BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026541
(237 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P50876|R144A_HUMAN Probable E3 ubiquitin-protein ligase RNF144A OS=Homo sapiens
GN=RNF144A PE=1 SV=2
Length = 292
Score = 67.0 bits (162), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 89/213 (41%), Gaps = 12/213 (5%)
Query: 35 IDGTFTCDICIEPMSVNNKFKNNNLCTHPFCQDCTVKYIEVKVRDNNTAKIECPGLHC-- 92
+D +C +C+ V + C FC C +Y+E+ +++ I CP C
Sbjct: 14 LDPLVSCKLCLGEYPVE-QMTTIAQCQCIFCTLCLKQYVELLIKEGLETAISCPDAACPK 72
Query: 93 EQFLDPFACKHTIPSSLFLKWCDHLCEDYVLGFE--RSYCPNRNCMAVMVNECEGIGRVK 150
+ L + + + + ++ E VL F+ R++CP C AV + G+ +
Sbjct: 73 QGHLQENEIECMVAAEIMQRYKKLQFEREVL-FDPCRTWCPASTCQAVCQLQDVGLQTPQ 131
Query: 151 KAQCPKCKQWFCFQCKLAWHAGYRCEESGN---LRDRNDIAFGKLLEKMNWTRCPGCGNC 207
QC C+ FC CK +WH G C E+ L AF + RCP C
Sbjct: 132 PVQCKACRMEFCSTCKASWHPGQGCPETMPITFLPGETSAAFKMEEDDAPIKRCPKCKVY 191
Query: 208 IERKKGCRIMF---CRFIFLSLCLCIFSNRYLL 237
IER +GC M C+ F CL + +LL
Sbjct: 192 IERDEGCAQMMCKNCKHAFCWYCLESLDDDFLL 224
>sp|A4IIY1|R144A_XENTR Probable E3 ubiquitin-protein ligase RNF144A OS=Xenopus tropicalis
GN=rnf144a PE=2 SV=1
Length = 292
Score = 65.9 bits (159), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 91/212 (42%), Gaps = 10/212 (4%)
Query: 35 IDGTFTCDICIEPMSVNNKFKNNNLCTHPFCQDCTVKYIEVKVRDNNTAKIECPGLHCEQ 94
++ +C +C+ +V + C FC C +Y+E+ +++ I CP C +
Sbjct: 14 LEPLVSCKLCLGEYTVE-QMTTIAQCQCIFCTLCLKQYVELLIKEGLETAISCPDASCPK 72
Query: 95 --FLDPFACKHTIPSSLFLKWCDHLCEDYVLGFE-RSYCPNRNCMAVMVNECEGIGRVKK 151
L + + + + K+ E +L R++CP+ +C AV + +GI +
Sbjct: 73 RGHLQENEIECMVAAEIMQKYKKLQFEKEILLDPCRTWCPSSSCQAVCKLQEKGIQNPQL 132
Query: 152 AQCPKCKQWFCFQCKLAWHAGYRCEESGN---LRDRNDIAFGKLLEKMNWTRCPGCGNCI 208
QC C FC CK WH G C E+ L + F L + + RCP C I
Sbjct: 133 VQCSACDIEFCSACKANWHPGQGCPENMAITFLPGDSSSFFKSLEDDVPIKRCPKCKVYI 192
Query: 209 ERKKGCRIMF---CRFIFLSLCLCIFSNRYLL 237
ER +GC M C+ F CL + +LL
Sbjct: 193 ERDEGCAQMMCKNCKHAFCWYCLESLDDDFLL 224
>sp|Q4KLT0|RN217_XENLA Probable E3 ubiquitin-protein ligase RNF217 OS=Xenopus laevis
GN=rnf217 PE=2 SV=1
Length = 282
Score = 61.2 bits (147), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 81/191 (42%), Gaps = 20/191 (10%)
Query: 39 FTCDICIEPMSVNNKFKNNNLCTHPFCQDCTVKYIEVKVRDNNTAKIECPGLHCEQFLDP 98
+C +C+E S+ K C P C +C +Y+ +V+ A+I+CP C + LD
Sbjct: 1 MSCRVCLEDRSI----KPLPCCKKPVCDECLKRYLSSQVQLGQ-AEIQCPITECNKHLDE 55
Query: 99 FACKHTIPSSLFLKWCDHLCEDYVLGFERSYCPNRNCMAVMVNECEGIGRVK-----KAQ 153
+++P +K+ + E + CP + K K Q
Sbjct: 56 STILYSLPHDDIIKY-KYFLELSRMDSSTKPCPQCKHFTTFKRKTHIPNPTKSENKLKIQ 114
Query: 154 CPKCKQWFCFQCKLAWHAGYRCEE--SGNLRDR---NDIAFGKLLEKMNWTRCPGCGNCI 208
CP C+ +CF+C WH G C E G+ R N+I G + N +CP C I
Sbjct: 115 CPSCQFIWCFRCHAPWHEGVNCREYKKGDKLLRHWANEIEHG----QRNAQKCPRCKVHI 170
Query: 209 ERKKGCRIMFC 219
+R +GC M C
Sbjct: 171 QRTEGCDHMTC 181
>sp|A5PK27|R144B_BOVIN E3 ubiquitin-protein ligase RNF144B OS=Bos taurus GN=RNF144B PE=2
SV=1
Length = 304
Score = 60.8 bits (146), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 79/187 (42%), Gaps = 7/187 (3%)
Query: 39 FTCDICIEPMSVNNKFKNNNLCTHPFCQDCTVKYIEVKVRDNNTAKIECPGLHC--EQFL 96
TC +C+ S++ K C FC C +Y+++ +R+ + I CP + C L
Sbjct: 29 VTCKLCLCEQSLD-KMTTLQECRCIFCTACLKQYMQLAIREGCGSPITCPDMVCLNHGTL 87
Query: 97 DPFACKHTIPSSLFLKWCDHLCEDYV-LGFERSYCPNRNCMAVMVNECEGIGRVKKAQCP 155
+P F + E V L R++CP +C V G+ +CP
Sbjct: 88 QEAEIACLVPVDQFQLYQRLKFEREVHLDPCRTWCPVADCQTVCPVATSDPGQPVLVECP 147
Query: 156 KCKQWFCFQCKLAWHAGYRCEES--GNLRDRNDIAFGKLLEKMNWTRCPGCGNCIERKKG 213
C FC CK AWHA C +S G L + FG + +CP C IER +G
Sbjct: 148 SCHLKFCSCCKDAWHAEVSCRDSQPGILPTEHGTLFGTETDA-PIKQCPVCRVYIERNEG 206
Query: 214 CRIMFCR 220
C M C+
Sbjct: 207 CAQMMCK 213
>sp|Q925F3|R144A_MOUSE Probable E3 ubiquitin-protein ligase RNF144A OS=Mus musculus
GN=Rnf144a PE=1 SV=1
Length = 292
Score = 60.5 bits (145), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 85/213 (39%), Gaps = 12/213 (5%)
Query: 35 IDGTFTCDICIEPMSVNNKFKNNNLCTHPFCQDCTVKYIEVKVRDNNTAKIECPGLHC-- 92
+D +C +C+ + C FC C +Y+E+ +++ I CP C
Sbjct: 14 LDPLVSCKLCLGEYPAE-QMTTIAQCQCIFCTLCLKQYVELLIKEGLETAISCPDAACPK 72
Query: 93 EQFLDPFACKHTIPSSLFLKWCDHLCEDYVLGFE--RSYCPNRNCMAVMVNECEGIGRVK 150
+ L + + + + ++ E VL F+ R++CP C AV + G+ +
Sbjct: 73 QGHLQENEIECMVAAEIMQRYKKLQFEREVL-FDPCRTWCPASTCQAVCQLQDIGLQTPQ 131
Query: 151 KAQCPKCKQWFCFQCKLAWHAGYRCEESGN---LRDRNDIAFGKLLEKMNWTRCPGCGNC 207
QC C FC CK WH G C E+ L AF RCP C
Sbjct: 132 LVQCKACDMEFCSACKARWHPGQGCPETMPITFLPGETSSAFKMEEGDAPIKRCPKCRVY 191
Query: 208 IERKKGCRIMF---CRFIFLSLCLCIFSNRYLL 237
IER +GC M C+ F CL + +LL
Sbjct: 192 IERDEGCAQMMCKNCKHAFCWYCLESLDDDFLL 224
>sp|Q7Z419|R144B_HUMAN E3 ubiquitin-protein ligase RNF144B OS=Homo sapiens GN=RNF144B PE=1
SV=1
Length = 303
Score = 60.5 bits (145), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 78/187 (41%), Gaps = 7/187 (3%)
Query: 39 FTCDICIEPMSVNNKFKNNNLCTHPFCQDCTVKYIEVKVRDNNTAKIECPGLHC--EQFL 96
TC +C+ S++ K C FC C +Y+++ +R+ + I CP + C L
Sbjct: 28 ITCKLCLCEQSLD-KMTTLQECQCIFCTACLKQYMQLAIREGCGSPITCPDMVCLNHGTL 86
Query: 97 DPFACKHTIPSSLFLKWCDHLCEDYV-LGFERSYCPNRNCMAVMVNECEGIGRVKKAQCP 155
+P F + E V L R++CP +C V G+ +CP
Sbjct: 87 QEAEIACLVPVDQFQLYQRLKFEREVHLDPYRTWCPVADCQTVCPVASSDPGQPVLVECP 146
Query: 156 KCKQWFCFQCKLAWHAGYRCEESGN--LRDRNDIAFGKLLEKMNWTRCPGCGNCIERKKG 213
C FC CK AWHA C +S L + FG E +CP C IER +G
Sbjct: 147 SCHLKFCSCCKDAWHAEVSCRDSQPIVLPTEHRALFGTDAEA-PIKQCPVCRVYIERNEG 205
Query: 214 CRIMFCR 220
C M C+
Sbjct: 206 CAQMMCK 212
>sp|Q6DH94|R1442_DANRE Probable E3 ubiquitin-protein ligase RNF144A-B OS=Danio rerio
GN=rnf144ab PE=2 SV=1
Length = 293
Score = 60.1 bits (144), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 92/221 (41%), Gaps = 25/221 (11%)
Query: 34 DIDGTFTCDICIEPMSVNNKFKNNNLCTHPFCQDCTVKYIEVKVRDNNTAKIECPGLHCE 93
D+ +C +C+ + + + C FC C +Y+E+ +++ I CP C
Sbjct: 13 DLAPLLSCKLCLGEFPLE-QMTTISQCQCIFCSLCLKQYVELLIKEGLETAISCPDSACP 71
Query: 94 QFLDPFACKHTIPSSLFLKWCDHLCEDYV-LGFER--------SYCPNRNCMAV-MVNEC 143
+ H + + + + + Y L FER ++CP+ +C AV +NE
Sbjct: 72 KQ------GHLLENEIECMVAGEVMQHYKRLQFEREVLLDPCRTWCPSSSCQAVCQLNEA 125
Query: 144 EGIGRVKKAQCPKCKQWFCFQCKLAWHAGYRCEE----SGNLRDRNDIAFGKLLEKMNWT 199
E + + QCP+C FC C+ H G C+E + L N ++
Sbjct: 126 E-VQLPQPVQCPECSLRFCSACRADCHTGQACQEMLPITTFLPGENGSNLKSQEDEAPIK 184
Query: 200 RCPGCGNCIERKKGCRIMF---CRFIFLSLCLCIFSNRYLL 237
RCP C IER +GC M C+ F CL + +LL
Sbjct: 185 RCPKCKVYIERDEGCAQMMCKNCKHAFCWYCLESLDDDFLL 225
>sp|Q9Z1K6|ARI2_MOUSE E3 ubiquitin-protein ligase ARIH2 OS=Mus musculus GN=Arih2 PE=2
SV=1
Length = 492
Score = 57.4 bits (137), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 73/170 (42%), Gaps = 20/170 (11%)
Query: 60 CTHPFCQDCTVKYIEVKVRDNNTAKIECPGLHC-----EQFLDPFACKHTIPSS-LFLKW 113
C H FC+ C ++ V V+D I C C E F+ P +P+ L K+
Sbjct: 155 CQHQFCRSCWEQHCSVLVKDGVGVGISCMAQDCPLRTPEDFVFPL-----LPNEELRDKY 209
Query: 114 CDHLCEDYVLG-FERSYCPNRNC-MAVMVNECEGIGRVKKAQCPKCKQWFCFQCKLAWHA 171
+L DYV F+ CP +C M + V E R ++ QC +C + FCF+C+ +HA
Sbjct: 210 RRYLFRDYVESHFQLQLCPGADCPMVIRVQE----PRARRVQCNRCSEVFCFKCRQMYHA 265
Query: 172 GYRCEESGNLRDR--NDIAFGKLLEKMNWTRCPGCGNCIERKKGCRIMFC 219
C + +D + CP C CIE+ GC M C
Sbjct: 266 PTDCATIRKWLTKCADDSETANYISAHT-KDCPKCNICIEKNGGCNHMQC 314
>sp|Q8BKD6|R144B_MOUSE E3 ubiquitin-protein ligase RNF144B OS=Mus musculus GN=Rnf144b PE=2
SV=2
Length = 301
Score = 57.0 bits (136), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 85/215 (39%), Gaps = 11/215 (5%)
Query: 9 IENRECPRQEKENLRQEEIKEEELEDIDGTFTCDICIEPMSVNNKFKNNNLCTHPFCQDC 68
++ +C EN ++ L TC +C+ S++ K C FC C
Sbjct: 4 VDGLQCLTMTAENPPSGDLIPAPL------VTCKLCLCEQSLD-KMTMLQECQCIFCTPC 56
Query: 69 TVKYIEVKVRDNNTAKIECPGLHC--EQFLDPFACKHTIPSSLFLKWCDHLCEDYV-LGF 125
+Y+ + +R+ + I CP + C L +P F + E V +
Sbjct: 57 LKQYMVLSIREGCGSPITCPDMVCLNHGTLQETEIACLVPLDEFQLYQRLKFEREVHMDP 116
Query: 126 ERSYCPNRNCMAVMVNECEGIGRVKKAQCPKCKQWFCFQCKLAWHAGYRCEESGNLRDRN 185
R++CP +C V G+ +CP C FC CK AWH C +S + +
Sbjct: 117 LRTWCPVADCQTVCHISAGDPGQPVLVECPSCHLKFCSCCKDAWHEESSCRDSQSAMPEH 176
Query: 186 DIAFGKLLEKMNWTRCPGCGNCIERKKGCRIMFCR 220
FG + +CP C IER +GC M C+
Sbjct: 177 GALFGTDADA-PIKQCPVCRIYIERNEGCAQMMCK 210
>sp|Q9JI90|RNF14_MOUSE E3 ubiquitin-protein ligase RNF14 OS=Mus musculus GN=Rnf14 PE=2
SV=2
Length = 485
Score = 55.8 bits (133), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 74/189 (39%), Gaps = 33/189 (17%)
Query: 60 CTHPFCQDCTVKYIEVKVRDNNTAKIECPGLHCEQFLDPFACKHTIPSSLFLKWCDHLCE 119
C H +C+ C Y E++++D + CP C P K + + LF ++ L +
Sbjct: 239 CKHVYCKACLKDYFEIQIKDGQVKCLNCPEPQCPSVATPGQVKELVEADLFARYDRLLLQ 298
Query: 120 DYV-LGFERSYCPNRNCMAVMVNECEGIGRVKKAQCPKCKQWFCFQCKLAWHAGYRCEES 178
+ L + YCP C ++ E G A C C FC C+L +H C+ +
Sbjct: 299 STLDLMADVVYCPRPCCQLPVMQEPGGT----MAICSSCNFAFCTLCRLTYHGLSPCKVT 354
Query: 179 G----NLRD---RNDIAFGKLLEK---------------------MNWTRCPGCGNCIER 210
+LR+ + D A + LE+ N CP CG I++
Sbjct: 355 AEKLIDLRNEYLQADEATKRFLEQRYGKRVIQKALEEMESKDWLEKNSKSCPCCGTPIQK 414
Query: 211 KKGCRIMFC 219
GC M C
Sbjct: 415 LDGCNKMTC 423
>sp|Q5RFV4|R1441_DANRE Probable E3 ubiquitin-protein ligase RNF144A-A OS=Danio rerio
GN=rnf144aa PE=3 SV=1
Length = 293
Score = 55.8 bits (133), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 86/213 (40%), Gaps = 11/213 (5%)
Query: 35 IDGTFTCDICIEPMSVNNKFKNNNLCTHPFCQDCTVKYIEVKVRDNNTAKIECPGLHCEQ 94
+D +C +C+ + + C FC C +Y+E+ +++ I CP C +
Sbjct: 14 LDPLVSCKLCLGEFPLE-QMTTITQCQCVFCTMCLKQYVELLIKEGFETAISCPDSACPK 72
Query: 95 --FLDPFACKHTIPSSLFLKWCDHLCE-DYVLGFERSYCPNRNCMAVMVNECEGIGRVKK 151
L + + + + ++ E + +L R++CP+ C AV + +
Sbjct: 73 RGHLQENEIECMVATEIMQRYRKLQFEKEVLLDPSRTWCPSSTCQAVCQLKESDTVLPQL 132
Query: 152 AQCPKCKQWFCFQCKLAWHAGYRCEE----SGNLRDRNDIAFGKLLEKMNWTRCPGCGNC 207
+C C FC CK +WH C+E + L + F + RCP C
Sbjct: 133 VRCSVCTLEFCSACKASWHPDQDCQENVPITSFLPGESSSFFKADDDDAPIKRCPKCKVY 192
Query: 208 IERKKGCRIMF---CRFIFLSLCLCIFSNRYLL 237
IER +GC M C+ F CL + +LL
Sbjct: 193 IERDEGCAQMMCKNCKHAFCWYCLESLDDDFLL 225
>sp|O95376|ARI2_HUMAN E3 ubiquitin-protein ligase ARIH2 OS=Homo sapiens GN=ARIH2 PE=1
SV=1
Length = 493
Score = 55.5 bits (132), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 73/170 (42%), Gaps = 20/170 (11%)
Query: 60 CTHPFCQDCTVKYIEVKVRDNNTAKIECPGLHC-----EQFLDPFACKHTIPSS-LFLKW 113
C H FC+ C ++ V V+D + C C E F+ P +P+ L K+
Sbjct: 156 CQHQFCRSCWEQHCSVLVKDGVGVGVSCMAQDCPLRTPEDFVFPL-----LPNEELREKY 210
Query: 114 CDHLCEDYVLG-FERSYCPNRNC-MAVMVNECEGIGRVKKAQCPKCKQWFCFQCKLAWHA 171
+L DYV ++ CP +C M + V E R ++ QC +C + FCF+C+ +HA
Sbjct: 211 RRYLFRDYVESHYQLQLCPGADCPMVIRVQE----PRARRVQCNRCNEVFCFKCRQMYHA 266
Query: 172 GYRCEESGNLRDR--NDIAFGKLLEKMNWTRCPGCGNCIERKKGCRIMFC 219
C + +D + CP C CIE+ GC M C
Sbjct: 267 PTDCATIRKWLTKCADDSETANYISAHT-KDCPKCNICIEKNGGCNHMQC 315
>sp|Q9UBS8|RNF14_HUMAN E3 ubiquitin-protein ligase RNF14 OS=Homo sapiens GN=RNF14 PE=1
SV=1
Length = 474
Score = 54.3 bits (129), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 75/192 (39%), Gaps = 39/192 (20%)
Query: 60 CTHPFCQDCTVKYIEVKVRDNNTAKIECPGLHCEQFLDPFACKHTIPSSLFLKWCDHLCE 119
C H +C+ C Y E+++RD + CP C P K + + LF ++ L +
Sbjct: 238 CRHVYCKACLKDYFEIQIRDGQVQCLNCPEPKCPSVATPGQVKELVEAELFARYDRLLLQ 297
Query: 120 DYV-LGFERSYCPNRNCMAVMVNE---CEGIGRVKKAQCPKCKQWFCFQCKLAWHAGYRC 175
+ L + YCP C ++ E GI C C FC C+L +H C
Sbjct: 298 SSLDLMADVVYCPRPCCQLPVMQEPGCTMGI-------CSSCNFAFCTLCRLTYHGVSPC 350
Query: 176 EESG----NLRDRN-----------DIAFG-----KLLEKM--------NWTRCPGCGNC 207
+ + +LR+ D +G K LE+M N CP CG
Sbjct: 351 KVTAEKLMDLRNEYLQADEANKRLLDQRYGKRVIQKALEEMESKEWLEKNSKSCPCCGTP 410
Query: 208 IERKKGCRIMFC 219
IE+ GC M C
Sbjct: 411 IEKLDGCNKMTC 422
>sp|Q9LVX0|ARI3_ARATH Probable E3 ubiquitin-protein ligase ARI3 OS=Arabidopsis thaliana
GN=ARI3 PE=2 SV=1
Length = 537
Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 79/202 (39%), Gaps = 38/202 (18%)
Query: 38 TFTCDICIE---PMSVNNKFKNNNLCTHPFCQDCTVKYIEVKVRDNNTAKIECPGLHCEQ 94
T CD+C+E P +V + + C H FC DC + + VK+ + + +I C C+
Sbjct: 118 TMKCDVCMEDDLPSNVMTRME----CGHRFCNDCWIGHFTVKINEGESKRILCMAHECKA 173
Query: 95 FLDPFACKHTIPSSLFLKWCDHLCEDYVLGFER-SYCPNRNCMAVMVNECEGIGRVKKAQ 153
D + + L ++ L E YV +CP++ + + E V +
Sbjct: 174 ICDEDVVRKLVSPELADRYDRFLIESYVEDNNMVKWCPSKPHCGSAIRKIEDGHDVVEVG 233
Query: 154 CPKCKQWFCFQCKLAWHA----------GYRCEESGNLRDRNDIAFGKLLEKMNWTR--- 200
C C FCF C H+ +CE+ E +NW
Sbjct: 234 CS-CGLQFCFSCLSESHSPCSCLMWKLWKKKCEDES--------------ETVNWITVNT 278
Query: 201 --CPGCGNCIERKKGCRIMFCR 220
CP C I+++ GC +M C+
Sbjct: 279 KLCPKCSKPIQKRDGCNLMTCK 300
>sp|Q8IWT3|CUL9_HUMAN Cullin-9 OS=Homo sapiens GN=CUL9 PE=1 SV=2
Length = 2517
Score = 52.0 bits (123), Expect = 3e-06, Method: Composition-based stats.
Identities = 45/190 (23%), Positives = 70/190 (36%), Gaps = 16/190 (8%)
Query: 41 CDICIEPMSVNNKFKNNNLCTHPFCQDCTVKYIEVKVRDNNTAKIECPGLHC-EQFLDPF 99
C +C+ P+ ++ + C H C+ C +Y+ ++ N CP C Q F
Sbjct: 2070 CPVCVSPLGCDDDLPSL-CCMHYCCKSCWNEYLTTRIEQNLVLNCTCPIADCPAQPTGAF 2128
Query: 100 ACKHTIPSSLFLKWCDHLCEDYVLGFER-SYCPN-RNCMAVMVNECEGIGRVKKAQCPKC 157
+ K+ L YV ++C N + C ++ + G G C KC
Sbjct: 2129 IRAIVSSPEVISKYEKALLRGYVESCSNLTWCTNPQGCDRILCRQGLGCG----TTCSKC 2184
Query: 158 KQWFCFQCKL--------AWHAGYRCEESGNLRDRNDIAFGKLLEKMNWTRCPGCGNCIE 209
CF C H ++ G + A K L K+ RCP C IE
Sbjct: 2185 GWASCFNCSFPEAHYPASCGHMSQWVDDGGYYDGMSVEAQSKHLAKLISKRCPSCQAPIE 2244
Query: 210 RKKGCRIMFC 219
+ +GC M C
Sbjct: 2245 KNEGCLHMTC 2254
>sp|O76924|ARI2_DROME Protein ariadne-2 OS=Drosophila melanogaster GN=ari-2 PE=2 SV=1
Length = 509
Score = 52.0 bits (123), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 66/164 (40%), Gaps = 8/164 (4%)
Query: 60 CTHPFCQDCTVKYIEVKVRDNNTAKIECPGLHCE-QFLDPFACKHTIPSSLFLKWCDHLC 118
C H FC+DC Y E ++ + +I C C + + + K+
Sbjct: 170 CGHSFCKDCWTIYFETQIFQGISTQIGCMAQMCNVRVPEDLVLTLVTRPVMRDKYQQFAF 229
Query: 119 EDYVLGF-ERSYCPNRNCMAVMVNECEGIGRVKKAQCPKCKQWFCFQCKLAWHAGYRCEE 177
+DYV E +CP NC ++V E K+A C C FCF+C + +HA C+
Sbjct: 230 KDYVKSHPELRFCPGPNCQ-IIVQSSEI--SAKRAICKACHTGFCFRCGMDYHAPTDCQV 286
Query: 178 SGNLRDR--NDIAFGKLLEKMNWTRCPGCGNCIERKKGCRIMFC 219
+ +D + CP C CIE+ GC M C
Sbjct: 287 IKKWLTKCADDSETANYISAHT-KDCPKCHICIEKNGGCNHMQC 329
>sp|P0C8K8|ARI6_ARATH Putative E3 ubiquitin-protein ligase ARI6 OS=Arabidopsis thaliana
GN=ARI6 PE=5 SV=1
Length = 552
Score = 51.6 bits (122), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 76/213 (35%), Gaps = 43/213 (20%)
Query: 39 FTCDICIEPMSVNNKFKNNNLCTHPFCQDCTVKYIEVKVRDNNTAKIECPGLHCEQFLDP 98
FTC IC E + + C HPFC C YI + D PG C P
Sbjct: 131 FTCGICFESYPLEETISVS--CGHPFCATCWTGYISTSINDG-------PG--CLMLKCP 179
Query: 99 FACKHTIPSSLFLKWCDHLC-----EDYVLGFERSY---------CPNRNCMAVMVNECE 144
+ C P+++ D+LC E Y F RSY CP C ++
Sbjct: 180 YPC---CPAAIGRDMIDNLCSKEDKERYYRYFLRSYVEVNREMKCCPAPGCEHA-ISFAA 235
Query: 145 GIGRVKKAQCPKCKQWFCFQCKLAWHAGYRCEESGNLRDRNDIAFGKLLEKMNWT----- 199
G C C FC+ C H C+ G +N E MNW
Sbjct: 236 GTESNYDVSC-LCSHSFCWNCSEEAHRPVDCDTVGKWILKNSTE----SENMNWILANSK 290
Query: 200 RCPGCGNCIERKKGCRIMF----CRFIFLSLCL 228
CP C IE+ GC M C+F F LCL
Sbjct: 291 PCPKCKRPIEKNHGCMHMTCTPPCKFEFCWLCL 323
>sp|Q9Y4X5|ARI1_HUMAN E3 ubiquitin-protein ligase ARIH1 OS=Homo sapiens GN=ARIH1 PE=1
SV=2
Length = 557
Score = 51.6 bits (122), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 72/184 (39%), Gaps = 10/184 (5%)
Query: 41 CDICIEPMSVNNKFKNNNLCTHPFCQDCTVKYIEVKVRDNNTAK-IECPGLHCEQFLDPF 99
C IC ++ N + C H FC C +Y+ K+ + + I CP C+ +D
Sbjct: 186 CQICY--LNYPNSYFTGLECGHKFCMQCWSEYLTTKIMEEGMGQTISCPAHGCDILVDDN 243
Query: 100 ACKHTIPSSLFLKWCDHLCEDYVLGFER--SYCPNRNCMAVMVNECEGIGRVKKAQCPKC 157
I S HL + + R +CP +C V+ + K +C KC
Sbjct: 244 TVMRLITDSKVKLKYQHLITNSFVECNRLLKWCPAPDCHHVVKVQ---YPDAKPVRC-KC 299
Query: 158 KQWFCFQCKLAWHAGYRCEESGNLRDR-NDIAFGKLLEKMNWTRCPGCGNCIERKKGCRI 216
+ FCF C WH +C+ + +D + N CP C IE+ GC
Sbjct: 300 GRQFCFNCGENWHDPVKCKWLKKWIKKCDDDSETSNWIAANTKECPKCHVTIEKDGGCNH 359
Query: 217 MFCR 220
M CR
Sbjct: 360 MVCR 363
>sp|Q9Z1K5|ARI1_MOUSE E3 ubiquitin-protein ligase ARIH1 OS=Mus musculus GN=Arih1 PE=2
SV=3
Length = 555
Score = 51.6 bits (122), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 72/184 (39%), Gaps = 10/184 (5%)
Query: 41 CDICIEPMSVNNKFKNNNLCTHPFCQDCTVKYIEVKVRDNNTAK-IECPGLHCEQFLDPF 99
C IC ++ N + C H FC C +Y+ K+ + + I CP C+ +D
Sbjct: 184 CQICY--LNYPNSYFTGLECGHKFCMQCWSEYLTTKIMEEGMGQTISCPAHGCDILVDDN 241
Query: 100 ACKHTIPSSLFLKWCDHLCEDYVLGFER--SYCPNRNCMAVMVNECEGIGRVKKAQCPKC 157
I S HL + + R +CP +C V+ + K +C KC
Sbjct: 242 TVMRLITDSKVKLKYQHLITNSFVECNRLLKWCPAPDCHHVVKVQ---YPDAKPVRC-KC 297
Query: 158 KQWFCFQCKLAWHAGYRCEESGNLRDR-NDIAFGKLLEKMNWTRCPGCGNCIERKKGCRI 216
+ FCF C WH +C+ + +D + N CP C IE+ GC
Sbjct: 298 GRQFCFNCGENWHDPVKCKWLKKWIKKCDDDSETSNWIAANTKECPKCHVTIEKDGGCNH 357
Query: 217 MFCR 220
M CR
Sbjct: 358 MVCR 361
>sp|A2VEA3|ARI1_BOVIN E3 ubiquitin-protein ligase ARIH1 OS=Bos taurus GN=ARIH1 PE=2 SV=1
Length = 555
Score = 51.6 bits (122), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 72/184 (39%), Gaps = 10/184 (5%)
Query: 41 CDICIEPMSVNNKFKNNNLCTHPFCQDCTVKYIEVKVRDNNTAK-IECPGLHCEQFLDPF 99
C IC ++ N + C H FC C +Y+ K+ + + I CP C+ +D
Sbjct: 184 CQICY--LNYPNSYFTGLECGHKFCMQCWSEYLTTKIMEEGMGQTISCPAHGCDILVDDN 241
Query: 100 ACKHTIPSSLFLKWCDHLCEDYVLGFER--SYCPNRNCMAVMVNECEGIGRVKKAQCPKC 157
I S HL + + R +CP +C V+ + K +C KC
Sbjct: 242 TVMRLITDSKVKLKYQHLITNSFVECNRLLKWCPAPDCHHVVKVQ---YPDAKPVRC-KC 297
Query: 158 KQWFCFQCKLAWHAGYRCEESGNLRDR-NDIAFGKLLEKMNWTRCPGCGNCIERKKGCRI 216
+ FCF C WH +C+ + +D + N CP C IE+ GC
Sbjct: 298 GRQFCFNCGENWHDPVKCKWLKKWIKKCDDDSETSNWIAANTKECPKCHVTIEKDGGCNH 357
Query: 217 MFCR 220
M CR
Sbjct: 358 MVCR 361
>sp|B1H1E4|ARI1_XENTR E3 ubiquitin-protein ligase arih1 OS=Xenopus tropicalis GN=arih1
PE=2 SV=1
Length = 529
Score = 50.8 bits (120), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 73/184 (39%), Gaps = 10/184 (5%)
Query: 41 CDICIEPMSVNNKFKNNNLCTHPFCQDCTVKYIEVKVRDNNTAK-IECPGLHCEQFLDPF 99
C IC ++ N + C H FC C +Y+ K+ + + I CP C+ +D
Sbjct: 158 CQICY--LNYPNSYFTGLECGHKFCMQCWSEYLTTKIIEEGMGQTISCPAHGCDILVDDN 215
Query: 100 ACKHTIPSSLFLKWCDHLCEDYVLGFER--SYCPNRNCMAVMVNECEGIGRVKKAQCPKC 157
I S HL + + R +CP +C V+ + K +C KC
Sbjct: 216 TVMRLITDSKVKLKYQHLITNSFVECNRLLKWCPAPDCHHVVKVQ---YPDAKPVRC-KC 271
Query: 158 KQWFCFQCKLAWHAGYRCEESGN-LRDRNDIAFGKLLEKMNWTRCPGCGNCIERKKGCRI 216
+ FCF C WH +C+ ++ +D + N CP C IE+ GC
Sbjct: 272 GRQFCFNCGENWHDPVKCKWLKKWIKKCDDDSETSNWIAANTKECPKCHVTIEKDGGCNH 331
Query: 217 MFCR 220
M CR
Sbjct: 332 MVCR 335
>sp|Q6NW85|ARI1L_DANRE E3 ubiquitin-protein ligase arih1l OS=Danio rerio GN=arih1l PE=2
SV=1
Length = 533
Score = 50.8 bits (120), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 73/184 (39%), Gaps = 10/184 (5%)
Query: 41 CDICIEPMSVNNKFKNNNLCTHPFCQDCTVKYIEVKVRDNNTAK-IECPGLHCEQFLDPF 99
C IC ++ N + C H FC C Y+ K+ + + I CP +C+ +D
Sbjct: 162 CQICY--LNYPNSYFTGLECGHKFCMQCWGDYLTTKIIEEGMGQTISCPAHNCDILVDDN 219
Query: 100 ACKHTIPSSLFLKWCDHLCEDYVLGFER--SYCPNRNCMAVMVNECEGIGRVKKAQCPKC 157
I S HL + + R +CP +C V+ + K +C KC
Sbjct: 220 TVMRLITDSKVKLKYQHLITNSFVECNRLLKWCPAPDCHHVVKVQ---YPDAKPVRC-KC 275
Query: 158 KQWFCFQCKLAWHAGYRCEESGN-LRDRNDIAFGKLLEKMNWTRCPGCGNCIERKKGCRI 216
+ FCF C WH +C+ ++ +D + N CP C IE+ GC
Sbjct: 276 GRQFCFNCGENWHDPVKCKWLRKWIKKCDDDSETSNWIAANTKECPKCHVTIEKDGGCNH 335
Query: 217 MFCR 220
M CR
Sbjct: 336 MVCR 339
>sp|Q32NS4|ARI1_XENLA E3 ubiquitin-protein ligase arih1 OS=Xenopus laevis GN=arih1 PE=2
SV=1
Length = 529
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 72/184 (39%), Gaps = 10/184 (5%)
Query: 41 CDICIEPMSVNNKFKNNNLCTHPFCQDCTVKYIEVKVRDNNTAK-IECPGLHCEQFLDPF 99
C IC ++ N + C H FC C +Y+ K+ + + I CP C+ +D
Sbjct: 158 CQICY--LNYPNSYFTGLECGHKFCMQCWGEYLTTKIIEEGMGQTISCPAHGCDILVDDN 215
Query: 100 ACKHTIPSSLFLKWCDHLCEDYVLGFER--SYCPNRNCMAVMVNECEGIGRVKKAQCPKC 157
I S HL + + R +CP +C V+ + K C KC
Sbjct: 216 TVMRLITDSKVKLKYQHLITNSFVECNRLLKWCPAPDCHHVVKVQ---YPDAKPVHC-KC 271
Query: 158 KQWFCFQCKLAWHAGYRCEESGN-LRDRNDIAFGKLLEKMNWTRCPGCGNCIERKKGCRI 216
+ FCF C WH +C+ ++ +D + N CP C IE+ GC
Sbjct: 272 GRQFCFNCGENWHDPVKCKWLRKWIKKCDDDSETSNWIAANTKECPKCHVTIEKDGGCNH 331
Query: 217 MFCR 220
M CR
Sbjct: 332 MVCR 335
>sp|Q6PFJ9|ARI1_DANRE E3 ubiquitin-protein ligase arih1 OS=Danio rerio GN=arih1 PE=2 SV=1
Length = 527
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 72/184 (39%), Gaps = 10/184 (5%)
Query: 41 CDICIEPMSVNNKFKNNNLCTHPFCQDCTVKYIEVKVRDNNTAK-IECPGLHCEQFLDPF 99
C IC ++ N + C H FC C Y+ K+ + + I CP C+ +D
Sbjct: 156 CQICY--LNYPNSYFTGLECGHKFCMQCWGDYLTTKIIEEGMGQTISCPAHSCDILVDDN 213
Query: 100 ACKHTIPSSLFLKWCDHLCEDYVLGFER--SYCPNRNCMAVMVNECEGIGRVKKAQCPKC 157
I S HL + + R +CP +C V+ + K +C KC
Sbjct: 214 TVMRLITDSKVKLKYQHLITNSFVECNRLLKWCPAPDCHHVVKVQ---YPDAKPVRC-KC 269
Query: 158 KQWFCFQCKLAWHAGYRCEESGN-LRDRNDIAFGKLLEKMNWTRCPGCGNCIERKKGCRI 216
+ FCF C WH +C+ ++ +D + N CP C IE+ GC
Sbjct: 270 GRQFCFNCGENWHDPVKCKWLRKWIKKCDDDSETSNWIAANTKECPKCHVTIEKDGGCNH 329
Query: 217 MFCR 220
M CR
Sbjct: 330 MVCR 333
>sp|Q6T486|RBRA_DICDI Probable E3 ubiquitin-protein ligase rbrA OS=Dictyostelium
discoideum GN=rbrA PE=3 SV=1
Length = 520
Score = 48.9 bits (115), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 80/190 (42%), Gaps = 11/190 (5%)
Query: 37 GTFTCDICIEPMSVNNKFKNNNLCTHPFCQDCTVKYIEVKVRDNNT-AKIECPGLHCEQF 95
G +C IC+E F +C H +C C Y+E+KV + CP C+
Sbjct: 135 GNVSCLICLEDYPPTQTFAL--ICNHRYCLPCYKNYLEIKVSEGPECIYTPCPAPKCKVI 192
Query: 96 LDPFACKHTIPSSLFLKWCDHLCEDYVLGFER-SYCPNRNCMAVMVNECEGIGRVKKAQC 154
+ A K + +F ++ + + + YV + +CP C+ + C+ R + C
Sbjct: 193 VHQDAFKQIVSPEVFERFNNFILKSYVDDNPQVKWCPAPGCIYSI--RCDRKERKEAVNC 250
Query: 155 PKCKQWFCFQC---KLAWHAGYRCEESGN-LRDRNDIAFGKLLEKMNWTRCPGCGNCIER 210
KC +CF C ++ H C + L+ +D + N +CP C + IE+
Sbjct: 251 -KCGFQYCFNCNDYEIGDHMPCPCSQVDKWLQKASDESENVTWMLANTKKCPECRSPIEK 309
Query: 211 KKGCRIMFCR 220
GC M CR
Sbjct: 310 NGGCMHMTCR 319
>sp|Q8L829|ARI5_ARATH Probable E3 ubiquitin-protein ligase ARI5 OS=Arabidopsis thaliana
GN=ARI5 PE=2 SV=1
Length = 552
Score = 48.9 bits (115), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 73/210 (34%), Gaps = 30/210 (14%)
Query: 39 FTCDICIEPMSVNNKFKNNNLCTHPFCQDCTVKYIEVKVRDNNT------AKIECPGLHC 92
FTC IC + ++ + C HPFC C YI + D CP
Sbjct: 130 FTCGICFDSYTLEEIVSVS--CGHPFCATCWTGYISTTINDGPGCLMLKCPDPSCPAAIG 187
Query: 93 EQFLDPFACKHTIPSSLFLKWCDHLCEDYV-LGFERSYCPNRNCMAVMVNECEGIGRVKK 151
+D A K K+ + YV + E +CP C + + G
Sbjct: 188 RDMIDKLASKEDKE-----KYYRYFLRSYVEVNREMKWCPAPGCEHAI--DFAGGTESYD 240
Query: 152 AQCPKCKQWFCFQCKLAWHAGYRCEESGNLRDRNDIAFGKLLEKMNWT-----RCPGCGN 206
C C FC+ C H C+ G +N E MNW CP C
Sbjct: 241 VSC-LCSHSFCWNCTEEAHRPVDCDTVGKWILKNSAE----SENMNWILANSKPCPKCKR 295
Query: 207 CIERKKGCRIMF----CRFIFLSLCLCIFS 232
IE+ GC M C+F F LCL ++
Sbjct: 296 PIEKNHGCMHMTCTPPCKFEFCWLCLNAWT 325
>sp|Q8W468|ARI8_ARATH Probable E3 ubiquitin-protein ligase ARI8 OS=Arabidopsis thaliana
GN=ARI8 PE=2 SV=1
Length = 567
Score = 48.9 bits (115), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 77/209 (36%), Gaps = 20/209 (9%)
Query: 35 IDGTFTCDICIEPMSVNNKFKNNNLCTHPFCQDCTVKYIEVKVRDNNT-AKIECPGLHCE 93
DG C IC E +++K + C HPFC C YI + D + CP C
Sbjct: 122 TDGELDCGICFETF-LSDKL-HAAACGHPFCDSCWEGYITTAINDGPGCLTLRCPDPSCR 179
Query: 94 QFLDPFACKHTIPSSLFLKWCDHLCEDYVLGFERS-YCPNRNCMAVMVNECEGIGRVKKA 152
+ P K+ + YV ++ +CP C VN G G
Sbjct: 180 AAVGQDMINLLAPDKDKQKYTSYFVRSYVEDNRKTKWCPAPGC-DYAVNFVVGSGNY-DV 237
Query: 153 QCPKCKQWFCFQCKLAWHAGYRCEESGNLRDRNDIAFGKLLEKMNWT-----RCPGCGNC 207
C +C FC+ C H C+ +N E MNW CP C
Sbjct: 238 NC-RCCYSFCWNCAEEAHRPVDCDTVSKWVLKNSAE----SENMNWILANSKPCPKCKRP 292
Query: 208 IERKKGCRIMF----CRFIFLSLCLCIFS 232
IE+ +GC + C+F F LCL ++
Sbjct: 293 IEKNQGCMHITCTPPCKFEFCWLCLGAWT 321
>sp|Q9SKC4|ARI10_ARATH Probable E3 ubiquitin-protein ligase ARI10 OS=Arabidopsis thaliana
GN=ARI10 PE=2 SV=1
Length = 514
Score = 48.1 bits (113), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 77/200 (38%), Gaps = 14/200 (7%)
Query: 27 IKEEELEDIDGT---FTCDICIEPMSVNNKFKNNNLCTHPFCQDCTVKYIEVKVRDNNT- 82
I +E + D++GT C IC E S K + C HP+C+ C YI K+ D
Sbjct: 104 ILKEPVVDVNGTEVDIQCGICFE--SYTRKEIASVSCGHPYCKTCWTGYITTKIEDGPGC 161
Query: 83 AKIECPGLHCEQFLDPFACKHTIPSSLFLKWCDHLCEDYVL-GFERSYCPNRNCM-AVMV 140
+++CP C + K+ + YV G + +CP+ C AV
Sbjct: 162 LRVKCPEPSCYAVVGQDMIDEVTEKKDKDKYYRYFLRSYVEDGKKMKWCPSPGCECAVEF 221
Query: 141 NECEGIGRVKKAQCPKCKQWFCFQCKLAWHAGYRCEESGNLRDRN-DIAFGKLLEKMNWT 199
E G C C FC+ C H+ CE +N D + K N
Sbjct: 222 GESSGY----DVACL-CSYRFCWNCSEDAHSPVDCETVSKWIFKNQDESENKNWILANSK 276
Query: 200 RCPGCGNCIERKKGCRIMFC 219
CP C IE+ GC M C
Sbjct: 277 PCPKCKRPIEKSHGCNHMTC 296
>sp|Q9LVW9|ARI4_ARATH Putative E3 ubiquitin-protein ligase ARI4 OS=Arabidopsis thaliana
GN=ARI4 PE=5 SV=2
Length = 529
Score = 48.1 bits (113), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 74/199 (37%), Gaps = 34/199 (17%)
Query: 38 TFTCDICIEPMSVNNKFKNNNLCTHPFCQDCTVKYIEVKVRDNNTAKIECPGLHCEQFLD 97
T CDIC+E ++ C H FC DC ++ V++ + +I C C D
Sbjct: 116 TMKCDICMEE-DLSKYAMTRMECGHRFCNDCWKEHFTVRINEGEGKRIRCMAYKCNTICD 174
Query: 98 PFACKHTIPSSLFLKWCDHLCEDYVLGFER-SYCPNRNCMAVMVNECEGIGRVKKAQCPK 156
+ + + L K+ L E YV +CP+ + + G V + +C
Sbjct: 175 E--ARQLVSTELAEKFDRFLIESYVEDNNMVKWCPSTPHCGNAIRNIKDDGDVDEVECS- 231
Query: 157 CKQWFCFQCKLAWHA----------GYRCEESGNLRDRNDIAFGKLLEKMNWTR-----C 201
C FCF C H+ +CE+ E +NW C
Sbjct: 232 CGLQFCFSCLSESHSPCSCLMWKLWKKKCEDES--------------ETVNWMTVNTKLC 277
Query: 202 PGCGNCIERKKGCRIMFCR 220
P C I+++ GC M C+
Sbjct: 278 PKCSKPIQKRDGCNHMTCK 296
>sp|Q9NV58|RN19A_HUMAN E3 ubiquitin-protein ligase RNF19A OS=Homo sapiens GN=RNF19A PE=1
SV=3
Length = 838
Score = 46.2 bits (108), Expect = 2e-04, Method: Composition-based stats.
Identities = 35/152 (23%), Positives = 66/152 (43%), Gaps = 22/152 (14%)
Query: 41 CDICIEPMSVNNKFKNNNLCTHPFCQDCTVKYIEVKVRDNNTAKIECPGLHCEQFLDPFA 100
C +C+ S ++F + C H C DC +Y+ +++ ++ I CP C + +P
Sbjct: 132 CPLCLLRHS-KDRFPDIMTCHHRSCVDCLRQYLRIEISESRV-NISCP--ECTERFNPHD 187
Query: 101 CKHTIPSSLFL-KWCDHLCEDYVLGF-ERSYCPNRNC-MAVMVNECEGIGRVKKAQCPK- 156
+ + + + K+ + + +++ + +CP +C AV+ C A CPK
Sbjct: 188 IRLILSDDVLMEKYEEFMLRRWLVADPDCRWCPAPDCGYAVIAFGC--------ASCPKL 239
Query: 157 ------CKQWFCFQCKLAWHAGYRCEESGNLR 182
C FC+ CK WH C+ + R
Sbjct: 240 TCGREGCGTEFCYHCKQIWHPNQTCDAARQER 271
>sp|Q54CX4|Y5521_DICDI Uncharacterized protein DDB_G0292642 OS=Dictyostelium discoideum
GN=DDB_G0292642 PE=4 SV=2
Length = 903
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 86/219 (39%), Gaps = 21/219 (9%)
Query: 18 EKENLRQEEIKEEELED-------IDGTFTCDICIEPMSVNNKFKNNNLCTHPFCQDCTV 70
EK+ LRQ ++E+ED ++ C IC +N+ C H +C DC
Sbjct: 586 EKKVLRQYIKLKKEMEDRKKVSTKLEEPVECKICYMEYDQSNEVFTLE-CDHVYCFDCIT 644
Query: 71 KYIEVKVRDNNTAKIECPGLHCEQFLDPFACKHTIPSSLFLKWCDHLCEDYVLGFERSYC 130
+++ + + + I CP C++ + +LK+ + +C
Sbjct: 645 EHLRILITEGRVLDISCPHPQCKKEIKESEIYMLTNEKNWLKYQKFSMIASLKTEPIKWC 704
Query: 131 PNRNCMAVMVNECEGIGRVKKAQCPKCKQWFCFQCKLAWHAGYRC-EESGNLRDRND--- 186
P +C + G R CPKC FC+ C H G +C E+ L+ R +
Sbjct: 705 PTPDCDTPVRG---GSERNPILNCPKCSNDFCWICGEYSHEGAKCGTEAMELQGRKNKSI 761
Query: 187 ----IAFGKLLE--KMNWTRCPGCGNCIERKKGCRIMFC 219
A+ LE K CP C + IE+ GC M C
Sbjct: 762 ESAATAYIDFLESNKHFVKPCPTCKSHIEKHDGCNHMTC 800
>sp|Q9SKC2|ARI11_ARATH Probable E3 ubiquitin-protein ligase ARI11 OS=Arabidopsis thaliana
GN=ARI11 PE=2 SV=1
Length = 542
Score = 45.8 bits (107), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 84/223 (37%), Gaps = 26/223 (11%)
Query: 27 IKEEELEDIDGT---FTCDICIEPMSVNNKFKNNNLCTHPFCQDCTVKYIEVKVRDNNT- 82
I +E + D++GT C IC E S K C HP+C+ C YI K+ D
Sbjct: 122 ILKEPVVDVNGTEVDIQCGICFE--SYTRKEIARVSCGHPYCKTCWTGYITTKIEDGPGC 179
Query: 83 AKIECPGLHCEQFLDPFACKHTIPSSLFLKWCDHLCEDYVL-GFERSYCPNRNCMAVMVN 141
+++CP C + K+ + YV G + +CP+ C +
Sbjct: 180 LRVKCPEPSCYAVVGQDMIDEVTEKKDKDKYYRYFLRSYVEDGKKMKWCPSPGCEYAVEF 239
Query: 142 ECEGIGRVKKAQCPKCKQWFCFQCKLAWHAGYRCEESGN--LRDRNDIAFGKLLEKMNWT 199
G C C FC+ C H+ CE L+++++ E MNW
Sbjct: 240 GVNGSSSY-DVSCL-CSYKFCWNCCEDAHSPVDCETVSKWLLKNKDE------SENMNWI 291
Query: 200 R-----CPGCGNCIERKKGCRIMF----CRFIFLSLCLCIFSN 233
CP C IE+ GC M CR F CL S+
Sbjct: 292 LAKTKPCPKCKRPIEKNTGCNHMSCSAPCRHYFCWACLQPLSD 334
>sp|P50636|RN19A_MOUSE E3 ubiquitin-protein ligase RNF19A OS=Mus musculus GN=Rnf19a PE=1
SV=2
Length = 840
Score = 45.8 bits (107), Expect = 3e-04, Method: Composition-based stats.
Identities = 35/152 (23%), Positives = 66/152 (43%), Gaps = 22/152 (14%)
Query: 41 CDICIEPMSVNNKFKNNNLCTHPFCQDCTVKYIEVKVRDNNTAKIECPGLHCEQFLDPFA 100
C +C+ S ++F + C H C DC +Y+ +++ ++ I CP C + +P
Sbjct: 132 CPLCLLRHS-KDRFPDIMTCHHRSCVDCLRQYLRIEISESRV-NISCP--ECTERFNPHD 187
Query: 101 CKHTIPSSLFL-KWCDHLCEDYVLGF-ERSYCPNRNC-MAVMVNECEGIGRVKKAQCPK- 156
+ + + + K+ + + +++ + +CP +C AV+ C A CPK
Sbjct: 188 IRLILSDDVLMEKYEEFMLRRWLVADPDCRWCPAPDCGYAVIAFGC--------ASCPKL 239
Query: 157 ------CKQWFCFQCKLAWHAGYRCEESGNLR 182
C FC+ CK WH C+ + R
Sbjct: 240 TCGREGCGTEFCYHCKQIWHPNQTCDAARQER 271
>sp|Q2VJ60|RN19A_PIG E3 ubiquitin-protein ligase RNF19A OS=Sus scrofa GN=RNF19A PE=2
SV=1
Length = 838
Score = 45.4 bits (106), Expect = 3e-04, Method: Composition-based stats.
Identities = 35/152 (23%), Positives = 65/152 (42%), Gaps = 22/152 (14%)
Query: 41 CDICIEPMSVNNKFKNNNLCTHPFCQDCTVKYIEVKVRDNNTAKIECPGLHCEQFLDPFA 100
C +C+ S ++F C H C DC +Y+ +++ ++ I CP C + +P
Sbjct: 132 CPLCLLRHS-KDRFPEIMTCHHRSCVDCLRQYLRIEISESRV-NISCP--ECTERFNPHD 187
Query: 101 CKHTIPSSLFL-KWCDHLCEDYVLGF-ERSYCPNRNC-MAVMVNECEGIGRVKKAQCPK- 156
+ + + + K+ + + +++ + +CP +C AV+ C A CPK
Sbjct: 188 IRLILSDDVLMEKYEEFMLRRWLVADPDCRWCPAPDCGYAVIAFGC--------ASCPKL 239
Query: 157 ------CKQWFCFQCKLAWHAGYRCEESGNLR 182
C FC+ CK WH C+ + R
Sbjct: 240 TCGREGCGTEFCYHCKQIWHPNQTCDAARQER 271
>sp|D3YYI7|RN217_MOUSE Probable E3 ubiquitin-protein ligase RNF217 OS=Mus musculus
GN=Rnf217 PE=3 SV=2
Length = 515
Score = 45.4 bits (106), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 79/197 (40%), Gaps = 30/197 (15%)
Query: 38 TFTCDICIEPMSVNNKFKNNNLCTHPFCQDCTVKYIEVKVRDNNTAKIECPGLHCEQFLD 97
C +C+E + K C C++C Y+ +V+ +I+CP C +FL+
Sbjct: 233 VLMCRVCLE----DKPIKPLPCCKKAVCEECLKIYLSSQVQLGQV-EIKCPVTECFEFLE 287
Query: 98 PFACKHTIPSSLFLKWCDHLCEDYVLGFER---SYCPNRNCMAVMVNECEGIGRVK---- 150
+ + +K+ Y L R S P C + +G
Sbjct: 288 ETTVVYNLTHEDSIKY------KYFLELGRIDSSTKPCPQCKHFTTFKKKGHIPTPSRSE 341
Query: 151 ---KAQCPKCKQWFCFQCKLAWHAGYRCEE--SGNLRDR---NDIAFGKLLEKMNWTRCP 202
K QCP C+ +CF+C WH G C+E G+ R ++I G + N +CP
Sbjct: 342 SRYKIQCPTCQLIWCFKCHSPWHEGVNCKEYKKGDKLLRHWASEIEHG----QRNAQKCP 397
Query: 203 GCGNCIERKKGCRIMFC 219
C I+R +GC M C
Sbjct: 398 KCKIHIQRTEGCDHMTC 414
>sp|Q22431|ARI2_CAEEL Probable protein ariadne-2 OS=Caenorhabditis elegans GN=T12E12.1
PE=3 SV=2
Length = 482
Score = 44.7 bits (104), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 68/165 (41%), Gaps = 9/165 (5%)
Query: 60 CTHPFCQDCTVKYIEVKVRDNNTAKIECPGLHCEQFLDPFACKHTIPSS--LFLKWCDHL 117
C H FC+ C ++E ++ + ++IEC CE + I +S + LK+ L
Sbjct: 145 CGHCFCEHCWKSHVESRLSEGVASRIECMESECEVYAPSEFVLSIIKNSPVIKLKYERFL 204
Query: 118 CEDYVLGFER-SYCPNRNCMAVMVNECEGIGRVKKAQCPKCKQWFCFQCKLAWHAGYRCE 176
D V +C C V++ E + K+ C +C FC +C +HA CE
Sbjct: 205 LRDMVNSHPHLKFCVGNEC-PVIIRSTE--VKPKRVTCMQCHTSFCVKCGADYHAPTSCE 261
Query: 177 ESGNLRDR--NDIAFGKLLEKMNWTRCPGCGNCIERKKGCRIMFC 219
+ +D + CP C +CIE+ GC + C
Sbjct: 262 TIKQWMTKCADDSETANYISAHT-KDCPQCHSCIEKAGGCNHIQC 305
>sp|A2A7Q9|RN19B_MOUSE E3 ubiquitin-protein ligase RNF19B OS=Mus musculus GN=Rnf19b PE=1
SV=2
Length = 732
Score = 44.7 bits (104), Expect = 6e-04, Method: Composition-based stats.
Identities = 34/133 (25%), Positives = 57/133 (42%), Gaps = 21/133 (15%)
Query: 60 CTHPFCQDCTVKYIEVKVRDNNTAKIECPGLHCEQFLDPFACKHTIPSS-LFLKWCDHLC 118
C H C+DC Y+ +++ ++ I CP C + L+P + + L K+ + +
Sbjct: 134 CPHRSCRDCLRHYLRLEISESRVP-ISCP--ECSERLNPHDIRLLLADPPLMHKYEEFML 190
Query: 119 EDYVLGF-ERSYCPNRNC-MAVMVNECEGIGRVKKAQCPK-------CKQWFCFQCKLAW 169
Y+ + +CP +C AV+ C A CPK C+ FC+ CK W
Sbjct: 191 RRYLASDPDCRWCPAPDCGYAVIAYGC--------ASCPKLTCEREGCQTEFCYHCKQIW 242
Query: 170 HAGYRCEESGNLR 182
H C+ + R
Sbjct: 243 HPNQTCDMARQQR 255
>sp|Q9SKC3|ARI9_ARATH Probable E3 ubiquitin-protein ligase ARI9 OS=Arabidopsis thaliana
GN=ARI9 PE=2 SV=1
Length = 543
Score = 44.3 bits (103), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 70/182 (38%), Gaps = 7/182 (3%)
Query: 41 CDICIEPMSVNNKFKNNNLCTHPFCQDCTVKYIEVKVRDNNT-AKIECPGLHCEQFLDPF 99
C IC E + + + C HP+C+ C YI K+ D +++CP C +
Sbjct: 128 CGICFESYTREEIARVS--CGHPYCKTCWAGYITTKIEDGPGCLRVKCPEPSCSAAVGKD 185
Query: 100 ACKHTIPSSLFLKWCDHLCEDYVL-GFERSYCPNRNCMAVMVNECEGIGRVKKAQCPKCK 158
+ + + K+ ++ YV G + +CP+ C + E G C
Sbjct: 186 MIEDVTETKVNEKYSRYILRSYVEDGKKIKWCPSPGCGYAV--EFGGSESSSYDVSCLCS 243
Query: 159 QWFCFQCKLAWHAGYRCEESGNLRDRN-DIAFGKLLEKMNWTRCPGCGNCIERKKGCRIM 217
FC+ C H+ C+ +N D + K N CP C IE+ GC M
Sbjct: 244 YRFCWNCSEDAHSPVDCDTVSKWIFKNQDESENKNWMLANSKPCPECKRPIEKNDGCNHM 303
Query: 218 FC 219
C
Sbjct: 304 TC 305
>sp|Q6ZMZ0|RN19B_HUMAN E3 ubiquitin-protein ligase RNF19B OS=Homo sapiens GN=RNF19B PE=1
SV=2
Length = 732
Score = 44.3 bits (103), Expect = 8e-04, Method: Composition-based stats.
Identities = 34/133 (25%), Positives = 57/133 (42%), Gaps = 21/133 (15%)
Query: 60 CTHPFCQDCTVKYIEVKVRDNNTAKIECPGLHCEQFLDPFACKHTIPSS-LFLKWCDHLC 118
C H C+DC Y+ +++ ++ I CP C + L+P + + L K+ + +
Sbjct: 137 CPHRSCRDCLRHYLRLEISESRVP-ISCP--ECSERLNPHDIRLLLADPPLMHKYEEFML 193
Query: 119 EDYVLGF-ERSYCPNRNC-MAVMVNECEGIGRVKKAQCPK-------CKQWFCFQCKLAW 169
Y+ + +CP +C AV+ C A CPK C+ FC+ CK W
Sbjct: 194 RRYLASDPDCRWCPAPDCGYAVIAYGC--------ASCPKLTCEREGCQTEFCYHCKQIW 245
Query: 170 HAGYRCEESGNLR 182
H C+ + R
Sbjct: 246 HPNQTCDMARQQR 258
>sp|P0CE10|Y4102_ARATH Putative uncharacterized protein At4g01020, chloroplastic
OS=Arabidopsis thaliana GN=At4g01020 PE=4 SV=1
Length = 1787
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 84/217 (38%), Gaps = 23/217 (10%)
Query: 16 RQEKENLRQEEIKE-----EELEDIDGTFTCDICIEPMSVNNKFKNNNLCTHPFCQDCTV 70
RQE + + E +E E+ ++I+ C IC+ + + C+H FC+ C +
Sbjct: 1533 RQEVQKMVNELAREKSALGEKPDEIE--LECPICLSEVDDGYSLEG---CSHLFCKACLL 1587
Query: 71 KYIEVKVRDNNTAKIECPGLHCEQFLDPFACKHTIPSSLFLKWCDHLCEDYVLGFERSYC 130
+ E +R+ + I C + C P + + L + D L + F S
Sbjct: 1588 EQFEASMRNFDAFPILCSHIDCGA---PIVVA-DMRALLSQEKLDELISASLSAFVTS-- 1641
Query: 131 PNRNCMAVMVNECEGIGRVKKAQ-------CPKCKQWFCFQCKLAWHAGYRCEESGNLRD 183
+ +C I RV Q C C C +C L +H CE ++
Sbjct: 1642 SDGKLRFCSTPDCPSIYRVAGPQESGEPFICGACHSETCTRCHLEYHPLITCERYKKFKE 1701
Query: 184 RNDIAFGKLLEKMNWTRCPGCGNCIERKKGCRIMFCR 220
D++ + + CP C + IE+ GC + CR
Sbjct: 1702 NPDLSLKDWAKGKDVKECPICKSTIEKTDGCNHLQCR 1738
>sp|Q9WUB0|HOIL1_MOUSE RanBP-type and C3HC4-type zinc finger-containing protein 1 OS=Mus
musculus GN=Rbck1 PE=1 SV=2
Length = 508
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 79/188 (42%), Gaps = 34/188 (18%)
Query: 60 CTHPFCQDCTVKYIEVKVRDNNTAKIECPGLHCEQFLDPFACKHTIPSSLFLKWCDHLC- 118
C H FC++C ++ +R++ A++ CP F+D ++ P L + L
Sbjct: 298 CLHTFCREC----LQGTIRNSQEAEVACP------FID---STYSCPGKLLEREIRALLS 344
Query: 119 -EDY--VLGFERSYCPNRNCMAVM--VNECEGI----GRVKKAQCPKCKQWFCFQCKLAW 169
EDY L S NR+ ++ +C G V + CP C + C CK A
Sbjct: 345 PEDYQRFLDLGVSIAENRSTLSYHCKTPDCRGWCFFEDDVNEFTCPVCTRVNCLLCK-AI 403
Query: 170 HAGYRCEESGN---LRDRNDIAFGK-------LLEKMNWTRCPGCGNCIERKKGCRIMFC 219
H C E + LR +ND+A + +L++ CP C +++K GC + C
Sbjct: 404 HEHMNCREYQDDLALRAQNDVAARQTTEMLKVMLQQGEAMHCPQCRIVVQKKDGCDWIRC 463
Query: 220 RFIFLSLC 227
+C
Sbjct: 464 TVCHTEIC 471
>sp|Q04638|ITT1_YEAST Translation termination inhibitor protein ITT1 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=ITT1 PE=1
SV=1
Length = 464
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 96/274 (35%), Gaps = 69/274 (25%)
Query: 12 RECPRQEKENLRQEEIKEEELEDID-GTFTCDICIEPMSVNNKFK---NNNLCTHPFCQD 67
R+C Q++ +L ++ +E L+ + + C IC+E K N H C+
Sbjct: 150 RKCLTQDQYDLFKQISEEATLQKVSRSNYHCCICMEMEKGVRMIKLPCENANVEHYLCRG 209
Query: 68 CTVKYIEVKVRDNNTAKIECPGLHCEQF-LDPFACKH---------TIPSSLFLKWCD-H 116
C Y +++N + + CP ++ L+ F IP S + D
Sbjct: 210 CAKSYFTAMIQENRISSVRCPQCEYKELKLEDFKSYKKMLKALFTPLIPVSFLKEVIDTE 269
Query: 117 LCEDYVLGFE-------RSYCPN-----RNCMAVMVNECEGIGRVKKAQCPKCKQWFCFQ 164
LCE Y F YCP R C + E + QC KC FCF
Sbjct: 270 LCERYEKMFYNQAATRLSKYCPYACVTCRRCDSWCTKEDLDDAMI---QCQKCHFVFCFD 326
Query: 165 CKLAWHA-----GYRCEESGNL-------------RDR---------------NDIAFGK 191
C AWH G + S ++ R R ND K
Sbjct: 327 CLHAWHGYNNKCGKKVSLSTDIIEEYLDDTVTSYERKRKLEAKYGRRVLELEVNDYLAEK 386
Query: 192 LL------EKMNWTRCPGCGNCIERKKGCRIMFC 219
+L E N RCP C +ER +GC M C
Sbjct: 387 MLDLAIKKEGSNLQRCPKCKVVVERSEGCNKMKC 420
>sp|Q96EP0|RNF31_HUMAN E3 ubiquitin-protein ligase RNF31 OS=Homo sapiens GN=RNF31 PE=1
SV=1
Length = 1072
Score = 42.0 bits (97), Expect = 0.003, Method: Composition-based stats.
Identities = 29/92 (31%), Positives = 39/92 (42%), Gaps = 11/92 (11%)
Query: 151 KAQCPKCKQWFCFQCKLAW---HAGYRCEESGNLRDRNDIAFG----KLLEKMNWTRCPG 203
+A CP+C Q FC +CK W H G CE+ N + ND + + + N CP
Sbjct: 814 EATCPQCHQTFCVRCKRQWEEQHRGRSCEDFQNWKRMNDPEYQAQGLAMYLQENGIDCPK 873
Query: 204 CGNCIERKKGCRIMF----CRFIFLSLCLCIF 231
C +G + F CR F S C F
Sbjct: 874 CKFSYALARGGCMHFHCTQCRHQFCSGCYNAF 905
>sp|Q924T7|RNF31_MOUSE E3 ubiquitin-protein ligase RNF31 OS=Mus musculus GN=Rnf31 PE=1
SV=2
Length = 1066
Score = 42.0 bits (97), Expect = 0.004, Method: Composition-based stats.
Identities = 29/92 (31%), Positives = 39/92 (42%), Gaps = 11/92 (11%)
Query: 151 KAQCPKCKQWFCFQCKLAW---HAGYRCEESGNLRDRNDIAFG----KLLEKMNWTRCPG 203
+A CP+C Q FC +CK W H G CE+ N + ND + + + N CP
Sbjct: 808 EATCPQCHQTFCVRCKRQWEEQHRGRSCEDFQNWKRTNDPEYQAQGLAMYLQENGIDCPK 867
Query: 204 CGNCIERKKGCRIMF----CRFIFLSLCLCIF 231
C +G + F CR F S C F
Sbjct: 868 CKFSYALARGGCMHFHCTQCRHQFCSGCYNAF 899
>sp|Q8TC41|RN217_HUMAN Probable E3 ubiquitin-protein ligase RNF217 OS=Homo sapiens
GN=RNF217 PE=2 SV=3
Length = 275
Score = 41.6 bits (96), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 38/74 (51%), Gaps = 9/74 (12%)
Query: 151 KAQCPKCKQWFCFQCKLAWHAGYRCEE--SGNLRDRN---DIAFGKLLEKMNWTRCPGCG 205
K QCP C+ +CF+C WH G C+E G+ R+ +I G + N +CP C
Sbjct: 80 KIQCPTCQFVWCFKCHSPWHEGVNCKEYKKGDKLLRHWASEIEHG----QRNAQKCPKCK 135
Query: 206 NCIERKKGCRIMFC 219
I+R +GC M C
Sbjct: 136 IHIQRTEGCDHMTC 149
>sp|P58283|RN216_MOUSE E3 ubiquitin-protein ligase RNF216 OS=Mus musculus GN=Rnf216 PE=1
SV=3
Length = 853
Score = 41.2 bits (95), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 79/171 (46%), Gaps = 20/171 (11%)
Query: 61 THPFCQDCTVKYIEVKVRDNNTAKIECPGLHCEQFLDPFACKHTIPSSLFLKWCDHLCED 120
H FC++C ++Y + V + +++ C C + +P ++ K+ + E+
Sbjct: 521 AHLFCKECLIRYAQEAVFGSGKSELSCMEGSCTCSFPTSELEKVLPQTILYKYYERKAEE 580
Query: 121 YVLGFERSY---CPNRNCMAVMVNECEGIGRVKKAQC--PKCKQWFCFQCKLAW--HAGY 173
V CP+ + A++ ++ VK+ C P+C++ C +C+ W H G
Sbjct: 581 EVAAAYADELVRCPSCSFPALLDSD------VKRFSCPNPRCRKETCRKCQGLWKEHNGL 634
Query: 174 RCEESGNLRDRNDIAF-GKLLEKMNWTR---CPGCGNCIERKKGCRIMFCR 220
CEE L +++DI + + EKM R C CG + + +GC M CR
Sbjct: 635 TCEE---LAEKDDIKYRTSIEEKMTAARIRKCHKCGTGLIKSEGCNRMSCR 682
>sp|Q62921|HOIL1_RAT RanBP-type and C3HC4-type zinc finger-containing protein 1
OS=Rattus norvegicus GN=Rbck1 PE=1 SV=3
Length = 508
Score = 40.8 bits (94), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 78/188 (41%), Gaps = 34/188 (18%)
Query: 60 CTHPFCQDCTVKYIEVKVRDNNTAKIECPGLHCEQFLDPFACKHTIPSSLFLKWCDHLC- 118
C H FC++C ++ +R++ A++ CP F+D ++ P L + L
Sbjct: 298 CLHTFCREC----LQGTIRNSQEAEVSCP------FID---NTYSCPGKLLEREIRALLS 344
Query: 119 -EDY--VLGFERSYCPNRNCMAVM--VNECEGI----GRVKKAQCPKCKQWFCFQCKLAW 169
EDY L S NR+ ++ +C G V + CP C + C CK A
Sbjct: 345 PEDYQRFLDLGVSIAENRSTLSYHCKTPDCRGWCFFEDDVNEFTCPVCTRVNCLLCK-AI 403
Query: 170 HAGYRCEESGN---LRDRNDIAFGK-------LLEKMNWTRCPGCGNCIERKKGCRIMFC 219
H C E + R RND+A + +L++ CP C +++K GC + C
Sbjct: 404 HERMNCREYQDDLAHRARNDVAAQQTTEMLRVMLQQGEAMYCPQCRIVVQKKDGCDWIRC 463
Query: 220 RFIFLSLC 227
+C
Sbjct: 464 TVCHTEIC 471
>sp|Q94981|ARI1_DROME Protein ariadne-1 OS=Drosophila melanogaster GN=ari-1 PE=1 SV=2
Length = 503
Score = 40.8 bits (94), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 67/166 (40%), Gaps = 10/166 (6%)
Query: 60 CTHPFCQDCTVKYIEVKVRDNNTAK-IECPGLHCEQFLDPFACKHTIPSS-LFLKWCDHL 117
C H FC C +Y+ K+ + I C C+ +D + + + + +K+ +
Sbjct: 150 CGHRFCMPCWHEYLSTKIVAEGLGQTISCAAHGCDILVDDVTVANLVTDARVRVKYQQLI 209
Query: 118 CEDYVLGFER-SYCPNRNCM-AVMVNECEGIGRVKKAQCPKCKQWFCFQCKLAWHAGYRC 175
+V + +CP+ +C AV V E ++ C KC FCF C WH +C
Sbjct: 210 TNSFVECNQLLRWCPSVDCTYAVKVPYAEP----RRVHC-KCGHVFCFACGENWHDPVKC 264
Query: 176 EESGNLRDR-NDIAFGKLLEKMNWTRCPGCGNCIERKKGCRIMFCR 220
+ +D + N CP C IE+ GC M C+
Sbjct: 265 RWLKKWIKKCDDDSETSNWIAANTKECPRCSVTIEKDGGCNHMVCK 310
>sp|Q9FFN9|ARI13_ARATH Probable E3 ubiquitin-protein ligase ARI13 OS=Arabidopsis thaliana
GN=ARI13 PE=2 SV=1
Length = 536
Score = 40.0 bits (92), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 35/168 (20%), Positives = 67/168 (39%), Gaps = 13/168 (7%)
Query: 33 EDIDGTFTCDICIEPMSVNNKFKNNNLCTHPFCQDCTVKYIE--VKVRDNNTAKIECPGL 90
+D+ +C IC + + + C+H FC+ C KY+E + + +I CP
Sbjct: 79 QDLYKISSCGICFKTCDDGDYLISTPFCSHMFCKSCWRKYLEKNFYLVEKTQTRISCPHG 138
Query: 91 HCEQFLDPFACKHTIPSSLFLKWCDHLCEDYVLG---FERSYCPNRNCMAVMVNECEGIG 147
C+ + P + + + +++ Y+ G E YCP ++C V+ +
Sbjct: 139 ACQAAVGPDTIQKLTVCDQEM-YVEYILRSYIEGNKVLEIKYCPAQDCNYVIEFHQKNHD 197
Query: 148 RVKKAQCP-----KCKQWFCFQCKLAWHAGYRCEESGN--LRDRNDIA 188
+ C FC++C L H C + + RD N ++
Sbjct: 198 GADQEDYGFNVVCLCGHIFCWRCMLESHKPVTCNNASDWLFRDLNSLS 245
>sp|Q9BYM8|HOIL1_HUMAN RanBP-type and C3HC4-type zinc finger-containing protein 1 OS=Homo
sapiens GN=RBCK1 PE=1 SV=2
Length = 510
Score = 39.7 bits (91), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 79/189 (41%), Gaps = 36/189 (19%)
Query: 60 CTHPFCQDCTVKYIEVKVRDNNTAKIECPGLHCEQFLD-PFACKHTIPSSLFLKWCDHLC 118
C H FC++C ++ +R++ A++ CP F+D ++C L + L
Sbjct: 300 CLHTFCREC----LQGTIRNSQEAEVSCP------FIDNTYSCS----GKLLEREIKALL 345
Query: 119 --EDY--VLGFERSYCPNRNCMAVM--VNECEGI----GRVKKAQCPKCKQWFCFQCKLA 168
EDY L S NR+ + +C+G V + CP C C CK A
Sbjct: 346 TPEDYQRFLDLGISIAENRSAFSYHCKTPDCKGWCFFEDDVNEFTCPVCFHVNCLLCK-A 404
Query: 169 WHAGYRC---EESGNLRDRNDIAFGK-------LLEKMNWTRCPGCGNCIERKKGCRIMF 218
H C +E LR +ND+A + +L++ RCP C +++K GC +
Sbjct: 405 IHEQMNCKEYQEDLALRAQNDVAARQTTEMLKVMLQQGEAMRCPQCQIVVQKKDGCDWIR 464
Query: 219 CRFIFLSLC 227
C +C
Sbjct: 465 CTVCHTEIC 473
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.327 0.141 0.489
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 95,228,412
Number of Sequences: 539616
Number of extensions: 4144860
Number of successful extensions: 18084
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 95
Number of HSP's that attempted gapping in prelim test: 17857
Number of HSP's gapped (non-prelim): 197
length of query: 237
length of database: 191,569,459
effective HSP length: 114
effective length of query: 123
effective length of database: 130,053,235
effective search space: 15996547905
effective search space used: 15996547905
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 59 (27.3 bits)