssp             ---------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSCTTHHH
T ss_pred             ---------CCCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCCCCcC
Confidence                     011123455678999999999999999999999998      666653

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.1e-31  Score=215.55  Aligned_cols=154  Identities=14%  Similarity=0.112  Sum_probs=121.5

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC--cccCcCCCcccchHHhhhcC
Q 026540            2 TIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ--FAEEIQTRQYRAPEVILRAG   79 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~--~~~~~~~~~~~~PE~~~~~~   79 (237)
                      .|++.++..++.|++.||+|+|+.+++||||||+|||++.++.+||+|||++......  .....+|..|++||.+.+..
T Consensus       123 ~l~~~~~~~~~~qia~gl~~lH~~~iiHrDlkp~NIL~~~~~~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~l~~~~  202 (309)
T d1fvra_         123 TLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSV  202 (309)
T ss_dssp             SSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEECCTTCEESSCEECCC----CCTTTCCHHHHHHCE
T ss_pred             CCCHHHHHHHHHHHHHHHHhhhcCCccccccccceEEEcCCCceEEccccccccccccccccceecCCcccchHHhccCC
Confidence            3678899999999999999999999999999999999999999999999998654432  22346789999999999999


Q ss_pred             CCchhhhhhhhhHHHHHhcCC-cccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccccCC
Q 026540           80 YSFSVDMWSFACTAFELATGD-MLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRLKFW  158 (237)
Q Consensus        80 ~~~~~diws~g~~l~~~~~g~-~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (237)
                      ++.++|+||||+++|+|++|. .||.+.+      .......+.+                                   
T Consensus       203 ~~~~sDvwSfGvil~ell~~~~~p~~~~~------~~~~~~~i~~-----------------------------------  241 (309)
T d1fvra_         203 YTTNSDVWSYGVLLWEIVSLGGTPYCGMT------CAELYEKLPQ-----------------------------------  241 (309)
T ss_dssp             ECHHHHHHHHHHHHHHHHTTSCCTTTTCC------HHHHHHHGGG-----------------------------------
T ss_pred             CCccceeehhHHHHHHHHhcCCCCCCCCC------HHHHHHHHHh-----------------------------------
Confidence            999999999999999999976 4665442      1111111100                                   


Q ss_pred             chhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhcC
Q 026540          159 SLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQH  202 (237)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h  202 (237)
                            ......+..+++++.+||.+||+.||++|||++|++++
T Consensus       242 ------~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~eil~~  279 (309)
T d1fvra_         242 ------GYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS  279 (309)
T ss_dssp             ------TCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ------cCCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence                  00112344567889999999999999999999999986

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=4.8e-31  Score=212.03  Aligned_cols=154  Identities=19%  Similarity=0.193  Sum_probs=121.7

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcC-----cccCcCCCcccchHHhh
Q 026540            2 TIVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQ-----FAEEIQTRQYRAPEVIL   76 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~-----~~~~~~~~~~~~PE~~~   76 (237)
                      .+++..+..++.|++.||+|+|..+++||||||+||+++.++.++++|||.+......     .....+|+.|+|||.+.
T Consensus       141 ~l~~~~~~~~~~qi~~gl~~LH~~~ivHrDLKp~NIl~~~~~~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  220 (311)
T d1t46a_         141 ALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIF  220 (311)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCeeecccccccccccccCcccccccchheeccCCCcceEeeecccChHHcCHHHhc
Confidence            4788999999999999999999999999999999999999999999999998754422     22346789999999999


Q ss_pred             hcCCCchhhhhhhhhHHHHHhcC-CcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccCccchhccc
Q 026540           77 RAGYSFSVDMWSFACTAFELATG-DMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHGDLKRIRRL  155 (237)
Q Consensus        77 ~~~~~~~~diws~g~~l~~~~~g-~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (237)
                      +..++.++|+||||+++|+|+++ .++|....      ....+..+.+.-                              
T Consensus       221 ~~~~~~~~DIwS~G~~l~ellt~g~p~~~~~~------~~~~~~~~i~~~------------------------------  264 (311)
T d1t46a_         221 NCVYTFESDVWSYGIFLWELFSLGSSPYPGMP------VDSKFYKMIKEG------------------------------  264 (311)
T ss_dssp             HCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCC------SSHHHHHHHHHT------------------------------
T ss_pred             CCCCCCcccccchHHHHHHHHhCCCCCCCCCC------HHHHHHHHHhcC------------------------------
Confidence            99999999999999999999984 55554432      112222211100                              


Q ss_pred             cCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhc
Q 026540          156 KFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ  201 (237)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  201 (237)
                                .....+...+..+.+||.+||+.||.+|||++|+++
T Consensus       265 ----------~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~~il~  300 (311)
T d1t46a_         265 ----------FRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQ  300 (311)
T ss_dssp             ----------CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ----------CCCCCcccccHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence                      011123345688999999999999999999999985

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=2.7e-30  Score=206.83  Aligned_cols=105  Identities=17%  Similarity=0.174  Sum_probs=87.6

Q ss_pred             hhhHHHHHHHHHHHHhhhhhhhh--------hcCCccCCCCCccccCCCCcEEEeecCcceecCc-------CcccCcCC
Q 026540            2 TIVEKKLKRRAKRAVANISIRRA--------SMGGIELPKPERCLDGIDMRCKVVDFGNACRANK-------QFAEEIQT   66 (237)
Q Consensus         2 ~~~~~~~~~~~~~~l~~l~~~~~--------~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~-------~~~~~~~~   66 (237)
                      +++..+..+++.+++.||+|+|+        .+++||||||+|||++.++.+||+|||++.....       ......||
T Consensus        96 ~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~~~~~~Kl~DFGl~~~~~~~~~~~~~~~~~~~gt  175 (303)
T d1vjya_          96 TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGT  175 (303)
T ss_dssp             CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTCEEEETTTTEECC----CCSC
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceEEcCCCCeEEEecCccccccCCCcceeccccceecc
Confidence            35678889999999999999997        5899999999999999999999999999865432       22346789


Q ss_pred             CcccchHHhhhcC------CCchhhhhhhhhHHHHHhcCCcccCCC
Q 026540           67 RQYRAPEVILRAG------YSFSVDMWSFACTAFELATGDMLFAPK  106 (237)
Q Consensus        67 ~~~~~PE~~~~~~------~~~~~diws~g~~l~~~~~g~~~f~~~  106 (237)
                      +.|+|||++.+..      ++.++|+|||||++|++++|..||...
T Consensus       176 ~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~~~  221 (303)
T d1vjya_         176 KRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIH  221 (303)
T ss_dssp             GGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBC
T ss_pred             cCcCChhhccccccccCCCcCcchhhhhhHHHHHHHhhCCCCCCcc
Confidence            9999999987643      466899999999999999998877543

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.96  E-value=1.2e-29  Score=202.30  Aligned_cols=159  Identities=16%  Similarity=0.103  Sum_probs=120.9

Q ss_pred             hhHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCC-----CCcEEEeecCcceecCc----------CcccCcCCC
Q 026540            3 IVEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGI-----DMRCKVVDFGNACRANK----------QFAEEIQTR   67 (237)
Q Consensus         3 ~~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~-----~~~~kl~dfg~~~~~~~----------~~~~~~~~~   67 (237)
                      +++..+..++.|++.||+|+|+.+++||||||+|||++.     ++.++++|||++.....          ......||+
T Consensus        98 ~~~~~~~~i~~q~~~~l~~lH~~giiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~GT~  177 (293)
T d1csna_          98 FSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTA  177 (293)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCT
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHCCceeccCCccceeecCcccccCCceEEcccceeEEcccCccccceeecccCceEEch
Confidence            577889999999999999999999999999999999964     56899999999975432          122457899


Q ss_pred             cccchHHhhhcCCCchhhhhhhhhHHHHHhcCCcccCCCCCCCCCChHHHHHHHHHHHCCCCHHHHhcCCCchhhhcccC
Q 026540           68 QYRAPEVILRAGYSFSVDMWSFACTAFELATGDMLFAPKSGQGFCEDEDHLALMMELIGKMPRKIAIGGAQSKDYFDRHG  147 (237)
Q Consensus        68 ~~~~PE~~~~~~~~~~~diws~g~~l~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  147 (237)
                      .|+|||.+.+..++.++|+||+|++++++++|..||.+....   ........+.......+                  
T Consensus       178 ~y~aPE~~~~~~~~~~~DiwSlG~~l~elltg~~Pf~~~~~~---~~~~~~~~i~~~~~~~~------------------  236 (293)
T d1csna_         178 RYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAA---TNKQKYERIGEKKQSTP------------------  236 (293)
T ss_dssp             TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSC---CHHHHHHHHHHHHHHSC------------------
T ss_pred             hhcCHHHhcCCCCChHHHHHHhhHHHHHHHhCCCcCCCccch---hHHHHHHHHHhccCCCC------------------
Confidence            999999999989999999999999999999999999765321   12222222111100000                  


Q ss_pred             ccchhccccCCchhHHhhhhcCCCHHhHHHHHHHHHhccccCCCCCCCHHHHhc
Q 026540          148 DLKRIRRLKFWSLDRLLVDKYRFSETDAREFAEFLVPLLDFTPEKRPTAQQCLQ  201 (237)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  201 (237)
                                  ..       .....+++++.+++..|+..+|.+||+.+.+.+
T Consensus       237 ------------~~-------~l~~~~p~~l~~ii~~~~~~~~~~rP~y~~l~~  271 (293)
T d1csna_         237 ------------LR-------ELCAGFPEEFYKYMHYARNLAFDATPDYDYLQG  271 (293)
T ss_dssp             ------------HH-------HHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHH
T ss_pred             ------------hH-------HhcCCCCHHHHHHHHHHhcCCcccCcCHHHHHH
Confidence                        00       012234678999999999999999999776654

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.38  E-value=1.2e-14  Score=107.48  Aligned_cols=82  Identities=7%  Similarity=-0.098  Sum_probs=60.2

Q ss_pred             hHHHHHHHHHHHHhhhhhhhhhcCCccCCCCCccccCCCCcEEEeecCcceecCcCcccCcCCCcccch--H---Hhhhc
Q 026540            4 VEKKLKRRAKRAVANISIRRASMGGIELPKPERCLDGIDMRCKVVDFGNACRANKQFAEEIQTRQYRAP--E---VILRA   78 (237)
Q Consensus         4 ~~~~~~~~~~~~l~~l~~~~~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~P--E---~~~~~   78 (237)
                      .+..+..++.|++.++.|+|..+++||||||+|||++.++ ++++|||.+.....+...     .|...  +   .....
T Consensus       101 ~~~~~~~i~~ql~~~l~~lH~~giiHrDiKP~NILv~~~~-~~liDFG~a~~~~~~~~~-----~~l~rd~~~~~~~f~r  174 (191)
T d1zara2         101 RVENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVSEEG-IWIIDFPQSVEVGEEGWR-----EILERDVRNIITYFSR  174 (191)
T ss_dssp             CCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEETTE-EEECCCTTCEETTSTTHH-----HHHHHHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHhhCCEEEccCChhheeeeCCC-EEEEECCCcccCCCCCcH-----HHHHHHHHHHHHHHcC
Confidence            4456788999999999999999999999999999998654 889999998665432211     12111  0   12234


Q ss_pred             CCCchhhhhhhhh
Q 026540           79 GYSFSVDMWSFAC   91 (237)
Q Consensus        79 ~~~~~~diws~g~   91 (237)
                      .|+.++|+||..-
T Consensus       175 ~y~~~~d~~s~~~  187 (191)
T d1zara2         175 TYRTEKDINSAID  187 (191)
T ss_dssp             HHCCCCCHHHHHH
T ss_pred             CCCCcccHHHHHH
Confidence            5778899999653

>d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Homoserine kinase ThrB
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=92.01  E-value=0.029  Score=42.60  Aligned_cols=31  Identities=16%  Similarity=-0.077  Sum_probs=27.3

Q ss_pred             hhcCCccCCCCCccccCCCCcEEEeecCcce
Q 026540           24 ASMGGIELPKPERCLDGIDMRCKVVDFGNAC   54 (237)
Q Consensus        24 ~~~~~h~d~kp~Nili~~~~~~kl~dfg~~~   54 (237)
                      ..+++|.|+.+.|++++.+...-++||+.++
T Consensus       182 ~~giIHgDl~~dNvl~~~~~v~gvIDF~~~~  212 (316)
T d2ppqa1         182 PAGVIHADLFQDNVFFLGDELSGLIDFYFAC  212 (316)
T ss_dssp             CEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred             ccccccCCcchhhhhcccccceeEecccccc
Confidence            4677899999999999998878999999764

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=88.27  E-value=0.08  Score=38.49  Aligned_cols=29  Identities=7%  Similarity=-0.166  Sum_probs=24.8

Q ss_pred             hcCCccCCCCCccccCCCCcEEEeecCcc
Q 026540           25 SMGGIELPKPERCLDGIDMRCKVVDFGNA   53 (237)
Q Consensus        25 ~~~~h~d~kp~Nili~~~~~~kl~dfg~~   53 (237)
                      ...+|.|+.|.||+++.+..+.|+||+.+
T Consensus       175 ~~liHgD~~~~Nvl~~~~~~~~iID~~~~  203 (255)
T d1nd4a_         175 LVVTHGDACLPNIMVENGRFSGFIDCGRL  203 (255)
T ss_dssp             EEEECSSCCGGGEEEETTEEEEECCCTTC
T ss_pred             ceEEeCCCCCcceEEeCCceEEEEEchhc
Confidence            44689999999999998777789999865

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=85.35  E-value=0.14  Score=37.33  Aligned_cols=28  Identities=7%  Similarity=-0.082  Sum_probs=24.2

Q ss_pred             cCCccCCCCCccccCCCCcEEEeecCcc
Q 026540           26 MGGIELPKPERCLDGIDMRCKVVDFGNA   53 (237)
Q Consensus        26 ~~~h~d~kp~Nili~~~~~~kl~dfg~~   53 (237)
                      ..+|.|+.|.||+++.++.+.++||+.+
T Consensus       184 ~l~HgD~~~~Nil~~~~~~~~lIDwe~a  211 (263)
T d1j7la_         184 VFSHGDLGDSNIFVKDGKVSGFIDLGRS  211 (263)
T ss_dssp             EEECSCCCTTSEEEETTEEEEECCCTTC
T ss_pred             EEEEeeccCcceeecCCceEEEeechhc
Confidence            4679999999999998777789999865