Query 026544
Match_columns 237
No_of_seqs 113 out of 522
Neff 5.8
Searched_HMMs 29240
Date Mon Mar 25 16:07:53 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026544.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/026544hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3iqu_A 14-3-3 protein sigma; s 100.0 3.7E-84 1.3E-88 569.4 18.2 207 2-209 5-211 (236)
2 3uzd_A 14-3-3 protein gamma; s 100.0 3E-83 1E-87 566.9 19.5 207 1-209 1-209 (248)
3 3ubw_A 14-3-3E, 14-3-3 protein 100.0 6.3E-83 2.2E-87 567.5 20.1 205 4-209 30-234 (261)
4 2br9_A 14-3-3E, 14-3-3 protein 100.0 2.5E-81 8.6E-86 551.5 20.0 205 4-209 4-208 (234)
5 1o9d_A 14-3-3-like protein C; 100.0 1.1E-80 3.9E-85 554.2 20.6 207 2-209 5-213 (260)
6 2npm_A 14-3-3 domain containin 100.0 5.4E-80 1.9E-84 549.6 20.2 205 3-209 26-233 (260)
7 3efz_A 14-3-3 protein; 14-3-3, 100.0 2.6E-79 8.8E-84 545.7 12.7 202 3-209 27-235 (268)
8 2o8p_A 14-3-3 domain containin 100.0 1.2E-77 4E-82 524.7 18.5 190 4-204 2-198 (227)
9 3edt_B KLC 2, kinesin light ch 93.3 2.4 8.2E-05 33.5 14.3 56 147-204 144-199 (283)
10 3nf1_A KLC 1, kinesin light ch 91.9 4.2 0.00014 32.8 18.6 183 6-204 28-225 (311)
11 3vtx_A MAMA; tetratricopeptide 90.7 4.3 0.00015 30.7 14.8 57 7-65 7-63 (184)
12 2qfc_A PLCR protein; TPR, HTH, 88.3 9.9 0.00034 31.5 13.0 76 115-204 150-226 (293)
13 3n71_A Histone lysine methyltr 86.3 2.4 8.1E-05 39.9 8.5 98 92-204 326-423 (490)
14 4b4t_Q 26S proteasome regulato 85.3 17 0.00058 31.2 14.8 178 8-204 58-246 (434)
15 3qwp_A SET and MYND domain-con 85.2 1.5 5.2E-05 40.4 6.5 56 147-204 346-401 (429)
16 4g1t_A Interferon-induced prot 83.0 23 0.00077 30.8 15.6 50 147-202 351-400 (472)
17 3ulq_A Response regulator aspa 82.8 6.3 0.00022 33.8 9.1 73 118-204 101-173 (383)
18 3qww_A SET and MYND domain-con 82.4 2.6 9E-05 39.0 6.8 57 147-205 315-371 (433)
19 3hym_B Cell division cycle pro 82.3 18 0.00062 29.2 12.0 46 147-202 253-298 (330)
20 4a1s_A PINS, partner of inscut 81.7 23 0.00079 30.0 20.7 190 6-205 49-254 (411)
21 3qww_A SET and MYND domain-con 81.4 2.6 9E-05 39.0 6.5 98 92-204 315-412 (433)
22 3ro2_A PINS homolog, G-protein 80.6 20 0.00068 28.6 15.4 54 147-204 200-253 (338)
23 3edt_B KLC 2, kinesin light ch 80.5 2.6 8.8E-05 33.3 5.3 56 147-204 102-157 (283)
24 3u4t_A TPR repeat-containing p 80.0 20 0.00069 28.3 14.5 53 148-202 197-249 (272)
25 3ro3_A PINS homolog, G-protein 79.9 13 0.00045 26.1 12.0 148 8-204 12-159 (164)
26 3lf9_A 4E10_D0_1IS1A_001_C (T1 79.8 5.9 0.0002 31.0 6.9 86 19-109 11-103 (121)
27 4i17_A Hypothetical protein; T 79.7 20 0.00068 27.9 12.4 59 6-65 8-66 (228)
28 3n71_A Histone lysine methyltr 79.3 3.5 0.00012 38.8 6.6 56 147-204 326-381 (490)
29 2xpi_A Anaphase-promoting comp 79.0 36 0.0012 30.5 15.3 46 147-202 533-578 (597)
30 3qwp_A SET and MYND domain-con 75.1 3.2 0.00011 38.1 5.0 57 147-205 304-360 (429)
31 3u3w_A Transcriptional activat 74.8 34 0.0012 28.1 15.8 75 118-205 153-227 (293)
32 3sf4_A G-protein-signaling mod 72.8 40 0.0014 28.0 17.2 54 147-204 204-257 (406)
33 1fch_A Peroxisomal targeting s 72.5 39 0.0013 27.8 12.2 55 8-64 101-155 (368)
34 3q15_A PSP28, response regulat 72.4 11 0.00038 32.3 7.6 75 117-205 98-172 (378)
35 3ro2_A PINS homolog, G-protein 68.3 43 0.0015 26.5 20.8 188 6-204 6-213 (338)
36 3sf4_A G-protein-signaling mod 67.2 53 0.0018 27.2 21.2 188 7-204 11-217 (406)
37 3qky_A Outer membrane assembly 67.2 46 0.0016 26.5 14.1 63 5-68 15-79 (261)
38 3ieg_A DNAJ homolog subfamily 67.1 49 0.0017 26.7 14.4 46 147-202 289-334 (359)
39 2gw1_A Mitochondrial precursor 66.9 62 0.0021 27.9 13.2 56 146-203 205-266 (514)
40 3hym_B Cell division cycle pro 65.8 50 0.0017 26.4 13.5 55 147-203 210-265 (330)
41 4abn_A Tetratricopeptide repea 65.6 77 0.0026 28.5 14.6 50 146-202 237-286 (474)
42 2y4t_A DNAJ homolog subfamily 65.5 63 0.0022 27.5 15.2 56 9-66 147-202 (450)
43 4gcn_A Protein STI-1; structur 65.4 15 0.0005 26.7 6.0 46 147-202 25-70 (127)
44 3ulq_A Response regulator aspa 65.4 62 0.0021 27.4 17.0 174 11-204 109-294 (383)
45 3u3w_A Transcriptional activat 64.8 29 0.001 28.5 8.4 91 100-204 93-185 (293)
46 3ro3_A PINS homolog, G-protein 63.8 32 0.0011 24.0 7.5 53 147-204 66-119 (164)
47 2y4t_A DNAJ homolog subfamily 63.4 70 0.0024 27.2 13.1 58 8-67 180-237 (450)
48 3cv0_A Peroxisome targeting si 62.9 57 0.0019 26.0 14.3 58 6-65 22-79 (327)
49 4a1s_A PINS, partner of inscut 62.2 70 0.0024 26.9 17.1 178 8-205 89-294 (411)
50 2xpi_A Anaphase-promoting comp 59.1 98 0.0033 27.5 16.4 55 146-203 491-545 (597)
51 3fp2_A TPR repeat-containing p 59.1 91 0.0031 27.2 15.7 49 146-204 444-492 (537)
52 3ieg_A DNAJ homolog subfamily 58.8 70 0.0024 25.7 17.4 167 9-203 124-301 (359)
53 3fp2_A TPR repeat-containing p 58.6 92 0.0032 27.1 16.3 55 148-203 213-272 (537)
54 3bee_A Putative YFRE protein; 58.0 12 0.00042 26.6 4.2 31 7-37 45-75 (93)
55 3rkv_A Putative peptidylprolyl 57.7 14 0.00047 27.5 4.7 55 147-203 28-92 (162)
56 3gw4_A Uncharacterized protein 57.1 34 0.0012 25.5 6.9 75 117-204 63-137 (203)
57 1fch_A Peroxisomal targeting s 55.2 86 0.0029 25.7 15.6 58 6-65 65-122 (368)
58 4gfq_A Ribosome-recycling fact 54.7 19 0.00065 30.6 5.4 69 36-109 127-199 (209)
59 4gyw_A UDP-N-acetylglucosamine 53.6 1.6E+02 0.0054 28.8 12.6 168 6-209 10-180 (723)
60 2gw1_A Mitochondrial precursor 52.1 1.1E+02 0.0039 26.2 13.7 171 8-203 307-478 (514)
61 4eqf_A PEX5-related protein; a 51.6 1E+02 0.0035 25.5 16.0 58 6-65 66-123 (365)
62 1elr_A TPR2A-domain of HOP; HO 51.6 35 0.0012 23.0 5.7 53 147-202 55-107 (131)
63 4gcn_A Protein STI-1; structur 51.1 35 0.0012 24.6 5.9 52 147-202 59-111 (127)
64 1ge9_A Ribosome recycling fact 51.0 35 0.0012 28.2 6.4 70 36-109 105-174 (184)
65 3ma5_A Tetratricopeptide repea 50.2 57 0.002 22.2 9.9 56 7-64 9-64 (100)
66 4gco_A Protein STI-1; structur 49.9 38 0.0013 24.4 6.0 46 147-202 30-75 (126)
67 3uq3_A Heat shock protein STI1 49.0 86 0.003 23.9 12.1 30 8-37 41-70 (258)
68 4g1t_A Interferon-induced prot 48.5 30 0.001 29.9 6.0 53 147-201 68-121 (472)
69 4ga2_A E3 SUMO-protein ligase 48.4 39 0.0013 25.0 5.9 30 8-37 34-63 (150)
70 1dd5_A Ribosome recycling fact 47.5 30 0.001 28.7 5.5 69 36-109 103-175 (185)
71 2kat_A Uncharacterized protein 47.1 66 0.0022 22.0 11.3 57 7-65 21-77 (115)
72 1lyp_A CAP18; lipopolysacchari 46.9 42 0.0014 19.7 4.6 27 81-107 4-30 (32)
73 1ise_A Ribosome recycling fact 46.5 26 0.0009 29.1 4.9 69 36-109 103-175 (185)
74 2q7f_A YRRB protein; TPR, prot 46.4 94 0.0032 23.6 15.2 57 7-65 59-115 (243)
75 1is1_A Ribosome recycling fact 46.3 26 0.0009 29.0 4.9 69 36-109 103-175 (185)
76 2ho1_A Type 4 fimbrial biogene 46.3 99 0.0034 23.8 11.8 57 7-65 39-95 (252)
77 2pl2_A Hypothetical conserved 46.0 1E+02 0.0036 24.0 10.8 44 6-50 6-49 (217)
78 2ho1_A Type 4 fimbrial biogene 45.9 1E+02 0.0034 23.8 12.8 59 7-67 73-131 (252)
79 1wqg_A Ribosome recycling fact 45.6 28 0.00094 28.9 4.9 69 36-109 103-175 (185)
80 1eh1_A Ribosome recycling fact 45.2 32 0.0011 28.5 5.3 73 36-109 104-176 (185)
81 3k9i_A BH0479 protein; putativ 45.1 49 0.0017 23.0 5.7 56 7-64 29-84 (117)
82 4gco_A Protein STI-1; structur 43.8 43 0.0015 24.2 5.4 58 7-66 49-106 (126)
83 3qky_A Outer membrane assembly 41.9 1.3E+02 0.0043 23.8 10.2 59 9-67 152-221 (261)
84 1xi4_A Clathrin heavy chain; a 41.6 78 0.0027 34.5 8.6 25 176-201 1283-1307(1630)
85 1ya0_A SMG-7 transcript varian 41.5 28 0.00095 32.9 4.9 52 121-184 150-210 (497)
86 2l6j_A TPR repeat-containing p 40.4 61 0.0021 21.4 5.4 46 147-202 21-66 (111)
87 1elr_A TPR2A-domain of HOP; HO 39.5 67 0.0023 21.5 5.6 39 8-48 82-120 (131)
88 1qqe_A Vesicular transport pro 39.3 77 0.0026 26.1 6.9 54 147-204 54-107 (292)
89 2dba_A Smooth muscle cell asso 38.9 57 0.0019 22.7 5.3 48 148-202 46-93 (148)
90 2q7f_A YRRB protein; TPR, prot 38.6 1.3E+02 0.0043 22.8 9.9 58 7-66 25-82 (243)
91 2qfc_A PLCR protein; TPR, HTH, 38.4 80 0.0027 25.8 6.8 175 6-201 76-264 (293)
92 3k9i_A BH0479 protein; putativ 38.3 91 0.0031 21.5 6.3 47 147-203 44-90 (117)
93 2vq2_A PILW, putative fimbrial 37.9 1.2E+02 0.0041 22.4 13.7 57 7-65 10-66 (225)
94 3rkv_A Putative peptidylprolyl 37.9 51 0.0017 24.2 5.1 56 8-65 66-121 (162)
95 2xcb_A PCRH, regulatory protei 37.9 1.1E+02 0.0037 21.9 9.9 29 8-36 21-49 (142)
96 3sz7_A HSC70 cochaperone (SGT) 37.6 1.2E+02 0.004 22.1 10.8 29 8-36 14-42 (164)
97 1hxi_A PEX5, peroxisome target 36.3 82 0.0028 22.3 5.9 58 6-65 18-75 (121)
98 2vyi_A SGTA protein; chaperone 35.9 94 0.0032 20.6 5.9 59 7-67 48-106 (131)
99 1na3_A Designed protein CTPR2; 35.4 62 0.0021 20.5 4.7 58 7-66 11-68 (91)
100 1na3_A Designed protein CTPR2; 35.3 84 0.0029 19.8 6.0 47 147-203 26-72 (91)
101 2kck_A TPR repeat; tetratricop 35.2 90 0.0031 20.1 8.0 28 9-36 10-37 (112)
102 2r5s_A Uncharacterized protein 34.1 73 0.0025 23.8 5.5 32 7-38 110-141 (176)
103 2kc7_A BFR218_protein; tetratr 34.1 78 0.0027 20.7 5.1 30 8-37 3-32 (99)
104 2wh5_A Acyl-COA-binding domain 33.9 59 0.002 24.4 4.7 47 19-65 10-73 (106)
105 2kc7_A BFR218_protein; tetratr 33.7 62 0.0021 21.3 4.5 33 7-39 37-69 (99)
106 2l6j_A TPR repeat-containing p 33.5 56 0.0019 21.6 4.3 31 6-36 5-35 (111)
107 3gyz_A Chaperone protein IPGC; 33.1 1.6E+02 0.0053 22.2 9.1 44 6-50 37-80 (151)
108 1xnf_A Lipoprotein NLPI; TPR, 32.5 1.7E+02 0.0058 22.5 13.7 55 8-64 46-100 (275)
109 2kck_A TPR repeat; tetratricop 32.4 39 0.0013 22.1 3.3 31 7-37 42-72 (112)
110 4eqf_A PEX5-related protein; a 31.8 2.1E+02 0.0073 23.4 16.6 57 7-65 101-157 (365)
111 1hxi_A PEX5, peroxisome target 31.2 97 0.0033 21.9 5.5 26 11-36 57-82 (121)
112 1elw_A TPR1-domain of HOP; HOP 31.2 1.1E+02 0.0037 19.9 5.7 58 6-65 5-62 (118)
113 3uq3_A Heat shock protein STI1 30.5 1.8E+02 0.006 22.0 15.9 57 6-65 6-62 (258)
114 3cv0_A Peroxisome targeting si 30.5 2E+02 0.0068 22.7 11.9 55 8-64 58-112 (327)
115 3caz_A BAR protein; thermo-aci 29.7 2.6E+02 0.0088 23.7 9.0 111 10-161 99-209 (294)
116 3nf1_A KLC 1, kinesin light ch 29.7 2E+02 0.0069 22.4 18.5 180 8-203 72-307 (311)
117 2r17_C Vacuolar protein sortin 29.5 30 0.001 30.8 2.8 39 147-187 212-253 (298)
118 2lni_A Stress-induced-phosphop 29.1 1.2E+02 0.0041 20.3 5.6 33 5-37 16-48 (133)
119 2ifu_A Gamma-SNAP; membrane fu 28.5 2.4E+02 0.0084 23.1 12.6 51 147-201 172-222 (307)
120 3ma5_A Tetratricopeptide repea 27.7 1.4E+02 0.0048 20.1 6.4 48 147-204 24-71 (100)
121 3q15_A PSP28, response regulat 27.7 2.7E+02 0.0092 23.3 17.7 175 9-204 105-291 (378)
122 2hr2_A Hypothetical protein; a 27.5 1.6E+02 0.0054 23.3 6.6 53 147-202 28-85 (159)
123 2fbn_A 70 kDa peptidylprolyl i 26.8 1.3E+02 0.0045 22.6 5.9 58 7-66 90-147 (198)
124 3sz7_A HSC70 cochaperone (SGT) 26.7 1.4E+02 0.0049 21.6 5.9 27 10-36 50-76 (164)
125 2e2e_A Formate-dependent nitri 26.2 1.9E+02 0.0065 21.0 11.5 19 18-36 23-41 (177)
126 2dba_A Smooth muscle cell asso 25.3 1.1E+02 0.0036 21.1 4.7 59 7-67 67-125 (148)
127 2vgx_A Chaperone SYCD; alterna 25.2 1.6E+02 0.0053 21.6 5.9 32 6-37 22-53 (148)
128 2vgx_A Chaperone SYCD; alterna 25.0 78 0.0027 23.3 4.1 56 8-65 58-113 (148)
129 1tdp_A Carnobacteriocin B2 imm 25.0 2E+02 0.0069 21.9 6.3 66 44-127 10-82 (111)
130 3gw4_A Uncharacterized protein 25.0 2E+02 0.007 20.9 15.3 73 118-204 105-177 (203)
131 3vtx_A MAMA; tetratricopeptide 25.0 78 0.0027 23.3 4.1 30 8-37 110-139 (184)
132 2w2u_A Hypothetical P60 katani 24.8 84 0.0029 22.3 4.0 27 7-33 21-47 (83)
133 2kat_A Uncharacterized protein 24.2 1.7E+02 0.0057 19.7 6.2 47 147-203 36-82 (115)
134 1na0_A Designed protein CTPR3; 23.5 1.3E+02 0.0043 19.7 4.7 60 7-68 45-104 (125)
135 1qqe_A Vesicular transport pro 23.5 2.1E+02 0.0071 23.3 6.9 54 147-204 94-148 (292)
136 2efl_A Formin-binding protein 23.4 1.9E+02 0.0067 24.0 6.8 12 54-65 71-82 (305)
137 2lbb_A Acyl COA binding protei 23.3 1.3E+02 0.0045 22.1 4.9 35 18-54 11-45 (96)
138 4a5x_A MITD1, MIT domain-conta 23.2 1.6E+02 0.0056 20.9 5.3 27 7-33 18-44 (86)
139 1ihg_A Cyclophilin 40; ppiase 23.1 68 0.0023 28.1 3.9 54 147-202 240-301 (370)
140 2pl2_A Hypothetical conserved 22.9 2.6E+02 0.009 21.5 16.9 44 7-51 41-84 (217)
141 3iyk_A VP5; icosahedral virus; 22.7 3.1E+02 0.01 26.2 8.3 74 18-91 120-199 (526)
142 2xcb_A PCRH, regulatory protei 22.6 1E+02 0.0035 22.0 4.3 9 149-157 105-113 (142)
143 2ifu_A Gamma-SNAP; membrane fu 22.1 3.2E+02 0.011 22.3 9.1 53 147-203 53-105 (307)
144 2lni_A Stress-induced-phosphop 22.0 1.5E+02 0.0052 19.8 4.9 59 7-67 52-110 (133)
145 3onj_A T-snare VTI1; helix, HA 21.9 2.3E+02 0.0078 20.4 8.3 76 21-97 10-88 (97)
146 1hz4_A MALT regulatory protein 21.7 1.7E+02 0.0059 24.2 6.1 53 147-204 31-83 (373)
147 3urz_A Uncharacterized protein 21.2 96 0.0033 24.0 4.1 26 11-36 60-85 (208)
148 2v6y_A AAA family ATPase, P60 21.2 1.1E+02 0.0038 21.5 4.0 27 7-33 13-39 (83)
149 1hh8_A P67PHOX, NCF-2, neutrop 20.8 2.3E+02 0.0078 21.0 6.2 46 147-202 54-99 (213)
150 2vyi_A SGTA protein; chaperone 20.5 1.2E+02 0.0042 20.0 4.1 31 6-36 13-43 (131)
151 1kt0_A FKBP51, 51 kDa FK506-bi 20.5 2.1E+02 0.0072 25.5 6.8 49 147-202 285-345 (457)
152 1a17_A Serine/threonine protei 20.4 2.3E+02 0.0077 19.8 6.8 59 7-67 49-107 (166)
153 1hbk_A ACBP, acyl-COA binding 20.2 2.4E+02 0.0082 20.1 5.8 35 19-54 4-38 (89)
No 1
>3iqu_A 14-3-3 protein sigma; signal transuction, nucleus, phosphoprotein, secreted, prote binding, signaling protein; HET: SEP; 1.05A {Homo sapiens} SCOP: a.118.7.1 PDB: 3iqj_A* 3iqv_A* 3mhr_A* 3lw1_A* 3o8i_A* 3p1n_A* 3p1o_A* 3t0l_A* 3t0m_A* 3u9x_A* 3ux0_A* 4dat_A* 4dau_A* 3p1s_A* 3p1r_A* 3smk_A* 3spr_A* 3p1q_A* 3p1p_A* 3sml_A* ...
Probab=100.00 E-value=3.7e-84 Score=569.38 Aligned_cols=207 Identities=49% Similarity=0.798 Sum_probs=202.6
Q ss_pred cchHhhHHHHHHHHHHhcCHHHHHHHHHHHhhcCCCCCHHHHHHHHhhhhhhccchhhHHHHHHhHhhhhhhhCchhHHH
Q 026544 2 EKEREHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVK 81 (237)
Q Consensus 2 ~~~reel~~~AklaeqaeRy~Dm~~~mK~vi~~~~eLt~EERnLLSvAyKn~i~~~R~s~R~l~sieqk~e~~~~~~~~~ 81 (237)
+++|++++|+|||||||||||||+++||++++.+++||.||||||||||||+||++|+|||+|+++||+++.+|++.+++
T Consensus 5 ~~~re~~v~~AklaeqaeRyddM~~~mk~v~~~~~eLs~EERnLLSvaYKNvig~rR~swRiissieqke~~~~~~~~~~ 84 (236)
T 3iqu_A 5 SMERASLIQKAKLAEQAERYEDMAAFMKGAVEKGEELSCEERNLLSVAYKNVVGGQRAAWRVLSSIEQKSNEEGSEEKGP 84 (236)
T ss_dssp TSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTCCCCCS
T ss_pred cccHHHHHHHHHHHHHhccHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHhhcCCHHHHH
Confidence 35799999999999999999999999999999999999999999999999999999999999999999998888888899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCChhHHHHHHHhcCcccchhhccCcchHHHHHHHHHHHHHHHHHHHh
Q 026544 82 RIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKAYEAATAAAA 161 (237)
Q Consensus 82 ~i~~yk~kIe~EL~~iC~eii~lID~~Lip~~~~~eskVFy~KmKGDyyRYlaE~~~~~~~~~~~~~A~~aY~~A~~iA~ 161 (237)
.+++||++|++||..+|++|+++||++|||+++++|++|||+|||||||||+|||..|++|++++++|++||++|+++|+
T Consensus 85 ~i~~yr~kie~EL~~iC~dil~lld~~Lip~a~~~eskVFY~KmKGDyyRYlAE~~~g~~r~~~~e~a~~aY~~A~~iA~ 164 (236)
T 3iqu_A 85 EVREYREKVETELQGVCDTVLGLLDSHLIKEAGDAESRVFYLKMKGDYYRYLAEVATGDDKKRIIDSARSAYQEAMDISK 164 (236)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHCCSHHHHHHHHHHHHHHHHHHHHHCCSTTHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCccCCchHHHHHHHHhhhhHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCchhHHHHHHHHHHHHHHhcCccHHHHHHHHHhHHHHHHhhh
Q 026544 162 SELPPTHPIRLGLALNFSVFYYEILNSPERLTCIFLFLSRQTLIVVIK 209 (237)
Q Consensus 162 ~~L~pt~PirLGLaLN~SVF~yEIl~~~~~~A~~iA~~~~~~~i~~~~ 209 (237)
++||||||||||||||||||||||+|+|++ ||.+|++||+++|++|.
T Consensus 165 ~~L~pthPirLGLaLNfSVFyyEiln~~~~-Ac~lAk~Afd~Ai~eld 211 (236)
T 3iqu_A 165 KEMPPTNPIRLGLALNFSVFHYEIANSPEE-AISLAKTTFDEAMADLH 211 (236)
T ss_dssp HHSCTTCHHHHHHHHHHHHHHHHTSSCHHH-HHHHHHHHHHHHHHHGG
T ss_pred hhCCCCCcHHHHHHHHHHHHHHHHcCCHHH-HHHHHHHHHHHHHHHhh
Confidence 899999999999999999999999999999 99999999999999875
No 2
>3uzd_A 14-3-3 protein gamma; structural genomics, SGC, structural genomics consortium, MA alpha, phosphoserine, phosphothreonine; HET: SEP; 1.86A {Homo sapiens} PDB: 4e2e_A 2b05_A* 2c63_A* 2c74_A* 4dnk_A 4gnt_A 2bq0_A 2c23_A 2c1n_A* 2c1j_A* 2btp_A*
Probab=100.00 E-value=3e-83 Score=566.93 Aligned_cols=207 Identities=53% Similarity=0.867 Sum_probs=198.6
Q ss_pred CcchHhhHHHHHHHHHHhcCHHHHHHHHHHHhhcCCCCCHHHHHHHHhhhhhhccchhhHHHHHHhHhhhhhhhCchhHH
Q 026544 1 MEKEREHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNV 80 (237)
Q Consensus 1 m~~~reel~~~AklaeqaeRy~Dm~~~mK~vi~~~~eLt~EERnLLSvAyKn~i~~~R~s~R~l~sieqk~e~~~~~~~~ 80 (237)
|+ +|++++|+|||||||||||||+++||++++.+++||.||||||||||||+||++|+|||+|+++||+++.+|++.++
T Consensus 1 m~-~re~lv~~AklaeqaeRyddM~~~Mk~v~~~~~eLt~EERnLLSvAYKNvig~rR~swRiissieqke~~~~~~~~~ 79 (248)
T 3uzd_A 1 MV-DREQLVQKARLAEQAERYDDMAAAMKNVTELNEPLSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTSADGNEKKI 79 (248)
T ss_dssp -C-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC---CCC-H
T ss_pred CC-cHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHhhcccchHHHHHHHHHHHHhhccCCHHHH
Confidence 55 79999999999999999999999999999999999999999999999999999999999999999999878888899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCC--hhHHHHHHHhcCcccchhhccCcchHHHHHHHHHHHHHHHHH
Q 026544 81 KRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSG--ESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKAYEAATA 158 (237)
Q Consensus 81 ~~i~~yk~kIe~EL~~iC~eii~lID~~Lip~~~~~--eskVFy~KmKGDyyRYlaE~~~~~~~~~~~~~A~~aY~~A~~ 158 (237)
+.+++||++|++||..+|++|+++||++|||+++++ |++|||+|||||||||+|||..|++|++++++|++||++|++
T Consensus 80 ~~i~~yr~kie~EL~~iC~dil~lld~~Lip~a~~~~~eskVFY~KmKGDyyRYlAE~~~g~~r~~~~~~a~~aY~~A~~ 159 (248)
T 3uzd_A 80 EMVRAYREKIEKELEAVCQDVLSLLDNYLIKNCSETQYESKVFYLKMKGDYYRYLAEVATGEKRATVVESSEKAYSEAHE 159 (248)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHhcCCcCCCcchhHHHHHHHhhhhHHHHHHHhcCchHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HHhccCCCCCchhHHHHHHHHHHHHHHhcCccHHHHHHHHHhHHHHHHhhh
Q 026544 159 AAASELPPTHPIRLGLALNFSVFYYEILNSPERLTCIFLFLSRQTLIVVIK 209 (237)
Q Consensus 159 iA~~~L~pt~PirLGLaLN~SVF~yEIl~~~~~~A~~iA~~~~~~~i~~~~ 209 (237)
+|+++||||||||||||||||||||||+|+|++ ||.+|++||+++|++|.
T Consensus 160 iA~~~L~pthPirLGLaLNfSVFyYEIln~~~~-Ac~lAk~Afd~Ai~eld 209 (248)
T 3uzd_A 160 ISKEHMQPTHPIRLGLALNYSVFYYEIQNAPEQ-ACHLAKTAFDDAIAELD 209 (248)
T ss_dssp HHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHH-HHHHHHHHHHHHHHTGG
T ss_pred HHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHH-HHHHHHHHHHHHHHHhh
Confidence 999899999999999999999999999999999 99999999999999875
No 3
>3ubw_A 14-3-3E, 14-3-3 protein epsilon; adapter protein, signaling protein, signaling protein-protei complex; HET: SEP; 1.90A {Homo sapiens}
Probab=100.00 E-value=6.3e-83 Score=567.48 Aligned_cols=205 Identities=70% Similarity=1.062 Sum_probs=202.1
Q ss_pred hHhhHHHHHHHHHHhcCHHHHHHHHHHHhhcCCCCCHHHHHHHHhhhhhhccchhhHHHHHHhHhhhhhhhCchhHHHHH
Q 026544 4 EREHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRI 83 (237)
Q Consensus 4 ~reel~~~AklaeqaeRy~Dm~~~mK~vi~~~~eLt~EERnLLSvAyKn~i~~~R~s~R~l~sieqk~e~~~~~~~~~~i 83 (237)
+|++++|+|||||||||||||+++||++++.+++||.||||||||||||+||++|+|||+|+++|||++.+|++.+++.+
T Consensus 30 ~re~lv~~AKLaeqaeRYddMv~~MK~v~~~~~eLt~EERNLLSvAYKNvIgarR~swRiissieqkee~~g~~~~~~~i 109 (261)
T 3ubw_A 30 DREDLVYQAKLAEQAERYDEMVESMKKVAGMDVELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEENKGGEDKLKMI 109 (261)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCHHHHHHH
T ss_pred hHHHHHHHHHHHHHhccHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHhccCCchhHHHHHhHHHHhhhccccHHHHHHH
Confidence 79999999999999999999999999999999999999999999999999999999999999999999988998899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCChhHHHHHHHhcCcccchhhccCcchHHHHHHHHHHHHHHHHHHHhcc
Q 026544 84 KEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKAYEAATAAAASE 163 (237)
Q Consensus 84 ~~yk~kIe~EL~~iC~eii~lID~~Lip~~~~~eskVFy~KmKGDyyRYlaE~~~~~~~~~~~~~A~~aY~~A~~iA~~~ 163 (237)
++||++|++||..+|++|+++||++|||+++++|++|||+|||||||||+|||..|++|++++++|++||++|+++|+++
T Consensus 110 ~~yr~kIe~EL~~iC~dil~lld~~Lip~a~~~EskVFY~KMKGDYyRYlAE~~~g~~rk~~~e~a~~aY~~A~~iA~~~ 189 (261)
T 3ubw_A 110 REYRQMVETELKLICCDILDVLDKHLIPAANTGESKVFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTE 189 (261)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCSHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccccCCcHHHHHHHHHhhccHHHHHHhhcCchHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCchhHHHHHHHHHHHHHHhcCccHHHHHHHHHhHHHHHHhhh
Q 026544 164 LPPTHPIRLGLALNFSVFYYEILNSPERLTCIFLFLSRQTLIVVIK 209 (237)
Q Consensus 164 L~pt~PirLGLaLN~SVF~yEIl~~~~~~A~~iA~~~~~~~i~~~~ 209 (237)
||||||||||||||||||||||+|+|++ ||.+|++||+++|++|.
T Consensus 190 L~pThPirLGLaLNfSVFyYEIln~p~~-Ac~LAk~AFd~Ai~eLd 234 (261)
T 3ubw_A 190 LPPTHPIRLGLALNFSVFYYEILNSPDR-ACRLAKAAFDDAIAELD 234 (261)
T ss_dssp SCTTCHHHHHHHHHHHHHHHHTSCCHHH-HHHHHHHHHHHHHHTGG
T ss_pred CCCCCcHHHHHHHHHHHHHHHHcCCHHH-HHHHHHHHHHHHHHHhh
Confidence 9999999999999999999999999999 99999999999999875
No 4
>2br9_A 14-3-3E, 14-3-3 protein epsilon; cell regulator protein, 14-3-3, phosphoserine, structural GE consortium, SGC, ywhae; HET: SEP; 1.75A {Homo sapiens} PDB: 3ual_A* 2o98_A* 3m50_A* 3m51_A* 3axy_C*
Probab=100.00 E-value=2.5e-81 Score=551.52 Aligned_cols=205 Identities=70% Similarity=1.062 Sum_probs=201.8
Q ss_pred hHhhHHHHHHHHHHhcCHHHHHHHHHHHhhcCCCCCHHHHHHHHhhhhhhccchhhHHHHHHhHhhhhhhhCchhHHHHH
Q 026544 4 EREHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRI 83 (237)
Q Consensus 4 ~reel~~~AklaeqaeRy~Dm~~~mK~vi~~~~eLt~EERnLLSvAyKn~i~~~R~s~R~l~sieqk~e~~~~~~~~~~i 83 (237)
+|++++|+|||||||||||||+++||++++.+++||.||||||||||||+||++|+|||+|+++||+++.+|++.+++.+
T Consensus 4 ~re~~v~~AklaeqaeRyddm~~~mk~v~~~~~eLt~EERnLLsvayKnvig~rR~swRiissieqk~~~k~~~~~~~~i 83 (234)
T 2br9_A 4 DREDLVYQAKLAEQAERYDEMVESMKKVAGMDVELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEENKGGEDKLKMI 83 (234)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhCHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhccCchHHHHHH
Confidence 69999999999999999999999999999999999999999999999999999999999999999999888888899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCChhHHHHHHHhcCcccchhhccCcchHHHHHHHHHHHHHHHHHHHhcc
Q 026544 84 KEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKAYEAATAAAASE 163 (237)
Q Consensus 84 ~~yk~kIe~EL~~iC~eii~lID~~Lip~~~~~eskVFy~KmKGDyyRYlaE~~~~~~~~~~~~~A~~aY~~A~~iA~~~ 163 (237)
++||++|++||..+|++|+++||++|||.++++|++|||+|||||||||+|||..|++|++++++|++||++|+++|+++
T Consensus 84 ~~yr~kie~EL~~iC~~il~lld~~Lip~a~~~eskVFy~KmKGDyyRYlaE~~~g~~r~~~~e~a~~aY~~A~~iA~~~ 163 (234)
T 2br9_A 84 REYRQMVETELKLICCDILDVLDKHLIPAANTGESKVFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTE 163 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCSHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHhhccCCCchHhHHHHHHHhccHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999889
Q ss_pred CCCCCchhHHHHHHHHHHHHHHhcCccHHHHHHHHHhHHHHHHhhh
Q 026544 164 LPPTHPIRLGLALNFSVFYYEILNSPERLTCIFLFLSRQTLIVVIK 209 (237)
Q Consensus 164 L~pt~PirLGLaLN~SVF~yEIl~~~~~~A~~iA~~~~~~~i~~~~ 209 (237)
||||||+|||||||||||||||+|+|++ ||.+|+++|+++|+++.
T Consensus 164 L~pthPirLgLaLN~SVF~yEil~~~~~-A~~lAk~afd~Ai~eld 208 (234)
T 2br9_A 164 LPPTHPIRLGLALNFSVFYYEILNSPDR-ACRLAKAAFDDAIAELD 208 (234)
T ss_dssp SCTTCHHHHHHHHHHHHHHHHTSCCHHH-HHHHHHHHHHHHHHTGG
T ss_pred CCCCCcHHHHHHHHHHHHHHHHcCCHHH-HHHHHHHHHHHHHHhhh
Confidence 9999999999999999999999999999 99999999999999986
No 5
>1o9d_A 14-3-3-like protein C; protein-binding, fusicoccin, 14-3-3 family, activating drug; HET: TPO; 2.3A {Nicotiana tabacum} SCOP: a.118.7.1 PDB: 1o9c_A* 1o9e_A* 1o9f_A* 3e6y_A*
Probab=100.00 E-value=1.1e-80 Score=554.17 Aligned_cols=207 Identities=64% Similarity=1.004 Sum_probs=202.7
Q ss_pred cchHhhHHHHHHHHHHhcCHHHHHHHHHHHhhcC--CCCCHHHHHHHHhhhhhhccchhhHHHHHHhHhhhhhhhCchhH
Q 026544 2 EKEREHHVYLARLAEQAERYDEMVEAMKKVAKLD--VELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQN 79 (237)
Q Consensus 2 ~~~reel~~~AklaeqaeRy~Dm~~~mK~vi~~~--~eLt~EERnLLSvAyKn~i~~~R~s~R~l~sieqk~e~~~~~~~ 79 (237)
+++|++++|+|||+|||||||||+++||++++.+ ++||.||||||||||||+||++|+|||+|+++||+++.+|++.+
T Consensus 5 ~~~re~~v~~AkLaeqaeRyddm~~~mk~v~~~~~~~eLt~EERnLLSvaYKNvig~rR~swRiissieqke~~k~~~~~ 84 (260)
T 1o9d_A 5 PTAREENVYMAKLAEQAERYEEMVEFMEKVSNSLGSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEEH 84 (260)
T ss_dssp CCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTCSSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCHHH
T ss_pred cccHHHHHHHHHHHHHhcCHHHHHHHHHHHHccCCCCCCCHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHhhccCcHHH
Confidence 3689999999999999999999999999999998 99999999999999999999999999999999999988888889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCChhHHHHHHHhcCcccchhhccCcchHHHHHHHHHHHHHHHHHH
Q 026544 80 VKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKAYEAATAA 159 (237)
Q Consensus 80 ~~~i~~yk~kIe~EL~~iC~eii~lID~~Lip~~~~~eskVFy~KmKGDyyRYlaE~~~~~~~~~~~~~A~~aY~~A~~i 159 (237)
++.+++||++|++||..+|++|+++||++|||.++++|++|||+|||||||||+|||..|++|++++++|++||++|+++
T Consensus 85 ~~~i~~yr~kie~EL~~iC~dil~lld~~Lip~a~~~EskVFY~KMKGDYyRYlaE~~~g~~r~~~~e~a~~aY~~A~~i 164 (260)
T 1o9d_A 85 VNSIREYRSKIENELSKICDGILKLLDAKLIPSAASGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKAAQDI 164 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCSHHHHHHHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCCCCCCchhHHHHHHHhccHHHHHHHhcCchHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhccCCCCCchhHHHHHHHHHHHHHHhcCccHHHHHHHHHhHHHHHHhhh
Q 026544 160 AASELPPTHPIRLGLALNFSVFYYEILNSPERLTCIFLFLSRQTLIVVIK 209 (237)
Q Consensus 160 A~~~L~pt~PirLGLaLN~SVF~yEIl~~~~~~A~~iA~~~~~~~i~~~~ 209 (237)
|+++||||||||||||||||||||||+|+|++ ||.+|+++|+++|++|.
T Consensus 165 A~~~L~pthPirLGLaLNfSVFyYEiln~~~~-Ac~lAk~Afd~Ai~eld 213 (260)
T 1o9d_A 165 ATTELAPTHPIRLGLALNFSVFYYEILNSPDR-ACNLAKQAFDEAIAELD 213 (260)
T ss_dssp HHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHH-HHHHHHHHHHHHHHHHH
T ss_pred HHhcCCCCCcHHHHHHHHHHHHHHHHccCHHH-HHHHHHHHHHHHHHhhh
Confidence 99899999999999999999999999999999 99999999999999876
No 6
>2npm_A 14-3-3 domain containing protein; cell regulator protein 14-3-3, struc genomics, structural genomics consortium, SGC, protein BIND; HET: SEP; 2.52A {Cryptosporidium parvum}
Probab=100.00 E-value=5.4e-80 Score=549.57 Aligned_cols=205 Identities=56% Similarity=0.887 Sum_probs=200.0
Q ss_pred chHhhHHHHHHHHHHhcCHHHHHHHHHHHhhcC---CCCCHHHHHHHHhhhhhhccchhhHHHHHHhHhhhhhhhCchhH
Q 026544 3 KEREHHVYLARLAEQAERYDEMVEAMKKVAKLD---VELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQN 79 (237)
Q Consensus 3 ~~reel~~~AklaeqaeRy~Dm~~~mK~vi~~~---~eLt~EERnLLSvAyKn~i~~~R~s~R~l~sieqk~e~~~~~~~ 79 (237)
.+|++++|+|||+|||||||||+++||++++.+ ++||.||||||||||||+||++|+|||+|+++||+++.+|++.+
T Consensus 26 ~~re~~v~~AkLaeqaeRyddmv~~mk~v~~~~~~~~eLt~EERnLLSvAyKNvIg~rR~swRiissieqke~~k~~~~~ 105 (260)
T 2npm_A 26 NARESNVYMAKLAEQAERYDEMAKYMKDVVEARQESEELTVEERNLLSVAYKNAVGSRRSSWRIISSVEQKEHSRNAEDA 105 (260)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCCC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCHHH
T ss_pred ccHHHHHHHHHHHHHhcCHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHHHhccchHHHHHHHHHHHHhhccCcHHH
Confidence 469999999999999999999999999999998 99999999999999999999999999999999999988888889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCChhHHHHHHHhcCcccchhhccCcchHHHHHHHHHHHHHHHHHH
Q 026544 80 VKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKAYEAATAA 159 (237)
Q Consensus 80 ~~~i~~yk~kIe~EL~~iC~eii~lID~~Lip~~~~~eskVFy~KmKGDyyRYlaE~~~~~~~~~~~~~A~~aY~~A~~i 159 (237)
++.+++||++|++||..+|++|+++||++|||.++++|++|||+|||||||||+|||..|++|++++++|++||++|+++
T Consensus 106 ~~~i~~yr~kie~EL~~iC~dil~lld~~Lip~a~~~EskVFY~KMKGDYyRYlaE~~~g~~r~~~~e~a~~aY~~A~~i 185 (260)
T 2npm_A 106 SKMCGKYRSKVEAELTDICNDILTMLDKHLIPTATSPDSKVFYFKMKGDYHRYISEFSTGDSKQSSAEDALKAYKDATVV 185 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHCCSHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHhhccCCCchHHHHHHHHHhccHHHHHHHhcCchHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhccCCCCCchhHHHHHHHHHHHHHHhcCccHHHHHHHHHhHHHHHHhhh
Q 026544 160 AASELPPTHPIRLGLALNFSVFYYEILNSPERLTCIFLFLSRQTLIVVIK 209 (237)
Q Consensus 160 A~~~L~pt~PirLGLaLN~SVF~yEIl~~~~~~A~~iA~~~~~~~i~~~~ 209 (237)
| ++||||||||||||||||||||||+|+|++ ||.+|+++|+++|++|.
T Consensus 186 A-~~L~pthPirLGLaLNfSVFyYEiln~~~~-Ac~lAk~Afd~Ai~eld 233 (260)
T 2npm_A 186 A-KDLEPTHPIRLGLALNFSVFHYEILNEPRA-AIDMAKEAFEMAIEQLD 233 (260)
T ss_dssp H-TTSCTTCHHHHHHHHHHHHHHHHTSCCHHH-HHHHHHHHHHHHHTTGG
T ss_pred H-HhCCCCCcHHHHHHHHHHHHHHHHcCCHHH-HHHHHHHHHHHHHHhhh
Confidence 9 899999999999999999999999999999 99999999999999986
No 7
>3efz_A 14-3-3 protein; 14-3-3, cell regulation, structural genom structural genomics consortium, SGC; HET: SEP; 2.08A {Cryptosporidium parvum} SCOP: a.118.7.1 PDB: 2ijp_A*
Probab=100.00 E-value=2.6e-79 Score=545.71 Aligned_cols=202 Identities=23% Similarity=0.365 Sum_probs=172.4
Q ss_pred chHhhHHHHHHHHHHhcCHHHHHHHHHHHhhcCCCCCHHHHHHHHhhhhhhccchhhHHHHHHhHhhhh-hhhCc-hhHH
Q 026544 3 KEREHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKE-EAKGN-EQNV 80 (237)
Q Consensus 3 ~~reel~~~AklaeqaeRy~Dm~~~mK~vi~~~~eLt~EERnLLSvAyKn~i~~~R~s~R~l~sieqk~-e~~~~-~~~~ 80 (237)
++|++++|+|||||||||||||+++| ++.+++||.||||||||||||+||++|+|||+|+++|||+ +.+|+ +.++
T Consensus 27 m~r~~lv~~AKLaeqaeRYddMv~~M---~e~~~eLs~EERNLLSvAYKNvIgarR~swRiissieqke~e~kg~~~~~~ 103 (268)
T 3efz_A 27 MKLSEGAYRAKLADMVGNYKDVIKVL---TESSDFRDNSLILLLAGSLRNRVTSIRNSLKSIKSQEEKLRKEKSLNNEFI 103 (268)
T ss_dssp -------------------CHHHHHH---TC-----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
T ss_pred CCHHHHHHHHHHHHHhccHHHHHHHH---HhcCCcCCHHHHHHHHHHHHhhhccchHHHHHHHHHHHHhhhccCChHHHH
Confidence 35999999999999999999999999 7889999999999999999999999999999999999999 77787 8889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCChhHHHHHHHhcCcccchhhccCcchHHHHHHHHHHHHHHHHHHH
Q 026544 81 KRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKAYEAATAAA 160 (237)
Q Consensus 81 ~~i~~yk~kIe~EL~~iC~eii~lID~~Lip~~~~~eskVFy~KmKGDyyRYlaE~~~~~~~~~~~~~A~~aY~~A~~iA 160 (237)
+.+++||++|++||..+|++|+++||++|||.++++ ++|||+|||||||||+|||..|++|++++++|++||++|+++|
T Consensus 104 ~~i~~yr~kie~EL~~iC~diL~llD~~Lip~a~~~-skVFY~KMKGDYyRYlAE~~~g~erk~~~e~a~~aYq~A~eiA 182 (268)
T 3efz_A 104 QVIEDIKRDFEESILLESEDVIRIIDDNLLMYSEEG-ARAFCIKLKGDLMRYKAEILKDEEKNQCIKQAVEFYEDALQRE 182 (268)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTGGGCCHH-HHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCch-hHHHHHhccchHHHHHHhhcCchHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred hccC--CCCCchhHHHHHHHHHHHHHHhcCccHHHHHHHHHhHHH---HHHhhh
Q 026544 161 ASEL--PPTHPIRLGLALNFSVFYYEILNSPERLTCIFLFLSRQT---LIVVIK 209 (237)
Q Consensus 161 ~~~L--~pt~PirLGLaLN~SVF~yEIl~~~~~~A~~iA~~~~~~---~i~~~~ 209 (237)
+++| |||||||||||||||||||||+|+|++ ||.+|++||++ +|++|.
T Consensus 183 ~~~L~~~pThPiRLGLaLNfSVFyYEIln~p~~-Ac~lAk~AFde~~~AIaeld 235 (268)
T 3efz_A 183 RSFLEKYPSDPLYLATILNYTILKYDLLGNPEG-AMKFANRAIQAAENSRSDSE 235 (268)
T ss_dssp HHHCTTGGGCHHHHHHHHHHHHHHHTTTCCHHH-HHHHHHHHHHHHHHTCCC--
T ss_pred HHhcCCCCCChHHHHHHHHHHHHHHHHcCCHHH-HHHHHHHHHhhHHHHHHHhc
Confidence 9899 999999999999999999999999999 99999999999 988875
No 8
>2o8p_A 14-3-3 domain containing protein; signaling protein, 14-3-3, cell regulator protein, cryptospo parvum, structural genomics; HET: MSE; 1.82A {Cryptosporidium parvum} SCOP: a.118.7.1
Probab=100.00 E-value=1.2e-77 Score=524.73 Aligned_cols=190 Identities=23% Similarity=0.250 Sum_probs=184.0
Q ss_pred hHhhHH---HHHHHHHHhcCHHHHHHHHHHHhh----cCCCCCHHHHHHHHhhhhhhccchhhHHHHHHhHhhhhhhhCc
Q 026544 4 EREHHV---YLARLAEQAERYDEMVEAMKKVAK----LDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGN 76 (237)
Q Consensus 4 ~reel~---~~AklaeqaeRy~Dm~~~mK~vi~----~~~eLt~EERnLLSvAyKn~i~~~R~s~R~l~sieqk~e~~~~ 76 (237)
+|++++ |+|||||||||||||+++||++++ .+++||.||||||||||||+||++|+|||+|+++||++ +|+
T Consensus 2 ~re~~v~~~~~AKlaeqaeRyddM~~~mk~v~~~~~~~~~eLt~EERnLLSvAYKNvig~rR~swRiissiEqke--k~~ 79 (227)
T 2o8p_A 2 EMDERLLQKYRAQVFEWGGCFDKMFEALKSLIYLSEFENSEFDDEERHLLTLCIKHKISDYRTMTSQVLQEQTKQ--LNN 79 (227)
T ss_dssp -CCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS--CSC
T ss_pred cHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhhccCCCCCHHHHHHHHHHHHHhhcccHHHHHHHHHHHHHH--cCC
Confidence 589999 999999999999999999999999 89999999999999999999999999999999999998 678
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCChhHHHHHHHhcCcccchhhccCcchHHHHHHHHHHHHHHH
Q 026544 77 EQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKAYEAA 156 (237)
Q Consensus 77 ~~~~~~i~~yk~kIe~EL~~iC~eii~lID~~Lip~~~~~eskVFy~KmKGDyyRYlaE~~~~~~~~~~~~~A~~aY~~A 156 (237)
+.+++.+++||++|++||..+|++|+++||++|||++ |++|||+|||||||||+|||..|+ +++|++||++|
T Consensus 80 ~~~~~~i~~yr~kie~EL~~iC~dil~lld~~Lip~a---EskVFY~KMKGDYyRYlAE~~~g~-----~e~a~~aY~~A 151 (227)
T 2o8p_A 80 DELVKICSEYVFSLRKDIKAFLQSFEDCVDRLVEKSF---FSKFFKLKVKSDISRYKLEFGLCS-----LEDSKKIHQDA 151 (227)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCSH---HHHHHHHHHHHHHHHHHHHTTSSC-----HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhccCcH---HHHHHHHHHhhhHHHHHHHHcccc-----HHHHHHHHHHH
Confidence 8889999999999999999999999999999999998 999999999999999999999998 78999999999
Q ss_pred HHHHhccCCCCCchhHHHHHHHHHHHHHHhcCccHHHHHHHHHhHHHH
Q 026544 157 TAAAASELPPTHPIRLGLALNFSVFYYEILNSPERLTCIFLFLSRQTL 204 (237)
Q Consensus 157 ~~iA~~~L~pt~PirLGLaLN~SVF~yEIl~~~~~~A~~iA~~~~~~~ 204 (237)
+++|+++||||||||||||||||||||||+|+|++ ||.+|++||+.+
T Consensus 152 ~~iA~~~L~pthPirLGLaLNfSVFyYEIln~p~~-Ac~lAk~Afd~~ 198 (227)
T 2o8p_A 152 FTLLCEHPDKIEQLPLGFIQNLAYILSEKYGEKKQ-VFNMLNSLGKIL 198 (227)
T ss_dssp HHHHHHCGGGGGGSCHHHHHHHHHHHHHTSSCHHH-HHHHHHHHHHHH
T ss_pred HHHHHhhCCCCChHHHHHHHHHHHHHHHHccCHHH-HHHHHHHHHHHH
Confidence 99999899999999999999999999999999999 999999999954
No 9
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=93.34 E-value=2.4 Score=33.50 Aligned_cols=56 Identities=14% Similarity=0.062 Sum_probs=46.8
Q ss_pred HHHHHHHHHHHHHHhccCCCCCchhHHHHHHHHHHHHHHhcCccHHHHHHHHHhHHHH
Q 026544 147 DHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERLTCIFLFLSRQTL 204 (237)
Q Consensus 147 ~~A~~aY~~A~~iA~~~L~pt~PirLGLaLN~SVF~yEIl~~~~~~A~~iA~~~~~~~ 204 (237)
+.|...|++|+++.+...++.+|.......|.+..++. +++.++ |....+++++..
T Consensus 144 ~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~-A~~~~~~~l~~~ 199 (283)
T 3edt_B 144 EEVEYYYRRALEIYATRLGPDDPNVAKTKNNLASCYLK-QGKYQD-AETLYKEILTRA 199 (283)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHH-HTCHHH-HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHH-cCCHHH-HHHHHHHHHHHH
Confidence 56999999999998888888899888888888776665 599999 999988888754
No 10
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=91.90 E-value=4.2 Score=32.76 Aligned_cols=183 Identities=13% Similarity=0.069 Sum_probs=99.3
Q ss_pred hhHHHHHHHHHHhcCHHHHHHHHHHHhhc-------CCCCCHHHHHHHHhhhhhhccchhhHHHHHHhHhhh-hhh--hC
Q 026544 6 EHHVYLARLAEQAERYDEMVEAMKKVAKL-------DVELTVEERNLVSVGYKNVIGARRASWRILSSIEQK-EEA--KG 75 (237)
Q Consensus 6 eel~~~AklaeqaeRy~Dm~~~mK~vi~~-------~~eLt~EERnLLSvAyKn~i~~~R~s~R~l~sieqk-~e~--~~ 75 (237)
+-+..+|......|+|++++.+.+++++. +.+....-...+..+|-. .+....|...+...... ... ..
T Consensus 28 ~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~al~~~~~~~~~~ 106 (311)
T 3nf1_A 28 RTLHNLVIQYASQGRYEVAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRD-QNKYKDAANLLNDALAIREKTLGKD 106 (311)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHHHHhCCC
Confidence 34567888888899999999999998864 222223333344444432 33344444444322111 110 00
Q ss_pred chhH----HHHHHHHH-HHHHHHHHHHHHHHHHHhhhccCCCCCCChhHHHHHHHhcCcccchhhccCcchHHHHHHHHH
Q 026544 76 NEQN----VKRIKEYR-QRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSL 150 (237)
Q Consensus 76 ~~~~----~~~i~~yk-~kIe~EL~~iC~eii~lID~~Lip~~~~~eskVFy~KmKGDyyRYlaE~~~~~~~~~~~~~A~ 150 (237)
.... .....-|. ..=-++-...+...+++.....-+. .......+-..|..|... |+ .+.|.
T Consensus 107 ~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~---~~~~~~~~~~la~~~~~~-----~~-----~~~A~ 173 (311)
T 3nf1_A 107 HPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKD---HPDVAKQLNNLALLCQNQ-----GK-----YEEVE 173 (311)
T ss_dssp CHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTT---CHHHHHHHHHHHHHHHTT-----TC-----HHHHH
T ss_pred ChHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhcCCC---ChHHHHHHHHHHHHHHHc-----CC-----HHHHH
Confidence 0100 01111110 0001223334444444443321111 122333344444444322 21 35699
Q ss_pred HHHHHHHHHHhccCCCCCchhHHHHHHHHHHHHHHhcCccHHHHHHHHHhHHHH
Q 026544 151 KAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERLTCIFLFLSRQTL 204 (237)
Q Consensus 151 ~aY~~A~~iA~~~L~pt~PirLGLaLN~SVF~yEIl~~~~~~A~~iA~~~~~~~ 204 (237)
+.|++|++++....++.+|.......+.+..++. +++.++ |....+++++..
T Consensus 174 ~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~-A~~~~~~al~~~ 225 (311)
T 3nf1_A 174 YYYQRALEIYQTKLGPDDPNVAKTKNNLASCYLK-QGKFKQ-AETLYKEILTRA 225 (311)
T ss_dssp HHHHHHHHHHHHTSCTTCHHHHHHHHHHHHHHHH-HTCHHH-HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHH-cCCHHH-HHHHHHHHHHHH
Confidence 9999999999887788888888777777776655 599999 999988888754
No 11
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=90.72 E-value=4.3 Score=30.67 Aligned_cols=57 Identities=23% Similarity=0.220 Sum_probs=39.3
Q ss_pred hHHHHHHHHHHhcCHHHHHHHHHHHhhcCCCCCHHHHHHHHhhhhhhccchhhHHHHHH
Q 026544 7 HHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILS 65 (237)
Q Consensus 7 el~~~AklaeqaeRy~Dm~~~mK~vi~~~~eLt~EERnLLSvAyKn~i~~~R~s~R~l~ 65 (237)
-...++.+..+-|+|++++++.+++++.+|.- .+=...+..+|-. .+....+...+.
T Consensus 7 iy~~lG~~~~~~g~~~~A~~~~~~al~~~p~~-~~~~~~la~~~~~-~~~~~~a~~~~~ 63 (184)
T 3vtx_A 7 IYMDIGDKKRTKGDFDGAIRAYKKVLKADPNN-VETLLKLGKTYMD-IGLPNDAIESLK 63 (184)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC-HHHHHHHHHHHHH-CCCHHHHHHHHH
Confidence 45568888899999999999999999987763 4445555555543 334444444443
No 12
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=88.33 E-value=9.9 Score=31.51 Aligned_cols=76 Identities=8% Similarity=0.040 Sum_probs=50.3
Q ss_pred CChhHHHHHHHhcCcccchhhccCcchHHHHHHHHHHHHHHHHHHHhccCCCCCch-hHHHHHHHHHHHHHHhcCccHHH
Q 026544 115 SGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKAYEAATAAAASELPPTHPI-RLGLALNFSVFYYEILNSPERLT 193 (237)
Q Consensus 115 ~~eskVFy~KmKGDyyRYlaE~~~~~~~~~~~~~A~~aY~~A~~iA~~~L~pt~Pi-rLGLaLN~SVF~yEIl~~~~~~A 193 (237)
++...+..+...|..|... |+ -+.|...|++|+++++. .+ .+|- ......|.+..|+ -+++.++ |
T Consensus 150 ~~~~~~~~~~~lg~~y~~~-----~~-----~~~A~~~~~kal~~~~~-~~-~~~~~~~~~~~nlg~~y~-~~~~y~~-A 215 (293)
T 2qfc_A 150 DVYQNLYIENAIANIYAEN-----GY-----LKKGIDLFEQILKQLEA-LH-DNEEFDVKVRYNHAKALY-LDSRYEE-S 215 (293)
T ss_dssp CTTHHHHHHHHHHHHHHHT-----TC-----HHHHHHHHHHHHHHHHH-SC-CCHHHHHHHHHHHHHHHH-HTTCHHH-H
T ss_pred chHHHHHHHHHHHHHHHHc-----CC-----HHHHHHHHHHHHHHHHh-cC-ccccchHHHHHhHHHHHH-HHhhHHH-H
Confidence 3444455566667776543 11 25699999999999853 33 3332 2245667766555 5699999 9
Q ss_pred HHHHHHhHHHH
Q 026544 194 CIFLFLSRQTL 204 (237)
Q Consensus 194 ~~iA~~~~~~~ 204 (237)
+...+++++-.
T Consensus 216 l~~~~kal~~~ 226 (293)
T 2qfc_A 216 LYQVNKAIEIS 226 (293)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99988888765
No 13
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=86.29 E-value=2.4 Score=39.93 Aligned_cols=98 Identities=8% Similarity=0.054 Sum_probs=67.4
Q ss_pred HHHHHHHHHHHHHhhhccCCCCCCChhHHHHHHHhcCcccchhhccCcchHHHHHHHHHHHHHHHHHHHhccCCCCCchh
Q 026544 92 DELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKAYEAATAAAASELPPTHPIR 171 (237)
Q Consensus 92 ~EL~~iC~eii~lID~~Lip~~~~~eskVFy~KmKGDyyRYlaE~~~~~~~~~~~~~A~~aY~~A~~iA~~~L~pt~Pir 171 (237)
+|-..+|...+++-.+.|=|...+ ..=-+.-.|.-|+.+ | + -+.|...|++|+++-+..++|.||--
T Consensus 326 ~eA~~l~~~aL~~~~~~lg~~Hp~---~a~~~~nLa~~y~~~-----g-~----~~eA~~~~~~aL~i~~~~lG~~Hp~~ 392 (490)
T 3n71_A 326 HEVVKLCRECLEKQEPVFADTNLY---VLRLLSIASEVLSYL-----Q-A----YEEASHYARRMVDGYMKLYHHNNAQL 392 (490)
T ss_dssp HHHHHHHHHHHHHHTTTBCTTSHH---HHHHHHHHHHHHHHT-----T-C----HHHHHHHHHHHHHHHHHHSCTTCHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCCHH---HHHHHHHHHHHHHHh-----c-C----HHHHHHHHHHHHHHHHHHcCCCCHHH
Confidence 355667777777776666444311 111222223333222 1 1 14599999999999989999999999
Q ss_pred HHHHHHHHHHHHHHhcCccHHHHHHHHHhHHHH
Q 026544 172 LGLALNFSVFYYEILNSPERLTCIFLFLSRQTL 204 (237)
Q Consensus 172 LGLaLN~SVF~yEIl~~~~~~A~~iA~~~~~~~ 204 (237)
+....|.++.|+. .++.++ |..+.+.++.-.
T Consensus 393 a~~l~nLa~~~~~-~G~~~e-A~~~~~~Al~i~ 423 (490)
T 3n71_A 393 GMAVMRAGLTNWH-AGHIEV-GHGMICKAYAIL 423 (490)
T ss_dssp HHHHHHHHHHHHH-TTCHHH-HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-CCCHHH-HHHHHHHHHHHH
Confidence 9999999888766 599999 999888887644
No 14
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=85.33 E-value=17 Score=31.18 Aligned_cols=178 Identities=12% Similarity=0.033 Sum_probs=90.9
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHhhcCCCCCHHH-----HHHHHhhhhhhccchhhHHHHHHhHhhhhhhhCchhHHHH
Q 026544 8 HVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEE-----RNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKR 82 (237)
Q Consensus 8 l~~~AklaeqaeRy~Dm~~~mK~vi~~~~eLt~EE-----RnLLSvAyKn~i~~~R~s~R~l~sieqk~e~~~~~~~~~~ 82 (237)
+..++++..+.|+|+++.++++++....+.++... ++++...+. ..+..-.+..............++......
T Consensus 58 l~~l~~~y~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~ 136 (434)
T 4b4t_Q 58 ILELGQLYVTMGAKDKLREFIPHSTEYMMQFAKSKTVKVLKTLIEKFEQ-VPDSLDDQIFVCEKSIEFAKREKRVFLKHS 136 (434)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHTHHHHHTSCHHHHHHHHHHHHHHHCS-CCSCHHHHHHHHHHHHHHHHHSSCCSSHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHh-CCCCHHHHHHHHHHHHHHHHHhCccHHHHH
Confidence 67889999999999999999999887655555432 223332221 112222222222111111111111100111
Q ss_pred HHHHHHHHH------HHHHHHHHHHHHHhhhccCCCCCCChhHHHHHHHhcCcccchhhccCcchHHHHHHHHHHHHHHH
Q 026544 83 IKEYRQRVE------DELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKAYEAA 156 (237)
Q Consensus 83 i~~yk~kIe------~EL~~iC~eii~lID~~Lip~~~~~eskVFy~KmKGDyyRYlaE~~~~~~~~~~~~~A~~aY~~A 156 (237)
+.....++- .+...+.++++... +...+....+-++-..|..|.-+ ++ .++|...|++|
T Consensus 137 ~~~~la~~~~~~g~~~~A~~~l~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~-----~~-----~~~A~~~~~~a 201 (434)
T 4b4t_Q 137 LSIKLATLHYQKKQYKDSLALINDLLREF-----KKLDDKPSLVDVHLLESKVYHKL-----RN-----LAKSKASLTAA 201 (434)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHH-----TTSSCSTHHHHHHHHHHHHHHHT-----TC-----HHHHHHHHHHH
T ss_pred HHHHHHHHHHHccChHHHHHHHHHHHHHH-----HhcccchhHHHHHHHHHHHHHHh-----Cc-----HHHHHHHHHHH
Confidence 111111111 12222222222222 22222334444444444444311 11 25689999999
Q ss_pred HHHHhccCCCCCchhHHHHHHHHHHHHHHhcCccHHHHHHHHHhHHHH
Q 026544 157 TAAAASELPPTHPIRLGLALNFSVFYYEILNSPERLTCIFLFLSRQTL 204 (237)
Q Consensus 157 ~~iA~~~L~pt~PirLGLaLN~SVF~yEIl~~~~~~A~~iA~~~~~~~ 204 (237)
..++.. .+ ..|.-.|...+.+--+|...++.++ |+....++++..
T Consensus 202 l~~~~~-~~-~~~~~~~~~~~~~g~~~~~~~~y~~-A~~~~~~a~~~~ 246 (434)
T 4b4t_Q 202 RTAANS-IY-CPTQTVAELDLMSGILHCEDKDYKT-AFSYFFESFESY 246 (434)
T ss_dssp HHHHHH-SC-CCHHHHHHHHHHHHHHTTSSSCHHH-HHHHHHHHHHHH
T ss_pred HHHhhc-CC-CchHHHHHHHHHHHHHHHHHHhHHH-HHHHHHHHHHHh
Confidence 998854 43 3344456777777777888899999 999888887765
No 15
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=85.19 E-value=1.5 Score=40.37 Aligned_cols=56 Identities=13% Similarity=0.059 Sum_probs=48.1
Q ss_pred HHHHHHHHHHHHHHhccCCCCCchhHHHHHHHHHHHHHHhcCccHHHHHHHHHhHHHH
Q 026544 147 DHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERLTCIFLFLSRQTL 204 (237)
Q Consensus 147 ~~A~~aY~~A~~iA~~~L~pt~PirLGLaLN~SVF~yEIl~~~~~~A~~iA~~~~~~~ 204 (237)
+.|...|++|+++-++.++|.||.......|.++-|.. .++.++ |..+.++++.-.
T Consensus 346 ~eA~~~~~~~L~i~~~~lg~~Hp~~a~~l~nLa~~~~~-~g~~~e-A~~~~~~Al~i~ 401 (429)
T 3qwp_A 346 EEALFYGTRTMEPYRIFFPGSHPVRGVQVMKVGKLQLH-QGMFPQ-AMKNLRLAFDIM 401 (429)
T ss_dssp HHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHH-TTCHHH-HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhHHHHcCCCChHHHHHHHHHHHHHHh-cCCHHH-HHHHHHHHHHHH
Confidence 46999999999999889999999999999999888766 589999 998877776543
No 16
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=83.03 E-value=23 Score=30.78 Aligned_cols=50 Identities=8% Similarity=0.083 Sum_probs=36.5
Q ss_pred HHHHHHHHHHHHHHhccCCCCCchhHHHHHHHHHHHHHHhcCccHHHHHHHHHhHH
Q 026544 147 DHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERLTCIFLFLSRQ 202 (237)
Q Consensus 147 ~~A~~aY~~A~~iA~~~L~pt~PirLGLaLN~SVF~yEIl~~~~~~A~~iA~~~~~ 202 (237)
+.|.+.|++|+++ .|.++..-.+.+++..+.+.-+++.++ |+..-++++.
T Consensus 351 ~~A~~~~~kaL~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~-Ai~~y~kal~ 400 (472)
T 4g1t_A 351 EEAEYYFQKEFSK-----ELTPVAKQLLHLRYGNFQLYQMKCEDK-AIHHFIEGVK 400 (472)
T ss_dssp HHHHHHHHHHHHS-----CCCHHHHHHHHHHHHHHHHHTSSCHHH-HHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-----CCCChHHHHHHHHHHHHHHHHCCCHHH-HHHHHHHHHh
Confidence 4689999999753 345555556677888887777889999 8887666553
No 17
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=82.75 E-value=6.3 Score=33.81 Aligned_cols=73 Identities=8% Similarity=-0.005 Sum_probs=48.7
Q ss_pred hHHHHHHHhcCcccchhhccCcchHHHHHHHHHHHHHHHHHHHhccCCCCCchhHHHHHHHHHHHHHHhcCccHHHHHHH
Q 026544 118 STVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERLTCIFL 197 (237)
Q Consensus 118 skVFy~KmKGDyyRYlaE~~~~~~~~~~~~~A~~aY~~A~~iA~~~L~pt~PirLGLaLN~SVF~yEIl~~~~~~A~~iA 197 (237)
...+|+-.+|.++... |+ -+.|...|++|+++++. . .+|...+.+++.--..|-.+++.++ |+...
T Consensus 101 l~~~~~~~~g~~~~~~-----g~-----~~~A~~~~~~al~~~~~-~--~~~~~~a~~~~~lg~~~~~~~~~~~-A~~~~ 166 (383)
T 3ulq_A 101 LEYYFNFFRGMYELDQ-----RE-----YLSAIKFFKKAESKLIF-V--KDRIEKAEFFFKMSESYYYMKQTYF-SMDYA 166 (383)
T ss_dssp HHHHHHHHHHHHHHHT-----TC-----HHHHHHHHHHHHTTGGG-C--CCHHHHHHHHHHHHHHHHHTTCHHH-HHHHH
T ss_pred HHHHHHHHHHHHHHHh-----cC-----HHHHHHHHHHHHHHHhh-C--CCHHHHHHHHHHHHHHHHHcCCHHH-HHHHH
Confidence 4456677778776533 21 25699999999998754 3 2344455555444445555799999 99998
Q ss_pred HHhHHHH
Q 026544 198 FLSRQTL 204 (237)
Q Consensus 198 ~~~~~~~ 204 (237)
.++++-+
T Consensus 167 ~~al~~~ 173 (383)
T 3ulq_A 167 RQAYEIY 173 (383)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 8888754
No 18
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=82.35 E-value=2.6 Score=38.98 Aligned_cols=57 Identities=9% Similarity=-0.048 Sum_probs=48.4
Q ss_pred HHHHHHHHHHHHHHhccCCCCCchhHHHHHHHHHHHHHHhcCccHHHHHHHHHhHHHHH
Q 026544 147 DHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERLTCIFLFLSRQTLI 205 (237)
Q Consensus 147 ~~A~~aY~~A~~iA~~~L~pt~PirLGLaLN~SVF~yEIl~~~~~~A~~iA~~~~~~~i 205 (237)
+.|...|++|+++.++.|.|.||-.+...-|.+.-|.. +++-++ |..+.+.++.-..
T Consensus 315 ~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~-~g~~~e-A~~~~~~aL~i~~ 371 (433)
T 3qww_A 315 SELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLY-MQDWEG-ALKYGQKIIKPYS 371 (433)
T ss_dssp HHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHH-TTCHHH-HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHh-hcCHHH-HHHHHHHHHHHHH
Confidence 46788999999999889999999999888888776655 699999 9999998886543
No 19
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=82.30 E-value=18 Score=29.16 Aligned_cols=46 Identities=9% Similarity=0.066 Sum_probs=29.2
Q ss_pred HHHHHHHHHHHHHHhccCCCCCchhHHHHHHHHHHHHHHhcCccHHHHHHHHHhHH
Q 026544 147 DHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERLTCIFLFLSRQ 202 (237)
Q Consensus 147 ~~A~~aY~~A~~iA~~~L~pt~PirLGLaLN~SVF~yEIl~~~~~~A~~iA~~~~~ 202 (237)
+.|...|++|+++. |.+|. ...+.+.. |.-+++.++ |....+.+++
T Consensus 253 ~~A~~~~~~a~~~~-----~~~~~---~~~~la~~-~~~~g~~~~-A~~~~~~al~ 298 (330)
T 3hym_B 253 AEALDYHRQALVLI-----PQNAS---TYSAIGYI-HSLMGNFEN-AVDYFHTALG 298 (330)
T ss_dssp HHHHHHHHHHHHHS-----TTCSH---HHHHHHHH-HHHHTCHHH-HHHHHHTTTT
T ss_pred HHHHHHHHHHHhhC-----ccchH---HHHHHHHH-HHHhccHHH-HHHHHHHHHc
Confidence 56888899988753 34432 23344443 455799999 8887666543
No 20
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=81.68 E-value=23 Score=29.97 Aligned_cols=190 Identities=12% Similarity=-0.031 Sum_probs=96.9
Q ss_pred hhHHHHHHHHHHhcCHHHHHHHHHHHhhcCCCCCH---HHHHHHHhhhhhhccchhhHHHHHHhHhhhhhhhCchhHH--
Q 026544 6 EHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTV---EERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNV-- 80 (237)
Q Consensus 6 eel~~~AklaeqaeRy~Dm~~~mK~vi~~~~eLt~---EERnLLSvAyKn~i~~~R~s~R~l~sieqk~e~~~~~~~~-- 80 (237)
..+..+|....+.|+|++++.+.+++++.++.-.. .=...+..+|-. .+....+...+....+..+..++....
T Consensus 49 ~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~lg~~~~~-~g~~~~A~~~~~~al~~~~~~~~~~~~~~ 127 (411)
T 4a1s_A 49 LELALEGERLCNAGDCRAGVAFFQAAIQAGTEDLRTLSAIYSQLGNAYFY-LGDYNKAMQYHKHDLTLAKSMNDRLGEAK 127 (411)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHHhCcHHHHHHHHHHHHHhcccChhHHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHHHccCchHHHH
Confidence 45667888888999999999999999987655211 123344444432 344455555543222111111111100
Q ss_pred ---HHHHHH-HHHHHHHHHHHHHHHHHHhhhccCCCCCCChhHHHHHHHhcCcccchhhc------c-CcchHHHHHHHH
Q 026544 81 ---KRIKEY-RQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEF------K-GADDRKEAADHS 149 (237)
Q Consensus 81 ---~~i~~y-k~kIe~EL~~iC~eii~lID~~Lip~~~~~eskVFy~KmKGDyyRYlaE~------~-~~~~~~~~~~~A 149 (237)
....-| ...=-++-...+...+.+.... .+.....-.+...|..|...-+. . ..++-....+.|
T Consensus 128 ~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~-----~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~a~~~~~~A 202 (411)
T 4a1s_A 128 SSGNLGNTLKVMGRFDEAAICCERHLTLARQL-----GDRLSEGRALYNLGNVYHAKGKHLGQRNPGKFGDDVKEALTRA 202 (411)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH-----TCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHh-----hchHHHHHHHHHHHHHHHHcCcccccccchhhhhhhhHHHHHH
Confidence 000001 0001123334455555554332 12233344444555555443220 0 011122335788
Q ss_pred HHHHHHHHHHHhccCCCCCchhHHHHHHHHHHHHHHhcCccHHHHHHHHHhHHHHH
Q 026544 150 LKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERLTCIFLFLSRQTLI 205 (237)
Q Consensus 150 ~~aY~~A~~iA~~~L~pt~PirLGLaLN~SVF~yEIl~~~~~~A~~iA~~~~~~~i 205 (237)
...|++|++++... +.+|. .+.+++.-...|.-+++.++ |....+++++-..
T Consensus 203 ~~~~~~al~~~~~~--~~~~~-~~~~~~~la~~~~~~g~~~~-A~~~~~~al~~~~ 254 (411)
T 4a1s_A 203 VEFYQENLKLMRDL--GDRGA-QGRACGNLGNTYYLLGDFQA-AIEHHQERLRIAR 254 (411)
T ss_dssp HHHHHHHHHHHHHH--TCHHH-HHHHHHHHHHHHHHTTCHHH-HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHc--CCHHH-HHHHHHHHHHHHHHcCChHH-HHHHHHHHHHHHH
Confidence 89999999888543 22344 44444444445556799999 9998888776543
No 21
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=81.41 E-value=2.6 Score=38.97 Aligned_cols=98 Identities=14% Similarity=0.088 Sum_probs=65.6
Q ss_pred HHHHHHHHHHHHHhhhccCCCCCCChhHHHHHHHhcCcccchhhccCcchHHHHHHHHHHHHHHHHHHHhccCCCCCchh
Q 026544 92 DELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKAYEAATAAAASELPPTHPIR 171 (237)
Q Consensus 92 ~EL~~iC~eii~lID~~Lip~~~~~eskVFy~KmKGDyyRYlaE~~~~~~~~~~~~~A~~aY~~A~~iA~~~L~pt~Pir 171 (237)
+|...+|...+++-.+.|=|...+ ..=-+.--|.-|+.+ | + -+.|...|++|+++-++.++|.||--
T Consensus 315 ~eA~~~~~~~L~i~~~~lg~~Hp~---~a~~~~nLa~~y~~~-----g-~----~~eA~~~~~~aL~i~~~~lG~~Hp~~ 381 (433)
T 3qww_A 315 SELLEICELSQEKMSSVFEDSNVY---MLHMMYQAMGVCLYM-----Q-D----WEGALKYGQKIIKPYSKHYPVYSLNV 381 (433)
T ss_dssp HHHHHHHHHHHHHHTTTBCTTSHH---HHHHHHHHHHHHHHT-----T-C----HHHHHHHHHHHHHHHHHHSCSSCHHH
T ss_pred HHHHHHHHHHHHHhhCccChhchH---HHHHHHHHHHHHHhh-----c-C----HHHHHHHHHHHHHHHHHHcCCCChHH
Confidence 455667777777776666454321 111112222222211 1 1 24699999999999989999999999
Q ss_pred HHHHHHHHHHHHHHhcCccHHHHHHHHHhHHHH
Q 026544 172 LGLALNFSVFYYEILNSPERLTCIFLFLSRQTL 204 (237)
Q Consensus 172 LGLaLN~SVF~yEIl~~~~~~A~~iA~~~~~~~ 204 (237)
.....|.+.-|.. .++.++ |..+.+.|+.-.
T Consensus 382 a~~l~nLa~~~~~-qg~~~e-A~~~~~~Al~i~ 412 (433)
T 3qww_A 382 ASMWLKLGRLYMG-LENKAA-GEKALKKAIAIM 412 (433)
T ss_dssp HHHHHHHHHHHHH-TTCHHH-HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-ccCHHH-HHHHHHHHHHHH
Confidence 9888888887655 599999 999888777643
No 22
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=80.65 E-value=20 Score=28.57 Aligned_cols=54 Identities=13% Similarity=-0.103 Sum_probs=38.0
Q ss_pred HHHHHHHHHHHHHHhccCCCCCchhHHHHHHHHHHHHHHhcCccHHHHHHHHHhHHHH
Q 026544 147 DHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERLTCIFLFLSRQTL 204 (237)
Q Consensus 147 ~~A~~aY~~A~~iA~~~L~pt~PirLGLaLN~SVF~yEIl~~~~~~A~~iA~~~~~~~ 204 (237)
+.|.+.|++|++++... .+|...+.+++.-...|.-.++.++ |....+++++..
T Consensus 200 ~~A~~~~~~a~~~~~~~---~~~~~~~~~~~~l~~~~~~~g~~~~-A~~~~~~al~~~ 253 (338)
T 3ro2_A 200 RDAVIAHEQRLLIAKEF---GDKAAERRAYSNLGNAYIFLGEFET-ASEYYKKTLLLA 253 (338)
T ss_dssp HHHHHHHHHHHHHHHHH---TCHHHHHHHHHHHHHHHHHHTCHHH-HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhc---CChHHHHHHHHHHHHHHHHcCCHHH-HHHHHHHHHHHH
Confidence 46888999999888542 2344555555555556667799999 998888777654
No 23
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=80.46 E-value=2.6 Score=33.34 Aligned_cols=56 Identities=11% Similarity=0.022 Sum_probs=47.1
Q ss_pred HHHHHHHHHHHHHHhccCCCCCchhHHHHHHHHHHHHHHhcCccHHHHHHHHHhHHHH
Q 026544 147 DHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERLTCIFLFLSRQTL 204 (237)
Q Consensus 147 ~~A~~aY~~A~~iA~~~L~pt~PirLGLaLN~SVF~yEIl~~~~~~A~~iA~~~~~~~ 204 (237)
+.|...|++|+++.++..+|.||.......|.+..++. +++.++ |....+++++.+
T Consensus 102 ~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~-A~~~~~~al~~~ 157 (283)
T 3edt_B 102 KEAEPLCKRALEIREKVLGKFHPDVAKQLNNLALLCQN-QGKAEE-VEYYYRRALEIY 157 (283)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHT-TTCHHH-HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHH-cCCHHH-HHHHHHHHHHHH
Confidence 56999999999999888888899888888888776665 599999 999888888763
No 24
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=80.02 E-value=20 Score=28.26 Aligned_cols=53 Identities=15% Similarity=0.013 Sum_probs=34.4
Q ss_pred HHHHHHHHHHHHHhccCCCCCchhHHHHHHHHHHHHHHhcCccHHHHHHHHHhHH
Q 026544 148 HSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERLTCIFLFLSRQ 202 (237)
Q Consensus 148 ~A~~aY~~A~~iA~~~L~pt~PirLGLaLN~SVF~yEIl~~~~~~A~~iA~~~~~ 202 (237)
.|...|++|.++....-.+. +-.+.-++..--..|.-+++.++ |....+.+++
T Consensus 197 ~A~~~~~~a~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~-A~~~~~~al~ 249 (272)
T 3u4t_A 197 LAKPYYEKLIEVCAPGGAKY-KDELIEANEYIAYYYTINRDKVK-ADAAWKNILA 249 (272)
T ss_dssp TTHHHHHHHHHHHGGGGGGG-HHHHHHHHHHHHHHHHHTTCHHH-HHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcccccc-hHHHHHHHHHHHHHHHHcCCHHH-HHHHHHHHHh
Confidence 48889999999885433332 23333344433445566799999 9988777664
No 25
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=79.90 E-value=13 Score=26.08 Aligned_cols=148 Identities=14% Similarity=0.037 Sum_probs=77.5
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHhhcCCCCCHHHHHHHHhhhhhhccchhhHHHHHHhHhhhhhhhCchhHHHHHHHHH
Q 026544 8 HVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYR 87 (237)
Q Consensus 8 l~~~AklaeqaeRy~Dm~~~mK~vi~~~~eLt~EERnLLSvAyKn~i~~~R~s~R~l~sieqk~e~~~~~~~~~~i~~yk 87 (237)
+..++.+....|+|++++.+.++.++..+..... ..... +|..+..+-.. .++ ..+.
T Consensus 12 ~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~--~~~~~-----------~~~~l~~~~~~---~g~--~~~A----- 68 (164)
T 3ro3_A 12 FGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDK--AAERI-----------AYSNLGNAYIF---LGE--FETA----- 68 (164)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCH--HHHHH-----------HHHHHHHHHHH---TTC--HHHH-----
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhCCc--hHHHH-----------HHHHHHHHHHH---cCC--HHHH-----
Confidence 4577888888999999999999988653321111 11111 22222111111 111 1111
Q ss_pred HHHHHHHHHHHHHHHHHhhhccCCCCCCChhHHHHHHHhcCcccchhhccCcchHHHHHHHHHHHHHHHHHHHhccCCCC
Q 026544 88 QRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKAYEAATAAAASELPPT 167 (237)
Q Consensus 88 ~kIe~EL~~iC~eii~lID~~Lip~~~~~eskVFy~KmKGDyyRYlaE~~~~~~~~~~~~~A~~aY~~A~~iA~~~L~pt 167 (237)
...+...+.+.... .++......+-..|..|... ++ -+.|...+++|++++.. .+
T Consensus 69 -------~~~~~~a~~~~~~~-----~~~~~~~~~~~~l~~~~~~~-----~~-----~~~A~~~~~~a~~~~~~-~~-- 123 (164)
T 3ro3_A 69 -------SEYYKKTLLLARQL-----KDRAVEAQSCYSLGNTYTLL-----QD-----YEKAIDYHLKHLAIAQE-LK-- 123 (164)
T ss_dssp -------HHHHHHHHHHHHHT-----TCHHHHHHHHHHHHHHHHHT-----TC-----HHHHHHHHHHHHHHHHH-TT--
T ss_pred -------HHHHHHHHHHHHHh-----CCcHHHHHHHHHHHHHHHHH-----hh-----HHHHHHHHHHHHHHHHH-cc--
Confidence 22223333333221 22333333344445444322 21 24688999999998854 22
Q ss_pred CchhHHHHHHHHHHHHHHhcCccHHHHHHHHHhHHHH
Q 026544 168 HPIRLGLALNFSVFYYEILNSPERLTCIFLFLSRQTL 204 (237)
Q Consensus 168 ~PirLGLaLN~SVF~yEIl~~~~~~A~~iA~~~~~~~ 204 (237)
+|...+.++..--..|.-+++.++ |.....++++-+
T Consensus 124 ~~~~~~~~~~~la~~~~~~g~~~~-A~~~~~~a~~~~ 159 (164)
T 3ro3_A 124 DRIGEGRACWSLGNAYTALGNHDQ-AMHFAEKHLEIS 159 (164)
T ss_dssp CHHHHHHHHHHHHHHHHHHTCHHH-HHHHHHHHHHHH
T ss_pred chHhHHHHHHHHHHHHHHccCHHH-HHHHHHHHHHHH
Confidence 344444444433445556699999 999888777654
No 26
>3lf9_A 4E10_D0_1IS1A_001_C (T161); epitope-scaffold, immune system; 2.00A {Artificial gene}
Probab=79.78 E-value=5.9 Score=30.99 Aligned_cols=86 Identities=21% Similarity=0.075 Sum_probs=55.0
Q ss_pred cCHHHHHHHHHHHhh---cCCCCCHHHHHHHHhhhhhhccchhhHHHHHHhH--hh--hhhhhCchhHHHHHHHHHHHHH
Q 026544 19 ERYDEMVEAMKKVAK---LDVELTVEERNLVSVGYKNVIGARRASWRILSSI--EQ--KEEAKGNEQNVKRIKEYRQRVE 91 (237)
Q Consensus 19 eRy~Dm~~~mK~vi~---~~~eLt~EERnLLSvAyKn~i~~~R~s~R~l~si--eq--k~e~~~~~~~~~~i~~yk~kIe 91 (237)
+|.|..++++|.-+. .|++||.|-|.=|.--.|...-.-|-|.|.+..- .. +.+..+ .+-++-..+.+
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~plTEERRKeLVK~akk~aEeaKVAIRNIRRDAnd~lKKl~Kdk-----eISEDe~kr~e 85 (121)
T 3lf9_A 11 ERMDKSVEALKNNLSKVRTGGGGTEERRKDLVKIVRGEAEGGRVAVRNIARDAANDLAALGKDK-----EVNWFDISQAL 85 (121)
T ss_dssp HHHHHHHHHHHHHHHHCCCSSBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGCT-----TSCHHHHHHHH
T ss_pred HHHHHHHHHHHHhhHhhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhhhcC-----CCCHHHHHhHH
Confidence 577888888877653 4899999999999988888888888888877421 10 111011 01133344556
Q ss_pred HHHHHHHHHHHHHhhhcc
Q 026544 92 DELAKICNDILSVIDEHL 109 (237)
Q Consensus 92 ~EL~~iC~eii~lID~~L 109 (237)
+++..+.+..+.-||..|
T Consensus 86 ~eIQKLTDkyIkkID~ll 103 (121)
T 3lf9_A 86 WEIQKLTDVAVKKIDEVL 103 (121)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 666666666666666544
No 27
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=79.66 E-value=20 Score=27.93 Aligned_cols=59 Identities=15% Similarity=0.030 Sum_probs=41.9
Q ss_pred hhHHHHHHHHHHhcCHHHHHHHHHHHhhcCCCCCHHHHHHHHhhhhhhccchhhHHHHHH
Q 026544 6 EHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILS 65 (237)
Q Consensus 6 eel~~~AklaeqaeRy~Dm~~~mK~vi~~~~eLt~EERnLLSvAyKn~i~~~R~s~R~l~ 65 (237)
+.+..++...-+.|+|++++.+..++++.+|+-+..-...+..+|-. .+....|...+.
T Consensus 8 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~-~~~~~~A~~~~~ 66 (228)
T 4i17_A 8 NQLKNEGNDALNAKNYAVAFEKYSEYLKLTNNQDSVTAYNCGVCADN-IKKYKEAADYFD 66 (228)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHhccCCCCcHHHHHHHHHHHH-hhcHHHHHHHHH
Confidence 46778888999999999999999999988774444444445555543 355555655554
No 28
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=79.28 E-value=3.5 Score=38.77 Aligned_cols=56 Identities=13% Similarity=-0.025 Sum_probs=47.9
Q ss_pred HHHHHHHHHHHHHHhccCCCCCchhHHHHHHHHHHHHHHhcCccHHHHHHHHHhHHHH
Q 026544 147 DHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERLTCIFLFLSRQTL 204 (237)
Q Consensus 147 ~~A~~aY~~A~~iA~~~L~pt~PirLGLaLN~SVF~yEIl~~~~~~A~~iA~~~~~~~ 204 (237)
+.|...|++|+++..+.|.|.||-.+...-|.+..|.. +++-++ |..+.+.++.-.
T Consensus 326 ~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~-~g~~~e-A~~~~~~aL~i~ 381 (490)
T 3n71_A 326 HEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSY-LQAYEE-ASHYARRMVDGY 381 (490)
T ss_dssp HHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHH-TTCHHH-HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHH-hcCHHH-HHHHHHHHHHHH
Confidence 35777899999999889999999999999888877765 599999 999998887654
No 29
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=78.98 E-value=36 Score=30.48 Aligned_cols=46 Identities=13% Similarity=0.100 Sum_probs=30.5
Q ss_pred HHHHHHHHHHHHHHhccCCCCCchhHHHHHHHHHHHHHHhcCccHHHHHHHHHhHH
Q 026544 147 DHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERLTCIFLFLSRQ 202 (237)
Q Consensus 147 ~~A~~aY~~A~~iA~~~L~pt~PirLGLaLN~SVF~yEIl~~~~~~A~~iA~~~~~ 202 (237)
+.|.+.|++++++ .|.+|. ...+.+ ..|.-.++.++ |....+++++
T Consensus 533 ~~A~~~~~~~~~~-----~p~~~~---~~~~l~-~~~~~~g~~~~-A~~~~~~~l~ 578 (597)
T 2xpi_A 533 DAAIDALNQGLLL-----STNDAN---VHTAIA-LVYLHKKIPGL-AITHLHESLA 578 (597)
T ss_dssp HHHHHHHHHHHHH-----SSCCHH---HHHHHH-HHHHHTTCHHH-HHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCChH---HHHHHH-HHHHHhCCHHH-HHHHHHHHHh
Confidence 5688888888765 355652 223333 34566899999 9988777665
No 30
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=75.08 E-value=3.2 Score=38.14 Aligned_cols=57 Identities=12% Similarity=0.057 Sum_probs=46.2
Q ss_pred HHHHHHHHHHHHHHhccCCCCCchhHHHHHHHHHHHHHHhcCccHHHHHHHHHhHHHHH
Q 026544 147 DHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERLTCIFLFLSRQTLI 205 (237)
Q Consensus 147 ~~A~~aY~~A~~iA~~~L~pt~PirLGLaLN~SVF~yEIl~~~~~~A~~iA~~~~~~~i 205 (237)
+.|...|++|+++..+.|+|.||-.+...-|.+.-|.. +++-++ |..+.+.++.-..
T Consensus 304 ~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~-~g~~~e-A~~~~~~~L~i~~ 360 (429)
T 3qwp_A 304 EQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACIN-LGLLEE-ALFYGTRTMEPYR 360 (429)
T ss_dssp HHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHH-HTCHHH-HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHh-hccHHH-HHHHHHHHHHhHH
Confidence 35667778888777778999999999998888777655 699999 9999988876553
No 31
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=74.78 E-value=34 Score=28.12 Aligned_cols=75 Identities=8% Similarity=0.042 Sum_probs=53.9
Q ss_pred hHHHHHHHhcCcccchhhccCcchHHHHHHHHHHHHHHHHHHHhccCCCCCchhHHHHHHHHHHHHHHhcCccHHHHHHH
Q 026544 118 STVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERLTCIFL 197 (237)
Q Consensus 118 skVFy~KmKGDyyRYlaE~~~~~~~~~~~~~A~~aY~~A~~iA~~~L~pt~PirLGLaLN~SVF~yEIl~~~~~~A~~iA 197 (237)
..+-.+...|..|..+-+ -+.|...|++|++.++ .++..+|....+..|.+..|++ +++.++ |+...
T Consensus 153 ~~~~~~~~lg~~y~~~g~----------~~~A~~~~~~al~~~~-~~~~~~~~~~~~~~nlg~~y~~-~~~y~~-A~~~~ 219 (293)
T 3u3w_A 153 QNLYIENAIANIYAENGY----------LKKGIDLFEQILKQLE-ALHDNEEFDVKVRYNHAKALYL-DSRYEE-SLYQV 219 (293)
T ss_dssp HHHHHHHHHHHHHHHTTC----------HHHHHHHHHHHHHHHH-HSSCCHHHHHHHHHHHHHHHHH-TTCHHH-HHHHH
T ss_pred HHHHHHHHHHHHHHHcCC----------HHHHHHHHHHHHHHHH-hcccchhHHHHHHHHHHHHHHH-HhHHHH-HHHHH
Confidence 334445556666643311 2569999999999985 4666667777788888888776 599999 99998
Q ss_pred HHhHHHHH
Q 026544 198 FLSRQTLI 205 (237)
Q Consensus 198 ~~~~~~~i 205 (237)
+++++-+.
T Consensus 220 ~~al~~~~ 227 (293)
T 3u3w_A 220 NKAIEISC 227 (293)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 88887654
No 32
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=72.80 E-value=40 Score=28.00 Aligned_cols=54 Identities=13% Similarity=-0.066 Sum_probs=36.0
Q ss_pred HHHHHHHHHHHHHHhccCCCCCchhHHHHHHHHHHHHHHhcCccHHHHHHHHHhHHHH
Q 026544 147 DHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERLTCIFLFLSRQTL 204 (237)
Q Consensus 147 ~~A~~aY~~A~~iA~~~L~pt~PirLGLaLN~SVF~yEIl~~~~~~A~~iA~~~~~~~ 204 (237)
+.|...|++|++++.. . .+|...+.+++.-...|.-+++.++ |....+++++-.
T Consensus 204 ~~A~~~~~~al~~~~~-~--~~~~~~~~~~~~la~~~~~~g~~~~-A~~~~~~al~~~ 257 (406)
T 3sf4_A 204 RDAVIAHEQRLLIAKE-F--GDKAAERRAYSNLGNAYIFLGEFET-ASEYYKKTLLLA 257 (406)
T ss_dssp HHHHHHHHHHHHHHHH-T--TCHHHHHHHHHHHHHHHHHTTCHHH-HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHh-c--CCcHHHHHHHHHHHHHHHHcCChHH-HHHHHHHHHHHH
Confidence 4688899999998864 2 2233444444444445556799999 998888777544
No 33
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=72.45 E-value=39 Score=27.81 Aligned_cols=55 Identities=18% Similarity=0.268 Sum_probs=30.5
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHhhcCCCCCHHHHHHHHhhhhhhccchhhHHHHH
Q 026544 8 HVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRIL 64 (237)
Q Consensus 8 l~~~AklaeqaeRy~Dm~~~mK~vi~~~~eLt~EERnLLSvAyKn~i~~~R~s~R~l 64 (237)
+..++.+....|+|++++.+.+++++.+|. +.+-...+..+|-. .+....|...+
T Consensus 101 ~~~l~~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~l~~~~~~-~g~~~~A~~~~ 155 (368)
T 1fch_A 101 WQYLGTTQAENEQELLAISALRRCLELKPD-NQTALMALAVSFTN-ESLQRQACEIL 155 (368)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHH-TTCHHHHHHHH
T ss_pred HHHHHHHHHHCcCHHHHHHHHHHHHhcCCC-CHHHHHHHHHHHHH-cCCHHHHHHHH
Confidence 445666667777777777777777766554 23334444444432 23334444444
No 34
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=72.37 E-value=11 Score=32.32 Aligned_cols=75 Identities=7% Similarity=0.040 Sum_probs=49.0
Q ss_pred hhHHHHHHHhcCcccchhhccCcchHHHHHHHHHHHHHHHHHHHhccCCCCCchhHHHHHHHHHHHHHHhcCccHHHHHH
Q 026544 117 ESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERLTCIF 196 (237)
Q Consensus 117 eskVFy~KmKGDyyRYlaE~~~~~~~~~~~~~A~~aY~~A~~iA~~~L~pt~PirLGLaLN~SVF~yEIl~~~~~~A~~i 196 (237)
.-..+|+-.+|.++... |+ -+.|...|++|.+++.. .+ .+|..-....|.+..| -.+++.++ |+..
T Consensus 98 ~l~~~~~~~~g~~~~~~-----g~-----~~~A~~~~~~al~~~~~-~~-~~~~~a~~~~~lg~~y-~~~~~~~~-A~~~ 163 (378)
T 3q15_A 98 LLKYYSLFFRGMYEFDQ-----KE-----YVEAIGYYREAEKELPF-VS-DDIEKAEFHFKVAEAY-YHMKQTHV-SMYH 163 (378)
T ss_dssp HHHHHHHHHHHHHHHHT-----TC-----HHHHHHHHHHHHTTGGG-CC-CHHHHHHHHHHHHHHH-HHTTCHHH-HHHH
T ss_pred HHHHHHHHHHHHHHHHH-----CC-----HHHHHHHHHHHHHHHhh-CC-ChHHHHHHHHHHHHHH-HHcCCcHH-HHHH
Confidence 44556677788776543 22 25699999999998853 32 2344444444555554 45799999 9998
Q ss_pred HHHhHHHHH
Q 026544 197 LFLSRQTLI 205 (237)
Q Consensus 197 A~~~~~~~i 205 (237)
..++++-+.
T Consensus 164 ~~~al~~~~ 172 (378)
T 3q15_A 164 ILQALDIYQ 172 (378)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 888877543
No 35
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=68.29 E-value=43 Score=26.54 Aligned_cols=188 Identities=10% Similarity=-0.025 Sum_probs=98.8
Q ss_pred hhHHHHHHHHHHhcCHHHHHHHHHHHhhcCCCCCHH----HHHHHHhhhhhhccchhhHHHHHHhHhhhhhhhCchhHH-
Q 026544 6 EHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVE----ERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNV- 80 (237)
Q Consensus 6 eel~~~AklaeqaeRy~Dm~~~mK~vi~~~~eLt~E----ERnLLSvAyKn~i~~~R~s~R~l~sieqk~e~~~~~~~~- 80 (237)
..+...|....+.|+|++++.+.+++++..|. +.+ =...+..+|-. .+....+...+....+.....+.....
T Consensus 6 ~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~~~~~l~~~~~~-~g~~~~A~~~~~~al~~~~~~~~~~~~~ 83 (338)
T 3ro2_A 6 LELALEGERLCKSGDCRAGVSFFEAAVQVGTE-DLKTLSAIYSQLGNAYFY-LHDYAKALEYHHHDLTLARTIGDQLGEA 83 (338)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCS-CHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHHTCHHHHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHhhCcc-cHHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHhhcccccHHHH
Confidence 46677889999999999999999999987654 222 12233444332 333444444443221111111111110
Q ss_pred ----HHHHHH-HHHHHHHHHHHHHHHHHHhhhccCCCCCCChhHHHHHHHhcCcccchhhcc----------CcchHHHH
Q 026544 81 ----KRIKEY-RQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFK----------GADDRKEA 145 (237)
Q Consensus 81 ----~~i~~y-k~kIe~EL~~iC~eii~lID~~Lip~~~~~eskVFy~KmKGDyyRYlaE~~----------~~~~~~~~ 145 (237)
....-| ...=-++-...+...+++... ..++......+...|..|...-+.. ..++-...
T Consensus 84 ~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~-----~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 158 (338)
T 3ro2_A 84 KASGNLGNTLKVLGNFDEAIVCCQRHLDISRE-----LNDKVGEARALYNLGNVYHAKGKSFGCPGPQDTGEFPEDVRNA 158 (338)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH-----TTCHHHHHHHHHHHHHHHHHHHHTSSSSSCC----CCHHHHHH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHHHHH-----hcCchHHHHHHHHHHHHHHHcCcccccchhhhhhhhhhhHHHH
Confidence 000111 000112333344455554433 2333444555566666666554411 01122234
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCchhHHHHHHHHHHHHHHhcCccHHHHHHHHHhHHHH
Q 026544 146 ADHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERLTCIFLFLSRQTL 204 (237)
Q Consensus 146 ~~~A~~aY~~A~~iA~~~L~pt~PirLGLaLN~SVF~yEIl~~~~~~A~~iA~~~~~~~ 204 (237)
.+.|...|++|++++... + ++...+.+++.-...|.-+++.++ |....+++++..
T Consensus 159 ~~~A~~~~~~a~~~~~~~-~--~~~~~~~~~~~l~~~~~~~~~~~~-A~~~~~~a~~~~ 213 (338)
T 3ro2_A 159 LQAAVDLYEENLSLVTAL-G--DRAAQGRAFGNLGNTHYLLGNFRD-AVIAHEQRLLIA 213 (338)
T ss_dssp HHHHHHHHHHHHHHHHHH-T--CHHHHHHHHHHHHHHHHHHTCHHH-HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhc-C--CHHHHHHHHHHHHHHHHHhCCHHH-HHHHHHHHHHHH
Confidence 677888899998887542 2 333444444444455556799999 999888877654
No 36
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=67.20 E-value=53 Score=27.21 Aligned_cols=188 Identities=10% Similarity=-0.014 Sum_probs=94.6
Q ss_pred hHHHHHHHHHHhcCHHHHHHHHHHHhhcCCCCCH---HHHHHHHhhhhhhccchhhHHHHHHhHhhhhhhhCchhHH---
Q 026544 7 HHVYLARLAEQAERYDEMVEAMKKVAKLDVELTV---EERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNV--- 80 (237)
Q Consensus 7 el~~~AklaeqaeRy~Dm~~~mK~vi~~~~eLt~---EERnLLSvAyKn~i~~~R~s~R~l~sieqk~e~~~~~~~~--- 80 (237)
.+..++...-+.|+|++++.++.++++.+|.-.. .-...++.+|-. .+....|...+.....-....++....
T Consensus 11 ~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~l~~~~~~-~g~~~~A~~~~~~al~~~~~~~~~~~~~~~ 89 (406)
T 3sf4_A 11 ELALEGERLCKSGDCRAGVSFFEAAVQVGTEDLKTLSAIYSQLGNAYFY-LHDYAKALEYHHHDLTLARTIGDQLGEAKA 89 (406)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHHHHhccccHHHHHH
Confidence 4567788888899999999999999987654221 223344444433 344444544443221111111111100
Q ss_pred --HHHHHHH-HHHHHHHHHHHHHHHHHhhhccCCCCCCChhHHHHHHHhcCcccchhh-------ccC---cchHHHHHH
Q 026544 81 --KRIKEYR-QRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAE-------FKG---ADDRKEAAD 147 (237)
Q Consensus 81 --~~i~~yk-~kIe~EL~~iC~eii~lID~~Lip~~~~~eskVFy~KmKGDyyRYlaE-------~~~---~~~~~~~~~ 147 (237)
....-|. ..=-++-...+...+++.... .++......+-..|..|...-+ -.. .++-....+
T Consensus 90 ~~~la~~~~~~g~~~~A~~~~~~al~~~~~~-----~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~ 164 (406)
T 3sf4_A 90 SGNLGNTLKVLGNFDEAIVCCQRHLDISREL-----NDKVGEARALYNLGNVYHAKGKSFGCPGPQDVGEFPEEVRDALQ 164 (406)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH-----TCHHHHHHHHHHHHHHHHHHHHTCC-------CCCCHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHhc-----ccccchHHHHHHHHHHHHHcCCcccccccchhhhhhhhHHHHHH
Confidence 0001110 001123334445555544332 1222333333334444433322 111 122333467
Q ss_pred HHHHHHHHHHHHHhccCCCCCchhHHHHHHHHHHHHHHhcCccHHHHHHHHHhHHHH
Q 026544 148 HSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERLTCIFLFLSRQTL 204 (237)
Q Consensus 148 ~A~~aY~~A~~iA~~~L~pt~PirLGLaLN~SVF~yEIl~~~~~~A~~iA~~~~~~~ 204 (237)
.|...|++|++++.. . +.+|.......|.+ ..|--+++.++ |....+++++-.
T Consensus 165 ~A~~~~~~al~~~~~-~-~~~~~~~~~~~~la-~~~~~~g~~~~-A~~~~~~al~~~ 217 (406)
T 3sf4_A 165 AAVDFYEENLSLVTA-L-GDRAAQGRAFGNLG-NTHYLLGNFRD-AVIAHEQRLLIA 217 (406)
T ss_dssp HHHHHHHHHHHHHHH-T-TCHHHHHHHHHHHH-HHHHHHTBHHH-HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh-c-cCcHHHHHHHHHHH-HHHHHccCHHH-HHHHHHHHHHHH
Confidence 888999999998864 3 23344444444554 44555699999 999888887654
No 37
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=67.19 E-value=46 Score=26.49 Aligned_cols=63 Identities=11% Similarity=0.017 Sum_probs=45.2
Q ss_pred HhhHHHHHHHHHHhcCHHHHHHHHHHHhhcCCCC--CHHHHHHHHhhhhhhccchhhHHHHHHhHh
Q 026544 5 REHHVYLARLAEQAERYDEMVEAMKKVAKLDVEL--TVEERNLVSVGYKNVIGARRASWRILSSIE 68 (237)
Q Consensus 5 reel~~~AklaeqaeRy~Dm~~~mK~vi~~~~eL--t~EERnLLSvAyKn~i~~~R~s~R~l~sie 68 (237)
-+.+..+|...-+.|+|++++...++++...|.- ..+=...+..+|-. .+....|...+....
T Consensus 15 ~~~~~~~a~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~~-~~~~~~A~~~~~~~l 79 (261)
T 3qky_A 15 PQEAFERAMEFYNQGKYDRAIEYFKAVFTYGRTHEWAADAQFYLARAYYQ-NKEYLLAASEYERFI 79 (261)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHGGGCSCSTTHHHHHHHHHHHHHH-TTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCcchHHHHHHHHHHHHH-hCcHHHHHHHHHHHH
Confidence 3567788899999999999999999999876543 25555566666644 456667777765543
No 38
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=67.05 E-value=49 Score=26.72 Aligned_cols=46 Identities=7% Similarity=-0.018 Sum_probs=29.2
Q ss_pred HHHHHHHHHHHHHHhccCCCCCchhHHHHHHHHHHHHHHhcCccHHHHHHHHHhHH
Q 026544 147 DHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERLTCIFLFLSRQ 202 (237)
Q Consensus 147 ~~A~~aY~~A~~iA~~~L~pt~PirLGLaLN~SVF~yEIl~~~~~~A~~iA~~~~~ 202 (237)
+.|...|++|++. .|.+| ....+.+.. |..+++.++ |....+++++
T Consensus 289 ~~A~~~~~~~~~~-----~~~~~---~~~~~~~~~-~~~~g~~~~-A~~~~~~a~~ 334 (359)
T 3ieg_A 289 VEAIRICSEVLQM-----EPDNV---NALKDRAEA-YLIEEMYDE-AIQDYEAAQE 334 (359)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHH-HHHTTCHHH-HHHHHHHHHT
T ss_pred HHHHHHHHHHHHh-----CcccH---HHHHHHHHH-HHHcCCHHH-HHHHHHHHHh
Confidence 4577788877764 44444 344455444 455788999 8887666654
No 39
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=66.93 E-value=62 Score=27.90 Aligned_cols=56 Identities=11% Similarity=0.024 Sum_probs=35.7
Q ss_pred HHHHHHHHHHHHHHHhccC--CCCC----chhHHHHHHHHHHHHHHhcCccHHHHHHHHHhHHH
Q 026544 146 ADHSLKAYEAATAAAASEL--PPTH----PIRLGLALNFSVFYYEILNSPERLTCIFLFLSRQT 203 (237)
Q Consensus 146 ~~~A~~aY~~A~~iA~~~L--~pt~----PirLGLaLN~SVF~yEIl~~~~~~A~~iA~~~~~~ 203 (237)
.+.|...|+++.+.-...+ .|.+ |-......+.+..++ -.++.++ |+.....+++.
T Consensus 205 ~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-A~~~~~~~l~~ 266 (514)
T 2gw1_A 205 YDKADESFTKAARLFEEQLDKNNEDEKLKEKLAISLEHTGIFKF-LKNDPLG-AHEDIKKAIEL 266 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTSTTCHHHHHHHHHHHHHHHHHHH-HSSCHHH-HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhhhccCccccccChHHHHHHHHHHHHHH-HCCCHHH-HHHHHHHHHhh
Confidence 3567888888887433223 4554 555555555555444 4689999 99888777654
No 40
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=65.78 E-value=50 Score=26.42 Aligned_cols=55 Identities=9% Similarity=-0.136 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHHHHhccCCCCC-chhHHHHHHHHHHHHHHhcCccHHHHHHHHHhHHH
Q 026544 147 DHSLKAYEAATAAAASELPPTH-PIRLGLALNFSVFYYEILNSPERLTCIFLFLSRQT 203 (237)
Q Consensus 147 ~~A~~aY~~A~~iA~~~L~pt~-PirLGLaLN~SVF~yEIl~~~~~~A~~iA~~~~~~ 203 (237)
+.|...|++|+++....-.+.+ |-......+.+.. |.-+++.++ |....+.+++.
T Consensus 210 ~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~la~~-~~~~g~~~~-A~~~~~~a~~~ 265 (330)
T 3hym_B 210 KTAEKWFLDALEKIKAIGNEVTVDKWEPLLNNLGHV-CRKLKKYAE-ALDYHRQALVL 265 (330)
T ss_dssp HHHHHHHHHHHHHHTTTSCSCTTTTCCHHHHHHHHH-HHHTTCHHH-HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhccccccccHHHHHHHHHHHH-HHHhcCHHH-HHHHHHHHHhh
Confidence 5689999999998754333222 2222344455554 455799999 99887777654
No 41
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=65.64 E-value=77 Score=28.50 Aligned_cols=50 Identities=16% Similarity=0.033 Sum_probs=34.6
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCchhHHHHHHHHHHHHHHhcCccHHHHHHHHHhHH
Q 026544 146 ADHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERLTCIFLFLSRQ 202 (237)
Q Consensus 146 ~~~A~~aY~~A~~iA~~~L~pt~PirLGLaLN~SVF~yEIl~~~~~~A~~iA~~~~~ 202 (237)
.+.|..+|++|+++ .|.+|-......|.+..|+. +++.++ |....+++++
T Consensus 237 ~~~A~~~~~~al~~-----~p~~~~~~~~~~~lg~~~~~-~g~~~~-A~~~~~~al~ 286 (474)
T 4abn_A 237 SQQALSAYAQAEKV-----DRKASSNPDLHLNRATLHKY-EESYGE-ALEGFSQAAA 286 (474)
T ss_dssp HHHHHHHHHHHHHH-----CGGGGGCHHHHHHHHHHHHH-TTCHHH-HHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh-----CCCcccCHHHHHHHHHHHHH-cCCHHH-HHHHHHHHHH
Confidence 46789999999876 23222445566677666655 689999 8887777765
No 42
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=65.49 E-value=63 Score=27.48 Aligned_cols=56 Identities=20% Similarity=0.131 Sum_probs=37.4
Q ss_pred HHHHHHHHHhcCHHHHHHHHHHHhhcCCCCCHHHHHHHHhhhhhhccchhhHHHHHHh
Q 026544 9 VYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSS 66 (237)
Q Consensus 9 ~~~AklaeqaeRy~Dm~~~mK~vi~~~~eLt~EERnLLSvAyKn~i~~~R~s~R~l~s 66 (237)
..+|....+.|+|++++..+.++++..|. +.+-...+..+|-. .+....|...+..
T Consensus 147 ~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~l~~~~~~-~g~~~~A~~~~~~ 202 (450)
T 2y4t_A 147 RSQALNAFGSGDYTAAIAFLDKILEVCVW-DAELRELRAECFIK-EGEPRKAISDLKA 202 (450)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHH-TTCGGGGHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCC-ChHHHHHHHHHHHH-CCCHHHHHHHHHH
Confidence 44577788899999999999999887554 34445555555543 3445556555543
No 43
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=65.43 E-value=15 Score=26.73 Aligned_cols=46 Identities=15% Similarity=0.182 Sum_probs=34.0
Q ss_pred HHHHHHHHHHHHHHhccCCCCCchhHHHHHHHHHHHHHHhcCccHHHHHHHHHhHH
Q 026544 147 DHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERLTCIFLFLSRQ 202 (237)
Q Consensus 147 ~~A~~aY~~A~~iA~~~L~pt~PirLGLaLN~SVF~yEIl~~~~~~A~~iA~~~~~ 202 (237)
+.|.+.|++|+++ .|.+|. ...|.+..|+. +++.++ |+.....+++
T Consensus 25 ~~A~~~y~~Al~~-----~p~~~~---~~~nlg~~~~~-~~~~~~-A~~~~~~al~ 70 (127)
T 4gcn_A 25 EKAHVHYDKAIEL-----DPSNIT---FYNNKAAVYFE-EKKFAE-CVQFCEKAVE 70 (127)
T ss_dssp HHHHHHHHHHHHH-----CTTCHH---HHHHHHHHHHH-TTCHHH-HHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCCHH---HHHhHHHHHHH-hhhHHH-HHHHHHHHHH
Confidence 5699999999875 466653 45567776665 699999 9987777765
No 44
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=65.40 E-value=62 Score=27.37 Aligned_cols=174 Identities=7% Similarity=-0.059 Sum_probs=88.7
Q ss_pred HHHHHHHhcCHHHHHHHHHHHhhcCCCCCH-----HHHHHHHhhhhhhccchhhHHHHHHhHhhhhhhhCc-hhHHHHH-
Q 026544 11 LARLAEQAERYDEMVEAMKKVAKLDVELTV-----EERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGN-EQNVKRI- 83 (237)
Q Consensus 11 ~AklaeqaeRy~Dm~~~mK~vi~~~~eLt~-----EERnLLSvAyKn~i~~~R~s~R~l~sieqk~e~~~~-~~~~~~i- 83 (237)
++......|+|++++.+.++.+..-....+ +=...++.+|-. .+..-.|...+....+--+..+. ......+
T Consensus 109 ~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~-~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~ 187 (383)
T 3ulq_A 109 RGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYY-MKQTYFSMDYARQAYEIYKEHEAYNIRLLQCH 187 (383)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHTTGGGCCCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHTCSTTHHHHHHHH
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHHHhCccchHHHHHHH
Confidence 788888899999999999999875333222 223344444443 33334444443211111110111 1100000
Q ss_pred ----HHHH-HHHHHHHHHHHHHHHHHhhhccCCCCCCChhHHHHHHHhcCcccchhhccCcchHHHHHHHHHHHHHHHHH
Q 026544 84 ----KEYR-QRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKAYEAATA 158 (237)
Q Consensus 84 ----~~yk-~kIe~EL~~iC~eii~lID~~Lip~~~~~eskVFy~KmKGDyyRYlaE~~~~~~~~~~~~~A~~aY~~A~~ 158 (237)
.-|. ..=-++-...+...+++..+. .++......+--.|..|.-+ |+ -+.|...|++|++
T Consensus 188 ~~lg~~~~~~g~~~~A~~~~~~al~~~~~~-----~~~~~~~~~~~~lg~~y~~~-----g~-----~~~A~~~~~~al~ 252 (383)
T 3ulq_A 188 SLFATNFLDLKQYEDAISHFQKAYSMAEAE-----KQPQLMGRTLYNIGLCKNSQ-----SQ-----YEDAIPYFKRAIA 252 (383)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHT-----TCHHHHHHHHHHHHHHHHHT-----TC-----HHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHHHHc-----CChHHHHHHHHHHHHHHHHC-----CC-----HHHHHHHHHHHHH
Confidence 0000 000122233444445444332 22333334444456555433 21 2569999999999
Q ss_pred HHhccCCCCCchhHHHHHHHHHHHHHHhcCccHHHHHHHHHhHHHH
Q 026544 159 AAASELPPTHPIRLGLALNFSVFYYEILNSPERLTCIFLFLSRQTL 204 (237)
Q Consensus 159 iA~~~L~pt~PirLGLaLN~SVF~yEIl~~~~~~A~~iA~~~~~~~ 204 (237)
+++..-. .|.......|.+.. |.-+++.++ |....+++++-+
T Consensus 253 ~~~~~~~--~~~~~~~~~~l~~~-~~~~g~~~~-A~~~~~~al~~~ 294 (383)
T 3ulq_A 253 VFEESNI--LPSLPQAYFLITQI-HYKLGKIDK-AHEYHSKGMAYS 294 (383)
T ss_dssp HHHHTTC--GGGHHHHHHHHHHH-HHHTTCHHH-HHHHHHHHHHHH
T ss_pred HHHhhcc--chhHHHHHHHHHHH-HHHCCCHHH-HHHHHHHHHHHH
Confidence 9865332 13333444455544 445699999 999888887754
No 45
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=64.75 E-value=29 Score=28.51 Aligned_cols=91 Identities=9% Similarity=-0.064 Sum_probs=51.0
Q ss_pred HHHHHhhhccCCCCCCChhH--HHHHHHhcCcccchhhccCcchHHHHHHHHHHHHHHHHHHHhccCCCCCchhHHHHHH
Q 026544 100 DILSVIDEHLIPSSTSGEST--VFYYKMKGDYYRYLAEFKGADDRKEAADHSLKAYEAATAAAASELPPTHPIRLGLALN 177 (237)
Q Consensus 100 eii~lID~~Lip~~~~~esk--VFy~KmKGDyyRYlaE~~~~~~~~~~~~~A~~aY~~A~~iA~~~L~pt~PirLGLaLN 177 (237)
+++.+++..+-.....++.+ +.|+...|.+|.. .++ .+.|...|++|+++.. +..++.....++|
T Consensus 93 ~a~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~-----~~~-----~~~Ai~~~~~al~~~~---~~~~~~~~~~~~~ 159 (293)
T 3u3w_A 93 EIYNKVWNELKKEEYHPEFQQFLQWQYYVAAYVLK-----KVD-----YEYCILELKKLLNQQL---TGIDVYQNLYIEN 159 (293)
T ss_dssp HHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHTT-----SSC-----HHHHHHHHHHHHHTCC---CCSCTTHHHHHHH
T ss_pred HHHHHHHHHhccccCChHHHHHHHHHHHHHHHHHc-----ccC-----HHHHHHHHHHHHHHhc---ccccHHHHHHHHH
Confidence 34444444333222333333 4466666776532 111 2468999999998542 2334444444444
Q ss_pred HHHHHHHHhcCccHHHHHHHHHhHHHH
Q 026544 178 FSVFYYEILNSPERLTCIFLFLSRQTL 204 (237)
Q Consensus 178 ~SVF~yEIl~~~~~~A~~iA~~~~~~~ 204 (237)
.--..|.-+++.++ |....+++++.+
T Consensus 160 ~lg~~y~~~g~~~~-A~~~~~~al~~~ 185 (293)
T 3u3w_A 160 AIANIYAENGYLKK-GIDLFEQILKQL 185 (293)
T ss_dssp HHHHHHHHTTCHHH-HHHHHHHHHHHH
T ss_pred HHHHHHHHcCCHHH-HHHHHHHHHHHH
Confidence 44444455799999 999988888643
No 46
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=63.78 E-value=32 Score=23.95 Aligned_cols=53 Identities=9% Similarity=0.068 Sum_probs=37.0
Q ss_pred HHHHHHHHHHHHHHhccCCCCCchhHH-HHHHHHHHHHHHhcCccHHHHHHHHHhHHHH
Q 026544 147 DHSLKAYEAATAAAASELPPTHPIRLG-LALNFSVFYYEILNSPERLTCIFLFLSRQTL 204 (237)
Q Consensus 147 ~~A~~aY~~A~~iA~~~L~pt~PirLG-LaLN~SVF~yEIl~~~~~~A~~iA~~~~~~~ 204 (237)
+.|...|++|++++... .+|...+ ...|.+. .|..+++.++ |....+++++-+
T Consensus 66 ~~A~~~~~~a~~~~~~~---~~~~~~~~~~~~l~~-~~~~~~~~~~-A~~~~~~a~~~~ 119 (164)
T 3ro3_A 66 ETASEYYKKTLLLARQL---KDRAVEAQSCYSLGN-TYTLLQDYEK-AIDYHLKHLAIA 119 (164)
T ss_dssp HHHHHHHHHHHHHHHHT---TCHHHHHHHHHHHHH-HHHHTTCHHH-HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHh---CCcHHHHHHHHHHHH-HHHHHhhHHH-HHHHHHHHHHHH
Confidence 56899999999998642 2333334 4445554 4455799999 999888887664
No 47
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=63.36 E-value=70 Score=27.21 Aligned_cols=58 Identities=16% Similarity=0.128 Sum_probs=38.9
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHhhcCCCCCHHHHHHHHhhhhhhccchhhHHHHHHhH
Q 026544 8 HVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSI 67 (237)
Q Consensus 8 l~~~AklaeqaeRy~Dm~~~mK~vi~~~~eLt~EERnLLSvAyKn~i~~~R~s~R~l~si 67 (237)
+..+|.+..+.|++++++..++++++.+|. +.+-...+..+|-. .+....|...+...
T Consensus 180 ~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~-~~~~~~~l~~~~~~-~g~~~~A~~~~~~~ 237 (450)
T 2y4t_A 180 RELRAECFIKEGEPRKAISDLKAASKLKND-NTEAFYKISTLYYQ-LGDHELSLSEVREC 237 (450)
T ss_dssp HHHHHHHHHHTTCGGGGHHHHHHHHHHHCS-CHHHHHHHHHHHHH-TTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHH-cCCHHHHHHHHHHH
Confidence 456788888899999999999999876554 34445555555543 35555666665433
No 48
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=62.95 E-value=57 Score=26.05 Aligned_cols=58 Identities=12% Similarity=-0.010 Sum_probs=36.2
Q ss_pred hhHHHHHHHHHHhcCHHHHHHHHHHHhhcCCCCCHHHHHHHHhhhhhhccchhhHHHHHH
Q 026544 6 EHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILS 65 (237)
Q Consensus 6 eel~~~AklaeqaeRy~Dm~~~mK~vi~~~~eLt~EERnLLSvAyKn~i~~~R~s~R~l~ 65 (237)
+.++.+|...-+.|+|++++.+.++++...|. +.+-...+..+|-. .+....|...+.
T Consensus 22 ~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~l~~~~~~-~~~~~~A~~~~~ 79 (327)
T 3cv0_A 22 ENPMEEGLSMLKLANLAEAALAFEAVCQAAPE-REEAWRSLGLTQAE-NEKDGLAIIALN 79 (327)
T ss_dssp SCHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHH-cCCHHHHHHHHH
Confidence 45677788888888888888888888876654 33444444544433 244444554443
No 49
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=62.23 E-value=70 Score=26.87 Aligned_cols=178 Identities=10% Similarity=-0.030 Sum_probs=89.9
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHhhcCCCC-----CHHHHHHHHhhhhhhccchhhHHHHHHhHhhhhhhhCchh----
Q 026544 8 HVYLARLAEQAERYDEMVEAMKKVAKLDVEL-----TVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQ---- 78 (237)
Q Consensus 8 l~~~AklaeqaeRy~Dm~~~mK~vi~~~~eL-----t~EERnLLSvAyKn~i~~~R~s~R~l~sieqk~e~~~~~~---- 78 (237)
+..++.+....|+|++++.+.++.++..... ...=...+..+|- ..+....|...+....+.....++..
T Consensus 89 ~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~~ 167 (411)
T 4a1s_A 89 YSQLGNAYFYLGDYNKAMQYHKHDLTLAKSMNDRLGEAKSSGNLGNTLK-VMGRFDEAAICCERHLTLARQLGDRLSEGR 167 (411)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHHTCHHHHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccCchHHHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHHHHHhhchHHHHH
Confidence 4567788888899999999999887652211 1222233444432 23444445444432221111111111
Q ss_pred -HHHHHHHHHHH-H-----------------HHHHHHHHHHHHHHhhhccCCCCCCChhHHHHHHHhcCcccchhhccCc
Q 026544 79 -NVKRIKEYRQR-V-----------------EDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGA 139 (237)
Q Consensus 79 -~~~~i~~yk~k-I-----------------e~EL~~iC~eii~lID~~Lip~~~~~eskVFy~KmKGDyyRYlaE~~~~ 139 (237)
...+..-|... = -++-...+.+.+++.... .++......+-..|..|... |
T Consensus 168 ~~~~l~~~~~~~g~~~~~~~~~~~~~~a~~~~~~A~~~~~~al~~~~~~-----~~~~~~~~~~~~la~~~~~~-----g 237 (411)
T 4a1s_A 168 ALYNLGNVYHAKGKHLGQRNPGKFGDDVKEALTRAVEFYQENLKLMRDL-----GDRGAQGRACGNLGNTYYLL-----G 237 (411)
T ss_dssp HHHHHHHHHHHHHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHHHHHH-----TCHHHHHHHHHHHHHHHHHT-----T
T ss_pred HHHHHHHHHHHcCcccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHc-----CCHHHHHHHHHHHHHHHHHc-----C
Confidence 00111111110 0 233344555555554332 22233444445555555432 1
Q ss_pred chHHHHHHHHHHHHHHHHHHHhccCCCCCchhHHHHHHHHHHHHHHhcCccHHHHHHHHHhHHHHH
Q 026544 140 DDRKEAADHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERLTCIFLFLSRQTLI 205 (237)
Q Consensus 140 ~~~~~~~~~A~~aY~~A~~iA~~~L~pt~PirLGLaLN~SVF~yEIl~~~~~~A~~iA~~~~~~~i 205 (237)
+ .+.|...|++|+++.... .++...+.+++.-...|.-+++.++ |....+++++...
T Consensus 238 ~-----~~~A~~~~~~al~~~~~~---~~~~~~~~~~~~la~~~~~~g~~~~-A~~~~~~al~~~~ 294 (411)
T 4a1s_A 238 D-----FQAAIEHHQERLRIAREF---GDRAAERRANSNLGNSHIFLGQFED-AAEHYKRTLALAV 294 (411)
T ss_dssp C-----HHHHHHHHHHHHHHHHHH---TCHHHHHHHHHHHHHHHHTTTCHHH-HHHHHHHHHHHHH
T ss_pred C-----hHHHHHHHHHHHHHHHhc---CCcHHHHHHHHHHHHHHHHCcCHHH-HHHHHHHHHHHHH
Confidence 1 245888899998887542 2334444454444555666788888 8888777776543
No 50
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=59.14 E-value=98 Score=27.53 Aligned_cols=55 Identities=7% Similarity=-0.055 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCchhHHHHHHHHHHHHHHhcCccHHHHHHHHHhHHH
Q 026544 146 ADHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERLTCIFLFLSRQT 203 (237)
Q Consensus 146 ~~~A~~aY~~A~~iA~~~L~pt~PirLGLaLN~SVF~yEIl~~~~~~A~~iA~~~~~~ 203 (237)
.+.|.+.|++|.++... . +.+|-....+++.-.-.|...++.++ |....+++++.
T Consensus 491 ~~~A~~~~~~~~~~~~~-~-~~~p~~~~~~~~~l~~~~~~~g~~~~-A~~~~~~~~~~ 545 (597)
T 2xpi_A 491 MQTAINHFQNALLLVKK-T-QSNEKPWAATWANLGHAYRKLKMYDA-AIDALNQGLLL 545 (597)
T ss_dssp HHHHHHHHHHHHHHHHH-S-CCCSGGGHHHHHHHHHHHHHTTCHHH-HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhc-c-ccchhhHHHHHHHHHHHHHHhcCHHH-HHHHHHHHHHh
Confidence 35689999999887643 2 34565544444444555666899999 99988877653
No 51
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=59.11 E-value=91 Score=27.15 Aligned_cols=49 Identities=8% Similarity=0.023 Sum_probs=32.1
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCchhHHHHHHHHHHHHHHhcCccHHHHHHHHHhHHHH
Q 026544 146 ADHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERLTCIFLFLSRQTL 204 (237)
Q Consensus 146 ~~~A~~aY~~A~~iA~~~L~pt~PirLGLaLN~SVF~yEIl~~~~~~A~~iA~~~~~~~ 204 (237)
.+.|...|++|+++ .|.+| ....+.+.. |.-+++.++ |....+.+++-.
T Consensus 444 ~~~A~~~~~~a~~~-----~p~~~---~~~~~l~~~-~~~~g~~~~-A~~~~~~al~~~ 492 (537)
T 3fp2_A 444 FNAAIKLLTKACEL-----DPRSE---QAKIGLAQL-KLQMEKIDE-AIELFEDSAILA 492 (537)
T ss_dssp HHHHHHHHHHHHHH-----CTTCH---HHHHHHHHH-HHHTTCHHH-HHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHh-----CCCCH---HHHHHHHHH-HHHhccHHH-HHHHHHHHHHhC
Confidence 35677888888764 45555 333444444 456799999 998877776643
No 52
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=58.81 E-value=70 Score=25.75 Aligned_cols=167 Identities=14% Similarity=0.061 Sum_probs=84.6
Q ss_pred HHHHHHHHHhcCHHHHHHHHHHHhhcCCCCCHHHHHHHHhhhhhhccchhhHHHHHHhHhhhhhhhCch-hHHHHHHHHH
Q 026544 9 VYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNE-QNVKRIKEYR 87 (237)
Q Consensus 9 ~~~AklaeqaeRy~Dm~~~mK~vi~~~~eLt~EERnLLSvAyKn~i~~~R~s~R~l~sieqk~e~~~~~-~~~~~i~~yk 87 (237)
..+|.+..+.|+|++++..++++++.+|. +.+-...++.+|-. .+....|...+....+... .+. .......-|.
T Consensus 124 ~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~A~~~~~~~~~~~~--~~~~~~~~la~~~~ 199 (359)
T 3ieg_A 124 RSQALDAFDGADYTAAITFLDKILEVCVW-DAELRELRAECFIK-EGEPRKAISDLKAASKLKS--DNTEAFYKISTLYY 199 (359)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHH-TTCHHHHHHHHHHHHTTCS--CCHHHHHHHHHHHH
T ss_pred HHHHHHHHHccCHHHHHHHHHHHHHhCCC-chHHHHHHHHHHHH-CCCHHHHHHHHHHHHHhCC--CCHHHHHHHHHHHH
Confidence 44578889999999999999999987664 34555555555543 3555566666543332211 111 1111111111
Q ss_pred H-HHHHHHHHHHHHHHHHhhhccCCCCCCChhHHHHHHHh--------cCcccchhhccCcchHHHHHHHHHHHHHHHHH
Q 026544 88 Q-RVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMK--------GDYYRYLAEFKGADDRKEAADHSLKAYEAATA 158 (237)
Q Consensus 88 ~-kIe~EL~~iC~eii~lID~~Lip~~~~~eskVFy~KmK--------GDyyRYlaE~~~~~~~~~~~~~A~~aY~~A~~ 158 (237)
. .=-++-...+..++++ -|. ++....+|.++. |..+. ..|+ .+.|...|+++.+
T Consensus 200 ~~~~~~~A~~~~~~a~~~-----~~~--~~~~~~~~~~~~~~~~~~~~a~~~~-----~~~~-----~~~A~~~~~~~~~ 262 (359)
T 3ieg_A 200 QLGDHELSLSEVRECLKL-----DQD--HKRCFAHYKQVKKLNKLIESAEELI-----RDGR-----YTDATSKYESVMK 262 (359)
T ss_dssp HHTCHHHHHHHHHHHHHH-----CTT--CHHHHHHHHHHHHHHHHHHHHHHHH-----HTTC-----HHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHhh-----Ccc--chHHHHHHHHHHHHHHHHHHHHHHH-----HcCC-----HHHHHHHHHHHHh
Confidence 0 0011222222232221 122 222223332221 22221 1111 2458888888876
Q ss_pred HHhccCCCCCchhHH-HHHHHHHHHHHHhcCccHHHHHHHHHhHHH
Q 026544 159 AAASELPPTHPIRLG-LALNFSVFYYEILNSPERLTCIFLFLSRQT 203 (237)
Q Consensus 159 iA~~~L~pt~PirLG-LaLN~SVF~yEIl~~~~~~A~~iA~~~~~~ 203 (237)
. .|.+|.... +..+.+..+ .-+++.++ |+.....+++.
T Consensus 263 ~-----~~~~~~~~~~~~~~la~~~-~~~~~~~~-A~~~~~~~~~~ 301 (359)
T 3ieg_A 263 T-----EPSVAEYTVRSKERICHCF-SKDEKPVE-AIRICSEVLQM 301 (359)
T ss_dssp H-----CCSSHHHHHHHHHHHHHHH-HHTTCHHH-HHHHHHHHHHH
T ss_pred c-----CCCchHHHHHHHHHHHHHH-HHccCHHH-HHHHHHHHHHh
Confidence 4 355665443 344455444 45799999 99988877764
No 53
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=58.64 E-value=92 Score=27.10 Aligned_cols=55 Identities=15% Similarity=0.030 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHHHhc--cCCCCCch---hHHHHHHHHHHHHHHhcCccHHHHHHHHHhHHH
Q 026544 148 HSLKAYEAATAAAAS--ELPPTHPI---RLGLALNFSVFYYEILNSPERLTCIFLFLSRQT 203 (237)
Q Consensus 148 ~A~~aY~~A~~iA~~--~L~pt~Pi---rLGLaLN~SVF~yEIl~~~~~~A~~iA~~~~~~ 203 (237)
.+...|.+|....++ ...|.+|- .++.++..--..|.-.++.++ |....+.+.+.
T Consensus 213 ~a~~~~~~A~~~~~~~l~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~-A~~~~~~~~~~ 272 (537)
T 3fp2_A 213 VANDLLTKSTDMYHSLLSANTVDDPLRENAALALCYTGIFHFLKNNLLD-AQVLLQESINL 272 (537)
T ss_dssp HHHHHHHHHHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHTTCHHH-HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHCCCcchhhHHHHHHHHHHHHHHHhcccHHH-HHHHHHHHHhc
Confidence 344456666555432 45666653 345566666667777899999 99887777653
No 54
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=58.02 E-value=12 Score=26.61 Aligned_cols=31 Identities=10% Similarity=0.018 Sum_probs=24.6
Q ss_pred hHHHHHHHHHHhcCHHHHHHHHHHHhhcCCC
Q 026544 7 HHVYLARLAEQAERYDEMVEAMKKVAKLDVE 37 (237)
Q Consensus 7 el~~~AklaeqaeRy~Dm~~~mK~vi~~~~e 37 (237)
-++.++.++.+.|+|++++.+..++.+.+|+
T Consensus 45 A~~~lg~~~~~~g~y~~Ai~~w~~~l~~~p~ 75 (93)
T 3bee_A 45 ALSLIANDHFISFRFQEAIDTWVLLLDSNDP 75 (93)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHTCCCT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC
Confidence 4567788888888888888888888877766
No 55
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=57.65 E-value=14 Score=27.46 Aligned_cols=55 Identities=15% Similarity=0.098 Sum_probs=40.7
Q ss_pred HHHHHHHHHHHHHHhcc---CCCC-------CchhHHHHHHHHHHHHHHhcCccHHHHHHHHHhHHH
Q 026544 147 DHSLKAYEAATAAAASE---LPPT-------HPIRLGLALNFSVFYYEILNSPERLTCIFLFLSRQT 203 (237)
Q Consensus 147 ~~A~~aY~~A~~iA~~~---L~pt-------~PirLGLaLN~SVF~yEIl~~~~~~A~~iA~~~~~~ 203 (237)
+.|...|++|+++.... -.|+ +|....+..|.+..++. +++.++ |+..+..+++-
T Consensus 28 ~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~-~~~~~~-A~~~~~~al~~ 92 (162)
T 3rkv_A 28 KEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLN-IGDLHE-AEETSSEVLKR 92 (162)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHH-HTCHHH-HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHh-cCcHHH-HHHHHHHHHhc
Confidence 46999999999986431 1233 67777888888877665 589999 99887777653
No 56
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=57.11 E-value=34 Score=25.50 Aligned_cols=75 Identities=11% Similarity=-0.070 Sum_probs=49.1
Q ss_pred hhHHHHHHHhcCcccchhhccCcchHHHHHHHHHHHHHHHHHHHhccCCCCCchhHHHHHHHHHHHHHHhcCccHHHHHH
Q 026544 117 ESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERLTCIF 196 (237)
Q Consensus 117 eskVFy~KmKGDyyRYlaE~~~~~~~~~~~~~A~~aY~~A~~iA~~~L~pt~PirLGLaLN~SVF~yEIl~~~~~~A~~i 196 (237)
......+-..|..|...-+ .+.|...|++|+++++ ..+ .+|...+.+++.--..|--+++.++ |...
T Consensus 63 ~~~~~~~~~l~~~~~~~g~----------~~~A~~~~~~al~~~~-~~~-~~~~~~~~~~~~lg~~~~~~g~~~~-A~~~ 129 (203)
T 3gw4_A 63 TAEHRALHQVGMVERMAGN----------WDAARRCFLEERELLA-SLP-EDPLAASANAYEVATVALHFGDLAG-ARQE 129 (203)
T ss_dssp HHHHHHHHHHHHHHHHTTC----------HHHHHHHHHHHHHHHH-HSC-CCHHHHHHHHHHHHHHHHHHTCHHH-HHHH
T ss_pred HHHHHHHHHHHHHHHHcCC----------HHHHHHHHHHHHHHHH-HcC-ccHHHHHHHHHHHHHHHHHhCCHHH-HHHH
Confidence 3445555556665554311 2569999999999986 333 3464555555555555556899999 9998
Q ss_pred HHHhHHHH
Q 026544 197 LFLSRQTL 204 (237)
Q Consensus 197 A~~~~~~~ 204 (237)
.+++++-+
T Consensus 130 ~~~al~~~ 137 (203)
T 3gw4_A 130 YEKSLVYA 137 (203)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 88887654
No 57
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=55.17 E-value=86 Score=25.67 Aligned_cols=58 Identities=9% Similarity=-0.036 Sum_probs=39.7
Q ss_pred hhHHHHHHHHHHhcCHHHHHHHHHHHhhcCCCCCHHHHHHHHhhhhhhccchhhHHHHHH
Q 026544 6 EHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILS 65 (237)
Q Consensus 6 eel~~~AklaeqaeRy~Dm~~~mK~vi~~~~eLt~EERnLLSvAyKn~i~~~R~s~R~l~ 65 (237)
+.+..+|....+.|+|++++.+++++++.+|. +.+-...+..+|.. .+....|...+.
T Consensus 65 ~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~-~g~~~~A~~~~~ 122 (368)
T 1fch_A 65 PQPFEEGLRRLQEGDLPNAVLLFEAAVQQDPK-HMEAWQYLGTTQAE-NEQELLAISALR 122 (368)
T ss_dssp SSHHHHHHHHHHTTCHHHHHHHHHHHHHSCTT-CHHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHH-CcCHHHHHHHHH
Confidence 35778999999999999999999999987665 34444555555543 244444444443
No 58
>4gfq_A Ribosome-recycling factor; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.65A {Bacillus anthracis}
Probab=54.75 E-value=19 Score=30.56 Aligned_cols=69 Identities=17% Similarity=0.148 Sum_probs=45.9
Q ss_pred CCCCHHHHHHHHhhhhhhccchhhHHHHHHhHhh----hhhhhCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 026544 36 VELTVEERNLVSVGYKNVIGARRASWRILSSIEQ----KEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHL 109 (237)
Q Consensus 36 ~eLt~EERnLLSvAyKn~i~~~R~s~R~l~sieq----k~e~~~~~~~~~~i~~yk~kIe~EL~~iC~eii~lID~~L 109 (237)
|+||.|-|.=|....|...-.-|.|.|.+..--. +.+..+ .+-++-.++.++|+..+.++.+.-||..+
T Consensus 127 P~LTeErRkelvK~ak~~~E~aKvaIRniRrda~~~lKk~~K~~-----~isEDe~k~~e~eiQklTd~~i~~iD~~l 199 (209)
T 4gfq_A 127 PALTEERRRDLVKVVKKYAEEAKVAVRNVRRDGNDDLKKLEKAG-----EITEDDLRGYTEDIQKETDKYIAKVDEIA 199 (209)
T ss_dssp CBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-----SSCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccC-----CCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8899999999999999988888888888742110 111011 01134445677777777777777777654
No 59
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=53.62 E-value=1.6e+02 Score=28.76 Aligned_cols=168 Identities=10% Similarity=0.058 Sum_probs=87.2
Q ss_pred hhHHHHHHHHHHhcCHHHHHHHHHHHhhcCCCCCHHHHHHHHhhhhhhccchhhHHHHHHh-HhhhhhhhCchhHHHHHH
Q 026544 6 EHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSS-IEQKEEAKGNEQNVKRIK 84 (237)
Q Consensus 6 eel~~~AklaeqaeRy~Dm~~~mK~vi~~~~eLt~EERnLLSvAyKn~i~~~R~s~R~l~s-ieqk~e~~~~~~~~~~i~ 84 (237)
+-+..++.+..+.|+|++++.+.+++++.+|+. .+=.+-|..+|.. .+..-.|...+.. ++-+.. ..+....+-.
T Consensus 10 ~al~nLG~~~~~~G~~~eAi~~~~kAl~l~P~~-~~a~~nLg~~l~~-~g~~~eA~~~~~~Al~l~P~--~~~a~~nLg~ 85 (723)
T 4gyw_A 10 DSLNNLANIKREQGNIEEAVRLYRKALEVFPEF-AAAHSNLASVLQQ-QGKLQEALMHYKEAIRISPT--FADAYSNMGN 85 (723)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCC-HHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTT--CHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC-HHHHHHHHHHHHH-cCCHHHHHHHHHHHHHhCCC--CHHHHHHHHH
Confidence 345678899999999999999999999988775 3444555666554 2444444444421 221111 0001111111
Q ss_pred HHH--HHHHHHHHHHHHHHHHHhhhccCCCCCCChhHHHHHHHhcCcccchhhccCcchHHHHHHHHHHHHHHHHHHHhc
Q 026544 85 EYR--QRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKAYEAATAAAAS 162 (237)
Q Consensus 85 ~yk--~kIe~EL~~iC~eii~lID~~Lip~~~~~eskVFy~KmKGDyyRYlaE~~~~~~~~~~~~~A~~aY~~A~~iA~~ 162 (237)
-|. .+. +|-...++..+++ -|.. ..+ +-..|..|+-+ |+ .+.|.++|++|+++
T Consensus 86 ~l~~~g~~-~~A~~~~~kAl~l-----~P~~----~~a--~~~Lg~~~~~~-----g~-----~~eAi~~~~~Al~l--- 140 (723)
T 4gyw_A 86 TLKEMQDV-QGALQCYTRAIQI-----NPAF----ADA--HSNLASIHKDS-----GN-----IPEAIASYRTALKL--- 140 (723)
T ss_dssp HHHHTTCH-HHHHHHHHHHHHH-----CTTC----HHH--HHHHHHHHHHT-----TC-----HHHHHHHHHHHHHH---
T ss_pred HHHHcCCH-HHHHHHHHHHHHh-----CCCC----HHH--HHHHHHHHHHc-----CC-----HHHHHHHHHHHHHh---
Confidence 110 001 1112222333322 1321 111 12223333211 11 35699999999875
Q ss_pred cCCCCCchhHHHHHHHHHHHHHHhcCccHHHHHHHHHhHHHHHHhhh
Q 026544 163 ELPPTHPIRLGLALNFSVFYYEILNSPERLTCIFLFLSRQTLIVVIK 209 (237)
Q Consensus 163 ~L~pt~PirLGLaLN~SVF~yEIl~~~~~~A~~iA~~~~~~~i~~~~ 209 (237)
.|.+|- ...|. ...|..+++-++ |.+..+.+++-.-..++
T Consensus 141 --~P~~~~---a~~~L-~~~l~~~g~~~~-A~~~~~kal~l~~~~~~ 180 (723)
T 4gyw_A 141 --KPDFPD---AYCNL-AHCLQIVCDWTD-YDERMKKLVSIVADQLE 180 (723)
T ss_dssp --CSCCHH---HHHHH-HHHHHHTTCCTT-HHHHHHHHHHHHHHHHH
T ss_pred --CCCChH---HHhhh-hhHHHhcccHHH-HHHHHHHHHHhChhHHh
Confidence 456543 23344 345667799999 98887777766655543
No 60
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=52.12 E-value=1.1e+02 Score=26.17 Aligned_cols=171 Identities=9% Similarity=-0.076 Sum_probs=78.4
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHhhcCCCCCHHHHHHHHhhhhhhccchhhHHHHHHhHhhhhhhhCchhHHHHHHHHH
Q 026544 8 HVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYR 87 (237)
Q Consensus 8 l~~~AklaeqaeRy~Dm~~~mK~vi~~~~eLt~EERnLLSvAyKn~i~~~R~s~R~l~sieqk~e~~~~~~~~~~i~~yk 87 (237)
+..++.+..+.|++++++.+++++++.+|.-. +-...+..+|-. .+....+...+....+.... ..........-|.
T Consensus 307 ~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~-~~~~~l~~~~~~-~~~~~~A~~~~~~~~~~~~~-~~~~~~~la~~~~ 383 (514)
T 2gw1_A 307 YYHRGQMNFILQNYDQAGKDFDKAKELDPENI-FPYIQLACLAYR-ENKFDDCETLFSEAKRKFPE-APEVPNFFAEILT 383 (514)
T ss_dssp HHHHHHHHHHTTCTTHHHHHHHHHHHTCSSCS-HHHHHHHHHTTT-TTCHHHHHHHHHHHHHHSTT-CSHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHhChhhH-HHHHHHHHHHHH-cCCHHHHHHHHHHHHHHccc-CHHHHHHHHHHHH
Confidence 45677777788888888888888887766532 233333333322 34445555555433222110 0111111111110
Q ss_pred -HHHHHHHHHHHHHHHHHhhhccCCCCCCChhHHHHHHHhcCcccchhhccCcchHHHHHHHHHHHHHHHHHHHhccCCC
Q 026544 88 -QRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKAYEAATAAAASELPP 166 (237)
Q Consensus 88 -~kIe~EL~~iC~eii~lID~~Lip~~~~~eskVFy~KmKGDyyRYlaE~~~~~~~~~~~~~A~~aY~~A~~iA~~~L~p 166 (237)
..=-++-......++.+- |........+..+-..|..|.... ..| -.+.|...|++|+++ .|
T Consensus 384 ~~~~~~~A~~~~~~a~~~~-----~~~~~~~~~~~~~~~l~~~~~~~~--~~~-----~~~~A~~~~~~a~~~-----~~ 446 (514)
T 2gw1_A 384 DKNDFDKALKQYDLAIELE-----NKLDGIYVGIAPLVGKATLLTRNP--TVE-----NFIEATNLLEKASKL-----DP 446 (514)
T ss_dssp HTTCHHHHHHHHHHHHHHH-----HTSSSCSSCSHHHHHHHHHHHTSC--CTT-----HHHHHHHHHHHHHHH-----CT
T ss_pred HCCCHHHHHHHHHHHHHhh-----hccchHHHHHHHHHHHHHHHhhhh--hcC-----CHHHHHHHHHHHHHh-----Cc
Confidence 011122223333333322 221111111112222333222100 012 135688888888764 34
Q ss_pred CCchhHHHHHHHHHHHHHHhcCccHHHHHHHHHhHHH
Q 026544 167 THPIRLGLALNFSVFYYEILNSPERLTCIFLFLSRQT 203 (237)
Q Consensus 167 t~PirLGLaLN~SVF~yEIl~~~~~~A~~iA~~~~~~ 203 (237)
.+| ....+.+. .|.-+++.++ |....+++++.
T Consensus 447 ~~~---~~~~~la~-~~~~~g~~~~-A~~~~~~a~~~ 478 (514)
T 2gw1_A 447 RSE---QAKIGLAQ-MKLQQEDIDE-AITLFEESADL 478 (514)
T ss_dssp TCH---HHHHHHHH-HHHHTTCHHH-HHHHHHHHHHH
T ss_pred ccH---HHHHHHHH-HHHHhcCHHH-HHHHHHHHHHh
Confidence 444 22334433 3456799999 98887777664
No 61
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=51.63 E-value=1e+02 Score=25.46 Aligned_cols=58 Identities=9% Similarity=-0.068 Sum_probs=41.3
Q ss_pred hhHHHHHHHHHHhcCHHHHHHHHHHHhhcCCCCCHHHHHHHHhhhhhhccchhhHHHHHH
Q 026544 6 EHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILS 65 (237)
Q Consensus 6 eel~~~AklaeqaeRy~Dm~~~mK~vi~~~~eLt~EERnLLSvAyKn~i~~~R~s~R~l~ 65 (237)
+.++.+|....+.|+|++++.+.++++..+|.- .+-...+..+|-. .+....|...+.
T Consensus 66 ~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~-~~~~~~lg~~~~~-~g~~~~A~~~~~ 123 (365)
T 4eqf_A 66 PGAFEEGLKRLKEGDLPVTILFMEAAILQDPGD-AEAWQFLGITQAE-NENEQAAIVALQ 123 (365)
T ss_dssp TTHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred hHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcCC-HHHHHHHHHHHHH-CCCHHHHHHHHH
Confidence 347888999999999999999999999876653 4455555655543 345555555554
No 62
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=51.62 E-value=35 Score=23.04 Aligned_cols=53 Identities=11% Similarity=-0.044 Sum_probs=36.8
Q ss_pred HHHHHHHHHHHHHHhccCCCCCchhHHHHHHHHHHHHHHhcCccHHHHHHHHHhHH
Q 026544 147 DHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERLTCIFLFLSRQ 202 (237)
Q Consensus 147 ~~A~~aY~~A~~iA~~~L~pt~PirLGLaLN~SVF~yEIl~~~~~~A~~iA~~~~~ 202 (237)
+.|...|++|+++.. ..++.+|.......+.+..++ -+++.++ |......+++
T Consensus 55 ~~A~~~~~~~~~~~~-~~~~~~~~~~~~~~~la~~~~-~~~~~~~-A~~~~~~~~~ 107 (131)
T 1elr_A 55 NKCRELCEKAIEVGR-ENREDYRQIAKAYARIGNSYF-KEEKYKD-AIHFYNKSLA 107 (131)
T ss_dssp HHHHHHHHHHHHHHH-HSTTCHHHHHHHHHHHHHHHH-HTTCHHH-HHHHHHHHHH
T ss_pred HHHHHHHHHHHhhcc-ccchhHHHHHHHHHHHHHHHH-HhccHHH-HHHHHHHHHH
Confidence 468899999998874 344555544555666666655 4699999 8887666655
No 63
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=51.10 E-value=35 Score=24.58 Aligned_cols=52 Identities=12% Similarity=0.059 Sum_probs=35.4
Q ss_pred HHHHHHHHHHHHHHhccCCCCCchhHHHH-HHHHHHHHHHhcCccHHHHHHHHHhHH
Q 026544 147 DHSLKAYEAATAAAASELPPTHPIRLGLA-LNFSVFYYEILNSPERLTCIFLFLSRQ 202 (237)
Q Consensus 147 ~~A~~aY~~A~~iA~~~L~pt~PirLGLa-LN~SVF~yEIl~~~~~~A~~iA~~~~~ 202 (237)
+.|.+.|++|+++.. +.++.++. +|-+ .|.+. .|+-+++.++ |++.-+.++.
T Consensus 59 ~~A~~~~~~al~~~~-~~~~~~~~-~a~~~~~lg~-~~~~~~~~~~-A~~~~~kal~ 111 (127)
T 4gcn_A 59 AECVQFCEKAVEVGR-ETRADYKL-IAKAMSRAGN-AFQKQNDLSL-AVQWFHRSLS 111 (127)
T ss_dssp HHHHHHHHHHHHHHH-HTTCCHHH-HHHHHHHHHH-HHHHTTCHHH-HHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCc-ccchhhHH-HHHHHHHHHH-HHHHcCCHHH-HHHHHHHHHh
Confidence 569999999999875 34445444 4433 44444 4566799999 9987666654
No 64
>1ge9_A Ribosome recycling factor; three-helix bundle; NMR {Aquifex aeolicus} SCOP: d.67.3.1
Probab=50.99 E-value=35 Score=28.23 Aligned_cols=70 Identities=14% Similarity=0.152 Sum_probs=47.1
Q ss_pred CCCCHHHHHHHHhhhhhhccchhhHHHHHHhHhhhhhhhCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 026544 36 VELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHL 109 (237)
Q Consensus 36 ~eLt~EERnLLSvAyKn~i~~~R~s~R~l~sieqk~e~~~~~~~~~~i~~yk~kIe~EL~~iC~eii~lID~~L 109 (237)
|+||.|-|.=|....|...-.-|.|.|.+..--.+.-.+.. + .-++-..+.++|+..+.+..+.-||..+
T Consensus 105 P~lTeErRkelvK~~k~~~E~aKvaiRniRrda~~~lKk~~--k--iseD~~k~~e~~iQkltd~~i~~id~~~ 174 (184)
T 1ge9_A 105 PPLTEERRRELVRLLHKITEEARVRVRNVRREAKEMIEELE--G--ISEDEKKRALERLQKLTDKYIDEINKLM 174 (184)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHST--T--CCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--C--CChhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 78999999999999999888888888887421111111110 0 2244555677788887777777777654
No 65
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=50.22 E-value=57 Score=22.19 Aligned_cols=56 Identities=7% Similarity=0.056 Sum_probs=39.4
Q ss_pred hHHHHHHHHHHhcCHHHHHHHHHHHhhcCCCCCHHHHHHHHhhhhhhccchhhHHHHH
Q 026544 7 HHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRIL 64 (237)
Q Consensus 7 el~~~AklaeqaeRy~Dm~~~mK~vi~~~~eLt~EERnLLSvAyKn~i~~~R~s~R~l 64 (237)
-+..+|.+..+.|+|++++.+++++++.+|.... =...+..+|.. .+..-.|...+
T Consensus 9 ~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~-a~~~lg~~~~~-~g~~~~A~~~~ 64 (100)
T 3ma5_A 9 TRYALAQEHLKHDNASRALALFEELVETDPDYVG-TYYHLGKLYER-LDRTDDAIDTY 64 (100)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTH-HHHHHHHHHHH-TTCHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHH-HHHHHHHHHHH-cCCHHHHHHHH
Confidence 4567889999999999999999999998877443 44555666644 34444444444
No 66
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=49.89 E-value=38 Score=24.44 Aligned_cols=46 Identities=15% Similarity=0.046 Sum_probs=30.5
Q ss_pred HHHHHHHHHHHHHHhccCCCCCchhHHHHHHHHHHHHHHhcCccHHHHHHHHHhHH
Q 026544 147 DHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERLTCIFLFLSRQ 202 (237)
Q Consensus 147 ~~A~~aY~~A~~iA~~~L~pt~PirLGLaLN~SVF~yEIl~~~~~~A~~iA~~~~~ 202 (237)
+.|.+.|++|+++ .|.+| .+..|.+..++. +++.++ |+.....+++
T Consensus 30 ~~A~~~~~~al~~-----~p~~~---~~~~~~~~~~~~-~~~~~~-A~~~~~~al~ 75 (126)
T 4gco_A 30 PTAMRHYNEAVKR-----DPENA---ILYSNRAACLTK-LMEFQR-ALDDCDTCIR 75 (126)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHH-HHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCCH---HHHHHHhhHHHh-hccHHH-HHHHHHHHHH
Confidence 4688889888764 45554 344556555554 588889 8887666654
No 67
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=48.99 E-value=86 Score=23.88 Aligned_cols=30 Identities=10% Similarity=0.117 Sum_probs=19.6
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHhhcCCC
Q 026544 8 HVYLARLAEQAERYDEMVEAMKKVAKLDVE 37 (237)
Q Consensus 8 l~~~AklaeqaeRy~Dm~~~mK~vi~~~~e 37 (237)
+..+|.+..+.|+|++++.+..++++..|.
T Consensus 41 ~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~ 70 (258)
T 3uq3_A 41 LNNRAAAEYEKGEYETAISTLNDAVEQGRE 70 (258)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcccHHHHHHHHHHHHHhCcc
Confidence 345666666677777777777777665443
No 68
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=48.50 E-value=30 Score=29.91 Aligned_cols=53 Identities=15% Similarity=0.162 Sum_probs=38.6
Q ss_pred HHHHHHHHHHHHHHhcc-CCCCCchhHHHHHHHHHHHHHHhcCccHHHHHHHHHhH
Q 026544 147 DHSLKAYEAATAAAASE-LPPTHPIRLGLALNFSVFYYEILNSPERLTCIFLFLSR 201 (237)
Q Consensus 147 ~~A~~aY~~A~~iA~~~-L~pt~PirLGLaLN~SVF~yEIl~~~~~~A~~iA~~~~ 201 (237)
+.|.+.|++|+++.+.. ....||-.+...-|.+.-|+. +++.++ |....+.+.
T Consensus 68 ~eAl~~~~kAl~~~~~~~~~~~~~~~~~~~~nla~~y~~-~g~~~~-A~~~~~ka~ 121 (472)
T 4g1t_A 68 EAALECLRKAEELIQQEHADQAEIRSLVTWGNYAWVYYH-MGRLSD-VQIYVDKVK 121 (472)
T ss_dssp HHHHHHHHHHHHHHHHHSGGGCTTTTHHHHHHHHHHHHH-TTCHHH-HHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCccccchHHHHHHHHHHHHHHH-cCChHH-HHHHHHHHH
Confidence 46999999999998653 345677777667787776665 688888 877655544
No 69
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=48.43 E-value=39 Score=25.04 Aligned_cols=30 Identities=20% Similarity=0.275 Sum_probs=26.7
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHhhcCCC
Q 026544 8 HVYLARLAEQAERYDEMVEAMKKVAKLDVE 37 (237)
Q Consensus 8 l~~~AklaeqaeRy~Dm~~~mK~vi~~~~e 37 (237)
...+|++..+.|+|++++++.+++++.+|.
T Consensus 34 ~~~la~~y~~~~~~~~A~~~~~~al~~~p~ 63 (150)
T 4ga2_A 34 GFYFAKLYYEAKEYDLAKKYICTYINVQER 63 (150)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Confidence 467899999999999999999999988765
No 70
>1dd5_A Ribosome recycling factor; three-helix bundle, beta-alpha-beta sandwich; 2.55A {Thermotoga maritima} SCOP: d.67.3.1 PDB: 1t1m_C
Probab=47.52 E-value=30 Score=28.66 Aligned_cols=69 Identities=17% Similarity=0.272 Sum_probs=45.5
Q ss_pred CCCCHHHHHHHHhhhhhhccchhhHHHHHHhHhh----hhhhhCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 026544 36 VELTVEERNLVSVGYKNVIGARRASWRILSSIEQ----KEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHL 109 (237)
Q Consensus 36 ~eLt~EERnLLSvAyKn~i~~~R~s~R~l~sieq----k~e~~~~~~~~~~i~~yk~kIe~EL~~iC~eii~lID~~L 109 (237)
|+||.|-|.=|....|...-.-|.+.|.+..--. +.+..+ ..-++-..+.++|+..+.+..+.-||..+
T Consensus 103 P~lTeErRkelvK~~k~~~E~aKvaiRniRrda~~~lKk~~K~~-----~iseD~~k~~e~~iQkltd~~i~~id~~~ 175 (185)
T 1dd5_A 103 PSPTTEQREKWVKKAKEIVEEGKIAIRNIRREILKKIKEDQKEG-----LIPEDDAKRLENEIQKLTDEFIEKLDEVF 175 (185)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-----SSCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC-----CCChhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7899999999999999988888888888742111 111001 01234445677777777777777777654
No 71
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=47.07 E-value=66 Score=21.97 Aligned_cols=57 Identities=11% Similarity=0.184 Sum_probs=40.3
Q ss_pred hHHHHHHHHHHhcCHHHHHHHHHHHhhcCCCCCHHHHHHHHhhhhhhccchhhHHHHHH
Q 026544 7 HHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILS 65 (237)
Q Consensus 7 el~~~AklaeqaeRy~Dm~~~mK~vi~~~~eLt~EERnLLSvAyKn~i~~~R~s~R~l~ 65 (237)
-+..+|.+..+.|+|++++.++++++..+|.. .+-...+..+|.. .+....|...+.
T Consensus 21 ~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~-~~~~~~la~~~~~-~g~~~~A~~~~~ 77 (115)
T 2kat_A 21 LRFTLGKTYAEHEQFDAALPHLRAALDFDPTY-SVAWKWLGKTLQG-QGDRAGARQAWE 77 (115)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHH-HTCHHHHHHHHH
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHHHCCCc-HHHHHHHHHHHHH-cCCHHHHHHHHH
Confidence 35578888889999999999999999887654 3445556666654 355555555554
No 72
>1lyp_A CAP18; lipopolysaccharide-binding protein; NMR {Oryctolagus cuniculus} SCOP: j.17.1.1
Probab=46.91 E-value=42 Score=19.66 Aligned_cols=27 Identities=26% Similarity=0.666 Sum_probs=22.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 026544 81 KRIKEYRQRVEDELAKICNDILSVIDE 107 (237)
Q Consensus 81 ~~i~~yk~kIe~EL~~iC~eii~lID~ 107 (237)
+.+..|+.+|.+.|..+-+.|-.++.+
T Consensus 4 krlrkfrnkikeklkkigqkiqgllpk 30 (32)
T 1lyp_A 4 KRLRKFRNKIKEKLKKIGQKIQGLLPK 30 (32)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 467889999999999999888777653
No 73
>1ise_A Ribosome recycling factor; translation; 2.20A {Escherichia coli} SCOP: d.67.3.1 PDB: 1ek8_A* 1zn0_A 1zn1_A 2rdo_8
Probab=46.46 E-value=26 Score=29.06 Aligned_cols=69 Identities=16% Similarity=0.152 Sum_probs=45.0
Q ss_pred CCCCHHHHHHHHhhhhhhccchhhHHHHHHhHhh----hhhhhCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 026544 36 VELTVEERNLVSVGYKNVIGARRASWRILSSIEQ----KEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHL 109 (237)
Q Consensus 36 ~eLt~EERnLLSvAyKn~i~~~R~s~R~l~sieq----k~e~~~~~~~~~~i~~yk~kIe~EL~~iC~eii~lID~~L 109 (237)
|+||.|-|.=|....|...-.-|.+.|.+..--. +.+..+ .+-++-..+.++|+..+.+..+.-||..+
T Consensus 103 P~lTeErRkelvK~~k~~~E~aKvaiRniRrda~~~lKk~~K~~-----~iseD~~k~~e~~iQkltd~~i~~id~~~ 175 (185)
T 1ise_A 103 PPLTEERRKDLTKIVRGEAEQARVAVRNVGRDANDKVKALLKDK-----EISEDDDRRSQDDVQKLTDAAIKKIEAAL 175 (185)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-----SSCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC-----CCChhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7899999999999999988888888888732110 111111 01234445667777777777777777644
No 74
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=46.39 E-value=94 Score=23.55 Aligned_cols=57 Identities=11% Similarity=0.064 Sum_probs=35.3
Q ss_pred hHHHHHHHHHHhcCHHHHHHHHHHHhhcCCCCCHHHHHHHHhhhhhhccchhhHHHHHH
Q 026544 7 HHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILS 65 (237)
Q Consensus 7 el~~~AklaeqaeRy~Dm~~~mK~vi~~~~eLt~EERnLLSvAyKn~i~~~R~s~R~l~ 65 (237)
-+..+|.+..+.|++++++.++++++...+.. .+-...+..+|-. .+....|...+.
T Consensus 59 ~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~-~~~~~~la~~~~~-~~~~~~A~~~~~ 115 (243)
T 2q7f_A 59 PYINFANLLSSVNELERALAFYDKALELDSSA-ATAYYGAGNVYVV-KEMYKEAKDMFE 115 (243)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHcCCcc-hHHHHHHHHHHHH-hccHHHHHHHHH
Confidence 34567788888899999999988888765542 3333444444432 344445555553
No 75
>1is1_A Ribosome recycling factor; translation; 2.20A {Vibrio parahaemolyticus} SCOP: d.67.3.1 PDB: 3r8n_Y
Probab=46.31 E-value=26 Score=29.02 Aligned_cols=69 Identities=17% Similarity=0.143 Sum_probs=45.1
Q ss_pred CCCCHHHHHHHHhhhhhhccchhhHHHHHHhHhh----hhhhhCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 026544 36 VELTVEERNLVSVGYKNVIGARRASWRILSSIEQ----KEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHL 109 (237)
Q Consensus 36 ~eLt~EERnLLSvAyKn~i~~~R~s~R~l~sieq----k~e~~~~~~~~~~i~~yk~kIe~EL~~iC~eii~lID~~L 109 (237)
|+||.|-|.=|....|...-.-|.+.|.+..--. +.+..+ ..-++-..+.++|+..+.+..+.-||..+
T Consensus 103 P~lTeErRkelvK~~k~~~E~aKvaiRniRrda~~~lKk~~K~~-----~iseD~~k~~e~~iQkltd~~i~~id~~~ 175 (185)
T 1is1_A 103 PPLTEERRKDLVKIVRGEAEGGRVAVRNIRRDANNDLKALLKDK-----EISEDEDRKAQEEIQKLTDVAVKKIDEVL 175 (185)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SSCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC-----CCChhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7899999999999999888888888888732110 111111 01134445667777777777777777644
No 76
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=46.26 E-value=99 Score=23.79 Aligned_cols=57 Identities=9% Similarity=0.025 Sum_probs=36.0
Q ss_pred hHHHHHHHHHHhcCHHHHHHHHHHHhhcCCCCCHHHHHHHHhhhhhhccchhhHHHHHH
Q 026544 7 HHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILS 65 (237)
Q Consensus 7 el~~~AklaeqaeRy~Dm~~~mK~vi~~~~eLt~EERnLLSvAyKn~i~~~R~s~R~l~ 65 (237)
-+..+|.+..+.|+|++++.+++++++.+|.. .+-...+..+|-. .+..-.|...+.
T Consensus 39 ~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~~-~~~~~~la~~~~~-~~~~~~A~~~~~ 95 (252)
T 2ho1_A 39 AYIQLGLGYLQRGNTEQAKVPLRKALEIDPSS-ADAHAALAVVFQT-EMEPKLADEEYR 95 (252)
T ss_dssp HHHHHHHHHHHTTCTGGGHHHHHHHHHHCTTC-HHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred HHHHHHHHHHHcCChHHHHHHHHHHHhcCCCh-HHHHHHHHHHHHH-cCCHHHHHHHHH
Confidence 35677788888899999999998888765543 3444444544433 344445555543
No 77
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=46.00 E-value=1e+02 Score=23.96 Aligned_cols=44 Identities=14% Similarity=0.094 Sum_probs=25.6
Q ss_pred hhHHHHHHHHHHhcCHHHHHHHHHHHhhcCCCCCHHHHHHHHhhh
Q 026544 6 EHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGY 50 (237)
Q Consensus 6 eel~~~AklaeqaeRy~Dm~~~mK~vi~~~~eLt~EERnLLSvAy 50 (237)
+-+..++.+..+.|+|++++..+.+++..+|.- .+=...+..++
T Consensus 6 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~-~~a~~~lg~~~ 49 (217)
T 2pl2_A 6 QNPLRLGVQLYALGRYDAALTLFERALKENPQD-PEALYWLARTQ 49 (217)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHTTSSSC-HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC-HHHHHHHHHHH
Confidence 345566666667777777777777776665543 33333444443
No 78
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=45.86 E-value=1e+02 Score=23.75 Aligned_cols=59 Identities=14% Similarity=-0.021 Sum_probs=39.9
Q ss_pred hHHHHHHHHHHhcCHHHHHHHHHHHhhcCCCCCHHHHHHHHhhhhhhccchhhHHHHHHhH
Q 026544 7 HHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSI 67 (237)
Q Consensus 7 el~~~AklaeqaeRy~Dm~~~mK~vi~~~~eLt~EERnLLSvAyKn~i~~~R~s~R~l~si 67 (237)
-+..+|.+..+.|+|+++..+++++++.++. +.+-...+..+|-. .+....|.+.+...
T Consensus 73 ~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~la~~~~~-~g~~~~A~~~~~~~ 131 (252)
T 2ho1_A 73 AHAALAVVFQTEMEPKLADEEYRKALASDSR-NARVLNNYGGFLYE-QKRYEEAYQRLLEA 131 (252)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHH-TTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHCcC-cHHHHHHHHHHHHH-HhHHHHHHHHHHHH
Confidence 3456788889999999999999999987665 33444445555433 44555666665443
No 79
>1wqg_A Ribosome recycling factor; translation factor, triple-helix bundle, protein synthesis, translation; 2.15A {Mycobacterium tuberculosis} SCOP: d.67.3.1 PDB: 1wqf_A 1wqh_A
Probab=45.55 E-value=28 Score=28.90 Aligned_cols=69 Identities=22% Similarity=0.204 Sum_probs=44.4
Q ss_pred CCCCHHHHHHHHhhhhhhccchhhHHHHHHhHhh----hhhhhCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 026544 36 VELTVEERNLVSVGYKNVIGARRASWRILSSIEQ----KEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHL 109 (237)
Q Consensus 36 ~eLt~EERnLLSvAyKn~i~~~R~s~R~l~sieq----k~e~~~~~~~~~~i~~yk~kIe~EL~~iC~eii~lID~~L 109 (237)
|+||.|-|.=|....|...-.-|.+.|.+..--. +.+..+ ..-++-..+.++|+..+.+..+.-||..+
T Consensus 103 P~lTeErRkelvK~~k~~~E~aKvaiRniRrda~~~lKk~~K~~-----~iseD~~k~~e~~iQkltd~~i~~id~~~ 175 (185)
T 1wqg_A 103 PQLTEERRRELVKQAKHKGEEAKVSVRNIRRKAMEELHRIRKEG-----EAGEDEVGRAEKDLDKTTHQYVTQIDELV 175 (185)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SSCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC-----CCChhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7899999999999989888888888888742110 111111 01134445666777777777777776544
No 80
>1eh1_A Ribosome recycling factor; translation, hinge variability; 2.60A {Thermus thermophilus} SCOP: d.67.3.1 PDB: 2qbe_6 2qbg_6 2qbi_6* 2qbk_6* 2v46_Y* 2v48_Y* 2z4l_6* 2z4n_6* 3j0d_J 3j0e_G
Probab=45.18 E-value=32 Score=28.52 Aligned_cols=73 Identities=18% Similarity=0.197 Sum_probs=46.2
Q ss_pred CCCCHHHHHHHHhhhhhhccchhhHHHHHHhHhhhhhhhCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 026544 36 VELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHL 109 (237)
Q Consensus 36 ~eLt~EERnLLSvAyKn~i~~~R~s~R~l~sieqk~e~~~~~~~~~~i~~yk~kIe~EL~~iC~eii~lID~~L 109 (237)
|+||.|-|.=|....|...-.-|.+.|.+..--.+.- +...+.-.+-++-..+.++|+..+.+..+.-||..+
T Consensus 104 P~lTeErRkelvK~~k~~~E~aKvaiRniRrda~~~l-Kk~~K~~~iseD~~k~~e~~iQkltd~~i~~id~~~ 176 (185)
T 1eh1_A 104 PPLTEERRKDLVRAVRQYAEEGRVAIRNIRREALDKL-KKLAKELHLSEDETKRAEAEIQKITDEFIAKADQLA 176 (185)
T ss_dssp CCCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhhhcCCCChhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7899999999999999988888888888742111000 000000011244455677777777777777777654
No 81
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=45.14 E-value=49 Score=22.99 Aligned_cols=56 Identities=13% Similarity=0.042 Sum_probs=38.4
Q ss_pred hHHHHHHHHHHhcCHHHHHHHHHHHhhcCCCCCHHHHHHHHhhhhhhccchhhHHHHH
Q 026544 7 HHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRIL 64 (237)
Q Consensus 7 el~~~AklaeqaeRy~Dm~~~mK~vi~~~~eLt~EERnLLSvAyKn~i~~~R~s~R~l 64 (237)
-+..++.+..+.|+|++++.+++++++.+|.- .+=...+..+|-. .+....|...+
T Consensus 29 ~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~-~~~~~~l~~~~~~-~g~~~~A~~~~ 84 (117)
T 3k9i_A 29 CYLGLGSTFRTLGEYRKAEAVLANGVKQFPNH-QALRVFYAMVLYN-LGRYEQGVELL 84 (117)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHH-HTCHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCc-hHHHHHHHHHHHH-cCCHHHHHHHH
Confidence 35678888889999999999999999887764 4444455555543 34444454444
No 82
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=43.82 E-value=43 Score=24.18 Aligned_cols=58 Identities=7% Similarity=0.036 Sum_probs=42.3
Q ss_pred hHHHHHHHHHHhcCHHHHHHHHHHHhhcCCCCCHHHHHHHHhhhhhhccchhhHHHHHHh
Q 026544 7 HHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSS 66 (237)
Q Consensus 7 el~~~AklaeqaeRy~Dm~~~mK~vi~~~~eLt~EERnLLSvAyKn~i~~~R~s~R~l~s 66 (237)
-+..+|.+..+.|+|++++...+++++.+|.- .+=...+..+|.. .+..-.|...+..
T Consensus 49 ~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~-~~a~~~lg~~~~~-~~~~~~A~~~~~~ 106 (126)
T 4gco_A 49 LYSNRAACLTKLMEFQRALDDCDTCIRLDSKF-IKGYIRKAACLVA-MREWSKAQRAYED 106 (126)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHH-TTCHHHHHHHHHH
T ss_pred HHHHHhhHHHhhccHHHHHHHHHHHHHhhhhh-hHHHHHHHHHHHH-CCCHHHHHHHHHH
Confidence 34567888889999999999999999887764 4445666777754 4556667666643
No 83
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=41.92 E-value=1.3e+02 Score=23.77 Aligned_cols=59 Identities=15% Similarity=0.074 Sum_probs=42.5
Q ss_pred HHHHHHHHHhcCHHHHHHHHHHHhhcCCC--CCHHHHHHHHhhhhhh---------ccchhhHHHHHHhH
Q 026544 9 VYLARLAEQAERYDEMVEAMKKVAKLDVE--LTVEERNLVSVGYKNV---------IGARRASWRILSSI 67 (237)
Q Consensus 9 ~~~AklaeqaeRy~Dm~~~mK~vi~~~~e--Lt~EERnLLSvAyKn~---------i~~~R~s~R~l~si 67 (237)
..+|.+..+.|+|++++...++++...|. ...+-...+..+|.+. .+....|...+..+
T Consensus 152 ~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~a~~~l~~~~~~~g~~~~~~~~~~~~~~A~~~~~~~ 221 (261)
T 3qky_A 152 YEAARLYERRELYEAAAVTYEAVFDAYPDTPWADDALVGAMRAYIAYAEQSVRARQPERYRRAVELYERL 221 (261)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHHHHTSCGGGHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHccCHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHhcccchhhcccchHHHHHHHHHHH
Confidence 67889999999999999999999987664 3456666777777654 14445555555433
No 84
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=41.63 E-value=78 Score=34.48 Aligned_cols=25 Identities=20% Similarity=0.073 Sum_probs=19.9
Q ss_pred HHHHHHHHHHhcCccHHHHHHHHHhH
Q 026544 176 LNFSVFYYEILNSPERLTCIFLFLSR 201 (237)
Q Consensus 176 LN~SVF~yEIl~~~~~~A~~iA~~~~ 201 (237)
|.-.+-+|+-.|.-++ |+.+...++
T Consensus 1283 Leeli~yYe~~G~feE-AI~LlE~aL 1307 (1630)
T 1xi4_A 1283 LEELINYYQDRGYFEE-LITMLEAAL 1307 (1630)
T ss_pred HHHHHHHHHHcCCHHH-HHHHHHHHh
Confidence 3355778999999999 999987773
No 85
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=41.53 E-value=28 Score=32.90 Aligned_cols=52 Identities=23% Similarity=0.325 Sum_probs=32.7
Q ss_pred HHHHH---hcCcccchhhccCcchHHHHHHHHHHHHHHHHHHHhccCCCCCchhHHHHHHH------HHHHHH
Q 026544 121 FYYKM---KGDYYRYLAEFKGADDRKEAADHSLKAYEAATAAAASELPPTHPIRLGLALNF------SVFYYE 184 (237)
Q Consensus 121 Fy~Km---KGDyyRYlaE~~~~~~~~~~~~~A~~aY~~A~~iA~~~L~pt~PirLGLaLN~------SVF~yE 184 (237)
.+++. -||-.||.... ..|...|++|..+.=.+=.| --.||+.-.+ +||||-
T Consensus 150 ~~hr~l~~LGDL~RY~~~~----------~~A~~~Y~~A~~~~P~~G~~--~nqLavla~~~~~~l~a~y~y~ 210 (497)
T 1ya0_A 150 ICQHCLVHLGDIARYRNQT----------SQAESYYRHAAQLVPSNGQP--YNQLAILASSKGDHLTTIFYYC 210 (497)
T ss_dssp HHHHHHHHHHHHHHHTTCH----------HHHHHHHHHHHHHCTTBSHH--HHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHcccHHHHHHHH----------HHHHHHHHHHHHhCCCCCch--HHHHHHHHhcccccHHHHHHHH
Confidence 44554 89999999764 57999999998764211111 2356654444 566654
No 86
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=40.44 E-value=61 Score=21.41 Aligned_cols=46 Identities=13% Similarity=0.104 Sum_probs=30.9
Q ss_pred HHHHHHHHHHHHHHhccCCCCCchhHHHHHHHHHHHHHHhcCccHHHHHHHHHhHH
Q 026544 147 DHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERLTCIFLFLSRQ 202 (237)
Q Consensus 147 ~~A~~aY~~A~~iA~~~L~pt~PirLGLaLN~SVF~yEIl~~~~~~A~~iA~~~~~ 202 (237)
+.|...|++|+++ .|.+| ....|.+..++ -+++.++ |+...+.+++
T Consensus 21 ~~A~~~~~~al~~-----~p~~~---~~~~~lg~~~~-~~g~~~~-A~~~~~~al~ 66 (111)
T 2l6j_A 21 REAVHCYDQLITA-----QPQNP---VGYSNKAMALI-KLGEYTQ-AIQMCQQGLR 66 (111)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHH-HTTCHHH-HHHHHHHHHT
T ss_pred HHHHHHHHHHHhc-----CCCCH---HHHHHHHHHHH-HhcCHHH-HHHHHHHHHH
Confidence 4688899999865 45554 33456655544 4689999 8887666654
No 87
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=39.47 E-value=67 Score=21.47 Aligned_cols=39 Identities=10% Similarity=0.039 Sum_probs=28.3
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHhhcCCCCCHHHHHHHHh
Q 026544 8 HVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSV 48 (237)
Q Consensus 8 l~~~AklaeqaeRy~Dm~~~mK~vi~~~~eLt~EERnLLSv 48 (237)
+..+|.+..+.|+|+++..+++++++..+ +.+-...+..
T Consensus 82 ~~~la~~~~~~~~~~~A~~~~~~~~~~~~--~~~~~~~l~~ 120 (131)
T 1elr_A 82 YARIGNSYFKEEKYKDAIHFYNKSLAEHR--TPDVLKKCQQ 120 (131)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCC--CHHHHHHHHH
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHHhCC--CHHHHHHHHH
Confidence 45678888889999999999999887655 3444444433
No 88
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=39.32 E-value=77 Score=26.06 Aligned_cols=54 Identities=7% Similarity=-0.107 Sum_probs=40.7
Q ss_pred HHHHHHHHHHHHHHhccCCCCCchhHHHHHHHHHHHHHHhcCccHHHHHHHHHhHHHH
Q 026544 147 DHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERLTCIFLFLSRQTL 204 (237)
Q Consensus 147 ~~A~~aY~~A~~iA~~~L~pt~PirLGLaLN~SVF~yEIl~~~~~~A~~iA~~~~~~~ 204 (237)
+.|.++|++|.++... +. +|-..+.+++-.-..|.-+++.++ |+...+.+++-.
T Consensus 54 ~~A~~~~~~al~~~~~-~~--~~~~~a~~~~~lg~~~~~~g~~~~-A~~~~~~Al~l~ 107 (292)
T 1qqe_A 54 NLAGDSFLKAADYQKK-AG--NEDEAGNTYVEAYKCFKSGGNSVN-AVDSLENAIQIF 107 (292)
T ss_dssp HHHHHHHHHHHHHHHH-TT--CHHHHHHHHHHHHHHHHHTTCHHH-HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH-hC--CHHHHHHHHHHHHHHHHHCCCHHH-HHHHHHHHHHHH
Confidence 4699999999998753 32 566666677666667778899999 998877777643
No 89
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=38.90 E-value=57 Score=22.67 Aligned_cols=48 Identities=19% Similarity=0.064 Sum_probs=27.1
Q ss_pred HHHHHHHHHHHHHhccCCCCCchhHHHHHHHHHHHHHHhcCccHHHHHHHHHhHH
Q 026544 148 HSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERLTCIFLFLSRQ 202 (237)
Q Consensus 148 ~A~~aY~~A~~iA~~~L~pt~PirLGLaLN~SVF~yEIl~~~~~~A~~iA~~~~~ 202 (237)
.|...|++|++ +.|.+|.......|.+..++. +++.++ |+.....+++
T Consensus 46 ~A~~~~~~a~~-----~~~~~~~~~~~~~~~a~~~~~-~~~~~~-A~~~~~~~~~ 93 (148)
T 2dba_A 46 GALAAYTQALG-----LDATPQDQAVLHRNRAACHLK-LEDYDK-AETEASKAIE 93 (148)
T ss_dssp HHHHHHHHHHT-----SCCCHHHHHHHHHHHHHHHHH-TTCHHH-HHHHHHHHHH
T ss_pred HHHHHHHHHHH-----HcccchHHHHHHHHHHHHHHH-HccHHH-HHHHHHHHHh
Confidence 45666666643 345555545555555555443 467777 7666655554
No 90
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=38.58 E-value=1.3e+02 Score=22.79 Aligned_cols=58 Identities=9% Similarity=-0.009 Sum_probs=24.5
Q ss_pred hHHHHHHHHHHhcCHHHHHHHHHHHhhcCCCCCHHHHHHHHhhhhhhccchhhHHHHHHh
Q 026544 7 HHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSS 66 (237)
Q Consensus 7 el~~~AklaeqaeRy~Dm~~~mK~vi~~~~eLt~EERnLLSvAyKn~i~~~R~s~R~l~s 66 (237)
.+..+|...-+.|+|++++.+.++++..+|. +.+-...+..+|-. .+....|...+..
T Consensus 25 ~~~~~a~~~~~~~~~~~A~~~~~~~l~~~~~-~~~~~~~la~~~~~-~~~~~~A~~~~~~ 82 (243)
T 2q7f_A 25 TGGQQMGRGSEFGDYEKAAEAFTKAIEENKE-DAIPYINFANLLSS-VNELERALAFYDK 82 (243)
T ss_dssp -----------------CCTTHHHHHTTCTT-CHHHHHHHHHHHHH-TTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhCHHHHHHHHHHHHHhCcc-cHHHHHHHHHHHHH-cCCHHHHHHHHHH
Confidence 4556788888899999999999999886554 34444445554432 4445555555543
No 91
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=38.40 E-value=80 Score=25.78 Aligned_cols=175 Identities=11% Similarity=-0.038 Sum_probs=86.4
Q ss_pred hhHHHHHHHHHHhcCHHHHHHHHHHHhhcCCCCCHHHHHH------HHhhhhhhccchhhHHHHHHh-HhhhhhhhCchh
Q 026544 6 EHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNL------VSVGYKNVIGARRASWRILSS-IEQKEEAKGNEQ 78 (237)
Q Consensus 6 eel~~~AklaeqaeRy~Dm~~~mK~vi~~~~eLt~EERnL------LSvAyKn~i~~~R~s~R~l~s-ieqk~e~~~~~~ 78 (237)
+.+...+...-..|+|+++++..++.++..+.. .+.... +...| ...+..-.|...+.. ++..... .+..
T Consensus 76 ~~l~~~~~~~~~~~~y~~A~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~A~~~~~~al~~~~~~-~~~~ 152 (293)
T 2qfc_A 76 KQFKDQVIMLCKQKRYKEIYNKVWNELKKEEYH-PEFQQFLQWQYYVAAYV-LKKVDYEYCILELKKLLNQQLTG-IDVY 152 (293)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCCC-HHHHHHHHHHHHHHHHH-HTSSCHHHHHHHHHHHHTTCCCS-SCTT
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHhccccCC-hhHHHHHHHHHHHHHHH-hcCCCHHHHHHHHHHHHHHHhcC-CchH
Confidence 344566777777899999999999988765553 322221 11111 112233344444422 2111110 1111
Q ss_pred H-H----HHHHHHH-HHHHHHHHHHHHHHHHHhhhccCCCCCCChhHHHHHHHhcCcccchhhccCcchHHHHHHHHHHH
Q 026544 79 N-V----KRIKEYR-QRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKA 152 (237)
Q Consensus 79 ~-~----~~i~~yk-~kIe~EL~~iC~eii~lID~~Lip~~~~~eskVFy~KmKGDyyRYlaE~~~~~~~~~~~~~A~~a 152 (237)
. . ..-.-|. ..=-++-....+..+++.+. .|. ++...+-.+-..|..|..+ |+ -+.|...
T Consensus 153 ~~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~--~~~--~~~~~~~~~~nlg~~y~~~-----~~-----y~~Al~~ 218 (293)
T 2qfc_A 153 QNLYIENAIANIYAENGYLKKGIDLFEQILKQLEA--LHD--NEEFDVKVRYNHAKALYLD-----SR-----YEESLYQ 218 (293)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH--SCC--CHHHHHHHHHHHHHHHHHT-----TC-----HHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHh--cCc--cccchHHHHHhHHHHHHHH-----hh-----HHHHHHH
Confidence 0 0 1111111 11112344455566655543 232 1222212333445444322 11 2569999
Q ss_pred HHHHHHHHhccCCCCCchhHHHHHHHHHHHHHHhcCccHHH-HHHHHHhH
Q 026544 153 YEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERLT-CIFLFLSR 201 (237)
Q Consensus 153 Y~~A~~iA~~~L~pt~PirLGLaLN~SVF~yEIl~~~~~~A-~~iA~~~~ 201 (237)
|++|++++.. ..++..++.+++.--..|.-+++.++ | ....+.++
T Consensus 219 ~~kal~~~~~---~~~~~~~~~~~~~lg~~y~~~g~~~~-Ai~~~~~~Al 264 (293)
T 2qfc_A 219 VNKAIEISCR---INSMALIGQLYYQRGECLRKLEYEEA-EIEDAYKKAS 264 (293)
T ss_dssp HHHHHHHHHH---TTBCSSHHHHHHHHHHHHHHTTCCHH-HHHHHHHHHH
T ss_pred HHHHHHHHHh---cCcHHHHHHHHHHHHHHHHHcCCcHH-HHHHHHHHHH
Confidence 9999999853 23444566666555667778899999 8 44344444
No 92
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=38.29 E-value=91 Score=21.48 Aligned_cols=47 Identities=15% Similarity=0.222 Sum_probs=33.5
Q ss_pred HHHHHHHHHHHHHHhccCCCCCchhHHHHHHHHHHHHHHhcCccHHHHHHHHHhHHH
Q 026544 147 DHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERLTCIFLFLSRQT 203 (237)
Q Consensus 147 ~~A~~aY~~A~~iA~~~L~pt~PirLGLaLN~SVF~yEIl~~~~~~A~~iA~~~~~~ 203 (237)
+.|...|++|+++ .|.+| ....|.+..++. +++.++ |....+.+++.
T Consensus 44 ~~A~~~~~~al~~-----~p~~~---~~~~~l~~~~~~-~g~~~~-A~~~~~~al~~ 90 (117)
T 3k9i_A 44 RKAEAVLANGVKQ-----FPNHQ---ALRVFYAMVLYN-LGRYEQ-GVELLLKIIAE 90 (117)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-HTCHHH-HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCch---HHHHHHHHHHHH-cCCHHH-HHHHHHHHHHh
Confidence 5688888888765 45553 455666665555 699999 99988777765
No 93
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=37.92 E-value=1.2e+02 Score=22.41 Aligned_cols=57 Identities=11% Similarity=0.038 Sum_probs=37.9
Q ss_pred hHHHHHHHHHHhcCHHHHHHHHHHHhhcCCCCCHHHHHHHHhhhhhhccchhhHHHHHH
Q 026544 7 HHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILS 65 (237)
Q Consensus 7 el~~~AklaeqaeRy~Dm~~~mK~vi~~~~eLt~EERnLLSvAyKn~i~~~R~s~R~l~ 65 (237)
-+..+|....+.|+|++++.+++++++..|.- .+-...+..+|-. .+....|...+.
T Consensus 10 ~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~-~~~~~~l~~~~~~-~~~~~~A~~~~~ 66 (225)
T 2vq2_A 10 IKTQLAMEYMRGQDYRQATASIEDALKSDPKN-ELAWLVRAEIYQY-LKVNDKAQESFR 66 (225)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHhCccc-hHHHHHHHHHHHH-cCChHHHHHHHH
Confidence 34567888888999999999999998876543 3444445555433 344455555554
No 94
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=37.91 E-value=51 Score=24.17 Aligned_cols=56 Identities=9% Similarity=-0.120 Sum_probs=38.9
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHhhcCCCCCHHHHHHHHhhhhhhccchhhHHHHHH
Q 026544 8 HVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILS 65 (237)
Q Consensus 8 l~~~AklaeqaeRy~Dm~~~mK~vi~~~~eLt~EERnLLSvAyKn~i~~~R~s~R~l~ 65 (237)
+..+|....+.|+|++++.+..+++..+|. +..=...+..+|.. .+....|...+.
T Consensus 66 ~~nla~~~~~~~~~~~A~~~~~~al~~~p~-~~~a~~~~g~~~~~-~g~~~~A~~~~~ 121 (162)
T 3rkv_A 66 YANMSQCYLNIGDLHEAEETSSEVLKREET-NEKALFRRAKARIA-AWKLDEAEEDLK 121 (162)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred HHHHHHHHHhcCcHHHHHHHHHHHHhcCCc-chHHHHHHHHHHHH-HhcHHHHHHHHH
Confidence 456777888889999999999999887665 34444555666644 455566666554
No 95
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=37.89 E-value=1.1e+02 Score=21.88 Aligned_cols=29 Identities=21% Similarity=0.200 Sum_probs=15.8
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHhhcCC
Q 026544 8 HVYLARLAEQAERYDEMVEAMKKVAKLDV 36 (237)
Q Consensus 8 l~~~AklaeqaeRy~Dm~~~mK~vi~~~~ 36 (237)
+..+|....+.|+|++++..+++++..+|
T Consensus 21 ~~~~a~~~~~~g~~~~A~~~~~~al~~~p 49 (142)
T 2xcb_A 21 LYALGFNQYQAGKWDDAQKIFQALCMLDH 49 (142)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHccHHHHHHHHHHHHHhCC
Confidence 34445555555666666666655555443
No 96
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=37.58 E-value=1.2e+02 Score=22.13 Aligned_cols=29 Identities=7% Similarity=0.083 Sum_probs=14.7
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHhhcCC
Q 026544 8 HVYLARLAEQAERYDEMVEAMKKVAKLDV 36 (237)
Q Consensus 8 l~~~AklaeqaeRy~Dm~~~mK~vi~~~~ 36 (237)
+..++.+..+.|+|++++.+..++++.+|
T Consensus 14 ~~~~g~~~~~~g~~~~A~~~~~~al~~~p 42 (164)
T 3sz7_A 14 LKSEGNAAMARKEYSKAIDLYTQALSIAP 42 (164)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHST
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Confidence 34444555555555555555555554433
No 97
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=36.33 E-value=82 Score=22.32 Aligned_cols=58 Identities=12% Similarity=0.002 Sum_probs=42.3
Q ss_pred hhHHHHHHHHHHhcCHHHHHHHHHHHhhcCCCCCHHHHHHHHhhhhhhccchhhHHHHHH
Q 026544 6 EHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILS 65 (237)
Q Consensus 6 eel~~~AklaeqaeRy~Dm~~~mK~vi~~~~eLt~EERnLLSvAyKn~i~~~R~s~R~l~ 65 (237)
+....+|...-+.|+|++++..+++++..+|. +.+=...+..++-. .+....|...+.
T Consensus 18 ~~~~~~g~~~~~~g~~~~A~~~~~~al~~~P~-~~~a~~~lg~~~~~-~g~~~~A~~~~~ 75 (121)
T 1hxi_A 18 ENPMEEGLSMLKLANLAEAALAFEAVCQKEPE-REEAWRSLGLTQAE-NEKDGLAIIALN 75 (121)
T ss_dssp SCHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred hhHHHHHHHHHHcCCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHH-cCCHHHHHHHHH
Confidence 45678888888999999999999999987765 45555666766653 355555555554
No 98
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=35.91 E-value=94 Score=20.61 Aligned_cols=59 Identities=7% Similarity=0.039 Sum_probs=41.7
Q ss_pred hHHHHHHHHHHhcCHHHHHHHHHHHhhcCCCCCHHHHHHHHhhhhhhccchhhHHHHHHhH
Q 026544 7 HHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSI 67 (237)
Q Consensus 7 el~~~AklaeqaeRy~Dm~~~mK~vi~~~~eLt~EERnLLSvAyKn~i~~~R~s~R~l~si 67 (237)
-+..+|.+..+.|+|++++.+..+++...|. +..-...+..+|-. .+....|...+...
T Consensus 48 ~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~A~~~~~~~ 106 (131)
T 2vyi_A 48 YFCNRAAAYSKLGNYAGAVQDCERAICIDPA-YSKAYGRMGLALSS-LNKHVEAVAYYKKA 106 (131)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHH-TTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhchHHHHHHHHHHHhcCcc-CHHHHHHHHHHHHH-hCCHHHHHHHHHHH
Confidence 3567888888999999999999999987654 34445555655544 45566776666543
No 99
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=35.45 E-value=62 Score=20.51 Aligned_cols=58 Identities=19% Similarity=0.177 Sum_probs=40.5
Q ss_pred hHHHHHHHHHHhcCHHHHHHHHHHHhhcCCCCCHHHHHHHHhhhhhhccchhhHHHHHHh
Q 026544 7 HHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSS 66 (237)
Q Consensus 7 el~~~AklaeqaeRy~Dm~~~mK~vi~~~~eLt~EERnLLSvAyKn~i~~~R~s~R~l~s 66 (237)
-+..+|.+..+.|+|++++.+.++.+..+|.- .+-...+..+|.. .+....|...+..
T Consensus 11 ~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~-~~~~~~l~~~~~~-~~~~~~A~~~~~~ 68 (91)
T 1na3_A 11 AWYNLGNAYYKQGDYDEAIEYYQKALELDPNN-AEAWYNLGNAYYK-QGDYDEAIEYYQK 68 (91)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHH-TTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHhcCCCC-HHHHHHHHHHHHH-HhhHHHHHHHHHH
Confidence 45567888889999999999999999876543 4444555655543 4555666666643
No 100
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=35.32 E-value=84 Score=19.83 Aligned_cols=47 Identities=15% Similarity=0.224 Sum_probs=31.1
Q ss_pred HHHHHHHHHHHHHHhccCCCCCchhHHHHHHHHHHHHHHhcCccHHHHHHHHHhHHH
Q 026544 147 DHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERLTCIFLFLSRQT 203 (237)
Q Consensus 147 ~~A~~aY~~A~~iA~~~L~pt~PirLGLaLN~SVF~yEIl~~~~~~A~~iA~~~~~~ 203 (237)
+.|...|++|+++ .|.+| ....|.+..++ -+++.++ |......+++.
T Consensus 26 ~~A~~~~~~a~~~-----~~~~~---~~~~~l~~~~~-~~~~~~~-A~~~~~~a~~~ 72 (91)
T 1na3_A 26 DEAIEYYQKALEL-----DPNNA---EAWYNLGNAYY-KQGDYDE-AIEYYQKALEL 72 (91)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHH-HTTCHHH-HHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-----CCCCH---HHHHHHHHHHH-HHhhHHH-HHHHHHHHHhc
Confidence 4688889888865 34443 33445555544 4689999 98877776653
No 101
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=35.24 E-value=90 Score=20.15 Aligned_cols=28 Identities=25% Similarity=0.321 Sum_probs=15.4
Q ss_pred HHHHHHHHHhcCHHHHHHHHHHHhhcCC
Q 026544 9 VYLARLAEQAERYDEMVEAMKKVAKLDV 36 (237)
Q Consensus 9 ~~~AklaeqaeRy~Dm~~~mK~vi~~~~ 36 (237)
..+|.+..+.|+|++++.+++++++..+
T Consensus 10 ~~~~~~~~~~~~~~~A~~~~~~a~~~~~ 37 (112)
T 2kck_A 10 YLEGVLQYDAGNYTESIDLFEKAIQLDP 37 (112)
T ss_dssp GGHHHHHHSSCCHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHhCc
Confidence 3445555555666666666666555443
No 102
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=34.13 E-value=73 Score=23.76 Aligned_cols=32 Identities=22% Similarity=0.198 Sum_probs=23.5
Q ss_pred hHHHHHHHHHHhcCHHHHHHHHHHHhhcCCCC
Q 026544 7 HHVYLARLAEQAERYDEMVEAMKKVAKLDVEL 38 (237)
Q Consensus 7 el~~~AklaeqaeRy~Dm~~~mK~vi~~~~eL 38 (237)
-+..+|.+..+.|++++++.++.+++..+|..
T Consensus 110 ~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~ 141 (176)
T 2r5s_A 110 LACELAVQYNQVGRDEEALELLWNILKVNLGA 141 (176)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTT
T ss_pred HHHHHHHHHHHcccHHHHHHHHHHHHHhCccc
Confidence 34567777777888888888888887776654
No 103
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=34.12 E-value=78 Score=20.74 Aligned_cols=30 Identities=3% Similarity=0.065 Sum_probs=25.5
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHhhcCCC
Q 026544 8 HVYLARLAEQAERYDEMVEAMKKVAKLDVE 37 (237)
Q Consensus 8 l~~~AklaeqaeRy~Dm~~~mK~vi~~~~e 37 (237)
.+.+|...-+.|+|++++...+++++.+|.
T Consensus 3 ~~~~a~~~~~~~~~~~A~~~~~~al~~~p~ 32 (99)
T 2kc7_A 3 QLKTIKELINQGDIENALQALEEFLQTEPV 32 (99)
T ss_dssp THHHHHHHHHHTCHHHHHHHHHHHHHHCSS
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHCCC
Confidence 356788888899999999999999987665
No 104
>2wh5_A Acyl-COA-binding domain-containing protein 4; alternative splicing, fatty acid metabolism, lipid transport, lipid binding protein; HET: STE ST9 COA; 2.60A {Homo sapiens}
Probab=33.86 E-value=59 Score=24.45 Aligned_cols=47 Identities=17% Similarity=0.265 Sum_probs=34.4
Q ss_pred cCHHHHHHHHHHHhhcCC-CCCHHHHHHHHhhhhhhccc----------------hhhHHHHHH
Q 026544 19 ERYDEMVEAMKKVAKLDV-ELTVEERNLVSVGYKNVIGA----------------RRASWRILS 65 (237)
Q Consensus 19 eRy~Dm~~~mK~vi~~~~-eLt~EERnLLSvAyKn~i~~----------------~R~s~R~l~ 65 (237)
++|+.+++.++.+-..++ .++.+++-.|-.-||..... +..||..+.
T Consensus 10 ~~F~~A~~~vk~l~~~g~~~ps~e~~L~LYaLyKQAt~Gd~~~~~Pg~~d~~~~aKw~AW~~l~ 73 (106)
T 2wh5_A 10 KQFQAAVSVIQNLPKNGSYRPSYEEMLRFYSYYKQATMGPCLVPRPGFWDPIGRYKWDAWNSLG 73 (106)
T ss_dssp HHHHHHHHHHHHSCSSCSCCCCHHHHHHHHHHHHHHHHCSCCSCCCCTTCHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHhccccCCCCCCHHHHHHHHHHHhhhccCCCCCCCCCcccHHHHHHHHHHHHhc
Confidence 678888999988754332 68999998888888877421 567787774
No 105
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=33.72 E-value=62 Score=21.28 Aligned_cols=33 Identities=3% Similarity=0.109 Sum_probs=27.5
Q ss_pred hHHHHHHHHHHhcCHHHHHHHHHHHhhcCCCCC
Q 026544 7 HHVYLARLAEQAERYDEMVEAMKKVAKLDVELT 39 (237)
Q Consensus 7 el~~~AklaeqaeRy~Dm~~~mK~vi~~~~eLt 39 (237)
-+..+|.+....|+|++++.+.++++..+|.-.
T Consensus 37 ~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~ 69 (99)
T 2kc7_A 37 AYYLMGNAYRKLGDWQKALNNYQSAIELNPDSP 69 (99)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTST
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcH
Confidence 456778888899999999999999998876543
No 106
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=33.54 E-value=56 Score=21.60 Aligned_cols=31 Identities=13% Similarity=0.075 Sum_probs=19.8
Q ss_pred hhHHHHHHHHHHhcCHHHHHHHHHHHhhcCC
Q 026544 6 EHHVYLARLAEQAERYDEMVEAMKKVAKLDV 36 (237)
Q Consensus 6 eel~~~AklaeqaeRy~Dm~~~mK~vi~~~~ 36 (237)
+.+..++......|+|++++.+.++++..+|
T Consensus 5 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p 35 (111)
T 2l6j_A 5 EKQKEQGNSLFKQGLYREAVHCYDQLITAQP 35 (111)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhcCC
Confidence 3445566666667777777777777665543
No 107
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=33.08 E-value=1.6e+02 Score=22.23 Aligned_cols=44 Identities=14% Similarity=-0.020 Sum_probs=26.5
Q ss_pred hhHHHHHHHHHHhcCHHHHHHHHHHHhhcCCCCCHHHHHHHHhhh
Q 026544 6 EHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGY 50 (237)
Q Consensus 6 eel~~~AklaeqaeRy~Dm~~~mK~vi~~~~eLt~EERnLLSvAy 50 (237)
+-+..+|....+.|+|++++.+.++++..+|. +.+=...+..+|
T Consensus 37 ~~~~~lg~~~~~~g~~~eA~~~~~~al~~~P~-~~~~~~~lg~~~ 80 (151)
T 3gyz_A 37 DDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFY-NVDYIMGLAAIY 80 (151)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHH
Confidence 34556666667777777777777777766553 233344444444
No 108
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=32.54 E-value=1.7e+02 Score=22.52 Aligned_cols=55 Identities=9% Similarity=0.017 Sum_probs=31.0
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHhhcCCCCCHHHHHHHHhhhhhhccchhhHHHHH
Q 026544 8 HVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRIL 64 (237)
Q Consensus 8 l~~~AklaeqaeRy~Dm~~~mK~vi~~~~eLt~EERnLLSvAyKn~i~~~R~s~R~l 64 (237)
+..+|.+....|+|++++.+++++++.+|. +.+-...+..+|.. .+....|...+
T Consensus 46 ~~~l~~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~la~~~~~-~~~~~~A~~~~ 100 (275)
T 1xnf_A 46 LYERGVLYDSLGLRALARNDFSQALAIRPD-MPEVFNYLGIYLTQ-AGNFDAAYEAF 100 (275)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHH-TTCHHHHHHHH
T ss_pred HHHHHHHHHHcccHHHHHHHHHHHHHcCCC-cHHHHHHHHHHHHH-ccCHHHHHHHH
Confidence 445666667777777777777777776554 23334444444432 23334444444
No 109
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=32.43 E-value=39 Score=22.11 Aligned_cols=31 Identities=19% Similarity=0.250 Sum_probs=25.0
Q ss_pred hHHHHHHHHHHhcCHHHHHHHHHHHhhcCCC
Q 026544 7 HHVYLARLAEQAERYDEMVEAMKKVAKLDVE 37 (237)
Q Consensus 7 el~~~AklaeqaeRy~Dm~~~mK~vi~~~~e 37 (237)
-+..+|.+..+.|+|++++.+++++++..|.
T Consensus 42 ~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~ 72 (112)
T 2kck_A 42 YWLMKGKALYNLERYEEAVDCYNYVINVIED 72 (112)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHTSCC
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHHhCcc
Confidence 3456788888899999999999998877554
No 110
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=31.77 E-value=2.1e+02 Score=23.40 Aligned_cols=57 Identities=14% Similarity=0.226 Sum_probs=37.5
Q ss_pred hHHHHHHHHHHhcCHHHHHHHHHHHhhcCCCCCHHHHHHHHhhhhhhccchhhHHHHHH
Q 026544 7 HHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILS 65 (237)
Q Consensus 7 el~~~AklaeqaeRy~Dm~~~mK~vi~~~~eLt~EERnLLSvAyKn~i~~~R~s~R~l~ 65 (237)
-+..++.+..+.|+|++++.+.+++++.+|.- .+-...+..+|.. .+....|...+.
T Consensus 101 ~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~-~~~~~~l~~~~~~-~g~~~~A~~~~~ 157 (365)
T 4eqf_A 101 AWQFLGITQAENENEQAAIVALQRCLELQPNN-LKALMALAVSYTN-TSHQQDACEALK 157 (365)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCC-HHHHHHHHHHHHc-cccHHHHHHHHH
Confidence 35577888888999999999999998876543 3444455555543 344445555543
No 111
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=31.19 E-value=97 Score=21.90 Aligned_cols=26 Identities=19% Similarity=0.185 Sum_probs=11.3
Q ss_pred HHHHHHHhcCHHHHHHHHHHHhhcCC
Q 026544 11 LARLAEQAERYDEMVEAMKKVAKLDV 36 (237)
Q Consensus 11 ~AklaeqaeRy~Dm~~~mK~vi~~~~ 36 (237)
++.+..+.|++++++.+.+++++.+|
T Consensus 57 lg~~~~~~g~~~~A~~~~~~al~l~P 82 (121)
T 1hxi_A 57 LGLTQAENEKDGLAIIALNHARMLDP 82 (121)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCC
Confidence 34444444444444444444444333
No 112
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=31.15 E-value=1.1e+02 Score=19.86 Aligned_cols=58 Identities=14% Similarity=0.070 Sum_probs=39.5
Q ss_pred hhHHHHHHHHHHhcCHHHHHHHHHHHhhcCCCCCHHHHHHHHhhhhhhccchhhHHHHHH
Q 026544 6 EHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILS 65 (237)
Q Consensus 6 eel~~~AklaeqaeRy~Dm~~~mK~vi~~~~eLt~EERnLLSvAyKn~i~~~R~s~R~l~ 65 (237)
+.+..+|....+.|+|++++.++.+++...|. +.+-...++.+|-. .+....+...+.
T Consensus 5 ~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~a~~~~~-~~~~~~A~~~~~ 62 (118)
T 1elw_A 5 NELKEKGNKALSVGNIDDALQCYSEAIKLDPH-NHVLYSNRSAAYAK-KGDYQKAYEDGC 62 (118)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHH-HTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHcccHHHHHHHHHHHHHHCCC-cHHHHHHHHHHHHh-hccHHHHHHHHH
Confidence 45677888888999999999999999877654 34445555555543 344455555554
No 113
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=30.52 E-value=1.8e+02 Score=22.04 Aligned_cols=57 Identities=16% Similarity=0.123 Sum_probs=38.5
Q ss_pred hhHHHHHHHHHHhcCHHHHHHHHHHHhhcCCCCCHHHHHHHHhhhhhhccchhhHHHHHH
Q 026544 6 EHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILS 65 (237)
Q Consensus 6 eel~~~AklaeqaeRy~Dm~~~mK~vi~~~~eLt~EERnLLSvAyKn~i~~~R~s~R~l~ 65 (237)
+.+..+|...-+.|+|++++.+..++++.+ -+.+-...++.+|-. .+....|...+.
T Consensus 6 ~~~~~~g~~~~~~~~~~~A~~~~~~a~~~~--~~~~~~~~~~~~~~~-~~~~~~A~~~~~ 62 (258)
T 3uq3_A 6 DKEKAEGNKFYKARQFDEAIEHYNKAWELH--KDITYLNNRAAAEYE-KGEYETAISTLN 62 (258)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHS--CCTHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHH-cccHHHHHHHHH
Confidence 456778899999999999999999999876 334444555555433 333444444443
No 114
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=30.46 E-value=2e+02 Score=22.67 Aligned_cols=55 Identities=16% Similarity=0.094 Sum_probs=30.6
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHhhcCCCCCHHHHHHHHhhhhhhccchhhHHHHH
Q 026544 8 HVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRIL 64 (237)
Q Consensus 8 l~~~AklaeqaeRy~Dm~~~mK~vi~~~~eLt~EERnLLSvAyKn~i~~~R~s~R~l 64 (237)
+..+|.+..+.|+|++++.+++++++.+|.- .+-...+..+|.. .+....|.+.+
T Consensus 58 ~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~-~~~~~~la~~~~~-~~~~~~A~~~~ 112 (327)
T 3cv0_A 58 WRSLGLTQAENEKDGLAIIALNHARMLDPKD-IAVHAALAVSHTN-EHNANAALASL 112 (327)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHH-TTCHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhcCcCC-HHHHHHHHHHHHH-cCCHHHHHHHH
Confidence 4456677777777777777777777665432 3333344444422 23334444444
No 115
>3caz_A BAR protein; thermo-acidophilic RED ALGA, protein structure initiative, PSI, center for eukaryotic structural genomics, signaling protein; 3.34A {Galdieria sulphuraria}
Probab=29.70 E-value=2.6e+02 Score=23.69 Aligned_cols=111 Identities=23% Similarity=0.323 Sum_probs=62.9
Q ss_pred HHHHHHHHhcCHHHHHHHHHHHhhcCCCCCHHHHHHHHhhhhhhccchhhHHHHHHhHhhhhhhhCchhHHHHHHHHHHH
Q 026544 10 YLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQR 89 (237)
Q Consensus 10 ~~AklaeqaeRy~Dm~~~mK~vi~~~~eLt~EERnLLSvAyKn~i~~~R~s~R~l~sieqk~e~~~~~~~~~~i~~yk~k 89 (237)
..|+|.|....|-.|++-+|.-.. +..|-.|.=.-||=.+. .+|.+. ..++++..=+.--.+
T Consensus 99 eiarllekiqkyfQ~IEtlK~ql~-----nf~e~RLiYDHYKlKvd----------ELEK~~---KdSeKI~RNQsKLss 160 (294)
T 3caz_A 99 EIARLLEKIQKYRQEIEEIKKEYK-----ETDKYRERYDHYKVKLD----------NLEKKN---KDQERIERNQQKFKD 160 (294)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHH----------HHHHHT---CCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHh-----hhHHHHHHHHHHHHhHH----------HHHhcc---chHHHHHHhHHHhhh
Confidence 357888888888888887754321 13455555555554332 233221 122233332333334
Q ss_pred HHHHHHHHHHHHHHHhhhccCCCCCCChhHHHHHHHhcCcccchhhccCcchHHHHHHHHHHHHHHHHHHHh
Q 026544 90 VEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKAYEAATAAAA 161 (237)
Q Consensus 90 Ie~EL~~iC~eii~lID~~Lip~~~~~eskVFy~KmKGDyyRYlaE~~~~~~~~~~~~~A~~aY~~A~~iA~ 161 (237)
-+.--..+|-|+|+-.++ +-|.|+|-++|.++. +=..+--|-+|++.|.
T Consensus 161 AEtaYkqvcsDiInkMnk-----------------ll~n~~riineaasa------vwstqlqyakaleaaa 209 (294)
T 3caz_A 161 AEAAYSSVCADLIQKMET-----------------VWKKHVSIFAEAASA------VWSTQLQYAKALEAAA 209 (294)
T ss_dssp HHHHHHHHHHHHHHHHHH-----------------HHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH-----------------HHHHHHHHHHHHHHH------HHHHHHHHHHHHHHhc
Confidence 445556678887776664 447788888886653 2223445888888774
No 116
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=29.66 E-value=2e+02 Score=22.45 Aligned_cols=180 Identities=11% Similarity=0.060 Sum_probs=88.7
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHhhcC-------CCCCHHHHHHHHhhhhhhccchhhHHHHHHhHhhhh-hh--hCch
Q 026544 8 HVYLARLAEQAERYDEMVEAMKKVAKLD-------VELTVEERNLVSVGYKNVIGARRASWRILSSIEQKE-EA--KGNE 77 (237)
Q Consensus 8 l~~~AklaeqaeRy~Dm~~~mK~vi~~~-------~eLt~EERnLLSvAyKn~i~~~R~s~R~l~sieqk~-e~--~~~~ 77 (237)
+..+|.+....|+|+++..++++++... .+....-...++.+|-. .+....|...+....+.. .. ....
T Consensus 72 ~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~-~g~~~~A~~~~~~a~~~~~~~~~~~~~ 150 (311)
T 3nf1_A 72 LNILALVYRDQNKYKDAANLLNDALAIREKTLGKDHPAVAATLNNLAVLYGK-RGKYKEAEPLCKRALEIREKVLGKDHP 150 (311)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHT-TTCHHHHHHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHH-cCcHHHHHHHHHHHHHHHHHhcCCCCh
Confidence 4567888888999999999999988652 12222233344444432 344455555554322211 10 0011
Q ss_pred hHH----HHHHHH-HHHHHHHHHHHHHHHHHHhhhccCCCCCCChhHHHHHHHhcCcccchhhccCcchHHHHHHHHHHH
Q 026544 78 QNV----KRIKEY-RQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKA 152 (237)
Q Consensus 78 ~~~----~~i~~y-k~kIe~EL~~iC~eii~lID~~Lip~~~~~eskVFy~KmKGDyyRYlaE~~~~~~~~~~~~~A~~a 152 (237)
... ....-| ...=-++-.......+.+.....-+. .......+-..|..|... |+ .+.|...
T Consensus 151 ~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~---~~~~~~~~~~la~~~~~~-----g~-----~~~A~~~ 217 (311)
T 3nf1_A 151 DVAKQLNNLALLCQNQGKYEEVEYYYQRALEIYQTKLGPD---DPNVAKTKNNLASCYLKQ-----GK-----FKQAETL 217 (311)
T ss_dssp HHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTSCTT---CHHHHHHHHHHHHHHHHH-----TC-----HHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCCC---CHHHHHHHHHHHHHHHHc-----CC-----HHHHHHH
Confidence 100 000111 00001233344455555544322111 222333334444444322 11 2468888
Q ss_pred HHHHHHHHhc-----------------------------------------cCCCCCchhHHHHHHHHHHHHHHhcCccH
Q 026544 153 YEAATAAAAS-----------------------------------------ELPPTHPIRLGLALNFSVFYYEILNSPER 191 (237)
Q Consensus 153 Y~~A~~iA~~-----------------------------------------~L~pt~PirLGLaLN~SVF~yEIl~~~~~ 191 (237)
|++|++++.. .....+|-......+.+..|. -+++.++
T Consensus 218 ~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~la~~~~-~~g~~~~ 296 (311)
T 3nf1_A 218 YKEILTRAHEREFGSVDDENKPIWMHAEEREECKGKQKDGTSFGEYGGWYKACKVDSPTVTTTLKNLGALYR-RQGKFEA 296 (311)
T ss_dssp HHHHHHHHHHHHHC------CCHHHHHHHHHHC-------CCSCCCC---------CHHHHHHHHHHHHHHH-HHTCHHH
T ss_pred HHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHhcCchhhHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHH-HCCCHHH
Confidence 8888876532 112245666666666665554 5699999
Q ss_pred HHHHHHHHhHHH
Q 026544 192 LTCIFLFLSRQT 203 (237)
Q Consensus 192 ~A~~iA~~~~~~ 203 (237)
|....+++++-
T Consensus 297 -A~~~~~~al~l 307 (311)
T 3nf1_A 297 -AETLEEAAMRS 307 (311)
T ss_dssp -HHHHHHHHHHH
T ss_pred -HHHHHHHHHHH
Confidence 99887777653
No 117
>2r17_C Vacuolar protein sorting-associated protein 35; protein transport, membrane, phosphorylation; 2.80A {Homo sapiens}
Probab=29.53 E-value=30 Score=30.76 Aligned_cols=39 Identities=23% Similarity=0.432 Sum_probs=32.0
Q ss_pred HHHHHHHHHHHHHHhccCCCCCchhHHH---HHHHHHHHHHHhc
Q 026544 147 DHSLKAYEAATAAAASELPPTHPIRLGL---ALNFSVFYYEILN 187 (237)
Q Consensus 147 ~~A~~aY~~A~~iA~~~L~pt~PirLGL---aLN~SVF~yEIl~ 187 (237)
++.++|-++|+.+|...+.|. ..+.| +||..+||||--+
T Consensus 212 krVleCLqkaLkiA~~~~d~~--~~v~LfveILn~ylyff~~g~ 253 (298)
T 2r17_C 212 KRVMECLKKALKIANQCMDPS--LQVQLFIEILNRYIYFYEKEN 253 (298)
T ss_dssp HHHHHHHHHHHHHHHHSCCHH--HHHHHHHHHHHHHHHHHTTTC
T ss_pred HHHHHHHHHHHHHHHHHhChh--hHHHHHHHHHHHHHhhhhCCC
Confidence 579999999999998877755 45555 8999999999855
No 118
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=29.09 E-value=1.2e+02 Score=20.30 Aligned_cols=33 Identities=9% Similarity=-0.028 Sum_probs=27.8
Q ss_pred HhhHHHHHHHHHHhcCHHHHHHHHHHHhhcCCC
Q 026544 5 REHHVYLARLAEQAERYDEMVEAMKKVAKLDVE 37 (237)
Q Consensus 5 reel~~~AklaeqaeRy~Dm~~~mK~vi~~~~e 37 (237)
-..+..+|....+.|+|++++.++++++...+.
T Consensus 16 ~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~ 48 (133)
T 2lni_A 16 ALMVKNKGNECFQKGDYPQAMKHYTEAIKRNPK 48 (133)
T ss_dssp HHHHHHHHHHHHHTTCSHHHHHHHHHHHTTCTT
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC
Confidence 356778899999999999999999999876553
No 119
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=28.53 E-value=2.4e+02 Score=23.07 Aligned_cols=51 Identities=6% Similarity=-0.239 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHHHHhccCCCCCchhHHHHHHHHHHHHHHhcCccHHHHHHHHHhH
Q 026544 147 DHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERLTCIFLFLSR 201 (237)
Q Consensus 147 ~~A~~aY~~A~~iA~~~L~pt~PirLGLaLN~SVF~yEIl~~~~~~A~~iA~~~~ 201 (237)
+.|...|++|+++.... +. +...+.++.-....|--+++.++ |....++++
T Consensus 172 ~~A~~~~~~al~~~~~~-~~--~~~~~~~~~~~g~~~~~~g~~~~-A~~~~~~al 222 (307)
T 2ifu_A 172 DEAAASLQKEKSMYKEM-EN--YPTCYKKCIAQVLVQLHRADYVA-AQKCVRESY 222 (307)
T ss_dssp HHHHHHHHHHHHHHHHT-TC--HHHHHHHHHHHHHHHHHTTCHHH-HHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHc-CC--hhHHHHHHHHHHHHHHHcCCHHH-HHHHHHHHh
Confidence 56999999999988542 22 22334344444555666799999 888666554
No 120
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=27.74 E-value=1.4e+02 Score=20.06 Aligned_cols=48 Identities=13% Similarity=0.121 Sum_probs=32.1
Q ss_pred HHHHHHHHHHHHHHhccCCCCCchhHHHHHHHHHHHHHHhcCccHHHHHHHHHhHHHH
Q 026544 147 DHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERLTCIFLFLSRQTL 204 (237)
Q Consensus 147 ~~A~~aY~~A~~iA~~~L~pt~PirLGLaLN~SVF~yEIl~~~~~~A~~iA~~~~~~~ 204 (237)
+.|...|++|+++ .|.+|. ...|.+.. |.-+++.++ |+...+.+++-.
T Consensus 24 ~~A~~~~~~al~~-----~p~~~~---a~~~lg~~-~~~~g~~~~-A~~~~~~al~l~ 71 (100)
T 3ma5_A 24 SRALALFEELVET-----DPDYVG---TYYHLGKL-YERLDRTDD-AIDTYAQGIEVA 71 (100)
T ss_dssp HHHHHHHHHHHHH-----STTCTH---HHHHHHHH-HHHTTCHHH-HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----CCCcHH---HHHHHHHH-HHHcCCHHH-HHHHHHHHHhhh
Confidence 4688888888865 344443 34445444 456799999 998877776543
No 121
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=27.70 E-value=2.7e+02 Score=23.31 Aligned_cols=175 Identities=7% Similarity=0.030 Sum_probs=87.2
Q ss_pred HHHHHHHHHhcCHHHHHHHHHHHhhcCCCCCHH-----HHHHHHhhhhhhccchhhHHHHHHh-HhhhhhhhCchhHHHH
Q 026544 9 VYLARLAEQAERYDEMVEAMKKVAKLDVELTVE-----ERNLVSVGYKNVIGARRASWRILSS-IEQKEEAKGNEQNVKR 82 (237)
Q Consensus 9 ~~~AklaeqaeRy~Dm~~~mK~vi~~~~eLt~E-----ERnLLSvAyKn~i~~~R~s~R~l~s-ieqk~e~~~~~~~~~~ 82 (237)
.+++...-..|+|++++.+.++.....+....+ =..-++.+|-. .+....|...+.. ++-.....+.......
T Consensus 105 ~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~y~~-~~~~~~A~~~~~~al~~~~~~~~~~~~~~~ 183 (378)
T 3q15_A 105 FFRGMYEFDQKEYVEAIGYYREAEKELPFVSDDIEKAEFHFKVAEAYYH-MKQTHVSMYHILQALDIYQNHPLYSIRTIQ 183 (378)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHTTGGGCCCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHTSTTCHHHHHH
T ss_pred HHHHHHHHHHCCHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHH-cCCcHHHHHHHHHHHHHHHhCCCchhhHHH
Confidence 356777778899999999999988764333221 12233444432 3333344443321 1111110010110000
Q ss_pred H-----HHH-HHHHHHHHHHHHHHHHHHhhhccCCCCCCChhHHHHHHHhcCcccchhhccCcchHHHHHHHHHHHHHHH
Q 026544 83 I-----KEY-RQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKAYEAA 156 (237)
Q Consensus 83 i-----~~y-k~kIe~EL~~iC~eii~lID~~Lip~~~~~eskVFy~KmKGDyyRYlaE~~~~~~~~~~~~~A~~aY~~A 156 (237)
+ .-| ...=-++-...+...+++.... .++......+--.|..|.-+ | --+.|...|++|
T Consensus 184 ~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~-----~~~~~~~~~~~~lg~~y~~~-----~-----~~~~A~~~~~~a 248 (378)
T 3q15_A 184 SLFVIAGNYDDFKHYDKALPHLEAALELAMDI-----QNDRFIAISLLNIANSYDRS-----G-----DDQMAVEHFQKA 248 (378)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT-----TCHHHHHHHHHHHHHHHHHH-----T-----CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHc-----CCHHHHHHHHHHHHHHHHHC-----C-----CHHHHHHHHHHH
Confidence 0 000 0000122333444455544321 22223333333445444322 1 135699999999
Q ss_pred HHHHhccCCCCCchhHHHHHHHHHHHHHHhcCccHHHHHHHHHhHHHH
Q 026544 157 TAAAASELPPTHPIRLGLALNFSVFYYEILNSPERLTCIFLFLSRQTL 204 (237)
Q Consensus 157 ~~iA~~~L~pt~PirLGLaLN~SVF~yEIl~~~~~~A~~iA~~~~~~~ 204 (237)
+++++..- +|.......|.+.. |.-+++.++ |....+++++-+
T Consensus 249 l~~~~~~~---~~~~~~~~~~la~~-~~~~g~~~~-A~~~~~~al~~~ 291 (378)
T 3q15_A 249 AKVSREKV---PDLLPKVLFGLSWT-LCKAGQTQK-AFQFIEEGLDHI 291 (378)
T ss_dssp HHHHHHHC---GGGHHHHHHHHHHH-HHHTTCHHH-HHHHHHHHHHHC
T ss_pred HHHHHhhC---ChhHHHHHHHHHHH-HHHCCCHHH-HHHHHHHHHHHH
Confidence 99986543 34443344455444 456799999 999988887754
No 122
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=27.51 E-value=1.6e+02 Score=23.33 Aligned_cols=53 Identities=11% Similarity=0.002 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHHHHhccCCCCCchhH-----HHHHHHHHHHHHHhcCccHHHHHHHHHhHH
Q 026544 147 DHSLKAYEAATAAAASELPPTHPIRL-----GLALNFSVFYYEILNSPERLTCIFLFLSRQ 202 (237)
Q Consensus 147 ~~A~~aY~~A~~iA~~~L~pt~PirL-----GLaLN~SVF~yEIl~~~~~~A~~iA~~~~~ 202 (237)
+.|..+|++|+++.-. .|+..++.+ ..-.|-+.-+. -+++.++ |+..+..++.
T Consensus 28 eeAi~~Y~kAL~l~p~-~~~~~a~~~~~~~a~a~~n~g~al~-~Lgr~~e-Al~~~~kAL~ 85 (159)
T 2hr2_A 28 DEAAANCRRAMEISHT-MPPEEAFDHAGFDAFCHAGLAEALA-GLRSFDE-ALHSADKALH 85 (159)
T ss_dssp HHHHHHHHHHHHHHTT-SCTTSCCCHHHHHHHHHHHHHHHHH-HTTCHHH-HHHHHHHHHH
T ss_pred HHHHHHHHHHHhhCCC-CcchhhhhhccchHHHHHHHHHHHH-HCCCHHH-HHHHHHHHHH
Confidence 5699999999998743 332223332 26666665544 4699999 9887777765
No 123
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=26.82 E-value=1.3e+02 Score=22.64 Aligned_cols=58 Identities=19% Similarity=0.205 Sum_probs=40.1
Q ss_pred hHHHHHHHHHHhcCHHHHHHHHHHHhhcCCCCCHHHHHHHHhhhhhhccchhhHHHHHHh
Q 026544 7 HHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSS 66 (237)
Q Consensus 7 el~~~AklaeqaeRy~Dm~~~mK~vi~~~~eLt~EERnLLSvAyKn~i~~~R~s~R~l~s 66 (237)
-+..+|.+..+.|+|++++.+..+++..+|. +..=...+..+|-. .+....|...+..
T Consensus 90 ~~~~la~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~-~~~~~~A~~~~~~ 147 (198)
T 2fbn_A 90 CNLNLATCYNKNKDYPKAIDHASKVLKIDKN-NVKALYKLGVANMY-FGFLEEAKENLYK 147 (198)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHH-HTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHhCcc-cHHHHHHHHHHHHH-cccHHHHHHHHHH
Confidence 4456788888899999999999999987654 34445556666633 4555566666543
No 124
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=26.66 E-value=1.4e+02 Score=21.62 Aligned_cols=27 Identities=11% Similarity=0.041 Sum_probs=14.7
Q ss_pred HHHHHHHHhcCHHHHHHHHHHHhhcCC
Q 026544 10 YLARLAEQAERYDEMVEAMKKVAKLDV 36 (237)
Q Consensus 10 ~~AklaeqaeRy~Dm~~~mK~vi~~~~ 36 (237)
.++.+..+.|+|++++.+.++++..+|
T Consensus 50 ~l~~~~~~~g~~~~A~~~~~~al~~~p 76 (164)
T 3sz7_A 50 NRAAAYSASGQHEKAAEDAELATVVDP 76 (164)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHccCHHHHHHHHHHHHHhCC
Confidence 444555555555555555555555444
No 125
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=26.21 E-value=1.9e+02 Score=21.03 Aligned_cols=19 Identities=5% Similarity=0.186 Sum_probs=8.5
Q ss_pred hcCHHHHHHHHHHHhhcCC
Q 026544 18 AERYDEMVEAMKKVAKLDV 36 (237)
Q Consensus 18 aeRy~Dm~~~mK~vi~~~~ 36 (237)
.|+|++++..+++++..+|
T Consensus 23 ~~~~~~A~~~~~~al~~~p 41 (177)
T 2e2e_A 23 QQNPEAQLQALQDKIRANP 41 (177)
T ss_dssp ----CCCCHHHHHHHHHCC
T ss_pred ccCHHHHHHHHHHHHHhCC
Confidence 4555666666666555443
No 126
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=25.28 E-value=1.1e+02 Score=21.15 Aligned_cols=59 Identities=19% Similarity=0.053 Sum_probs=42.2
Q ss_pred hHHHHHHHHHHhcCHHHHHHHHHHHhhcCCCCCHHHHHHHHhhhhhhccchhhHHHHHHhH
Q 026544 7 HHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSI 67 (237)
Q Consensus 7 el~~~AklaeqaeRy~Dm~~~mK~vi~~~~eLt~EERnLLSvAyKn~i~~~R~s~R~l~si 67 (237)
-+..+|.+..+.|+|++++.+.++++...|.- .+-...+..+|-. .+....|...+...
T Consensus 67 ~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~-~~~~~~~a~~~~~-~~~~~~A~~~~~~a 125 (148)
T 2dba_A 67 LHRNRAACHLKLEDYDKAETEASKAIEKDGGD-VKALYRRSQALEK-LGRLDQAVLDLQRC 125 (148)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHTSCC-HHHHHHHHHHHHH-HTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHccHHHHHHHHHHHHhhCccC-HHHHHHHHHHHHH-cCCHHHHHHHHHHH
Confidence 35567888889999999999999999876653 4555566666644 45566666666543
No 127
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=25.18 E-value=1.6e+02 Score=21.59 Aligned_cols=32 Identities=22% Similarity=0.192 Sum_probs=26.6
Q ss_pred hhHHHHHHHHHHhcCHHHHHHHHHHHhhcCCC
Q 026544 6 EHHVYLARLAEQAERYDEMVEAMKKVAKLDVE 37 (237)
Q Consensus 6 eel~~~AklaeqaeRy~Dm~~~mK~vi~~~~e 37 (237)
+-+..+|....+.|+|++++...++++..+|.
T Consensus 22 ~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~ 53 (148)
T 2vgx_A 22 EQLYSLAFNQYQSGXYEDAHXVFQALCVLDHY 53 (148)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHcCChHHHHHHHHHHHHcCcc
Confidence 34566788889999999999999999887654
No 128
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=25.02 E-value=78 Score=23.33 Aligned_cols=56 Identities=13% Similarity=0.006 Sum_probs=37.8
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHhhcCCCCCHHHHHHHHhhhhhhccchhhHHHHHH
Q 026544 8 HVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILS 65 (237)
Q Consensus 8 l~~~AklaeqaeRy~Dm~~~mK~vi~~~~eLt~EERnLLSvAyKn~i~~~R~s~R~l~ 65 (237)
...++.+..+.|+|++++.+.++++..+|.-. +=...+..+|-. .+....|...+.
T Consensus 58 ~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~-~~~~~lg~~~~~-~g~~~~A~~~~~ 113 (148)
T 2vgx_A 58 FLGLGACRQAMGQYDLAIHSYSYGAVMDIXEP-RFPFHAAECLLQ-XGELAEAESGLF 113 (148)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCT-HHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCc-hHHHHHHHHHHH-cCCHHHHHHHHH
Confidence 45678888999999999999999998876543 333344555533 444555555553
No 129
>1tdp_A Carnobacteriocin B2 immunity protein; four-helix bundle, antimicrobial protein; NMR {Carnobacterium maltaromaticum} SCOP: a.29.8.1
Probab=25.01 E-value=2e+02 Score=21.90 Aligned_cols=66 Identities=17% Similarity=0.184 Sum_probs=40.1
Q ss_pred HHHHhhhhhhccchhhHHHHHHhHhhhhhhhCchhHHHHHHHHHHHHHH-H----HHHHHHHHHHHhhhccCCCCC-CCh
Q 026544 44 NLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVED-E----LAKICNDILSVIDEHLIPSST-SGE 117 (237)
Q Consensus 44 nLLSvAyKn~i~~~R~s~R~l~sieqk~e~~~~~~~~~~i~~yk~kIe~-E----L~~iC~eii~lID~~Lip~~~-~~e 117 (237)
+++|+||+. ++.+.++.-.+.|.++-+++.+ + ...+|..+-..|-++++-+.. -|+
T Consensus 10 ~~lS~AY~D------------------peVk~~p~Lr~~lf~~Ak~L~~~~d~~~y~~V~~KLs~~IS~Y~l~hh~~~P~ 71 (111)
T 1tdp_A 10 LNLSEAYKD------------------PEVKANEFLSKLVVQCAGKLTASNSENSYIEVISLLSRGISSYYLSHKRIIPS 71 (111)
T ss_dssp HHHHHHHTC------------------HHHHSCHHHHHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHTCTTSCCCCCG
T ss_pred HHHHHHhCC------------------HhhhcCHHHHHHHHHHHHHhccCCCcchhHhHHHHHHhHHHHHHHHhcccCcH
Confidence 567888876 3344555556666777666654 3 566777777777777766543 344
Q ss_pred hH-HHHHHHhc
Q 026544 118 ST-VFYYKMKG 127 (237)
Q Consensus 118 sk-VFy~KmKG 127 (237)
+- ..|...+.
T Consensus 72 ali~L~~~I~k 82 (111)
T 1tdp_A 72 SMLTIYTQIQK 82 (111)
T ss_dssp GGTHHHHHHHH
T ss_pred HHHHHHHHHhc
Confidence 33 34444444
No 130
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=24.96 E-value=2e+02 Score=20.95 Aligned_cols=73 Identities=8% Similarity=-0.056 Sum_probs=49.4
Q ss_pred hHHHHHHHhcCcccchhhccCcchHHHHHHHHHHHHHHHHHHHhccCCCCCchhHHHHHHHHHHHHHHhcCccHHHHHHH
Q 026544 118 STVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERLTCIFL 197 (237)
Q Consensus 118 skVFy~KmKGDyyRYlaE~~~~~~~~~~~~~A~~aY~~A~~iA~~~L~pt~PirLGLaLN~SVF~yEIl~~~~~~A~~iA 197 (237)
.....+-..|..+..+ |+ .+.|...+++|++++.. ..+|...+.+++.-...|.-.++.++ |....
T Consensus 105 ~~~~~~~~lg~~~~~~-----g~-----~~~A~~~~~~al~~~~~---~~~~~~~~~~~~~la~~~~~~g~~~~-A~~~~ 170 (203)
T 3gw4_A 105 AASANAYEVATVALHF-----GD-----LAGARQEYEKSLVYAQQ---ADDQVAIACAFRGLGDLAQQEKNLLE-AQQHW 170 (203)
T ss_dssp HHHHHHHHHHHHHHHH-----TC-----HHHHHHHHHHHHHHHHH---TTCHHHHHHHHHHHHHHHHHTTCHHH-HHHHH
T ss_pred HHHHHHHHHHHHHHHh-----CC-----HHHHHHHHHHHHHHHHh---ccchHHHHHHHHHHHHHHHHCcCHHH-HHHHH
Confidence 4455555556555433 11 35689999999998853 23466666666666666777899999 99988
Q ss_pred HHhHHHH
Q 026544 198 FLSRQTL 204 (237)
Q Consensus 198 ~~~~~~~ 204 (237)
.++++-+
T Consensus 171 ~~al~~~ 177 (203)
T 3gw4_A 171 LRARDIF 177 (203)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 8887765
No 131
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=24.96 E-value=78 Score=23.33 Aligned_cols=30 Identities=17% Similarity=0.164 Sum_probs=19.8
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHhhcCCC
Q 026544 8 HVYLARLAEQAERYDEMVEAMKKVAKLDVE 37 (237)
Q Consensus 8 l~~~AklaeqaeRy~Dm~~~mK~vi~~~~e 37 (237)
...++.+..+.|+|++++++.+++++.+|.
T Consensus 110 ~~~lg~~~~~~g~~~~A~~~~~~~l~~~p~ 139 (184)
T 3vtx_A 110 YYKLGLVYDSMGEHDKAIEAYEKTISIKPG 139 (184)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHhCCchhHHHHHHHHHHhcch
Confidence 445666666777777777777777665543
No 132
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=24.84 E-value=84 Score=22.31 Aligned_cols=27 Identities=19% Similarity=0.150 Sum_probs=20.6
Q ss_pred hHHHHHHHHHHhcCHHHHHHHHHHHhh
Q 026544 7 HHVYLARLAEQAERYDEMVEAMKKVAK 33 (237)
Q Consensus 7 el~~~AklaeqaeRy~Dm~~~mK~vi~ 33 (237)
+++.+|=-.+++|+|++++.+.++.++
T Consensus 21 ~lv~~Ave~D~~g~y~eAl~lY~~aie 47 (83)
T 2w2u_A 21 KYAINAVKADKEGNAEEAITNYKKAIE 47 (83)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 345555556889999999998888774
No 133
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=24.24 E-value=1.7e+02 Score=19.73 Aligned_cols=47 Identities=13% Similarity=-0.080 Sum_probs=31.2
Q ss_pred HHHHHHHHHHHHHHhccCCCCCchhHHHHHHHHHHHHHHhcCccHHHHHHHHHhHHH
Q 026544 147 DHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERLTCIFLFLSRQT 203 (237)
Q Consensus 147 ~~A~~aY~~A~~iA~~~L~pt~PirLGLaLN~SVF~yEIl~~~~~~A~~iA~~~~~~ 203 (237)
+.|...|++|+++ .|.+|- ...|.+..+ .-+++.++ |....+.+++-
T Consensus 36 ~~A~~~~~~al~~-----~p~~~~---~~~~la~~~-~~~g~~~~-A~~~~~~al~~ 82 (115)
T 2kat_A 36 DAALPHLRAALDF-----DPTYSV---AWKWLGKTL-QGQGDRAG-ARQAWESGLAA 82 (115)
T ss_dssp HHHHHHHHHHHHH-----CTTCHH---HHHHHHHHH-HHHTCHHH-HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-----CCCcHH---HHHHHHHHH-HHcCCHHH-HHHHHHHHHHh
Confidence 4588889988864 344432 334555544 44799999 99887777654
No 134
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=23.51 E-value=1.3e+02 Score=19.71 Aligned_cols=60 Identities=18% Similarity=0.170 Sum_probs=42.5
Q ss_pred hHHHHHHHHHHhcCHHHHHHHHHHHhhcCCCCCHHHHHHHHhhhhhhccchhhHHHHHHhHh
Q 026544 7 HHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIE 68 (237)
Q Consensus 7 el~~~AklaeqaeRy~Dm~~~mK~vi~~~~eLt~EERnLLSvAyKn~i~~~R~s~R~l~sie 68 (237)
-+..+|.+....|+|++++.+.++++...|. +.+-...+..+|.. .+....++..+....
T Consensus 45 ~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~la~~~~~-~~~~~~A~~~~~~~~ 104 (125)
T 1na0_A 45 AWYNLGNAYYKQGDYDEAIEYYQKALELDPN-NAEAWYNLGNAYYK-QGDYDEAIEYYQKAL 104 (125)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHH-TTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHhCCc-cHHHHHHHHHHHHH-hcCHHHHHHHHHHHH
Confidence 3557788888999999999999999887654 34444556666643 466667777775443
No 135
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=23.50 E-value=2.1e+02 Score=23.31 Aligned_cols=54 Identities=11% Similarity=-0.167 Sum_probs=36.9
Q ss_pred HHHHHHHHHHHHHHhccCCCCCchhHHHHHHHHHHHHHH-hcCccHHHHHHHHHhHHHH
Q 026544 147 DHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEI-LNSPERLTCIFLFLSRQTL 204 (237)
Q Consensus 147 ~~A~~aY~~A~~iA~~~L~pt~PirLGLaLN~SVF~yEI-l~~~~~~A~~iA~~~~~~~ 204 (237)
+.|..+|++|+++... . -+|...+-+++----.|+- +++.++ |+..-+++++-.
T Consensus 94 ~~A~~~~~~Al~l~~~-~--g~~~~~a~~~~~lg~~~~~~lg~~~~-A~~~~~~Al~~~ 148 (292)
T 1qqe_A 94 VNAVDSLENAIQIFTH-R--GQFRRGANFKFELGEILENDLHDYAK-AIDCYELAGEWY 148 (292)
T ss_dssp HHHHHHHHHHHHHHHH-T--TCHHHHHHHHHHHHHHHHHTTCCHHH-HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH-c--CCHHHHHHHHHHHHHHHHHhhcCHHH-HHHHHHHHHHHH
Confidence 4699999999998753 2 3455555555443344555 599999 998888777643
No 136
>2efl_A Formin-binding protein 1; EFC domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.61A {Homo sapiens} SCOP: a.238.1.4
Probab=23.41 E-value=1.9e+02 Score=24.00 Aligned_cols=12 Identities=0% Similarity=-0.355 Sum_probs=8.5
Q ss_pred ccchhhHHHHHH
Q 026544 54 IGARRASWRILS 65 (237)
Q Consensus 54 i~~~R~s~R~l~ 65 (237)
.++.+.+|..+.
T Consensus 71 ~~t~~~aw~~~~ 82 (305)
T 2efl_A 71 KYTSCKAFISNL 82 (305)
T ss_dssp TSHHHHHHHHHH
T ss_pred cccHHHHHHHHH
Confidence 346678898874
No 137
>2lbb_A Acyl COA binding protein; protein binding, structural genomi seattle structural genomics center for infectious disease,; NMR {Babesia bovis}
Probab=23.25 E-value=1.3e+02 Score=22.10 Aligned_cols=35 Identities=14% Similarity=0.235 Sum_probs=28.3
Q ss_pred hcCHHHHHHHHHHHhhcCCCCCHHHHHHHHhhhhhhc
Q 026544 18 AERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVI 54 (237)
Q Consensus 18 aeRy~Dm~~~mK~vi~~~~eLt~EERnLLSvAyKn~i 54 (237)
+++|+.+++.++.+-. ..++.+++-.|-.-||...
T Consensus 11 ~~~F~~A~~~vk~l~~--~~ps~~~~L~LYaLyKQAt 45 (96)
T 2lbb_A 11 ADDFDAAVKYVSNTTT--MMASNDDKLCFYKYYKQAT 45 (96)
T ss_dssp SSTHHHHHHHHHHCCC--SCCCTTTTTHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhCCC--CCCCHHHHHHHHHHHHHHh
Confidence 6889999999988642 5788999988888888764
No 138
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=23.17 E-value=1.6e+02 Score=20.86 Aligned_cols=27 Identities=11% Similarity=0.086 Sum_probs=22.3
Q ss_pred hHHHHHHHHHHhcCHHHHHHHHHHHhh
Q 026544 7 HHVYLARLAEQAERYDEMVEAMKKVAK 33 (237)
Q Consensus 7 el~~~AklaeqaeRy~Dm~~~mK~vi~ 33 (237)
+++-.|--.+++|+|++++.+-++.++
T Consensus 18 ~lv~~Ave~D~~g~y~eAl~lY~~Aie 44 (86)
T 4a5x_A 18 TVLKRAVELDSESRYPQALVCYQEGID 44 (86)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 466667677899999999999988875
No 139
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=23.11 E-value=68 Score=28.13 Aligned_cols=54 Identities=11% Similarity=0.106 Sum_probs=38.7
Q ss_pred HHHHHHHHHHHHHHhcc--------CCCCCchhHHHHHHHHHHHHHHhcCccHHHHHHHHHhHH
Q 026544 147 DHSLKAYEAATAAAASE--------LPPTHPIRLGLALNFSVFYYEILNSPERLTCIFLFLSRQ 202 (237)
Q Consensus 147 ~~A~~aY~~A~~iA~~~--------L~pt~PirLGLaLN~SVF~yEIl~~~~~~A~~iA~~~~~ 202 (237)
+.|...|++|+++.... ....+|....+.+|.+..++ -+++.++ |+..+..+++
T Consensus 240 ~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~-~~g~~~~-A~~~~~~al~ 301 (370)
T 1ihg_A 240 EMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKL-KMSDWQG-AVDSCLEALE 301 (370)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHH-HTTCHHH-HHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHH-hccCHHH-HHHHHHHHHH
Confidence 46888888888865331 11156777788888888776 4688899 8888777765
No 140
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=22.92 E-value=2.6e+02 Score=21.50 Aligned_cols=44 Identities=16% Similarity=0.107 Sum_probs=32.6
Q ss_pred hHHHHHHHHHHhcCHHHHHHHHHHHhhcCCCCCHHHHHHHHhhhh
Q 026544 7 HHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYK 51 (237)
Q Consensus 7 el~~~AklaeqaeRy~Dm~~~mK~vi~~~~eLt~EERnLLSvAyK 51 (237)
-+..+|.+..+.|++++++..++++++.+|.- .+-...+..+|.
T Consensus 41 a~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~-~~a~~~lg~~~~ 84 (217)
T 2pl2_A 41 ALYWLARTQLKLGLVNPALENGKTLVARTPRY-LGGYMVLSEAYV 84 (217)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCc-HHHHHHHHHHHH
Confidence 35578888899999999999999999887764 334444444443
No 141
>3iyk_A VP5; icosahedral virus; HET: MNA; 7.00A {Bluetongue virus}
Probab=22.66 E-value=3.1e+02 Score=26.25 Aligned_cols=74 Identities=18% Similarity=0.394 Sum_probs=46.8
Q ss_pred hcCHHHHHHHHHHHhhcCCCCCHHHH---HHHH---hhhhhhccchhhHHHHHHhHhhhhhhhCchhHHHHHHHHHHHHH
Q 026544 18 AERYDEMVEAMKKVAKLDVELTVEER---NLVS---VGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVE 91 (237)
Q Consensus 18 aeRy~Dm~~~mK~vi~~~~eLt~EER---nLLS---vAyKn~i~~~R~s~R~l~sieqk~e~~~~~~~~~~i~~yk~kIe 91 (237)
.++|.+-++-+++++........+|. .+|- .+|..++..-+..+..|..--++|+..-+.+-...+++||.++.
T Consensus 120 ~~k~g~~l~~v~~~~~~~~~~e~~e~~q~~~LekAl~s~~~i~~~e~~~l~~L~~AL~kE~~~Rt~dE~~mi~~yr~k~~ 199 (526)
T 3iyk_A 120 KEKFGKELEEVYNFMNGEANAEIEDEKQFDILNKAVTSYNKILTEEDLQMRRLATALQKEIGERTHAETVMVKEYRDKID 199 (526)
T ss_pred HHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhcHHHHHHHHHHHHHHH
Confidence 35677777777777765445555444 4554 35566777777888887665666654434445677788877653
No 142
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=22.57 E-value=1e+02 Score=22.04 Aligned_cols=9 Identities=11% Similarity=0.172 Sum_probs=3.5
Q ss_pred HHHHHHHHH
Q 026544 149 SLKAYEAAT 157 (237)
Q Consensus 149 A~~aY~~A~ 157 (237)
|...|+.|+
T Consensus 105 A~~~~~~al 113 (142)
T 2xcb_A 105 AESGFYSAR 113 (142)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 333344333
No 143
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=22.12 E-value=3.2e+02 Score=22.28 Aligned_cols=53 Identities=11% Similarity=0.060 Sum_probs=31.9
Q ss_pred HHHHHHHHHHHHHHhccCCCCCchhHHHHHHHHHHHHHHhcCccHHHHHHHHHhHHH
Q 026544 147 DHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERLTCIFLFLSRQT 203 (237)
Q Consensus 147 ~~A~~aY~~A~~iA~~~L~pt~PirLGLaLN~SVF~yEIl~~~~~~A~~iA~~~~~~ 203 (237)
+.|..+|++|.++... +. +|...+-+++-.--.|.-+++.++ |+...+.+++-
T Consensus 53 ~~A~~~~~~al~~~~~-~~--~~~~~a~~~~~lg~~~~~~g~~~~-A~~~~~~Al~l 105 (307)
T 2ifu_A 53 EQAKDAYLQEAEAHAN-NR--SLFHAAKAFEQAGMMLKDLQRMPE-AVQYIEKASVM 105 (307)
T ss_dssp HHHHHHHHHHHHHHHH-TT--CHHHHHHHHHHHHHHHHHTTCGGG-GHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH-cC--CHHHHHHHHHHHHHHHHhCCCHHH-HHHHHHHHHHH
Confidence 4577777777777643 32 344445555555555666677777 77766665543
No 144
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=21.95 E-value=1.5e+02 Score=19.76 Aligned_cols=59 Identities=3% Similarity=-0.002 Sum_probs=42.5
Q ss_pred hHHHHHHHHHHhcCHHHHHHHHHHHhhcCCCCCHHHHHHHHhhhhhhccchhhHHHHHHhH
Q 026544 7 HHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSI 67 (237)
Q Consensus 7 el~~~AklaeqaeRy~Dm~~~mK~vi~~~~eLt~EERnLLSvAyKn~i~~~R~s~R~l~si 67 (237)
-+..+|.+..+.|+|++++.++++++..+|. +.+-...+..+|-. .+....|...+...
T Consensus 52 ~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~la~~~~~-~~~~~~A~~~~~~~ 110 (133)
T 2lni_A 52 LYSNRAACYTKLLEFQLALKDCEECIQLEPT-FIKGYTRKAAALEA-MKDYTKAMDVYQKA 110 (133)
T ss_dssp HHHHHHHHHTTTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHH-TTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHHhCCC-chHHHHHHHHHHHH-HhhHHHHHHHHHHH
Confidence 3567788888899999999999999987665 44555566666643 45666777776543
No 145
>3onj_A T-snare VTI1; helix, HABC, protein transport; 1.92A {Saccharomyces cerevisiae} PDB: 3onl_C
Probab=21.88 E-value=2.3e+02 Score=20.45 Aligned_cols=76 Identities=8% Similarity=0.142 Sum_probs=42.2
Q ss_pred HHHHHHHHHHHhhcCCCCCHHHHHHHHhhhhhhccchhhHHHHHHhHhhhhh--hh-CchhHHHHHHHHHHHHHHHHHHH
Q 026544 21 YDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEE--AK-GNEQNVKRIKEYRQRVEDELAKI 97 (237)
Q Consensus 21 y~Dm~~~mK~vi~~~~eLt~EERnLLSvAyKn~i~~~R~s~R~l~sieqk~e--~~-~~~~~~~~i~~yk~kIe~EL~~i 97 (237)
|.....-++..+..-+.++-++|+-.......-+..-..=++.+ .+|-+.- .. ........++.||..+.+||..-
T Consensus 10 f~~~~~~i~~~l~~~~~~~ge~Rk~~i~~ie~~ldEA~ell~qM-elE~~~~~~p~~~R~~~~~klr~Yk~dl~~~lk~~ 88 (97)
T 3onj_A 10 FKTTLEQAKASLAEAPSQPLSQRNTTLKHVEQQQDELFDLLDQM-DVEVNNSIGDASERATYKAKLREWKKTIQSDIKRP 88 (97)
T ss_dssp HHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHTHHH
T ss_pred HHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444445454544567888899877777777666443333332 2232221 10 01234577889988877766553
No 146
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=21.73 E-value=1.7e+02 Score=24.23 Aligned_cols=53 Identities=13% Similarity=0.007 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHhccCCCCCchhHHHHHHHHHHHHHHhcCccHHHHHHHHHhHHHH
Q 026544 147 DHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERLTCIFLFLSRQTL 204 (237)
Q Consensus 147 ~~A~~aY~~A~~iA~~~L~pt~PirLGLaLN~SVF~yEIl~~~~~~A~~iA~~~~~~~ 204 (237)
+.|...+++|++.. |+.+|...+.+++.--..|-..++.++ |.....++.+-+
T Consensus 31 ~~A~~~~~~al~~~----~~~~~~~~~~~~~~l~~~~~~~g~~~~-A~~~~~~al~~~ 83 (373)
T 1hz4_A 31 DEAERLAKLALEEL----PPGWFYSRIVATSVLGEVLHCKGELTR-SLALMQQTEQMA 83 (373)
T ss_dssp HHHHHHHHHHHHTC----CTTCHHHHHHHHHHHHHHHHHHTCHHH-HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcC----CCCchhHHHHHHHHHHHHHHhcCcHHH-HHHHHHHHHHHH
No 147
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=21.25 E-value=96 Score=23.99 Aligned_cols=26 Identities=19% Similarity=0.166 Sum_probs=19.9
Q ss_pred HHHHHHHhcCHHHHHHHHHHHhhcCC
Q 026544 11 LARLAEQAERYDEMVEAMKKVAKLDV 36 (237)
Q Consensus 11 ~AklaeqaeRy~Dm~~~mK~vi~~~~ 36 (237)
+|.+..+.|+|++++.+.+++++.+|
T Consensus 60 lg~~~~~~g~~~~A~~~~~~al~~~p 85 (208)
T 3urz_A 60 LALAYKKNRNYDKAYLFYKELLQKAP 85 (208)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHCC
Confidence 67777778888888888888876654
No 148
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=21.15 E-value=1.1e+02 Score=21.53 Aligned_cols=27 Identities=19% Similarity=0.245 Sum_probs=20.5
Q ss_pred hHHHHHHHHHHhcCHHHHHHHHHHHhh
Q 026544 7 HHVYLARLAEQAERYDEMVEAMKKVAK 33 (237)
Q Consensus 7 el~~~AklaeqaeRy~Dm~~~mK~vi~ 33 (237)
+++..|--.+++|+|++++.+.++.++
T Consensus 13 ~lv~~Ave~D~~g~y~eAl~lY~~aie 39 (83)
T 2v6y_A 13 KYAILAVKADKEGKVEDAITYYKKAIE 39 (83)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 355566566889999999998888764
No 149
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=20.77 E-value=2.3e+02 Score=21.05 Aligned_cols=46 Identities=11% Similarity=0.032 Sum_probs=32.1
Q ss_pred HHHHHHHHHHHHHHhccCCCCCchhHHHHHHHHHHHHHHhcCccHHHHHHHHHhHH
Q 026544 147 DHSLKAYEAATAAAASELPPTHPIRLGLALNFSVFYYEILNSPERLTCIFLFLSRQ 202 (237)
Q Consensus 147 ~~A~~aY~~A~~iA~~~L~pt~PirLGLaLN~SVF~yEIl~~~~~~A~~iA~~~~~ 202 (237)
+.|...|++|+++ .|.+| ....|.+..++. +++.++ |+...+.+++
T Consensus 54 ~~A~~~~~~al~~-----~~~~~---~~~~~lg~~~~~-~~~~~~-A~~~~~~al~ 99 (213)
T 1hh8_A 54 TEAEKAFTRSINR-----DKHLA---VAYFQRGMLYYQ-TEKYDL-AIKDLKEALI 99 (213)
T ss_dssp HHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHH-TTCHHH-HHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----Cccch---HHHHHHHHHHHH-cccHHH-HHHHHHHHHH
Confidence 4688899998875 24443 344566655554 699999 9988777766
No 150
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=20.53 E-value=1.2e+02 Score=19.98 Aligned_cols=31 Identities=16% Similarity=0.138 Sum_probs=25.6
Q ss_pred hhHHHHHHHHHHhcCHHHHHHHHHHHhhcCC
Q 026544 6 EHHVYLARLAEQAERYDEMVEAMKKVAKLDV 36 (237)
Q Consensus 6 eel~~~AklaeqaeRy~Dm~~~mK~vi~~~~ 36 (237)
+-+..+|.+....|+|++++.++++++...|
T Consensus 13 ~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~ 43 (131)
T 2vyi_A 13 ERLKTEGNEQMKVENFEAAVHFYGKAIELNP 43 (131)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHcCC
Confidence 3456788888899999999999999987644
No 151
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=20.51 E-value=2.1e+02 Score=25.47 Aligned_cols=49 Identities=10% Similarity=0.052 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHhccCCCCCc------------hhHHHHHHHHHHHHHHhcCccHHHHHHHHHhHH
Q 026544 147 DHSLKAYEAATAAAASELPPTHP------------IRLGLALNFSVFYYEILNSPERLTCIFLFLSRQ 202 (237)
Q Consensus 147 ~~A~~aY~~A~~iA~~~L~pt~P------------irLGLaLN~SVF~yEIl~~~~~~A~~iA~~~~~ 202 (237)
+.|...|++|+++. |.+| .+..+.+|.+..|+.. ++.++ |+.....+++
T Consensus 285 ~~A~~~y~~Al~~~-----p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~-g~~~~-A~~~~~~al~ 345 (457)
T 1kt0_A 285 MQAVIQYGKIVSWL-----EMEYGLSEKESKASESFLLAAFLNLAMCYLKL-REYTK-AVECCDKALG 345 (457)
T ss_dssp HHHHHHHHHHHHHH-----TTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHT-TCHHH-HHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh-----cccccCChHHHHHHHHHHHHHHHHHHHHHHHh-cCHHH-HHHHHHHHHh
No 152
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=20.44 E-value=2.3e+02 Score=19.80 Aligned_cols=59 Identities=14% Similarity=0.084 Sum_probs=41.0
Q ss_pred hHHHHHHHHHHhcCHHHHHHHHHHHhhcCCCCCHHHHHHHHhhhhhhccchhhHHHHHHhH
Q 026544 7 HHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSI 67 (237)
Q Consensus 7 el~~~AklaeqaeRy~Dm~~~mK~vi~~~~eLt~EERnLLSvAyKn~i~~~R~s~R~l~si 67 (237)
-+..+|.+..+.|+|++++.++++++..+|.. .+-...+..+|.. .+....|...+...
T Consensus 49 ~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~-~~~~~~~a~~~~~-~~~~~~A~~~~~~a 107 (166)
T 1a17_A 49 YYGNRSLAYLRTECYGYALGDATRAIELDKKY-IKGYYRRAASNMA-LGKFRAALRDYETV 107 (166)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHH-TTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCccc-HHHHHHHHHHHHH-hccHHHHHHHHHHH
Confidence 35677888888999999999999999876643 4445555655544 45566666666443
No 153
>1hbk_A ACBP, acyl-COA binding protein; fatty acid metabolism; HET: COA MYR; 2.0A {Plasmodium falciparum} SCOP: a.11.1.1
Probab=20.24 E-value=2.4e+02 Score=20.06 Aligned_cols=35 Identities=17% Similarity=0.242 Sum_probs=26.5
Q ss_pred cCHHHHHHHHHHHhhcCCCCCHHHHHHHHhhhhhhc
Q 026544 19 ERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVI 54 (237)
Q Consensus 19 eRy~Dm~~~mK~vi~~~~eLt~EERnLLSvAyKn~i 54 (237)
++|+.+++.++.+-. ...++.+++-.|=.-||..+
T Consensus 4 ~~F~~A~~~v~~l~~-~~~~~~~~~L~LYalyKQAt 38 (89)
T 1hbk_A 4 QVFEECVSFINGLPR-TINLPNELKLDLYKYYKQST 38 (89)
T ss_dssp HHHHHHHHHHHHSCT-TCCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCC-cCCCCHHHHHHHHHHHHHhh
Confidence 468888888887543 36789999988887788764
Done!