BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026548
(237 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255585255|ref|XP_002533328.1| protein with unknown function [Ricinus communis]
gi|223526833|gb|EEF29049.1| protein with unknown function [Ricinus communis]
Length = 231
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 190/239 (79%), Positives = 208/239 (87%), Gaps = 10/239 (4%)
Query: 1 MNEEMSGDATDHRHQQQENMIPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKST 60
MN+EM+GD QEN+ +KIDYVFKVVVIGDSAVGK+Q+LSRFTKNEF FDSKST
Sbjct: 1 MNQEMNGD-------DQENL-QEKIDYVFKVVVIGDSAVGKTQLLSRFTKNEFCFDSKST 52
Query: 61 IGVEFQTRTVTINGKIIKAQIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVA 120
IGVEFQTRTVTI GK++KAQIWDTAGQERYRAVTSAYYRGALGA++VYDITKR +FDHVA
Sbjct: 53 IGVEFQTRTVTIKGKVVKAQIWDTAGQERYRAVTSAYYRGALGAMLVYDITKRATFDHVA 112
Query: 121 RWVEELRAHADSSIRIILIGNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDT 180
RWVEELRAHAD+SI I LIGNK+DLVD RAV EDAVEFAEDQGLFFSE SAL+GDNVD
Sbjct: 113 RWVEELRAHADNSIVITLIGNKADLVDQRAVPTEDAVEFAEDQGLFFSETSALSGDNVDR 172
Query: 181 AFFRLLQEIYGAVSKKELECGNGKVDGPP--MLAGSKIDVISGADLEISEMKKLSTCSC 237
AFFRLL+EIYG +SKK LECG K +G ML GSKIDVISG+DLEISEMKKLS CSC
Sbjct: 173 AFFRLLEEIYGVISKKSLECGGHKTNGADSVMLRGSKIDVISGSDLEISEMKKLSACSC 231
>gi|296088976|emb|CBI38679.3| unnamed protein product [Vitis vinifera]
Length = 239
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 188/241 (78%), Positives = 211/241 (87%), Gaps = 6/241 (2%)
Query: 1 MNEEMSGDAT--DHRHQQQENMIPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSK 58
M +EM+G + D HQ QEN +KIDYVFKVVVIGDSAVGK+QILSRFTKNEF FDSK
Sbjct: 1 MKDEMNGAGSHGDQSHQNQENG-HEKIDYVFKVVVIGDSAVGKTQILSRFTKNEFCFDSK 59
Query: 59 STIGVEFQTRTVTINGKIIKAQIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDH 118
STIGVEFQTRTVTI K+IKAQIWDTAGQERYRAVTSAYYRGALGA++VYDITKRQ+FDH
Sbjct: 60 STIGVEFQTRTVTIKSKVIKAQIWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQTFDH 119
Query: 119 VARWVEELRAHADSSIRIILIGNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNV 178
VARWVEELRAHAD+SI I+L+GNK+DLVD RAV +EDAVEF+EDQGLFFSE SALNGDNV
Sbjct: 120 VARWVEELRAHADTSIVIMLVGNKADLVDQRAVPSEDAVEFSEDQGLFFSETSALNGDNV 179
Query: 179 DTAFFRLLQEIYGAVSKKELECGNGKVDG--PPMLAGSKIDVISGADLEISEMKKLSTCS 236
+TAFFR+L+EIYG VSKK LEC +GK +G L GSKIDVIS +DLEISE+KKLS C+
Sbjct: 180 ETAFFRVLEEIYGVVSKKALEC-DGKSNGCDASNLKGSKIDVISASDLEISEVKKLSACT 238
Query: 237 C 237
C
Sbjct: 239 C 239
>gi|359489460|ref|XP_002262618.2| PREDICTED: ras-related protein RABA3-like [Vitis vinifera]
Length = 235
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 185/234 (79%), Positives = 206/234 (88%), Gaps = 4/234 (1%)
Query: 6 SGDATDHRHQQQENMIPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEF 65
+G D HQ QEN +KIDYVFKVVVIGDSAVGK+QILSRFTKNEF FDSKSTIGVEF
Sbjct: 4 AGSHGDQSHQNQENG-HEKIDYVFKVVVIGDSAVGKTQILSRFTKNEFCFDSKSTIGVEF 62
Query: 66 QTRTVTINGKIIKAQIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEE 125
QTRTVTI K+IKAQIWDTAGQERYRAVTSAYYRGALGA++VYDITKRQ+FDHVARWVEE
Sbjct: 63 QTRTVTIKSKVIKAQIWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQTFDHVARWVEE 122
Query: 126 LRAHADSSIRIILIGNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRL 185
LRAHAD+SI I+L+GNK+DLVD RAV +EDAVEF+EDQGLFFSE SALNGDNV+TAFFR+
Sbjct: 123 LRAHADTSIVIMLVGNKADLVDQRAVPSEDAVEFSEDQGLFFSETSALNGDNVETAFFRV 182
Query: 186 LQEIYGAVSKKELECGNGKVDG--PPMLAGSKIDVISGADLEISEMKKLSTCSC 237
L+EIYG VSKK LEC +GK +G L GSKIDVIS +DLEISE+KKLS C+C
Sbjct: 183 LEEIYGVVSKKALEC-DGKSNGCDASNLKGSKIDVISASDLEISEVKKLSACTC 235
>gi|358248878|ref|NP_001239700.1| uncharacterized protein LOC100787725 [Glycine max]
gi|255639774|gb|ACU20180.1| unknown [Glycine max]
Length = 236
Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust.
Identities = 183/240 (76%), Positives = 210/240 (87%), Gaps = 7/240 (2%)
Query: 1 MNEEMSGDATDHRHQQQENMIPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKST 60
MN+EM+G ++ + + DKIDYVFKVVVIGDSAVGK+QILSRF KNEF FDSKST
Sbjct: 1 MNQEMNGVEA----ERVKVNVHDKIDYVFKVVVIGDSAVGKTQILSRFAKNEFCFDSKST 56
Query: 61 IGVEFQTRTVTINGKIIKAQIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVA 120
IGVEFQTRTVTINGK+IKAQIWDTAGQERYRAVTSAYYRGALGA++VYDI+KRQSFDHVA
Sbjct: 57 IGVEFQTRTVTINGKVIKAQIWDTAGQERYRAVTSAYYRGALGAMLVYDISKRQSFDHVA 116
Query: 121 RWVEELRAHADSSIRIILIGNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDT 180
RWV+ELRAHADSSI I+LIGNK DLVD R V AEDAVEFAEDQGLFFSE SAL+G+NV++
Sbjct: 117 RWVDELRAHADSSIVIMLIGNKGDLVDQRVVHAEDAVEFAEDQGLFFSETSALSGENVES 176
Query: 181 AFFRLLQEIYGAVSKKELECGNGKVDGPPMLA---GSKIDVISGADLEISEMKKLSTCSC 237
AFF+LL+EI+ +SK+ LECGNGK + LA GSKIDVISGA+LEI++MKKLS+CSC
Sbjct: 177 AFFKLLEEIHRVISKRSLECGNGKANADNNLATLKGSKIDVISGAELEITDMKKLSSCSC 236
>gi|356520251|ref|XP_003528777.1| PREDICTED: ras-related protein RABA3-like [Glycine max]
Length = 245
Score = 366 bits (939), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 182/245 (74%), Positives = 208/245 (84%), Gaps = 8/245 (3%)
Query: 1 MNEEMSGDATDHR----HQQQENMIPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFD 56
MN+EM+G + R H++ + + +KIDYVFKVVVIGDSAVGK+QILSRF KNEF FD
Sbjct: 1 MNQEMNGVEAEKRQENGHEKVDYDVQEKIDYVFKVVVIGDSAVGKTQILSRFAKNEFCFD 60
Query: 57 SKSTIGVEFQTRTVTINGKIIKAQIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSF 116
SKSTIGVEFQTRTVTINGK+IKAQIWDTAGQERYRAVTSAYYRGALGA++VYDITKRQSF
Sbjct: 61 SKSTIGVEFQTRTVTINGKVIKAQIWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQSF 120
Query: 117 DHVARWVEELRAHADSSIRIILIGNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGD 176
DHVARWVEELRAHADSSI I+L+GNK+DLVD R V EDAVEFAEDQGLFFSE SAL+GD
Sbjct: 121 DHVARWVEELRAHADSSIVIMLVGNKADLVDQRMVPTEDAVEFAEDQGLFFSETSALSGD 180
Query: 177 NVDTAFFRLLQEIYGAVSKKELECGNGKVDGP----PMLAGSKIDVISGADLEISEMKKL 232
NV++AF +LL+EI VSKK LECG GK +G L G+K+D+I G +LEISEMKKL
Sbjct: 181 NVESAFLKLLEEINRVVSKKALECGYGKENGDNNVVASLNGTKVDIILGPELEISEMKKL 240
Query: 233 STCSC 237
S+CSC
Sbjct: 241 SSCSC 245
>gi|356573249|ref|XP_003554775.1| PREDICTED: ras-related protein RABA3-like [Glycine max]
Length = 236
Score = 365 bits (936), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 180/240 (75%), Positives = 208/240 (86%), Gaps = 7/240 (2%)
Query: 1 MNEEMSGDATDHRHQQQENMIPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKST 60
MN+EM+G ++ + + DKIDYVFKVVVIGDSAVGK+QILSRF KNEF F+SKST
Sbjct: 1 MNQEMNGVEA----ERVKVNVHDKIDYVFKVVVIGDSAVGKTQILSRFAKNEFCFNSKST 56
Query: 61 IGVEFQTRTVTINGKIIKAQIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVA 120
IGVEFQTR+VTINGK+IKAQIWDTAGQERYRAVTSAYYRGALGA++VYDITKRQSFDHVA
Sbjct: 57 IGVEFQTRSVTINGKVIKAQIWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQSFDHVA 116
Query: 121 RWVEELRAHADSSIRIILIGNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDT 180
RWV+ELRAHADSSI I+LIGNK DLVD R V AEDAVEFAEDQGLFFSE SAL+G+NV++
Sbjct: 117 RWVDELRAHADSSIVIMLIGNKGDLVDQRVVHAEDAVEFAEDQGLFFSETSALSGENVES 176
Query: 181 AFFRLLQEIYGAVSKKELECGNGKVDGP---PMLAGSKIDVISGADLEISEMKKLSTCSC 237
+FF+LL+EI+ +SK+ LEC NGK + L GSKIDVISGA+LEI+EMKKLS+CSC
Sbjct: 177 SFFKLLEEIHRVISKRSLECDNGKANADNNVATLKGSKIDVISGAELEIAEMKKLSSCSC 236
>gi|356559913|ref|XP_003548240.1| PREDICTED: ras-related protein RABA3-like [Glycine max]
Length = 244
Score = 363 bits (933), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 181/244 (74%), Positives = 207/244 (84%), Gaps = 7/244 (2%)
Query: 1 MNEEMSGDATDHR----HQQQENMIPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFD 56
MN EM+G + R H++ + + +KIDYVFKVVVIGDSAVGK+QILSRF KNEF FD
Sbjct: 1 MNPEMNGVEAEKRQENGHEKVDYDVQEKIDYVFKVVVIGDSAVGKTQILSRFAKNEFCFD 60
Query: 57 SKSTIGVEFQTRTVTINGKIIKAQIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSF 116
SKSTIGVEFQTRTVTIN K+IKAQIWDTAGQERYRAVTSAYYRGALGA++VYDITKRQSF
Sbjct: 61 SKSTIGVEFQTRTVTINAKVIKAQIWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQSF 120
Query: 117 DHVARWVEELRAHADSSIRIILIGNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGD 176
DHVARWVEELRAHADSSI I+L+GNK+DLVD R V EDAVEFAEDQGLFFSE SAL+GD
Sbjct: 121 DHVARWVEELRAHADSSIVIMLVGNKADLVDQRMVPTEDAVEFAEDQGLFFSETSALSGD 180
Query: 177 NVDTAFFRLLQEIYGAVSKKELECGNGKVDGPPMLA---GSKIDVISGADLEISEMKKLS 233
NV++AF +LL+EI VSKK LECG GK +G +A G+K+D+I G +LEISEMKKLS
Sbjct: 181 NVESAFLKLLEEINRVVSKKALECGLGKENGDTNVASLKGTKVDIILGPELEISEMKKLS 240
Query: 234 TCSC 237
+CSC
Sbjct: 241 SCSC 244
>gi|255644772|gb|ACU22888.1| unknown [Glycine max]
Length = 236
Score = 362 bits (929), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 179/240 (74%), Positives = 207/240 (86%), Gaps = 7/240 (2%)
Query: 1 MNEEMSGDATDHRHQQQENMIPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKST 60
MN+EM+G ++ + + DKIDYVFKVVVIGDSAVGK+QILSRF KNEF F+SKST
Sbjct: 1 MNQEMNGVEA----ERVKVNVHDKIDYVFKVVVIGDSAVGKTQILSRFAKNEFCFNSKST 56
Query: 61 IGVEFQTRTVTINGKIIKAQIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVA 120
IGVEFQTR+VTINGK+IKAQIWDTAGQERYRAVTSAYYRGALGA++VYDITKRQSFDHVA
Sbjct: 57 IGVEFQTRSVTINGKVIKAQIWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQSFDHVA 116
Query: 121 RWVEELRAHADSSIRIILIGNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDT 180
RWV+ELRAHADSSI I+LIGNK DLVD R V AEDAVEFAEDQGLFFSE SAL+G+NV++
Sbjct: 117 RWVDELRAHADSSIVIMLIGNKGDLVDQRVVHAEDAVEFAEDQGLFFSETSALSGENVES 176
Query: 181 AFFRLLQEIYGAVSKKELECGNGKVDGP---PMLAGSKIDVISGADLEISEMKKLSTCSC 237
+FF+LL+EI+ +SK+ LEC NGK + L GSKIDVISGA+LEI+EMKK S+CSC
Sbjct: 177 SFFKLLEEIHRVISKRSLECDNGKANADNNVATLKGSKIDVISGAELEIAEMKKSSSCSC 236
>gi|224127991|ref|XP_002320214.1| predicted protein [Populus trichocarpa]
gi|222860987|gb|EEE98529.1| predicted protein [Populus trichocarpa]
Length = 219
Score = 358 bits (919), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 177/219 (80%), Positives = 192/219 (87%), Gaps = 2/219 (0%)
Query: 21 IPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQ 80
+ +KIDYVFKVVVIGDSAVGK+QILSRFTKNEF FDSKSTIGVEFQTRTV I K+IKAQ
Sbjct: 1 VQEKIDYVFKVVVIGDSAVGKTQILSRFTKNEFCFDSKSTIGVEFQTRTVIIKDKVIKAQ 60
Query: 81 IWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIG 140
IWDTAGQERYRAVTSAYYRGALGA++VYDITKR +FDHVARWVEELRAHAD+SI I+LIG
Sbjct: 61 IWDTAGQERYRAVTSAYYRGALGAMLVYDITKRPTFDHVARWVEELRAHADNSIVIMLIG 120
Query: 141 NKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELEC 200
NK+DLVD+RAV EDAVEFAE+QGLFFSE SAL+GDNVD AFFRLL+EIYG + KK LEC
Sbjct: 121 NKADLVDLRAVPTEDAVEFAEEQGLFFSETSALSGDNVDGAFFRLLEEIYGVICKKSLEC 180
Query: 201 GNGKVDGPP--MLAGSKIDVISGADLEISEMKKLSTCSC 237
GNG L GSKID ISG DLEISEMKKLS CSC
Sbjct: 181 GNGNPHAADAITLRGSKIDGISGTDLEISEMKKLSACSC 219
>gi|1370144|emb|CAA98178.1| RAB11B [Lotus japonicus]
Length = 242
Score = 356 bits (914), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 179/240 (74%), Positives = 206/240 (85%), Gaps = 4/240 (1%)
Query: 1 MNEEMSGDATDHRHQQQENMIPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKST 60
MN+EM+G + H Q++N + DKIDYVFKVVVIGDSAVGK+QILSRF KNEF FDSK+T
Sbjct: 1 MNQEMNGVEAEKLHLQEKN-VHDKIDYVFKVVVIGDSAVGKTQILSRFAKNEFCFDSKAT 59
Query: 61 IGVEFQTRTVTINGKIIKAQIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVA 120
IGVEFQTRTVTIN K+IKAQIWDTAGQERYRAVTSAYYRGALGA++VYDITKRQSFDHVA
Sbjct: 60 IGVEFQTRTVTINAKVIKAQIWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQSFDHVA 119
Query: 121 RWVEELRAHADSSIRIILIGNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDT 180
RWVEELRAHADSSI I+LIGNK DLVD R V +EDAVEFAE+QGLFFSE SAL G+NV++
Sbjct: 120 RWVEELRAHADSSIVIMLIGNKGDLVDQRVVLSEDAVEFAEEQGLFFSETSALTGENVES 179
Query: 181 AFFRLLQEIYG-AVSKKEL-ECGNG-KVDGPPMLAGSKIDVISGADLEISEMKKLSTCSC 237
AF +LLQEI VSK+ L +C +G K +G L GSKIDVISG +LEI+E+KK+ +CSC
Sbjct: 180 AFLKLLQEINTRVVSKRSLSDCNHGKKTNGGNSLKGSKIDVISGPELEITEVKKVPSCSC 239
>gi|224068050|ref|XP_002302656.1| predicted protein [Populus trichocarpa]
gi|222844382|gb|EEE81929.1| predicted protein [Populus trichocarpa]
Length = 230
Score = 354 bits (909), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 177/230 (76%), Positives = 196/230 (85%), Gaps = 6/230 (2%)
Query: 10 TDHRHQQQENMIPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRT 69
+D HQ+ ++IDYVFKVVVIGDSAVGK+QILSRFTK+EF FDSKSTIGVEFQTRT
Sbjct: 5 SDQNHQET----AERIDYVFKVVVIGDSAVGKTQILSRFTKDEFCFDSKSTIGVEFQTRT 60
Query: 70 VTINGKIIKAQIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAH 129
VTI GK+IKAQIWDTAGQERYRAVTSAYYRGALGA+++YDITKR +FDHV RWV+ELRAH
Sbjct: 61 VTIKGKVIKAQIWDTAGQERYRAVTSAYYRGALGAMLLYDITKRPTFDHVVRWVDELRAH 120
Query: 130 ADSSIRIILIGNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEI 189
AD+SI I+LIGNK DLVD+RAV AEDAVEFAEDQGLFFSE SA +GDNVD+AFFRLL+EI
Sbjct: 121 ADNSIVIMLIGNKVDLVDLRAVPAEDAVEFAEDQGLFFSETSAFSGDNVDSAFFRLLEEI 180
Query: 190 YGAVSKKELECGNG--KVDGPPMLAGSKIDVISGADLEISEMKKLSTCSC 237
Y V KK LECGNG V L GSKID ISG DLEISE+KK S CSC
Sbjct: 181 YDTVCKKALECGNGNSNVADAITLKGSKIDGISGTDLEISEVKKSSACSC 230
>gi|388514165|gb|AFK45144.1| unknown [Lotus japonicus]
Length = 242
Score = 352 bits (903), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 178/240 (74%), Positives = 204/240 (85%), Gaps = 4/240 (1%)
Query: 1 MNEEMSGDATDHRHQQQENMIPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKST 60
MN+EM+G + H Q++N + DKIDYVFKVVVIGDSAVGK+QILSRF KNEF FDSK+T
Sbjct: 1 MNQEMNGVEAEKLHLQEKN-VHDKIDYVFKVVVIGDSAVGKTQILSRFAKNEFCFDSKAT 59
Query: 61 IGVEFQTRTVTINGKIIKAQIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVA 120
IGVEFQTRTVTIN K+IKAQIWDTAGQERYRAVTSAYYRGALGA++VYDITKRQSFDHVA
Sbjct: 60 IGVEFQTRTVTINAKVIKAQIWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQSFDHVA 119
Query: 121 RWVEELRAHADSSIRIILIGNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDT 180
RWVEELRAHADSSI I+LIGNK D VD R V +EDAVEFAE+QGLFFSE SAL G NV++
Sbjct: 120 RWVEELRAHADSSIVIMLIGNKGDFVDQRVVLSEDAVEFAEEQGLFFSETSALTGGNVES 179
Query: 181 AFFRLLQEIYG-AVSKKEL-ECGNG-KVDGPPMLAGSKIDVISGADLEISEMKKLSTCSC 237
AF +LLQEI VSK+ L +C +G K +G L GSKIDVISG +LEI+E+KK+ +CSC
Sbjct: 180 AFLKLLQEINTRVVSKRSLSDCNHGKKTNGGNSLKGSKIDVISGPELEITEVKKVPSCSC 239
>gi|5926718|dbj|BAA84640.1| PRA2 [Pisum sativum]
Length = 233
Score = 350 bits (897), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 175/241 (72%), Positives = 200/241 (82%), Gaps = 12/241 (4%)
Query: 1 MNEEMSGDATDHRHQQQENMIPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKST 60
MN+EM+G + + +KIDYVFKVVVIGDSAVGK+QILSRFTKNEF FDSKST
Sbjct: 1 MNQEMNGVEAEK--------LQEKIDYVFKVVVIGDSAVGKTQILSRFTKNEFCFDSKST 52
Query: 61 IGVEFQTRTVTINGKIIKAQIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVA 120
IGVEFQT+TVTINGK+IKAQIWDTAGQERYRAVTSAYYRGALGA++VYDITKRQ+FDHVA
Sbjct: 53 IGVEFQTKTVTINGKLIKAQIWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQTFDHVA 112
Query: 121 RWVEELRAHADSSIRIILIGNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDT 180
RWVEELR+HAD SI I+LIGNK DLVD R V EDAVEFAEDQGLFFSE SA +G+NV++
Sbjct: 113 RWVEELRSHADGSIVIMLIGNKGDLVDQRGVQTEDAVEFAEDQGLFFSETSAFSGENVNS 172
Query: 181 AFFRLLQEIYGAVSKKELECGNG-KVDGP---PMLAGSKIDVISGADLEISEMKKLSTCS 236
AF +LLQEI VSK+ LEC NG K +G L G KID+IS ++LEISE+KKL +CS
Sbjct: 173 AFLKLLQEINKVVSKRSLECNNGIKGNGNHDVAALKGEKIDIISASELEISEIKKLHSCS 232
Query: 237 C 237
C
Sbjct: 233 C 233
>gi|303736|dbj|BAA02109.1| GTP-binding protein [Pisum sativum]
gi|738934|prf||2001457B GTP-binding protein
Length = 222
Score = 348 bits (892), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 171/221 (77%), Positives = 193/221 (87%), Gaps = 4/221 (1%)
Query: 21 IPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQ 80
+ +KIDYVFKVVVIGDSAVGK+QILSRFTKNEF FDSKSTIGVEFQT+TVTINGK+IKAQ
Sbjct: 2 LQEKIDYVFKVVVIGDSAVGKTQILSRFTKNEFCFDSKSTIGVEFQTKTVTINGKLIKAQ 61
Query: 81 IWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIG 140
IWDTAGQERYRAVTSAYYRGALGA++VYDITKRQ+FDHVARWVEELR+HAD SI I+LIG
Sbjct: 62 IWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQTFDHVARWVEELRSHADGSIVIMLIG 121
Query: 141 NKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELEC 200
NK DLVD R V EDAVEFAEDQGLFFSE SA +G+NV++AF +LLQEI VSK+ LEC
Sbjct: 122 NKGDLVDQRGVQTEDAVEFAEDQGLFFSETSAFSGENVNSAFLKLLQEINKVVSKRSLEC 181
Query: 201 GNG-KVDGP---PMLAGSKIDVISGADLEISEMKKLSTCSC 237
NG K +G L G KID+ISG++LEISE+KKL +CSC
Sbjct: 182 NNGIKGNGNHDVAALKGEKIDIISGSELEISEIKKLHSCSC 222
>gi|297842990|ref|XP_002889376.1| hypothetical protein ARALYDRAFT_470156 [Arabidopsis lyrata subsp.
lyrata]
gi|297335218|gb|EFH65635.1| hypothetical protein ARALYDRAFT_470156 [Arabidopsis lyrata subsp.
lyrata]
Length = 237
Score = 345 bits (885), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 172/240 (71%), Positives = 202/240 (84%), Gaps = 6/240 (2%)
Query: 1 MNEEMSGDATDHRHQQQENMIPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKST 60
MNEEMSG++ ++ +E +P+KIDYVFKVVVIGDSAVGK+Q+LSRFT+NEF +DSKST
Sbjct: 1 MNEEMSGESPENNKHVKEPTMPEKIDYVFKVVVIGDSAVGKTQLLSRFTQNEFCYDSKST 60
Query: 61 IGVEFQTRTVTINGKIIKAQIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVA 120
IGVEFQTRTVT+ GK++KAQIWDTAGQERYRAVTSAYYRGALGA+VVYDITKR SFDHVA
Sbjct: 61 IGVEFQTRTVTLQGKLVKAQIWDTAGQERYRAVTSAYYRGALGAMVVYDITKRVSFDHVA 120
Query: 121 RWVEELRAHADSSIRIILIGNKSDL-VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVD 179
RWVEELRAHAD S I+L+GNK+DL VD RAV EDAVEFAE Q LFFSE SAL+G NVD
Sbjct: 121 RWVEELRAHADDSAVIMLVGNKADLAVDKRAVPTEDAVEFAETQRLFFSEVSALSGGNVD 180
Query: 180 TAFFRLLQEIYG--AVSKKELECGNGKVDGPPMLAGSKIDVISGADLEISEMKKLSTCSC 237
AFFRLL+EI+ VS+K +E G P L GS+IDVISG+DLEIS++K+ ++CSC
Sbjct: 181 EAFFRLLEEIFSRVVVSRKAMESDGG---APVKLDGSRIDVISGSDLEISKIKEQASCSC 237
>gi|30677910|ref|NP_171628.2| Rab family protein [Arabidopsis thaliana]
gi|75174997|sp|Q9LNK1.1|RABA3_ARATH RecName: Full=Ras-related protein RABA3; Short=AtRABA3
gi|9665141|gb|AAF97325.1|AC023628_6 Putative GTP-binding protein [Arabidopsis thaliana]
gi|38454140|gb|AAR20764.1| At1g01200 [Arabidopsis thaliana]
gi|38604028|gb|AAR24757.1| At1g01200 [Arabidopsis thaliana]
gi|332189132|gb|AEE27253.1| Rab family protein [Arabidopsis thaliana]
Length = 237
Score = 333 bits (853), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 167/240 (69%), Positives = 197/240 (82%), Gaps = 6/240 (2%)
Query: 1 MNEEMSGDATDHRHQQQENMIPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKST 60
MNEEMSG++ ++ ++ +P+KIDYVFKVVVIGDSAVGK+Q+LSRFT NEF +DSKST
Sbjct: 1 MNEEMSGESPENNKHVKKPTMPEKIDYVFKVVVIGDSAVGKTQLLSRFTHNEFCYDSKST 60
Query: 61 IGVEFQTRTVTINGKIIKAQIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVA 120
IGVEFQTRT+T+ GK++KAQIWDTAGQERYRAVTSAYYRGALGA+VVYDITKR SFDHVA
Sbjct: 61 IGVEFQTRTITLRGKLVKAQIWDTAGQERYRAVTSAYYRGALGAMVVYDITKRLSFDHVA 120
Query: 121 RWVEELRAHADSSIRIILIGNKSDL-VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVD 179
RWVEELRAHAD S I+L+GNK+DL V RAV EDAVEFAE Q LFFSE SAL+G NVD
Sbjct: 121 RWVEELRAHADDSAVIMLVGNKADLSVGKRAVPTEDAVEFAETQRLFFSEVSALSGGNVD 180
Query: 180 TAFFRLLQEIYG--AVSKKELECGNGKVDGPPMLAGSKIDVISGADLEISEMKKLSTCSC 237
AFFRLL+EI+ VS+K +E G L GS+IDVISG+DLE S +K+ ++CSC
Sbjct: 181 EAFFRLLEEIFSRVVVSRKAMESDGG---ATVKLDGSRIDVISGSDLETSNIKEQASCSC 237
>gi|357514495|ref|XP_003627536.1| Ras-related protein Rab-11A [Medicago truncatula]
gi|355521558|gb|AET02012.1| Ras-related protein Rab-11A [Medicago truncatula]
Length = 216
Score = 315 bits (808), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 161/227 (70%), Positives = 184/227 (81%), Gaps = 19/227 (8%)
Query: 11 DHRHQQQENMIPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTV 70
++ H++ + + +KIDYVFKVVVIGDSAVGK+QILSRF+KNE TV
Sbjct: 9 ENGHKKIDYDMEEKIDYVFKVVVIGDSAVGKTQILSRFSKNE----------------TV 52
Query: 71 TINGKIIKAQIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHA 130
TINGK+IKAQIWDTAGQERYRAVTSAYYRGALGA++VYDITKRQSFDHVA+WVEELRAHA
Sbjct: 53 TINGKVIKAQIWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQSFDHVAKWVEELRAHA 112
Query: 131 DSSIRIILIGNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIY 190
D+SI I+L+GNK DLVD+R V EDAVEFAEDQGLFFSE SAL G NV+ AF +LL+EI
Sbjct: 113 DNSIVIMLVGNKGDLVDLRMVPTEDAVEFAEDQGLFFSETSALTGVNVEGAFMKLLEEIN 172
Query: 191 GAVSKKELECGNGKVDGPPMLAGSKIDVISGADLEISEMKKLSTCSC 237
VSKK LECGN K L GSKIDVISGA+LEISE+KKLS+CSC
Sbjct: 173 SVVSKKALECGNVK---GIALKGSKIDVISGAELEISEIKKLSSCSC 216
>gi|110430656|gb|ABG73446.1| Ras-related protein Rab11B [Oryza brachyantha]
Length = 248
Score = 285 bits (730), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 144/224 (64%), Positives = 177/224 (79%), Gaps = 12/224 (5%)
Query: 24 KIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWD 83
+IDYVFKVVV+GDSAVGK+Q+L RFTK+EFF DSKSTIGVEFQTRT+T++ K +KAQIWD
Sbjct: 26 EIDYVFKVVVVGDSAVGKTQLLGRFTKDEFFLDSKSTIGVEFQTRTLTLHRKRVKAQIWD 85
Query: 84 TAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKS 143
TAGQERYRAVTSAYYRGALGA+VVYDIT+R++F++VARWVEELRAHAD S + LIGNK+
Sbjct: 86 TAGQERYRAVTSAYYRGALGAMVVYDITRRRTFENVARWVEELRAHADGSTVVALIGNKA 145
Query: 144 DL-VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELEC-- 200
D+ R V+A++A FAE+QGLFFSEASAL+GDNV+ AF LL+EI+ VS++ LE
Sbjct: 146 DMPASRREVAADEAARFAEEQGLFFSEASALSGDNVERAFLTLLEEIFAVVSRRALELDE 205
Query: 201 ------GNGKVDGPPM-LAGSKIDVISGADLEISEMKKLSTCSC 237
G G + L G+ +DV G+ +E S MKK S CSC
Sbjct: 206 ARRMRNGGAGAGGEVLSLKGTTLDV--GSIMETSAMKKSSQCSC 247
>gi|115480275|ref|NP_001063731.1| Os09g0527600 [Oryza sativa Japonica Group]
gi|52077324|dbj|BAD46365.1| putative GTP-binding protein [Oryza sativa Japonica Group]
gi|113631964|dbj|BAF25645.1| Os09g0527600 [Oryza sativa Japonica Group]
gi|125564446|gb|EAZ09826.1| hypothetical protein OsI_32116 [Oryza sativa Indica Group]
gi|215767070|dbj|BAG99298.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 239
Score = 284 bits (726), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 144/223 (64%), Positives = 179/223 (80%), Gaps = 11/223 (4%)
Query: 24 KIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWD 83
+IDYVFKVVV+GDSAVGK+Q+L RFTK+EFF DSKSTIGVEFQTRT++++ K +KAQIWD
Sbjct: 18 EIDYVFKVVVVGDSAVGKTQLLGRFTKDEFFLDSKSTIGVEFQTRTLSLHRKRVKAQIWD 77
Query: 84 TAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKS 143
TAGQERYRAVTSAYYRGALGA+VVYDIT+R++F++VARWVEELRAHAD S + LIGNK+
Sbjct: 78 TAGQERYRAVTSAYYRGALGAMVVYDITRRRTFENVARWVEELRAHADGSTVVALIGNKA 137
Query: 144 DL-VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECG- 201
D+ R V+A++A FAE+QGLFFSEASAL+GDNVD AF LL+EI+ VS++ LE
Sbjct: 138 DMPAGRREVAADEAARFAEEQGLFFSEASALSGDNVDRAFLTLLEEIFAVVSRRALELDE 197
Query: 202 -----NGKVDGPPMLA--GSKIDVISGADLEISEMKKLSTCSC 237
+G G +L+ G+ +DV G+ +E S MKK S CSC
Sbjct: 198 ARRMRDGGAGGGEVLSLKGTTLDV--GSIMETSAMKKSSQCSC 238
>gi|357512579|ref|XP_003626578.1| Ras-related GTP-binding protein [Medicago truncatula]
gi|355501593|gb|AES82796.1| Ras-related GTP-binding protein [Medicago truncatula]
Length = 232
Score = 282 bits (721), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 147/237 (62%), Positives = 171/237 (72%), Gaps = 25/237 (10%)
Query: 1 MNEEMSGDATDHRHQQQENMIPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKST 60
MN+EM+G + Q KIDYVFKVVVIGDSAVGK+Q+LSRF KNEF FDSKST
Sbjct: 21 MNQEMNGVEAERPLQ--------KIDYVFKVVVIGDSAVGKTQMLSRFAKNEFCFDSKST 72
Query: 61 IGVEFQTRTVTINGKIIKAQIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVA 120
IGVEFQTRTVTINGK+IKAQIWDTAGQERYRAVTSAYYRGALGA++VYDITKRQ+FDHVA
Sbjct: 73 IGVEFQTRTVTINGKLIKAQIWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQTFDHVA 132
Query: 121 RWVEELRAHADSSIRIILIGNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDT 180
RW+EELR+HAD+SI I+LIGNK DLVD R V + G FF +N
Sbjct: 133 RWIEELRSHADNSIVIMLIGNKGDLVDQRVVHTDKCCGVCRGSGPFFLRDFKIN------ 186
Query: 181 AFFRLLQEIYGAVSKKELECGNGKVDGPPMLAGSKIDVISGADLEISEMKKLSTCSC 237
VSK+ LE NGK + L GSKID+ISG +L+I+EMK++ +CSC
Sbjct: 187 ----------KVVSKRSLESNNGK-NNIATLKGSKIDIISGPELDITEMKEVPSCSC 232
>gi|116784406|gb|ABK23331.1| unknown [Picea sitchensis]
Length = 222
Score = 281 bits (718), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 144/213 (67%), Positives = 165/213 (77%), Gaps = 2/213 (0%)
Query: 24 KIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWD 83
+IDY+FKVVVIGDSAVGKSQILSRF KNEF DSKSTIGVEFQTRT+ I+ K IK QIWD
Sbjct: 11 RIDYMFKVVVIGDSAVGKSQILSRFAKNEFSLDSKSTIGVEFQTRTIAIDNKTIKTQIWD 70
Query: 84 TAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKS 143
TAGQERYRAVTSAYYRGALGA++VYDITKRQSFDHVARW+EELR HAD++I I+LIGNK
Sbjct: 71 TAGQERYRAVTSAYYRGALGAMLVYDITKRQSFDHVARWLEELRGHADNNIVIMLIGNKC 130
Query: 144 DLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNG 203
DL DMRAV EDA EFA+ +GLFF E SAL NV+TAF L EIY VS+K L
Sbjct: 131 DLRDMRAVPEEDAKEFAQREGLFFFETSALEAINVETAFITALTEIYRIVSRKALTANEE 190
Query: 204 KVDG-PPMLAGSKIDVISGADLEISEMKKLSTC 235
+ +G L G+KI +S + + +KK S C
Sbjct: 191 ERNGNAAALTGTKI-ALSSPEQPVMTVKKRSCC 222
>gi|72384499|gb|AAZ67615.1| 80A08_30 [Brassica rapa subsp. pekinensis]
Length = 223
Score = 280 bits (715), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 135/199 (67%), Positives = 162/199 (81%), Gaps = 1/199 (0%)
Query: 24 KIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWD 83
KIDYVFK+V+IGDS VGKSQILSR+ +NEF DSK+TIGVEFQTRT+ ++ K +KAQIWD
Sbjct: 12 KIDYVFKLVLIGDSGVGKSQILSRYARNEFSLDSKATIGVEFQTRTLVMDHKSVKAQIWD 71
Query: 84 TAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKS 143
TAGQERYRAVTSAYYRGA+GA++VYD+T+RQ+FDH+ RW+EELR HAD +I IIL+GNKS
Sbjct: 72 TAGQERYRAVTSAYYRGAVGAMLVYDVTRRQTFDHIPRWLEELRGHADKNIVIILVGNKS 131
Query: 144 DLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNG 203
DL D RA+S EDA EFAE +GLFF E SALN NV+TAF +L EI+ V+KK L G G
Sbjct: 132 DLEDQRAISTEDAKEFAETEGLFFLETSALNAVNVETAFSTVLTEIFNIVNKKNLVAGEG 191
Query: 204 KVDGPPMLAGSKIDVISGA 222
D P LAG KID++ G
Sbjct: 192 NGD-PGSLAGKKIDIVPGP 209
>gi|15238392|ref|NP_201330.1| RAB GTPase homolog A4A [Arabidopsis thaliana]
gi|75333961|sp|Q9FJN8.1|RAA4A_ARATH RecName: Full=Ras-related protein RABA4a; Short=AtRABA4a
gi|10178189|dbj|BAB11663.1| GTP-binding protein [Arabidopsis thaliana]
gi|15028289|gb|AAK76621.1| putative GTP-binding protein [Arabidopsis thaliana]
gi|19310619|gb|AAL85040.1| putative GTP-binding protein [Arabidopsis thaliana]
gi|21592616|gb|AAM64565.1| GTP-binding protein [Arabidopsis thaliana]
gi|332010648|gb|AED98031.1| RAB GTPase homolog A4A [Arabidopsis thaliana]
Length = 226
Score = 279 bits (713), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 135/200 (67%), Positives = 163/200 (81%), Gaps = 1/200 (0%)
Query: 24 KIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWD 83
KIDYVFKVV+IGDSAVGKSQIL+R+ ++EF DSK+TIGVEFQTRT+ I+ K +KAQIWD
Sbjct: 13 KIDYVFKVVLIGDSAVGKSQILARYARDEFSLDSKATIGVEFQTRTLVIDHKSVKAQIWD 72
Query: 84 TAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKS 143
TAGQERYRAVTSAYYRGA+GA++VYDIT+RQ+FDH+ RW+EELRAHAD +I IILIGNKS
Sbjct: 73 TAGQERYRAVTSAYYRGAVGAMLVYDITRRQTFDHIPRWLEELRAHADKNIVIILIGNKS 132
Query: 144 DLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNG 203
DLVD RA+ EDA EFAE +GLFF E SA N NV++AF +L EI+ V+KK L
Sbjct: 133 DLVDQRAIPTEDAKEFAEKEGLFFLETSAFNATNVESAFSTVLTEIFNIVNKKSLAASED 192
Query: 204 KVDGPP-MLAGSKIDVISGA 222
+ +G P LAG KID++ G
Sbjct: 193 QENGNPGSLAGKKIDIVPGP 212
>gi|297794129|ref|XP_002864949.1| hypothetical protein ARALYDRAFT_919858 [Arabidopsis lyrata subsp.
lyrata]
gi|297310784|gb|EFH41208.1| hypothetical protein ARALYDRAFT_919858 [Arabidopsis lyrata subsp.
lyrata]
Length = 226
Score = 279 bits (713), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 135/200 (67%), Positives = 163/200 (81%), Gaps = 1/200 (0%)
Query: 24 KIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWD 83
KIDYVFKVV+IGDSAVGKSQIL+R+ ++EF DSK+TIGVEFQTRT+ I+ K +KAQIWD
Sbjct: 13 KIDYVFKVVLIGDSAVGKSQILARYARDEFSLDSKATIGVEFQTRTLVIDHKSVKAQIWD 72
Query: 84 TAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKS 143
TAGQERYRAVTSAYYRGA+GA++VYDIT+RQ+FDH+ RW+EELRAHAD +I IILIGNKS
Sbjct: 73 TAGQERYRAVTSAYYRGAVGAMLVYDITRRQTFDHIPRWLEELRAHADKNIVIILIGNKS 132
Query: 144 DLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNG 203
DLVD RA+ EDA EFAE +GLFF E SA N NV++AF +L EI+ V+KK L
Sbjct: 133 DLVDQRAIPTEDAREFAEKEGLFFLETSAFNATNVESAFSTVLSEIFNIVNKKSLAASED 192
Query: 204 KVDGPP-MLAGSKIDVISGA 222
+ +G P LAG KID++ G
Sbjct: 193 QENGNPGSLAGKKIDIVPGP 212
>gi|224096151|ref|XP_002310552.1| predicted protein [Populus trichocarpa]
gi|222853455|gb|EEE91002.1| predicted protein [Populus trichocarpa]
Length = 223
Score = 278 bits (710), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 141/214 (65%), Positives = 166/214 (77%), Gaps = 4/214 (1%)
Query: 24 KIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWD 83
KIDYVFKVV+IGDSAVGKSQIL+RF +NEF DSK+TIGVEFQTRT+ I+ K +KAQIWD
Sbjct: 13 KIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIDHKSVKAQIWD 72
Query: 84 TAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKS 143
TAGQERYRAVTSAYYRGA+GA++VYDITKRQ+FDH+ RW+EELR HAD +I IILIGNKS
Sbjct: 73 TAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHADKNIVIILIGNKS 132
Query: 144 DLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNG 203
DL D RAV EDA EFA+ +GLFF E SAL NV+ AF +L EI+ V+KK L G
Sbjct: 133 DLEDQRAVPTEDAKEFAQKEGLFFLETSALQATNVENAFMTVLTEIFNIVNKKNLVAGED 192
Query: 204 KVDG-PPMLAGSKIDVISGADLEISEMKKLSTCS 236
+++G P L+G KI +I G EI K CS
Sbjct: 193 QINGNPASLSGKKI-IIPGPAQEIPAKSK--CCS 223
>gi|224083598|ref|XP_002307071.1| predicted protein [Populus trichocarpa]
gi|118482292|gb|ABK93073.1| unknown [Populus trichocarpa]
gi|222856520|gb|EEE94067.1| predicted protein [Populus trichocarpa]
Length = 223
Score = 277 bits (709), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 139/209 (66%), Positives = 164/209 (78%), Gaps = 2/209 (0%)
Query: 24 KIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWD 83
KIDYVFKVV+IGDSAVGKSQIL+RF +NEF DSK+TIGVEFQTRT+ I+ K +KAQIWD
Sbjct: 13 KIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIDHKSVKAQIWD 72
Query: 84 TAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKS 143
TAGQERYRAVTSAYYRGA+GA++VYDITKRQ+FDH+ RW+EELR+HAD +I IILIGNKS
Sbjct: 73 TAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRSHADKNIVIILIGNKS 132
Query: 144 DLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNG 203
DL D RAV ED EFA+ +GLFF E SAL NV++AF LL EI+ V+KK L G
Sbjct: 133 DLEDQRAVPTEDVNEFAQKEGLFFLETSALQATNVESAFMTLLTEIFNIVNKKNLIAGEN 192
Query: 204 KVDG-PPMLAGSKIDVISGADLEISEMKK 231
+ +G P L+G KI +I G EI K
Sbjct: 193 QSNGNPASLSGKKI-IIPGPAQEIPSKSK 220
>gi|15236099|ref|NP_195709.1| RAB GTPase homolog A4B [Arabidopsis thaliana]
gi|75337421|sp|Q9SMQ6.1|RAA4B_ARATH RecName: Full=Ras-related protein RABA4b; Short=AtRABA4b; AltName:
Full=Ras-related protein GB3; Short=AtGB3; AltName:
Full=Ras-related protein Rab11G; Short=AtRab11G
gi|4490750|emb|CAB38912.1| GTP-binding protein GB3 [Arabidopsis thaliana]
gi|7271054|emb|CAB80662.1| GTP-binding protein GB3 [Arabidopsis thaliana]
gi|18253027|gb|AAL62440.1| GTP-binding protein GB3 [Arabidopsis thaliana]
gi|22136472|gb|AAM91314.1| GTP-binding protein GB3 [Arabidopsis thaliana]
gi|332661750|gb|AEE87150.1| RAB GTPase homolog A4B [Arabidopsis thaliana]
Length = 224
Score = 277 bits (708), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 139/212 (65%), Positives = 167/212 (78%), Gaps = 4/212 (1%)
Query: 24 KIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWD 83
K+DYVFKVV+IGDSAVGKSQ+L+RF ++EF DSK+TIGVEFQTRT++I K IKAQIWD
Sbjct: 13 KVDYVFKVVLIGDSAVGKSQLLARFARDEFSMDSKATIGVEFQTRTLSIEQKSIKAQIWD 72
Query: 84 TAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKS 143
TAGQERYRAVTSAYYRGA+GA++VYD+TKR++F+H+ RW+EELRAHAD +I IILIGNKS
Sbjct: 73 TAGQERYRAVTSAYYRGAVGAMLVYDMTKRETFEHIPRWLEELRAHADKNIVIILIGNKS 132
Query: 144 DLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNG 203
DL D RAV EDA EFAE +GLFF E SALN NV+ +F L+ +IY V+KK L G
Sbjct: 133 DLEDQRAVPTEDAKEFAEKEGLFFLETSALNATNVENSFNTLMTQIYNTVNKKNL-ASEG 191
Query: 204 KVDGPPMLAGSKIDVISGADLEISEMKKLSTC 235
+ P LAG KI +I G+ EI K STC
Sbjct: 192 DSNNPGSLAGKKI-LIPGSGQEIP--AKTSTC 220
>gi|449451415|ref|XP_004143457.1| PREDICTED: ras-related protein Rab11A-like [Cucumis sativus]
gi|449496418|ref|XP_004160129.1| PREDICTED: ras-related protein Rab11A-like [Cucumis sativus]
Length = 226
Score = 276 bits (707), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 140/214 (65%), Positives = 164/214 (76%), Gaps = 2/214 (0%)
Query: 24 KIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWD 83
KIDYVFKVV+IGDSAVGKSQIL+RF +NEF DSK+TIGVEFQTRT+ I K +KAQIWD
Sbjct: 13 KIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWD 72
Query: 84 TAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKS 143
TAGQERYRAVTSAYYRGALGA++VYDITKRQ+FDH+ RW+EELR+HAD +I IILIGNKS
Sbjct: 73 TAGQERYRAVTSAYYRGALGAMLVYDITKRQTFDHIPRWLEELRSHADKNIVIILIGNKS 132
Query: 144 DLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNG 203
DL D RAV EDA EFAE +GLFF E SAL NV+ AF +L EI+ +++K L G
Sbjct: 133 DLEDQRAVPTEDAKEFAEKEGLFFLETSALESTNVENAFMTVLTEIFSIMNRKNLAAGEN 192
Query: 204 KVDG-PPMLAGSKIDVISGADLEISEMKKLSTCS 236
+ +G LAG K +I G EI K+ CS
Sbjct: 193 QGNGNSASLAGGKKIIIPGPAQEIPAKSKM-CCS 225
>gi|297798036|ref|XP_002866902.1| hypothetical protein ARALYDRAFT_490786 [Arabidopsis lyrata subsp.
lyrata]
gi|297312738|gb|EFH43161.1| hypothetical protein ARALYDRAFT_490786 [Arabidopsis lyrata subsp.
lyrata]
Length = 227
Score = 276 bits (707), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 140/214 (65%), Positives = 167/214 (78%), Gaps = 5/214 (2%)
Query: 24 KIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWD 83
K+DYVFKVV+IGDSAVGKSQ+L+RF ++EF DSK+TIGVEFQTRT++I K IKAQIWD
Sbjct: 13 KVDYVFKVVLIGDSAVGKSQLLARFARDEFSMDSKATIGVEFQTRTLSIEQKSIKAQIWD 72
Query: 84 TAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKS 143
TAGQERYRAVTSAYYRGA+GA++VYD+TKR++F+H+ RW+EELRAHAD +I IILIGNKS
Sbjct: 73 TAGQERYRAVTSAYYRGAVGAMLVYDMTKRETFEHIPRWLEELRAHADKNIVIILIGNKS 132
Query: 144 DLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELEC--G 201
DL D RAV EDA EFAE +GLFF E SALN NV+ +F L+ EIY V+KK L
Sbjct: 133 DLEDQRAVPTEDAKEFAEKEGLFFLETSALNATNVENSFNTLMTEIYNTVNKKNLASVEN 192
Query: 202 NGKVDGPPMLAGSKIDVISGADLEISEMKKLSTC 235
G + P LAG KI VI G+ +I K STC
Sbjct: 193 QGDSNNPGSLAGKKI-VIPGSGQDIP--AKTSTC 223
>gi|297807067|ref|XP_002871417.1| hypothetical protein ARALYDRAFT_325580 [Arabidopsis lyrata subsp.
lyrata]
gi|297317254|gb|EFH47676.1| hypothetical protein ARALYDRAFT_325580 [Arabidopsis lyrata subsp.
lyrata]
Length = 226
Score = 276 bits (707), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 136/210 (64%), Positives = 167/210 (79%), Gaps = 1/210 (0%)
Query: 24 KIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWD 83
KIDYVFK+V+IGDS VGKSQILSR+ +NEF DSK+TIGVEFQTRT+ I+ K +KAQIWD
Sbjct: 13 KIDYVFKLVLIGDSGVGKSQILSRYARNEFSLDSKATIGVEFQTRTLVIDHKSVKAQIWD 72
Query: 84 TAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKS 143
TAGQERYRAVTSAYYRGA+GA++VYD+T+RQ+FDH+ RW+EELR +AD +I IIL+GNKS
Sbjct: 73 TAGQERYRAVTSAYYRGAVGAMLVYDVTRRQTFDHIPRWLEELRNNADKNIVIILVGNKS 132
Query: 144 DLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNG 203
DL D RA+S EDA +FAE +GLFF E SALN NV++AF +L EI+ V+KK L G G
Sbjct: 133 DLEDQRAISMEDAKDFAEKEGLFFLETSALNAVNVESAFSTVLTEIFNIVNKKSLVAGEG 192
Query: 204 KVDGPP-MLAGSKIDVISGADLEISEMKKL 232
+ +G P LAG KID++ G I KL
Sbjct: 193 EGNGDPGSLAGKKIDIVPGPGQVIPTKNKL 222
>gi|1184985|gb|AAA87884.1| ATGB3 [Arabidopsis thaliana]
Length = 224
Score = 276 bits (705), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 140/214 (65%), Positives = 169/214 (78%), Gaps = 8/214 (3%)
Query: 24 KIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWD 83
K+DYVFKVV+IGDSAVGKSQ+L+RF ++EF DSK+TIGVEFQTRT++I K IKAQIWD
Sbjct: 13 KVDYVFKVVLIGDSAVGKSQLLARFARDEFSMDSKATIGVEFQTRTLSIEQKSIKAQIWD 72
Query: 84 TAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKS 143
TAGQERYRAVTSAYYRGA+GA++VYD+TKR++F+H+ RW+EELRAHAD +I IILIGNKS
Sbjct: 73 TAGQERYRAVTSAYYRGAVGAMLVYDMTKRETFEHIPRWLEELRAHADKNIVIILIGNKS 132
Query: 144 DLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL--ECG 201
DL D RAV EDA EFAE +GLFF E SALN NV+ +F L+ +IY V+KK L EC
Sbjct: 133 DLEDQRAVPTEDAKEFAEKEGLFFLETSALNATNVENSFNTLMTQIYNTVNKKNLASECD 192
Query: 202 NGKVDGPPMLAGSKIDVISGADLEISEMKKLSTC 235
+ + P LAG KI +I G+ EI K STC
Sbjct: 193 S---NNPGSLAGKKI-LIPGSGQEIP--AKTSTC 220
>gi|168016234|ref|XP_001760654.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162688014|gb|EDQ74393.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 221
Score = 275 bits (702), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 139/218 (63%), Positives = 167/218 (76%), Gaps = 3/218 (1%)
Query: 19 NMIPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIK 78
N +KIDYVFKVV+IGDSAVGKSQ+LSRF++NEF +SK+TIGVEFQTRT+ ++ K IK
Sbjct: 6 NEYDNKIDYVFKVVLIGDSAVGKSQLLSRFSRNEFSLESKATIGVEFQTRTIVVDHKTIK 65
Query: 79 AQIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIIL 138
AQIWDTAGQERYRAVTSAYYRGA+GA+VVYDITK QSFDHV RW+EELRAHAD++I I+L
Sbjct: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMVVYDITKEQSFDHVLRWLEELRAHADANIVIML 125
Query: 139 IGNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL 198
IGNKSDL ++R V + A E+AE QGL F E SA+ NV+TAFF +L EIY VSKK L
Sbjct: 126 IGNKSDLSNLRQVETDTAREYAEKQGLSFLETSAMESTNVETAFFTVLSEIYKTVSKKAL 185
Query: 199 ECGNGKVDGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
+ G P+L G+KI + D + KK CS
Sbjct: 186 -IADENQGGAPLLPGTKITLTDKDD--VIGTKKAGCCS 220
>gi|21617896|gb|AAM66946.1| GTP-binding protein GB3 [Arabidopsis thaliana]
Length = 224
Score = 275 bits (702), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 138/212 (65%), Positives = 166/212 (78%), Gaps = 4/212 (1%)
Query: 24 KIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWD 83
K+DYVFKVV+IGDSAVGKSQ+L+RF ++EF DSK+TIGVEFQTRT++I K IKAQIWD
Sbjct: 13 KVDYVFKVVLIGDSAVGKSQLLARFARDEFSMDSKATIGVEFQTRTLSIEQKSIKAQIWD 72
Query: 84 TAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKS 143
TAGQERYRAVTSAYYRGA+GA++VYD+TKR++F+H+ RW+EELRAHAD +I IILIGNKS
Sbjct: 73 TAGQERYRAVTSAYYRGAVGAMLVYDMTKRETFEHIPRWLEELRAHADKNIVIILIGNKS 132
Query: 144 DLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNG 203
DL D RAV EDA EFAE +GLFF E SALN NV+ +F L+ +IY V+KK L G
Sbjct: 133 DLEDQRAVPTEDAKEFAEKEGLFFLETSALNATNVENSFNTLMTQIYNTVNKKNL-ASEG 191
Query: 204 KVDGPPMLAGSKIDVISGADLEISEMKKLSTC 235
+ P LAG KI +I + EI K STC
Sbjct: 192 DSNNPGSLAGKKI-LIPASGQEIP--AKTSTC 220
>gi|225468180|ref|XP_002273530.1| PREDICTED: ras-related protein Rab11A [Vitis vinifera]
gi|147811153|emb|CAN70163.1| hypothetical protein VITISV_039255 [Vitis vinifera]
Length = 226
Score = 273 bits (699), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 137/204 (67%), Positives = 159/204 (77%), Gaps = 2/204 (0%)
Query: 24 KIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWD 83
KIDYVFKVV+IGDSAVGKSQIL+RF +NEF DSK+TIGVEFQTRT+ I K +KAQIWD
Sbjct: 13 KIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWD 72
Query: 84 TAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKS 143
TAGQERYRAVTSAYYRGA+GA++VYDITKRQSFDH+ RW+EELR HAD +I IILIGNK+
Sbjct: 73 TAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHIPRWLEELRGHADKNIVIILIGNKT 132
Query: 144 DLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNG 203
DL + RAV EDA EFAE +GLFF E SAL NV+ AF +L EI+ V+KK L G
Sbjct: 133 DLEEQRAVPTEDAKEFAEKEGLFFLETSALEATNVENAFLTVLTEIFNIVNKKNLVAGED 192
Query: 204 KVDG-PPMLAGSKIDVISGADLEI 226
+ +G P L G +I I G EI
Sbjct: 193 QANGNPASLTGKRI-TIPGPAQEI 215
>gi|226532614|ref|NP_001149604.1| LOC100283230 [Zea mays]
gi|195628412|gb|ACG36036.1| ras-related protein Rab11D [Zea mays]
gi|224032313|gb|ACN35232.1| unknown [Zea mays]
gi|413934318|gb|AFW68869.1| Ras protein Rab11D [Zea mays]
Length = 217
Score = 273 bits (697), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 137/212 (64%), Positives = 161/212 (75%), Gaps = 1/212 (0%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
DK+DYVFKVV+IGDSAVGKSQIL+RF +NEF DSK+TIGVEFQTRT+ I K +KAQIW
Sbjct: 6 DKVDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIEHKSVKAQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRAVTSAYYRGALGA++VYDITKRQSFDH+ RW+EELR HAD +I I+L+GNK
Sbjct: 66 DTAGQERYRAVTSAYYRGALGALLVYDITKRQSFDHIPRWLEELRGHADKNIVIMLVGNK 125
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
SDL D RAVS EDA EFAE + LFF E SAL NV+ AF +L EI+ SKK +
Sbjct: 126 SDLEDERAVSTEDAKEFAEKENLFFLETSALQATNVENAFQTVLTEIFKIHSKKNMAADP 185
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLST 234
P LAG K+ ++ G EI + K S+
Sbjct: 186 RANGAAPSLAGKKV-IVPGPAQEIPKSKCCSS 216
>gi|255581740|ref|XP_002531672.1| protein with unknown function [Ricinus communis]
gi|223528703|gb|EEF30716.1| protein with unknown function [Ricinus communis]
Length = 225
Score = 272 bits (696), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 135/213 (63%), Positives = 160/213 (75%), Gaps = 2/213 (0%)
Query: 24 KIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWD 83
KIDYVFKVV+IGDSAVGKSQIL+RF +NEF DSK+TIGVEFQTRT+ I K +KAQIWD
Sbjct: 13 KIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWD 72
Query: 84 TAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKS 143
TAGQERYRAVTSAYYRGA+GA++VYDITKRQ+FDH+ RW+EELR+HAD +I IIL+GNK
Sbjct: 73 TAGQERYRAVTSAYYRGAVGAILVYDITKRQTFDHIPRWLEELRSHADKNIVIILVGNKC 132
Query: 144 DLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNG 203
DL R V EDA EFA+ +GLFF E SAL NV+TAF +L EI+ V+KK L +
Sbjct: 133 DLESQRVVPTEDAKEFAQKEGLFFLETSALESTNVETAFLTVLTEIFNIVNKKTLAGADN 192
Query: 204 KVDGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
+ +G P G K V+ G I E K CS
Sbjct: 193 QTNGNPASLGGKKIVVPGPAQVIPEKSK--CCS 223
>gi|222641954|gb|EEE70086.1| hypothetical protein OsJ_30082 [Oryza sativa Japonica Group]
Length = 260
Score = 272 bits (696), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 137/215 (63%), Positives = 171/215 (79%), Gaps = 7/215 (3%)
Query: 24 KIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWD 83
+IDYVFKVVV+GDSAVGK+Q+L RFTK+EFF DSKSTIGVEFQTRT++++ K +KAQIWD
Sbjct: 18 EIDYVFKVVVVGDSAVGKTQLLGRFTKDEFFLDSKSTIGVEFQTRTLSLHRKRVKAQIWD 77
Query: 84 TAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKS 143
TAGQERYRAVTSAYYRGALGA+VVYDIT+R++F++VARWVEELRAHAD S + LIGNK+
Sbjct: 78 TAGQERYRAVTSAYYRGALGAMVVYDITRRRTFENVARWVEELRAHADGSTVVALIGNKA 137
Query: 144 DL-VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECG- 201
D+ R V+A++A FAE+QGLFFSEASAL+GDNVD AF LL+EI+ VS++ LE
Sbjct: 138 DMPAGRREVAADEAARFAEEQGLFFSEASALSGDNVDRAFLTLLEEIFAVVSRRALELDE 197
Query: 202 -----NGKVDGPPMLAGSKIDVISGADLEISEMKK 231
+G G +L+ + G+ +E S MKK
Sbjct: 198 ARRMRDGGAGGVQVLSLKGTTLNFGSIMETSAMKK 232
>gi|253761760|ref|XP_002489255.1| hypothetical protein SORBIDRAFT_0012s021070 [Sorghum bicolor]
gi|241947115|gb|EES20260.1| hypothetical protein SORBIDRAFT_0012s021070 [Sorghum bicolor]
Length = 217
Score = 272 bits (696), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 136/212 (64%), Positives = 163/212 (76%), Gaps = 1/212 (0%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
DK+DYVFKVV+IGDSAVGKSQIL+RF +NEF DSK+TIGVEFQTRT+ I+ K +KAQIW
Sbjct: 6 DKVDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIDHKSVKAQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRAVTSAYYRGALGA++VYDITKRQSFDH+ RW+EELR HAD +I I+L+GNK
Sbjct: 66 DTAGQERYRAVTSAYYRGALGALLVYDITKRQSFDHIPRWLEELRGHADKNIVIMLVGNK 125
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
SDL + RAVS+EDA EFAE + LFF E SAL NV+ AF +L EI+ SKK +
Sbjct: 126 SDLEEERAVSSEDAKEFAEKENLFFLETSALQATNVENAFQTVLTEIFKIHSKKNMAADP 185
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLST 234
P LAG K+ ++ G EI + K S+
Sbjct: 186 KANGAAPSLAGKKV-IVPGPAQEIPKSKCCSS 216
>gi|326491937|dbj|BAJ98193.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326496867|dbj|BAJ98460.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 247
Score = 272 bits (696), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 141/227 (62%), Positives = 170/227 (74%), Gaps = 14/227 (6%)
Query: 24 KIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWD 83
+IDYVFKVVV+GDSAVGK+Q+L RF K+EFF DSKSTIGVEFQTRT+T++ K +KAQIWD
Sbjct: 21 EIDYVFKVVVVGDSAVGKTQLLGRFAKDEFFLDSKSTIGVEFQTRTLTLHRKRVKAQIWD 80
Query: 84 TAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKS 143
TAGQERYRAVTSAYYRGALGA+VVYD+T+R +FDHV RWVEELRAHAD S + L+GNK+
Sbjct: 81 TAGQERYRAVTSAYYRGALGAMVVYDVTRRATFDHVPRWVEELRAHADGSTVVALVGNKA 140
Query: 144 DL-VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECG- 201
D R V A++A FAE+QGLFFSEASAL GDNV+ AF LL+E++ VS++ LE
Sbjct: 141 DAPAHRREVPADEAARFAEEQGLFFSEASALTGDNVERAFLALLEEVFAVVSRRALELDE 200
Query: 202 -----NGKVDG----PPMLAGSKIDVISGADLEISEMKKL--STCSC 237
NG DG L G+ +D + +E S MKK S CSC
Sbjct: 201 ARRTRNGDGDGDRGQALSLRGTTVD-LHDPIMETSAMKKTASSQCSC 246
>gi|115481766|ref|NP_001064476.1| Os10g0377400 [Oryza sativa Japonica Group]
gi|78708412|gb|ABB47387.1| Ras-related protein Rab11D, putative, expressed [Oryza sativa
Japonica Group]
gi|113639085|dbj|BAF26390.1| Os10g0377400 [Oryza sativa Japonica Group]
gi|215767227|dbj|BAG99455.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218184417|gb|EEC66844.1| hypothetical protein OsI_33317 [Oryza sativa Indica Group]
gi|222612729|gb|EEE50861.1| hypothetical protein OsJ_31310 [Oryza sativa Japonica Group]
Length = 216
Score = 272 bits (695), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 137/212 (64%), Positives = 162/212 (76%), Gaps = 1/212 (0%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
+K+DYVFKVV+IGDSAVGKSQIL+RF +NEF DSK+TIGVEFQTRT+ I+ K +KAQIW
Sbjct: 5 EKVDYVFKVVLIGDSAVGKSQILARFARNEFSIDSKATIGVEFQTRTLLIDHKSVKAQIW 64
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRAVTSAYYRGALGA++VYDITKRQSFDH+ RW+EELR HAD +I I+L+GNK
Sbjct: 65 DTAGQERYRAVTSAYYRGALGALLVYDITKRQSFDHIPRWLEELRGHADKNIVIMLVGNK 124
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
SDL D RAVS EDA EFAE + LFF E SAL NV+ AF +L EI+ SKK +
Sbjct: 125 SDLEDERAVSTEDAKEFAEKENLFFLETSALQATNVENAFQTVLSEIFKIHSKKNMAADP 184
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLST 234
P LAG K+ V+ G EI + K S+
Sbjct: 185 KANGAAPSLAGKKV-VVPGPAQEIPKSKCCSS 215
>gi|302784965|ref|XP_002974254.1| rab family GTPase [Selaginella moellendorffii]
gi|300157852|gb|EFJ24476.1| rab family GTPase [Selaginella moellendorffii]
Length = 220
Score = 272 bits (695), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 134/217 (61%), Positives = 175/217 (80%), Gaps = 8/217 (3%)
Query: 24 KIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWD 83
KIDYVFKVV+IGDSAVGKSQ+LSRF ++EF +SKSTIGVEFQTRT++++GK IKAQIWD
Sbjct: 7 KIDYVFKVVLIGDSAVGKSQLLSRFARDEFTLESKSTIGVEFQTRTISVDGKTIKAQIWD 66
Query: 84 TAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKS 143
TAGQERYRAVTSAYYRGA+GA++VYDIT++Q+F+HVARW+EELR HAD+++ I+++GNKS
Sbjct: 67 TAGQERYRAVTSAYYRGAVGAMLVYDITRKQTFEHVARWLEELRNHADNNVVIMMVGNKS 126
Query: 144 DLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELEC--G 201
DL + RA+S E+ EF+E +GL+F E SAL+ NV+TAF +L EIY VSKK L
Sbjct: 127 DLSNSRAMSVEEGREFSEKEGLYFMETSALDSTNVETAFTTVLTEIYKIVSKKSLAADDP 186
Query: 202 NGKVDG--PPMLAGSKIDVISGADLEISEMKKLSTCS 236
NG + PP+ +G+KI + D E++ +KK + CS
Sbjct: 187 NGGLANVMPPVPSGNKILL----DDELTAVKKRACCS 219
>gi|351726222|ref|NP_001237375.1| uncharacterized protein LOC100527786 [Glycine max]
gi|255633206|gb|ACU16959.1| unknown [Glycine max]
Length = 223
Score = 271 bits (694), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 138/213 (64%), Positives = 163/213 (76%), Gaps = 5/213 (2%)
Query: 24 KIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWD 83
K+DYVFKVV+IGDSAVGKSQIL+RF +NEF DSK+TIGVEFQTRT+ I K +KAQIWD
Sbjct: 13 KVDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWD 72
Query: 84 TAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKS 143
TAGQERYRAVTSAYYRGA+GA++VYDITKRQSFDH+ RW+EELR HAD +I IILIGNKS
Sbjct: 73 TAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHIPRWLEELRNHADKNIVIILIGNKS 132
Query: 144 DLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNG 203
DL + R V EDA EFAE +GLFF E SAL NV+TAF +L EI+ V+KK L G+
Sbjct: 133 DLENQRQVPTEDAKEFAEKEGLFFLETSALEATNVETAFMTVLTEIFNIVNKKNLAAGDN 192
Query: 204 KVDG-PPMLAGSKIDVISGADLEISEMKKLSTC 235
+ +G L+G +I V A E+ K S C
Sbjct: 193 QGNGNAASLSGKQIIVPGTAQ----EIPKRSMC 221
>gi|242045362|ref|XP_002460552.1| hypothetical protein SORBIDRAFT_02g030540 [Sorghum bicolor]
gi|241923929|gb|EER97073.1| hypothetical protein SORBIDRAFT_02g030540 [Sorghum bicolor]
Length = 256
Score = 271 bits (693), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 137/229 (59%), Positives = 173/229 (75%), Gaps = 17/229 (7%)
Query: 24 KIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWD 83
+IDYVFKVVV+GDSAVGK+Q+L+RFT++EF DSKSTIGVEFQTRT+T++ K +KAQIWD
Sbjct: 29 EIDYVFKVVVVGDSAVGKTQLLARFTRDEFALDSKSTIGVEFQTRTLTLHRKRVKAQIWD 88
Query: 84 TAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHAD-SSIRIILIGNK 142
TAGQERYRAVTSAYYRGALGA+VVYD+T+R +F+HVARWVEELRAHAD SS + LIGNK
Sbjct: 89 TAGQERYRAVTSAYYRGALGAMVVYDVTRRATFEHVARWVEELRAHADGSSTVVALIGNK 148
Query: 143 SDL-VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECG 201
+D+ R V+A++A AE+QGLFFSEASAL GDNV+ AF LL+E++ VS++ LE
Sbjct: 149 ADMPAGRREVAADEAARLAEEQGLFFSEASALTGDNVERAFLTLLEEVFAVVSRRALELD 208
Query: 202 NGKVDGPPM-------------LAGSKIDVISGADLEISEMKKLSTCSC 237
+ L G+ +DV G+ +E S MK+ S C+C
Sbjct: 209 EARRMRGDQGQGDGGRGGEVLSLKGTAVDV--GSIMETSAMKRSSQCAC 255
>gi|3024505|sp|Q40522.1|RB11D_TOBAC RecName: Full=Ras-related protein Rab11D
gi|623580|gb|AAA74114.1| putative [Nicotiana tabacum]
Length = 222
Score = 271 bits (693), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 136/214 (63%), Positives = 165/214 (77%), Gaps = 4/214 (1%)
Query: 24 KIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWD 83
KIDYVFKVV+IGDSAVGKSQIL+RF +NEF DSK+TIGVEFQTRT+ I K +KAQIWD
Sbjct: 11 KIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLAIQHKSVKAQIWD 70
Query: 84 TAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKS 143
TAGQERYRAVTSAYYRGA+GA++VYDITKRQ+FDH+ RW+EELRAHAD +I I+LIGNK+
Sbjct: 71 TAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRAHADRNIVIMLIGNKT 130
Query: 144 DLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNG 203
DL D RAV EDA EFA+ +GLFF E SA+ N++ AF +L EI+ V+KK L +
Sbjct: 131 DLEDQRAVPTEDAKEFAQKEGLFFLETSAMEATNLEDAFLTVLTEIFNIVNKKNLAADDN 190
Query: 204 KVDG-PPMLAGSKIDVISGADLEISEMKKLSTCS 236
+ +G P L G KI ++ G I E K + CS
Sbjct: 191 QSNGNPASLTGKKI-LVPGPGQVIPEKK--ACCS 221
>gi|326528455|dbj|BAJ93377.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 216
Score = 271 bits (692), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 135/208 (64%), Positives = 161/208 (77%), Gaps = 1/208 (0%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
+K+DYVFKVV+IGDSAVGKSQIL+RF +NEF DSK+TIGVEFQTRT+ I+ K +KAQIW
Sbjct: 5 EKVDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIDHKSVKAQIW 64
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRAVTSAYYRGALGA++VYDITKRQSFDH+ RW+EELR HAD +I I+L+GNK
Sbjct: 65 DTAGQERYRAVTSAYYRGALGALLVYDITKRQSFDHIPRWLEELRGHADKNIIIMLVGNK 124
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
SDL D RAVS EDA EFAE + LFF E SAL NV++AF +L EI+ SKK +
Sbjct: 125 SDLEDERAVSTEDAKEFAEKENLFFLETSALQATNVESAFQTVLSEIFKIHSKKNIVTDP 184
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMK 230
P LAG K+ ++ G EI + K
Sbjct: 185 KANGAAPPLAGKKV-LVPGPAQEIPKSK 211
>gi|357146059|ref|XP_003573862.1| PREDICTED: ras-related protein Rab11D-like [Brachypodium
distachyon]
Length = 216
Score = 271 bits (692), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 136/212 (64%), Positives = 162/212 (76%), Gaps = 1/212 (0%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
DK+DYVFKVV+IGDSAVGKSQIL+RF +NEF DSK+TIGVEFQTRT+ I+ K +KAQIW
Sbjct: 5 DKVDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLLIDHKSVKAQIW 64
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRAVTSAYYRGALGA++VYDITKRQSFDH+ RW+EELR HAD +I I+L+GNK
Sbjct: 65 DTAGQERYRAVTSAYYRGALGALLVYDITKRQSFDHIPRWLEELRGHADKNIVIMLVGNK 124
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
SDL D RAVS EDA EFAE + +FF E SAL NV+ AF +L EI+ SKK +
Sbjct: 125 SDLEDERAVSTEDAKEFAEKENVFFLETSALQATNVENAFQTVLSEIFKIHSKKNIAAEP 184
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLST 234
P LAG K+ ++ G EI + K S+
Sbjct: 185 KANGSAPSLAGKKV-LVPGPAQEIPKSKCCSS 215
>gi|356567670|ref|XP_003552040.1| PREDICTED: ras-related protein Rab11A-like [Glycine max]
Length = 223
Score = 271 bits (692), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 139/213 (65%), Positives = 160/213 (75%), Gaps = 5/213 (2%)
Query: 24 KIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWD 83
K+DYVFKVV+IGDSAVGKSQIL+RF +NEF DSK+TIGVEFQTRT+ I K IKAQIWD
Sbjct: 13 KVDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSIKAQIWD 72
Query: 84 TAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKS 143
TAGQERYRAVTSAYYRGA+GA++VYDITKRQSFDH+ RW+EELR HAD +I IILIGNKS
Sbjct: 73 TAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHIPRWLEELRNHADKNIVIILIGNKS 132
Query: 144 DLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECG-N 202
DL + R V EDA EFAE +GLFF E SAL NV+TAF +L EI+ ++KK L N
Sbjct: 133 DLENQRQVPTEDAKEFAEKEGLFFLETSALEATNVETAFMTVLTEIFNIINKKNLAASDN 192
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLSTC 235
D L+G KI V A E+ K S C
Sbjct: 193 QGNDNSASLSGKKIIVPGPA----QEIPKRSMC 221
>gi|302807861|ref|XP_002985624.1| rab family GTPase [Selaginella moellendorffii]
gi|300146533|gb|EFJ13202.1| rab family GTPase [Selaginella moellendorffii]
Length = 220
Score = 270 bits (691), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 133/217 (61%), Positives = 174/217 (80%), Gaps = 8/217 (3%)
Query: 24 KIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWD 83
KIDYVFKVV+IGDSAVGKSQ+LSRF ++EF +SKSTIGVEFQTRT++++GK IKAQIWD
Sbjct: 7 KIDYVFKVVLIGDSAVGKSQLLSRFARDEFTLESKSTIGVEFQTRTISVDGKTIKAQIWD 66
Query: 84 TAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKS 143
TAGQERYRAVTSAYYRGA+GA++VYDIT++Q+F+HVARW+EELR HAD+++ I+++GNKS
Sbjct: 67 TAGQERYRAVTSAYYRGAVGAMLVYDITRKQTFEHVARWLEELRNHADNNVVIMMVGNKS 126
Query: 144 DLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELEC--G 201
DL + R +S E+ EF+E +GL+F E SAL+ NV+TAF +L EIY VSKK L
Sbjct: 127 DLSNSRTMSVEEGREFSEKEGLYFMETSALDSTNVETAFTTVLTEIYKIVSKKSLAADDP 186
Query: 202 NGKVDG--PPMLAGSKIDVISGADLEISEMKKLSTCS 236
NG + PP+ +G+KI + D E++ +KK + CS
Sbjct: 187 NGGLANVMPPVPSGNKILL----DDELTAVKKRACCS 219
>gi|3024500|sp|Q40191.1|RB11A_LOTJA RecName: Full=Ras-related protein Rab11A; Flags: Precursor
gi|1370142|emb|CAA98177.1| RAB11A [Lotus japonicus]
Length = 226
Score = 270 bits (691), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 137/210 (65%), Positives = 162/210 (77%), Gaps = 2/210 (0%)
Query: 24 KIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWD 83
KIDYVFKVV+IGDSAVGKSQIL+RF +NEF DSKSTIGVEFQTRT+ I+ K +KAQIWD
Sbjct: 13 KIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKSTIGVEFQTRTLVIDHKTVKAQIWD 72
Query: 84 TAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKS 143
TAGQERYRAVTSAYYRGA+GA++VYDITKRQ+FDH+ RW+EELR HAD +I IILIGNK
Sbjct: 73 TAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHADKNIVIILIGNKC 132
Query: 144 DLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNG 203
DLV+ R V EDA EFAE +GLFF E SAL NV++AF +L EIY V+KK L
Sbjct: 133 DLVNQRDVPTEDAKEFAEKEGLFFLETSALEATNVESAFTTVLTEIYNIVNKKSLAADES 192
Query: 204 KVDG-PPMLAGSKIDVISGADLEISEMKKL 232
+ +G L+G KI +I G EI + +
Sbjct: 193 QGNGNSASLSGQKI-IIPGPAQEIPAKRNM 221
>gi|255544246|ref|XP_002513185.1| protein with unknown function [Ricinus communis]
gi|223547683|gb|EEF49176.1| protein with unknown function [Ricinus communis]
Length = 223
Score = 270 bits (690), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 133/214 (62%), Positives = 166/214 (77%), Gaps = 4/214 (1%)
Query: 24 KIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWD 83
KIDYVFK+V+IGDSAVGKSQ+L+RF +NEF DSK+TIGVEFQT+T+ ++ K +KAQIWD
Sbjct: 11 KIDYVFKIVLIGDSAVGKSQLLARFARNEFNLDSKATIGVEFQTKTIVVDHKTVKAQIWD 70
Query: 84 TAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKS 143
TAGQERYRAVTSAYYRGA+GA++VYDITKRQSFDHVA+W+EELR HAD++I I+L+GNKS
Sbjct: 71 TAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVAKWLEELREHADNNIVIMLVGNKS 130
Query: 144 DLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNG 203
DL +RAV EDA EFA+ + LFF E SAL NV++AF +L EIY VSKK L +
Sbjct: 131 DLESLRAVPIEDAKEFAQKENLFFMETSALEATNVESAFISVLTEIYRVVSKKSLVANDE 190
Query: 204 KVDGPPMLAGSKIDVISGADLEISEMKKLSTCSC 237
+L G+KI VI G + EM+ ++ C
Sbjct: 191 YGGNNSLLKGNKI-VIPGQE---PEMQATNSSCC 220
>gi|357117593|ref|XP_003560549.1| PREDICTED: ras-related protein RABA3-like [Brachypodium distachyon]
Length = 233
Score = 270 bits (689), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 139/218 (63%), Positives = 168/218 (77%), Gaps = 7/218 (3%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
DYVFKVVVIGDS VGK+Q+L RFT++EF DSKSTIG+EFQTRTV + GK +KAQIWDTA
Sbjct: 12 DYVFKVVVIGDSGVGKTQLLGRFTRDEFCLDSKSTIGIEFQTRTVLLAGKRVKAQIWDTA 71
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQERYRAVTSAYYRGALGA++VYD+T+R SF+H ARWV ELRAHAD SI ++LIGNK+DL
Sbjct: 72 GQERYRAVTSAYYRGALGAMLVYDVTRRDSFEHAARWVAELRAHADKSIVVVLIGNKADL 131
Query: 146 ----VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECG 201
V RAV E+A FAE+QGLFF EASAL+GDNV+ AF LL+EI+ AVS++ LE
Sbjct: 132 AVAAVGRRAVDVEEATAFAEEQGLFFYEASALSGDNVEAAFLGLLEEIHAAVSRRPLEVD 191
Query: 202 NGKVDGPP--MLAGSKIDVISGAD-LEISEMKKLSTCS 236
+G G ML G+++ + +E S MK S CS
Sbjct: 192 DGGAGGDGELMLKGTRLSLSQELSMMETSAMKTPSRCS 229
>gi|242036665|ref|XP_002465727.1| hypothetical protein SORBIDRAFT_01g044550 [Sorghum bicolor]
gi|241919581|gb|EER92725.1| hypothetical protein SORBIDRAFT_01g044550 [Sorghum bicolor]
Length = 217
Score = 270 bits (689), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 135/213 (63%), Positives = 168/213 (78%), Gaps = 3/213 (1%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
DK+DYVFKVV+IGDSAVGKSQIL+RF +NEF DSK+TIGVEFQTRT+ I+ + +KAQIW
Sbjct: 6 DKVDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIDHRSVKAQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRAVTSAYYRGALGA++VYDIT+RQSFDH+ RW++ELRAHAD +I I+L+GNK
Sbjct: 66 DTAGQERYRAVTSAYYRGALGALLVYDITRRQSFDHIPRWLDELRAHADKNIVIMLVGNK 125
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
SDL + RAVS EDA EFAE + LFF E SAL NV++AF +L EI+ SKK +
Sbjct: 126 SDLEEQRAVSTEDAKEFAEKENLFFLETSALQATNVESAFQTVLTEIFKIHSKKNM-VSE 184
Query: 203 GKVDG-PPMLAGSKIDVISGADLEISEMKKLST 234
K +G P +AG+K+ ++ G EI + K S+
Sbjct: 185 PKSNGVAPAMAGTKV-LVPGPAQEIPKSKCCSS 216
>gi|224120212|ref|XP_002330992.1| predicted protein [Populus trichocarpa]
gi|222872922|gb|EEF10053.1| predicted protein [Populus trichocarpa]
Length = 218
Score = 269 bits (688), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 134/200 (67%), Positives = 161/200 (80%), Gaps = 2/200 (1%)
Query: 24 KIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWD 83
KIDYVFK+V+IGDSAVGKSQ L+RF +NEF DSK+TIGVEFQT+T+ ++ K +KAQIWD
Sbjct: 10 KIDYVFKIVLIGDSAVGKSQFLARFARNEFNADSKATIGVEFQTKTLAMDNKTVKAQIWD 69
Query: 84 TAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKS 143
TAGQERYRAVTSAYYRGA+GA++VYD+TKRQSFDH+ARW+EELR HAD SI I+LIGNK
Sbjct: 70 TAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHLARWLEELRGHADKSIIIMLIGNKC 129
Query: 144 DLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNG 203
DL +RAV EDA EFA+ + LFF E SAL NV+TAF+ +L EIY +SKK L GN
Sbjct: 130 DLGSLRAVPTEDAEEFAQRENLFFMETSALEATNVETAFWTVLTEIYRIISKKTL-AGND 188
Query: 204 KVDGPP-MLAGSKIDVISGA 222
K DG P + G++I V S A
Sbjct: 189 KSDGNPGVFKGTRILVPSQA 208
>gi|226088538|dbj|BAH37015.1| NtRab11D [Nicotiana tabacum]
Length = 222
Score = 269 bits (688), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 132/196 (67%), Positives = 156/196 (79%), Gaps = 1/196 (0%)
Query: 24 KIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWD 83
KIDYVFKVV+IGDSAVGKSQIL+RF +NEF DSK+TIGVEFQTRT+ I K +KAQIWD
Sbjct: 11 KIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWD 70
Query: 84 TAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKS 143
TAGQERYRAVTSAYYRGA+GA++VYDITKRQ+FDH+ RW+EELRAHAD +I I+LIGNK+
Sbjct: 71 TAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRAHADRNIVIMLIGNKT 130
Query: 144 DLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNG 203
DL D RAV EDA EFA+ +GLFF E SA+ NV+ AF +L EI+ V+KK L
Sbjct: 131 DLEDQRAVPTEDAKEFAQKEGLFFLETSAMEATNVEDAFLTVLTEIFNIVNKKNLAADEN 190
Query: 204 KVDG-PPMLAGSKIDV 218
+ +G P L G KI V
Sbjct: 191 QSNGNPASLTGKKILV 206
>gi|168046618|ref|XP_001775770.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672922|gb|EDQ59453.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 221
Score = 269 bits (687), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 136/218 (62%), Positives = 166/218 (76%), Gaps = 3/218 (1%)
Query: 19 NMIPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIK 78
N +KIDYVFKVV+IGDSAVGKSQ+L+RF++NEF +SK+TIGVEFQTRTV ++ K IK
Sbjct: 6 NEYDNKIDYVFKVVLIGDSAVGKSQLLARFSRNEFSLESKATIGVEFQTRTVVVDHKTIK 65
Query: 79 AQIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIIL 138
AQIWDTAGQERYRAVTSAYYRGA+GA++VYDITK+QSFDHV RW+EELRAHAD++I I+L
Sbjct: 66 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKQQSFDHVQRWLEELRAHADANIVIML 125
Query: 139 IGNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL 198
IGNKSDL ++R V + A EFAE + L F E SA+ NV+TAFF +L EIY VSKK L
Sbjct: 126 IGNKSDLSNLRQVETDTAREFAEKESLSFLETSAMESTNVETAFFTVLSEIYKVVSKKAL 185
Query: 199 ECGNGKVDGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
+ P+L G+KI + D + KK CS
Sbjct: 186 LADENQ-GNSPLLPGTKIKLADKDD--VIGAKKAGCCS 220
>gi|226529763|ref|NP_001151068.1| ras-related protein Rab11D [Zea mays]
gi|226958362|ref|NP_001152898.1| uncharacterized protein LOC100272235 [Zea mays]
gi|194696242|gb|ACF82205.1| unknown [Zea mays]
gi|195644068|gb|ACG41502.1| ras-related protein Rab11D [Zea mays]
gi|413956768|gb|AFW89417.1| Ras protein Rab11D [Zea mays]
Length = 217
Score = 269 bits (687), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 132/212 (62%), Positives = 164/212 (77%), Gaps = 1/212 (0%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
DK+DYVFKVV+IGDSAVGKSQIL+RF +NEF DSK+TIGVEFQTRT+ I+ + +KAQIW
Sbjct: 6 DKVDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIDHRSVKAQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRAVTSAYYRGALGA++VYDIT+RQSFDH+ RW++ELRAHAD +I I+L+GNK
Sbjct: 66 DTAGQERYRAVTSAYYRGALGALLVYDITRRQSFDHIPRWLDELRAHADKNIVIMLVGNK 125
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
SDL + RAVS EDA EFAE + LFF E SAL NV++AF +L EI+ SKK +
Sbjct: 126 SDLEEQRAVSTEDAKEFAEKENLFFLETSALQATNVESAFQTVLTEIFKIHSKKNMVSEP 185
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLST 234
P + G+K+ ++ G EI + K S+
Sbjct: 186 KSNGAAPAMPGTKV-LVPGPAQEIPKSKCCSS 216
>gi|109940137|sp|P25766.2|RGP1_ORYSJ RecName: Full=Ras-related protein RGP1; AltName: Full=GTP-binding
regulatory protein RGP1
gi|50251643|dbj|BAD29646.1| putative ras-related GTP-binding protein [Oryza sativa Japonica
Group]
gi|222641214|gb|EEE69346.1| hypothetical protein OsJ_28668 [Oryza sativa Japonica Group]
Length = 226
Score = 268 bits (686), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 140/218 (64%), Positives = 165/218 (75%), Gaps = 7/218 (3%)
Query: 21 IPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQ 80
+ KIDYVFKVV+IGDSAVGKSQ+L+RF +NEF DSK+TIGVEFQTRT+ I+ + +KAQ
Sbjct: 11 VGQKIDYVFKVVLIGDSAVGKSQLLARFARNEFNLDSKATIGVEFQTRTLHIDARTVKAQ 70
Query: 81 IWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIG 140
IWDTAGQERYRAVTSAYYRGA+GA++VYDITKRQSFDHVARW+EELR HAD +I I+LIG
Sbjct: 71 IWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKNIVIMLIG 130
Query: 141 NKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELEC 200
NKSDL +R V EDA EFAE + LFF E SAL NV+ AF +L EIY VSKK L
Sbjct: 131 NKSDLGTLRVVPTEDAKEFAERENLFFMETSALESTNVENAFMTVLTEIYRIVSKKNL-V 189
Query: 201 GNGKVD---GPPMLAGSKIDVISGADLEISEMKKLSTC 235
N +VD +L G+KI V+ G E + K S C
Sbjct: 190 ANEEVDSSGNSSLLKGTKI-VVPGQ--EPAPPTKASCC 224
>gi|449464898|ref|XP_004150166.1| PREDICTED: ras-related protein RABA4d-like [Cucumis sativus]
gi|449476501|ref|XP_004154754.1| PREDICTED: ras-related protein RABA4d-like [Cucumis sativus]
Length = 223
Score = 268 bits (685), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 133/203 (65%), Positives = 162/203 (79%), Gaps = 5/203 (2%)
Query: 24 KIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWD 83
KIDYVFKVV+IGDSAVGK+Q+L+RF++NEF DSK+TIGVEFQT+T+ I+ K +KAQIWD
Sbjct: 11 KIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVIDQKTVKAQIWD 70
Query: 84 TAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKS 143
TAGQERYRAVTSAYYRGA+GA++VYD+TKRQSFDH+ARW+EELR HAD +I I+LIGNK
Sbjct: 71 TAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKNIVIMLIGNKC 130
Query: 144 DLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNG 203
DL +RAV EDA EFAE + LFF E SAL NV+TAFF +L EIY +SKK L G
Sbjct: 131 DLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRIISKKSLAAGE- 189
Query: 204 KVD---GPPMLAGSKIDVISGAD 223
++D P + G+ I V+ G D
Sbjct: 190 EIDIGSNPALFKGTSI-VVPGQD 211
>gi|357463299|ref|XP_003601931.1| GTP-binding protein [Medicago truncatula]
gi|355490979|gb|AES72182.1| GTP-binding protein [Medicago truncatula]
gi|388518511|gb|AFK47317.1| unknown [Medicago truncatula]
Length = 222
Score = 268 bits (685), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 138/213 (64%), Positives = 161/213 (75%), Gaps = 5/213 (2%)
Query: 24 KIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWD 83
KIDYVFKVV+IGDSAVGKSQIL+RF +N+F DSK+TIGVEFQTRT+ I K +KAQIWD
Sbjct: 12 KIDYVFKVVLIGDSAVGKSQILARFARNDFSMDSKATIGVEFQTRTLVIEHKSVKAQIWD 71
Query: 84 TAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKS 143
TAGQERYRAVTSAYYRGA+GA++VYDITKR SFDH+ RW+EELR HAD +I IILIGNKS
Sbjct: 72 TAGQERYRAVTSAYYRGAVGAMLVYDITKRPSFDHIPRWLEELRNHADKNIVIILIGNKS 131
Query: 144 DLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNG 203
DL + RAV EDA EFAE +GLFF E SAL NV+TAF +L EI+ V+KK L
Sbjct: 132 DLEEQRAVPTEDAKEFAEKEGLFFLETSALQATNVETAFMTVLTEIFNIVNKKNLAADEN 191
Query: 204 KVDG-PPMLAGSKIDVISGADLEISEMKKLSTC 235
+ +G L+G KI V A E+ K S C
Sbjct: 192 QGNGNSASLSGKKIIVPGPA----QEIPKKSMC 220
>gi|116781881|gb|ABK22282.1| unknown [Picea sitchensis]
Length = 219
Score = 268 bits (684), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 140/222 (63%), Positives = 171/222 (77%), Gaps = 10/222 (4%)
Query: 19 NMIPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIK 78
+M P KIDYVFKVV+IGDSAVGKSQILSRF ++EF DSK+TIGVEFQTRTV I K +K
Sbjct: 2 DMNP-KIDYVFKVVLIGDSAVGKSQILSRFARDEFSLDSKATIGVEFQTRTVVIEHKSVK 60
Query: 79 AQIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIIL 138
AQIWDTAGQERYRAVTSAYYRGA+GA++VYDITKRQ+FDHV RW+EELR HAD++I I+L
Sbjct: 61 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHVPRWLEELRNHADNNIVIML 120
Query: 139 IGNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL 198
+GNK DL ++RAV EDA EFA+ +GLFF E SA+ NV+TAF +L EI+ VSKK L
Sbjct: 121 VGNKCDLDNLRAVPTEDAKEFAQKEGLFFLETSAMEATNVETAFLTVLTEIFKIVSKKSL 180
Query: 199 ----ECGNGKVDGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
+ GNG L+G+ I V+ G + + + KK S C+
Sbjct: 181 IASQDQGNG---NHASLSGTSI-VVPGQEQDTTTKKK-SCCT 217
>gi|356512683|ref|XP_003525046.1| PREDICTED: ras-related protein Rab11A [Glycine max]
Length = 229
Score = 268 bits (684), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 134/210 (63%), Positives = 160/210 (76%), Gaps = 2/210 (0%)
Query: 24 KIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWD 83
+IDYVFKVV+IGDSAVGKSQIL+RF +NEF DSKSTIGVEFQTRT+ I+ K +KAQIWD
Sbjct: 16 RIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKSTIGVEFQTRTLVIDHKTVKAQIWD 75
Query: 84 TAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKS 143
TAGQERYRAVTSAYYRGA+GA++VYDITKRQ+FDH+ RW+EELR HAD +I IIL GNK
Sbjct: 76 TAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHADKNIVIILTGNKC 135
Query: 144 DLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNG 203
DL + R V EDA EFAE +GLFF E SAL NV+TAF +L EIY V+KK L
Sbjct: 136 DLENQRDVPTEDAKEFAEKEGLFFLETSALEATNVETAFITVLTEIYNIVNKKNLTADEN 195
Query: 204 KVDG-PPMLAGSKIDVISGADLEISEMKKL 232
+ +G L+G KI ++ G EI + +
Sbjct: 196 QGNGNSASLSGQKI-IVPGPAQEIPAKRNM 224
>gi|226503741|ref|NP_001151560.1| ras-related protein Rab11D [Zea mays]
gi|194708702|gb|ACF88435.1| unknown [Zea mays]
gi|195647718|gb|ACG43327.1| ras-related protein Rab11D [Zea mays]
gi|414865255|tpg|DAA43812.1| TPA: Ras protein Rab11D [Zea mays]
Length = 217
Score = 268 bits (684), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 131/212 (61%), Positives = 164/212 (77%), Gaps = 1/212 (0%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
DK+DYVFKVV+IGDSAVGKSQIL+RF +NEF DSK+TIGVEFQTRT+ I+ + +KAQIW
Sbjct: 6 DKVDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIDHRSVKAQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRAVTSAYYRGALGA++VYDIT+RQSFDH+ RW++ELRAHAD +I I+L+GNK
Sbjct: 66 DTAGQERYRAVTSAYYRGALGALLVYDITRRQSFDHIPRWLDELRAHADKNIVIMLVGNK 125
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
SDL + RAVS EDA EFAE + LFF E SAL NV+++F +L EI+ SKK +
Sbjct: 126 SDLEEQRAVSTEDAKEFAEKENLFFLETSALQATNVESSFQTVLTEIFKIHSKKNMVSEP 185
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLST 234
P + G+K+ ++ G EI + K S+
Sbjct: 186 KSNGAAPAMPGTKV-LVPGPAQEIPKSKCCSS 216
>gi|388522627|gb|AFK49375.1| unknown [Medicago truncatula]
Length = 225
Score = 267 bits (683), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 134/204 (65%), Positives = 159/204 (77%), Gaps = 2/204 (0%)
Query: 24 KIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWD 83
+IDYVFKVV+IGDSAVGKSQIL+RF++NEF DSKSTIGVEFQTRT+ I+ K +KAQIWD
Sbjct: 13 RIDYVFKVVLIGDSAVGKSQILARFSRNEFSLDSKSTIGVEFQTRTLVIDHKTVKAQIWD 72
Query: 84 TAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKS 143
TAGQERYRAVTSAYYRGA+GA++VYDITKRQ+FDH+ RW+EELR HAD +I IIL+GNKS
Sbjct: 73 TAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHADKNIVIILVGNKS 132
Query: 144 DLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNG 203
DL + R V EDA EFAE +GLFF E SAL NV+ +F +L EIY V+KK L
Sbjct: 133 DLENQRDVPTEDAKEFAEKEGLFFLETSALQATNVEASFMTVLTEIYNTVNKKNLAADES 192
Query: 204 KVDG-PPMLAGSKIDVISGADLEI 226
+ +G L G KI +I G EI
Sbjct: 193 QGNGNSASLLGQKI-IIPGPAQEI 215
>gi|302805127|ref|XP_002984315.1| rab family GTPase [Selaginella moellendorffii]
gi|300148164|gb|EFJ14825.1| rab family GTPase [Selaginella moellendorffii]
Length = 214
Score = 267 bits (682), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 133/214 (62%), Positives = 165/214 (77%), Gaps = 9/214 (4%)
Query: 24 KIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWD 83
KIDYVFKVV+IGDSAVGKSQ+L+RF++NEF +SK+TIGVEFQTRT+ ++ K IKAQIWD
Sbjct: 10 KIDYVFKVVLIGDSAVGKSQLLARFSRNEFTLESKATIGVEFQTRTMVVDHKTIKAQIWD 69
Query: 84 TAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKS 143
TAGQERYRA+TSAYYRGA+GA+VVYDITKR +F+HV RW+EEL+ HAD++I ++L+GNKS
Sbjct: 70 TAGQERYRAITSAYYRGAVGALVVYDITKRPTFEHVTRWLEELKVHADNNIVVMLVGNKS 129
Query: 144 DLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNG 203
DL ++RAVS E+A + AE + LFF E SAL NVD+AFF +L EIY VSKK L G G
Sbjct: 130 DLGNLRAVSVEEAKDLAEREELFFMETSALEATNVDSAFFSVLTEIYRIVSKKSLSEGAG 189
Query: 204 KVDGPPMLAGSKIDVISGADLEISEMKKLSTCSC 237
GS+ I G L +SE K+ T C
Sbjct: 190 ---------GSQQIPIPGTTLLLSEKKESKTGCC 214
>gi|302781422|ref|XP_002972485.1| rab family GTPase [Selaginella moellendorffii]
gi|300159952|gb|EFJ26571.1| rab family GTPase [Selaginella moellendorffii]
Length = 214
Score = 267 bits (682), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 133/214 (62%), Positives = 165/214 (77%), Gaps = 9/214 (4%)
Query: 24 KIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWD 83
KIDYVFKVV+IGDSAVGKSQ+L+RF++NEF +SK+TIGVEFQTRT+ ++ K IKAQIWD
Sbjct: 10 KIDYVFKVVLIGDSAVGKSQLLARFSRNEFTLESKATIGVEFQTRTMVVDHKTIKAQIWD 69
Query: 84 TAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKS 143
TAGQERYRA+TSAYYRGA+GA+VVYDITKR +F+HV RW+EEL+ HAD++I ++L+GNKS
Sbjct: 70 TAGQERYRAITSAYYRGAVGALVVYDITKRPTFEHVTRWLEELKVHADNNIVVMLVGNKS 129
Query: 144 DLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNG 203
DL ++RAVS E+A + AE + LFF E SAL NVD+AFF +L EIY VSKK L G G
Sbjct: 130 DLGNLRAVSVEEAKDLAEREELFFMETSALEATNVDSAFFSVLTEIYRIVSKKSLSEGAG 189
Query: 204 KVDGPPMLAGSKIDVISGADLEISEMKKLSTCSC 237
GS+ I G L +SE K+ T C
Sbjct: 190 ---------GSQQVPIPGTTLLLSEKKESKTGCC 214
>gi|1381676|gb|AAB97114.1| small GTP-binding protein, partial [Glycine max]
Length = 222
Score = 267 bits (682), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 134/210 (63%), Positives = 160/210 (76%), Gaps = 2/210 (0%)
Query: 24 KIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWD 83
+IDYVFKVV+IGDSAVGKSQIL+RF +NEF DSKSTIGVEFQTRT+ I+ K +KAQIWD
Sbjct: 9 RIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKSTIGVEFQTRTLVIDHKTVKAQIWD 68
Query: 84 TAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKS 143
TAGQERYRAVTSAYYRGA+GA++VYDITKRQ+FDH+ RW+EELR HAD +I IIL GNK
Sbjct: 69 TAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHADKNIVIILTGNKC 128
Query: 144 DLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNG 203
DL + R V EDA EFAE +GLFF E SAL NV+TAF +L EIY V+KK L
Sbjct: 129 DLENQRDVPTEDAKEFAEKEGLFFLETSALEATNVETAFITVLTEIYNIVNKKNLTADEN 188
Query: 204 KVDG-PPMLAGSKIDVISGADLEISEMKKL 232
+ +G L+G KI ++ G EI + +
Sbjct: 189 QGNGNSASLSGQKI-IVPGPAQEIPAKRNM 217
>gi|225450193|ref|XP_002264293.1| PREDICTED: ras-related protein RGP1 [Vitis vinifera]
gi|297736218|emb|CBI24856.3| unnamed protein product [Vitis vinifera]
Length = 226
Score = 266 bits (681), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 136/215 (63%), Positives = 168/215 (78%), Gaps = 6/215 (2%)
Query: 24 KIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWD 83
KIDYVFKVV+IGDSAVGKSQ+L+RF +NEF DSK+TIGVEFQT+T+ I+ K +KAQIWD
Sbjct: 12 KIDYVFKVVLIGDSAVGKSQLLARFARNEFNLDSKATIGVEFQTKTLVIDHKTVKAQIWD 71
Query: 84 TAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKS 143
TAGQERYRAVTSAYYRGA+GA++VYDITKRQSFDHVARW++ELR HAD +I I+L+GNKS
Sbjct: 72 TAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLQELRGHADKNIVIMLVGNKS 131
Query: 144 DLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNG 203
DL ++AV EDA EFAE + LFF E SAL NV+TAF +L EIY +SKK L N
Sbjct: 132 DLGTLQAVPTEDAKEFAERENLFFMETSALEATNVETAFLSVLTEIYRIISKKTL-VANE 190
Query: 204 KVD---GPPMLAGSKIDVISGADLEISEMKKLSTC 235
+V+ +L G+KI ++ G + + SE K + C
Sbjct: 191 EVESGGNSSLLKGTKI-IVPGKEPK-SEGSKYNCC 223
>gi|356528455|ref|XP_003532818.1| PREDICTED: ras-related protein Rab11A-like [Glycine max]
Length = 209
Score = 266 bits (681), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 132/194 (68%), Positives = 153/194 (78%), Gaps = 1/194 (0%)
Query: 24 KIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWD 83
+IDYVFKVV+IGDSAVGKSQIL+RF +NEF DSKSTIGVEFQTRT+ I+ K +KAQIWD
Sbjct: 14 RIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKSTIGVEFQTRTLVIDHKTVKAQIWD 73
Query: 84 TAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKS 143
TAGQERYRAVTSAYYRGA+GA++VYDITKRQ+FDH+ RW+EELR HAD +I IILIGNK
Sbjct: 74 TAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHADKNIVIILIGNKC 133
Query: 144 DLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNG 203
DL R V EDA EFAE +GLFF E SAL NV+TAF +L EIY V+KK L
Sbjct: 134 DLESQRDVPTEDAKEFAEKEGLFFLETSALEATNVETAFITVLTEIYNIVNKKNLTADEN 193
Query: 204 KVDG-PPMLAGSKI 216
+ +G L+G KI
Sbjct: 194 QGNGNSASLSGQKI 207
>gi|225441694|ref|XP_002282798.1| PREDICTED: ras-related protein RABA4d [Vitis vinifera]
gi|147789804|emb|CAN62934.1| hypothetical protein VITISV_008844 [Vitis vinifera]
gi|297739720|emb|CBI29902.3| unnamed protein product [Vitis vinifera]
Length = 223
Score = 266 bits (681), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 134/203 (66%), Positives = 159/203 (78%), Gaps = 4/203 (1%)
Query: 24 KIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWD 83
KIDYVFKVV+IGDSAVGKSQ+L+RF +NEF DSK+TIGVEFQT+T+ I+ K +KAQIWD
Sbjct: 11 KIDYVFKVVLIGDSAVGKSQLLARFARNEFNVDSKATIGVEFQTKTLAIDQKAVKAQIWD 70
Query: 84 TAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKS 143
TAGQERYRAVTSAYYRGA+GA++VYD+TKRQSFDH+ARW+EELR HAD +I I+LIGNKS
Sbjct: 71 TAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKNIVIMLIGNKS 130
Query: 144 DLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNG 203
DL +RAV EDA EFAE + LFF E SAL NV+TAF +L +IY +SKK L N
Sbjct: 131 DLGSLRAVPTEDAQEFAERENLFFMETSALEATNVETAFLTVLTDIYKIISKKTL-TANT 189
Query: 204 KVD---GPPMLAGSKIDVISGAD 223
D +L G+KI V G D
Sbjct: 190 DTDSTGSSTLLKGTKIIVPGGPD 212
>gi|303738|dbj|BAA02110.1| GTP-binding protein [Pisum sativum]
gi|738935|prf||2001457C GTP-binding protein
Length = 225
Score = 266 bits (680), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 136/213 (63%), Positives = 162/213 (76%), Gaps = 4/213 (1%)
Query: 24 KIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWD 83
+IDYVFKVV+IGDSAVGKSQIL+RF++NEF DSKSTIGVEFQTRT+ I+ K +KAQIWD
Sbjct: 13 RIDYVFKVVLIGDSAVGKSQILARFSRNEFSLDSKSTIGVEFQTRTLVIDHKTVKAQIWD 72
Query: 84 TAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKS 143
TAGQERYRAVTSAYYRGA+GA++VYDITKRQ+FDH+ RW+EELR HAD +I IIL+GNKS
Sbjct: 73 TAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHADKNIVIILVGNKS 132
Query: 144 DLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNG 203
DL + R V EDA EFAE +GLFF E SAL NV+ +F +L EIY ++KK L
Sbjct: 133 DLENQRDVPTEDAKEFAEKEGLFFLETSALQATNVEASFMTVLTEIYNILNKKNLAADES 192
Query: 204 KVDG-PPMLAGSKIDVISGADLEISEMKKLSTC 235
+ +G L G KI VI G E+ K S C
Sbjct: 193 QGNGNSASLLGQKI-VIPGPGQEVP--AKSSMC 222
>gi|297791923|ref|XP_002863846.1| small molecular weight G-protein 1 [Arabidopsis lyrata subsp.
lyrata]
gi|297309681|gb|EFH40105.1| small molecular weight G-protein 1 [Arabidopsis lyrata subsp.
lyrata]
Length = 223
Score = 266 bits (680), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 134/204 (65%), Positives = 163/204 (79%), Gaps = 3/204 (1%)
Query: 24 KIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWD 83
KIDYVFKVV+IGDSAVGKSQ+L+RF++NEF +SK+TIGVEFQTRT+ I+ K IKAQIWD
Sbjct: 11 KIDYVFKVVLIGDSAVGKSQLLARFSRNEFSIESKATIGVEFQTRTLEIDHKTIKAQIWD 70
Query: 84 TAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKS 143
TAGQERYRAVTSAYYRGA+GA++VYDITKRQSFDHVARW+EELR HAD +I I+LIGNK+
Sbjct: 71 TAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKNIVIMLIGNKT 130
Query: 144 DLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNG 203
DL +RAV EDA EFA+ + LFF E SAL+ +NV+ +F +L EIY VSKK L
Sbjct: 131 DLGTLRAVPTEDAKEFAQRENLFFMETSALDSNNVEPSFLTVLTEIYRIVSKKNLVANEE 190
Query: 204 KVDG--PPMLAGSKIDVISGADLE 225
G +L G+KI V++G + E
Sbjct: 191 GESGGDSSLLQGTKI-VVAGEETE 213
>gi|242044174|ref|XP_002459958.1| hypothetical protein SORBIDRAFT_02g018890 [Sorghum bicolor]
gi|241923335|gb|EER96479.1| hypothetical protein SORBIDRAFT_02g018890 [Sorghum bicolor]
Length = 226
Score = 266 bits (680), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 137/215 (63%), Positives = 164/215 (76%), Gaps = 7/215 (3%)
Query: 24 KIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWD 83
+IDYVFKVV+IGDSAVGKSQ+L+RF +NEF DSK+TIGVEFQTRT+ I+ + +KAQIWD
Sbjct: 13 RIDYVFKVVLIGDSAVGKSQLLARFARNEFNLDSKATIGVEFQTRTLNIDARTVKAQIWD 72
Query: 84 TAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKS 143
TAGQERYRAVTSAYYRGA+GA++VYDITKRQSFDHVARW+EELR HAD +I I+LIGNKS
Sbjct: 73 TAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKNIVIMLIGNKS 132
Query: 144 DLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNG 203
DL +R+V+ EDA EFAE + LFF E SAL NV+ AF +L EIY VSKK L N
Sbjct: 133 DLGTLRSVATEDAKEFAERENLFFMETSALEAVNVENAFMTVLTEIYRVVSKKNL-VANE 191
Query: 204 KVD---GPPMLAGSKIDVISGADLEISEMKKLSTC 235
+ D +L G+KI V+ G E K + C
Sbjct: 192 ESDSSGNSSLLKGTKI-VVPGQ--EPPPTSKATCC 223
>gi|15238852|ref|NP_199607.1| RAB GTPase homolog A4C [Arabidopsis thaliana]
gi|75333691|sp|Q9FE79.1|RAA4C_ARATH RecName: Full=Ras-related protein RABA4c; Short=AtRABA4c; AltName:
Full=Ras-related protein SMG1
gi|12004623|gb|AAG44121.1|AF218121_1 small molecular weight g-protein [Arabidopsis thaliana]
gi|9758522|dbj|BAB09048.1| RAS superfamily GTP-binding protein-like [Arabidopsis thaliana]
gi|89111906|gb|ABD60725.1| At5g47960 [Arabidopsis thaliana]
gi|332008216|gb|AED95599.1| RAB GTPase homolog A4C [Arabidopsis thaliana]
Length = 223
Score = 266 bits (679), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 134/204 (65%), Positives = 163/204 (79%), Gaps = 3/204 (1%)
Query: 24 KIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWD 83
KIDYVFKVV+IGDSAVGKSQ+L+RF++NEF +SK+TIGVEFQTRT+ I+ K IKAQIWD
Sbjct: 11 KIDYVFKVVLIGDSAVGKSQLLARFSRNEFSIESKATIGVEFQTRTLEIDRKTIKAQIWD 70
Query: 84 TAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKS 143
TAGQERYRAVTSAYYRGA+GA++VYDITKRQSFDHVARW+EELR HAD +I I+LIGNK+
Sbjct: 71 TAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKNIVIMLIGNKT 130
Query: 144 DLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNG 203
DL +RAV EDA EFA+ + LFF E SAL+ +NV+ +F +L EIY VSKK L
Sbjct: 131 DLGTLRAVPTEDAKEFAQRENLFFMETSALDSNNVEPSFLTVLTEIYRIVSKKNLVANEE 190
Query: 204 KVDG--PPMLAGSKIDVISGADLE 225
G +L G+KI V++G + E
Sbjct: 191 GESGGDSSLLQGTKI-VVAGEETE 213
>gi|116789126|gb|ABK25126.1| unknown [Picea sitchensis]
Length = 224
Score = 266 bits (679), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 132/214 (61%), Positives = 169/214 (78%), Gaps = 2/214 (0%)
Query: 24 KIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWD 83
+IDYVFK+V+IGDSAVGKSQ+L+RF +NEF DSK+TIGVEFQTRT+ I+ K +KAQIWD
Sbjct: 11 RIDYVFKIVLIGDSAVGKSQLLARFARNEFSLDSKATIGVEFQTRTLVIDHKTVKAQIWD 70
Query: 84 TAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKS 143
TAGQERYRAVTSAYYRGA+GA++VYDITKRQ+FDHVARW+EELR HAD++I I+LIGNK
Sbjct: 71 TAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHVARWLEELRGHADNNIVIMLIGNKC 130
Query: 144 DLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNG 203
DL ++RAV EDA EFA+ +GLFF E SAL NV++AF +L +IY +SKK L +
Sbjct: 131 DLGNLRAVPIEDAREFAQREGLFFLETSALEAINVESAFLTVLTDIYRIISKKALIANDD 190
Query: 204 KVDG-PPMLAGSKIDVISGADLEISEMKKLSTCS 236
+ +G +L G+K+ V+ G + ++S K S
Sbjct: 191 QGNGNSALLTGTKL-VVPGEEQDVSTNNKYCCSS 223
>gi|357157821|ref|XP_003577924.1| PREDICTED: ras-related protein RGP1-like isoform 2 [Brachypodium
distachyon]
Length = 227
Score = 265 bits (678), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 132/200 (66%), Positives = 156/200 (78%), Gaps = 4/200 (2%)
Query: 22 PDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQI 81
P +IDYVFKVV+IGDSAVGKSQ+L+RF +NEF DSK+TIGVEFQTRT+ ++ + IKAQI
Sbjct: 12 PKRIDYVFKVVLIGDSAVGKSQLLARFARNEFSLDSKATIGVEFQTRTLQVDQRTIKAQI 71
Query: 82 WDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGN 141
WDTAGQERYRAVTSAYYRGA+GA++VYDITKRQSFDH+ARW+EELRAHAD ++ I+LIGN
Sbjct: 72 WDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHMARWLEELRAHADKNLVIMLIGN 131
Query: 142 KSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECG 201
KSDL +R V EDA EFA + LFF E SAL NV+ AF L EIY VSKK L
Sbjct: 132 KSDLGTLRVVPTEDAKEFAARESLFFMETSALEATNVENAFRTALTEIYRNVSKKNL-VA 190
Query: 202 NGKVD---GPPMLAGSKIDV 218
N + D +L G+KI V
Sbjct: 191 NEETDSSGNSSLLKGTKIIV 210
>gi|217071438|gb|ACJ84079.1| unknown [Medicago truncatula]
Length = 225
Score = 265 bits (677), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 134/204 (65%), Positives = 158/204 (77%), Gaps = 2/204 (0%)
Query: 24 KIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWD 83
+IDYVFKVV+IGDSAVGKSQIL+RF+ NEF DSKSTIGVEFQTRT+ I+ K +KAQIWD
Sbjct: 13 RIDYVFKVVLIGDSAVGKSQILARFSGNEFSLDSKSTIGVEFQTRTLVIDHKTVKAQIWD 72
Query: 84 TAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKS 143
TAGQERYRAVTSAYYRGA+GA++VYDITKRQ+FDH+ RW+EELR HAD +I IIL+GNKS
Sbjct: 73 TAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHADKNIVIILVGNKS 132
Query: 144 DLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNG 203
DL + R V EDA EFAE +GLFF E SAL NV+ +F +L EIY V+KK L
Sbjct: 133 DLENQRDVPTEDAKEFAEKEGLFFLETSALQATNVEASFMTVLTEIYNIVNKKNLAADES 192
Query: 204 KVDG-PPMLAGSKIDVISGADLEI 226
+ +G L G KI +I G EI
Sbjct: 193 QGNGNSASLLGQKI-IIPGPAQEI 215
>gi|255632197|gb|ACU16457.1| unknown [Glycine max]
Length = 229
Score = 264 bits (675), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 133/210 (63%), Positives = 159/210 (75%), Gaps = 2/210 (0%)
Query: 24 KIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWD 83
+IDYVFKVV+IGDSAVGKSQIL+RF +NEF DSKSTIGVEFQTRT+ I+ K +KAQIWD
Sbjct: 16 RIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKSTIGVEFQTRTLVIDHKTVKAQIWD 75
Query: 84 TAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKS 143
TAGQERYRAVTSAYYRGA+GA++VYDITKRQ+FDH+ RW+EELR HAD +I IIL GNK
Sbjct: 76 TAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHADKNIVIILTGNKC 135
Query: 144 DLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNG 203
DL + R V DA EFAE +GLFF E SAL NV+TAF +L EIY V+KK L
Sbjct: 136 DLENQRDVPTGDAKEFAEKEGLFFLETSALEATNVETAFITVLTEIYNIVNKKNLTADEN 195
Query: 204 KVDG-PPMLAGSKIDVISGADLEISEMKKL 232
+ +G L+G KI ++ G EI + +
Sbjct: 196 QGNGNSASLSGQKI-IVPGPAQEIPAKRNM 224
>gi|224139832|ref|XP_002323298.1| predicted protein [Populus trichocarpa]
gi|222867928|gb|EEF05059.1| predicted protein [Populus trichocarpa]
Length = 218
Score = 264 bits (675), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 127/197 (64%), Positives = 156/197 (79%)
Query: 24 KIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWD 83
KIDYVFK+V+IGDSAVGKSQ+L+RF +NEF DSK+TIGVEFQT+T+ ++ K +KAQIWD
Sbjct: 10 KIDYVFKIVLIGDSAVGKSQLLARFARNEFTVDSKATIGVEFQTKTLAMHNKTVKAQIWD 69
Query: 84 TAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKS 143
TAGQERYRAVTSAYYRGA+GA++VYD+TKRQSFDH+ARW+EELR HAD SI I+LIGNK
Sbjct: 70 TAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKSIIIMLIGNKC 129
Query: 144 DLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNG 203
DL +RAV AEDA EFA+ + LFF E SAL NV+TAF +L EIY +SK+ L +
Sbjct: 130 DLGSLRAVPAEDAKEFAQRENLFFMETSALEATNVETAFLTMLTEIYRIISKRTLAGNDE 189
Query: 204 KVDGPPMLAGSKIDVIS 220
+ G++I V S
Sbjct: 190 SNENSGAFKGTRILVPS 206
>gi|15230422|ref|NP_187823.1| RAB GTPase-like protein A4D [Arabidopsis thaliana]
gi|297834018|ref|XP_002884891.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|75334990|sp|Q9LH50.1|RAA4D_ARATH RecName: Full=Ras-related protein RABA4d; Short=AtRABA4d
gi|12322042|gb|AAG51065.1|AC069472_5 ras-related GTP-binding protein; 5118-4176 [Arabidopsis thaliana]
gi|9294115|dbj|BAB01966.1| GTP-binding protein-like [Arabidopsis thaliana]
gi|67633628|gb|AAY78738.1| Ras-related GTP-binding family protein [Arabidopsis thaliana]
gi|297330731|gb|EFH61150.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|332641639|gb|AEE75160.1| RAB GTPase-like protein A4D [Arabidopsis thaliana]
Length = 222
Score = 264 bits (675), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 128/198 (64%), Positives = 158/198 (79%), Gaps = 1/198 (0%)
Query: 24 KIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWD 83
KIDYVFKVV+IGDSAVGK+Q+L+RF +NEF DSK+TIGVEFQT+T+ I+ K +KAQIWD
Sbjct: 11 KIDYVFKVVLIGDSAVGKTQLLARFARNEFSVDSKATIGVEFQTKTLVIDNKTVKAQIWD 70
Query: 84 TAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKS 143
TAGQERYRAVTSAYYRGA+GA++VYD+TKRQSFDH+A+W+EELR HAD +I I+LIGNK
Sbjct: 71 TAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMAKWLEELRGHADKNIVIMLIGNKC 130
Query: 144 DLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNG 203
DL +RAV EDA EFA+ + LFF E SAL NV+TAF +L EIY +SKK L +
Sbjct: 131 DLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTILTEIYRIISKKSLTADDD 190
Query: 204 KVDG-PPMLAGSKIDVIS 220
DG +L G++I + S
Sbjct: 191 DADGNSSLLKGTRIIIPS 208
>gi|224055257|ref|XP_002298447.1| predicted protein [Populus trichocarpa]
gi|222845705|gb|EEE83252.1| predicted protein [Populus trichocarpa]
Length = 225
Score = 264 bits (674), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 129/196 (65%), Positives = 157/196 (80%), Gaps = 1/196 (0%)
Query: 24 KIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWD 83
KIDYVFK+V+IGDSAVGKSQ+L+RF +NEF DSK+TIGVEFQT+T+ I+ K +KAQIWD
Sbjct: 12 KIDYVFKIVLIGDSAVGKSQLLARFARNEFSLDSKATIGVEFQTKTLVIDHKTVKAQIWD 71
Query: 84 TAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKS 143
TAGQERYRAVTSAYYRGA+GA++VYDITKRQSFDHVA+W+EELR HAD++I I+LIGNKS
Sbjct: 72 TAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVAKWLEELRDHADNNIVIMLIGNKS 131
Query: 144 DLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNG 203
DL +RAV EDA EFA+ + LFF E SAL NV++AF +L EIY +SKK L
Sbjct: 132 DLGTLRAVPTEDAKEFAQKENLFFMETSALEATNVESAFLSVLTEIYRVISKKALIANEQ 191
Query: 204 KVDG-PPMLAGSKIDV 218
+ G +L G+ I V
Sbjct: 192 ESGGSSSLLKGTNIVV 207
>gi|297741822|emb|CBI33135.3| unnamed protein product [Vitis vinifera]
Length = 195
Score = 263 bits (673), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 127/175 (72%), Positives = 146/175 (83%)
Query: 24 KIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWD 83
KIDYVFKVV+IGDSAVGKSQIL+RF +NEF DSK+TIGVEFQTRT+ I K +KAQIWD
Sbjct: 13 KIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWD 72
Query: 84 TAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKS 143
TAGQERYRAVTSAYYRGA+GA++VYDITKRQSFDH+ RW+EELR HAD +I IILIGNK+
Sbjct: 73 TAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHIPRWLEELRGHADKNIVIILIGNKT 132
Query: 144 DLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL 198
DL + RAV EDA EFAE +GLFF E SAL NV+ AF +L EI+ V+KK L
Sbjct: 133 DLEEQRAVPTEDAKEFAEKEGLFFLETSALEATNVENAFLTVLTEIFNIVNKKNL 187
>gi|414589235|tpg|DAA39806.1| TPA: ras protein RGP1 [Zea mays]
Length = 226
Score = 263 bits (672), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 133/203 (65%), Positives = 160/203 (78%), Gaps = 5/203 (2%)
Query: 24 KIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWD 83
+IDYVFKVV+IGDSAVGKSQ+L+RF +N+F DSK+TIGVEFQTRT+ I+ + +KAQIWD
Sbjct: 13 RIDYVFKVVLIGDSAVGKSQLLARFARNQFNLDSKATIGVEFQTRTLNIDARNVKAQIWD 72
Query: 84 TAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKS 143
TAGQERYRAVTSAYYRGA+GA++VYDITKRQSFDHVARW+EELR HAD +I I+L+GNKS
Sbjct: 73 TAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKNIVIMLMGNKS 132
Query: 144 DLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNG 203
DL +RAV EDA EFAE + LFF E SAL NV+ AF +L EIY VSKK L N
Sbjct: 133 DLGTLRAVPIEDAKEFAERENLFFMETSALEAINVENAFMTVLTEIYRTVSKKNL-VANE 191
Query: 204 KVD---GPPMLAGSKIDVISGAD 223
+ D +L G+KI V+ G +
Sbjct: 192 EPDSSGNSSLLKGTKI-VVPGQE 213
>gi|255583280|ref|XP_002532404.1| protein with unknown function [Ricinus communis]
gi|223527900|gb|EEF29989.1| protein with unknown function [Ricinus communis]
Length = 223
Score = 263 bits (671), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 130/203 (64%), Positives = 162/203 (79%), Gaps = 5/203 (2%)
Query: 24 KIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWD 83
KIDYVFK+V+IGDSAVGKSQ+L+RF +NEF DSK+TIGVEFQT+T++I+ K +KAQIWD
Sbjct: 10 KIDYVFKIVLIGDSAVGKSQLLARFARNEFCVDSKATIGVEFQTKTLSIDNKTVKAQIWD 69
Query: 84 TAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKS 143
TAGQERYRAVTSAYYRGA+GA++VYD+TKRQSFDH+ARW+EELR HAD +I I+LIGNK
Sbjct: 70 TAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKNIVIMLIGNKC 129
Query: 144 DLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNG 203
DL +RAV EDA EFA+ + LFF E SAL NV+TAF +L EIY +SKK L N
Sbjct: 130 DLGSLRAVPIEDAQEFAQRENLFFMETSALESTNVETAFLTVLTEIYRVISKKTL-TANE 188
Query: 204 KVD---GPPMLAGSKIDVISGAD 223
++D +L G++I ++ G D
Sbjct: 189 ELDTNGTSGLLKGTRI-IVPGHD 210
>gi|115469954|ref|NP_001058576.1| Os06g0714600 [Oryza sativa Japonica Group]
gi|53791772|dbj|BAD53566.1| putative PRA2 [Oryza sativa Japonica Group]
gi|113596616|dbj|BAF20490.1| Os06g0714600 [Oryza sativa Japonica Group]
gi|125556744|gb|EAZ02350.1| hypothetical protein OsI_24454 [Oryza sativa Indica Group]
gi|125598494|gb|EAZ38274.1| hypothetical protein OsJ_22652 [Oryza sativa Japonica Group]
Length = 225
Score = 262 bits (670), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 141/221 (63%), Positives = 175/221 (79%), Gaps = 10/221 (4%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
DYVFKVVVIGDSAVGK+Q+L RFTK+EFF DSKSTIG+EFQTRTV I GK +KAQIWDTA
Sbjct: 5 DYVFKVVVIGDSAVGKTQLLGRFTKDEFFIDSKSTIGIEFQTRTVEIGGKRVKAQIWDTA 64
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQERYRAVTSAYYRGALGA++VYD+T R+SF H ARW+ +LRAHAD+SI ++LIGNK+DL
Sbjct: 65 GQERYRAVTSAYYRGALGAMLVYDVTSRRSFHHAARWLHDLRAHADNSIVVMLIGNKADL 124
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNGKV 205
RAV+A++A FAEDQGLFFSEASAL+GDNV+ AF LL+EI+ VS++ L +G +
Sbjct: 125 SHARAVAADEAAAFAEDQGLFFSEASALSGDNVEEAFLGLLREIHAIVSRRSLLEMDG-I 183
Query: 206 DGPP--------MLAGSKIDVISGAD-LEISEMKKLSTCSC 237
+G ML G+K+ + +E S +K++S CSC
Sbjct: 184 NGDAAANANAALMLRGTKLSLSDELSIMETSAIKRVSRCSC 224
>gi|168001936|ref|XP_001753670.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162695077|gb|EDQ81422.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 221
Score = 262 bits (669), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 132/214 (61%), Positives = 167/214 (78%), Gaps = 3/214 (1%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
+KIDYVFKVV+IGDSAVGKSQ+LSRF++NEF +SK+TIGVEFQTRT+ ++ K IKAQIW
Sbjct: 10 NKIDYVFKVVLIGDSAVGKSQLLSRFSRNEFSLESKATIGVEFQTRTIVVDHKTIKAQIW 69
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRAVTSAYYRGA+GA++VYDITK+QSFDHV RW+EELRAHAD++I I+LIGNK
Sbjct: 70 DTAGQERYRAVTSAYYRGAVGAMLVYDITKQQSFDHVQRWLEELRAHADANIVIMLIGNK 129
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
SDL ++R V + A +AE + L F E SA+ NV+TAF+ +L EIY VSK L +
Sbjct: 130 SDLSNLRQVDTDVARVYAEKEKLSFLETSAMESTNVETAFYAVLSEIYKIVSKNAL-IAD 188
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
G P+L+G+KI++ D+ S K+ CS
Sbjct: 189 ENQGGTPLLSGTKINLTDKDDVIGS--KRAGCCS 220
>gi|3024503|sp|Q40520.1|RB11C_TOBAC RecName: Full=Ras-related protein Rab11C
gi|623576|gb|AAA74112.1| putative [Nicotiana tabacum]
Length = 222
Score = 261 bits (666), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 128/196 (65%), Positives = 152/196 (77%), Gaps = 1/196 (0%)
Query: 24 KIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWD 83
KIDYVFKVV+IGDSAVGK+QIL+RF +NEF DSK+TIGVEFQTRT+ I K +KAQIWD
Sbjct: 11 KIDYVFKVVLIGDSAVGKTQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWD 70
Query: 84 TAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKS 143
TAGQERYRAVTSAYYRGA+GA++VYDITKRQ+FDH+ RW+EELRAHAD +I I+L GNK+
Sbjct: 71 TAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRAHADRNIVIMLTGNKT 130
Query: 144 DLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECG-N 202
DL D RAV EDA EFA+ +GLFF E SA+ ++ AF +L EI+ V+KK L N
Sbjct: 131 DLEDQRAVPTEDAKEFAQKEGLFFLETSAMEATKLEDAFLTVLTEIFNIVNKKNLAADEN 190
Query: 203 GKVDGPPMLAGSKIDV 218
P L G KI V
Sbjct: 191 QSNSNPASLTGKKILV 206
>gi|388498830|gb|AFK37481.1| unknown [Medicago truncatula]
Length = 223
Score = 261 bits (666), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 128/198 (64%), Positives = 160/198 (80%), Gaps = 4/198 (2%)
Query: 24 KIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWD 83
KIDYVFKVV+IGDSAVGK+Q+L+RF++N+F DSK+TIGVEFQT+T+ I+ K +KAQIWD
Sbjct: 11 KIDYVFKVVLIGDSAVGKTQLLARFSRNQFNVDSKATIGVEFQTKTLVIDNKTVKAQIWD 70
Query: 84 TAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKS 143
TAGQERYRAVTSAYYRGA+GA++VYD+TKRQSFDH+ARW+EELR HAD++I I+LIGNK
Sbjct: 71 TAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADTNIVIMLIGNKC 130
Query: 144 DLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNG 203
DL ++AV EDA EFA+ + LFF E SAL NV+TAF +L EIY +SKK L N
Sbjct: 131 DLGTLKAVPTEDAQEFAQRENLFFMETSALESTNVETAFLTILTEIYRLISKKTL-TAND 189
Query: 204 KVD---GPPMLAGSKIDV 218
+ D G +L G++I V
Sbjct: 190 EADPGGGSGLLKGTRIIV 207
>gi|356541333|ref|XP_003539132.1| PREDICTED: ras-related protein RABA4d-like [Glycine max]
Length = 223
Score = 260 bits (665), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 126/195 (64%), Positives = 154/195 (78%)
Query: 24 KIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWD 83
KIDYVFKVV+IGDSAVGK+Q+L+RF +NEF DSK+TIGVEFQT+T+ I+ KIIKAQIWD
Sbjct: 11 KIDYVFKVVLIGDSAVGKTQLLARFARNEFSLDSKATIGVEFQTKTLIIDNKIIKAQIWD 70
Query: 84 TAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKS 143
TAGQERYRAVTSAYYRGA+GA++VYD+TKRQSFDH+ +W+EELR HAD +I I+LIGNK
Sbjct: 71 TAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMVKWLEELRGHADQNIVIMLIGNKC 130
Query: 144 DLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNG 203
DL +RAV EDA E A+ + LFF E SAL NV+T F +L EIY +KK L +
Sbjct: 131 DLGSLRAVPMEDAEELAQRENLFFMETSALESTNVETCFLTILTEIYRIHAKKSLTTSDD 190
Query: 204 KVDGPPMLAGSKIDV 218
+ G +L GS+I V
Sbjct: 191 DIGGSGLLKGSRIIV 205
>gi|226531496|ref|NP_001146862.1| LOC100280470 [Zea mays]
gi|195604390|gb|ACG24025.1| ras-related protein RGP1 [Zea mays]
Length = 226
Score = 260 bits (664), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 132/203 (65%), Positives = 159/203 (78%), Gaps = 5/203 (2%)
Query: 24 KIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWD 83
+IDYVFKVV+IGDSA GKSQ+L+RF +N+F DSK+TIGVEFQTRT+ I+ + +KAQIWD
Sbjct: 13 RIDYVFKVVLIGDSAGGKSQLLARFARNQFNLDSKATIGVEFQTRTLNIDARNVKAQIWD 72
Query: 84 TAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKS 143
TAGQERYRAVTSAYYRGA+GA++VYDITKRQSFDHVARW+EELR HAD +I I+L+GNKS
Sbjct: 73 TAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKNIVIMLMGNKS 132
Query: 144 DLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNG 203
DL +RAV EDA EFAE + LFF E SAL NV+ AF +L EIY VSKK L N
Sbjct: 133 DLGTLRAVPIEDAKEFAERENLFFMETSALEAINVENAFMTVLTEIYRTVSKKNL-VANE 191
Query: 204 KVD---GPPMLAGSKIDVISGAD 223
+ D +L G+KI V+ G +
Sbjct: 192 EPDSSGNSSLLKGTKI-VVPGQE 213
>gi|357157817|ref|XP_003577923.1| PREDICTED: ras-related protein RGP1-like isoform 1 [Brachypodium
distachyon]
Length = 226
Score = 260 bits (664), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 131/201 (65%), Positives = 156/201 (77%), Gaps = 4/201 (1%)
Query: 21 IPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQ 80
+ +IDYVFKVV+IGDSAVGKSQ+L+RF +NEF DSK+TIGVEFQTRT+ ++ + IKAQ
Sbjct: 10 VGQRIDYVFKVVLIGDSAVGKSQLLARFARNEFSLDSKATIGVEFQTRTLQVDQRTIKAQ 69
Query: 81 IWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIG 140
IWDTAGQERYRAVTSAYYRGA+GA++VYDITKRQSFDH+ARW+EELRAHAD ++ I+LIG
Sbjct: 70 IWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHMARWLEELRAHADKNLVIMLIG 129
Query: 141 NKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELEC 200
NKSDL +R V EDA EFA + LFF E SAL NV+ AF L EIY VSKK L
Sbjct: 130 NKSDLGTLRVVPTEDAKEFAARESLFFMETSALEATNVENAFRTALTEIYRNVSKKNL-V 188
Query: 201 GNGKVD---GPPMLAGSKIDV 218
N + D +L G+KI V
Sbjct: 189 ANEETDSSGNSSLLKGTKIIV 209
>gi|449463769|ref|XP_004149604.1| PREDICTED: ras-related protein RABA4c-like [Cucumis sativus]
Length = 222
Score = 259 bits (661), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 131/203 (64%), Positives = 158/203 (77%), Gaps = 5/203 (2%)
Query: 24 KIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWD 83
KIDYVFKVV+IGDSAVGKSQ+LSRF +NEF DSK+TIGVEFQT+T+ I+ K IKAQIWD
Sbjct: 11 KIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLNIDQKAIKAQIWD 70
Query: 84 TAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKS 143
TAGQERYRAVTSAYYRGA+GA++VYD+TKRQ+FDH+ARW+EELR HAD +I I+LIGNKS
Sbjct: 71 TAGQERYRAVTSAYYRGAVGAMLVYDMTKRQTFDHIARWLEELRGHADKNIVIMLIGNKS 130
Query: 144 DLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNG 203
DL +R V EDA EFA+ + L F E SAL NV+ AF +L EIY +SKK L N
Sbjct: 131 DLGSLRVVPTEDAKEFAQMENLSFMETSALEATNVEAAFNTILTEIYRVISKKAL-IAND 189
Query: 204 KVD---GPPMLAGSKIDVISGAD 223
+ D +L G+KI V+ G +
Sbjct: 190 ETDSGGSSSLLKGTKI-VVPGQE 211
>gi|356537347|ref|XP_003537189.1| PREDICTED: ras-related protein RABA4d-like [Glycine max]
Length = 310
Score = 258 bits (659), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 129/217 (59%), Positives = 163/217 (75%), Gaps = 9/217 (4%)
Query: 24 KIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWD 83
KIDYVFKVV+IGDSAVGK+Q+L+RF KN+F DSK+TIGVEFQT+T+ I+ K +KAQIWD
Sbjct: 97 KIDYVFKVVLIGDSAVGKTQLLARFAKNQFSVDSKATIGVEFQTKTLIIDNKTVKAQIWD 156
Query: 84 TAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKS 143
TAGQERYRAVTSAYYRGA+GA++VYD+TKRQSFD++A+W+EELR HAD +I ++LIGNK
Sbjct: 157 TAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDNMAKWLEELRGHADKNIVVMLIGNKC 216
Query: 144 DLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNG 203
DL +RAV EDA EFA+ + LFF E SAL NV+TAF +L EIY +SKK L +
Sbjct: 217 DLGTLRAVPTEDAEEFAQRENLFFMETSALESTNVETAFLTILTEIYRLISKKTLTAND- 275
Query: 204 KVDGPP-----MLAGSKIDVISGADLEISEMKKLSTC 235
D P +L G+KI ++ ++ E K C
Sbjct: 276 --DADPSGISGLLKGTKI-IVPSQEINAGEKKGKGGC 309
>gi|20356|emb|CAA41966.1| GTP-binding protein [Oryza sativa]
gi|228209|prf||1718315A GTP-binding protein
Length = 226
Score = 257 bits (657), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 136/218 (62%), Positives = 162/218 (74%), Gaps = 7/218 (3%)
Query: 21 IPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQ 80
+ KIDYVFKVV+IGDSAVGKSQ+L+ F +NEF DSK+TIGVEFQTRT+ I+ + +KAQ
Sbjct: 11 VGQKIDYVFKVVLIGDSAVGKSQLLAGFARNEFNLDSKATIGVEFQTRTLHIDARTVKAQ 70
Query: 81 IWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIG 140
DTAGQERYRAVTSAYYRGA+GA++VYDITKRQSFDHVARW+EELR HAD +I I+LIG
Sbjct: 71 TRDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKNIVIMLIG 130
Query: 141 NKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELEC 200
NKSDL +R V EDA EFAE + LFF E SAL N++ AF +L EIY VSKK L
Sbjct: 131 NKSDLGTLRVVPTEDAKEFAERENLFFMETSALESTNLENAFMTVLTEIYRIVSKKNL-V 189
Query: 201 GNGKVD---GPPMLAGSKIDVISGADLEISEMKKLSTC 235
N +VD +L G+KI V+ G E + K S C
Sbjct: 190 ANEEVDSSGNSSLLKGTKI-VVPGQ--EPAPPTKASCC 224
>gi|449530588|ref|XP_004172276.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein RABA4c-like
[Cucumis sativus]
Length = 222
Score = 257 bits (656), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 128/195 (65%), Positives = 153/195 (78%), Gaps = 4/195 (2%)
Query: 24 KIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWD 83
KIDYVFKVV+IGDSAVGKSQ+LSRF +NEF DSK+TIGVEFQT+T+ I+ K IKAQIWD
Sbjct: 11 KIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLNIDQKAIKAQIWD 70
Query: 84 TAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKS 143
TAGQERYRAVTSAYYRGA+GA++VYD+TKRQ+FDH+ARW+EELR HAD +I I+LIGNKS
Sbjct: 71 TAGQERYRAVTSAYYRGAVGAMLVYDMTKRQTFDHIARWLEELRGHADKNIVIMLIGNKS 130
Query: 144 DLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNG 203
DL +R V EDA EFA+ + L F E SAL NV+ AF +L EIY +SKK L N
Sbjct: 131 DLGSLRVVPTEDAKEFAQMENLSFMETSALEATNVEAAFNTILTEIYRVISKKAL-IAND 189
Query: 204 KVD---GPPMLAGSK 215
+ D +L G+K
Sbjct: 190 ETDSGGSSSLLKGTK 204
>gi|388504040|gb|AFK40086.1| unknown [Lotus japonicus]
Length = 199
Score = 256 bits (655), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 119/179 (66%), Positives = 149/179 (83%)
Query: 24 KIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWD 83
KIDYVFKVV+IGDSAVGK+Q+L+RF++N+F DSK+TIGVEFQT+T+ I+ K +KAQIWD
Sbjct: 11 KIDYVFKVVLIGDSAVGKTQLLARFSRNQFNVDSKATIGVEFQTKTLVIDSKTVKAQIWD 70
Query: 84 TAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKS 143
TAGQERYRAVTSAYYRGA+GA++VYD+TKRQSFDH+A+W+EELR HAD++I I+LIGNK
Sbjct: 71 TAGQERYRAVTSAYYRGAVGAMLVYDLTKRQSFDHMAKWLEELRGHADTNIVIMLIGNKC 130
Query: 144 DLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
DL ++AV EDA EFA+ + LFF E SAL NV+TAF +L EIY + KK L +
Sbjct: 131 DLATLKAVPTEDAQEFAQRENLFFMETSALESTNVETAFLTILTEIYRLIGKKTLTAND 189
>gi|356495927|ref|XP_003516822.1| PREDICTED: ras-related protein RABA4d-like [Glycine max]
Length = 223
Score = 256 bits (654), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 126/195 (64%), Positives = 152/195 (77%)
Query: 24 KIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWD 83
KIDYVFKVV+IGDSAVGK+Q+L+RF +NEF DSK+TIGVEFQT+T+ I+ K IKAQIWD
Sbjct: 11 KIDYVFKVVLIGDSAVGKTQLLARFARNEFSLDSKATIGVEFQTKTLIIDNKTIKAQIWD 70
Query: 84 TAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKS 143
TAGQERYRAVTSAYYRGA+GA++VYD+TKRQSFDH+ RW+EELR HAD +I I+LIGNK
Sbjct: 71 TAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMVRWLEELRGHADQNIVIMLIGNKC 130
Query: 144 DLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNG 203
DL +RAV EDA E A+ + LFF E SAL NV+T F +L EIY +KK L +
Sbjct: 131 DLGSLRAVPMEDAEEVAQRENLFFMETSALESTNVETCFLTILTEIYRIHAKKSLTASDD 190
Query: 204 KVDGPPMLAGSKIDV 218
G +L GS+I V
Sbjct: 191 DNWGSGLLKGSRIIV 205
>gi|356500461|ref|XP_003519050.1| PREDICTED: ras-related protein RABA4d-like [Glycine max]
Length = 222
Score = 254 bits (650), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 127/212 (59%), Positives = 161/212 (75%), Gaps = 9/212 (4%)
Query: 24 KIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWD 83
KIDYVFKVV++GDSAVGK+Q+L+RF KN+F DSK+TIGVEFQT+T+ I+ K +KAQIWD
Sbjct: 11 KIDYVFKVVLVGDSAVGKTQLLARFAKNQFNVDSKATIGVEFQTKTLIIDKKTVKAQIWD 70
Query: 84 TAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKS 143
TAGQERYRAVTSAYYRGA+GA++VYD+T+R SFD++A+W+EELR HAD +I ++LIGNK
Sbjct: 71 TAGQERYRAVTSAYYRGAVGAMLVYDVTRRPSFDNMAKWLEELRGHADKNIVVMLIGNKC 130
Query: 144 DLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNG 203
DL +RAV EDA EFA+ + LFF E SAL NV+TAF +L EIY VSKK L +
Sbjct: 131 DLGTLRAVPTEDAEEFAQRENLFFMETSALESTNVETAFLTILTEIYRLVSKKTLTAND- 189
Query: 204 KVDGPP-----MLAGSKIDVISGADLEISEMK 230
D P +L G+KI ++ D+ E K
Sbjct: 190 --DADPSGISGLLKGTKI-IVPSQDINAGEKK 218
>gi|255636322|gb|ACU18500.1| unknown [Glycine max]
Length = 209
Score = 254 bits (649), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 122/186 (65%), Positives = 150/186 (80%), Gaps = 3/186 (1%)
Query: 24 KIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWD 83
KIDYVFKVV+IGDSAVGK+Q+L+RF KN+F DSK+TIGVEFQT+T+ I+ K +KAQIWD
Sbjct: 12 KIDYVFKVVLIGDSAVGKTQLLARFAKNQFSVDSKATIGVEFQTKTLIIDNKTVKAQIWD 71
Query: 84 TAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKS 143
TAGQERYRAVTSAYYRGA+GA++VYD+TKRQSFD++A+W+EELR HAD +I ++LIGNK
Sbjct: 72 TAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDNMAKWLEELRGHADKNIVVMLIGNKC 131
Query: 144 DLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNG 203
DL +RAV EDA EFA+ + LFF E SAL NV+TAF +L EIY +SKK L +
Sbjct: 132 DLGTLRAVPTEDAEEFAQRENLFFMETSALESTNVETAFLTILTEIYRLISKKTLTAND- 190
Query: 204 KVDGPP 209
D P
Sbjct: 191 --DADP 194
>gi|307102647|gb|EFN50917.1| hypothetical protein CHLNCDRAFT_33302 [Chlorella variabilis]
Length = 217
Score = 254 bits (648), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 129/219 (58%), Positives = 161/219 (73%), Gaps = 9/219 (4%)
Query: 20 MIP---DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKI 76
M+P D DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK
Sbjct: 1 MVPKPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIQVDGKT 60
Query: 77 IKAQIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRI 136
IKAQIWDTAGQERYRA+TSAYYRGA+GA++VYDITK+ +F++V RW++ELR HAD++I I
Sbjct: 61 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKQTTFENVERWLKELRDHADANIVI 120
Query: 137 ILIGNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKK 196
+L+GNKSDL +R+V EDA F E +GL F E SAL NV+ AF R+L EIY VSKK
Sbjct: 121 MLVGNKSDLRHLRSVQTEDAKAFCEREGLSFIETSALEATNVEQAFQRILTEIYHIVSKK 180
Query: 197 ELECGNGKVDGPPMLAGSKIDVISGADLEISEMKKLSTC 235
L +G P +G+ I V A E KK STC
Sbjct: 181 ALASEDGPAAAP--TSGTAIKVTEAA----PEAKKKSTC 213
>gi|12322015|gb|AAG51053.1|AC069473_15 ras-related GTP-binding protein, putative; 1694-2636 [Arabidopsis
thaliana]
Length = 220
Score = 254 bits (648), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 126/198 (63%), Positives = 156/198 (78%), Gaps = 3/198 (1%)
Query: 24 KIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWD 83
KIDYVFKVV+IGDSAVGK+Q+L+RF +NEF DSK+TIGVEFQT+T+ I+ K +KAQIWD
Sbjct: 11 KIDYVFKVVLIGDSAVGKTQLLARFARNEFSVDSKATIGVEFQTKTLVIDNKTVKAQIWD 70
Query: 84 TAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKS 143
TAGQER AVTSAYYRGA+GA++VYD+TKRQSFDH+A+W+EELR HAD +I I+LIGNK
Sbjct: 71 TAGQER--AVTSAYYRGAVGAMLVYDMTKRQSFDHMAKWLEELRGHADKNIVIMLIGNKC 128
Query: 144 DLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNG 203
DL +RAV EDA EFA+ + LFF E SAL NV+TAF +L EIY +SKK L +
Sbjct: 129 DLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTILTEIYRIISKKSLTADDD 188
Query: 204 KVDG-PPMLAGSKIDVIS 220
DG +L G++I + S
Sbjct: 189 DADGNSSLLKGTRIIIPS 206
>gi|226507848|ref|NP_001151959.1| ras-related protein Rab11A [Zea mays]
gi|195651361|gb|ACG45148.1| ras-related protein Rab11A [Zea mays]
gi|223945145|gb|ACN26656.1| unknown [Zea mays]
gi|414886383|tpg|DAA62397.1| TPA: Ras protein Rab11A [Zea mays]
Length = 248
Score = 253 bits (645), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 137/227 (60%), Positives = 172/227 (75%), Gaps = 18/227 (7%)
Query: 24 KIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWD 83
+IDYVFKVVV+GD+AVGK+Q+L+RF ++EF DSK TIGVEFQTRT+T++ K +K QIWD
Sbjct: 26 EIDYVFKVVVVGDAAVGKTQLLARFARDEFALDSKPTIGVEFQTRTLTLHRKRVKTQIWD 85
Query: 84 TAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKS 143
TAGQERYRAVTSAYYRGALGA+VVYD+T+R +F+HVARWVEELRAHAD S + LIGNK+
Sbjct: 86 TAGQERYRAVTSAYYRGALGAMVVYDVTRRATFEHVARWVEELRAHADGSTVVALIGNKA 145
Query: 144 DL-VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELEC-- 200
D+ R V A++A AEDQGLFFSEASAL GDNV+ AF LL+E++ AVS++ LE
Sbjct: 146 DMPAARREVPADEAARLAEDQGLFFSEASALTGDNVERAFLTLLEEVFAAVSRRALELDE 205
Query: 201 ----------GNGKVDGPPMLAGSKIDVISGADLEISEMKKLSTCSC 237
G G+V L G+ +DV G+ +E S MK+ S C+C
Sbjct: 206 ARRMRGDQGDGGGEV---LSLKGTAVDV--GSIMETSAMKRSSQCAC 247
>gi|115439941|ref|NP_001044250.1| Os01g0750000 [Oryza sativa Japonica Group]
gi|14209558|dbj|BAB56054.1| GTP-binding protein GTP1 [Oryza sativa Japonica Group]
gi|32966065|gb|AAP92129.1| GTP-binding protein GTP1 [Oryza sativa]
gi|113533781|dbj|BAF06164.1| Os01g0750000 [Oryza sativa Japonica Group]
gi|125527712|gb|EAY75826.1| hypothetical protein OsI_03740 [Oryza sativa Indica Group]
gi|125572029|gb|EAZ13544.1| hypothetical protein OsJ_03460 [Oryza sativa Japonica Group]
gi|215765620|dbj|BAG87317.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 221
Score = 252 bits (643), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 121/214 (56%), Positives = 162/214 (75%), Gaps = 6/214 (2%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D DY+FK V+IGDS VGKS +LSRFTKNEF +SKSTIGVEF TR++ ++GK++KAQIW
Sbjct: 13 DDYDYLFKTVLIGDSGVGKSNLLSRFTKNEFCLESKSTIGVEFATRSIQVDGKVVKAQIW 72
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYD+T+R +FD+VARW++ELR H D SI ++L+GNK
Sbjct: 73 DTAGQERYRAITSAYYRGAVGALLVYDVTRRATFDNVARWLKELRDHTDPSIVVMLVGNK 132
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
SDL + AVS ED E+AE + L+F E SAL+ NV+ AF +L +IY VSKK +E +
Sbjct: 133 SDLRHLVAVSTEDGKEYAEAESLYFMETSALDATNVENAFAEVLTQIYQTVSKKTVEASD 192
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
+ P + G KI+V ++S +K++ CS
Sbjct: 193 DGSNAP--IKGEKINVKD----DVSALKRIGCCS 220
>gi|242091099|ref|XP_002441382.1| hypothetical protein SORBIDRAFT_09g025640 [Sorghum bicolor]
gi|241946667|gb|EES19812.1| hypothetical protein SORBIDRAFT_09g025640 [Sorghum bicolor]
Length = 220
Score = 251 bits (641), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 125/214 (58%), Positives = 160/214 (74%), Gaps = 6/214 (2%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D DY+FKVV+IGDS VGKS +LSRFTKNEF +SKSTIGVEF TR++ ++GK+IKAQIW
Sbjct: 12 DDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLQVDGKVIKAQIW 71
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYD+T+R +FD+V RW+ ELR H D SI ++LIGNK
Sbjct: 72 DTAGQERYRAITSAYYRGAVGALLVYDVTRRATFDNVGRWLRELRDHTDQSIVVMLIGNK 131
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
SDL + AVS +DA E+AE + ++F E SAL+ NVD AF +L +IY VSKK +E
Sbjct: 132 SDLRHLVAVSTDDAKEYAEAESMYFMETSALDATNVDNAFSEVLTQIYQIVSKKTVEALE 191
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
GP G KI+V ++S MK++ CS
Sbjct: 192 EGAAGPG--KGEKINVKD----DVSAMKRVGCCS 219
>gi|413946075|gb|AFW78724.1| ras protein RIC2 [Zea mays]
Length = 220
Score = 250 bits (639), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 123/214 (57%), Positives = 160/214 (74%), Gaps = 6/214 (2%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D DY+FKVV+IGDS VGKS +LSRFTKNEF +SKSTIGVEF TR++ ++GK+IKAQIW
Sbjct: 12 DDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLQVDGKVIKAQIW 71
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYD+T+R +FD+V RW+ ELR H D SI ++L+GNK
Sbjct: 72 DTAGQERYRAITSAYYRGAVGALLVYDVTRRATFDNVGRWLRELRDHTDQSIVVMLVGNK 131
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
SDL + AVS +DA EFAE + ++F E SAL+ NVD++F +L +IY VSKK +E
Sbjct: 132 SDLRHLVAVSTDDAKEFAEAESMYFMETSALDATNVDSSFSEVLTQIYQIVSKKTVEASE 191
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
P G KI+V ++S MK++ CS
Sbjct: 192 EGAAAPG--KGEKINVKD----DVSAMKRVGCCS 219
>gi|115464897|ref|NP_001056048.1| Os05g0516800 [Oryza sativa Japonica Group]
gi|46575955|gb|AAT01316.1| putative GTP-binding protein RIC2 [Oryza sativa Japonica Group]
gi|113579599|dbj|BAF17962.1| Os05g0516800 [Oryza sativa Japonica Group]
gi|215692843|dbj|BAG88185.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222632234|gb|EEE64366.1| hypothetical protein OsJ_19207 [Oryza sativa Japonica Group]
Length = 220
Score = 250 bits (638), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 125/214 (58%), Positives = 158/214 (73%), Gaps = 6/214 (2%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D DY+FKVV+IGDS VGKS +LSRFTKNEF +SKSTIGVEF TR++ ++GK+IKAQIW
Sbjct: 12 DDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLQVDGKVIKAQIW 71
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYD+T+R +FD+V RW+ ELR H D SI +LIGNK
Sbjct: 72 DTAGQERYRAITSAYYRGAVGALLVYDVTRRATFDNVGRWLRELRDHTDPSIVCMLIGNK 131
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
SDL + AVS ED EFAE + ++F E SAL+ NVD AF +L +IY V+KK +E
Sbjct: 132 SDLRHLVAVSTEDGKEFAEAESMYFMETSALDATNVDNAFAEVLTQIYQIVNKKPVEAPE 191
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
GP G KI+V ++S MK++ CS
Sbjct: 192 DGSAGPG--KGEKINVKD----DVSAMKRVGCCS 219
>gi|125552993|gb|EAY98702.1| hypothetical protein OsI_20633 [Oryza sativa Indica Group]
Length = 220
Score = 250 bits (638), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 125/214 (58%), Positives = 158/214 (73%), Gaps = 6/214 (2%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D DY+FKVV+IGDS VGKS +LSRFTKNEF +SKSTIGVEF TR++ ++GK+IKAQIW
Sbjct: 12 DDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLQVDGKVIKAQIW 71
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYD+T+R +FD+V RW+ ELR H D SI +LIGNK
Sbjct: 72 DTAGQERYRAITSAYYRGAVGALLVYDVTRRATFDNVGRWLRELRDHTDPSIVCMLIGNK 131
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
SDL + AVS ED EFAE + ++F E SAL+ NVD AF +L +IY V+KK +E
Sbjct: 132 SDLRHLVAVSTEDGKEFAEAESMYFMETSALDATNVDNAFAEVLTQIYQIVNKKPVEAPE 191
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
GP G KI+V ++S MK++ CS
Sbjct: 192 DGSAGPG--KGEKINVKD----DVSAMKRVGCCS 219
>gi|224079047|ref|XP_002305729.1| predicted protein [Populus trichocarpa]
gi|222848693|gb|EEE86240.1| predicted protein [Populus trichocarpa]
Length = 218
Score = 249 bits (636), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 121/214 (56%), Positives = 156/214 (72%), Gaps = 4/214 (1%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++ K+IKAQIW
Sbjct: 8 DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDSKVIKAQIW 67
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYD+T+ +F++V RW+ ELR H D +I ++LIGNK
Sbjct: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLIGNK 127
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
SDL + AVS ED FAE + L+F E SAL NVD AF +L +IY VSKK +E G+
Sbjct: 128 SDLRHLVAVSTEDGKSFAERESLYFMETSALEATNVDNAFAEVLNQIYSIVSKKAMETGD 187
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
G KIDV + ++S MK++ CS
Sbjct: 188 NAAASAVPSKGEKIDV----NKDVSAMKRVGCCS 217
>gi|224116798|ref|XP_002317396.1| predicted protein [Populus trichocarpa]
gi|222860461|gb|EEE98008.1| predicted protein [Populus trichocarpa]
Length = 218
Score = 249 bits (636), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 122/214 (57%), Positives = 157/214 (73%), Gaps = 4/214 (1%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK+IKAQIW
Sbjct: 8 DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIW 67
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYD+T+ +F++V RW+ ELR H D +I ++LIGNK
Sbjct: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLIGNK 127
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
SDL + AVS ED FAE + L+F E SAL NVD+AF +L +IY VSKK +E G+
Sbjct: 128 SDLRHLVAVSTEDGKSFAERESLYFMETSALEATNVDSAFAEVLTQIYRIVSKKAMETGD 187
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
G KIDV ++S MK++ CS
Sbjct: 188 EAAASAVPSKGEKIDV----SKDVSAMKRVGCCS 217
>gi|225443742|ref|XP_002268815.1| PREDICTED: ras-related protein RABA1d [Vitis vinifera]
Length = 218
Score = 249 bits (635), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 124/214 (57%), Positives = 157/214 (73%), Gaps = 4/214 (1%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK+IKAQIW
Sbjct: 8 DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIW 67
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYD+T+ +F++V RW+ ELR H D +I ++LIGNK
Sbjct: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLIGNK 127
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
SDL + AVS ED FAE + L+F E SAL NVD AF +L +IY VSKK +E G+
Sbjct: 128 SDLRHLVAVSTEDGKSFAERESLYFMETSALEATNVDNAFAEVLTQIYRIVSKKAMEAGD 187
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
G KIDV G D +S MK++ CS
Sbjct: 188 DGAASAVPSKGEKIDV--GKD--VSAMKRVGCCS 217
>gi|226492842|ref|NP_001148331.1| LOC100281941 [Zea mays]
gi|195617868|gb|ACG30764.1| ras-related protein RIC2 [Zea mays]
Length = 220
Score = 248 bits (634), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 123/214 (57%), Positives = 160/214 (74%), Gaps = 6/214 (2%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D DY+FKVV+IGDS VGKS +LSRFTKNEF +SKSTIGVEF TR++ ++GK+IKAQIW
Sbjct: 12 DDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLQVDGKVIKAQIW 71
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYD+T+R +FD+V RW+ ELR H D SI ++L+GNK
Sbjct: 72 DTAGQERYRAITSAYYRGAVGALLVYDVTRRTTFDNVGRWLRELRDHTDQSIVVMLVGNK 131
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
SDL + AVS +DA EFAE + ++F E SAL+ NVD++F +L +IY VSKK +E
Sbjct: 132 SDLRHLVAVSTDDAKEFAEAESMYFMETSALDATNVDSSFSEVLTQIYQIVSKKTVEVPE 191
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
P G KI+V ++S MK++ CS
Sbjct: 192 EGAVAPG--KGEKINVKD----DVSAMKRVGCCS 219
>gi|346464621|gb|AEO32155.1| hypothetical protein [Amblyomma maculatum]
Length = 184
Score = 248 bits (634), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 119/166 (71%), Positives = 140/166 (84%)
Query: 24 KIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWD 83
KIDYVFKVV+IGDSAVGKSQ+L+RF +NEF DSK+TIGVEFQTRT+ I+ + +KAQIWD
Sbjct: 11 KIDYVFKVVLIGDSAVGKSQLLARFARNEFSLDSKATIGVEFQTRTLAIDKRTVKAQIWD 70
Query: 84 TAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKS 143
TAGQERYRAVTSAYYRGA+GA++VYD+TKRQSFDHVARW+ ELR HAD +I I+LIGNKS
Sbjct: 71 TAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHVARWLNELRGHADKNIVIMLIGNKS 130
Query: 144 DLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEI 189
DL +RAV EDA EFAE + LFF E S L NV++AF +L EI
Sbjct: 131 DLGTLRAVPTEDAKEFAERENLFFMETSVLESXNVESAFQTVLTEI 176
>gi|299109315|emb|CBH32505.1| ras-related protein, expressed [Triticum aestivum]
Length = 221
Score = 248 bits (634), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 120/214 (56%), Positives = 159/214 (74%), Gaps = 6/214 (2%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D DY+FK V+IGDS VGKS +LSRFTKNEF +SKSTIGVEF TR++ ++GK++KAQIW
Sbjct: 13 DDYDYLFKAVIIGDSGVGKSNLLSRFTKNEFCLESKSTIGVEFATRSLQVDGKVVKAQIW 72
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYD+T+R +FD+VARW++ELR H DSSI ++L+GNK
Sbjct: 73 DTAGQERYRAITSAYYRGAVGALLVYDVTRRATFDNVARWLKELRDHTDSSIVVMLVGNK 132
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
SDL + AVS ED E+AE + L+F E SAL+ NVD AF +L +IY S+K ++ G+
Sbjct: 133 SDLRHLVAVSTEDGQEYAEAESLYFMETSALDATNVDNAFSEVLTQIYRIASRKTVDAGD 192
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
P G I+V ++S +K+ CS
Sbjct: 193 DGSSAPSK--GENINVKD----DVSSLKRAGCCS 220
>gi|449433734|ref|XP_004134652.1| PREDICTED: ras-related protein RABA1c-like [Cucumis sativus]
gi|449479217|ref|XP_004155538.1| PREDICTED: ras-related protein RABA1c-like [Cucumis sativus]
gi|307136190|gb|ADN34029.1| GTP-binding protein [Cucumis melo subsp. melo]
Length = 218
Score = 248 bits (633), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 120/214 (56%), Positives = 158/214 (73%), Gaps = 4/214 (1%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D DY+FKVV+IGDS VGKS +LSRFTKNEF +SKSTIGVEF TR++ ++GK+IKAQIW
Sbjct: 8 DDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGKVIKAQIW 67
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYD+T+ ++++V +W++ELR H D +I ++L+GNK
Sbjct: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHSTYENVEKWLKELRDHTDPNIVVMLVGNK 127
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
SDL + AVS EDA FAE + L+F E SAL NVD AF +L +IY VSKK +E +
Sbjct: 128 SDLRHLVAVSTEDAKSFAETESLYFMETSALEATNVDNAFAEVLTQIYHIVSKKAMETND 187
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
+ G KID+ ++SE+KK CS
Sbjct: 188 DAAASAVIAKGEKIDISK----DVSEVKKGGCCS 217
>gi|357136444|ref|XP_003569814.1| PREDICTED: ras-related protein RIC2-like isoform 1 [Brachypodium
distachyon]
gi|357136446|ref|XP_003569815.1| PREDICTED: ras-related protein RIC2-like isoform 2 [Brachypodium
distachyon]
gi|357136448|ref|XP_003569816.1| PREDICTED: ras-related protein RIC2-like isoform 3 [Brachypodium
distachyon]
Length = 222
Score = 248 bits (633), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 120/214 (56%), Positives = 159/214 (74%), Gaps = 6/214 (2%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D DY+FK V+IGDS VGKS +LSRFTKNEF +SKSTIGVEF TR++ ++GK++KAQIW
Sbjct: 14 DDYDYLFKAVIIGDSGVGKSNLLSRFTKNEFCLESKSTIGVEFATRSLQVDGKVVKAQIW 73
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYD+T+R +FD+VARW++ELR H D SI ++L+GNK
Sbjct: 74 DTAGQERYRAITSAYYRGAVGALLVYDVTRRSTFDNVARWLKELRDHTDPSIVVMLVGNK 133
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
SDL + AVS ED E+AE + L+F E SAL+ NVD AF +L +IY S+K ++ G
Sbjct: 134 SDLRHLVAVSTEDGQEYAEAESLYFMETSALDATNVDNAFAEVLTQIYQIASRKTVDAGE 193
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
P G KI+V ++S +K++ CS
Sbjct: 194 DGSAAPSK--GEKINVKD----DVSALKRVGCCS 221
>gi|224120066|ref|XP_002331128.1| predicted protein [Populus trichocarpa]
gi|222872856|gb|EEF09987.1| predicted protein [Populus trichocarpa]
Length = 218
Score = 248 bits (633), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 126/216 (58%), Positives = 159/216 (73%), Gaps = 6/216 (2%)
Query: 22 PDK-IDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQ 80
PD+ DY+FKVV+IGDS VGKS ILSRFT+NEF +SKSTIGVEF TRT+ + G+ +KAQ
Sbjct: 5 PDEEYDYLFKVVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQ 64
Query: 81 IWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIG 140
IWDTAGQERYRA+TSAYYRGALGA++VYD+TK +F++V+RW++ELR HADS+I I+LIG
Sbjct: 65 IWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMLIG 124
Query: 141 NKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELEC 200
NK+DL +RAV+ EDA +AE +GL F E SAL NVD AF +L EIY +SKK L
Sbjct: 125 NKTDLKHLRAVATEDAQSYAEKEGLAFVETSALEATNVDKAFQTILSEIYRIISKKTL-- 182
Query: 201 GNGKVDGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
+ + P + K V+ G D KK + CS
Sbjct: 183 SSEESAAPVSVKDGKTIVVGGPD---PSTKKTTCCS 215
>gi|255562484|ref|XP_002522248.1| protein with unknown function [Ricinus communis]
gi|223538501|gb|EEF40106.1| protein with unknown function [Ricinus communis]
Length = 218
Score = 248 bits (633), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 124/215 (57%), Positives = 158/215 (73%), Gaps = 6/215 (2%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK+IKAQIW
Sbjct: 8 DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIW 67
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYD+T+ +F++V RW+ ELR H D +I ++LIGNK
Sbjct: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLIGNK 127
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
SDL + AVS ED FAE + L+F E SAL NVD AF +L +IY VSKK +E G+
Sbjct: 128 SDLRHLVAVSTEDGKSFAERESLYFMETSALEATNVDNAFAEVLTQIYRIVSKKAMETGD 187
Query: 203 -GKVDGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
G P G KIDV ++S MK++ CS
Sbjct: 188 EGAASAVPS-KGEKIDV----SKDVSAMKRVGCCS 217
>gi|449459304|ref|XP_004147386.1| PREDICTED: ras-related protein RABA1c-like [Cucumis sativus]
gi|449500802|ref|XP_004161198.1| PREDICTED: ras-related protein RABA1c-like [Cucumis sativus]
Length = 218
Score = 248 bits (632), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 120/214 (56%), Positives = 156/214 (72%), Gaps = 4/214 (1%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D DY+FKVV+IGDS VGKS +LSRFTKNEF +SKSTIGVEF TR++ ++GK++KAQIW
Sbjct: 8 DDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDGKVVKAQIW 67
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYD+T+ +F++V RW+ ELR H D +I ++L+GNK
Sbjct: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLVGNK 127
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
SDL + AVS ED FAE + L+F E SAL NV+ +F +L +IY VSKK +E G+
Sbjct: 128 SDLRHLVAVSTEDGKSFAEKESLYFMETSALEATNVENSFAEVLTQIYHIVSKKAMEAGD 187
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
G G KIDV ++S +KK CS
Sbjct: 188 GTAAASVPPKGEKIDV----SKDVSAVKKAGCCS 217
>gi|116787388|gb|ABK24490.1| unknown [Picea sitchensis]
gi|116789079|gb|ABK25109.1| unknown [Picea sitchensis]
Length = 216
Score = 248 bits (632), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 121/216 (56%), Positives = 160/216 (74%), Gaps = 6/216 (2%)
Query: 21 IPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQ 80
+ D DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK+IKAQ
Sbjct: 5 VDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSINVDGKMIKAQ 64
Query: 81 IWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIG 140
IWDTAGQERYRA+TSAYYRGA+GA++VYDIT+ +F++V RW++ELR H + +I ++L+G
Sbjct: 65 IWDTAGQERYRAITSAYYRGAVGALLVYDITRHVTFENVERWLKELRDHTEHNIVVMLVG 124
Query: 141 NKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELEC 200
NKSDL +RAVS EDA FAE +GL+F E SAL NV+ AF ++L +IY VSKK L+
Sbjct: 125 NKSDLRHLRAVSTEDAQTFAEREGLYFIETSALESTNVENAFKQVLTQIYRIVSKKALDV 184
Query: 201 GNGKVDGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
PP G I+V +++ KK+ CS
Sbjct: 185 SEDNAAAPPQ--GQTINVKD----DVTATKKVGCCS 214
>gi|242086541|ref|XP_002439103.1| hypothetical protein SORBIDRAFT_09g000540 [Sorghum bicolor]
gi|241944388|gb|EES17533.1| hypothetical protein SORBIDRAFT_09g000540 [Sorghum bicolor]
Length = 220
Score = 247 bits (630), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 125/217 (57%), Positives = 164/217 (75%), Gaps = 8/217 (3%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
++ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TRT+ + GKIIKAQIW
Sbjct: 8 EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLHVEGKIIKAQIW 67
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGALGAV+VYD++K +F++++RW++ELR HADS+IRI+L+GNK
Sbjct: 68 DTAGQERYRAITSAYYRGALGAVLVYDVSKPTTFENISRWLKELRDHADSNIRIMLVGNK 127
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL---E 199
+DL +RAV+ +DA FAE +GL + E SAL NV+ AF +L +IY A+SKK + E
Sbjct: 128 TDLRHLRAVATDDAQSFAEAEGLSYIETSALEATNVEEAFQLILGDIYRAISKKPVASDE 187
Query: 200 CGNGKVDGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
G G G + G I+V +G D + +K CS
Sbjct: 188 SGQGAAGG--VKEGKTINVATGGD---AAAEKKQCCS 219
>gi|413934936|gb|AFW69487.1| hypothetical protein ZEAMMB73_585575 [Zea mays]
Length = 224
Score = 247 bits (630), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 134/222 (60%), Positives = 165/222 (74%), Gaps = 12/222 (5%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
DYVFK+VV+GDSAVGK+Q+L RFT++EFF DSKSTIG+EFQTRTV I +KAQIWDTA
Sbjct: 4 DYVFKIVVVGDSAVGKTQLLGRFTRDEFFLDSKSTIGIEFQTRTVDIARHRVKAQIWDTA 63
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQERYRAVTSAYYRGALGA++VYD+T R++FDH RWV ELRAHAD SI ++L+GNK+DL
Sbjct: 64 GQERYRAVTSAYYRGALGAMLVYDVTSRRTFDHATRWVAELRAHADKSIVVMLVGNKADL 123
Query: 146 ---VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECG- 201
RAV A++A FAE+QGLFFSEASAL+GDNV+ AF LL+EI+ VS+K L+
Sbjct: 124 ARDAGRRAVDADEAAAFAEEQGLFFSEASALSGDNVERAFLTLLREIHAIVSRKTLDAAA 183
Query: 202 -NGKVDGPPMLAGSKIDVISGADLEISEMKKLST-----CSC 237
G L G+K+ + ++ I E L T CSC
Sbjct: 184 ETGGTTDVLALKGTKLSLAD--EISIMETSALRTASGGSCSC 223
>gi|326488455|dbj|BAJ93896.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 225
Score = 247 bits (630), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 136/222 (61%), Positives = 160/222 (72%), Gaps = 16/222 (7%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
DYVFKVVVIGDS VGK+Q+L RFT+ +F DSKSTIG+EFQTRTV I + +KAQIWDTA
Sbjct: 5 DYVFKVVVIGDSGVGKTQLLGRFTRGDFCLDSKSTIGIEFQTRTVDIARRRVKAQIWDTA 64
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQERYRAVTSAYYRGALGA++VYD+T+R SF H ARWV ELRAHAD SI + L+GNK+DL
Sbjct: 65 GQERYRAVTSAYYRGALGAMLVYDVTRRDSFGHAARWVAELRAHADKSIVVALVGNKADL 124
Query: 146 VDM----RAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECG 201
R V A++A FAE+QGLFF EASAL+GDNV+ AF LL+EI+ AVS+K LE
Sbjct: 125 ATAAPARREVRADEAEAFAEEQGLFFYEASALSGDNVEAAFLGLLEEIHAAVSRKPLEAA 184
Query: 202 NGKVDGPPMLAGSKIDVISGADL-------EISEMKKLSTCS 236
G DG + V+ G L E S MK S CS
Sbjct: 185 RGNGDGD-----DDVLVLKGISLSQELSMMETSAMKTPSRCS 221
>gi|326494958|dbj|BAJ85574.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 221
Score = 246 bits (629), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 119/214 (55%), Positives = 158/214 (73%), Gaps = 6/214 (2%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D DY+FK V+IGDS VGKS +LSRFTKNEF +SKSTIGVEF TR++ ++GK++KAQIW
Sbjct: 13 DDYDYLFKAVIIGDSGVGKSNLLSRFTKNEFCLESKSTIGVEFATRSLQVDGKVVKAQIW 72
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYD+T+R +FD+VARW++ELR H D SI ++L+GNK
Sbjct: 73 DTAGQERYRAITSAYYRGAVGALLVYDVTRRATFDNVARWLKELRDHTDPSIVVMLVGNK 132
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
SDL + AVS ED E+AE + L+F E SAL+ NVD AF +L +IY S+K ++ G+
Sbjct: 133 SDLRHLVAVSTEDGQEYAEAESLYFMETSALDATNVDNAFSEVLTQIYRIASRKTVDAGD 192
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
P G I+V ++S +K+ CS
Sbjct: 193 DGSSAPSK--GENINVKD----DVSSLKRAGCCS 220
>gi|118484551|gb|ABK94149.1| unknown [Populus trichocarpa]
Length = 218
Score = 246 bits (628), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 120/214 (56%), Positives = 155/214 (72%), Gaps = 4/214 (1%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++ K+IKAQIW
Sbjct: 8 DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDSKVIKAQIW 67
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYD+T+ +F++V RW+ ELR H D +I ++LIGNK
Sbjct: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLIGNK 127
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
SDL + AVS ED FAE + L+F E SAL NVD AF +L +IY VSKK +E G+
Sbjct: 128 SDLRHLVAVSTEDGKSFAERESLYFMETSALEATNVDNAFAEVLNQIYSIVSKKAMETGD 187
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
G KIDV + ++S K++ CS
Sbjct: 188 NAAASAVPSKGEKIDV----NKDVSAKKRVGCCS 217
>gi|224109432|ref|XP_002315193.1| predicted protein [Populus trichocarpa]
gi|222864233|gb|EEF01364.1| predicted protein [Populus trichocarpa]
Length = 216
Score = 246 bits (628), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 130/214 (60%), Positives = 158/214 (73%), Gaps = 11/214 (5%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
DY+FK+V+IGDS VGKS ILSRFT+NEF DSKSTIGVEF TRT+ + GK +KAQIWDTA
Sbjct: 10 DYLFKIVLIGDSGVGKSNILSRFTRNEFCLDSKSTIGVEFATRTLQVEGKTVKAQIWDTA 69
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQERYRA+TSAYYRGA+GA++VYDITKRQ+FD+V RW+ ELR HADS+I I+L GNKSDL
Sbjct: 70 GQERYRAITSAYYRGAVGALLVYDITKRQTFDNVRRWLRELRDHADSNIVIMLAGNKSDL 129
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL---ECGN 202
+R+VSAEDA AE +GL F E SAL NV+ AF +L +IY +SKK L E N
Sbjct: 130 NHLRSVSAEDAQTLAEKEGLSFLETSALEASNVEKAFQTILLDIYQIISKKALTAQEAAN 189
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
G P G+ I + A+L S + K + CS
Sbjct: 190 ST--GLPQ--GTTITI---ANLS-SNINKRACCS 215
>gi|297800182|ref|XP_002867975.1| hypothetical protein ARALYDRAFT_492979 [Arabidopsis lyrata subsp.
lyrata]
gi|297313811|gb|EFH44234.1| hypothetical protein ARALYDRAFT_492979 [Arabidopsis lyrata subsp.
lyrata]
Length = 214
Score = 246 bits (627), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 121/214 (56%), Positives = 156/214 (72%), Gaps = 8/214 (3%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ +N K+IKAQIW
Sbjct: 8 DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVNEKVIKAQIW 67
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYD+T+ +F++V RW+ ELR H D +I ++L+GNK
Sbjct: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLVGNK 127
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
SDL + AV EDA FAE++ L+F E SAL NV+ AF +L +IY VSKK +E G
Sbjct: 128 SDLRHLVAVQTEDAKSFAENESLYFMETSALESTNVENAFSEVLTQIYHVVSKKAMEAGQ 187
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
+ P G KIDV ++S +KK CS
Sbjct: 188 DSGNVPS--KGEKIDV------DVSAVKKTGCCS 213
>gi|15234020|ref|NP_193615.1| RAB GTPase homolog A1D [Arabidopsis thaliana]
gi|75206859|sp|Q9SN35.1|RAA1D_ARATH RecName: Full=Ras-related protein RABA1d; Short=AtRABA1d; AltName:
Full=Ras-related protein Rab11B; Short=AtRab11B;
AltName: Full=Ras-related protein SGBP; Short=AthSGBP
gi|4539399|emb|CAB37465.1| ras-like GTP-binding protein [Arabidopsis thaliana]
gi|7268674|emb|CAB78882.1| ras-like GTP-binding protein [Arabidopsis thaliana]
gi|28393029|gb|AAO41949.1| putative ras-related GTP binding protein [Arabidopsis thaliana]
gi|28827250|gb|AAO50469.1| putative ras-related GTP binding protein [Arabidopsis thaliana]
gi|110736954|dbj|BAF00433.1| ras-like GTP-binding protein [Arabidopsis thaliana]
gi|332658691|gb|AEE84091.1| RAB GTPase homolog A1D [Arabidopsis thaliana]
Length = 214
Score = 246 bits (627), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 121/214 (56%), Positives = 156/214 (72%), Gaps = 8/214 (3%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ +N K+IKAQIW
Sbjct: 8 DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVNEKVIKAQIW 67
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYD+T+ +F++V RW+ ELR H D +I ++L+GNK
Sbjct: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLVGNK 127
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
SDL + AV EDA FAE++ L+F E SAL NV+ AF +L +IY VSKK +E G
Sbjct: 128 SDLRHLVAVQTEDAKSFAENESLYFMETSALESTNVENAFSEVLTQIYHVVSKKAMEAGE 187
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
+ P G KIDV ++S +KK CS
Sbjct: 188 DSGNVPS--KGEKIDV------DVSAVKKTGCCS 213
>gi|226529503|ref|NP_001151078.1| ras-related protein Rab11C [Zea mays]
gi|226958337|ref|NP_001152941.1| ras-related protein Rab11C [Zea mays]
gi|195629564|gb|ACG36423.1| ras-related protein Rab11C [Zea mays]
gi|195644124|gb|ACG41530.1| ras-related protein Rab11C [Zea mays]
gi|223973589|gb|ACN30982.1| unknown [Zea mays]
Length = 219
Score = 246 bits (627), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 124/206 (60%), Positives = 158/206 (76%), Gaps = 10/206 (4%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
++ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TRT+ + GKIIKAQIW
Sbjct: 8 EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLHVEGKIIKAQIW 67
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGALGAV+VYD++K +F++++RW++ELR HADS+ RI+L+GNK
Sbjct: 68 DTAGQERYRAITSAYYRGALGAVLVYDVSKPTTFENISRWLKELRDHADSNTRIMLVGNK 127
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKK-----E 197
+DL +RAV+ +DA FAE +GL + E SAL NV+ AF +L +IY AVSKK E
Sbjct: 128 TDLRHLRAVATDDARSFAEAEGLSYIETSALEATNVEEAFQLILGDIYRAVSKKPVASDE 187
Query: 198 LECGNGKVDGPPMLAGSKIDVISGAD 223
+ G G V G IDV +GAD
Sbjct: 188 VGAGQGGVK-----EGKTIDVATGAD 208
>gi|413951936|gb|AFW84585.1| ras protein Rab11C [Zea mays]
Length = 345
Score = 245 bits (626), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 122/222 (54%), Positives = 158/222 (71%), Gaps = 5/222 (2%)
Query: 15 QQQENMIPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTING 74
Q+ + + ++ DY+FK+V+IGDS VGKS ILSRFT+NEF +SKSTIGVEF TR + I+G
Sbjct: 128 QKMAHRVNNEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRNLQIDG 187
Query: 75 KIIKAQIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSI 134
K +KAQIWDTAGQERYRA+TSAYYRGA+GA++VYDITK+QSFD V RW+ ELR HAD++I
Sbjct: 188 KTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKKQSFDSVQRWLRELRGHADANI 247
Query: 135 RIILIGNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVS 194
++++GNKSDL +R+V ED F+E +GL F E SAL NV+ AF +L EI+ VS
Sbjct: 248 VVMMVGNKSDLNHLRSVPEEDGRAFSEKEGLSFLETSALEAINVEKAFHTILSEIHQTVS 307
Query: 195 KKELECGNGKVDGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
KK L + G+ I+V E S + K S CS
Sbjct: 308 KKALAAQASASTNGRSMQGTTINVA-----ESSTVTKGSCCS 344
>gi|212723022|ref|NP_001131943.1| Ras protein Rab11A [Zea mays]
gi|194692980|gb|ACF80574.1| unknown [Zea mays]
gi|195641328|gb|ACG40132.1| ras-related protein Rab11A [Zea mays]
gi|414589227|tpg|DAA39798.1| TPA: Ras protein Rab11A [Zea mays]
Length = 223
Score = 245 bits (626), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 119/196 (60%), Positives = 149/196 (76%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGKS +LSRFTKN F DSKSTIGVEF TRT+ + KIIKAQIW
Sbjct: 13 DEYDYLFKVVLIGDSGVGKSNLLSRFTKNTFALDSKSTIGVEFATRTLQVENKIIKAQIW 72
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYD+TK +F++V RW++ELR HADS+I ++LIGNK
Sbjct: 73 DTAGQERYRAITSAYYRGAVGALLVYDVTKVMTFENVKRWLKELRDHADSNIVVMLIGNK 132
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
+DL +R+V+ EDA FAE +GLFF E SAL+ NV+ AF +L EIY +SKK L
Sbjct: 133 TDLRHLRSVAVEDAASFAESEGLFFIETSALDATNVEKAFHTVLAEIYRIISKKPLSSEE 192
Query: 203 GKVDGPPMLAGSKIDV 218
+ + G I V
Sbjct: 193 SGLGSGNLREGQSIQV 208
>gi|168041027|ref|XP_001772994.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162675727|gb|EDQ62219.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 216
Score = 245 bits (625), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 123/213 (57%), Positives = 157/213 (73%), Gaps = 5/213 (2%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIW
Sbjct: 7 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIQVDGKTIKAQIW 66
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDITK ++++V RW++ELR HADS+I I+L+GNK
Sbjct: 67 DTAGQERYRAITSAYYRGAVGALLVYDITKHVTYENVERWLKELRDHADSNIVIMLVGNK 126
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
SDL +R VS +DA FAE +GL F E SAL NV+ AF R+L EIY VSKK L
Sbjct: 127 SDLRHLRGVSLDDAQSFAEKEGLSFIETSALESTNVEKAFQRILTEIYRIVSKKALASEE 186
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLSTC 235
+GP G +++ D ++KK C
Sbjct: 187 NATEGP----GQGTNIVP-LDSNSPDLKKKGCC 214
>gi|168006845|ref|XP_001756119.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162692629|gb|EDQ78985.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 216
Score = 245 bits (625), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 122/213 (57%), Positives = 157/213 (73%), Gaps = 5/213 (2%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIW
Sbjct: 7 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIQVDGKTIKAQIW 66
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDITK ++++V RW++ELR HADS+I I+L+GNK
Sbjct: 67 DTAGQERYRAITSAYYRGAVGALLVYDITKHVTYENVERWLKELRDHADSNIVIMLVGNK 126
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
SDL +R VS +DA F+E +GL F E SAL NV+ AF R+L EIY VSKK L
Sbjct: 127 SDLKHLRGVSTDDAQSFSEKEGLSFIETSALESTNVEKAFQRILTEIYRIVSKKALASEE 186
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLSTC 235
+GP G +++ D ++KK C
Sbjct: 187 NTTEGP----GQGTNIVP-LDSNAPDLKKKGCC 214
>gi|357446819|ref|XP_003593685.1| GTP-binding protein ras-like protein [Medicago truncatula]
gi|355482733|gb|AES63936.1| GTP-binding protein ras-like protein [Medicago truncatula]
Length = 217
Score = 245 bits (625), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 121/215 (56%), Positives = 160/215 (74%), Gaps = 5/215 (2%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D DY+FKVV+IGDS VGKS +LSRFTKNEF +SKSTIGVEF TR++ ++ K++KAQIW
Sbjct: 8 DDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIW 67
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYD+T+ +F++V RW++ELR H D++I ++L+GNK
Sbjct: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVVMLVGNK 127
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
+DL +RAVS ED+ FAE + FF E SAL NV+ AF +L +IY VSKK LE G+
Sbjct: 128 ADLRHLRAVSTEDSTAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSKKALEIGD 187
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLSTCSC 237
D + G IDV G+ ++S +KK CS
Sbjct: 188 ---DPTALPKGQTIDV--GSRDDVSAVKKSGCCSA 217
>gi|3024528|sp|Q39434.1|RB2BV_BETVU RecName: Full=Ras-related protein Rab2BV
gi|974778|emb|CAA89049.1| small G protein [Beta vulgaris subsp. vulgaris]
Length = 214
Score = 244 bits (624), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 124/218 (56%), Positives = 156/218 (71%), Gaps = 7/218 (3%)
Query: 19 NMIPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIK 78
N + + DY+FK+V+IGDS VGKS ILSRFT+NEF +SKSTIGVEF TRT+ + GK +K
Sbjct: 3 NRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVK 62
Query: 79 AQIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIIL 138
AQIWDTAGQERYRA+TSAYYRGA+GA++VYDITKRQ+FD+V RW+ ELR HADS+I I++
Sbjct: 63 AQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMM 122
Query: 139 IGNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL 198
GNKSDL +RAVS ED AE +GL F E SAL N++ AF +L EIY +SKK L
Sbjct: 123 AGNKSDLKHLRAVSEEDGQALAEKEGLSFLETSALEAVNIEKAFQTILTEIYHIISKKAL 182
Query: 199 ECGNGKVDGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
+ P G+ I+V + S ++ S CS
Sbjct: 183 AAQEASSNLPGQ--GTTINVA-----DASANQRRSCCS 213
>gi|449456603|ref|XP_004146038.1| PREDICTED: ras-related protein RABA1f-like [Cucumis sativus]
gi|449510339|ref|XP_004163637.1| PREDICTED: ras-related protein RABA1f-like [Cucumis sativus]
gi|307135941|gb|ADN33802.1| GTP-binding protein [Cucumis melo subsp. melo]
Length = 217
Score = 244 bits (624), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 122/214 (57%), Positives = 158/214 (73%), Gaps = 5/214 (2%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++ KI+KAQIW
Sbjct: 8 DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKIVKAQIW 67
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYD+T+ +F++V RW++ELR H DS+I I+L+GNK
Sbjct: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNK 127
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
+DL +RAVS EDA FAE + FF E SAL NV+ AF +L +IY V +K LE G
Sbjct: 128 ADLRHLRAVSTEDAQAFAEKENTFFMETSALESLNVENAFTEVLTQIYRVVCRKALEIGE 187
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
D + G I+V G ++S MKK+ CS
Sbjct: 188 ---DPAALPKGQTINV--GNKDDVSAMKKVGCCS 216
>gi|188509942|gb|ACD56628.1| putative GTP-binding protein [Gossypium raimondii]
Length = 218
Score = 244 bits (624), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 122/214 (57%), Positives = 155/214 (72%), Gaps = 4/214 (1%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK+IKAQIW
Sbjct: 8 DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIW 67
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYD+T+ +F++V RW+ ELR H D +I ++L+GNK
Sbjct: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLVGNK 127
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
SDL + AVS ED FAE + L+F E SAL NV+ AF +L +IY VSKK +E +
Sbjct: 128 SDLRHLVAVSTEDGKSFAEKESLYFMETSALEATNVEIAFAEVLTQIYNVVSKKAMETSD 187
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
G KIDV G D +S MKK CS
Sbjct: 188 DGAASAVPSKGEKIDV--GKD--VSAMKKGGCCS 217
>gi|168027772|ref|XP_001766403.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682312|gb|EDQ68731.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 216
Score = 244 bits (624), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 122/213 (57%), Positives = 157/213 (73%), Gaps = 5/213 (2%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIW
Sbjct: 7 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIQVDGKTIKAQIW 66
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDITK ++++V RW++ELR HADS+I I+L+GNK
Sbjct: 67 DTAGQERYRAITSAYYRGAVGALLVYDITKHVTYENVERWLKELRDHADSNIVIMLVGNK 126
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
SDL +R VS +DA F+E +GL F E SAL NV+ AF R+L EIY VSKK L
Sbjct: 127 SDLKHLRGVSTDDAQAFSEKEGLSFIETSALESTNVEKAFQRILTEIYRIVSKKALASEE 186
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLSTC 235
+GP G +++ D ++KK C
Sbjct: 187 NTTEGP----GQGTNIVP-LDSNAPDLKKKGCC 214
>gi|449441350|ref|XP_004138445.1| PREDICTED: ras-related protein Rab2BV-like [Cucumis sativus]
gi|449528641|ref|XP_004171312.1| PREDICTED: ras-related protein Rab2BV-like [Cucumis sativus]
Length = 216
Score = 244 bits (624), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 127/218 (58%), Positives = 157/218 (72%), Gaps = 9/218 (4%)
Query: 21 IPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQ 80
+ + DY+FK+V+IGDS VGKS ILSRFT+NEF +SKSTIGVEF TRT+ + GK +KAQ
Sbjct: 5 VDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQ 64
Query: 81 IWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIG 140
IWDTAGQERYRA+TSAYYRGA+GA++VYDITKRQ+FD+V RW+ ELR HADS+I I++ G
Sbjct: 65 IWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAG 124
Query: 141 NKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELEC 200
NK+DL +RAVSAEDA AE +GL F E SAL NV+ AF +L +IY +SKK L
Sbjct: 125 NKADLNHLRAVSAEDAQVLAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKAL-A 183
Query: 201 GNGKVDGPPMLAGSKIDV--ISGADLEISEMKKLSTCS 236
P + G+ I+V ISG K S CS
Sbjct: 184 AQEATSNPGLPHGTTINVANISG------NYNKRSCCS 215
>gi|440638900|gb|ELR08819.1| Ras-like protein Rab-11A [Geomyces destructans 20631-21]
Length = 212
Score = 244 bits (624), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 121/204 (59%), Positives = 156/204 (76%), Gaps = 2/204 (0%)
Query: 20 MIPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKA 79
M D+ D++FKVV+IGDS VGKS +LSRFT+NEF DSKSTIGVEF TR++ ++ K IKA
Sbjct: 1 MANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDAKTIKA 60
Query: 80 QIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILI 139
QIWDTAGQERYRA+TSAYYRGA+GA++VYDI+K Q++++V RW++ELR HADS+I I+L+
Sbjct: 61 QIWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADSNIVIMLV 120
Query: 140 GNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELE 199
GNKSDL +RAV E+A +FA D GL F E SAL+ NV+ AF +L EIY VS K L+
Sbjct: 121 GNKSDLRHLRAVPTEEAKQFASDNGLSFIETSALDASNVELAFQNILTEIYRIVSSKALD 180
Query: 200 CGNGKVDGPPMLAGSKIDVISGAD 223
G+G + AG+ I + AD
Sbjct: 181 SGDGA--QANIGAGTNISLSKPAD 202
>gi|168048483|ref|XP_001776696.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162671988|gb|EDQ58532.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 215
Score = 244 bits (623), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 117/186 (62%), Positives = 147/186 (79%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIW
Sbjct: 7 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIQVDGKTIKAQIW 66
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDITK ++++V RW++ELR HADS+I I+L+GNK
Sbjct: 67 DTAGQERYRAITSAYYRGAVGALLVYDITKHVTYENVERWLKELRDHADSNIVIMLVGNK 126
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
SDL +R VS +DA F+E +GL F E SAL NV+ AF R+L EIY VSKK L
Sbjct: 127 SDLKHLRGVSTDDAQAFSEKEGLSFIETSALESTNVEKAFQRILTEIYRIVSKKALASEE 186
Query: 203 GKVDGP 208
+GP
Sbjct: 187 NTTEGP 192
>gi|115441051|ref|NP_001044805.1| Os01g0848700 [Oryza sativa Japonica Group]
gi|15408893|dbj|BAB64284.1| putative Ras-related GTP-binding protein RAB11C [Oryza sativa
Japonica Group]
gi|113534336|dbj|BAF06719.1| Os01g0848700 [Oryza sativa Japonica Group]
gi|125528382|gb|EAY76496.1| hypothetical protein OsI_04436 [Oryza sativa Indica Group]
gi|125572634|gb|EAZ14149.1| hypothetical protein OsJ_04079 [Oryza sativa Japonica Group]
gi|215700996|dbj|BAG92420.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 216
Score = 244 bits (622), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 122/216 (56%), Positives = 155/216 (71%), Gaps = 5/216 (2%)
Query: 21 IPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQ 80
+ ++ DY+FK+V+IGDS VGKS ILSRFT+NEFF +SKSTIGVEF TRT+ I GK IKAQ
Sbjct: 5 VDNEYDYLFKIVLIGDSGVGKSNILSRFTRNEFFLESKSTIGVEFATRTLQIEGKTIKAQ 64
Query: 81 IWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIG 140
IWDTAGQERYRA+TSAYYRGA+GA++V+DITKRQ+FD+V RW+ ELR HAD++I ++++G
Sbjct: 65 IWDTAGQERYRAITSAYYRGAVGALLVFDITKRQTFDNVQRWLRELRDHADANIVVMMVG 124
Query: 141 NKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELEC 200
NKSDL +R+V ED F+E +GL F E SAL NV+ AF +L EI+ VSKK L
Sbjct: 125 NKSDLNHLRSVPEEDGHAFSEKEGLSFLETSALEAINVEKAFHTVLSEIHQIVSKKALAA 184
Query: 201 GNGKVDGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
+ G+ I+V E K S CS
Sbjct: 185 QESASTNGRSMQGTTINVA-----EAPAATKGSCCS 215
>gi|357158024|ref|XP_003577992.1| PREDICTED: ras-related protein RABA1f-like [Brachypodium
distachyon]
Length = 216
Score = 244 bits (622), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 122/214 (57%), Positives = 160/214 (74%), Gaps = 5/214 (2%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++ K++KAQIW
Sbjct: 7 DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKVVKAQIW 66
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA+VVYD+T+ +F++V RW++ELR H D++I I+L+GNK
Sbjct: 67 DTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWLKELRDHTDANIVIMLVGNK 126
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
+DL +RAVS EDA FAE + FF E SAL NV++AF +L +IY VSKK L+ G+
Sbjct: 127 ADLRHLRAVSVEDAKAFAERESTFFMETSALEAMNVESAFTEVLTQIYRVVSKKALDIGD 186
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
PP G I+V G ++S +KK CS
Sbjct: 187 DPA-APPR--GQTINV--GGKDDVSAVKKAGCCS 215
>gi|384247834|gb|EIE21319.1| ras-related protein Rab2BV [Coccomyxa subellipsoidea C-169]
Length = 214
Score = 244 bits (622), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 124/214 (57%), Positives = 159/214 (74%), Gaps = 7/214 (3%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIW
Sbjct: 7 DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIQVDGKTIKAQIW 66
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDITK+ +F++V RW++ELR HADS+I I+L+GNK
Sbjct: 67 DTAGQERYRAITSAYYRGAVGALLVYDITKQVTFENVERWLKELRDHADSNIVIMLVGNK 126
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
SDL +R+V +D+ F E +GL F E SAL NV+ AF R+L EIY VSKK L
Sbjct: 127 SDLRHLRSVQTDDSQAFCEKEGLSFIETSALESTNVEQAFQRILTEIYHIVSKKAL---- 182
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
D P G++I V ++ + E KK + CS
Sbjct: 183 ASEDKPQPDKGTRIVV---SETQPEEKKKSACCS 213
>gi|49333370|gb|AAT64010.1| putative GTP-binding protein [Gossypium hirsutum]
Length = 218
Score = 244 bits (622), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 122/214 (57%), Positives = 155/214 (72%), Gaps = 4/214 (1%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK+IKAQIW
Sbjct: 8 DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIW 67
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYD+T+ +F++V RW+ ELR H D +I ++L+GNK
Sbjct: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLVGNK 127
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
SDL + AVS ED FAE + L+F E SAL NV+ AF +L +IY VSKK +E +
Sbjct: 128 SDLRHLVAVSTEDGKSFAEKESLYFMETSALEATNVEIAFAEVLTQIYNIVSKKAMETSD 187
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
G KIDV G D +S MKK CS
Sbjct: 188 DGAASAVPSKGEKIDV--GKD--VSAMKKGGCCS 217
>gi|302771698|ref|XP_002969267.1| rab family GTPase [Selaginella moellendorffii]
gi|302810305|ref|XP_002986844.1| rab family GTPase [Selaginella moellendorffii]
gi|300145498|gb|EFJ12174.1| rab family GTPase [Selaginella moellendorffii]
gi|300162743|gb|EFJ29355.1| rab family GTPase [Selaginella moellendorffii]
Length = 217
Score = 244 bits (622), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 118/212 (55%), Positives = 159/212 (75%), Gaps = 4/212 (1%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK++KAQIWDTA
Sbjct: 10 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSINVDGKLVKAQIWDTA 69
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQERYRA+TSAYYRGA+GA++VYDIT+ ++++V RW++EL+ H DS+I ++L+GNKSDL
Sbjct: 70 GQERYRAITSAYYRGAVGALLVYDITRPVTYENVERWLKELKDHTDSNIVVMLVGNKSDL 129
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNGKV 205
+RAVS ED F+E +GL+F E SAL NV+ AF ++L +IY VSKK L+ G
Sbjct: 130 RHLRAVSTEDGQAFSEREGLYFMETSALESTNVENAFKQILTQIYRVVSKKALDVGEDPS 189
Query: 206 DGPPMLAGSKIDVISGADLEISEMKKLSTCSC 237
P G I+V G +++ KK+ CS
Sbjct: 190 AAPA--KGQTINV--GGKDDVTATKKVGCCSA 217
>gi|188509957|gb|ACD56641.1| putative GTP-binding protein [Gossypioides kirkii]
Length = 218
Score = 244 bits (622), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 121/214 (56%), Positives = 155/214 (72%), Gaps = 4/214 (1%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK+IKAQIW
Sbjct: 8 DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSLNVDGKVIKAQIW 67
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYD+T+ +F++V RW+ ELR H D +I ++L+GNK
Sbjct: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLVGNK 127
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
SDL + AVS ED FAE + L+F E SAL NV+ AF +L ++Y VSKK +E +
Sbjct: 128 SDLRHLVAVSTEDGKSFAEKESLYFMETSALEATNVEIAFAEVLTQVYNVVSKKAMETSD 187
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
G KIDV G D +S MKK CS
Sbjct: 188 DGAASAVPSKGEKIDV--GKD--VSAMKKGGCCS 217
>gi|357474509|ref|XP_003607539.1| GTP-binding protein ras-like protein [Medicago truncatula]
gi|355508594|gb|AES89736.1| GTP-binding protein ras-like protein [Medicago truncatula]
Length = 217
Score = 244 bits (622), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 121/215 (56%), Positives = 161/215 (74%), Gaps = 5/215 (2%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D DY+FKVV+IGDS VGKS +LSRFTKNEF +SKSTIGVEF TR++ ++ KI+KAQIW
Sbjct: 8 DDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIHVDDKIVKAQIW 67
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYD+T+ +F++V RW++ELR H D++I I+L+GNK
Sbjct: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMLVGNK 127
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
+DL +RAVS +DA FAE + FF E SAL NVD +F +L +IY VS+K LE G+
Sbjct: 128 ADLRHLRAVSTDDAKAFAERENTFFMETSALESLNVDNSFTEVLTQIYRVVSRKTLEIGD 187
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLSTCSC 237
D + G I+V G+ ++S +KK+ CS
Sbjct: 188 ---DPAALPKGQTINV--GSRDDVSAVKKVGCCSA 217
>gi|414885034|tpg|DAA61048.1| TPA: hypothetical protein ZEAMMB73_722788 [Zea mays]
Length = 323
Score = 243 bits (621), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 122/214 (57%), Positives = 160/214 (74%), Gaps = 5/214 (2%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++ K++KAQIW
Sbjct: 114 DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKVVKAQIW 173
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA+VVYD+T+ +F++V RW++ELR H D++I I+L+GNK
Sbjct: 174 DTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWLKELRDHTDANIVIMLVGNK 233
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
+DL +RAVS EDA FAE + FF E SAL NV++AF +L +IY VSKK L+ G+
Sbjct: 234 ADLRHLRAVSVEDAKGFAERESTFFMETSALESMNVESAFTEVLTQIYRVVSKKALDIGD 293
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
PP G I+V G ++S +KK CS
Sbjct: 294 DPA-APPR--GQTINV--GGKDDVSAVKKSGCCS 322
>gi|356543002|ref|XP_003539952.1| PREDICTED: ras-related protein RABA1f-like [Glycine max]
Length = 217
Score = 243 bits (621), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 122/215 (56%), Positives = 160/215 (74%), Gaps = 5/215 (2%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D DY+FKVV+IGDS VGKS +LSRFTKNEF +SKSTIGVEF TR++ ++ KI+KAQIW
Sbjct: 8 DDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIHVDDKIVKAQIW 67
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYD+T+ +F++V RW++ELR H D++I I+L+GNK
Sbjct: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMLVGNK 127
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
+DL +RAVS +DA FAE + FF E SAL NVD AF +L +IY VS+K LE G+
Sbjct: 128 ADLRHLRAVSTDDAKAFAERENTFFMETSALESLNVDNAFTEVLTQIYRVVSRKTLEIGD 187
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLSTCSC 237
D + G I+V G+ ++S +KK CS
Sbjct: 188 ---DPAALPKGQTINV--GSRDDVSAVKKSGCCSA 217
>gi|223947393|gb|ACN27780.1| unknown [Zea mays]
Length = 216
Score = 243 bits (621), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 121/216 (56%), Positives = 155/216 (71%), Gaps = 5/216 (2%)
Query: 21 IPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQ 80
+ ++ DY+FK+V+IGDS VGKS ILSRFT+NEF +SKSTIGVEF TR + I+GK +KAQ
Sbjct: 5 VNNEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRNLQIDGKTVKAQ 64
Query: 81 IWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIG 140
IWDTAGQERYRA+TSAYYRGA+GA++VYDITK+QSFD V RW+ ELR HAD++I ++++G
Sbjct: 65 IWDTAGQERYRAITSAYYRGAVGALLVYDITKKQSFDSVQRWLRELRGHADANIVVMMVG 124
Query: 141 NKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELEC 200
NKSDL +R+V ED F+E +GL F E SAL NV+ AF +L EI+ VSKK L
Sbjct: 125 NKSDLNHLRSVPEEDGRAFSEKEGLSFLETSALEAINVEKAFHTILSEIHQTVSKKALAA 184
Query: 201 GNGKVDGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
+ G+ I+V E S + K S CS
Sbjct: 185 QASASTNGRSMQGTTINVA-----ESSTVTKGSCCS 215
>gi|326497829|dbj|BAJ94777.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326501616|dbj|BAK02597.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 216
Score = 243 bits (621), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 122/214 (57%), Positives = 159/214 (74%), Gaps = 5/214 (2%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++ K++KAQIW
Sbjct: 7 DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKVVKAQIW 66
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA+VVYD+T+ +F++V RW++ELR H D++I I+L+GNK
Sbjct: 67 DTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWLKELRDHTDANIVIMLVGNK 126
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
+DL +RAVS EDA FAE + FF E SAL NV+ AF +L +IY VSKK L+ G+
Sbjct: 127 ADLRHLRAVSVEDAKAFAERESTFFMETSALEAMNVENAFTEVLTQIYRVVSKKALDIGD 186
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
PP G I+V G ++S +KK CS
Sbjct: 187 DPA-APPR--GQTINV--GGKDDVSAVKKAGCCS 215
>gi|449431866|ref|XP_004133721.1| PREDICTED: ras-related protein RABA2a-like [Cucumis sativus]
Length = 216
Score = 243 bits (621), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 115/176 (65%), Positives = 143/176 (81%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TRT+ + G+ +KAQIW
Sbjct: 7 DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQIW 66
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGALGA++VYD+TK +FD+V+RW++ELR HADS+I I+LIGNK
Sbjct: 67 DTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVIMLIGNK 126
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL 198
+DL +RAV+ EDA +AE +GL F E SAL NV+ AF +L EIY +SKK L
Sbjct: 127 TDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKKSL 182
>gi|297850098|ref|XP_002892930.1| hypothetical protein ARALYDRAFT_471894 [Arabidopsis lyrata subsp.
lyrata]
gi|297338772|gb|EFH69189.1| hypothetical protein ARALYDRAFT_471894 [Arabidopsis lyrata subsp.
lyrata]
Length = 216
Score = 243 bits (621), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 121/217 (55%), Positives = 160/217 (73%), Gaps = 8/217 (3%)
Query: 21 IPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQ 80
+ D DY+FKVV+IGDS VGKS +LSRFTKNEF +SKSTIGVEF TRT+ ++GK+IKAQ
Sbjct: 6 VEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDGKVIKAQ 65
Query: 81 IWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIG 140
IWDTAGQERYRA+TSAYYRGA+GA++VYD+T+R +F++V RW++EL+ H D +I ++L+G
Sbjct: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENVDRWLKELKNHTDPNIVVMLVG 125
Query: 141 NKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELEC 200
NKSDL + AV ED +AE + L F E SAL NV+ AF +L +IY SKK++E
Sbjct: 126 NKSDLRHLLAVPTEDGKSYAEQESLCFMETSALEATNVEDAFAEVLTQIYRITSKKQVEA 185
Query: 201 G-NGKVDGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
G +G P G KI+V + ++S +KKL CS
Sbjct: 186 GEDGNASVPK---GEKIEVKN----DVSALKKLGCCS 215
>gi|449478127|ref|XP_004155229.1| PREDICTED: ras-related protein RABA2a-like [Cucumis sativus]
Length = 220
Score = 243 bits (620), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 115/176 (65%), Positives = 143/176 (81%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TRT+ + G+ +KAQIW
Sbjct: 7 DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQIW 66
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGALGA++VYD+TK +FD+V+RW++ELR HADS+I I+LIGNK
Sbjct: 67 DTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVIMLIGNK 126
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL 198
+DL +RAV+ EDA +AE +GL F E SAL NV+ AF +L EIY +SKK L
Sbjct: 127 TDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKKSL 182
>gi|218194009|gb|EEC76436.1| hypothetical protein OsI_14124 [Oryza sativa Indica Group]
Length = 215
Score = 243 bits (620), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 118/202 (58%), Positives = 152/202 (75%), Gaps = 1/202 (0%)
Query: 21 IPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQ 80
+ ++ DY+FK+V+IGDS VGKS ILSRFT+NEF +SKSTIGVEF TRT+ I GK IKAQ
Sbjct: 5 VDNEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQIEGKTIKAQ 64
Query: 81 IWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIG 140
IWDTAGQERYRA+TSAYYRGA+GA++VYDITK+Q+F+++ RW+ ELR HADS+I I+++G
Sbjct: 65 IWDTAGQERYRAITSAYYRGAVGALLVYDITKKQTFENIQRWLRELRDHADSNIVIMMVG 124
Query: 141 NKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELEC 200
NKSDL +R+V ED AE +GL F E SAL NV+ AF +L++I+ +SKK L
Sbjct: 125 NKSDLNHLRSVPEEDGQALAEKEGLSFLETSALEALNVEKAFQTILKDIHQIISKKALAA 184
Query: 201 GNGKVDGPPMLAGSKIDVISGA 222
GPP G+ I+V A
Sbjct: 185 QEAAGSGPPT-QGTTINVTDSA 205
>gi|388497686|gb|AFK36909.1| unknown [Lotus japonicus]
Length = 217
Score = 243 bits (620), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 120/215 (55%), Positives = 158/215 (73%), Gaps = 7/215 (3%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D DY+FKVV+IGDS VGKS +LSRFTKNEF +SKSTIGVEF TRT+ ++ K+IK+QIW
Sbjct: 8 DDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSKVIKSQIW 67
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGALGA++VYD+T+ +F++V RW++ELR H DS+I ++L+GNK
Sbjct: 68 DTAGQERYRAITSAYYRGALGALLVYDVTRHATFENVDRWLKELRNHTDSNIVVMLVGNK 127
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECG- 201
SDL + AVS ED + E + L+F E SAL NV+ AF +L +IY VSKK +E
Sbjct: 128 SDLRHLVAVSTEDGKSYTEKESLYFIETSALEASNVENAFAEVLTQIYNVVSKKAVEGAE 187
Query: 202 NGKVDGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
NG P G KID+ + ++S +K++ CS
Sbjct: 188 NGTASVPA--KGEKIDLKN----DVSALKRVGCCS 216
>gi|49333384|gb|AAT64023.1| putative GTP-binding protein [Gossypium hirsutum]
Length = 218
Score = 243 bits (620), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 120/214 (56%), Positives = 155/214 (72%), Gaps = 4/214 (1%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK+IKAQIW
Sbjct: 8 DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIW 67
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYD+T+ +F++V RW+ ELR H D +I ++L+GNK
Sbjct: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLVGNK 127
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
SDL + AVS ED FAE + L+F E SAL NV+ +F +L +IY +SKK +E +
Sbjct: 128 SDLRHLVAVSTEDGKSFAEKESLYFMETSALEATNVEISFAEVLTQIYNVISKKAMETSD 187
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
G KIDV G D +S MKK CS
Sbjct: 188 DGAASAVPSKGEKIDV--GKD--VSAMKKGGCCS 217
>gi|334261577|gb|AEG74029.1| Rab protein [Pellia endiviifolia (species B)]
Length = 217
Score = 243 bits (620), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 118/215 (54%), Positives = 159/215 (73%), Gaps = 4/215 (1%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++ K+IKAQIW
Sbjct: 7 DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSINVDSKLIKAQIW 66
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDIT+ +F++V RW++EL+ H DS+I ++L+GNK
Sbjct: 67 DTAGQERYRAITSAYYRGAVGALLVYDITRHVTFENVERWLKELKDHTDSNIVVMLVGNK 126
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
S L +RAVSA+D F+E +GLFF E SAL NV+ AF ++L +IY VSKK L+ G
Sbjct: 127 SVLRHLRAVSADDGQSFSEKEGLFFMETSALESTNVENAFKQILTQIYRVVSKKALDVG- 185
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLSTCSC 237
+ P + G + G +++ KK+ CS
Sbjct: 186 ---EDPSAVPGKGQTISVGNKDDVTATKKVGCCSA 217
>gi|255566524|ref|XP_002524247.1| protein with unknown function [Ricinus communis]
gi|223536524|gb|EEF38171.1| protein with unknown function [Ricinus communis]
Length = 216
Score = 243 bits (620), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 123/201 (61%), Positives = 152/201 (75%), Gaps = 7/201 (3%)
Query: 21 IPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQ 80
+ + DY+FK+V+IGDS VGKS ILSRFT+NEF +SKSTIGVEF TRT+ + GK +KAQ
Sbjct: 5 VDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQ 64
Query: 81 IWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIG 140
IWDTAGQERYRA+TSAYYRGA+GA++VYDITKRQ+FD+V RW+ ELR HADS+I I++ G
Sbjct: 65 IWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAG 124
Query: 141 NKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL-- 198
NKSDL +RAVSAEDA AE +GL F E SAL N++ AF +L +IY +SKK L
Sbjct: 125 NKSDLNHLRAVSAEDARMLAEKEGLSFLETSALEAHNIEKAFQSILLDIYHIISKKALAA 184
Query: 199 -ECGNGKVDGPPMLAGSKIDV 218
E N G P G+ I+V
Sbjct: 185 QEAANST--GLPQ--GTTINV 201
>gi|388508486|gb|AFK42309.1| unknown [Medicago truncatula]
Length = 217
Score = 243 bits (620), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 119/215 (55%), Positives = 161/215 (74%), Gaps = 5/215 (2%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D DY+FKVV+IGDS VGKS +LSRFTKNEF +SKSTIGVEF TR++ ++ K++KAQIW
Sbjct: 8 DDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIHVDDKVVKAQIW 67
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYD+T+ +F++V RW++ELR H D++I ++L+GNK
Sbjct: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVVMLVGNK 127
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
+DL +RAVS EDA F+E + +F E SAL NV++AF +L +IY VSKK LE G+
Sbjct: 128 ADLRHLRAVSTEDATSFSERENTYFMETSALESLNVESAFTEVLTQIYRVVSKKALEIGD 187
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLSTCSC 237
D + G I+V G+ ++S +KK CS
Sbjct: 188 ---DPAALPKGQTINV--GSRDDVSAVKKAGCCSA 217
>gi|351722287|ref|NP_001235959.1| GTP-binding protein [Glycine max]
gi|22597170|gb|AAN03472.1| GTP-binding protein [Glycine max]
Length = 217
Score = 243 bits (620), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 120/215 (55%), Positives = 160/215 (74%), Gaps = 7/215 (3%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D DY+FKVV+IGDS VGKS +LSRFTKNEF +SKSTIGVEF TRT+ ++ K+IKAQIW
Sbjct: 8 DDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLDVDSKVIKAQIW 67
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYD+T++ +F++V RW++ELR H D++I ++L+GNK
Sbjct: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRQATFENVDRWLKELRNHTDANIVVMLVGNK 127
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECG- 201
SDL + AVS ED +AE + L+F E SAL NV+ AF +L +IY VSKK +E
Sbjct: 128 SDLRHLVAVSTEDGKSYAEKESLYFMETSALEATNVENAFAEVLTQIYHIVSKKAVEVAE 187
Query: 202 NGKVDGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
NG P G KID+ + ++S +K++ CS
Sbjct: 188 NGTTSVPA--KGEKIDLKN----DVSALKRVGCCS 216
>gi|168008990|ref|XP_001757189.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162691687|gb|EDQ78048.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 216
Score = 243 bits (619), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 121/213 (56%), Positives = 156/213 (73%), Gaps = 5/213 (2%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIW
Sbjct: 7 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIQVDGKTIKAQIW 66
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDITK ++++V RW++ELR HADS+I I+L+GNK
Sbjct: 67 DTAGQERYRAITSAYYRGAVGALLVYDITKHVTYENVERWLKELRDHADSNIVIMLVGNK 126
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
SDL +R V +DA F+E +GL F E SAL NV+ AF R+L EIY VSKK L
Sbjct: 127 SDLKHLRGVPTDDAQAFSEKEGLSFIETSALESTNVEKAFQRILTEIYRIVSKKALASEE 186
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLSTC 235
+GP G +++ D ++KK C
Sbjct: 187 STTEGP----GQGTNIVP-LDSNSPDLKKKGCC 214
>gi|302771275|ref|XP_002969056.1| rab family GTPase [Selaginella moellendorffii]
gi|302822422|ref|XP_002992869.1| rab family GTPase [Selaginella moellendorffii]
gi|300139317|gb|EFJ06060.1| rab family GTPase [Selaginella moellendorffii]
gi|300163561|gb|EFJ30172.1| rab family GTPase [Selaginella moellendorffii]
Length = 216
Score = 243 bits (619), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 125/220 (56%), Positives = 162/220 (73%), Gaps = 8/220 (3%)
Query: 20 MIP---DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKI 76
M P D+ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TRT+ ++GK
Sbjct: 1 MAPRPDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTIQVDGKT 60
Query: 77 IKAQIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRI 136
IKAQIWDTAGQERYRA+TSAYYRGA+GA++VYDITK+ ++++V RW++ELR HADS+I I
Sbjct: 61 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKQATYENVERWLKELRDHADSNIVI 120
Query: 137 ILIGNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKK 196
+L+GNKSDL +R V+ +DA F+E +GL F E SAL NV+ AF +L EIY VSKK
Sbjct: 121 MLVGNKSDLKHLRGVATDDAQRFSEKEGLSFIETSALEATNVEKAFQSILTEIYRIVSKK 180
Query: 197 ELECGNGKVDGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
L + + GP G +I G + + + KK + CS
Sbjct: 181 ALASEDPVLVGP----GEGKAIIVGPEQD-ANTKKKACCS 215
>gi|115465467|ref|NP_001056333.1| Os05g0564400 [Oryza sativa Japonica Group]
gi|50511479|gb|AAT77401.1| putative GTP-binding protein [Oryza sativa Japonica Group]
gi|113579884|dbj|BAF18247.1| Os05g0564400 [Oryza sativa Japonica Group]
gi|215706418|dbj|BAG93274.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215766623|dbj|BAG98685.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222632570|gb|EEE64702.1| hypothetical protein OsJ_19557 [Oryza sativa Japonica Group]
Length = 217
Score = 243 bits (619), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 121/214 (56%), Positives = 159/214 (74%), Gaps = 5/214 (2%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++ K++KAQIW
Sbjct: 7 DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVVKAQIW 66
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA+VVYD+T+ +F++V RW+ EL+ H D++I I+L+GNK
Sbjct: 67 DTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWMRELKDHTDANIVIMLVGNK 126
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
+DL +RAVS EDA FAE + FF E SAL NV+ AF +L +IY VSKK L+ G+
Sbjct: 127 ADLRHLRAVSTEDAKAFAEKENTFFMETSALESMNVENAFTEVLTQIYHVVSKKALDIGD 186
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
PP G I+V G ++S +KK + CS
Sbjct: 187 DPA-APP--KGQTINV--GGKDDVSAVKKSACCS 215
>gi|356548648|ref|XP_003542712.1| PREDICTED: ras-related protein RABA1f-like [Glycine max]
Length = 217
Score = 243 bits (619), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 120/215 (55%), Positives = 160/215 (74%), Gaps = 5/215 (2%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++ K++KAQIW
Sbjct: 8 DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKVVKAQIW 67
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYD+T+ +F++V RW++ELR H D++I ++L+GNK
Sbjct: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVVMLVGNK 127
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
+DL +RAVS EDA FAE + FF E SAL NV+ AF +L +IY VSKK LE G+
Sbjct: 128 ADLRHLRAVSTEDARTFAERENTFFMETSALESLNVENAFTEVLTQIYHVVSKKALEIGD 187
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLSTCSC 237
D + G I+V G+ ++S +KK CS
Sbjct: 188 ---DPAALPKGQTINV--GSRDDVSAVKKSGCCSA 217
>gi|444436406|gb|AGE09571.1| RABA-like protein [Eucalyptus cladocalyx]
Length = 281
Score = 243 bits (619), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 121/214 (56%), Positives = 154/214 (71%), Gaps = 4/214 (1%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D DY+FK+V+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK+IKAQIW
Sbjct: 71 DDYDYLFKIVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIW 130
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYD+T+ +F++V RW+ ELR H D +I ++L+GNK
Sbjct: 131 DTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLVGNK 190
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
SDL + AVS ED FAE + LFF E SAL NV+ AF +L +IY VSKK LE
Sbjct: 191 SDLRHLLAVSTEDGKSFAEREALFFMETSALEATNVENAFAEVLTQIYNIVSKKALETSE 250
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
G KIDV G D +S +K+ CS
Sbjct: 251 QANGSAVPSQGEKIDV--GKD--VSAVKRGGCCS 280
>gi|15219955|ref|NP_173136.1| Ras-related protein RABA1b [Arabidopsis thaliana]
gi|3024526|sp|Q39222.1|RAA1B_ARATH RecName: Full=Ras-related protein RABA1b; Short=AtRABA1b; AltName:
Full=Ras-related protein Rab11; Short=AtRab11
gi|9802771|gb|AAF99840.1|AC051629_7 GTP-binding protein Rab11 [Arabidopsis thaliana]
gi|451860|gb|AAA32872.1| small GTP-binding protein [Arabidopsis thaliana]
gi|30102592|gb|AAP21214.1| At1g16920 [Arabidopsis thaliana]
gi|110735723|dbj|BAE99841.1| hypothetical protein [Arabidopsis thaliana]
gi|332191401|gb|AEE29522.1| Ras-related protein RABA1b [Arabidopsis thaliana]
Length = 216
Score = 243 bits (619), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 120/217 (55%), Positives = 160/217 (73%), Gaps = 8/217 (3%)
Query: 21 IPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQ 80
+ D DY+FKVV+IGDS VGKS +LSRFTKNEF +SKSTIGVEF TRT+ ++GK++KAQ
Sbjct: 6 VEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDGKVVKAQ 65
Query: 81 IWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIG 140
IWDTAGQERYRA+TSAYYRGA+GA++VYD+T+R +F++V RW++EL+ H D +I ++L+G
Sbjct: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENVDRWLKELKNHTDPNIVVMLVG 125
Query: 141 NKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELEC 200
NKSDL + AV ED +AE + L F E SAL NV+ AF +L +IY SKK++E
Sbjct: 126 NKSDLRHLLAVPTEDGKSYAEQESLCFMETSALEATNVEDAFAEVLTQIYRITSKKQVEA 185
Query: 201 G-NGKVDGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
G +G P G KI+V + ++S +KKL CS
Sbjct: 186 GEDGNASVPK---GEKIEVKN----DVSALKKLGCCS 215
>gi|303742|dbj|BAA02112.1| GTP-binding protein [Pisum sativum]
gi|738936|prf||2001457D GTP-binding protein
Length = 217
Score = 243 bits (619), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 120/215 (55%), Positives = 161/215 (74%), Gaps = 5/215 (2%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D DY+FKVV+IGDS VGKS +LSRFTKNEF +SKSTIGVEF TR++ ++ K++KAQIW
Sbjct: 8 DDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIW 67
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYD+T+ +F++V RW++ELR H D++I ++L+GNK
Sbjct: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVVMLVGNK 127
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
+DL +RAVS ED+ FAE + FF E SAL NV++AF +L +IY VSKK LE G+
Sbjct: 128 ADLRHLRAVSTEDSTSFAEREHTFFMETSALESLNVESAFTEVLTQIYRVVSKKALEIGD 187
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLSTCSC 237
D + G I+V G+ ++S +KK CS
Sbjct: 188 ---DPAALPKGQTINV--GSRDDVSAVKKGGCCSA 217
>gi|303744|dbj|BAA02113.1| GTP-binding protein [Pisum sativum]
gi|452361|emb|CAA82709.1| guanine nucleotide regulatory protein [Vicia faba]
gi|738937|prf||2001457E GTP-binding protein
gi|1098295|prf||2115367C small GTP-binding protein
Length = 217
Score = 243 bits (619), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 120/215 (55%), Positives = 159/215 (73%), Gaps = 7/215 (3%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D DY+FKVV+IGDS VGKS +LSRFTKNEF +SKSTIGVEF TRT+ ++ K+IKAQIW
Sbjct: 8 DDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSKVIKAQIW 67
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYD+T+ +F++V RW++ELR H DS+I ++L+GNK
Sbjct: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELRNHTDSNIVVMLVGNK 127
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECG- 201
+DL + AVS ED +AE + L+F E SAL NV+ AF +L +IY VSKK +E
Sbjct: 128 ADLRHLVAVSTEDGKSYAEKESLYFMETSALEATNVENAFAEVLTQIYHIVSKKTVEGAE 187
Query: 202 NGKVDGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
NG P G KID+ + ++S +K++ CS
Sbjct: 188 NGNASVPA--KGEKIDLKN----DVSALKRVGCCS 216
>gi|293331631|ref|NP_001167800.1| uncharacterized protein LOC100381498 [Zea mays]
gi|297609251|ref|NP_001062887.2| Os09g0327100 [Oryza sativa Japonica Group]
gi|242048968|ref|XP_002462228.1| hypothetical protein SORBIDRAFT_02g022140 [Sorghum bicolor]
gi|48716902|dbj|BAD23597.1| putative GTP-binding protein [Oryza sativa Japonica Group]
gi|125563251|gb|EAZ08631.1| hypothetical protein OsI_30905 [Oryza sativa Indica Group]
gi|125605234|gb|EAZ44270.1| hypothetical protein OsJ_28889 [Oryza sativa Japonica Group]
gi|215701082|dbj|BAG92506.1| unnamed protein product [Oryza sativa Japonica Group]
gi|223944061|gb|ACN26114.1| unknown [Zea mays]
gi|241925605|gb|EER98749.1| hypothetical protein SORBIDRAFT_02g022140 [Sorghum bicolor]
gi|255678786|dbj|BAF24801.2| Os09g0327100 [Oryza sativa Japonica Group]
Length = 216
Score = 243 bits (619), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 122/214 (57%), Positives = 160/214 (74%), Gaps = 5/214 (2%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++ K++KAQIW
Sbjct: 7 DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKVVKAQIW 66
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA+VVYD+T+ +F++V RW++ELR H D++I I+L+GNK
Sbjct: 67 DTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWLKELRDHTDANIVIMLVGNK 126
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
+DL +RAVS EDA FAE + FF E SAL NV++AF +L +IY VSKK L+ G+
Sbjct: 127 ADLRHLRAVSVEDAKGFAERESTFFMETSALESMNVESAFTEVLTQIYRVVSKKALDIGD 186
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
PP G I+V G ++S +KK CS
Sbjct: 187 DPA-APPR--GQTINV--GGKDDVSAVKKSGCCS 215
>gi|414885033|tpg|DAA61047.1| TPA: hypothetical protein ZEAMMB73_722788, partial [Zea mays]
Length = 240
Score = 242 bits (618), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 123/225 (54%), Positives = 164/225 (72%), Gaps = 5/225 (2%)
Query: 12 HRHQQQENMIPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVT 71
+R ++ D DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++
Sbjct: 20 NRGSGRKGRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIR 79
Query: 72 INGKIIKAQIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHAD 131
++ K++KAQIWDTAGQERYRA+TSAYYRGA+GA+VVYD+T+ +F++V RW++ELR H D
Sbjct: 80 VDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWLKELRDHTD 139
Query: 132 SSIRIILIGNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYG 191
++I I+L+GNK+DL +RAVS EDA FAE + FF E SAL NV++AF +L +IY
Sbjct: 140 ANIVIMLVGNKADLRHLRAVSVEDAKGFAERESTFFMETSALESMNVESAFTEVLTQIYR 199
Query: 192 AVSKKELECGNGKVDGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
VSKK L+ G+ PP G I+V G ++S +KK CS
Sbjct: 200 VVSKKALDIGDDPA-APPR--GQTINV--GGKDDVSAVKKSGCCS 239
>gi|225443554|ref|XP_002277579.1| PREDICTED: ras-related protein RABA1f [Vitis vinifera]
Length = 217
Score = 242 bits (618), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 120/215 (55%), Positives = 160/215 (74%), Gaps = 5/215 (2%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++ K++KAQIW
Sbjct: 8 DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKVVKAQIW 67
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYD+T+ +F++V RW++ELR H DS+I I+L+GNK
Sbjct: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNK 127
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
+DL +RAVS EDA FAE + FF E SAL NV+ AF +L +IY VS+K L+ G+
Sbjct: 128 ADLRHLRAVSTEDAKAFAERENNFFMETSALESMNVENAFTEVLTQIYRVVSRKALDIGD 187
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLSTCSC 237
D + G I+V G ++S +KK+ CS
Sbjct: 188 ---DPAALPKGQTINV--GTKDDVSAVKKVGCCSA 217
>gi|255642121|gb|ACU21326.1| unknown [Glycine max]
Length = 217
Score = 242 bits (618), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 121/215 (56%), Positives = 160/215 (74%), Gaps = 5/215 (2%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D DY+FKVV+IGDS VGKS +LSRFTKNEF +SKSTIGVEF TR++ ++ KI+KAQIW
Sbjct: 8 DDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIHVDDKIVKAQIW 67
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYD+T+ +F++V +W++ELR H D++I I+L+GNK
Sbjct: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVEKWLKELRDHTDANIVIMLVGNK 127
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
+DL +RAVS +DA FAE + FF E SAL NVD AF +L +IY VS+K LE G+
Sbjct: 128 ADLRHLRAVSTDDAKAFAERENTFFMETSALESLNVDNAFTEVLTQIYRVVSRKTLEIGD 187
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLSTCSC 237
D + G I+V G+ ++S +KK CS
Sbjct: 188 ---DPAALPKGQTINV--GSRDDVSAVKKSGCCSA 217
>gi|212532303|ref|XP_002146308.1| Ras GTPase Rab11, putative [Talaromyces marneffei ATCC 18224]
gi|212532305|ref|XP_002146309.1| Ras GTPase Rab11, putative [Talaromyces marneffei ATCC 18224]
gi|242775273|ref|XP_002478610.1| Ras GTPase Rab11, putative [Talaromyces stipitatus ATCC 10500]
gi|210071672|gb|EEA25761.1| Ras GTPase Rab11, putative [Talaromyces marneffei ATCC 18224]
gi|210071673|gb|EEA25762.1| Ras GTPase Rab11, putative [Talaromyces marneffei ATCC 18224]
gi|218722229|gb|EED21647.1| Ras GTPase Rab11, putative [Talaromyces stipitatus ATCC 10500]
Length = 211
Score = 242 bits (618), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 116/184 (63%), Positives = 146/184 (79%)
Query: 20 MIPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKA 79
M D+ D++FKVV+IGDS VGKS +LSRFT+NEF DSKSTIGVEF TR++ ++ K IKA
Sbjct: 1 MANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKA 60
Query: 80 QIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILI 139
QIWDTAGQERYRA+TSAYYRGA+GA++VYDI+K Q++D+V RW++ELR HADS+I I+L+
Sbjct: 61 QIWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYDNVTRWLKELRDHADSNIVIMLV 120
Query: 140 GNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELE 199
GNKSDL +RAV EDA +FA + L F E SAL+ NV+ AF +L EIY VS K L+
Sbjct: 121 GNKSDLRHLRAVPTEDAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALD 180
Query: 200 CGNG 203
G G
Sbjct: 181 QGEG 184
>gi|225465200|ref|XP_002264444.1| PREDICTED: ras-related protein RABA2a [Vitis vinifera]
gi|297739506|emb|CBI29688.3| unnamed protein product [Vitis vinifera]
Length = 215
Score = 242 bits (618), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 121/203 (59%), Positives = 154/203 (75%), Gaps = 4/203 (1%)
Query: 22 PDK-IDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQ 80
PD+ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TRT+ + G+ +KAQ
Sbjct: 5 PDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQ 64
Query: 81 IWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIG 140
IWDTAGQERYRA+TSAYYRGALGA++VYD+TK +F++V+RW++ELR HADS+I I+LIG
Sbjct: 65 IWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMLIG 124
Query: 141 NKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELEC 200
NK+DL +RAV+ EDA FAE +GL F E SAL NV+ AF +L EIY +SKK L
Sbjct: 125 NKTDLKHLRAVATEDAQGFAEKEGLSFIETSALEATNVEKAFQTILGEIYRIISKKTLSS 184
Query: 201 GNGKVDGPPMLAGSKIDVISGAD 223
+ P + K V+ G+D
Sbjct: 185 DD---PAPAGIKEGKTLVVDGSD 204
>gi|452357|emb|CAA82708.1| guanine nucleotide regulatory protein [Vicia faba]
gi|1098294|prf||2115367B small GTP-binding protein
Length = 207
Score = 242 bits (618), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 119/212 (56%), Positives = 160/212 (75%), Gaps = 5/212 (2%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
DY+FKVV+IGDS VGKS +LSRFTKNEF +SKSTIGVEF TR++ ++ K++KAQIWDTA
Sbjct: 1 DYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTA 60
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQERYRA+TSAYYRGA+GA++VYD+T+ +F++V RW++ELR H D++I ++L+GNK+DL
Sbjct: 61 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVVMLVGNKADL 120
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNGKV 205
+RAVS ED+ FAE + FF E SAL NV++AF +L +IY VSKK LE G+
Sbjct: 121 RHLRAVSTEDSTAFAERENTFFMETSALESLNVESAFTEVLTQIYRVVSKKALEIGD--- 177
Query: 206 DGPPMLAGSKIDVISGADLEISEMKKLSTCSC 237
D + G I+V G+ ++S +KK CS
Sbjct: 178 DPAALPKGQTINV--GSRDDVSAVKKGGCCSA 207
>gi|255554684|ref|XP_002518380.1| protein with unknown function [Ricinus communis]
gi|223542475|gb|EEF44016.1| protein with unknown function [Ricinus communis]
Length = 215
Score = 242 bits (618), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 120/215 (55%), Positives = 159/215 (73%), Gaps = 7/215 (3%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++ KI+KAQIW
Sbjct: 8 DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKIVKAQIW 67
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYD+T+ +F++V RW++ELR H D++I I+L+GNK
Sbjct: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDANIVIMLVGNK 127
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
+DL +RAVS EDA FAE + FF E SAL NV+ AF +L +IY VS+K LE G+
Sbjct: 128 ADLRHLRAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEVGD 187
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLSTCSC 237
D + G I+V ++S +KK+ CS
Sbjct: 188 ---DPGALPKGQTINVKD----DVSAVKKVGCCSA 215
>gi|388512933|gb|AFK44528.1| unknown [Lotus japonicus]
Length = 217
Score = 242 bits (618), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 120/214 (56%), Positives = 159/214 (74%), Gaps = 5/214 (2%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D DY FKVV+IGDS VGKS +LSRFTKNEF +SKSTIGVEF TR++ ++ K++KAQIW
Sbjct: 8 DDYDYPFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIW 67
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYD+T+ +F++V RW++ELR H D++I ++L+GNK
Sbjct: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDTNIVVMLVGNK 127
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
+DL +RAVS ED+ FAE + FF E SAL NV+ AF +L +IY VSKK LE G+
Sbjct: 128 ADLRHLRAVSTEDSTAFAERENTFFMETSALESLNVENAFTEVLTQIYRVVSKKALEIGD 187
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
D + G I+V G+ ++S +KK CS
Sbjct: 188 ---DPAALPKGQTINV--GSRDDVSAVKKSGCCS 216
>gi|356501105|ref|XP_003519369.1| PREDICTED: ras-related protein Rab2BV-like [Glycine max]
Length = 217
Score = 242 bits (618), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 118/178 (66%), Positives = 142/178 (79%)
Query: 21 IPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQ 80
+ + DY+FKVV+IGDS VGKS ILSRFT+NEF +SKSTIGVEF TRT+ + GK +KAQ
Sbjct: 5 VDHEYDYLFKVVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQ 64
Query: 81 IWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIG 140
IWDTAGQERYRA+TSAYYRGA+GA++VYDITKRQ+FD+V RW+ ELR HADS+I I++ G
Sbjct: 65 IWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAG 124
Query: 141 NKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL 198
NKSDL +RAVS EDA AE +GL F E SAL NVD AF +L +IY +SKK L
Sbjct: 125 NKSDLNHLRAVSTEDAQSLAEREGLSFLETSALEAYNVDKAFQTILFDIYHIISKKAL 182
>gi|357452099|ref|XP_003596326.1| Ras-related protein Rab-11B [Medicago truncatula]
gi|355485374|gb|AES66577.1| Ras-related protein Rab-11B [Medicago truncatula]
gi|388517873|gb|AFK46998.1| unknown [Medicago truncatula]
Length = 217
Score = 242 bits (617), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 120/215 (55%), Positives = 159/215 (73%), Gaps = 7/215 (3%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D DY+FKVV+IGDS VGKS +LSRFTKNEF +SKSTIGVEF TRT+ ++ K+IKAQIW
Sbjct: 8 DDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSKVIKAQIW 67
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYD+T+ +F++V RW++ELR H DS+I ++L+GNK
Sbjct: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELRNHTDSNIVVMLVGNK 127
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECG- 201
+DL + AVS ED +AE + L+F E SAL NV+ AF +L +IY VSKK +E
Sbjct: 128 ADLRHLVAVSTEDGKSYAEKESLYFMETSALEATNVENAFAEVLTQIYRIVSKKAVEGAE 187
Query: 202 NGKVDGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
NG P G KID+ + ++S +K++ CS
Sbjct: 188 NGNASVPA--KGEKIDLKN----DVSALKRVGCCS 216
>gi|158828213|gb|ABW81091.1| Gtpbnd1 [Cleome spinosa]
Length = 216
Score = 242 bits (617), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 115/180 (63%), Positives = 143/180 (79%)
Query: 19 NMIPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIK 78
N I ++ DY+FK+V+IGDS VGKS ILSRFT+NEF +SKSTIGVEF TRT+ + GK +K
Sbjct: 3 NRIDNEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVK 62
Query: 79 AQIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIIL 138
AQIWDTAGQERYRA+TSAYYRGA+GA++VYDITKRQ+F++V RW+ ELR HADS+I I++
Sbjct: 63 AQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFENVPRWLRELRDHADSNIVIMM 122
Query: 139 IGNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL 198
GNKSDL +R++S ED AE +GL F E SAL N++ AF +L EIY VSKK L
Sbjct: 123 AGNKSDLNHLRSISDEDGRSLAEKEGLSFLETSALEASNIEKAFQSILSEIYHIVSKKAL 182
>gi|212723418|ref|NP_001131787.1| uncharacterized protein LOC100193158 [Zea mays]
gi|194692530|gb|ACF80349.1| unknown [Zea mays]
gi|414589339|tpg|DAA39910.1| TPA: hypothetical protein ZEAMMB73_058303 [Zea mays]
Length = 216
Score = 242 bits (617), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 122/214 (57%), Positives = 160/214 (74%), Gaps = 5/214 (2%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++ K++KAQIW
Sbjct: 7 DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKVVKAQIW 66
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA+VVYD+T+ +F++V RW++ELR H D++I I+L+GNK
Sbjct: 67 DTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWLKELRDHTDANIVIMLVGNK 126
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
+DL +RAVS EDA FAE + FF E SAL NV++AF +L +IY VSKK L+ G+
Sbjct: 127 ADLRHLRAVSVEDAKGFAEREMTFFMETSALESMNVESAFTEVLTQIYRVVSKKALDIGD 186
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
PP G I+V G ++S +KK CS
Sbjct: 187 DPA-APPR--GQTINV--GGKDDVSAVKKAGCCS 215
>gi|357445241|ref|XP_003592898.1| Ras-related protein RABA2a [Medicago truncatula]
gi|92893896|gb|ABE91946.1| Ras GTPase; Sigma-54 factor, interaction region [Medicago
truncatula]
gi|355481946|gb|AES63149.1| Ras-related protein RABA2a [Medicago truncatula]
Length = 220
Score = 242 bits (617), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 116/196 (59%), Positives = 147/196 (75%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
++ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TRT+ + G+ +KAQIW
Sbjct: 10 EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQIW 69
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGALGA++VYD+TK +FD+V RW++ELR HAD++I I+LIGNK
Sbjct: 70 DTAGQERYRAITSAYYRGALGALLVYDVTKPTTFDNVTRWLKELRDHADANIVIMLIGNK 129
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
+DL +RAV+ EDA +AE +GL F E SAL NV+ AF L EIY +SKK L N
Sbjct: 130 TDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTTLGEIYRIISKKSLSTAN 189
Query: 203 GKVDGPPMLAGSKIDV 218
+ G I +
Sbjct: 190 EPAAAANIKEGKTIAI 205
>gi|115456287|ref|NP_001051744.1| Os03g0823700 [Oryza sativa Japonica Group]
gi|27545031|gb|AAO18437.1| Ras-related GTP-binding protein [Oryza sativa Japonica Group]
gi|108711823|gb|ABF99618.1| Ras-related protein Rab11A, putative, expressed [Oryza sativa
Japonica Group]
gi|113550215|dbj|BAF13658.1| Os03g0823700 [Oryza sativa Japonica Group]
gi|215692445|dbj|BAG87865.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222626072|gb|EEE60204.1| hypothetical protein OsJ_13172 [Oryza sativa Japonica Group]
Length = 215
Score = 242 bits (617), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 117/202 (57%), Positives = 152/202 (75%), Gaps = 1/202 (0%)
Query: 21 IPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQ 80
+ ++ DY+FK+V+IGDS VGKS ILSRFT+NEF +SKSTIGVEF TRT+ I G+ IKAQ
Sbjct: 5 VDNEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQIEGQTIKAQ 64
Query: 81 IWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIG 140
IWDTAGQERYRA+TSAYYRGA+GA++VYDITK+Q+F+++ RW+ ELR HADS+I I+++G
Sbjct: 65 IWDTAGQERYRAITSAYYRGAVGALLVYDITKKQTFENIQRWLRELRDHADSNIVIMMVG 124
Query: 141 NKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELEC 200
NKSDL +R+V ED AE +GL F E SAL NV+ AF +L++I+ +SKK L
Sbjct: 125 NKSDLNHLRSVPEEDGQALAEKEGLSFLETSALEALNVEKAFQTILKDIHQIISKKALAA 184
Query: 201 GNGKVDGPPMLAGSKIDVISGA 222
GPP G+ I+V A
Sbjct: 185 QEAAGSGPPT-QGTTINVTDSA 205
>gi|326489368|dbj|BAK01667.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326531904|dbj|BAK01328.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 215
Score = 242 bits (617), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 117/198 (59%), Positives = 150/198 (75%), Gaps = 1/198 (0%)
Query: 21 IPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQ 80
+ ++ DY+FK+V+IGDS VGKS ILSRFT+NEF +SKSTIGVEF TRT+ I GK IKAQ
Sbjct: 5 VDNEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQIEGKTIKAQ 64
Query: 81 IWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIG 140
IWDTAGQERYRA+TSAYYRGA+GA++VYDITK+Q+F+++ RW+ ELR HADS+I I+++G
Sbjct: 65 IWDTAGQERYRAITSAYYRGAVGALLVYDITKKQTFENINRWLRELRDHADSNIVIMMVG 124
Query: 141 NKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELEC 200
NKSDL +R+V ED AE +GL F E SAL NV+ AF +L +I+ +SKK L
Sbjct: 125 NKSDLNHLRSVPEEDGQALAEKEGLSFLETSALEALNVEKAFQTILSDIHQIISKKALAA 184
Query: 201 GNGKVDGPPMLAGSKIDV 218
GPP G+ I+V
Sbjct: 185 QEAAGSGPPT-QGTTINV 201
>gi|294463532|gb|ADE77295.1| unknown [Picea sitchensis]
Length = 214
Score = 242 bits (617), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 126/215 (58%), Positives = 158/215 (73%), Gaps = 6/215 (2%)
Query: 21 IPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQ 80
+ D+ D++FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TRT+ ++GK IKAQ
Sbjct: 5 VDDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTIQVDGKTIKAQ 64
Query: 81 IWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIG 140
IWDTAGQERYRA+TSAYYRGA+GA++VYDITK +FD+V RW+ ELR HADS+I I+L+G
Sbjct: 65 IWDTAGQERYRAITSAYYRGAVGALLVYDITKNATFDNVKRWLRELRDHADSNIVIMLVG 124
Query: 141 NKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELEC 200
NKSDL MRAV +DA +FAE +GL F E SAL NV+ +F +L EIY V +K L
Sbjct: 125 NKSDLSHMRAVPIDDAQDFAEKEGLSFMETSALESTNVEKSFQSILTEIYQIVKRKSLAA 184
Query: 201 GNGKVDGPPMLAGSKIDVISGADLEISEMKKLSTC 235
GP G+ I+V +D E + KK S C
Sbjct: 185 EEAASAGPSQ--GTPINV---SDAE-TIAKKRSCC 213
>gi|15239462|ref|NP_200894.1| RAB GTPase homolog A1F [Arabidopsis thaliana]
gi|75171043|sp|Q9FJH0.1|RAA1F_ARATH RecName: Full=Ras-related protein RABA1f; Short=AtRABA1f
gi|10176913|dbj|BAB10106.1| GTP-binding protein, ras-like [Arabidopsis thaliana]
gi|26452359|dbj|BAC43265.1| putative GTP-binding protein [Arabidopsis thaliana]
gi|28950757|gb|AAO63302.1| At5g60860 [Arabidopsis thaliana]
gi|332010004|gb|AED97387.1| RAB GTPase homolog A1F [Arabidopsis thaliana]
Length = 217
Score = 242 bits (617), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 119/214 (55%), Positives = 161/214 (75%), Gaps = 5/214 (2%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++ KI+KAQIW
Sbjct: 8 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKIVKAQIW 67
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYD+T+ +F++V RW++ELR H D++I I+ +GNK
Sbjct: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMFVGNK 127
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
+DL +RAVS EDA FAE + FF E SAL NV+ AF +L +IY VS+K L+ G+
Sbjct: 128 ADLRHLRAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLSQIYRVVSRKALDIGD 187
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
D + G I+V G+ ++S +KK+ CS
Sbjct: 188 ---DPAALPKGQTINV--GSKDDVSAVKKVGCCS 216
>gi|356517446|ref|XP_003527398.1| PREDICTED: ras-related protein RABA1f-like isoform 1 [Glycine max]
gi|356517448|ref|XP_003527399.1| PREDICTED: ras-related protein RABA1f-like isoform 2 [Glycine max]
Length = 217
Score = 242 bits (617), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 121/215 (56%), Positives = 159/215 (73%), Gaps = 5/215 (2%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D DY+FKVV+IGDS VGKS +LSRFTKNEF +SKSTIGVEF TR++ ++ KI+KAQIW
Sbjct: 8 DDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIHVDDKIVKAQIW 67
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYD+T+ +F++V RW++ELR H D++I I+L+GNK
Sbjct: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMLVGNK 127
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
+DL +RAV+ DA FAE + FF E SAL NVD AF +L +IY VS+K LE G+
Sbjct: 128 ADLRHLRAVATNDAKAFAERENTFFMETSALESLNVDNAFTEVLTQIYRVVSRKTLEIGD 187
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLSTCSC 237
D + G I+V G+ ++S +KK CS
Sbjct: 188 ---DPAALPKGQTINV--GSRDDVSAVKKSGCCSA 217
>gi|358248612|ref|NP_001239655.1| uncharacterized protein LOC100810759 [Glycine max]
gi|255646959|gb|ACU23949.1| unknown [Glycine max]
Length = 217
Score = 242 bits (617), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 120/215 (55%), Positives = 159/215 (73%), Gaps = 7/215 (3%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D DY+FKVV+IGDS VGKS +LSRFTKNEF +SKSTIGVEF TRT+ ++ K+IKAQIW
Sbjct: 8 DDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSKVIKAQIW 67
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYD+T+ +F++V RW++ELR H D++I ++L+GNK
Sbjct: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELRNHTDANIVVMLVGNK 127
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECG- 201
SDL + AVS ED +AE + L+F E SAL NV+ AF +L +IY VSKK +E
Sbjct: 128 SDLRHLVAVSTEDGKSYAEKESLYFMETSALEATNVENAFAEVLTQIYRIVSKKAVEGAE 187
Query: 202 NGKVDGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
NG P G KID+ + ++S +K++ CS
Sbjct: 188 NGTASVPA--KGEKIDLKN----DVSALKRVGCCS 216
>gi|356538966|ref|XP_003537971.1| PREDICTED: ras-related protein Rab11C-like [Glycine max]
Length = 216
Score = 241 bits (616), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 119/198 (60%), Positives = 147/198 (74%)
Query: 21 IPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQ 80
+ + DY+FK+V+IGDS VGKS ILSRFT+NEF +SKSTIGVEF TRT+ + GK +KAQ
Sbjct: 5 VDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQ 64
Query: 81 IWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIG 140
IWDTAGQERYRA+TSAYYRGA+GA++VYDITKRQ+FD+V RW+ ELR HADS+I I++ G
Sbjct: 65 IWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAG 124
Query: 141 NKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELEC 200
NKSDL +RAVS +D AE +GL F E SAL N++ AF +L EIY VSKK L
Sbjct: 125 NKSDLSHLRAVSEDDGQALAEREGLSFLETSALEATNIEKAFQTILTEIYHIVSKKALAA 184
Query: 201 GNGKVDGPPMLAGSKIDV 218
V G+ I+V
Sbjct: 185 QEAAVGTTLPGQGTTINV 202
>gi|21555752|gb|AAM63927.1| guanine nucleotide regulatory protein, putative [Arabidopsis
thaliana]
Length = 216
Score = 241 bits (616), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 120/217 (55%), Positives = 159/217 (73%), Gaps = 8/217 (3%)
Query: 21 IPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQ 80
+ D DY+FKVV+IGDS VGKS +LSRFTKNEF +SKSTIGVEF TRT ++GK++KAQ
Sbjct: 6 VEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTFKVDGKVVKAQ 65
Query: 81 IWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIG 140
IWDTAGQERYRA+TSAYYRGA+GA++VYD+T+R +F++V RW++EL+ H D +I ++L+G
Sbjct: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENVDRWLKELKNHTDPNIVVMLVG 125
Query: 141 NKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELEC 200
NKSDL + AV ED +AE + L F E SAL NV+ AF +L +IY SKK++E
Sbjct: 126 NKSDLRHLLAVPTEDGKSYAEQESLCFMETSALEATNVEDAFAEVLTQIYRITSKKQVEA 185
Query: 201 G-NGKVDGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
G +G P G KI+V + ++S +KKL CS
Sbjct: 186 GEDGNASVPK---GEKIEVKN----DVSALKKLGCCS 215
>gi|348674018|gb|EGZ13837.1| hypothetical protein PHYSODRAFT_513156 [Phytophthora sojae]
Length = 218
Score = 241 bits (616), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 119/213 (55%), Positives = 154/213 (72%), Gaps = 2/213 (0%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FK+V+IGDS VGKS +LSRFT+NEF +SKSTIGVEF T+++ GK IKAQIW
Sbjct: 7 DEYDYLFKIVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIVAEGKTIKAQIW 66
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDITK +F++V RW++ELR HAD++ I+L+GNK
Sbjct: 67 DTAGQERYRAITSAYYRGAVGALLVYDITKHGTFENVERWLKELRDHADANTVIMLVGNK 126
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
SDL +RAVS E+A+ FAE L F E SAL VDTAF R+L EIY +S+K ++
Sbjct: 127 SDLRHLRAVSTEEAMAFAEKNNLAFIETSALEATGVDTAFQRILTEIYKLMSRKTIQAEE 186
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLSTC 235
P G+ I + + E + KK S C
Sbjct: 187 NATASLP--TGNSIAITAENTTESQKKKKKSGC 217
>gi|116791471|gb|ABK25992.1| unknown [Picea sitchensis]
Length = 217
Score = 241 bits (616), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 120/214 (56%), Positives = 157/214 (73%), Gaps = 4/214 (1%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++T++ K+IKAQIW
Sbjct: 7 DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSITVDDKVIKAQIW 66
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYD+T+ +F++V RW++ELR H D++I I+L+GNK
Sbjct: 67 DTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMLVGNK 126
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
+DL +RAVS ED FAE + +F E SAL NV+ AF +L +IY VSKK L+ G
Sbjct: 127 ADLRHLRAVSIEDGKAFAERENTYFMETSALESTNVENAFTEVLSQIYRIVSKKALDVGE 186
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
P G I V G +++ MKK+ CS
Sbjct: 187 DPAAVPS--KGQTIHV--GNKDDVTAMKKVGCCS 216
>gi|115461617|ref|NP_001054408.1| Os05g0105100 [Oryza sativa Japonica Group]
gi|46359908|gb|AAS88840.1| putative GTP-binding protein [Oryza sativa Japonica Group]
gi|52353601|gb|AAU44167.1| putative GTP-binding protein [Oryza sativa Japonica Group]
gi|113577959|dbj|BAF16322.1| Os05g0105100 [Oryza sativa Japonica Group]
gi|125550513|gb|EAY96222.1| hypothetical protein OsI_18113 [Oryza sativa Indica Group]
gi|215734964|dbj|BAG95686.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222629896|gb|EEE62028.1| hypothetical protein OsJ_16810 [Oryza sativa Japonica Group]
Length = 220
Score = 241 bits (616), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 113/176 (64%), Positives = 148/176 (84%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
++ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TRT+ + GKIIKAQIW
Sbjct: 9 EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLHVEGKIIKAQIW 68
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGALGAV+VYD++K +FD+++RW++ELR HAD++IRI+L+GNK
Sbjct: 69 DTAGQERYRAITSAYYRGALGAVLVYDVSKPTTFDNISRWLKELRDHADANIRIMLVGNK 128
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL 198
+DL +RAV+ +DA +FAE +GL + E SAL NV+ AF +L +IY A+SKK +
Sbjct: 129 TDLKHLRAVATDDAHKFAEAEGLSYIETSALEATNVEEAFQLILGDIYRAISKKPV 184
>gi|148910011|gb|ABR18090.1| unknown [Picea sitchensis]
Length = 213
Score = 241 bits (615), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 117/176 (66%), Positives = 142/176 (80%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TRTV + GK IKAQIW
Sbjct: 7 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTVQVEGKTIKAQIW 66
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDITK +F++V RW++ELR HADS+I I+L+GNK
Sbjct: 67 DTAGQERYRAITSAYYRGAVGALLVYDITKPTTFENVGRWLKELRDHADSNIVIMLVGNK 126
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL 198
SDL +R VS EDA FAE +GL F E SAL NV+ AF +L EI+ +SKK L
Sbjct: 127 SDLKHLRGVSTEDAQSFAEKEGLSFLETSALEATNVERAFQTILAEIHRIISKKAL 182
>gi|67078858|gb|AAY64453.1| small GTPase rab11-3 [Gracilaria lemaneiformis]
Length = 214
Score = 241 bits (615), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 117/186 (62%), Positives = 147/186 (79%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGD+ VGKS +LSRFT+NEF +SKSTIGVEF TR++ GKIIKAQIW
Sbjct: 6 DEYDYLFKVVLIGDAGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIQCEGKIIKAQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDITK+ SFD+V RW++EL+ HAD++I I+L+GNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGALLVYDITKKDSFDNVQRWLKELKDHADANIVIMLVGNK 125
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
SDL ++AV+ +DA FAE GL F E SAL+ NV+ AF +L EIY SKK LE G+
Sbjct: 126 SDLQHLKAVTTDDASAFAESNGLSFIETSALDNSNVEEAFRSILSEIYRLGSKKALEKGS 185
Query: 203 GKVDGP 208
P
Sbjct: 186 TSNFAP 191
>gi|224121856|ref|XP_002330670.1| predicted protein [Populus trichocarpa]
gi|222872274|gb|EEF09405.1| predicted protein [Populus trichocarpa]
Length = 216
Score = 241 bits (615), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 120/215 (55%), Positives = 161/215 (74%), Gaps = 6/215 (2%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D DY+FKVV+IGDS VGKS +LSRFTKNEF +SKSTIGVEF TR++ ++ K++KAQIW
Sbjct: 8 DDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIHVDDKVVKAQIW 67
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYD+T+ +F++V RW++ELR H +S+I I+L+GNK
Sbjct: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTESNIVIMLVGNK 127
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
+DL +RAV+ EDA FAE + FF E SAL NV+ AF +L +IY VS+K L+ G+
Sbjct: 128 ADLRHLRAVTTEDATAFAEREKTFFMETSALESLNVENAFTEVLTQIYHVVSRKALDVGD 187
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLSTCSC 237
D + G I+V G D ++S +KK+ CS
Sbjct: 188 ---DPAALPKGQTINV--GKD-DVSAVKKVGCCSA 216
>gi|378734873|gb|EHY61332.1| Ras-like protein Rab-11B [Exophiala dermatitidis NIH/UT8656]
Length = 210
Score = 241 bits (615), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 119/199 (59%), Positives = 153/199 (76%), Gaps = 3/199 (1%)
Query: 20 MIPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKA 79
M D+ D++FKVV+IGDS VGKS +LSRFT+NEF DSKSTIGVEF TR++ ++ K IKA
Sbjct: 1 MANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDTKTIKA 60
Query: 80 QIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILI 139
QIWDTAGQERYRA+TSAYYRGA+GA++VYDI+KRQ++D+V RW++ELR HAD++I I+L+
Sbjct: 61 QIWDTAGQERYRAITSAYYRGAVGALLVYDISKRQTYDNVTRWLKELRDHADANIVIMLV 120
Query: 140 GNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELE 199
GNKSDL +RAV E+A +FA + L F E SAL+ NV+ AF +L EIY VS K L+
Sbjct: 121 GNKSDLRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALD 180
Query: 200 CGNGKVDGPPMLAGSKIDV 218
G+ P G KID+
Sbjct: 181 SGDA-AQAPT--GGVKIDM 196
>gi|297793649|ref|XP_002864709.1| hypothetical protein ARALYDRAFT_919325 [Arabidopsis lyrata subsp.
lyrata]
gi|297310544|gb|EFH40968.1| hypothetical protein ARALYDRAFT_919325 [Arabidopsis lyrata subsp.
lyrata]
Length = 217
Score = 241 bits (615), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 119/214 (55%), Positives = 160/214 (74%), Gaps = 5/214 (2%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++ KI+KAQIW
Sbjct: 8 DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKIVKAQIW 67
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYD+T+ +F+++ RW++ELR H DS+I I+ +GNK
Sbjct: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENLERWLKELRDHTDSNIVIMFVGNK 127
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
+DL +RAVS EDA FAE + FF E SAL NV+ AF +L +IY VS+K L+ G+
Sbjct: 128 ADLRHLRAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLSQIYRVVSRKALDIGD 187
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
D + G I+V G+ ++S +KK+ CS
Sbjct: 188 ---DPAALPKGQTINV--GSKDDVSAVKKVGCCS 216
>gi|255950668|ref|XP_002566101.1| Pc22g22060 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211593118|emb|CAP99494.1| Pc22g22060 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 209
Score = 241 bits (615), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 119/201 (59%), Positives = 154/201 (76%), Gaps = 3/201 (1%)
Query: 20 MIPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKA 79
M D+ D++FKVV+IGDS VGKS +LSRFT+NEF DSKSTIGVEF TR++ ++ K IKA
Sbjct: 1 MANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKA 60
Query: 80 QIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILI 139
QIWDTAGQERYRA+TSAYYRGA+GA++VYDI+K Q++++V RW++ELR HADS+I I+L+
Sbjct: 61 QIWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVNRWLKELRDHADSNIVIMLV 120
Query: 140 GNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELE 199
GNKSDL +RAV E+A +FA + L F E SAL+ NV+ AF +L EIY VS K L+
Sbjct: 121 GNKSDLRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALD 180
Query: 200 CGNGK---VDGPPMLAGSKID 217
G G +D P++ SK D
Sbjct: 181 NGEGGQQVLDRRPVIDPSKQD 201
>gi|3024504|sp|Q40521.1|RB11B_TOBAC RecName: Full=Ras-related protein Rab11B
gi|623578|gb|AAA74113.1| putative [Nicotiana tabacum]
Length = 217
Score = 241 bits (615), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 122/214 (57%), Positives = 159/214 (74%), Gaps = 6/214 (2%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D DY+FK+V+IGDS VGKS +LSRF++NEF +SKSTIGVEF TR++ ++ KI+KAQIW
Sbjct: 9 DDYDYLFKLVLIGDSGVGKSNLLSRFSRNEFNLESKSTIGVEFATRSIRVDDKIVKAQIW 68
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA+VVYDIT+ +F++V RW++ELR H D +I I+L+GNK
Sbjct: 69 DTAGQERYRAITSAYYRGAVGALVVYDITRHVTFENVERWLKELRDHTDQNIVIMLVGNK 128
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
+DL +RAVS EDA FAE + FF E SAL NV+ AF +L EIY V +K LE G+
Sbjct: 129 ADLRHLRAVSTEDAKAFAERENTFFMETSALESLNVENAFTEVLTEIYKVVCRKALEVGD 188
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
D + G I+V G D ++S +KK+ CS
Sbjct: 189 ---DPAALPKGQTINV--GKD-DVSAVKKVGCCS 216
>gi|255568357|ref|XP_002525153.1| protein with unknown function [Ricinus communis]
gi|223535612|gb|EEF37280.1| protein with unknown function [Ricinus communis]
Length = 216
Score = 241 bits (615), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 120/215 (55%), Positives = 161/215 (74%), Gaps = 6/215 (2%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++ K++KAQIW
Sbjct: 8 DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVVKAQIW 67
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYD+T+ +F++V RW++ELR H DS+I I+L+GNK
Sbjct: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNK 127
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
+DL +RAV+ EDA FAE + FF E SAL NV+ AF +L +IY VS+K L+ G+
Sbjct: 128 ADLRHLRAVTTEDAKAFAERESTFFMETSALESLNVENAFTEVLTQIYRVVSRKALDVGD 187
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLSTCSC 237
D + G I+V G D ++S +KK+ CS
Sbjct: 188 ---DPAALPKGQTINV--GKD-DVSAVKKVGCCSA 216
>gi|359493755|ref|XP_003634661.1| PREDICTED: ras-related protein Rab11D isoform 2 [Vitis vinifera]
Length = 218
Score = 241 bits (615), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 119/214 (55%), Positives = 156/214 (72%), Gaps = 4/214 (1%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D DY+FKVV+IGDS VGKS +LSRFTKNEF +SKSTIGVEF TRT+ ++GK+IKAQIW
Sbjct: 8 DDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGKVIKAQIW 67
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYD+T+ +F++V RW++ELR H D +I ++L+GNK
Sbjct: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELRNHTDPNIVVMLVGNK 127
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
SDL + AVS ED +AE + L+F E SAL NV+ AF +L +IY VSKK +E G+
Sbjct: 128 SDLRHLVAVSTEDGKTYAERESLYFMETSALEATNVENAFAEVLTQIYRIVSKKSVEGGD 187
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
G +I+V A S +K++ CS
Sbjct: 188 EGAASSVPAKGERINVKDDA----SALKRVGCCS 217
>gi|388497830|gb|AFK36981.1| unknown [Lotus japonicus]
Length = 217
Score = 241 bits (615), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 122/215 (56%), Positives = 160/215 (74%), Gaps = 5/215 (2%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D DY+FKVV+IGDS VGKS +LSRFTKNEF +SKSTIGVEF TR++ ++ KI+KAQIW
Sbjct: 8 DDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIHVDDKIVKAQIW 67
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYD+T+ +F++V RW++ELR H D++I I+L+GNK
Sbjct: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMLVGNK 127
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
+DL +RAVS +DA FAE + FF E SAL NVD AF +L +IY VSKK LE G+
Sbjct: 128 ADLRHLRAVSTDDAKGFAERENTFFMETSALESLNVDNAFTEVLTQIYRVVSKKTLEIGD 187
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLSTCSC 237
D + G I+V G+ ++S +KK+ S
Sbjct: 188 ---DPAALPKGQTINV--GSKDDVSAVKKVGCYSA 217
>gi|351720917|ref|NP_001237704.1| uncharacterized protein LOC100305599 [Glycine max]
gi|255626033|gb|ACU13361.1| unknown [Glycine max]
Length = 218
Score = 241 bits (615), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 115/211 (54%), Positives = 157/211 (74%), Gaps = 1/211 (0%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
DY+FK+V+IGDS VGKS +LSRFT+NEF ++KSTIGVEF TR+V ++ K++KAQIWDTA
Sbjct: 8 DYLFKLVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRSVPVDSKLVKAQIWDTA 67
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQERYRA+TSAYYRGA+GA+VVYD+T+ +F++V RW++ELR H ++ + ++L+GNK+DL
Sbjct: 68 GQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWLKELRDHTEAYVVVMLVGNKADL 127
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNGKV 205
+RAVS E+A EFAE + ++F E SAL NVD AF +L +IY VS+K LE +
Sbjct: 128 RHLRAVSTEEATEFAEKESIYFMETSALESLNVDNAFIEVLTQIYNVVSRKTLETVDDDP 187
Query: 206 DGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
+ G I VI D ++S +KK CS
Sbjct: 188 STKALPKGETI-VIGTKDDDVSAVKKSGCCS 217
>gi|294460998|gb|ADE76069.1| unknown [Picea sitchensis]
Length = 214
Score = 241 bits (615), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 125/215 (58%), Positives = 157/215 (73%), Gaps = 6/215 (2%)
Query: 21 IPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQ 80
+ D+ D++FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TRT+ ++GK IKAQ
Sbjct: 5 VDDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTIQVDGKTIKAQ 64
Query: 81 IWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIG 140
IWDTAGQERYRA+TSAYYRGA+GA++VYDITK +FD+V RW+ ELR HADS+I I+L+G
Sbjct: 65 IWDTAGQERYRAITSAYYRGAVGALLVYDITKNATFDNVKRWLRELRDHADSNIVIMLVG 124
Query: 141 NKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELEC 200
NKSDL MRAV +DA +FAE +GL F E SAL NV+ +F +L EIY V +K L
Sbjct: 125 NKSDLSHMRAVPIDDAQDFAEKEGLSFMETSALESTNVEKSFQSILTEIYQIVKRKSLAA 184
Query: 201 GNGKVDGPPMLAGSKIDVISGADLEISEMKKLSTC 235
GP S+ I+ +D E + KK S C
Sbjct: 185 EEAASAGP-----SQGTPINASDAE-TIAKKRSCC 213
>gi|425771377|gb|EKV09822.1| GTP-binding protein yptV1 [Penicillium digitatum Pd1]
gi|425776994|gb|EKV15191.1| GTP-binding protein yptV1 [Penicillium digitatum PHI26]
Length = 209
Score = 241 bits (615), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 119/201 (59%), Positives = 154/201 (76%), Gaps = 3/201 (1%)
Query: 20 MIPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKA 79
M D+ D++FKVV+IGDS VGKS +LSRFT+NEF DSKSTIGVEF TR++ ++ K IKA
Sbjct: 1 MANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKA 60
Query: 80 QIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILI 139
QIWDTAGQERYRA+TSAYYRGA+GA++VYDI+K Q++++V RW++ELR HADS+I I+L+
Sbjct: 61 QIWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVNRWLKELRDHADSNIVIMLV 120
Query: 140 GNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELE 199
GNKSDL +RAV E+A +FA + L F E SAL+ NV+ AF +L EIY VS K L+
Sbjct: 121 GNKSDLRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALD 180
Query: 200 CGNGK---VDGPPMLAGSKID 217
G G +D P++ SK D
Sbjct: 181 NGEGGQQVLDRRPVIDPSKQD 201
>gi|255570960|ref|XP_002526431.1| protein with unknown function [Ricinus communis]
gi|223534211|gb|EEF35926.1| protein with unknown function [Ricinus communis]
Length = 215
Score = 241 bits (614), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 118/203 (58%), Positives = 155/203 (76%), Gaps = 4/203 (1%)
Query: 22 PDK-IDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQ 80
PD+ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TRT+ + G+ +KAQ
Sbjct: 5 PDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQ 64
Query: 81 IWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIG 140
IWDTAGQERYRA+TSAYYRGALGA++VYD+TK +F++V+RW++ELR HAD++I I+LIG
Sbjct: 65 IWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADANIVIMLIG 124
Query: 141 NKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELEC 200
NK+DL +RAV+ EDA +AE +GL F E SAL NV+ AF +L EIY +SKK L
Sbjct: 125 NKTDLKHLRAVATEDAQGYAEREGLSFIETSALEATNVEKAFQTILSEIYRIISKKSL-- 182
Query: 201 GNGKVDGPPMLAGSKIDVISGAD 223
+ P + K+ V+ G++
Sbjct: 183 -TSEEPAPANIKEGKMIVVGGSE 204
>gi|330923009|ref|XP_003300061.1| hypothetical protein PTT_11209 [Pyrenophora teres f. teres 0-1]
gi|311325975|gb|EFQ91841.1| hypothetical protein PTT_11209 [Pyrenophora teres f. teres 0-1]
gi|451845858|gb|EMD59169.1| hypothetical protein COCSADRAFT_164753 [Cochliobolus sativus
ND90Pr]
Length = 211
Score = 241 bits (614), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 122/207 (58%), Positives = 156/207 (75%), Gaps = 3/207 (1%)
Query: 20 MIPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKA 79
M D+ D++FKVV+IGDS VGKS +LSRFT+NEF DSKSTIGVEF TR++ ++ K IKA
Sbjct: 1 MANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDAKTIKA 60
Query: 80 QIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILI 139
QIWDTAGQERYRA+TSAYYRGA+GA++VYDI+K Q++++V RW++ELR HADS+I I+L+
Sbjct: 61 QIWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADSNIVIMLV 120
Query: 140 GNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELE 199
GNKSDL +RAV E+A +FA + L F E SAL+ NV+ AF +L EIY VS K L+
Sbjct: 121 GNKSDLRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALD 180
Query: 200 CGNGKVDGPPMLAGSKIDVIS-GADLE 225
G G GP + K+ IS AD E
Sbjct: 181 QGEGS--GPVLGNDRKVLEISKSADAE 205
>gi|212275882|ref|NP_001130075.1| uncharacterized protein LOC100191168 [Zea mays]
gi|194688226|gb|ACF78197.1| unknown [Zea mays]
gi|195643758|gb|ACG41347.1| ras-related protein Rab11A [Zea mays]
gi|413932580|gb|AFW67131.1| Ras protein Rab11A [Zea mays]
Length = 215
Score = 241 bits (614), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 117/198 (59%), Positives = 150/198 (75%), Gaps = 1/198 (0%)
Query: 21 IPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQ 80
+ ++ DY+FK+V+IGDS VGKS ILSRFT+NEF +SKSTIGVEF TRT+ I GK IKAQ
Sbjct: 5 VDNEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQIEGKTIKAQ 64
Query: 81 IWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIG 140
IWDTAGQERYRA+TSAYYRGA+GA++VYDITK+Q+F+++ RW+ ELR HADS+I I+++G
Sbjct: 65 IWDTAGQERYRAITSAYYRGAVGALLVYDITKKQTFENIQRWLRELRDHADSNIVIMMVG 124
Query: 141 NKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELEC 200
NKSDL +R+V ED AE +GL F E SAL NV+ AF +L +I+ +SKK L
Sbjct: 125 NKSDLNHLRSVPEEDGQALAEKEGLSFLETSALEALNVEKAFQTVLSDIHQIISKKALAA 184
Query: 201 GNGKVDGPPMLAGSKIDV 218
GPP G+ I+V
Sbjct: 185 QEAAGSGPPG-QGTTINV 201
>gi|357121701|ref|XP_003562556.1| PREDICTED: ras-related protein RABA2a-like [Brachypodium
distachyon]
Length = 221
Score = 241 bits (614), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 120/186 (64%), Positives = 146/186 (78%), Gaps = 3/186 (1%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FK+V+IGDS VGKS +LSRFTKN F DSKSTIGVEF TRT+ + GK IKAQIW
Sbjct: 13 DEYDYLFKIVLIGDSGVGKSNLLSRFTKNTFSLDSKSTIGVEFATRTIEVEGKTIKAQIW 72
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYD+TK +FD+V RW++ELR HADS+I I+LIGNK
Sbjct: 73 DTAGQERYRAITSAYYRGAVGALLVYDVTKGATFDNVKRWLKELRDHADSNIVIMLIGNK 132
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL---E 199
DL +R+V+ EDA FAE +GL F E SAL+ NVD AF +L EIY +SKK L +
Sbjct: 133 MDLKHLRSVAQEDAASFAEREGLSFIETSALDATNVDRAFQTVLGEIYRIISKKALSTDD 192
Query: 200 CGNGKV 205
G G V
Sbjct: 193 SGAGAV 198
>gi|356551598|ref|XP_003544161.1| PREDICTED: ras-related protein Rab2BV-like [Glycine max]
Length = 216
Score = 241 bits (614), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 122/199 (61%), Positives = 149/199 (74%), Gaps = 3/199 (1%)
Query: 21 IPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQ 80
+ + DY+FKVV+IGDS VGKS ILSRFT+NEF +SKSTIGVEF TRT+ + GK +KAQ
Sbjct: 5 VDHEYDYLFKVVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQ 64
Query: 81 IWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIG 140
IWDTAGQERYRA+TSAYYRGA+GA++VYDITKRQ+FD+V RW+ ELR HADS+I I++ G
Sbjct: 65 IWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAG 124
Query: 141 NKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELEC 200
NKSDL +RAVS EDA AE +GL F E SAL NV+ AF +L +IY +SKK L
Sbjct: 125 NKSDLNHLRAVSTEDAQSLAEREGLSFLETSALEAYNVEKAFQTILFDIYHIISKKALAA 184
Query: 201 GNGKVD-GPPMLAGSKIDV 218
G P G+ I+V
Sbjct: 185 QEANSSTGLPQ--GTTINV 201
>gi|225461703|ref|XP_002285495.1| PREDICTED: ras-related protein Rab11D isoform 1 [Vitis vinifera]
gi|147834751|emb|CAN75016.1| hypothetical protein VITISV_035368 [Vitis vinifera]
Length = 218
Score = 241 bits (614), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 119/214 (55%), Positives = 156/214 (72%), Gaps = 4/214 (1%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D DY+FKVV+IGDS VGKS +LSRFTKNEF +SKSTIGVEF TRT+ ++GK+IKAQIW
Sbjct: 8 DDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGKVIKAQIW 67
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYD+T+ +F++V RW++ELR H D +I ++L+GNK
Sbjct: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELRNHTDPNIVVMLVGNK 127
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
SDL + AVS ED +AE + L+F E SAL NV+ AF +L +IY VSKK +E G+
Sbjct: 128 SDLRHLVAVSTEDGKTYAERESLYFMETSALEATNVENAFAEVLTQIYRIVSKKSVEGGD 187
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
G +I+V A S +K++ CS
Sbjct: 188 EGAASSVPAKGERINVKDDA----SALKRVGCCS 217
>gi|384490318|gb|EIE81540.1| small GTPase [Rhizopus delemar RA 99-880]
Length = 211
Score = 241 bits (614), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 119/196 (60%), Positives = 151/196 (77%), Gaps = 3/196 (1%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGK+ +LSRFT+NEF +SKSTIGVEF TR+V ++ K +KAQIW
Sbjct: 5 DEYDYLFKVVLIGDSGVGKTNLLSRFTRNEFNLESKSTIGVEFATRSVQVDNKTVKAQIW 64
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI K Q++++V RW++ELR HADS+I ++L+GNK
Sbjct: 65 DTAGQERYRAITSAYYRGAVGALLVYDIAKYQTYENVMRWLKELRDHADSNIVVMLVGNK 124
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
SDL +RAV E+A +FA D GL F E SAL+ NV+ AF R+L EIY VS K LE N
Sbjct: 125 SDLRHLRAVPTEEAKQFAADNGLSFIETSALDSSNVELAFQRILTEIYRIVSNKALESSN 184
Query: 203 GKVDGPPMLAGSKIDV 218
D AG I+V
Sbjct: 185 ---DVIRPTAGQTINV 197
>gi|242048154|ref|XP_002461823.1| hypothetical protein SORBIDRAFT_02g008790 [Sorghum bicolor]
gi|241925200|gb|EER98344.1| hypothetical protein SORBIDRAFT_02g008790 [Sorghum bicolor]
Length = 223
Score = 241 bits (614), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 115/176 (65%), Positives = 143/176 (81%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGKS +LSRFTKN F DSKSTIGVEF TRT+ ++ K IKAQIW
Sbjct: 13 DEYDYLFKVVLIGDSGVGKSNLLSRFTKNTFALDSKSTIGVEFATRTIQVDTKTIKAQIW 72
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYD+TK +F++V RW++ELR HADS+I ++LIGNK
Sbjct: 73 DTAGQERYRAITSAYYRGAVGALLVYDVTKVMTFENVKRWLKELRDHADSNIVVMLIGNK 132
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL 198
DL +R+V+ EDA FAE +GLFF E SAL+ NV+ AF +L EIY +SKK L
Sbjct: 133 IDLRHLRSVAVEDAASFAESEGLFFIETSALDATNVEKAFQTVLAEIYRIISKKPL 188
>gi|224086271|ref|XP_002307838.1| predicted protein [Populus trichocarpa]
gi|222853814|gb|EEE91361.1| predicted protein [Populus trichocarpa]
Length = 216
Score = 241 bits (614), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 117/198 (59%), Positives = 146/198 (73%)
Query: 21 IPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQ 80
+ + DY+FK+V+IGDS VGKS ILSRFT+NEF +SKSTIGVEF TRT+ ++GK +KAQ
Sbjct: 5 VDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVDGKTVKAQ 64
Query: 81 IWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIG 140
IWDTAGQERYRA+TSAYYRGA+GA +VYDITKRQ+FD+V RW+ ELR HADS+I I++ G
Sbjct: 65 IWDTAGQERYRAITSAYYRGAVGAFLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAG 124
Query: 141 NKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELEC 200
NKSDL +RAV ED AE +GL F E SAL N++ AF +L EIY +SKK L
Sbjct: 125 NKSDLNHLRAVQEEDGHALAEKEGLSFLETSALEATNIEKAFQTILTEIYHIISKKTLAA 184
Query: 201 GNGKVDGPPMLAGSKIDV 218
+ G+ I+V
Sbjct: 185 QEAAANSTVPGQGTTINV 202
>gi|406863148|gb|EKD16196.1| Ras GTPase [Marssonina brunnea f. sp. 'multigermtubi' MB_m1]
Length = 212
Score = 241 bits (614), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 119/204 (58%), Positives = 156/204 (76%), Gaps = 2/204 (0%)
Query: 20 MIPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKA 79
M D+ D++FKVV+IGDS VGKS +LSRFT+NEF DSKSTIGVEF TR++ ++ K IKA
Sbjct: 1 MANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDAKTIKA 60
Query: 80 QIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILI 139
QIWDTAGQERYRA+TSAYYRGA+GA++VYDI+K Q++++V RW++ELR HADS+I I+L+
Sbjct: 61 QIWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADSNIVIMLV 120
Query: 140 GNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELE 199
GNKSDL +RAV E+A +FA + L F E SAL+ NV+ AF +L EIY VS+K L+
Sbjct: 121 GNKSDLRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSQKALD 180
Query: 200 CGNGKVDGPPMLAGSKIDVISGAD 223
NG+ + AG+ I + AD
Sbjct: 181 --NGESAQANIGAGTNISLSKPAD 202
>gi|226509624|ref|NP_001151123.1| ras-related protein Rab11B [Zea mays]
gi|195644454|gb|ACG41695.1| ras-related protein Rab11B [Zea mays]
gi|223972799|gb|ACN30587.1| unknown [Zea mays]
gi|413946523|gb|AFW79172.1| Ras protein Rab11B [Zea mays]
Length = 216
Score = 241 bits (614), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 121/214 (56%), Positives = 157/214 (73%), Gaps = 5/214 (2%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ + K++KAQIW
Sbjct: 7 DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVEDKVVKAQIW 66
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA+VVYD+T+ +F++V RW+ ELR H D++I ++L+GNK
Sbjct: 67 DTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWMRELRDHTDANIVMMLVGNK 126
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
+DL +RAV EDA FAE Q FF E SAL NV+ AF +L +IY VSKK L+ G+
Sbjct: 127 ADLRHLRAVPTEDAKAFAERQNAFFMETSALEAMNVEDAFTEVLAQIYRVVSKKALDIGD 186
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
PP G I+V G ++S +KK + CS
Sbjct: 187 DPA-APPR--GHTINV--GGKDDVSAVKKSACCS 215
>gi|226502406|ref|NP_001146923.1| LOC100280532 [Zea mays]
gi|195605270|gb|ACG24465.1| ras-related protein Rab11C [Zea mays]
Length = 216
Score = 240 bits (613), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 120/216 (55%), Positives = 154/216 (71%), Gaps = 5/216 (2%)
Query: 21 IPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQ 80
+ ++ DY+FK+V+IGDS VGKS I SRFT+NEF +SKSTIGVEF TR + I+GK +KAQ
Sbjct: 5 VNNEYDYLFKIVLIGDSGVGKSNIPSRFTRNEFCLESKSTIGVEFATRNLQIDGKTVKAQ 64
Query: 81 IWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIG 140
IWDTAGQERYRA+TSAYYRGA+GA++VYDITK+QSFD V RW+ ELR HAD++I ++++G
Sbjct: 65 IWDTAGQERYRAITSAYYRGAVGALLVYDITKKQSFDSVQRWLRELRGHADANIVVMMVG 124
Query: 141 NKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELEC 200
NKSDL +R+V ED F+E +GL F E SAL NV+ AF +L EI+ VSKK L
Sbjct: 125 NKSDLNHLRSVPEEDGRAFSEKEGLSFLETSALEAINVEKAFHTILSEIHQTVSKKALAA 184
Query: 201 GNGKVDGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
+ G+ I+V E S + K S CS
Sbjct: 185 QASASTNGRSMQGTTINVA-----ESSTVTKGSCCS 215
>gi|428174833|gb|EKX43726.1| hypothetical protein GUITHDRAFT_159767 [Guillardia theta CCMP2712]
Length = 218
Score = 240 bits (613), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 120/215 (55%), Positives = 159/215 (73%), Gaps = 1/215 (0%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIW
Sbjct: 5 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIW 64
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI K +F++V RW++ELR HAD +I I+L+GNK
Sbjct: 65 DTAGQERYRAITSAYYRGAVGALLVYDIAKHVTFENVDRWLKELRDHADHNIVIMLVGNK 124
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
SDL +RAV+ +DA +AE + L F E SAL+ NV+ AF +L EIY VS++ +E G
Sbjct: 125 SDLRHLRAVATDDARGYAEQRNLSFIETSALDSTNVEQAFQTILTEIYRLVSRRPMEAGE 184
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLSTCSC 237
D P + G K+ V + + +E K + SC
Sbjct: 185 SG-DSPSVGQGEKVIVSREDETKAAERKSKCSGSC 218
>gi|334261585|gb|AEG74033.1| Rab protein [Pellia endiviifolia (species B)]
Length = 217
Score = 240 bits (613), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 117/215 (54%), Positives = 158/215 (73%), Gaps = 4/215 (1%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++ K+IKAQIW
Sbjct: 7 DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSINVDSKLIKAQIW 66
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDIT+ +F++V RW++EL+ H DS+I ++L+GNK
Sbjct: 67 DTAGQERYRAITSAYYRGAVGALLVYDITRHVTFENVERWLKELKDHTDSNIVVMLVGNK 126
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
S L +RAVSA+D F+E +GLFF E SAL NV+ AF ++ +IY VSKK L+ G
Sbjct: 127 SVLRHLRAVSADDGQSFSEKEGLFFMETSALESTNVENAFKQIPTQIYRVVSKKALDVG- 185
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLSTCSC 237
+ P + G + G +++ KK+ CS
Sbjct: 186 ---EDPSAVPGKGQTISVGNKDDVTATKKVGCCSA 217
>gi|255558942|ref|XP_002520494.1| protein with unknown function [Ricinus communis]
gi|223540336|gb|EEF41907.1| protein with unknown function [Ricinus communis]
Length = 216
Score = 240 bits (613), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 125/220 (56%), Positives = 156/220 (70%), Gaps = 13/220 (5%)
Query: 21 IPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQ 80
+ + DY+FK+V+IGDS VGKS ILSRFT+NEF +SKSTIGVEF TRT+ ++GK +KAQ
Sbjct: 5 VDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVDGKTVKAQ 64
Query: 81 IWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIG 140
IWDTAGQERYRA+TSAYYRGA+GA++VYDITKRQ+FD+V RW+ ELR HADS+I I++ G
Sbjct: 65 IWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVILMAG 124
Query: 141 NKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL-- 198
NKSDL +RAV+ ED AE + L F E SAL NV+ AF +L EIY +SKK L
Sbjct: 125 NKSDLNHLRAVAEEDGQALAERESLSFLETSALEATNVEKAFQTILTEIYHIISKKALAA 184
Query: 199 --ECGNGKVDGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
GN + G G+ I+V + S K S CS
Sbjct: 185 QEAAGNSTLPGQ----GTTINVA-----DTSGNTKRSCCS 215
>gi|31324876|gb|AAP48704.1| rab11-2 [Limulus polyphemus]
Length = 217
Score = 240 bits (613), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 118/213 (55%), Positives = 157/213 (73%), Gaps = 3/213 (1%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIW
Sbjct: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI K ++++V RW++ELR HAD +I I+L+GNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADQNIVIMLVGNK 125
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
SDL +RAV ++A FAE L F E SAL+ NV++AF ++L EIY VS+K++
Sbjct: 126 SDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVESAFQQILTEIYRIVSQKQIR--- 182
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLSTC 235
D P +G + IS A + S+ +K C
Sbjct: 183 NDTDNDPSPSGDNVKPISIAPTDSSDTRKKQCC 215
>gi|297849266|ref|XP_002892514.1| hypothetical protein ARALYDRAFT_888208 [Arabidopsis lyrata subsp.
lyrata]
gi|297338356|gb|EFH68773.1| hypothetical protein ARALYDRAFT_888208 [Arabidopsis lyrata subsp.
lyrata]
Length = 217
Score = 240 bits (613), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 118/203 (58%), Positives = 154/203 (75%), Gaps = 2/203 (0%)
Query: 22 PDK-IDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQ 80
PD+ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TRT+ + G+ +KAQ
Sbjct: 5 PDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQ 64
Query: 81 IWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIG 140
IWDTAGQERYRA+TSAYYRGALGA++VYD+TK +F++V+RW++ELR HADS+I I+LIG
Sbjct: 65 IWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMLIG 124
Query: 141 NKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELEC 200
NK+DL +RAV+ EDA +AE +GL F E SAL NV+ AF +L EIY +SKK +
Sbjct: 125 NKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEALNVEKAFQTILSEIYRIISKKSISS 184
Query: 201 GNGKVDGPPMLAGSKIDVISGAD 223
+ + G IDV + ++
Sbjct: 185 DQTTANA-SIKEGQTIDVAATSE 206
>gi|356542139|ref|XP_003539528.1| PREDICTED: ras-related protein Rab11C-like isoform 1 [Glycine max]
gi|356542141|ref|XP_003539529.1| PREDICTED: ras-related protein Rab11C-like isoform 2 [Glycine max]
Length = 216
Score = 240 bits (613), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 119/198 (60%), Positives = 147/198 (74%)
Query: 21 IPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQ 80
+ + DY+FK+V+IGDS VGKS ILSRFT+NEF +SKSTIGVEF TRT+ + GK +KAQ
Sbjct: 5 VDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQ 64
Query: 81 IWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIG 140
IWDTAGQERYRA+TSAYYRGA+GA++VYDITKRQ+FD+V RW+ ELR HADS+I I++ G
Sbjct: 65 IWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAG 124
Query: 141 NKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELEC 200
NKSDL +RAVS +D AE +GL F E SAL N++ AF +L EIY VSKK L
Sbjct: 125 NKSDLSHLRAVSEDDGQALAEREGLSFLETSALEATNIEKAFQTILTEIYHIVSKKALAA 184
Query: 201 GNGKVDGPPMLAGSKIDV 218
V G+ I+V
Sbjct: 185 QEAAVGTILPGQGTTINV 202
>gi|388491774|gb|AFK33953.1| unknown [Medicago truncatula]
Length = 215
Score = 240 bits (613), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 115/178 (64%), Positives = 141/178 (79%)
Query: 21 IPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQ 80
+ + DY+FK+V+IGDS VGKS ILSRFT+NEF +SKSTIGVEF TRT+ + GK +KAQ
Sbjct: 5 VDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQ 64
Query: 81 IWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIG 140
IWDTAGQERYRA+TSAYYRGA+GA++VYDITKRQ+FD+V RW+ ELR HADS+I I++ G
Sbjct: 65 IWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVNRWLRELRDHADSNIVIMMAG 124
Query: 141 NKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL 198
NKSDL +RAVS +D AE +GL F E SAL N++ AF +L EIY VSKK L
Sbjct: 125 NKSDLNHLRAVSEDDGQALAEKEGLSFLETSALEATNIEKAFQTILTEIYHIVSKKAL 182
>gi|297830058|ref|XP_002882911.1| hypothetical protein ARALYDRAFT_478935 [Arabidopsis lyrata subsp.
lyrata]
gi|297328751|gb|EFH59170.1| hypothetical protein ARALYDRAFT_478935 [Arabidopsis lyrata subsp.
lyrata]
Length = 217
Score = 240 bits (613), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 120/215 (55%), Positives = 161/215 (74%), Gaps = 7/215 (3%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D D+++KVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++ KI+KAQIW
Sbjct: 8 DDYDFLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDEKIVKAQIW 67
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYD+T+ +F++V RW++ELR H +++I I+L+GNK
Sbjct: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTEANIVIMLVGNK 127
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
+DL +RAVS EDA FAE + FF E SAL NV+ AF +L +IY SKK L+ G
Sbjct: 128 ADLRHLRAVSTEDAKAFAERENTFFMETSALEALNVENAFTEVLSQIYRVASKKALDIG- 186
Query: 203 GKVDGPPMLA-GSKIDVISGADLEISEMKKLSTCS 236
D P L G I+V G+ ++SE+KK+ CS
Sbjct: 187 ---DDPATLPKGQSINV--GSKDDVSEVKKVGCCS 216
>gi|226492597|ref|NP_001140635.1| uncharacterized protein LOC100272710 [Zea mays]
gi|194700274|gb|ACF84221.1| unknown [Zea mays]
Length = 216
Score = 240 bits (612), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 121/214 (56%), Positives = 157/214 (73%), Gaps = 5/214 (2%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++ K++KAQIW
Sbjct: 7 DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVVKAQIW 66
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA+VVYD+T+ +F++V RW+ ELR H D++I I+L+GNK
Sbjct: 67 DTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWMRELRDHTDANIVIMLVGNK 126
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
+DL +RAV EDA FAE + FF E SAL NV+ AF +L +IY VSKK L+ G+
Sbjct: 127 ADLRHLRAVPTEDAKAFAERENAFFMETSALEAMNVEGAFTEVLTQIYHVVSKKALDIGD 186
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
PP G I V G ++S +KK + CS
Sbjct: 187 DPA-APPR--GQTISV--GGKDDVSAVKKSACCS 215
>gi|15232477|ref|NP_188124.1| RAB GTPase-like protein A1G [Arabidopsis thaliana]
gi|75273740|sp|Q9LK99.1|RAA1G_ARATH RecName: Full=Ras-related protein RABA1g; Short=AtRABA1g
gi|8777489|dbj|BAA97069.1| GTP-binding protein-like [Arabidopsis thaliana]
gi|26452472|dbj|BAC43321.1| putative ras-related GTP-binding protein [Arabidopsis thaliana]
gi|28973321|gb|AAO63985.1| putative Ras family GTP-binding protein [Arabidopsis thaliana]
gi|332642090|gb|AEE75611.1| RAB GTPase-like protein A1G [Arabidopsis thaliana]
Length = 217
Score = 240 bits (612), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 118/214 (55%), Positives = 161/214 (75%), Gaps = 5/214 (2%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D D+++KVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++ KI+KAQIW
Sbjct: 8 DDYDFLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDEKIVKAQIW 67
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYD+T+ +F++V RW++ELR H +++I I+L+GNK
Sbjct: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTEANIVIMLVGNK 127
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
+DL +RAVS EDA FAE + FF E SAL NV+ AF +L +IY SKK L+ G+
Sbjct: 128 ADLRHLRAVSTEDAKAFAERENTFFMETSALEALNVENAFTEVLSQIYRVASKKALDIGD 187
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
D + G I+V G+ ++SE+KK+ CS
Sbjct: 188 ---DHTTLPKGQSINV--GSKDDVSEVKKVGCCS 216
>gi|219362849|ref|NP_001136551.1| uncharacterized protein LOC100216670 [Zea mays]
gi|194696142|gb|ACF82155.1| unknown [Zea mays]
gi|224033377|gb|ACN35764.1| unknown [Zea mays]
gi|414873681|tpg|DAA52238.1| TPA: hypothetical protein ZEAMMB73_597734 [Zea mays]
gi|414873682|tpg|DAA52239.1| TPA: hypothetical protein ZEAMMB73_597734 [Zea mays]
Length = 215
Score = 240 bits (612), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 113/187 (60%), Positives = 145/187 (77%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
++ DY+FK+V+IGDS VGKS ILSRFT+NEF +SKSTIGVEF TRT+ + GK IKAQIW
Sbjct: 7 NEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTIKAQIW 66
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDITK+Q+F+++ RW+ ELR HADS+I I+++GNK
Sbjct: 67 DTAGQERYRAITSAYYRGAVGALLVYDITKKQTFENIQRWLRELRDHADSNIVIMMVGNK 126
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
SDL +R+V+ ED AE +GL F E SAL NV+ AF +L +I+ +SKK L
Sbjct: 127 SDLNHLRSVAEEDGQALAEKEGLSFLETSALEALNVEKAFQTVLSDIHQIISKKALAAQE 186
Query: 203 GKVDGPP 209
GPP
Sbjct: 187 AAGSGPP 193
>gi|60460508|gb|AAX20384.1| small GTPase [Gracilariopsis lemaneiformis]
gi|65306620|gb|AAY41883.1| small GTPase Rab11 [Gracilaria lemaneiformis]
Length = 215
Score = 240 bits (612), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 116/184 (63%), Positives = 146/184 (79%)
Query: 25 IDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDT 84
+DY+FKVV+IGD+ VGKS +LSRFT+NEF +SKSTIGVEF TR++ GKIIKAQIWDT
Sbjct: 9 VDYLFKVVLIGDAGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIQCEGKIIKAQIWDT 68
Query: 85 AGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSD 144
AGQERYRA+TSAYYRGA+GA++VYDITK+ SFD+V RW++EL+ HAD++I I+L+GNKSD
Sbjct: 69 AGQERYRAITSAYYRGAVGALLVYDITKKDSFDNVQRWLKELKDHADANIVIMLVGNKSD 128
Query: 145 LVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNGK 204
L ++AV+ +DA FAE GL F E SAL+ NV+ AF +L EIY SKK LE G+
Sbjct: 129 LQHLKAVTTDDASAFAESNGLSFIETSALDNSNVEEAFRSILSEIYRLGSKKALEKGSTS 188
Query: 205 VDGP 208
P
Sbjct: 189 NFAP 192
>gi|357125866|ref|XP_003564610.1| PREDICTED: ras-related protein Rab11C-like [Brachypodium
distachyon]
Length = 216
Score = 240 bits (612), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 120/216 (55%), Positives = 156/216 (72%), Gaps = 5/216 (2%)
Query: 21 IPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQ 80
+ ++ DY+FK+V+IGDS VGKS ILSRFT+NEF +SKSTIGVEF TRT+ I+GK +KAQ
Sbjct: 5 VDNEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQIDGKTVKAQ 64
Query: 81 IWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIG 140
IWDTAGQERYRA+TSAYYRGA+GA++V+DITKRQ+FD+V RW+ ELR HAD++I ++++G
Sbjct: 65 IWDTAGQERYRAITSAYYRGAVGALLVFDITKRQTFDNVQRWLRELRDHADANIVVMMVG 124
Query: 141 NKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELEC 200
NKSDL +R+V ED+ F+E + L F E SAL NV+ AF +L EI+ VSKK L
Sbjct: 125 NKSDLNHLRSVPEEDSQAFSEKESLSFLETSALEAINVEKAFHTVLSEIHQIVSKKALAA 184
Query: 201 GNGKVDGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
+ G+ I+V E S K S CS
Sbjct: 185 QESASANGRSMQGTTINVA-----EPSTNTKGSCCS 215
>gi|326489989|dbj|BAJ94068.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 216
Score = 240 bits (612), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 120/214 (56%), Positives = 160/214 (74%), Gaps = 5/214 (2%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D DY+FKVV+IGDS VGKS +L+RFT+NEF +SKSTIGVEF TR++ ++ K++KAQIW
Sbjct: 7 DDYDYLFKVVLIGDSGVGKSNLLTRFTRNEFSLESKSTIGVEFATRSIRVDDKVVKAQIW 66
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA+VVYD+T+ +F++V RW++EL+ H D++I I+L+GNK
Sbjct: 67 DTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWLKELKDHTDANIVIMLVGNK 126
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
+DL +RAVS EDA FAE + FF E SAL NV+ AF +L +IY VSKK L+ G+
Sbjct: 127 ADLRHLRAVSVEDAKAFAEREYTFFMETSALEAMNVEDAFTEVLTQIYRVVSKKALDIGD 186
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
PP G I+V G+ ++S +KK CS
Sbjct: 187 DPA-APPR--GQTINV--GSKDDVSAVKKAGCCS 215
>gi|255563016|ref|XP_002522512.1| protein with unknown function [Ricinus communis]
gi|223538203|gb|EEF39812.1| protein with unknown function [Ricinus communis]
Length = 217
Score = 240 bits (612), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 119/215 (55%), Positives = 160/215 (74%), Gaps = 7/215 (3%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++ K++KAQIW
Sbjct: 8 DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVVKAQIW 67
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYD+T+ +F++V RW++ELR H D++I I+L+GNK
Sbjct: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMLVGNK 127
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
+DL +RA++ EDA FA+ Q FF E SAL NV+ AF +L +IY VS+K L+ G
Sbjct: 128 ADLRHLRAITIEDATAFAQRQNTFFMETSALESMNVENAFTEVLTQIYRVVSRKALDIG- 186
Query: 203 GKVDGPPMLA-GSKIDVISGADLEISEMKKLSTCS 236
D P L G I+V G+ ++S +KK CS
Sbjct: 187 ---DDPAALPRGQTINV--GSRDDVSAVKKAGCCS 216
>gi|255647659|gb|ACU24291.1| unknown [Glycine max]
Length = 216
Score = 239 bits (611), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 118/198 (59%), Positives = 146/198 (73%)
Query: 21 IPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQ 80
+ + DY+FK+V+ GDS VGKS ILSRFT+NEF +SKSTIGVEF TRT+ + GK +KAQ
Sbjct: 5 VDHEYDYLFKIVLTGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQ 64
Query: 81 IWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIG 140
IWDTAGQERYRA+TSAYYRGA+GA++VYDITKRQ+FD+V RW+ ELR HADS+I I++ G
Sbjct: 65 IWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAG 124
Query: 141 NKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELEC 200
NKSDL +RAVS +D AE +GL F E SAL N++ AF +L EIY VSKK L
Sbjct: 125 NKSDLSHLRAVSEDDGQALAEREGLSFLETSALEATNIEKAFQTILTEIYHIVSKKALAA 184
Query: 201 GNGKVDGPPMLAGSKIDV 218
V G+ I+V
Sbjct: 185 QEAAVGTTLPGQGTTINV 202
>gi|15222396|ref|NP_172221.1| RAB GTPase homolog A2B [Arabidopsis thaliana]
gi|297843530|ref|XP_002889646.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|332320580|sp|Q9LNW1.2|RAA2B_ARATH RecName: Full=Ras-related protein RABA2b; Short=AtRABA2b
gi|297335488|gb|EFH65905.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|332190000|gb|AEE28121.1| RAB GTPase homolog A2B [Arabidopsis thaliana]
Length = 214
Score = 239 bits (611), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 117/200 (58%), Positives = 149/200 (74%), Gaps = 2/200 (1%)
Query: 19 NMIPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIK 78
N I + DY+FK+V+IGDS VGKS ILSRFT+NEF +SKSTIGVEF TRT+ + GK +K
Sbjct: 3 NRIDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVK 62
Query: 79 AQIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIIL 138
AQIWDTAGQERYRA+TSAYYRGA+GA++VYDITKRQ+F++V RW+ ELR HADS+I I++
Sbjct: 63 AQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFENVLRWLRELRDHADSNIVIMM 122
Query: 139 IGNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL 198
GNKSDL +R+V+ ED AE +GL F E SAL N++ AF +L EIY +SKK L
Sbjct: 123 AGNKSDLNHLRSVADEDGRSLAEKEGLSFLETSALEATNIEKAFQTILSEIYHIISKKAL 182
Query: 199 ECGNGKVDGPPMLAGSKIDV 218
+ P G+ I++
Sbjct: 183 AAQEAAGNLPGQ--GTAINI 200
>gi|396477566|ref|XP_003840300.1| similar to ras-related protein Rab-11B [Leptosphaeria maculans JN3]
gi|312216872|emb|CBX96821.1| similar to ras-related protein Rab-11B [Leptosphaeria maculans JN3]
Length = 211
Score = 239 bits (611), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 119/208 (57%), Positives = 156/208 (75%), Gaps = 5/208 (2%)
Query: 20 MIPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKA 79
M D+ D++FKVV+IGDS VGKS +LSRFT+NEF DSKSTIGVEF TR++ ++ K IKA
Sbjct: 1 MANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDAKTIKA 60
Query: 80 QIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILI 139
QIWDTAGQERYRA+TSAYYRGA+GA++VYDI+K Q++++V RW++ELR HADS+I I+L+
Sbjct: 61 QIWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADSNIVIMLV 120
Query: 140 GNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELE 199
GNKSDL +RAV E+A +FA + L F E SAL+ NV+ AF +L EIY VS K L+
Sbjct: 121 GNKSDLRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALD 180
Query: 200 CGNGKVDGPPMLAGSK--IDVISGADLE 225
G G +L G + +++ AD E
Sbjct: 181 QGEG---SQNVLGGERKVLEISKSADAE 205
>gi|242091375|ref|XP_002441520.1| hypothetical protein SORBIDRAFT_09g028560 [Sorghum bicolor]
gi|241946805|gb|EES19950.1| hypothetical protein SORBIDRAFT_09g028560 [Sorghum bicolor]
Length = 216
Score = 239 bits (611), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 120/214 (56%), Positives = 158/214 (73%), Gaps = 5/214 (2%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++ K++KAQIW
Sbjct: 7 DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVVKAQIW 66
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA+VVYD+T+ +F++V RW+ EL+ H D++I I+L+GNK
Sbjct: 67 DTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWMRELKDHTDANIVIMLVGNK 126
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
+DL +RAV EDA FAE + FF E SAL NV+ AF +L +IY VSKK L+ G+
Sbjct: 127 ADLRHLRAVPTEDAKAFAERENAFFMETSALEAMNVEDAFTEVLTQIYRVVSKKALDIGD 186
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
PP G I+V G ++S +KK + CS
Sbjct: 187 DPA-APP--KGQTINV--GGKDDVSAVKKSACCS 215
>gi|51243763|gb|AAT99574.1| rab GTP-binding protein [Triticum aestivum]
Length = 216
Score = 239 bits (611), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 120/214 (56%), Positives = 160/214 (74%), Gaps = 5/214 (2%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D DY+FKVV+IGDS VGKS +L+RFT+NEF +SKSTIGVEF TR++ ++ K++KAQIW
Sbjct: 7 DDYDYLFKVVLIGDSGVGKSNLLTRFTRNEFSLESKSTIGVEFATRSIRVDDKVVKAQIW 66
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA+VVYD+T+ +F++V RW++EL+ H D++I I+L+GNK
Sbjct: 67 DTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWLKELKDHTDANIVIMLVGNK 126
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
+DL +RAVS EDA FAE + FF E SAL NV+ AF +L +IY VSKK L+ G+
Sbjct: 127 ADLRHLRAVSVEDAKAFAEREYTFFMETSALESMNVEDAFTEVLTQIYRVVSKKALDIGD 186
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
PP G I+V G+ ++S +KK CS
Sbjct: 187 DPA-APPR--GQTINV--GSKDDVSAVKKAGCCS 215
>gi|384500794|gb|EIE91285.1| GTPase [Rhizopus delemar RA 99-880]
Length = 211
Score = 239 bits (611), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 118/196 (60%), Positives = 151/196 (77%), Gaps = 3/196 (1%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGK+ +LSRFT+NEF +SKSTIGVEF TR+V ++ K +K+QIW
Sbjct: 5 DEYDYLFKVVLIGDSGVGKTNLLSRFTRNEFNLESKSTIGVEFATRSVQVDNKTVKSQIW 64
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI K Q++++V RW++ELR HADS+I ++L+GNK
Sbjct: 65 DTAGQERYRAITSAYYRGAVGALLVYDIAKYQTYENVMRWLKELRDHADSNIVVMLVGNK 124
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
SDL +RAV E+A +FA D GL F E SAL+ NV+ AF R+L EIY VS K LE N
Sbjct: 125 SDLRHLRAVPTEEAKQFAADNGLSFIETSALDSSNVELAFQRILTEIYRIVSNKALESSN 184
Query: 203 GKVDGPPMLAGSKIDV 218
D AG I+V
Sbjct: 185 ---DVIRPTAGQTINV 197
>gi|115456519|ref|NP_001051860.1| Os03g0843100 [Oryza sativa Japonica Group]
gi|41469625|gb|AAS07348.1| putative GTP-binding protein [Oryza sativa Japonica Group]
gi|108712033|gb|ABF99828.1| Ras-related protein Rab11C, putative, expressed [Oryza sativa
Japonica Group]
gi|113550331|dbj|BAF13774.1| Os03g0843100 [Oryza sativa Japonica Group]
gi|215737493|dbj|BAG96623.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737626|dbj|BAG96756.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767052|dbj|BAG99280.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218194080|gb|EEC76507.1| hypothetical protein OsI_14277 [Oryza sativa Indica Group]
gi|222626146|gb|EEE60278.1| hypothetical protein OsJ_13326 [Oryza sativa Japonica Group]
Length = 223
Score = 239 bits (611), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 114/174 (65%), Positives = 142/174 (81%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FK+V+IGDS VGKS +LSRFT+N F DSKSTIGVEF TRT+ + GKI+KAQIW
Sbjct: 13 DEYDYLFKIVLIGDSGVGKSNLLSRFTRNSFSLDSKSTIGVEFATRTIQVEGKIVKAQIW 72
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYD+TK +F++V RW++ELR HADS+I ++LIGNK
Sbjct: 73 DTAGQERYRAITSAYYRGAVGALLVYDVTKATTFENVKRWLKELRDHADSNIVVMLIGNK 132
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKK 196
DL +R+VS EDA FAE +GL F E SAL+ NVD AF +L EIY +SKK
Sbjct: 133 IDLKHLRSVSLEDATSFAEREGLSFVETSALDATNVDKAFQTVLTEIYRIISKK 186
>gi|15217568|ref|NP_172434.1| Ras-related protein RABA2a [Arabidopsis thaliana]
gi|3024516|sp|O04486.1|RAA2A_ARATH RecName: Full=Ras-related protein RABA2a; Short=AtRABA2a; AltName:
Full=Ras-related protein Rab11C; Short=AtRab11C; Flags:
Precursor
gi|2160157|gb|AAB60720.1| Strong similarity to A. thaliana ara-2 (gb|ATHARA2). ESTs
gb|ATTS2483,gb|ATTS2484,gb|AA042159 come from this gene
[Arabidopsis thaliana]
gi|2231303|gb|AAB61994.1| ras-related small GTPase [Arabidopsis thaliana]
gi|15010638|gb|AAK73978.1| At1g09630/F21M12_2 [Arabidopsis thaliana]
gi|21553810|gb|AAM62903.1| putative RAS-related protein RAB11C [Arabidopsis thaliana]
gi|22137284|gb|AAM91487.1| At1g09630/F21M12_2 [Arabidopsis thaliana]
gi|332190350|gb|AEE28471.1| Ras-related protein RABA2a [Arabidopsis thaliana]
Length = 217
Score = 239 bits (611), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 113/178 (63%), Positives = 145/178 (81%), Gaps = 1/178 (0%)
Query: 22 PDK-IDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQ 80
PD+ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TRT+ + G+ +KAQ
Sbjct: 5 PDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQ 64
Query: 81 IWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIG 140
IWDTAGQERYRA+TSAYYRGALGA++VYD+TK +F++V+RW++ELR HADS+I I+LIG
Sbjct: 65 IWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMLIG 124
Query: 141 NKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL 198
NK+DL +RAV+ EDA +AE +GL F E SAL NV+ AF +L E+Y +SKK +
Sbjct: 125 NKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEALNVEKAFQTILSEVYRIISKKSI 182
>gi|357132552|ref|XP_003567893.1| PREDICTED: ras-related protein RABA1f-like [Brachypodium
distachyon]
Length = 216
Score = 239 bits (611), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 119/214 (55%), Positives = 159/214 (74%), Gaps = 5/214 (2%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D DY+FKVV+IGDS VGKS +L+RFT+NEF +SKSTIGVEF TR++ ++ K++KAQIW
Sbjct: 7 DDYDYLFKVVLIGDSGVGKSNLLTRFTRNEFSLESKSTIGVEFATRSIHVDDKVVKAQIW 66
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA+VVYD+T+ +F++V RW+ EL+ H D++I I+L+GNK
Sbjct: 67 DTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWLRELKDHTDANIVIMLVGNK 126
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
+DL +RAV +EDA FAE + FF E SAL NV+ AF +L +IY VSKK L+ G+
Sbjct: 127 ADLRHLRAVQSEDAKAFAERENTFFMETSALEAMNVEDAFTEVLSQIYRVVSKKALDIGD 186
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
PP G I V G+ ++S +KK + CS
Sbjct: 187 DPA-APP--KGKTISV--GSKDDVSAVKKSACCS 215
>gi|225446511|ref|XP_002278749.1| PREDICTED: ras-related protein Rab11B [Vitis vinifera]
gi|147844837|emb|CAN83336.1| hypothetical protein VITISV_029113 [Vitis vinifera]
Length = 216
Score = 239 bits (611), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 122/215 (56%), Positives = 158/215 (73%), Gaps = 6/215 (2%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D DY+FKVV+IGDS VGKS +LSRFTKNEF +SKSTIGVEF TR++ ++ K++KAQIW
Sbjct: 8 DDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDEKVVKAQIW 67
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYD+T+ +F++V RW++ELR H DSSI I+L+GNK
Sbjct: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVDRWLKELRDHTDSSIVIMLVGNK 127
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
+DL +RAVS EDA +AE + FF E SAL NV+ AF +L +IY VS+K LE G+
Sbjct: 128 ADLGHLRAVSTEDAKAYAEKESTFFIETSALESTNVENAFTEVLTQIYHVVSRKALETGD 187
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLSTCSC 237
P G I+V G D ++S +K CS
Sbjct: 188 EAATVPK---GQTINV--GKD-DVSAIKIGGCCSA 216
>gi|358343344|ref|XP_003635764.1| Ras-related protein Rab11B [Medicago truncatula]
gi|355501699|gb|AES82902.1| Ras-related protein Rab11B [Medicago truncatula]
gi|388505920|gb|AFK41026.1| unknown [Medicago truncatula]
Length = 215
Score = 239 bits (610), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 119/216 (55%), Positives = 160/216 (74%), Gaps = 6/216 (2%)
Query: 21 IPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQ 80
+ ++ DY+FK+V+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR+V I K++KAQ
Sbjct: 4 VDEEYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSVRILDKLVKAQ 63
Query: 81 IWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIG 140
IWDTAGQERYRA+TSAYYRGA+GA++VYD T+ +F++V RW++ELR H D+ + I+L+G
Sbjct: 64 IWDTAGQERYRAITSAYYRGAVGALLVYDSTRHVTFENVERWLKELRDHTDAYVVIMLVG 123
Query: 141 NKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELEC 200
NK+DL ++AVS E+A FAE + ++F E SAL NVD AF +L +IY VSKK LE
Sbjct: 124 NKADLKHLQAVSTEEATTFAEKENIYFMETSALESLNVDNAFVEVLTQIYNVVSKKTLEK 183
Query: 201 GNGKVDGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
NG P G I++ G D ++S++KK CS
Sbjct: 184 ENGSASVPK---GETINI--GKD-DVSDVKKSGCCS 213
>gi|126645710|ref|XP_001388049.1| Rab11 [Cryptosporidium parvum Iowa II]
gi|126117137|gb|EAZ51237.1| Rab11, putative [Cryptosporidium parvum Iowa II]
Length = 220
Score = 239 bits (610), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 118/213 (55%), Positives = 156/213 (73%), Gaps = 4/213 (1%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
DY++K+V+IGDS VGKS +LSRFT++EF +SKSTIGVEF T+++ GK+IKAQIWDTA
Sbjct: 9 DYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESKSTIGVEFATKSIITEGKVIKAQIWDTA 68
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQERYRA+TSAYYRGA+GA++VYDI+KR SF++V RW++ELR HAD +I ++L+GNKSDL
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDISKRSSFENVERWLKELRDHADPNIVVLLVGNKSDL 128
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN--- 202
++R V+ E+A F+E +G+ EASALN NVD AF R+L EIY S+++L
Sbjct: 129 RNLRTVTQEEACAFSEREGMACMEASALNSSNVDEAFHRILSEIYTLRSERQLTANQHDL 188
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLSTC 235
K P G ++D I DL KK S C
Sbjct: 189 NKATLPLGTQGVRVDPIR-IDLNSKGSKKRSCC 220
>gi|357461039|ref|XP_003600801.1| Ras-related protein Rab11A [Medicago truncatula]
gi|355489849|gb|AES71052.1| Ras-related protein Rab11A [Medicago truncatula]
Length = 216
Score = 239 bits (610), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 123/220 (55%), Positives = 156/220 (70%), Gaps = 13/220 (5%)
Query: 21 IPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQ 80
+ ++ DY+FK+V+IGDS VGKS ILSRFT+NEF +SKSTIGVEF TRT+ + GK +KAQ
Sbjct: 5 VDNEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTIQVEGKTVKAQ 64
Query: 81 IWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIG 140
IWDTAGQERYRA+TSAYYRGA+GA++VYDITKRQ+F++V RW+ ELR HADS+I I+L G
Sbjct: 65 IWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFENVQRWLRELRDHADSNIVIMLAG 124
Query: 141 NKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELEC 200
NKSDL +RAVS++DA AE + L F E SAL NV+ AF +L +IY +SKK L
Sbjct: 125 NKSDLNHLRAVSSDDAQNLAEKETLSFLETSALEALNVEKAFQTILFDIYQIISKKAL-- 182
Query: 201 GNGKVDGPPMLAGSKIDVISGADLEISEM----KKLSTCS 236
+ S V G + +S M +K S CS
Sbjct: 183 -------AAQESASTTSVPHGTTINVSNMSGTVEKKSCCS 215
>gi|3024501|sp|Q40193.1|RB11C_LOTJA RecName: Full=Ras-related protein Rab11C
gi|1370146|emb|CAA98179.1| RAB11C [Lotus japonicus]
Length = 216
Score = 239 bits (610), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 117/198 (59%), Positives = 146/198 (73%)
Query: 21 IPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQ 80
+ + DY+FK+V+IGDS VGKS ILSRFT+NEF +SKSTIGVEF TRT+ + GK +KAQ
Sbjct: 5 VDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQ 64
Query: 81 IWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIG 140
IWDTAGQERYRA+TSAYYRGA+GA++VYDITKRQ+FD+V RW+ ELR HADS+I I++ G
Sbjct: 65 IWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAG 124
Query: 141 NKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELEC 200
NKSDL +RAVS +D +E +GL F E SAL N++ AF +L EIY VSKK L
Sbjct: 125 NKSDLNHLRAVSEDDGGALSEKEGLSFLETSALEATNIEKAFQTILTEIYHIVSKKALAA 184
Query: 201 GNGKVDGPPMLAGSKIDV 218
G+ I+V
Sbjct: 185 QEATAGASVPGQGTTINV 202
>gi|407917911|gb|EKG11211.1| Ras GTPase [Macrophomina phaseolina MS6]
Length = 212
Score = 239 bits (610), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 118/211 (55%), Positives = 156/211 (73%), Gaps = 1/211 (0%)
Query: 20 MIPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKA 79
M D+ D++FKVV+IGDS VGKS +LSRFT+NEF DSKSTIGVEF TR++ ++ K IKA
Sbjct: 1 MANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDAKTIKA 60
Query: 80 QIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILI 139
QIWDTAGQERYRA+TSAYYRGA+GA++VYDI+K Q++++V RW++ELR HADS+I I+L+
Sbjct: 61 QIWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADSNIVIMLV 120
Query: 140 GNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELE 199
GNKSDL +RAV E+A +FA + L F E SAL+ NV+ AF +L EIY VS+K L+
Sbjct: 121 GNKSDLRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSQKALD 180
Query: 200 CGNGKVDGPPMLAGSKIDVISGADLEISEMK 230
G P +++ + AD E + K
Sbjct: 181 QGES-AQNPIGGERRTLEITNSADTEAKQGK 210
>gi|322707693|gb|EFY99271.1| Ras GTPase Rab11, putative [Metarhizium anisopliae ARSEF 23]
Length = 212
Score = 239 bits (610), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 120/212 (56%), Positives = 158/212 (74%), Gaps = 2/212 (0%)
Query: 20 MIPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKA 79
M D+ D++FKVV+IGDS VGKS +LSRFT+NEF DSKSTIGVEF TR++ ++ K IKA
Sbjct: 1 MANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKA 60
Query: 80 QIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILI 139
QIWDTAGQERYRA+TSAYYRGA+GA++VYDI+K Q++++V RW++ELR HAD++I I+L+
Sbjct: 61 QIWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLV 120
Query: 140 GNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELE 199
GNKSDL +RAV E+A FA + L F E SAL+ NV+ AF +L EIY VS K L+
Sbjct: 121 GNKSDLRHLRAVPTEEAKSFASENHLSFIETSALDASNVELAFQNILTEIYRIVSSKALD 180
Query: 200 CGNGKVDGPPMLAGSKIDVISGADLEISEMKK 231
G+G + AG+ I + AD E ++ K
Sbjct: 181 SGDGA--QATIGAGTNISLSKPADDESAKSGK 210
>gi|358249314|ref|NP_001240030.1| uncharacterized protein LOC100797258 [Glycine max]
gi|255645100|gb|ACU23049.1| unknown [Glycine max]
Length = 217
Score = 239 bits (610), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 112/176 (63%), Positives = 144/176 (81%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
++ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TRT+ + G+ +KAQIW
Sbjct: 7 EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQIW 66
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGALGA++VYD+TK +F++V+RW++ELR HAD++I I+LIGNK
Sbjct: 67 DTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADANIVIMLIGNK 126
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL 198
+DL +RAV+ EDA +AE +GL F E SAL NV+ AF +L EIY +SKK L
Sbjct: 127 TDLKHLRAVATEDAQGYAEKEGLSFIETSALEATNVENAFQTILAEIYRIISKKSL 182
>gi|356548393|ref|XP_003542586.1| PREDICTED: ras-related protein RABA1f-like [Glycine max]
Length = 217
Score = 239 bits (610), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 118/212 (55%), Positives = 159/212 (75%), Gaps = 5/212 (2%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
DY+FKVV+IGDS VGKS +LSRFTKNEF +SKSTIGVEF TR++ ++ K++KAQIWDTA
Sbjct: 11 DYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDEKVLKAQIWDTA 70
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQERYRA+TSAYYRGA+GA++VYD+T+ +F+++ RW++ELR H D++I ++L+GNK+DL
Sbjct: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENMERWLKELRDHTDANIVVMLVGNKADL 130
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNGKV 205
+RAVS E+A FAE + FF E SAL NV+ AF +L +IY VSKK LE G+
Sbjct: 131 RHLRAVSTEEATAFAEREKTFFMETSALESMNVENAFTEVLTQIYHVVSKKALEIGD--- 187
Query: 206 DGPPMLAGSKIDVISGADLEISEMKKLSTCSC 237
D + G I+V G+ ++S +KK CS
Sbjct: 188 DPAALPKGQTINV--GSRDDVSAVKKDGCCSA 217
>gi|225449350|ref|XP_002282090.1| PREDICTED: ras-related protein Rab2BV [Vitis vinifera]
Length = 215
Score = 239 bits (610), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 124/216 (57%), Positives = 155/216 (71%), Gaps = 6/216 (2%)
Query: 21 IPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQ 80
+ + DY+FK+V+IGDS VGKS ILSRFT+NEF +SKSTIGVEF TRT+ + GK +KAQ
Sbjct: 5 VDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQ 64
Query: 81 IWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIG 140
IWDTAGQERYRA+TSAYYRGA+GA++VYDITKRQ+F++V RW+ ELR HADS+I I++ G
Sbjct: 65 IWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFENVQRWLRELRDHADSNIVIMMAG 124
Query: 141 NKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELEC 200
NKSDL +RAVS +DA AE +GL F E SAL NV+ AF +L +IY +SKK L
Sbjct: 125 NKSDLNHLRAVSGDDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAA 184
Query: 201 GNGKVDGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
P G+ I+V DL M K + CS
Sbjct: 185 QEAASINLPH--GTTINV---GDLS-GNMNKRTCCS 214
>gi|398408387|ref|XP_003855659.1| GTP-binding protein [Zymoseptoria tritici IPO323]
gi|339475543|gb|EGP90635.1| GTP-binding protein [Zymoseptoria tritici IPO323]
Length = 211
Score = 239 bits (610), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 114/182 (62%), Positives = 148/182 (81%)
Query: 20 MIPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKA 79
M D+ D++FKVV+IGDS VGKS +LSRFT+NEF DSKSTIGVEF TR++ ++ K IKA
Sbjct: 1 MANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDNKTIKA 60
Query: 80 QIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILI 139
QIWDTAGQERYRA+TSAYYRGA+GA++VYDI+K+Q++++V RW++ELR HAD++I I+L+
Sbjct: 61 QIWDTAGQERYRAITSAYYRGAVGALLVYDISKQQTYENVTRWLKELRDHADTNIVIMLV 120
Query: 140 GNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELE 199
GNKSDL +RAVS +DA +FA + GL F E SAL+ NV+ AF + L EIY VS K L+
Sbjct: 121 GNKSDLRHLRAVSTDDAKQFASENGLSFIETSALDASNVELAFQQELAEIYRIVSSKALD 180
Query: 200 CG 201
G
Sbjct: 181 QG 182
>gi|301088725|ref|XP_002894778.1| Rab11 family GTPase, putative [Phytophthora infestans T30-4]
gi|262108813|gb|EEY66865.1| Rab11 family GTPase, putative [Phytophthora infestans T30-4]
Length = 218
Score = 239 bits (610), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 118/213 (55%), Positives = 154/213 (72%), Gaps = 2/213 (0%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FK+V+IGDS VGKS +LSRFT+NEF +SKSTIGVEF T+++ GK IKAQIW
Sbjct: 7 DEYDYLFKIVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIVAEGKTIKAQIW 66
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDITK +F++V RW++ELR HAD++ I+L+GNK
Sbjct: 67 DTAGQERYRAITSAYYRGAVGALLVYDITKHGTFENVERWLKELRDHADANTVIMLVGNK 126
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
SDL +RAVS E+A+ FAE L F E SAL VD+AF R+L EIY +S+K ++
Sbjct: 127 SDLRHLRAVSTEEAMAFAEKNNLAFIETSALEATGVDSAFQRILTEIYKLMSRKTIQAEE 186
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLSTC 235
P G+ I + + E + KK S C
Sbjct: 187 NASASLP--TGNSIAITAENTTESQKKKKKSGC 217
>gi|258589865|gb|ACV82919.1| RabA2 [Phaseolus vulgaris]
Length = 216
Score = 239 bits (610), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 118/198 (59%), Positives = 146/198 (73%)
Query: 21 IPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQ 80
+ + DY+FK+V+IGDS VGKS ILSRFT+NEF +SKSTIGVEF TRT+ + GK +KAQ
Sbjct: 5 VDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQ 64
Query: 81 IWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIG 140
IWDTAGQERYRA+TSAYYRGA+GA++VYDITKRQ+FD+V RW+ ELR HADS+I I++ G
Sbjct: 65 IWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAG 124
Query: 141 NKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELEC 200
NKSDL +RAV +D AE +GL F E SAL N++ AF +L EIY VSKK L
Sbjct: 125 NKSDLSHLRAVYEDDGQNLAEREGLSFLETSALEATNIEKAFQTILTEIYHIVSKKALAA 184
Query: 201 GNGKVDGPPMLAGSKIDV 218
V G+ I+V
Sbjct: 185 QEAGVGTTLPGQGTTINV 202
>gi|356569037|ref|XP_003552713.1| PREDICTED: ras-related protein Rab11C-like [Glycine max]
Length = 217
Score = 239 bits (609), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 122/216 (56%), Positives = 157/216 (72%), Gaps = 4/216 (1%)
Query: 21 IPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQ 80
+ + DY+FK+V+IGDS VGKS ILSRFT+NEF +SKSTIGVEF TRT+ + GK +KAQ
Sbjct: 5 VDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQ 64
Query: 81 IWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIG 140
IWDTAGQERYRA+TSAYYRGA+GA++VYDITKRQ+F++V RW+ ELR HADS+I I++ G
Sbjct: 65 IWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFENVQRWLRELRDHADSNIVIMMAG 124
Query: 141 NKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELEC 200
NKSDL +RAVS +DA AE + L F E SAL NV+ AF +L +IY +SKK L
Sbjct: 125 NKSDLNHLRAVSTDDAQNLAEREALSFLETSALEAFNVEKAFQTILFDIYQIMSKKAL-A 183
Query: 201 GNGKVDGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
G + G+ I+V +++ S KK + CS
Sbjct: 184 AQGAASTTSLPHGTTINV---SNMSGSVEKKSACCS 216
>gi|336261533|ref|XP_003345554.1| hypothetical protein SMAC_06207 [Sordaria macrospora k-hell]
gi|380094775|emb|CCC07276.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 214
Score = 239 bits (609), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 119/205 (58%), Positives = 154/205 (75%), Gaps = 1/205 (0%)
Query: 20 MIPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKA 79
M D+ D++FKVV+IGDS VGKS +LSRFT+NEF DSKSTIGVEF TR++ ++ K IKA
Sbjct: 1 MANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKA 60
Query: 80 QIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILI 139
QIWDTAGQERYRA+TSAYYRGA+GA++VYDI+K +F++V RW++ELR HAD +I I+L+
Sbjct: 61 QIWDTAGQERYRAITSAYYRGAVGALLVYDISKGVTFENVNRWLKELRDHADQNIVIMLV 120
Query: 140 GNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELE 199
GNKSDL +RAV EDA +FAE+ L F E SAL+ NV+ AF +L EIY VS K +
Sbjct: 121 GNKSDLRHLRAVPTEDAKKFAEENHLSFIETSALDATNVELAFQNILTEIYKIVSTKNFD 180
Query: 200 CG-NGKVDGPPMLAGSKIDVISGAD 223
G +G +G L+G I + A+
Sbjct: 181 NGPSGSTEGHQNLSGQSISLSQTAN 205
>gi|302415737|ref|XP_003005700.1| GTP-binding protein ypt3 [Verticillium albo-atrum VaMs.102]
gi|261355116|gb|EEY17544.1| GTP-binding protein ypt3 [Verticillium albo-atrum VaMs.102]
gi|346973752|gb|EGY17204.1| GTP-binding protein ypt3 [Verticillium dahliae VdLs.17]
Length = 212
Score = 239 bits (609), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 117/204 (57%), Positives = 154/204 (75%), Gaps = 2/204 (0%)
Query: 20 MIPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKA 79
M D+ D++FKVV+IGDS VGKS +LSRFT+NEF DSKSTIGVEF TR++ ++ K IKA
Sbjct: 1 MANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKA 60
Query: 80 QIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILI 139
QIWDTAGQERYRA+TSAYYRGA+GA++VYDI+K Q++++V RW++ELR HAD++I I+L+
Sbjct: 61 QIWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLV 120
Query: 140 GNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELE 199
GNKSDL +RAV E+A FA + L F E SAL+ NV+ AF +L EIY VS K L+
Sbjct: 121 GNKSDLRHLRAVPTEEAKAFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALD 180
Query: 200 CGNGKVDGPPMLAGSKIDVISGAD 223
G+G + AG+ + + AD
Sbjct: 181 SGDGA--QANIAAGTSLSLSKPAD 202
>gi|303740|dbj|BAA02111.1| GTP-binding protein [Pisum sativum]
Length = 215
Score = 239 bits (609), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 119/214 (55%), Positives = 160/214 (74%), Gaps = 6/214 (2%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
++ DY+FK+V+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR+V I K++KAQIW
Sbjct: 6 EEYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSVRILDKLVKAQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYD T+ +F++V RW++ELR H D+ + I+L+GNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGALLVYDSTRHVTFENVERWLKELRDHTDAYVVIMLVGNK 125
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
+DL + AVS E+A FAE + ++F E SAL NVD+AF +L +IY VSK+ LE N
Sbjct: 126 TDLRHLCAVSTEEATAFAEKENIYFMETSALESMNVDSAFVEVLTQIYNVVSKRALEKEN 185
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
G P G I++ G D ++SE+KK + CS
Sbjct: 186 GSASVPK---GETINI--GRD-DVSEVKKSTCCS 213
>gi|296086163|emb|CBI31604.3| unnamed protein product [Vitis vinifera]
Length = 241
Score = 239 bits (609), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 124/220 (56%), Positives = 156/220 (70%), Gaps = 9/220 (4%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
DY+FK+V+IGDS VGKS ILSRFT+NEF +SKSTIGVEF TRT+ + GK +KAQIWDTA
Sbjct: 10 DYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTA 69
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQERYRA+TSAYYRGA+GA++VYDITKRQ+F++V RW+ ELR HADS+I I++ GNKSDL
Sbjct: 70 GQERYRAITSAYYRGAVGALLVYDITKRQTFENVQRWLRELRDHADSNIVIMMAGNKSDL 129
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNGKV 205
+RAVS +DA AE +GL F E SAL NV+ AF +L +IY +SKK L
Sbjct: 130 NHLRAVSGDDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAAS 189
Query: 206 DGPPM--------LAGSKIDVISGADLEISEMKKLSTCSC 237
P L+G+ + S EI+E + + CSC
Sbjct: 190 INLPHGTTINVGDLSGTVVKSGSLYSREINE-RHICECSC 228
>gi|429848505|gb|ELA23977.1| ras GTPase [Colletotrichum gloeosporioides Nara gc5]
Length = 212
Score = 239 bits (609), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 117/199 (58%), Positives = 152/199 (76%), Gaps = 3/199 (1%)
Query: 20 MIPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKA 79
M D+ D++FKVV+IGDS VGKS +LSRFT+NEF DSKSTIGVEF TR++ ++ K IKA
Sbjct: 1 MANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKA 60
Query: 80 QIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILI 139
QIWDTAGQERYRA+TSAYYRGA+GA++VYDI+K Q++++V RW++ELR HAD++I I+L+
Sbjct: 61 QIWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLV 120
Query: 140 GNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELE 199
GNKSDL +RAV E+A FA + L F E SAL+ NV+ AF +L EIY VS K L+
Sbjct: 121 GNKSDLRHLRAVPTEEAKSFASENHLSFIETSALDASNVELAFQNILTEIYRIVSSKALD 180
Query: 200 CGNG---KVDGPPMLAGSK 215
G+G + P +A SK
Sbjct: 181 SGDGAQASIGTGPSIALSK 199
>gi|154303550|ref|XP_001552182.1| hypothetical protein BC1G_09346 [Botryotinia fuckeliana B05.10]
gi|347840921|emb|CCD55493.1| similar to ras-related protein rab-11b [Botryotinia fuckeliana]
Length = 213
Score = 239 bits (609), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 113/183 (61%), Positives = 147/183 (80%)
Query: 20 MIPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKA 79
M D+ D++FKVV+IGDS VGKS +LSRFT+NEF DSKSTIGVEF TR++ ++ K IKA
Sbjct: 1 MANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDAKTIKA 60
Query: 80 QIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILI 139
QIWDTAGQERYRA+TSAYYRGA+GA++VYDI+K Q++++V RW++ELR HADS+I I+L+
Sbjct: 61 QIWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADSNIVIMLV 120
Query: 140 GNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELE 199
GNKSDL +RAV E+A +FA + L F E SAL+ NV+ AF +L EIY VS+K L+
Sbjct: 121 GNKSDLRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSQKALD 180
Query: 200 CGN 202
G+
Sbjct: 181 NGD 183
>gi|325190342|emb|CCA24816.1| Rab11 family GTPase putative [Albugo laibachii Nc14]
Length = 216
Score = 239 bits (609), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 119/213 (55%), Positives = 154/213 (72%), Gaps = 3/213 (1%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D DY+FK+V+IGDS VGKS +LSRFT+NEF +SKSTIGVEF T+++ GK IKAQIW
Sbjct: 7 DDYDYLFKIVLIGDSGVGKSNLLSRFTRNEFHLESKSTIGVEFATKSIVAEGKTIKAQIW 66
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDITK SF++V RW++ELR HAD++ I+L+GNK
Sbjct: 67 DTAGQERYRAITSAYYRGAVGALLVYDITKHVSFENVERWLKELREHADANTVIMLVGNK 126
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
SDL +RAV E+A+ FAE L F E SAL VD+AF R+L EIY +S+K ++
Sbjct: 127 SDLRHLRAVPTEEAMAFAEKNNLAFIETSALEAIGVDSAFQRILTEIYKLMSRKTMQAEE 186
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLSTC 235
++ P +G I + S E + KK S C
Sbjct: 187 NQISIP---SGDNIVITSDKTEEGVKKKKSSCC 216
>gi|388498522|gb|AFK37327.1| unknown [Lotus japonicus]
Length = 212
Score = 239 bits (609), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 118/212 (55%), Positives = 156/212 (73%), Gaps = 8/212 (3%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
DY+FK+V+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR+V I+ K +KAQIWDTA
Sbjct: 9 DYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSVRIHDKTVKAQIWDTA 68
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQERYRA+TSAYYRGA+GA++VYD+T++ +F++V RW++ELR H D++I I+L+GNK+DL
Sbjct: 69 GQERYRAITSAYYRGAVGALIVYDVTRQVTFENVQRWLKELRDHTDANIVIMLVGNKADL 128
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNGKV 205
+RAV E+A FAE + +F E SAL NVD AF +L EIY VS+K LE GN
Sbjct: 129 RHLRAVPTEEATAFAERENTYFMETSALESLNVDNAFIEVLSEIYNVVSRKTLEKGN--- 185
Query: 206 DGPPMLAGSKIDVISGADLEISEMKKLSTCSC 237
D + G I++ ++S +KK CS
Sbjct: 186 DPGALPQGQTINL-----GDVSAVKKPGCCSA 212
>gi|238483611|ref|XP_002373044.1| Ras GTPase Rab11, putative [Aspergillus flavus NRRL3357]
gi|220701094|gb|EED57432.1| Ras GTPase Rab11, putative [Aspergillus flavus NRRL3357]
gi|391870993|gb|EIT80162.1| GTPase Rab11/YPT3, small G protein superfamily [Aspergillus oryzae
3.042]
Length = 211
Score = 239 bits (609), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 114/183 (62%), Positives = 146/183 (79%)
Query: 20 MIPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKA 79
M D+ D++FKVV+IGDS VGKS +LSRFT+NEF DSKSTIGVEF TR++ ++ K IKA
Sbjct: 1 MANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKA 60
Query: 80 QIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILI 139
QIWDTAGQERYRA+TSAYYRGA+GA++VYDI+K Q++D+V RW++ELR HADS+I I+L+
Sbjct: 61 QIWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYDNVNRWLKELRDHADSNIVIMLV 120
Query: 140 GNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELE 199
GNKSDL +RAV E+A +FA + L F E SAL+ NV+ AF +L EIY VS K L+
Sbjct: 121 GNKSDLRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALD 180
Query: 200 CGN 202
G+
Sbjct: 181 SGD 183
>gi|325191836|emb|CCA26309.1| Rab11 family GTPase putative [Albugo laibachii Nc14]
Length = 380
Score = 239 bits (609), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 119/213 (55%), Positives = 154/213 (72%), Gaps = 3/213 (1%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D DY+FK+V+IGDS VGKS +LSRFT+NEF +SKSTIGVEF T+++ GK IKAQIW
Sbjct: 171 DDYDYLFKIVLIGDSGVGKSNLLSRFTRNEFHLESKSTIGVEFATKSIVAEGKTIKAQIW 230
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDITK SF++V RW++ELR HAD++ I+L+GNK
Sbjct: 231 DTAGQERYRAITSAYYRGAVGALLVYDITKHVSFENVERWLKELREHADANTVIMLVGNK 290
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
SDL +RAV E+A+ FAE L F E SAL VD+AF R+L EIY +S+K ++
Sbjct: 291 SDLRHLRAVPTEEAMAFAEKNNLAFIETSALEAIGVDSAFQRILTEIYKLMSRKTMQAEE 350
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLSTC 235
++ P +G I + S E + KK S C
Sbjct: 351 NQISIP---SGDNIVITSDKTEEGVKKKKSSCC 380
>gi|326521104|dbj|BAJ96755.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 216
Score = 238 bits (608), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 121/216 (56%), Positives = 156/216 (72%), Gaps = 5/216 (2%)
Query: 21 IPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQ 80
+ ++ DY+FK+V+IGDS VGKS ILSRFT+NEF +SKSTIGVEF TRT+ I GK +KAQ
Sbjct: 5 VDNEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQIEGKTVKAQ 64
Query: 81 IWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIG 140
IWDTAGQERYRA+TSAYYRGA+GA++V+DITKRQ+FD+V RW+ ELR HAD++I ++++G
Sbjct: 65 IWDTAGQERYRAITSAYYRGAVGALLVFDITKRQTFDNVQRWLRELRDHADANIVVMMVG 124
Query: 141 NKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELEC 200
NKSDL +R+V ED+ F+E +GL F E SAL NV+ AF +L EI+ VSKK L
Sbjct: 125 NKSDLNHLRSVPEEDSQAFSEKEGLSFLETSALEAINVEKAFHTVLSEIHQIVSKKALAA 184
Query: 201 GNGKVDGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
+ G+ I+V E S K S CS
Sbjct: 185 QESAAANGRSMQGTTINVA-----EPSTNAKGSCCS 215
>gi|358381001|gb|EHK18677.1| secretion-related small GTPase [Trichoderma virens Gv29-8]
Length = 212
Score = 238 bits (608), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 120/212 (56%), Positives = 158/212 (74%), Gaps = 2/212 (0%)
Query: 20 MIPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKA 79
M D+ D++FKVV+IGDS VGKS +LSRFT+NEF DSKSTIGVEF TR++ ++ K IKA
Sbjct: 1 MANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKA 60
Query: 80 QIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILI 139
QIWDTAGQERYRA+TSAYYRGA+GA++VYDI+K Q++++V RW++ELR HAD++I I+L+
Sbjct: 61 QIWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLV 120
Query: 140 GNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELE 199
GNKSDL +RAV ++A FA + L F E SAL+ NV+ AF +L EIY VS K L+
Sbjct: 121 GNKSDLRHLRAVPTDEAKGFASENHLSFIETSALDASNVELAFQNILTEIYRIVSSKALD 180
Query: 200 CGNGKVDGPPMLAGSKIDVISGADLEISEMKK 231
G+G + AG+ I + AD E S+ K
Sbjct: 181 SGDGA--QATIGAGTNISLSKAADDEASKGGK 210
>gi|302691566|ref|XP_003035462.1| hypothetical protein SCHCODRAFT_66290 [Schizophyllum commune H4-8]
gi|300109158|gb|EFJ00560.1| hypothetical protein SCHCODRAFT_66290 [Schizophyllum commune H4-8]
Length = 212
Score = 238 bits (608), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 119/210 (56%), Positives = 159/210 (75%), Gaps = 6/210 (2%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
DY+FK+V+IGDS VGKS +LSRFT+NEF D+KSTIGVEF TR++T+ GKI+KAQIWDTA
Sbjct: 8 DYLFKIVLIGDSGVGKSNLLSRFTRNEFSQDTKSTIGVEFATRSITVEGKILKAQIWDTA 67
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQERYRA+T+AYYRGA+GA++VYDI+KR S+++V RW++ELR HADS+I I+L+GNKSDL
Sbjct: 68 GQERYRAITAAYYRGAVGALLVYDISKRGSYENVQRWLKELRDHADSNIVIMLVGNKSDL 127
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNGKV 205
+RAV ++A FA + GL F E SAL+ NVD+AF L +IY VS + LE +
Sbjct: 128 KHLRAVPTDEARAFAAENGLSFIETSALDASNVDSAFETNLTDIYRIVSSRTLESSANPI 187
Query: 206 DGPPMLAGSKIDVISGADLEISEMKKLSTC 235
+ P +G+ + V G L+ S K+ + C
Sbjct: 188 EAP---SGNTVSV--GPSLD-SNAKQSNGC 211
>gi|15242483|ref|NP_199387.1| Ras-related protein RABA1c [Arabidopsis thaliana]
gi|297794685|ref|XP_002865227.1| hypothetical protein ARALYDRAFT_494409 [Arabidopsis lyrata subsp.
lyrata]
gi|75171186|sp|Q9FK68.1|RAA1C_ARATH RecName: Full=Ras-related protein RABA1c; Short=AtRABA1c
gi|13877913|gb|AAK44034.1|AF370219_1 putative Rab-type small GTP-binding protein [Arabidopsis thaliana]
gi|9758678|dbj|BAB09217.1| Rab-type small GTP-binding protein-like [Arabidopsis thaliana]
gi|16323446|gb|AAL15217.1| putative Rab-type small GTP-binding protein [Arabidopsis thaliana]
gi|297311062|gb|EFH41486.1| hypothetical protein ARALYDRAFT_494409 [Arabidopsis lyrata subsp.
lyrata]
gi|332007909|gb|AED95292.1| Ras-related protein RABA1c [Arabidopsis thaliana]
Length = 216
Score = 238 bits (608), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 119/214 (55%), Positives = 157/214 (73%), Gaps = 6/214 (2%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGKS +LSRFTKNEF +SKSTIGVEF TR++ ++ K+IKAQIW
Sbjct: 8 DEYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDDKVIKAQIW 67
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYD+T+ +F++V W++ELR H D +I ++L+GNK
Sbjct: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVETWLKELRNHTDPNIVVMLVGNK 127
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
SDL + AV EDA FAE + L+F E SAL NV+ AF +L +I+ VSKK +E +
Sbjct: 128 SDLRHLVAVQTEDAKSFAEKESLYFMETSALEATNVENAFAEVLTQIHHIVSKKAMEAAS 187
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
+ P G KID+ G D +S +KK CS
Sbjct: 188 ESANVPS--KGDKIDI--GKD--VSAVKKGGCCS 215
>gi|326521852|dbj|BAK04054.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 225
Score = 238 bits (608), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 115/197 (58%), Positives = 152/197 (77%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TRT+ + GKIIKAQIWDTA
Sbjct: 17 DYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLHVEGKIIKAQIWDTA 76
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQERYRA+TSAYYRGALGAV+VYD+TK +F++++RW++ELR HAD++IRI+L+GNK+DL
Sbjct: 77 GQERYRAITSAYYRGALGAVLVYDVTKPTTFENISRWLKELRDHADANIRIMLVGNKTDL 136
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNGKV 205
+RAV+ +DA +AE +GL + E SAL NV+ AF +L +IY +SKK + +
Sbjct: 137 KHLRAVTTDDAGSYAEAEGLSYIETSALEAMNVEEAFQLILGDIYRTISKKAVASEEDRA 196
Query: 206 DGPPMLAGSKIDVISGA 222
+ G I+V + A
Sbjct: 197 AAAGVKEGKTINVAATA 213
>gi|310798039|gb|EFQ32932.1| Ras family protein [Glomerella graminicola M1.001]
Length = 212
Score = 238 bits (608), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 120/206 (58%), Positives = 154/206 (74%), Gaps = 6/206 (2%)
Query: 20 MIPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKA 79
M D+ D++FKVV+IGDS VGKS +LSRFT+NEF DSKSTIGVEF TR++ ++ K IKA
Sbjct: 1 MANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKA 60
Query: 80 QIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILI 139
QIWDTAGQERYRA+TSAYYRGA+GA++VYDI+K Q++++V RW++ELR HAD++I I+L+
Sbjct: 61 QIWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLV 120
Query: 140 GNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELE 199
GNKSDL +RAV E+A FA + L F E SAL+ NV+ AF +L EIY VS K L+
Sbjct: 121 GNKSDLRHLRAVPTEEAKAFASENHLSFIETSALDASNVELAFQNILTEIYRIVSSKALD 180
Query: 200 CGNGKVDGP--PMLAGSKIDVISGAD 223
G DGP + AG I + AD
Sbjct: 181 SG----DGPQATIGAGPGISLTKPAD 202
>gi|19114579|ref|NP_593667.1| GTPase Ypt3 [Schizosaccharomyces pombe 972h-]
gi|141306|sp|P17610.1|YPT3_SCHPO RecName: Full=GTP-binding protein ypt3; AltName: Full=RAB
gi|5038|emb|CAA36946.1| unnamed protein product [Schizosaccharomyces pombe]
gi|5152|emb|CAA36320.1| ypt3 [Schizosaccharomyces pombe]
gi|1122368|emb|CAA92383.1| GTPase Ypt3 [Schizosaccharomyces pombe]
Length = 214
Score = 238 bits (608), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 118/213 (55%), Positives = 158/213 (74%), Gaps = 4/213 (1%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FK V+IGDS VGKS +L RFT+NEF +SKSTIGVEF TR + ++ K IKAQIW
Sbjct: 5 DEYDYLFKTVLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKIKAQIW 64
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDITK+ SFD+V RW++ELR HADS+I I+L+GNK
Sbjct: 65 DTAGQERYRAITSAYYRGAVGALIVYDITKQSSFDNVGRWLKELREHADSNIVIMLVGNK 124
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
+DL+ +RAVS E+A FA + L F E SA++ NV+ AF +L EI+ VS + LE G+
Sbjct: 125 TDLLHLRAVSTEEAQAFAAENNLSFIETSAMDASNVEEAFQTVLTEIFRIVSNRSLEAGD 184
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLSTC 235
DG AG +++ + ++++ K S C
Sbjct: 185 ---DGVHPTAGQTLNIAPTMN-DLNKKKSSSQC 213
>gi|449300707|gb|EMC96719.1| hypothetical protein BAUCODRAFT_487092 [Baudoinia compniacensis
UAMH 10762]
Length = 212
Score = 238 bits (608), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 115/182 (63%), Positives = 144/182 (79%)
Query: 20 MIPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKA 79
M D+ DY+FKVV+IGDS VGKS +LSRFT+NEF DSKSTIGVEF TR++ ++ K IKA
Sbjct: 1 MANDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDTKTIKA 60
Query: 80 QIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILI 139
QIWDTAGQERYRA+TSAYYRGA+GA++VYDI+K Q++++V RW++ELR HAD++I I+L+
Sbjct: 61 QIWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADNNIVIMLV 120
Query: 140 GNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELE 199
GNKSDL +RAV E+A EFA GL F E SAL+ NV+ AF L EIY VS K +E
Sbjct: 121 GNKSDLRHLRAVPTEEAKEFASQNGLSFIETSALDASNVELAFQNELTEIYRIVSSKAIE 180
Query: 200 CG 201
G
Sbjct: 181 QG 182
>gi|37788825|gb|AAP51290.1| Rab11-1a [Limulus polyphemus]
gi|37900937|gb|AAP51291.1| Rab11-1b [Limulus polyphemus]
Length = 217
Score = 238 bits (608), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 118/213 (55%), Positives = 156/213 (73%), Gaps = 3/213 (1%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIW
Sbjct: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI K ++++V RW++ELR HAD +I I+L+GNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADQNIVIMLVGNK 125
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
SDL +RAV ++A FAE L F E SAL+ NV+ AF ++L EIY VS+K++
Sbjct: 126 SDLRHLRAVPTDEARAFAEKNILSFIETSALDSTNVEAAFQQILTEIYRIVSQKQIR--- 182
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLSTC 235
D P +G + IS A + S+ +K C
Sbjct: 183 NDADNDPSPSGDNVKAISIAPTDSSDTRKRQCC 215
>gi|351722751|ref|NP_001236487.1| uncharacterized protein LOC100499822 [Glycine max]
gi|255626919|gb|ACU13804.1| unknown [Glycine max]
Length = 218
Score = 238 bits (608), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 117/214 (54%), Positives = 154/214 (71%), Gaps = 4/214 (1%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FK+V IGDS VGKS +LSRFT+NEF +SKSTIGVEF T+++ I+ K+IKAQIW
Sbjct: 8 DEYDYLFKLVFIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLDIDAKVIKAQIW 67
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYD+T+R +F++ ARW++ELR H D +I ++LIGNK
Sbjct: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNIVVMLIGNK 127
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
SDL + AV ED FAE + L+F E SAL NV+ AF +L +IY VSK+ +E GN
Sbjct: 128 SDLRHLVAVPTEDGKSFAEKESLYFMETSALEATNVENAFTEVLSQIYRIVSKRAVEAGN 187
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
G I+V + S +KK+ CS
Sbjct: 188 NASSSAVPSKGQTINVKDDS----SVLKKIGCCS 217
>gi|400598893|gb|EJP66600.1| Ras family protein [Beauveria bassiana ARSEF 2860]
Length = 212
Score = 238 bits (608), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 120/212 (56%), Positives = 158/212 (74%), Gaps = 2/212 (0%)
Query: 20 MIPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKA 79
M D+ D++FKVV+IGDS VGKS +LSRFT+NEF DSKSTIGVEF TR++ ++ K IKA
Sbjct: 1 MANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKA 60
Query: 80 QIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILI 139
QIWDTAGQERYRA+TSAYYRGA+GA++VYDI+K Q++++V RW++ELR HAD++I I+L+
Sbjct: 61 QIWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLV 120
Query: 140 GNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELE 199
GNKSDL +RAV E+A FA + L F E SAL+ NV+ AF +L EIY VS K L+
Sbjct: 121 GNKSDLRHLRAVPTEEAKAFASENHLSFIETSALDASNVELAFQNILTEIYRIVSSKALD 180
Query: 200 CGNGKVDGPPMLAGSKIDVISGADLEISEMKK 231
G+G + AG+ I + AD + S+ K
Sbjct: 181 SGDGA--QATIGAGTNISLSKPADDDASKGGK 210
>gi|302811619|ref|XP_002987498.1| rab family GTPase [Selaginella moellendorffii]
gi|300144652|gb|EFJ11334.1| rab family GTPase [Selaginella moellendorffii]
Length = 216
Score = 238 bits (608), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 115/213 (53%), Positives = 160/213 (75%), Gaps = 5/213 (2%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK+IKAQIW
Sbjct: 7 DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSINVDGKLIKAQIW 66
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYD+T+ +F++V RW++EL+ H DS+I ++L+GNK
Sbjct: 67 DTAGQERYRAITSAYYRGAVGALLVYDVTRLATFENVERWLKELKDHTDSNIVVMLVGNK 126
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
SDL +R VS ED ++E +GL+F E SAL NV+ +F ++L +IY VSKK L+ G
Sbjct: 127 SDLRHLRCVSTEDGQAYSEKEGLYFMETSALESVNVENSFKQILTQIYRVVSKKALDVG- 185
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLSTC 235
+ P + G K I+ + +++ KK+ C
Sbjct: 186 ---EDPSAVPG-KGQTINVSKDDVTATKKVGCC 214
>gi|328860505|gb|EGG09611.1| hypothetical protein MELLADRAFT_115734 [Melampsora larici-populina
98AG31]
Length = 214
Score = 238 bits (608), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 119/198 (60%), Positives = 151/198 (76%), Gaps = 3/198 (1%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
D++FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++ K IKAQIWDTA
Sbjct: 8 DFLFKVVLIGDSGVGKSNLLSRFTRNEFNMESKSTIGVEFATRSIVVDSKTIKAQIWDTA 67
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQERYRA+TSAYYRGA+GA++VYDI+K+QS+ HV RW++ELR HADS+I I+L+GNKSDL
Sbjct: 68 GQERYRAITSAYYRGAVGALLVYDISKQQSYTHVQRWLKELRDHADSNIVIMLVGNKSDL 127
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNGKV 205
+RAV E+A FA + L F E SA++ NV++AF +L +IY VS K LE V
Sbjct: 128 RHLRAVPTEEAKAFAAENNLSFIETSAMDASNVESAFQNILTDIYRIVSSKALESSGDSV 187
Query: 206 DGPPMLAGSKIDVISGAD 223
GP +GS I V AD
Sbjct: 188 -GPT--SGSTITVTPTAD 202
>gi|297851308|ref|XP_002893535.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297339377|gb|EFH69794.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 218
Score = 238 bits (608), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 119/214 (55%), Positives = 157/214 (73%), Gaps = 4/214 (1%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D DY+FKVV+ GDS VGKS +LSRFT+N+F DS++TIGVEF TR++ + KI+KAQIW
Sbjct: 8 DDYDYLFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRATIGVEFATRSIQCDDKIVKAQIW 67
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYD+T+ +F++V RW++ELR H D++I I+L+GNK
Sbjct: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMLVGNK 127
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
+DL +RA+S E+A FAE + FF E SAL NVD AF +L +IY VSKK LE G+
Sbjct: 128 ADLRHLRAISTEEAKAFAERENTFFMETSALEAVNVDNAFTEVLTQIYRVVSKKALEAGD 187
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
P G I+V G+ +IS +KK CS
Sbjct: 188 DPTTALP--KGQMINV--GSRDDISAVKKPGCCS 217
>gi|357147666|ref|XP_003574433.1| PREDICTED: ras-related protein RABA1f-like [Brachypodium
distachyon]
Length = 216
Score = 238 bits (608), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 118/214 (55%), Positives = 160/214 (74%), Gaps = 5/214 (2%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D DY+FKVV+IGDS VGKS +L+RFT+NEF +SKSTIGVEF TR++ ++ K++KAQIW
Sbjct: 7 DDYDYLFKVVLIGDSGVGKSNLLTRFTRNEFSLESKSTIGVEFATRSIRVDDKVVKAQIW 66
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA+VVYD+T+ +F++V RW++EL+ H D++I I+L+GNK
Sbjct: 67 DTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWLKELKDHTDANIVIMLVGNK 126
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
+DL +RAV EDA FAE + +F+E SAL NV+ AF +L +IY VSKK L+ G+
Sbjct: 127 ADLRHLRAVPVEDAKAFAEREYTYFTETSALEAMNVEDAFTEVLTQIYRVVSKKALDIGD 186
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
PP G I+V G+ ++S +KK CS
Sbjct: 187 DPA-APPR--GQTINV--GSKDDVSAVKKAGCCS 215
>gi|145229443|ref|XP_001389030.1| Ras-related protein Rab-11A [Aspergillus niger CBS 513.88]
gi|134055135|emb|CAK37081.1| unnamed protein product [Aspergillus niger]
gi|350638153|gb|EHA26509.1| hypothetical protein ASPNIDRAFT_205975 [Aspergillus niger ATCC
1015]
gi|358366919|dbj|GAA83539.1| Ras GTPase Rab11 [Aspergillus kawachii IFO 4308]
Length = 211
Score = 238 bits (608), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 117/200 (58%), Positives = 152/200 (76%), Gaps = 4/200 (2%)
Query: 20 MIPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKA 79
M D+ D++FKVV+IGDS VGKS +LSRFT+NEF DSKSTIGVEF TR++ ++ K IKA
Sbjct: 1 MANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKA 60
Query: 80 QIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILI 139
QIWDTAGQERYRA+TSAYYRGA+GA++VYDI+K Q++D+V RW++ELR HADS+I I+L+
Sbjct: 61 QIWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYDNVNRWLKELRDHADSNIVIMLV 120
Query: 140 GNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELE 199
GNKSDL +RAV E+A +FA + L F E SAL+ NV+ AF +L EIY VS K L+
Sbjct: 121 GNKSDLRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALD 180
Query: 200 CGNGKVDGPPMLAGSKIDVI 219
G D + G + D++
Sbjct: 181 GG----DAGQTVLGDRRDMV 196
>gi|356544190|ref|XP_003540537.1| PREDICTED: ras-related protein RABA4c-like [Glycine max]
Length = 228
Score = 238 bits (608), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 119/217 (54%), Positives = 158/217 (72%), Gaps = 7/217 (3%)
Query: 25 IDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDT 84
IDY+FK+V+ GDS VGKSQ+L+RF KNEF SK TIGVEF TRTV ++ K++KAQIWDT
Sbjct: 12 IDYMFKIVMTGDSGVGKSQLLNRFVKNEFHMKSKPTIGVEFLTRTVVMDHKLVKAQIWDT 71
Query: 85 AGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSD 144
AGQERY+A+T+AYYRGA GA++ YDITK+Q+FDHV +W++ELR HAD +I ++L+GNKSD
Sbjct: 72 AGQERYQAITTAYYRGATGALLAYDITKQQTFDHVEKWLDELRIHADKNILVMLVGNKSD 131
Query: 145 LVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL-----E 199
L +RAV E A +FA+ +GLFF E SAL+ NV++AF LL ++Y VS+K + E
Sbjct: 132 LSSLRAVPTEVARDFAQQEGLFFLETSALDSSNVESAFIGLLSQVYRTVSRKHILVDGHE 191
Query: 200 CGNGKVDGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
KV+ L G+KI V S + K+ + CS
Sbjct: 192 SNWDKVNLE--LEGTKIKVPSQEPECQNAKKRFNCCS 226
>gi|388517625|gb|AFK46874.1| unknown [Lotus japonicus]
Length = 216
Score = 238 bits (608), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 117/198 (59%), Positives = 145/198 (73%)
Query: 21 IPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQ 80
+ + DY+FK+++IGDS VGKS ILSRFT+NEF +SKSTIGVEF TRT+ + GK +KAQ
Sbjct: 5 VDHEYDYLFKIILIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQ 64
Query: 81 IWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIG 140
IWDTAGQERYRA+TSAYYRGA+GA++VYDITKRQ+FD+V RW+ ELR HADS+I I++ G
Sbjct: 65 IWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAG 124
Query: 141 NKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELEC 200
NKSDL +RAVS +D AE GL F E SAL N++ AF +L EIY VSKK L
Sbjct: 125 NKSDLNHLRAVSEDDGGALAEKDGLSFLETSALEATNIEKAFQTILTEIYHIVSKKALAA 184
Query: 201 GNGKVDGPPMLAGSKIDV 218
G+ I+V
Sbjct: 185 QEATAGASVPGQGTTINV 202
>gi|156063958|ref|XP_001597901.1| hypothetical protein SS1G_02097 [Sclerotinia sclerotiorum 1980]
gi|154697431|gb|EDN97169.1| hypothetical protein SS1G_02097 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 213
Score = 238 bits (607), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 113/183 (61%), Positives = 147/183 (80%)
Query: 20 MIPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKA 79
M D+ D++FKVV+IGDS VGKS +LSRFT+NEF DSKSTIGVEF TR++ ++ K IKA
Sbjct: 1 MANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDAKTIKA 60
Query: 80 QIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILI 139
QIWDTAGQERYRA+TSAYYRGA+GA++VYDI+K Q++++V RW++ELR HADS+I I+L+
Sbjct: 61 QIWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADSNIVIMLV 120
Query: 140 GNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELE 199
GNKSDL +RAV E+A +FA + L F E SAL+ NV+ AF +L EIY VS+K L+
Sbjct: 121 GNKSDLRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSQKALD 180
Query: 200 CGN 202
G+
Sbjct: 181 NGD 183
>gi|453087907|gb|EMF15948.1| ras GTPase Rab11 [Mycosphaerella populorum SO2202]
Length = 213
Score = 238 bits (607), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 115/189 (60%), Positives = 145/189 (76%)
Query: 20 MIPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKA 79
M D+ D++FKVV+IGDS VGKS +LSRFT+NEF DSKSTIGVEF TR++ ++ K IKA
Sbjct: 1 MANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDNKTIKA 60
Query: 80 QIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILI 139
QIWDTAGQERYRA+TSAYYRGA+GA++ YD+TK Q+FD+V RW++ELR HAD++I I+L+
Sbjct: 61 QIWDTAGQERYRAITSAYYRGAVGALLCYDLTKSQTFDNVTRWLKELRDHADTNIVIMLV 120
Query: 140 GNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELE 199
GNKSDL +RAV +DA FA + GL F E SAL+ NV+ AF + L EIY VS K L+
Sbjct: 121 GNKSDLRHLRAVPTDDAKAFAAENGLSFIETSALDASNVELAFQQELTEIYRIVSSKALD 180
Query: 200 CGNGKVDGP 208
G P
Sbjct: 181 NDAGSAGAP 189
>gi|358396186|gb|EHK45567.1| secretion-related small GTPase [Trichoderma atroviride IMI 206040]
Length = 212
Score = 238 bits (607), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 119/212 (56%), Positives = 158/212 (74%), Gaps = 2/212 (0%)
Query: 20 MIPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKA 79
M D+ D++FKVV+IGDS VGKS +LSRFT+NEF DSKSTIGVEF TR++ ++ K IKA
Sbjct: 1 MANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKA 60
Query: 80 QIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILI 139
QIWDTAGQERYRA+TSAYYRGA+GA++VYDI+K Q++++V RW++ELR HAD++I I+L+
Sbjct: 61 QIWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLV 120
Query: 140 GNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELE 199
GNKSDL +RAV ++A FA + L F E SAL+ NV+ AF +L EIY VS K L+
Sbjct: 121 GNKSDLRHLRAVPTDEAKAFASENHLSFIETSALDASNVELAFQNILTEIYRIVSSKALD 180
Query: 200 CGNGKVDGPPMLAGSKIDVISGADLEISEMKK 231
G+G + AG+ I + AD E ++ K
Sbjct: 181 SGDGA--QATIGAGTNISLSKAADDEAAKGGK 210
>gi|37788823|gb|AAP51289.1| Rab11-1c [Limulus polyphemus]
Length = 217
Score = 238 bits (607), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 118/213 (55%), Positives = 156/213 (73%), Gaps = 3/213 (1%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIW
Sbjct: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI K ++++V RW++ELR HAD +I I+L+GNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADQNIVIMLVGNK 125
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
SDL +RAV ++A FAE L F E SAL+ NV+ AF ++L EIY VS+K++
Sbjct: 126 SDLRHLRAVPTDEARAFAEKNILSFIETSALDSTNVEVAFQQILTEIYRIVSQKQIR--- 182
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLSTC 235
D P +G + IS A + S+ +K C
Sbjct: 183 NDADNDPSPSGDNVKAISIAPTDSSDTRKRQCC 215
>gi|224145285|ref|XP_002325590.1| predicted protein [Populus trichocarpa]
gi|222862465|gb|EEE99971.1| predicted protein [Populus trichocarpa]
Length = 216
Score = 238 bits (607), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 118/215 (54%), Positives = 160/215 (74%), Gaps = 6/215 (2%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D DY+FK+V+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++ K++KAQIW
Sbjct: 8 DDYDYLFKLVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVVKAQIW 67
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYD+T+ +F++V RW++ELR H DS+I I+L+GNK
Sbjct: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNK 127
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
+DL +RAV+ EDA FAE + FF E SAL NV+ AF +L +I+ VS+K L+ G+
Sbjct: 128 ADLRHLRAVTTEDATAFAERENTFFMETSALESLNVENAFTEVLTQIHRVVSRKALDVGD 187
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLSTCSC 237
D + G I V G D ++S +KK+ CS
Sbjct: 188 ---DPAALPKGQTITV--GKD-DVSAVKKVGCCSA 216
>gi|380492729|emb|CCF34399.1| Ras-like protein Rab-11B [Colletotrichum higginsianum]
Length = 212
Score = 238 bits (607), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 120/206 (58%), Positives = 154/206 (74%), Gaps = 6/206 (2%)
Query: 20 MIPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKA 79
M D+ D++FKVV+IGDS VGKS +LSRFT+NEF DSKSTIGVEF TR++ ++ K IKA
Sbjct: 1 MANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKA 60
Query: 80 QIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILI 139
QIWDTAGQERYRA+TSAYYRGA+GA++VYDI+K Q++++V RW++ELR HAD++I I+L+
Sbjct: 61 QIWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLV 120
Query: 140 GNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELE 199
GNKSDL +RAV E+A FA + L F E SAL+ NV+ AF +L EIY VS K L+
Sbjct: 121 GNKSDLRHLRAVPTEEAKAFASENHLSFIETSALDASNVELAFQNILTEIYRIVSSKALD 180
Query: 200 CGNGKVDGP--PMLAGSKIDVISGAD 223
G DGP + AG I + AD
Sbjct: 181 SG----DGPQATIGAGPGISLTKPAD 202
>gi|449450768|ref|XP_004143134.1| PREDICTED: ras-related protein Rab11C-like [Cucumis sativus]
gi|449520383|ref|XP_004167213.1| PREDICTED: ras-related protein Rab11C-like [Cucumis sativus]
Length = 217
Score = 238 bits (607), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 111/176 (63%), Positives = 142/176 (80%)
Query: 21 IPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQ 80
+ + DY+FK+V+IGDS VGKS ILSRFT+NEF +SKSTIGVEF T+T+ + GK +KAQ
Sbjct: 5 VDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTKTLQVEGKTVKAQ 64
Query: 81 IWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIG 140
IWDTAGQERYRA+TSAYYRGA+GA++VYD+TKRQ+F++V RW+ ELR HADS+I I++IG
Sbjct: 65 IWDTAGQERYRAITSAYYRGAVGALLVYDLTKRQTFENVQRWLRELRDHADSNIVIVMIG 124
Query: 141 NKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKK 196
NKSDL +R+VS +D AE +GL F E SAL+ N+D AF +L EIY +SKK
Sbjct: 125 NKSDLSHLRSVSEDDGQTMAEKEGLSFIETSALDATNIDKAFQTILTEIYHIISKK 180
>gi|226491888|ref|NP_001147252.1| ras-related protein Rab11C [Zea mays]
gi|195609118|gb|ACG26389.1| ras-related protein Rab11C [Zea mays]
Length = 217
Score = 238 bits (607), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 115/201 (57%), Positives = 152/201 (75%), Gaps = 1/201 (0%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
++ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TRT+ + G+ +KAQIW
Sbjct: 7 EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQIW 66
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGALGA++VYD+TK +F++V+RW++ELR HAD +I I+LIGNK
Sbjct: 67 DTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADYNIVIMLIGNK 126
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
+DL +RAV+ EDA +AE +GL F E SAL NV+ AF +L EIY +SKK +
Sbjct: 127 TDLKHLRAVATEDAQSYAEKEGLSFIETSALEALNVEKAFQTILSEIYRIISKKSISSDQ 186
Query: 203 GKVDGPPMLAGSKIDVISGAD 223
+ + G IDV + ++
Sbjct: 187 ASANA-NVKEGQTIDVAASSE 206
>gi|401880969|gb|EJT45277.1| hypothetical protein A1Q1_06346 [Trichosporon asahii var. asahii
CBS 2479]
gi|406697082|gb|EKD00350.1| hypothetical protein A1Q2_05319 [Trichosporon asahii var. asahii
CBS 8904]
Length = 213
Score = 238 bits (607), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 119/198 (60%), Positives = 152/198 (76%), Gaps = 3/198 (1%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK +KAQIWDTA
Sbjct: 8 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTVKAQIWDTA 67
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQERYRA+TSAYYRGA+GA++VYDI K ++++V RW++ELR HAD++I I+L+GNKSDL
Sbjct: 68 GQERYRAITSAYYRGAVGALLVYDIAKHSTYENVTRWLKELRDHADANIVIMLVGNKSDL 127
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNGKV 205
+RAVS E+A FA +QGL F E SAL+ NV++AF +L +IY VS K LE +G V
Sbjct: 128 KHLRAVSTEEAKAFATEQGLSFIETSALDASNVESAFQNILTDIYRIVSSKSLES-SGDV 186
Query: 206 DGPPMLAGSKIDVISGAD 223
P G I V AD
Sbjct: 187 IKPS--GGETILVTPTAD 202
>gi|359493623|ref|XP_002282900.2| PREDICTED: uncharacterized protein LOC100265827 [Vitis vinifera]
Length = 715
Score = 238 bits (607), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 120/214 (56%), Positives = 157/214 (73%), Gaps = 5/214 (2%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++ KI+KAQIW
Sbjct: 506 DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKIVKAQIW 565
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYD+T+ +F++V RW++ELR H DS I I+L+GNK
Sbjct: 566 DTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSHIVIMLVGNK 625
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
DL +RAVS +DA FAE + FF E SAL NV+ AF +L +IY VS+K L+ G+
Sbjct: 626 GDLRHLRAVSIDDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYQVVSRKALDIGD 685
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
D + G I+V G ++S +KK CS
Sbjct: 686 ---DPAALPKGQTINV--GTKDDVSAVKKAGCCS 714
>gi|15218719|ref|NP_174177.1| RAB GTPase-like protein A1I [Arabidopsis thaliana]
gi|75336857|sp|Q9S810.1|RAA1I_ARATH RecName: Full=Ras-related protein RABA1i; Short=AtRABA1i
gi|6560749|gb|AAF16749.1|AC010155_2 F3M18.2 [Arabidopsis thaliana]
gi|67633398|gb|AAY78624.1| putative Ras-related GTP-binding protein [Arabidopsis thaliana]
gi|332192870|gb|AEE30991.1| RAB GTPase-like protein A1I [Arabidopsis thaliana]
Length = 218
Score = 238 bits (606), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 119/214 (55%), Positives = 156/214 (72%), Gaps = 4/214 (1%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D DY+FKVV+ GDS VGKS +LSRFT+N+F DS++TIGVEF TR++ + KI+KAQIW
Sbjct: 8 DDYDYLFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRATIGVEFATRSIQCDDKIVKAQIW 67
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYD+T+ +F++V RW++ELR H D++I I+L+GNK
Sbjct: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMLVGNK 127
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
+DL +RA+S E+A FAE + FF E SAL NVD AF +L +IY VSKK LE G+
Sbjct: 128 ADLRHLRAISTEEAKAFAERENTFFMETSALEAVNVDNAFTEVLTQIYRVVSKKALEAGD 187
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
P G I+V G +IS +KK CS
Sbjct: 188 DPTTALP--KGQMINV--GGRDDISAVKKPGCCS 217
>gi|302822293|ref|XP_002992805.1| rab family GTPase [Selaginella moellendorffii]
gi|300139353|gb|EFJ06095.1| rab family GTPase [Selaginella moellendorffii]
Length = 216
Score = 238 bits (606), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 115/213 (53%), Positives = 160/213 (75%), Gaps = 5/213 (2%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK+IKAQIW
Sbjct: 7 DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSINVDGKLIKAQIW 66
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYD+T+ +F++V RW++EL+ H DS+I ++L+GNK
Sbjct: 67 DTAGQERYRAITSAYYRGAVGALLVYDVTRLVTFENVERWLKELKDHTDSNIVVMLVGNK 126
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
SDL +R VS ED ++E +GL+F E SAL NV+ +F ++L +IY VSKK L+ G
Sbjct: 127 SDLRHLRCVSTEDGQAYSEKEGLYFMETSALESVNVENSFKQILTQIYRVVSKKALDVG- 185
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLSTC 235
+ P + G K I+ + +++ KK+ C
Sbjct: 186 ---EDPSAVPG-KGQTINVSKDDVTATKKVGCC 214
>gi|3024502|sp|Q40194.1|RB11D_LOTJA RecName: Full=Ras-related protein Rab11D
gi|1370148|emb|CAA98180.1| RAB11D [Lotus japonicus]
Length = 218
Score = 238 bits (606), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 118/215 (54%), Positives = 157/215 (73%), Gaps = 6/215 (2%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FK+V+IGDS VGKS +LSRFTKNEF +SKSTIGVEF T+T+ ++ K++KAQIW
Sbjct: 8 DEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTLNVDAKVVKAQIW 67
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYD+T+R +F++ ARW++ELR H D +I ++LIGNK
Sbjct: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNIVVMLIGNK 127
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
SDL + AV ED FAE + L+F E SAL NV+ AF +L +IY VSK+ +E G+
Sbjct: 128 SDLRHLVAVPTEDGKSFAERESLYFMETSALEATNVENAFTEVLTQIYRIVSKRAVEAGD 187
Query: 203 -GKVDGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
G G P G I+V + S +K+ CS
Sbjct: 188 SGSSSGLPS-KGQTINVKEDS----SVLKRFGCCS 217
>gi|317139974|ref|XP_001817889.2| Ras-related protein Rab-11A [Aspergillus oryzae RIB40]
Length = 211
Score = 238 bits (606), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 113/183 (61%), Positives = 146/183 (79%)
Query: 20 MIPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKA 79
M D+ D++FKVV+IGDS VGKS +LSRFT+NEF D+KSTIGVEF TR++ ++ K IKA
Sbjct: 1 MANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDTKSTIGVEFATRSIQVDSKTIKA 60
Query: 80 QIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILI 139
QIWDTAGQERYRA+TSAYYRGA+GA++VYDI+K Q++D+V RW++ELR HADS+I I+L+
Sbjct: 61 QIWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYDNVNRWLKELRDHADSNIVIMLV 120
Query: 140 GNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELE 199
GNKSDL +RAV E+A +FA + L F E SAL+ NV+ AF +L EIY VS K L+
Sbjct: 121 GNKSDLRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALD 180
Query: 200 CGN 202
G+
Sbjct: 181 SGD 183
>gi|320594196|gb|EFX06599.1| Ras GTPase [Grosmannia clavigera kw1407]
Length = 211
Score = 238 bits (606), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 113/184 (61%), Positives = 146/184 (79%)
Query: 20 MIPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKA 79
M D+ D++FKVV+IGDS VGKS +LSRFT+NEF DSKSTIGVEF TR++ ++ K IKA
Sbjct: 1 MANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKA 60
Query: 80 QIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILI 139
QIWDTAGQERYRA+TSAYYRGA+GA++VYDI+K Q++++V RW++ELR HAD++I I+L+
Sbjct: 61 QIWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLV 120
Query: 140 GNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELE 199
GNKSDL +RAV E+A FA + L F E SAL+ NV+ AF +L EIY VS K L+
Sbjct: 121 GNKSDLRHLRAVPTEEAKAFASENHLSFIETSALDASNVELAFQNILTEIYRIVSSKALD 180
Query: 200 CGNG 203
G+G
Sbjct: 181 SGDG 184
>gi|226510193|ref|NP_001148694.1| LOC100282310 [Zea mays]
gi|194698036|gb|ACF83102.1| unknown [Zea mays]
gi|195621456|gb|ACG32558.1| ras-related protein RGP2 [Zea mays]
gi|413944911|gb|AFW77560.1| Ras protein RGP2 [Zea mays]
Length = 217
Score = 238 bits (606), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 110/170 (64%), Positives = 141/170 (82%)
Query: 27 YVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTAG 86
Y+FK+V+IGDS VGKS ILSRFT+N F DSKSTIGVEF T+++ ++GK IKAQIWDTAG
Sbjct: 11 YLFKMVLIGDSGVGKSNILSRFTRNHFSLDSKSTIGVEFATKSLQMDGKTIKAQIWDTAG 70
Query: 87 QERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDLV 146
QERYRA+TSAYYRGA+GA++VYDITKRQSFD+V RW+ ELR HADSSI I+++GNKSDL+
Sbjct: 71 QERYRAITSAYYRGAVGALLVYDITKRQSFDNVHRWLRELRDHADSSIVIMMVGNKSDLI 130
Query: 147 DMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKK 196
+RA+S ++ AE +GLFF E SA+ NV+ AF ++ E+YG V++K
Sbjct: 131 HLRAISEDEGKALAEKEGLFFLETSAMEAINVEQAFQTIMTEVYGIVNRK 180
>gi|164427985|ref|XP_956972.2| GTP-binding protein ypt3 [Neurospora crassa OR74A]
gi|18376163|emb|CAD21237.1| probable GTP-binding protein Drab11 [Neurospora crassa]
gi|157071962|gb|EAA27736.2| GTP-binding protein ypt3 [Neurospora crassa OR74A]
gi|336468176|gb|EGO56339.1| hypothetical protein NEUTE1DRAFT_130332 [Neurospora tetrasperma
FGSC 2508]
gi|350289578|gb|EGZ70803.1| putative GTP-binding protein Drab11 [Neurospora tetrasperma FGSC
2509]
Length = 214
Score = 238 bits (606), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 119/205 (58%), Positives = 154/205 (75%), Gaps = 1/205 (0%)
Query: 20 MIPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKA 79
M D+ D++FKVV+IGDS VGKS +LSRFT+NEF DSKSTIGVEF TR++ ++ K IKA
Sbjct: 1 MANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKA 60
Query: 80 QIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILI 139
QIWDTAGQERYRA+TSAYYRGA+GA++VYDI+K +F++V RW++ELR HAD +I I+L+
Sbjct: 61 QIWDTAGQERYRAITSAYYRGAVGALLVYDISKGVTFENVNRWLKELRDHADQNIVIMLV 120
Query: 140 GNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELE 199
GNKSDL +RAV EDA +FAE+ L F E SAL+ NV+ AF +L EIY VS K +
Sbjct: 121 GNKSDLRHLRAVPTEDAKKFAEENHLSFIETSALDATNVELAFQNILTEIYKIVSTKNFD 180
Query: 200 CG-NGKVDGPPMLAGSKIDVISGAD 223
G +G +G L+G I + A+
Sbjct: 181 NGPSGSNEGHQNLSGQSISLSQTAN 205
>gi|351722661|ref|NP_001235972.1| small GTP-binding protein [Glycine max]
gi|22597172|gb|AAN03473.1| small GTP-binding protein [Glycine max]
Length = 218
Score = 238 bits (606), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 116/214 (54%), Positives = 154/214 (71%), Gaps = 4/214 (1%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FK+V+IGDS VGKS +LSRFT+NEF +SKSTIGVEF T+++ I+ K+IKAQIW
Sbjct: 8 DEYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLNIDAKVIKAQIW 67
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYD+T+R +F++ ARW++ELR H D +I ++LIGNK
Sbjct: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNIVVMLIGNK 127
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
SDL + AV ED FAE + L+F E SAL NV+ AF +L +IY VSK+ +E G
Sbjct: 128 SDLRHLVAVPTEDGKSFAEKESLYFMETSALEATNVENAFTEVLSQIYRIVSKRTVEAGK 187
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
G I+V + S +KK+ CS
Sbjct: 188 NASSSAVPSKGQTINVKDDS----SVLKKIGCCS 217
>gi|405120692|gb|AFR95462.1| GTPase [Cryptococcus neoformans var. grubii H99]
Length = 213
Score = 238 bits (606), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 118/198 (59%), Positives = 153/198 (77%), Gaps = 3/198 (1%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK +KAQIWDTA
Sbjct: 8 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTVKAQIWDTA 67
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQERYRA+TSAYYRGA+GA++VYDI K Q++++V RW++ELR HAD++I I+L+GNKSDL
Sbjct: 68 GQERYRAITSAYYRGAVGALLVYDIAKHQTYENVTRWLKELRDHADANIVIMLVGNKSDL 127
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNGKV 205
+RAVS ++A +FA + GL F E SAL+ NV++AF +L +IY VS K LE +G V
Sbjct: 128 KHLRAVSTDEAKQFATENGLSFIETSALDASNVESAFQNILTDIYRIVSSKSLES-SGDV 186
Query: 206 DGPPMLAGSKIDVISGAD 223
P G I V AD
Sbjct: 187 IKPS--GGETILVAPTAD 202
>gi|356549876|ref|XP_003543316.1| PREDICTED: ras-related protein RABA1f-like [Glycine max]
Length = 218
Score = 238 bits (606), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 112/211 (53%), Positives = 157/211 (74%), Gaps = 1/211 (0%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
DY+FK+V+IGDS VGKS +LSRFT+NEF ++KSTIGVEF TR+V ++ K++KAQIWDTA
Sbjct: 8 DYLFKLVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRSVPVDSKLVKAQIWDTA 67
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQERYRA+TSAYYRGA+GA++VYD+T+ +F++V RW++ELR H ++ + ++L+GNK+DL
Sbjct: 68 GQERYRAITSAYYRGAVGALIVYDVTRHVTFENVERWLKELRDHTEAYVVVMLVGNKADL 127
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNGKV 205
+RAVS E+A E+AE + ++F E SAL NV AF +L +IY VS+K LE +
Sbjct: 128 RHLRAVSTEEATEYAEKENIYFMETSALESLNVGNAFVEVLTQIYNVVSRKTLETMDDDP 187
Query: 206 DGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
+ + G I VI D ++S +KK CS
Sbjct: 188 NSKALPKGETI-VIGTKDDDVSAVKKSGCCS 217
>gi|357135067|ref|XP_003569133.1| PREDICTED: ras-related protein RABA2a-like [Brachypodium
distachyon]
Length = 229
Score = 238 bits (606), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 111/174 (63%), Positives = 145/174 (83%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
++ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TRT+ + GKIIKAQIW
Sbjct: 17 EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLHVEGKIIKAQIW 76
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGALGAV+VYD++K +F++++RW++ELR HAD++IRI+L+GNK
Sbjct: 77 DTAGQERYRAITSAYYRGALGAVLVYDVSKPTTFENISRWLKELRDHADANIRIMLVGNK 136
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKK 196
+DL +RAV+ +D FAE +GL + E SAL NV+ AF +L +IY A+SKK
Sbjct: 137 TDLKHLRAVATDDGQSFAEAEGLSYIETSALEATNVEEAFQLILGDIYRAISKK 190
>gi|303319221|ref|XP_003069610.1| Ras-related protein Rab-11B , putative [Coccidioides posadasii C735
delta SOWgp]
gi|240109296|gb|EER27465.1| Ras-related protein Rab-11B , putative [Coccidioides posadasii C735
delta SOWgp]
gi|320040974|gb|EFW22907.1| ras GTPase Rab11 [Coccidioides posadasii str. Silveira]
gi|392865267|gb|EAS31048.2| small GTP-binding protein [Coccidioides immitis RS]
Length = 210
Score = 237 bits (605), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 112/184 (60%), Positives = 146/184 (79%)
Query: 20 MIPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKA 79
M D+ D++FKVV+IGDS VGKS +LSRFT+NEF DSKSTIGVEF TR++ ++ K IK+
Sbjct: 1 MANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKS 60
Query: 80 QIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILI 139
QIWDTAGQERYRA+TSAYYRGA+GA++VYDI+K Q++++V RW++ELR HADS+I I+L+
Sbjct: 61 QIWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADSNIVIMLV 120
Query: 140 GNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELE 199
GNKSDL +RAV E+A +FA D L F E SAL+ NV+ AF +L EI+ VS K L+
Sbjct: 121 GNKSDLRHLRAVPTEEAKQFASDNNLSFIETSALDASNVELAFQNILTEIFRIVSSKALD 180
Query: 200 CGNG 203
G+
Sbjct: 181 SGDS 184
>gi|15232652|ref|NP_190267.1| Ras-related protein RABA2c [Arabidopsis thaliana]
gi|297819266|ref|XP_002877516.1| hypothetical protein ARALYDRAFT_485055 [Arabidopsis lyrata subsp.
lyrata]
gi|3915842|sp|Q96283.4|RAA2C_ARATH RecName: Full=Ras-related protein RABA2c; Short=AtRABA2c; AltName:
Full=Ras-related protein Rab11A; Short=AtRab11A
gi|2598229|emb|CAA70112.1| Rab11 protein [Arabidopsis thaliana]
gi|5541676|emb|CAB51182.1| Rab11 protein [Arabidopsis thaliana]
gi|17529190|gb|AAL38821.1| putative GTP-binding protein Rab11 [Arabidopsis thaliana]
gi|20465471|gb|AAM20195.1| putative GTP-binding protein Rab11 [Arabidopsis thaliana]
gi|21593047|gb|AAM64996.1| GTP-binding protein Rab11 [Arabidopsis thaliana]
gi|297323354|gb|EFH53775.1| hypothetical protein ARALYDRAFT_485055 [Arabidopsis lyrata subsp.
lyrata]
gi|332644688|gb|AEE78209.1| Ras-related protein RABA2c [Arabidopsis thaliana]
Length = 217
Score = 237 bits (605), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 114/176 (64%), Positives = 139/176 (78%)
Query: 21 IPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQ 80
+ + DY+FK+V+IGDS VGKS ILSRFT+NEF +SKSTIGVEF TRT + GK IKAQ
Sbjct: 5 VDQEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTTQVEGKTIKAQ 64
Query: 81 IWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIG 140
IWDTAGQERYRA+TSAYYRGA+GA++VYDITKRQ+FD+V RW+ ELR HADS+I I++ G
Sbjct: 65 IWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAG 124
Query: 141 NKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKK 196
NKSDL +R+V+ ED AE +GL F E SAL NV+ AF +L EIY +SKK
Sbjct: 125 NKSDLNHLRSVAEEDGQSLAEKEGLSFLETSALEATNVEKAFQTILGEIYHIISKK 180
>gi|449468390|ref|XP_004151904.1| PREDICTED: ras-related protein RABA1f-like [Cucumis sativus]
gi|449529820|ref|XP_004171896.1| PREDICTED: ras-related protein RABA1f-like [Cucumis sativus]
Length = 217
Score = 237 bits (605), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 118/215 (54%), Positives = 160/215 (74%), Gaps = 7/215 (3%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D DY+FKVV+IGDS VGKS +LSRFT+NEF ++KSTIGVEF TR++ ++ KI+KAQIW
Sbjct: 8 DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRSIRVDDKIVKAQIW 67
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYD+T+ +F++V RW++ELR+H D +I I+L+GNK
Sbjct: 68 DTAGQERYRAITSAYYRGAVGALIVYDVTRHVTFENVERWLKELRSHTDHNIVIMLVGNK 127
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
+DL +RAVS EDA FAE + +F E SAL NV+ +F +L + Y VS+K L+ G
Sbjct: 128 ADLRHLRAVSTEDAQAFAERERTYFMETSALESFNVENSFTEVLTQTYRVVSRKILDIG- 186
Query: 203 GKVDGPPMLA-GSKIDVISGADLEISEMKKLSTCS 236
D P +L G ID+ G+ ++S +KK CS
Sbjct: 187 ---DDPTVLPKGQTIDI--GSKDDVSAVKKAGCCS 216
>gi|344233518|gb|EGV65390.1| ras-domain-containing protein [Candida tenuis ATCC 10573]
Length = 219
Score = 237 bits (605), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 109/183 (59%), Positives = 147/183 (80%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
+Y++K+V+IGDS VGKS +LSRFT++EF DS+STIGVEF TRT+ I+GK +KAQIWDTA
Sbjct: 13 EYLYKIVLIGDSGVGKSNLLSRFTRDEFNLDSRSTIGVEFATRTLEIDGKRVKAQIWDTA 72
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQERYRA+TSAYYRGA+GA++VYDI+K +S++ V+RW++EL+ HAD++I I L+GNKSDL
Sbjct: 73 GQERYRAITSAYYRGAVGALIVYDISKTESYESVSRWLKELKEHADANIVIELVGNKSDL 132
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNGKV 205
+RAV ++A FA + L F+EASALN DNVD +F +LL+ IY +SK +LE +
Sbjct: 133 DHLRAVPTDEAKNFANENSLLFTEASALNSDNVDLSFHQLLKNIYEMISKHQLETDDQPS 192
Query: 206 DGP 208
P
Sbjct: 193 AKP 195
>gi|224124790|ref|XP_002329949.1| predicted protein [Populus trichocarpa]
gi|222871971|gb|EEF09102.1| predicted protein [Populus trichocarpa]
Length = 216
Score = 237 bits (605), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 113/176 (64%), Positives = 140/176 (79%)
Query: 21 IPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQ 80
+ + DY+FK+V+IGDS VGKS ILSRFT+NEF +SKSTIGVEF TRT+ ++GK +KAQ
Sbjct: 5 VDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVDGKTVKAQ 64
Query: 81 IWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIG 140
IWDTAGQERYRA+TSAYYRGA+GA++VYDITKRQ+FD+V RW+ ELR HADS+I I++ G
Sbjct: 65 IWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAG 124
Query: 141 NKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKK 196
NKSDL +RAV ED AE +GL F E SAL N++ AF +L EIY +SKK
Sbjct: 125 NKSDLKHLRAVLEEDGHALAEKEGLSFLETSALEATNIEKAFQTILTEIYHIISKK 180
>gi|195997965|ref|XP_002108851.1| conserved hypothetical protein [Trichoplax adhaerens]
gi|190589627|gb|EDV29649.1| conserved hypothetical protein [Trichoplax adhaerens]
Length = 212
Score = 237 bits (605), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 116/215 (53%), Positives = 158/215 (73%), Gaps = 11/215 (5%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIW
Sbjct: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI K +++++ RW++ELR HAD++I I+L+GNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENIERWLKELRDHADANIVIMLVGNK 125
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELE--C 200
DL +RAV ++A FAE L F E SAL+ NV+TAF +L EIY VS+K+++
Sbjct: 126 CDLRHLRAVPTDEAKNFAEKNTLSFIETSALDSTNVETAFQNILTEIYHIVSQKQIKDAP 185
Query: 201 GNGKVDGPPMLAGSKIDVISGADLEISEMKKLSTC 235
N ++ P++ G +D S++KK C
Sbjct: 186 QNSEISSQPIVVGPTVD---------SDVKKKPQC 211
>gi|134111857|ref|XP_775464.1| hypothetical protein CNBE1790 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|321259045|ref|XP_003194243.1| GTPase of the Ypt/Rab family [Cryptococcus gattii WM276]
gi|50258123|gb|EAL20817.1| hypothetical protein CNBE1790 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|317460714|gb|ADV22456.1| GTPase of the Ypt/Rab family involved in intra-Golgi traffic or the
budding of post-Golgi vesicles from the trans-Golgi,
putative; Ypt31p [Cryptococcus gattii WM276]
Length = 213
Score = 237 bits (605), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 118/198 (59%), Positives = 153/198 (77%), Gaps = 3/198 (1%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK +KAQIWDTA
Sbjct: 8 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTVKAQIWDTA 67
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQERYRA+TSAYYRGA+GA++VYDI K Q++++V RW++ELR HAD++I I+L+GNKSDL
Sbjct: 68 GQERYRAITSAYYRGAVGALLVYDIAKHQTYENVTRWLKELRDHADANIVIMLVGNKSDL 127
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNGKV 205
+RAVS ++A +FA + GL F E SAL+ NV++AF +L +IY VS K LE +G V
Sbjct: 128 KHLRAVSTDEAKQFATENGLSFIETSALDASNVESAFQNILTDIYRIVSSKSLES-SGDV 186
Query: 206 DGPPMLAGSKIDVISGAD 223
P G I V AD
Sbjct: 187 IKPS--GGETILVAPTAD 202
>gi|255634658|gb|ACU17691.1| unknown [Glycine max]
Length = 228
Score = 237 bits (605), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 118/217 (54%), Positives = 158/217 (72%), Gaps = 7/217 (3%)
Query: 25 IDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDT 84
IDY+FK+V+ GDS VGKSQ+L+RF KNEF SK TIG+EF TRTV ++ K++KAQIWDT
Sbjct: 12 IDYMFKIVMTGDSGVGKSQLLNRFVKNEFHMKSKPTIGMEFLTRTVVMDHKLVKAQIWDT 71
Query: 85 AGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSD 144
AGQERY+A+T+AYYRGA GA++ YDITK+Q+FDHV +W++ELR HAD +I ++L+GNKSD
Sbjct: 72 AGQERYQAITTAYYRGATGALLAYDITKQQTFDHVEKWLDELRIHADKNILVMLVGNKSD 131
Query: 145 LVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL-----E 199
L +RAV E A +FA+ +GLFF E SAL+ NV++AF LL ++Y VS+K + E
Sbjct: 132 LSSLRAVPTEVARDFAQQEGLFFLETSALDSSNVESAFIGLLSQVYRTVSRKHILVDGHE 191
Query: 200 CGNGKVDGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
KV+ L G+KI V S + K+ + CS
Sbjct: 192 SNWDKVNLE--LEGTKIKVPSQEPECQNAKKRFNCCS 226
>gi|260949821|ref|XP_002619207.1| hypothetical protein CLUG_00366 [Clavispora lusitaniae ATCC 42720]
gi|238846779|gb|EEQ36243.1| hypothetical protein CLUG_00366 [Clavispora lusitaniae ATCC 42720]
Length = 220
Score = 237 bits (605), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 111/191 (58%), Positives = 152/191 (79%), Gaps = 4/191 (2%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
+Y++K+V+IGDS VGKS +LSRFT++EF +S+STIGVEF TRT+ I+GK +KAQIWDTA
Sbjct: 13 EYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRVKAQIWDTA 72
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQERYRA+TSAYYRGA+GA++VYDI+K +S++ V+RW++ELR HAD++I I L+GNKSDL
Sbjct: 73 GQERYRAITSAYYRGAVGALIVYDISKTESYESVSRWLKELREHADANIVIELVGNKSDL 132
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELEC----G 201
+RAV E+A FA + L F+EASAL+ DNVD +F +LL+ IY +SK +L+ G
Sbjct: 133 DHLRAVPTEEAKSFATENNLLFTEASALSSDNVDLSFHQLLKNIYEMISKHQLDTNDTVG 192
Query: 202 NGKVDGPPMLA 212
+ K G P ++
Sbjct: 193 SSKPSGGPTIS 203
>gi|209878955|ref|XP_002140918.1| Rab11 protein [Cryptosporidium muris RN66]
gi|209556524|gb|EEA06569.1| Rab11 protein, putative [Cryptosporidium muris RN66]
Length = 220
Score = 237 bits (605), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 116/219 (52%), Positives = 163/219 (74%), Gaps = 3/219 (1%)
Query: 19 NMIPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIK 78
N+ + DY++K+V+IGDS VGKS +LSRFT++EF +SKSTIGVEF T+++ GK+IK
Sbjct: 2 NVKDEYYDYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESKSTIGVEFATKSIMTQGKVIK 61
Query: 79 AQIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIIL 138
AQIWDTAGQERYRA+TSAYYRGA+GA++VYDI+KR SF++V RW++ELR HAD +I ++L
Sbjct: 62 AQIWDTAGQERYRAITSAYYRGAVGALLVYDISKRSSFENVERWLKELRDHADPNIVVLL 121
Query: 139 IGNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL 198
+GNKSDL +RAV+ E+A F+E +G+ EASALN NV+ AF R+L EIY S++++
Sbjct: 122 VGNKSDLKHLRAVTQEEACMFSEKEGMACMEASALNSSNVEQAFHRILSEIYMLRSERQI 181
Query: 199 ECGN--GKVDGPPMLAGSKIDVISGADLEISEMKKLSTC 235
+ K P G ++D + DL+ +K+ S+C
Sbjct: 182 ANQHDLTKTTLPIGSQGVRVDPVR-VDLDSKGLKRKSSC 219
>gi|259489417|tpe|CBF89672.1| TPA: Ras GTPase similar to RAB11B (Eurofung) [Aspergillus nidulans
FGSC A4]
Length = 210
Score = 237 bits (605), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 114/184 (61%), Positives = 145/184 (78%)
Query: 20 MIPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKA 79
M D+ D++FKVV+IGDS GKS +LSRFT+NEF DSKSTIGVEF TR++ ++ K IKA
Sbjct: 1 MANDEYDFLFKVVLIGDSGTGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKA 60
Query: 80 QIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILI 139
QIWDTAGQERYRA+TSAYYRGA+GA++VYDI+K Q++D+V RW++ELR HADS+I I+L+
Sbjct: 61 QIWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYDNVNRWLKELRDHADSNIVIMLV 120
Query: 140 GNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELE 199
GNKSDL +RAV E+A +FA + L F E SAL+ NV+ AF +L EIY VS K LE
Sbjct: 121 GNKSDLRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALE 180
Query: 200 CGNG 203
+G
Sbjct: 181 GESG 184
>gi|67078856|gb|AAY64452.1| small GTPase Rab11-2 [Gracilaria lemaneiformis]
Length = 214
Score = 237 bits (605), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 115/186 (61%), Positives = 145/186 (77%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGD+ VGKS +LSRFT+NEF +SKSTIG EF TR++ GKIIKAQIW
Sbjct: 6 DEYDYLFKVVLIGDAGVGKSNLLSRFTRNEFSLESKSTIGAEFATRSIQCEGKIIKAQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDITK+ SFD+V RW++EL+ HAD++I I+L+GNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGALLVYDITKKDSFDNVQRWLKELKDHADANIVIMLVGNK 125
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
SDL ++AV+ +DA FAE GL F E SAL+ V+ AF +L EIY SKK LE G+
Sbjct: 126 SDLQHLKAVTTDDASAFAESNGLSFIETSALDNSTVEEAFRSILSEIYRLGSKKALEKGS 185
Query: 203 GKVDGP 208
P
Sbjct: 186 TSNFAP 191
>gi|115462975|ref|NP_001055087.1| Os05g0280200 [Oryza sativa Japonica Group]
gi|109940138|sp|Q40723.2|RGP2_ORYSJ RecName: Full=Ras-related protein RGP2; AltName: Full=GTP-binding
regulatory protein RGP2
gi|46485881|gb|AAS98506.1| putative GTP-binding protein Rab11 [Oryza sativa Japonica Group]
gi|113578638|dbj|BAF17001.1| Os05g0280200 [Oryza sativa Japonica Group]
gi|125551654|gb|EAY97363.1| hypothetical protein OsI_19285 [Oryza sativa Indica Group]
gi|149390917|gb|ABR25476.1| gtp-binding regulatory protein rgp2 [Oryza sativa Indica Group]
gi|222630958|gb|EEE63090.1| hypothetical protein OsJ_17898 [Oryza sativa Japonica Group]
Length = 217
Score = 237 bits (604), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 111/170 (65%), Positives = 140/170 (82%)
Query: 27 YVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTAG 86
Y+FK+V+IGDS VGKS ILSRFT+N F DSKSTIGVEF T+++ + GK IKAQIWDTAG
Sbjct: 11 YLFKMVLIGDSGVGKSNILSRFTRNHFSLDSKSTIGVEFATKSLQMEGKTIKAQIWDTAG 70
Query: 87 QERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDLV 146
QERYRA+TSAYYRGA+GA++VYDITKRQSFD+V RW+ ELR HADSSI I+++GNKSDL+
Sbjct: 71 QERYRAITSAYYRGAVGALLVYDITKRQSFDNVHRWLRELRDHADSSIVIMMVGNKSDLI 130
Query: 147 DMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKK 196
+RAVS ++ AE +GLFF E SA+ NV+ AF ++ E+YG V++K
Sbjct: 131 HLRAVSEDEGKALAEKEGLFFLETSAMEAVNVEEAFQTIITEVYGIVNRK 180
>gi|260820529|ref|XP_002605587.1| hypothetical protein BRAFLDRAFT_266781 [Branchiostoma floridae]
gi|229290921|gb|EEN61597.1| hypothetical protein BRAFLDRAFT_266781 [Branchiostoma floridae]
Length = 217
Score = 237 bits (604), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 120/213 (56%), Positives = 155/213 (72%), Gaps = 3/213 (1%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIW
Sbjct: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI K ++++V RW++ELR HAD++I I+L+GNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNK 125
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
SDL +RAV ++A FAE L F E SAL+ NV+TAF +L EIY VS+K++
Sbjct: 126 SDLRHLRAVPTDEAKAFAEKNSLSFIETSALDSTNVETAFQNILTEIYHIVSQKQIRDSP 185
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLSTC 235
G D P I V D + KKL+ C
Sbjct: 186 GD-DESPSTNVQTITVAPTTDADTK--KKLACC 215
>gi|449438915|ref|XP_004137233.1| PREDICTED: ras-related protein Rab11D-like [Cucumis sativus]
Length = 217
Score = 237 bits (604), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 116/197 (58%), Positives = 150/197 (76%), Gaps = 2/197 (1%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D DY+FKVV+IGDS VGKS +LSRFTKNEF +SKSTIGVEF TRT+ ++GK+IKAQIW
Sbjct: 8 DDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGKVIKAQIW 67
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYD+T+ +F++V RW++EL+ H DS+I ++L+GNK
Sbjct: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIVVMLVGNK 127
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECG- 201
SDL + AV ED +AE + L+F E SAL NV+ AF +L +IY VSKK +E G
Sbjct: 128 SDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHIVSKKAVEGGE 187
Query: 202 NGKVDGPPMLAGSKIDV 218
NG P G KI++
Sbjct: 188 NGSASAVPA-QGEKINI 203
>gi|225434794|ref|XP_002282136.1| PREDICTED: ras-related protein Rab2BV [Vitis vinifera]
gi|147777473|emb|CAN62732.1| hypothetical protein VITISV_031984 [Vitis vinifera]
Length = 217
Score = 237 bits (604), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 114/178 (64%), Positives = 140/178 (78%)
Query: 19 NMIPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIK 78
N + + DY+FK+V+IGDS VGKS ILSRFT+NEF +SKSTIGVEF TRT+ I+GK +K
Sbjct: 3 NRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQIDGKTVK 62
Query: 79 AQIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIIL 138
AQIWDTAGQERYRA+TSAYYRGA+GA++VYDITKRQ+FD+V RW+ ELR HADS+I I++
Sbjct: 63 AQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMM 122
Query: 139 IGNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKK 196
GNK DL +RAVS ED AE + L F E SAL N++ AF +L EIY +SKK
Sbjct: 123 AGNKCDLKHLRAVSEEDGQGLAEREELSFLETSALEATNIEKAFQTILTEIYHIISKK 180
>gi|351728017|ref|NP_001235133.1| uncharacterized protein LOC100499980 [Glycine max]
gi|255628259|gb|ACU14474.1| unknown [Glycine max]
Length = 216
Score = 237 bits (604), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 111/176 (63%), Positives = 143/176 (81%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
++ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TRT+ + G +KAQIW
Sbjct: 7 EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGGTVKAQIW 66
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGALGA++VYD+TK +F++V+RW++ELR HAD++I I+LIGNK
Sbjct: 67 DTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADANIVIMLIGNK 126
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL 198
+DL +RAV+ EDA ++E +GL F E SAL NV+ AF +L EIY +SKK L
Sbjct: 127 TDLKHLRAVATEDAQGYSEKEGLSFIETSALEATNVEKAFQTILAEIYRIISKKSL 182
>gi|384484908|gb|EIE77088.1| rab11 protein [Rhizopus delemar RA 99-880]
Length = 211
Score = 237 bits (604), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 111/183 (60%), Positives = 146/183 (79%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
++ DY+FKVV+IGDS VGK+ +LSRFT+NEF +SKSTIGVEF TR++ ++ K+IKAQIW
Sbjct: 5 EEYDYLFKVVLIGDSGVGKTNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKMIKAQIW 64
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI+K +++ V RW++ELR HADS+I I+L+GNK
Sbjct: 65 DTAGQERYRAITSAYYRGAVGALLVYDISKHSTYESVERWLKELRDHADSNIVIMLVGNK 124
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
SDL +RAV ++A +FA D GL F E SAL+ NVD +F ++L EIY VS K LE N
Sbjct: 125 SDLRHLRAVPTDEAKQFASDNGLSFIETSALDATNVDQSFQQILTEIYRIVSNKALESSN 184
Query: 203 GKV 205
+
Sbjct: 185 NTI 187
>gi|452986440|gb|EME86196.1| hypothetical protein MYCFIDRAFT_72266 [Pseudocercospora fijiensis
CIRAD86]
Length = 211
Score = 237 bits (604), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 122/216 (56%), Positives = 154/216 (71%), Gaps = 5/216 (2%)
Query: 20 MIPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKA 79
M D+ D++FKVV+IGDS VGKS +LSRFT+NEF DSKSTIGVEF TR++ ++ K IKA
Sbjct: 1 MANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKA 60
Query: 80 QIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILI 139
QIWDTAGQERYRA+TSAYYRGA+GA++VYDI+K Q+F +V RW++ELR HAD++I I+L+
Sbjct: 61 QIWDTAGQERYRAITSAYYRGAVGALLVYDISKEQTFGNVQRWLKELRDHADTNIVIMLV 120
Query: 140 GNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELE 199
GNKSDL +RAV +DA FA + GL F E SAL+ NV+ AF + L EIY VS K L+
Sbjct: 121 GNKSDLRHLRAVPTDDAKAFAAENGLSFIETSALDASNVELAFQQELTEIYRIVSSKALD 180
Query: 200 CGNGKVDGPPMLAGSKIDVISGADLEISEMKKLSTC 235
GP G+ I + A E KK C
Sbjct: 181 ---QDTSGPAPGQGTSIPL--SASTPAGEAKKGQCC 211
>gi|224101065|ref|XP_002312127.1| predicted protein [Populus trichocarpa]
gi|222851947|gb|EEE89494.1| predicted protein [Populus trichocarpa]
Length = 216
Score = 236 bits (603), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 114/173 (65%), Positives = 139/173 (80%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
DY+FK+V+IGDS VGKS ILSRFT+NEF +SKSTIGVEF TRT+ + GK +KAQIWDTA
Sbjct: 10 DYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTA 69
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQERYRA+TSAYYRGA+GA++VYDITKRQ+FD+V RW+ ELR HADS+I I+L GNK+DL
Sbjct: 70 GQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMLAGNKTDL 129
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL 198
+R+VSAEDA AE + L E SAL NV+ AF +L +IY +SKK L
Sbjct: 130 NHLRSVSAEDAQMLAEKECLSCLETSALEASNVEKAFQTILLDIYQIISKKAL 182
>gi|224116364|ref|XP_002331964.1| predicted protein [Populus trichocarpa]
gi|222874741|gb|EEF11872.1| predicted protein [Populus trichocarpa]
Length = 217
Score = 236 bits (603), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 118/214 (55%), Positives = 159/214 (74%), Gaps = 5/214 (2%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++ KI+KAQIW
Sbjct: 8 DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKIVKAQIW 67
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYD+T+ +F++V RW++ELR H D++ I+L+GNK
Sbjct: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANNVIMLVGNK 127
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
+DL +RAV+ EDA FAE + FF E SAL NV+ AF +L +IY VS+K L+ G+
Sbjct: 128 ADLRHLRAVATEDAKGFAERESTFFMETSALESMNVENAFTEVLTQIYRVVSRKALDVGD 187
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
D + G I+V G+ ++S +KK CS
Sbjct: 188 ---DSTYLPKGQTINV--GSRDDVSAVKKAGCCS 216
>gi|393220787|gb|EJD06273.1| ras-domain-containing protein [Fomitiporia mediterranea MF3/22]
Length = 215
Score = 236 bits (603), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 117/185 (63%), Positives = 144/185 (77%), Gaps = 2/185 (1%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
DY+FKVV+IGDS VGKS +LSRFT+NEF DSKSTIGVEF TRTV ++GK +KAQIWDTA
Sbjct: 10 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRTVQVDGKTVKAQIWDTA 69
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQERYRA+TSAYYRGA+GA++VYDI K+ +FD+V RW++ELR HADS+I I+L+GNKSDL
Sbjct: 70 GQERYRAITSAYYRGAVGALLVYDIAKQSTFDNVQRWLKELRDHADSNIVIMLVGNKSDL 129
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELE--CGNG 203
+RAV + A FAE+ L F E SAL+ NV+ AF +L +IY VS K L+ G G
Sbjct: 130 KHLRAVLTDVAQSFAEENNLSFMETSALDASNVEAAFQSILTDIYRIVSAKALDQNQGPG 189
Query: 204 KVDGP 208
GP
Sbjct: 190 LTPGP 194
>gi|327300815|ref|XP_003235100.1| GTP-binding protein ypt3 [Trichophyton rubrum CBS 118892]
gi|326462452|gb|EGD87905.1| GTP-binding protein ypt3 [Trichophyton rubrum CBS 118892]
gi|326468660|gb|EGD92669.1| GTP-binding protein ypt3 [Trichophyton tonsurans CBS 112818]
gi|326485125|gb|EGE09135.1| GTP-binding protein ypt3 [Trichophyton equinum CBS 127.97]
Length = 210
Score = 236 bits (603), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 111/187 (59%), Positives = 147/187 (78%)
Query: 20 MIPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKA 79
M D+ D++FKVV+IGDS VGKS +LSRFT+NEF DSKSTIGVEF TR++ ++ K IK+
Sbjct: 1 MANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKS 60
Query: 80 QIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILI 139
QIWDTAGQERYRA+TSAYYRGA+GA++VYD++K Q++++V RW++ELR HADS+I I+L+
Sbjct: 61 QIWDTAGQERYRAITSAYYRGAVGALLVYDVSKHQTYENVTRWLKELRDHADSNIVIMLV 120
Query: 140 GNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELE 199
GNKSDL +RAV E+A +FA + L F E SAL+ NV+ AF +L EI+ VS K LE
Sbjct: 121 GNKSDLRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIFRIVSSKALE 180
Query: 200 CGNGKVD 206
G+ +
Sbjct: 181 SGDSSAN 187
>gi|315048511|ref|XP_003173630.1| hypothetical protein MGYG_03805 [Arthroderma gypseum CBS 118893]
gi|311341597|gb|EFR00800.1| hypothetical protein MGYG_03805 [Arthroderma gypseum CBS 118893]
Length = 210
Score = 236 bits (603), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 111/187 (59%), Positives = 147/187 (78%)
Query: 20 MIPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKA 79
M D+ D++FKVV+IGDS VGKS +LSRFT+NEF DSKSTIGVEF TR++ ++ K IK+
Sbjct: 1 MANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKS 60
Query: 80 QIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILI 139
QIWDTAGQERYRA+TSAYYRGA+GA++VYD++K Q++++V RW++ELR HADS+I I+L+
Sbjct: 61 QIWDTAGQERYRAITSAYYRGAVGALLVYDVSKHQTYENVTRWLKELRDHADSNIVIMLV 120
Query: 140 GNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELE 199
GNKSDL +RAV E+A +FA + L F E SAL+ NV+ AF +L EI+ VS K LE
Sbjct: 121 GNKSDLRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIFRIVSSKALE 180
Query: 200 CGNGKVD 206
G+ +
Sbjct: 181 SGDSSAN 187
>gi|302901691|ref|XP_003048490.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256729423|gb|EEU42777.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 212
Score = 236 bits (603), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 119/212 (56%), Positives = 157/212 (74%), Gaps = 2/212 (0%)
Query: 20 MIPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKA 79
M D+ D++FKVV+IGDS VGKS +LSRFT+NEF DSKSTIGVEF TR++ ++ K IKA
Sbjct: 1 MANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKA 60
Query: 80 QIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILI 139
QIWDTAGQERYRA+TSAYYRGA+GA++VYDI+K Q++++V RW++ELR HAD++I I+L+
Sbjct: 61 QIWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLV 120
Query: 140 GNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELE 199
GNKSDL +RAV E+A FA + L F E SAL+ NV+ AF +L EIY VS K L+
Sbjct: 121 GNKSDLRHLRAVPTEEAKSFASENHLSFIETSALDASNVELAFQNILTEIYRIVSSKALD 180
Query: 200 CGNGKVDGPPMLAGSKIDVISGADLEISEMKK 231
G+ + AG+ I + AD + S+ K
Sbjct: 181 SGDSA--QATIGAGTNISLSKPADDDASKGGK 210
>gi|147788245|emb|CAN75965.1| hypothetical protein VITISV_014527 [Vitis vinifera]
Length = 217
Score = 236 bits (603), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 119/214 (55%), Positives = 156/214 (72%), Gaps = 5/214 (2%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++ KI+KAQIW
Sbjct: 8 DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKIVKAQIW 67
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYD+T+ +F++V RW++ELR H DS I I+L+GNK
Sbjct: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSHIVIMLVGNK 127
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
DL + AVS +DA FAE + FF E SAL NV+ AF +L +IY VS+K L+ G+
Sbjct: 128 GDLRHLXAVSIDDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYQVVSRKALDIGD 187
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
D + G I+V G ++S +KK CS
Sbjct: 188 ---DPAALPKGQTINV--GTKDDVSAVKKAGCCS 216
>gi|299473109|emb|CBN78685.1| Rab11A, RAB family GTPase [Ectocarpus siliculosus]
Length = 219
Score = 236 bits (603), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 117/215 (54%), Positives = 155/215 (72%), Gaps = 2/215 (0%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF T+++ GK IKAQIW
Sbjct: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIQTEGKTIKAQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI+K +F++V RW++ELR HA+++I ++LIGNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGALLVYDISKHVTFENVERWLKELRDHAEANIVVMLIGNK 125
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
SDL +R V+ E+A+EFA+ L F E SAL+ VD+AF R+L EIY +S+K +
Sbjct: 126 SDLRHLRTVTHEEAMEFAKKHNLAFLETSALDASGVDSAFQRILTEIYRLMSRKTIAANT 185
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLSTCSC 237
GP + G I + S D + K SC
Sbjct: 186 AT--GPDLSRGETIALSSARDDASNRSKSSCAGSC 218
>gi|242053931|ref|XP_002456111.1| hypothetical protein SORBIDRAFT_03g030650 [Sorghum bicolor]
gi|241928086|gb|EES01231.1| hypothetical protein SORBIDRAFT_03g030650 [Sorghum bicolor]
Length = 219
Score = 236 bits (603), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 116/215 (53%), Positives = 156/215 (72%), Gaps = 4/215 (1%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
++ DY+FKVV+IGDS VGKS +LSRF ++EF +++STIGVEF T+TV ++ K++KAQIW
Sbjct: 9 EEYDYLFKVVLIGDSGVGKSNLLSRFARDEFSLETRSTIGVEFATKTVQVDDKLVKAQIW 68
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA+VVYD+T+R +FD+ RW+ ELR H D++I ++L+GNK
Sbjct: 69 DTAGQERYRAITSAYYRGAVGALVVYDVTRRITFDNAERWLRELRDHTDANIVVMLVGNK 128
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
+DL +RAV+ EDA FAE G F E SAL+ NVD AF +L++IY VS+ L+ G
Sbjct: 129 ADLRHLRAVTPEDAAAFAERHGTFSMETSALDATNVDRAFAEVLRQIYHVVSRNALDIGE 188
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLSTCSC 237
PP G IDV + D E+S + CS
Sbjct: 189 DPA-APPR--GKTIDVGAAKD-EVSPVNTGGCCSA 219
>gi|449015743|dbj|BAM79145.1| small GTP-binding protein of Rab family [Cyanidioschyzon merolae
strain 10D]
Length = 224
Score = 236 bits (603), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 111/183 (60%), Positives = 147/183 (80%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FK+V+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR+V +GK+IKAQIW
Sbjct: 7 DEYDYLFKIVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSVQTDGKVIKAQIW 66
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI+KR SF++ RW++ELR HAD +I I+L+GNK
Sbjct: 67 DTAGQERYRAITSAYYRGAVGALLVYDISKRSSFENAERWLKELRDHADQNIVIMLVGNK 126
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
SDL +RAV+ E+ ++A+ +GL F E SAL+ +V+ AF R+L +IY V K+ L G+
Sbjct: 127 SDLKHLRAVTTEEGQQYADARGLSFIETSALDASHVEEAFVRILTDIYRLVHKRHLASGD 186
Query: 203 GKV 205
V
Sbjct: 187 PTV 189
>gi|294463635|gb|ADE77345.1| unknown [Picea sitchensis]
Length = 223
Score = 236 bits (603), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 113/213 (53%), Positives = 161/213 (75%), Gaps = 4/213 (1%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
DY+FK+V+IGDSAVGKS +L+R+ +NEF+ +SKSTIGVEFQT+T+ I+GK IKAQIWDTA
Sbjct: 12 DYLFKIVLIGDSAVGKSNLLARYARNEFYPNSKSTIGVEFQTQTMQIDGKEIKAQIWDTA 71
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQER+RAVTSAYYRGA+GA+VVYDI++RQ+FD+++RW++EL H+D ++ +++GNK+DL
Sbjct: 72 GQERFRAVTSAYYRGAVGALVVYDISRRQTFDNISRWLDELHTHSDMNVVTVIVGNKTDL 131
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNGKV 205
+D R VS E+ AE Q ++F E SAL+ NV AF +++EIY +S+K L C K+
Sbjct: 132 LDAREVSTEEGAALAEAQNIYFVETSALDSTNVQLAFQTVVKEIYNILSRKVLSCQEQKL 191
Query: 206 DGPPMLAGSKIDVISGADLEIS--EMKKLSTCS 236
+ ++ K V+ A+ E + + KL CS
Sbjct: 192 ESK--ISNGKTVVLQEAESESTAKQTGKLWCCS 222
>gi|147802502|emb|CAN73117.1| hypothetical protein VITISV_002485 [Vitis vinifera]
Length = 215
Score = 236 bits (602), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 123/216 (56%), Positives = 154/216 (71%), Gaps = 6/216 (2%)
Query: 21 IPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQ 80
+ + DY+FK+V+IGDS VGKS ILSRFT+NE +SKSTIGVEF TRT+ + GK +KAQ
Sbjct: 5 VDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEXCLESKSTIGVEFATRTLQVEGKTVKAQ 64
Query: 81 IWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIG 140
IWDTAGQERYRA+TSAYYRGA+GA++VYDITKRQ+F++V RW+ ELR HADS+I I++ G
Sbjct: 65 IWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFENVQRWLRELRDHADSNIVIMMAG 124
Query: 141 NKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELEC 200
NKSDL +RAVS +DA AE +GL F E SAL NV+ AF +L +IY +SKK L
Sbjct: 125 NKSDLNHLRAVSGDDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAA 184
Query: 201 GNGKVDGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
P G+ I+V DL M K + CS
Sbjct: 185 QEAASINLPH--GTTINV---GDLS-GNMNKRTCCS 214
>gi|344303781|gb|EGW34030.1| GTP-binding protein YPT32/YPT11 [Spathaspora passalidarum NRRL
Y-27907]
Length = 222
Score = 236 bits (602), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 112/194 (57%), Positives = 151/194 (77%), Gaps = 1/194 (0%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
+Y++K+V+IGDS VGKS +LSRFT++EF +S+STIGVEF TRT+ I+GK +KAQIWDTA
Sbjct: 13 EYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRVKAQIWDTA 72
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQERYRA+TSAYYRGA+GA++VYDI K +S++ V+RW++EL+ HADS+I I L+GNKSDL
Sbjct: 73 GQERYRAITSAYYRGAVGALIVYDIAKTESYESVSRWLKELKEHADSNIVIELVGNKSDL 132
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECG-NGK 204
+RAV E+A FA++ L F EASAL+ DNVD +F +LL+ IY +SK +L+ G
Sbjct: 133 DHLRAVPTEEAKNFAQENNLLFIEASALSSDNVDLSFHQLLKNIYEMISKHQLDTNEQGG 192
Query: 205 VDGPPMLAGSKIDV 218
V+ P G I +
Sbjct: 193 VNKPTTAGGPTISL 206
>gi|414881073|tpg|DAA58204.1| TPA: ras protein Rab11B [Zea mays]
Length = 220
Score = 236 bits (602), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 115/214 (53%), Positives = 157/214 (73%), Gaps = 4/214 (1%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
++ DY+FKVV+IGDS VGKS +LSRF ++EF +++STIGVEF T+TV ++ K++KAQIW
Sbjct: 9 EEYDYLFKVVLIGDSGVGKSNLLSRFARDEFSLETRSTIGVEFATKTVQVDDKLVKAQIW 68
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA+VVYD+++R +FD+ RW+ ELR H D++I ++L+GNK
Sbjct: 69 DTAGQERYRAITSAYYRGAVGALVVYDVSRRTTFDNAERWLRELRDHTDANIVVMLVGNK 128
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
+DL +RAVS EDA FAE G F E SAL+ NV+ AF +L++IY VS+ L+ G+
Sbjct: 129 ADLRHLRAVSPEDAAAFAERHGTFSMETSALDATNVERAFAEVLRQIYHVVSRNALDIGD 188
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
PP G IDV + D E+S + CS
Sbjct: 189 DPA-APPR--GKTIDVSAAKD-EVSPVNAGGCCS 218
>gi|212723804|ref|NP_001132839.1| uncharacterized protein LOC100194331 [Zea mays]
gi|242096112|ref|XP_002438546.1| hypothetical protein SORBIDRAFT_10g021730 [Sorghum bicolor]
gi|194695542|gb|ACF81855.1| unknown [Zea mays]
gi|195624594|gb|ACG34127.1| ras-related protein RIC2 [Zea mays]
gi|195643338|gb|ACG41137.1| ras-related protein RIC2 [Zea mays]
gi|241916769|gb|EER89913.1| hypothetical protein SORBIDRAFT_10g021730 [Sorghum bicolor]
gi|413943895|gb|AFW76544.1| Ras protein RIC2 [Zea mays]
Length = 217
Score = 236 bits (602), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 115/214 (53%), Positives = 156/214 (72%), Gaps = 6/214 (2%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK++KAQIW
Sbjct: 9 DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKVVKAQIW 68
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYD+T+ +F++V RW++ELR H D +I ++L+GNK
Sbjct: 69 DTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLKELRDHTDPNIVVMLVGNK 128
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
SDL + AV ++ FAE + L+F E SAL NV+ AF +L +IY VSK+ +E G
Sbjct: 129 SDLRHLVAVQTDEGKAFAERESLYFMETSALESTNVENAFAEVLTQIYRIVSKRAVEAGE 188
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
GP G KI++ ++S +KK CS
Sbjct: 189 DAASGPG--KGEKINIKD----DVSAVKKGGCCS 216
>gi|402225755|gb|EJU05816.1| ras-domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 213
Score = 236 bits (602), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 112/177 (63%), Positives = 146/177 (82%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
DY+FKVV+IGDS VGKS +LSRFT+NEF DSKSTIGVEF TR++ ++GK++KAQIWDTA
Sbjct: 8 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNPDSKSTIGVEFATRSLEVDGKVVKAQIWDTA 67
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQERYRA+TSAYYRGA+GA++VYDI+K+ +F +VARW++ELR HADSSI ++L+GNKSDL
Sbjct: 68 GQERYRAITSAYYRGAVGALLVYDISKQPTFANVARWLKELRDHADSSIVVMLVGNKSDL 127
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
+RAV ++A +FA D GL F E SAL+ NV+ AF ++L +IY VS K L+ +
Sbjct: 128 KHLRAVLTDEAKQFAMDNGLSFIETSALDASNVEAAFQQILTDIYRIVSSKSLDAAD 184
>gi|19920111|gb|AAM08543.1|AC079935_15 Putative Ras-related protein Rab [Oryza sativa Japonica Group]
Length = 202
Score = 236 bits (602), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 125/212 (58%), Positives = 149/212 (70%), Gaps = 15/212 (7%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
+K+DYVFKVV+IGDSAVGKSQIL+RF +NEF DSK+TIGVEFQTRT+ I+ K
Sbjct: 5 EKVDYVFKVVLIGDSAVGKSQILARFARNEFSIDSKATIGVEFQTRTLLIDHK------- 57
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
YRAVTSAYYRGALGA++VYDITKRQSFDH+ RW+EELR HAD +I I+L+GNK
Sbjct: 58 -------YRAVTSAYYRGALGALLVYDITKRQSFDHIPRWLEELRGHADKNIVIMLVGNK 110
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
SDL D RAVS EDA EFAE + LFF E SAL NV+ AF +L EI+ SKK +
Sbjct: 111 SDLEDERAVSTEDAKEFAEKENLFFLETSALQATNVENAFQTVLSEIFKIHSKKNMAADP 170
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLST 234
P LAG K+ V+ G EI + K S+
Sbjct: 171 KANGAAPSLAGKKV-VVPGPAQEIPKSKCCSS 201
>gi|432958664|ref|XP_004086096.1| PREDICTED: ras-related protein Rab-11A-like isoform 1 [Oryzias
latipes]
Length = 215
Score = 236 bits (602), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 111/176 (63%), Positives = 144/176 (81%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK +KAQIW
Sbjct: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTVKAQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI K ++++V RW++ELR HADS+I I+L+GNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNK 125
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL 198
SDL +RAV ++A FAE GL F E SAL+ NV+TAF +L EIY VS+K++
Sbjct: 126 SDLRHLRAVPTDEARAFAEKNGLSFLETSALDSTNVETAFQTILTEIYRIVSQKQM 181
>gi|348542088|ref|XP_003458518.1| PREDICTED: ras-related protein Rab-11A-like [Oreochromis niloticus]
gi|410912336|ref|XP_003969646.1| PREDICTED: ras-related protein Rab-11A-like [Takifugu rubripes]
Length = 215
Score = 236 bits (602), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 111/176 (63%), Positives = 144/176 (81%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK +KAQIW
Sbjct: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTVKAQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI K ++++V RW++ELR HADS+I I+L+GNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNK 125
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL 198
SDL +RAV ++A FAE GL F E SAL+ NV+TAF +L EIY VS+K++
Sbjct: 126 SDLRHLRAVPTDEARAFAEKNGLSFLETSALDSTNVETAFQTILTEIYRIVSQKQM 181
>gi|226500010|ref|NP_001149955.1| LOC100283582 [Zea mays]
gi|195635711|gb|ACG37324.1| ras-related protein RIC2 [Zea mays]
Length = 217
Score = 236 bits (602), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 115/214 (53%), Positives = 156/214 (72%), Gaps = 6/214 (2%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK++KAQIW
Sbjct: 9 DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKVVKAQIW 68
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYD+T+ +F++V RW++ELR H D +I ++L+GNK
Sbjct: 69 DTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLKELRDHTDPNIVVMLVGNK 128
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
SDL + AV ++ FAE + L+F E SAL NV+ AF +L +IY VSK+ +E G
Sbjct: 129 SDLRHLVAVQTDEGKAFAERESLYFMETSALESTNVENAFAEVLAQIYRIVSKRAVEAGE 188
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
GP G KI++ ++S +KK CS
Sbjct: 189 DAASGPGR--GEKINIKD----DVSAVKKGGCCS 216
>gi|212723196|ref|NP_001131362.1| uncharacterized protein LOC100192685 [Zea mays]
gi|194691316|gb|ACF79742.1| unknown [Zea mays]
gi|195612658|gb|ACG28159.1| ras-related protein RGP2 [Zea mays]
gi|413948932|gb|AFW81581.1| Ras protein RGP2 [Zea mays]
Length = 217
Score = 236 bits (602), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 110/170 (64%), Positives = 140/170 (82%)
Query: 27 YVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTAG 86
Y+FK+V+IGDS VGKS ILSRFT+N F DSKSTIGVEF T+++ I+GK IKAQIWDTAG
Sbjct: 11 YLFKMVLIGDSGVGKSNILSRFTRNHFSLDSKSTIGVEFATKSLQIDGKTIKAQIWDTAG 70
Query: 87 QERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDLV 146
QERYRA+TSAYYRGA+ A++VYDITKRQSFD+V RW+ ELR HADSSI I+++GNKSDL+
Sbjct: 71 QERYRAITSAYYRGAVAALLVYDITKRQSFDNVHRWLRELRDHADSSIVIMMVGNKSDLI 130
Query: 147 DMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKK 196
+RA+S ++ AE +GLFF E SA+ NV+ AF ++ E+YG V++K
Sbjct: 131 HLRAISEDEGKALAEKEGLFFLETSAMEAINVEEAFQTIITEVYGIVNRK 180
>gi|1370160|emb|CAA98186.1| RAB11J [Lotus japonicus]
Length = 223
Score = 236 bits (601), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 116/211 (54%), Positives = 150/211 (71%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
DY+FK+V+IGDSAVGKS +L+RF ++EF+ +SKSTIGVEFQT+ + INGK IKAQIWDTA
Sbjct: 12 DYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKIDINGKEIKAQIWDTA 71
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQER+RAVTSAYYRGA+GA+VVYDI++RQ+FD + RW+ EL H+D ++ IL+GNKSDL
Sbjct: 72 GQERFRAVTSAYYRGAVGALVVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNGKV 205
D R V+ + AE QGLFF E SAL+ NV AF +++EIY +S+K +
Sbjct: 132 KDAREVTTAEGKALAEAQGLFFMETSALDSSNVAAAFQTVVKEIYNILSRKVMMSQELTK 191
Query: 206 DGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
P + K VI G +LE K CS
Sbjct: 192 HEVPRIENGKSVVIQGENLEADGQSKKGCCS 222
>gi|452846261|gb|EME48194.1| hypothetical protein DOTSEDRAFT_69969 [Dothistroma septosporum
NZE10]
Length = 212
Score = 236 bits (601), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 118/201 (58%), Positives = 152/201 (75%), Gaps = 3/201 (1%)
Query: 20 MIPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKA 79
M D+ D++FKVV+IGDS VGKS +LSRFT+NEF DSKSTIGVEF TR++ ++ K IKA
Sbjct: 1 MANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDNKTIKA 60
Query: 80 QIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILI 139
QIWDTAGQERYRA+TSAYYRGA+GA++VYDI+K ++++V RW++ELR HAD++I I+L+
Sbjct: 61 QIWDTAGQERYRAITSAYYRGAVGALLVYDISKHNTYENVTRWLKELRDHADTNIVIMLV 120
Query: 140 GNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELE 199
GNKSDL +RAV E+A +FA + GL F E SAL+ NV+ AF L EIY VS K L+
Sbjct: 121 GNKSDLRHLRAVPTEEAKQFASENGLSFIETSALDASNVELAFQNELTEIYRIVSSKALD 180
Query: 200 CGNGKVDGPPMLAGSKIDVIS 220
G + GP GS I + S
Sbjct: 181 QGE-QTAGPSQ--GSAIPLSS 198
>gi|353239723|emb|CCA71622.1| probable GTP-binding protein Rab11 [Piriformospora indica DSM
11827]
Length = 268
Score = 236 bits (601), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 111/176 (63%), Positives = 140/176 (79%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
DY+FKVV+IGDS VGKS +LSRFT+NEF DSKSTIGVEF TR++ ++GK +KAQIWDTA
Sbjct: 8 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSINVDGKTVKAQIWDTA 67
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQERYRA+TSAYYRGA+GA++VYDI K ++ +V RW++ELR HADS+I I+L+GNKSDL
Sbjct: 68 GQERYRAITSAYYRGAVGALLVYDIAKHSTYTNVTRWLKELRDHADSNIVIMLVGNKSDL 127
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECG 201
+RAV ++A F+ D GL F E SAL+G NV+ AF +L +IY VS K LE
Sbjct: 128 KHLRAVPTDEAKAFSADNGLSFIETSALDGGNVEAAFQNILTDIYRIVSNKALEAA 183
>gi|194387154|dbj|BAG59943.1| unnamed protein product [Homo sapiens]
Length = 261
Score = 236 bits (601), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 111/176 (63%), Positives = 143/176 (81%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIW
Sbjct: 51 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIW 110
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI K ++++V RW++ELR HADS+I I+L+GNK
Sbjct: 111 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNK 170
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL 198
SDL +RAV ++A FAE GL F E SAL+ NV+ AF +L EIY VS+K++
Sbjct: 171 SDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQM 226
>gi|218228|dbj|BAA02904.1| ras-related GTP binding protein [Oryza sativa]
Length = 217
Score = 236 bits (601), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 115/214 (53%), Positives = 157/214 (73%), Gaps = 6/214 (2%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK++KAQIW
Sbjct: 9 DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKVVKAQIW 68
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYD+T+ +F++V RW++ELR H D +I ++L+GNK
Sbjct: 69 DTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLKELRDHTDPNIVVMLVGNK 128
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
SDL + AV ++ FAE + L+F E SAL NV+ AF +L +IY VSK+ +E G+
Sbjct: 129 SDLRHLVAVQTDEGKAFAERESLYFMETSALESTNVENAFAEVLTQIYRIVSKRSVEAGD 188
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
GP G KI++ ++S +KK CS
Sbjct: 189 DAGSGPG--KGEKINIKD----DVSAVKKGGCCS 216
>gi|198434696|ref|XP_002131435.1| PREDICTED: similar to Ras-related protein Rab-11B (ORA3) [Ciona
intestinalis]
Length = 217
Score = 236 bits (601), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 114/191 (59%), Positives = 148/191 (77%), Gaps = 3/191 (1%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ +NGK IKAQIW
Sbjct: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVNGKTIKAQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI K ++++V RW++ELR HAD++I I+L+GNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNK 125
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
SDL +RAV ++A F+E GL F E SAL+ NV+ AF +L EIY VS+K++ N
Sbjct: 126 SDLRHLRAVPTDEAKAFSEKNGLSFIETSALDSTNVEVAFQNILTEIYLIVSQKQINDSN 185
Query: 203 GK---VDGPPM 210
DG P+
Sbjct: 186 NDEEVKDGQPV 196
>gi|55925277|ref|NP_001007360.1| ras-related protein Rab-11A [Danio rerio]
gi|55250361|gb|AAH85585.1| RAB11a, member RAS oncogene family [Danio rerio]
gi|126541086|emb|CAM46852.1| novel protein similar to vertebrate Ras family [Danio rerio]
gi|182891330|gb|AAI64310.1| Rab11a protein [Danio rerio]
Length = 215
Score = 236 bits (601), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 111/176 (63%), Positives = 144/176 (81%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK +KAQIW
Sbjct: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTVKAQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI K ++++V RW++ELR HADS+I I+L+GNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNK 125
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL 198
SDL +RAV ++A FAE GL F E SAL+ NV+TAF +L EIY VS+K++
Sbjct: 126 SDLRHLRAVPTDEARAFAEKNGLSFLETSALDSTNVETAFQTILTEIYRIVSQKQM 181
>gi|115468476|ref|NP_001057837.1| Os06g0551400 [Oryza sativa Japonica Group]
gi|109940140|sp|P40393.2|RIC2_ORYSJ RecName: Full=Ras-related protein RIC2
gi|13195452|gb|AAK15703.1| GTP-binding protein [Oryza sativa]
gi|53792703|dbj|BAD53715.1| GTP-binding protein [Oryza sativa Japonica Group]
gi|113595877|dbj|BAF19751.1| Os06g0551400 [Oryza sativa Japonica Group]
gi|125555691|gb|EAZ01297.1| hypothetical protein OsI_23327 [Oryza sativa Indica Group]
gi|215694833|dbj|BAG90024.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222635728|gb|EEE65860.1| hypothetical protein OsJ_21648 [Oryza sativa Japonica Group]
Length = 217
Score = 236 bits (601), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 115/214 (53%), Positives = 157/214 (73%), Gaps = 6/214 (2%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK++KAQIW
Sbjct: 9 DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKVVKAQIW 68
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYD+T+ +F++V RW++ELR H D +I ++L+GNK
Sbjct: 69 DTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLKELRDHTDPNIVVMLVGNK 128
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
SDL + AV ++ FAE + L+F E SAL NV+ AF +L +IY VSK+ +E G+
Sbjct: 129 SDLRHLVAVQTDEGKAFAERESLYFMETSALESTNVENAFAEVLTQIYRIVSKRSVEAGD 188
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
GP G KI++ ++S +KK CS
Sbjct: 189 DAGSGPG--KGEKINIKD----DVSAVKKGGCCS 216
>gi|417409144|gb|JAA51094.1| Putative rab subfamily protein of small gtpase, partial [Desmodus
rotundus]
Length = 261
Score = 236 bits (601), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 111/176 (63%), Positives = 143/176 (81%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIW
Sbjct: 51 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIW 110
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI K ++++V RW++ELR HADS+I I+L+GNK
Sbjct: 111 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNK 170
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL 198
SDL +RAV ++A FAE GL F E SAL+ NV+ AF +L EIY VS+K++
Sbjct: 171 SDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQM 226
>gi|126138088|ref|XP_001385567.1| hypothetical protein PICST_68134 [Scheffersomyces stipitis CBS
6054]
gi|126092845|gb|ABN67538.1| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 220
Score = 236 bits (601), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 107/183 (58%), Positives = 148/183 (80%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
+Y++K+V+IGDS VGKS +LSRFT++EF +S+STIGVEF TRT+ I+GK +KAQIWDTA
Sbjct: 13 EYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRVKAQIWDTA 72
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQERYRA+TSAYYRGA+GA++VYDI K ++++ V+RW++EL+ HAD++I I L+GNKSDL
Sbjct: 73 GQERYRAITSAYYRGAVGALIVYDIAKTETYESVSRWLKELKEHADANIVIELVGNKSDL 132
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNGKV 205
+RAV E+A FA + L F+EASAL+ DNVD +F +LL+ IY +SK +L+ +G
Sbjct: 133 DHLRAVPTEEARNFANENNLLFTEASALSSDNVDLSFHQLLKNIYEMISKHQLDTNDGGS 192
Query: 206 DGP 208
+ P
Sbjct: 193 NKP 195
>gi|375332073|gb|AFA52576.1| Rab11 family GTPase [Vaucheria litorea]
Length = 272
Score = 235 bits (600), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 118/213 (55%), Positives = 156/213 (73%), Gaps = 2/213 (0%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
++ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF T+++ KIIKAQIW
Sbjct: 60 EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNMESKSTIGVEFATKSIQTENKIIKAQIW 119
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDITK +F++ RW++ELR HA+S+I ++L+GNK
Sbjct: 120 DTAGQERYRAITSAYYRGAVGALLVYDITKHSTFENAERWLKELRDHAESNIVVMLVGNK 179
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
DL +R VS E+A EFAE L F E SAL+ VDTAF ++L EIY ++KK++ GN
Sbjct: 180 CDLRHLRTVSVEEAKEFAEKNSLAFIETSALDSSGVDTAFQQILTEIYKLMNKKQM-SGN 238
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLSTC 235
G + + G +I + SG D + S C
Sbjct: 239 GN-NSLNIGQGERIALNSGGDKASGDGSACSGC 270
>gi|313231377|emb|CBY08492.1| unnamed protein product [Oikopleura dioica]
Length = 217
Score = 235 bits (600), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 112/176 (63%), Positives = 143/176 (81%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ + GK IKAQIW
Sbjct: 5 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVEGKTIKAQIW 64
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+T+AYYRGA+GA++VYDI K ++++V RW++ELR HAD++I I+L+GNK
Sbjct: 65 DTAGQERYRAITAAYYRGAVGALLVYDIAKHTTYENVERWLKELRDHADNNIVIMLVGNK 124
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL 198
SDL +RAV EDA +AE Q L F E SAL+ NV+TAF +L EIY VS+K+L
Sbjct: 125 SDLRHLRAVPTEDARNYAERQSLSFIETSALDSTNVETAFQNILTEIYKIVSQKQL 180
>gi|303746|dbj|BAA02114.1| GTP-binding protein [Pisum sativum]
gi|738938|prf||2001457F GTP-binding protein
Length = 218
Score = 235 bits (600), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 118/215 (54%), Positives = 156/215 (72%), Gaps = 6/215 (2%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FK+V+IGDS VGKS +LSRFT+NEF +SKSTIGVEF T+++ I+ K+IKAQIW
Sbjct: 8 DEYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLNIDSKVIKAQIW 67
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYD+T+R +F++ ARW++ELR H D +I ++LIGNK
Sbjct: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNIVVMLIGNK 127
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECG- 201
SDL + AV ED FAE + L+F E SAL NV+ AF +L +IY VSKK +E G
Sbjct: 128 SDLRHLVAVPTEDGKSFAERESLYFMETSALEATNVENAFSEVLSQIYHIVSKKAVEAGE 187
Query: 202 NGKVDGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
+G P + G I+V + S K+ CS
Sbjct: 188 SGSSSAVPSI-GQTINVKEDS----SVFKRFGCCS 217
>gi|156360921|ref|XP_001625271.1| predicted protein [Nematostella vectensis]
gi|156212096|gb|EDO33171.1| predicted protein [Nematostella vectensis]
Length = 218
Score = 235 bits (600), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 111/177 (62%), Positives = 143/177 (80%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIW
Sbjct: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI K ++++V RW++ELR HADS+I I+L+GNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNK 125
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELE 199
SDL +RAV ++A FAE GL F E SAL+ NV+ AF +L EIY VS+K++
Sbjct: 126 SDLRHLRAVPTDEAKAFAEKNGLSFIETSALDSTNVEVAFHNILTEIYHIVSQKQIH 182
>gi|389640453|ref|XP_003717859.1| Ras-like protein Rab-11A [Magnaporthe oryzae 70-15]
gi|351640412|gb|EHA48275.1| Ras-like protein Rab-11A [Magnaporthe oryzae 70-15]
gi|440469695|gb|ELQ38797.1| GTP-binding protein ypt3 [Magnaporthe oryzae Y34]
gi|440479119|gb|ELQ59905.1| GTP-binding protein ypt3 [Magnaporthe oryzae P131]
Length = 211
Score = 235 bits (600), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 114/191 (59%), Positives = 146/191 (76%), Gaps = 4/191 (2%)
Query: 20 MIPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKA 79
M D+ D++FKVV+IGDS VGKS +LSRFT+NEF DSKSTIGVEF TR++ ++ K IKA
Sbjct: 1 MANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKA 60
Query: 80 QIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILI 139
QIWDTAGQERYRA+TSAYYRGA+GA++VYDI+K Q++++V RW++ELR HAD++I I+L+
Sbjct: 61 QIWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLV 120
Query: 140 GNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELE 199
GNKSDL +RAV E+A FA + L F E SA + NV+ AF +L EIY VS K L+
Sbjct: 121 GNKSDLRHLRAVPTEEAKAFASENHLSFIETSAFDASNVELAFQNILTEIYRIVSSKALD 180
Query: 200 CGNGKVDGPPM 210
G D P M
Sbjct: 181 SG----DTPSM 187
>gi|448122797|ref|XP_004204534.1| Piso0_000385 [Millerozyma farinosa CBS 7064]
gi|448125077|ref|XP_004205092.1| Piso0_000385 [Millerozyma farinosa CBS 7064]
gi|358249725|emb|CCE72791.1| Piso0_000385 [Millerozyma farinosa CBS 7064]
gi|358350073|emb|CCE73352.1| Piso0_000385 [Millerozyma farinosa CBS 7064]
Length = 220
Score = 235 bits (600), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 113/212 (53%), Positives = 157/212 (74%), Gaps = 5/212 (2%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
+Y++K+V+IGDS VGKS +LSRFT++EF +S+STIGVEF TRT+ I+GK +KAQIWDTA
Sbjct: 13 EYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRVKAQIWDTA 72
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQERYRA+TSAYYRGA+GA++VYDI+K +S++ V+RW++EL+ HAD++I I L+GNKSDL
Sbjct: 73 GQERYRAITSAYYRGAVGALIVYDISKTESYESVSRWLKELKEHADANIVIELVGNKSDL 132
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNGKV 205
+RAV ++A FA + L F+EASAL+ DNVD +F +LL+ IY +SK +L+ +G
Sbjct: 133 DHLRAVPTDEAKNFANENNLLFTEASALSSDNVDLSFHQLLKNIYEMISKHQLDTSDGAN 192
Query: 206 DGPPMLAGSKIDVISGADLEISEMKKLSTCSC 237
P G I + E K S+ +C
Sbjct: 193 ANKPS-GGPTISLTPAP----QEKKSKSSSNC 219
>gi|50285709|ref|XP_445283.1| hypothetical protein [Candida glabrata CBS 138]
gi|49524587|emb|CAG58189.1| unnamed protein product [Candida glabrata]
Length = 218
Score = 235 bits (600), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 119/212 (56%), Positives = 151/212 (71%), Gaps = 5/212 (2%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
DY+FK+V+IGDS VGKS +LSRFT NEF DSKSTIGVEF TRT+ ++GK IKAQIWDTA
Sbjct: 11 DYLFKIVLIGDSGVGKSNLLSRFTTNEFNIDSKSTIGVEFATRTIDVDGKKIKAQIWDTA 70
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQERYRA+TSAYYRGA+GA++VYDI+K S+++ W+ ELR +AD ++ + LIGNKSDL
Sbjct: 71 GQERYRAITSAYYRGAVGALIVYDISKSSSYENCHHWLSELRENADDNVAVGLIGNKSDL 130
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNGKV 205
+RAV E+A +FA + L F+E SALN DNVD AF L+ I+ VSK ++E N
Sbjct: 131 AHLRAVPTEEAKQFASENQLLFTETSALNSDNVDLAFKELITAIHQKVSKHQVELSNANK 190
Query: 206 DGPPMLAGSKIDVISGADLEISEMKKLSTCSC 237
G AG IS +E KK S+ +C
Sbjct: 191 PG----AGPNGPTISLTPAP-NEKKKSSSNNC 217
>gi|297796867|ref|XP_002866318.1| hypothetical protein ARALYDRAFT_919138 [Arabidopsis lyrata subsp.
lyrata]
gi|297312153|gb|EFH42577.1| hypothetical protein ARALYDRAFT_919138 [Arabidopsis lyrata subsp.
lyrata]
Length = 217
Score = 235 bits (600), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 112/171 (65%), Positives = 138/171 (80%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
DY+FK+V+IGDS VGKS ILSRFT+NEF +SKSTIGVEF TRT+ + GK +KAQIWDTA
Sbjct: 10 DYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTA 69
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQERYRA+TSAYYRGA+GA++VYDITKRQ+FD+V RW+ ELR HADS+I I++ GNK+DL
Sbjct: 70 GQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNKADL 129
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKK 196
+R+V+ ED AE +GL F E SAL NV+ AF +L EIY +SKK
Sbjct: 130 NHLRSVAEEDGQTLAETEGLSFLETSALEATNVEKAFQTVLAEIYHIISKK 180
>gi|226287961|gb|EEH43474.1| GTP-binding protein ypt3 [Paracoccidioides brasiliensis Pb18]
Length = 210
Score = 235 bits (600), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 116/191 (60%), Positives = 144/191 (75%), Gaps = 2/191 (1%)
Query: 20 MIPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKA 79
M D+ D++FKVV+IGDS VGKS +LSRFT+NEF DSKSTIGVEF TR++ ++GK IKA
Sbjct: 1 MANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDGKTIKA 60
Query: 80 QIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILI 139
QIWDTAGQERYRA+TSAYYRGA+GA++VYD TK+Q+F + RW++ELR HAD +I I+L+
Sbjct: 61 QIWDTAGQERYRAITSAYYRGAVGALLVYDTTKKQTFANCERWLKELREHADKNIVIMLV 120
Query: 140 GNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELE 199
GNK D MR V DAVEFA++ L F E SAL+ NV+ AF +L EIY VS K LE
Sbjct: 121 GNKIDEKHMRDVKTSDAVEFADEMKLSFIETSALDATNVELAFQNILTEIYRIVSSKALE 180
Query: 200 CGNGKVDGPPM 210
NG P+
Sbjct: 181 --NGSSSQNPL 189
>gi|403163937|ref|XP_003324018.2| GTP-binding protein ypt3 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375164677|gb|EFP79599.2| GTP-binding protein ypt3 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 214
Score = 235 bits (599), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 118/198 (59%), Positives = 151/198 (76%), Gaps = 3/198 (1%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
D++FKVV+IGDS VGKS +LSRFT+NEF DSKSTIGVEF TR+++++GK IKAQIWDTA
Sbjct: 8 DFLFKVVLIGDSGVGKSNLLSRFTRNEFNMDSKSTIGVEFATRSISVDGKTIKAQIWDTA 67
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQERYRA+TSAYYRGA+GA++VYDI+K ++ +V RW++ELR HADS+I I+L+GNKSDL
Sbjct: 68 GQERYRAITSAYYRGAVGALLVYDISKHPTYVNVQRWLKELRDHADSNIVIMLVGNKSDL 127
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNGKV 205
+RAV E+A FA + L F E SA++ NV+TAF +L +IY VS K LE V
Sbjct: 128 RHLRAVPTEEAQAFATENNLSFIETSAMDASNVETAFQNILTDIYRIVSSKALESSADAV 187
Query: 206 DGPPMLAGSKIDVISGAD 223
GP +GS I V +D
Sbjct: 188 -GPT--SGSTITVTPTSD 202
>gi|452824501|gb|EME31503.1| Rab family, other [Galdieria sulphuraria]
Length = 215
Score = 235 bits (599), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 114/176 (64%), Positives = 141/176 (80%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FK+V+IGDS VGKS +LSRFT+NEF +SKSTIGVEF T++V GK IKAQIW
Sbjct: 6 DEYDYLFKIVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSVQTEGKTIKAQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI+K++SF V +W++ELR HADS+I I+L+GNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGALLVYDISKKESFIGVEKWLKELRDHADSNIVIMLVGNK 125
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL 198
SDL +RAVS E+ EFAE L F E SAL+ NV+ AF +LL EIY V KK L
Sbjct: 126 SDLKHLRAVSTEEGKEFAEKHSLSFIETSALDATNVEQAFTQLLTEIYRIVHKKAL 181
>gi|443733114|gb|ELU17603.1| hypothetical protein CAPTEDRAFT_226009 [Capitella teleta]
Length = 214
Score = 235 bits (599), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 117/213 (54%), Positives = 155/213 (72%), Gaps = 4/213 (1%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIW
Sbjct: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI K ++++V RW++ELR HAD++I I+L+GNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNK 125
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
SDL +RAV ++A FAE L F E SAL+ NV+TAF +L EIY VS+K++
Sbjct: 126 SDLRHLRAVPTDEAKAFAEKNNLSFIETSALDSTNVETAFQNILTEIYKIVSQKQIRDSP 185
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLSTC 235
+ P + + I+ A + S KK C
Sbjct: 186 DDENSP----SNNVQTITVAPTDNSADKKQKCC 214
>gi|70990240|ref|XP_749969.1| Ras GTPase Rab11 [Aspergillus fumigatus Af293]
gi|66847601|gb|EAL87931.1| Ras GTPase Rab11, putative [Aspergillus fumigatus Af293]
gi|159130449|gb|EDP55562.1| Ras GTPase Rab11, putative [Aspergillus fumigatus A1163]
Length = 204
Score = 235 bits (599), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 116/198 (58%), Positives = 148/198 (74%), Gaps = 2/198 (1%)
Query: 28 VFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTAGQ 87
V VV+IGDS VGKS +LSRFT+NEF DSKSTIGVEF TR++ ++ K IKAQIWDTAGQ
Sbjct: 3 VLTVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDTAGQ 62
Query: 88 ERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDLVD 147
ERYRA+TSAYYRGA+GA++VYDI+K Q++D+V RW++ELR HADS+I I+L+GNKSDL
Sbjct: 63 ERYRAITSAYYRGAVGALLVYDISKHQTYDNVNRWLKELRDHADSNIVIMLVGNKSDLRH 122
Query: 148 MRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNGKVDG 207
+RAV ++A +FA + L F E SAL+ NV+ AF +L EIY VS K L+ NG
Sbjct: 123 LRAVPTDEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALD--NGDSGQ 180
Query: 208 PPMLAGSKIDVISGADLE 225
P+ +G I+V D E
Sbjct: 181 APLSSGRTIEVSKAPDTE 198
>gi|219130377|ref|XP_002185343.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217403258|gb|EEC43212.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 214
Score = 235 bits (599), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 114/216 (52%), Positives = 156/216 (72%), Gaps = 8/216 (3%)
Query: 21 IPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQ 80
+ ++ DY+FK+V+IGDS VGKS +LSRFT+NEF +SKSTIGVEF T+++ GK IKAQ
Sbjct: 5 VDEEYDYLFKIVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIQAEGKTIKAQ 64
Query: 81 IWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIG 140
IWDTAGQERYRA+TSAYYRGA+GA++VYDI+K +F++V RW++ELR HA+++I ++L+G
Sbjct: 65 IWDTAGQERYRAITSAYYRGAVGALLVYDISKHGTFENVERWLKELRDHAEANIVVMLVG 124
Query: 141 NKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELEC 200
NKSDL +RAV ++A+ F+E L F E SAL+ VDTAF R+L EIY +S++ ++
Sbjct: 125 NKSDLRHLRAVETDEAMAFSEQHNLAFIETSALDASGVDTAFQRILTEIYRLMSRRNMQA 184
Query: 201 GNGKVDGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
PM AG KI + D KK C+
Sbjct: 185 EENA--NAPMSAGHKISLSQSGD------KKKGCCA 212
>gi|401839461|gb|EJT42683.1| YPT31-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 223
Score = 235 bits (599), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 114/197 (57%), Positives = 146/197 (74%), Gaps = 4/197 (2%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
D +FK+V+IGDS VGKS +LSRFTKNEF DSKSTIGVEF TRT+ I+GK IKAQIWDTA
Sbjct: 11 DLLFKIVLIGDSGVGKSNLLSRFTKNEFNMDSKSTIGVEFATRTLEIDGKRIKAQIWDTA 70
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQERYRA+TSAYYRGA+GA++VYDI+K S+++ W+ ELR +AD ++ + LIGNKSDL
Sbjct: 71 GQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLSELRENADDNVAVGLIGNKSDL 130
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECG---- 201
+RAV E++ FA++ L F+E SALN +NVD AF L+ IY VSK +++ G
Sbjct: 131 AHLRAVPTEESKTFAQENQLLFTETSALNSENVDEAFEELINTIYQKVSKHQMDLGDSST 190
Query: 202 NGKVDGPPMLAGSKIDV 218
NG V+G G I +
Sbjct: 191 NGNVNGASAPNGPTISL 207
>gi|387914788|gb|AFK11003.1| ras-related protein Rab-11A isoform 1 [Callorhinchus milii]
Length = 216
Score = 235 bits (599), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 111/176 (63%), Positives = 143/176 (81%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK KAQIW
Sbjct: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTTKAQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI K ++++V RW++ELR HADS+I I+L+GNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNK 125
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL 198
SDL +RAV ++A FAE GL F E SAL+ NV+TAF +L EIY VS+K++
Sbjct: 126 SDLRHLRAVPTDEAKAFAEKNGLSFIETSALDSTNVETAFQTILTEIYRIVSQKQM 181
>gi|326435207|gb|EGD80777.1| tubulovesicle-associated protein [Salpingoeca sp. ATCC 50818]
Length = 214
Score = 235 bits (599), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 116/215 (53%), Positives = 155/215 (72%), Gaps = 6/215 (2%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
++ D++FK+V+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIW
Sbjct: 5 EEYDFLFKIVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIW 64
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI K S+++V+RW++ELR HADS+I I+L+GNK
Sbjct: 65 DTAGQERYRAITSAYYRGAVGALLVYDIAKHASYENVSRWLKELRDHADSNIVIMLVGNK 124
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
SDL +RAV E+A +FAE+ L F E SAL+ NV+ AF +L IY VS++ ++ G
Sbjct: 125 SDLKHLRAVPKEEATKFAEENSLSFIETSALDSTNVEEAFKNILTSIYRLVSQRSIKAGE 184
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLSTCSC 237
P S V+ D +E K C C
Sbjct: 185 SDKTTP-----SDTIVVGPTDSSTTETSK-GGCGC 213
>gi|224061286|ref|XP_002300408.1| predicted protein [Populus trichocarpa]
gi|118482455|gb|ABK93150.1| unknown [Populus trichocarpa]
gi|222847666|gb|EEE85213.1| predicted protein [Populus trichocarpa]
Length = 215
Score = 235 bits (599), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 115/211 (54%), Positives = 157/211 (74%), Gaps = 7/211 (3%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
DY+FK+V+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++ KI+KAQIWDTA
Sbjct: 11 DYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIRVDDKIVKAQIWDTA 70
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQERYRA+TSAYYRGA+GA++VYD+T+ +F++V RW++ELR H D++I I+ +GNK+DL
Sbjct: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMFVGNKADL 130
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNGKV 205
+RAVS EDA FAE + +F E SAL NV+ AF +L +IY VS+K L+ G+
Sbjct: 131 RHLRAVSTEDAKAFAERENTYFMETSALESLNVENAFTEVLTQIYHVVSRKALDIGD--- 187
Query: 206 DGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
D + G I+V ++S +KK+ CS
Sbjct: 188 DPAALPKGETINVKD----DVSAVKKVGCCS 214
>gi|49456343|emb|CAG46492.1| RAB11B [Homo sapiens]
Length = 218
Score = 234 bits (598), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 119/203 (58%), Positives = 152/203 (74%), Gaps = 10/203 (4%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIW
Sbjct: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI K ++++V RW++ELR HADS+I I+L+GNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNK 125
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL-EC- 200
SDL +RAV ++A FAE L F E SAL+ NV+ AF +L EIY VS+K++ +C
Sbjct: 126 SDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADCA 185
Query: 201 ------GNGKVD--GPPMLAGSK 215
GN VD PP G K
Sbjct: 186 AHDESPGNNVVDISVPPTTDGQK 208
>gi|392596215|gb|EIW85538.1| GTPase [Coniophora puteana RWD-64-598 SS2]
Length = 211
Score = 234 bits (598), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 111/183 (60%), Positives = 142/183 (77%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
DY+FKVV+IGDS VGKS +LSRFT+NEF DSKSTIGVEF TRT+ ++GK +KAQIWDTA
Sbjct: 8 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRTINVDGKTVKAQIWDTA 67
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQERYRA+TSAYYRGA+GA++VYDI K ++ +V RW++ELR HAD++I I+L+GNKSDL
Sbjct: 68 GQERYRAITSAYYRGAVGALLVYDIAKHATYANVTRWLKELRDHADANIVIMLVGNKSDL 127
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNGKV 205
+RAV E+A FA + L F E SAL+ NV++AF +L +IY VS K LE + +
Sbjct: 128 KHLRAVPTEEAKTFATENELSFIETSALDASNVESAFQTILTDIYRIVSSKTLEQSSDPI 187
Query: 206 DGP 208
P
Sbjct: 188 KAP 190
>gi|170094506|ref|XP_001878474.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164646928|gb|EDR11173.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 211
Score = 234 bits (598), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 109/183 (59%), Positives = 144/183 (78%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK +KAQIWDTA
Sbjct: 8 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTVKAQIWDTA 67
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQERYRA+TSAYYRGA+GA++VYDI K ++ +V RW++ELR HADS+I I+L+GNKSDL
Sbjct: 68 GQERYRAITSAYYRGAVGALLVYDIAKHATYVNVTRWLKELRDHADSNIVIMLVGNKSDL 127
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNGKV 205
+RAV+ ++A F+ + GL F E SAL+ NV++AF +L +IY VS K LE +
Sbjct: 128 KHLRAVTTDEAKAFSTENGLSFIETSALDASNVESAFQTILTDIYRIVSSKSLESSTNNI 187
Query: 206 DGP 208
+ P
Sbjct: 188 EPP 190
>gi|60833728|gb|AAX37062.1| RAB11B member RAS oncogene family [synthetic construct]
Length = 219
Score = 234 bits (598), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 119/203 (58%), Positives = 152/203 (74%), Gaps = 10/203 (4%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIW
Sbjct: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI K ++++V RW++ELR HADS+I I+L+GNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNK 125
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL-EC- 200
SDL +RAV ++A FAE L F E SAL+ NV+ AF +L EIY VS+K++ +C
Sbjct: 126 SDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADCA 185
Query: 201 ------GNGKVD--GPPMLAGSK 215
GN VD PP G K
Sbjct: 186 AHDESPGNNVVDISVPPTTDGQK 208
>gi|15237828|ref|NP_200723.1| RAB GTPase homolog A2D [Arabidopsis thaliana]
gi|75170819|sp|Q9FIF9.1|RAA2D_ARATH RecName: Full=Ras-related protein RABA2d; Short=AtRABA2d
gi|13877729|gb|AAK43942.1|AF370127_1 putative GTP-binding protein rab11 [Arabidopsis thaliana]
gi|9759237|dbj|BAB09761.1| GTP-binding protein rab11 [Arabidopsis thaliana]
gi|14532854|gb|AAK64109.1| putative GTP-binding protein rab11 [Arabidopsis thaliana]
gi|332009766|gb|AED97149.1| RAB GTPase homolog A2D [Arabidopsis thaliana]
Length = 217
Score = 234 bits (598), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 111/171 (64%), Positives = 138/171 (80%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
DY+FK+V+IGDS VGK+ ILSRFT+NEF +SKSTIGVEF TRT+ + GK +KAQIWDTA
Sbjct: 10 DYLFKIVLIGDSGVGKTNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTA 69
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQERYRA+TSAYYRGA+GA++VYDITKRQ+FD+V RW+ ELR HADS+I I++ GNK+DL
Sbjct: 70 GQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNKADL 129
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKK 196
+R+V+ ED AE +GL F E SAL NV+ AF +L EIY +SKK
Sbjct: 130 NHLRSVAEEDGQTLAETEGLSFLETSALEATNVEKAFQTVLAEIYHIISKK 180
>gi|367035076|ref|XP_003666820.1| hypothetical protein MYCTH_2140896 [Myceliophthora thermophila ATCC
42464]
gi|347014093|gb|AEO61575.1| hypothetical protein MYCTH_2140896 [Myceliophthora thermophila ATCC
42464]
Length = 213
Score = 234 bits (598), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 120/209 (57%), Positives = 149/209 (71%), Gaps = 7/209 (3%)
Query: 20 MIPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKA 79
M D+ D++FKVV+IGDS VGKS +LSRFT+NEF DSKSTIGVEF TR++ I+GK IKA
Sbjct: 1 MANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQIDGKTIKA 60
Query: 80 QIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILI 139
QIWDTAGQERYRA+TSAYYRGA+GA++VYDI+K SF++V RW++ELR HADS+I I+L+
Sbjct: 61 QIWDTAGQERYRAITSAYYRGAVGALLVYDISKSLSFENVTRWLKELRDHADSNIVIMLV 120
Query: 140 GNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELE 199
GNK+D +RAV ED FA + GL F E SAL NVD AF +L IY VS K L
Sbjct: 121 GNKTDQRHLRAVPTEDGKNFASENGLSFIETSALEATNVDLAFQNILTSIYQIVSSKSLA 180
Query: 200 CGNGKVDGPPMLAGSKIDVISGADLEISE 228
V G K D G ++ +S+
Sbjct: 181 EEGADV-------GKKFDPREGNNISLSQ 202
>gi|365761030|gb|EHN02706.1| Ypt31p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 223
Score = 234 bits (598), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 114/197 (57%), Positives = 146/197 (74%), Gaps = 4/197 (2%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
D +FK+V+IGDS VGKS +LSRFTKNEF DSKSTIGVEF TRT+ I+GK IKAQIWDTA
Sbjct: 11 DLLFKIVLIGDSGVGKSNLLSRFTKNEFNMDSKSTIGVEFATRTLEIDGKRIKAQIWDTA 70
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQERYRA+TSAYYRGA+GA++VYDI+K S+++ W+ ELR +AD ++ + LIGNKSDL
Sbjct: 71 GQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLSELRENADDNVAVGLIGNKSDL 130
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECG---- 201
+RAV E++ FA++ L F+E SALN +NVD AF L+ IY VSK +++ G
Sbjct: 131 AHLRAVPTEESKTFAQENQLLFTETSALNSENVDKAFEELINTIYQKVSKHQMDLGDSST 190
Query: 202 NGKVDGPPMLAGSKIDV 218
NG V+G G I +
Sbjct: 191 NGNVNGASAPNGPTISL 207
>gi|355703084|gb|EHH29575.1| GTP-binding protein YPT3 [Macaca mulatta]
Length = 218
Score = 234 bits (598), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 118/203 (58%), Positives = 150/203 (73%), Gaps = 10/203 (4%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIW
Sbjct: 6 DEYDYIFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI K ++++V RW++ELR HADS+I I+L+GNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNK 125
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL---- 198
SDL +RAV ++A FAE L F E SAL+ NV+ AF +L EIY VS+K++
Sbjct: 126 SDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADRA 185
Query: 199 ----ECGNGKVD--GPPMLAGSK 215
GN VD PP G K
Sbjct: 186 AHDESPGNNVVDISVPPTTDGQK 208
>gi|6320869|ref|NP_010948.1| Ypt31p [Saccharomyces cerevisiae S288c]
gi|586807|sp|P38555.3|YPT31_YEAST RecName: Full=GTP-binding protein YPT31/YPT8; AltName: Full=Rab
GTPase YPT31
gi|425713|gb|AAA83385.1| GTPase-activating protein [Saccharomyces cerevisiae]
gi|603623|gb|AAB64564.1| Ypt31p [Saccharomyces cerevisiae]
gi|927541|emb|CAA51354.1| Ypt31p [Saccharomyces cerevisiae]
gi|151944741|gb|EDN63000.1| GTPase [Saccharomyces cerevisiae YJM789]
gi|207346004|gb|EDZ72632.1| YER031Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256271138|gb|EEU06231.1| Ypt31p [Saccharomyces cerevisiae JAY291]
gi|259145939|emb|CAY79199.1| Ypt31p [Saccharomyces cerevisiae EC1118]
gi|285811656|tpg|DAA07684.1| TPA: Ypt31p [Saccharomyces cerevisiae S288c]
gi|323305223|gb|EGA58970.1| Ypt31p [Saccharomyces cerevisiae FostersB]
gi|323309378|gb|EGA62595.1| Ypt31p [Saccharomyces cerevisiae FostersO]
gi|323333919|gb|EGA75308.1| Ypt31p [Saccharomyces cerevisiae AWRI796]
gi|323337933|gb|EGA79172.1| Ypt31p [Saccharomyces cerevisiae Vin13]
gi|323348967|gb|EGA83203.1| Ypt31p [Saccharomyces cerevisiae Lalvin QA23]
gi|323355434|gb|EGA87258.1| Ypt31p [Saccharomyces cerevisiae VL3]
gi|349577689|dbj|GAA22857.1| K7_Ypt31p [Saccharomyces cerevisiae Kyokai no. 7]
gi|365766056|gb|EHN07557.1| Ypt31p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392299721|gb|EIW10813.1| Ypt31p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 223
Score = 234 bits (597), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 117/216 (54%), Positives = 152/216 (70%), Gaps = 8/216 (3%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
D +FK+V+IGDS VGKS +LSRFTKNEF DSKSTIGVEF TRT+ I+GK IKAQIWDTA
Sbjct: 11 DLLFKIVLIGDSGVGKSNLLSRFTKNEFNMDSKSTIGVEFATRTLEIDGKRIKAQIWDTA 70
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQERYRA+TSAYYRGA+GA++VYDI+K S+++ W+ ELR +AD ++ + LIGNKSDL
Sbjct: 71 GQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLSELRENADDNVAVGLIGNKSDL 130
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECG---- 201
+RAV E++ FA++ L F+E SALN +NVD AF L+ IY VSK +++ G
Sbjct: 131 AHLRAVPTEESKTFAQENQLLFTETSALNSENVDKAFEELINTIYQKVSKHQMDLGDSSA 190
Query: 202 NGKVDGPPMLAGSKIDVISGADLEISEMKKLSTCSC 237
NG +G G I + + E KK + +C
Sbjct: 191 NGNANGASAPNGPTISLTPTPN----ENKKANGNNC 222
>gi|267527|sp|Q01111.1|YPT3_NICPL RecName: Full=Ras-related protein YPT3
gi|19715|emb|CAA45351.1| Np-ypt3 [Nicotiana plumbaginifolia]
Length = 218
Score = 234 bits (597), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 119/214 (55%), Positives = 157/214 (73%), Gaps = 4/214 (1%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FK+V+IGDS VGKS +LSRFTKNEF +SKSTIGVEF T+++ I+ K+IKAQIW
Sbjct: 8 DEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKSLNIDNKVIKAQIW 67
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYD+T+ ++++V RW++ELR H D +I ++LIGNK
Sbjct: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHVTYENVTRWLKELRDHTDPNIVVMLIGNK 127
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
SDL + AVS ++A AE +GL+F E SAL NV+ AF L +IY VSKK +E G+
Sbjct: 128 SDLRHLVAVSTDEAKGLAEREGLYFMETSALEATNVENAFTEALTQIYRIVSKKAVEAGD 187
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
+G A K + I+ D E S KK CS
Sbjct: 188 ---EGATSSAPPKGETINIKD-EGSSWKKFGCCS 217
>gi|50412303|ref|XP_457123.1| DEHA2B03696p [Debaryomyces hansenii CBS767]
gi|49652788|emb|CAG85116.1| DEHA2B03696p [Debaryomyces hansenii CBS767]
Length = 220
Score = 234 bits (597), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 109/191 (57%), Positives = 151/191 (79%), Gaps = 4/191 (2%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
+Y++K+V+IGDS VGKS +LSRFT++EF +S+STIGVEF TRT+ I+GK +KAQIWDTA
Sbjct: 13 EYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRVKAQIWDTA 72
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQERYRA+TSAYYRGA+GA++VYDI+K +S++ V+RW++EL+ HAD++I I L+GNKSDL
Sbjct: 73 GQERYRAITSAYYRGAVGALIVYDISKAESYESVSRWLKELKEHADANIVIELVGNKSDL 132
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNG-- 203
+RAV ++A FA + L F+EASAL+ DNVD +F +LL+ IY +SK +L+ G
Sbjct: 133 DHLRAVPTDEAKNFANENNLLFTEASALSSDNVDLSFHQLLKNIYEMISKHQLDTNEGSN 192
Query: 204 --KVDGPPMLA 212
K G P ++
Sbjct: 193 GNKPSGGPTIS 203
>gi|328773631|gb|EGF83668.1| hypothetical protein BATDEDRAFT_85182 [Batrachochytrium
dendrobatidis JAM81]
Length = 213
Score = 234 bits (597), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 117/199 (58%), Positives = 149/199 (74%), Gaps = 1/199 (0%)
Query: 20 MIPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKA 79
M D Y+FKVV+IGDS VGKS +LSRF +NEF DSKSTIGVEF TR++ +GK IK+
Sbjct: 1 MASDDYHYLFKVVLIGDSGVGKSNLLSRFARNEFNQDSKSTIGVEFATRSIEFDGKTIKS 60
Query: 80 QIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILI 139
QIWDTAGQERYRA+TSAYYRGA+GA++VYDI+++++F+ V RW++ELR HAD+SI I+L+
Sbjct: 61 QIWDTAGQERYRAITSAYYRGAVGALLVYDISQQKTFESVERWLKELRDHADASIVIMLV 120
Query: 140 GNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELE 199
GNKSDL +RAV E+A EFA L F E SAL+G NV+TAF +L +Y VS K +E
Sbjct: 121 GNKSDLKSLRAVPTEEAKEFATRNQLLFMETSALDGGNVETAFQDILANVYKVVSNKAME 180
Query: 200 CGNGKVDGPPMLAGSKIDV 218
+ +V P AG I V
Sbjct: 181 NESNRVATGPG-AGKSITV 198
>gi|169866639|ref|XP_001839906.1| GTPase [Coprinopsis cinerea okayama7#130]
gi|116498990|gb|EAU81885.1| GTPase [Coprinopsis cinerea okayama7#130]
Length = 209
Score = 234 bits (597), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 110/183 (60%), Positives = 144/183 (78%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK +KAQIWDTA
Sbjct: 8 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTVKAQIWDTA 67
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQERYRA+TSAYYRGA+GA++VYDI K ++ +V RW++ELR HADS+I I+L+GNKSDL
Sbjct: 68 GQERYRAITSAYYRGAVGALLVYDIAKHATYVNVTRWLKELRDHADSNIVIMLVGNKSDL 127
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNGKV 205
+RAV ++A FA + GL F E SAL+ NV++AF +L +IY VS K LE + +
Sbjct: 128 KHLRAVPTDEAKAFATENGLSFIETSALDASNVESAFQTILTDIYRIVSAKSLESSSTNI 187
Query: 206 DGP 208
+ P
Sbjct: 188 EPP 190
>gi|218204|dbj|BAA02437.1| GTP binding protein [Oryza sativa Japonica Group]
gi|446772|prf||1912297A rgp2 gene
Length = 217
Score = 234 bits (597), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 109/169 (64%), Positives = 139/169 (82%)
Query: 27 YVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTAG 86
Y+FK+V+IGD+ VGKS ILSRFT+N F DSKSTIGVEF T+++ + GK IKAQIWDTAG
Sbjct: 11 YLFKMVLIGDTGVGKSNILSRFTRNHFSLDSKSTIGVEFATKSLQMEGKTIKAQIWDTAG 70
Query: 87 QERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDLV 146
QERYRA+TSAYYRGA+GA++VYDITKRQSFD+V RW+ ELR HADSSI I+++GNKSDL+
Sbjct: 71 QERYRAITSAYYRGAVGALLVYDITKRQSFDNVHRWLRELRDHADSSIVIMMVGNKSDLI 130
Query: 147 DMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSK 195
+RAVS ++ AE +GLFF E SA+ NV+ AF ++ E+YG V++
Sbjct: 131 HLRAVSEDEGKALAEKEGLFFLETSAMEAVNVEEAFQTIITEVYGIVNR 179
>gi|225712522|gb|ACO12107.1| Ras-related protein Rab-11B [Lepeophtheirus salmonis]
gi|290561260|gb|ADD38032.1| Ras-related protein Rab-11B [Lepeophtheirus salmonis]
Length = 216
Score = 234 bits (597), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 117/203 (57%), Positives = 150/203 (73%), Gaps = 4/203 (1%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
++ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK +KAQIW
Sbjct: 6 EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTVKAQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI K ++++V RW+ ELR HADS+I I+L+GNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVDRWLRELRDHADSNIVIMLVGNK 125
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL---- 198
DL +RAV ++A FAE L F E SAL+ NV+TAF +L EIY VS+K L
Sbjct: 126 CDLRHLRAVPTDEAKHFAEQNNLSFIETSALDSTNVETAFHNILTEIYRIVSQKSLPDSG 185
Query: 199 ECGNGKVDGPPMLAGSKIDVISG 221
G G DG + GS + SG
Sbjct: 186 NSGAGPDDGSTIDIGSTVTENSG 208
>gi|68491615|ref|XP_710395.1| likely rab family GTP-binding protein [Candida albicans SC5314]
gi|68491632|ref|XP_710387.1| likely rab family GTP-binding protein [Candida albicans SC5314]
gi|46431579|gb|EAK91125.1| likely rab family GTP-binding protein [Candida albicans SC5314]
gi|46431588|gb|EAK91133.1| likely rab family GTP-binding protein [Candida albicans SC5314]
Length = 222
Score = 234 bits (597), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 108/179 (60%), Positives = 146/179 (81%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
+Y++K+V+IGDS VGKS +LSRFT++EF +S+STIGVEF TRT+ I+GK +KAQIWDTA
Sbjct: 13 EYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRVKAQIWDTA 72
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQERYRA+TSAYYRGA+GA++VYDI K +S++ V+RW++EL+ HAD++I I L+GNKSDL
Sbjct: 73 GQERYRAITSAYYRGAVGALIVYDIAKTESYESVSRWLKELKEHADANIIIELVGNKSDL 132
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNGK 204
+RAV E+A FA + L F+EASAL+ DNVD +F +LL+ IY +SK +LE + K
Sbjct: 133 DHLRAVPTEEAKNFAMENNLLFTEASALSSDNVDLSFHQLLKNIYEMISKHQLENNDSK 191
>gi|409082788|gb|EKM83146.1| hypothetical protein AGABI1DRAFT_82815 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426200656|gb|EKV50580.1| hypothetical protein AGABI2DRAFT_134329 [Agaricus bisporus var.
bisporus H97]
Length = 211
Score = 234 bits (597), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 109/183 (59%), Positives = 143/183 (78%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK +KAQIWDTA
Sbjct: 8 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTVKAQIWDTA 67
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQERYRA+TSAYYRGA+GA++VYDI K ++ +V RW++ELR HAD++I I+L+GNKSDL
Sbjct: 68 GQERYRAITSAYYRGAVGALLVYDIAKHATYVNVTRWLKELRDHADTNIVIMLVGNKSDL 127
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNGKV 205
+RAV ++A FA + GL F E SAL+ NV++AF +L +IY VS K LE +
Sbjct: 128 KHLRAVPTDEAKTFASENGLSFIETSALDASNVESAFQTILTDIYRIVSAKSLESSTSNI 187
Query: 206 DGP 208
+ P
Sbjct: 188 EPP 190
>gi|57524801|ref|NP_001005827.1| ras-related protein Rab-11A [Gallus gallus]
gi|82233797|sp|Q5ZJN2.1|RB11A_CHICK RecName: Full=Ras-related protein Rab-11A; Flags: Precursor
gi|53133464|emb|CAG32061.1| hypothetical protein RCJMB04_16p4 [Gallus gallus]
Length = 216
Score = 234 bits (597), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 111/176 (63%), Positives = 143/176 (81%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIW
Sbjct: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI K ++++V RW++ELR HADS+I I+L+GNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNK 125
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL 198
SDL +RAV ++A FAE GL F E SAL+ NV+ AF +L EIY VS+K++
Sbjct: 126 SDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQM 181
>gi|30584069|gb|AAP36283.1| Homo sapiens RAB11A, member RAS oncogene family [synthetic
construct]
gi|54697166|gb|AAV38955.1| RAB11A, member RAS oncogene family [synthetic construct]
gi|54697172|gb|AAV38958.1| RAB11A, member RAS oncogene family [synthetic construct]
gi|60653915|gb|AAX29650.1| RAB11A member RAS oncogene family [synthetic construct]
gi|61365501|gb|AAX42718.1| RAB11A member RAS oncogene family [synthetic construct]
gi|61365507|gb|AAX42719.1| RAB11A member RAS oncogene family [synthetic construct]
Length = 217
Score = 234 bits (597), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 111/176 (63%), Positives = 143/176 (81%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIW
Sbjct: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI K ++++V RW++ELR HADS+I I+L+GNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNK 125
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL 198
SDL +RAV ++A FAE GL F E SAL+ NV+ AF +L EIY VS+K++
Sbjct: 126 SDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQM 181
>gi|159906379|gb|ABX10878.1| RAB11B [Anas platyrhynchos]
Length = 216
Score = 234 bits (597), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 111/176 (63%), Positives = 143/176 (81%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIW
Sbjct: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI K ++++V RW++ELR HADS+I I+L+GNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNK 125
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL 198
SDL +RAV ++A FAE GL F E SAL+ NV+ AF +L EIY VS+K++
Sbjct: 126 SDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQM 181
>gi|224035169|gb|ACN36660.1| unknown [Zea mays]
gi|413954315|gb|AFW86964.1| ras protein RIC2 [Zea mays]
Length = 217
Score = 234 bits (597), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 114/214 (53%), Positives = 155/214 (72%), Gaps = 6/214 (2%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK++KAQIW
Sbjct: 9 DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKVVKAQIW 68
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYD+T+ +F++V RW++ELR H D +I ++L+GNK
Sbjct: 69 DTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLKELRDHTDPNIVVMLVGNK 128
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
SDL + AV ++ FAE + L+F E SAL NV+ AF +L +IY V K+ +E G
Sbjct: 129 SDLRHLVAVQTDEGKAFAERESLYFMETSALESTNVENAFAEVLAQIYRIVDKRAVEAGE 188
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
GP G KI++ ++S +KK CS
Sbjct: 189 DAASGPGR--GEKINIKD----DVSAVKKGGCCS 216
>gi|4758984|ref|NP_004654.1| ras-related protein Rab-11A isoform 1 [Homo sapiens]
gi|13592148|ref|NP_112414.1| ras-related protein Rab-11A [Rattus norvegicus]
gi|31980840|ref|NP_059078.2| ras-related protein Rab-11A [Mus musculus]
gi|54792725|ref|NP_001003276.1| ras-related protein Rab-11A [Canis lupus familiaris]
gi|72535192|ref|NP_001026958.1| ras-related protein Rab-11A [Sus scrofa]
gi|126722661|ref|NP_001075720.1| ras-related protein Rab-11A [Oryctolagus cuniculus]
gi|197102306|ref|NP_001127429.1| ras-related protein Rab-11A [Pongo abelii]
gi|387763102|ref|NP_001248718.1| ras-related protein Rab-11A [Macaca mulatta]
gi|114657631|ref|XP_510490.2| PREDICTED: uncharacterized protein LOC453523 isoform 2 [Pan
troglodytes]
gi|126277069|ref|XP_001367185.1| PREDICTED: ras-related protein Rab-11A-like isoform 1 [Monodelphis
domestica]
gi|296213515|ref|XP_002753302.1| PREDICTED: ras-related protein Rab-11A [Callithrix jacchus]
gi|301756939|ref|XP_002914304.1| PREDICTED: ras-related protein Rab-11A-like [Ailuropoda
melanoleuca]
gi|332235938|ref|XP_003267162.1| PREDICTED: ras-related protein Rab-11A isoform 1 [Nomascus
leucogenys]
gi|344293421|ref|XP_003418421.1| PREDICTED: ras-related protein Rab-11A-like [Loxodonta africana]
gi|348555429|ref|XP_003463526.1| PREDICTED: ras-related protein Rab-11A-like [Cavia porcellus]
gi|354493388|ref|XP_003508824.1| PREDICTED: ras-related protein Rab-11A-like [Cricetulus griseus]
gi|395822367|ref|XP_003784490.1| PREDICTED: ras-related protein Rab-11A [Otolemur garnettii]
gi|397515596|ref|XP_003828035.1| PREDICTED: ras-related protein Rab-11A isoform 1 [Pan paniscus]
gi|402874623|ref|XP_003901132.1| PREDICTED: ras-related protein Rab-11A isoform 1 [Papio anubis]
gi|403300395|ref|XP_003940926.1| PREDICTED: ras-related protein Rab-11A isoform 1 [Saimiri
boliviensis boliviensis]
gi|410960994|ref|XP_003987071.1| PREDICTED: ras-related protein Rab-11A [Felis catus]
gi|426232574|ref|XP_004010297.1| PREDICTED: ras-related protein Rab-11A [Ovis aries]
gi|426379447|ref|XP_004056409.1| PREDICTED: ras-related protein Rab-11A isoform 1 [Gorilla gorilla
gorilla]
gi|50402540|sp|P62494.3|RB11A_RAT RecName: Full=Ras-related protein Rab-11A; Short=Rab-11; AltName:
Full=24KG; Flags: Precursor
gi|50402541|sp|P62490.3|RB11A_CANFA RecName: Full=Ras-related protein Rab-11A; Short=Rab-11; Flags:
Precursor
gi|50402542|sp|P62491.3|RB11A_HUMAN RecName: Full=Ras-related protein Rab-11A; Short=Rab-11; AltName:
Full=YL8; Flags: Precursor
gi|50402543|sp|P62492.3|RB11A_MOUSE RecName: Full=Ras-related protein Rab-11A; Short=Rab-11; Flags:
Precursor
gi|50402544|sp|P62493.3|RB11A_RABIT RecName: Full=Ras-related protein Rab-11A; Short=Rab-11; Flags:
Precursor
gi|75056558|sp|Q52NJ1.3|RB11A_PIG RecName: Full=Ras-related protein Rab-11A; Flags: Precursor
gi|75070685|sp|Q5R9M7.3|RB11A_PONAB RecName: Full=Ras-related protein Rab-11A; Flags: Precursor
gi|20379068|gb|AAM21094.1|AF498946_1 small GTP binding protein RAB11A [Homo sapiens]
gi|917|emb|CAA39799.1| rab11 [Canis lupus familiaris]
gi|35889|emb|CAA37300.1| unnamed protein product [Homo sapiens]
gi|206567|gb|AAA42012.1| ras p21-like small GTP-binding protein [Rattus norvegicus]
gi|310067|gb|AAA31491.1| tubulovesicle-associated protein [Oryctolagus cuniculus]
gi|505541|emb|CAA40064.1| H rab11 small GTP binding protein [Homo sapiens]
gi|2149975|gb|AAC32887.1| rab11a [Homo sapiens]
gi|12852002|dbj|BAB29233.1| unnamed protein product [Mus musculus]
gi|14715109|gb|AAH10722.1| RAB11a, member RAS oncogene family [Mus musculus]
gi|15426487|gb|AAH13348.1| RAB11A protein [Homo sapiens]
gi|47115275|emb|CAG28597.1| RAB11A [Homo sapiens]
gi|49168474|emb|CAG38732.1| RAB11A [Homo sapiens]
gi|54697162|gb|AAV38953.1| RAB11A, member RAS oncogene family [Homo sapiens]
gi|54697168|gb|AAV38956.1| RAB11A, member RAS oncogene family [Homo sapiens]
gi|55249677|gb|AAH85727.1| RAB11a, member RAS oncogene family [Rattus norvegicus]
gi|55729608|emb|CAH91533.1| hypothetical protein [Pongo abelii]
gi|61355506|gb|AAX41147.1| RAB11A member RAS oncogene family [synthetic construct]
gi|61355514|gb|AAX41148.1| RAB11A member RAS oncogene family [synthetic construct]
gi|62868644|gb|AAY17510.1| Ras-related protein Rab-11A [Sus scrofa]
gi|74151140|dbj|BAE27693.1| unnamed protein product [Mus musculus]
gi|74204974|dbj|BAE20971.1| unnamed protein product [Mus musculus]
gi|74205093|dbj|BAE21003.1| unnamed protein product [Mus musculus]
gi|112292979|dbj|BAF02867.1| Rab11A [Mus musculus]
gi|119598158|gb|EAW77752.1| RAB11A, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119598159|gb|EAW77753.1| RAB11A, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|123992443|gb|ABM83980.1| RAB11A, member RAS oncogene family [synthetic construct]
gi|123999492|gb|ABM87302.1| RAB11A, member RAS oncogene family [synthetic construct]
gi|148694121|gb|EDL26068.1| RAB11a, member RAS oncogene family [Mus musculus]
gi|149041958|gb|EDL95799.1| RAB11a, member RAS oncogene family [Rattus norvegicus]
gi|189053091|dbj|BAG34713.1| unnamed protein product [Homo sapiens]
gi|296483650|tpg|DAA25765.1| TPA: Ras-related protein Rab-11A [Bos taurus]
gi|344235576|gb|EGV91679.1| Ras-related protein Rab-11A [Cricetulus griseus]
gi|351695550|gb|EHA98468.1| Ras-related protein Rab-11A [Heterocephalus glaber]
gi|355692810|gb|EHH27413.1| hypothetical protein EGK_17606 [Macaca mulatta]
gi|355778116|gb|EHH63152.1| hypothetical protein EGM_16064 [Macaca fascicularis]
gi|380817586|gb|AFE80667.1| ras-related protein Rab-11A isoform 1 [Macaca mulatta]
gi|383422481|gb|AFH34454.1| ras-related protein Rab-11A isoform 1 [Macaca mulatta]
gi|384950094|gb|AFI38652.1| ras-related protein Rab-11A isoform 1 [Macaca mulatta]
gi|410220856|gb|JAA07647.1| RAB11A, member RAS oncogene family [Pan troglodytes]
gi|410306776|gb|JAA31988.1| RAB11A, member RAS oncogene family [Pan troglodytes]
gi|410342705|gb|JAA40299.1| RAB11A, member RAS oncogene family [Pan troglodytes]
gi|431895896|gb|ELK05314.1| Ras-related protein Rab-11A [Pteropus alecto]
gi|432092221|gb|ELK24845.1| Ras-related protein Rab-11A [Myotis davidii]
gi|1089909|prf||2018147A GTP-binding protein rab11
Length = 216
Score = 234 bits (597), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 111/176 (63%), Positives = 143/176 (81%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIW
Sbjct: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI K ++++V RW++ELR HADS+I I+L+GNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNK 125
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL 198
SDL +RAV ++A FAE GL F E SAL+ NV+ AF +L EIY VS+K++
Sbjct: 126 SDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQM 181
>gi|187609401|pdb|3CPJ|B Chain B, Crystal Structure Of Ypt31 In Complex With Yeast Rab-Gdi
Length = 223
Score = 234 bits (597), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 117/216 (54%), Positives = 151/216 (69%), Gaps = 8/216 (3%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
D +FK+V+IGDS VGKS +LSRFTKNEF DSKSTIGVEF TRT+ I GK IKAQIWDTA
Sbjct: 11 DLLFKIVLIGDSGVGKSNLLSRFTKNEFNMDSKSTIGVEFATRTLEIEGKRIKAQIWDTA 70
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQERYRA+TSAYYRGA+GA++VYDI+K S+++ W+ ELR +AD ++ + LIGNKSDL
Sbjct: 71 GQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLSELRENADDNVAVGLIGNKSDL 130
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECG---- 201
+RAV E++ FA++ L F+E SALN +NVD AF L+ IY VSK +++ G
Sbjct: 131 AHLRAVPTEESKTFAQENQLLFTETSALNSENVDKAFEELINTIYQKVSKHQMDLGDSSA 190
Query: 202 NGKVDGPPMLAGSKIDVISGADLEISEMKKLSTCSC 237
NG +G G I + + E KK + +C
Sbjct: 191 NGNANGASAPNGPTISLTPTPN----ENKKANGNNC 222
>gi|387017926|gb|AFJ51081.1| ras-related protein Rab-11A [Crotalus adamanteus]
Length = 217
Score = 234 bits (597), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 111/176 (63%), Positives = 143/176 (81%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIW
Sbjct: 7 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIW 66
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI K ++++V RW++ELR HADS+I I+L+GNK
Sbjct: 67 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNK 126
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL 198
SDL +RAV ++A FAE GL F E SAL+ NV+ AF +L EIY VS+K++
Sbjct: 127 SDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQM 182
>gi|190347699|gb|EDK40024.2| hypothetical protein PGUG_04122 [Meyerozyma guilliermondii ATCC
6260]
Length = 218
Score = 234 bits (597), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 109/188 (57%), Positives = 150/188 (79%), Gaps = 3/188 (1%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
+Y++K+V+IGDS VGKS +LSRFT++EF +S+STIGVEF TRT+ I+G+ +KAQIWDTA
Sbjct: 13 EYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGRRVKAQIWDTA 72
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQERYRA+TSAYYRGA+GA++VYDI+K +S++ V+RW++EL+ HAD++I I L+GNKSDL
Sbjct: 73 GQERYRAITSAYYRGAVGALIVYDISKTESYESVSRWLKELKEHADTNIVIELVGNKSDL 132
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELEC---GN 202
+RAV E+A FA + L F+EASAL+ DNVD +F +LL+ IY +SK +L+ G
Sbjct: 133 DHLRAVPTEEAKSFANENSLLFTEASALSSDNVDLSFHQLLKNIYEMISKHQLDTNDQGA 192
Query: 203 GKVDGPPM 210
K GP +
Sbjct: 193 QKPSGPTI 200
>gi|46561764|gb|AAT01087.1| putative rab11 [Homalodisca vitripennis]
Length = 215
Score = 234 bits (597), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 111/176 (63%), Positives = 142/176 (80%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIW
Sbjct: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI K ++++V RW+ ELR HAD +I I+L+GNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNK 125
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL 198
SDL +RAV ++A FAE GL F E SAL+ NV+TAF +L EIY VS+K++
Sbjct: 126 SDLRHLRAVPTDEARTFAERNGLSFIETSALDSTNVETAFHNILTEIYRIVSQKQI 181
>gi|296422463|ref|XP_002840780.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295637003|emb|CAZ84971.1| unnamed protein product [Tuber melanosporum]
Length = 212
Score = 234 bits (596), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 113/183 (61%), Positives = 145/183 (79%)
Query: 20 MIPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKA 79
M D+ D++FKVV+IGDS VGKS +LSRFT+NEF DSKSTIGVEF TR++ ++ K IKA
Sbjct: 1 MANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDTKTIKA 60
Query: 80 QIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILI 139
QIWDTAGQERYRA+TSAYYRGA+GA++VYDI+K+ ++D+V RW++ELR HAD++I I+L+
Sbjct: 61 QIWDTAGQERYRAITSAYYRGAVGALLVYDISKQITYDNVTRWLKELRDHADNNIVIMLV 120
Query: 140 GNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELE 199
GNKSDL +RAV EDA FA + L F E SAL+ NV+ AF +L EIY VS K L+
Sbjct: 121 GNKSDLRHLRAVPTEDAKNFAAENHLSFIETSALDSTNVELAFQTILTEIYRIVSSKALD 180
Query: 200 CGN 202
G+
Sbjct: 181 GGD 183
>gi|328778735|ref|XP_623997.2| PREDICTED: ras-related protein Rab-11A [Apis mellifera]
Length = 249
Score = 234 bits (596), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 111/176 (63%), Positives = 142/176 (80%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIW
Sbjct: 40 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIW 99
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI K ++++V RW+ ELR HAD +I I+L+GNK
Sbjct: 100 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNK 159
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL 198
SDL +RAV ++A FAE GL F E SAL+ NV+TAF +L EIY VS+K++
Sbjct: 160 SDLRHLRAVPTDEAKAFAEKNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQI 215
>gi|440910197|gb|ELR60022.1| Ras-related protein Rab-11B, partial [Bos grunniens mutus]
Length = 225
Score = 234 bits (596), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 118/203 (58%), Positives = 150/203 (73%), Gaps = 10/203 (4%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIW
Sbjct: 13 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIW 72
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI K ++++V RW++ELR HADS+I I+L+GNK
Sbjct: 73 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNK 132
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL---- 198
SDL +RAV ++A FAE L F E SAL+ NV+ AF +L EIY VS+K++
Sbjct: 133 SDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADRA 192
Query: 199 ----ECGNGKVD--GPPMLAGSK 215
GN VD PP G K
Sbjct: 193 AHDESPGNNVVDISVPPTTDGQK 215
>gi|224129448|ref|XP_002328719.1| predicted protein [Populus trichocarpa]
gi|118484335|gb|ABK94045.1| unknown [Populus trichocarpa]
gi|222839017|gb|EEE77368.1| predicted protein [Populus trichocarpa]
Length = 215
Score = 234 bits (596), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 110/171 (64%), Positives = 140/171 (81%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
++ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TRT+ + G+ +KAQIW
Sbjct: 7 EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQIW 66
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGALGA++VYD+TK +F++V+RW++ELR HADS+I I+LIGNK
Sbjct: 67 DTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMLIGNK 126
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAV 193
+DL +RAV+ EDA +AE +GL F E SAL NV+ AF +L EIY V
Sbjct: 127 TDLKHLRAVATEDAQSYAEKEGLAFIETSALEATNVEKAFQTILSEIYRIV 177
>gi|383854058|ref|XP_003702539.1| PREDICTED: ras-related protein Rab-11A-like [Megachile rotundata]
Length = 238
Score = 234 bits (596), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 111/176 (63%), Positives = 142/176 (80%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIW
Sbjct: 29 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIW 88
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI K ++++V RW+ ELR HAD +I I+L+GNK
Sbjct: 89 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNK 148
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL 198
SDL +RAV ++A FAE GL F E SAL+ NV+TAF +L EIY VS+K++
Sbjct: 149 SDLRHLRAVPTDEAKAFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQI 204
>gi|301785982|ref|XP_002928408.1| PREDICTED: ras-related protein Rab-11B-like [Ailuropoda
melanoleuca]
Length = 274
Score = 234 bits (596), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 118/203 (58%), Positives = 150/203 (73%), Gaps = 10/203 (4%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIW
Sbjct: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI K ++++V RW++ELR HADS+I I+L+GNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNK 125
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL---- 198
SDL +RAV ++A FAE L F E SAL+ NV+ AF +L EIY VS+K++
Sbjct: 126 SDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADRA 185
Query: 199 ----ECGNGKVD--GPPMLAGSK 215
GN VD PP G K
Sbjct: 186 AHDESPGNNVVDISVPPTTDGQK 208
>gi|326492460|dbj|BAK02013.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326496423|dbj|BAJ94673.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 222
Score = 234 bits (596), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 114/176 (64%), Positives = 141/176 (80%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGKS +LSRFTKN F DSKSTIGVEF TRT + GK IKAQIW
Sbjct: 14 DEYDYLFKVVLIGDSGVGKSNLLSRFTKNTFSLDSKSTIGVEFATRTTQVEGKTIKAQIW 73
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYD+TK +F++V RW++ELR HADS+I I+LIGNK
Sbjct: 74 DTAGQERYRAITSAYYRGAVGALLVYDVTKAATFENVKRWLKELRDHADSNIVIMLIGNK 133
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL 198
+DL +R+V+ + A FAE +GL F E SAL+ NVD AF +L EI+ +SKK L
Sbjct: 134 TDLRHLRSVATDKAAGFAEWEGLSFIETSALDATNVDKAFQTVLAEIHRVISKKAL 189
>gi|14249144|ref|NP_116006.1| ras-related protein Rab-11B [Rattus norvegicus]
gi|78369332|ref|NP_001030468.1| ras-related protein Rab-11B [Bos taurus]
gi|190358517|ref|NP_004209.2| ras-related protein Rab-11B [Homo sapiens]
gi|226529709|ref|NP_001142168.1| uncharacterized protein LOC100274335 [Zea mays]
gi|349585085|ref|NP_001231804.1| RAB11B, member RAS oncogene family [Sus scrofa]
gi|387762845|ref|NP_001248413.1| ras-related protein Rab-11B [Macaca mulatta]
gi|297703412|ref|XP_002828633.1| PREDICTED: ras-related protein Rab-11B [Pongo abelii]
gi|332264185|ref|XP_003281127.1| PREDICTED: ras-related protein Rab-11B isoform 1 [Nomascus
leucogenys]
gi|332852540|ref|XP_001147785.2| PREDICTED: ras-related protein Rab-11B [Pan troglodytes]
gi|344299320|ref|XP_003421334.1| PREDICTED: ras-related protein Rab-11B-like [Loxodonta africana]
gi|345786671|ref|XP_854399.2| PREDICTED: ras-related protein Rab-11B [Canis lupus familiaris]
gi|354496877|ref|XP_003510550.1| PREDICTED: ras-related protein Rab-11B-like [Cricetulus griseus]
gi|397477329|ref|XP_003810025.1| PREDICTED: ras-related protein Rab-11B [Pan paniscus]
gi|402904037|ref|XP_003914857.1| PREDICTED: ras-related protein Rab-11B [Papio anubis]
gi|403296089|ref|XP_003938953.1| PREDICTED: ras-related protein Rab-11B [Saimiri boliviensis
boliviensis]
gi|426229069|ref|XP_004008616.1| PREDICTED: ras-related protein Rab-11B [Ovis aries]
gi|426387018|ref|XP_004059975.1| PREDICTED: ras-related protein Rab-11B [Gorilla gorilla gorilla]
gi|38258938|sp|Q15907.4|RB11B_HUMAN RecName: Full=Ras-related protein Rab-11B; AltName:
Full=GTP-binding protein YPT3; Flags: Precursor
gi|50403673|sp|O35509.4|RB11B_RAT RecName: Full=Ras-related protein Rab-11B; Flags: Precursor
gi|108860922|sp|Q3MHP2.3|RB11B_BOVIN RecName: Full=Ras-related protein Rab-11B; Flags: Precursor
gi|9837357|gb|AAG00542.1|AF286534_1 GTP-binding protein RAB11B [Rattus norvegicus]
gi|20379070|gb|AAM21095.1|AF498947_1 small GTP binding protein RAB11B [Homo sapiens]
gi|38303833|gb|AAH62041.1| RAB11B, member RAS oncogene family [Rattus norvegicus]
gi|54695942|gb|AAV38343.1| RAB11B, member RAS oncogene family [Homo sapiens]
gi|61355645|gb|AAX41161.1| RAB11B member RAS oncogene family [synthetic construct]
gi|75773827|gb|AAI05163.1| RAB11B, member RAS oncogene family [Bos taurus]
gi|82414868|gb|AAI10082.1| RAB11B, member RAS oncogene family [Homo sapiens]
gi|90085246|dbj|BAE91364.1| unnamed protein product [Macaca fascicularis]
gi|119589331|gb|EAW68925.1| RAB11B, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119589333|gb|EAW68927.1| RAB11B, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|149031659|gb|EDL86622.1| RAB11B, member RAS oncogene family [Rattus norvegicus]
gi|189066581|dbj|BAG35831.1| unnamed protein product [Homo sapiens]
gi|194707448|gb|ACF87808.1| unknown [Zea mays]
gi|296485751|tpg|DAA27866.1| TPA: ras-related protein Rab-11B [Bos taurus]
gi|307686193|dbj|BAJ21027.1| RAB11B, member RAS oncogene family [synthetic construct]
gi|344244036|gb|EGW00140.1| Ras-related protein Rab-11B [Cricetulus griseus]
gi|380817956|gb|AFE80852.1| ras-related protein Rab-11B [Macaca mulatta]
gi|383422851|gb|AFH34639.1| ras-related protein Rab-11B [Macaca mulatta]
gi|385281372|gb|AFI57838.1| ras-related protein Rab-11B [Capra hircus]
gi|410217180|gb|JAA05809.1| RAB11B, member RAS oncogene family [Pan troglodytes]
gi|410217182|gb|JAA05810.1| RAB11B, member RAS oncogene family [Pan troglodytes]
gi|410257678|gb|JAA16806.1| RAB11B, member RAS oncogene family [Pan troglodytes]
gi|410301334|gb|JAA29267.1| RAB11B, member RAS oncogene family [Pan troglodytes]
gi|410337015|gb|JAA37454.1| RAB11B, member RAS oncogene family [Pan troglodytes]
gi|432104449|gb|ELK31073.1| Ras-related protein Rab-11B [Myotis davidii]
Length = 218
Score = 234 bits (596), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 118/203 (58%), Positives = 150/203 (73%), Gaps = 10/203 (4%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIW
Sbjct: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI K ++++V RW++ELR HADS+I I+L+GNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNK 125
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL---- 198
SDL +RAV ++A FAE L F E SAL+ NV+ AF +L EIY VS+K++
Sbjct: 126 SDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADRA 185
Query: 199 ----ECGNGKVD--GPPMLAGSK 215
GN VD PP G K
Sbjct: 186 AHDESPGNNVVDISVPPTTDGQK 208
>gi|156551916|ref|XP_001607057.1| PREDICTED: ras-related protein Rab-11A-like [Nasonia vitripennis]
Length = 215
Score = 234 bits (596), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 111/176 (63%), Positives = 142/176 (80%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIW
Sbjct: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI K ++++V RW+ ELR HAD +I I+L+GNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNK 125
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL 198
SDL +RAV ++A FAE GL F E SAL+ NV+TAF +L EIY VS+K++
Sbjct: 126 SDLRHLRAVPTDEAKTFAEKNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQI 181
>gi|159906375|gb|ABX10876.1| RAB11B [Capra hircus]
Length = 218
Score = 234 bits (596), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 118/203 (58%), Positives = 150/203 (73%), Gaps = 10/203 (4%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIW
Sbjct: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI K ++++V RW++ELR HADS+I I+L+GNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNK 125
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL---- 198
SDL +RAV ++A FAE L F E SAL+ NV+ AF +L EIY VS+K++
Sbjct: 126 SDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADRA 185
Query: 199 ----ECGNGKVD--GPPMLAGSK 215
GN VD PP G K
Sbjct: 186 AHDESPGNNVVDISVPPTTDGQK 208
>gi|410950267|ref|XP_003981831.1| PREDICTED: ras-related protein Rab-11B [Felis catus]
Length = 218
Score = 234 bits (596), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 118/203 (58%), Positives = 150/203 (73%), Gaps = 10/203 (4%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIW
Sbjct: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI K ++++V RW++ELR HADS+I I+L+GNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNK 125
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL---- 198
SDL +RAV ++A FAE L F E SAL+ NV+ AF +L EIY VS+K++
Sbjct: 126 SDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADRA 185
Query: 199 ----ECGNGKVD--GPPMLAGSK 215
GN VD PP G K
Sbjct: 186 AHDESPGNNVVDISVPPTTDGQK 208
>gi|351701311|gb|EHB04230.1| Ras-related protein Rab-11B [Heterocephalus glaber]
Length = 218
Score = 234 bits (596), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 118/203 (58%), Positives = 150/203 (73%), Gaps = 10/203 (4%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIW
Sbjct: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI K ++++V RW++ELR HADS+I I+L+GNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNK 125
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL---- 198
SDL +RAV ++A FAE L F E SAL+ NV+ AF +L EIY VS+K++
Sbjct: 126 SDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADRA 185
Query: 199 ----ECGNGKVD--GPPMLAGSK 215
GN VD PP G K
Sbjct: 186 AHDESPGNNVVDISVPPTTDGQK 208
>gi|148342496|gb|ABQ59034.1| RAB11B protein [Homo sapiens]
gi|254071179|gb|ACT64349.1| RAB11B, member RAS oncogene family protein [synthetic construct]
gi|254071181|gb|ACT64350.1| RAB11B, member RAS oncogene family protein [synthetic construct]
Length = 218
Score = 234 bits (596), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 118/203 (58%), Positives = 150/203 (73%), Gaps = 10/203 (4%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIW
Sbjct: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI K ++++V RW++ELR HADS+I I+L+GNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNK 125
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL---- 198
SDL +RAV ++A FAE L F E SAL+ NV+ AF +L EIY VS+K++
Sbjct: 126 SDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADRA 185
Query: 199 ----ECGNGKVD--GPPMLAGSK 215
GN VD PP G K
Sbjct: 186 AHDESPGNNVVDISVPPTTDGQK 208
>gi|195650695|gb|ACG44815.1| ras-related protein Rab11B [Zea mays]
Length = 220
Score = 234 bits (596), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 114/214 (53%), Positives = 156/214 (72%), Gaps = 4/214 (1%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
++ DY+FKVV+IGDS VGKS +LSRF ++EF +++STIGVEF T+TV ++ K++KAQIW
Sbjct: 9 EEYDYLFKVVLIGDSGVGKSNLLSRFARDEFSLETRSTIGVEFATKTVQVDDKLVKAQIW 68
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA+VVYD+++R +FD+ RW+ E R H D++I ++L+GNK
Sbjct: 69 DTAGQERYRAITSAYYRGAVGALVVYDVSRRTTFDNAERWLREPRDHTDANIVVMLVGNK 128
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
+DL +RAVS EDA FAE G F E SAL+ NV+ AF +L++IY VS+ L+ G+
Sbjct: 129 ADLRHLRAVSPEDAAAFAERHGTFSMETSALDATNVERAFAEVLRQIYHVVSRNALDIGD 188
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
PP G IDV + D E+S + CS
Sbjct: 189 DPA-APPR--GKTIDVSAAKD-EVSPVNAGGCCS 218
>gi|449521271|ref|XP_004167653.1| PREDICTED: ras-related protein Rab11D-like [Cucumis sativus]
Length = 217
Score = 234 bits (596), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 118/215 (54%), Positives = 156/215 (72%), Gaps = 7/215 (3%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D DY+FKVV+IGDS VGKS +LSRFTKNEF +SKSTIGVEF TRT+ ++GK+IKAQIW
Sbjct: 8 DDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGKVIKAQIW 67
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQ RYRA+TSAYYRGA+GA++VYD+T+ +F++V RW++EL+ H DS+I ++L+GNK
Sbjct: 68 DTAGQGRYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIVVMLVGNK 127
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECG- 201
SDL + AV ED +AE + L+F E SAL NV+ AF +L +IY VSKK +E G
Sbjct: 128 SDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHIVSKKAVEGGE 187
Query: 202 NGKVDGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
NG P G KI++ + S + ++ CS
Sbjct: 188 NGSASAVPA-QGEKINI-----KDESGLNRIKCCS 216
>gi|119497347|ref|XP_001265432.1| Ras GTPase Rab11, putative [Neosartorya fischeri NRRL 181]
gi|119413594|gb|EAW23535.1| Ras GTPase Rab11, putative [Neosartorya fischeri NRRL 181]
Length = 224
Score = 234 bits (596), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 119/220 (54%), Positives = 155/220 (70%), Gaps = 16/220 (7%)
Query: 20 MIPDKIDYVFK--------------VVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEF 65
M D+ D++FK +V+IGDS VGKS +LSRFT+NEF DSKSTIGVEF
Sbjct: 1 MANDEYDFLFKGNVATFPAQSPQVSLVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEF 60
Query: 66 QTRTVTINGKIIKAQIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEE 125
TR++ ++ K IKAQIWDTAGQERYRA+TSAYYRGA+GA++VYDI+K Q++D+V RW++E
Sbjct: 61 ATRSIQVDSKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYDNVNRWLKE 120
Query: 126 LRAHADSSIRIILIGNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRL 185
LR HADS+I I+L+GNKSDL +RAV ++A +FA + L F E SAL+ NV+ AF +
Sbjct: 121 LRDHADSNIVIMLVGNKSDLRHLRAVPTDEAKQFASENNLSFIETSALDASNVELAFQNI 180
Query: 186 LQEIYGAVSKKELECGNGKVDGPPMLAGSKIDVISGADLE 225
L EIY VS K L+ NG P+ +G I+V D E
Sbjct: 181 LTEIYRIVSSKALD--NGDSGQAPLSSGRTIEVSKAPDTE 218
>gi|190405593|gb|EDV08860.1| GTP-binding protein YPT31/YPT8 [Saccharomyces cerevisiae RM11-1a]
Length = 223
Score = 234 bits (596), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 117/216 (54%), Positives = 151/216 (69%), Gaps = 8/216 (3%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
D +FK+V+IGDS VGKS +LSRFTKNEF DSKSTIGVEF TRT+ I+GK IKAQIWDTA
Sbjct: 11 DLLFKIVLIGDSGVGKSNLLSRFTKNEFNMDSKSTIGVEFATRTLEIDGKRIKAQIWDTA 70
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQERYRA+TSAYYRGA+GA++VYDI+K S+++ W+ ELR AD ++ + LIGNKSDL
Sbjct: 71 GQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLSELREKADDNVAVGLIGNKSDL 130
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECG---- 201
+RAV E++ FA++ L F+E SALN +NVD AF L+ IY VSK +++ G
Sbjct: 131 AHLRAVPTEESKTFAQENQLLFTETSALNSENVDKAFEELINTIYQKVSKHQMDLGDSSA 190
Query: 202 NGKVDGPPMLAGSKIDVISGADLEISEMKKLSTCSC 237
NG +G G I + + E KK + +C
Sbjct: 191 NGNANGASAPNGPTISLTPTPN----ENKKANGNNC 222
>gi|242087345|ref|XP_002439505.1| hypothetical protein SORBIDRAFT_09g008430 [Sorghum bicolor]
gi|241944790|gb|EES17935.1| hypothetical protein SORBIDRAFT_09g008430 [Sorghum bicolor]
Length = 217
Score = 233 bits (595), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 108/169 (63%), Positives = 140/169 (82%)
Query: 27 YVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTAG 86
Y+FK+V+IGDS VGKS ILSRFT+N F DSKSTIGVEF T+++ ++GK IKAQIWDTAG
Sbjct: 11 YLFKMVLIGDSGVGKSNILSRFTRNHFSLDSKSTIGVEFATKSLQMDGKTIKAQIWDTAG 70
Query: 87 QERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDLV 146
QERYRA+TSAYYRGA+GA++VYDITKRQSF++V RW+ ELR HADSSI I+++GNKSDL+
Sbjct: 71 QERYRAITSAYYRGAVGALLVYDITKRQSFENVHRWLRELRDHADSSIVIMMVGNKSDLI 130
Query: 147 DMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSK 195
+RA+S ++ AE +GLFF E SA+ NV+ AF ++ E+YG V++
Sbjct: 131 HLRAISEDEGKALAEKEGLFFLETSAMEAINVEEAFQTIITEVYGIVNR 179
>gi|225712176|gb|ACO11934.1| Ras-related protein Rab-11B [Lepeophtheirus salmonis]
Length = 216
Score = 233 bits (595), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 116/203 (57%), Positives = 150/203 (73%), Gaps = 4/203 (1%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
++ DY+F+VV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK +KAQIW
Sbjct: 6 EEYDYLFRVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTVKAQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI K ++++V RW+ ELR HADS+I I+L+GNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVDRWLRELRDHADSNIVIMLVGNK 125
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL---- 198
DL +RAV ++A FAE L F E SAL+ NV+TAF +L EIY VS+K L
Sbjct: 126 CDLRHLRAVPTDEAKHFAEQNNLSFIETSALDSTNVETAFHNILTEIYRIVSRKSLPDSG 185
Query: 199 ECGNGKVDGPPMLAGSKIDVISG 221
G G DG + GS + SG
Sbjct: 186 NSGAGPDDGSTIDIGSTVTENSG 208
>gi|380017257|ref|XP_003692576.1| PREDICTED: ras-related protein Rab-11A-like [Apis florea]
Length = 215
Score = 233 bits (595), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 111/176 (63%), Positives = 142/176 (80%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIW
Sbjct: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI K ++++V RW+ ELR HAD +I I+L+GNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNK 125
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL 198
SDL +RAV ++A FAE GL F E SAL+ NV+TAF +L EIY VS+K++
Sbjct: 126 SDLRHLRAVPTDEAKAFAEKNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQI 181
>gi|241959082|ref|XP_002422260.1| GTP-binding protein, putative; Rab GTPase, putative [Candida
dubliniensis CD36]
gi|223645605|emb|CAX40264.1| GTP-binding protein, putative [Candida dubliniensis CD36]
gi|238880161|gb|EEQ43799.1| GTP-binding protein YPT31/YPT8 [Candida albicans WO-1]
Length = 219
Score = 233 bits (595), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 108/179 (60%), Positives = 146/179 (81%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
+Y++K+V+IGDS VGKS +LSRFT++EF +S+STIGVEF TRT+ I+GK +KAQIWDTA
Sbjct: 13 EYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRVKAQIWDTA 72
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQERYRA+TSAYYRGA+GA++VYDI K +S++ V+RW++EL+ HAD++I I L+GNKSDL
Sbjct: 73 GQERYRAITSAYYRGAVGALIVYDIAKTESYESVSRWLKELKEHADANIIIELVGNKSDL 132
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNGK 204
+RAV E+A FA + L F+EASAL+ DNVD +F +LL+ IY +SK +LE + K
Sbjct: 133 DHLRAVPTEEAKNFAMENNLLFTEASALSSDNVDLSFHQLLKNIYEMISKHQLENNDSK 191
>gi|159467367|ref|XP_001691863.1| small rab-related GTPase [Chlamydomonas reinhardtii]
gi|3025293|sp|Q39572.1|YPTC6_CHLRE RecName: Full=Ras-related protein YPTC6
gi|806728|gb|AAA82729.1| YptC6 [Chlamydomonas reinhardtii]
gi|158278590|gb|EDP04353.1| small rab-related GTPase [Chlamydomonas reinhardtii]
Length = 216
Score = 233 bits (595), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 119/200 (59%), Positives = 150/200 (75%), Gaps = 3/200 (1%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIW
Sbjct: 7 DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIQVDGKTIKAQIW 66
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDITK +F++V RW++ELR HADS+I I+L+GNK
Sbjct: 67 DTAGQERYRAITSAYYRGAVGALLVYDITKSVTFENVERWLKELRDHADSNIVIMLVGNK 126
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
SDL +R V E A F E +GL F E SAL NV+ AF ++L EIY VSKK L+ +
Sbjct: 127 SDLKHLRDVQTEVAQAFCEREGLSFIETSALESTNVEKAFQQILTEIYHIVSKKVLDSED 186
Query: 203 GKVDGPPMLAGSKIDVISGA 222
+ P + G + VI A
Sbjct: 187 NR---PKIGEGRDVIVIDNA 203
>gi|21536533|gb|AAM60865.1| Rab-type small GTP-binding protein-like [Arabidopsis thaliana]
Length = 216
Score = 233 bits (595), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 117/214 (54%), Positives = 155/214 (72%), Gaps = 6/214 (2%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGKS +LS FTKNEF +SKSTIGVEF TR++ ++ K+IKAQIW
Sbjct: 8 DEYDYLFKVVLIGDSGVGKSNLLSLFTKNEFSLESKSTIGVEFATRSLNVDDKVIKAQIW 67
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYD+T+ +F++V W++ELR H D +I ++L+GNK
Sbjct: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVETWLKELRNHTDPNIVVMLVGNK 127
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
SDL + AV EDA FAE + L+F E SA NV+ AF +L +I+ VSKK +E +
Sbjct: 128 SDLRHLVAVQTEDAKSFAEKESLYFMETSAFEATNVENAFAEVLTQIHHIVSKKAMEAAS 187
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
+ P G KID+ G D +S +KK CS
Sbjct: 188 ESANVPS--KGDKIDI--GKD--VSAVKKGGCCS 215
>gi|401626081|gb|EJS44046.1| ypt31p [Saccharomyces arboricola H-6]
Length = 223
Score = 233 bits (595), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 115/201 (57%), Positives = 146/201 (72%), Gaps = 4/201 (1%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
D +FK+V+IGDS VGKS +LSRFTKNEF DSKSTIGVEF TRT+ I+GK IKAQIWDTA
Sbjct: 11 DLLFKIVLIGDSGVGKSNLLSRFTKNEFNMDSKSTIGVEFATRTLEIDGKRIKAQIWDTA 70
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQERYRA+TSAYYRGA+GA++VYDI+K S+++ W+ ELR +AD ++ + LIGNKSDL
Sbjct: 71 GQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLSELRENADDNVAVGLIGNKSDL 130
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECG---- 201
+RAV E++ FA + L F+E SALN +NVD AF L+ IY VSK +++ G
Sbjct: 131 AHLRAVPTEESKTFALENQLLFTETSALNSENVDKAFEELINTIYQKVSKHQMDLGDSAA 190
Query: 202 NGKVDGPPMLAGSKIDVISGA 222
NG +G L G I + A
Sbjct: 191 NGNANGMSALNGPTISLTPTA 211
>gi|240254578|ref|NP_180943.4| RAB GTPaselike protein A1H [Arabidopsis thaliana]
gi|297826865|ref|XP_002881315.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|122244089|sp|Q1PEX3.1|RAA1H_ARATH RecName: Full=Ras-related protein RABA1h; Short=AtRABA1h
gi|91806311|gb|ABE65883.1| Ras-like GTP-binding protein [Arabidopsis thaliana]
gi|297327154|gb|EFH57574.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|330253807|gb|AEC08901.1| RAB GTPaselike protein A1H [Arabidopsis thaliana]
Length = 218
Score = 233 bits (595), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 114/214 (53%), Positives = 157/214 (73%), Gaps = 4/214 (1%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D DY+FKVV+ GDS VGKS +LSRFT+N+F DS+STIGVEF TR++ ++ KI+KAQIW
Sbjct: 8 DDYDYLFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRSTIGVEFATRSIQVDDKIVKAQIW 67
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYD+T+ +F++V RW++ELR H D++ I+L+GNK
Sbjct: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANTVIMLVGNK 127
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
+DL +RA+S E+ +FAE + FF E SAL NV+ AF +L +IY VSKK L+ G+
Sbjct: 128 ADLNHLRAISTEEVKDFAERENTFFMETSALEAINVENAFTEVLTQIYRVVSKKALDAGD 187
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
P G I+V G+ ++S +KK C+
Sbjct: 188 DPTTALP--KGQMINV--GSRDDVSAVKKSGCCA 217
>gi|302691568|ref|XP_003035463.1| GTPase [Schizophyllum commune H4-8]
gi|300109159|gb|EFJ00561.1| GTPase [Schizophyllum commune H4-8]
Length = 210
Score = 233 bits (595), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 109/183 (59%), Positives = 143/183 (78%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR+++++GK +KAQIWDTA
Sbjct: 8 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSISVDGKTVKAQIWDTA 67
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQERYRA+TSAYYRGA+GA++VYDI K ++ +V RW++ELR HADS+I I+L+GNKSDL
Sbjct: 68 GQERYRAITSAYYRGAVGALLVYDIAKHATYVNVTRWLKELRDHADSNIVIMLVGNKSDL 127
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNGKV 205
+RAV ++A FA + L F E SAL+ NV++AF +L +IY VS K LE +
Sbjct: 128 KHLRAVPTDEAKSFAAENNLSFIETSALDASNVESAFQTILTDIYRIVSSKSLESSANPI 187
Query: 206 DGP 208
+ P
Sbjct: 188 EPP 190
>gi|350537783|ref|NP_001233798.1| Rab11 GTPase [Solanum lycopersicum]
gi|6688535|emb|CAB65172.1| Rab11 GTPase [Solanum lycopersicum]
Length = 218
Score = 233 bits (595), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 119/214 (55%), Positives = 155/214 (72%), Gaps = 4/214 (1%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FK+V+IGDS VGKS +LSRFTKNEF +SKSTIGVEF T+++ I+GK+IKAQIW
Sbjct: 8 DEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKSLNIDGKVIKAQIW 67
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+T AYYRGA+GA++VYD+T+ +F++V RW++ELR H D +I ++L+GNK
Sbjct: 68 DTAGQERYRAITIAYYRGAVGALLVYDVTRHVTFENVNRWLKELRDHTDPNIVVMLLGNK 127
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
SDL + AVS E+A AE + L+F E SAL NV+ AF L +IY VSKK +E G+
Sbjct: 128 SDLRHLVAVSTEEAKSLAEREALYFMETSALEATNVENAFTEALTQIYRIVSKKAVEAGD 187
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
+G A K I+ D E S KK CS
Sbjct: 188 ---EGATSTAPPKGQTINIKD-EGSAWKKFGCCS 217
>gi|7108528|gb|AAF36458.1|AF127669_1 small GTPase [Mus musculus]
Length = 216
Score = 233 bits (595), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 111/176 (63%), Positives = 142/176 (80%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIW
Sbjct: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI K ++++V RW++ELR HADS+I I+L+GNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNK 125
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL 198
SDL +RAV ++A FAE GL F E SAL+ NV+ AF +L EIY VS+K +
Sbjct: 126 SDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKHM 181
>gi|238007236|gb|ACR34653.1| unknown [Zea mays]
Length = 217
Score = 233 bits (595), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 109/170 (64%), Positives = 139/170 (81%)
Query: 27 YVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTAG 86
Y+FK+V+IGDS VGKS ILSRFT+N F DSKSTIGVEF T+++ I+GK IKAQIWDTAG
Sbjct: 11 YLFKMVLIGDSGVGKSNILSRFTRNHFSLDSKSTIGVEFATKSLQIDGKTIKAQIWDTAG 70
Query: 87 QERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDLV 146
QERYRA+TSAYYRGA+ A++VYDITKRQSFD+V RW+ ELR HADSSI I+++GNKSDL+
Sbjct: 71 QERYRAITSAYYRGAVAALLVYDITKRQSFDNVHRWLRELRDHADSSIVIMMVGNKSDLI 130
Query: 147 DMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKK 196
+RA+S ++ AE +GLFF E A+ NV+ AF ++ E+YG V++K
Sbjct: 131 HLRAISEDEGKALAEKEGLFFLETLAMEAINVEEAFQTIITEVYGIVNRK 180
>gi|357124167|ref|XP_003563776.1| PREDICTED: ras-related protein RIC2-like [Brachypodium distachyon]
Length = 217
Score = 233 bits (595), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 114/214 (53%), Positives = 155/214 (72%), Gaps = 6/214 (2%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK++KAQIW
Sbjct: 9 DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKVVKAQIW 68
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYD+T+ +F++ RW++ELR H D +I ++L+GNK
Sbjct: 69 DTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENAERWLKELRDHTDPNIVVMLVGNK 128
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
SDL + AV ++ FAE + L+F E SAL NV+ AF +L +IY VSK+ +E G
Sbjct: 129 SDLRHLVAVQTDEGKAFAERESLYFMETSALESTNVEDAFAEVLTQIYRIVSKRAVEAGE 188
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
GP G KI++ ++S +KK CS
Sbjct: 189 DSASGPG--KGEKINMKD----DVSAVKKGGCCS 216
>gi|54695940|gb|AAV38342.1| RAB11B, member RAS oncogene family [Homo sapiens]
Length = 218
Score = 233 bits (595), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 118/203 (58%), Positives = 149/203 (73%), Gaps = 10/203 (4%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIW
Sbjct: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI K ++++V RW++ELR HADS I I+L+GNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSDIVIMLVGNK 125
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL---- 198
SDL +RAV ++A FAE L F E SAL+ NV+ AF +L EIY VS+K++
Sbjct: 126 SDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADRA 185
Query: 199 ----ECGNGKVD--GPPMLAGSK 215
GN VD PP G K
Sbjct: 186 AHDESPGNNVVDISVPPTTDGQK 208
>gi|349603694|gb|AEP99464.1| Ras-like protein Rab-11B-like protein [Equus caballus]
Length = 275
Score = 233 bits (595), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 111/176 (63%), Positives = 143/176 (81%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIW
Sbjct: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI K ++++V RW++ELR HADS+I I+L+GNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNK 125
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL 198
SDL +RAV ++A FAE GL F E SAL+ NV+ AF +L EIY VS+K++
Sbjct: 126 SDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQM 181
>gi|307210968|gb|EFN87269.1| Ras-related protein Rab-11B [Harpegnathos saltator]
Length = 215
Score = 233 bits (594), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 111/176 (63%), Positives = 142/176 (80%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIW
Sbjct: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI K ++++V RW+ ELR HAD +I I+L+GNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNK 125
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL 198
SDL +RAV ++A FAE GL F E SAL+ NV+TAF +L EIY VS+K++
Sbjct: 126 SDLRHLRAVPTDEAKAFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQI 181
>gi|195452940|ref|XP_002073567.1| GK14185 [Drosophila willistoni]
gi|194169652|gb|EDW84553.1| GK14185 [Drosophila willistoni]
Length = 214
Score = 233 bits (594), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 119/213 (55%), Positives = 156/213 (73%), Gaps = 12/213 (5%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIW
Sbjct: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI K ++++V RW+ ELR HAD +I I+L+GNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNK 125
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
SDL +RAV ++A FAE GL F E SAL+ NV+TAF +L EIY VS+K++
Sbjct: 126 SDLRHLRAVPTDEAKLFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQIR--- 182
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLSTC 235
PP + DVI +++E ++K T
Sbjct: 183 ----DPP-----EGDVIRPSNVEPIDVKPTVTA 206
>gi|193645765|ref|XP_001950094.1| PREDICTED: ras-related protein Rab-11A-like isoform 1
[Acyrthosiphon pisum]
Length = 217
Score = 233 bits (594), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 110/176 (62%), Positives = 142/176 (80%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
++ DY+FKVV+IGDS VGKS +L+RFT+NEF +SKSTIGVEF TR++ +N KIIKAQIW
Sbjct: 6 EEYDYLFKVVLIGDSGVGKSNLLARFTRNEFNLESKSTIGVEFATRSIKVNKKIIKAQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI K+ ++ +V RW+ ELR HAD +I I+L+GNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKQLTYQNVERWLSELRDHADQNIVIMLVGNK 125
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL 198
SDL +RAV A++A FAE L F E SAL+ NV+TAF +L EIY VS+K++
Sbjct: 126 SDLRHLRAVPADEATAFAEANNLSFIETSALDSTNVETAFENILTEIYNIVSQKQM 181
>gi|307185019|gb|EFN71248.1| Ras-related protein Rab-11A [Camponotus floridanus]
Length = 215
Score = 233 bits (594), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 111/176 (63%), Positives = 142/176 (80%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIW
Sbjct: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI K ++++V RW+ ELR HAD +I I+L+GNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNK 125
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL 198
SDL +RAV ++A FAE GL F E SAL+ NV+TAF +L EIY VS+K++
Sbjct: 126 SDLRHLRAVPTDEAKAFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQI 181
>gi|340729738|ref|XP_003403153.1| PREDICTED: ras-related protein Rab-11A-like [Bombus terrestris]
gi|350411417|ref|XP_003489343.1| PREDICTED: ras-related protein Rab-11A-like [Bombus impatiens]
Length = 215
Score = 233 bits (594), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 111/176 (63%), Positives = 142/176 (80%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIW
Sbjct: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI K ++++V RW+ ELR HAD +I I+L+GNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNK 125
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL 198
SDL +RAV ++A FAE GL F E SAL+ NV+TAF +L EIY VS+K++
Sbjct: 126 SDLRHLRAVPTDEAKAFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQI 181
>gi|213408535|ref|XP_002175038.1| GTPase Ypt3 [Schizosaccharomyces japonicus yFS275]
gi|212003085|gb|EEB08745.1| GTPase Ypt3 [Schizosaccharomyces japonicus yFS275]
Length = 214
Score = 233 bits (594), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 113/196 (57%), Positives = 150/196 (76%), Gaps = 3/196 (1%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FK V+IGDS VGKS +L RFT+NEF +SKSTIGVEF TR + ++ K IKAQIW
Sbjct: 5 DEYDYLFKTVLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKIKAQIW 64
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDITK+ SFD+V RW++ELR HADS+I I+L+GNK
Sbjct: 65 DTAGQERYRAITSAYYRGAVGALIVYDITKQSSFDNVGRWLKELRDHADSNIVIMLVGNK 124
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
+DL+ +RAVS E+A FA + L F E SA++ NV+ AF +L EI+ VS + +E G+
Sbjct: 125 TDLLHLRAVSTEEAQAFAAENNLSFIETSAMDASNVEEAFQTVLTEIFRIVSNRAMEGGD 184
Query: 203 GKVDGPPMLAGSKIDV 218
+G AG +++
Sbjct: 185 ---EGAHPSAGQTLNI 197
>gi|131849|sp|P22129.1|RB11B_DISOM RecName: Full=Ras-related protein Rab-11B; AltName: Full=ORA3;
Flags: Precursor
gi|213121|gb|AAA49233.1| GTP-binding protein [Discopyge ommata]
Length = 218
Score = 233 bits (594), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 117/203 (57%), Positives = 150/203 (73%), Gaps = 10/203 (4%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIW
Sbjct: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI K ++++V RW++ELR HAD++I I+L+GNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNK 125
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL---- 198
SDL +RAV ++A FAE L F E SAL+ NV+ AF +L EIY VS+K++
Sbjct: 126 SDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQISDRS 185
Query: 199 ----ECGNGKVD--GPPMLAGSK 215
GN VD PP G K
Sbjct: 186 AHDESPGNNVVDISVPPTTDGQK 208
>gi|348551270|ref|XP_003461453.1| PREDICTED: ras-related protein Rab-11B-like [Cavia porcellus]
Length = 278
Score = 233 bits (594), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 118/203 (58%), Positives = 150/203 (73%), Gaps = 10/203 (4%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIW
Sbjct: 66 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIW 125
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI K ++++V RW++ELR HADS+I I+L+GNK
Sbjct: 126 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNK 185
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL---- 198
SDL +RAV ++A FAE L F E SAL+ NV+ AF +L EIY VS+K++
Sbjct: 186 SDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADRA 245
Query: 199 ----ECGNGKVD--GPPMLAGSK 215
GN VD PP G K
Sbjct: 246 AHDESPGNNVVDISVPPTTDGQK 268
>gi|60302752|ref|NP_001012569.1| ras-related protein Rab-11B [Gallus gallus]
gi|224087229|ref|XP_002190133.1| PREDICTED: ras-related protein Rab-11B [Taeniopygia guttata]
gi|60098771|emb|CAH65216.1| hypothetical protein RCJMB04_8i9 [Gallus gallus]
Length = 218
Score = 233 bits (594), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 117/203 (57%), Positives = 150/203 (73%), Gaps = 10/203 (4%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIW
Sbjct: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI K ++++V RW++ELR HAD++I I+L+GNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNK 125
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL---- 198
SDL +RAV ++A FAE L F E SAL+ NV+ AF +L EIY VS+K++
Sbjct: 126 SDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADRS 185
Query: 199 ----ECGNGKVD--GPPMLAGSK 215
GN VD PP G K
Sbjct: 186 AHDESPGNNVVDISVPPTTDGQK 208
>gi|219990677|gb|ACL68712.1| FI09227p [Drosophila melanogaster]
Length = 214
Score = 233 bits (594), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 118/213 (55%), Positives = 156/213 (73%), Gaps = 12/213 (5%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIW
Sbjct: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI K ++++V RW+ ELR HAD +I I+L+GNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRGHADQNIVIMLVGNK 125
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
SDL +R+V ++A FAE GL F E SAL+ NV+TAF +L EIY VS+K++
Sbjct: 126 SDLRHLRSVPTDEAKLFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQIR--- 182
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLSTC 235
PP + DVI +++E ++K T
Sbjct: 183 ----DPP-----EGDVIRPSNVEPIDVKPTVTA 206
>gi|84000297|ref|NP_001033251.1| ras-related protein Rab-11A [Bos taurus]
gi|116255983|sp|Q2TA29.3|RB11A_BOVIN RecName: Full=Ras-related protein Rab-11A; Flags: Precursor
gi|83405346|gb|AAI11144.1| RAB11A, member RAS oncogene family [Bos taurus]
Length = 216
Score = 233 bits (594), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 111/176 (63%), Positives = 143/176 (81%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIW
Sbjct: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI K ++++V RW++ELR HADS+I I+L+GNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNK 125
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL 198
SDL +RAV ++A FAE GL F E SAL+ NV+ AF +L EIY VS+K++
Sbjct: 126 SDLRHLRAVPTDEARAFAEKNGLSFIETSALDYTNVEAAFQTILTEIYRIVSQKQM 181
>gi|388493146|gb|AFK34639.1| unknown [Medicago truncatula]
Length = 218
Score = 233 bits (593), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 117/214 (54%), Positives = 155/214 (72%), Gaps = 4/214 (1%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FK+V+IGDS VGKS +LSRFT+NEF +SKSTIGVEF T+++T++ K+IKAQIW
Sbjct: 8 DEYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLTVDAKVIKAQIW 67
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYD+T+R +F++ ARW++ELR H D +I ++LIGNK
Sbjct: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNIVVMLIGNK 127
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
SDL + AV ED FAE + L+F E SAL NV+ AF +L +IY VSKK +E G
Sbjct: 128 SDLRHLVAVPTEDGKSFAERESLYFMETSALEATNVENAFTEVLSQIYRIVSKKAVEAGE 187
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
G G I+V + S +K+ CS
Sbjct: 188 GGSSSSVPSVGQTINVKE----DFSVLKRFGCCS 217
>gi|357452859|ref|XP_003596706.1| Ras-related protein Rab-11A [Medicago truncatula]
gi|355485754|gb|AES66957.1| Ras-related protein Rab-11A [Medicago truncatula]
Length = 218
Score = 233 bits (593), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 108/178 (60%), Positives = 142/178 (79%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FK+V+IGDS VGKS +LSRFT+NEF +SKSTIGVEF T+++T++ K+IKAQIW
Sbjct: 8 DEYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLTVDAKVIKAQIW 67
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYD+T+R +F++ ARW++ELR H D +I ++LIGNK
Sbjct: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNIVVMLIGNK 127
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELEC 200
SDL + AV ED FAE + L+F E SAL NV+ AF +L +IY VSKK +E
Sbjct: 128 SDLRHLVAVPTEDGKSFAERESLYFMETSALEATNVENAFTEVLSQIYRIVSKKAVEA 185
>gi|6679583|ref|NP_033023.1| ras-related protein Rab-11B [Mus musculus]
gi|1172815|sp|P46638.3|RB11B_MOUSE RecName: Full=Ras-related protein Rab-11B; Flags: Precursor
gi|433064|gb|AAC42093.1| Rab11b [Mus musculus]
gi|27502091|gb|AAO17377.1| RAB11B protein [Mus musculus]
gi|32493335|gb|AAH54753.1| RAB11B, member RAS oncogene family [Mus musculus]
gi|55391484|gb|AAH85270.1| RAB11B, member RAS oncogene family [Mus musculus]
gi|74138737|dbj|BAE27183.1| unnamed protein product [Mus musculus]
gi|74138750|dbj|BAE27188.1| unnamed protein product [Mus musculus]
gi|74144654|dbj|BAE27312.1| unnamed protein product [Mus musculus]
gi|74147424|dbj|BAE27582.1| unnamed protein product [Mus musculus]
gi|74151060|dbj|BAE27658.1| unnamed protein product [Mus musculus]
gi|74195098|dbj|BAE28293.1| unnamed protein product [Mus musculus]
gi|74195236|dbj|BAE28347.1| unnamed protein product [Mus musculus]
gi|112292981|dbj|BAF02868.1| Rab11B [Mus musculus]
gi|148678259|gb|EDL10206.1| mCG22989, isoform CRA_b [Mus musculus]
gi|187957168|gb|AAI57917.1| RAB11B, member RAS oncogene family [Mus musculus]
Length = 218
Score = 233 bits (593), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 117/203 (57%), Positives = 150/203 (73%), Gaps = 10/203 (4%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIW
Sbjct: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI K ++++V RW++ELR HADS+I I+L+GNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNK 125
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL---- 198
SDL +RAV ++A FAE L F E SAL+ NV+ AF +L EIY VS+K++
Sbjct: 126 SDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADRA 185
Query: 199 ----ECGNGKVD--GPPMLAGSK 215
GN VD PP G +
Sbjct: 186 AHDESPGNNVVDISVPPTTDGQR 208
>gi|367054586|ref|XP_003657671.1| hypothetical protein THITE_2123570 [Thielavia terrestris NRRL 8126]
gi|347004937|gb|AEO71335.1| hypothetical protein THITE_2123570 [Thielavia terrestris NRRL 8126]
Length = 213
Score = 233 bits (593), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 122/219 (55%), Positives = 153/219 (69%), Gaps = 8/219 (3%)
Query: 20 MIPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKA 79
M D+ D++FKVV+IGDS VGKS +LSRFT+NEF DSKSTIGVEF TR++ I+ K IKA
Sbjct: 1 MANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQIDNKTIKA 60
Query: 80 QIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILI 139
QIWDTAGQERYRA+TSAYYRGA+GA++VYDI+K SF++V RW++ELR HADS+I I+L+
Sbjct: 61 QIWDTAGQERYRAITSAYYRGAVGALLVYDISKSLSFENVTRWLKELRDHADSNIVIMLV 120
Query: 140 GNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELE 199
GNK+D +RAV ED FA + GL F E SAL NVD AF +L IY VS K L
Sbjct: 121 GNKTDQRHLRAVPTEDGKNFASENGLSFIETSALEATNVDLAFQNILTSIYQIVSSKSLA 180
Query: 200 CGNGKVDGPPMLAGSKIDVISGADLEIS-EMKKLSTCSC 237
V G K D G ++ +S E +K + +C
Sbjct: 181 EEGADV-------GKKFDPREGNNITLSQEGRKEESKTC 212
>gi|58332330|ref|NP_001011048.1| RAB11B, member RAS oncogene family, gene 1 [Xenopus (Silurana)
tropicalis]
gi|148237448|ref|NP_001087959.1| uncharacterized protein LOC494642 [Xenopus laevis]
gi|52078458|gb|AAH82421.1| LOC494642 protein [Xenopus laevis]
gi|54037941|gb|AAH84173.1| RAB11B, member RAS oncogene family, gene 1 [Xenopus (Silurana)
tropicalis]
gi|89267988|emb|CAJ81987.1| RAB11B, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|89271367|emb|CAJ83815.1| RAB11B, member RAS oncogene family [Xenopus (Silurana) tropicalis]
Length = 218
Score = 233 bits (593), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 117/203 (57%), Positives = 150/203 (73%), Gaps = 10/203 (4%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIW
Sbjct: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI K ++++V RW++ELR HAD++I I+L+GNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNK 125
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL---- 198
SDL +RAV ++A FAE L F E SAL+ NV+ AF +L EIY VS+K++
Sbjct: 126 SDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADRS 185
Query: 199 ----ECGNGKVD--GPPMLAGSK 215
GN VD PP G K
Sbjct: 186 AHDESPGNNVVDISVPPTTDGQK 208
>gi|395841772|ref|XP_003793707.1| PREDICTED: ras-related protein Rab-11B [Otolemur garnettii]
Length = 249
Score = 233 bits (593), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 118/203 (58%), Positives = 150/203 (73%), Gaps = 10/203 (4%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIW
Sbjct: 37 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIW 96
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI K ++++V RW++ELR HADS+I I+L+GNK
Sbjct: 97 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNK 156
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL---- 198
SDL +RAV ++A FAE L F E SAL+ NV+ AF +L EIY VS+K++
Sbjct: 157 SDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADRA 216
Query: 199 ----ECGNGKVD--GPPMLAGSK 215
GN VD PP G K
Sbjct: 217 AHDESPGNNVVDISVPPTTDGQK 239
>gi|302756057|ref|XP_002961452.1| rab family GTPase [Selaginella moellendorffii]
gi|300170111|gb|EFJ36712.1| rab family GTPase [Selaginella moellendorffii]
Length = 218
Score = 233 bits (593), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 115/215 (53%), Positives = 160/215 (74%), Gaps = 3/215 (1%)
Query: 22 PDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQI 81
D DY+FK+V+IGDSAVGKS +LSR+++NEF +S++TIGVEFQT+++ I GK +KAQI
Sbjct: 6 SDGDDYLFKIVLIGDSAVGKSNLLSRYSRNEFHLNSRATIGVEFQTQSMVIEGKEVKAQI 65
Query: 82 WDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGN 141
WDTAGQER+RAVTSAYYRGA+GA++VYDI+++Q+F++V RW+EELR ++D S+ +L+GN
Sbjct: 66 WDTAGQERFRAVTSAYYRGAVGAMIVYDISQKQTFENVERWLEELRVYSDFSLVTMLVGN 125
Query: 142 KSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECG 201
KSDL +R VS E+A + AE +GLFF E SAL+ NV AF +++EI+G VSKK L
Sbjct: 126 KSDLESLRQVSIEEATDLAEREGLFFIETSALDSTNVAAAFETVIKEIFGMVSKKILSSD 185
Query: 202 NGKVDGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
+ K L+G+K + + + LS CS
Sbjct: 186 SSK---ARTLSGTKKLGLENGNSSKPQDSGLSCCS 217
>gi|255644368|gb|ACU22689.1| unknown [Glycine max]
Length = 193
Score = 233 bits (593), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 109/177 (61%), Positives = 141/177 (79%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D DY+FKVV+IGDS VGKS +LSRFTKNEF +SKSTIGVEF TRT+ ++ K+IKAQIW
Sbjct: 8 DDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSKVIKAQIW 67
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYD+T+ +F++V RW++ELR H D++I ++L+GNK
Sbjct: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELRNHTDANIVVMLVGNK 127
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELE 199
SDL + AVS ED +AE + L+F E SAL NV+ AF +L +IY VSKK +E
Sbjct: 128 SDLRHLVAVSTEDGKSYAEKESLYFMETSALEATNVENAFAEVLTQIYHIVSKKAVE 184
>gi|449438115|ref|XP_004136835.1| PREDICTED: ras-related protein Rab11D-like [Cucumis sativus]
gi|449530235|ref|XP_004172101.1| PREDICTED: ras-related protein Rab11D-like [Cucumis sativus]
Length = 219
Score = 233 bits (593), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 114/215 (53%), Positives = 157/215 (73%), Gaps = 5/215 (2%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FK+V+IGDS VGKS +LSRFT+N+F +SKSTIGVEF T+++ I+GK+IKAQIW
Sbjct: 8 DEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGKVIKAQIW 67
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYD+T+R +F++ ARW++ELR H D ++ ++LIGNK
Sbjct: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRRPTFENAARWLKELRDHTDPNMVVMLIGNK 127
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
DL + V ED FAE + L+F E SAL+ NV++AF +L +IY VSK+ +E G+
Sbjct: 128 CDLRHLILVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVSKRSVEAGD 187
Query: 203 -GKVDGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
G G IDV + S +K++ CS
Sbjct: 188 IGSASTTLPSKGQTIDVKDDS----SVLKRIGCCS 218
>gi|347972127|ref|XP_001238828.3| AGAP004559-PA [Anopheles gambiae str. PEST]
gi|347972129|ref|XP_001238827.3| AGAP004559-PB [Anopheles gambiae str. PEST]
gi|347972131|ref|XP_001238825.3| AGAP004559-PC [Anopheles gambiae str. PEST]
gi|347972133|ref|XP_313857.3| AGAP004559-PD [Anopheles gambiae str. PEST]
gi|347972135|ref|XP_003436840.1| AGAP004559-PE [Anopheles gambiae str. PEST]
gi|347972137|ref|XP_003436841.1| AGAP004559-PF [Anopheles gambiae str. PEST]
gi|347972139|ref|XP_003436842.1| AGAP004559-PG [Anopheles gambiae str. PEST]
gi|347972141|ref|XP_003436843.1| AGAP004559-PH [Anopheles gambiae str. PEST]
gi|347972143|ref|XP_003436844.1| AGAP004559-PI [Anopheles gambiae str. PEST]
gi|347972145|ref|XP_003436845.1| AGAP004559-PJ [Anopheles gambiae str. PEST]
gi|347972147|ref|XP_003436846.1| AGAP004559-PK [Anopheles gambiae str. PEST]
gi|333469183|gb|EAU76889.3| AGAP004559-PA [Anopheles gambiae str. PEST]
gi|333469184|gb|EAU76888.3| AGAP004559-PB [Anopheles gambiae str. PEST]
gi|333469185|gb|EAU76886.3| AGAP004559-PC [Anopheles gambiae str. PEST]
gi|333469186|gb|EAA44610.3| AGAP004559-PD [Anopheles gambiae str. PEST]
gi|333469187|gb|EGK97198.1| AGAP004559-PE [Anopheles gambiae str. PEST]
gi|333469188|gb|EGK97199.1| AGAP004559-PF [Anopheles gambiae str. PEST]
gi|333469189|gb|EGK97200.1| AGAP004559-PG [Anopheles gambiae str. PEST]
gi|333469190|gb|EGK97201.1| AGAP004559-PH [Anopheles gambiae str. PEST]
gi|333469191|gb|EGK97202.1| AGAP004559-PI [Anopheles gambiae str. PEST]
gi|333469192|gb|EGK97203.1| AGAP004559-PJ [Anopheles gambiae str. PEST]
gi|333469193|gb|EGK97204.1| AGAP004559-PK [Anopheles gambiae str. PEST]
Length = 215
Score = 233 bits (593), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 111/176 (63%), Positives = 142/176 (80%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIW
Sbjct: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI K ++++V RW+ ELR HAD +I I+L+GNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNK 125
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL 198
SDL +RAV ++A FAE GL F E SAL+ NV+TAF +L EIY VS+K++
Sbjct: 126 SDLRHLRAVPTDEAKGFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQI 181
>gi|336367947|gb|EGN96291.1| hypothetical protein SERLA73DRAFT_185967 [Serpula lacrymans var.
lacrymans S7.3]
gi|336380674|gb|EGO21827.1| hypothetical protein SERLADRAFT_474770 [Serpula lacrymans var.
lacrymans S7.9]
Length = 210
Score = 233 bits (593), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 111/183 (60%), Positives = 140/183 (76%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
D++FKVV+IGDS VGKS +LSRFT+NEF DSKSTIGVEF TR++ ++GK +KAQIWDTA
Sbjct: 8 DFLFKVVLIGDSGVGKSNLLSRFTRNEFHVDSKSTIGVEFATRSINVDGKTVKAQIWDTA 67
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQERYRA+TSAYYRGA+GA++VYDI K ++D V RW++ELR HADS+I I+L+GNKSDL
Sbjct: 68 GQERYRAITSAYYRGAVGALLVYDIAKHATYDSVTRWLKELRDHADSNIVIMLVGNKSDL 127
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNGKV 205
+RAV E+A F+ + L F E SAL+ NVD+AF +L IY VS K LE +
Sbjct: 128 KHLRAVPTEEAKAFSTENELSFIETSALDASNVDSAFQTILTGIYRIVSSKSLEQSADPI 187
Query: 206 DGP 208
P
Sbjct: 188 RAP 190
>gi|302776382|ref|XP_002971361.1| rab family GTPase [Selaginella moellendorffii]
gi|300161343|gb|EFJ27959.1| rab family GTPase [Selaginella moellendorffii]
Length = 218
Score = 233 bits (593), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 115/215 (53%), Positives = 160/215 (74%), Gaps = 3/215 (1%)
Query: 22 PDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQI 81
D DY+FK+V+IGDSAVGKS +LSR+++NEF +S++TIGVEFQT+++ I GK +KAQI
Sbjct: 6 SDGDDYLFKIVLIGDSAVGKSNLLSRYSRNEFHLNSRATIGVEFQTQSMVIEGKEVKAQI 65
Query: 82 WDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGN 141
WDTAGQER+RAVTSAYYRGA+GA++VYDI+++Q+F++V RW+EELR ++D S+ +L+GN
Sbjct: 66 WDTAGQERFRAVTSAYYRGAVGAMIVYDISQKQTFENVERWLEELRVYSDFSLVTMLVGN 125
Query: 142 KSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECG 201
KSDL +R VS E+A + AE +GLFF E SAL+ NV AF +++EI+G VSKK L
Sbjct: 126 KSDLESLRQVSIEEATDLAEREGLFFIETSALDSTNVAAAFETVIKEIFGMVSKKILSSD 185
Query: 202 NGKVDGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
+ K L+G+K + + + LS CS
Sbjct: 186 SSK---AGTLSGTKKLGLENGNSSKPQDSGLSCCS 217
>gi|170035713|ref|XP_001845712.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167878018|gb|EDS41401.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 215
Score = 233 bits (593), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 111/176 (63%), Positives = 142/176 (80%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIW
Sbjct: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI K ++++V RW+ ELR HAD +I I+L+GNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNK 125
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL 198
SDL +RAV ++A FAE GL F E SAL+ NV+TAF +L EIY VS+K++
Sbjct: 126 SDLRHLRAVPTDEAKGFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQI 181
>gi|49168476|emb|CAG38733.1| RAB11B [Homo sapiens]
Length = 218
Score = 233 bits (593), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 117/203 (57%), Positives = 150/203 (73%), Gaps = 10/203 (4%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIW
Sbjct: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI K ++++V RW++ELR HADS+I I+L+GNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNK 125
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL---- 198
SDL +RAV ++A FAE L F E +AL+ NV+ AF +L EIY VS+K++
Sbjct: 126 SDLRHLRAVPTDEARAFAEKNNLSFIETAALDSTNVEEAFKNILTEIYRIVSQKQIADRA 185
Query: 199 ----ECGNGKVD--GPPMLAGSK 215
GN VD PP G K
Sbjct: 186 AHDESPGNNVVDISVPPTTDGQK 208
>gi|224005202|ref|XP_002296252.1| rab-type small GTPase [Thalassiosira pseudonana CCMP1335]
gi|209586284|gb|ACI64969.1| rab-type small GTPase [Thalassiosira pseudonana CCMP1335]
Length = 215
Score = 233 bits (593), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 109/196 (55%), Positives = 151/196 (77%), Gaps = 1/196 (0%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
++ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF T+++ GK IKAQIW
Sbjct: 7 EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIQTEGKTIKAQIW 66
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI+K +F++V RW++ELR HA+++I ++L+GNK
Sbjct: 67 DTAGQERYRAITSAYYRGAVGALLVYDISKHGTFENVERWLKELRDHAEANIVVMLVGNK 126
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
SDL +RAV ++A+ F+E L F E SAL+ VDTAF R+L EIY +S++ + +
Sbjct: 127 SDLRHLRAVETDEAMAFSEQHNLAFIETSALDASGVDTAFQRILTEIYRLMSRRNMAAED 186
Query: 203 GKVDGPPMLAGSKIDV 218
G + P + +G I +
Sbjct: 187 G-ANAPQLSSGQTISL 201
>gi|388515945|gb|AFK46034.1| unknown [Lotus japonicus]
Length = 227
Score = 233 bits (593), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 117/214 (54%), Positives = 158/214 (73%), Gaps = 5/214 (2%)
Query: 25 IDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDT 84
IDY+FKVV++GDS VGKSQ+L+RF +NEF SK+TIGVEF T+TV ++ K++KAQIWDT
Sbjct: 12 IDYMFKVVMVGDSGVGKSQLLNRFVRNEFQMKSKATIGVEFLTKTVVMDHKVVKAQIWDT 71
Query: 85 AGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSD 144
AGQERY+A+T+AYYRGA GA++ YDIT RQSFDHV +W++ELR HAD+ I ++L+GNKSD
Sbjct: 72 AGQERYQAITTAYYRGATGALLAYDITNRQSFDHVEKWLDELRVHADNII-VMLVGNKSD 130
Query: 145 LVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNGK 204
L RAV E+A +FA+ +GLFF E SAL+ +NV++AF LL +IY V KK + +
Sbjct: 131 LSSGRAVPMEEAKDFAKQKGLFFVETSALDSNNVESAFLGLLSQIYATVGKKHIIAEGAE 190
Query: 205 VDGPPM---LAGSKIDVISGADLEISEMKKLSTC 235
++ + L G KI V S + E + K+ C
Sbjct: 191 LNWDKVNLELEGIKIKV-SSQEAECQKAKRRFDC 223
>gi|402084201|gb|EJT79219.1| Ras-like protein Rab-11A [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 211
Score = 233 bits (593), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 111/185 (60%), Positives = 145/185 (78%)
Query: 20 MIPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKA 79
M D+ D++FKVV+IGDS VGKS +LSRFT+NEF DSKSTIGVEF TR++ ++ K IKA
Sbjct: 1 MANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKA 60
Query: 80 QIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILI 139
QIWDTAGQERYRA+TSAYYRGA+GA++VYDI+K Q++++V RW++ELR HAD++I I+L+
Sbjct: 61 QIWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVIRWLKELRDHADANIVIMLV 120
Query: 140 GNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELE 199
GNKSDL +RAV E+A FA + L F E SA + NV+ AF +L EIY VS K L+
Sbjct: 121 GNKSDLRHLRAVPTEEAKAFASENHLSFIETSAFDASNVELAFQNILTEIYRIVSSKALD 180
Query: 200 CGNGK 204
G+ +
Sbjct: 181 SGDAQ 185
>gi|320167252|gb|EFW44151.1| tubulovesicle-associated protein [Capsaspora owczarzaki ATCC 30864]
Length = 216
Score = 233 bits (593), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 118/213 (55%), Positives = 155/213 (72%), Gaps = 4/213 (1%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIW
Sbjct: 7 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIW 66
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI K ++++V RW++ELR HAD++I I+L+GNK
Sbjct: 67 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADANIVIMLVGNK 126
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
SDL +RAV +D+ FAE L F E SAL+ NV+ AF +L EIY VS+K + +
Sbjct: 127 SDLRHLRAVPTDDSKSFAEKNNLSFIETSALDATNVELAFQNILTEIYHIVSQKTI-VND 185
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLSTC 235
V P S + I+ A E ++ KK C
Sbjct: 186 DHVAKVPT---SNVQTITVAPSEATDDKKKGGC 215
>gi|157122009|ref|XP_001659918.1| rab11 [Aedes aegypti]
gi|94469128|gb|ABF18413.1| RAB family GTPase [Aedes aegypti]
gi|108874607|gb|EAT38832.1| AAEL009317-PA [Aedes aegypti]
Length = 215
Score = 233 bits (593), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 111/176 (63%), Positives = 142/176 (80%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIW
Sbjct: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI K ++++V RW+ ELR HAD +I I+L+GNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNK 125
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL 198
SDL +RAV ++A FAE GL F E SAL+ NV+TAF +L EIY VS+K++
Sbjct: 126 SDLRHLRAVPTDEAKGFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQI 181
>gi|432855565|ref|XP_004068250.1| PREDICTED: ras-related protein Rab-11B-like [Oryzias latipes]
Length = 218
Score = 232 bits (592), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 116/203 (57%), Positives = 151/203 (74%), Gaps = 10/203 (4%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIW
Sbjct: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI K ++++V RW++ELR HADS+I I+L+GNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNK 125
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL---- 198
SDL +RAV ++A FAE L F E SAL+ NV+ AF +L EIY VS++++
Sbjct: 126 SDLRHLRAVPTDEARAFAEKNTLSFIETSALDSTNVEEAFKNILTEIYRIVSQRQIADRS 185
Query: 199 ----ECGNGKVD--GPPMLAGSK 215
GN VD PP + G +
Sbjct: 186 AHDDSPGNNVVDISVPPTMDGQR 208
>gi|390598604|gb|EIN08002.1| ras-domain-containing protein [Punctularia strigosozonata HHB-11173
SS5]
Length = 213
Score = 232 bits (592), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 110/183 (60%), Positives = 142/183 (77%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK +KAQIWDTA
Sbjct: 8 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTVKAQIWDTA 67
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQERYRA+TSAYYRGA+GA++VYDI K ++ +V RW++ELR HADS+I I+L+GNKSDL
Sbjct: 68 GQERYRAITSAYYRGAVGALLVYDIAKHATYVNVTRWLKELRDHADSNIVIMLVGNKSDL 127
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNGKV 205
+RAV E+A F+ + GL F E SAL+ NV++AF +L +IY VS K LE +
Sbjct: 128 KHLRAVPTEEAKTFSTENGLSFIETSALDASNVESAFQTILTDIYRIVSSKSLEQSADPI 187
Query: 206 DGP 208
P
Sbjct: 188 KPP 190
>gi|560504|emb|CAA82710.1| guanine nucleotide regulatory protein [Vicia faba]
gi|1098296|prf||2115367D small GTP-binding protein
Length = 223
Score = 232 bits (592), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 113/211 (53%), Positives = 149/211 (70%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
DY+FK+V+IGDSAVGKS +L+RF ++EF+ +SKSTIGVEFQT+ + INGK +KAQIWDTA
Sbjct: 12 DYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMEINGKEVKAQIWDTA 71
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQER+RAVTSAYYRGA+GA++VYDI++RQ+FD + RW+ EL H+D ++ IL+GNKSDL
Sbjct: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNGKV 205
D R V + AE QGLFF E SAL+ NV +AF +++EIY +S+K + K
Sbjct: 132 KDAREVPTPEGKALAEAQGLFFMETSALDSSNVVSAFQTVVKEIYNILSRKVMMSQELKK 191
Query: 206 DGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
P K V+ D E+ K CS
Sbjct: 192 QDTPWTENGKTVVLQEGDREVEVESKKGCCS 222
>gi|224086488|ref|XP_002307897.1| predicted protein [Populus trichocarpa]
gi|222853873|gb|EEE91420.1| predicted protein [Populus trichocarpa]
Length = 225
Score = 232 bits (592), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 112/196 (57%), Positives = 144/196 (73%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
DY+FK+V+IGDSAVGKS +L+RF +NEF+ SKSTIGVEFQT+ + INGK IKAQIWDTA
Sbjct: 12 DYLFKIVLIGDSAVGKSNLLARFARNEFYPSSKSTIGVEFQTQKMDINGKEIKAQIWDTA 71
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQER+RAVTSAYYRGA+GA++VYDI++RQ+FD + +W+ EL H+D ++ IL+GNKSDL
Sbjct: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGKWLNELHTHSDMNVVTILVGNKSDL 131
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNGKV 205
D R VS + AE QGLFF E SAL+ NV AF +++EIY +S+K +
Sbjct: 132 KDAREVSTAEGKALAEAQGLFFMETSALDSSNVAAAFQTVVKEIYNILSRKVMMSQELNK 191
Query: 206 DGPPMLAGSKIDVISG 221
G P L K V+ G
Sbjct: 192 PGAPELGNGKTVVLKG 207
>gi|321469541|gb|EFX80521.1| hypothetical protein DAPPUDRAFT_304112 [Daphnia pulex]
Length = 215
Score = 232 bits (591), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 112/191 (58%), Positives = 147/191 (76%), Gaps = 1/191 (0%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIW
Sbjct: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI K ++++V RW++ELR HAD +I I+L+GNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADQNIVIMLVGNK 125
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
SDL +R+V ++A FAE L F E SAL+ NV+TAF +L EIY VS++ + +
Sbjct: 126 SDLRHLRSVPTDEARAFAERHSLSFIETSALDCTNVETAFHNILTEIYRIVSQRPMH-DS 184
Query: 203 GKVDGPPMLAG 213
D PP +G
Sbjct: 185 PDEDSPPGNSG 195
>gi|17137216|ref|NP_477170.1| Rab11, isoform B [Drosophila melanogaster]
gi|19549675|ref|NP_599137.1| Rab11, isoform A [Drosophila melanogaster]
gi|125776219|ref|XP_001359206.1| GA19116 [Drosophila pseudoobscura pseudoobscura]
gi|194899580|ref|XP_001979337.1| GG24366 [Drosophila erecta]
gi|195037917|ref|XP_001990407.1| GH18257 [Drosophila grimshawi]
gi|195107587|ref|XP_001998390.1| GI23656 [Drosophila mojavensis]
gi|195152035|ref|XP_002016944.1| GL21786 [Drosophila persimilis]
gi|195355578|ref|XP_002044268.1| GM15065 [Drosophila sechellia]
gi|195388968|ref|XP_002053150.1| GJ23499 [Drosophila virilis]
gi|2313039|dbj|BAA21708.1| rab11 [Drosophila melanogaster]
gi|6517204|dbj|BAA87880.1| Drab11 [Drosophila melanogaster]
gi|7300703|gb|AAF55850.1| Rab11, isoform A [Drosophila melanogaster]
gi|17944208|gb|AAL47999.1| GM06568p [Drosophila melanogaster]
gi|21064359|gb|AAM29409.1| RE11886p [Drosophila melanogaster]
gi|23171847|gb|AAN13849.1| Rab11, isoform B [Drosophila melanogaster]
gi|54638949|gb|EAL28351.1| GA19116 [Drosophila pseudoobscura pseudoobscura]
gi|190651040|gb|EDV48295.1| GG24366 [Drosophila erecta]
gi|193894603|gb|EDV93469.1| GH18257 [Drosophila grimshawi]
gi|193914984|gb|EDW13851.1| GI23656 [Drosophila mojavensis]
gi|194112001|gb|EDW34044.1| GL21786 [Drosophila persimilis]
gi|194129569|gb|EDW51612.1| GM15065 [Drosophila sechellia]
gi|194151236|gb|EDW66670.1| GJ23499 [Drosophila virilis]
gi|220943114|gb|ACL84100.1| CG5771-PA [synthetic construct]
gi|220953258|gb|ACL89172.1| Rab11-PA [synthetic construct]
Length = 214
Score = 232 bits (591), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 118/213 (55%), Positives = 156/213 (73%), Gaps = 12/213 (5%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIW
Sbjct: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI K ++++V RW+ ELR HAD +I I+L+GNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNK 125
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
SDL +R+V ++A FAE GL F E SAL+ NV+TAF +L EIY VS+K++
Sbjct: 126 SDLRHLRSVPTDEAKLFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQIR--- 182
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLSTC 235
PP + DVI +++E ++K T
Sbjct: 183 ----DPP-----EGDVIRPSNVEPIDVKPTVTA 206
>gi|332373948|gb|AEE62115.1| unknown [Dendroctonus ponderosae]
Length = 215
Score = 232 bits (591), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 111/176 (63%), Positives = 141/176 (80%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIW
Sbjct: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+T+AYYRGA+GA++VYDI K ++++V RW+ ELR HAD +I I+L+GNK
Sbjct: 66 DTAGQERYRAITAAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNK 125
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL 198
SDL +RAV E+A FAE GL F E SAL+ NVD AF +L EIY VS+K++
Sbjct: 126 SDLRHLRAVLTEEAKAFAERNGLSFIETSALDSTNVDLAFQNILTEIYRIVSQKQI 181
>gi|763130|emb|CAA56176.1| YPT3 [Homo sapiens]
Length = 218
Score = 232 bits (591), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 117/203 (57%), Positives = 149/203 (73%), Gaps = 10/203 (4%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIW
Sbjct: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYR +TSAYYRGA+GA++VYDI K ++++V RW++ELR HADS+I I+L+GNK
Sbjct: 66 DTAGQERYRRITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNK 125
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL---- 198
SDL +RAV ++A FAE L F E SAL+ NV+ AF +L EIY VS+K++
Sbjct: 126 SDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADRA 185
Query: 199 ----ECGNGKVD--GPPMLAGSK 215
GN VD PP G K
Sbjct: 186 AHDESPGNNVVDISVPPTTDGQK 208
>gi|348504740|ref|XP_003439919.1| PREDICTED: ras-related protein Rab-11B-like [Oreochromis niloticus]
Length = 218
Score = 232 bits (591), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 116/203 (57%), Positives = 151/203 (74%), Gaps = 10/203 (4%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIW
Sbjct: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI K ++++V RW++ELR HAD++I I+L+GNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNK 125
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL---- 198
SDL +RAV ++A FAE L F E SAL+ NV+ AF +L EIY VS+K++
Sbjct: 126 SDLRHLRAVPTDEARAFAEKNTLSFIETSALDSTNVEEAFKSILTEIYRIVSQKQISDRS 185
Query: 199 ----ECGNGKVD--GPPMLAGSK 215
GN VD PP + G +
Sbjct: 186 AHEDSPGNNVVDISVPPTMDGQR 208
>gi|255727853|ref|XP_002548852.1| GTP-binding protein YPT32/YPT11 [Candida tropicalis MYA-3404]
gi|240133168|gb|EER32724.1| GTP-binding protein YPT32/YPT11 [Candida tropicalis MYA-3404]
Length = 219
Score = 232 bits (591), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 106/174 (60%), Positives = 144/174 (82%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
+Y++K+V+IGDS VGKS +LSRFT++EF +S+STIGVEF TRT+ I+GK +KAQIWDTA
Sbjct: 13 EYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRVKAQIWDTA 72
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQERYRA+TSAYYRGA+GA++VYDI K +S++ V+RW++EL+ HAD++I I L+GNKSDL
Sbjct: 73 GQERYRAITSAYYRGAVGALIVYDIAKTESYESVSRWLKELKEHADANIVIELVGNKSDL 132
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELE 199
+RAV ++A FA + L F+EASAL+ DNVD +F +LL+ IY +SK +LE
Sbjct: 133 DHLRAVPTDEAKNFAMENNLLFTEASALSSDNVDLSFHQLLKNIYEMISKHQLE 186
>gi|401402024|ref|XP_003881151.1| unnamed protein product [Neospora caninum Liverpool]
gi|325115563|emb|CBZ51118.1| unnamed protein product [Neospora caninum Liverpool]
Length = 201
Score = 232 bits (591), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 118/198 (59%), Positives = 152/198 (76%), Gaps = 11/198 (5%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTIN-GKIIKAQIWDT 84
DY++K+V+IGDS VGKS +LSRFT++EF +SKSTIGVEF T++V ++ GK+IKAQIWDT
Sbjct: 9 DYLYKIVLIGDSGVGKSNMLSRFTRDEFNLESKSTIGVEFATKSVYLDEGKVIKAQIWDT 68
Query: 85 AGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSD 144
AGQERYRA+TSAYYRGA+GA++VYDITKRQSF++V RW++ELR HAD +I I+L+GNKSD
Sbjct: 69 AGQERYRAITSAYYRGAVGALLVYDITKRQSFENVERWLKELRDHADPNIVILLVGNKSD 128
Query: 145 LVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNGK 204
L +RAVS E+A +FA + L F E SAL+ NV+ AF ++L EIY KK++E
Sbjct: 129 LKHLRAVSVEEATKFANREHLAFIETSALDATNVEQAFHQILAEIYLLRQKKQIE----- 183
Query: 205 VDGPPMLA----GSKIDV 218
D P A G KI V
Sbjct: 184 -DNPQSTAQPGRGQKIHV 200
>gi|357603306|gb|EHJ63705.1| ras-related GTP-binding protein Rab11 [Danaus plexippus]
Length = 213
Score = 232 bits (591), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 110/176 (62%), Positives = 141/176 (80%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIW
Sbjct: 6 DEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI K S+++V RW+ ELR HAD +I I+L+GNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNK 125
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL 198
SDL +R++ E+A FAE GL F E SAL+ NV+ AF +L EIY VS+K++
Sbjct: 126 SDLRHLRSIPTEEAKAFAERNGLSFIETSALDSTNVEPAFQNILTEIYRIVSQKQM 181
>gi|3024506|sp|Q40523.1|RB11A_TOBAC RecName: Full=Ras-related protein Rab11A
gi|623582|gb|AAA74115.1| Nt-Rab11a [Nicotiana tabacum]
Length = 216
Score = 232 bits (591), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 113/178 (63%), Positives = 138/178 (77%)
Query: 19 NMIPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIK 78
N + + DY+FK+V+IGDS VGKS ILSRFT+NEF +SKSTIGVEF TRT+ + GK +K
Sbjct: 3 NRVDHEYDYLFKMVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVK 62
Query: 79 AQIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIIL 138
AQIWDTAGQERYRA+TSAYYRGA+GA++ YDITKRQ+FD+V RW+ ELR H DS+I IIL
Sbjct: 63 AQIWDTAGQERYRAITSAYYRGAVGALLFYDITKRQTFDNVQRWLRELRDHRDSNIVIIL 122
Query: 139 IGNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKK 196
GNKSDL +RAVS +D + +GL F E SAL NVD AF +L +IY +SKK
Sbjct: 123 AGNKSDLKHLRAVSEQDDQALVKKEGLSFLETSALEALNVDKAFQTILTDIYHIISKK 180
>gi|388497366|gb|AFK36749.1| unknown [Lotus japonicus]
Length = 218
Score = 232 bits (591), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 115/199 (57%), Positives = 150/199 (75%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
++ DY+FKVV+IGDS VGKS + SRFT+NEF +SKSTIGVEF TRT+ + G+++KAQIW
Sbjct: 7 EEYDYLFKVVLIGDSGVGKSNLFSRFTRNEFCLESKSTIGVEFATRTLEVEGRMVKAQIW 66
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGALGA++VYD+TK SF++V RW++ELR HAD++I I+LIGNK
Sbjct: 67 DTAGQERYRAITSAYYRGALGALLVYDVTKPTSFENVTRWLKELRDHADANIVIMLIGNK 126
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
+DL +R V+ EDA +AE +GL F E SAL NVD AF +L +IY +SKK L +
Sbjct: 127 TDLKHLRGVATEDAQSYAEKEGLSFIETSALEATNVDKAFQTILAQIYRIISKKSLSSSS 186
Query: 203 GKVDGPPMLAGSKIDVISG 221
P + G+ I + G
Sbjct: 187 TDPSAPNIKQGNTITIEGG 205
>gi|47216652|emb|CAG04850.1| unnamed protein product [Tetraodon nigroviridis]
Length = 217
Score = 232 bits (591), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 111/186 (59%), Positives = 146/186 (78%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIW
Sbjct: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI K ++++V RW++ELR HAD++I I+L+GNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNK 125
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
SDL +RAV ++A FAE L F E SAL+ NV+ AF +L EIY VS+K++ +
Sbjct: 126 SDLRHLRAVPTDEARAFAEKNTLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQISDRS 185
Query: 203 GKVDGP 208
G + P
Sbjct: 186 GHEESP 191
>gi|388506820|gb|AFK41476.1| unknown [Lotus japonicus]
Length = 216
Score = 231 bits (590), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 118/216 (54%), Positives = 157/216 (72%), Gaps = 5/216 (2%)
Query: 21 IPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQ 80
+ + DY+FK+V+IGDS VGKS ILSRFT+NEF +SKSTIGVEF TRT+ + GK +KAQ
Sbjct: 5 VDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQ 64
Query: 81 IWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIG 140
IWDTAGQERYRA+TSAYYRGA+GA++VY +TKRQ+F++V RW+ ELR HAD++I I++ G
Sbjct: 65 IWDTAGQERYRAITSAYYRGAVGALLVYGMTKRQTFENVQRWLRELRDHADANIVIMMAG 124
Query: 141 NKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELEC 200
NKSDL +RAVS+EDA AE + L F E SAL NV+ AF +L +IY +S+K L
Sbjct: 125 NKSDLNHLRAVSSEDAQNLAEKESLSFLETSALEALNVEKAFQTILFDIYQIISRKAL-A 183
Query: 201 GNGKVDGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
+ G+ I+V ++L S ++K + CS
Sbjct: 184 AQEAASTTSLPHGTTINV---SNLS-SNVEKKTCCS 215
>gi|448525743|ref|XP_003869190.1| Ypt31 protein [Candida orthopsilosis Co 90-125]
gi|380353543|emb|CCG23053.1| Ypt31 protein [Candida orthopsilosis]
Length = 221
Score = 231 bits (590), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 108/184 (58%), Positives = 147/184 (79%), Gaps = 1/184 (0%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
+Y++K+V+IGDS VGKS +LSRFT++EF +S+STIGVEF TRT+ I+GK +KAQIWDTA
Sbjct: 13 EYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRVKAQIWDTA 72
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQERYRA+TSAYYRGA+GA++VYDI K +S++ V+RW++EL+ HAD++I I L+GNKSDL
Sbjct: 73 GQERYRAITSAYYRGAVGALIVYDIAKTESYESVSRWLKELKEHADANIVIELVGNKSDL 132
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECG-NGK 204
+RAV E+A FA + L F+EASAL+ DNVD +F +LL+ IY +SK +L+ G
Sbjct: 133 DHLRAVPTEEARNFALENNLLFTEASALSSDNVDLSFHQLLKNIYEMISKHQLDTNEQGG 192
Query: 205 VDGP 208
+ P
Sbjct: 193 LKAP 196
>gi|15233873|ref|NP_193578.1| RAB GTPase homolog A1E [Arabidopsis thaliana]
gi|297800216|ref|XP_002867992.1| hypothetical protein ARALYDRAFT_493018 [Arabidopsis lyrata subsp.
lyrata]
gi|75098755|sp|O49513.1|RAA1E_ARATH RecName: Full=Ras-related protein RABA1e; Short=AtRABA1e
gi|2832648|emb|CAA16723.1| membrane-bound small GTP-binding - like protein [Arabidopsis
thaliana]
gi|7268636|emb|CAB78845.1| membrane-bound small GTP-binding-like protein [Arabidopsis
thaliana]
gi|38603932|gb|AAR24711.1| At4g18430 [Arabidopsis thaliana]
gi|44681422|gb|AAS47651.1| At4g18430 [Arabidopsis thaliana]
gi|297313828|gb|EFH44251.1| hypothetical protein ARALYDRAFT_493018 [Arabidopsis lyrata subsp.
lyrata]
gi|332658645|gb|AEE84045.1| RAB GTPase homolog A1E [Arabidopsis thaliana]
Length = 217
Score = 231 bits (590), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 114/214 (53%), Positives = 158/214 (73%), Gaps = 5/214 (2%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D DY+FK+V+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR+V ++ KIIKAQ+W
Sbjct: 8 DDYDYLFKLVLIGDSGVGKSNLLSRFTRNEFSIESKSTIGVEFATRSVHVDEKIIKAQLW 67
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDIT+ +F++V RW++ELR H D+++ I+L+GNK
Sbjct: 68 DTAGQERYRAITSAYYRGAVGALLVYDITRHITFENVERWLKELRDHTDANVVIMLVGNK 127
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
+DL +RAV E+A F+E + +FF E SAL+ NV+ AF +L +IY +S+K L+
Sbjct: 128 ADLRHLRAVPTEEARSFSERENMFFMETSALDATNVEQAFTHVLTQIYRVMSRKALD--- 184
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
G D + G ID+ G +++ +K CS
Sbjct: 185 GTGDPMSLPKGQTIDI--GNKDDVTAVKSSGCCS 216
>gi|76257404|gb|ABA41006.1| Rab11 protein [Aiptasia pulchella]
Length = 218
Score = 231 bits (590), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 110/177 (62%), Positives = 142/177 (80%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIW
Sbjct: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI K ++++V RW++ELR HADS+I I+ +GNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMQVGNK 125
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELE 199
SDL +RAV ++A FAE GL F E SAL+ NV+ AF +L EIY VS+K++
Sbjct: 126 SDLRHLRAVPTDEAKAFAEKNGLSFIETSALDSTNVEVAFQNILTEIYHIVSQKQIH 182
>gi|388513607|gb|AFK44865.1| unknown [Lotus japonicus]
Length = 196
Score = 231 bits (590), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 108/168 (64%), Positives = 138/168 (82%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
++ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TRT+ + G+++KAQIW
Sbjct: 7 EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLEVEGRMVKAQIW 66
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGALGA++VYD+TK SF++V RW++ELR HAD++I I+LIGNK
Sbjct: 67 DTAGQERYRAITSAYYRGALGALLVYDVTKPTSFENVTRWLKELRDHADANIVIMLIGNK 126
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIY 190
+DL +R V+ EDA +AE +GL F E SAL NVD AF +L +IY
Sbjct: 127 TDLKHLRGVATEDAQSYAEKEGLSFIETSALEATNVDKAFQTILAQIY 174
>gi|50540176|ref|NP_001002555.1| ras-related protein Rab-11B [Danio rerio]
gi|326665348|ref|XP_003198017.1| PREDICTED: ras-related protein Rab-11B-like isoform 1 [Danio rerio]
gi|326665350|ref|XP_003198018.1| PREDICTED: ras-related protein Rab-11B-like isoform 2 [Danio rerio]
gi|49904559|gb|AAH76247.1| Zgc:92772 [Danio rerio]
Length = 218
Score = 231 bits (590), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 116/203 (57%), Positives = 150/203 (73%), Gaps = 10/203 (4%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ D++FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIW
Sbjct: 6 DEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI K ++++V RW++ELR HAD++I I+L+GNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNK 125
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL---- 198
SDL +RAV ++A FAE L F E SAL+ NV+ AF +L EIY VS+K++
Sbjct: 126 SDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIAERS 185
Query: 199 ----ECGNGKVD--GPPMLAGSK 215
GN VD PP G K
Sbjct: 186 AHDESPGNNVVDISVPPTTDGQK 208
>gi|391341972|ref|XP_003745298.1| PREDICTED: ras-related protein Rab-11A-like [Metaseiulus
occidentalis]
Length = 218
Score = 231 bits (590), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 111/196 (56%), Positives = 149/196 (76%), Gaps = 1/196 (0%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ + GK +KAQIW
Sbjct: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVEGKTVKAQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI K +++HV RW++ELR HAD I I+L+GNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHITYEHVERWLKELRDHADHHIVIMLVGNK 125
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
+DL +RAV ++A FAE L F E SAL+ NV++AF ++L +IY VS+K++ +
Sbjct: 126 NDLRHLRAVPTDEAKAFAEKNNLNFIETSALDSTNVESAFQQILTDIYHIVSRKQM-AND 184
Query: 203 GKVDGPPMLAGSKIDV 218
G D + +KI +
Sbjct: 185 GDADIAALKNENKITI 200
>gi|410921188|ref|XP_003974065.1| PREDICTED: ras-related protein Rab-11B-like [Takifugu rubripes]
Length = 218
Score = 231 bits (589), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 111/186 (59%), Positives = 146/186 (78%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIW
Sbjct: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI K ++++V RW++ELR HAD++I I+L+GNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNK 125
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
SDL +RAV ++A FAE L F E SAL+ NV+ AF +L EIY VS+K++ +
Sbjct: 126 SDLRHLRAVPTDEARAFAEKNTLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQISDRS 185
Query: 203 GKVDGP 208
G + P
Sbjct: 186 GHDESP 191
>gi|187607443|ref|NP_001120303.1| uncharacterized protein LOC100145363 [Xenopus (Silurana)
tropicalis]
gi|156914717|gb|AAI52631.1| Zgc:92772 protein [Danio rerio]
gi|169642085|gb|AAI60799.1| LOC100145363 protein [Xenopus (Silurana) tropicalis]
Length = 218
Score = 231 bits (589), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 116/203 (57%), Positives = 150/203 (73%), Gaps = 10/203 (4%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ D++FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIW
Sbjct: 6 DEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI K ++++V RW++ELR HAD++I I+L+GNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNK 125
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL---- 198
SDL +RAV ++A FAE L F E SAL+ NV+ AF +L EIY VS+K++
Sbjct: 126 SDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIAERS 185
Query: 199 ----ECGNGKVD--GPPMLAGSK 215
GN VD PP G K
Sbjct: 186 AHGESPGNNVVDISVPPTTDGQK 208
>gi|112983314|ref|NP_001037618.1| ras-related GTP-binding protein Rab11 [Bombyx mori]
gi|102993180|gb|ABF71467.1| ras-related GTP-binding protein Rab11 [Bombyx mori]
Length = 213
Score = 231 bits (589), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 109/176 (61%), Positives = 141/176 (80%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIW
Sbjct: 6 DEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI K S+++V RW+ ELR HAD +I I+L+GNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNK 125
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL 198
SDL +R++ E+A FAE GL F E SAL+ NV+ AF +L EIY VS++++
Sbjct: 126 SDLRHLRSIPTEEAKAFAEANGLSFIETSALDSTNVEPAFQNILTEIYRIVSQRQM 181
>gi|449443538|ref|XP_004139534.1| PREDICTED: ras-related protein RABA5a-like [Cucumis sativus]
gi|449508980|ref|XP_004163459.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein RABA5a-like
[Cucumis sativus]
Length = 224
Score = 231 bits (589), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 120/216 (55%), Positives = 152/216 (70%), Gaps = 9/216 (4%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
DY+FK+V+IGDSAVGKS +L+RF ++EF+ +SKSTIGVEFQT+ + INGK IKAQIWDTA
Sbjct: 12 DYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKIEINGKEIKAQIWDTA 71
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQER+RAVTSAYYRGA+GA++VYDI++RQ+FD + RW+ EL H+D ++ IL+GNKSDL
Sbjct: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKK-----ELEC 200
D R V + AE QGLFF E SAL+ NV AF +++EIY +S+K EL+
Sbjct: 132 KDAREVPTAEGKSLAEAQGLFFIETSALDSSNVTNAFQTVVKEIYNILSRKVMISQELK- 190
Query: 201 GNGKVDGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
K D M G VI G D E KK CS
Sbjct: 191 ---KQDVSWMENGKTTVVIQGEDQVEGEPKKGGCCS 223
>gi|443899278|dbj|GAC76609.1| M-phase inducer phosphatase [Pseudozyma antarctica T-34]
Length = 431
Score = 231 bits (589), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 107/174 (61%), Positives = 139/174 (79%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
DY+FKVV+IGDS GKS +LSRFT+NEF +SKSTIGVEF TR+++++GK +KAQIWDTA
Sbjct: 226 DYLFKVVLIGDSGTGKSNLLSRFTRNEFSLESKSTIGVEFATRSISVDGKTVKAQIWDTA 285
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQERYRA+TSAYYRGA+GA++VYDI K ++ +V+RW++ELR HADS+I I+L+GNKSDL
Sbjct: 286 GQERYRAITSAYYRGAVGALLVYDIAKHPTYVNVSRWLKELRDHADSNIVIMLVGNKSDL 345
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELE 199
+RAV ++A FA + L F E SAL+ NV+ AF +L EIY VS K L+
Sbjct: 346 RHLRAVPTDEAKAFAAENNLSFIETSALDASNVEQAFQNILTEIYRIVSNKALQ 399
>gi|213515102|ref|NP_001133884.1| Ras-related protein Rab-11B [Salmo salar]
gi|209155688|gb|ACI34076.1| Ras-related protein Rab-11B [Salmo salar]
Length = 217
Score = 231 bits (589), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 116/203 (57%), Positives = 151/203 (74%), Gaps = 10/203 (4%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK+IKAQIW
Sbjct: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKMIKAQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI K ++++V RW++ELR HAD++I I+L+GNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNK 125
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL---- 198
SDL +RAV ++A FAE L F E SAL+ NV+ AF +L EI+ VS+K++
Sbjct: 126 SDLRHLRAVPTDEARAFAEKNTLSFIETSALDSTNVEEAFKNILTEIHRIVSQKQIADRS 185
Query: 199 ----ECGNGKVD--GPPMLAGSK 215
GN VD PP G K
Sbjct: 186 AHDESPGNNVVDISVPPTTDGQK 208
>gi|1370156|emb|CAA98184.1| RAB11H [Lotus japonicus]
Length = 218
Score = 231 bits (589), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 116/215 (53%), Positives = 159/215 (73%), Gaps = 6/215 (2%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D DY+FKVV+IGDS VGKS +LSRFTKNEF +SKSTIGVEF TR++ ++ K++KAQ+W
Sbjct: 8 DDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQVW 67
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYD+++ +F++V RW++ELR H D++I ++L+GNK
Sbjct: 68 DTAGQERYRAITSAYYRGAVGALLVYDVSRHVTFENVERWLKELRDHTDTNIVVMLVGNK 127
Query: 143 SDLVDMRAVSAEDAVEF-AEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECG 201
+DL +RAVS ED+ F ++ FF E SAL NV+ AF +L +IY VSKK LE G
Sbjct: 128 ADLRHLRAVSTEDSSGFLLNERTHFFMETSALESLNVENAFTEVLTQIYRVVSKKALEIG 187
Query: 202 NGKVDGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
+ D + G I+V G+ ++S +KK CS
Sbjct: 188 D---DPTALPKGQTINV--GSRDDVSPVKKSGCCS 217
>gi|91076508|ref|XP_973251.1| PREDICTED: similar to putative rab11 [Tribolium castaneum]
gi|270002909|gb|EEZ99356.1| Rab-protein 11 [Tribolium castaneum]
Length = 215
Score = 231 bits (589), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 111/176 (63%), Positives = 141/176 (80%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIW
Sbjct: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSMQVDGKTIKAQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+T+AYYRGA+GA++VYDI K ++++V RW+ ELR HAD +I I+L+GNK
Sbjct: 66 DTAGQERYRAITAAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNK 125
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL 198
SDL +RAV E+A FAE GL F E SAL+ NVD AF +L EIY VS+K++
Sbjct: 126 SDLRHLRAVLTEEAKAFAERNGLSFIETSALDSTNVDLAFQNILTEIYRIVSQKQI 181
>gi|154277098|ref|XP_001539394.1| Rab1a [Ajellomyces capsulatus NAm1]
gi|150414467|gb|EDN09832.1| Rab1a [Ajellomyces capsulatus NAm1]
gi|225554603|gb|EEH02899.1| GTP-binding protein ypt3 [Ajellomyces capsulatus G186AR]
gi|240276947|gb|EER40457.1| GTP-binding protein [Ajellomyces capsulatus H143]
gi|325094881|gb|EGC48191.1| GTP-binding protein ypt3 [Ajellomyces capsulatus H88]
Length = 210
Score = 231 bits (589), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 112/183 (61%), Positives = 140/183 (76%)
Query: 20 MIPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKA 79
M D+ D++FKVV+IGDS VGKS +LSRFT+NEF DSKSTIGVEF TR++ ++GK IKA
Sbjct: 1 MANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDGKTIKA 60
Query: 80 QIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILI 139
QIWDTAGQERYRA+TSAYYRGA+GA++VYD TK Q+F + RW++ELR HAD +I I+L+
Sbjct: 61 QIWDTAGQERYRAITSAYYRGAVGALLVYDTTKEQTFANCERWLKELREHADKNIVIMLV 120
Query: 140 GNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELE 199
GNK D +RA+ + EFAE + L F E SAL+ NV+ AF +L EIY VS K LE
Sbjct: 121 GNKIDQKHVRAIKTDQGAEFAEARKLSFIETSALDATNVELAFQNILTEIYRIVSSKALE 180
Query: 200 CGN 202
GN
Sbjct: 181 NGN 183
>gi|221048037|gb|ACL98126.1| RAB11B protein [Epinephelus coioides]
Length = 218
Score = 231 bits (589), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 116/203 (57%), Positives = 150/203 (73%), Gaps = 10/203 (4%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIW
Sbjct: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI K ++++V RW++ELR HAD++I I+L+GNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNK 125
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL---- 198
SDL +RAV ++A FAE L F E SAL+ NV+ AF +L EIY VS+K++
Sbjct: 126 SDLRHLRAVPTDEARAFAEGNTLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQISDRS 185
Query: 199 ----ECGNGKVD--GPPMLAGSK 215
GN VD PP G +
Sbjct: 186 AHDESPGNNVVDISLPPTTEGQR 208
>gi|354545830|emb|CCE42558.1| hypothetical protein CPAR2_202010 [Candida parapsilosis]
Length = 221
Score = 231 bits (589), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 106/176 (60%), Positives = 144/176 (81%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
+Y++K+V+IGDS VGKS +LSRFT++EF +S+STIGVEF TRT+ I+GK +KAQIWDTA
Sbjct: 13 EYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRVKAQIWDTA 72
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQERYRA+TSAYYRGA+GA++VYDI K +S++ V+RW++EL+ HAD++I I L+GNKSDL
Sbjct: 73 GQERYRAITSAYYRGAVGALIVYDIAKTESYESVSRWLKELKEHADANIVIELVGNKSDL 132
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECG 201
+RAV E+A FA + L F+EASAL+ DNVD +F +LL+ IY +SK +L+
Sbjct: 133 DHLRAVPTEEARNFALENNLLFTEASALSSDNVDLSFHQLLKNIYEMISKHQLDTN 188
>gi|237838191|ref|XP_002368393.1| Ras family domain-containing protein [Toxoplasma gondii ME49]
gi|31745716|gb|AAP57202.1| Rab11 [Toxoplasma gondii]
gi|211966057|gb|EEB01253.1| Ras family domain-containing protein [Toxoplasma gondii ME49]
gi|221484334|gb|EEE22630.1| rab11, putative [Toxoplasma gondii GT1]
Length = 219
Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 111/175 (63%), Positives = 145/175 (82%), Gaps = 1/175 (0%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTIN-GKIIKAQIWDT 84
DY++K+V+IGDS VGKS +LSRFT++EF +SKSTIGVEF T++V ++ GK+IKAQIWDT
Sbjct: 9 DYLYKIVLIGDSGVGKSNMLSRFTRDEFNLESKSTIGVEFATKSVYLDEGKVIKAQIWDT 68
Query: 85 AGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSD 144
AGQERYRA+TSAYYRGA+GA++VYDITKRQSF++V RW++ELR HAD +I I+L+GNKSD
Sbjct: 69 AGQERYRAITSAYYRGAVGALLVYDITKRQSFENVERWLKELRDHADPNIVILLVGNKSD 128
Query: 145 LVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELE 199
L +RAVS E+A +FA + L F E SAL+ NV+ AF ++L EIY KK++E
Sbjct: 129 LKHLRAVSVEEATKFANREHLAFIETSALDATNVEQAFHQILAEIYLLRQKKQIE 183
>gi|124513178|ref|XP_001349945.1| Rab11a, GTPase [Plasmodium falciparum 3D7]
gi|1220272|emb|CAA63652.1| small GTPase rab11 [Plasmodium falciparum 3D7]
gi|23615362|emb|CAD52353.1| Rab11a, GTPase [Plasmodium falciparum 3D7]
Length = 216
Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 116/217 (53%), Positives = 158/217 (72%), Gaps = 5/217 (2%)
Query: 20 MIPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTI-NGKIIK 78
M D DY+FK+V+IGDS VGKS +LSRFT++EF +SKSTIGVEF T+++ + N KIIK
Sbjct: 3 MKEDYYDYLFKIVLIGDSGVGKSNLLSRFTRDEFNLESKSTIGVEFATKSIQLKNNKIIK 62
Query: 79 AQIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIIL 138
AQIWDTAGQERYRA+TSAYYRGA+GA++VYDITK+ SF+++ +W++ELR +ADS+I I+L
Sbjct: 63 AQIWDTAGQERYRAITSAYYRGAVGALLVYDITKKNSFENIEKWLKELRDNADSNIVILL 122
Query: 139 IGNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL 198
+GNKSDL +R ++ DA ++A+ + L F E SAL NV+ AF +LL EIY KK+
Sbjct: 123 VGNKSDLKHLRVINDNDATQYAKKEKLAFIETSALEATNVELAFHQLLNEIYNVRQKKQA 182
Query: 199 ECGNGKVDGPPMLAGSKIDVISGADLEISEMKKLSTC 235
+ + P G KI+V D + +E KK + C
Sbjct: 183 TKNDDNLSIQPR--GKKINV--DDDNDKNETKKKNKC 215
>gi|365990545|ref|XP_003672102.1| hypothetical protein NDAI_0I02910 [Naumovozyma dairenensis CBS 421]
gi|343770876|emb|CCD26859.1| hypothetical protein NDAI_0I02910 [Naumovozyma dairenensis CBS 421]
Length = 219
Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 112/212 (52%), Positives = 149/212 (70%), Gaps = 4/212 (1%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
DY+FK+V+IGDS VGKS +LSRFT NEF +SKSTIGVEF TRT+ + GK IKAQIWDTA
Sbjct: 11 DYLFKIVLIGDSGVGKSNLLSRFTTNEFNIESKSTIGVEFATRTIEVEGKKIKAQIWDTA 70
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQERYRA+TSAYYRGA+GA++VYDI+K ++++ W+ EL+ +AD ++ + LIGNKSDL
Sbjct: 71 GQERYRAITSAYYRGAVGALIVYDISKSSTYENCNHWLTELKENADDNVAVGLIGNKSDL 130
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNGKV 205
+RAV ++A FA + L F+E SALN +NVD AF L+ IY VSK +++ G+
Sbjct: 131 AHLRAVPTDEAKNFALENQLLFTETSALNSENVDQAFRELITAIYQMVSKHQVDLGDSNT 190
Query: 206 DGPPMLAGSKIDVISGADLEISEMKKLSTCSC 237
G G I + + E KK S+ +C
Sbjct: 191 SGATAPKGPTISLTPAPN----ENKKSSSNNC 218
>gi|290462207|gb|ADD24151.1| Ras-related protein Rab-11A [Lepeophtheirus salmonis]
Length = 217
Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 108/176 (61%), Positives = 141/176 (80%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
++ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK +KAQIW
Sbjct: 6 EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTVKAQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI K ++++V RW+ ELR HADS+I I+L+GNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVDRWLRELRDHADSNIVIMLVGNK 125
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL 198
DL +RAV ++A FAE L F E SAL+ NV+TAF +L EIY VS+++L
Sbjct: 126 CDLRHLRAVPTDEAKHFAEQNNLSFIETSALDSTNVETAFHNILTEIYRIVSQRQL 181
>gi|148227083|ref|NP_001080132.1| RAB11B, member RAS oncogene family, gene 1 [Xenopus laevis]
gi|27370881|gb|AAH41250.1| Rab11b protein [Xenopus laevis]
Length = 218
Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 116/203 (57%), Positives = 149/203 (73%), Gaps = 10/203 (4%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIW
Sbjct: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRG +GA++VYDI K ++++V RW++ELR HAD++I I+L+GNK
Sbjct: 66 DTAGQERYRAITSAYYRGVVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNK 125
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL---- 198
SDL +RAV ++A FAE L F E SAL+ NV+ AF +L EIY VS+K++
Sbjct: 126 SDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADRS 185
Query: 199 ----ECGNGKVD--GPPMLAGSK 215
GN VD PP G K
Sbjct: 186 AHDESPGNNVVDISVPPTTDGQK 208
>gi|308322445|gb|ADO28360.1| ras-related protein rab-11b [Ictalurus furcatus]
Length = 218
Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 116/203 (57%), Positives = 150/203 (73%), Gaps = 10/203 (4%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ D++FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIW
Sbjct: 6 DEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI K ++++V RW++ELR HAD++I I+L+GNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNK 125
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL---- 198
SDL +RAV ++A FAE L F E SAL+ NV+ AF +L EIY VS+K++
Sbjct: 126 SDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADRS 185
Query: 199 ----ECGNGKVD--GPPMLAGSK 215
GN VD PP G K
Sbjct: 186 AHDESPGNNVVDISVPPTTDGQK 208
>gi|171688708|ref|XP_001909294.1| hypothetical protein [Podospora anserina S mat+]
gi|170944316|emb|CAP70426.1| unnamed protein product [Podospora anserina S mat+]
Length = 211
Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 113/189 (59%), Positives = 144/189 (76%)
Query: 20 MIPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKA 79
M D+ D++FKVV+IGDS VGKS +LSRFT+NEF DSKSTIGVEF TR++ ++ K IKA
Sbjct: 1 MANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDNKTIKA 60
Query: 80 QIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILI 139
QIWDTAGQERYRA+TSAYYRGA+GA++VYDI+K ++++V RW++ELR HADS+I I+L+
Sbjct: 61 QIWDTAGQERYRAITSAYYRGAVGALLVYDISKNITYENVTRWLKELRDHADSNIVIMLV 120
Query: 140 GNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELE 199
GNKSDL +RAV +DA FA + L F E SAL+ NV+ AF +L EIY VS K
Sbjct: 121 GNKSDLRHLRAVPTDDAKNFAAENHLSFIETSALDATNVELAFQNILTEIYNIVSTKSFA 180
Query: 200 CGNGKVDGP 208
+GK P
Sbjct: 181 EEDGKKFDP 189
>gi|149689184|gb|ABR27957.1| putative rab11 [Triatoma infestans]
Length = 215
Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 110/176 (62%), Positives = 140/176 (79%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIW
Sbjct: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIVVDGKTIKAQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI K ++++V RW+ ELR HAD +I I+L+GNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNK 125
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL 198
SDL +RAV ++A FAE L F E SAL+ NV+TAF +L EIY VS K++
Sbjct: 126 SDLRHLRAVPTDEAKNFAERNALSFIETSALDSTNVETAFQNILTEIYRIVSXKQI 181
>gi|303273638|ref|XP_003056179.1| ras-related protein rab11a-like protein [Micromonas pusilla
CCMP1545]
gi|226462263|gb|EEH59555.1| ras-related protein rab11a-like protein [Micromonas pusilla
CCMP1545]
Length = 216
Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 109/174 (62%), Positives = 139/174 (79%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TRT+ ++ IKAQIW
Sbjct: 6 DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTIEVDTNTIKAQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDITK +S++ V +W++ELR HAD++I I+LIGNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGALLVYDITKSESYEDVEKWLKELRDHADANIVIMLIGNK 125
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKK 196
DL +R V EDA FA ++GL F+E SAL NV+ AF ++L E++ VSKK
Sbjct: 126 CDLKHLRCVQTEDARLFAANEGLSFTETSALESTNVELAFHQILTEVFQIVSKK 179
>gi|3024529|sp|Q40195.1|RB11E_LOTJA RecName: Full=Ras-related protein Rab11E
gi|1370150|emb|CAA98181.1| RAB11E [Lotus japonicus]
Length = 218
Score = 231 bits (588), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 107/180 (59%), Positives = 141/180 (78%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FK+V+IGDS VGKS +LSRFT+NEF +SKSTIGVEF T+++ I+GK+IKAQIW
Sbjct: 8 DEYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLNIDGKVIKAQIW 67
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYD+T+ +F+ RW++ELR H D +I ++LIGNK
Sbjct: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRSTTFETAGRWLKELRDHTDPNIVVMLIGNK 127
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
SDL + VS ED FAE + L+F E SAL NV+ AF +L +IY VSK+ +E G+
Sbjct: 128 SDLRHLVTVSTEDGKAFAEKESLYFMETSALEATNVENAFSEVLTQIYRIVSKRAVEAGD 187
>gi|409046556|gb|EKM56036.1| hypothetical protein PHACADRAFT_257063 [Phanerochaete carnosa
HHB-10118-sp]
Length = 212
Score = 231 bits (588), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 108/174 (62%), Positives = 141/174 (81%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
D++FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ I+GK +KAQIWDTA
Sbjct: 8 DFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSLAIDGKTVKAQIWDTA 67
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQERYRA+TSAYYRGA+GA++VYDI+K Q++ +V RW++ELR HAD +I I+L+GNKSDL
Sbjct: 68 GQERYRAITSAYYRGAVGALLVYDISKHQTYSNVTRWLKELRDHADQNIVIMLVGNKSDL 127
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELE 199
+RAV ++A F+ + GL F E SAL+ NV++AF +L +IY VS K LE
Sbjct: 128 KHLRAVPTDEAKAFSSENGLSFIETSALDASNVESAFQTILTDIYRIVSSKSLE 181
>gi|395513434|ref|XP_003760929.1| PREDICTED: ras-related protein Rab-11B [Sarcophilus harrisii]
Length = 266
Score = 231 bits (588), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 117/203 (57%), Positives = 150/203 (73%), Gaps = 10/203 (4%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIW
Sbjct: 54 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIW 113
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI K ++++V RW++ELR HAD++I I+L+GNK
Sbjct: 114 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNK 173
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL---- 198
SDL +RAV ++A FAE L F E SAL+ NV+ AF +L EIY VS+K++
Sbjct: 174 SDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADRS 233
Query: 199 ----ECGNGKVD--GPPMLAGSK 215
GN VD PP G K
Sbjct: 234 AHDESPGNNVVDISVPPTTDGQK 256
>gi|224139494|ref|XP_002323139.1| predicted protein [Populus trichocarpa]
gi|222867769|gb|EEF04900.1| predicted protein [Populus trichocarpa]
Length = 224
Score = 231 bits (588), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 116/212 (54%), Positives = 151/212 (71%), Gaps = 1/212 (0%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
DY+FK+V+IGDSAVGKS +L+RF ++EF+ +SKSTIGVEFQT+ + INGK IKAQIWDTA
Sbjct: 12 DYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEIKAQIWDTA 71
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQER+RAVTSAYYRGA+GA++VYDI++RQ+FD V RW+ EL H+D ++ IL+GNKSDL
Sbjct: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSVGRWLNELHTHSDMNVVTILVGNKSDL 131
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNGKV 205
D R V + + AE QGLFF E SAL+ NV AF +++EIY +S+K +
Sbjct: 132 KDAREVPTVEGKDLAEAQGLFFMETSALDSSNVAAAFQTVVKEIYNILSRKVILSQELNK 191
Query: 206 DGPPMLAGSKIDVISG-ADLEISEMKKLSTCS 236
G P L K V+ G + E + K CS
Sbjct: 192 PGAPELGNGKTVVLQGDGNQEGNAETKKGCCS 223
>gi|149239050|ref|XP_001525401.1| GTP-binding protein YPT32/YPT11 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146450894|gb|EDK45150.1| GTP-binding protein YPT32/YPT11 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 221
Score = 231 bits (588), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 106/174 (60%), Positives = 144/174 (82%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
+Y++K+V+IGDS VGKS +LSRFT++EF +S+STIGVEF TRT+ I+GK +KAQIWDTA
Sbjct: 13 EYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRVKAQIWDTA 72
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQERYRA+TSAYYRGALGA++VYDI K +S++ V+RW++EL+ HAD++I I L+GNKSDL
Sbjct: 73 GQERYRAITSAYYRGALGALIVYDIAKTESYESVSRWLKELKEHADANIVIELVGNKSDL 132
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELE 199
+RAV ++A FA + L F+EASAL+ DNVD +F +LL+ IY +SK +L+
Sbjct: 133 DHLRAVPTDEARNFAMENNLLFTEASALSSDNVDLSFHQLLKNIYEMISKHQLD 186
>gi|315229760|gb|ADT91500.1| small monomeric GTPase [Bactrocera dorsalis]
Length = 197
Score = 231 bits (588), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 110/176 (62%), Positives = 142/176 (80%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIW
Sbjct: 2 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIW 61
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI K ++++V RW+ ELR HAD +I I+L+GNK
Sbjct: 62 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNK 121
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL 198
SDL +R+V ++A FAE GL F E SAL+ NV+TAF +L EIY VS+K++
Sbjct: 122 SDLRHLRSVPTDEARLFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQI 177
>gi|15221477|ref|NP_172128.1| Ras-related protein RABA1a [Arabidopsis thaliana]
gi|114086|sp|P28185.1|RAA1A_ARATH RecName: Full=Ras-related protein RABA1a; Short=AtRABA1a; AltName:
Full=Ras-related protein Ara-2; AltName:
Full=Ras-related protein Rab11E; Short=AtRab11E
gi|8927677|gb|AAF82168.1|AC068143_10 Contains similarity to a Rab11 GTPase (Rab11a gene) from
Lycopersicon esculentum gb|AJ245570 and is a member of
the Ras family PF|00071. ESTs gb|T46264, gb|AI099600,
gb|AA404778, gb|AI997429, gb|T88574 come from this gene
[Arabidopsis thaliana]
gi|12083264|gb|AAG48791.1|AF332428_1 putative GTP-binding protein RAB11D [Arabidopsis thaliana]
gi|217835|dbj|BAA00829.1| small GTP-binding protein [Arabidopsis thaliana]
gi|17644169|gb|AAL38782.1| putative GTP-binding protein RAB11D [Arabidopsis thaliana]
gi|20465351|gb|AAM20079.1| putative GTP-binding protein [Arabidopsis thaliana]
gi|332189861|gb|AEE27982.1| Ras-related protein RABA1a [Arabidopsis thaliana]
Length = 216
Score = 230 bits (587), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 112/214 (52%), Positives = 153/214 (71%), Gaps = 6/214 (2%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
++ DY+FK+V+IGDS VGKS +LSRFTKNEF +SKSTIGVEF T+T + GK++KAQIW
Sbjct: 8 EEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTTKVEGKVVKAQIW 67
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA+++YD+T+ +F++ ARW+ ELR H D +I ++LIGNK
Sbjct: 68 DTAGQERYRAITSAYYRGAVGALLIYDVTRHATFENAARWLRELRGHTDPNIVVMLIGNK 127
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
DL + AV E+A FAE + L+F E SAL+ NV+ AF +L +I+ VSK+ ++ G
Sbjct: 128 CDLRHLVAVKTEEAKAFAERESLYFMETSALDATNVENAFTEVLTQIHKIVSKRSVDGGG 187
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
D P G I+V S +K++ CS
Sbjct: 188 ESADLPG--KGETINVKEDG----SVLKRMGCCS 215
>gi|148701357|gb|EDL33304.1| mCG14915, isoform CRA_b [Mus musculus]
Length = 218
Score = 230 bits (587), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 116/203 (57%), Positives = 149/203 (73%), Gaps = 10/203 (4%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF T ++ ++GK IKAQIW
Sbjct: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATHSIQVDGKTIKAQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI K ++++V RW++ELR HADS+I I+L+GNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNK 125
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL---- 198
SDL +RAV ++A FAE L F E SAL+ NV+ AF +L EIY VS+K++
Sbjct: 126 SDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADRA 185
Query: 199 ----ECGNGKVD--GPPMLAGSK 215
GN VD PP G +
Sbjct: 186 AHDESPGNNVVDISVPPTTDGQR 208
>gi|388521711|gb|AFK48917.1| unknown [Lotus japonicus]
Length = 218
Score = 230 bits (587), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 107/180 (59%), Positives = 141/180 (78%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FK+V+IGDS VGKS +LSRFT+NEF +SKSTIGVEF T+++ I+GK+IKAQIW
Sbjct: 8 DEYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLNIDGKVIKAQIW 67
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYD+T+ +F+ RW++ELR H D +I ++LIGNK
Sbjct: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRSTTFETAGRWLKELRDHTDPNIVVMLIGNK 127
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
SDL + VS ED FAE + L+F E SAL NV+ AF +L +IY VSK+ +E G+
Sbjct: 128 SDLRHLVTVSTEDGKAFAEKESLYFMETSALEATNVENAFSEVLTQIYRIVSKRAVEAGD 187
>gi|308322801|gb|ADO28538.1| ras-related protein rab-11b [Ictalurus punctatus]
Length = 218
Score = 230 bits (587), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 116/203 (57%), Positives = 150/203 (73%), Gaps = 10/203 (4%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ D++FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIW
Sbjct: 6 DEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI K ++++V RW++ELR HAD++I I+L+GNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNK 125
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL---- 198
SDL +RAV ++A FAE L F E SAL+ NV+ AF +L EIY VS+K++
Sbjct: 126 SDLRHLRAVPTDEARAFAEKNNLSFIETSALDSANVEEAFKNILTEIYRIVSQKQIADRS 185
Query: 199 ----ECGNGKVD--GPPMLAGSK 215
GN VD PP G K
Sbjct: 186 AHDESPGNNVVDISVPPTTDGQK 208
>gi|116780906|gb|ABK21873.1| unknown [Picea sitchensis]
Length = 210
Score = 230 bits (587), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 116/210 (55%), Positives = 157/210 (74%), Gaps = 7/210 (3%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
+Y+FK+VVIGDSAVGKS +LSR+ +NEF +SK+TIGVEFQT+ + I+GK +KAQIWDTA
Sbjct: 8 EYLFKIVVIGDSAVGKSNLLSRYARNEFNPNSKATIGVEFQTQVMEIDGKEVKAQIWDTA 67
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQER+RAVTSAYYRGA+GA++VYDI++R +FD+VARW+EEL+ HADS++ +L+GNKSDL
Sbjct: 68 GQERFRAVTSAYYRGAVGALIVYDISRRLTFDNVARWLEELKMHADSNVVKMLVGNKSDL 127
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNGKV 205
+R V ED + AE +GLFF E SAL+ NV AF +++EIY VSKK L + K
Sbjct: 128 EHIREVPVEDGRKLAESEGLFFIETSALDNTNVMPAFQIVVREIYNNVSKKMLNSDSYKS 187
Query: 206 DGPPMLAGSKIDVISGADLEISEMKKLSTC 235
+ L+ +++ ++ G D K S C
Sbjct: 188 E----LSLNRVKIMDGED---PPKTKYSCC 210
>gi|25012906|gb|AAN71540.1| RH21315p [Drosophila melanogaster]
Length = 214
Score = 230 bits (587), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 117/213 (54%), Positives = 155/213 (72%), Gaps = 12/213 (5%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGKS +LSRFT+NEF +S STIGVEF TR++ ++GK IKAQIW
Sbjct: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESNSTIGVEFATRSIEVDGKTIKAQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI K ++++V RW+ ELR HAD +I I+L+GNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNK 125
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
SDL +R+V ++A FAE GL F E SAL+ NV+TAF +L EIY VS+K++
Sbjct: 126 SDLRHLRSVPTDEAKLFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQIR--- 182
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLSTC 235
PP + DVI +++E ++K T
Sbjct: 183 ----DPP-----EGDVIRPSNVEPIDVKPTVTA 206
>gi|209736178|gb|ACI68958.1| Ras-related protein Rab-11B [Salmo salar]
gi|221220258|gb|ACM08790.1| Ras-related protein Rab-11B [Salmo salar]
Length = 217
Score = 230 bits (587), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 116/203 (57%), Positives = 150/203 (73%), Gaps = 10/203 (4%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ D++FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIW
Sbjct: 6 DEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI K ++++V RW++ELR HAD++I I+L+GNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNK 125
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL---- 198
SDL +RAV ++A FAE L F E SAL+ NV+ AF +L EIY VS+K++
Sbjct: 126 SDLRHLRAVPTDEARAFAEKNTLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADRS 185
Query: 199 ----ECGNGKVD--GPPMLAGSK 215
GN VD PP G K
Sbjct: 186 AHDESPGNNVVDISVPPTTDGQK 208
>gi|432855561|ref|XP_004068248.1| PREDICTED: ras-related protein Rab-11B-like [Oryzias latipes]
Length = 218
Score = 230 bits (587), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 117/203 (57%), Positives = 150/203 (73%), Gaps = 10/203 (4%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ D++FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIW
Sbjct: 6 DEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI K ++++V RW++ELR HADS+I I+L+GNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNK 125
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL---- 198
SDL +RAV ++A FAE L F E SAL+ NV+ AF +L EIY VS+K++
Sbjct: 126 SDLRHLRAVPTDEARAFAEKNTLSFIETSALDSTNVEEAFKNVLTEIYRIVSQKQIADRS 185
Query: 199 ----ECGNGKVD--GPPMLAGSK 215
GN VD PP G K
Sbjct: 186 AHDESPGNNVVDISVPPTSDGQK 208
>gi|62858189|ref|NP_001016481.1| RAB11A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|148234494|ref|NP_001087765.1| RAB11A, member RAS oncogene family [Xenopus laevis]
gi|51895840|gb|AAH81187.1| MGC84419 protein [Xenopus laevis]
gi|89272900|emb|CAJ83200.1| RAB11A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|138519937|gb|AAI35894.1| RAB11A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
Length = 216
Score = 230 bits (587), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 109/176 (61%), Positives = 141/176 (80%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIW
Sbjct: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI K ++++V RW++ELR HAD+ I I+L+GNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNKIVIMLVGNK 125
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL 198
SDL +RAV ++A FAE GL F E SAL+ NV+ AF +L EIY VS+ ++
Sbjct: 126 SDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQTQM 181
>gi|47550807|ref|NP_999935.1| RAB11B, member RAS oncogene family, a [Danio rerio]
gi|29294722|gb|AAH48889.1| RAB11B, member RAS oncogene family [Danio rerio]
gi|182890202|gb|AAI65041.1| Rab11b protein [Danio rerio]
Length = 218
Score = 230 bits (587), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 116/203 (57%), Positives = 150/203 (73%), Gaps = 10/203 (4%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+F+VV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIW
Sbjct: 6 DEYDYLFRVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI K ++++V RW++ELR HAD++I I+L+GNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNK 125
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL---- 198
SDL +RAV ++A FAE L F E SAL+ NV+ AF +L EIY VS+K++
Sbjct: 126 SDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQMVDRP 185
Query: 199 ----ECGNGKVD--GPPMLAGSK 215
GN VD PP G K
Sbjct: 186 GHDESPGNNVVDISVPPTTDGLK 208
>gi|348504744|ref|XP_003439921.1| PREDICTED: ras-related protein Rab-11B-like [Oreochromis niloticus]
Length = 218
Score = 230 bits (587), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 116/203 (57%), Positives = 150/203 (73%), Gaps = 10/203 (4%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ D++FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIW
Sbjct: 6 DEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI K ++++V RW++ELR HAD++I I+L+GNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNK 125
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL---- 198
SDL +RAV ++A FAE L F E SAL+ NV+ AF +L EIY VS+K++
Sbjct: 126 SDLRHLRAVPTDEARAFAEKNTLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADRS 185
Query: 199 ----ECGNGKVD--GPPMLAGSK 215
GN VD PP G K
Sbjct: 186 AHDESPGNNVVDISVPPTTDGQK 208
>gi|390598603|gb|EIN08001.1| GTPase [Punctularia strigosozonata HHB-11173 SS5]
Length = 213
Score = 230 bits (587), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 108/183 (59%), Positives = 143/183 (78%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
DY+FK+V+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIWDTA
Sbjct: 8 DYLFKIVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTIKAQIWDTA 67
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQERYRA+T+AYYRGA+GA++VYDITK S+ +V RW++ELR HAD++I I+L+GNKSDL
Sbjct: 68 GQERYRAITAAYYRGAVGALLVYDITKHGSYTNVTRWLKELRDHADANIVIMLVGNKSDL 127
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNGKV 205
+RAV ++A F+ + GL F E SAL+ NV++AF L +IY VS++ LE +
Sbjct: 128 KHLRAVPTDEAKAFSTENGLSFIETSALDATNVESAFQTTLTDIYRIVSRQTLEQNADPI 187
Query: 206 DGP 208
P
Sbjct: 188 KPP 190
>gi|184186123|ref|NP_001116984.1| rab11 GTPase homolog SUrab11p [Strongylocentrotus purpuratus]
Length = 217
Score = 230 bits (587), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 110/186 (59%), Positives = 144/186 (77%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++ K IKAQIW
Sbjct: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDNKTIKAQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI K ++++V RW++ELR HAD++I I+L+GNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNK 125
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
SDL +RAV +++ FAE L F E SAL+ NV+ AF ++L EIY VS+K + G
Sbjct: 126 SDLRHLRAVPTDESKVFAERNTLSFIETSALDSTNVEQAFVQILTEIYKIVSQKNIRDGG 185
Query: 203 GKVDGP 208
D P
Sbjct: 186 NGEDSP 191
>gi|148236881|ref|NP_001088852.1| RAB11B, member RAS oncogene family, gene 2 [Xenopus laevis]
gi|56540960|gb|AAH87498.1| LOC496163 protein [Xenopus laevis]
Length = 218
Score = 230 bits (586), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 114/213 (53%), Positives = 153/213 (71%), Gaps = 3/213 (1%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIW
Sbjct: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI K ++++V RW++ELR HAD++I I+L+GNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNK 125
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
SDL +RAV ++A FAE L F E SAL+ NV+ +F +L EIY VS+K++
Sbjct: 126 SDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEESFKNILTEIYRIVSQKQMADRA 185
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLSTC 235
D P + +D+ ++ KL C
Sbjct: 186 AHEDSP---GNNVVDISVTPTMDGQRSVKLQCC 215
>gi|388504946|gb|AFK40539.1| unknown [Lotus japonicus]
Length = 218
Score = 230 bits (586), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 110/196 (56%), Positives = 145/196 (73%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FK+V+IGDS VGKS +LSRFT+NEF +SKSTIGVEF T+++ I+GK+IKAQIW
Sbjct: 8 DEYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFVTKSLNIDGKVIKAQIW 67
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYD+T+ +F+ RW++ELR H D +I ++LIGNK
Sbjct: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRSTTFETAGRWLKELRDHTDPNIVVMLIGNK 127
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
SDL + VS ED FAE + L+F E SAL NV+ AF +L +IY VSK+ +E G+
Sbjct: 128 SDLRHLVTVSTEDGKAFAEKESLYFMETSALEATNVENAFSEVLTQIYRIVSKRAVEAGD 187
Query: 203 GKVDGPPMLAGSKIDV 218
G I+V
Sbjct: 188 RASTSVAPSQGQTINV 203
>gi|254567101|ref|XP_002490661.1| GTPase of the Ypt/Rab family, very similar to Ypt31p [Komagataella
pastoris GS115]
gi|238030457|emb|CAY68381.1| GTPase of the Ypt/Rab family, very similar to Ypt31p [Komagataella
pastoris GS115]
gi|328351047|emb|CCA37447.1| GTP-binding protein YPT32/YPT11 [Komagataella pastoris CBS 7435]
Length = 220
Score = 230 bits (586), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 114/231 (49%), Positives = 164/231 (70%), Gaps = 11/231 (4%)
Query: 5 MSGDATDHRHQQQENMIPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVE 64
MS A D+ + + Y+FK+V++G+S+VGKS +LSRFT++EF +SK+TIGVE
Sbjct: 1 MSNSAEDYSYDYE---------YLFKIVLVGESSVGKSNLLSRFTRDEFNIESKTTIGVE 51
Query: 65 FQTRTVTINGKIIKAQIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVE 124
F TRT+ ++GK IKAQIWDTAGQERYRAVT+AYYRGA+GA++VYDI+ S++ +RW+
Sbjct: 52 FATRTIEVDGKRIKAQIWDTAGQERYRAVTAAYYRGAVGALLVYDISNSSSYEGASRWLS 111
Query: 125 ELRAHADSSIRIILIGNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFR 184
EL+ HAD++I + L+GNKSDL +RAV ++A FA ++GL F+EASALN +NV+ AF +
Sbjct: 112 ELKDHADANIVVELVGNKSDLNHLRAVPTDEAKSFATEKGLLFTEASALNSENVELAFQQ 171
Query: 185 LLQEIYGAVSKKELECGNGKVDGPPMLAGSKIDVISGADLEISEMKKLSTC 235
L++ IY VSK + + + D P+ G I + + S++KK S C
Sbjct: 172 LIKAIYDMVSKHQFDMNDYGNDNKPITGGQTITLTPTP--KDSKIKKDSCC 220
>gi|392567720|gb|EIW60895.1| GTPase [Trametes versicolor FP-101664 SS1]
Length = 212
Score = 230 bits (586), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 108/174 (62%), Positives = 141/174 (81%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
DY+FKVV+IGDS VGKS +LSRFT+NEF ++KSTIGVEF TR++ ++GK +KAQIWDTA
Sbjct: 8 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLETKSTIGVEFATRSINVDGKTLKAQIWDTA 67
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQERYRA+T+AYYRGA+GA++VYDI+K ++ +V RW++ELR HADS+I I+L+GNKSDL
Sbjct: 68 GQERYRAITAAYYRGAVGALLVYDISKHATYVNVTRWLKELRDHADSNIVIMLVGNKSDL 127
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELE 199
+RAV E+A FA + GL F E SAL+ NV++AF +L +IY VS K LE
Sbjct: 128 KHLRAVPTEEAKAFAAENGLSFIETSALDASNVESAFQTILTDIYRIVSSKSLE 181
>gi|5714658|gb|AAD48018.1| Rab GTP-binding protein Rab11a [Gossypium hirsutum]
Length = 224
Score = 230 bits (586), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 109/191 (57%), Positives = 147/191 (76%), Gaps = 5/191 (2%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
DY+FK+V++GDSAVGKS +L+RF +NEF+ +SKSTIGVEFQT+ + INGK +KAQIWDTA
Sbjct: 12 DYLFKIVLVGDSAVGKSNLLARFARNEFYPNSKSTIGVEFQTQKLDINGKEVKAQIWDTA 71
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQER+RAVTSAYYRGA+GA++VYDI++RQ+FD + RW+ EL+ H+D ++ IL+GNKSDL
Sbjct: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELQTHSDMNVVTILVGNKSDL 131
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKK-----ELEC 200
D R VS + AE QGLFF E SAL+ NV AF +++EIY +S+K EL+
Sbjct: 132 RDAREVSTAEGKALAEAQGLFFMETSALDSSNVAAAFQTVVKEIYNILSRKVMMSHELKK 191
Query: 201 GNGKVDGPPML 211
+ +DG ++
Sbjct: 192 QDAPLDGKTVV 202
>gi|52345666|ref|NP_001004880.1| RAB11B, member RAS oncogene family, gene 2 [Xenopus (Silurana)
tropicalis]
gi|49671143|gb|AAH75268.1| RAB11B, member RAS oncogene family, gene 2 [Xenopus (Silurana)
tropicalis]
Length = 218
Score = 230 bits (586), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 114/213 (53%), Positives = 153/213 (71%), Gaps = 3/213 (1%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIW
Sbjct: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI K ++++V RW++ELR HAD++I I+L+GNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNK 125
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
SDL +RAV ++A FAE L F E SAL+ NV+ +F +L EIY VS+K++
Sbjct: 126 SDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEESFKNILTEIYRIVSQKQMADRA 185
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLSTC 235
D P + +D+ ++ KL C
Sbjct: 186 AHEDSP---GNNVVDISVTPTMDGQRSIKLQCC 215
>gi|357121819|ref|XP_003562615.1| PREDICTED: ras-related protein RABA5a-like [Brachypodium
distachyon]
Length = 223
Score = 230 bits (586), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 111/194 (57%), Positives = 144/194 (74%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
DY+FK+V++GDS+VGKS +L+RF +NEFF +SKSTIGVEFQT+ + I+GK IKAQIWDTA
Sbjct: 12 DYLFKIVLLGDSSVGKSNLLARFARNEFFPNSKSTIGVEFQTQKLVIDGKEIKAQIWDTA 71
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQER+RAVTSAYYRGA+GA++VYDIT+RQ+FD V RW+ EL H+D ++ ILIGNK+DL
Sbjct: 72 GQERFRAVTSAYYRGAVGALLVYDITRRQTFDSVGRWLNELHTHSDMNVVTILIGNKTDL 131
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNGKV 205
R VS + AE QGLFF E SAL+ NV AF +++EIY +S+K +C K
Sbjct: 132 KHAREVSTAEGKALAEAQGLFFMETSALDSSNVKAAFQTVVKEIYSILSRKVFQCQEQKR 191
Query: 206 DGPPMLAGSKIDVI 219
L+ K V+
Sbjct: 192 SDLQSLSNGKAVVL 205
>gi|348500484|ref|XP_003437803.1| PREDICTED: ras-related protein Rab-11B-like [Oreochromis niloticus]
gi|410924493|ref|XP_003975716.1| PREDICTED: ras-related protein Rab-11B-like [Takifugu rubripes]
Length = 218
Score = 230 bits (586), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 115/203 (56%), Positives = 150/203 (73%), Gaps = 10/203 (4%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ D++FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIW
Sbjct: 6 DEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI K ++++V RW++ELR HAD++I I+L+GNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNK 125
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL---- 198
SDL +RAV ++A FAE L F E SAL+ NV+ AF +L EIY VS+K++
Sbjct: 126 SDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIAERS 185
Query: 199 ----ECGNGKVD--GPPMLAGSK 215
GN VD PP G +
Sbjct: 186 AHDESPGNNVVDISVPPTTDGQR 208
>gi|255070867|ref|XP_002507515.1| small GTPase from the rab subfamily [Micromonas sp. RCC299]
gi|226522790|gb|ACO68773.1| small GTPase from the rab subfamily [Micromonas sp. RCC299]
Length = 217
Score = 230 bits (586), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 115/193 (59%), Positives = 145/193 (75%), Gaps = 4/193 (2%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRT--VTINGKIIKAQ 80
D DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR V + GK +KAQ
Sbjct: 6 DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCSESKSTIGVEFATRCIEVCLEGKTVKAQ 65
Query: 81 IWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIG 140
IWDTAGQERYRA+TSAYYRGA+GA++VYDITK +S+D+V +W++ELR HADS+I I L+G
Sbjct: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDITKSESYDNVQKWLKELRDHADSNIVITLVG 125
Query: 141 NKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELEC 200
NK+DL +R+V AE A EF+ +GL F E SA NVD AF + L ++Y +SKK C
Sbjct: 126 NKTDLKHLRSVQAESAAEFSSIEGLSFVETSACESTNVDVAFKKNLTDVYHIISKK--SC 183
Query: 201 GNGKVDGPPMLAG 213
+ +VD AG
Sbjct: 184 SSAEVDDKNGGAG 196
>gi|328717635|ref|XP_003246264.1| PREDICTED: ras-related protein Rab-11A-like isoform 2
[Acyrthosiphon pisum]
Length = 223
Score = 229 bits (585), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 109/181 (60%), Positives = 144/181 (79%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
++ DY+FKVV+IGDS VGKS +L+RFT+NEF +SKSTIGVEF TR++ +N KIIKAQIW
Sbjct: 6 EEYDYLFKVVLIGDSGVGKSNLLARFTRNEFNLESKSTIGVEFATRSIKVNKKIIKAQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI K+ ++ +V RW+ ELR HAD +I I+L+GNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKQLTYQNVERWLSELRDHADQNIVIMLVGNK 125
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
SDL +RAV A++A FAE L F E SAL+ NV+TAF +L EI+ VS ++++ +
Sbjct: 126 SDLRHLRAVPADEATAFAEANNLSFIETSALDSTNVETAFENILTEIHRKVSARQMDSMD 185
Query: 203 G 203
G
Sbjct: 186 G 186
>gi|308323189|gb|ADO28731.1| ras-related protein rab-11b [Ictalurus punctatus]
Length = 218
Score = 229 bits (585), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 116/203 (57%), Positives = 149/203 (73%), Gaps = 10/203 (4%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIW
Sbjct: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI K ++++V RW++ELR HAD++I I+L+GNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNK 125
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL---- 198
SDL +RAV ++A FAE L F E SAL+ NV+ AF +L EIY V +K++
Sbjct: 126 SDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVPQKQIADRS 185
Query: 199 ----ECGNGKVD--GPPMLAGSK 215
GN VD PP G K
Sbjct: 186 AHDESPGNNVVDISVPPTTDGLK 208
>gi|357134125|ref|XP_003568668.1| PREDICTED: ras-related protein RGP2-like isoform 1 [Brachypodium
distachyon]
gi|357134127|ref|XP_003568669.1| PREDICTED: ras-related protein RGP2-like isoform 2 [Brachypodium
distachyon]
Length = 217
Score = 229 bits (585), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 108/168 (64%), Positives = 136/168 (80%)
Query: 27 YVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTAG 86
Y+FK+V+IGDS VGKS ILSRFT+N F DSKSTIGVEF T+++ + GK IKAQIWDTAG
Sbjct: 11 YLFKMVLIGDSGVGKSNILSRFTRNHFSLDSKSTIGVEFATKSLQMEGKTIKAQIWDTAG 70
Query: 87 QERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDLV 146
QERYRA+TSAYYRGA+GA++VYDITKRQSF++V RW+ ELR HADSSI I+++GNKSDL
Sbjct: 71 QERYRAITSAYYRGAVGALLVYDITKRQSFENVNRWLRELRDHADSSIVIMMVGNKSDLT 130
Query: 147 DMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVS 194
+R+VS + AE +GLFF E SA+ NV+ AF ++ E+YG V+
Sbjct: 131 HLRSVSEDQGKALAEKEGLFFLETSAMEAVNVEEAFQTIIAEVYGIVN 178
>gi|297848916|ref|XP_002892339.1| hypothetical protein ARALYDRAFT_887842 [Arabidopsis lyrata subsp.
lyrata]
gi|297338181|gb|EFH68598.1| hypothetical protein ARALYDRAFT_887842 [Arabidopsis lyrata subsp.
lyrata]
Length = 216
Score = 229 bits (585), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 111/214 (51%), Positives = 154/214 (71%), Gaps = 6/214 (2%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
++ DY+FK+V+IGDS VGKS +LSRFTKNEF +SKSTIGVEF T+T + GK++KAQIW
Sbjct: 8 EEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTTKVEGKVVKAQIW 67
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA+++YD+T+ +F++ ARW+ ELR H D +I ++LIGNK
Sbjct: 68 DTAGQERYRAITSAYYRGAVGALLIYDVTRHATFENAARWLRELRGHTDPNIVVMLIGNK 127
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
DL + AV E+A FAE + L+F E SAL+ NV++AF +L +I+ VSK+ ++ G
Sbjct: 128 CDLRHLVAVKTEEAKAFAERESLYFMETSALDATNVESAFTEVLSQIHKIVSKRSVDGGG 187
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
+ P G I+V S +K++ CS
Sbjct: 188 DSTELPG--KGETINVKEDG----SVLKRMGCCS 215
>gi|156838761|ref|XP_001643080.1| hypothetical protein Kpol_423p12 [Vanderwaltozyma polyspora DSM
70294]
gi|156113672|gb|EDO15222.1| hypothetical protein Kpol_423p12 [Vanderwaltozyma polyspora DSM
70294]
Length = 220
Score = 229 bits (585), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 113/216 (52%), Positives = 155/216 (71%), Gaps = 11/216 (5%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
DY+FK+V+IGDS VGKS +LSRFT +EF +SKSTIGVEF TRT+ ++GK IKAQIWDTA
Sbjct: 11 DYLFKIVLIGDSGVGKSNLLSRFTTDEFHLESKSTIGVEFATRTIDVDGKKIKAQIWDTA 70
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQERYRA+TSAYYRGA+GA++VYDI+K+ S+++ W+ ELR +AD ++ + LIGNKSDL
Sbjct: 71 GQERYRAITSAYYRGAVGALIVYDISKQSSYENCNHWLAELRENADDNVAVGLIGNKSDL 130
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECG---- 201
+RAV ++A +FA++ L F+E SALN +NVD AF L+ IY +SK +++ G
Sbjct: 131 SHLRAVPTDEAKKFAQENQLLFTETSALNSENVDQAFRELITSIYQMISKHQVDLGVDNN 190
Query: 202 NGKVDGPPMLAGSKIDVISGADLEISEMKKLSTCSC 237
N ++ P G I + + E KK S+ +C
Sbjct: 191 NNTLNAP---KGPTISLTPAPN----EKKKSSSNNC 219
>gi|167537606|ref|XP_001750471.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771011|gb|EDQ84685.1| predicted protein [Monosiga brevicollis MX1]
Length = 208
Score = 229 bits (585), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 108/176 (61%), Positives = 142/176 (80%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ D++FK+V+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ + K IKAQIW
Sbjct: 5 DEYDFLFKIVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIKVENKTIKAQIW 64
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI K ++++V RW++ELR HADS+I I+L+GNK
Sbjct: 65 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNK 124
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL 198
SDL +RAV E+A +FAE+ L F E SAL +NVD AF +L +IY VS+K++
Sbjct: 125 SDLKHLRAVPTEEAQKFAEENDLSFIETSALEAENVDDAFTTILTKIYHIVSQKQV 180
>gi|289370|gb|AAA68983.1| small GTP-binding protein [Brassica napus]
Length = 219
Score = 229 bits (585), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 106/173 (61%), Positives = 142/173 (82%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
+Y+FK+V+IGDSAVGKS +LSR+ +NEF SK+TIGVEFQT+++ I GK +KAQIWDTA
Sbjct: 10 EYLFKIVIIGDSAVGKSNLLSRYARNEFNAHSKATIGVEFQTQSMEIEGKDVKAQIWDTA 69
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQER+RAVTSAYYRGA+GA+VVYDI++R +F+ VARW++EL+ H+D+++ +L+GNK DL
Sbjct: 70 GQERFRAVTSAYYRGAVGALVVYDISRRSTFESVARWLDELKTHSDTTVARMLVGNKCDL 129
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL 198
+MRAVS E+ AE QGLFF E SALN NV TAF ++++IY S+K+L
Sbjct: 130 DNMRAVSVEEGKALAETQGLFFMETSALNSTNVKTAFEMVIRDIYANFSRKQL 182
>gi|261194555|ref|XP_002623682.1| Rab1a [Ajellomyces dermatitidis SLH14081]
gi|239588220|gb|EEQ70863.1| Rab1a [Ajellomyces dermatitidis SLH14081]
gi|239613500|gb|EEQ90487.1| Rab1a [Ajellomyces dermatitidis ER-3]
Length = 210
Score = 229 bits (585), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 113/191 (59%), Positives = 142/191 (74%), Gaps = 2/191 (1%)
Query: 20 MIPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKA 79
M D+ D++FKVV+IGDS VGKS +LSRFT+NEF DSKSTIGVEF TR++ ++GK IKA
Sbjct: 1 MANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDGKTIKA 60
Query: 80 QIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILI 139
QIWDTAGQERYRA+TSAYYRGA+GA++VYD TK Q+F + RW++ELR HAD +I I+L+
Sbjct: 61 QIWDTAGQERYRAITSAYYRGAVGALLVYDTTKEQTFANCERWLKELREHADKNIVIMLV 120
Query: 140 GNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELE 199
GNK D +RA+ + EFAE + L F E SAL+ NV+ AF +L EIY VS K LE
Sbjct: 121 GNKIDQKHVRAIKTDQGAEFAETRKLSFIETSALDATNVELAFQNILTEIYRIVSSKALE 180
Query: 200 CGNGKVDGPPM 210
NG P+
Sbjct: 181 --NGTSGQNPL 189
>gi|1370154|emb|CAA98183.1| RAB11G [Lotus japonicus]
Length = 219
Score = 229 bits (585), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 105/173 (60%), Positives = 142/173 (82%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
+Y+FK+V+IGDSAVGKS +LSR+ +NEF SK+TIGVEFQT+++ I+ K +KAQIWDTA
Sbjct: 11 EYLFKIVIIGDSAVGKSNLLSRYARNEFNMHSKATIGVEFQTQSLEIDSKEVKAQIWDTA 70
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQER+RAVTSAYYRGA+GA++VYDIT+R +FD V+RW++EL+ H D+++ ++L+GNK DL
Sbjct: 71 GQERFRAVTSAYYRGAVGALIVYDITRRTTFDSVSRWLDELKTHCDTTVAMMLVGNKCDL 130
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL 198
++RAVS E+ AE QGLFF E SAL+ NV TAF +++EIY VS+K L
Sbjct: 131 ENIRAVSIEEGKSLAEAQGLFFMETSALDSTNVRTAFEMVIREIYNNVSRKVL 183
>gi|397569796|gb|EJK46971.1| hypothetical protein THAOC_34340 [Thalassiosira oceanica]
Length = 214
Score = 229 bits (585), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 108/196 (55%), Positives = 149/196 (76%), Gaps = 1/196 (0%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
++ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF T+++ GK IKAQIW
Sbjct: 7 EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIQTEGKTIKAQIW 66
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI+K +F++V RW++ELR HA+++I ++L+GNK
Sbjct: 67 DTAGQERYRAITSAYYRGAVGALLVYDISKHSTFENVERWLKELRDHAEANIVVMLVGNK 126
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
SDL +RAV ++A+ F+E L F E SAL+ VDT+F R+L EIY +S++ +
Sbjct: 127 SDLRHLRAVETDEAMAFSEQHNLAFIETSALDASGVDTSFQRILTEIYRLMSRRNMAAEE 186
Query: 203 GKVDGPPMLAGSKIDV 218
G + P + G I +
Sbjct: 187 GG-NQPQLSTGQTISL 201
>gi|385303217|gb|EIF47306.1| gtp-binding protein ypt32 ypt11 [Dekkera bruxellensis AWRI1499]
Length = 220
Score = 229 bits (584), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 105/174 (60%), Positives = 143/174 (82%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
+Y+FK+V+IGDS+VGK+ +LSRFT++EF DS++TIGVEF TRT+ INGK IKAQIWDTA
Sbjct: 13 EYLFKIVLIGDSSVGKTNLLSRFTRDEFNPDSRATIGVEFATRTLEINGKRIKAQIWDTA 72
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQERYRA+T+AYYRGA+GA+VVYDI+ S++ V+RW++E++ HAD++I I L+GNKSDL
Sbjct: 73 GQERYRAITAAYYRGAVGALVVYDISNSDSYESVSRWLKEMKEHADANIVIALVGNKSDL 132
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELE 199
+RAV E+A FA + L F+EASALN DNV+ F +L++ IY VSK++ +
Sbjct: 133 EHLRAVPTEEARNFAAEHNLLFTEASALNADNVEFTFHQLIKSIYDMVSKRKFD 186
>gi|146414846|ref|XP_001483393.1| hypothetical protein PGUG_04122 [Meyerozyma guilliermondii ATCC
6260]
Length = 218
Score = 229 bits (584), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 108/188 (57%), Positives = 148/188 (78%), Gaps = 3/188 (1%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
+Y++K+V+IGD VGKS +LSRFT++EF +S+STIGVEF TRT+ I+G+ +KAQIWDTA
Sbjct: 13 EYLYKIVLIGDLGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGRRVKAQIWDTA 72
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQERYRA+TSAYYRGA+GA++VYDI K +S++ V+RW++EL+ HAD++I I L+GNKSDL
Sbjct: 73 GQERYRAITSAYYRGAVGALIVYDILKTESYESVSRWLKELKEHADTNIVIELVGNKSDL 132
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELEC---GN 202
+RAV E+A FA + L F+EASAL+ DNVD +F +LL+ IY +SK +L+ G
Sbjct: 133 DHLRAVPTEEAKLFANENSLLFTEASALSSDNVDLSFHQLLKNIYEMISKHQLDTNDQGA 192
Query: 203 GKVDGPPM 210
K GP +
Sbjct: 193 QKPSGPTI 200
>gi|410921192|ref|XP_003974067.1| PREDICTED: ras-related protein Rab-11B-like [Takifugu rubripes]
gi|47216650|emb|CAG04848.1| unnamed protein product [Tetraodon nigroviridis]
Length = 216
Score = 229 bits (584), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 116/203 (57%), Positives = 150/203 (73%), Gaps = 10/203 (4%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ D++FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIW
Sbjct: 6 DEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI K ++++V RW++ELR HAD++I I+L+GNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNK 125
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL---- 198
SDL +RAV ++A FAE L F E SAL+ NV+ AF +L EIY VS+K++
Sbjct: 126 SDLRHLRAVPTDEARVFAEKNTLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADRS 185
Query: 199 ----ECGNGKVD--GPPMLAGSK 215
GN VD PP G K
Sbjct: 186 AHDESPGNNVVDISVPPTTDGQK 208
>gi|357135860|ref|XP_003569526.1| PREDICTED: ras-related protein RABA1f-like [Brachypodium
distachyon]
Length = 219
Score = 229 bits (584), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 115/215 (53%), Positives = 154/215 (71%), Gaps = 4/215 (1%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
++ DY+FKVV+IGDS VGKS +LSRF ++EF D++STIGVEF T+TV ++GK++KAQIW
Sbjct: 9 EEYDYLFKVVLIGDSGVGKSNLLSRFARDEFSLDTRSTIGVEFATKTVQVDGKLVKAQIW 68
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA+VVYD+T+ +F++ RW+ ELR H D++I ++L+GNK
Sbjct: 69 DTAGQERYRAITSAYYRGAVGALVVYDVTRHITFENAERWLAELRDHTDANIVVMLVGNK 128
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
+DL +RAV E+A FAE F E SAL NV+ AF +L EIY VSKK L+ G+
Sbjct: 129 ADLRHLRAVPPEEARAFAERHRTFSMETSALESTNVEGAFTEVLGEIYRVVSKKALDIGD 188
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLSTCSC 237
PP G I+V + D E+S + CS
Sbjct: 189 DPA-APPR--GKTINVGAAKD-EVSPVNTGGCCSA 219
>gi|449543390|gb|EMD34366.1| hypothetical protein CERSUDRAFT_117145 [Ceriporiopsis subvermispora
B]
Length = 212
Score = 229 bits (584), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 109/183 (59%), Positives = 141/183 (77%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK +KAQIWDTA
Sbjct: 8 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTVKAQIWDTA 67
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQERYRA+TSAYYRGA+GA++VYDI K ++ +V RW++ELR HADS+I I+L+GNKSDL
Sbjct: 68 GQERYRAITSAYYRGAVGALLVYDIAKHATYVNVTRWLKELRDHADSNIVIMLVGNKSDL 127
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNGKV 205
+RAV ++A FA + L F E SAL+ NV++AF +L +IY VS K LE +
Sbjct: 128 KHLRAVPTDEAKAFAAENALSFIETSALDASNVESAFQTILTDIYRIVSSKSLEQSADPI 187
Query: 206 DGP 208
P
Sbjct: 188 KPP 190
>gi|145342495|ref|XP_001416217.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144576442|gb|ABO94510.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 202
Score = 229 bits (584), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 106/178 (59%), Positives = 136/178 (76%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D DY+FK+V++GDS VGKS +LSRFT+NEF +SKSTIGVEF TRT+ + KIIKAQIW
Sbjct: 7 DSYDYLFKIVLVGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTIELQNKIIKAQIW 66
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYD+T ++D++ +W+ ELR HAD+SI I+L+GNK
Sbjct: 67 DTAGQERYRAITSAYYRGAVGALLVYDVTSGDTYDNIEKWLSELRDHADASIVIMLVGNK 126
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELEC 200
DL +R A A +FAE +GL F E SALN NV+ AF L +Y VSK ++ C
Sbjct: 127 CDLEHLRVTEAATAQQFAEKEGLMFIETSALNATNVEHAFIDSLGRVYDVVSKLKMAC 184
>gi|395330307|gb|EJF62691.1| ras-domain-containing protein [Dichomitus squalens LYAD-421 SS1]
Length = 212
Score = 229 bits (584), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 108/174 (62%), Positives = 140/174 (80%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
DY+FKVV+IGDS VGKS +LSRFT+NEF ++KSTIGVEF TR++ + GK +KAQIWDTA
Sbjct: 8 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNIETKSTIGVEFATRSINVEGKTLKAQIWDTA 67
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQERYRA+T+AYYRGA+GA++VYDI+K ++ +V RW++ELR HADS+I I+L+GNKSDL
Sbjct: 68 GQERYRAITAAYYRGAVGALLVYDISKHATYVNVTRWLKELRDHADSNIVIMLVGNKSDL 127
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELE 199
+RAV E+A FA + GL F E SAL+ NV++AF +L +IY VS K LE
Sbjct: 128 KHLRAVPTEEAKAFAAENGLSFIETSALDASNVESAFQTILTDIYRIVSSKSLE 181
>gi|389748791|gb|EIM89968.1| ras-domain-containing protein [Stereum hirsutum FP-91666 SS1]
Length = 212
Score = 229 bits (583), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 107/174 (61%), Positives = 141/174 (81%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
DY+FKVV+IGDS VGKS +LSRFT+NEF ++KSTIGVEF TRT++++GK +KAQIWDTA
Sbjct: 8 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLETKSTIGVEFATRTISVDGKTLKAQIWDTA 67
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQERYRA+T+AYYRGA+GA++VYDI K ++ +V RW++ELR HADS+I I+L+GNKSDL
Sbjct: 68 GQERYRAITAAYYRGAVGALLVYDIAKHATYVNVTRWLKELRDHADSNIVIMLVGNKSDL 127
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELE 199
+RAV E+A F+ + GL F E SAL+ NV++AF +L +I+ VS K LE
Sbjct: 128 KHLRAVPTEEAKAFSAENGLSFIETSALDASNVESAFQTILTDIFRIVSNKSLE 181
>gi|115439059|ref|NP_001043809.1| Os01g0667600 [Oryza sativa Japonica Group]
gi|20161585|dbj|BAB90506.1| putative GTP-binding protein Rab11b [Oryza sativa Japonica Group]
gi|113533340|dbj|BAF05723.1| Os01g0667600 [Oryza sativa Japonica Group]
gi|125527190|gb|EAY75304.1| hypothetical protein OsI_03195 [Oryza sativa Indica Group]
gi|125571510|gb|EAZ13025.1| hypothetical protein OsJ_02946 [Oryza sativa Japonica Group]
gi|215767078|dbj|BAG99306.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 224
Score = 229 bits (583), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 113/214 (52%), Positives = 155/214 (72%), Gaps = 4/214 (1%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
++ DY+FKVV+IGDS VGKS +LSRF ++EF +++STIGVEF T+TV ++ +++KAQIW
Sbjct: 14 EEYDYLFKVVLIGDSGVGKSNLLSRFARDEFSLETRSTIGVEFATKTVRVDDRLVKAQIW 73
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA+VVYD+T+R +F++ RW++ELR H D++I ++L+GNK
Sbjct: 74 DTAGQERYRAITSAYYRGAVGALVVYDVTRRITFENAERWLKELRDHTDANIVVMLVGNK 133
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
+DL +RAV AEDA FAE G F E SAL NV+ AF +L +IY VS+ L+ G+
Sbjct: 134 ADLRHLRAVPAEDARAFAEAHGTFSMETSALEATNVEGAFTEVLAQIYRVVSRNALDIGD 193
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
PP G IDV S D ++ + CS
Sbjct: 194 DPA-APPR--GRTIDV-SAKDDAVTPVNSSGCCS 223
>gi|338717415|ref|XP_001496560.3| PREDICTED: ras-related protein Rab-11A-like [Equus caballus]
Length = 346
Score = 229 bits (583), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 107/172 (62%), Positives = 139/172 (80%)
Query: 27 YVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTAG 86
+ FK+V+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIWDTAG
Sbjct: 140 HFFKIVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAG 199
Query: 87 QERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDLV 146
QERYRA+TSAYYRGA+GA++VYDI K ++++V RW++ELR HADS+I I+L+GNKSDL
Sbjct: 200 QERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLR 259
Query: 147 DMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL 198
+RAV ++A FAE GL F E SAL+ NV+ AF +L EIY VS+K++
Sbjct: 260 HLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQM 311
>gi|164662859|ref|XP_001732551.1| hypothetical protein MGL_0326 [Malassezia globosa CBS 7966]
gi|159106454|gb|EDP45337.1| hypothetical protein MGL_0326 [Malassezia globosa CBS 7966]
Length = 213
Score = 229 bits (583), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 108/174 (62%), Positives = 138/174 (79%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
DY+FKVV+IGDS GKS +LSRFT+NEF DS+STIGVEF TR++ ++GK IKAQIWDTA
Sbjct: 8 DYLFKVVLIGDSGTGKSNLLSRFTRNEFSLDSRSTIGVEFATRSINVDGKTIKAQIWDTA 67
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQERYRA+TSAYYRGA+GA++VYDI K ++ +V+RW++ELR HADS+I ++L+GNKSDL
Sbjct: 68 GQERYRAITSAYYRGAVGALLVYDIAKHSTYVNVSRWLKELRDHADSNIVVMLVGNKSDL 127
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELE 199
+RAV E+A FA + L F E SAL+ NV+ AF +L EIY VS K L+
Sbjct: 128 RHLRAVPTEEAKAFAAENNLSFIETSALDASNVEQAFQNILTEIYHIVSNKALQ 181
>gi|348527514|ref|XP_003451264.1| PREDICTED: ras-related protein Rab-11A-like [Oreochromis niloticus]
Length = 216
Score = 229 bits (583), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 110/187 (58%), Positives = 143/187 (76%), Gaps = 1/187 (0%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ + GK IKAQIW
Sbjct: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVEGKTIKAQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI K ++++ RW++EL+ HADS+I I+L+GNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENAERWLKELQDHADSNIVIMLVGNK 125
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
SDL +RAV ++A FAE GL F E SAL+ NV+ AF +L IY VS++++ G
Sbjct: 126 SDLRHLRAVPTDEAKAFAEKHGLSFLETSALDSSNVELAFQTILTAIYNIVSQRQM-SGR 184
Query: 203 GKVDGPP 209
D P
Sbjct: 185 SDSDFSP 191
>gi|302837804|ref|XP_002950461.1| RabA/Rab11 [Volvox carteri f. nagariensis]
gi|300264466|gb|EFJ48662.1| RabA/Rab11 [Volvox carteri f. nagariensis]
Length = 219
Score = 229 bits (583), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 118/200 (59%), Positives = 151/200 (75%), Gaps = 6/200 (3%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTV---TINGKIIKA 79
D DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ T++GK IKA
Sbjct: 7 DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIQAGTVDGKTIKA 66
Query: 80 QIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILI 139
QIWDTAGQERYRA+TSAYYRGA+GA++VYDITK +F++V RW++ELR HAD++I I+L+
Sbjct: 67 QIWDTAGQERYRAITSAYYRGAVGALLVYDITKSVTFENVERWLKELRDHADANIVIMLV 126
Query: 140 GNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELE 199
GNKSDL +R V E A F E +GL F E SAL+ NV+ AF ++L EIY VSKK L+
Sbjct: 127 GNKSDLKHLRDVQTEVAQAFCEREGLSFIETSALDSTNVEKAFQQILTEIYHIVSKKVLD 186
Query: 200 CGNGKVDGPPMLAGSKIDVI 219
+ + P + G + VI
Sbjct: 187 SEDNR---PKIGEGRDLIVI 203
>gi|340515772|gb|EGR46024.1| Ras-GTPase [Trichoderma reesei QM6a]
Length = 209
Score = 229 bits (583), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 115/201 (57%), Positives = 150/201 (74%), Gaps = 2/201 (0%)
Query: 31 VVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTAGQERY 90
VV+IGDS VGKS +LSRFT+NEF DSKSTIGVEF TR++ ++ K IKAQIWDTAGQERY
Sbjct: 9 VVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDTAGQERY 68
Query: 91 RAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDLVDMRA 150
RA+TSAYYRGA+GA++VYDI+K Q++++V RW++ELR HAD++I I+L+GNKSDL +RA
Sbjct: 69 RAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVGNKSDLRHLRA 128
Query: 151 VSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNGKVDGPPM 210
V ++A FA + L F E SAL+ NV+ AF +L EIY VS K L+ G+G +
Sbjct: 129 VPTDEAKAFASENHLSFIETSALDASNVELAFQNILTEIYRIVSSKALDSGDGA--QATI 186
Query: 211 LAGSKIDVISGADLEISEMKK 231
AG+ I + AD E S+ K
Sbjct: 187 GAGTNISLSKAADDEASKSGK 207
>gi|71006264|ref|XP_757798.1| hypothetical protein UM01651.1 [Ustilago maydis 521]
gi|46097199|gb|EAK82432.1| hypothetical protein UM01651.1 [Ustilago maydis 521]
Length = 213
Score = 229 bits (583), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 108/174 (62%), Positives = 139/174 (79%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
DY+FKVV+IGDS GKS +LSRFT+NEF +SKSTIGVEF TR+++++GK +KAQIWDTA
Sbjct: 8 DYLFKVVLIGDSGTGKSNLLSRFTRNEFSLESKSTIGVEFATRSISVDGKTVKAQIWDTA 67
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQERYRA+TSAYYRGA+GA++VYDI K ++ +V+RW++ELR HADS+I I+L+GNKSDL
Sbjct: 68 GQERYRAITSAYYRGAVGALLVYDIAKHPTYVNVSRWLKELRDHADSNIVIMLVGNKSDL 127
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELE 199
+RAV E+A FA + L F E SAL+ NV+ AF +L EIY VS K L+
Sbjct: 128 RHLRAVPTEEAKAFAAENNLSFIETSALDASNVEQAFQNILTEIYRIVSNKALQ 181
>gi|50980824|gb|AAT91258.1| GTPase [Paxillus involutus]
Length = 211
Score = 228 bits (582), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 107/183 (58%), Positives = 142/183 (77%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
D++FKVV+IGDS VGKS +LSRFT+NEF DSKSTIGVEF TR++ ++ K +KAQIWDTA
Sbjct: 8 DFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSINVDSKTVKAQIWDTA 67
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQERYRA+TSAYYRGA+GA++VYDI+K ++ +V RW++ELR HADS+I I+L+GNKSDL
Sbjct: 68 GQERYRAITSAYYRGAVGALLVYDISKHATYVNVTRWLKELRDHADSNIVIMLVGNKSDL 127
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNGKV 205
+RAV E+A F+ + L F E SAL+ NV++AF +L ++Y VS K LE + +
Sbjct: 128 KHLRAVPTEEAKNFSAENELSFIETSALDASNVESAFQTILTDVYRIVSTKSLEQSSDPI 187
Query: 206 DGP 208
P
Sbjct: 188 RAP 190
>gi|255644522|gb|ACU22764.1| unknown [Glycine max]
Length = 195
Score = 228 bits (582), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 108/181 (59%), Positives = 142/181 (78%), Gaps = 3/181 (1%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FK+V+IGDS VGKS +LSRFT+NEF +SKSTIGVEF T+++ I+ K+IKAQIW
Sbjct: 8 DEYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLNIDAKVIKAQIW 67
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYD+T+R +F++ ARW++ELR H D +I ++LIGNK
Sbjct: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNIVVMLIGNK 127
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL---E 199
SDL + AV ED FAE + L+F E SAL NV+ AF +L +IY VSK+ + E
Sbjct: 128 SDLRHLVAVPTEDGKSFAEKESLYFMETSALEATNVENAFTEVLSQIYRIVSKRTVARQE 187
Query: 200 C 200
C
Sbjct: 188 C 188
>gi|15238115|ref|NP_199563.1| RAB GTPase homolog A5A [Arabidopsis thaliana]
gi|75333810|sp|Q9FGK5.1|RAA5A_ARATH RecName: Full=Ras-related protein RABA5a; Short=AtRABA5a
gi|9758780|dbj|BAB09078.1| GTP-binding protein-like [Arabidopsis thaliana]
gi|28466933|gb|AAO44075.1| At5g47520 [Arabidopsis thaliana]
gi|62321645|dbj|BAD95258.1| GTP-binding protein-like [Arabidopsis thaliana]
gi|110743839|dbj|BAE99754.1| GTP-binding protein-like [Arabidopsis thaliana]
gi|332008145|gb|AED95528.1| RAB GTPase homolog A5A [Arabidopsis thaliana]
Length = 221
Score = 228 bits (582), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 116/211 (54%), Positives = 152/211 (72%), Gaps = 2/211 (0%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
DY+FK+V+IGDSAVGKS +L+RF ++EF+ +SKSTIGVEFQT+ + INGK IKAQIWDTA
Sbjct: 12 DYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEIKAQIWDTA 71
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQER+RAVTSAYYRGA+GA++VYDI++RQ+F + RW+ EL H+D ++ IL+GNKSDL
Sbjct: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFHSIGRWLNELHTHSDMNVVTILVGNKSDL 131
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNGKV 205
D+R VS + AE QGLFF E SAL+ NV AF +++EIY +S+K +
Sbjct: 132 KDLREVSTAEGKALAEAQGLFFMETSALDSSNVAAAFETVVKEIYNILSRKVMSSQELNK 191
Query: 206 DGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
P L+ K VI +D + E KK CS
Sbjct: 192 QDPASLSNGKKVVIP-SDGQ-GEFKKGGCCS 220
>gi|189194986|ref|XP_001933831.1| GTP-binding protein yptV1 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187979710|gb|EDU46336.1| GTP-binding protein yptV1 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|451995174|gb|EMD87643.1| hypothetical protein COCHEDRAFT_1159917 [Cochliobolus
heterostrophus C5]
Length = 208
Score = 228 bits (582), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 116/196 (59%), Positives = 148/196 (75%), Gaps = 3/196 (1%)
Query: 31 VVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTAGQERY 90
+V+IGDS VGKS +LSRFT+NEF DSKSTIGVEF TR++ ++ K IKAQIWDTAGQERY
Sbjct: 9 MVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDAKTIKAQIWDTAGQERY 68
Query: 91 RAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDLVDMRA 150
RA+TSAYYRGA+GA++VYDI+K Q++++V RW++ELR HADS+I I+L+GNKSDL +RA
Sbjct: 69 RAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADSNIVIMLVGNKSDLRHLRA 128
Query: 151 VSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNGKVDGPPM 210
V E+A +FA + L F E SAL+ NV+ AF +L EIY VS K L+ G G GP +
Sbjct: 129 VPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALDQGEGS--GPVL 186
Query: 211 LAGSKIDVIS-GADLE 225
K+ IS AD E
Sbjct: 187 GNDRKVLEISKSADAE 202
>gi|147784781|emb|CAN66526.1| hypothetical protein VITISV_043978 [Vitis vinifera]
Length = 215
Score = 228 bits (582), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 113/212 (53%), Positives = 161/212 (75%), Gaps = 5/212 (2%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
+Y+FKVV+IGDSAVGKS +LSR+ +NEF +SK+TIGVEFQT+++ I+GK +KAQIWDTA
Sbjct: 8 EYLFKVVIIGDSAVGKSNLLSRYARNEFNINSKATIGVEFQTQSMEIDGKEVKAQIWDTA 67
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQER+RAVTSAYYRGA+GA+VVYDI++R +FD VARW++EL+ H+++++ +L+GNKSDL
Sbjct: 68 GQERFRAVTSAYYRGAVGALVVYDISRRSTFDSVARWLDELKTHSETTVARMLVGNKSDL 127
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNGKV 205
++R VS E+ AE +GLFF E SAL+ NV AF +++EIY +S+K L + K
Sbjct: 128 ENIRDVSVEEGKSLAEAEGLFFIETSALDSTNVKKAFEIVIREIYNNISRKVLNSDSYKA 187
Query: 206 DGPPMLAGSKIDVIS-GADLEISEMKKLSTCS 236
+ L+ +++ ++S GAD + S CS
Sbjct: 188 E----LSVNRVSLVSNGADGAKQANSRYSCCS 215
>gi|393247234|gb|EJD54742.1| ras-domain-containing protein [Auricularia delicata TFB-10046 SS5]
Length = 213
Score = 228 bits (582), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 108/174 (62%), Positives = 139/174 (79%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK +KAQIWDTA
Sbjct: 8 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTVKAQIWDTA 67
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQERYRA+TSAYYRGA+GA++VYDI K ++ +V RW++ELR HADS+I I+L+GNKSDL
Sbjct: 68 GQERYRAITSAYYRGAVGALLVYDIAKHATYVNVTRWLKELRDHADSNIVIMLVGNKSDL 127
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELE 199
+RAV ++A F+ + GL F E SAL+ NV+ AF +L +IY VS K LE
Sbjct: 128 KHLRAVPTDEAKAFSTENGLSFIETSALDASNVEAAFQTILTDIYRIVSSKALE 181
>gi|47216427|emb|CAG01978.1| unnamed protein product [Tetraodon nigroviridis]
Length = 218
Score = 228 bits (582), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 114/197 (57%), Positives = 148/197 (75%), Gaps = 10/197 (5%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ D++FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIW
Sbjct: 6 DEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI K ++++V RW++ELR HAD++I I+L+GNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNK 125
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL---- 198
SDL +RAV ++A FAE L F E SAL+ NV+ AF +L EIY VS+K++
Sbjct: 126 SDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIAERS 185
Query: 199 ----ECGNGKVD--GPP 209
GN VD PP
Sbjct: 186 AHDESPGNNVVDISVPP 202
>gi|296809015|ref|XP_002844846.1| GTP-binding protein ypt3 [Arthroderma otae CBS 113480]
gi|238844329|gb|EEQ33991.1| GTP-binding protein ypt3 [Arthroderma otae CBS 113480]
Length = 212
Score = 228 bits (582), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 107/182 (58%), Positives = 142/182 (78%)
Query: 25 IDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDT 84
+ YV VV+IGDS VGKS +LSRFT+NEF DSKSTIGVEF TR++ ++ K IK+QIWDT
Sbjct: 8 VSYVVAVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKSQIWDT 67
Query: 85 AGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSD 144
AGQERYRA+TSAYYRGA+GA++VYD++K Q++++V RW++ELR HADS+I I+L+GNKSD
Sbjct: 68 AGQERYRAITSAYYRGAVGALLVYDVSKHQTYENVTRWLKELRDHADSNIVIMLVGNKSD 127
Query: 145 LVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNGK 204
L +RAV ++A +FA + L F E SAL+ NV+ AF +L EI+ VS K LE G+
Sbjct: 128 LRHLRAVPTDEAKQFASENNLSFIETSALDASNVELAFQNILTEIFRIVSSKALESGDSS 187
Query: 205 VD 206
+
Sbjct: 188 AN 189
>gi|297790909|ref|XP_002863339.1| hypothetical protein ARALYDRAFT_494220 [Arabidopsis lyrata subsp.
lyrata]
gi|297309174|gb|EFH39598.1| hypothetical protein ARALYDRAFT_494220 [Arabidopsis lyrata subsp.
lyrata]
Length = 221
Score = 228 bits (581), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 116/211 (54%), Positives = 152/211 (72%), Gaps = 2/211 (0%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
DY+FK+V+IGDSAVGKS +L+RF ++EF+ +SKSTIGVEFQT+ + INGK IKAQIWDTA
Sbjct: 12 DYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEIKAQIWDTA 71
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQER+RAVTSAYYRGA+GA++VYDI++RQ+F + RW+ EL H+D ++ IL+GNKSDL
Sbjct: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFHSIGRWLNELHTHSDMNVVTILVGNKSDL 131
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNGKV 205
D+R VS + AE QGLFF E SAL+ NV AF +++EIY +S+K +
Sbjct: 132 KDLREVSTAEGKALAEAQGLFFMETSALDSSNVAAAFETVVKEIYNILSRKVMSSQELNK 191
Query: 206 DGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
P L+ K VI +D + E KK CS
Sbjct: 192 QDPASLSNGKKVVIP-SDGQ-GESKKGGCCS 220
>gi|359478027|ref|XP_002264559.2| PREDICTED: ras-related protein RABA5c-like isoform 2 [Vitis
vinifera]
Length = 302
Score = 228 bits (581), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 113/212 (53%), Positives = 161/212 (75%), Gaps = 5/212 (2%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
+Y+FKVV+IGDSAVGKS +LSR+ +NEF +SK+TIGVEFQT+++ I+GK +KAQIWDTA
Sbjct: 95 EYLFKVVIIGDSAVGKSNLLSRYARNEFNINSKATIGVEFQTQSMEIDGKEVKAQIWDTA 154
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQER+RAVTSAYYRGA+GA+VVYDI++R +FD VARW++EL+ H+++++ +L+GNKSDL
Sbjct: 155 GQERFRAVTSAYYRGAVGALVVYDISRRSTFDSVARWLDELKTHSETTVARMLVGNKSDL 214
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNGKV 205
++R VS E+ AE +GLFF E SAL+ NV AF +++EIY +S+K L + K
Sbjct: 215 ENIRDVSVEEGKSLAEAEGLFFIETSALDSTNVKKAFEIVIREIYNNISRKVLNSDSYKA 274
Query: 206 DGPPMLAGSKIDVIS-GADLEISEMKKLSTCS 236
+ L+ +++ ++S GAD + S CS
Sbjct: 275 E----LSVNRVSLVSNGADGAKQANSRYSCCS 302
>gi|42561732|ref|NP_563750.2| RAB GTPase homolog A5E [Arabidopsis thaliana]
gi|29893534|gb|AAP06819.1| putative RAS-related protein ARA-1 [Arabidopsis thaliana]
gi|332189776|gb|AEE27897.1| RAB GTPase homolog A5E [Arabidopsis thaliana]
Length = 261
Score = 228 bits (581), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 105/173 (60%), Positives = 143/173 (82%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
+Y+FK+VVIGDSAVGKS +LSR+ +NEF +SK+TIGVEFQT+++ I GK +KAQIWDTA
Sbjct: 53 EYLFKIVVIGDSAVGKSNLLSRYARNEFSANSKATIGVEFQTQSMEIEGKEVKAQIWDTA 112
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQER+RAVTSAYYRGA+GA+VVYDIT+R +F+ V RW++EL+ H+D+++ +L+GNK DL
Sbjct: 113 GQERFRAVTSAYYRGAVGALVVYDITRRTTFESVGRWLDELKIHSDTTVARMLVGNKCDL 172
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL 198
++RAVS E+ AE++GLFF E SAL+ NV TAF ++ +IY VS+K+L
Sbjct: 173 ENIRAVSVEEGKALAEEEGLFFVETSALDSTNVKTAFEMVILDIYNNVSRKQL 225
>gi|406608029|emb|CCH40656.1| GTP-binding protein YPT31/YPT8 [Wickerhamomyces ciferrii]
Length = 218
Score = 228 bits (581), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 113/210 (53%), Positives = 157/210 (74%), Gaps = 4/210 (1%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
+Y+FK+V+IGDS VGKS +LSRFT+NEF +S+STIGVEF TRTV I+GK +KAQIWDTA
Sbjct: 12 EYLFKIVLIGDSGVGKSNLLSRFTRNEFNLESRSTIGVEFATRTVEIDGKRVKAQIWDTA 71
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQERYRA+TSAYYRGA+GA++VYDI+K +S+++V++W++EL+ +AD +I I L+GNKSDL
Sbjct: 72 GQERYRAITSAYYRGAVGALLVYDISKSESYENVSKWLKELKENADENIVIELVGNKSDL 131
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNGKV 205
+RAV ++A +F+ + L F+EASALN +NVD +F +LL+ I+ VSK + + +
Sbjct: 132 DHLRAVPTDEAKQFSVENQLLFTEASALNAENVDLSFQQLLKSIHDMVSKHQFDMTD--Y 189
Query: 206 DGPPMLAGSKIDVISGADLEISEMKKLSTC 235
GP G I + E S+ K S C
Sbjct: 190 SGPKPSGGPTISLTPTPGNEQSKNK--SNC 217
>gi|41056251|ref|NP_956417.1| RAB11a, member RAS oncogene family, like [Danio rerio]
gi|32766639|gb|AAH55141.1| Zgc:63565 [Danio rerio]
Length = 216
Score = 228 bits (581), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 107/176 (60%), Positives = 141/176 (80%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ + GK +KAQIW
Sbjct: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIHVEGKTVKAQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI K ++++ RW++EL+ HADS+I I+L+GNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENAERWLKELQDHADSNIVIMLVGNK 125
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL 198
SDL +RAV ++A FAE GL F E SAL+ NV+ AF +L EIY VS++++
Sbjct: 126 SDLRHLRAVPMDEAKAFAEKHGLSFLETSALDSSNVELAFQTILTEIYRIVSQRQM 181
>gi|432910562|ref|XP_004078415.1| PREDICTED: ras-related protein Rab-11A-like [Oryzias latipes]
Length = 216
Score = 228 bits (580), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 108/184 (58%), Positives = 144/184 (78%), Gaps = 3/184 (1%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ + GK +KAQIW
Sbjct: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVEGKTVKAQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI K ++++ RW++EL+ HADS+I I+L+GNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENAERWLKELQDHADSNIVIMLVGNK 125
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
SDL +RAV ++A FAE GL F E SAL+ NV+ AF +L IY VS++++ +
Sbjct: 126 SDLRHLRAVPTDEARAFAEKHGLSFLETSALDSSNVELAFQTILTAIYNIVSQRQM---S 182
Query: 203 GKVD 206
G+ D
Sbjct: 183 GRTD 186
>gi|217070948|gb|ACJ83834.1| unknown [Medicago truncatula]
Length = 229
Score = 228 bits (580), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 111/224 (49%), Positives = 161/224 (71%), Gaps = 4/224 (1%)
Query: 15 QQQENMIPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTING 74
Q Q ++ + IDY+FKVV+IGDS VGKSQ+L+RF +NEF SK+TIGVEF T+TV ++
Sbjct: 3 QFQGDLDHEGIDYMFKVVMIGDSGVGKSQLLNRFVRNEFHLKSKATIGVEFLTKTVLMDH 62
Query: 75 KIIKAQIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSI 134
K++KAQIWDTAGQERY+A+T+AYYRGA GA++ YDITKR +F+H+ +W++EL HAD +I
Sbjct: 63 KLVKAQIWDTAGQERYQAITTAYYRGATGALLTYDITKRHTFNHIEKWLDELHNHADKNI 122
Query: 135 RIILIGNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVS 194
++L+GNKSDL +R V E+A + A+ +G FF E SAL+ +NV+ AF LL +IY +S
Sbjct: 123 VVMLVGNKSDLSSIREVPIEEAEDLAKQKGFFFIETSALDSNNVEPAFLGLLSQIYVTMS 182
Query: 195 KKELECGNGKVDGPPM---LAGSKIDVISGADLEISEMKKLSTC 235
KK + + + + G+K+ ++S + E + KK +C
Sbjct: 183 KKHITADGRERNWDKVNLEFEGTKL-LVSSQEPECQKSKKRFSC 225
>gi|242097064|ref|XP_002439022.1| hypothetical protein SORBIDRAFT_10g030070 [Sorghum bicolor]
gi|241917245|gb|EER90389.1| hypothetical protein SORBIDRAFT_10g030070 [Sorghum bicolor]
Length = 209
Score = 228 bits (580), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 121/216 (56%), Positives = 148/216 (68%), Gaps = 15/216 (6%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
DYVFK+VVIGDSAVGK+Q+L RFT++EFF DSKSTIG+EFQTRTV I +KAQIWDTA
Sbjct: 4 DYVFKIVVIGDSAVGKTQLLGRFTRDEFFLDSKSTIGIEFQTRTVDIARHRVKAQIWDTA 63
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
G YYRGALGA++VYD+T R H ARWV ELRAHAD SI ++L+GNK+DL
Sbjct: 64 GAR-------TYYRGALGAMLVYDVTSR----HAARWVTELRAHADKSIVVMLVGNKADL 112
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNGKV 205
FAE+QGLFFSEASAL+GDNV+ AF LLQEI+ VS+K LE +
Sbjct: 113 AGAVRWRQTRRPLFAEEQGLFFSEASALSGDNVERAFLTLLQEIHANVSRKRLEAAPDED 172
Query: 206 DGPPMLAGSKIDVISGAD----LEISEMKKLSTCSC 237
G + K +S AD +E S +++ S+CSC
Sbjct: 173 TGAADVLALKGTKLSLADEISIMETSALRRASSCSC 208
>gi|366993453|ref|XP_003676491.1| hypothetical protein NCAS_0E00600 [Naumovozyma castellii CBS 4309]
gi|342302358|emb|CCC70130.1| hypothetical protein NCAS_0E00600 [Naumovozyma castellii CBS 4309]
Length = 219
Score = 228 bits (580), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 112/212 (52%), Positives = 149/212 (70%), Gaps = 4/212 (1%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
DY+FK+V+IGDS VGKS +LSRFT NEF +SKSTIGVEF TRT+ + GK IKAQIWDTA
Sbjct: 11 DYLFKIVLIGDSGVGKSNLLSRFTTNEFNIESKSTIGVEFATRTIEVEGKKIKAQIWDTA 70
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQERYRA+TSAYYRGA+GA++VYDI+K ++++ W++ELR +AD ++ + LIGNKSDL
Sbjct: 71 GQERYRAITSAYYRGAVGALIVYDISKSGTYENCNHWLKELRDNADDNVAVGLIGNKSDL 130
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNGKV 205
+RAV +A FA + L F+E SALN +NVD AF L+ IY VSK +++ G+
Sbjct: 131 AHLRAVPTAEAKNFASENELLFTETSALNSENVDQAFRELITAIYQMVSKHQVDLGDSGN 190
Query: 206 DGPPMLAGSKIDVISGADLEISEMKKLSTCSC 237
+ G I + + E KK S+ +C
Sbjct: 191 NAAAAPKGPTISLTPTPN----ENKKSSSSNC 218
>gi|1707014|gb|AAC69136.1| putative GTP-binding protein [Arabidopsis thaliana]
Length = 219
Score = 228 bits (580), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 114/215 (53%), Positives = 156/215 (72%), Gaps = 5/215 (2%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRT-VTINGKIIKAQI 81
D DY+FKVV+ GDS VGKS +LSRFT+N+F DS+STIGVEF TR + ++ KI+KAQI
Sbjct: 8 DDYDYLFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRSTIGVEFATRRGIQVDDKIVKAQI 67
Query: 82 WDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGN 141
WDTAGQERYRA+TSAYYRGA+GA++VYD+T+ +F++V RW++ELR H D++ I+L+GN
Sbjct: 68 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANTVIMLVGN 127
Query: 142 KSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECG 201
K+DL +RA+S E+ +FAE + FF E SAL NV+ AF +L +IY VSKK L+ G
Sbjct: 128 KADLNHLRAISTEEVKDFAERENTFFMETSALEAINVENAFTEVLTQIYRVVSKKALDAG 187
Query: 202 NGKVDGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
+ P G I+V G+ ++S +KK C+
Sbjct: 188 DDPTTALP--KGQMINV--GSRDDVSAVKKSGCCA 218
>gi|408399192|gb|EKJ78316.1| hypothetical protein FPSE_01502 [Fusarium pseudograminearum CS3096]
Length = 212
Score = 228 bits (580), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 115/204 (56%), Positives = 149/204 (73%), Gaps = 2/204 (0%)
Query: 20 MIPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKA 79
M D+ D VV+IGDS VGKS +LSRFT+NEF DSKSTIGVEF TR++ ++ K IKA
Sbjct: 1 MANDEYDREPTVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKA 60
Query: 80 QIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILI 139
QIWDTAGQERYRA+TSAYYRGA+GA++VYDI+K Q++++V RW++ELR HAD++I I+L+
Sbjct: 61 QIWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLV 120
Query: 140 GNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELE 199
GNKSDL +RAV E+A FA + L F E SAL+ NV+ AF +L EIY VS K L+
Sbjct: 121 GNKSDLRHLRAVPTEEAKSFASENHLSFIETSALDASNVELAFQNILTEIYRIVSSKALD 180
Query: 200 CGNGKVDGPPMLAGSKIDVISGAD 223
G+ + AG+ I + AD
Sbjct: 181 SGDSA--QATIGAGTNISLSKPAD 202
>gi|345568399|gb|EGX51293.1| hypothetical protein AOL_s00054g363 [Arthrobotrys oligospora ATCC
24927]
Length = 209
Score = 228 bits (580), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 110/179 (61%), Positives = 142/179 (79%)
Query: 20 MIPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKA 79
M D+ D++FKVV+IGDS VGKS +LSRFT+NEF DSKSTIGVEF TR++ ++ K IKA
Sbjct: 1 MASDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNMDSKSTIGVEFATRSIQVDSKTIKA 60
Query: 80 QIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILI 139
QIWDTAGQERYRA+TSAYYRGA+GA++VYDI+K ++++V RW++ELR HADS+I I+L+
Sbjct: 61 QIWDTAGQERYRAITSAYYRGAVGALLVYDISKHITYENVTRWLKELRDHADSNIVIMLV 120
Query: 140 GNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL 198
GNKSDL +RAV+ ++A FA + L F E SAL+ NV+ AF +L EIY VS K L
Sbjct: 121 GNKSDLRHLRAVTTDEAKAFAAENHLSFIETSALDASNVELAFQNILTEIYRIVSSKVL 179
>gi|326503068|dbj|BAJ99159.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326506770|dbj|BAJ91426.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 223
Score = 228 bits (580), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 107/171 (62%), Positives = 137/171 (80%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
DY+FK+V++GDS+VGKS +L+RF +NEFF +SKSTIGVEFQT+ + I+GK IKAQIWDTA
Sbjct: 12 DYLFKIVLLGDSSVGKSNLLARFARNEFFPNSKSTIGVEFQTQKLVIDGKEIKAQIWDTA 71
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQER+RAVTSAYYRGA+GA++VYDIT+RQ+FD V RW+ EL AH+D ++ ILIGNK+DL
Sbjct: 72 GQERFRAVTSAYYRGAVGALLVYDITRRQTFDSVGRWLNELHAHSDMNVVTILIGNKTDL 131
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKK 196
R VS + AE QGLFF E SAL+ NV AF +++EIY +S+K
Sbjct: 132 KHAREVSPAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVKEIYSILSRK 182
>gi|255574657|ref|XP_002528238.1| protein with unknown function [Ricinus communis]
gi|223532355|gb|EEF34153.1| protein with unknown function [Ricinus communis]
Length = 223
Score = 228 bits (580), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 109/191 (57%), Positives = 143/191 (74%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
DY+FK+V+IGDSAVGKS +L+RF ++EF+ +SKSTIGVEFQT+ + INGK +KAQIWDTA
Sbjct: 12 DYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQER+RAVTSAYYRGA+GA++VYDI++RQ+FD V +W+ EL H+D ++ IL+GNKSDL
Sbjct: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSVGKWLNELHTHSDMNVVTILVGNKSDL 131
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNGKV 205
D R VS + AE Q LFF E SAL+ NV AF +++EIY +S+K + K
Sbjct: 132 KDAREVSTAEGKALAETQDLFFMETSALDSSNVTAAFQTVVREIYNILSRKVMSNEFNKQ 191
Query: 206 DGPPMLAGSKI 216
D P M G +
Sbjct: 192 DAPLMGNGKTV 202
>gi|93279476|pdb|2F9L|A Chain A, 3d Structure Of Inactive Human Rab11b Gtpase
gi|93279477|pdb|2F9M|A Chain A, 3d Structure Of Active Human Rab11b Gtpase
Length = 199
Score = 227 bits (579), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 114/194 (58%), Positives = 145/194 (74%), Gaps = 10/194 (5%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIWDTA
Sbjct: 3 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 62
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQERYR +TSAYYRGA+GA++VYDI K ++++V RW++ELR HADS+I I+L+GNKSDL
Sbjct: 63 GQERYRRITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDL 122
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL------- 198
+RAV ++A FAE L F E SAL+ NV+ AF +L EIY VS+K++
Sbjct: 123 RHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADRAAHD 182
Query: 199 -ECGNGKVD--GPP 209
GN VD PP
Sbjct: 183 ESPGNNVVDISVPP 196
>gi|351722131|ref|NP_001238001.1| uncharacterized protein LOC100527312 [Glycine max]
gi|255632063|gb|ACU16384.1| unknown [Glycine max]
Length = 214
Score = 227 bits (579), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 114/214 (53%), Positives = 154/214 (71%), Gaps = 7/214 (3%)
Query: 28 VFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTAGQ 87
+FK+V++GDS VGKSQ+L+RF KNEF SK TIGVEF TRTV ++ K++KAQIWDTAGQ
Sbjct: 1 MFKIVMVGDSGVGKSQLLNRFVKNEFHMKSKPTIGVEFLTRTVVMDHKLVKAQIWDTAGQ 60
Query: 88 ERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDLVD 147
ERY+A+T+AYYRGA A++ YDITK+Q+FDHV +W++ELR H D +I ++L+GNKSDL
Sbjct: 61 ERYQAITTAYYRGATCALLAYDITKQQTFDHVEKWLDELRIHTDKNILVMLVGNKSDLSS 120
Query: 148 MRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL-----ECGN 202
+RAV E A +FA+ +GLFF E SAL+ NV++AF LL ++Y VS+K + E
Sbjct: 121 LRAVPTEVARDFAQQEGLFFLETSALDSSNVESAFIGLLSQVYRTVSRKLILVDGHESNW 180
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
KV+ L G+KI V S + K+ + CS
Sbjct: 181 DKVNLE--LEGTKIKVPSQEPECQNAKKRFNCCS 212
>gi|623584|gb|AAA74116.1| putative, partial [Nicotiana tabacum]
Length = 209
Score = 227 bits (579), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 103/173 (59%), Positives = 142/173 (82%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
+Y+FK+V+IGDSAVGKS +L+R+ +NEF SK+TIGVEFQT+T+ I+GK +KAQIWDTA
Sbjct: 2 EYLFKIVIIGDSAVGKSNLLTRYARNEFNLHSKATIGVEFQTQTLEIDGKEVKAQIWDTA 61
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQER+RAVTSAYYRGA GA+VVYDIT+R +FD + RW++EL+ H+D+++ +L+GNK DL
Sbjct: 62 GQERFRAVTSAYYRGAFGALVVYDITRRTTFDSIPRWLDELKTHSDTTVARMLVGNKCDL 121
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL 198
++RAVS E+ AE +G+FF E SAL+ NV+ AF +++EIY +VS+K L
Sbjct: 122 DNIRAVSVEEGKSLAESEGMFFMETSALDATNVNKAFDMVIREIYNSVSRKVL 174
>gi|42543202|pdb|1OIV|A Chain A, X-Ray Structure Of The Small G Protein Rab11a In Complex
With Gdp
gi|42543203|pdb|1OIV|B Chain B, X-Ray Structure Of The Small G Protein Rab11a In Complex
With Gdp
Length = 191
Score = 227 bits (579), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 108/168 (64%), Positives = 137/168 (81%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIW
Sbjct: 24 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIW 83
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI K ++++V RW++ELR HADS+I I+L+GNK
Sbjct: 84 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNK 143
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIY 190
SDL +RAV ++A FAE GL F E SAL+ NV+ AF +L EIY
Sbjct: 144 SDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIY 191
>gi|395502702|ref|XP_003755716.1| PREDICTED: ras-related protein Rab-11A [Sarcophilus harrisii]
Length = 284
Score = 227 bits (579), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 108/172 (62%), Positives = 139/172 (80%)
Query: 27 YVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTAG 86
+VF VV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIWDTAG
Sbjct: 78 FVFSVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAG 137
Query: 87 QERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDLV 146
QERYRA+TSAYYRGA+GA++VYDI K ++++V RW++ELR HADS+I I+L+GNKSDL
Sbjct: 138 QERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLR 197
Query: 147 DMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL 198
+RAV ++A FAE GL F E SAL+ NV+ AF +L EIY VS+K++
Sbjct: 198 HLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQM 249
>gi|343428333|emb|CBQ71863.1| probable GTP-binding protein Rab11 [Sporisorium reilianum SRZ2]
gi|388852902|emb|CCF53350.1| probable probable GTP-binding protein Rab11 [Ustilago hordei]
Length = 213
Score = 227 bits (578), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 107/174 (61%), Positives = 139/174 (79%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
DY+FKVV+IGDS GKS +LSRFT+NEF +SKSTIGVEF TR+++++GK +KAQIWDTA
Sbjct: 8 DYLFKVVLIGDSGTGKSNLLSRFTRNEFSLESKSTIGVEFATRSISVDGKTVKAQIWDTA 67
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQERYRA+TSAYYRGA+GA++VYDI K ++ +V+RW++ELR HADS+I I+L+GNKSDL
Sbjct: 68 GQERYRAITSAYYRGAVGALLVYDIAKHPTYVNVSRWLKELRDHADSNIVIMLVGNKSDL 127
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELE 199
+RAV ++A FA + L F E SAL+ NV+ AF +L EIY VS K L+
Sbjct: 128 RHLRAVPTDEAKAFAAENNLSFIETSALDASNVEQAFQNILTEIYRIVSNKALQ 181
>gi|5714660|gb|AAD48019.1| Rab GTP-binding protein Rab11b [Gossypium hirsutum]
Length = 224
Score = 227 bits (578), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 109/191 (57%), Positives = 145/191 (75%), Gaps = 5/191 (2%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
DY+FK+V+ GDSAVGKS +L+RF +NEF+ DSKSTIGVE QT+ + INGK +KAQIWDTA
Sbjct: 12 DYLFKIVLDGDSAVGKSNLLARFARNEFYPDSKSTIGVELQTQKLDINGKEVKAQIWDTA 71
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQER+RAVTSAYYRGA+GA++VYDI++RQ+FD + RW+ EL+ H+D ++ IL+GNKSDL
Sbjct: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELQTHSDMNVVTILVGNKSDL 131
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKK-----ELEC 200
D R VS + AE QGLFF E SAL+ NV AF +++EIY +S+K EL+
Sbjct: 132 RDAREVSTAEGKALAEAQGLFFMETSALDSSNVAAAFQTVVKEIYNILSRKVMMSHELKK 191
Query: 201 GNGKVDGPPML 211
+ +DG ++
Sbjct: 192 QDAPLDGKTVV 202
>gi|169597663|ref|XP_001792255.1| hypothetical protein SNOG_01620 [Phaeosphaeria nodorum SN15]
gi|160707568|gb|EAT91269.2| hypothetical protein SNOG_01620 [Phaeosphaeria nodorum SN15]
Length = 215
Score = 227 bits (578), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 111/184 (60%), Positives = 142/184 (77%), Gaps = 3/184 (1%)
Query: 32 VVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTAGQERYR 91
V+IGDS VGKS +LSRFT+NEF DSKSTIGVEF TR++ ++ K IKAQIWDTAGQERYR
Sbjct: 16 VLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDAKTIKAQIWDTAGQERYR 75
Query: 92 AVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDLVDMRAV 151
A+TSAYYRGA+GA++VYDI+K Q++++V RW++ELR HADS+I I+L+GNKSDL +RAV
Sbjct: 76 AITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADSNIVIMLVGNKSDLRHLRAV 135
Query: 152 SAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNGKVDGPPML 211
E+A +FA + L F E SAL+ NV+ AF +L EIY VS K L+ G G G +L
Sbjct: 136 PTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALDQGEG---GQNVL 192
Query: 212 AGSK 215
G +
Sbjct: 193 GGER 196
>gi|114085|sp|P19892.1|RAA5E_ARATH RecName: Full=Ras-related protein RABA5e; Short=AtRABA5e; AltName:
Full=Ras-related protein Ara-1; Flags: Precursor
gi|6850310|gb|AAF29387.1|AC009999_7 Strong similarity to a RAS-related protein ARA-1 from Arabidopsis
thaliana gi|114085, and is a member of the RAS PF|00071
family. EST gb|D01026 comes from this gene [Arabidopsis
thaliana]
gi|12083322|gb|AAG48820.1|AF332457_1 putative RAS-related protein ARA-1 [Arabidopsis thaliana]
gi|538283|gb|AAC13655.1| ras-related protein [Arabidopsis thaliana]
Length = 218
Score = 227 bits (578), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 105/173 (60%), Positives = 143/173 (82%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
+Y+FK+VVIGDSAVGKS +LSR+ +NEF +SK+TIGVEFQT+++ I GK +KAQIWDTA
Sbjct: 10 EYLFKIVVIGDSAVGKSNLLSRYARNEFSANSKATIGVEFQTQSMEIEGKEVKAQIWDTA 69
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQER+RAVTSAYYRGA+GA+VVYDIT+R +F+ V RW++EL+ H+D+++ +L+GNK DL
Sbjct: 70 GQERFRAVTSAYYRGAVGALVVYDITRRTTFESVGRWLDELKIHSDTTVARMLVGNKCDL 129
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL 198
++RAVS E+ AE++GLFF E SAL+ NV TAF ++ +IY VS+K+L
Sbjct: 130 ENIRAVSVEEGKALAEEEGLFFVETSALDSTNVKTAFEMVILDIYNNVSRKQL 182
>gi|89258423|gb|ABD65435.1| Rab11 [Suberites domuncula]
Length = 217
Score = 227 bits (578), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 107/173 (61%), Positives = 139/173 (80%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ D++FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIW
Sbjct: 6 DEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI K ++++V RW++ELR HADS+I I+ +GNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMAVGNK 125
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSK 195
DL +RAV E+A ++E GL F E SAL+ NV+TAF +L EIY VS+
Sbjct: 126 CDLRHLRAVPTEEAKAYSEKNGLSFIETSALDSTNVETAFQNILTEIYHIVSQ 178
>gi|308800306|ref|XP_003074934.1| Rab1 small GTPase from the Rab subfamily (IC) [Ostreococcus tauri]
gi|116061486|emb|CAL52204.1| Rab1 small GTPase from the Rab subfamily (IC) [Ostreococcus tauri]
Length = 214
Score = 227 bits (578), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 105/176 (59%), Positives = 135/176 (76%)
Query: 22 PDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQI 81
D DY+FKVV++GDS VGKS +LSRFT+NEF +SKSTIGVEF TRT+ I KIIKAQI
Sbjct: 5 ADDYDYLFKVVLVGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTIEIQNKIIKAQI 64
Query: 82 WDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGN 141
WDTAGQERYRA+TSAYYRGA+GA++VYD+T + +F +V +W+ ELR HAD++I I+L+GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDVTNKDTFGNVEKWLSELRDHADANIVIMLVGN 124
Query: 142 KSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKE 197
K DL +R + A A +FA+ + L F E SAL+ NV+TAF L +Y VSK +
Sbjct: 125 KCDLAQLRVIQAVKAQQFADTEDLIFIETSALDATNVETAFINALSNVYNVVSKNQ 180
>gi|268565079|ref|XP_002639326.1| C. briggsae CBR-RAB-11.1 protein [Caenorhabditis briggsae]
Length = 211
Score = 227 bits (578), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 107/176 (60%), Positives = 140/176 (79%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++++ GK +KAQIW
Sbjct: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSISVEGKTVKAQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI K ++++V RW++ELR HAD +I I+L+GNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHVTYENVERWLKELRDHADQNIVIMLVGNK 125
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL 198
SDL +RAV ++A +AE L F E SAL+ NV+ AF +L EIY +VS K +
Sbjct: 126 SDLRHLRAVPTDEAKIYAERNQLSFIETSALDSTNVEAAFTNILTEIYKSVSNKHV 181
>gi|410927430|ref|XP_003977150.1| PREDICTED: ras-related protein Rab-11A-like [Takifugu rubripes]
Length = 215
Score = 227 bits (578), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 109/187 (58%), Positives = 143/187 (76%), Gaps = 1/187 (0%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ + GK +KAQIW
Sbjct: 5 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIKVEGKTVKAQIW 64
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI K ++++ RW++EL+ HADS+I I+L+GNK
Sbjct: 65 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENAERWLKELQDHADSNIVIMLVGNK 124
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
SDL +RAV ++A FAE GL F E SAL+ NV+ AF +L IY VS++++ G
Sbjct: 125 SDLRHLRAVPIDEARAFAEKYGLSFLETSALDSSNVELAFHTILTAIYNIVSQRQM-SGR 183
Query: 203 GKVDGPP 209
D P
Sbjct: 184 SDSDFSP 190
>gi|255717675|ref|XP_002555118.1| KLTH0G01760p [Lachancea thermotolerans]
gi|238936502|emb|CAR24681.1| KLTH0G01760p [Lachancea thermotolerans CBS 6340]
Length = 218
Score = 227 bits (578), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 109/186 (58%), Positives = 139/186 (74%), Gaps = 3/186 (1%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
DY+FK+V+IGDS VGKS +LSRFT NEF +SKSTIGVEF TRT+ + GK IKAQIWDTA
Sbjct: 11 DYLFKIVLIGDSGVGKSNLLSRFTTNEFNMESKSTIGVEFATRTIEVEGKKIKAQIWDTA 70
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQERYRA+TSAYYRGA+GA++VYDI+K S+++ W+ ELR +AD ++ + LIGNKSDL
Sbjct: 71 GQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLTELRENADENVAVGLIGNKSDL 130
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL---ECGN 202
+RAV ++A FA++ L F+E SALN +NVD AF L+ IY VSK ++ E GN
Sbjct: 131 AHLRAVPTDEAKNFAQENQLLFTETSALNSENVDQAFRELITAIYQMVSKHQVDLNEYGN 190
Query: 203 GKVDGP 208
P
Sbjct: 191 NAGQAP 196
>gi|170596273|ref|XP_001902705.1| Ras-related protein Rab-11B [Brugia malayi]
gi|312076250|ref|XP_003140777.1| rab family protein [Loa loa]
gi|158589464|gb|EDP28446.1| Ras-related protein Rab-11B, putative [Brugia malayi]
gi|307764062|gb|EFO23296.1| Ras-like protein Rab-11B [Loa loa]
gi|402584459|gb|EJW78400.1| rab family protein [Wuchereria bancrofti]
Length = 215
Score = 226 bits (577), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 114/198 (57%), Positives = 146/198 (73%), Gaps = 3/198 (1%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ + GK +KAQIW
Sbjct: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVEGKTVKAQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI K ++++V RW++ELR HAD +I I+L+GNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHVTYENVERWLKELRDHADQNIVIMLVGNK 125
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
SDL +RAV ++A +AE L F E SAL+ NV+ AF +L EIY +VS K + N
Sbjct: 126 SDLRHLRAVPTDEAKAYAEKNQLSFIETSALDSTNVEAAFTNILTEIYKSVSVKHVGGDN 185
Query: 203 GKVDGPPMLAGSKIDVIS 220
P GS VIS
Sbjct: 186 RAAISTP---GSNGIVIS 200
>gi|256053122|ref|XP_002570055.1| rab11 [Schistosoma mansoni]
gi|350645028|emb|CCD60258.1| rab11, putative [Schistosoma mansoni]
Length = 933
Score = 226 bits (577), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 104/171 (60%), Positives = 135/171 (78%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
DK DY+FKVV+ GDS VGKS +LSRFT+NEF +SKSTIGVEF T++V I+G+ IKAQIW
Sbjct: 11 DKYDYLFKVVLTGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSVEIDGRTIKAQIW 70
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+T+AYYRGA+GA++VYDITKR++F+++ W+ ELR HA+ I I+L+GNK
Sbjct: 71 DTAGQERYRAITAAYYRGAVGALLVYDITKRETFNNLEHWLLELRGHAEPDIVIMLVGNK 130
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAV 193
DL +R + EDA +AE GLFF E SAL V+ AF+ +L+ I+ AV
Sbjct: 131 CDLRHLRTILTEDAKLWAERHGLFFMETSALESTGVENAFYSILRTIFEAV 181
>gi|8778562|gb|AAF79570.1|AC022464_28 F22G5.24 [Arabidopsis thaliana]
Length = 231
Score = 226 bits (577), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 114/197 (57%), Positives = 142/197 (72%), Gaps = 17/197 (8%)
Query: 19 NMIPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTI------ 72
N I + DY+FK+V+IGDS VGKS ILSRFT+NEF +SKSTIGVEF TRT+ +
Sbjct: 3 NRIDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVISLLSL 62
Query: 73 -----------NGKIIKAQIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVAR 121
GK +KAQIWDTAGQERYRA+TSAYYRGA+GA++VYDITKRQ+F++V R
Sbjct: 63 SLNLDNFPPDQFGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFENVLR 122
Query: 122 WVEELRAHADSSIRIILIGNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTA 181
W+ ELR HADS+I I++ GNKSDL +R+V+ ED AE +GL F E SAL N++ A
Sbjct: 123 WLRELRDHADSNIVIMMAGNKSDLNHLRSVADEDGRSLAEKEGLSFLETSALEATNIEKA 182
Query: 182 FFRLLQEIYGAVSKKEL 198
F +L EIY +SKK L
Sbjct: 183 FQTILSEIYHIISKKAL 199
>gi|427786917|gb|JAA58910.1| Putative ras-related protein rab-11a [Rhipicephalus pulchellus]
Length = 217
Score = 226 bits (577), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 113/215 (52%), Positives = 156/215 (72%), Gaps = 5/215 (2%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++ K +KAQIW
Sbjct: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDNKTVKAQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI K ++++V RW++EL+ HAD +I I+L+GNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELKDHADQNIVIMLVGNK 125
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
+DL +RAV ++A FAE L F E SAL+ NV+ AF ++L +IY VS+K++
Sbjct: 126 NDLRHLRAVPTDEAKAFAEKNKLSFIETSALDSTNVEAAFHQILTDIYHIVSQKQIR-SE 184
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLSTCSC 237
G D P I + A + ++ +K S C+C
Sbjct: 185 GDNDPSPSRDNIPITI---APTDPTDNRKKS-CAC 215
>gi|213511282|ref|NP_001134031.1| Ras-related protein Rab-11A [Salmo salar]
gi|209156222|gb|ACI34343.1| Ras-related protein Rab-11A [Salmo salar]
Length = 216
Score = 226 bits (577), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 108/187 (57%), Positives = 142/187 (75%), Gaps = 1/187 (0%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ + GK +KAQIW
Sbjct: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIHVEGKTVKAQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI K ++++ RW++EL+ HADS+I I+L+GNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENAERWLKELQDHADSNIVIMLVGNK 125
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
SDL +RAV ++A AE GL F E SAL+ NV+ AF +L IY VS++++ G
Sbjct: 126 SDLRHLRAVPMDEAKALAEKHGLSFLETSALDSSNVELAFQTILTAIYNIVSQRQM-TGR 184
Query: 203 GKVDGPP 209
D P
Sbjct: 185 SDTDFSP 191
>gi|145523367|ref|XP_001447522.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834407|emb|CAI44537.1| rab_B25 [Paramecium tetraurelia]
gi|124415033|emb|CAK80125.1| unnamed protein product [Paramecium tetraurelia]
Length = 209
Score = 226 bits (577), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 117/213 (54%), Positives = 155/213 (72%), Gaps = 9/213 (4%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D DY+FKVV+ GDS VGKS +L RFTKN+F DSK+TIGVEF TR+++I+GKIIKAQIW
Sbjct: 6 DDYDYLFKVVLSGDSGVGKSNLLLRFTKNQFNPDSKTTIGVEFATRSISISGKIIKAQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GAV+VYDIT +QSF+ V RW++E+R +AD I I++IGNK
Sbjct: 66 DTAGQERYRAITSAYYRGAIGAVLVYDITNKQSFESVERWIQEVRENADKDIVIMIIGNK 125
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
SDL +RA+ E + A+ + F EASA +G NVD AF +++Q+IY ++ K+L+
Sbjct: 126 SDLKHLRAIRTESGQDLAQMYKVAFMEASAQDGTNVDQAFTQIIQQIYQNLT-KQLQ--- 181
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLSTC 235
K D L G K+D+ ++ S KK C
Sbjct: 182 -KYDQMSHLQGEKLDL----EITTSGNKKQGCC 209
>gi|341038786|gb|EGS23778.1| putative GTP-binding protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 224
Score = 226 bits (577), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 115/191 (60%), Positives = 140/191 (73%), Gaps = 12/191 (6%)
Query: 20 MIPDKIDYVFK------------VVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQT 67
M D+ D++FK VV+IGDS VGKS +LSRFT+NEF DSKSTIGVEF T
Sbjct: 1 MANDEYDFLFKALADSWAIPSRAVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFAT 60
Query: 68 RTVTINGKIIKAQIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELR 127
R++ I+GK IKAQIWDTAGQERYRA+TSAYYRGA+GA++VYDI K SF++V+RW++ELR
Sbjct: 61 RSIQIDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIGKSSSFENVSRWLKELR 120
Query: 128 AHADSSIRIILIGNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQ 187
HADS+I I+L+GNK+D +RAVS ED FA + GL F E SAL NVD AF +L
Sbjct: 121 DHADSNIVIMLVGNKTDKRHLRAVSTEDGKAFAAEHGLSFIETSALEATNVDLAFQEILT 180
Query: 188 EIYGAVSKKEL 198
IY VS K L
Sbjct: 181 SIYQIVSSKSL 191
>gi|115473561|ref|NP_001060379.1| Os07g0634200 [Oryza sativa Japonica Group]
gi|22093831|dbj|BAC07118.1| putative Rab GTP-binding protein Rab11a [Oryza sativa Japonica
Group]
gi|113611915|dbj|BAF22293.1| Os07g0634200 [Oryza sativa Japonica Group]
gi|215734858|dbj|BAG95580.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218200085|gb|EEC82512.1| hypothetical protein OsI_26999 [Oryza sativa Indica Group]
Length = 220
Score = 226 bits (577), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 112/199 (56%), Positives = 146/199 (73%), Gaps = 13/199 (6%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
DY+FK+V++GDS+VGKS +L+RF +NEF+ +SKSTIGVEFQT+ + I+GK IKAQIWDTA
Sbjct: 12 DYLFKIVLLGDSSVGKSNLLARFARNEFYPNSKSTIGVEFQTQKLVIDGKEIKAQIWDTA 71
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQER+RAVTSAYYRGA+GA++VYDI++RQ+FD V RW+ EL H+D ++ IL+GNK+DL
Sbjct: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSVGRWLNELHTHSDMNVVTILVGNKTDL 131
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKK--------- 196
R VS + AE QGLFF E SAL+ NV AF +++EIYG +S+K
Sbjct: 132 KHAREVSTAEGKALAESQGLFFMETSALDSSNVAEAFQTVVKEIYGILSRKVFQSQEQKR 191
Query: 197 -ELECGNGKVDGPPMLAGS 214
E NGK P ML+ S
Sbjct: 192 SEQSLSNGK---PVMLSDS 207
>gi|323451541|gb|EGB07418.1| hypothetical protein AURANDRAFT_6384 [Aureococcus anophagefferens]
Length = 186
Score = 226 bits (577), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 107/176 (60%), Positives = 139/176 (78%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
++ DY+FKVV+IGDS VGKS +LSRFT+NEF DSKSTIGVEF T+++ GK IKAQIW
Sbjct: 6 NEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLDSKSTIGVEFATKSIVAEGKTIKAQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYD+TK +F++V RW++ELR HA+++I ++L+GNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGALLVYDLTKHATFENVERWLKELRDHAEANIVVMLVGNK 125
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL 198
SDL RAV E+A+ AE L F E SAL+ VD AF +L EIY ++KK+L
Sbjct: 126 SDLKPQRAVPTEEAMAMAEQHNLAFIETSALDASGVDIAFQNILTEIYRLMNKKQL 181
>gi|225708490|gb|ACO10091.1| Ras-related protein Rab-11A [Osmerus mordax]
Length = 216
Score = 226 bits (577), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 108/187 (57%), Positives = 142/187 (75%), Gaps = 1/187 (0%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ + K +KAQIW
Sbjct: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVESKTVKAQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI K ++++ RW++EL+ HADS+I I+L+GNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENAERWLKELQDHADSNIVIMLVGNK 125
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
SDL +RAV ++A FAE GL F E SAL+ NV+ AF +L IY VS++++ G
Sbjct: 126 SDLRHLRAVPTDEAKAFAEKHGLSFLETSALDSSNVELAFQTILTAIYNIVSQRQM-SGR 184
Query: 203 GKVDGPP 209
D P
Sbjct: 185 SDADFSP 191
>gi|431900156|gb|ELK08070.1| Ras-related protein Rab-11B [Pteropus alecto]
Length = 226
Score = 226 bits (577), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 118/211 (55%), Positives = 150/211 (71%), Gaps = 18/211 (8%)
Query: 23 DKIDYVFK--------VVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTING 74
D+ DY+FK VV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++G
Sbjct: 6 DEYDYLFKGTAGEAQTVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDG 65
Query: 75 KIIKAQIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSI 134
K IKAQIWDTAGQERYRA+TSAYYRGA+GA++VYDI K ++++V RW++ELR HADS+I
Sbjct: 66 KTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNI 125
Query: 135 RIILIGNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVS 194
I+L+GNKSDL +RAV ++A FAE L F E SAL+ NV+ AF +L EIY VS
Sbjct: 126 VIMLVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVS 185
Query: 195 KKEL--------ECGNGKVD--GPPMLAGSK 215
+K++ GN VD PP G K
Sbjct: 186 QKQIADRAAHDESPGNNVVDISVPPTTDGQK 216
>gi|332375364|gb|AEE62823.1| unknown [Dendroctonus ponderosae]
Length = 213
Score = 226 bits (577), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 106/176 (60%), Positives = 140/176 (79%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ + GK +KAQIW
Sbjct: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVEGKTVKAQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI K ++++V RW++ELR HAD +I I+L+GNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHVTYENVERWLKELRDHADQNIVIMLVGNK 125
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL 198
SDL +RAV ++A +AE L F E SAL+ NV+ AF +L EIY +VS +++
Sbjct: 126 SDLRHLRAVPTDEAKAYAERNQLSFIETSALDSTNVEAAFTNILTEIYRSVSTRQV 181
>gi|449468736|ref|XP_004152077.1| PREDICTED: ras-related protein RABA5d-like [Cucumis sativus]
gi|449502254|ref|XP_004161590.1| PREDICTED: ras-related protein RABA5d-like [Cucumis sativus]
Length = 217
Score = 226 bits (577), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 111/211 (52%), Positives = 157/211 (74%), Gaps = 5/211 (2%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
+Y+FK+V+IGDSAVGKS +LSR+ +NEF SK+TIGVEFQT+ + I+GK +KAQIWDTA
Sbjct: 11 EYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGKEVKAQIWDTA 70
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQER+RAVTSAYYRGA+GA++VYDI++R +FD V RW++EL+ H+D+++ ++L+GNK DL
Sbjct: 71 GQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHSDTTVAMMLVGNKCDL 130
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNGKV 205
++R VS ED AE +GLFF E SAL+ NV AF +++EIY VS+K L K
Sbjct: 131 ENIRDVSVEDGTSLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSRKVLNSDTYKA 190
Query: 206 DGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
+ L+ +++ +++ + SE LS CS
Sbjct: 191 E----LSVNRVSLVNNGGSKQSE-GYLSCCS 216
>gi|340380586|ref|XP_003388803.1| PREDICTED: ras-related protein Rab-11B-like [Amphimedon
queenslandica]
Length = 219
Score = 226 bits (576), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 106/174 (60%), Positives = 140/174 (80%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
++ D++FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK++KAQIW
Sbjct: 6 EEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIKVDGKVVKAQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA+VVYDI K ++++V RW++EL+ HAD++I I+L GNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGALVVYDIAKHMTYENVERWLKELKDHADTNIVIMLAGNK 125
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKK 196
DL +RAVS E+A +FAE L F E SAL+ NV+ AF +L EIY V +K
Sbjct: 126 CDLRHLRAVSTEEAKKFAEQHSLSFIETSALDSTNVEAAFQNILTEIYNIVIQK 179
>gi|168040993|ref|XP_001772977.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162675710|gb|EDQ62202.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 215
Score = 226 bits (576), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 111/193 (57%), Positives = 149/193 (77%), Gaps = 4/193 (2%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
DY+FKVV+IGDSAVGKS +LSR+ +NEF +SK+TIGVEFQT+++ I+GK +KAQIWDTA
Sbjct: 10 DYLFKVVLIGDSAVGKSNLLSRYARNEFNSNSKATIGVEFQTQSMEIDGKELKAQIWDTA 69
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQER+RAVTSAYYRGA+GA++VYDIT+R +F++V+RW +EL+ H+D+++ ++L+GNKSDL
Sbjct: 70 GQERFRAVTSAYYRGAVGALIVYDITRRGTFENVSRWFDELKVHSDANVVVMLVGNKSDL 129
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELEC----G 201
+R V+AE+A AE ++F E SAL NV AF +L+EI+ VSKK L G
Sbjct: 130 AHIREVTAEEATALAEKNTMYFMETSALEAVNVVEAFQTVLKEIHKIVSKKALTADPNKG 189
Query: 202 NGKVDGPPMLAGS 214
N V LAGS
Sbjct: 190 NTVVASGQRLAGS 202
>gi|308494106|ref|XP_003109242.1| CRE-RAB-11.1 protein [Caenorhabditis remanei]
gi|308246655|gb|EFO90607.1| CRE-RAB-11.1 protein [Caenorhabditis remanei]
Length = 211
Score = 226 bits (576), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 107/176 (60%), Positives = 140/176 (79%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++++ GK +KAQIW
Sbjct: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSISVEGKTVKAQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI K ++++V RW++ELR HAD +I I+L+GNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHVTYENVERWLKELRDHADQNIVIMLVGNK 125
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL 198
SDL +RAV ++A +AE L F E SAL+ NV+ AF +L EIY +VS K +
Sbjct: 126 SDLRHLRAVPTDEAKIYAERNQLSFIETSALDSTNVEAAFTNILTEIYKSVSNKHV 181
>gi|125601208|gb|EAZ40784.1| hypothetical protein OsJ_25262 [Oryza sativa Japonica Group]
Length = 246
Score = 226 bits (576), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 105/173 (60%), Positives = 139/173 (80%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
DY+FK+V++GDS+VGKS +L+RF +NEF+ +SKSTIGVEFQT+ + I+GK IKAQIWDTA
Sbjct: 12 DYLFKIVLLGDSSVGKSNLLARFARNEFYPNSKSTIGVEFQTQKLVIDGKEIKAQIWDTA 71
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQER+RAVTSAYYRGA+GA++VYDI++RQ+FD V RW+ EL H+D ++ IL+GNK+DL
Sbjct: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSVGRWLNELHTHSDMNVVTILVGNKTDL 131
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL 198
R VS + AE QGLFF E SAL+ NV AF +++EIYG +S+K+L
Sbjct: 132 KHAREVSTAEGKALAESQGLFFMETSALDSSNVAEAFQTVVKEIYGILSRKDL 184
>gi|156102877|ref|XP_001617131.1| small GTPase rab11 [Plasmodium vivax Sal-1]
gi|148806005|gb|EDL47404.1| small GTPase rab11, putative [Plasmodium vivax]
Length = 230
Score = 226 bits (576), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 111/200 (55%), Positives = 149/200 (74%), Gaps = 3/200 (1%)
Query: 20 MIPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTI-NGKIIK 78
M D DY+FK+V+IGDS VGKS +LSRFT++EF +SKSTIGVEF T+++ + N KIIK
Sbjct: 3 MKEDYYDYLFKIVLIGDSGVGKSNLLSRFTRDEFNLESKSTIGVEFATKSIQLKNNKIIK 62
Query: 79 AQIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIIL 138
AQIWDTAGQERYRA+TSAYYRGA+GA++VYDITK+ SF+++ +W++ELR +ADS+I I+L
Sbjct: 63 AQIWDTAGQERYRAITSAYYRGAVGALLVYDITKKNSFENIEKWLKELRDNADSNIVILL 122
Query: 139 IGNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL 198
+GNKSDL +R ++ +A +FA+ + L F E SAL NV+ AF +LL EIY KK+
Sbjct: 123 VGNKSDLKHLRVINDNEATQFAKKEKLAFIETSALEATNVELAFHQLLNEIYNVRQKKQG 182
Query: 199 ECGNGKVDGPPMLAGSKIDV 218
+ P G KI+V
Sbjct: 183 TKNEDSMSIQP--RGKKINV 200
>gi|367001354|ref|XP_003685412.1| hypothetical protein TPHA_0D03430 [Tetrapisispora phaffii CBS 4417]
gi|357523710|emb|CCE62978.1| hypothetical protein TPHA_0D03430 [Tetrapisispora phaffii CBS 4417]
Length = 223
Score = 226 bits (576), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 107/185 (57%), Positives = 141/185 (76%), Gaps = 3/185 (1%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
DY+FK+V+IGDS VGKS +LSRFT N+F +SKSTIGVEF TRT+ + K IKAQIWDTA
Sbjct: 11 DYLFKIVLIGDSGVGKSNLLSRFTTNDFNLESKSTIGVEFATRTIEVENKKIKAQIWDTA 70
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQERYRA+TSAYYRGA+GA++VYDI+K+ S+++ W+ ELR +AD ++ + LIGNKSDL
Sbjct: 71 GQERYRAITSAYYRGAVGALIVYDISKQSSYENCNHWLTELRENADDNVAVGLIGNKSDL 130
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECG---N 202
+RAV E+A FA++ L F+E SALN +NVD AF L+ IY +SK +++ G N
Sbjct: 131 SHLRAVPTEEAKNFAQENQLLFTETSALNSENVDQAFRELITSIYQMISKHQVDLGSDNN 190
Query: 203 GKVDG 207
G +G
Sbjct: 191 GSGNG 195
>gi|119182491|ref|XP_001242374.1| hypothetical protein CIMG_06270 [Coccidioides immitis RS]
Length = 227
Score = 226 bits (576), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 111/200 (55%), Positives = 146/200 (73%), Gaps = 17/200 (8%)
Query: 20 MIPDKIDYVFK-----------------VVVIGDSAVGKSQILSRFTKNEFFFDSKSTIG 62
M D+ D++FK +V+IGDS VGKS +LSRFT+NEF DSKSTIG
Sbjct: 1 MANDEYDFLFKGTSYTPRPAMSNPILRALVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIG 60
Query: 63 VEFQTRTVTINGKIIKAQIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARW 122
VEF TR++ ++ K IK+QIWDTAGQERYRA+TSAYYRGA+GA++VYDI+K Q++++V RW
Sbjct: 61 VEFATRSIQVDSKTIKSQIWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRW 120
Query: 123 VEELRAHADSSIRIILIGNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAF 182
++ELR HADS+I I+L+GNKSDL +RAV E+A +FA D L F E SAL+ NV+ AF
Sbjct: 121 LKELRDHADSNIVIMLVGNKSDLRHLRAVPTEEAKQFASDNNLSFIETSALDASNVELAF 180
Query: 183 FRLLQEIYGAVSKKELECGN 202
+L EI+ VS K L+ G+
Sbjct: 181 QNILTEIFRIVSSKALDSGD 200
>gi|341883094|gb|EGT39029.1| hypothetical protein CAEBREN_12928 [Caenorhabditis brenneri]
Length = 211
Score = 226 bits (576), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 107/176 (60%), Positives = 140/176 (79%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++++ GK +KAQIW
Sbjct: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSISVEGKTVKAQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI K ++++V RW++ELR HAD +I I+L+GNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHVTYENVERWLKELRDHADQNIVIMLVGNK 125
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL 198
SDL +RAV ++A +AE L F E SAL+ NV+ AF +L EIY +VS K +
Sbjct: 126 SDLRHLRAVPTDEAKIYAERNQLSFIETSALDSTNVEAAFTNILTEIYKSVSNKHV 181
>gi|17507543|ref|NP_490675.1| Protein RAB-11.1 [Caenorhabditis elegans]
gi|373220016|emb|CCD71701.1| Protein RAB-11.1 [Caenorhabditis elegans]
Length = 211
Score = 226 bits (575), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 107/176 (60%), Positives = 140/176 (79%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++++ GK +KAQIW
Sbjct: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSISVEGKTVKAQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI K ++++V RW++ELR HAD +I I+L+GNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHVTYENVERWLKELRDHADQNIVIMLVGNK 125
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL 198
SDL +RAV ++A +AE L F E SAL+ NV+ AF +L EIY +VS K +
Sbjct: 126 SDLRHLRAVPTDEAKIYAERNQLSFIETSALDSTNVEAAFTNILTEIYKSVSNKHV 181
>gi|399163155|gb|AFP33153.1| rab-11.1, partial [Caenorhabditis elegans]
Length = 210
Score = 226 bits (575), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 107/176 (60%), Positives = 140/176 (79%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++++ GK +KAQIW
Sbjct: 5 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSISVEGKTVKAQIW 64
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI K ++++V RW++ELR HAD +I I+L+GNK
Sbjct: 65 DTAGQERYRAITSAYYRGAVGALLVYDIAKHVTYENVERWLKELRDHADQNIVIMLVGNK 124
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL 198
SDL +RAV ++A +AE L F E SAL+ NV+ AF +L EIY +VS K +
Sbjct: 125 SDLRHLRAVPTDEAKIYAERNQLSFIETSALDSTNVEAAFTNILTEIYKSVSNKHV 180
>gi|297828009|ref|XP_002881887.1| hypothetical protein ARALYDRAFT_903694 [Arabidopsis lyrata subsp.
lyrata]
gi|297327726|gb|EFH58146.1| hypothetical protein ARALYDRAFT_903694 [Arabidopsis lyrata subsp.
lyrata]
Length = 213
Score = 226 bits (575), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 103/173 (59%), Positives = 142/173 (82%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
+Y+FK+V+IGDSAVGKS +L+R+ +NEF +SK+TIGVEFQT+++ I+GK +KAQIWDTA
Sbjct: 9 EYLFKIVIIGDSAVGKSNLLTRYARNEFNPNSKATIGVEFQTQSMVIDGKEVKAQIWDTA 68
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQER+RAVTSAYYRGA+GA+VVYDIT+ +F++V RW++EL H+D+++ +LIGNK DL
Sbjct: 69 GQERFRAVTSAYYRGAVGALVVYDITRSSTFENVGRWLDELNTHSDTTVAKMLIGNKCDL 128
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL 198
+RAVS E+ AE +GLFF E SAL+ NV TAF +++EIY +S+K+L
Sbjct: 129 ESIRAVSVEEGKSLAESEGLFFMETSALDSTNVKTAFEMVIREIYSNISRKQL 181
>gi|294887922|ref|XP_002772283.1| Rab11, putative [Perkinsus marinus ATCC 50983]
gi|239876358|gb|EER04099.1| Rab11, putative [Perkinsus marinus ATCC 50983]
Length = 234
Score = 226 bits (575), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 109/187 (58%), Positives = 138/187 (73%), Gaps = 1/187 (0%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
DY+FKVV+IGDS VGKS ILSRFT+ EF +S+STIGVEF T++V I K++KAQIWDTA
Sbjct: 16 DYLFKVVLIGDSGVGKSNILSRFTRGEFNLESRSTIGVEFATKSVRIGEKVVKAQIWDTA 75
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQERYRA+TSAYYRGA+GA++VYDI+KR SFD+ ARW++ELR HADS I ++L+GNK DL
Sbjct: 76 GQERYRAITSAYYRGAVGALLVYDISKRSSFDNAARWLKELREHADSDIVVMLVGNKCDL 135
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELEC-GNGK 204
+RA+ E+A +F D L F E SAL NV+ AF +L++IY S K G
Sbjct: 136 SHLRAIEEEEAEKFCSDNDLLFIETSALEATNVEEAFQNILEDIYKVNSSKPTPSQAAGA 195
Query: 205 VDGPPML 211
G P +
Sbjct: 196 AAGDPSM 202
>gi|345309353|ref|XP_001518037.2| PREDICTED: ras-related protein Rab-11A-like [Ornithorhynchus
anatinus]
Length = 376
Score = 226 bits (575), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 107/171 (62%), Positives = 137/171 (80%)
Query: 28 VFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTAGQ 87
V VV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIWDTAGQ
Sbjct: 171 VSPVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQ 230
Query: 88 ERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDLVD 147
ERYRA+TSAYYRGA+GA++VYDI K ++++V RW++ELR HADS+I I+L+GNKSDL
Sbjct: 231 ERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRH 290
Query: 148 MRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL 198
+RAV ++A FAE GL F E SAL+ NV+ AF +L EIY VS+K++
Sbjct: 291 LRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQM 341
>gi|392578458|gb|EIW71586.1| hypothetical protein TREMEDRAFT_42942 [Tremella mesenterica DSM
1558]
Length = 214
Score = 226 bits (575), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 113/198 (57%), Positives = 148/198 (74%), Gaps = 3/198 (1%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK +KAQIWDTA
Sbjct: 8 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTVKAQIWDTA 67
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQERYRA+TSAYYRGA+GA++VYDI K ++++V RW++ELR HAD +I I+L+GNKSDL
Sbjct: 68 GQERYRAITSAYYRGAVGALLVYDIAKHATYENVTRWLKELRDHADQNIVIMLVGNKSDL 127
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNGKV 205
+RAV ++A F+ + L F E SAL+ NV++AF +L +IY VS K L+ +G V
Sbjct: 128 KHLRAVPTDEAKAFSTENNLSFIETSALDASNVESAFQNILTDIYRIVSSKALDS-SGDV 186
Query: 206 DGPPMLAGSKIDVISGAD 223
P G I V AD
Sbjct: 187 IKPA--GGETILVAPTAD 202
>gi|17380746|gb|AAL36203.1| putative RAS-related protein ARA-1 [Arabidopsis thaliana]
Length = 218
Score = 226 bits (575), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 104/173 (60%), Positives = 143/173 (82%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
+Y+FK+VVIGDSAVGKS +LSR+ +NEF +SK+TIGVEFQT+++ I GK +KAQIWDTA
Sbjct: 10 EYLFKIVVIGDSAVGKSNLLSRYARNEFSANSKATIGVEFQTQSMEIEGKEVKAQIWDTA 69
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQER+RAVTSAYYRGA+GA+VVYDIT+R +F+ V RW+++L+ H+D+++ +L+GNK DL
Sbjct: 70 GQERFRAVTSAYYRGAVGALVVYDITRRTTFESVGRWLDQLKIHSDTTVARMLVGNKCDL 129
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL 198
++RAVS E+ AE++GLFF E SAL+ NV TAF ++ +IY VS+K+L
Sbjct: 130 ENIRAVSVEEGKALAEEEGLFFVETSALDSTNVKTAFEMVILDIYNNVSRKQL 182
>gi|118387620|ref|XP_001026914.1| Ras-related protein Rab11A, putative [Tetrahymena thermophila]
gi|89308681|gb|EAS06669.1| Ras-related protein Rab11A, putative [Tetrahymena thermophila
SB210]
gi|307777774|dbj|BAJ21283.1| Rab-family small GTPase Rab11B [Tetrahymena thermophila]
Length = 214
Score = 226 bits (575), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 109/194 (56%), Positives = 140/194 (72%), Gaps = 3/194 (1%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ D++FK+V+IGDS VGK+ +LSRFTKNEF DSK TIGVEF T+TV K IKAQIW
Sbjct: 7 DEYDFLFKIVLIGDSGVGKTNLLSRFTKNEFNMDSKPTIGVEFATKTVITENKYIKAQIW 66
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQE+YRA+T+AYYRGA+GA+ +YDITK+Q+FD+V +W+ ELR +AD++I +LIGNK
Sbjct: 67 DTAGQEKYRAITNAYYRGAVGALTLYDITKQQTFDNVKKWLHELREYADANIICMLIGNK 126
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
DL +MR V EDA +FAE+ L F E SA NVD AF +L+ EIY + + E
Sbjct: 127 CDLQEMRQVKTEDAAKFAEENNLAFMETSAAQAINVDQAFQKLITEIYNNLKTRPNE--- 183
Query: 203 GKVDGPPMLAGSKI 216
K P G+ I
Sbjct: 184 EKKKAQPQQNGNNI 197
>gi|210075737|ref|XP_502830.2| YALI0D14630p [Yarrowia lipolytica]
gi|199425807|emb|CAG81018.2| YALI0D14630p [Yarrowia lipolytica CLIB122]
Length = 212
Score = 226 bits (575), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 107/177 (60%), Positives = 139/177 (78%)
Query: 21 IPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQ 80
+ D+ D++FKVV+IGDS VGK+ IL RFT++EF DSKSTIGVEF TRTV I+ KIIKAQ
Sbjct: 1 MSDEYDFLFKVVMIGDSGVGKTNILGRFTRDEFNLDSKSTIGVEFATRTVNIDNKIIKAQ 60
Query: 81 IWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIG 140
IWDTAGQERYRA+TSAYYRGA+GA+++YD+T QS+ +++RW++EL+ HADS+I ++L+G
Sbjct: 61 IWDTAGQERYRAITSAYYRGAVGALLLYDVTSTQSYKNISRWLQELQDHADSNIVLMLVG 120
Query: 141 NKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKE 197
NK DL +RAV E+A +FA L F E SAL+G +V AF +L EIY VS E
Sbjct: 121 NKCDLKHLRAVPTEEAKQFASQNKLLFIETSALDGTDVALAFRNILTEIYHRVSAAE 177
>gi|83765744|dbj|BAE55887.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 221
Score = 226 bits (575), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 107/172 (62%), Positives = 138/172 (80%)
Query: 31 VVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTAGQERY 90
+V+IGDS VGKS +LSRFT+NEF D+KSTIGVEF TR++ ++ K IKAQIWDTAGQERY
Sbjct: 22 MVLIGDSGVGKSNLLSRFTRNEFNLDTKSTIGVEFATRSIQVDSKTIKAQIWDTAGQERY 81
Query: 91 RAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDLVDMRA 150
RA+TSAYYRGA+GA++VYDI+K Q++D+V RW++ELR HADS+I I+L+GNKSDL +RA
Sbjct: 82 RAITSAYYRGAVGALLVYDISKHQTYDNVNRWLKELRDHADSNIVIMLVGNKSDLRHLRA 141
Query: 151 VSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
V E+A +FA + L F E SAL+ NV+ AF +L EIY VS K L+ G+
Sbjct: 142 VPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALDSGD 193
>gi|15224226|ref|NP_181842.1| Ras-related protein ARA-4 [Arabidopsis thaliana]
gi|114089|sp|P28187.1|RAA5C_ARATH RecName: Full=Ras-related protein RABA5c; Short=AtRABA5c; AltName:
Full=Ras-related protein Ara-4; AltName:
Full=Ras-related protein Rab11F; Short=AtRab11F
gi|217839|dbj|BAA00831.1| small GTP-binding protein [Arabidopsis thaliana]
gi|3763922|gb|AAC64302.1| Ras-related GTP-binding protein (ARA-4) [Arabidopsis thaliana]
gi|107738301|gb|ABF83674.1| At2g43130 [Arabidopsis thaliana]
gi|222423848|dbj|BAH19889.1| AT2G43130 [Arabidopsis thaliana]
gi|330255118|gb|AEC10212.1| Ras-related protein ARA-4 [Arabidopsis thaliana]
Length = 214
Score = 225 bits (574), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 103/173 (59%), Positives = 142/173 (82%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
+Y+FK+V+IGDSAVGKS +L+R+ +NEF +SK+TIGVEFQT+++ I+GK +KAQIWDTA
Sbjct: 10 EYLFKIVIIGDSAVGKSNLLTRYARNEFNPNSKATIGVEFQTQSMLIDGKEVKAQIWDTA 69
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQER+RAVTSAYYRGA+GA+VVYDIT+ +F++V RW++EL H+D+++ +LIGNK DL
Sbjct: 70 GQERFRAVTSAYYRGAVGALVVYDITRSSTFENVGRWLDELNTHSDTTVAKMLIGNKCDL 129
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL 198
+RAVS E+ AE +GLFF E SAL+ NV TAF +++EIY +S+K+L
Sbjct: 130 ESIRAVSVEEGKSLAESEGLFFMETSALDSTNVKTAFEMVIREIYSNISRKQL 182
>gi|356535256|ref|XP_003536164.1| PREDICTED: ras-related protein RABA5a-like [Glycine max]
Length = 223
Score = 225 bits (574), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 113/212 (53%), Positives = 152/212 (71%), Gaps = 2/212 (0%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
DY+FK+V+IGDSAVGKS +L+RF ++EF+ +SKSTIGVEFQT+ + INGK +KAQIWDTA
Sbjct: 12 DYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQER+RAVTSAYYRGA+GA++VYDI++RQ+FD + RW+ EL H+D ++ IL+GNKSDL
Sbjct: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNGKV 205
D R V+ + AE QGLFF E SAL+ NV AF +++EIY +S+K +
Sbjct: 132 KDAREVATAEGKALAEAQGLFFMETSALDSSNVAAAFETVVKEIYNILSRKVMISQELNK 191
Query: 206 DGPPMLAGSKIDVISG-ADLEISEMKKLSTCS 236
+ K V+ G D+E ++ KK CS
Sbjct: 192 QDVTRIENGKTVVLQGEGDVEAAQSKK-GCCS 222
>gi|403214005|emb|CCK68506.1| hypothetical protein KNAG_0B00580 [Kazachstania naganishii CBS
8797]
Length = 225
Score = 225 bits (574), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 105/177 (59%), Positives = 137/177 (77%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
DY+FK+V+IGDS VGKS +LSRFT NEF +SKSTIGVEF TRT+ + GK IKAQIWDTA
Sbjct: 11 DYLFKIVLIGDSGVGKSNLLSRFTTNEFNIESKSTIGVEFATRTIEVEGKKIKAQIWDTA 70
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQERYRA+TSAYYRGA+GA++VYDI+K ++++ W+ ELR +AD ++ + LIGNKSDL
Sbjct: 71 GQERYRAITSAYYRGAVGALIVYDISKSSTYENCNHWLTELRENADDNVAVGLIGNKSDL 130
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
+RAV ++A FA++ L F+E SALN +NVD AF L+ IY VSK +++ N
Sbjct: 131 AHLRAVPTDEAKNFAQENQLLFTETSALNSENVDQAFRELITAIYQMVSKHQVDLDN 187
>gi|281347336|gb|EFB22920.1| hypothetical protein PANDA_002189 [Ailuropoda melanoleuca]
Length = 205
Score = 225 bits (573), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 107/170 (62%), Positives = 137/170 (80%)
Query: 29 FKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTAGQE 88
F VV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIWDTAGQE
Sbjct: 1 FSVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQE 60
Query: 89 RYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDLVDM 148
RYRA+TSAYYRGA+GA++VYDI K ++++V RW++ELR HADS+I I+L+GNKSDL +
Sbjct: 61 RYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHL 120
Query: 149 RAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL 198
RAV ++A FAE GL F E SAL+ NV+ AF +L EIY VS+K++
Sbjct: 121 RAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQM 170
>gi|73535736|pdb|1YZK|A Chain A, Gppnhp Bound Rab11 Gtpase
Length = 184
Score = 225 bits (573), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 108/173 (62%), Positives = 139/173 (80%), Gaps = 1/173 (0%)
Query: 19 NMIP-DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKII 77
+++P DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK I
Sbjct: 10 SLVPRGSYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI 69
Query: 78 KAQIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRII 137
KAQIWDTAGQERYRA+TSAYYRGA+GA++VYDI K ++++V RW++ELR HADS+I I+
Sbjct: 70 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIM 129
Query: 138 LIGNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIY 190
L+GNKSDL +RAV ++A FAE GL F E SAL+ NV+ AF +L EIY
Sbjct: 130 LVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIY 182
>gi|410081132|ref|XP_003958146.1| hypothetical protein KAFR_0F04160 [Kazachstania africana CBS 2517]
gi|372464733|emb|CCF59011.1| hypothetical protein KAFR_0F04160 [Kazachstania africana CBS 2517]
Length = 245
Score = 225 bits (573), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 109/193 (56%), Positives = 141/193 (73%), Gaps = 8/193 (4%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
DY+FK+V+IGDS VGKS +LSRFT NEF +SKSTIGVEF TRT+ + GK IKAQIWDTA
Sbjct: 11 DYLFKIVLIGDSGVGKSNLLSRFTTNEFNIESKSTIGVEFATRTIEMEGKKIKAQIWDTA 70
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQERYRA+TSAYYRGA+GA++VYDI+K ++++ W+ ELR +AD ++ + LIGNKSDL
Sbjct: 71 GQERYRAITSAYYRGAVGALIVYDISKSSTYENCNHWLSELRENADDNVAVGLIGNKSDL 130
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECG---- 201
+RAV ++A FA + L F+E SALN +NVD AF L+ IY VSK +++ G
Sbjct: 131 AHLRAVPTDEAKNFALENQLLFTETSALNSENVDQAFRELITAIYQMVSKHQVDLGDSGN 190
Query: 202 ----NGKVDGPPM 210
NG GP +
Sbjct: 191 NDINNGTPKGPTI 203
>gi|226469320|emb|CAX70139.1| Rab-protein 11 [Schistosoma japonicum]
Length = 218
Score = 225 bits (573), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 108/172 (62%), Positives = 136/172 (79%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGKS +LSRFT++ F +SKSTIGVEF TR V I+GK+IKAQIW
Sbjct: 11 DEYDYLFKVVLIGDSGVGKSNLLSRFTRDTFDLESKSTIGVEFATRNVNIDGKVIKAQIW 70
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA+VVYD+ K QSF ++ W+ ELR HA+ +I ++L+GNK
Sbjct: 71 DTAGQERYRAITSAYYRGAVGALVVYDVCKLQSFHNLTSWLNELRDHAEKNIVMMLVGNK 130
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVS 194
DL +R V EDA FA+ QGL F E SAL+ NV+ AF ++LQ+IY VS
Sbjct: 131 CDLRHLRNVGTEDARFFAQQQGLSFIETSALDSTNVEEAFCQILQDIYNIVS 182
>gi|387017948|gb|AFJ51092.1| RAB11a, member RAS oncogene family, like [Crotalus adamanteus]
Length = 217
Score = 225 bits (573), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 106/179 (59%), Positives = 142/179 (79%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FK+V+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++ K +KAQIW
Sbjct: 6 DEYDYLFKIVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIQVDNKTVKAQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI K ++++ W++EL+ HAD++I I+L+GNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKYLTYENAECWLKELQDHADANIVIMLVGNK 125
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECG 201
SDL +RAV ++A FAE GL F EASAL+ NV+ AF +L EIY VS+++L G
Sbjct: 126 SDLRHLRAVPTDEAKSFAEKNGLSFIEASALDSTNVEAAFHNILTEIYRIVSQRQLAGG 184
>gi|78499349|gb|ABB45709.1| Ras-related protein RAB11A [Ovis aries]
Length = 208
Score = 225 bits (573), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 108/173 (62%), Positives = 138/173 (79%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIWDTA
Sbjct: 1 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 60
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQERYRA+TSAYYRGA+GA++VYDI K ++++V RW++ELR HADS+I I+L+GNKSDL
Sbjct: 61 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDL 120
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL 198
RAV ++A FAE GL F E AL+ NV+ AF +L EIY V +K++
Sbjct: 121 RHFRAVPTDEARAFAEKNGLSFIETFALDSTNVEAAFQTILTEIYRIVFQKQM 173
>gi|449471775|ref|XP_002198100.2| PREDICTED: ras-related protein Rab-11A [Taeniopygia guttata]
Length = 258
Score = 225 bits (573), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 106/168 (63%), Positives = 136/168 (80%)
Query: 31 VVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTAGQERY 90
VV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIWDTAGQERY
Sbjct: 56 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERY 115
Query: 91 RAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDLVDMRA 150
RA+TSAYYRGA+GA++VYDI K ++++V RW++ELR HADS+I I+L+GNKSDL +RA
Sbjct: 116 RAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRA 175
Query: 151 VSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL 198
V ++A FAE GL F E SAL+ NV+ AF +L EIY VS+K++
Sbjct: 176 VPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQM 223
>gi|363807622|ref|NP_001242668.1| uncharacterized protein LOC100789187 [Glycine max]
gi|255641449|gb|ACU21000.1| unknown [Glycine max]
Length = 226
Score = 225 bits (573), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 104/171 (60%), Positives = 137/171 (80%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
DY+FK+V+IGDSAVGKS +L+RF ++EF+ +SKSTIGVEFQT+ + INGK +KAQIWDTA
Sbjct: 12 DYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQER+RAVTSAYYRGA+GA++VYDI++RQ+FD + RW+ EL H+D ++ IL+GNKSDL
Sbjct: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKK 196
D R V+ + AE QGLFF E SAL+ NV AF +++EIY +S+K
Sbjct: 132 KDARKVATAEGKALAEAQGLFFMETSALDSSNVAAAFETVVKEIYNILSRK 182
>gi|221061061|ref|XP_002262100.1| small GTPase Rab11 [Plasmodium knowlesi strain H]
gi|193811250|emb|CAQ41978.1| small GTPase Rab11, putative [Plasmodium knowlesi strain H]
Length = 216
Score = 225 bits (573), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 106/179 (59%), Positives = 142/179 (79%), Gaps = 1/179 (0%)
Query: 20 MIPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTI-NGKIIK 78
M D DY+FK+V+IGDS VGKS +LSRFT++EF +SKSTIGVEF T+++ + N KIIK
Sbjct: 3 MKEDYYDYLFKIVLIGDSGVGKSNLLSRFTRDEFNLESKSTIGVEFATKSIQLKNNKIIK 62
Query: 79 AQIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIIL 138
AQIWDTAGQERYRA+TSAYYRGA+GA++VYDITK+ SF+++ +W++ELR +ADS+I I+L
Sbjct: 63 AQIWDTAGQERYRAITSAYYRGAVGALLVYDITKKNSFENIEKWLKELRDNADSNIVILL 122
Query: 139 IGNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKE 197
+GNKSDL +R ++ +A +FA+ + L F E SAL NV+ AF +LL EIY KK+
Sbjct: 123 VGNKSDLKHLRVINDNEATQFAKKEKLAFIETSALEATNVELAFHQLLNEIYNVRQKKQ 181
>gi|226469322|emb|CAX70140.1| Rab-protein 11 [Schistosoma japonicum]
Length = 218
Score = 225 bits (573), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 108/172 (62%), Positives = 136/172 (79%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGKS +LSRFT++ F +SKSTIGVEF TR V I+GK+IKAQIW
Sbjct: 11 DEYDYLFKVVLIGDSGVGKSNLLSRFTRDTFDLESKSTIGVEFATRNVNIDGKVIKAQIW 70
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA+VVYD+ K QSF ++ W+ ELR HA+ +I ++L+GNK
Sbjct: 71 DTAGQERYRAITSAYYRGAVGALVVYDVCKLQSFHNLTSWLNELRDHAEKNIVMMLVGNK 130
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVS 194
DL +R V EDA FA+ QGL F E SAL+ NV+ AF ++LQ+IY VS
Sbjct: 131 CDLRHLRNVGTEDARFFAQQQGLSFIETSALDSTNVEEAFCQILQDIYSIVS 182
>gi|89257484|gb|ABD64975.1| Ras family GTP-binding protein [Brassica oleracea]
Length = 221
Score = 225 bits (573), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 113/211 (53%), Positives = 148/211 (70%), Gaps = 2/211 (0%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
DY+FK+V+IGDSAVGKS +L+RF ++EF+ +SKSTIGVEFQT+ + INGK IKAQIWDTA
Sbjct: 12 DYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEIKAQIWDTA 71
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQER+RAVTSAYYRGA+GA++VYDI+++Q+F + RW+ EL H+D ++ IL+GNKSDL
Sbjct: 72 GQERFRAVTSAYYRGAVGALLVYDISRQQTFQSIGRWLNELHTHSDMNVVTILVGNKSDL 131
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNGKV 205
+R V + AE QGLFF E SAL+ NV AF +++EIY +S+K +
Sbjct: 132 KGIREVPTSEGKALAEAQGLFFMETSALDSSNVAAAFETVVKEIYNILSRKVMSSQELNK 191
Query: 206 DGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
P L+ K VI E E KK CS
Sbjct: 192 QDPASLSNGKKVVIPSE--EQGESKKGGCCS 220
>gi|389586140|dbj|GAB68869.1| small GTPase rab11 [Plasmodium cynomolgi strain B]
Length = 216
Score = 225 bits (573), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 111/200 (55%), Positives = 149/200 (74%), Gaps = 3/200 (1%)
Query: 20 MIPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTI-NGKIIK 78
M D DY+FK+V+IGDS VGKS +LSRFT++EF +SKSTIGVEF T+++ + N KIIK
Sbjct: 3 MKEDYYDYLFKIVLIGDSGVGKSNLLSRFTRDEFNLESKSTIGVEFATKSIQLKNNKIIK 62
Query: 79 AQIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIIL 138
AQIWDTAGQERYRA+TSAYYRGA+GA++VYDITK+ SF+++ +W++ELR +ADS+I I+L
Sbjct: 63 AQIWDTAGQERYRAITSAYYRGAVGALLVYDITKKNSFENIEKWLKELRDNADSNIVILL 122
Query: 139 IGNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL 198
+GNKSDL +R ++ +A +FA+ + L F E SAL NV+ AF +LL EIY KK+
Sbjct: 123 VGNKSDLKHLRVINDNEATQFAKKEKLAFIETSALEATNVELAFHQLLNEIYNVRQKKQG 182
Query: 199 ECGNGKVDGPPMLAGSKIDV 218
+ P G KI+V
Sbjct: 183 TKNEDSMSIQPR--GKKINV 200
>gi|440902572|gb|ELR53352.1| Ras-related protein Rab-11A, partial [Bos grunniens mutus]
Length = 258
Score = 225 bits (573), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 106/175 (60%), Positives = 139/175 (79%)
Query: 24 KIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWD 83
+ + +VV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIWD
Sbjct: 49 PLQSLIEVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWD 108
Query: 84 TAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKS 143
TAGQERYRA+TSAYYRGA+GA++VYDI K ++++V RW++ELR HADS+I I+L+GNKS
Sbjct: 109 TAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKS 168
Query: 144 DLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL 198
DL +RAV ++A FAE GL F E SAL+ NV+ AF +L EIY VS+K++
Sbjct: 169 DLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQM 223
>gi|302789646|ref|XP_002976591.1| rab family GTPase [Selaginella moellendorffii]
gi|300155629|gb|EFJ22260.1| rab family GTPase [Selaginella moellendorffii]
Length = 221
Score = 224 bits (572), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 103/171 (60%), Positives = 141/171 (82%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
DY+FKVV+IGDSAVGKS +L+R+ +NEF +SK+TIGVEFQT+++ INGK +KAQ+WDTA
Sbjct: 11 DYIFKVVLIGDSAVGKSNLLTRYARNEFNHNSKATIGVEFQTQSMRINGKEVKAQVWDTA 70
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQER+RAVTSAYYRGALGA+VVYDIT++Q+F+++++W++ELR + SS+ +L+GNK DL
Sbjct: 71 GQERFRAVTSAYYRGALGALVVYDITRKQTFENISKWLDELRTYGGSSVVTMLVGNKCDL 130
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKK 196
D+R VS E+ E AE + LFF E SAL NV TAF +++EI+ A S++
Sbjct: 131 TDIREVSVEEGKELAESENLFFMETSALASTNVKTAFQNVVREIFDAKSRR 181
>gi|295658933|ref|XP_002790026.1| GTP-binding protein ypt3 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226282109|gb|EEH37675.1| GTP-binding protein ypt3 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 220
Score = 224 bits (572), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 115/201 (57%), Positives = 144/201 (71%), Gaps = 12/201 (5%)
Query: 20 MIPDKIDYVFK----------VVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRT 69
M D+ D++FK +V+IGDS VGKS +LSRFT+NEF DSKSTIGVEF TR+
Sbjct: 1 MANDEYDFLFKGIYLPGPVLRMVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRS 60
Query: 70 VTINGKIIKAQIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAH 129
+ ++GK IKAQIWDTAGQERYRA+TSAYYRGA+GA++VYD TK+Q+F + RW++ELR H
Sbjct: 61 IQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDTTKKQTFANCERWLKELREH 120
Query: 130 ADSSIRIILIGNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEI 189
AD +I I+L+GNK D MR V DAVEFA++ L F E SAL+ NV+ AF +L EI
Sbjct: 121 ADKNIVIMLVGNKIDEKHMRDVKTSDAVEFADEMKLSFIETSALDATNVELAFQNILTEI 180
Query: 190 YGAVSKKELECGNGKVDGPPM 210
Y VS K LE NG P+
Sbjct: 181 YRIVSSKALE--NGSSSQNPL 199
>gi|297833530|ref|XP_002884647.1| hypothetical protein ARALYDRAFT_896904 [Arabidopsis lyrata subsp.
lyrata]
gi|297330487|gb|EFH60906.1| hypothetical protein ARALYDRAFT_896904 [Arabidopsis lyrata subsp.
lyrata]
Length = 217
Score = 224 bits (572), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 111/211 (52%), Positives = 155/211 (73%), Gaps = 4/211 (1%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
+Y+FK+V+IGDSAVGKS +LSRF+++EF +SK+TIGVEFQT+ V I GK +KAQIWDTA
Sbjct: 10 EYLFKIVLIGDSAVGKSNLLSRFSRDEFDTNSKATIGVEFQTQLVEIEGKEVKAQIWDTA 69
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQER+RAVTSAYYRGA GA++VYDIT+ +F+ V RW++EL H D+++ +L+GNK DL
Sbjct: 70 GQERFRAVTSAYYRGAFGALIVYDITRSDTFESVKRWLQELNTHCDTAVAQMLVGNKCDL 129
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNGKV 205
D+RAVS E+ AE++GLFF E SAL+ NVD AF +++EI+ VS+K L K
Sbjct: 130 EDIRAVSVEEGKALAEEEGLFFMETSALDATNVDKAFEIVIREIFNNVSRKLLNSDAYKA 189
Query: 206 DGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
+ L+ +++ +++ D S + S CS
Sbjct: 190 E----LSVNRVSLVNNQDGSESSWRNPSCCS 216
>gi|356569119|ref|XP_003552753.1| PREDICTED: ras-related protein RABA5d-like [Glycine max]
Length = 219
Score = 224 bits (572), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 109/212 (51%), Positives = 155/212 (73%), Gaps = 5/212 (2%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
+Y+FK+V+IGDSAVGKS +LSR+ +NEF SK+TIGVEFQT+ + I+ K +KAQIWDTA
Sbjct: 11 EYLFKIVIIGDSAVGKSNLLSRYARNEFNMHSKATIGVEFQTQCLEIDSKEVKAQIWDTA 70
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQER+RAVTSAYYRGA+GA++VYDI++R +FD V RW++EL+ H D+++ ++L+GNK DL
Sbjct: 71 GQERFRAVTSAYYRGAVGALIVYDISRRTTFDSVGRWLDELKTHCDTTVAMMLVGNKCDL 130
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNGKV 205
++RAVS ++ AE +GLFF E SAL+ NV TAF +++EIY VS+K L K
Sbjct: 131 ENIRAVSVDEGKSLAEAEGLFFMETSALDSTNVKTAFEMVIREIYTNVSRKVLNSETYKA 190
Query: 206 DGPPMLAGSKIDVI-SGADLEISEMKKLSTCS 236
+ L+ +++ ++ +GA S CS
Sbjct: 191 E----LSVNRVSLVNNGASTSKQNQPYFSCCS 218
>gi|56758728|gb|AAW27504.1| SJCHGC09130 protein [Schistosoma japonicum]
Length = 228
Score = 224 bits (572), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 108/172 (62%), Positives = 136/172 (79%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGKS +LSRFT++ F +SKSTIGVEF TR V I+GK+IKAQIW
Sbjct: 22 DEYDYLFKVVLIGDSGVGKSNLLSRFTRDTFDLESKSTIGVEFATRNVNIDGKVIKAQIW 81
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA+VVYD+ K QSF ++ W+ ELR HA+ +I ++L+GNK
Sbjct: 82 DTAGQERYRAITSAYYRGAVGALVVYDVCKLQSFHNLTSWLNELRDHAEKNIVMMLVGNK 141
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVS 194
DL +R V EDA FA+ QGL F E SAL+ NV+ AF ++LQ+IY VS
Sbjct: 142 CDLRHLRNVGTEDARFFAQQQGLSFIETSALDSTNVEEAFCQILQDIYSIVS 193
>gi|224131546|ref|XP_002321111.1| predicted protein [Populus trichocarpa]
gi|222861884|gb|EEE99426.1| predicted protein [Populus trichocarpa]
Length = 217
Score = 224 bits (572), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 108/211 (51%), Positives = 156/211 (73%), Gaps = 4/211 (1%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
+Y+FK+V+IGDSAVGKS +LSR+ +NEF SK+TIGVEFQT+++ I+GK +KAQIWDTA
Sbjct: 10 EYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQSMEIDGKEVKAQIWDTA 69
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQER+RAVTSAYYRGA+GA++VYDI++R +FD V RW++EL+ H+D+++ ++L+GNK DL
Sbjct: 70 GQERFRAVTSAYYRGAVGALIVYDISRRTTFDSVGRWLDELKTHSDTTVAMMLVGNKCDL 129
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNGKV 205
++R VS E+A AE +GLFF E SAL+ NV AF +++EIY VS+K L K
Sbjct: 130 ENIRDVSVEEAKCLAEAEGLFFMETSALDSTNVKKAFEIVIREIYNNVSRKVLNSDTYKA 189
Query: 206 DGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
+ L+ +++ +++ + S CS
Sbjct: 190 E----LSLNRVTLVNNGNDSKQAQSYFSCCS 216
>gi|297843374|ref|XP_002889568.1| hypothetical protein ARALYDRAFT_887774 [Arabidopsis lyrata subsp.
lyrata]
gi|297335410|gb|EFH65827.1| hypothetical protein ARALYDRAFT_887774 [Arabidopsis lyrata subsp.
lyrata]
Length = 218
Score = 224 bits (571), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 104/173 (60%), Positives = 142/173 (82%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
+Y+FK+VVIGDSAVGKS +LSR+ +NEF +SK+TIGVEFQT+++ I GK +KAQIWDTA
Sbjct: 10 EYLFKIVVIGDSAVGKSNLLSRYARNEFSANSKATIGVEFQTQSMAIEGKEVKAQIWDTA 69
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQER+RAVTSAYYRGA+GA+VVYDIT+R +F+ V RW++EL+ H+D+++ +L+GNK DL
Sbjct: 70 GQERFRAVTSAYYRGAVGALVVYDITRRTTFESVGRWLDELKIHSDTTVARMLVGNKCDL 129
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL 198
++RAVS ++ AE +GLFF E SAL+ NV TAF ++ +IY VS+K+L
Sbjct: 130 ENIRAVSVDEGKALAEAEGLFFVETSALDSTNVKTAFEMVILDIYNNVSRKQL 182
>gi|42543204|pdb|1OIW|A Chain A, X-ray Structure Of The Small G Protein Rab11a In Complex
With Gtpgammas
gi|60593433|pdb|1OIX|A Chain A, X-Ray Structure Of The Small G Protein Rab11a In Complex
With Gdp And Pi
Length = 191
Score = 224 bits (571), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 107/168 (63%), Positives = 136/168 (80%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIW
Sbjct: 24 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIW 83
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAG ERYRA+TSAYYRGA+GA++VYDI K ++++V RW++ELR HADS+I I+L+GNK
Sbjct: 84 DTAGLERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNK 143
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIY 190
SDL +RAV ++A FAE GL F E SAL+ NV+ AF +L EIY
Sbjct: 144 SDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIY 191
>gi|303730|dbj|BAA02108.1| GTP-binding protein [Pisum sativum]
gi|738933|prf||2001457A GTP-binding protein
Length = 215
Score = 224 bits (571), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 112/211 (53%), Positives = 156/211 (73%), Gaps = 5/211 (2%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
+Y+FK+V+IGDSAVGKS +LSRF +NEF +SK+TIGVEFQT+TV I+GK +KAQIWDTA
Sbjct: 10 EYLFKIVLIGDSAVGKSNLLSRFARNEFDSNSKATIGVEFQTQTVEIDGKEVKAQIWDTA 69
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQER+RAVTSAYYRGA GA+VVYDI++R +FD + RW++EL DS++ +L+GNK DL
Sbjct: 70 GQERFRAVTSAYYRGAFGALVVYDISRRGTFDSIKRWLDELTTQNDSTVARMLVGNKCDL 129
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNGKV 205
+R VS E+ FAE++GLFF E SAL+ NV AF +++EIY +S+K L + K
Sbjct: 130 ESLREVSTEEGKAFAEEEGLFFMETSALDSTNVQKAFEIVIREIYNNISRKVLNSDSYKA 189
Query: 206 DGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
+ L+ +++ +++GA + + S CS
Sbjct: 190 E----LSVNRVSLVNGAGSK-KNLLNFSCCS 215
>gi|324508455|gb|ADY43568.1| Ras-related protein Rab-11A [Ascaris suum]
Length = 240
Score = 224 bits (571), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 109/185 (58%), Positives = 141/185 (76%), Gaps = 1/185 (0%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ + GK +KAQIWDTA
Sbjct: 34 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVEGKTVKAQIWDTA 93
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQERYRA+TSAYYRGA+GA++VYDI K +++ V RW++ELR HAD +I I+L+GNKSDL
Sbjct: 94 GQERYRAITSAYYRGAVGALLVYDIAKHVTYEAVERWLKELRDHADQNIVIMLVGNKSDL 153
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNGKV 205
+RAV ++A +AE L F E SAL+ NV+ AF +L EIY +VS K G+ +V
Sbjct: 154 RHLRAVPTDEAKAYAEKNQLSFIETSALDSTNVEAAFTNILTEIYKSVSVKHFG-GDDRV 212
Query: 206 DGPPM 210
P+
Sbjct: 213 QVSPV 217
>gi|254583127|ref|XP_002499295.1| ZYRO0E08492p [Zygosaccharomyces rouxii]
gi|238942869|emb|CAR31040.1| ZYRO0E08492p [Zygosaccharomyces rouxii]
Length = 218
Score = 224 bits (571), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 112/212 (52%), Positives = 148/212 (69%), Gaps = 5/212 (2%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
DY+FK+V+IGDS VGKS +LSRFT N+F +SKSTIGVEF TRT+ + GK IKAQIWDTA
Sbjct: 11 DYLFKIVLIGDSGVGKSNLLSRFTTNDFNMESKSTIGVEFATRTIEVEGKKIKAQIWDTA 70
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQERYRA+TSAYYRGA+GA++VYDI+K S+++ W+ ELR +AD ++ + LIGNKSDL
Sbjct: 71 GQERYRAITSAYYRGAVGALIVYDISKPSSYENCNHWLTELRENADDNVAVGLIGNKSDL 130
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNGKV 205
+RAV ++A FA++ L F+E SAL +NVD AF L+ IY VSK +++ G+
Sbjct: 131 DHLRAVPTDEAKNFAQENQLLFTETSALKSENVDLAFRELITAIYQMVSKHQVDLGDANT 190
Query: 206 DGPPMLAGSKIDVISGADLEISEMKKLSTCSC 237
G G I + + E KK S +C
Sbjct: 191 QGNAP-KGPTISLTPAPN----ENKKKSANNC 217
>gi|327285863|ref|XP_003227651.1| PREDICTED: ras-related protein Rab-11A-like [Anolis carolinensis]
Length = 236
Score = 224 bits (571), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 106/171 (61%), Positives = 138/171 (80%)
Query: 28 VFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTAGQ 87
+ K+V+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIWDTAGQ
Sbjct: 31 IIKMVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQ 90
Query: 88 ERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDLVD 147
ERYRA+TSAYYRGA+GA++VYDI K ++++V RW++ELR HADS+I I+L+GNKSDL
Sbjct: 91 ERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRH 150
Query: 148 MRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL 198
+RAV ++A FAE GL F E SAL+ NV+ AF +L EIY VS+K++
Sbjct: 151 LRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQM 201
>gi|281342864|gb|EFB18448.1| hypothetical protein PANDA_018338 [Ailuropoda melanoleuca]
Length = 204
Score = 224 bits (571), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 114/196 (58%), Positives = 144/196 (73%), Gaps = 10/196 (5%)
Query: 30 KVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTAGQER 89
KVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIWDTAGQER
Sbjct: 1 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQER 60
Query: 90 YRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDLVDMR 149
YRA+TSAYYRGA+GA++VYDI K ++++V RW++ELR HADS+I I+L+GNKSDL +R
Sbjct: 61 YRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLR 120
Query: 150 AVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL--------ECG 201
AV ++A FAE L F E SAL+ NV+ AF +L EIY VS+K++ G
Sbjct: 121 AVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADRAAHDESPG 180
Query: 202 NGKVD--GPPMLAGSK 215
N VD PP G K
Sbjct: 181 NNVVDISVPPTTDGQK 196
>gi|442750113|gb|JAA67216.1| Putative ras-related protein rab-11a [Ixodes ricinus]
Length = 217
Score = 224 bits (571), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 113/215 (52%), Positives = 153/215 (71%), Gaps = 5/215 (2%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++ K +KAQIW
Sbjct: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDNKTVKAQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+ A++VYDI K ++++V RW++EL+ HAD +I I+L+GNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVXALLVYDIAKHLTYENVERWLKELKDHADQNIVIMLVGNK 125
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
+DL +RAV ++A FAE L F E SAL+ NV+ AF ++L +IY VS+K++
Sbjct: 126 NDLRHLRAVPTDEAKAFAEKNKLSFIETSALDSTNVEAAFHQILTDIYHIVSQKQIR-SE 184
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLSTCSC 237
G D P I I+ D S K +C+C
Sbjct: 185 GDNDPSPSRDNIPI-TIAPTDPTDSRKK---SCAC 215
>gi|393238684|gb|EJD46220.1| ras-domain-containing protein [Auricularia delicata TFB-10046 SS5]
Length = 213
Score = 224 bits (570), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 104/192 (54%), Positives = 147/192 (76%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
DY+FK V++GDS VGK+ +LSRFT+NEF DSKSTIGV+F T+ + ++ K++KAQ+WDTA
Sbjct: 8 DYLFKTVIVGDSGVGKTNMLSRFTRNEFSIDSKSTIGVDFATKYINVDNKVVKAQLWDTA 67
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQ+RYRA+T+AYYRGA+GA++VYDIT+R ++D++ RW++ELR AD++ I+L+GNKSDL
Sbjct: 68 GQDRYRAITAAYYRGAVGALLVYDITRRGTYDNLLRWLKELRDFADTNAVIMLVGNKSDL 127
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNGKV 205
+RAVS E+A F+ + GL F E SAL+ NVD AF ++ +I+ VS ++LE +V
Sbjct: 128 KHIRAVSTEEAAAFSAEHGLSFLETSALDSSNVDEAFNTVVNDIFKIVSAQQLERSENEV 187
Query: 206 DGPPMLAGSKID 217
P A KID
Sbjct: 188 SAPGAGAPIKID 199
>gi|168056370|ref|XP_001780193.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162668343|gb|EDQ54952.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 216
Score = 224 bits (570), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 103/173 (59%), Positives = 143/173 (82%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
DY+FKVV+IGDSAVGKS +LSR+ +NEF +SK+TIGVEFQT+++ I+GK IKAQIWDTA
Sbjct: 10 DYLFKVVLIGDSAVGKSNLLSRYARNEFNLNSKATIGVEFQTQSMEIDGKEIKAQIWDTA 69
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQER+RAVTSAYYRGA+GA++VYDI+++ +FD+V RW++ELR H+D+S+ ++L+GNK DL
Sbjct: 70 GQERFRAVTSAYYRGAVGALIVYDISRKGTFDNVGRWLDELRVHSDASVVVMLVGNKCDL 129
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL 198
++R VS E+A A+++ + F E SA++ NV AF +++EIY VSKK L
Sbjct: 130 DNIREVSQEEATLLAQNEKMSFIETSAMDATNVTNAFQSVVKEIYRVVSKKPL 182
>gi|15231462|ref|NP_187397.1| RAB GTPase-like protein A5B [Arabidopsis thaliana]
gi|75337573|sp|Q9SRS5.1|RAA5B_ARATH RecName: Full=Ras-related protein RABA5b; Short=AtRABA5b
gi|6041856|gb|AAF02165.1|AC009853_25 putative GTP-binding protein [Arabidopsis thaliana]
gi|18253019|gb|AAL62436.1| putative GTP-binding protein [Arabidopsis thaliana]
gi|25084141|gb|AAN72184.1| putative GTP-binding protein [Arabidopsis thaliana]
gi|332641018|gb|AEE74539.1| RAB GTPase-like protein A5B [Arabidopsis thaliana]
Length = 217
Score = 224 bits (570), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 111/211 (52%), Positives = 155/211 (73%), Gaps = 4/211 (1%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
+Y+FK+V+IGDSAVGKS +LSRF+++EF +SK+TIGVEFQT+ V I GK +KAQIWDTA
Sbjct: 10 EYLFKIVLIGDSAVGKSNLLSRFSRDEFDTNSKATIGVEFQTQLVEIEGKEVKAQIWDTA 69
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQER+RAVTSAYYRGA GA++VYDIT+ +F+ V RW++EL H D+++ +L+GNK DL
Sbjct: 70 GQERFRAVTSAYYRGAFGALIVYDITRGDTFESVKRWLQELNTHCDTAVAQMLVGNKCDL 129
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNGKV 205
D+RAVS E+ AE++GLFF E SAL+ NVD AF +++EI+ VS+K L K
Sbjct: 130 EDIRAVSVEEGKALAEEEGLFFMETSALDATNVDKAFEIVIREIFNNVSRKLLNSDAYKA 189
Query: 206 DGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
+ L+ +++ +++ D S + S CS
Sbjct: 190 E----LSVNRVSLVNNQDGSESSWRNPSCCS 216
>gi|359806412|ref|NP_001240985.1| ras-related protein RABA5b-like [Glycine max]
gi|345651732|gb|AEO14876.1| rfls8 protein [Glycine max]
Length = 213
Score = 224 bits (570), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 109/197 (55%), Positives = 152/197 (77%), Gaps = 4/197 (2%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
+Y+FK+V+IGDSAVGKS +LSRF +NEF +SK+TIGVEFQT+ V I+GK IKAQIWDTA
Sbjct: 10 EYLFKIVLIGDSAVGKSNLLSRFARNEFDSNSKATIGVEFQTQLVEIDGKEIKAQIWDTA 69
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQER+RAVTSAYYRGA+GA+VVYDI++R +FD + RW++EL DS++ +L+GNK DL
Sbjct: 70 GQERFRAVTSAYYRGAVGALVVYDISRRGTFDSIKRWLQELTTQNDSTVARMLVGNKCDL 129
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNGKV 205
++R VS E+ AE++GLFF E SAL+ NV TAF +++EIY +S+K L + K
Sbjct: 130 ENIREVSTEEGKSLAEEEGLFFMETSALDATNVQTAFEIVIREIYNNISRKVLNSDSYKA 189
Query: 206 DGPPMLAGSKIDVISGA 222
+ L+ +++ +++GA
Sbjct: 190 E----LSVNRVSLVNGA 202
>gi|2463536|dbj|BAA22522.1| GTP binding protein [Rattus norvegicus]
Length = 218
Score = 224 bits (570), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 118/204 (57%), Positives = 150/204 (73%), Gaps = 12/204 (5%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIW
Sbjct: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI K ++++V RW++ELR HADS+I I+L+GNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVILLVGNK 125
Query: 143 SDLVDMRAVSA-EDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL--- 198
SDL +RAV +A FAE + L F E SAL+ NV+ AF +L EIY VS+K++
Sbjct: 126 SDLRHLRAVCPLTEARAFAE-RHLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADR 184
Query: 199 -----ECGNGKVD--GPPMLAGSK 215
GN VD PP G K
Sbjct: 185 AAHDESPGNNVVDISVPPTTDGQK 208
>gi|302308393|ref|NP_985289.2| AER434Cp [Ashbya gossypii ATCC 10895]
gi|299789434|gb|AAS53113.2| AER434Cp [Ashbya gossypii ATCC 10895]
gi|374108515|gb|AEY97422.1| FAER434Cp [Ashbya gossypii FDAG1]
Length = 219
Score = 224 bits (570), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 110/214 (51%), Positives = 152/214 (71%), Gaps = 10/214 (4%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
DY+FK+V+IGDS VGKS +LSRFT +EF +SKSTIGVEF TRT+ + GK +KAQIWDTA
Sbjct: 12 DYLFKIVLIGDSGVGKSNLLSRFTTDEFNVNSKSTIGVEFATRTIEVEGKKVKAQIWDTA 71
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQERYRA+TSAYYRGA+GA++VYDI+K S+++ W+ ELR +AD ++ + LIGNKSDL
Sbjct: 72 GQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLTELRENADENVAVGLIGNKSDL 131
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELEC----G 201
+RAV ++A +A++ + F+E SALN +NVD AF L+ IY VSK +++ G
Sbjct: 132 AHLRAVPTDEAKNYAQENQMLFTETSALNAENVDLAFRELITAIYQMVSKNQVDLSENNG 191
Query: 202 NGKVDGPPMLAGSKIDVISGADLEISEMKKLSTC 235
+G V P ++ ++ A E S+ K + C
Sbjct: 192 SGTVPRGPTIS------LAPAPSEKSKKKTNNCC 219
>gi|148908929|gb|ABR17569.1| unknown [Picea sitchensis]
Length = 217
Score = 224 bits (570), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 110/213 (51%), Positives = 156/213 (73%), Gaps = 6/213 (2%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
DY+FKVV+IGDSAVGKS +LSR+ +NEF +SK+TIGVEFQT+++ +GK IKAQIWDTA
Sbjct: 8 DYLFKVVLIGDSAVGKSNLLSRYARNEFHMNSKATIGVEFQTQSMEFDGKEIKAQIWDTA 67
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQER+RAVTSAYYRGA+GA+VVYDI++R +F+ V RW++EL+ H+D +I +L+GNK DL
Sbjct: 68 GQERFRAVTSAYYRGAVGALVVYDISRRHTFESVGRWLDELKMHSDMNIVTMLVGNKCDL 127
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNGKV 205
+R V E++ AE + LFF E SALN NV+ AF +++E+Y +S+K L + K
Sbjct: 128 ETLREVPIEESKALAEAEKLFFIETSALNATNVNDAFQIVIKEVYNNMSRKALNSDSYK- 186
Query: 206 DGPPMLAG--SKIDVISGADLEI-SEMKKLSTC 235
P +L+ +K+ ++ D + +KK + C
Sbjct: 187 --PKLLSNRSTKVSLVPNGDAATKTGLKKYACC 217
>gi|432958666|ref|XP_004086097.1| PREDICTED: ras-related protein Rab-11A-like isoform 2 [Oryzias
latipes]
Length = 210
Score = 224 bits (570), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 106/166 (63%), Positives = 136/166 (81%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK +KAQIW
Sbjct: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTVKAQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI K ++++V RW++ELR HADS+I I+L+GNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNK 125
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQE 188
SDL +RAV ++A FAE GL F E SAL+ NV+TAF +L E
Sbjct: 126 SDLRHLRAVPTDEARAFAEKNGLSFLETSALDSTNVETAFQTILTE 171
>gi|212723946|ref|NP_001131951.1| uncharacterized protein LOC100193344 [Zea mays]
gi|194693006|gb|ACF80587.1| unknown [Zea mays]
gi|195620812|gb|ACG32236.1| ras-related protein ARA-4 [Zea mays]
gi|414887766|tpg|DAA63780.1| TPA: Ras protein ARA-4 isoform 1 [Zea mays]
gi|414887767|tpg|DAA63781.1| TPA: Ras protein ARA-4 isoform 2 [Zea mays]
Length = 222
Score = 224 bits (570), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 109/196 (55%), Positives = 144/196 (73%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
DY+FK+V+IGDS+VGKS +L+RF +NEF+ +SKSTIGVEFQT+ + I+GK IKAQIWDTA
Sbjct: 12 DYLFKIVLIGDSSVGKSNLLARFARNEFYPNSKSTIGVEFQTQKLVIDGKEIKAQIWDTA 71
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQER+RAVTSAYYRGA+GA++VYDI++RQ+FD V RW+ EL H+D ++ IL+GNK+DL
Sbjct: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSVGRWLNELHNHSDMNVVTILVGNKTDL 131
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNGKV 205
R VS + AE QGLFF E SAL+ NV AF +++EIY +S+K + K
Sbjct: 132 KHAREVSTAEGQALAEAQGLFFMETSALDSSNVAAAFQTVVKEIYSILSRKVFQSLEQKK 191
Query: 206 DGPPMLAGSKIDVISG 221
L+ K V+ G
Sbjct: 192 SELQSLSSGKAVVLQG 207
>gi|119389963|pdb|2HV8|A Chain A, Crystal Structure Of Gtp-Bound Rab11 In Complex With Fip3
gi|119389965|pdb|2HV8|B Chain B, Crystal Structure Of Gtp-Bound Rab11 In Complex With Fip3
gi|119389967|pdb|2HV8|C Chain C, Crystal Structure Of Gtp-Bound Rab11 In Complex With Fip3
Length = 172
Score = 224 bits (570), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 107/169 (63%), Positives = 136/169 (80%)
Query: 22 PDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQI 81
D+ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQI
Sbjct: 2 SDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 61
Query: 82 WDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGN 141
WDTAG ERYRA+TSAYYRGA+GA++VYDI K ++++V RW++ELR HADS+I I+L+GN
Sbjct: 62 WDTAGLERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 121
Query: 142 KSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIY 190
KSDL +RAV ++A FAE GL F E SAL+ NV+ AF +L EIY
Sbjct: 122 KSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIY 170
>gi|121703301|ref|XP_001269915.1| Ras GTPase Rab11, putative [Aspergillus clavatus NRRL 1]
gi|119398058|gb|EAW08489.1| Ras GTPase Rab11, putative [Aspergillus clavatus NRRL 1]
Length = 230
Score = 224 bits (570), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 113/195 (57%), Positives = 145/195 (74%), Gaps = 1/195 (0%)
Query: 31 VVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTAGQERY 90
VV+IGDS VGKS +LSRFT+NEF DSKSTIGVEF TR++ ++ K IKAQIWDTAGQERY
Sbjct: 31 VVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDTAGQERY 90
Query: 91 RAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDLVDMRA 150
RA+TSAYYRGA+GA++VYDI+K Q++D+V RW++ELR HADS+I I+L+GNKSDL +RA
Sbjct: 91 RAITSAYYRGAVGALLVYDISKHQTYDNVNRWLKELRDHADSNIVIMLVGNKSDLRHLRA 150
Query: 151 VSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNGKVDGPPM 210
V ++A +FA + L F E SAL+ NV+ AF +L EIY VS K + G G +
Sbjct: 151 VPTDEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKAIIEG-GDSGQATL 209
Query: 211 LAGSKIDVISGADLE 225
+G I+V D E
Sbjct: 210 SSGRTIEVSKTPDTE 224
>gi|89257513|gb|ABD65003.1| Ras-related GTP-binding protein, putative [Brassica oleracea]
Length = 221
Score = 223 bits (569), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 108/194 (55%), Positives = 142/194 (73%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
DY+FK+V+IGDSAVGKS +L+RF ++EF+ +SKSTIGVEFQT+ + INGK IKAQIWDTA
Sbjct: 12 DYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKIVINGKEIKAQIWDTA 71
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQER+RAVTSAYYRGA+GA++VYDI++ Q+F + RW+ EL H+D ++ IL+GNKSDL
Sbjct: 72 GQERFRAVTSAYYRGAVGALLVYDISRVQTFQSIGRWLNELHTHSDMNVVTILVGNKSDL 131
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNGKV 205
D+R V + AE QGLFF E SAL+ NV AF +++EIY +S+K +
Sbjct: 132 KDIREVPTSEGKALAEAQGLFFMETSALDSSNVAAAFETVVKEIYNILSRKVMTSQELNK 191
Query: 206 DGPPMLAGSKIDVI 219
P L+ K VI
Sbjct: 192 QDPASLSNGKKVVI 205
>gi|242046428|ref|XP_002461085.1| hypothetical protein SORBIDRAFT_02g040430 [Sorghum bicolor]
gi|241924462|gb|EER97606.1| hypothetical protein SORBIDRAFT_02g040430 [Sorghum bicolor]
Length = 222
Score = 223 bits (569), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 108/196 (55%), Positives = 144/196 (73%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
DY+FK+V++GDS+VGKS +L+RF +NEF+ +SKSTIGVEFQT+ + I+GK IKAQIWDTA
Sbjct: 12 DYLFKIVLLGDSSVGKSNLLARFARNEFYPNSKSTIGVEFQTQKLVIDGKEIKAQIWDTA 71
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQER+RAVTSAYYRGA+GA++VYDI++RQ+FD V RW+ EL H+D ++ IL+GNK+DL
Sbjct: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSVGRWLNELHTHSDMNVVTILVGNKTDL 131
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNGKV 205
R VS + AE QGLFF E SAL+ NV AF +++EIY +S+K + K
Sbjct: 132 KHAREVSTAEGQALAEAQGLFFMETSALDSSNVAAAFQTVVKEIYSILSRKVFQSLEQKK 191
Query: 206 DGPPMLAGSKIDVISG 221
L+ K V+ G
Sbjct: 192 SELQSLSNGKAVVLQG 207
>gi|162464222|ref|NP_001105299.1| small GTP binding protein1 [Zea mays]
gi|1020092|dbj|BAA06701.1| mgp1 GTP-binding protein [Zea mays]
Length = 211
Score = 223 bits (569), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 116/202 (57%), Positives = 147/202 (72%), Gaps = 5/202 (2%)
Query: 24 KIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWD 83
+IDYVFK+VVIGD AVGKSQ+LS F +NEF DSK TIGVEF TR++ K++KAQIWD
Sbjct: 9 RIDYVFKIVVIGDDAVGKSQLLSGFARNEFSLDSKGTIGVEFATRSIRFEDKVVKAQIWD 68
Query: 84 TAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKS 143
TAGQERY A+TSAYYRGA GA++VYD+T+ +F+ V RW++ELR H DS+I I+L+GNK+
Sbjct: 69 TAGQERYLAITSAYYRGAAGALLVYDVTRHATFETVGRWLKELRDHTDSNIVIMLVGNKA 128
Query: 144 DLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNG 203
DL +RAVS EDA FAE + +FF E SA + NV T+F LL +IY +SKK L +
Sbjct: 129 DLRHLRAVSTEDAKAFAEKESIFFMETSAQD-TNVKTSFETLLTDIYRILSKKSL-VADT 186
Query: 204 KVDG---PPMLAGSKIDVISGA 222
VD +L G+KI V G
Sbjct: 187 YVDSLTVARLLGGTKISVGPGG 208
>gi|405960755|gb|EKC26640.1| Ras-related protein Rab-11A [Crassostrea gigas]
Length = 209
Score = 223 bits (569), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 105/170 (61%), Positives = 138/170 (81%)
Query: 29 FKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTAGQE 88
F++V+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIWDTAGQE
Sbjct: 5 FELVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQE 64
Query: 89 RYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDLVDM 148
RYRA+TSAYYRGA+GA++VYDI K ++++V RW++ELR HAD++I I+L+GNKSDL +
Sbjct: 65 RYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDLRHL 124
Query: 149 RAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL 198
RAV ++A FAE L F E SAL+ NV+TAF +L EIY VS+K++
Sbjct: 125 RAVPTDEAKAFAEKNNLSFIETSALDSTNVETAFQNILTEIYKIVSQKQI 174
>gi|363748106|ref|XP_003644271.1| hypothetical protein Ecym_1207 [Eremothecium cymbalariae
DBVPG#7215]
gi|356887903|gb|AET37454.1| hypothetical protein Ecym_1207 [Eremothecium cymbalariae
DBVPG#7215]
Length = 217
Score = 223 bits (569), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 109/210 (51%), Positives = 149/210 (70%), Gaps = 4/210 (1%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
DY+FK+V+IGDS VGKS +LSRFT +EF +SKSTIGVEF TRT+ + GK +KAQIWDTA
Sbjct: 11 DYLFKIVLIGDSGVGKSNLLSRFTTDEFNVNSKSTIGVEFATRTIEVEGKKVKAQIWDTA 70
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQERYRA+TSAYYRGA+GA++VYDI+K S+++ W+ ELR +AD ++ + LIGNKSDL
Sbjct: 71 GQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLAELRENADENVAVGLIGNKSDL 130
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNGKV 205
+RAV ++A +A++ + F+E SALN +NVD AF L+ IY VSK +++ K
Sbjct: 131 AHLRAVPTDEAKNYAQENQMLFTETSALNAENVDLAFRELITAIYQMVSKNQVDLSE-KS 189
Query: 206 DGPPMLAGSKIDVISGADLEISEMKKLSTC 235
G M G I + ++ + KK + C
Sbjct: 190 GGGTMPRGPTISLTPASN---EKTKKSNNC 216
>gi|302309967|ref|XP_451560.2| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|199424819|emb|CAH01953.2| KLLA0B00671p [Kluyveromyces lactis]
Length = 219
Score = 223 bits (569), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 109/212 (51%), Positives = 146/212 (68%), Gaps = 4/212 (1%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
D++FK+V+IGDS VGKS +LSRFT NEF DSK+TIGVEF TRT+ + GK IKAQIWDTA
Sbjct: 11 DFLFKIVLIGDSGVGKSNLLSRFTANEFNLDSKTTIGVEFATRTIEVEGKKIKAQIWDTA 70
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQERYRA+T+AYYR A+GA++VYDITK S+++ W+ EL+ +AD ++ + LIGNKSDL
Sbjct: 71 GQERYRAITTAYYRAAVGALIVYDITKSSSYENCNHWLAELKQNADENVAVGLIGNKSDL 130
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNGKV 205
RAV ++A +A++ L F+E SALN DNVD AF L+ IY +SK +L+ +
Sbjct: 131 DHKRAVPTDEARNYAQENQLLFTETSALNADNVDEAFRALITAIYQMISKNQLDLNDASG 190
Query: 206 DGPPMLAGSKIDVISGADLEISEMKKLSTCSC 237
+ G I + + E K ST +C
Sbjct: 191 NNANAPKGPTISLTPAPN----EKHKKSTNNC 218
>gi|168001170|ref|XP_001753288.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162695574|gb|EDQ81917.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 216
Score = 223 bits (569), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 103/173 (59%), Positives = 142/173 (82%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
DY+FKVV+IGDSAVGKS +LSR+ +NEF +SK+TIGVEFQT+++ I GK IKAQIWDTA
Sbjct: 10 DYLFKVVLIGDSAVGKSNLLSRYARNEFNLNSKATIGVEFQTQSMEIGGKEIKAQIWDTA 69
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQER+RAVTSAYYRGA+GA++VYDI++R +F++V RW++ELR H+D+S+ ++L+GNK DL
Sbjct: 70 GQERFRAVTSAYYRGAVGALIVYDISRRGTFENVGRWLDELRVHSDASVVVMLVGNKCDL 129
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL 198
++R VS E+A A+++ + F E SA++ NV AF +++EIY VSKK L
Sbjct: 130 DNIREVSQEEATLLAQNEKMSFIETSAMDATNVTNAFQSVVKEIYRVVSKKPL 182
>gi|414873861|tpg|DAA52418.1| TPA: hypothetical protein ZEAMMB73_441203 [Zea mays]
Length = 234
Score = 223 bits (569), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 123/243 (50%), Positives = 151/243 (62%), Gaps = 21/243 (8%)
Query: 5 MSGDATDHRHQQQENMIPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVE 64
MSG R + D DY+FKVV++GDS VGKS +LSRFT+N F DSKSTIGVE
Sbjct: 1 MSG-----RRPATWDQAADDYDYLFKVVLVGDSGVGKSNLLSRFTRNAFSLDSKSTIGVE 55
Query: 65 FQTRTVTINGKIIKAQIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVE 124
F TRT+ ++GK IKAQIWDTAGQERYRA+TSAYYRGA GA++VYD+T+ +F+ ARW+
Sbjct: 56 FATRTIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAAGALLVYDVTRADTFESAARWLR 115
Query: 125 ELRAHADS-SIRIILIGNKSDLV---------DMRAVSAEDAVEFAEDQGLFFSEASALN 174
ELR HAD ++L+GNK+DL RAV DA AE +GL F E SAL+
Sbjct: 116 ELRDHADGRGAAVMLVGNKTDLARSGSRSRHHHPRAVPRGDAAALAEREGLSFVETSALD 175
Query: 175 GDNVDTAFFRLLQEIYGAVSKKELECGNGKVDGPPMLAGSKIDVISGADLEISEMKKLST 234
NVD AF LL EIY AVS+K L + D + G I V S+ L+T
Sbjct: 176 ATNVDAAFETLLTEIYRAVSRKALAASSAGDDAGAVGEGQAIQV------SASDSAGLTT 229
Query: 235 CSC 237
C
Sbjct: 230 RCC 232
>gi|294943805|ref|XP_002783965.1| Rab11, putative [Perkinsus marinus ATCC 50983]
gi|239896947|gb|EER15761.1| Rab11, putative [Perkinsus marinus ATCC 50983]
Length = 228
Score = 223 bits (569), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 108/185 (58%), Positives = 138/185 (74%), Gaps = 1/185 (0%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
DY+FKVV+IGDS VGKS ILSRFT+ EF +S+STIGVEF T++V I K++KAQIWDTA
Sbjct: 13 DYLFKVVLIGDSGVGKSNILSRFTRGEFNLESRSTIGVEFATKSVRIGSKVVKAQIWDTA 72
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQERYRA+TSAYYRGA+GA++VYDI+KR SF++ ARW++ELR HADS I ++L+GNK DL
Sbjct: 73 GQERYRAITSAYYRGAVGALLVYDISKRSSFENAARWLKELREHADSDIVVMLVGNKCDL 132
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNGKV 205
+RAV ++A +F D L F E SAL NV+ AF +L++IY S K G
Sbjct: 133 SHLRAVEEDEAKKFCTDNDLLFIETSALEATNVEEAFQEILEDIYKVNSSKPTPLRAG-A 191
Query: 206 DGPPM 210
D P +
Sbjct: 192 DTPSI 196
>gi|161761229|pdb|3BFK|A Chain A, Crystal Structure Of Plasmodium Falciparum Rab11a In
Complex With Gdp
gi|161761230|pdb|3BFK|B Chain B, Crystal Structure Of Plasmodium Falciparum Rab11a In
Complex With Gdp
gi|161761231|pdb|3BFK|C Chain C, Crystal Structure Of Plasmodium Falciparum Rab11a In
Complex With Gdp
gi|161761232|pdb|3BFK|D Chain D, Crystal Structure Of Plasmodium Falciparum Rab11a In
Complex With Gdp
gi|161761233|pdb|3BFK|E Chain E, Crystal Structure Of Plasmodium Falciparum Rab11a In
Complex With Gdp
Length = 181
Score = 223 bits (569), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 105/176 (59%), Positives = 141/176 (80%), Gaps = 1/176 (0%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTI-NGKIIKAQI 81
D DY+FK+V+IGDS VGKS +LSRFT++EF +SKSTIGVEF T+++ + N KIIKAQI
Sbjct: 2 DYYDYLFKIVLIGDSGVGKSNLLSRFTRDEFNLESKSTIGVEFATKSIQLKNNKIIKAQI 61
Query: 82 WDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGN 141
WDTAGQERYRA+TSAYYRGA+GA++VYDITK+ SF+++ +W++ELR +ADS+I I+L+GN
Sbjct: 62 WDTAGQERYRAITSAYYRGAVGALLVYDITKKNSFENIEKWLKELRDNADSNIVILLVGN 121
Query: 142 KSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKE 197
KSDL +R ++ DA ++A+ + L F E SAL NV+ AF +LL EIY KK+
Sbjct: 122 KSDLKHLRVINDNDATQYAKKEKLAFIETSALEATNVELAFHQLLNEIYNVRQKKQ 177
>gi|294874898|ref|XP_002767142.1| Rab11, putative [Perkinsus marinus ATCC 50983]
gi|239868591|gb|EEQ99859.1| Rab11, putative [Perkinsus marinus ATCC 50983]
Length = 228
Score = 223 bits (569), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 108/185 (58%), Positives = 138/185 (74%), Gaps = 1/185 (0%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
DY+FKVV+IGDS VGKS ILSRFT+ EF +S+STIGVEF T++V I K++KAQIWDTA
Sbjct: 13 DYLFKVVLIGDSGVGKSNILSRFTRGEFNLESRSTIGVEFATKSVRIGSKVVKAQIWDTA 72
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQERYRA+TSAYYRGA+GA++VYDI+KR SF++ ARW++ELR HADS I ++L+GNK DL
Sbjct: 73 GQERYRAITSAYYRGAVGALLVYDISKRSSFENAARWLKELREHADSDIVVMLVGNKCDL 132
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNGKV 205
+RAV ++A +F D L F E SAL NV+ AF +L++IY S K G
Sbjct: 133 SHLRAVEEDEAKKFCTDNDLLFIETSALEATNVEEAFQEILEDIYKVNSSKPTPLRAG-A 191
Query: 206 DGPPM 210
D P +
Sbjct: 192 DTPSI 196
>gi|224065032|ref|XP_002301639.1| predicted protein [Populus trichocarpa]
gi|222843365|gb|EEE80912.1| predicted protein [Populus trichocarpa]
Length = 217
Score = 223 bits (569), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 102/173 (58%), Positives = 141/173 (81%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
+Y+FK+V+IGDSAVGKS +LSR+ +NEF SK+TIGVEFQT+++ I+GK +KAQIWDTA
Sbjct: 10 EYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQSMEIDGKEVKAQIWDTA 69
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQER+RAVTSAYYRGA+GA++VYDI++R +FD V RW++EL+ H+D+++ ++L+GNK DL
Sbjct: 70 GQERFRAVTSAYYRGAVGALIVYDISRRTTFDSVGRWLDELKTHSDTTVAMMLVGNKCDL 129
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL 198
++R VS E+ AE +GLFF E SAL+ NV AF +++EIY VS+K L
Sbjct: 130 ENIRDVSVEEGKSLAEAEGLFFMETSALDSTNVKKAFEIVIREIYNNVSRKVL 182
>gi|50292391|ref|XP_448628.1| hypothetical protein [Candida glabrata CBS 138]
gi|49527940|emb|CAG61591.1| unnamed protein product [Candida glabrata]
Length = 221
Score = 223 bits (568), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 108/191 (56%), Positives = 143/191 (74%), Gaps = 6/191 (3%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
DY+FK+V+IGDS VGKS +LSRFT NEF +SKSTIGVEF TRT+ + K IKAQIWDTA
Sbjct: 12 DYLFKIVLIGDSGVGKSNLLSRFTTNEFNLESKSTIGVEFATRTIKVEDKKIKAQIWDTA 71
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQERYRA+TSAYYRGA+GA++VYDI+K ++++ W+ EL+ +AD ++ I LIGNKSDL
Sbjct: 72 GQERYRAITSAYYRGAVGALIVYDISKSGTYENCNHWLTELKENADDNVAIGLIGNKSDL 131
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECG---- 201
+RAV E+A FA + LFF+E SALN +NVD AF L+++IY V+K +++ G
Sbjct: 132 EHLRAVPTEEARGFASENQLFFTETSALNSENVDLAFRELIEQIYKMVNKHQVDLGENAK 191
Query: 202 --NGKVDGPPM 210
+G GP +
Sbjct: 192 GSSGAPKGPTI 202
>gi|326493914|dbj|BAJ85419.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 219
Score = 223 bits (568), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 103/173 (59%), Positives = 141/173 (81%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
+Y+FKVV+IGDSAVGKS +LSR+ +NEF SK+TIGVEFQT+++ I+GK +KAQIWDTA
Sbjct: 13 EYLFKVVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQSMDIDGKEVKAQIWDTA 72
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQER+RAVTSAYYRGA GA++VYDI++R +FD+V RW++EL H+D+++ +L+GNK DL
Sbjct: 73 GQERFRAVTSAYYRGAFGALLVYDISRRGTFDNVGRWLQELNTHSDTTVAKMLVGNKCDL 132
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL 198
++R V E+ AE +GLFF E SAL+ NV+TAF +++EIY +VS+K L
Sbjct: 133 DNIREVPVEEGKALAESEGLFFMETSALDSTNVNTAFELVIKEIYNSVSRKIL 185
>gi|334314719|ref|XP_003340079.1| PREDICTED: ras-related protein Rab-11A-like isoform 2 [Monodelphis
domestica]
Length = 205
Score = 223 bits (568), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 106/168 (63%), Positives = 136/168 (80%)
Query: 31 VVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTAGQERY 90
VV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIWDTAGQERY
Sbjct: 3 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERY 62
Query: 91 RAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDLVDMRA 150
RA+TSAYYRGA+GA++VYDI K ++++V RW++ELR HADS+I I+L+GNKSDL +RA
Sbjct: 63 RAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRA 122
Query: 151 VSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL 198
V ++A FAE GL F E SAL+ NV+ AF +L EIY VS+K++
Sbjct: 123 VPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQM 170
>gi|334326820|ref|XP_001376337.2| PREDICTED: ras-related protein Rab-11B-like [Monodelphis domestica]
Length = 218
Score = 223 bits (568), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 113/201 (56%), Positives = 145/201 (72%), Gaps = 10/201 (4%)
Query: 25 IDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDT 84
I + K V+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIWDT
Sbjct: 8 ISLICKFVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 67
Query: 85 AGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSD 144
AGQERYRA+TSAYYRGA+GA++VYDI K ++++V RW++ELR HAD++I I+L+GNKSD
Sbjct: 68 AGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSD 127
Query: 145 LVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL------ 198
L +RAV ++A FAE L F E SAL+ NV+ AF +L EIY VS+K++
Sbjct: 128 LRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADRSAH 187
Query: 199 --ECGNGKVD--GPPMLAGSK 215
GN VD PP G K
Sbjct: 188 DESPGNNVVDISVPPTTDGQK 208
>gi|297826611|ref|XP_002881188.1| hypothetical protein ARALYDRAFT_902201 [Arabidopsis lyrata subsp.
lyrata]
gi|297327027|gb|EFH57447.1| hypothetical protein ARALYDRAFT_902201 [Arabidopsis lyrata subsp.
lyrata]
Length = 219
Score = 223 bits (568), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 103/173 (59%), Positives = 140/173 (80%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
+Y+FK+V+IGDSAVGKS +LSR+ +NEF SK+TIGVEFQT+ + I GK +KAQIWDTA
Sbjct: 10 EYLFKIVIIGDSAVGKSNLLSRYARNEFNAHSKATIGVEFQTQNMEIEGKEVKAQIWDTA 69
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQER+RAVTSAYYRGA+GA+VVYDI++R +F+ V RW++EL+ H+D+++ +L+GNK DL
Sbjct: 70 GQERFRAVTSAYYRGAVGALVVYDISRRSTFESVGRWLDELKTHSDTTVARMLVGNKCDL 129
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL 198
+RAVS E+ AE +GLFF E SAL+ NV TAF ++++IY VS+K+L
Sbjct: 130 ESIRAVSVEEGKALAETEGLFFMETSALDSTNVKTAFEMVIRDIYTNVSRKQL 182
>gi|224285593|gb|ACN40515.1| unknown [Picea sitchensis]
Length = 217
Score = 223 bits (568), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 110/213 (51%), Positives = 156/213 (73%), Gaps = 6/213 (2%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
DY+FKVV+IGDSAVGKS +LSR+ +NEF +SK+TIGVEFQT+++ +GK IKAQIWDTA
Sbjct: 8 DYLFKVVLIGDSAVGKSNLLSRYARNEFHMNSKATIGVEFQTQSMEFDGKEIKAQIWDTA 67
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQER+RAVTSAYYRGA+GA+VVYDI++R +F+ V RW++EL+ H+D +I +L+GNK DL
Sbjct: 68 GQERFRAVTSAYYRGAVGALVVYDISRRHTFESVGRWLDELKMHSDMNIVTMLVGNKCDL 127
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNGKV 205
+R V E++ AE + LFF E SALN NV+ AF +++E+Y +S+K L + K
Sbjct: 128 ETLREVPIEESKALAEAEKLFFIETSALNATNVNDAFQIVIKEVYNNMSRKALNSDSYK- 186
Query: 206 DGPPMLAG--SKIDVISGADLEI-SEMKKLSTC 235
+L+ +K+ ++ D +E+KK + C
Sbjct: 187 --SKLLSNRSTKVSLVPNGDAATKTELKKYACC 217
>gi|449266278|gb|EMC77353.1| Ras-related protein Rab-11A, partial [Columba livia]
Length = 203
Score = 223 bits (568), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 106/168 (63%), Positives = 136/168 (80%)
Query: 31 VVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTAGQERY 90
VV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIWDTAGQERY
Sbjct: 1 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERY 60
Query: 91 RAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDLVDMRA 150
RA+TSAYYRGA+GA++VYDI K ++++V RW++ELR HADS+I I+L+GNKSDL +RA
Sbjct: 61 RAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRA 120
Query: 151 VSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL 198
V ++A FAE GL F E SAL+ NV+ AF +L EIY VS+K++
Sbjct: 121 VPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQM 168
>gi|444318297|ref|XP_004179806.1| hypothetical protein TBLA_0C04910 [Tetrapisispora blattae CBS 6284]
gi|387512847|emb|CCH60287.1| hypothetical protein TBLA_0C04910 [Tetrapisispora blattae CBS 6284]
Length = 231
Score = 223 bits (568), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 105/174 (60%), Positives = 135/174 (77%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
DY+FK+V+IGDS VGKS +LSRFT NEF +SKSTIGVEF TRT+ + GK IKAQIWDTA
Sbjct: 11 DYLFKIVLIGDSGVGKSNLLSRFTTNEFNLESKSTIGVEFATRTIEVEGKKIKAQIWDTA 70
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQERYRA+TSAYYRGA+GA++VYDI+K S+++ W+ ELR +AD+++ + LIGNKSDL
Sbjct: 71 GQERYRAITSAYYRGAVGALIVYDISKPSSYENCQHWLTELRGNADANVAVGLIGNKSDL 130
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELE 199
MRAV ++A FA++ L F+E SAL NVD AF L+ IY VSK +++
Sbjct: 131 DHMRAVPTDEAKNFAQENQLLFTETSALQSSNVDQAFRELITAIYQMVSKHQVD 184
>gi|255572910|ref|XP_002527386.1| protein with unknown function [Ricinus communis]
gi|223533238|gb|EEF34993.1| protein with unknown function [Ricinus communis]
Length = 218
Score = 223 bits (567), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 106/210 (50%), Positives = 155/210 (73%), Gaps = 4/210 (1%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
+Y+FK+V+IGDSAVGKS +LSR+ +NEF SK+TIGVEFQT+++ I+GK +KAQIWDTA
Sbjct: 10 EYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQSMEIDGKEVKAQIWDTA 69
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQER+RAVTSAYYRGA+GA++VYDI++R +FD V RW++EL+ H+D+++ +L+GNK DL
Sbjct: 70 GQERFRAVTSAYYRGAVGALIVYDISRRTTFDSVGRWLDELKTHSDTTVARMLVGNKCDL 129
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNGKV 205
++R V+ E+ AE +GLFF E SAL+ NV AF +++EIY VS+K L K
Sbjct: 130 ENIRDVTVEEGKSLAEAEGLFFMETSALDSTNVKKAFEIVIREIYNNVSRKVLNSDTYKA 189
Query: 206 DGPPMLAGSKIDVISGADLEISEMKKLSTC 235
+ L+ +++ +++ +D S+C
Sbjct: 190 E----LSLNRVTLVNNSDGSKQSQSYFSSC 215
>gi|440804360|gb|ELR25237.1| RAB11B protein, putative [Acanthamoeba castellanii str. Neff]
Length = 213
Score = 223 bits (567), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 109/178 (61%), Positives = 140/178 (78%), Gaps = 1/178 (0%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGKS +LSRFT+N+F +SKSTIGVEF TR++ + K IKAQIW
Sbjct: 5 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATRSIKCDSKTIKAQIW 64
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI+K ++++V RW+ ELR HADS+I I+L+GNK
Sbjct: 65 DTAGQERYRAITSAYYRGAVGALLVYDISKAVTYENVERWLNELRDHADSNIVIMLVGNK 124
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVS-KKELE 199
SDL +RAV E A AE GL F E SAL+ NV+ AF ++L EI+ V+ K+LE
Sbjct: 125 SDLRHLRAVPTEQAAALAEKHGLSFIETSALDSTNVELAFQKILTEIFHIVNGGKQLE 182
>gi|417408648|gb|JAA50866.1| Putative rab subfamily protein of small gtpase, partial [Desmodus
rotundus]
Length = 205
Score = 223 bits (567), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 113/195 (57%), Positives = 143/195 (73%), Gaps = 10/195 (5%)
Query: 31 VVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTAGQERY 90
VV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIWDTAGQERY
Sbjct: 1 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERY 60
Query: 91 RAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDLVDMRA 150
RA+TSAYYRGA+GA++VYDI K ++++V RW++ELR HADS+I I+L+GNKSDL +RA
Sbjct: 61 RAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRA 120
Query: 151 VSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL--------ECGN 202
V ++A FAE L F E SAL+ NV+ AF +L EIY VS+K++ GN
Sbjct: 121 VPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADRAAHDESPGN 180
Query: 203 GKVD--GPPMLAGSK 215
VD PP G K
Sbjct: 181 NVVDISVPPTTDGQK 195
>gi|355755401|gb|EHH59148.1| GTP-binding protein YPT3, partial [Macaca fascicularis]
Length = 213
Score = 223 bits (567), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 113/195 (57%), Positives = 143/195 (73%), Gaps = 10/195 (5%)
Query: 31 VVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTAGQERY 90
VV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIWDTAGQERY
Sbjct: 14 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERY 73
Query: 91 RAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDLVDMRA 150
RA+TSAYYRGA+GA++VYDI K ++++V RW++ELR HADS+I I+L+GNKSDL +RA
Sbjct: 74 RAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRA 133
Query: 151 VSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL--------ECGN 202
V ++A FAE L F E SAL+ NV+ AF +L EIY VS+K++ GN
Sbjct: 134 VPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADRAAHDESPGN 193
Query: 203 GKVD--GPPMLAGSK 215
VD PP G K
Sbjct: 194 NVVDISVPPTTDGQK 208
>gi|67516131|ref|XP_657951.1| hypothetical protein AN0347.2 [Aspergillus nidulans FGSC A4]
gi|40746597|gb|EAA65753.1| hypothetical protein AN0347.2 [Aspergillus nidulans FGSC A4]
Length = 237
Score = 223 bits (567), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 112/202 (55%), Positives = 143/202 (70%), Gaps = 20/202 (9%)
Query: 22 PDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQI 81
P + ++FKVV+IGDS GKS +LSRFT+NEF DSKSTIGVEF TR++ ++ K IKAQI
Sbjct: 10 PRPLTFLFKVVLIGDSGTGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQI 69
Query: 82 WDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGN 141
WDTAGQERYRA+TSAYYRGA+GA++VYDI+K Q++D+V RW++ELR HADS+I I+L+GN
Sbjct: 70 WDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYDNVNRWLKELRDHADSNIVIMLVGN 129
Query: 142 KSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQ-------------- 187
KSDL +RAV E+A +FA + L F E SAL+ NV+ AF +L
Sbjct: 130 KSDLRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTGIAPVGISKRRSLT 189
Query: 188 ------EIYGAVSKKELECGNG 203
EIY VS K LE +G
Sbjct: 190 AILFFVEIYRIVSSKALEGESG 211
>gi|326926865|ref|XP_003209617.1| PREDICTED: ras-related protein Rab-11A-like [Meleagris gallopavo]
Length = 217
Score = 223 bits (567), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 105/168 (62%), Positives = 136/168 (80%)
Query: 31 VVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTAGQERY 90
+V+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIWDTAGQERY
Sbjct: 15 LVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERY 74
Query: 91 RAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDLVDMRA 150
RA+TSAYYRGA+GA++VYDI K ++++V RW++ELR HADS+I I+L+GNKSDL +RA
Sbjct: 75 RAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRA 134
Query: 151 VSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL 198
V ++A FAE GL F E SAL+ NV+ AF +L EIY VS+K++
Sbjct: 135 VPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQM 182
>gi|226493760|ref|NP_001152371.1| ras-related protein ARA-4 [Zea mays]
gi|194698180|gb|ACF83174.1| unknown [Zea mays]
gi|195655655|gb|ACG47295.1| ras-related protein ARA-4 [Zea mays]
gi|414869586|tpg|DAA48143.1| TPA: hypothetical protein ZEAMMB73_561529 [Zea mays]
Length = 216
Score = 223 bits (567), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 105/173 (60%), Positives = 138/173 (79%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
+Y+FKVV+IGDSAVGKS +LSR+ +NEF SK+TIGVEFQT+++ I GK +KAQIWDTA
Sbjct: 11 EYLFKVVIIGDSAVGKSNLLSRYARNEFNPHSKATIGVEFQTQSMAIEGKEVKAQIWDTA 70
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQER+RAVTSAYYRGA GA++VYDIT+R +FD+V RW++EL H+D+++ +L+GNK DL
Sbjct: 71 GQERFRAVTSAYYRGAFGALLVYDITRRSTFDNVGRWLQELNTHSDTTVAKMLVGNKCDL 130
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL 198
D+R V E+ AE +GLFF E SAL+ NV TAF +++EIY VS+K L
Sbjct: 131 GDIRQVPVEEGKALAEAEGLFFMETSALDATNVRTAFEIVIREIYSNVSRKVL 183
>gi|168062057|ref|XP_001783000.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162665517|gb|EDQ52199.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 215
Score = 223 bits (567), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 104/173 (60%), Positives = 142/173 (82%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
DY+FKVV+IGDSAVGKS +LSR+ +NEF +SK+TIGVEFQT+++ I+GK +KAQIWDTA
Sbjct: 10 DYLFKVVLIGDSAVGKSNLLSRYARNEFNSNSKATIGVEFQTQSMEIDGKEVKAQIWDTA 69
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQER+RAVTSAYYRGA+GA++V+DIT+R +F++V+RW++EL+ H+DSS+ ++L+GNKSDL
Sbjct: 70 GQERFRAVTSAYYRGAVGALIVFDITRRGTFENVSRWLDELKVHSDSSVVVMLVGNKSDL 129
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL 198
+R V+ E+A AE+ + F E SAL NV AF +L+EI+ VSKK L
Sbjct: 130 AHIREVTVEEATALAENNAMSFMETSALESVNVAEAFQTVLKEIHKIVSKKAL 182
>gi|114794171|pdb|2GZD|A Chain A, Crystal Structure Of Rab11 In Complex With Rab11-Fip2
gi|114794172|pdb|2GZD|B Chain B, Crystal Structure Of Rab11 In Complex With Rab11-Fip2
gi|114794175|pdb|2GZH|A Chain A, Crystal Structure Of Rab11 In Complex With Rab11-Family
Interacting Protein 2
Length = 173
Score = 223 bits (567), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 107/168 (63%), Positives = 135/168 (80%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIW
Sbjct: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAG ERYRA+TSAYYRGA+GA++VYDI K ++++V RW++ELR HADS+I I L+GNK
Sbjct: 66 DTAGLERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIXLVGNK 125
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIY 190
SDL +RAV ++A FAE GL F E SAL+ NV+ AF +L EIY
Sbjct: 126 SDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIY 173
>gi|302783080|ref|XP_002973313.1| rab family GTPase [Selaginella moellendorffii]
gi|300159066|gb|EFJ25687.1| rab family GTPase [Selaginella moellendorffii]
Length = 221
Score = 223 bits (567), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 102/171 (59%), Positives = 141/171 (82%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
DY+FKVV+IGDSAVGKS +L+R+ +NEF +SK+TIGVEFQT+++ INGK +KAQ+WDTA
Sbjct: 11 DYIFKVVLIGDSAVGKSNLLTRYARNEFNQNSKATIGVEFQTQSMRINGKEVKAQVWDTA 70
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQER+RAVTSAYYRGALGA+VVYDIT++Q+F+++++W++ELR + SS+ +L+GNK DL
Sbjct: 71 GQERFRAVTSAYYRGALGALVVYDITRKQTFENISKWLDELRTYGGSSVVTMLVGNKCDL 130
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKK 196
++R VS E+ E AE + LFF E SAL NV TAF +++EI+ A S++
Sbjct: 131 TNIREVSVEEGKELAESENLFFMETSALASTNVKTAFQNVVREIFDAKSRR 181
>gi|115477389|ref|NP_001062290.1| Os08g0525000 [Oryza sativa Japonica Group]
gi|29647488|dbj|BAC75417.1| putative GTP-binding protein(RAB11G) [Oryza sativa Japonica Group]
gi|113624259|dbj|BAF24204.1| Os08g0525000 [Oryza sativa Japonica Group]
gi|215737031|dbj|BAG95960.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 216
Score = 223 bits (567), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 104/173 (60%), Positives = 139/173 (80%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
+Y+FKVV+IGDSAVGKS +LSR+ +NEF SK+TIGVEFQT+++ INGK +KAQIWDTA
Sbjct: 11 EYLFKVVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQSMDINGKDVKAQIWDTA 70
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQER+RAVTSAYYRGA GA++VYDI++R +FD+V RW++EL H+D+++ +L+GNK DL
Sbjct: 71 GQERFRAVTSAYYRGAFGALLVYDISRRSTFDNVGRWLQELNTHSDTTVAKMLVGNKCDL 130
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL 198
++R V E+ AE +GLFF E SAL+ NV TAF +++EIY VS+K L
Sbjct: 131 DNIREVPVEEGKALAEAEGLFFMETSALDSTNVRTAFEIVIKEIYSNVSRKIL 183
>gi|89257444|gb|ABD64936.1| Ras-related GTP-binding protein, putative [Brassica oleracea]
Length = 219
Score = 223 bits (567), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 112/211 (53%), Positives = 149/211 (70%), Gaps = 4/211 (1%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
DY+FK+V+IGDSAVGKS +L+RF ++EF+ +SKSTIGVEFQT+ + INGK IKAQIWDTA
Sbjct: 12 DYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKIDINGKEIKAQIWDTA 71
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQER+RAVTSAYYRGA+GA++VYDI+++Q+F + RW+ EL H+D ++ IL+GNKSDL
Sbjct: 72 GQERFRAVTSAYYRGAVGALLVYDISRKQTFHSIGRWLNELHTHSDMNVVTILVGNKSDL 131
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNGKV 205
D+R V + AE QGLFF E SA + NV AF +++EIY +S+K +
Sbjct: 132 KDIREVPTAEGKALAEAQGLFFMETSARDSSNVAAAFETVVKEIYNILSRKVMSSQELNK 191
Query: 206 DGPPMLA-GSKIDVISGADLEISEMKKLSTC 235
P L+ G K+ + S A E KK C
Sbjct: 192 QDPASLSNGKKVVIPSEAQ---GEAKKGGCC 219
>gi|217072250|gb|ACJ84485.1| unknown [Medicago truncatula]
gi|388507312|gb|AFK41722.1| unknown [Medicago truncatula]
Length = 220
Score = 222 bits (566), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 106/209 (50%), Positives = 153/209 (73%), Gaps = 4/209 (1%)
Query: 27 YVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTAG 86
Y+FKVV+IGDSAVGKS +LSR+ +NEF SK+TIGVEFQT+++ I+ K +KAQIWDT G
Sbjct: 14 YLFKVVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQSLEIDSKEVKAQIWDTTG 73
Query: 87 QERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDLV 146
QER+RAVTSAYYRGA+GA++VYDI++R +FD V RW++EL+ H D+++ ++L+GNK DL
Sbjct: 74 QERFRAVTSAYYRGAVGALIVYDISRRTTFDSVGRWLDELKTHCDTTVAMMLVGNKCDLD 133
Query: 147 DMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNGKVD 206
++R VS E+ AE +GLFF E SAL+ NV TAF +++EIY VS+K L K +
Sbjct: 134 NIRDVSIEEGKSLAESEGLFFMETSALDSTNVKTAFEMVIREIYNNVSRKVLNSDTYKAE 193
Query: 207 GPPMLAGSKIDVISGADLEISEMKKLSTC 235
L+ +++ +++ + + K +C
Sbjct: 194 ----LSVNRVSLVNNGNSTSKQSKGYFSC 218
>gi|15225121|ref|NP_180726.1| RAB GTPase-like protein A5D [Arabidopsis thaliana]
gi|75337278|sp|Q9SIP0.1|RAA5D_ARATH RecName: Full=Ras-related protein RABA5d; Short=AtRABA5d
gi|4582469|gb|AAD24853.1| putative RAS superfamily GTP-binding protein [Arabidopsis thaliana]
gi|32815939|gb|AAP88354.1| At2g31680 [Arabidopsis thaliana]
gi|110743709|dbj|BAE99691.1| putative RAS superfamily GTP-binding protein [Arabidopsis thaliana]
gi|330253478|gb|AEC08572.1| RAB GTPase-like protein A5D [Arabidopsis thaliana]
Length = 219
Score = 222 bits (566), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 102/173 (58%), Positives = 140/173 (80%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
+Y+FK+V+IGDSAVGKS +LSR+ +NEF SK+TIGVEFQT+ + I GK +KAQIWDTA
Sbjct: 10 EYLFKIVIIGDSAVGKSNLLSRYARNEFNAHSKATIGVEFQTQNMEIEGKEVKAQIWDTA 69
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQER+RAVTSAYYRGA+GA+VVYDI++R +F+ V RW++EL+ H+D+++ +L+GNK DL
Sbjct: 70 GQERFRAVTSAYYRGAVGALVVYDISRRSTFESVGRWLDELKTHSDTTVARMLVGNKCDL 129
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL 198
+RAVS E+ AE +GLFF E SAL+ NV TAF ++++IY +S+K+L
Sbjct: 130 ESIRAVSVEEGKALAETEGLFFMETSALDSTNVKTAFEMVIRDIYTNISRKQL 182
>gi|348527516|ref|XP_003451265.1| PREDICTED: ras-related protein Rab-25-like [Oreochromis niloticus]
Length = 207
Score = 222 bits (566), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 110/183 (60%), Positives = 138/183 (75%), Gaps = 6/183 (3%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
++VFKVV+IG+S VGKS +LSRFTKNEF DS++TIGVEF TRTV +N IKAQIWDTA
Sbjct: 8 NFVFKVVLIGESGVGKSNLLSRFTKNEFNHDSRTTIGVEFSTRTVQLNNFTIKAQIWDTA 67
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
G ERYRA+TSAYYRGA+GA++VYDITK +++ V RW++EL HAD I ++LIGNKSDL
Sbjct: 68 GLERYRAITSAYYRGAVGALLVYDITKHLTYESVERWLKELYEHADPHIVVMLIGNKSDL 127
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNGKV 205
R+V E+A +FAE +GL F E SAL+ NV+ AF +L EI+ VS KE+ V
Sbjct: 128 ESERSVPTEEAKDFAEKKGLLFLETSALDSTNVEAAFTTVLAEIHKKVSSKEV------V 181
Query: 206 DGP 208
GP
Sbjct: 182 RGP 184
>gi|449463200|ref|XP_004149322.1| PREDICTED: ras-related protein RABA5e-like [Cucumis sativus]
gi|449507589|ref|XP_004163075.1| PREDICTED: ras-related protein RABA5e-like [Cucumis sativus]
Length = 215
Score = 222 bits (566), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 113/211 (53%), Positives = 153/211 (72%), Gaps = 7/211 (3%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
+Y+FK+V+IGDSAVGKS +LSRF +NEF +SK+TIGVEFQT+ V I+GK +KAQIWDTA
Sbjct: 11 EYLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGKEVKAQIWDTA 70
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQER+RAVTSAYYRGA+GA++VYDIT+R +FD RW++EL H D++ +L+GNK DL
Sbjct: 71 GQERFRAVTSAYYRGAVGALIVYDITRRTTFDSAKRWLDELGVHCDTATVRMLVGNKCDL 130
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNGKV 205
++R VS E+ AE++GLFF E SAL+ NV TAF +++EIY VS+K L + K
Sbjct: 131 ENIRDVSVEEGKNLAEEEGLFFMETSALDSTNVRTAFELVIREIYNNVSRKVLNSDSYKA 190
Query: 206 DGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
+ L+ +++ + G S K S CS
Sbjct: 191 E----LSENRVSLADGG---ASSKKGFSCCS 214
>gi|356527445|ref|XP_003532321.1| PREDICTED: ras-related protein RABA5d-like [Glycine max]
gi|499068|emb|CAA54506.1| GTPase [Glycine max]
Length = 219
Score = 222 bits (565), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 108/212 (50%), Positives = 154/212 (72%), Gaps = 5/212 (2%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
+Y+FK+V+IGDSAVGKS +LSR+ +NEF SK+TIGVEFQT+ + I+ K +KAQIWDTA
Sbjct: 11 EYLFKIVIIGDSAVGKSNLLSRYARNEFNMHSKATIGVEFQTQCLEIDSKEVKAQIWDTA 70
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQER+RAVTSAYYRGA+GA++VYDI++R +FD V RW++EL+ H D+++ ++L+GNK DL
Sbjct: 71 GQERFRAVTSAYYRGAVGALIVYDISRRTTFDSVGRWLDELKTHCDTTVAMMLVGNKCDL 130
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNGKV 205
++RAVS ++ AE +GLFF E SAL+ NV AF +++EIY VS+K L K
Sbjct: 131 ENIRAVSIDEGKSLAEAEGLFFMETSALDSTNVKMAFEMVIREIYNNVSRKVLNSETYKA 190
Query: 206 DGPPMLAGSKIDVI-SGADLEISEMKKLSTCS 236
+ L+ +++ ++ +GA S CS
Sbjct: 191 E----LSVNRVSLVNNGAATSKQNQTYFSCCS 218
>gi|115396826|ref|XP_001214052.1| GTP-binding protein ypt3 [Aspergillus terreus NIH2624]
gi|114193621|gb|EAU35321.1| GTP-binding protein ypt3 [Aspergillus terreus NIH2624]
Length = 206
Score = 222 bits (565), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 113/204 (55%), Positives = 148/204 (72%), Gaps = 5/204 (2%)
Query: 28 VFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTAGQ 87
+ K + DS VGKS +LSRFT+NEF DSKSTIGVEF TR++ ++ K IKAQIWDTAGQ
Sbjct: 5 IRKPQLTDDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDTAGQ 64
Query: 88 ERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDLVD 147
ERYRA+TSAYYRGA+GA++VYDI+K Q++D+V RW++ELR HADS+I I+L+GNKSDL
Sbjct: 65 ERYRAITSAYYRGAVGALLVYDISKHQTYDNVNRWLKELRDHADSNIVIMLVGNKSDLRH 124
Query: 148 MRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNGKVDG 207
+RAV E+A +FA + L F E SAL+ NV+ AF +L EIY VS K L+ G+ +
Sbjct: 125 LRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALDSGDSQA-- 182
Query: 208 PPMLAGSKIDVISGADLEISEMKK 231
P+ G + VI + SE K+
Sbjct: 183 -PL--GDRRPVIDVSQTPDSESKQ 203
>gi|222640895|gb|EEE69027.1| hypothetical protein OsJ_28001 [Oryza sativa Japonica Group]
Length = 407
Score = 222 bits (565), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 104/173 (60%), Positives = 139/173 (80%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
+Y+FKVV+IGDSAVGKS +LSR+ +NEF SK+TIGVEFQT+++ INGK +KAQIWDTA
Sbjct: 11 EYLFKVVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQSMDINGKDVKAQIWDTA 70
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQER+RAVTSAYYRGA GA++VYDI++R +FD+V RW++EL H+D+++ +L+GNK DL
Sbjct: 71 GQERFRAVTSAYYRGAFGALLVYDISRRSTFDNVGRWLQELNTHSDTTVAKMLVGNKCDL 130
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL 198
++R V E+ AE +GLFF E SAL+ NV TAF +++EIY VS+K L
Sbjct: 131 DNIREVPVEEGKALAEAEGLFFMETSALDSTNVRTAFEIVIKEIYSNVSRKIL 183
>gi|346320690|gb|EGX90290.1| Ras GTPase Rab11, putative [Cordyceps militaris CM01]
Length = 204
Score = 222 bits (565), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 113/200 (56%), Positives = 148/200 (74%), Gaps = 2/200 (1%)
Query: 32 VVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTAGQERYR 91
V+IGDS VGKS +LSRFT+NEF DSKSTIGVEF TR++ ++ K IKAQIWDTAGQERYR
Sbjct: 5 VLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDTAGQERYR 64
Query: 92 AVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDLVDMRAV 151
A+TSAYYRGA+GA++VYDI+K Q++++V RW++ELR HAD++I I+L+GNKSDL +RAV
Sbjct: 65 AITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVGNKSDLRHLRAV 124
Query: 152 SAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNGKVDGPPML 211
E+A FA + L F E SAL+ NV+ AF +L EIY VS K L+ G+ +
Sbjct: 125 PTEEAKAFASENHLSFIETSALDASNVELAFQNILTEIYRIVSSKALDGGDSA--QATIG 182
Query: 212 AGSKIDVISGADLEISEMKK 231
AG+ I + AD + S+ K
Sbjct: 183 AGTNISLSKPADDDASKGGK 202
>gi|71480092|ref|NP_001025142.1| uncharacterized protein LOC574424 [Danio rerio]
gi|68533943|gb|AAH98608.1| Zgc:112037 [Danio rerio]
Length = 210
Score = 222 bits (565), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 106/177 (59%), Positives = 136/177 (76%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
++VFKVV+IG+S VGKS +LSRFTKNEF DS++TIGVEF TRTV +NG IKAQIWDTA
Sbjct: 8 NFVFKVVLIGESGVGKSNLLSRFTKNEFSHDSRTTIGVEFSTRTVQLNGLTIKAQIWDTA 67
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
G ERYRA+TSAYYRGA+GA++VYDI+K +++ RW++EL HAD I ++L+GNKSDL
Sbjct: 68 GLERYRAITSAYYRGAVGALLVYDISKHLTYESAERWLKELYDHADPHIVVMLVGNKSDL 127
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
+R+V EDA +FAE GL F E SAL NV+ AF +L EI+ V+ KE+ G+
Sbjct: 128 AAVRSVPTEDAKDFAEKNGLLFKETSALESVNVEAAFNTVLTEIHKKVNSKEVTRGS 184
>gi|357148531|ref|XP_003574801.1| PREDICTED: ras-related protein RABA5c-like [Brachypodium
distachyon]
Length = 217
Score = 221 bits (564), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 102/173 (58%), Positives = 140/173 (80%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
+Y+FKVV+IGDSAVGKS +LSR+ +NEF SK+TIGVEFQT+T+ I+ K +KAQIWDTA
Sbjct: 11 EYLFKVVIIGDSAVGKSNLLSRYARNEFNPHSKATIGVEFQTQTMEIDSKEVKAQIWDTA 70
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQER+RAVTSAYYRGA GA++VYD+++R +FD+V RW++EL H+D+++ +L+GNK DL
Sbjct: 71 GQERFRAVTSAYYRGAFGALLVYDVSRRSTFDNVGRWLQELNTHSDTTVAKMLVGNKCDL 130
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL 198
++R V E+ AE +GLFF E SAL+ NV+TAF +++EIY +VS+K L
Sbjct: 131 ENIREVPVEEGKALAESEGLFFMETSALDSTNVNTAFELVIKEIYSSVSRKIL 183
>gi|242079903|ref|XP_002444720.1| hypothetical protein SORBIDRAFT_07g026600 [Sorghum bicolor]
gi|241941070|gb|EES14215.1| hypothetical protein SORBIDRAFT_07g026600 [Sorghum bicolor]
Length = 216
Score = 221 bits (564), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 103/173 (59%), Positives = 140/173 (80%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
+Y+FKVV+IGDSAVGKS +LSR+ +NEF SK+TIGVEFQT+++ I+GK +KAQIWDTA
Sbjct: 11 EYLFKVVIIGDSAVGKSNLLSRYARNEFSLHSKATIGVEFQTQSMDIDGKEVKAQIWDTA 70
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQER+RAVTSAYYRGA GA++VYDI++R +FD+V RW++EL H+D+++ +L+GNK DL
Sbjct: 71 GQERFRAVTSAYYRGAFGALLVYDISRRSTFDNVGRWLQELNTHSDTTVAKMLVGNKCDL 130
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL 198
++R V E+ AE +GLFF E SAL+ NV TAF +++EIY +VS+K L
Sbjct: 131 DNIREVPVEEGKALAEAEGLFFMETSALDATNVRTAFEIVIREIYSSVSRKIL 183
>gi|46116970|ref|XP_384503.1| hypothetical protein FG04327.1 [Gibberella zeae PH-1]
Length = 199
Score = 221 bits (564), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 110/191 (57%), Positives = 143/191 (74%), Gaps = 2/191 (1%)
Query: 33 VIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTAGQERYRA 92
+IGDS VGKS +LSRFT+NEF DSKSTIGVEF TR++ ++ K IKAQIWDTAGQERYRA
Sbjct: 1 MIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDTAGQERYRA 60
Query: 93 VTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDLVDMRAVS 152
+TSAYYRGA+GA++VYDI+K Q++++V RW++ELR HAD++I I+L+GNKSDL +RAV
Sbjct: 61 ITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVGNKSDLRHLRAVP 120
Query: 153 AEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNGKVDGPPMLA 212
E+A FA + L F E SAL+ NV+ AF +L EIY VS K L+ G+ + A
Sbjct: 121 TEEAKSFASENHLSFIETSALDASNVELAFQNILTEIYRIVSSKALDSGDSA--QATIGA 178
Query: 213 GSKIDVISGAD 223
G+ I + AD
Sbjct: 179 GTNISLSKPAD 189
>gi|255584671|ref|XP_002533058.1| protein with unknown function [Ricinus communis]
gi|223527156|gb|EEF29328.1| protein with unknown function [Ricinus communis]
Length = 218
Score = 221 bits (563), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 106/181 (58%), Positives = 140/181 (77%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
+Y+FK+V+IGDSAVGKS +L+RF +NEF +SK+TIGVEFQT+ V I GK IKAQIWDTA
Sbjct: 12 EYLFKIVLIGDSAVGKSNLLARFARNEFDSNSKATIGVEFQTQVVDIEGKEIKAQIWDTA 71
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQER+RAVTSAYYRGA+GA++VYDIT+R SFD V RW+EEL H D++ +L+GNK DL
Sbjct: 72 GQERFRAVTSAYYRGAVGALIVYDITRRSSFDSVKRWLEELSTHCDTTAARMLVGNKCDL 131
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNGKV 205
++R VS E+ AE++ LFF E SAL+ NV+ AF +++EIY +S+K L + K
Sbjct: 132 ENIREVSREEGKTLAEEESLFFMETSALDSTNVEAAFEVVIREIYHNMSRKTLNSDSYKA 191
Query: 206 D 206
+
Sbjct: 192 E 192
>gi|225467903|ref|XP_002263362.1| PREDICTED: ras-related protein RABA5e-like [Vitis vinifera]
gi|147834571|emb|CAN69655.1| hypothetical protein VITISV_000615 [Vitis vinifera]
gi|296080913|emb|CBI18743.3| unnamed protein product [Vitis vinifera]
Length = 215
Score = 221 bits (563), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 102/173 (58%), Positives = 139/173 (80%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
+Y+FK+V+IGDSAVGKS +LSR+ +NEF SK+TIGVEFQT+ V I+GK +KAQIWDTA
Sbjct: 7 EYLFKIVIIGDSAVGKSNLLSRYARNEFDLHSKATIGVEFQTQCVDIDGKEVKAQIWDTA 66
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQER+RAVTSAYYRGA GA++VYDI++R +F+ +ARW++EL+ H D+++ +L+GNK DL
Sbjct: 67 GQERFRAVTSAYYRGAFGALLVYDISRRSTFESIARWLDELKIHCDTTVARMLVGNKCDL 126
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL 198
++R VS E+ AE +GLFF E SAL+ NV TAF +++EI+ VS+K L
Sbjct: 127 ENIRDVSTEEGKNLAEAEGLFFMETSALDATNVKTAFEMVIREIFNNVSRKVL 179
>gi|338727253|ref|XP_001917048.2| PREDICTED: ras-related protein Rab-11B-like [Equus caballus]
Length = 329
Score = 221 bits (563), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 104/164 (63%), Positives = 133/164 (81%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIW
Sbjct: 134 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIW 193
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI K ++++V RW++ELR HADS+I I+L+GNK
Sbjct: 194 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNK 253
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLL 186
SDL +RAV ++A FAE L F E SAL+ NV+ AF +L
Sbjct: 254 SDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNIL 297
>gi|355714809|gb|AES05124.1| RAB11B, member RAS oncoprotein family [Mustela putorius furo]
Length = 204
Score = 221 bits (563), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 112/194 (57%), Positives = 142/194 (73%), Gaps = 10/194 (5%)
Query: 32 VVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTAGQERYR 91
V+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIWDTAGQERYR
Sbjct: 1 VLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYR 60
Query: 92 AVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDLVDMRAV 151
A+TSAYYRGA+GA++VYDI K ++++V RW++ELR HADS+I I+L+GNKSDL +RAV
Sbjct: 61 AITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAV 120
Query: 152 SAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL--------ECGNG 203
++A FAE L F E SAL+ NV+ AF +L EIY VS+K++ GN
Sbjct: 121 PTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADRAAHDESPGNN 180
Query: 204 KVD--GPPMLAGSK 215
VD PP G K
Sbjct: 181 VVDISVPPTTDGQK 194
>gi|116667013|pdb|2D7C|A Chain A, Crystal Structure Of Human Rab11 In Complex With Fip3 Rab-
Binding Domain
gi|116667014|pdb|2D7C|B Chain B, Crystal Structure Of Human Rab11 In Complex With Fip3 Rab-
Binding Domain
Length = 167
Score = 221 bits (563), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 106/165 (64%), Positives = 133/165 (80%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIWDTA
Sbjct: 3 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 62
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
G ERYRA+TSAYYRGA+GA++VYDI K ++++V RW++ELR HADS+I I L+GNKSDL
Sbjct: 63 GLERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIXLVGNKSDL 122
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIY 190
+RAV ++A FAE GL F E SAL+ NV+ AF +L EIY
Sbjct: 123 RHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIY 167
>gi|156360721|ref|XP_001625174.1| predicted protein [Nematostella vectensis]
gi|156211993|gb|EDO33074.1| predicted protein [Nematostella vectensis]
Length = 219
Score = 221 bits (562), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 104/180 (57%), Positives = 144/180 (80%), Gaps = 3/180 (1%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D DY++K+V+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ + GKIIKAQ+W
Sbjct: 7 DHYDYLYKIVLIGDSGVGKSSLLSRFTRNEFDIESKSTIGVEFATRSIQVEGKIIKAQVW 66
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GAV+VYD+TK+++F V RW+ E+R HAD +I ++L+GNK
Sbjct: 67 DTAGQERYRAITSAYYRGAVGAVLVYDLTKQKTFQDVERWLLEVREHADPTIVVMLVGNK 126
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYG---AVSKKELE 199
DL +RAV+++DA ++ ++ GL F EASAL+ NV+ AF + + +++ A KKEL+
Sbjct: 127 CDLKHLRAVASDDAKKYGDEHGLAFIEASALDATNVEEAFQQTITKLHHVQLAKMKKELD 186
>gi|224069898|ref|XP_002303077.1| predicted protein [Populus trichocarpa]
gi|222844803|gb|EEE82350.1| predicted protein [Populus trichocarpa]
Length = 218
Score = 221 bits (562), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 109/195 (55%), Positives = 148/195 (75%), Gaps = 4/195 (2%)
Query: 27 YVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTAG 86
Y+FK+VVIGDSAVGKS +LSRF +NEF +SK+TIGVEFQT+ V I+GK IKAQIWDTAG
Sbjct: 14 YLFKIVVIGDSAVGKSNLLSRFARNEFDSNSKATIGVEFQTQVVDIDGKEIKAQIWDTAG 73
Query: 87 QERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDLV 146
QER+RAVTSAYYRGA+GA++VYDIT+R SFD V RW++EL H D++I +L+GNK DL
Sbjct: 74 QERFRAVTSAYYRGAVGALIVYDITRRTSFDSVKRWLDELGTHCDTAIARMLVGNKCDLD 133
Query: 147 DMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNGKVD 206
+R VS ++ AE++ LFF E SAL+ NV+ AF +++EIY +S+K L + K +
Sbjct: 134 SIREVSRDEGKSLAEEESLFFMETSALDSTNVEAAFEVVIREIYNNMSRKILNSDSYKAE 193
Query: 207 GPPMLAGSKIDVISG 221
L +++ +++G
Sbjct: 194 ----LTANRVSLVNG 204
>gi|330792766|ref|XP_003284458.1| rab11A, RAB family GTPase [Dictyostelium purpureum]
gi|325085601|gb|EGC39005.1| rab11A, RAB family GTPase [Dictyostelium purpureum]
Length = 217
Score = 220 bits (561), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 108/197 (54%), Positives = 145/197 (73%), Gaps = 7/197 (3%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
++ DY++K+V+IGDS VGKS +LSRFT+NEF ++KSTIGVEF TRT+ GK IKAQ+W
Sbjct: 7 EEYDYLYKIVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRTIQTEGKTIKAQVW 66
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI K+ ++ V RW+ ELR +AD +I I+L+GNK
Sbjct: 67 DTAGQERYRAITSAYYRGAVGALLVYDIAKQATYKSVERWLTELRENADRNIEIMLVGNK 126
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
SDL +R VS ++A EF+E L F E SAL+ NV+ AF +L +IY +S+ +
Sbjct: 127 SDLRHLREVSTDEAKEFSEKHKLTFIETSALDSSNVELAFQNILTQIYHLMSRP----SH 182
Query: 203 GKV--DGPPMLAGSKID 217
G + D PP G +ID
Sbjct: 183 GPIISDEPPA-PGVQID 198
>gi|332028148|gb|EGI68199.1| Ras-related protein Rab-11B [Acromyrmex echinatior]
Length = 219
Score = 220 bits (561), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 105/167 (62%), Positives = 134/167 (80%)
Query: 32 VVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTAGQERYR 91
V+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIWDTAGQERYR
Sbjct: 19 VLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYR 78
Query: 92 AVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDLVDMRAV 151
A+TSAYYRGA+GA++VYDI K ++++V RW+ ELR HAD +I I+L+GNKSDL +RAV
Sbjct: 79 AITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAV 138
Query: 152 SAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL 198
++A FAE GL F E SAL+ NV+TAF +L EIY VS+K++
Sbjct: 139 PTDEAKAFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQI 185
>gi|145504587|ref|XP_001438260.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74831454|emb|CAI39309.1| rab_C29 [Paramecium tetraurelia]
gi|124405432|emb|CAK70863.1| unnamed protein product [Paramecium tetraurelia]
Length = 216
Score = 220 bits (561), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 97/172 (56%), Positives = 141/172 (81%)
Query: 27 YVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTAG 86
++FK+V+IGDS+VGKS ILSRFTK +F FDS+ TIGVEF TR++T NGKII+AQIWDT G
Sbjct: 11 HLFKIVLIGDSSVGKSNILSRFTKRQFNFDSQPTIGVEFATRSLTENGKIIQAQIWDTCG 70
Query: 87 QERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDLV 146
QERY+++TSAYYRGA+GA+++YDITK+++F+++ +W++EL+ +A++++ +LIGNK+DL
Sbjct: 71 QERYKSITSAYYRGAVGAMLIYDITKQKTFENIEKWIQELKEYAETNVVAMLIGNKADLK 130
Query: 147 DMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL 198
R V ++ A +FAE+ + F E SA +G NVD AF RL+ EIY ++K+ L
Sbjct: 131 AQRKVPSDKAAQFAENHTMAFMEVSAFDGTNVDLAFSRLINEIYQLINKQSL 182
>gi|401625852|gb|EJS43840.1| ypt32p [Saccharomyces arboricola H-6]
Length = 222
Score = 220 bits (561), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 110/212 (51%), Positives = 145/212 (68%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
DY+FK+V+IGDS VGKS +LSRFT +EF +SKSTIGVEF TRT+ + K IKAQIWDTA
Sbjct: 11 DYLFKIVLIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEVENKKIKAQIWDTA 70
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQERYRA+TSAYYRGA+GA++VYDI+K S+++ W+ ELR +AD ++ + LIGNKSDL
Sbjct: 71 GQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLTELRENADDNVAVGLIGNKSDL 130
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNGKV 205
+RAV ++A FA + + F+E SALN DNVD AF L+ I+ VSK +++
Sbjct: 131 AHLRAVPTDEARNFAMENQMLFTETSALNSDNVDKAFRELIVAIFQMVSKHQVDLNGSGS 190
Query: 206 DGPPMLAGSKIDVISGADLEISEMKKLSTCSC 237
+ G K IS + KK S+ C
Sbjct: 191 NNVGSNGGPKGPTISLTPAPKEDKKKKSSNCC 222
>gi|405977015|gb|EKC41487.1| Ras-related protein Rab-11B [Crassostrea gigas]
Length = 172
Score = 220 bits (560), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 104/164 (63%), Positives = 134/164 (81%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIW
Sbjct: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI K ++++V RW++ELR HAD++I I+L+GNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNK 125
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLL 186
SDL +RAV ++A FAE L F E SAL+ NV+TAF +L
Sbjct: 126 SDLRHLRAVPTDEAKAFAEKNNLSFIETSALDSTNVETAFQNIL 169
>gi|225708476|gb|ACO10084.1| Ras-related protein Rab-25 [Osmerus mordax]
Length = 212
Score = 220 bits (560), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 106/185 (57%), Positives = 140/185 (75%), Gaps = 3/185 (1%)
Query: 14 HQQQENMIPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTIN 73
H+ + N + ++VFKVV+IG+S VGKS +LSRF KNEF DS++TIGVEF TRTV +N
Sbjct: 3 HRMKSN---EAYNFVFKVVLIGESGVGKSNLLSRFAKNEFNHDSRTTIGVEFSTRTVQLN 59
Query: 74 GKIIKAQIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSS 133
G IKAQIWDTAG ERYRA+TSAYYRGA+GA++VYD+TK +++ V RW++EL HAD
Sbjct: 60 GLTIKAQIWDTAGLERYRAITSAYYRGAVGALLVYDVTKHLTYESVERWLKELYDHADPH 119
Query: 134 IRIILIGNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAV 193
+ ++L+GNKSDLV R+V E+A +FAE +GL F E SAL NV+ AF +L EI+ V
Sbjct: 120 MVVMLVGNKSDLVSERSVPTEEAKDFAEKKGLLFLETSALESTNVEAAFNDVLSEIHRKV 179
Query: 194 SKKEL 198
S K++
Sbjct: 180 SSKKV 184
>gi|294895479|ref|XP_002775190.1| Rab11, putative [Perkinsus marinus ATCC 50983]
gi|239881188|gb|EER07006.1| Rab11, putative [Perkinsus marinus ATCC 50983]
Length = 178
Score = 220 bits (560), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 103/165 (62%), Positives = 132/165 (80%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
DY+FKVV+IGDS VGKS ILSRFT+ EF +S+STIGVEF T++V I K++KAQIWDTA
Sbjct: 13 DYLFKVVLIGDSGVGKSNILSRFTRGEFNLESRSTIGVEFATKSVRIGSKVVKAQIWDTA 72
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQERYRA+TSAYYRGA+GA++VYDI+KR SF++ ARW++ELR HADS I ++L+GNK DL
Sbjct: 73 GQERYRAITSAYYRGAVGALLVYDISKRSSFENAARWLKELREHADSDIVVMLVGNKCDL 132
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIY 190
+RAV ++A +F D L F E SAL NV+ AF +L++IY
Sbjct: 133 SHLRAVEEDEAKKFCTDNDLLFIETSALEATNVEEAFQEILEDIY 177
>gi|388583882|gb|EIM24183.1| ras-domain-containing protein [Wallemia sebi CBS 633.66]
Length = 222
Score = 220 bits (560), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 117/221 (52%), Positives = 152/221 (68%), Gaps = 18/221 (8%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
DY+FKVV+IGDS VGKS +LSRFT+NEF DSKSTIGVEF TR++ ++ K IKAQIWDTA
Sbjct: 9 DYLFKVVLIGDSGVGKSSVLSRFTRNEFNMDSKSTIGVEFATRSLEVDQKTIKAQIWDTA 68
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQERYRA+TSAYYRGA+GA++VYDI+K+ SF +V RW++EL+ HADS+I I+L+GNKSDL
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDISKQSSFANVERWLKELKDHADSNIVIMLVGNKSDL 128
Query: 146 VDMRAVSAEDAVEFAEDQG-----------LFFSEASALNGDNVDTAFFRLLQEIYGAVS 194
+RAV +A + E++ + F E SAL+ NV+ AF +L +IY V+
Sbjct: 129 KHLRAVPTAEAQSYTEEKSKLEDGTESSNPIRFIETSALDSTNVEAAFQNILTDIYQLVA 188
Query: 195 KKELECGNGKVDGPPMLAGSKIDVISGADLEISEMKKLSTC 235
K LE G D G I+V +D S+ KK C
Sbjct: 189 TKALEGG----DSIKPTNGETINVQPTSD---SDNKKAGCC 222
>gi|242032295|ref|XP_002463542.1| hypothetical protein SORBIDRAFT_01g001690 [Sorghum bicolor]
gi|241917396|gb|EER90540.1| hypothetical protein SORBIDRAFT_01g001690 [Sorghum bicolor]
Length = 236
Score = 220 bits (560), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 112/191 (58%), Positives = 134/191 (70%), Gaps = 9/191 (4%)
Query: 5 MSGDATDHRHQQQENMIPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVE 64
MSG R E D DY+FKVV++GDS VGKS +LSRFT+N F DSKSTIGVE
Sbjct: 1 MSG----RRPATWEQQAADDYDYLFKVVLVGDSGVGKSNLLSRFTRNTFSLDSKSTIGVE 56
Query: 65 FQTRTVTINGKIIKAQIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVE 124
F TRT+ ++GK IKAQIWDTAGQERYRAVTSAYYRGA+GA++VYD+TK +F + ARW+
Sbjct: 57 FATRTIQVDGKTIKAQIWDTAGQERYRAVTSAYYRGAVGALLVYDVTKSATFGNAARWLR 116
Query: 125 ELRAHADS-SIRIILIGNKSDLVD----MRAVSAEDAVEFAEDQGLFFSEASALNGDNVD 179
ELR HAD ++L+GNK+DL +RAV D AE +GL F E SAL+ NVD
Sbjct: 117 ELRDHADGRGTAVMLVGNKTDLAKQRGGLRAVPRGDGAALAEREGLSFVETSALDATNVD 176
Query: 180 TAFFRLLQEIY 190
AF LL EIY
Sbjct: 177 AAFVTLLTEIY 187
>gi|414873860|tpg|DAA52417.1| TPA: hypothetical protein ZEAMMB73_173009 [Zea mays]
Length = 234
Score = 219 bits (559), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 115/204 (56%), Positives = 139/204 (68%), Gaps = 15/204 (7%)
Query: 5 MSGDATDHRHQQQENMIPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVE 64
MSG R + D DY+FKVV++GDS VGKS +LSRFT+N F DSKSTIGVE
Sbjct: 1 MSG-----RRPATWDQAADDYDYLFKVVLVGDSGVGKSNLLSRFTRNAFSLDSKSTIGVE 55
Query: 65 FQTRTVTINGKIIKAQIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVE 124
F TRT+ ++GK IKAQIWDTAGQERYRA+TSAYYRGA GA++VYD+T+ +F+ ARW+
Sbjct: 56 FATRTIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAAGALLVYDVTRADTFESAARWLR 115
Query: 125 ELRAHADS-SIRIILIGNKSDLV---------DMRAVSAEDAVEFAEDQGLFFSEASALN 174
ELR HAD ++L+GNK+DL RAV DA AE +GL F E SAL+
Sbjct: 116 ELRDHADGRGAAVMLVGNKTDLARSGSRSRHHHPRAVPRGDAAALAEREGLSFVETSALD 175
Query: 175 GDNVDTAFFRLLQEIYGAVSKKEL 198
NVD AF LL EIY AVS+K L
Sbjct: 176 ATNVDAAFETLLTEIYRAVSRKAL 199
>gi|10764861|gb|AAF24551.2|AC007508_14 F1K23.21 [Arabidopsis thaliana]
Length = 212
Score = 219 bits (559), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 114/214 (53%), Positives = 150/214 (70%), Gaps = 10/214 (4%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D DY+FKVV+ GDS VGKS +LSRFT+N+F DS++TIGVEF TR++ + KI+KAQIW
Sbjct: 8 DDYDYLFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRATIGVEFATRSIQCDDKIVKAQIW 67
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQE SAYYRGA+GA++VYD+T+ +F++V RW++ELR H D++I I+L+GNK
Sbjct: 68 DTAGQE------SAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMLVGNK 121
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
+DL +RA+S E+A FAE + FF E SAL NVD AF +L +IY VSKK LE G+
Sbjct: 122 ADLRHLRAISTEEAKAFAERENTFFMETSALEAVNVDNAFTEVLTQIYRVVSKKALEAGD 181
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
P G I+V G +IS +KK CS
Sbjct: 182 DPTTALP--KGQMINV--GGRDDISAVKKPGCCS 211
>gi|66826405|ref|XP_646557.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|548673|sp|P36412.1|RB11A_DICDI RecName: Full=Ras-related protein Rab-11A
gi|414965|gb|AAA80149.1| Rab11 [Dictyostelium discoideum]
gi|60474032|gb|EAL71969.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 214
Score = 219 bits (559), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 102/179 (56%), Positives = 136/179 (75%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
++ DY++K+V+IGDS VGKS +LSRFT+NEF ++KSTIGVEF TRT+ GK IKAQ+W
Sbjct: 8 EEYDYLYKIVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRTIQTEGKTIKAQVW 67
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI K+ ++ V RW+ ELR +AD +I I+L+GNK
Sbjct: 68 DTAGQERYRAITSAYYRGAVGALLVYDIAKQATYKSVERWILELRENADRNIEIMLVGNK 127
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECG 201
SDL +R VS ++A EF+E L F E SAL+ NV+ AF +L +IY +S+ G
Sbjct: 128 SDLRHLREVSTDEAKEFSEKHKLTFIETSALDSSNVELAFQNILTQIYHIMSRPSHSTG 186
>gi|218201483|gb|EEC83910.1| hypothetical protein OsI_29960 [Oryza sativa Indica Group]
Length = 407
Score = 219 bits (558), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 103/173 (59%), Positives = 139/173 (80%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
+Y+FKVV+IGDSAVGKS +LSR+ +NEF SK+TIGVEFQT+++ I+GK +KAQIWDTA
Sbjct: 11 EYLFKVVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQSMDIDGKDVKAQIWDTA 70
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQER+RAVTSAYYRGA GA++VYDI++R +FD+V RW++EL H+D+++ +L+GNK DL
Sbjct: 71 GQERFRAVTSAYYRGAFGALLVYDISRRSTFDNVGRWLQELNTHSDTTVAKMLVGNKCDL 130
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL 198
++R V E+ AE +GLFF E SAL+ NV TAF +++EIY VS+K L
Sbjct: 131 DNIREVPVEEGKALAEAEGLFFMETSALDSTNVRTAFEIVIKEIYSNVSRKIL 183
>gi|195569261|ref|XP_002102629.1| GD19397 [Drosophila simulans]
gi|194198556|gb|EDX12132.1| GD19397 [Drosophila simulans]
Length = 198
Score = 219 bits (558), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 104/164 (63%), Positives = 133/164 (81%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIW
Sbjct: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI K ++++V RW+ ELR HAD +I I+L+GNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNK 125
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLL 186
SDL +R+V ++A FAE GL F E SAL+ NV+TAF +L
Sbjct: 126 SDLRHLRSVPTDEAKLFAERNGLSFIETSALDSTNVETAFQNIL 169
>gi|68076363|ref|XP_680101.1| small GTPase Rab11 [Plasmodium berghei strain ANKA]
gi|56500982|emb|CAH98214.1| small GTPase Rab11, putative [Plasmodium berghei]
Length = 209
Score = 219 bits (558), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 112/212 (52%), Positives = 152/212 (71%), Gaps = 6/212 (2%)
Query: 27 YVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTI-NGKIIKAQIWDTA 85
+ + VV+IGDS VGKS +LSRFT++EF +SKSTIGVEF T+++ + N KIIKAQIWDTA
Sbjct: 3 FFYLVVLIGDSGVGKSNLLSRFTRDEFNLESKSTIGVEFATKSIQLKNDKIIKAQIWDTA 62
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQERYRA+TSAYYRGA+GA++VYDITK+ +F+++ +W++ELR +ADS+I I+L+GNKSDL
Sbjct: 63 GQERYRAITSAYYRGAVGALLVYDITKKNTFENIEKWLKELRDNADSNIVILLVGNKSDL 122
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNGKV 205
+R ++ DA +FA+ + L F E SAL NV+ AF +LL EIY KK+ V
Sbjct: 123 KHLRVINDNDATQFAKKEKLAFIETSALEATNVELAFHQLLNEIYNVRQKKQATKSEDNV 182
Query: 206 DGPPMLAGSKIDVISGADLEISEMKKLSTCSC 237
+ P G KI+V + D + KK T C
Sbjct: 183 NIQPR--GKKINVDNDND---EDEKKTKTKCC 209
>gi|358055772|dbj|GAA98117.1| hypothetical protein E5Q_04800 [Mixia osmundae IAM 14324]
Length = 274
Score = 219 bits (558), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 103/165 (62%), Positives = 133/165 (80%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
D +FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR+++++ K IKAQIWDTA
Sbjct: 43 DLLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSISVDTKTIKAQIWDTA 102
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQERYRA+TSAYYRGA+GA++VYDI K ++ +V RW++EL+ HADS+I I+L+GNKSDL
Sbjct: 103 GQERYRAITSAYYRGAVGALLVYDIAKHPTYVNVQRWLKELKDHADSNIVIMLVGNKSDL 162
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIY 190
+RAV E+A +FA D+GL F E SAL+ NV+ AF +L Y
Sbjct: 163 RHLRAVPTEEAKQFATDEGLSFIETSALDASNVENAFQTILTGPY 207
>gi|6321228|ref|NP_011305.1| Ypt32p [Saccharomyces cerevisiae S288c]
gi|1730881|sp|P51996.3|YPT32_YEAST RecName: Full=GTP-binding protein YPT32/YPT11; AltName: Full=Rab
GTPase YPT32
gi|927543|emb|CAA51355.1| Ypt32p [Saccharomyces cerevisiae]
gi|1322850|emb|CAA96926.1| YPT32 [Saccharomyces cerevisiae]
gi|1655723|gb|AAC49495.1| ras-like GTPase [Saccharomyces cerevisiae]
gi|45270902|gb|AAS56832.1| YGL210W [Saccharomyces cerevisiae]
gi|151943607|gb|EDN61917.1| GTPase [Saccharomyces cerevisiae YJM789]
gi|190407147|gb|EDV10414.1| GTP-binding protein YPT32/YPT11 [Saccharomyces cerevisiae RM11-1a]
gi|256269382|gb|EEU04680.1| Ypt32p [Saccharomyces cerevisiae JAY291]
gi|285812006|tpg|DAA07906.1| TPA: Ypt32p [Saccharomyces cerevisiae S288c]
gi|323305067|gb|EGA58820.1| Ypt32p [Saccharomyces cerevisiae FostersB]
gi|323333611|gb|EGA75004.1| Ypt32p [Saccharomyces cerevisiae AWRI796]
gi|323337752|gb|EGA78996.1| Ypt32p [Saccharomyces cerevisiae Vin13]
gi|323355135|gb|EGA86964.1| Ypt32p [Saccharomyces cerevisiae VL3]
gi|349578025|dbj|GAA23191.1| K7_Ypt32p [Saccharomyces cerevisiae Kyokai no. 7]
gi|365765748|gb|EHN07254.1| Ypt32p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392299532|gb|EIW10626.1| Ypt32p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 222
Score = 219 bits (557), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 109/212 (51%), Positives = 144/212 (67%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
DY+FK+V+IGDS VGKS +LSRFT +EF +SKSTIGVEF TRT+ + K IKAQIWDTA
Sbjct: 11 DYLFKIVLIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEVENKKIKAQIWDTA 70
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQERYRA+TSAYYRGA+GA++VYDI+K S+++ W+ ELR +AD ++ + LIGNKSDL
Sbjct: 71 GQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLTELRENADDNVAVGLIGNKSDL 130
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNGKV 205
+RAV ++A FA + + F+E SALN DNVD AF L+ I+ VSK +++
Sbjct: 131 AHLRAVPTDEAKNFAMENQMLFTETSALNSDNVDKAFRELIVAIFQMVSKHQVDLSGSGT 190
Query: 206 DGPPMLAGSKIDVISGADLEISEMKKLSTCSC 237
+ K IS + KK S+ C
Sbjct: 191 NNMGSNGAPKGPTISLTPAPKEDKKKKSSNCC 222
>gi|281210631|gb|EFA84797.1| Rab GTPase [Polysphondylium pallidum PN500]
Length = 221
Score = 219 bits (557), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 111/215 (51%), Positives = 152/215 (70%), Gaps = 8/215 (3%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
DY++K+V+IGDS VGKS +LSRFT+NEF ++KSTIGVEF TRT+ GK IKAQIWDTA
Sbjct: 12 DYLYKIVLIGDSGVGKSNLLSRFTRNEFNLETKSTIGVEFATRTIVTEGKTIKAQIWDTA 71
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSS--IRIILIGNKS 143
GQERYRA+TSAYYRGA+GA++VYDI K+ ++ V RW+ ELR +AD + I I+L+GNKS
Sbjct: 72 GQERYRAITSAYYRGAVGALLVYDIAKQATYKSVERWLTELRENADRNFDIEIMLVGNKS 131
Query: 144 DLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKK-ELECGN 202
DL +R VS ++A EFAE L F E SAL+ NVD AF +L +I ++S+ + +
Sbjct: 132 DLRHLREVSTDEAKEFAEKHKLLFIETSALDSSNVDVAFQTILTQICHSMSRPTPIGAPS 191
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLSTCSC 237
G D P + G+ +D+ S + + + + C+C
Sbjct: 192 GHDDNSPSI-GTPVDISS----DTKKPNQGNNCAC 221
>gi|357504951|ref|XP_003622764.1| Ras-related protein ARA-1 [Medicago truncatula]
gi|355497779|gb|AES78982.1| Ras-related protein ARA-1 [Medicago truncatula]
Length = 215
Score = 219 bits (557), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 109/209 (52%), Positives = 155/209 (74%), Gaps = 7/209 (3%)
Query: 27 YVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTAG 86
Y+FK+V+IGDSAVGKS +LSRF +NEF +SK+TIGVEFQT+ V I+GK +KAQIWDTAG
Sbjct: 12 YLFKIVLIGDSAVGKSNLLSRFARNEFDSNSKATIGVEFQTQMVEIDGKEVKAQIWDTAG 71
Query: 87 QERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDLV 146
QER+RAVTSAYYRGA GA+VVYDI++R +F+ + RW++EL DS++ +L+GNK DL
Sbjct: 72 QERFRAVTSAYYRGAFGALVVYDISRRGTFESIKRWLDELTTQNDSTVARMLVGNKCDLE 131
Query: 147 DMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNGKVD 206
++R VS E+ AE++GLFF E SAL+ NV TAF +++EIY +S+K L + K +
Sbjct: 132 NIREVSIEEGKALAEEEGLFFMETSALDSTNVQTAFEIVIREIYNNISRKVLNSDSYKAE 191
Query: 207 GPPMLAGSKIDVISGADLEISEMKKLSTC 235
L+ +++ +++G+ S+ S+C
Sbjct: 192 ----LSVNRVTLVNGSG---SKKNMFSSC 213
>gi|452821640|gb|EME28668.1| Rab family, other [Galdieria sulphuraria]
Length = 217
Score = 218 bits (556), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 99/174 (56%), Positives = 136/174 (78%), Gaps = 1/174 (0%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTI-NGKIIKAQIWDT 84
DY+FK+V++GDS VGKS +L RFT+NEF DSKSTIGVEF T+T+ + +GK++KAQIWDT
Sbjct: 10 DYLFKIVLVGDSGVGKSNLLWRFTRNEFHLDSKSTIGVEFATKTIHLEDGKVVKAQIWDT 69
Query: 85 AGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSD 144
AGQERY+A+T+AYYRGA GA++VYDIT+R S +++ RW+ ELR H D+ + ++L+GNK D
Sbjct: 70 AGQERYKAITAAYYRGAFGALLVYDITQRASLENIPRWLRELREHVDNQMVVMLVGNKCD 129
Query: 145 LVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL 198
L +R V E + AE++GL F E SAL+ NV+ AF +L++EIY + KK L
Sbjct: 130 LRHLRQVEIEQGKKLAEEEGLLFLETSALDSTNVEEAFTQLIREIYRLMKKKAL 183
>gi|78714212|gb|ABB51088.1| Small GTPase Rab11 [Gracilaria lemaneiformis]
Length = 221
Score = 218 bits (556), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 107/177 (60%), Positives = 135/177 (76%)
Query: 32 VVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTAGQERYR 91
V+ S + KS +LSRFT+NEF +SKSTIGVEF TR++ GKIIKAQIWDTAGQERYR
Sbjct: 22 VLTVPSFLSKSNLLSRFTRNEFSLESKSTIGVEFATRSIQCEGKIIKAQIWDTAGQERYR 81
Query: 92 AVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDLVDMRAV 151
A+TSAYYRGA+GA++VYDITK+ SFD+V RW++EL+ HAD++I I+L+GNKSDL ++AV
Sbjct: 82 AITSAYYRGAVGALLVYDITKKDSFDNVQRWLKELKDHADANIVIMLVGNKSDLQHLKAV 141
Query: 152 SAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNGKVDGP 208
+ +DA FAE GL F E SAL+ NV+ AF +L EIY SKK LE G+ P
Sbjct: 142 TTDDASAFAESNGLSFIETSALDNSNVEEAFRSILSEIYRLGSKKALEKGSTSNFAP 198
>gi|195498398|ref|XP_002096506.1| GE25707 [Drosophila yakuba]
gi|194182607|gb|EDW96218.1| GE25707 [Drosophila yakuba]
Length = 288
Score = 218 bits (556), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 112/204 (54%), Positives = 148/204 (72%), Gaps = 12/204 (5%)
Query: 32 VVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTAGQERYR 91
V+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIWDTAGQERYR
Sbjct: 89 VLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYR 148
Query: 92 AVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDLVDMRAV 151
A+TSAYYRGA+GA++VYDI K ++++V RW+ ELR HAD +I I+L+GNKSDL +R+V
Sbjct: 149 AITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRSV 208
Query: 152 SAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNGKVDGPPML 211
++A FAE GL F E SAL+ NV+TAF +L EIY VS+K++ PP
Sbjct: 209 PTDEAKLFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQIR-------DPP-- 259
Query: 212 AGSKIDVISGADLEISEMKKLSTC 235
+ DVI +++E ++K T
Sbjct: 260 ---EGDVIRPSNVEPIDVKPTVTA 280
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 44/51 (86%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTIN 73
D+ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++
Sbjct: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVS 56
>gi|194387092|dbj|BAG59912.1| unnamed protein product [Homo sapiens]
Length = 179
Score = 218 bits (555), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 104/164 (63%), Positives = 133/164 (81%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIW
Sbjct: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI K ++++V RW++ELR HADS+I I+L+GNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNK 125
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLL 186
SDL +RAV ++A FAE L F E SAL+ NV+ AF +L
Sbjct: 126 SDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNIL 169
>gi|147902449|ref|NP_001086223.1| RAB25, member RAS oncogene family [Xenopus laevis]
gi|49258038|gb|AAH74344.1| MGC84182 protein [Xenopus laevis]
Length = 216
Score = 218 bits (554), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 111/211 (52%), Positives = 155/211 (73%), Gaps = 7/211 (3%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
++VFKVV+IG+S VGK+ +LSRFT+NEF DS++TIGVEF TRT+TI+G ++K+QIWDTA
Sbjct: 9 NFVFKVVLIGESGVGKTNLLSRFTRNEFNHDSRTTIGVEFSTRTLTIDGHLVKSQIWDTA 68
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
G ERYRA+TSAYYRGA+GA++VYDITK QS++ V RW++EL HAD+SI ++L+GNKSDL
Sbjct: 69 GLERYRAITSAYYRGAVGALLVYDITKHQSYESVDRWLKELYDHADASIVVMLVGNKSDL 128
Query: 146 VD-MRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNGK 204
D + V +E+A +AE GL F E SAL+ NV+ AF +L++IY V K + G
Sbjct: 129 KDEAQEVPSEEAKAYAERNGLLFIETSALDATNVELAFETILRDIYTRVLKSK-----GG 183
Query: 205 VDGPPMLAGSKIDVISGADLEISEMKKLSTC 235
+ P + SK + + +++E K+ S C
Sbjct: 184 IQQPSTINLSKEASPTQSITQVTEQKR-SCC 213
>gi|327357374|gb|EGE86231.1| Rab1a [Ajellomyces dermatitidis ATCC 18188]
Length = 209
Score = 218 bits (554), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 108/180 (60%), Positives = 134/180 (74%), Gaps = 2/180 (1%)
Query: 31 VVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTAGQERY 90
VV+IGDS VGKS +LSRFT+NEF DSKSTIGVEF TR++ ++GK IKAQIWDTAGQERY
Sbjct: 11 VVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERY 70
Query: 91 RAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDLVDMRA 150
RA+TSAYYRGA+GA++VYD TK Q+F + RW++ELR HAD +I I+L+GNK D +RA
Sbjct: 71 RAITSAYYRGAVGALLVYDTTKEQTFANCERWLKELREHADKNIVIMLVGNKIDQKHVRA 130
Query: 151 VSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNGKVDGPPM 210
+ + EFAE + L F E SAL+ NV+ AF +L EIY VS K LE NG P+
Sbjct: 131 IKTDQGAEFAETRKLSFIETSALDATNVELAFQNILTEIYRIVSSKALE--NGTSGQNPL 188
>gi|21217443|gb|AAM33785.1| Rab11 [Periplaneta americana]
Length = 204
Score = 218 bits (554), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 104/166 (62%), Positives = 133/166 (80%)
Query: 33 VIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTAGQERYRA 92
+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIWDTAGQERYRA
Sbjct: 4 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRA 63
Query: 93 VTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDLVDMRAVS 152
+TSAYYRGA+GA++VYDI K ++++V RW+ ELR HAD +I I+L+GNKSDL +RAV
Sbjct: 64 ITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVP 123
Query: 153 AEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL 198
++A FAE GL F E SAL+ NV+TAF +L EIY VS+K++
Sbjct: 124 TDEAKAFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQI 169
>gi|147899039|ref|NP_001089868.1| uncharacterized protein LOC734934 [Xenopus laevis]
gi|80476446|gb|AAI08571.1| MGC131054 protein [Xenopus laevis]
Length = 216
Score = 218 bits (554), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 109/214 (50%), Positives = 157/214 (73%), Gaps = 7/214 (3%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
++ ++VFKVV+IG+S VGK+ +LSRFT+NEF DS++TIGVEF TRT+T++G ++K+QIW
Sbjct: 6 EEFNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTLTVDGHLVKSQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAG ERYRA+TSAYYRGA+GA++VYDITK QS+++V RW++EL HAD+SI ++L+GNK
Sbjct: 66 DTAGLERYRAITSAYYRGAVGALLVYDITKHQSYENVDRWLKELYDHADASIVVMLVGNK 125
Query: 143 SDLVD-MRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECG 201
DL D + V +E+A +AE GL F E SAL+ NV+ AF +L++IY V K +
Sbjct: 126 CDLKDEAQEVPSEEAKAYAEQNGLLFIETSALDATNVEVAFETILRDIYTRVLKLK---- 181
Query: 202 NGKVDGPPMLAGSKIDVISGADLEISEMKKLSTC 235
G + P + SK + + +++E K+ S C
Sbjct: 182 -GGIQQPSTINLSKEASPTQSITQVTEQKR-SCC 213
>gi|449489778|ref|XP_002187627.2| PREDICTED: ras-related protein Rab-11A-like [Taeniopygia guttata]
Length = 232
Score = 217 bits (553), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 101/168 (60%), Positives = 135/168 (80%)
Query: 31 VVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTAGQERY 90
VV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++ K +KAQIWDTAGQERY
Sbjct: 30 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDNKTVKAQIWDTAGQERY 89
Query: 91 RAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDLVDMRA 150
RA+TSAYYRGA+GA++VYDI K ++++ RW++EL+ HAD++I I+L+GNKSDL +RA
Sbjct: 90 RAITSAYYRGAVGALLVYDIAKYLTYENAERWLKELQDHADANIVIMLVGNKSDLRHLRA 149
Query: 151 VSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL 198
V ++A FAE GL F E SAL+ NV+TAF +L EIY VS++++
Sbjct: 150 VPTDEARSFAEKNGLSFLETSALDSTNVETAFHNILSEIYRIVSQRQI 197
>gi|259146304|emb|CAY79561.1| Ypt32p [Saccharomyces cerevisiae EC1118]
Length = 222
Score = 217 bits (553), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 108/212 (50%), Positives = 144/212 (67%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
DY+FK+V+IGDS VGKS +LSRFT +EF +SKSTIGVEF TRT+ + K IKAQIWDTA
Sbjct: 11 DYLFKIVLIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEVENKKIKAQIWDTA 70
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQERYRA+TSAYYRGA+GA++VYDI+K S+++ W+ ELR +AD ++ + LIGNKSDL
Sbjct: 71 GQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLTELRENADDNVAVGLIGNKSDL 130
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNGKV 205
+RAV ++A FA + + F++ SALN DNVD AF L+ I+ VSK +++
Sbjct: 131 AHLRAVPTDEAKNFAMENQMLFTDTSALNSDNVDKAFRELIVAIFQMVSKHQVDLSGSGT 190
Query: 206 DGPPMLAGSKIDVISGADLEISEMKKLSTCSC 237
+ K IS + KK S+ C
Sbjct: 191 NNMGSNGAPKGPTISLTPAPKEDKKKKSSNCC 222
>gi|256071416|ref|XP_002572036.1| rab11 [Schistosoma mansoni]
gi|350645030|emb|CCD60260.1| rab11, putative [Schistosoma mansoni]
Length = 218
Score = 216 bits (551), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 101/171 (59%), Positives = 135/171 (78%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF T++V I+G+ IKAQIW
Sbjct: 11 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSVEIDGRTIKAQIW 70
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+T+AYYRGA+GA++VYDITKR++F+++ W+ ELR + + + ++L+GNK
Sbjct: 71 DTAGQERYRAITAAYYRGAVGALLVYDITKRETFNNLEHWLLELRNNVELDMVVMLVGNK 130
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAV 193
DL +R V EDA +AE GLFF E SAL V+ AF+ +L+ I+ AV
Sbjct: 131 CDLRHLRTVQTEDAKLWAERHGLFFMETSALESTGVENAFYYILKTIFEAV 181
>gi|365760833|gb|EHN02521.1| Ypt32p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 222
Score = 216 bits (551), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 102/174 (58%), Positives = 134/174 (77%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
DY+FK+V+IGDS VGKS +LSRFT +EF +SKSTIGVEF TRT+ + K IKAQIWDTA
Sbjct: 11 DYLFKIVLIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEVENKKIKAQIWDTA 70
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQERYRA+TSAYYRGA+GA++VYDI+K S+++ W+ ELR +AD ++ + LIGNKSDL
Sbjct: 71 GQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLTELRENADDNVAVGLIGNKSDL 130
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELE 199
+RAV ++A FA + + F+E SALN DNVD AF L+ I+ VSK +++
Sbjct: 131 AHLRAVPTDEAKNFAMENQMLFTETSALNSDNVDRAFRELIVAIFQMVSKHQVD 184
>gi|56758196|gb|AAW27238.1| SJCHGC02859 protein [Schistosoma japonicum]
Length = 218
Score = 216 bits (551), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 103/172 (59%), Positives = 135/172 (78%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
++ DY+FK+V+IGDS VGKS +LSRFT++ F +SKSTIGVEF TR V I+GK+IKAQIW
Sbjct: 11 EEYDYLFKIVLIGDSGVGKSNLLSRFTRDTFNLESKSTIGVEFATRNVNIDGKVIKAQIW 70
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYD+ QSF ++ W++EL HA+ +I ++L+GNK
Sbjct: 71 DTAGQERYRAITSAYYRGAVGALLVYDVCVLQSFRNLEIWLKELNDHAEKNIVVMLVGNK 130
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVS 194
DL +R+V EDA FA+ QGL F E SAL+ NV+ AF ++LQ IY VS
Sbjct: 131 CDLRHLRSVGTEDARFFAQQQGLSFIETSALDSTNVEEAFCQILQNIYSIVS 182
>gi|323348755|gb|EGA82996.1| Ypt32p [Saccharomyces cerevisiae Lalvin QA23]
Length = 222
Score = 216 bits (551), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 108/212 (50%), Positives = 143/212 (67%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
DY+FK+V+IGDS VGKS +LSRFT +EF +SKSTIGVEF TRT+ + K IKAQIWDTA
Sbjct: 11 DYLFKIVLIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEVENKKIKAQIWDTA 70
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQERYRA+TSAYYRGA+GA++VYDI+K S+++ W+ ELR +AD ++ + LIGNKSDL
Sbjct: 71 GQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLTELRENADDNVAVGLIGNKSDL 130
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNGKV 205
+RAV ++A FA + + F+ SALN DNVD AF L+ I+ VSK +++
Sbjct: 131 AHLRAVPTDEAKNFAMENQMLFTXTSALNSDNVDKAFRELIVAIFQMVSKHQVDLSGSGT 190
Query: 206 DGPPMLAGSKIDVISGADLEISEMKKLSTCSC 237
+ K IS + KK S+ C
Sbjct: 191 NNMGSNGAPKGPTISLTPAPKEDKKKKSSNCC 222
>gi|307107707|gb|EFN55949.1| hypothetical protein CHLNCDRAFT_48772 [Chlorella variabilis]
Length = 222
Score = 216 bits (550), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 101/177 (57%), Positives = 131/177 (74%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D D + KVV+IGDS VGK+ LSRF + EF SK TIGVEF T+ +TI G +IK QIW
Sbjct: 9 DDYDMLLKVVLIGDSGVGKTNCLSRFCRGEFQASSKPTIGVEFATKALTIEGDLIKCQIW 68
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+T+AYYRGA+GA++VYD+T+ SF+ + RW+ ELR HA S + ++L+GNK
Sbjct: 69 DTAGQERYRAITNAYYRGAVGALLVYDVTRASSFESIPRWLNELREHASSDMVVMLVGNK 128
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELE 199
+DLVD R VS + E A+ +GL F E SAL+G NV+ AF R+ EI+G V K+ LE
Sbjct: 129 TDLVDQRDVSMQQGQELAQREGLLFIETSALDGSNVEQAFSRVAAEIHGIVRKRRLE 185
>gi|21553627|gb|AAM62720.1| putative RAS superfamily GTP-binding protein [Arabidopsis thaliana]
Length = 219
Score = 216 bits (550), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 99/173 (57%), Positives = 138/173 (79%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
+Y+FK+V+IGDSAVGKS +LSR+ +NEF SK+TIGVE +T+ + I GK +KAQIWDTA
Sbjct: 10 EYLFKIVIIGDSAVGKSNLLSRYARNEFNAHSKATIGVELETQNMEIEGKEVKAQIWDTA 69
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
QER+RAVTSAYYRGA+GA+VVYDI++R +F+ V RW++EL+ H+D+++ +L+GNK DL
Sbjct: 70 CQERFRAVTSAYYRGAVGALVVYDISRRSTFESVGRWLDELKTHSDTTVARMLVGNKCDL 129
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL 198
+RAVS E+ AE +GLFF E SAL+ NV TAF ++++IY +S+K+L
Sbjct: 130 ESIRAVSVEEGKALAETEGLFFMETSALDSTNVKTAFEMVIRDIYTNISRKQL 182
>gi|226443180|ref|NP_001140072.1| ras-related protein Rab-25 [Salmo salar]
gi|221221692|gb|ACM09507.1| Ras-related protein Rab-25 [Salmo salar]
Length = 211
Score = 216 bits (549), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 105/177 (59%), Positives = 136/177 (76%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
++VFKVV+IG+S VGKS +LSRFTKNEF DS++TIGVEF TRT+ + IIKAQIWDTA
Sbjct: 8 NFVFKVVLIGESGVGKSNLLSRFTKNEFNHDSRTTIGVEFSTRTIQLKSLIIKAQIWDTA 67
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
G ERYRA+TSAYYRGA+GA++VYDITK +++ V RW++EL HAD I ++L+GNK+DL
Sbjct: 68 GLERYRAITSAYYRGAVGALLVYDITKHLTYESVERWLKELYDHADPHIVVMLVGNKTDL 127
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
R+V E+A +FAE GL F E SAL NV+TAF +L EI+ VS K++ G+
Sbjct: 128 GSERSVPNEEAKDFAEKNGLLFLETSALESTNVETAFQNVLGEIHRKVSSKKVLRGS 184
>gi|308476613|ref|XP_003100522.1| CRE-RAB-11.2 protein [Caenorhabditis remanei]
gi|308264778|gb|EFP08731.1| CRE-RAB-11.2 protein [Caenorhabditis remanei]
Length = 345
Score = 216 bits (549), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 105/175 (60%), Positives = 134/175 (76%), Gaps = 1/175 (0%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
++ DY+FKVV+IGDS VGKS +LSRFT+N+F ++KSTIGVEF TR++ I GK IKA IW
Sbjct: 7 EEYDYLFKVVLIGDSGVGKSNLLSRFTRNQFDLETKSTIGVEFATRSMMIEGKKIKATIW 66
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSS-IRIILIGN 141
DTAGQERYRA+TSAYYRG LGA+VVYDI K Q+F+++ RW++ELR HAD I I+L+GN
Sbjct: 67 DTAGQERYRAITSAYYRGTLGALVVYDIAKHQTFENIERWLKELRNHADQQDISIMLVGN 126
Query: 142 KSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKK 196
K+DL +RAV ++A FAE + F E SAL+ NV+ A LL IY +VS K
Sbjct: 127 KTDLRHLRAVPTDEAAVFAERNQMSFIETSALDSTNVEEALRNLLTAIYKSVSTK 181
>gi|225456136|ref|XP_002281955.1| PREDICTED: ras-related protein RABA6b [Vitis vinifera]
gi|297734313|emb|CBI15560.3| unnamed protein product [Vitis vinifera]
Length = 218
Score = 215 bits (548), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 109/216 (50%), Positives = 150/216 (69%), Gaps = 8/216 (3%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FK V+IGDSAVGKS +LSRF+++EF DSK TIGVEF R + + K+IKAQIW
Sbjct: 8 DECDYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTIGVEFAYRNIKVGDKLIKAQIW 67
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQER+RA+TS+YYRGALGA++VYDIT+R +F+++ +W+ ELR + I+L+GNK
Sbjct: 68 DTAGQERFRAITSSYYRGALGALLVYDITRRATFENLKKWLRELRDFGKPDMVIVLVGNK 127
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
SDL R V E+ AE +GL F E SAL NV+ AF ++ +I+ S+K LE
Sbjct: 128 SDLGHSREVDEEEGKTLAETEGLCFMETSALENLNVEEAFLHMITKIHEVTSQKNLE--- 184
Query: 203 GKVDGP--PMLAGSKIDVISGADLEISEMKKLSTCS 236
K++ P P++ G +I + D E+S K+ S CS
Sbjct: 185 AKLNEPVKPLIIGKEIIHV---DHEVSATKQSSCCS 217
>gi|94733749|emb|CAK11462.1| novel protein similar to vertebrate RAB25, member RAS oncogene
family (RAB25) [Danio rerio]
Length = 210
Score = 215 bits (548), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 104/189 (55%), Positives = 139/189 (73%), Gaps = 6/189 (3%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
++VFKVV+IG+S VGKS +LSRFTKNEF DS++TIGVEF TR+V ++ IKAQIWDTA
Sbjct: 8 NFVFKVVLIGESGVGKSNLLSRFTKNEFNHDSRTTIGVEFSTRSVQVDSITIKAQIWDTA 67
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
G ERYRA+TSAYYRGA+GA++VYDITK +++ V RW++EL HAD I ++L+GNK+DL
Sbjct: 68 GLERYRAITSAYYRGAVGALLVYDITKHLTYESVERWLKELYDHADPHIVVMLVGNKNDL 127
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN--- 202
+R V E+A +FA+ GL F E SAL NV++AF +L I+ V+ KE+ G+
Sbjct: 128 ATVRTVPTEEAKDFADANGLLFMETSALESTNVESAFLEVLTAIHQKVASKEVTRGSISA 187
Query: 203 ---GKVDGP 208
G+ GP
Sbjct: 188 VTLGQTHGP 196
>gi|47203604|emb|CAF87898.1| unnamed protein product [Tetraodon nigroviridis]
Length = 203
Score = 215 bits (548), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 109/189 (57%), Positives = 140/189 (74%), Gaps = 10/189 (5%)
Query: 31 VVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTAGQERY 90
VV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIWDTAGQERY
Sbjct: 1 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERY 60
Query: 91 RAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDLVDMRA 150
RA+TSAYYRGA+GA++VYDI K ++++V RW++ELR HAD++I I+L+GNKSDL +RA
Sbjct: 61 RAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDLRHLRA 120
Query: 151 VSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL--------ECGN 202
V ++A FAE L F E SAL+ V+ AF +L EIY VS+K++ GN
Sbjct: 121 VPTDEARAFAEKNTLSFIETSALDSTKVEEAFKNILTEIYRIVSQKQIADRSAHDESPGN 180
Query: 203 GKVD--GPP 209
VD PP
Sbjct: 181 NVVDISLPP 189
>gi|403419077|emb|CCM05777.1| predicted protein [Fibroporia radiculosa]
Length = 237
Score = 215 bits (548), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 108/199 (54%), Positives = 140/199 (70%), Gaps = 25/199 (12%)
Query: 26 DYVFKVVVIGDSAVGKS-------------------------QILSRFTKNEFFFDSKST 60
DY+FKVV+IGDS VGKS +LSRFT+NEF ++KST
Sbjct: 8 DYLFKVVLIGDSGVGKSCVPLRACLATSRLIKFILSFVSQHSNLLSRFTRNEFNLETKST 67
Query: 61 IGVEFQTRTVTINGKIIKAQIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVA 120
IGVEF TR++T++GK +KAQIWDTAGQERYRA+T+AYYRGA+GA++VYDI K ++ V
Sbjct: 68 IGVEFATRSITVDGKTLKAQIWDTAGQERYRAITAAYYRGAVGALLVYDIAKHGTYVDVT 127
Query: 121 RWVEELRAHADSSIRIILIGNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDT 180
RW++ELR HADS+I I+L+GNKSDL +RAV ++A FA + GL F E SAL+ NV++
Sbjct: 128 RWLKELRDHADSNIVIMLVGNKSDLKHLRAVPTDEAKTFATENGLSFIETSALDASNVES 187
Query: 181 AFFRLLQEIYGAVSKKELE 199
AF +L +IY VS K LE
Sbjct: 188 AFQTILTDIYRIVSSKSLE 206
>gi|56118662|ref|NP_001007903.1| RAB25, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|51513190|gb|AAH80339.1| RAB25, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|89271301|emb|CAJ82444.1| RAB25, member RAS oncogene family [Xenopus (Silurana) tropicalis]
Length = 216
Score = 215 bits (547), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 106/194 (54%), Positives = 146/194 (75%), Gaps = 6/194 (3%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
++ ++VFKVV+IG+S VGK+ +LSRFT+NEF DS++TIGVEF TRT+TI+G ++K+QIW
Sbjct: 6 EEFNFVFKVVLIGESGVGKTNLLSRFTRNEFNHDSRTTIGVEFSTRTLTIDGHLVKSQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAG ERYRA+TSAYYRGA+GA++VYDITK QS++ V RW++EL HAD+SI ++L+GNK
Sbjct: 66 DTAGLERYRAITSAYYRGAVGALLVYDITKHQSYESVDRWLKELYDHADASIVVMLVGNK 125
Query: 143 SDLVD-MRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECG 201
DL D + V +E+A +AE GL F E SAL+ NV+ AF +L++IY V K +
Sbjct: 126 CDLKDEAQEVPSEEAKAYAERNGLLFIETSALDATNVELAFESILRDIYMRVLKSK---- 181
Query: 202 NGKVDGPPMLAGSK 215
G+ P + SK
Sbjct: 182 -GETQQPSTINLSK 194
>gi|118376340|ref|XP_001021352.1| Ras family protein [Tetrahymena thermophila]
gi|89303119|gb|EAS01107.1| Ras family protein [Tetrahymena thermophila SB210]
gi|307777772|dbj|BAJ21282.1| Rab-family small GTPase Rab11A [Tetrahymena thermophila]
Length = 230
Score = 215 bits (547), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 98/173 (56%), Positives = 133/173 (76%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
DY+FK+V+IGDS VGKS +LSRFTK+EF D K+TIGVEF TR++ + K+IKAQIWDTA
Sbjct: 9 DYIFKIVLIGDSGVGKSNLLSRFTKDEFNQDQKTTIGVEFATRSIMADNKLIKAQIWDTA 68
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQERY A+TSAYYRGA+GA+++YDITK SF ++ +W++E+R HA+ I ++L+GNKSDL
Sbjct: 69 GQERYVAITSAYYRGAVGALLIYDITKHSSFINIQKWLDEIRDHAEPHIVVMLVGNKSDL 128
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL 198
+R V EDA FAE + F E SAL+ NV+ F R++ EIY ++K+ +
Sbjct: 129 KHLRQVRQEDATAFAEKNNIAFIETSALDASNVELTFQRIITEIYQLLNKRSM 181
>gi|56693355|ref|NP_001008641.1| ras-related protein Rab-25 [Danio rerio]
gi|56270511|gb|AAH86715.1| RAB25, member RAS oncogene family [Danio rerio]
Length = 210
Score = 215 bits (547), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 104/189 (55%), Positives = 139/189 (73%), Gaps = 6/189 (3%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
++VFKVV+IG+S VGKS +LSRFTKNEF DS++TIGVEF TR+V ++ IKAQIWDTA
Sbjct: 8 NFVFKVVLIGESGVGKSNLLSRFTKNEFNHDSRTTIGVEFSTRSVQVDSITIKAQIWDTA 67
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
G ERYRA+TSAYYRGA+GA++VYDITK +++ V RW++EL HAD I ++L+GNK+DL
Sbjct: 68 GLERYRAITSAYYRGAVGALLVYDITKHLTYESVERWLKELYDHADPHIVVMLVGNKNDL 127
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN--- 202
+R V E+A +FA+ GL F E SAL NV++AF +L I+ V+ KE+ G+
Sbjct: 128 ATVRTVPTEEAKDFADANGLLFMETSALESTNVESAFLEVLTAIHQKVASKEVTRGSISA 187
Query: 203 ---GKVDGP 208
G+ GP
Sbjct: 188 VTLGQTHGP 196
>gi|346465357|gb|AEO32523.1| hypothetical protein [Amblyomma maculatum]
Length = 168
Score = 215 bits (547), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 98/160 (61%), Positives = 128/160 (80%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D DY+FK+V+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++ K++KAQIW
Sbjct: 9 DDYDYLFKLVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDAKVLKAQIW 68
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYD+T+R +F++ RW+ ELR H D +I ++LIGNK
Sbjct: 69 DTAGQERYRAITSAYYRGAVGALLVYDVTRRSTFENAERWLRELRDHTDPNIVVMLIGNK 128
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAF 182
SDL + AVS +D FAE + L+F E SAL NV+ AF
Sbjct: 129 SDLRHLVAVSTDDGKAFAERESLYFMETSALEATNVENAF 168
>gi|432883282|ref|XP_004074246.1| PREDICTED: ras-related protein Rab-25-like [Oryzias latipes]
Length = 211
Score = 215 bits (547), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 102/180 (56%), Positives = 136/180 (75%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D ++VFKVV+IG+S VGKS +LSRFTKNEF DS++TIGVEF TRTV + IIKAQIW
Sbjct: 5 DSYNFVFKVVLIGESGVGKSNLLSRFTKNEFRHDSRTTIGVEFSTRTVQLENFIIKAQIW 64
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAG ERYRA+TSAYYRGA+GA++VYDI+K +++ RW++EL HAD I ++L+GNK
Sbjct: 65 DTAGLERYRAITSAYYRGAVGALLVYDISKHLTYESAERWLKELYDHADPHIVVMLVGNK 124
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
SDL R V E+A FA+++GL F E SAL+ NV++AF +L I+ V+ +E+ G+
Sbjct: 125 SDLQSQRTVPTEEAQHFADEKGLMFMETSALDSTNVESAFHEVLTAIHKKVASREVTRGS 184
>gi|123392476|ref|XP_001300248.1| Ras-related protein Rab11C [Trichomonas vaginalis G3]
gi|62736254|gb|AAX97456.1| small Rab GTPase Rab11a [Trichomonas vaginalis]
gi|121881256|gb|EAX87318.1| Ras-related protein Rab11C, putative [Trichomonas vaginalis G3]
Length = 211
Score = 214 bits (546), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 106/210 (50%), Positives = 149/210 (70%), Gaps = 6/210 (2%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
D++ K+V+IGDS VGK+ +LSRF +++F DSKSTIGVEF T+T+ I GK +KAQIWDTA
Sbjct: 7 DFLLKIVLIGDSGVGKTNLLSRFARDQFNPDSKSTIGVEFATKTLEIEGKTVKAQIWDTA 66
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQERYRA+TSAYYRGA+GA+++YDIT +F+ ++RW++ELR +ADS+I ++L+GNKSDL
Sbjct: 67 GQERYRAITSAYYRGAIGALLLYDITASLTFNSLSRWLQELRENADSNIVVMLVGNKSDL 126
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNGKV 205
++RAVS ED F++ + L F E SA N NV AF L+ EI +SK+ +
Sbjct: 127 QELRAVSTEDGTGFSQQENLLFIETSARNATNVQEAFTTLITEIVHRLSKQNIVSP---- 182
Query: 206 DGPPMLAGSKIDVISGADLEISEMKKLSTC 235
D P + +K I+ + + KK +TC
Sbjct: 183 DSPAKVGPNKGVTITSTTAD--DKKKKNTC 210
>gi|348513149|ref|XP_003444105.1| PREDICTED: ras-related protein Rab-25-like [Oreochromis niloticus]
Length = 210
Score = 214 bits (546), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 102/180 (56%), Positives = 137/180 (76%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D ++VFKVV+IG+S VGKS +LSRFTKNEF DS++TIGVEF TRTV I+ IKAQIW
Sbjct: 5 DSYNFVFKVVLIGESGVGKSNLLSRFTKNEFAHDSRTTIGVEFSTRTVRIDNLTIKAQIW 64
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAG ERYRA+TSAYYRGA+GA++VYDI+K +++ RW++EL HAD I ++L+GNK
Sbjct: 65 DTAGLERYRAITSAYYRGAVGALLVYDISKHLTYESAERWLKELYDHADPHIVVMLVGNK 124
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
SDL ++R V ++A +FAE +GL F E SAL+ NV+ AF +L I+ V+ +E+ G+
Sbjct: 125 SDLENLRTVPTDEARDFAEKKGLMFMETSALDSTNVEAAFSEVLTAIHTKVASREVTRGS 184
>gi|428673459|gb|EKX74372.1| Ras-related protein rab11 small GTP-binding protein, putative
[Babesia equi]
Length = 221
Score = 214 bits (546), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 106/165 (64%), Positives = 125/165 (75%), Gaps = 1/165 (0%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTI-NGKIIKAQIWDT 84
DY+FK+V+IGDS VGKS +L RF K F DSKSTIGVEF T+ V + NGKI KAQIWDT
Sbjct: 8 DYLFKIVLIGDSNVGKSNLLDRFVKGTFKLDSKSTIGVEFATKNVQLRNGKIAKAQIWDT 67
Query: 85 AGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSD 144
AGQERYRA+TSAYYRGA GA+VVYDI RQSF V+RW+ EL + D+++ I+L GNKSD
Sbjct: 68 AGQERYRAITSAYYRGARGAIVVYDIASRQSFQSVSRWLTELNEYGDANMVIVLAGNKSD 127
Query: 145 LVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEI 189
LV++R VS EDA FA+ L F E S LN DNV+TAF LL I
Sbjct: 128 LVNLREVSTEDAERFAKANNLLFFETSCLNSDNVETAFTELLSAI 172
>gi|339521883|gb|AEJ84106.1| Ras-like protein Rab-11B [Capra hircus]
Length = 218
Score = 214 bits (545), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 111/201 (55%), Positives = 143/201 (71%), Gaps = 10/201 (4%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IG S VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIW
Sbjct: 6 DEYDYLFKVVLIGGSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI K ++++ RW++ELR HADS+I I L+G K
Sbjct: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKPLTYENGERWLKELRDHADSNIVIRLVGTK 125
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL---- 198
S L +RAV ++A F+E L F SAL+ NV+ AF +L EIY VS+K++
Sbjct: 126 SALRHLRAVPTDEARAFSEKNNLSFIATSALDSTNVEEAFKNILTEIYRIVSQKQIADRA 185
Query: 199 ----ECGNGKVD--GPPMLAG 213
GN VD PP G
Sbjct: 186 AHDESPGNNFVDISVPPTTDG 206
>gi|5106984|gb|AAD39911.1|AF119675_1 small GTP-binding protein RAB25 [Mus musculus]
gi|5106986|gb|AAD39912.1|AF119676_1 small GTP-binding protein RAB25 [Mus musculus]
Length = 213
Score = 214 bits (545), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 106/210 (50%), Positives = 146/210 (69%), Gaps = 8/210 (3%)
Query: 19 NMIPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIK 78
N + ++VFKVV+IG+S VGK+ +LSRFT+NEF DS++TIGVEF TRTV + +K
Sbjct: 3 NRTDEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVK 62
Query: 79 AQIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIIL 138
AQIWDTAG ERYRA+TSAYYRGA+GA++V+D+TK Q++ V RW++EL HA+++I ++L
Sbjct: 63 AQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVML 122
Query: 139 IGNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKE- 197
+GNKSDL R V E+A FAE+ GL F E SAL+ NV+ AF +L+EI+ VSK++
Sbjct: 123 VGNKSDLSQAREVPTEEACMFAENNGLLFLETSALDSTNVELAFQTVLKEIFAKVSKQKQ 182
Query: 198 -------LECGNGKVDGPPMLAGSKIDVIS 220
+ GN + P L + IS
Sbjct: 183 NSTRTSAITLGNAQAGQDPGLGEKRACCIS 212
>gi|1279542|emb|CAA95859.1| small GTPase [Mangifera indica]
Length = 217
Score = 214 bits (545), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 111/214 (51%), Positives = 147/214 (68%), Gaps = 5/214 (2%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D DY+FKV +IGDS VGKS + RFT+NEF +SKSTIGVEF TR++ ++GK+IKAQIW
Sbjct: 8 DDYDYLFKVGLIGDSGVGKSNLALRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIW 67
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYD+T+ +F++V RW+ ELR H D +I ++LIGNK
Sbjct: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLIGNK 127
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
SDL + AVS ED AE + L F E SAL NVD AF +L + ++++ +
Sbjct: 128 SDLRHLVAVSTEDGNLLAERESLSFMETSALEATNVDNAFAEVLSKSTALLARRLWKLVI 187
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
D P KIDV ++S +KK+ CS
Sbjct: 188 IDQDAVPS-KSEKIDVSK----DVSAVKKVGCCS 216
>gi|82793187|ref|XP_727942.1| small GTPase Rab11 [Plasmodium yoelii yoelii 17XNL]
gi|23484033|gb|EAA19507.1| small GTPase rab11-related [Plasmodium yoelii yoelii]
Length = 172
Score = 214 bits (545), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 101/169 (59%), Positives = 136/169 (80%), Gaps = 1/169 (0%)
Query: 20 MIPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTI-NGKIIK 78
M D DY+FK+V+IGDS VGKS +LSRFT++EF +SKSTIGVEF T+++ + N KIIK
Sbjct: 3 MKEDYYDYLFKIVLIGDSGVGKSNLLSRFTRDEFNLESKSTIGVEFATKSIQLKNDKIIK 62
Query: 79 AQIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIIL 138
AQIWDTAGQERYRA+TSAYYRGA+GA++VYDITK+ +F+++ +W++ELR +ADS+I I+L
Sbjct: 63 AQIWDTAGQERYRAITSAYYRGAVGALLVYDITKKNTFENIEKWLKELRDNADSNIVILL 122
Query: 139 IGNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQ 187
+GNKSDL +R ++ DA +FA+ + L F E SAL NV+ AF +LL
Sbjct: 123 VGNKSDLKHLRVINDNDATQFAKKEKLAFIETSALEATNVELAFHQLLN 171
>gi|388494812|gb|AFK35472.1| unknown [Medicago truncatula]
Length = 215
Score = 214 bits (544), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 102/172 (59%), Positives = 136/172 (79%)
Query: 27 YVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTAG 86
Y+FK+V+IGDSAVGKS +LSRF +NEF +SK+TIGVE QT+ V I+GK +KAQIWDTAG
Sbjct: 12 YLFKIVLIGDSAVGKSNLLSRFARNEFDSNSKATIGVELQTQMVEIDGKEVKAQIWDTAG 71
Query: 87 QERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDLV 146
QER+RAVTSAYYRGA GA+VVYDI++R +F+ + RW++EL DS++ +L+GNK DL
Sbjct: 72 QERFRAVTSAYYRGAFGALVVYDISRRGTFESIKRWLDELTTQNDSTVARMLVGNKCDLE 131
Query: 147 DMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL 198
++R VS E+ AE++GLFF E SAL+ NV TAF +++EIY +S+K L
Sbjct: 132 NIREVSIEEGKALAEEEGLFFMETSALDSTNVQTAFEIVIREIYNNISRKVL 183
>gi|444721666|gb|ELW62390.1| Ras-related protein Rab-11A [Tupaia chinensis]
Length = 236
Score = 214 bits (544), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 102/161 (63%), Positives = 129/161 (80%)
Query: 31 VVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTAGQERY 90
VV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIWDTAGQERY
Sbjct: 7 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERY 66
Query: 91 RAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDLVDMRA 150
RA+TSAYYRGA+GA++VYDI K ++++V RW++ELR HADS+I I+L+GNKSDL +RA
Sbjct: 67 RAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRA 126
Query: 151 VSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYG 191
V ++A FAE GL F E SAL+ NV+ AF +L E G
Sbjct: 127 VPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEKNG 167
>gi|156086346|ref|XP_001610582.1| ras-related protein Rab11A [Babesia bovis T2Bo]
gi|154797835|gb|EDO07014.1| ras-related protein Rab11A [Babesia bovis]
Length = 212
Score = 213 bits (543), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 105/172 (61%), Positives = 130/172 (75%), Gaps = 2/172 (1%)
Query: 20 MIPDK-IDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTIN-GKII 77
M+ D+ DY+FK+V+IGDS VGKS +L RF K F DSKSTIGVEF T+TVT+N GKI
Sbjct: 1 MVADQSYDYLFKIVLIGDSNVGKSNLLDRFVKGNFKLDSKSTIGVEFATKTVTLNNGKIA 60
Query: 78 KAQIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRII 137
KAQIWDTAGQERYRA+TSAYYRGA+GA++VYDI + SF +V++W+ EL +ADS+I I
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAMGAIIVYDIACKTSFTNVSKWLTELHDYADSNITIC 120
Query: 138 LIGNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEI 189
L+GNKSDL +R V+ ED FA + L F E S LN +NVD AF LL +I
Sbjct: 121 LVGNKSDLTHLREVNKEDGEAFARENDLLFFETSCLNSENVDVAFKELLSKI 172
>gi|444719050|gb|ELW59850.1| Ras-related protein Rab-25 [Tupaia chinensis]
Length = 213
Score = 213 bits (542), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 101/178 (56%), Positives = 136/178 (76%)
Query: 19 NMIPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIK 78
N D ++VFKVV+IG+S VGK+ +LSRFT+NEF DS++TIGVEF TRTV + +K
Sbjct: 3 NGTEDDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVK 62
Query: 79 AQIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIIL 138
AQIWDTAG ERYRA+TSAYYRGA+GA++V+D+TK Q++ V RW++EL HA+++I ++L
Sbjct: 63 AQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVML 122
Query: 139 IGNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKK 196
+GNKSDL R V E+A FAE+ GL F E SAL+ NV+ AF +L+EI+ VSK+
Sbjct: 123 VGNKSDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQ 180
>gi|410927462|ref|XP_003977165.1| PREDICTED: ras-related protein Rab-25-like [Takifugu rubripes]
Length = 208
Score = 213 bits (542), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 107/195 (54%), Positives = 142/195 (72%), Gaps = 3/195 (1%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
++VFKVV+IG+S VGKS +LSR+TKNEF DS++TIGVEF TRTV +NG IKAQIWDTA
Sbjct: 8 NFVFKVVLIGESGVGKSNLLSRYTKNEFNHDSRTTIGVEFSTRTVELNGFTIKAQIWDTA 67
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
G ERYRA+TSAYYRGA+GA++VYDITK ++D + RW++EL HA+++I ++L+GNK+DL
Sbjct: 68 GLERYRAITSAYYRGAVGALLVYDITKHLTYDSMERWLKELYEHAEANIVVMLVGNKTDL 127
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNGKV 205
R+V E+A FAE+ L F E+SAL NV+ AF +L EI KEL G +
Sbjct: 128 ELERSVPTEEARGFAENHKLLFLESSALESTNVEAAFNNVLMEIQKKTHNKELVQGANR- 186
Query: 206 DGPPMLAGSKIDVIS 220
L SK ++I+
Sbjct: 187 --GVSLNSSKAEIIT 199
>gi|367013768|ref|XP_003681384.1| hypothetical protein TDEL_0D05890 [Torulaspora delbrueckii]
gi|359749044|emb|CCE92173.1| hypothetical protein TDEL_0D05890 [Torulaspora delbrueckii]
Length = 229
Score = 213 bits (542), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 108/207 (52%), Positives = 145/207 (70%), Gaps = 6/207 (2%)
Query: 31 VVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTAGQERY 90
VV+IGDS VGKS +LSRFT N+F +SKSTIGVEF TRT+ + GK IKAQIWDTAGQERY
Sbjct: 28 VVLIGDSGVGKSNLLSRFTTNDFNMESKSTIGVEFATRTIEVEGKKIKAQIWDTAGQERY 87
Query: 91 RAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDLVDMRA 150
RA+TSAYYRGA+GA++VYDI+K S+++ W+ ELR +AD ++ + LIGNKSDL +RA
Sbjct: 88 RAITSAYYRGAVGALIVYDISKPSSYENCNHWLTELRENADDNVAVGLIGNKSDLDHLRA 147
Query: 151 VSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNGKVDGPPM 210
V ++A FA++ L F+E SAL +NV+ AF L+ IY VSK +++ G+ + P
Sbjct: 148 VPTDEARNFAQENQLLFTETSALKSENVELAFRELITAIYQMVSKHQVDLGDSGNNNAP- 206
Query: 211 LAGSKIDVISGADLEISEMKKLSTCSC 237
G I + + E KK S+ +C
Sbjct: 207 -KGPTISLTPAPN----EHKKKSSGNC 228
>gi|224083990|ref|XP_002187600.1| PREDICTED: ras-related protein Rab-25 [Taeniopygia guttata]
Length = 213
Score = 213 bits (542), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 99/172 (57%), Positives = 136/172 (79%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
++VFKVV+IG+S VGK+ +LSRFT+NEF DS++TIGVEF TRT+ + ++KAQIWDTA
Sbjct: 9 NFVFKVVLIGESGVGKTNLLSRFTRNEFNHDSRTTIGVEFSTRTILVGDAVVKAQIWDTA 68
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
G ERYRA+TSAYYRGA+GA+VV+DITK Q++D V RW++EL HA++SI ++L+GNK+DL
Sbjct: 69 GLERYRAITSAYYRGAVGALVVFDITKHQTYDVVDRWLKELYDHAEASIVVMLVGNKTDL 128
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKE 197
R V E+A FA++ GL F E SAL+ NV+ AF +L+EI+ V K++
Sbjct: 129 AQAREVPMEEAKMFADNNGLLFVETSALDSTNVEEAFETILKEIFYKVQKQK 180
>gi|31980838|ref|NP_058595.2| ras-related protein Rab-25 [Mus musculus]
gi|46397889|sp|Q9WTL2.2|RAB25_MOUSE RecName: Full=Ras-related protein Rab-25; Flags: Precursor
gi|12833818|dbj|BAB22676.1| unnamed protein product [Mus musculus]
gi|13879300|gb|AAH06624.1| RAB25, member RAS oncogene family [Mus musculus]
gi|112293009|dbj|BAF02882.1| Rab25 [Mus musculus]
gi|148683327|gb|EDL15274.1| RAB25, member RAS oncogene family, isoform CRA_b [Mus musculus]
Length = 213
Score = 213 bits (542), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 100/179 (55%), Positives = 137/179 (76%)
Query: 19 NMIPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIK 78
N + ++VFKVV+IG+S VGK+ +LSRFT+NEF DS++TIGVEF TRTV + +K
Sbjct: 3 NRTDEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVK 62
Query: 79 AQIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIIL 138
AQIWDTAG ERYRA+TSAYYRGA+GA++V+D+TK Q++ V RW++EL HA+++I ++L
Sbjct: 63 AQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVML 122
Query: 139 IGNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKE 197
+GNKSDL R V E+A FAE+ GL F E SAL+ NV+ AF +L+EI+ VSK++
Sbjct: 123 VGNKSDLSQAREVPTEEACMFAENNGLLFLETSALDSTNVELAFQTVLKEIFAKVSKQK 181
>gi|302505565|ref|XP_003014489.1| hypothetical protein ARB_07051 [Arthroderma benhamiae CBS 112371]
gi|302656407|ref|XP_003019957.1| hypothetical protein TRV_06003 [Trichophyton verrucosum HKI 0517]
gi|291178310|gb|EFE34100.1| hypothetical protein ARB_07051 [Arthroderma benhamiae CBS 112371]
gi|291183734|gb|EFE39333.1| hypothetical protein TRV_06003 [Trichophyton verrucosum HKI 0517]
Length = 230
Score = 213 bits (541), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 108/189 (57%), Positives = 139/189 (73%), Gaps = 13/189 (6%)
Query: 31 VVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTAGQERY 90
VV+IGDS VGKS +LSRFT+NEF DSKSTIGVEF TR++ ++ K IK+QIWDTAGQERY
Sbjct: 19 VVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKSQIWDTAGQERY 78
Query: 91 RAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDLVDMRA 150
RA+TSAYYRGA+GA++VYD++K Q++++V RW++ELR HADS+I I+L+GNKSDL +RA
Sbjct: 79 RAITSAYYRGAVGALLVYDVSKHQTYENVTRWLKELRDHADSNIVIMLVGNKSDLRHLRA 138
Query: 151 VSAEDAVEFAEDQ---------GLFFSEASALNGDNVDTAFFR----LLQEIYGAVSKKE 197
V E+A +FA Q L F E SAL+ NV+ AF LL EI+ VS K
Sbjct: 139 VPTEEAKQFAIPQLTLMVLGENNLSFIETSALDASNVELAFQNILTDLLAEIFRIVSSKA 198
Query: 198 LECGNGKVD 206
LE G+ +
Sbjct: 199 LESGDSSAN 207
>gi|432910564|ref|XP_004078416.1| PREDICTED: ras-related protein Rab-25-like [Oryzias latipes]
Length = 208
Score = 213 bits (541), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 103/176 (58%), Positives = 135/176 (76%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
++VFKVV+IG+S VGKS +LSRFTKNEF DS++TIGVEF TRTV +N IKAQIWDTA
Sbjct: 8 NFVFKVVLIGESGVGKSNLLSRFTKNEFSHDSRTTIGVEFSTRTVQLNSFTIKAQIWDTA 67
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
G ERYRA+TSAYYRGA+GA++VYDITK +++ V RW++EL HAD + ++L+GNK+DL
Sbjct: 68 GLERYRAITSAYYRGAVGALLVYDITKHLTYESVERWLKELLDHADQHMVVMLVGNKTDL 127
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECG 201
R+V +E+A +FA+ GL F E SAL NV+ AF +L EI+ VS +E+ G
Sbjct: 128 ESERSVPSEEAKDFADKNGLMFLETSALESTNVEAAFNGVLAEIHRKVSSREVLRG 183
>gi|410986758|ref|XP_003999676.1| PREDICTED: ras-related protein Rab-25 [Felis catus]
Length = 213
Score = 213 bits (541), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 101/178 (56%), Positives = 136/178 (76%)
Query: 19 NMIPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIK 78
N + ++VFKVV+IG+S VGK+ +LSRFT+NEF DS++TIGVEF TRTV + IK
Sbjct: 3 NRTEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAIK 62
Query: 79 AQIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIIL 138
AQIWDTAG ERYRA+TSAYYRGA+GA++V+D+TK Q++ V RW++EL HA+++I ++L
Sbjct: 63 AQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVML 122
Query: 139 IGNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKK 196
+GNKSDL R V E+A FAE+ GL F E SAL+ NV+ AF +L+EI+ VSK+
Sbjct: 123 VGNKSDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQ 180
>gi|156406695|ref|XP_001641180.1| predicted protein [Nematostella vectensis]
gi|156228318|gb|EDO49117.1| predicted protein [Nematostella vectensis]
Length = 234
Score = 213 bits (541), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 102/177 (57%), Positives = 126/177 (71%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D DY+FK+V+IGDS VGKS +LSR+TKNEF SK+TIGVE R V I GK ++AQIW
Sbjct: 13 DNYDYLFKIVLIGDSGVGKSNLLSRYTKNEFHLGSKATIGVELAHRNVEIEGKTVRAQIW 72
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GAV+VYDI K SF ++ +WVEELR HA + IILIGNK
Sbjct: 73 DTAGQERYRAITSAYYRGAMGAVLVYDIAKGTSFMNLNKWVEELRQHASDDLSIILIGNK 132
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELE 199
SDL +R + +FA + G+ F E SAL+ NV AF + I+ V + ELE
Sbjct: 133 SDLKHLRMIENRRGKQFAAEHGMLFMETSALDSTNVAEAFEFIFAHIFDKVRQNELE 189
>gi|50980854|gb|AAT91273.1| GTPase [Paxillus involutus]
gi|50980856|gb|AAT91274.1| GTPase [Paxillus involutus]
Length = 161
Score = 213 bits (541), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 99/160 (61%), Positives = 131/160 (81%)
Query: 31 VVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTAGQERY 90
VV+IGDS VGKS +LSRFT+NEF DSKSTIGVEF TR+++++GK +KAQIWDTAGQERY
Sbjct: 1 VVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSISVDGKTVKAQIWDTAGQERY 60
Query: 91 RAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDLVDMRA 150
RA+TSAYYRGA+GA++VYDI+K ++ +V RW++ELR HADS+I I+L+GNKSDL +RA
Sbjct: 61 RAITSAYYRGAVGALLVYDISKHATYVNVTRWLKELRDHADSNIVIMLVGNKSDLKHLRA 120
Query: 151 VSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIY 190
V E+A F+ + L F E SAL+ NV++AF +L ++Y
Sbjct: 121 VPTEEAKNFSTENELSFIETSALDASNVESAFQTILTDVY 160
>gi|488700|emb|CAA55865.1| Rab [Medicago sativa]
Length = 217
Score = 212 bits (540), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 110/215 (51%), Positives = 148/215 (68%), Gaps = 7/215 (3%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D DY+FKVV+IGDS VGKS +LSRFTKNEF +SKSTIGVEF TRT+ ++ K+IKAQIW
Sbjct: 8 DDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSKVIKAQIW 67
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYD+T+ +F++V + E +L+GNK
Sbjct: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHGTFENVRQMAERTAKPHRFQHCCVLVGNK 127
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECG- 201
+DL + AVS ED +AE + L+F E SAL NV+ +F +L +IY +SKK +E
Sbjct: 128 ADLRHLVAVSTEDGKSYAEKESLYFMETSALEATNVENSFAEVLTQIYRILSKKAVEGAE 187
Query: 202 NGKVDGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
NG P G KID+ + ++S +K++ CS
Sbjct: 188 NGNASVPA--KGEKIDLKN----DVSALKRVGCCS 216
>gi|395845171|ref|XP_003795316.1| PREDICTED: ras-related protein Rab-25 [Otolemur garnettii]
Length = 213
Score = 212 bits (540), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 101/178 (56%), Positives = 136/178 (76%)
Query: 19 NMIPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIK 78
N + ++VFKVV+IG+S VGK+ +LSRFT+NEF DS++TIGVEF TRTV + IK
Sbjct: 3 NGTEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAIK 62
Query: 79 AQIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIIL 138
AQIWDTAG ERYRA+TSAYYRGA+GA++V+D+TK Q++ V RW++EL HA+++I ++L
Sbjct: 63 AQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYSVVERWLKELYDHAEATIVVML 122
Query: 139 IGNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKK 196
+GNKSDL R V E+A FAE+ GL F E SAL+ NV+ AF +L+EI+ VSK+
Sbjct: 123 VGNKSDLSRAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQ 180
>gi|164518908|ref|NP_001101157.2| ras-related protein Rab-25 [Rattus norvegicus]
gi|149048128|gb|EDM00704.1| RAB25, member RAS oncogene family (predicted), isoform CRA_b
[Rattus norvegicus]
gi|197246783|gb|AAI68745.1| RAB25, member RAS oncogene family [Rattus norvegicus]
Length = 213
Score = 212 bits (540), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 100/178 (56%), Positives = 136/178 (76%)
Query: 19 NMIPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIK 78
N + ++VFKVV+IG+S VGK+ +LSRFT+NEF DS++TIGVEF TRTV + +K
Sbjct: 3 NRTDEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVK 62
Query: 79 AQIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIIL 138
AQIWDTAG ERYRA+TSAYYRGA+GA++V+D+TK Q++ V RW++EL HA+++I ++L
Sbjct: 63 AQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVML 122
Query: 139 IGNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKK 196
+GNKSDL R V E+A FAE+ GL F E SAL+ NV+ AF +L+EI+ VSK+
Sbjct: 123 VGNKSDLSQAREVPTEEACMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQ 180
>gi|354459567|pdb|3RWM|B Chain B, Crystal Structure Of Ypt32 In Complex With Gppnhp
gi|354459568|pdb|3RWO|B Chain B, Crystal Structure Of Ypt32 In Complex With Gdp
gi|354459569|pdb|3RWO|A Chain A, Crystal Structure Of Ypt32 In Complex With Gdp
Length = 185
Score = 212 bits (540), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 101/175 (57%), Positives = 133/175 (76%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
DY+FK+V+IGDS VGKS +LSRFT +EF +SKSTIGVEF TRT+ + K IKAQIWDTA
Sbjct: 8 DYLFKIVLIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEVENKKIKAQIWDTA 67
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
G ERYRA+TSAYYRGA+GA++VYDI+K S+++ W+ ELR +AD ++ + LIGNKSDL
Sbjct: 68 GLERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLTELRENADDNVAVGLIGNKSDL 127
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELEC 200
+RAV ++A FA + + F+E SALN DNVD AF L+ I+ VSK +++
Sbjct: 128 AHLRAVPTDEAKNFAMENQMLFTETSALNSDNVDKAFRELIVAIFQMVSKHQVDL 182
>gi|62988286|ref|NP_001017936.1| ras-related protein Rab-25 [Bos taurus]
gi|75069882|sp|Q58DW6.1|RAB25_BOVIN RecName: Full=Ras-related protein Rab-25; Flags: Precursor
gi|61552966|gb|AAX46328.1| RAB25 [Bos taurus]
gi|296489661|tpg|DAA31774.1| TPA: ras-related protein Rab-25 [Bos taurus]
Length = 213
Score = 212 bits (539), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 101/178 (56%), Positives = 136/178 (76%)
Query: 19 NMIPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIK 78
N + ++VFKVV+IG+S VGK+ +LSRFT+NEF DS++TIGVEF TRTV + IK
Sbjct: 3 NRAEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAIK 62
Query: 79 AQIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIIL 138
AQIWDTAG ERYRA+TSAYYRGA+GA++V+D+TK Q++ V RW++EL HA+++I ++L
Sbjct: 63 AQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVML 122
Query: 139 IGNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKK 196
+GNKSDL R V E+A FAE+ GL F E SAL+ NV+ AF +L+EI+ VSK+
Sbjct: 123 VGNKSDLSQSREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQ 180
>gi|182890006|gb|AAI65926.1| Rab25 protein [Danio rerio]
Length = 210
Score = 212 bits (539), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 103/189 (54%), Positives = 138/189 (73%), Gaps = 6/189 (3%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
++VFKVV+IG+S VGKS +LSRFTKNEF DS++TIGVEF TR+V ++ IKAQIWDTA
Sbjct: 8 NFVFKVVLIGESGVGKSNLLSRFTKNEFNHDSRTTIGVEFSTRSVQVDSITIKAQIWDTA 67
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
G ERYRA+TSAYYRGA+GA++VYDITK +++ V RW++EL HAD I ++L+GNK+DL
Sbjct: 68 GLERYRAITSAYYRGAVGALLVYDITKHLTYESVERWLKELYDHADPHIVVMLVGNKNDL 127
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN--- 202
+R V E+A +FA+ L F E SAL NV++AF +L I+ V+ KE+ G+
Sbjct: 128 ATVRTVPTEEAKDFADANDLLFMETSALESTNVESAFLEVLTAIHQKVASKEVTRGSISA 187
Query: 203 ---GKVDGP 208
G+ GP
Sbjct: 188 VTLGQTHGP 196
>gi|397628535|gb|EJK68942.1| hypothetical protein THAOC_09841 [Thalassiosira oceanica]
Length = 229
Score = 212 bits (539), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 113/220 (51%), Positives = 152/220 (69%), Gaps = 10/220 (4%)
Query: 20 MIPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTI-NGKIIK 78
M + D++FK+V++GDS VGKS ++ RFTKNEF DSKSTIGVEF T+TV I + K++K
Sbjct: 1 MDSESYDFIFKIVLLGDSGVGKSNLVFRFTKNEFNKDSKSTIGVEFATKTVQIEDDKLVK 60
Query: 79 AQIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIIL 138
AQIWDTAGQERYR++ S+YYRGA+GA++VYD+T R SF+HV W++E+ +A+ I+L
Sbjct: 61 AQIWDTAGQERYRSIASSYYRGAVGALLVYDVTDRNSFNHVPMWLKEVEENAEKDCLIML 120
Query: 139 IGNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL 198
+GNK DL + R V D FA GL F E SAL+ VDTAF R+LQEIY +KK+L
Sbjct: 121 VGNKMDLHEQRTVFVRDGRSFARKNGLAFIETSALDATGVDTAFQRILQEIYKTQTKKQL 180
Query: 199 EC--GNGKVD---GPPMLAGSKIDVISGAD--LEISEMKK 231
+ G GK GP AG I + + A+ ++ +MKK
Sbjct: 181 KSQGGGGKAPAKTGPK--AGQTISLSASANETVDNPQMKK 218
>gi|345802588|ref|XP_547540.3| PREDICTED: ras-related protein Rab-25 [Canis lupus familiaris]
gi|334350816|sp|E2RQ15.1|RAB25_CANFA RecName: Full=Ras-related protein Rab-25; Flags: Precursor
Length = 213
Score = 212 bits (539), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 101/178 (56%), Positives = 136/178 (76%)
Query: 19 NMIPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIK 78
N + ++VFKVV+IG+S VGK+ +LSRFT+NEF DS++TIGVEF TRTV + IK
Sbjct: 3 NRTEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAIK 62
Query: 79 AQIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIIL 138
AQIWDTAG ERYRA+TSAYYRGA+GA++V+D+TK Q++ V RW++EL HA+++I ++L
Sbjct: 63 AQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVML 122
Query: 139 IGNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKK 196
+GNKSDL R V E+A FAE+ GL F E SAL+ NV+ AF +L+EI+ VSK+
Sbjct: 123 VGNKSDLHQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFTKVSKQ 180
>gi|384484365|gb|EIE76545.1| GTP-binding protein [Rhizopus delemar RA 99-880]
Length = 223
Score = 212 bits (539), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 104/197 (52%), Positives = 138/197 (70%), Gaps = 3/197 (1%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FK+V+IGDS VGKS +LSRFT NEF +SKSTIGVEF T+ + I+ +KAQIW
Sbjct: 3 DEYDYLFKLVLIGDSGVGKSNLLSRFTTNEFNLESKSTIGVEFATKNLEIDNHTVKAQIW 62
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DT+GQERYRA+T AYYRGA+GA++VYDIT++ SF +V W++ELR HAD +I I+L+GNK
Sbjct: 63 DTSGQERYRAITGAYYRGAVGALLVYDITRQSSFQNVQHWLKELRDHADPNIVIMLVGNK 122
Query: 143 SDLVD-MRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECG 201
DL + R V+ ED AE +G F E SAL+ NVD AF + IY + KK +
Sbjct: 123 VDLSESSRQVTTEDGGSLAEQEGFLFVETSALDATNVDKAFATVFDTIYSNLPKKTNQSA 182
Query: 202 NGKVDGPPMLAGSKIDV 218
+ + P AG +I +
Sbjct: 183 DAATNQP--TAGERIQL 197
>gi|111305025|gb|AAI20092.1| RAB25, member RAS oncogene family [Bos taurus]
Length = 213
Score = 212 bits (539), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 101/178 (56%), Positives = 136/178 (76%)
Query: 19 NMIPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIK 78
N + ++VFKVV+IG+S VGK+ +LSRFT+NEF DS++TIGVEF TRTV + IK
Sbjct: 3 NRAEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAIK 62
Query: 79 AQIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIIL 138
AQIWDTAG ERYRA+TSAYYRGA+GA++V+D+TK Q++ V RW++EL HA+++I ++L
Sbjct: 63 AQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVML 122
Query: 139 IGNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKK 196
+GNKSDL R V E+A FAE+ GL F E SAL+ NV+ AF +L+EI+ VSK+
Sbjct: 123 VGNKSDLSQSREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQ 180
>gi|21634443|gb|AAM69362.1|AF274025_1 GTP-binding protein Rab25 [Homo sapiens]
Length = 217
Score = 212 bits (539), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 100/178 (56%), Positives = 136/178 (76%)
Query: 19 NMIPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIK 78
N + ++VFKVV+IG+S VGK+ +LSRFT+NEF DS++TIGVEF TRTV + +K
Sbjct: 7 NGTEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVK 66
Query: 79 AQIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIIL 138
AQIWDTAG ERYRA+TSAYYRGA+GA++V+D+TK Q++ V RW++EL HA+++I ++L
Sbjct: 67 AQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVML 126
Query: 139 IGNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKK 196
+GNKSDL R V E+A FAE+ GL F E SAL+ NV+ AF +L+EI+ VSK+
Sbjct: 127 VGNKSDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQ 184
>gi|354481560|ref|XP_003502969.1| PREDICTED: ras-related protein Rab-25-like [Cricetulus griseus]
Length = 213
Score = 211 bits (538), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 99/171 (57%), Positives = 134/171 (78%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
++VFKVV+IG+S VGK+ +LSRFT+NEF DS++TIGVEF TRTV + +KAQIWDTA
Sbjct: 10 NFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTA 69
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
G ERYRA+TSAYYRGA+GA++V+D+TK Q++ V RW++EL HA+++I ++L+GNKSDL
Sbjct: 70 GLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDL 129
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKK 196
R V E+A FAE+ GL F E SAL+ NV+ AF +L+EI+ VSK+
Sbjct: 130 SQAREVPTEEACMFAENNGLLFLETSALDSTNVELAFQTVLKEIFAKVSKQ 180
>gi|426216816|ref|XP_004002653.1| PREDICTED: ras-related protein Rab-25 [Ovis aries]
Length = 213
Score = 211 bits (538), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 101/178 (56%), Positives = 136/178 (76%)
Query: 19 NMIPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIK 78
N + ++VFKVV+IG+S VGK+ +LSRFT+NEF DS++TIGVEF TRTV + IK
Sbjct: 3 NRAEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAIK 62
Query: 79 AQIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIIL 138
AQIWDTAG ERYRA+TSAYYRGA+GA++V+D+TK Q++ V RW++EL HA+++I ++L
Sbjct: 63 AQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVML 122
Query: 139 IGNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKK 196
+GNKSDL R V E+A FAE+ GL F E SAL+ NV+ AF +L+EI+ VSK+
Sbjct: 123 VGNKSDLSQSREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLREIFAKVSKQ 180
>gi|297663252|ref|XP_002810088.1| PREDICTED: ras-related protein Rab-25 [Pongo abelii]
Length = 213
Score = 211 bits (538), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 100/178 (56%), Positives = 136/178 (76%)
Query: 19 NMIPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIK 78
N + ++VFKVV+IG+S VGK+ +LSRFT+NEF DS++TIGVEF TRTV + +K
Sbjct: 3 NGTEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVK 62
Query: 79 AQIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIIL 138
AQIWDTAG ERYRA+TSAYYRGA+GA++V+D+TK Q++ V RW++EL HA+++I ++L
Sbjct: 63 AQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVML 122
Query: 139 IGNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKK 196
+GNKSDL R V E+A FAE+ GL F E SAL+ NV+ AF +L+EI+ VSK+
Sbjct: 123 VGNKSDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQ 180
>gi|116812567|ref|NP_065120.2| ras-related protein Rab-25 [Homo sapiens]
gi|109017309|ref|XP_001116371.1| PREDICTED: ras-related protein Rab-25 isoform 2 [Macaca mulatta]
gi|114560206|ref|XP_001163533.1| PREDICTED: ras-related protein Rab-25 isoform 1 [Pan troglodytes]
gi|332220700|ref|XP_003259492.1| PREDICTED: ras-related protein Rab-25 [Nomascus leucogenys]
gi|397500869|ref|XP_003821127.1| PREDICTED: ras-related protein Rab-25 [Pan paniscus]
gi|402856560|ref|XP_003892855.1| PREDICTED: ras-related protein Rab-25 isoform 1 [Papio anubis]
gi|402856562|ref|XP_003892856.1| PREDICTED: ras-related protein Rab-25 isoform 2 [Papio anubis]
gi|426332033|ref|XP_004026997.1| PREDICTED: ras-related protein Rab-25 [Gorilla gorilla gorilla]
gi|46577696|sp|P57735.2|RAB25_HUMAN RecName: Full=Ras-related protein Rab-25; AltName: Full=CATX-8;
Flags: Precursor
gi|14602627|gb|AAH09831.1| RAB25, member RAS oncogene family [Homo sapiens]
gi|23273871|gb|AAH33322.1| RAB25, member RAS oncogene family [Homo sapiens]
gi|119573388|gb|EAW53003.1| RAB25, member RAS oncogene family [Homo sapiens]
gi|190689945|gb|ACE86747.1| RAB25, member RAS oncogene family protein [synthetic construct]
gi|190691317|gb|ACE87433.1| RAB25, member RAS oncogene family protein [synthetic construct]
gi|261858756|dbj|BAI45900.1| RAB25, member RAS oncogene family [synthetic construct]
gi|312153252|gb|ADQ33138.1| RAB25, member RAS oncogene family [synthetic construct]
gi|355558553|gb|EHH15333.1| hypothetical protein EGK_01407 [Macaca mulatta]
gi|355745732|gb|EHH50357.1| hypothetical protein EGM_01173 [Macaca fascicularis]
Length = 213
Score = 211 bits (538), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 100/178 (56%), Positives = 136/178 (76%)
Query: 19 NMIPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIK 78
N + ++VFKVV+IG+S VGK+ +LSRFT+NEF DS++TIGVEF TRTV + +K
Sbjct: 3 NGTEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVK 62
Query: 79 AQIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIIL 138
AQIWDTAG ERYRA+TSAYYRGA+GA++V+D+TK Q++ V RW++EL HA+++I ++L
Sbjct: 63 AQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVML 122
Query: 139 IGNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKK 196
+GNKSDL R V E+A FAE+ GL F E SAL+ NV+ AF +L+EI+ VSK+
Sbjct: 123 VGNKSDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQ 180
>gi|449281797|gb|EMC88784.1| Ras-related protein Rab-25 [Columba livia]
Length = 213
Score = 211 bits (538), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 97/172 (56%), Positives = 136/172 (79%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
++VFKVV+IG+S VGK+ +LSRFT+NEF DS++TIGVEF TRT+ + ++KAQIWDTA
Sbjct: 9 NFVFKVVLIGESGVGKTNLLSRFTRNEFNHDSRTTIGVEFSTRTIMVGDAVVKAQIWDTA 68
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
G ERYRA+TSAYYRGA+GA+VV+DITK Q++D V RW++EL HA+++I ++L+GNK+DL
Sbjct: 69 GLERYRAITSAYYRGAVGALVVFDITKHQTYDVVERWLKELYDHAEANIVVMLVGNKTDL 128
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKE 197
R V E+A FA++ GL F E SAL+ NV+ AF +L+EI+ V +++
Sbjct: 129 AQAREVPMEEAKMFADNNGLLFVETSALDSTNVEQAFETILKEIFHKVQQQK 180
>gi|149751384|ref|XP_001499799.1| PREDICTED: ras-related protein Rab-25-like [Equus caballus]
Length = 213
Score = 211 bits (537), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 99/171 (57%), Positives = 134/171 (78%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
++VFKVV+IG+S VGK+ +LSRFT+NEF DS++TIGVEF TRTV + +KAQIWDTA
Sbjct: 10 NFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTA 69
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
G ERYRA+TSAYYRGA+GA++V+D+TK Q++ V RW++EL HA+++I ++L+GNKSDL
Sbjct: 70 GLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDL 129
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKK 196
R V E+A FAE+ GL F E SAL+ NV+ AF +L+EI+ VSK+
Sbjct: 130 SQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQ 180
>gi|291397790|ref|XP_002715439.1| PREDICTED: RAB25, member RAS oncogene family [Oryctolagus
cuniculus]
Length = 213
Score = 211 bits (537), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 100/178 (56%), Positives = 136/178 (76%)
Query: 19 NMIPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIK 78
N + ++VFKVV+IG+S VGK+ +LSRFT+NEF DS++TIGVEF TRTV + +K
Sbjct: 3 NGTEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVLLGTAAVK 62
Query: 79 AQIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIIL 138
AQIWDTAG ERYRA+TSAYYRGA+GA++V+D+TK Q++ V RW++EL HA+++I ++L
Sbjct: 63 AQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVML 122
Query: 139 IGNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKK 196
+GNKSDL R V E+A FAE+ GL F E SAL+ NV+ AF +L+EI+ VSK+
Sbjct: 123 VGNKSDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQ 180
>gi|9789019|gb|AAF98238.1| unknown [Homo sapiens]
Length = 256
Score = 211 bits (537), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 99/171 (57%), Positives = 134/171 (78%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
++VFKVV+IG+S VGK+ +LSRFT+NEF DS++TIGVEF TRTV + +KAQIWDTA
Sbjct: 10 NFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTA 69
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
G ERYRA+TSAYYRGA+GA++V+D+TK Q++ V RW++EL HA+++I ++L+GNKSDL
Sbjct: 70 GLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDL 129
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKK 196
R V E+A FAE+ GL F E SAL+ NV+ AF +L+EI+ VSK+
Sbjct: 130 SQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQ 180
>gi|405952895|gb|EKC20651.1| Ras-related protein Rab-11A [Crassostrea gigas]
Length = 234
Score = 211 bits (537), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 103/217 (47%), Positives = 150/217 (69%), Gaps = 8/217 (3%)
Query: 19 NMIPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIK 78
N D+ DY+ KVV+ GDS VGK+ +LSRFT+NEF +S+STIGVEF TR+V I+GK +K
Sbjct: 22 NYSEDEYDYLAKVVLTGDSGVGKTNLLSRFTRNEFSLESRSTIGVEFATRSVHIDGKTLK 81
Query: 79 AQIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIIL 138
AQIWDTAGQ+RYRA+T+AYYR A+G + VYDI KR +FD++ +W++E R D + ++L
Sbjct: 82 AQIWDTAGQDRYRAITNAYYRKAVGVIFVYDIAKRPTFDNLDKWLKEARNFTDDDVILML 141
Query: 139 IGNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL 198
+GNK+DL +RAVS+++A +AE + + E SAL+ +VD AF +L+EIY +S+K L
Sbjct: 142 VGNKTDLRHLRAVSSQEARSYAEKNNMSYIETSALDCTHVDLAFQSILKEIYSTISQKGL 201
Query: 199 ECGNGKVDGPPMLAGSKIDVISGADLEISEMKKLSTC 235
+ G + P V+ D+ I+E ++ C
Sbjct: 202 KDDTGGFNLPS--------VVDSMDIGITETEEKRKC 230
>gi|1172845|sp|P46629.1|RAB25_RABIT RecName: Full=Ras-related protein Rab-25; Flags: Precursor
gi|436001|gb|AAA31261.1| small GTP-binding protein, partial [Oryctolagus cuniculus]
Length = 213
Score = 211 bits (537), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 99/171 (57%), Positives = 134/171 (78%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
++VFKVV+IG+S VGK+ +LSRFT+NEF DS++TIGVEF TRTV + +KAQIWDTA
Sbjct: 10 NFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVLLGTAAVKAQIWDTA 69
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
G ERYRA+TSAYYRGA+GA++V+D+TK Q++ V RW++EL HA+++I ++L+GNKSDL
Sbjct: 70 GLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDL 129
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKK 196
R V E+A FAE+ GL F E SAL+ NV+ AF +L+EI+ VSK+
Sbjct: 130 SQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQ 180
>gi|348579815|ref|XP_003475674.1| PREDICTED: ras-related protein Rab-25-like [Cavia porcellus]
Length = 213
Score = 211 bits (537), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 100/174 (57%), Positives = 135/174 (77%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D ++VFKVV+IG+S VGK+ +LSRFT+NEF DS++TIGVEF TRTV + IKAQIW
Sbjct: 7 DDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAIKAQIW 66
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAG ERYRA+TSAYYRGA+GA++V+D+TK Q++ V RW++EL HA+++I ++L+GNK
Sbjct: 67 DTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNK 126
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKK 196
SDL R V ++A FAE+ GL F E SAL+ NV+ AF +L+EI+ VSK+
Sbjct: 127 SDLSQAREVPTDEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQ 180
>gi|301783133|ref|XP_002926982.1| PREDICTED: ras-related protein Rab-25-like [Ailuropoda melanoleuca]
Length = 213
Score = 211 bits (537), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 100/178 (56%), Positives = 136/178 (76%)
Query: 19 NMIPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIK 78
N + ++VFKVV+IG+S VGK+ +LSRFT+NEF DS++TIGVEF TRTV + +K
Sbjct: 3 NRAEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVK 62
Query: 79 AQIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIIL 138
AQIWDTAG ERYRA+TSAYYRGA+GA++V+D+TK Q++ V RW++EL HA+++I ++L
Sbjct: 63 AQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVML 122
Query: 139 IGNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKK 196
+GNKSDL R V E+A FAE+ GL F E SAL+ NV+ AF +L+EI+ VSK+
Sbjct: 123 VGNKSDLQQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFTKVSKQ 180
>gi|405944797|pdb|3TSO|A Chain A, Structure Of The Cancer Associated Rab25 Protein In
Complex With Fip2
gi|405944798|pdb|3TSO|B Chain B, Structure Of The Cancer Associated Rab25 Protein In
Complex With Fip2
Length = 178
Score = 211 bits (536), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 99/171 (57%), Positives = 134/171 (78%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
++VFKVV+IG+S VGK+ +LSRFT+NEF DS++TIGVEF TRTV + +KAQIWDTA
Sbjct: 8 NFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTA 67
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
G ERYRA+TSAYYRGA+GA++V+D+TK Q++ V RW++EL HA+++I ++L+GNKSDL
Sbjct: 68 GLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDL 127
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKK 196
R V E+A FAE+ GL F E SAL+ NV+ AF +L+EI+ VSK+
Sbjct: 128 SQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQ 178
>gi|224135525|ref|XP_002322095.1| predicted protein [Populus trichocarpa]
gi|222869091|gb|EEF06222.1| predicted protein [Populus trichocarpa]
Length = 222
Score = 211 bits (536), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 103/213 (48%), Positives = 144/213 (67%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
++ DY+FK V+IGDSAVGKS +LSRF+++EF DSK TIGVEF R + + K+IKAQIW
Sbjct: 7 EECDYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIW 66
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQER+RA+TS+YYRGALGA++VYDIT+R +FD+V +W+ ELR S + ++L+GNK
Sbjct: 67 DTAGQERFRAITSSYYRGALGALLVYDITRRATFDNVKKWLHELRDFGSSDMVVVLVGNK 126
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
SD+ +R V +D AE + L+F E SAL NV+ AF +++ I+ S+K LE
Sbjct: 127 SDISHLREVDEDDGKNLAETEALYFMETSALENLNVEEAFMQMITRIHEIASQKSLEAKK 186
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLSTC 235
+ + A + D E+S K+ S C
Sbjct: 187 NETTISTIKALPVGKEVINIDDEVSATKQASYC 219
>gi|296229146|ref|XP_002760046.1| PREDICTED: ras-related protein Rab-25 [Callithrix jacchus]
Length = 213
Score = 211 bits (536), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 100/178 (56%), Positives = 136/178 (76%)
Query: 19 NMIPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIK 78
N + ++VFKVV+IG+S VGK+ +LSRFT+NEF DS++TIGVEF TRTV + +K
Sbjct: 3 NGTEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVK 62
Query: 79 AQIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIIL 138
AQIWDTAG ERYRA+TSAYYRGA+GA++V+D+TK Q++ V RW++EL HA+++I ++L
Sbjct: 63 AQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVML 122
Query: 139 IGNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKK 196
+GNKSDL R V E+A FAE+ GL F E SAL+ NV+ AF +L+EI+ VSK+
Sbjct: 123 VGNKSDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFEKVSKQ 180
>gi|126031605|pdb|2OIL|A Chain A, Crystal Structure Of Human Rab25 In Complex With Gdp
Length = 193
Score = 210 bits (535), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 100/180 (55%), Positives = 138/180 (76%), Gaps = 3/180 (1%)
Query: 20 MIP---DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKI 76
++P + ++VFKVV+IG+S VGK+ +LSRFT+NEF DS++TIGVEF TRTV +
Sbjct: 14 LVPRGSEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAA 73
Query: 77 IKAQIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRI 136
+KAQIWDTAG ERYRA+TSAYYRGA+GA++V+D+TK Q++ V RW++EL HA+++I +
Sbjct: 74 VKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVV 133
Query: 137 ILIGNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKK 196
+L+GNKSDL R V E+A FAE+ GL F E SAL+ NV+ AF +L+EI+ VSK+
Sbjct: 134 MLVGNKSDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQ 193
>gi|328876805|gb|EGG25168.1| Rab GTPase [Dictyostelium fasciculatum]
Length = 221
Score = 210 bits (535), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 105/220 (47%), Positives = 149/220 (67%), Gaps = 2/220 (0%)
Query: 20 MIPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKA 79
M ++ DY+FK+V+IGDSAVGKS +L+RFT+NEF +K+TIGV+F T+++ I GK+I A
Sbjct: 1 MREEENDYLFKIVIIGDSAVGKSNLLNRFTRNEFTEKTKATIGVDFGTKSIEIEGKVITA 60
Query: 80 QIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILI 139
Q WDTAGQER+RAVTS YYRGALGA++VYDIT + SF +V RW+ ELR A+ I ++++
Sbjct: 61 QCWDTAGQERFRAVTSGYYRGALGAMIVYDITSKISFKNVTRWLNELREMAEPDILVMMV 120
Query: 140 GNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELE 199
GNKSDL R VS +A FAE + F E SALN NV+ +F +LL +IY +K+ +
Sbjct: 121 GNKSDLESSREVSTREAQSFAEANKISFLETSALNSTNVNLSFEKLLTDIYNQFGQKKAQ 180
Query: 200 C--GNGKVDGPPMLAGSKIDVISGADLEISEMKKLSTCSC 237
+G+ P +G KI ++ A + ++ + C
Sbjct: 181 VVMDDGQEWLKPTQSGQKITPLNEAPVNVTSTHQEPKKGC 220
>gi|58267306|ref|XP_570809.1| ras-related protein ypt3 (rab) [Cryptococcus neoformans var.
neoformans JEC21]
gi|57227043|gb|AAW43502.1| ras-related protein ypt3 (rab), putative [Cryptococcus neoformans
var. neoformans JEC21]
Length = 205
Score = 210 bits (535), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 104/181 (57%), Positives = 137/181 (75%), Gaps = 3/181 (1%)
Query: 43 QILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTAGQERYRAVTSAYYRGAL 102
+LSRFT+NEF +SKSTIGVEF TR++ ++GK +KAQIWDTAGQERYRA+TSAYYRGA+
Sbjct: 17 NLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTVKAQIWDTAGQERYRAITSAYYRGAV 76
Query: 103 GAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDLVDMRAVSAEDAVEFAED 162
GA++VYDI K Q++++V RW++ELR HAD++I I+L+GNKSDL +RAVS ++A +FA +
Sbjct: 77 GALLVYDIAKHQTYENVTRWLKELRDHADANIVIMLVGNKSDLKHLRAVSTDEAKQFATE 136
Query: 163 QGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNGKVDGPPMLAGSKIDVISGA 222
GL F E SAL+ NV++AF +L +IY VS K LE +G V P G I V A
Sbjct: 137 NGLSFIETSALDASNVESAFQNILTDIYRIVSSKSLE-SSGDVIKPS--GGETILVAPTA 193
Query: 223 D 223
D
Sbjct: 194 D 194
>gi|56758178|gb|AAW27229.1| SJCHGC05511 protein [Schistosoma japonicum]
gi|226466852|emb|CAX69561.1| Ras-related protein Rab-11A [Schistosoma japonicum]
Length = 213
Score = 210 bits (534), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 99/173 (57%), Positives = 132/173 (76%)
Query: 24 KIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWD 83
++ +FK+V+IGDS VGK+ + SRFT EF +SKSTIGV+F T+ V I+GK++KAQIWD
Sbjct: 7 QLGLLFKIVLIGDSGVGKTNLRSRFTNQEFNLESKSTIGVDFATKNVVIDGKVVKAQIWD 66
Query: 84 TAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKS 143
TAGQERYRA+TSAYYRGA+GA++VYDI+K +F ++ RW++ELR +A + I+L+GNK
Sbjct: 67 TAGQERYRAITSAYYRGAVGALLVYDISKPDTFLNLDRWLDELREYASDDVVIMLVGNKC 126
Query: 144 DLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKK 196
DL +R V EDA FAE QG+ F E SALN NV+ AF + L+ IY VSK+
Sbjct: 127 DLKHLRCVLTEDAKLFAEQQGMSFMETSALNAFNVEEAFCQTLKTIYNVVSKR 179
>gi|417397205|gb|JAA45636.1| Putative rab subfamily protein of small gtpase [Desmodus rotundus]
Length = 212
Score = 210 bits (534), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 99/178 (55%), Positives = 136/178 (76%)
Query: 19 NMIPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIK 78
N + ++VFKVV+IG+S VGK+ +LSRFT+NEF DS++TIGVEF TRTV + +K
Sbjct: 3 NGTEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVK 62
Query: 79 AQIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIIL 138
AQIWDTAG ERYRA+TSAYYRGA+GA++V+D+TK Q++ V RW++EL HA+++I ++L
Sbjct: 63 AQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVML 122
Query: 139 IGNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKK 196
+GNKSDL R V ++A FAE+ GL F E SAL+ NV+ AF +L+EI+ VSK+
Sbjct: 123 VGNKSDLSQAREVPTDEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQ 180
>gi|223941192|dbj|BAH23088.1| small GTP binding protein Rab11 [Babesia bigemina]
Length = 211
Score = 209 bits (533), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 103/172 (59%), Positives = 128/172 (74%), Gaps = 2/172 (1%)
Query: 20 MIPDK-IDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTIN-GKII 77
M+ D+ DY+FK+V+IGDS VGKS +L RF K F DSKSTIGVEF T+ VT+N GKI
Sbjct: 1 MVADQNYDYLFKIVLIGDSNVGKSNLLDRFVKGNFKLDSKSTIGVEFATKNVTLNNGKIA 60
Query: 78 KAQIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRII 137
KAQIWDTAGQERYRA+TSAYYRGA+GA++VYDI + SF V++W+ EL +AD++I I
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAMGAIIVYDIACKASFSSVSKWLTELHDYADANITIC 120
Query: 138 LIGNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEI 189
L+GNKSDL +R V+ ED FA + L F E S LN +NVD AF LL +I
Sbjct: 121 LVGNKSDLTHLREVAKEDGEAFANENDLIFFETSCLNSENVDVAFKELLSKI 172
>gi|167376392|ref|XP_001733978.1| rab11 [Entamoeba dispar SAW760]
gi|165904707|gb|EDR29887.1| rab11, putative [Entamoeba dispar SAW760]
Length = 231
Score = 209 bits (533), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 101/190 (53%), Positives = 134/190 (70%)
Query: 20 MIPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKA 79
M + D+++K+V+IG+S VGKS +L RFT+NEF + +STIGVEF TR++ GK+I+A
Sbjct: 25 MTQEDYDFLYKIVLIGESGVGKSNLLLRFTRNEFDAEKRSTIGVEFATRSIQHEGKVIRA 84
Query: 80 QIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILI 139
QIWDTAGQERYRA+T+AYYRGA+GA+VVYDITK +F + RW+ EL+ +AD I I++I
Sbjct: 85 QIWDTAGQERYRAITNAYYRGAVGALVVYDITKENTFKSIERWLSELKDNADPKIVIMII 144
Query: 140 GNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELE 199
GNK+DL R + A EF + Q LFF E SAL+G NV+TAF LL EI+ + E
Sbjct: 145 GNKADLAQTREIEEATAKEFCQKQNLFFFETSALDGTNVETAFKSLLVEIFKQNASTVEE 204
Query: 200 CGNGKVDGPP 209
N K P
Sbjct: 205 TSNDKPAEKP 214
>gi|50980848|gb|AAT91270.1| putative Rab GTPase [Paxillus involutus]
gi|50980850|gb|AAT91271.1| GTPase [Paxillus involutus]
gi|50980852|gb|AAT91272.1| GTPase [Paxillus involutus]
Length = 161
Score = 209 bits (533), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 98/160 (61%), Positives = 129/160 (80%)
Query: 31 VVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTAGQERY 90
VV+IGDS VGKS +LSRFT+NEF DSKSTIGVEF TR++ ++ K +KAQIWDTAGQERY
Sbjct: 1 VVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSINVDSKTVKAQIWDTAGQERY 60
Query: 91 RAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDLVDMRA 150
RA+TSAYYRGA+GA++VYDI+K ++ +V RW++ELR HADS+I I+L+GNKSDL +RA
Sbjct: 61 RAITSAYYRGAVGALLVYDISKHATYVNVTRWLKELRDHADSNIVIMLVGNKSDLKHLRA 120
Query: 151 VSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIY 190
V E+A F+ + L F E SAL+ NV++AF +L ++Y
Sbjct: 121 VPTEEAKNFSAENELSFIETSALDASNVESAFQTILTDVY 160
>gi|407043687|gb|EKE42089.1| Rab family GTPase [Entamoeba nuttalli P19]
Length = 207
Score = 209 bits (533), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 102/190 (53%), Positives = 134/190 (70%)
Query: 20 MIPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKA 79
M + D+++K+V+IG+S VGKS +L RFT+NEF + +STIGVEF TR++ GK+I+A
Sbjct: 1 MTQEDYDFLYKIVLIGESGVGKSNLLLRFTRNEFDAEKRSTIGVEFATRSIQHEGKVIRA 60
Query: 80 QIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILI 139
QIWDTAGQERYRA+T+AYYRGA+GA+VVYDITK +F + RW+ EL+ +AD I I++I
Sbjct: 61 QIWDTAGQERYRAITNAYYRGAVGALVVYDITKENTFKSIERWLSELKDNADPKIVIMII 120
Query: 140 GNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELE 199
GNK+DL R V A EF + Q LFF E SAL+G NV+TAF LL EI+ + E
Sbjct: 121 GNKADLAQTREVEEATAKEFCQKQNLFFFETSALDGTNVETAFKSLLVEIFKQNASAVEE 180
Query: 200 CGNGKVDGPP 209
N K P
Sbjct: 181 SSNDKPTEKP 190
>gi|194036023|ref|XP_001928392.1| PREDICTED: ras-related protein Rab-25 [Sus scrofa]
Length = 213
Score = 209 bits (533), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 99/178 (55%), Positives = 136/178 (76%)
Query: 19 NMIPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIK 78
N + ++VFKVV+IG+S VGK+ +LSRFT+NEF DS++TIGVEF TRTV + +K
Sbjct: 3 NRSEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVK 62
Query: 79 AQIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIIL 138
AQIWDTAG ERYRA+TSAYYRGA+GA++V+D+TK Q++ V RW++EL HA+++I ++L
Sbjct: 63 AQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVML 122
Query: 139 IGNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKK 196
+GNKSDL R V ++A FAE+ GL F E SAL+ NV+ AF +L+EI+ VSK+
Sbjct: 123 VGNKSDLSQAREVPTDEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQ 180
>gi|403221558|dbj|BAM39691.1| small GTPase [Theileria orientalis strain Shintoku]
Length = 212
Score = 209 bits (532), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 101/165 (61%), Positives = 122/165 (73%), Gaps = 1/165 (0%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTI-NGKIIKAQIWDT 84
DY+FK+V+IGDS VGKS +L RF K F DSKSTIGVEF T+ VT+ NGK KAQIWDT
Sbjct: 8 DYLFKIVLIGDSNVGKSNLLDRFVKGNFKLDSKSTIGVEFATKNVTLKNGKTAKAQIWDT 67
Query: 85 AGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSD 144
AGQERYRA+TSAYYRGA GA+VVYDI +QSF +V+RW+ EL + D ++ I L+GNKSD
Sbjct: 68 AGQERYRAITSAYYRGARGAIVVYDIASKQSFYNVSRWLTELNEYGDPNMIIALVGNKSD 127
Query: 145 LVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEI 189
L +R VS+ED +A L F E S LN +N+DTAF LL I
Sbjct: 128 LTHLREVSSEDGERYAHSNNLMFFETSCLNNENIDTAFTELLSSI 172
>gi|344286892|ref|XP_003415190.1| PREDICTED: ras-related protein Rab-25-like [Loxodonta africana]
Length = 213
Score = 209 bits (532), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 99/178 (55%), Positives = 136/178 (76%)
Query: 19 NMIPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIK 78
N + ++VFKVV+IG+S VGK+ +LSRFT+NEF DS++TIGVEF TRTV + +K
Sbjct: 3 NRKEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFNHDSRTTIGVEFSTRTVMLGTAAVK 62
Query: 79 AQIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIIL 138
AQIWDTAG ERYRA+TSAYYRGA+GA++V+D+TK Q++ V RW++EL HA+++I ++L
Sbjct: 63 AQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVML 122
Query: 139 IGNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKK 196
+GNKSDL R V ++A FAE+ GL F E SAL+ NV+ AF +L+EI+ VSK+
Sbjct: 123 VGNKSDLSQAREVPTDEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQ 180
>gi|67970463|dbj|BAE01574.1| unnamed protein product [Macaca fascicularis]
Length = 461
Score = 209 bits (532), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 95/145 (65%), Positives = 121/145 (83%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIW
Sbjct: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI K ++++V RW++ELR HADS+I I+L+GNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNK 125
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFF 167
SDL +RAV ++A FAE L F
Sbjct: 126 SDLRHLRAVPTDEARAFAEKNNLSF 150
>gi|67462573|ref|XP_647948.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|50978618|dbj|BAD34976.1| EhRab11A protein [Entamoeba histolytica]
gi|56463710|gb|EAL42562.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|449707698|gb|EMD47312.1| Rab family gtpase [Entamoeba histolytica KU27]
Length = 207
Score = 209 bits (532), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 102/190 (53%), Positives = 134/190 (70%)
Query: 20 MIPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKA 79
M + D+++K+V+IG+S VGKS +L RFT+NEF + +STIGVEF TR++ GK+I+A
Sbjct: 1 MTQEDYDFLYKIVLIGESGVGKSNLLLRFTRNEFDAEKRSTIGVEFATRSIQHEGKVIRA 60
Query: 80 QIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILI 139
QIWDTAGQERYRA+T+AYYRGA+GA+VVYDITK +F + RW+ EL+ +AD I I++I
Sbjct: 61 QIWDTAGQERYRAITNAYYRGAVGALVVYDITKENTFKSIERWLSELKDNADPKIVIMII 120
Query: 140 GNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELE 199
GNK+DL R V A EF + Q LFF E SAL+G NV+TAF LL EI+ + E
Sbjct: 121 GNKADLAQTREVEEATAKEFCQKQNLFFFETSALDGTNVETAFKSLLVEIFKQNASAVEE 180
Query: 200 CGNGKVDGPP 209
N K P
Sbjct: 181 SSNDKPAEKP 190
>gi|340500435|gb|EGR27312.1| ras oncogene family protein, putative [Ichthyophthirius
multifiliis]
Length = 246
Score = 209 bits (532), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 93/161 (57%), Positives = 130/161 (80%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
D++FK+V+IGDS VGKS +LSRFTK++FF D K+TIGVEF TR++ + K+IKAQIWDTA
Sbjct: 11 DFIFKIVLIGDSNVGKSNLLSRFTKDQFFQDQKTTIGVEFATRSIITDNKLIKAQIWDTA 70
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQERY+++T+AYYRGA+GA+++YDITK SF ++ +W+ E+R HA+ I I+L+GNKSDL
Sbjct: 71 GQERYKSITTAYYRGAVGALLIYDITKYLSFTNIQKWLNEIRDHAEPHIVIMLVGNKSDL 130
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLL 186
+R V E+A FAE+ + F EASAL+ NV+ +F+RL+
Sbjct: 131 KHLRQVKQEEATLFAENNNIAFIEASALDSSNVELSFYRLI 171
>gi|145485861|ref|XP_001428938.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834601|emb|CAI44716.1| rab_A25 [Paramecium tetraurelia]
gi|124396027|emb|CAK61540.1| unnamed protein product [Paramecium tetraurelia]
Length = 209
Score = 209 bits (531), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 98/160 (61%), Positives = 128/160 (80%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D DY+FK+V+ GDS VGKS +L RFTKN+F DSK+TIGVEF TR++TI+GK++KAQIW
Sbjct: 6 DDYDYLFKIVLSGDSGVGKSNLLLRFTKNQFNADSKTTIGVEFATRSITISGKVVKAQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+T+AYYRGA+GAV+VYDIT +QSF+ V +W++E+R +AD I I++IGNK
Sbjct: 66 DTAGQERYRAITAAYYRGAIGAVLVYDITNKQSFEAVEQWIQEVRENADKDIVIMIIGNK 125
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAF 182
SDL +RA+ E + A+ + F EASA +G NVD AF
Sbjct: 126 SDLKHLRAIRTESGQDLAQMYKVAFMEASAQDGTNVDQAF 165
>gi|1405561|emb|CAA67153.1| FSGTP1 [Fagus sylvatica]
Length = 215
Score = 209 bits (531), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 107/178 (60%), Positives = 134/178 (75%), Gaps = 4/178 (2%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
++ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TRT+ + G+ +KAQIW
Sbjct: 7 EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQIW 66
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYD+TK +F+ V W++ELR HADS+I I+LIGNK
Sbjct: 67 DTAGQERYRAITSAYYRGAVGALLVYDVTKPTTFEQV--WLKELRDHADSNIVIMLIGNK 124
Query: 143 SDLVDMRAVSAEDAVEFA-EDQGLFFSEASALNGDNVDTAFFRLL-QEIYGAVSKKEL 198
+DL RAV EDA F + L F E SAL NV+ AF +L G +SKK L
Sbjct: 125 TDLKHSRAVRTEDAQGFMLRKKALSFIETSALKATNVEKAFQTILCLRFTGIISKKSL 182
>gi|126307642|ref|XP_001367187.1| PREDICTED: ras-related protein Rab-25-like [Monodelphis domestica]
Length = 213
Score = 209 bits (531), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 99/178 (55%), Positives = 136/178 (76%)
Query: 19 NMIPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIK 78
N + ++VFKVV+IG+S VGK+ +LSRFT+NEF DS++TIGVEF TRTV + +K
Sbjct: 3 NGTEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVLLGTAAVK 62
Query: 79 AQIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIIL 138
AQIWDTAG ERYRA+TSAYYRGA+GA++V+D+TK Q++ V RW++EL HA+++I ++L
Sbjct: 63 AQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVML 122
Query: 139 IGNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKK 196
+GNKSDL R V ++A FAE+ GL F E SAL+ NV+ AF +L+EI+ VSK+
Sbjct: 123 VGNKSDLSQAREVPTDEARMFAENNGLLFIETSALDSTNVELAFETVLKEIFTKVSKQ 180
>gi|440301486|gb|ELP93872.1| rab11, putative [Entamoeba invadens IP1]
Length = 213
Score = 208 bits (530), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 99/177 (55%), Positives = 133/177 (75%)
Query: 19 NMIPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIK 78
N D+ D+++K+V++G+S VGKS +L RFT+NEF D +STIGVEF TR++ + K I+
Sbjct: 3 NTGEDEYDFLYKIVLVGESGVGKSNLLLRFTRNEFDPDKRSTIGVEFATRSIVYHEKNIR 62
Query: 79 AQIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIIL 138
AQIWDTAGQERYRA+T+AYYRGALGA+VVYDITK+ SF+ V RW+ EL +AD + ++
Sbjct: 63 AQIWDTAGQERYRAITNAYYRGALGALVVYDITKKSSFESVERWLNELHENADRKVLQMI 122
Query: 139 IGNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSK 195
IGNKSDL R V+ E+ + AED FF E SAL+G+NV+ AF LL++IY +K
Sbjct: 123 IGNKSDLNQTREVTTEEGKKLAEDNKAFFFETSALDGNNVEDAFMTLLKKIYDESAK 179
>gi|395532154|ref|XP_003768136.1| PREDICTED: ras-related protein Rab-25 [Sarcophilus harrisii]
Length = 213
Score = 208 bits (530), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 99/178 (55%), Positives = 136/178 (76%)
Query: 19 NMIPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIK 78
N + ++VFKVV+IG+S VGK+ +LSRFT+NEF DS++TIGVEF TRTV + +K
Sbjct: 3 NGAEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVLLGTAAVK 62
Query: 79 AQIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIIL 138
AQIWDTAG ERYRA+TSAYYRGA+GA++V+D+TK Q++ V RW++EL HA+++I ++L
Sbjct: 63 AQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVML 122
Query: 139 IGNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKK 196
+GNKSDL R V ++A FAE+ GL F E SAL+ NV+ AF +L+EI+ VSK+
Sbjct: 123 VGNKSDLSHAREVPTDEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFTKVSKQ 180
>gi|117939039|dbj|BAF36673.1| Small G Protein RAB [Pyrsonympha grandis]
Length = 200
Score = 208 bits (530), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 99/165 (60%), Positives = 129/165 (78%)
Query: 31 VVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTAGQERY 90
+V+IGDS VGKS +L R+TKNEF +SKSTIGVEF TR++ + K IKAQIWDTAGQ+RY
Sbjct: 1 IVLIGDSGVGKSNLLLRYTKNEFNLESKSTIGVEFATRSIQFDNKTIKAQIWDTAGQDRY 60
Query: 91 RAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDLVDMRA 150
RA+TSAYYRGA+GA++VYDI+K ++++V +W++ELR HAD SI I+L+GNKSDL +R
Sbjct: 61 RAITSAYYRGAVGALLVYDISKHATYENVDKWLKELRDHADPSIVIMLVGNKSDLRHLRN 120
Query: 151 VSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSK 195
V E+A FA+ L F E SAL+ NV+TAF +LQEIY V +
Sbjct: 121 VPTEEAKNFAQRNNLSFIETSALHSTNVETAFHTILQEIYKNVVR 165
>gi|403370433|gb|EJY85078.1| Rab-type small GTPase [Oxytricha trifallax]
Length = 254
Score = 208 bits (530), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 98/170 (57%), Positives = 133/170 (78%), Gaps = 1/170 (0%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTV-TINGKIIKAQIWDT 84
DY+FKVV+IGDS VGKS +L R+TK +F +SK+TIGVEF T+++ T + K++KAQIWDT
Sbjct: 11 DYLFKVVMIGDSGVGKSNLLMRYTKGDFNIESKTTIGVEFATKSIKTQDKKVVKAQIWDT 70
Query: 85 AGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSD 144
AGQERYRA+T+AYYRGA+GA++VYD+T SF HV+ W++EL+ +ADS+I I+L+GNK+D
Sbjct: 71 AGQERYRAITNAYYRGAVGALLVYDVTCMDSFQHVSNWLKELKQYADSNIVILLVGNKTD 130
Query: 145 LVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVS 194
L D R V E+A +A+ L F E SAL+ NVD AF R++ EIY +S
Sbjct: 131 LKDKREVRKEEAAAYADQHSLAFIETSALDCSNVDLAFDRIINEIYKVIS 180
>gi|342885037|gb|EGU85147.1| hypothetical protein FOXB_04325 [Fusarium oxysporum Fo5176]
Length = 197
Score = 208 bits (529), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 103/182 (56%), Positives = 135/182 (74%), Gaps = 2/182 (1%)
Query: 42 SQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTAGQERYRAVTSAYYRGA 101
S +LSRFT+NEF DSKSTIGVEF TR++ ++ K IKAQIWDTAGQERYRA+TSAYYRGA
Sbjct: 8 SNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDTAGQERYRAITSAYYRGA 67
Query: 102 LGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDLVDMRAVSAEDAVEFAE 161
+GA++VYDI+K Q++++V RW++ELR HAD++I I+L+GNKSDL +RAV E+A FA
Sbjct: 68 VGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVGNKSDLRHLRAVPTEEAKSFAS 127
Query: 162 DQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNGKVDGPPMLAGSKIDVISG 221
+ L F E SAL+ NV+ AF +L EIY VS K L+ G+ + AG+ I +
Sbjct: 128 ENHLSFIETSALDASNVELAFQNILTEIYRIVSSKALDSGDSA--QATIGAGTNISLSKP 185
Query: 222 AD 223
AD
Sbjct: 186 AD 187
>gi|268561566|ref|XP_002638358.1| Hypothetical protein CBG18559 [Caenorhabditis briggsae]
Length = 214
Score = 208 bits (529), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 100/175 (57%), Positives = 133/175 (76%), Gaps = 1/175 (0%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
++ DY+FKVV++GDS VGKS +LSRFT+N F ++KSTIGVEF TR++ I GK IKA IW
Sbjct: 7 EEYDYLFKVVLVGDSGVGKSNLLSRFTRNTFDLETKSTIGVEFATRSMMIEGKKIKATIW 66
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHAD-SSIRIILIGN 141
DTAGQERYRA+T AYYRGALG ++VYDI K Q+F ++ +W++ELR HAD S+I I+L+GN
Sbjct: 67 DTAGQERYRAITPAYYRGALGILIVYDIAKHQTFQNIDQWLKELRNHADESNISIMLVGN 126
Query: 142 KSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKK 196
K+DL +RAV ++A +A+ + F E SAL+ NV+ A LL +IY VS K
Sbjct: 127 KTDLRHLRAVPTQEAAIYADRNHMSFIETSALDSTNVEEALRNLLTDIYKTVSTK 181
>gi|403293753|ref|XP_003937876.1| PREDICTED: ras-related protein Rab-25 [Saimiri boliviensis
boliviensis]
Length = 213
Score = 208 bits (529), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 98/171 (57%), Positives = 133/171 (77%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
++VFKVV+IG+S VGK+ +LSRFT+NEF DS++TIGVEF TRTV + +KAQIWDTA
Sbjct: 10 NFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTA 69
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
G ERYRA+TSAYYRGA+GA++V+D+TK ++ V RW++EL HA+++I ++L+GNKSDL
Sbjct: 70 GLERYRAITSAYYRGAVGALLVFDLTKHHTYAVVERWLKELYDHAEATIVVMLVGNKSDL 129
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKK 196
R V E+A FAE+ GL F E SAL+ NV+ AF +L+EI+ VSK+
Sbjct: 130 SQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFEKVSKQ 180
>gi|417408504|gb|JAA50801.1| Putative rab subfamily protein of small gtpase, partial [Desmodus
rotundus]
Length = 190
Score = 208 bits (529), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 99/156 (63%), Positives = 126/156 (80%)
Query: 31 VVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTAGQERY 90
VV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIWDTAGQERY
Sbjct: 1 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERY 60
Query: 91 RAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDLVDMRA 150
RA+TSAYYRGA+GA++VYDI K ++++V RW++ELR HADS+I I+L+GNKSDL +RA
Sbjct: 61 RAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRA 120
Query: 151 VSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLL 186
V ++A FAE L F E SAL+ NV+ AF +L
Sbjct: 121 VPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNIL 156
>gi|117655459|gb|ABK55619.1| RAB 11-a [Euplotes octocarinatus]
Length = 231
Score = 208 bits (529), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 101/174 (58%), Positives = 133/174 (76%)
Query: 22 PDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQI 81
D+ DY+ KVV+IGDS VGKS +LSRF KNEF +SK+TIGVEF T+T+ KIIKAQI
Sbjct: 6 EDEYDYLLKVVLIGDSGVGKSNLLSRFAKNEFNLESKTTIGVEFVTKTIECGSKIIKAQI 65
Query: 82 WDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGN 141
WDTAGQERYRA+TSAYYRGA+ A +VYDITK +F +V +W++EL+ +ADS+I ++L+GN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVAAFLVYDITKLHTFQNVEKWLQELKDYADSNIVVMLVGN 125
Query: 142 KSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSK 195
K+DL ++RAV EDA +AE L F E SAL+ NV AF +++Q + + SK
Sbjct: 126 KTDLNNLRAVKVEDAQIYAEKNELAFIETSALDSTNVVEAFEQIIQIYHNSESK 179
>gi|2623643|gb|AAB86480.1| GTP-binding protein [Entamoeba histolytica]
Length = 206
Score = 207 bits (527), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 101/184 (54%), Positives = 132/184 (71%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
D+++K+V+IG+S VGKS +L RFT+NEF + +STIGVEF TR++ GK+I+AQIWDTA
Sbjct: 6 DFLYKIVLIGESGVGKSNLLLRFTRNEFDAEKRSTIGVEFATRSIQHEGKVIRAQIWDTA 65
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQERYRA+T+AYYRGA+GA+VVYDITK +F + RW+ EL+ +AD I I++IGNK+DL
Sbjct: 66 GQERYRAITNAYYRGAVGALVVYDITKENTFKSIERWLSELKDNADPKIVIMIIGNKADL 125
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNGKV 205
R V A EF + Q LFF E SAL+G NV+TAF LL EI+ + E N K
Sbjct: 126 AQTREVEEATAKEFCQKQNLFFFETSALDGTNVETAFKSLLVEIFKQNASAVEESSNDKP 185
Query: 206 DGPP 209
P
Sbjct: 186 AEKP 189
>gi|291411545|ref|XP_002722062.1| PREDICTED: RAB11B, member RAS oncogene family-like [Oryctolagus
cuniculus]
Length = 234
Score = 207 bits (527), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 99/156 (63%), Positives = 126/156 (80%)
Query: 31 VVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTAGQERY 90
VV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIWDTAGQERY
Sbjct: 57 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERY 116
Query: 91 RAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDLVDMRA 150
RA+TSAYYRGA+GA++VYDI K ++++V RW++ELR HADS+I I+L+GNKSDL +RA
Sbjct: 117 RAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRA 176
Query: 151 VSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLL 186
V ++A FAE L F E SAL+ NV+ AF +L
Sbjct: 177 VPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNIL 212
>gi|403345507|gb|EJY72124.1| hypothetical protein OXYTRI_06879 [Oxytricha trifallax]
Length = 266
Score = 207 bits (527), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 92/169 (54%), Positives = 132/169 (78%)
Query: 22 PDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQI 81
D D++FK+V+IGDS VGKS +L R+TKN+F +S+STIGVEF TR++ + + ++AQI
Sbjct: 8 QDHYDHLFKIVLIGDSGVGKSNLLLRYTKNQFKINSQSTIGVEFATRSIQVEDQFVRAQI 67
Query: 82 WDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGN 141
WDTAGQERYRA+T+AYYR A+GA++VYDITK ++ ++ RW+ ELR HA+ SI ++L+GN
Sbjct: 68 WDTAGQERYRAITNAYYRNAVGALLVYDITKYNTYQNIERWITELREHAEYSISVLLVGN 127
Query: 142 KSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIY 190
KSDL RAVS E+A +A++ + F E SAL+ NV+ AF +++Q+IY
Sbjct: 128 KSDLKSQRAVSFEEANAYAKNNNIHFIETSALDATNVEIAFVKVIQDIY 176
>gi|281212546|gb|EFA86706.1| Rab GTPase [Polysphondylium pallidum PN500]
Length = 223
Score = 207 bits (526), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 98/172 (56%), Positives = 129/172 (75%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
DY+FK+V+IGDSAVGKS +L+RFT+NEF +K+TIGV+F T+++ I K+I AQ WDTA
Sbjct: 8 DYLFKIVIIGDSAVGKSNLLNRFTRNEFTEKTKATIGVDFGTKSIEIENKVITAQCWDTA 67
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQER+RAVTS YYRGA+GA++VYDIT + SF +V RW+ ELR AD I I+++GNKSDL
Sbjct: 68 GQERFRAVTSGYYRGAVGAMIVYDITSKVSFKNVTRWLNELREMADPDILIMMVGNKSDL 127
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKE 197
R VS ++A FA+ + F E SALN NV+ AF RLL +IY +K+
Sbjct: 128 DSAREVSTQEAQSFAQSHKISFLETSALNSSNVNLAFERLLTDIYHHFGQKK 179
>gi|403339931|gb|EJY69227.1| Rab11A, RAB family GTPase [Oxytricha trifallax]
Length = 231
Score = 207 bits (526), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 101/185 (54%), Positives = 139/185 (75%), Gaps = 7/185 (3%)
Query: 13 RHQQQENMIPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTI 72
+H+Q+E D++FK+V+IGDS VGKS +LSRFTKNEF +SK+TIGVEF T++ ++
Sbjct: 4 QHEQEE------YDFLFKIVLIGDSGVGKSNLLSRFTKNEFNLESKATIGVEFATKSFSL 57
Query: 73 -NGKIIKAQIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHAD 131
NG+ +K QIWDTAGQERYRA+T+ YYRGA+GA++VYDITK ++F+ V RW++EL +A+
Sbjct: 58 ENGQSVKVQIWDTAGQERYRAITNTYYRGAVGALLVYDITKMKTFESVDRWLQELHQYAE 117
Query: 132 SSIRIILIGNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYG 191
S I I+L+GNK+DL +R V E+A EFA + L F E SAL NVD AF L+Q+I+
Sbjct: 118 SGIVILLVGNKTDLHKLREVKREEAAEFASLKNLAFIETSALVSSNVDEAFDLLIQQIHK 177
Query: 192 AVSKK 196
S +
Sbjct: 178 EASSR 182
>gi|297839229|ref|XP_002887496.1| hypothetical protein ARALYDRAFT_476500 [Arabidopsis lyrata subsp.
lyrata]
gi|297333337|gb|EFH63755.1| hypothetical protein ARALYDRAFT_476500 [Arabidopsis lyrata subsp.
lyrata]
Length = 232
Score = 206 bits (525), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 98/179 (54%), Positives = 133/179 (74%)
Query: 18 ENMIPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKII 77
E+ ++ DY+FK V+IGDSAVGKS +LSRF+K+EF FDSK TIGVEF R V + KII
Sbjct: 3 EDSYEEECDYLFKAVLIGDSAVGKSNLLSRFSKDEFRFDSKPTIGVEFAYRNVHVGDKII 62
Query: 78 KAQIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRII 137
KAQIWDTAGQER+RA+TS+YYRGALGA+++YDIT+R +FD++ +W+ ELR A+ ++
Sbjct: 63 KAQIWDTAGQERFRAITSSYYRGALGALLIYDITRRTTFDNIKKWLFELRDFANPETVVV 122
Query: 138 LIGNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKK 196
L+GNKSDL R V ++ AE +GLFF E SAL NV+ AF ++ I+ V+++
Sbjct: 123 LVGNKSDLRQSREVEEDEGKTLAESEGLFFLETSALENVNVEEAFLVMIGRIHEVVTQR 181
>gi|356512992|ref|XP_003525198.1| PREDICTED: ras-related protein RABA6a-like [Glycine max]
Length = 217
Score = 206 bits (525), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 106/215 (49%), Positives = 147/215 (68%), Gaps = 9/215 (4%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
++ DY+FK V+IGDS VGKS +LSRF K+EF DSK TIGVEF R + + K+IKAQIW
Sbjct: 7 EECDYLFKAVLIGDSGVGKSNMLSRFAKDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQIW 66
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQER+RA+TS+YYRGALGA++VYDI+ R S+++V++W+ ELR + ++L+GNK
Sbjct: 67 DTAGQERFRAITSSYYRGALGAMLVYDISMRSSYENVSKWLLELREFGGEDMVVVLVGNK 126
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
DL + R V E+ FAE +GL F E SAL NV+ F +++ IY S+K L
Sbjct: 127 CDLDESREVEKEEGKGFAETEGLCFMETSALKNLNVEEVFLQMITRIYDMTSQKNLA--- 183
Query: 203 GKVDGPP--MLAGSKIDVISGADLEISEMKKLSTC 235
K++ P +L G +I + AD E++ K+ STC
Sbjct: 184 AKMEEQPINLLNGKEIHI---AD-EVTATKQTSTC 214
>gi|403370738|gb|EJY85236.1| Rab11A, RAB family GTPase [Oxytricha trifallax]
Length = 249
Score = 206 bits (525), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 97/177 (54%), Positives = 137/177 (77%), Gaps = 1/177 (0%)
Query: 21 IPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTV-TINGKIIKA 79
+ D DY+FK+V++GDS VGKS +L R+TKNEF +S T+G+EF T+T+ T +II+A
Sbjct: 1 MDDNYDYLFKLVMLGDSGVGKSNLLMRYTKNEFNVNSTMTMGIEFATKTIQTAQNQIIRA 60
Query: 80 QIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILI 139
QIWDT GQERYR++TSAYYRGA+GA++VYD+T ++SFD+V W++ELR A+S+I ++L+
Sbjct: 61 QIWDTCGQERYRSLTSAYYRGAVGALMVYDVTSQKSFDNVQVWLKELRQFAESNIVVLLV 120
Query: 140 GNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKK 196
GNK DL D R V EDA +FA++QG+ F E SAL NVD AF R++ EI+ V+++
Sbjct: 121 GNKIDLKDKREVRKEDASQFAQEQGIAFIETSALECSNVDIAFERIIYEIHRVVAQQ 177
>gi|18266417|gb|AAL67568.1|AF461435_1 small GTP binding protein rab11 [Babesia gibsoni]
Length = 212
Score = 206 bits (524), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 103/172 (59%), Positives = 125/172 (72%), Gaps = 2/172 (1%)
Query: 20 MIPDK-IDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTIN-GKII 77
M+ D+ DY+FK+V+IGDS VGKS +L RF K F DSKSTIGVEF T+ V +N GKI
Sbjct: 1 MVADQNYDYLFKIVLIGDSNVGKSNLLDRFVKGNFKLDSKSTIGVEFATKNVVLNNGKIA 60
Query: 78 KAQIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRII 137
KAQIWDTAGQERYRA+TSAYYRGA+GA+VVYDI + SF V++W+ EL +AD +I I
Sbjct: 61 KAQIWDTAGQERYRAITSAYYRGAMGAIVVYDIACKSSFVSVSKWLTELHDYADGNITIC 120
Query: 138 LIGNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEI 189
L+GNKSDL +R V+ ED FA + L F E S LN +NVD AF LL I
Sbjct: 121 LVGNKSDLTHLREVAKEDGEAFANENDLIFFETSCLNSENVDVAFKELLSRI 172
>gi|15219515|ref|NP_177505.1| RAB GTPase A6a [Arabidopsis thaliana]
gi|75333591|sp|Q9C9U7.1|RAA6A_ARATH RecName: Full=Ras-related protein RABA6a; Short=AtRABA6a
gi|12324223|gb|AAG52089.1|AC012679_27 putative ras-related GTP-binding protein; 14977-15931 [Arabidopsis
thaliana]
gi|21537030|gb|AAM61371.1| putative ras-related GTP-binding protein [Arabidopsis thaliana]
gi|332197367|gb|AEE35488.1| RAB GTPase A6a [Arabidopsis thaliana]
Length = 233
Score = 206 bits (524), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 97/179 (54%), Positives = 133/179 (74%)
Query: 18 ENMIPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKII 77
E+ ++ DY+FK V+IGDSAVGKS +LSRF+K+EF FDSK TIGVEF R V + KII
Sbjct: 3 EDTYEEECDYLFKAVLIGDSAVGKSNLLSRFSKDEFRFDSKPTIGVEFAYRNVHVGDKII 62
Query: 78 KAQIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRII 137
KAQIWDTAGQER+RA+TS+YYRGALGA+++YDIT+R +FD++ +W+ ELR A+ ++
Sbjct: 63 KAQIWDTAGQERFRAITSSYYRGALGALLIYDITRRTTFDNIKKWLFELRDFANPETVVV 122
Query: 138 LIGNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKK 196
L+GNKSDL R V ++ AE +GL+F E SAL NV+ AF ++ I+ V+++
Sbjct: 123 LVGNKSDLRQSREVEEDEGKTLAESEGLYFLETSALENVNVEEAFLVMIGRIHEVVTQR 181
>gi|351705520|gb|EHB08439.1| Ras-related protein Rab-11A, partial [Heterocephalus glaber]
Length = 207
Score = 206 bits (524), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 98/172 (56%), Positives = 132/172 (76%)
Query: 27 YVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTAG 86
++FKVV+IG S G+S +LSRF +NEF DSKST G++F TR++ ++GK IKAQIWDTAG
Sbjct: 1 HLFKVVLIGHSGAGESNLLSRFIRNEFNLDSKSTSGIQFATRSIQVDGKTIKAQIWDTAG 60
Query: 87 QERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDLV 146
QER RA TSAYYR ALGA++V+DI K ++++V RW++E R HADS+I I+L+ NKSDL
Sbjct: 61 QERCRATTSAYYREALGALLVFDIAKHLTYENVERWLKEPRDHADSNIVIMLVRNKSDLC 120
Query: 147 DMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL 198
+RAV ++A FAE GL F E+SAL+ NV+ AF +L EIY VS+K++
Sbjct: 121 HLRAVPTDEARAFAEKNGLPFIESSALHWTNVEAAFQTILTEIYRTVSQKQI 172
>gi|148683326|gb|EDL15273.1| RAB25, member RAS oncogene family, isoform CRA_a [Mus musculus]
Length = 235
Score = 206 bits (523), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 97/170 (57%), Positives = 132/170 (77%)
Query: 28 VFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTAGQ 87
V +VV+IG+S VGK+ +LSRFT+NEF DS++TIGVEF TRTV + +KAQIWDTAG
Sbjct: 34 VGRVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTAGL 93
Query: 88 ERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDLVD 147
ERYRA+TSAYYRGA+GA++V+D+TK Q++ V RW++EL HA+++I ++L+GNKSDL
Sbjct: 94 ERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQ 153
Query: 148 MRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKE 197
R V E+A FAE+ GL F E SAL+ NV+ AF +L+EI+ VSK++
Sbjct: 154 AREVPTEEACMFAENNGLLFLETSALDSTNVELAFQTVLKEIFAKVSKQK 203
>gi|255583461|ref|XP_002532489.1| protein with unknown function [Ricinus communis]
gi|223527788|gb|EEF29888.1| protein with unknown function [Ricinus communis]
Length = 222
Score = 206 bits (523), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 96/177 (54%), Positives = 130/177 (73%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
++ DY+FK V+IGDSAVGKS +LSRF+++EF DSK TIGVEF R + + K+IKAQIW
Sbjct: 7 EECDYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTIGVEFAYRNIRVADKLIKAQIW 66
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQER+RA+TS+YYRGALGA++VYDIT+R +FD+V +W+ ELR + + + ++L GNK
Sbjct: 67 DTAGQERFRAITSSYYRGALGALLVYDITRRATFDNVKKWLTELREYGNPEMVVVLAGNK 126
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELE 199
DL R V E+ AE +GL F E SAL NV+ AF ++ +I+ S+K LE
Sbjct: 127 CDLSHTREVGEEEGKNLAETEGLCFMETSALENLNVEEAFLEMITKIHAITSQKSLE 183
>gi|123410263|ref|XP_001303658.1| guanine nucleotide regulatory protein [Trichomonas vaginalis G3]
gi|67944367|gb|AAY83819.1| small Rab GTPase Rab11b [Trichomonas vaginalis]
gi|72536126|gb|AAZ73171.1| small Rab GTPase Rab11 [Trichomonas vaginalis]
gi|121885054|gb|EAX90728.1| guanine nucleotide regulatory protein, putative [Trichomonas
vaginalis G3]
Length = 211
Score = 206 bits (523), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 94/173 (54%), Positives = 134/173 (77%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
DY+ K+V+IGDS VGK+ +L+RFT+++F +SKSTIGVEF ++T+ I GK IKAQIWDTA
Sbjct: 7 DYLLKIVLIGDSGVGKTNLLARFTRDQFNPESKSTIGVEFASKTMQIEGKTIKAQIWDTA 66
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQERYRA+TSAYYRGA+GA+++YDIT +F+ + +W++ELR +AD I ++L+GNK DL
Sbjct: 67 GQERYRAITSAYYRGAIGALLLYDITASLTFNSLEKWLKELRENADEKIIVMLVGNKCDL 126
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL 198
+ RAV++ +A+EFA+ Q L F E SA NV+ AF L+ EI ++K+ +
Sbjct: 127 SEQRAVTSANALEFAKAQNLLFIETSAREATNVNEAFQTLICEIVNKLNKQNV 179
>gi|358333720|dbj|GAA52200.1| Ras-related protein Rab-11B, partial [Clonorchis sinensis]
Length = 546
Score = 206 bits (523), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 98/165 (59%), Positives = 128/165 (77%)
Query: 32 VVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTAGQERYR 91
V+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR+V GK IKAQIWDTAGQERYR
Sbjct: 1 VLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSVQFGGKTIKAQIWDTAGQERYR 60
Query: 92 AVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDLVDMRAV 151
A+TSAYYRGA+GA++VYDI+K ++++V +W+ ELR H+D I ++LIGNK DL +R V
Sbjct: 61 AITSAYYRGAVGALLVYDISKHSTYENVTQWLHELRDHSDQDIVVMLIGNKCDLRHLRMV 120
Query: 152 SAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKK 196
++A EFA + LFF+E SAL+ NVD AF ++L++ V+ K
Sbjct: 121 PTDEAREFAMREKLFFTETSALDATNVDEAFVQVLKDAGHNVATK 165
>gi|410910942|ref|XP_003968949.1| PREDICTED: ras-related protein Rab-25-like [Takifugu rubripes]
Length = 210
Score = 206 bits (523), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 97/180 (53%), Positives = 135/180 (75%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
+ ++V+KVV+IG+S VGKS +LSRFTKNEF DS++TIGVEF TRTV ++ IKAQIW
Sbjct: 5 ESYNFVYKVVLIGESGVGKSNLLSRFTKNEFNHDSRTTIGVEFSTRTVQLDQYTIKAQIW 64
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAG ERYRA+TSAYYRGA+GA++VYDI+K +++ RW++EL HAD I ++L+GNK
Sbjct: 65 DTAGLERYRAITSAYYRGAVGALLVYDISKHLTYESTERWLKELYEHADPHIVVMLVGNK 124
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
DL +R V +E+A FAE++G+ F E SAL+ NV+ AF +L I V+ +++ G+
Sbjct: 125 RDLDTLRTVPSEEAQAFAENKGIMFMETSALDSTNVEAAFNEVLSAIQKKVASQQVTRGS 184
>gi|440292583|gb|ELP85770.1| rab11, putative [Entamoeba invadens IP1]
Length = 208
Score = 205 bits (522), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 97/171 (56%), Positives = 128/171 (74%)
Query: 20 MIPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKA 79
M + DY++K+V+IG+S VGKS +L RFT+NEF + +STIGVEF TR++ K+I+A
Sbjct: 1 MAQEDYDYLYKIVLIGESGVGKSNLLLRFTRNEFDPEKRSTIGVEFATRSIQHEQKVIRA 60
Query: 80 QIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILI 139
QIWDTAGQERYRA+T+AYYRGA+GA++VYDITK SF + RW+ EL+ +AD I ++++
Sbjct: 61 QIWDTAGQERYRAITNAYYRGAVGALIVYDITKESSFKSIERWLSELKDNADPKIVVMVV 120
Query: 140 GNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIY 190
GNK+DL R V A F E+Q LFF E SAL+G NV+TAF LL EIY
Sbjct: 121 GNKADLSQTREVDESTAKTFCENQKLFFFETSALDGTNVETAFKNLLIEIY 171
>gi|403357125|gb|EJY78180.1| Ras-related protein RABA2a [Oxytricha trifallax]
Length = 266
Score = 205 bits (522), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 104/184 (56%), Positives = 134/184 (72%), Gaps = 9/184 (4%)
Query: 8 DATDHRHQQQENMIPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQT 67
D T H QEN DY+FK+V+IGD+ VGKS +L R+TKN+F +S+STIGVEF T
Sbjct: 3 DETPH---DQENY-----DYLFKIVLIGDAGVGKSNLLLRYTKNQFKINSQSTIGVEFAT 54
Query: 68 RTVTINGKI-IKAQIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEEL 126
R + + +KAQIWDTAGQERYRA+T+AYYR A+GA++VYDI+K SF+++ +W++EL
Sbjct: 55 RNLKMGDDCYVKAQIWDTAGQERYRAITNAYYRNAVGALMVYDISKPNSFENIQKWMQEL 114
Query: 127 RAHADSSIRIILIGNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLL 186
R HADS+I I LIGNKSDL +RAV EDA + A+ + F E SALN NVD AF L+
Sbjct: 115 RDHADSNIAITLIGNKSDLKHLRAVKFEDAQKLAQTYQIPFIETSALNSMNVDAAFMNLI 174
Query: 187 QEIY 190
EIY
Sbjct: 175 NEIY 178
>gi|307777776|dbj|BAJ21284.1| Rab-family small GTPase Rab11C [Tetrahymena thermophila]
Length = 221
Score = 205 bits (522), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 95/177 (53%), Positives = 135/177 (76%)
Query: 17 QENMIPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKI 76
Q N D D++FK+V+IGDS VGKS ++SRFTK++F + + TIGVEF T+T+ I+ KI
Sbjct: 2 QRNQEEDVYDFLFKIVLIGDSGVGKSCLISRFTKDQFSMEQQPTIGVEFSTKTIKISDKI 61
Query: 77 IKAQIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRI 136
IKAQIWDTAGQERYRA+TSAYYRGA GA++V+DITK+ SF+++A+W +EL+ H+D I
Sbjct: 62 IKAQIWDTAGQERYRAITSAYYRGAAGALIVFDITKQTSFENLAKWYKELQEHSDVQIVT 121
Query: 137 ILIGNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAV 193
+LIGNK DL D R +S + A +FA++ + + E SAL+ NV+ AF ++++ IY +
Sbjct: 122 MLIGNKCDLADQRNISKDAASKFAQEYDMAYLETSALHSTNVEQAFHQIIKYIYDST 178
>gi|330792269|ref|XP_003284212.1| Rab GTPase [Dictyostelium purpureum]
gi|325085909|gb|EGC39308.1| Rab GTPase [Dictyostelium purpureum]
Length = 223
Score = 205 bits (521), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 99/178 (55%), Positives = 133/178 (74%)
Query: 20 MIPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKA 79
M ++ +Y+FK+V+IGDSAVGKS +L+RFT+NEF +K+TIGV+F T+++ I+ KII A
Sbjct: 1 MPEEESEYLFKIVIIGDSAVGKSNLLNRFTRNEFTEKTKATIGVDFGTKSIEIDNKIITA 60
Query: 80 QIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILI 139
Q WDTAGQER+RAVTS YYRGA+GA++VYDIT + SF +V RW+ ELR A+S I I+++
Sbjct: 61 QCWDTAGQERFRAVTSGYYRGAVGAMIVYDITSKISFKNVTRWLNELREMAESDILIMMV 120
Query: 140 GNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKE 197
GNKSDL R V ++A FAE + F E SALN NV+ AF LL +I+ VS K+
Sbjct: 121 GNKSDLEMSREVPTKEAKAFAESNKISFLETSALNSTNVNQAFETLLTDIFNLVSSKK 178
>gi|225678958|gb|EEH17242.1| GTP-binding protein yptV1 [Paracoccidioides brasiliensis Pb03]
Length = 222
Score = 205 bits (521), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 108/203 (53%), Positives = 137/203 (67%), Gaps = 14/203 (6%)
Query: 20 MIPDKIDYVFKVVV--------IGDSAVGKSQIL----SRFTKNEFFFDSKSTIGVEFQT 67
M D+ D++FK + S + SQI+ RFT+NEF DSKSTIGVEF T
Sbjct: 1 MANDEYDFLFKGISPAKFCEGSTAPSTIHTSQIILPMKYRFTRNEFNLDSKSTIGVEFAT 60
Query: 68 RTVTINGKIIKAQIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELR 127
R++ ++GK IKAQIWDTAGQERYRA+TSAYYRGA+GA++VYD TK+Q+F + RW++ELR
Sbjct: 61 RSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDTTKKQTFANCERWLKELR 120
Query: 128 AHADSSIRIILIGNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQ 187
HAD +I I+L+GNK D MR V DAVEFA++ L F E SAL+ NV+ AF +L
Sbjct: 121 EHADKNIVIMLVGNKIDEKHMRDVKTSDAVEFADEMKLSFIETSALDATNVELAFQNILT 180
Query: 188 EIYGAVSKKELECGNGKVDGPPM 210
EIY VS K LE NG P+
Sbjct: 181 EIYRIVSSKALE--NGSSSQSPL 201
>gi|412990280|emb|CCO19598.1| unknown [Bathycoccus prasinos]
Length = 212
Score = 204 bits (520), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 102/183 (55%), Positives = 132/183 (72%), Gaps = 15/183 (8%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D DY+FK+V+IGDS VGKS ILSRFT+NEF +SKSTIGVEF TR++ I K++KAQIW
Sbjct: 6 DDYDYLFKIVLIGDSGVGKSNILSRFTRNEFSVESKSTIGVEFATRSIEIEKKVVKAQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKR---------------QSFDHVARWVEELR 127
DTAGQERYRA+TSAYYRGA+GA++VYD+TK+ ++F V +W+ ELR
Sbjct: 66 DTAGQERYRAITSAYYRGAVGALLVYDVTKKGTAITKEIKLISYSLETFADVEKWLAELR 125
Query: 128 AHADSSIRIILIGNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQ 187
HADS I I+L GNK DL +R+V+ +DA +A + L F E SALN N+D AF ++L
Sbjct: 126 DHADSKIVIMLTGNKCDLQHLRSVTTQDAEIYAAKEDLLFLETSALNSVNIDAAFQKVLS 185
Query: 188 EIY 190
I+
Sbjct: 186 VIH 188
>gi|221505687|gb|EEE31332.1| Rab 11 protein, putative [Toxoplasma gondii VEG]
Length = 193
Score = 204 bits (520), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 100/166 (60%), Positives = 130/166 (78%), Gaps = 1/166 (0%)
Query: 44 ILSRFTKNEFFFDSKSTIGVEFQTRTVTIN-GKIIKAQIWDTAGQERYRAVTSAYYRGAL 102
+LSRFT++EF +SKSTIGVEF T++V ++ GK+IKAQIWDTAGQERYRA+TSAYYRGA+
Sbjct: 1 MLSRFTRDEFNLESKSTIGVEFATKSVYLDEGKVIKAQIWDTAGQERYRAITSAYYRGAV 60
Query: 103 GAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDLVDMRAVSAEDAVEFAED 162
GA++VYDITKRQSF++V RW++ELR HAD +I I+L+GNKSDL +RAVS E+A +FA
Sbjct: 61 GALLVYDITKRQSFENVERWLKELRDHADPNIVILLVGNKSDLKHLRAVSVEEATKFANR 120
Query: 163 QGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNGKVDGP 208
+ L F E SAL+ NV+ AF ++L EIY KK++E P
Sbjct: 121 EHLAFIETSALDATNVEQAFHQILAEIYLLRQKKQIEDNPQSTTQP 166
>gi|356520643|ref|XP_003528970.1| PREDICTED: ras-related protein RABA6b-like [Glycine max]
Length = 218
Score = 204 bits (519), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 101/206 (49%), Positives = 141/206 (68%), Gaps = 9/206 (4%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
++ DY+FK V+IGDS VGKS ++SRF K+EF DSK TIGVEF R + + K+IKAQIW
Sbjct: 9 EQCDYLFKAVLIGDSGVGKSNLISRFAKDEFRLDSKPTIGVEFAYRNIKVRDKLIKAQIW 68
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQER+RA+TS+YYRGALGA++VYDITKR +F +V +W+ ELR + ++L+GNK
Sbjct: 69 DTAGQERFRAITSSYYRGALGAMLVYDITKRATFVNVGKWLHELREFGGEDMVVVLVGNK 128
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
SDL R V E+ FAE + L F E SAL NVD AF ++ +I+ +S+K LE
Sbjct: 129 SDLDQSRQVEREEGKVFAETEELCFMETSALQNLNVDEAFLEMITKIHDIISQKSLE--- 185
Query: 203 GKVDGPPMLAGSKIDVISGADLEISE 228
+ G+ +++ SG ++ I++
Sbjct: 186 ------TKMNGTALNLPSGKEIHIAD 205
>gi|340504982|gb|EGR31367.1| hypothetical protein IMG5_111720 [Ichthyophthirius multifiliis]
Length = 175
Score = 204 bits (519), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 96/163 (58%), Positives = 129/163 (79%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
DY+FK+V+IGDS VGK+ ILSRFTK+EF +SK TIGVEF T+TV + K+IKAQIWDTA
Sbjct: 9 DYLFKIVIIGDSGVGKTNILSRFTKDEFSIESKPTIGVEFATKTVLNDNKLIKAQIWDTA 68
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQE+YRA+T+AYYRGA+GA+ ++DITK+ +FD++ +W+ EL+ +AD +I I+L+GNK DL
Sbjct: 69 GQEKYRAITNAYYRGAVGALTLFDITKQNTFDNLQKWLNELKENADPNIVIMLVGNKCDL 128
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQE 188
+ RAV EDA FAE L + E SAL+ NVD AF R+ ++
Sbjct: 129 NENRAVKTEDASAFAERNQLAYIETSALDSTNVDEAFQRVTRD 171
>gi|84997692|ref|XP_953567.1| small GTPase (Rab11 ) [Theileria annulata]
gi|65304564|emb|CAI72889.1| small GTPase (Rab11 homologue), putative [Theileria annulata]
Length = 207
Score = 204 bits (519), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 100/171 (58%), Positives = 121/171 (70%), Gaps = 1/171 (0%)
Query: 20 MIPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTI-NGKIIK 78
M DY+FK+V+IGDS VGKS +L RF K F DSKSTIGVEF T+ V + NGKI K
Sbjct: 1 MAEQTYDYLFKIVLIGDSNVGKSNLLDRFVKGNFKLDSKSTIGVEFATKNVNLKNGKIAK 60
Query: 79 AQIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIIL 138
AQIWDTAGQERYRA+TSAYYRGA GA+VVYDI +QSF +V+RW+ EL + D ++ I L
Sbjct: 61 AQIWDTAGQERYRAITSAYYRGARGAIVVYDIASKQSFYNVSRWLSELNEYGDPNMIIAL 120
Query: 139 IGNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEI 189
+GNKSDL +R V+ ED +A L F E S LN +N+DT F LL I
Sbjct: 121 VGNKSDLTHLREVTFEDGERYARSNNLLFFETSCLNNENIDTTFGELLNLI 171
>gi|256066492|ref|XP_002570538.1| rab11 [Schistosoma mansoni]
gi|350644474|emb|CCD60787.1| rab11, putative [Schistosoma mansoni]
Length = 213
Score = 204 bits (519), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 100/204 (49%), Positives = 142/204 (69%), Gaps = 12/204 (5%)
Query: 25 IDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDT 84
I +FK+V+IGDS VGK+ + SRFT +EF +SKSTIGV+F T+ V I+GK++KAQIWDT
Sbjct: 8 IGLLFKIVLIGDSGVGKTNLRSRFTNDEFNLESKSTIGVDFATKNVKIDGKVVKAQIWDT 67
Query: 85 AGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSD 144
AGQERYRA+TSAYYRGA+GA++VYDI+K +F ++ +W+EEL+ +A + I+LIGNK D
Sbjct: 68 AGQERYRAITSAYYRGAVGAILVYDISKPHTFLNLNKWLEELKEYASDDVIIMLIGNKCD 127
Query: 145 LVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNGK 204
L +R V EDA +A+ QG+ F E SAL+ NV+ AF + +++IY +SK
Sbjct: 128 LKHLRCVLTEDATRYAKQQGISFMETSALDSINVEEAFNQTIRDIYYLISKH-------- 179
Query: 205 VDGPPMLAGSKIDVISGADLEISE 228
P ++ ++I +L I E
Sbjct: 180 ----PSFNMNETNIIPTNNLPIQE 199
>gi|440903633|gb|ELR54270.1| Ras-related protein Rab-25, partial [Bos grunniens mutus]
Length = 199
Score = 204 bits (518), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 97/166 (58%), Positives = 129/166 (77%)
Query: 31 VVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTAGQERY 90
VV+IG+S VGK+ +LSRFT+NEF DS++TIGVEF TRTV + IKAQIWDTAG ERY
Sbjct: 1 VVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAIKAQIWDTAGLERY 60
Query: 91 RAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDLVDMRA 150
RA+TSAYYRGA+GA++V+D+TK Q++ V RW++EL HA+++I ++L+GNKSDL R
Sbjct: 61 RAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQSRE 120
Query: 151 VSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKK 196
V E+A FAE+ GL F E SAL+ NV+ AF +L+EI+ VSK+
Sbjct: 121 VPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQ 166
>gi|66818593|ref|XP_642956.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|74897296|sp|Q550H6.1|RB11C_DICDI RecName: Full=Ras-related protein Rab-11C
gi|60471082|gb|EAL69052.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 224
Score = 204 bits (518), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 97/175 (55%), Positives = 131/175 (74%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
++ +Y+FK+V+IGDSAVGKS +L+RFT+NEF +K+TIGV+F T+++ I+ K I AQ W
Sbjct: 5 EEAEYLFKIVIIGDSAVGKSNLLNRFTRNEFTEKTKATIGVDFGTKSIEIDNKTITAQCW 64
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQER+RAVTS YYRGA+GA++VYDIT + SF +V RW+ ELR A+ I I+++GNK
Sbjct: 65 DTAGQERFRAVTSGYYRGAVGAMIVYDITSKISFKNVTRWLNELREMAEQDILIMMVGNK 124
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKE 197
SDL R V ++A FAE + F E SALN NV+ +F RLL +IY VS K+
Sbjct: 125 SDLEMSREVPTKEAQAFAESNKISFLETSALNSTNVNQSFERLLTDIYHLVSSKK 179
>gi|403366976|gb|EJY83296.1| Ras-like protein Rab-11A [Oxytricha trifallax]
Length = 255
Score = 204 bits (518), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 90/165 (54%), Positives = 127/165 (76%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
DY+FK+V++GDS VGKS +L RF KNEF + ++TIGVEF T+++ I G+++KAQIWDTA
Sbjct: 11 DYLFKIVLVGDSGVGKSNLLMRFVKNEFHQNMQTTIGVEFSTKSMQIEGQLVKAQIWDTA 70
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQERYRA+T AYYR A+GA+++YDIT RQSF+++ +W EL H++++ +IL+GNK DL
Sbjct: 71 GQERYRALTHAYYRNAVGALLIYDITDRQSFENLKKWQSELANHSEANTVMILVGNKCDL 130
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIY 190
D RA+ E+A +FA+ + F E SALN NV+ AF L+ EI+
Sbjct: 131 SDQRAIKIEEAEKFAQSNNMAFIETSALNAKNVNIAFKNLITEIF 175
>gi|356524680|ref|XP_003530956.1| PREDICTED: ras-related protein RABA6a-like [Glycine max]
Length = 218
Score = 203 bits (517), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 107/216 (49%), Positives = 147/216 (68%), Gaps = 10/216 (4%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
++ DY+FK V+IGDS VGKS +LSRF K+EF DSK TIGVEF R + + K+IKAQIW
Sbjct: 7 EECDYLFKAVLIGDSGVGKSNLLSRFAKDEFRLDSKPTIGVEFAYRNIKVGDKLIKAQIW 66
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQER+RA+TS+YYRGALGA++VYDI++R S+++V++W+ ELR + ++L+GNK
Sbjct: 67 DTAGQERFRAITSSYYRGALGAMLVYDISRRSSYENVSKWLLELREFGGEDMVVVLVGNK 126
Query: 143 SDL-VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECG 201
DL R V E+ FAE +GL F E SAL NV+ F +++ IY S+K L
Sbjct: 127 CDLDGQSREVDKEEGKGFAETEGLCFMETSALKNLNVEEVFLQMITRIYDMTSQKNLA-- 184
Query: 202 NGKVDGPP--MLAGSKIDVISGADLEISEMKKLSTC 235
K+D P +L G +I + AD E++ K+ STC
Sbjct: 185 -AKMDEKPINLLNGKEIHI---AD-EVTATKQSSTC 215
>gi|149048127|gb|EDM00703.1| RAB25, member RAS oncogene family (predicted), isoform CRA_a
[Rattus norvegicus]
Length = 199
Score = 203 bits (517), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 95/166 (57%), Positives = 129/166 (77%)
Query: 31 VVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTAGQERY 90
+V+IG+S VGK+ +LSRFT+NEF DS++TIGVEF TRTV + +KAQIWDTAG ERY
Sbjct: 1 MVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTAGLERY 60
Query: 91 RAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDLVDMRA 150
RA+TSAYYRGA+GA++V+D+TK Q++ V RW++EL HA+++I ++L+GNKSDL R
Sbjct: 61 RAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQARE 120
Query: 151 VSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKK 196
V E+A FAE+ GL F E SAL+ NV+ AF +L+EI+ VSK+
Sbjct: 121 VPTEEACMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQ 166
>gi|326935770|ref|XP_003213940.1| PREDICTED: ras-related protein Rab-11A-like, partial [Meleagris
gallopavo]
Length = 252
Score = 203 bits (517), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 95/159 (59%), Positives = 125/159 (78%)
Query: 28 VFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTAGQ 87
+ VV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++ K +KAQIWDTAGQ
Sbjct: 17 LHPVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDNKTVKAQIWDTAGQ 76
Query: 88 ERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDLVD 147
ERYRA+TSAYYRGA+GA++VYDI K ++++ RW+ EL+ HAD++I I+L+GNKSDL
Sbjct: 77 ERYRAITSAYYRGAVGALLVYDIAKYLTYENAERWLTELQDHADANIIIMLVGNKSDLRH 136
Query: 148 MRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLL 186
+RAV ++A FAE GL F E SAL+ NV+ AF +L
Sbjct: 137 LRAVPTDEARSFAEKNGLSFLETSALDSTNVEMAFHNIL 175
>gi|432915693|ref|XP_004079205.1| PREDICTED: ras-related protein Rab-11B-like [Oryzias latipes]
Length = 218
Score = 203 bits (516), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 104/203 (51%), Positives = 141/203 (69%), Gaps = 10/203 (4%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ D++FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIW
Sbjct: 6 DEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI K ++++V RW++ELR HAD++I I+L+GNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNK 125
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL---- 198
SDL +RAV ++A FA + ++ + + F EIY VS+K++
Sbjct: 126 SDLRHLRAVPTDEARAFAGNNHPKKTKTPYVQAFGISALFSFSYTEIYRIVSQKQIAERS 185
Query: 199 ----ECGNGKVD--GPPMLAGSK 215
GN VD PP G +
Sbjct: 186 ANDESPGNNVVDISVPPTTDGQR 208
>gi|384493128|gb|EIE83619.1| GTPase [Rhizopus delemar RA 99-880]
Length = 211
Score = 203 bits (516), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 101/190 (53%), Positives = 137/190 (72%), Gaps = 8/190 (4%)
Query: 21 IPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQ 80
+ D DY+FKVV+IGDS VGK+ +L RFT+NEF +SKSTIGVEF TR++ ++ K+IKAQ
Sbjct: 1 MSDDYDYLFKVVLIGDSGVGKTNLLGRFTRNEFNLESKSTIGVEFATRSIQVDNKVIKAQ 60
Query: 81 IWDTAGQERYRAVTS-----AYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIR 135
IWDT Y TS +YYRGA+GA++ YDI+K +F+ V+RW++ELR HADS+I
Sbjct: 61 IWDTGN---YFISTSYTLNISYYRGAVGALLCYDISKHSTFESVSRWLKELRDHADSNIV 117
Query: 136 IILIGNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSK 195
I+L+GNKSDL +RAV ++A +FA + GL F E SAL+ NV+ +F R+L EI+ VS
Sbjct: 118 IMLVGNKSDLRHLRAVPTDEAKQFASENGLSFIETSALDATNVELSFQRILTEIHRIVSN 177
Query: 196 KELECGNGKV 205
K LE N +
Sbjct: 178 KALETSNNAI 187
>gi|281342890|gb|EFB18474.1| hypothetical protein PANDA_016684 [Ailuropoda melanoleuca]
Length = 199
Score = 202 bits (515), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 96/166 (57%), Positives = 129/166 (77%)
Query: 31 VVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTAGQERY 90
VV+IG+S VGK+ +LSRFT+NEF DS++TIGVEF TRTV + +KAQIWDTAG ERY
Sbjct: 1 VVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTAGLERY 60
Query: 91 RAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDLVDMRA 150
RA+TSAYYRGA+GA++V+D+TK Q++ V RW++EL HA+++I ++L+GNKSDL R
Sbjct: 61 RAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLQQARE 120
Query: 151 VSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKK 196
V E+A FAE+ GL F E SAL+ NV+ AF +L+EI+ VSK+
Sbjct: 121 VPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFTKVSKQ 166
>gi|71034167|ref|XP_766725.1| hypothetical protein [Theileria parva strain Muguga]
gi|68353682|gb|EAN34442.1| GTP-binding protein rab11, putative [Theileria parva]
gi|110825814|gb|ABH00983.1| small GTP-binding protein [Theileria parva]
Length = 212
Score = 202 bits (514), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 97/165 (58%), Positives = 122/165 (73%), Gaps = 1/165 (0%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTI-NGKIIKAQIWDT 84
DY+FK+V+IGDS VGKS +L RF K F DSKSTIGVEF T+ V + NGK+ KAQIWDT
Sbjct: 8 DYLFKIVLIGDSNVGKSNLLDRFVKGNFKLDSKSTIGVEFATKNVNLRNGKVAKAQIWDT 67
Query: 85 AGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSD 144
AGQERYRA+TSAYYRGA GA+VVYDI +QSF +V+RW+ EL + D+++ I L+GNKSD
Sbjct: 68 AGQERYRAITSAYYRGARGAIVVYDIASKQSFYNVSRWLSELNEYGDANMIIALVGNKSD 127
Query: 145 LVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEI 189
L +R V+ ED +A+ L F E S L+ +N+DT F LL I
Sbjct: 128 LTHLREVTYEDGERYAKSNNLIFFETSCLSNENIDTTFTELLNLI 172
>gi|363746030|ref|XP_003643501.1| PREDICTED: ras-related protein Rab-11A-like, partial [Gallus
gallus]
Length = 156
Score = 202 bits (513), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 95/155 (61%), Positives = 124/155 (80%)
Query: 32 VVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTAGQERYR 91
V+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++ K +KAQIWDTAGQERYR
Sbjct: 1 VLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDNKTVKAQIWDTAGQERYR 60
Query: 92 AVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDLVDMRAV 151
A+TSAYYRGA+GA++VYDI K ++++ RW+ EL+ HAD++I I+L+GNKSDL +RAV
Sbjct: 61 AITSAYYRGAVGALLVYDIAKYLTYENAERWLAELQDHADANIVIMLVGNKSDLRHLRAV 120
Query: 152 SAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLL 186
++A FAE GL F E SAL+ NV+TAF +L
Sbjct: 121 PTDEARSFAERNGLSFLETSALDSTNVETAFHNIL 155
>gi|145529147|ref|XP_001450362.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74831336|emb|CAI39285.1| rab_B71 [Paramecium tetraurelia]
gi|74833805|emb|CAI39363.1| rab_A71 [Paramecium tetraurelia]
gi|124417973|emb|CAK82965.1| unnamed protein product [Paramecium tetraurelia]
Length = 213
Score = 202 bits (513), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 91/174 (52%), Positives = 128/174 (73%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
++ D++FK+V+IGDS VGK+ IL RF N+F +SK TIGVEF T+T+ +GK +K QIW
Sbjct: 7 EEYDFLFKIVLIGDSGVGKTNILKRFINNDFQLESKPTIGVEFATKTLQQSGKSVKCQIW 66
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+T+AYYRGA+GA + YD+T+ +F + +W+ EL+ HAD +I II+IGNK
Sbjct: 67 DTAGQERYRAITNAYYRGAVGAFICYDVTREPTFKNTEKWLAELKEHADGNIVIIMIGNK 126
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKK 196
+D VD RAV ++A F E Q + F E SAL+G N+D AF +++ I+ + K
Sbjct: 127 TDAVDQRAVRTDEASNFCEQQKIGFIETSALDGTNIDVAFNKIVANIFHTIGSK 180
>gi|255646177|gb|ACU23574.1| unknown [Glycine max]
Length = 218
Score = 201 bits (512), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 100/206 (48%), Positives = 140/206 (67%), Gaps = 9/206 (4%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
++ DY+FK V+IGDS VGKS ++SRF K+EF DSK TIGVEF R + + K+IKAQIW
Sbjct: 9 EQCDYLFKAVLIGDSGVGKSNLISRFAKDEFRLDSKPTIGVEFAYRNIKVRDKLIKAQIW 68
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQER+RA+TS+YYRGALGA++VYDITKR +F +V +W+ ELR + ++L+GNK
Sbjct: 69 DTAGQERFRAITSSYYRGALGAMLVYDITKRATFVNVGKWLHELREFGGEDMVVVLVGNK 128
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
SDL R V E+ AE + L F E SAL NVD AF ++ +I+ +S+K LE
Sbjct: 129 SDLDQSRQVEREEGKVVAETEELCFMETSALQNLNVDEAFLEMITKIHDIISQKSLE--- 185
Query: 203 GKVDGPPMLAGSKIDVISGADLEISE 228
+ G+ +++ SG ++ I++
Sbjct: 186 ------TKMNGTALNLPSGKEIHIAD 205
>gi|224002539|ref|XP_002290941.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220972717|gb|EED91048.1| predicted protein, partial [Thalassiosira pseudonana CCMP1335]
Length = 172
Score = 201 bits (512), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 99/172 (57%), Positives = 128/172 (74%), Gaps = 1/172 (0%)
Query: 27 YVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTI-NGKIIKAQIWDTA 85
Y FK+V++GDS VGKS ++ RFTKNEF DSKSTIGVEF T+TV I + K++KAQIWDTA
Sbjct: 1 YSFKIVLLGDSGVGKSNLVFRFTKNEFNKDSKSTIGVEFATKTVQIEDDKLVKAQIWDTA 60
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQERYR++ S+YYRGA+GA++VYD+T R SF+HV W++E+ +A+ I+L+GNK DL
Sbjct: 61 GQERYRSIASSYYRGAVGALLVYDVTDRNSFNHVPMWLKEVEENAEKDCLIMLVGNKMDL 120
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKE 197
+ R V D FA GL F E SAL+ VDTAF R+LQEIY +KK+
Sbjct: 121 HEQRTVFVRDGRSFARKNGLAFIETSALDATGVDTAFQRILQEIYKTQTKKQ 172
>gi|355714881|gb|AES05148.1| RAB25, member RAS oncoprotein family [Mustela putorius furo]
Length = 199
Score = 201 bits (512), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 97/166 (58%), Positives = 128/166 (77%)
Query: 31 VVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTAGQERY 90
VV+IG+S VGK+ +LSRFT+NEF DS++TIGVEF TRTVT+ IKAQIWDTAG ERY
Sbjct: 1 VVLIGESGVGKTNLLSRFTRNEFKQDSRTTIGVEFSTRTVTLGTAAIKAQIWDTAGLERY 60
Query: 91 RAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDLVDMRA 150
RA+TSAYYRGA+GA++V+D+TK Q++ RW++EL HA+++I ++L+GNKSDL R
Sbjct: 61 RAITSAYYRGAVGALLVFDLTKHQTYAVAERWLKELYDHAEATIVVMLVGNKSDLQQARE 120
Query: 151 VSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKK 196
V E+A FAE+ GL F E SAL+ NV+ AF +L+EI VSK+
Sbjct: 121 VPTEEARMFAENNGLLFLETSALDSTNVELAFQTVLKEILTKVSKQ 166
>gi|332205939|ref|NP_001193765.1| ras-related protein Rab-11A isoform 2 [Homo sapiens]
gi|332235942|ref|XP_003267164.1| PREDICTED: ras-related protein Rab-11A isoform 3 [Nomascus
leucogenys]
gi|332844085|ref|XP_003314767.1| PREDICTED: uncharacterized protein LOC453523 isoform 1 [Pan
troglodytes]
gi|397515598|ref|XP_003828036.1| PREDICTED: ras-related protein Rab-11A isoform 2 [Pan paniscus]
gi|402874625|ref|XP_003901133.1| PREDICTED: ras-related protein Rab-11A isoform 2 [Papio anubis]
gi|426379451|ref|XP_004056411.1| PREDICTED: ras-related protein Rab-11A isoform 3 [Gorilla gorilla
gorilla]
gi|194390126|dbj|BAG61825.1| unnamed protein product [Homo sapiens]
Length = 155
Score = 201 bits (511), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 93/139 (66%), Positives = 119/139 (85%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIW
Sbjct: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI K ++++V RW++ELR HADS+I I+L+GNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNK 125
Query: 143 SDLVDMRAVSAEDAVEFAE 161
SDL +RAV ++A FAE
Sbjct: 126 SDLRHLRAVPTDEARAFAE 144
>gi|399217959|emb|CCF74846.1| unnamed protein product [Babesia microti strain RI]
Length = 213
Score = 201 bits (511), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 94/174 (54%), Positives = 128/174 (73%), Gaps = 1/174 (0%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRT-VTINGKIIKAQI 81
D DY++K+V+IGDS VGKS +L+R+TKNEF +SKSTIGVEF T + NGK+ K QI
Sbjct: 5 DSYDYLYKIVLIGDSNVGKSNLLTRYTKNEFNLESKSTIGVEFATNAHILKNGKVCKVQI 64
Query: 82 WDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGN 141
WDTAGQERYRA+TSAYYRGA+GA++ YDIT R SF++V RW++ELR +A I L+GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALICYDITSRSSFENVKRWLKELRDYAPPHSVICLVGN 124
Query: 142 KSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSK 195
K D+V++R V+ ++ + A + + F E SAL+ NV+ AF L++ IY +K
Sbjct: 125 KVDMVNLRQVTKDEGAKLARLENILFLECSALDSTNVNAAFAELIETIYTTQAK 178
>gi|403300397|ref|XP_003940927.1| PREDICTED: ras-related protein Rab-11A isoform 2 [Saimiri
boliviensis boliviensis]
Length = 155
Score = 201 bits (511), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 93/139 (66%), Positives = 119/139 (85%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIW
Sbjct: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI K ++++V RW++ELR HADS+I I+L+GNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNK 125
Query: 143 SDLVDMRAVSAEDAVEFAE 161
SDL +RAV ++A FAE
Sbjct: 126 SDLRHLRAVPTDEARAFAE 144
>gi|300176554|emb|CBK24219.2| unnamed protein product [Blastocystis hominis]
Length = 281
Score = 201 bits (510), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 90/171 (52%), Positives = 130/171 (76%), Gaps = 2/171 (1%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
++ DY+F V+IGD+ VGK+ IL+R+ KNEF+ D+KST+GVEF ++ VTI+ K IKAQIW
Sbjct: 8 ERYDYLF--VLIGDTGVGKTNILTRYAKNEFYTDTKSTVGVEFASKCVTIDNKTIKAQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDIT R +FD++ W+ EL ++D+ + I+L+GNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGALLVYDITVRSTFDNIGVWLAELSHYSDNDMTIVLVGNK 125
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAV 193
DL ++R + +++AV+FAE + F E SA + +D AF +L IY +
Sbjct: 126 CDLANLRVIESQEAVQFAEQHNIAFIETSAYDSTGIDKAFETILSGIYTCI 176
>gi|148678258|gb|EDL10205.1| mCG22989, isoform CRA_a [Mus musculus]
Length = 149
Score = 201 bits (510), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 93/139 (66%), Positives = 119/139 (85%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIW
Sbjct: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI K ++++V RW++ELR HADS+I I+L+GNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNK 125
Query: 143 SDLVDMRAVSAEDAVEFAE 161
SDL +RAV ++A FAE
Sbjct: 126 SDLRHLRAVPTDEARAFAE 144
>gi|145534648|ref|XP_001453068.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74833730|emb|CAI39337.1| rab_C74 [Paramecium tetraurelia]
gi|124420768|emb|CAK85671.1| unnamed protein product [Paramecium tetraurelia]
Length = 213
Score = 201 bits (510), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 92/174 (52%), Positives = 126/174 (72%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
DY+FK+V+IGDS VGK+ IL RF NEF +SK TIGVEF T+T GK +K QIWDTA
Sbjct: 10 DYLFKIVLIGDSGVGKTNILKRFINNEFQLESKPTIGVEFATKTFQQQGKSVKCQIWDTA 69
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQER+RA+T+AYYRGA+GA + YDIT+ +F + +W+ EL+ HAD +I II+IGNK D
Sbjct: 70 GQERFRAITNAYYRGAVGAFICYDITREITFKNTEKWLSELKEHADGNIVIIMIGNKIDA 129
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELE 199
VD RAV ++A ++ E Q + F E SAL+G N+D AF +++ I+ + K ++
Sbjct: 130 VDSRAVRTDEAQDYCESQKIGFIETSALDGTNIDVAFNKIVANIFNTIGSKNIK 183
>gi|1370152|emb|CAA98182.1| RAB11F [Lotus japonicus]
Length = 218
Score = 200 bits (508), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 107/214 (50%), Positives = 148/214 (69%), Gaps = 4/214 (1%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
++ DY+FK V+IGDS VGKS ++SRF K+EF DSK TIGVEF R + + K+IKAQIW
Sbjct: 8 EQCDYLFKAVLIGDSGVGKSNLISRFAKDEFRLDSKPTIGVEFAYRNIKVRDKLIKAQIW 67
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQER+RA+TS+YYRGALG ++VYDIT+R +F +V +W+ ELR + + ++L+ NK
Sbjct: 68 DTAGQERFRAITSSYYRGALGPMLVYDITRRPTFMNVIKWLHELREFGNEDMVVVLVANK 127
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
SDLV R V E+ EFAE +GL F E SAL NV+ AF ++ +I+ +S+K LE
Sbjct: 128 SDLVQSREVEKEEGEEFAEIEGLCFMETSALQNLNVEEAFLEMITKIHDIISQKSLET-- 185
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
K++GP L+ I AD E++ K+ + CS
Sbjct: 186 -KMNGPTTLSVPIGKEIQVAD-EVTATKQANCCS 217
>gi|9719734|gb|AAF97836.1|AC034107_19 Contains similarity to ras-related GTP binding protein from Oryza
sativa gb|D13758 and is a member of the Ras PF|00071
family [Arabidopsis thaliana]
Length = 326
Score = 199 bits (507), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 101/210 (48%), Positives = 142/210 (67%), Gaps = 11/210 (5%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
++ DY+FK V+IGDSAVGKS +LSRF+++EF DSK TIGV+F R V + K IKAQIW
Sbjct: 8 EECDYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTIGVDFAYRNVRVGDKTIKAQIW 67
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQER+RA+TS+YYRGALGA+++YDIT+R +F ++ +W+ ELR + ++L+GNK
Sbjct: 68 DTAGQERFRAITSSYYRGALGALLIYDITRRITFKNIEKWLSELRGFSSPETVVVLVGNK 127
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL---- 198
SDL R V E+ AE +GL+F E SAL NV+ AF ++ I+ +++K +
Sbjct: 128 SDLGQSREVEEEEGKTLAESEGLYFLETSALENQNVEEAFLSMIGRIHEVLTQKIVLDNR 187
Query: 199 --ECGNGKVDG---PP--MLAGSKIDVISG 221
GN + +G PP +A S I + SG
Sbjct: 188 LNGDGNNESNGAVVPPGKEIAESPISIRSG 217
>gi|449439127|ref|XP_004137339.1| PREDICTED: ras-related protein RABA6a-like [Cucumis sativus]
gi|449497494|ref|XP_004160418.1| PREDICTED: ras-related protein RABA6a-like [Cucumis sativus]
Length = 218
Score = 199 bits (507), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 93/174 (53%), Positives = 126/174 (72%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
DY+FK V+ GDS VGKS +LSRF+KNEF FDS+ TIGVEF R + + K++K QIWDTA
Sbjct: 10 DYLFKAVLTGDSGVGKSNLLSRFSKNEFRFDSRPTIGVEFAYRNIKVADKLVKTQIWDTA 69
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQER+RA+TS+YYRGALGA++VYDIT+ +FD++ +W+ ELR + + IIL+GNK DL
Sbjct: 70 GQERFRAITSSYYRGALGALLVYDITRVATFDNIKKWLRELREFGNPEMVIILVGNKCDL 129
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELE 199
R V E+A AE + LFF E SA + NV+ AF +++ I+ S+K L+
Sbjct: 130 HQSREVQEEEARHLAELENLFFMETSAKDNLNVEEAFLEMVRRIHAIASQKTLD 183
>gi|297850210|ref|XP_002892986.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297338828|gb|EFH69245.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 229
Score = 199 bits (507), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 91/174 (52%), Positives = 127/174 (72%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
++ DY+FK V+IGDSAVGKS +LSRF+++EF DSK TIGV+F R V + K IKAQIW
Sbjct: 8 EECDYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTIGVDFAYRNVRVGDKTIKAQIW 67
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQER+RA+TS+YYRGALGA+++YDIT+R +F ++ +W+ ELR + ++L+GNK
Sbjct: 68 DTAGQERFRAITSSYYRGALGALLIYDITRRITFKNIGKWLSELRGFSSPETVVVLVGNK 127
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKK 196
SDL R V E+ AE +GL+F E SAL NV+ AF ++ I+ +++K
Sbjct: 128 SDLGQSREVEEEEGKTLAESEGLYFLETSALENQNVEEAFLSMIGRIHEVLTQK 181
>gi|145335857|ref|NP_173258.2| RAB GTPase homolog A6B [Arabidopsis thaliana]
gi|332320574|sp|Q0WQN4.2|RAA6B_ARATH RecName: Full=Ras-related protein RABA6b; Short=AtRABA6b
gi|332191565|gb|AEE29686.1| RAB GTPase homolog A6B [Arabidopsis thaliana]
Length = 229
Score = 199 bits (507), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 102/218 (46%), Positives = 145/218 (66%), Gaps = 10/218 (4%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
++ DY+FK V+IGDSAVGKS +LSRF+++EF DSK TIGV+F R V + K IKAQIW
Sbjct: 8 EECDYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTIGVDFAYRNVRVGDKTIKAQIW 67
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQER+RA+TS+YYRGALGA+++YDIT+R +F ++ +W+ ELR + ++L+GNK
Sbjct: 68 DTAGQERFRAITSSYYRGALGALLIYDITRRITFKNIEKWLSELRGFSSPETVVVLVGNK 127
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKK-----E 197
SDL R V E+ AE +GL+F E SAL NV+ AF ++ I+ +++K
Sbjct: 128 SDLGQSREVEEEEGKTLAESEGLYFLETSALENQNVEEAFLSMIGRIHEVLTQKIVLDNR 187
Query: 198 LEC-GNGKVDGPPMLAGSKIDVISGADLEISEMKKLST 234
L GN + +G + G +I I E++ + LST
Sbjct: 188 LNGDGNNESNGAVVPPGKEIVNIH----EVTATRPLST 221
>gi|110737235|dbj|BAF00565.1| hypothetical protein [Arabidopsis thaliana]
Length = 229
Score = 199 bits (505), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 91/174 (52%), Positives = 127/174 (72%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
++ DY+FK V+IGDSAVGKS +LSRF+++EF DSK TIGV+F R V + K IKAQIW
Sbjct: 8 EECDYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTIGVDFAYRNVRVGDKTIKAQIW 67
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQER+RA+TS+YYRGALGA+++YDIT+R +F ++ +W+ ELR + ++L+GNK
Sbjct: 68 DTAGQERFRAITSSYYRGALGALLIYDITRRITFKNIEKWLSELRGFSSPETVVVLVGNK 127
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKK 196
SDL R V E+ AE +GL+F E SAL NV+ AF ++ I+ +++K
Sbjct: 128 SDLGQSREVEEEEGKTLAESEGLYFLETSALENQNVEEAFLSMIGRIHEVLTQK 181
>gi|167384417|ref|XP_001736944.1| rab11 [Entamoeba dispar SAW760]
gi|165900524|gb|EDR26832.1| rab11, putative [Entamoeba dispar SAW760]
Length = 213
Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 101/218 (46%), Positives = 147/218 (67%), Gaps = 5/218 (2%)
Query: 20 MIPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKA 79
M D DY++KVV+IGDS VGKS +L RFT++EF + KSTIGVEF ++ + N + ++
Sbjct: 1 MSVDDYDYLYKVVMIGDSGVGKSNLLLRFTRDEFDPEKKSTIGVEFSSKQIRYNDETVRT 60
Query: 80 QIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILI 139
QIWDTAGQERYRA+T+AYYRGALGA++VYD+TK+ SF+ + RW+ ELR +AD + +++
Sbjct: 61 QIWDTAGQERYRAITNAYYRGALGAILVYDVTKKSSFESLDRWLSELRDNADKKVVEMIV 120
Query: 140 GNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELE 199
GNK DL MR V+ ++ + A+ G FF E SAL+G NV+TAF ++Q+I ++ L
Sbjct: 121 GNKCDLEQMREVTIKEGEDMAKKIGAFFFETSALDGKNVETAFMAIIQKICDEQTR--LR 178
Query: 200 CGNGKVDGPPMLAGSKIDVISGADLEISEMKKLSTCSC 237
K P ++ SK+D+ E + K + C+C
Sbjct: 179 ASETKPVIKP-ISDSKVDIDKTP--EEQQTPKKNGCAC 213
>gi|67474054|ref|XP_652776.1| small GTPase Rab11B [Entamoeba histolytica HM-1:IMSS]
gi|13537447|dbj|BAB40678.1| small GTPase Rab11B [Entamoeba histolytica]
gi|56469662|gb|EAL47390.1| small GTPase Rab11B [Entamoeba histolytica HM-1:IMSS]
gi|449709813|gb|EMD49007.1| small GTPase Rab11B, putative [Entamoeba histolytica KU27]
Length = 211
Score = 197 bits (502), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 94/173 (54%), Positives = 126/173 (72%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
++ D+++K+V++G+S VGKS +L RFT+NEF D +STIGVEF TR++ K I+AQIW
Sbjct: 5 EEYDFLYKIVLVGESGVGKSNLLLRFTRNEFDPDKRSTIGVEFATRSINYCDKNIRAQIW 64
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+T+AYYRGALGA+VVYDITK+ SF+ V +W+ EL +AD + ++IGNK
Sbjct: 65 DTAGQERYRAITNAYYRGALGALVVYDITKKTSFESVEKWLAELHENADKKVVQMVIGNK 124
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSK 195
DL R V + E A+ FF E SAL+G NV+ AF LL++IY SK
Sbjct: 125 CDLSQTREVQTSEGEELAKKNNAFFFETSALDGSNVEEAFMTLLKKIYDDSSK 177
>gi|407043806|gb|EKE42164.1| small GTPase Rab11B, putative [Entamoeba nuttalli P19]
Length = 211
Score = 197 bits (502), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 94/173 (54%), Positives = 126/173 (72%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
++ D+++K+V++G+S VGKS +L RFT+NEF D +STIGVEF TR++ K I+AQIW
Sbjct: 5 EEYDFLYKIVLVGESGVGKSNLLLRFTRNEFDPDKRSTIGVEFATRSINYCDKNIRAQIW 64
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+T+AYYRGALGA+VVYDITK+ SF+ V +W+ EL +AD + ++IGNK
Sbjct: 65 DTAGQERYRAITNAYYRGALGALVVYDITKKTSFESVEKWLAELHENADKKVVQMVIGNK 124
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSK 195
DL R V + E A+ FF E SAL+G NV+ AF LL++IY SK
Sbjct: 125 CDLSQTREVQTTEGEELAKKNNAFFFETSALDGSNVEEAFMTLLKKIYDDSSK 177
>gi|167381877|ref|XP_001735893.1| rab11 [Entamoeba dispar SAW760]
gi|165901950|gb|EDR27906.1| rab11, putative [Entamoeba dispar SAW760]
Length = 211
Score = 197 bits (502), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 94/173 (54%), Positives = 126/173 (72%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
++ D+++K+V++G+S VGKS +L RFT+NEF D +STIGVEF TR++ K I+AQIW
Sbjct: 5 EEYDFLYKIVLVGESGVGKSNLLLRFTRNEFDPDKRSTIGVEFATRSINYCDKNIRAQIW 64
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+T+AYYRGALGA+VVYDITK+ SF+ V +W+ EL +AD + ++IGNK
Sbjct: 65 DTAGQERYRAITNAYYRGALGALVVYDITKKTSFESVEKWLAELHENADKKVVQMVIGNK 124
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSK 195
DL R V + E A+ FF E SAL+G NV+ AF LL++IY SK
Sbjct: 125 CDLNQTREVQTSEGEELAKKNNAFFFETSALDGSNVEEAFMTLLKKIYDDSSK 177
>gi|148908271|gb|ABR17250.1| unknown [Picea sitchensis]
Length = 214
Score = 197 bits (501), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 102/191 (53%), Positives = 130/191 (68%), Gaps = 4/191 (2%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
DY+FKV+ GDS+VGKS I+SR T+N F K T+GVEF T+ GK I AQIWDT
Sbjct: 10 DYLFKVMFTGDSSVGKSNIISRLTRNYFSHQCKPTVGVEFGIYTIQDKGKTIAAQIWDTC 69
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
G ERY + T + YRG GAV+VYDIT+R++F++V +W++ELR HA+S+ I+LIGNKSDL
Sbjct: 70 GLERYASFTKSCYRGVAGAVLVYDITRRRTFENVGKWLKELRDHANSNPVIMLIGNKSDL 129
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL--ECGNG 203
+R+VS EDA +FAE +GL F E SA NVD A +LQEI+ S+KEL E NG
Sbjct: 130 QHLRSVSTEDAQKFAEKEGLLFMETSAFKSTNVDKALQIILQEIHRVFSEKELHSEESNG 189
Query: 204 --KVDGPPMLA 212
DG P
Sbjct: 190 VSTQDGKPTFG 200
>gi|145510136|ref|XP_001441001.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834514|emb|CAI44569.1| rab_A27 [Paramecium tetraurelia]
gi|124408240|emb|CAK73604.1| unnamed protein product [Paramecium tetraurelia]
Length = 205
Score = 197 bits (501), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 89/165 (53%), Positives = 132/165 (80%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
D ++K+V+IGDS VGK+ IL++FT+ EF DSK+TIGVEF ++ V ++ K IKAQIWDTA
Sbjct: 9 DLLYKLVLIGDSGVGKTNILNQFTRGEFLQDSKTTIGVEFASKNVILDDKTIKAQIWDTA 68
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQERYRA+TSAYYRGA+GA+++YDITK +F++V +W++EL+ +AD S++I+++GNK+D
Sbjct: 69 GQERYRAITSAYYRGAVGAMIIYDITKSLTFENVDKWMKELKENADPSLQIMIVGNKTDQ 128
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIY 190
+R V+ + A+ +A+ G+ F E SA +G NV+ AF +LQ+IY
Sbjct: 129 KHIRQVATDCAIAYAQRNGVAFIETSAKDGTNVEDAFKNILQQIY 173
>gi|145549438|ref|XP_001460398.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834400|emb|CAI44535.1| rab_B27 [Paramecium tetraurelia]
gi|124428228|emb|CAK93001.1| unnamed protein product [Paramecium tetraurelia]
Length = 205
Score = 197 bits (500), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 88/165 (53%), Positives = 132/165 (80%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
D ++K+V+IGDS VGK+ IL++FT+ EF DSK+TIGVEF ++ + I+ K +KAQIWDTA
Sbjct: 9 DLLYKLVLIGDSGVGKTNILNQFTRGEFLQDSKTTIGVEFASKNIMIDDKTVKAQIWDTA 68
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQERYRA+TSAYYRGA+GA+++YDITK +F++V +W++EL+ +AD S++I+++GNK+D
Sbjct: 69 GQERYRAITSAYYRGAVGAMIIYDITKSLTFENVDKWMKELKENADPSLQIMIVGNKTDQ 128
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIY 190
+R V+ + A+ +A+ G+ F E SA +G NV+ AF +LQ+IY
Sbjct: 129 KHIRQVATDCAIAYAQRNGVAFIETSAKDGTNVEDAFKNILQQIY 173
>gi|363746901|ref|XP_003643843.1| PREDICTED: ras-related protein Rab-25-like, partial [Gallus gallus]
Length = 156
Score = 197 bits (500), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 94/156 (60%), Positives = 123/156 (78%)
Query: 32 VVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTAGQERYR 91
V+IG+S VGK+ +LSRFT+NEF DS++TIGVEF TRTV + +KAQIWDTAG ERYR
Sbjct: 1 VLIGESGVGKTNLLSRFTRNEFNHDSRTTIGVEFSTRTVLVGDAAVKAQIWDTAGLERYR 60
Query: 92 AVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDLVDMRAV 151
A+TSAYYRGA+GA+VV+DITK Q++D V RW++EL HA++SI ++L+GNKSDL R V
Sbjct: 61 AITSAYYRGAVGALVVFDITKHQTYDVVERWLKELYDHAEASIVVMLVGNKSDLAQEREV 120
Query: 152 SAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQ 187
E+A FAE++GL F E SAL+ NV+ AF +L+
Sbjct: 121 PTEEAKMFAENKGLLFIETSALDSTNVEEAFETVLK 156
>gi|67473696|ref|XP_652598.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|56469466|gb|EAL47212.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|56790052|dbj|BAD82822.1| small GTPase EhRab11D [Entamoeba histolytica]
gi|407040023|gb|EKE39941.1| Rab family GTPase [Entamoeba nuttalli P19]
gi|449703380|gb|EMD43841.1| small GTPase EhRab11D, putative [Entamoeba histolytica KU27]
Length = 213
Score = 197 bits (500), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 101/218 (46%), Positives = 146/218 (66%), Gaps = 5/218 (2%)
Query: 20 MIPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKA 79
M D DY++KVV+IGDS VGKS +L RFT++EF + KSTIGVEF ++ + N + ++
Sbjct: 1 MSVDDYDYLYKVVMIGDSGVGKSNLLLRFTRDEFDPEKKSTIGVEFSSKQIRYNDETVRT 60
Query: 80 QIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILI 139
QIWDTAGQERYRA+T+AYYRGALGA++VYD+TK+ SF+ + RW+ ELR +AD + +++
Sbjct: 61 QIWDTAGQERYRAITNAYYRGALGAILVYDVTKKSSFESLDRWLSELRDNADKKVVEMIV 120
Query: 140 GNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELE 199
GNK DL MR VS ++ + A+ G FF E SA +G NV+TAF ++Q+I ++ L
Sbjct: 121 GNKCDLEQMREVSIKEGEDMAKKIGAFFFETSAFDGKNVETAFMAIIQKICDEQTR--LR 178
Query: 200 CGNGKVDGPPMLAGSKIDVISGADLEISEMKKLSTCSC 237
K P ++ SK+++ E + K S C+C
Sbjct: 179 ASETKPVIKP-ISDSKVEIDKTP--EEQQTPKKSGCAC 213
>gi|351722452|ref|NP_001235197.1| uncharacterized protein LOC100306448 [Glycine max]
gi|255628567|gb|ACU14628.1| unknown [Glycine max]
Length = 147
Score = 197 bits (500), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 88/136 (64%), Positives = 117/136 (86%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
DY+FKVV+IGDS VGKS +LSRFTKNEF +SKSTIGVEF TR++ ++ K++KAQIWDTA
Sbjct: 11 DYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVLKAQIWDTA 70
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQERYRA+TSAYYRGA+GA++VYD+T+ +F++V RW++ELR H D++I ++L+GNK+DL
Sbjct: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVVMLVGNKADL 130
Query: 146 VDMRAVSAEDAVEFAE 161
+RAVS E+ FAE
Sbjct: 131 RHLRAVSTEETTNFAE 146
>gi|125553326|gb|EAY99035.1| hypothetical protein OsI_20993 [Oryza sativa Indica Group]
Length = 181
Score = 196 bits (499), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 98/182 (53%), Positives = 132/182 (72%), Gaps = 5/182 (2%)
Query: 55 FDSKSTIGVEFQTRTVTINGKIIKAQIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQ 114
+SKSTIGVEF TR++ ++ K++KAQIWDTAGQERYRA+TSAYYRGA+GA+VVYD+T+
Sbjct: 3 LESKSTIGVEFATRSIHVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALVVYDVTRHV 62
Query: 115 SFDHVARWVEELRAHADSSIRIILIGNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALN 174
+F++V RW+ EL+ H D++I I+L+GNK+DL +RAVS EDA FAE + FF E SAL
Sbjct: 63 TFENVERWMRELKDHTDANIVIMLVGNKADLRHLRAVSTEDAKAFAEKENTFFMETSALE 122
Query: 175 GDNVDTAFFRLLQEIYGAVSKKELECGNGKVDGPPMLAGSKIDVISGADLEISEMKKLST 234
NV+ AF +L +IY VSKK L+ G+ PP G I+V G ++S +KK +
Sbjct: 123 SMNVENAFTEVLTQIYHVVSKKALDIGDDPA-APP--KGQTINV--GGKDDVSAVKKSAC 177
Query: 235 CS 236
CS
Sbjct: 178 CS 179
>gi|67466968|ref|XP_649609.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|56466088|gb|EAL44223.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|449710050|gb|EMD49193.1| Rab family gtpase [Entamoeba histolytica KU27]
Length = 212
Score = 196 bits (499), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 92/163 (56%), Positives = 120/163 (73%)
Query: 28 VFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTAGQ 87
++K+V+IG+S VGKS +L RFT+NEF + K TIGVEF TRT+ GK I+AQIWDTAGQ
Sbjct: 8 MYKLVIIGESGVGKSNLLLRFTRNEFEPEKKFTIGVEFATRTIEYEGKTIRAQIWDTAGQ 67
Query: 88 ERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDLVD 147
E+YRA+T AYYRGA GA+ VYD++K+ SFD + RW+ EL+ DS I I+++GNK+DL
Sbjct: 68 EKYRAITDAYYRGAEGAMCVYDVSKKDSFDAIERWMNELKNGCDSDITIMIVGNKADLKQ 127
Query: 148 MRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIY 190
R V+ D EFA+ FF E SAL+G NV+ AF LL +IY
Sbjct: 128 EREVNTSDGTEFAQKHSAFFIETSALDGTNVEKAFSDLLIQIY 170
>gi|407039687|gb|EKE39771.1| Rab family GTPase [Entamoeba nuttalli P19]
Length = 212
Score = 196 bits (499), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 92/163 (56%), Positives = 120/163 (73%)
Query: 28 VFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTAGQ 87
++K+V+IG+S VGKS +L RFT+NEF + K TIGVEF TRT+ GK I+AQIWDTAGQ
Sbjct: 8 MYKLVIIGESGVGKSNLLLRFTRNEFEPEKKFTIGVEFATRTIEYEGKTIRAQIWDTAGQ 67
Query: 88 ERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDLVD 147
E+YRA+T AYYRGA GA+ VYD++K+ SFD + RW+ EL+ DS I I+++GNK+DL
Sbjct: 68 EKYRAITDAYYRGAEGAMCVYDVSKKDSFDAIERWMNELKNGCDSDITIMIVGNKADLKQ 127
Query: 148 MRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIY 190
R V+ D EFA+ FF E SAL+G NV+ AF LL +IY
Sbjct: 128 EREVNTSDGTEFAQKHSAFFIETSALDGTNVEKAFSDLLIQIY 170
>gi|46559001|emb|CAG27070.1| small GTPase [Medicago sativa]
Length = 218
Score = 196 bits (498), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 106/219 (48%), Positives = 147/219 (67%), Gaps = 9/219 (4%)
Query: 20 MIPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKA 79
+ ++ DY+FK V+IGDS VGKS +LSRF K+EF DSK TIGVEF R + + K+IKA
Sbjct: 7 IFEEECDYLFKAVLIGDSGVGKSNLLSRFAKDEFRLDSKPTIGVEFAYRNIKVRDKLIKA 66
Query: 80 QIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILI 139
QIWDTAGQER+RA+TS+YYRGALGA++VYDIT+R S++ V RW+ ELR + +IL+
Sbjct: 67 QIWDTAGQERFRAITSSYYRGALGALLVYDITRRSSYESVGRWLVELREFGGEEMVVILV 126
Query: 140 GNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELE 199
GNK DL + R V E+A FAE +GL F E SAL NV+ F +++ I+ +++ L
Sbjct: 127 GNKCDLGESREVEEEEAKGFAEAEGLCFMETSALKNLNVEQVFLQMITTIFDITNQRSL- 185
Query: 200 CGNGKVDGPP--MLAGSKIDVISGADLEISEMKKLSTCS 236
+ K+D P + G +I + AD E++ K+ CS
Sbjct: 186 --DAKMDETPINLSNGKEIHI---AD-EVTATKQAPCCS 218
>gi|162464337|ref|NP_001105300.1| small GTP binding protein2 [Zea mays]
gi|1020093|dbj|BAA06702.1| mgp2 GTP-binding protein [Zea mays]
Length = 216
Score = 196 bits (498), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 106/194 (54%), Positives = 134/194 (69%), Gaps = 20/194 (10%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
DYVFKVVVIGDS VGKSQ+L F +N +SKSTIGVEF TR++ K++KAQIWDTA
Sbjct: 9 DYVFKVVVIGDSGVGKSQLLMGFARNHNL-ESKSTIGVEFATRSIRFEDKVVKAQIWDTA 67
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQERYRA+TSAYYRGA+GA++VYD+T+ +F++V RW++ELR H DS+I I+L+GNK+DL
Sbjct: 68 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADL 127
Query: 146 VDMRAVSAEDAVEFAEDQGLFF------SEASALNGDNVDTAFFRLLQEIYGAVSKKELE 199
+RAV+ EDA FAE + FF E SAL AF +L +IY S+K L
Sbjct: 128 RHLRAVATEDAKAFAEMESTFFMGNIRYGETSALK-----EAFKNVLTDIYRIASQKNLS 182
Query: 200 C--------GNGKV 205
G GKV
Sbjct: 183 ANAAQTHLQGQGKV 196
>gi|357521613|ref|XP_003631095.1| Ras-related protein Rab-11A [Medicago truncatula]
gi|355525117|gb|AET05571.1| Ras-related protein Rab-11A [Medicago truncatula]
Length = 265
Score = 196 bits (498), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 99/194 (51%), Positives = 136/194 (70%), Gaps = 3/194 (1%)
Query: 17 QENMIPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKI 76
Q+ + ++ DY+FK V+IGDS VGKS +LSRF K+EF DSK TIGVEF R + + K+
Sbjct: 3 QDAIFDEECDYLFKAVLIGDSGVGKSNLLSRFAKDEFRLDSKPTIGVEFAYRNIKVRDKL 62
Query: 77 IKAQIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRI 136
IKAQIWDTAGQER+RA+TS+YYRGALGA++VYDIT+R S++ V RW+ ELR + +
Sbjct: 63 IKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRSSYESVGRWLVELREFGGEEMVV 122
Query: 137 ILIGNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKK 196
IL+GNK DL + R V E+A FAE +GL F E SAL NV+ F +++ I+ +++
Sbjct: 123 ILVGNKCDLGESREVEEEEAKRFAEAEGLCFMETSALKNLNVEQVFLQMITTIFDITNQR 182
Query: 197 ELECGNGKVDGPPM 210
L + K+D P+
Sbjct: 183 SL---DAKMDETPI 193
>gi|117939085|dbj|BAF36696.1| Small G Protein RAB [Symbiotic protist of Reticulitermes speratus]
Length = 200
Score = 196 bits (498), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 95/163 (58%), Positives = 124/163 (76%)
Query: 31 VVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTAGQERY 90
+V+IGDS VGKS +L R+TKNEF +SKSTIGVEF T+++ + K IKAQIWDTAGQ+RY
Sbjct: 1 IVLIGDSGVGKSNLLLRYTKNEFNLESKSTIGVEFATKSIQFDNKTIKAQIWDTAGQDRY 60
Query: 91 RAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDLVDMRA 150
RAVTSA YRGA+GA++VYDI+K ++++V +W++ELR AD SI I+L+GNKSDL +R
Sbjct: 61 RAVTSACYRGAVGALLVYDISKHTTYENVDKWLKELRDQADPSIVIMLVGNKSDLRHLRN 120
Query: 151 VSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAV 193
V E+A FA+ L F E SA NV++AF +LQEIY V
Sbjct: 121 VPTEEAKSFAQRNNLSFIETSASQSTNVESAFNTILQEIYKNV 163
>gi|167378360|ref|XP_001734772.1| rab11 [Entamoeba dispar SAW760]
gi|165903573|gb|EDR29063.1| rab11, putative [Entamoeba dispar SAW760]
Length = 212
Score = 196 bits (498), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 92/163 (56%), Positives = 119/163 (73%)
Query: 28 VFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTAGQ 87
++K+V+IG+S VGKS +L RFT+NEF + K TIGVEF TRT+ GK I+AQIWDTAGQ
Sbjct: 8 MYKLVIIGESGVGKSNLLLRFTRNEFEPEKKFTIGVEFATRTIEYEGKTIRAQIWDTAGQ 67
Query: 88 ERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDLVD 147
E+YRA+T AYYRGA GA+ VYD++K+ SFD + RW+ EL+ DS I I+++GNK+DL
Sbjct: 68 EKYRAITDAYYRGAEGAMCVYDVSKKDSFDAIERWMNELKNGCDSDITIMIVGNKADLKQ 127
Query: 148 MRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIY 190
R V+ D EFA+ FF E SAL G NV+ AF LL +IY
Sbjct: 128 EREVNTSDGTEFAQKHSAFFIETSALEGTNVEKAFSDLLIQIY 170
>gi|225705282|gb|ACO08487.1| Ras-related protein Rab-11B [Oncorhynchus mykiss]
Length = 150
Score = 196 bits (498), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 90/145 (62%), Positives = 120/145 (82%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ D++FKVV+IGDS VGKS +LSRFT+N+F +SKSTIGVEF TR++ ++GK IKAQIW
Sbjct: 6 DEYDFLFKVVLIGDSGVGKSNLLSRFTRNDFNLESKSTIGVEFATRSIQVDGKTIKAQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI K ++++V RW++ELR HAD++I I+L GNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLAGNK 125
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFF 167
SDL +RAV ++A FAE + +
Sbjct: 126 SDLRHLRAVPTDEARAFAEKNTILY 150
>gi|351696645|gb|EHA99563.1| Ras-related protein Rab-25 [Heterocephalus glaber]
Length = 212
Score = 196 bits (497), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 96/178 (53%), Positives = 131/178 (73%), Gaps = 1/178 (0%)
Query: 19 NMIPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIK 78
N + ++VFKVV+IG+S VGK+ +LSRFT+NEF DS++TIGVEF TRTV + IK
Sbjct: 3 NRAEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAIK 62
Query: 79 AQIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIIL 138
AQIWDTAG E YR T YYRGA+GA++V+D+TK Q++ V RW++EL HA+++I ++L
Sbjct: 63 AQIWDTAGLELYRG-TRRYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVML 121
Query: 139 IGNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKK 196
+GNKSDL R V ++A FAE+ GL F E SAL+ NV+ AF +L+EI+ VSK+
Sbjct: 122 VGNKSDLSQAREVPTDEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQ 179
>gi|313216504|emb|CBY37802.1| unnamed protein product [Oikopleura dioica]
gi|313232450|emb|CBY24118.1| unnamed protein product [Oikopleura dioica]
Length = 216
Score = 196 bits (497), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 98/216 (45%), Positives = 134/216 (62%), Gaps = 4/216 (1%)
Query: 22 PDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQI 81
P DY+ K ++IGD VGKS +L +FT+ +F D TIGVE+ TR + + G+ IK QI
Sbjct: 5 PYNYDYILKYIIIGDQGVGKSCLLHQFTEKKFMADCPHTIGVEYGTRIIEVAGQRIKLQI 64
Query: 82 WDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGN 141
WDTAGQER+RAVT +YYRG+ GA++VYDIT+RQ+F+H+ W+ + HA + I LIGN
Sbjct: 65 WDTAGQERFRAVTRSYYRGSSGAIMVYDITRRQTFNHLEAWLTDATNHASPNTVIFLIGN 124
Query: 142 KSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECG 201
KSDL D R V E+A EFA + GL F EASA G+NV+ AF ++IY + + LE
Sbjct: 125 KSDLEDQRDVPTEEAREFAREHGLHFCEASAKTGENVEDAFLETAKQIYQKIQEGSLEL- 183
Query: 202 NGKVDGPPMLAGSKIDVISGADLEISEMKKLSTCSC 237
D + + I+ +D + K CSC
Sbjct: 184 -NAADSGVQTRSQRSNQINSSDEPQTPQDK--NCSC 216
>gi|13537449|dbj|BAB40679.1| small GTPase Rab11C [Entamoeba histolytica]
Length = 212
Score = 196 bits (497), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 92/163 (56%), Positives = 120/163 (73%)
Query: 28 VFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTAGQ 87
++K+V+IG+S VGKS +L RFT+NEF + K TIGVEF TRT+ GK I+AQIWDTAGQ
Sbjct: 8 MYKLVIIGESGVGKSNLLLRFTRNEFEPEKKFTIGVEFATRTIEYEGKTIRAQIWDTAGQ 67
Query: 88 ERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDLVD 147
E+YRA+T AYYRGA GA+ VYD++K+ SFD + RW+ EL+ DS I I+++GNK+DL
Sbjct: 68 EKYRAITDAYYRGAEGAMCVYDVSKKDSFDAIERWMNELKNGRDSDITIMIVGNKADLKQ 127
Query: 148 MRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIY 190
R V+ D EFA+ FF E SAL+G NV+ AF LL +IY
Sbjct: 128 EREVNTSDGTEFAQKHSAFFIETSALDGTNVEKAFSDLLIQIY 170
>gi|117939087|dbj|BAF36697.1| Small G Protein RAB [Symbiotic protist of Reticulitermes speratus]
Length = 198
Score = 195 bits (496), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 104/211 (49%), Positives = 141/211 (66%), Gaps = 17/211 (8%)
Query: 31 VVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTAGQERY 90
+V+IGDS VGKS +L R+TK EF +SKSTIGVEF T+T+ + K IKAQIWDTAGQ+RY
Sbjct: 1 IVLIGDSGVGKSNLLLRYTKIEFNLESKSTIGVEFATKTIQYDNKNIKAQIWDTAGQDRY 60
Query: 91 RAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDLVDMRA 150
RAVTSAYYRGA+GA++VYD++K +++ V +W++ELR AD +I I+L+GNKSDL +R
Sbjct: 61 RAVTSAYYRGAVGALLVYDVSKHSTYEGVDKWLKELRDQADPAIVIMLVGNKSDLRHLRN 120
Query: 151 VSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKK----ELECGNGKVD 206
V E+A FA+ L F E SA + NV+ AF +LQEIY V + E++ K +
Sbjct: 121 VPTEEAKSFAQRNNLSFIETSAQSSTNVEAAFNTILQEIYKNVVRNTAPAEVDSKGKKPE 180
Query: 207 GPPMLAGSKIDVISGADLEISEMKKLSTCSC 237
G G +DV SG + + C+C
Sbjct: 181 G-----GVVVDVTSGGEKK--------PCAC 198
>gi|426379449|ref|XP_004056410.1| PREDICTED: ras-related protein Rab-11A isoform 2 [Gorilla gorilla
gorilla]
Length = 198
Score = 195 bits (496), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 89/132 (67%), Positives = 114/132 (86%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIW
Sbjct: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI K ++++V RW++ELR HADS+I I+L+GNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNK 125
Query: 143 SDLVDMRAVSAE 154
SDL +RAV +
Sbjct: 126 SDLRHLRAVPTD 137
>gi|47212961|emb|CAF93372.1| unnamed protein product [Tetraodon nigroviridis]
Length = 170
Score = 194 bits (494), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 93/166 (56%), Positives = 124/166 (74%), Gaps = 2/166 (1%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D ++V+KVV+IG+S VGKS +LSRFTKNEF DS++TIGVEF TRTV +N +KAQIW
Sbjct: 5 DSYNFVYKVVLIGESGVGKSNLLSRFTKNEFNHDSRTTIGVEFSTRTVQLNQYTVKAQIW 64
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAG ERYRA+TSAYYRGA+GA++VYDI+K +++ RW++EL HAD I ++L+GNK
Sbjct: 65 DTAGLERYRAITSAYYRGAVGALLVYDISKHLTYESTERWLKELYEHADPHIVVMLVGNK 124
Query: 143 SDLVDMRAVSAEDAVEF--AEDQGLFFSEASALNGDNVDTAFFRLL 186
DL ++R V +E +E +GL F E SAL+ NV+ AF +L
Sbjct: 125 RDLENLRTVPSEGGPGLCRSEAKGLMFMETSALDSTNVEAAFNEVL 170
>gi|428175915|gb|EKX44802.1| hypothetical protein GUITHDRAFT_94864 [Guillardia theta CCMP2712]
Length = 210
Score = 194 bits (492), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 91/176 (51%), Positives = 122/176 (69%)
Query: 24 KIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWD 83
+ +Y+FK ++IGD VGKS +L +FT+ F D TIG+EF TR +NGK+IK QIWD
Sbjct: 3 QFEYIFKYIIIGDMGVGKSCLLQQFTEKRFPEDQPHTIGIEFGTRVCEVNGKVIKLQIWD 62
Query: 84 TAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKS 143
TAGQER+RAVT +YYRGA GA++VYDIT R SF+H+A W+ + R H + S ++LIGNK
Sbjct: 63 TAGQERFRAVTRSYYRGAAGAIMVYDITTRSSFNHLATWLTDARNHTNPSTVMMLIGNKL 122
Query: 144 DLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELE 199
D+ R VS E+A FA+D GL + EASA G NV+ AF R ++IY + L+
Sbjct: 123 DMAKQREVSFEEADAFAKDNGLIYLEASAKTGQNVEEAFLRTARKIYENIQSGALD 178
>gi|70937938|ref|XP_739710.1| small GTPase Rab11 [Plasmodium chabaudi chabaudi]
gi|56516907|emb|CAH87623.1| small GTPase Rab11, putative [Plasmodium chabaudi chabaudi]
Length = 202
Score = 194 bits (492), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 100/192 (52%), Positives = 134/192 (69%), Gaps = 6/192 (3%)
Query: 47 RFTKNEFFFDSKSTIGVEFQTRTVTI-NGKIIKAQIWDTAGQERYRAVTSAYYRGALGAV 105
RFT++EF +SKSTIGVEF T+++ + N KIIKAQIWDTAGQERYRA+TSAYYRGA+GA+
Sbjct: 16 RFTRDEFNLESKSTIGVEFATKSIQLKNDKIIKAQIWDTAGQERYRAITSAYYRGAVGAL 75
Query: 106 VVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDLVDMRAVSAEDAVEFAEDQGL 165
+VYDITK+ +F+++ +W++ELR +ADS+I I+L+GNKSDL +R ++ DA +FA+ + L
Sbjct: 76 LVYDITKKNTFENIEKWLKELRDNADSNIVILLVGNKSDLKHLRVINDNDATQFAKKEKL 135
Query: 166 FFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNGKVDGPPMLAGSKIDVISGADLE 225
F E SAL NV+ AF +LL EIY KK+ V+ P G KI+V D
Sbjct: 136 AFIETSALEATNVELAFHQLLNEIYNVRQKKQATKSEDNVNIQPR--GKKINVDDDND-- 191
Query: 226 ISEMKKLSTCSC 237
KK T C
Sbjct: 192 -ENEKKPKTKCC 202
>gi|258571595|ref|XP_002544601.1| GTP-binding protein ypt3 [Uncinocarpus reesii 1704]
gi|237904871|gb|EEP79272.1| GTP-binding protein ypt3 [Uncinocarpus reesii 1704]
Length = 203
Score = 193 bits (491), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 87/132 (65%), Positives = 115/132 (87%)
Query: 30 KVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTAGQER 89
++V+IGDS VGKS +LSRFT+NEF DSKSTIGVEF TR++ ++ K IK+QIWDTAGQER
Sbjct: 31 EIVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKSQIWDTAGQER 90
Query: 90 YRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDLVDMR 149
YRA+TSAYYRGA+GA++VYDI+K Q++++V RW++ELR HADS+I I+L+GNKSDL +R
Sbjct: 91 YRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADSNIVIMLVGNKSDLRHLR 150
Query: 150 AVSAEDAVEFAE 161
AV E+A +FA+
Sbjct: 151 AVPTEEAKQFAK 162
>gi|431892315|gb|ELK02755.1| Ras-related protein Rab-25 [Pteropus alecto]
Length = 190
Score = 193 bits (491), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 94/180 (52%), Positives = 130/180 (72%), Gaps = 4/180 (2%)
Query: 12 HRHQQQENMIPDKIDYVFK----VVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQT 67
H+ ++ DK F+ VV+IG+S VGK+ +LSRFT+NEF DS++TIGVEF T
Sbjct: 10 HKGSTNPSLSDDKALSTFEAHGWVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFST 69
Query: 68 RTVTINGKIIKAQIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELR 127
RTV + +KAQIWDTAG ERYRA+TSAYYRGA+GA++V+D+TK Q++ V RW++EL
Sbjct: 70 RTVMLGTAAVKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYSVVERWLKELY 129
Query: 128 AHADSSIRIILIGNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQ 187
HA+++I ++L+GNKSDL R V ++A FAE+ GL F E SAL+ NV+ AF +L+
Sbjct: 130 DHAEATIVVMLVGNKSDLSQAREVPTDEARMFAENNGLLFLETSALDSTNVELAFETVLK 189
>gi|322694053|gb|EFY85893.1| GTP-binding protein ypt3 [Metarhizium acridum CQMa 102]
Length = 264
Score = 192 bits (488), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 91/165 (55%), Positives = 122/165 (73%)
Query: 22 PDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQI 81
P +D + + IG + SRFT+NEF DSKSTIGVEF TR++ ++ K IKAQI
Sbjct: 13 PLPLDIAAQSLTIGALPPVTVPLQSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQI 72
Query: 82 WDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGN 141
WDTAGQERYRA+TSAYYRGA+GA++VYDI+K Q++++V RW++ELR HAD++I I+L+GN
Sbjct: 73 WDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVGN 132
Query: 142 KSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLL 186
KSDL +RAV ++A FA + L F E SAL+ NV+ AF +L
Sbjct: 133 KSDLRHLRAVPTDEAKSFASENHLSFIETSALDASNVELAFQNIL 177
>gi|145501753|ref|XP_001436857.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834211|emb|CAI44483.1| rab_C72 [Paramecium tetraurelia]
gi|124404001|emb|CAK69460.1| unnamed protein product [Paramecium tetraurelia]
Length = 219
Score = 192 bits (487), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 86/175 (49%), Positives = 126/175 (72%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
++ D++FK+++IGDS VGK+ IL RF KNEF DSK TIGVEF T+T+ + K +K QIW
Sbjct: 7 NEYDFLFKIILIGDSGVGKTNILQRFVKNEFILDSKPTIGVEFSTKTINVENKSVKCQIW 66
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+T+AYYRGA+GA V YDIT+ +F ++ +W+ E++ +A +I I++IGNK
Sbjct: 67 DTAGQERYRAITNAYYRGAVGAFVCYDITREITFTNIEKWLSEIKEYAPKNIVIMMIGNK 126
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKE 197
D + R V + +A + + + + E SA NG NV+ AF L+ EI+ ++S K+
Sbjct: 127 IDQANDRMVRSVEAAKLCQQNKIGYIETSAQNGLNVEEAFSNLVSEIFSSMSSKQ 181
>gi|195474015|ref|XP_002089287.1| GE19031 [Drosophila yakuba]
gi|194175388|gb|EDW88999.1| GE19031 [Drosophila yakuba]
Length = 239
Score = 190 bits (483), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 92/194 (47%), Positives = 131/194 (67%), Gaps = 2/194 (1%)
Query: 8 DATDHRHQQQENMI--PDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEF 65
D D+ ++ NM P +Y+FK ++IGD VGKS +L +FT+ +F + TIGVEF
Sbjct: 13 DRIDYFMEKCPNMTAAPYNYNYIFKYIIIGDMGVGKSCLLHQFTEKKFMANCPHTIGVEF 72
Query: 66 QTRTVTINGKIIKAQIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEE 125
TR + ++ K IK QIWDTAGQER+RAVT +YYRGA GA++VYDIT+R +++H++ W+ +
Sbjct: 73 GTRIIEVDDKKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTD 132
Query: 126 LRAHADSSIRIILIGNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRL 185
R + S I LIGNKSDL R V+ E+A EFA++ GL F EASA+ G NV+ AF
Sbjct: 133 TRNLTNPSTVIFLIGNKSDLESTREVTYEEAKEFADENGLMFLEASAMTGQNVEEAFLET 192
Query: 186 LQEIYGAVSKKELE 199
++IY + + L+
Sbjct: 193 ARKIYQNIQEGRLD 206
>gi|46193751|emb|CAG25544.1| putative Ras-related GTP-binding protein [Cucumis sativus]
Length = 203
Score = 190 bits (482), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 89/168 (52%), Positives = 121/168 (72%)
Query: 32 VVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTAGQERYR 91
V+ GDS VGKS +LSRF+KNEF FDS+ TIGVEF R + + K++K QIWDTAGQER+R
Sbjct: 1 VLTGDSGVGKSNLLSRFSKNEFRFDSRPTIGVEFAYRNIKVADKLVKTQIWDTAGQERFR 60
Query: 92 AVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDLVDMRAV 151
A+TS+YYRGALGA++VYDIT+ +FD++ +W+ ELR + + IIL+GNK DL R V
Sbjct: 61 AITSSYYRGALGALLVYDITRVATFDNIKKWLRELREFGNPEMVIILVGNKCDLHQSREV 120
Query: 152 SAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELE 199
E+A AE + LFF E SA + NV+ AF +++ I+ S+K L+
Sbjct: 121 QEEEARHLAELENLFFMETSAKDNLNVEEAFLEMVRRIHAIASQKTLD 168
>gi|237820631|ref|NP_001153783.1| Rab-protein 14 [Tribolium castaneum]
Length = 215
Score = 189 bits (481), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 89/178 (50%), Positives = 123/178 (69%)
Query: 22 PDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQI 81
P Y+FK ++IGD VGKS +L +FT+ +F D TIGVEF TR + ++G+ IK QI
Sbjct: 5 PYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQI 64
Query: 82 WDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGN 141
WDTAGQER+RAVT +YYRGA GA++VYDIT+R +++H++ W+ + R + S I LIGN
Sbjct: 65 WDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTRNLTNPSTVIFLIGN 124
Query: 142 KSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELE 199
K DL R V+ E+A +FAE+ GL F EASA GDNV+ AF ++IY ++ L+
Sbjct: 125 KCDLEGQRDVTYEEASKFAEENGLMFVEASAKTGDNVEEAFLETAKKIYQSIQDGRLD 182
>gi|253742611|gb|EES99410.1| Rab11 [Giardia intestinalis ATCC 50581]
Length = 216
Score = 189 bits (481), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 93/175 (53%), Positives = 130/175 (74%), Gaps = 6/175 (3%)
Query: 21 IPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTI--NGKII- 77
+ D D+++K+++IGDSAVGKS ILSRFT N+F S +TIGVEF T+T+T+ GK+I
Sbjct: 1 MTDAYDHLYKLILIGDSAVGKSNILSRFTSNKFNASSAATIGVEFTTKTLTVEVQGKMIS 60
Query: 78 -KAQIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELR-AHADSS-I 134
+ Q WDTAGQERYR++TS+YYRGA G ++V+D+TKR SF+H W+ ELR A A+S+
Sbjct: 61 TRLQCWDTAGQERYRSITSSYYRGAHGCLLVFDVTKRTSFEHCTEWLTELRNASANSTAC 120
Query: 135 RIILIGNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEI 189
++IL+GNK DL +R V+ E+A FA+ QGL + E SA +G +D AF RL+ E+
Sbjct: 121 KVILVGNKVDLRHLREVTTEEATAFAQQQGLSYIETSASSGHGIDDAFKRLVTEL 175
>gi|195436943|ref|XP_002066405.1| GK18273 [Drosophila willistoni]
gi|194162490|gb|EDW77391.1| GK18273 [Drosophila willistoni]
Length = 243
Score = 189 bits (481), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 88/178 (49%), Positives = 124/178 (69%)
Query: 22 PDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQI 81
P +Y+FK ++IGD VGKS +L +FT+ +F + TIGVEF TR + ++ K IK QI
Sbjct: 33 PYNYNYIFKYIIIGDMGVGKSCLLHQFTEKKFMANCPHTIGVEFGTRIIEVDDKKIKLQI 92
Query: 82 WDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGN 141
WDTAGQER+RAVT +YYRGA GA++VYDIT+R +++H++ W+ + R + S I LIGN
Sbjct: 93 WDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTRNLTNPSTVIFLIGN 152
Query: 142 KSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELE 199
KSDL R V+ E+A EFA++ GL F EASA+ G NV+ AF ++IY + + L+
Sbjct: 153 KSDLESTREVTYEEAKEFADENGLMFLEASAMTGQNVEEAFLETARKIYQNIQEGRLD 210
>gi|195115754|ref|XP_002002421.1| GI12880 [Drosophila mojavensis]
gi|193912996|gb|EDW11863.1| GI12880 [Drosophila mojavensis]
Length = 243
Score = 189 bits (480), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 88/178 (49%), Positives = 124/178 (69%)
Query: 22 PDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQI 81
P +Y+FK ++IGD VGKS +L +FT+ +F + TIGVEF TR + ++ K IK QI
Sbjct: 33 PYNYNYIFKYIIIGDMGVGKSCLLHQFTEKKFMANCPHTIGVEFGTRIIEVDDKKIKLQI 92
Query: 82 WDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGN 141
WDTAGQER+RAVT +YYRGA GA++VYDIT+R +++H++ W+ + R + S I LIGN
Sbjct: 93 WDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTRNLTNPSTVIFLIGN 152
Query: 142 KSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELE 199
KSDL R V+ E+A EFA++ GL F EASA+ G NV+ AF ++IY + + L+
Sbjct: 153 KSDLESTREVTYEEAKEFADENGLMFLEASAMTGQNVEEAFLETARKIYQNIQEGRLD 210
>gi|195164876|ref|XP_002023272.1| GL21269 [Drosophila persimilis]
gi|198473182|ref|XP_001356197.2| GA18036 [Drosophila pseudoobscura pseudoobscura]
gi|194105357|gb|EDW27400.1| GL21269 [Drosophila persimilis]
gi|198139340|gb|EAL33257.2| GA18036 [Drosophila pseudoobscura pseudoobscura]
Length = 239
Score = 189 bits (480), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 88/178 (49%), Positives = 124/178 (69%)
Query: 22 PDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQI 81
P +Y+FK ++IGD VGKS +L +FT+ +F + TIGVEF TR + ++ K IK QI
Sbjct: 29 PYNYNYIFKYIIIGDMGVGKSCLLHQFTEKKFMANCPHTIGVEFGTRIIEVDDKKIKLQI 88
Query: 82 WDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGN 141
WDTAGQER+RAVT +YYRGA GA++VYDIT+R +++H++ W+ + R + S I LIGN
Sbjct: 89 WDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTRNLTNPSTVIFLIGN 148
Query: 142 KSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELE 199
KSDL R V+ E+A EFA++ GL F EASA+ G NV+ AF ++IY + + L+
Sbjct: 149 KSDLESTREVTYEEAKEFADENGLMFLEASAMTGQNVEEAFLETARKIYQNIQEGRLD 206
>gi|28574179|ref|NP_788057.1| Rab14, isoform C [Drosophila melanogaster]
gi|28380367|gb|AAO41194.1| Rab14, isoform C [Drosophila melanogaster]
gi|157816819|gb|ABV82401.1| RH10422p [Drosophila melanogaster]
Length = 233
Score = 189 bits (480), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 88/178 (49%), Positives = 124/178 (69%)
Query: 22 PDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQI 81
P +Y+FK ++IGD VGKS +L +FT+ +F + TIGVEF TR + ++ K IK QI
Sbjct: 23 PYNYNYIFKYIIIGDMGVGKSCLLHQFTEKKFMANCPHTIGVEFGTRIIEVDDKKIKLQI 82
Query: 82 WDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGN 141
WDTAGQER+RAVT +YYRGA GA++VYDIT+R +++H++ W+ + R + S I LIGN
Sbjct: 83 WDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTRNLTNPSTVIFLIGN 142
Query: 142 KSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELE 199
KSDL R V+ E+A EFA++ GL F EASA+ G NV+ AF ++IY + + L+
Sbjct: 143 KSDLESTREVTYEEAKEFADENGLMFLEASAMTGQNVEEAFLETARKIYQNIQEGRLD 200
>gi|195397826|ref|XP_002057529.1| GJ18183 [Drosophila virilis]
gi|194141183|gb|EDW57602.1| GJ18183 [Drosophila virilis]
Length = 236
Score = 189 bits (480), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 88/178 (49%), Positives = 124/178 (69%)
Query: 22 PDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQI 81
P +Y+FK ++IGD VGKS +L +FT+ +F + TIGVEF TR + ++ K IK QI
Sbjct: 26 PYNYNYIFKYIIIGDMGVGKSCLLHQFTEKKFMANCPHTIGVEFGTRIIEVDDKKIKLQI 85
Query: 82 WDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGN 141
WDTAGQER+RAVT +YYRGA GA++VYDIT+R +++H++ W+ + R + S I LIGN
Sbjct: 86 WDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTRNLTNPSTVIFLIGN 145
Query: 142 KSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELE 199
KSDL R V+ E+A EFA++ GL F EASA+ G NV+ AF ++IY + + L+
Sbjct: 146 KSDLESTREVTYEEAKEFADENGLMFLEASAMTGQNVEEAFLETARKIYQNIQEGRLD 203
>gi|294898858|ref|XP_002776410.1| Rab11b, putative [Perkinsus marinus ATCC 50983]
gi|239883348|gb|EER08226.1| Rab11b, putative [Perkinsus marinus ATCC 50983]
Length = 220
Score = 189 bits (480), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 93/182 (51%), Positives = 132/182 (72%), Gaps = 5/182 (2%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTIN-GKIIKAQI 81
D+ D+++K+V++GD+ VGK+ +LSR+ K +TIGVEF TRTV + G +KAQI
Sbjct: 3 DEYDHLYKIVLVGDATVGKTHLLSRYIKGTLPRAPTATIGVEFATRTVPLAVGGTVKAQI 62
Query: 82 WDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGN 141
WDTAGQERYRA+TSA+YR A+GA++VYD+T+R +F + ++W+EELR +A+ I I+L+GN
Sbjct: 63 WDTAGQERYRAITSAHYRRAVGALLVYDVTRRNTFLNCSKWMEELRQNAEPDIVILLVGN 122
Query: 142 KSDLVD----MRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKE 197
K DLV+ R V+ E+A FA+ GLFF+EASA++ NV F LLQEIY S+ +
Sbjct: 123 KIDLVEKDSSTRQVTTEEATVFAKQSGLFFAEASAVSSVNVKFIFENLLQEIYNQRSRAQ 182
Query: 198 LE 199
E
Sbjct: 183 AE 184
>gi|195033809|ref|XP_001988767.1| GH11344 [Drosophila grimshawi]
gi|193904767|gb|EDW03634.1| GH11344 [Drosophila grimshawi]
Length = 243
Score = 189 bits (479), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 88/178 (49%), Positives = 124/178 (69%)
Query: 22 PDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQI 81
P +Y+FK ++IGD VGKS +L +FT+ +F + TIGVEF TR + ++ K IK QI
Sbjct: 33 PYNYNYIFKYIIIGDMGVGKSCLLHQFTEKKFMANCPHTIGVEFGTRIIEVDDKKIKLQI 92
Query: 82 WDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGN 141
WDTAGQER+RAVT +YYRGA GA++VYDIT+R +++H++ W+ + R + S I LIGN
Sbjct: 93 WDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTRNLTNPSTVIFLIGN 152
Query: 142 KSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELE 199
KSDL R V+ E+A EFA++ GL F EASA+ G NV+ AF ++IY + + L+
Sbjct: 153 KSDLESTREVTYEEAKEFADENGLMFLEASAMTGQNVEEAFLETARKIYQNIQEGRLD 210
>gi|194758573|ref|XP_001961536.1| GF14883 [Drosophila ananassae]
gi|190615233|gb|EDV30757.1| GF14883 [Drosophila ananassae]
Length = 239
Score = 189 bits (479), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 88/178 (49%), Positives = 124/178 (69%)
Query: 22 PDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQI 81
P +Y+FK ++IGD VGKS +L +FT+ +F + TIGVEF TR + ++ K IK QI
Sbjct: 29 PYNYNYIFKYIIIGDMGVGKSCLLHQFTEKKFMANCPHTIGVEFGTRIIEVDDKKIKLQI 88
Query: 82 WDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGN 141
WDTAGQER+RAVT +YYRGA GA++VYDIT+R +++H++ W+ + R + S I LIGN
Sbjct: 89 WDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTRNLTNPSTVIFLIGN 148
Query: 142 KSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELE 199
KSDL R V+ E+A EFA++ GL F EASA+ G NV+ AF ++IY + + L+
Sbjct: 149 KSDLESTREVTYEEAKEFADENGLMFLEASAMTGQNVEEAFLETARKIYQNIQEGRLD 206
>gi|407404146|gb|EKF29737.1| hypothetical protein MOQ_006467 [Trypanosoma cruzi marinkellei]
Length = 211
Score = 189 bits (479), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 96/211 (45%), Positives = 133/211 (63%), Gaps = 4/211 (1%)
Query: 27 YVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTAG 86
Y+FK ++IGD VGKS ++ RFT+ F D TIGVEF T TV ING+ +K QIWDTAG
Sbjct: 5 YIFKYIIIGDMGVGKSCLMQRFTEQRFRNDLPHTIGVEFGTITVDINGETVKLQIWDTAG 64
Query: 87 QERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDLV 146
QER+R+VT YYRGA GA++VYD+++R++F + W+++ R + + ++L+GNKSDL
Sbjct: 65 QERFRSVTRGYYRGAAGALLVYDVSRRETFSRIGTWLQDARGNTNPHTVMMLVGNKSDLD 124
Query: 147 DMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNGKVD 206
+ R VS E+AV+FA++ L F E SALNGDNV+ AF +I+ V L G D
Sbjct: 125 ESREVSYEEAVKFADENNLLFVECSALNGDNVEQAFLSTAHKIHEKVMCGILNPG----D 180
Query: 207 GPPMLAGSKIDVISGADLEISEMKKLSTCSC 237
+ + + D E K STCSC
Sbjct: 181 PESGVQLHTATLPNAGDSTKRERKGESTCSC 211
>gi|28574177|ref|NP_788056.1| Rab14, isoform B [Drosophila melanogaster]
gi|195338419|ref|XP_002035822.1| GM15560 [Drosophila sechellia]
gi|28380366|gb|AAO41193.1| Rab14, isoform B [Drosophila melanogaster]
gi|194129702|gb|EDW51745.1| GM15560 [Drosophila sechellia]
Length = 239
Score = 189 bits (479), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 88/178 (49%), Positives = 124/178 (69%)
Query: 22 PDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQI 81
P +Y+FK ++IGD VGKS +L +FT+ +F + TIGVEF TR + ++ K IK QI
Sbjct: 29 PYNYNYIFKYIIIGDMGVGKSCLLHQFTEKKFMANCPHTIGVEFGTRIIEVDDKKIKLQI 88
Query: 82 WDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGN 141
WDTAGQER+RAVT +YYRGA GA++VYDIT+R +++H++ W+ + R + S I LIGN
Sbjct: 89 WDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTRNLTNPSTVIFLIGN 148
Query: 142 KSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELE 199
KSDL R V+ E+A EFA++ GL F EASA+ G NV+ AF ++IY + + L+
Sbjct: 149 KSDLESTREVTYEEAKEFADENGLMFLEASAMTGQNVEEAFLETARKIYQNIQEGRLD 206
>gi|17137218|ref|NP_477171.1| Rab14, isoform A [Drosophila melanogaster]
gi|2313041|dbj|BAA21709.1| rab14 [Drosophila melanogaster]
gi|7298153|gb|AAF53390.1| Rab14, isoform A [Drosophila melanogaster]
gi|297591874|gb|ADI46814.1| MIP20481p [Drosophila melanogaster]
Length = 215
Score = 189 bits (479), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 88/178 (49%), Positives = 124/178 (69%)
Query: 22 PDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQI 81
P +Y+FK ++IGD VGKS +L +FT+ +F + TIGVEF TR + ++ K IK QI
Sbjct: 5 PYNYNYIFKYIIIGDMGVGKSCLLHQFTEKKFMANCPHTIGVEFGTRIIEVDDKKIKLQI 64
Query: 82 WDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGN 141
WDTAGQER+RAVT +YYRGA GA++VYDIT+R +++H++ W+ + R + S I LIGN
Sbjct: 65 WDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTRNLTNPSTVIFLIGN 124
Query: 142 KSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELE 199
KSDL R V+ E+A EFA++ GL F EASA+ G NV+ AF ++IY + + L+
Sbjct: 125 KSDLESTREVTYEEAKEFADENGLMFLEASAMTGQNVEEAFLETARKIYQNIQEGRLD 182
>gi|225452278|ref|XP_002270701.1| PREDICTED: ras-related protein RABB1b [Vitis vinifera]
gi|296087576|emb|CBI34832.3| unnamed protein product [Vitis vinifera]
Length = 209
Score = 188 bits (478), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 95/192 (49%), Positives = 129/192 (67%), Gaps = 9/192 (4%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
DY+FK ++IGD+ VGKS +L +FT F TIGVEF R VTI+G+ IK QIWDTA
Sbjct: 4 DYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTA 63
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQE +R++T +YYRGA GA++VYDIT+R++F+H+A W+E+ R HA+ ++ I+LIGNK DL
Sbjct: 64 GQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMTIMLIGNKCDL 123
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFF----RLLQEIYGAV-----SKK 196
RAVS E+ +FA++ GL F EASA NV+ AF R+LQ I V
Sbjct: 124 AHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAARILQNIQEGVFDLSNESS 183
Query: 197 ELECGNGKVDGP 208
++ G G+ GP
Sbjct: 184 GIKVGYGRPQGP 195
>gi|300174998|emb|CBK20309.2| unnamed protein product [Blastocystis hominis]
Length = 183
Score = 188 bits (477), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 88/161 (54%), Positives = 118/161 (73%)
Query: 29 FKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTAGQE 88
F VV+IGDS VGK+ ILSRF +EF DSK+T+GVEF + V +N IIKAQIWDTAGQE
Sbjct: 18 FVVVLIGDSNVGKTNILSRFANDEFNLDSKATVGVEFSAKCVKVNNSIIKAQIWDTAGQE 77
Query: 89 RYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDLVDM 148
RYR++TSAYYRGA+GA++VYDIT R SF++V W+ ELR H+D + ++LIGNK DL +
Sbjct: 78 RYRSITSAYYRGAVGALMVYDITSRSSFENVEGWLSELRQHSDGDMVVVLIGNKCDLANQ 137
Query: 149 RAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEI 189
R++S ++A +AE + F E SA +D AF +L+ +
Sbjct: 138 RSISTDEARAYAEKHNMAFIETSAYERTGIDEAFTMVLKRL 178
>gi|156390648|ref|XP_001635382.1| predicted protein [Nematostella vectensis]
gi|156222475|gb|EDO43319.1| predicted protein [Nematostella vectensis]
Length = 217
Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 95/219 (43%), Positives = 136/219 (62%), Gaps = 10/219 (4%)
Query: 22 PDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQI 81
P Y+FK ++IGD VGKS +L +FT+ +F D TIGVEF TR + ++G+ IK QI
Sbjct: 6 PYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQI 65
Query: 82 WDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGN 141
WDTAGQER+RAVT +YYRGA GA++VYDIT+R +++H++ W+ + R + + I LIGN
Sbjct: 66 WDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIFLIGN 125
Query: 142 KSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECG 201
KSDL R V+ E+A +FAE+ GL F EASA G+NV+ AF ++IY +
Sbjct: 126 KSDLDAQRDVTYEEAKQFAEENGLLFCEASAKTGENVEDAFLETAKKIYQNIQ------- 178
Query: 202 NGKVDGPPMLAGSKIDVISGAD---LEISEMKKLSTCSC 237
+G +D +G + ++G L + CSC
Sbjct: 179 DGSLDLNAAESGVQHKPLTGRPQNALNTDQQPNQDKCSC 217
>gi|159117346|ref|XP_001708893.1| Rab11 [Giardia lamblia ATCC 50803]
gi|28628539|gb|AAO49245.1|AF460175_1 GTPase Rab11-like protein [Giardia intestinalis]
gi|157437007|gb|EDO81219.1| Rab11 [Giardia lamblia ATCC 50803]
Length = 216
Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 92/175 (52%), Positives = 130/175 (74%), Gaps = 6/175 (3%)
Query: 21 IPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTI--NGKII- 77
+ D D+++K+++IGDSAVGKS ILSRFT N+F S +TIGVEF T+T+T+ GK+I
Sbjct: 1 MTDAYDHLYKLILIGDSAVGKSNILSRFTSNKFNASSAATIGVEFTTKTLTVEVQGKMIS 60
Query: 78 -KAQIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELR-AHADSS-I 134
+ Q WDTAGQERYR++TS+YYRGA G ++V+D+TKR SF+H W+ ELR A A+S+
Sbjct: 61 TRLQCWDTAGQERYRSITSSYYRGAHGCLLVFDVTKRTSFEHCTEWLTELRNASANSTAC 120
Query: 135 RIILIGNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEI 189
++IL+GNK DL +R V+ E+A FA+ QGL + E SA +G +D AF +L+ E+
Sbjct: 121 KVILVGNKVDLRHLREVTTEEATAFAQQQGLSYIETSASSGHGIDDAFKQLVTEL 175
>gi|440911197|gb|ELR60903.1| Ras-related protein Rab-14, partial [Bos grunniens mutus]
Length = 218
Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 88/178 (49%), Positives = 124/178 (69%)
Query: 22 PDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQI 81
P Y+FK ++IGD VGKS +L +FT+ +F D TIGVEF TR + ++G+ IK QI
Sbjct: 8 PYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQI 67
Query: 82 WDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGN 141
WDTAGQER+RAVT +YYRGA GA++VYDIT+R +++H++ W+ + R + + IILIGN
Sbjct: 68 WDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGN 127
Query: 142 KSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELE 199
K+DL R V+ E+A +FAE+ GL F EASA G+NV+ AF ++IY + L+
Sbjct: 128 KADLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQNIQDGSLD 185
>gi|193211445|ref|NP_001123226.1| Rab-protein 14 [Nasonia vitripennis]
Length = 218
Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 88/178 (49%), Positives = 124/178 (69%)
Query: 22 PDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQI 81
P Y+FK ++IGD VGKS +L +FT+ +F D TIGVEF TR + + G+ IK QI
Sbjct: 5 PYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVAGQKIKLQI 64
Query: 82 WDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGN 141
WDTAGQER+RAVT +YYRGA GA++VYDIT+R +++H++ W+ + R + S I LIGN
Sbjct: 65 WDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTRNLTNPSTVIFLIGN 124
Query: 142 KSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELE 199
KSDL + R V+ E+A +FA++ GL F EASA GDNV+ AF ++I+ ++ L+
Sbjct: 125 KSDLDEQRDVTYEEAKQFADENGLMFVEASAKTGDNVEEAFLETAKKIFQSIQDGRLD 182
>gi|302142935|emb|CBI20230.3| unnamed protein product [Vitis vinifera]
Length = 204
Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 89/157 (56%), Positives = 118/157 (75%)
Query: 52 EFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTAGQERYRAVTSAYYRGALGAVVVYDIT 111
+F +SKSTIGVEF TR++ ++ KI+KAQIWDTAGQERYRA+TSAYYRGA+GA++VYD+T
Sbjct: 15 KFSLESKSTIGVEFATRSIRVDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVT 74
Query: 112 KRQSFDHVARWVEELRAHADSSIRIILIGNKSDLVDMRAVSAEDAVEFAEDQGLFFSEAS 171
+ +F++V RW++ELR H DS I I+L+GNK DL +RAVS +DA FAE + FF E S
Sbjct: 75 RHVTFENVERWLKELRDHTDSHIVIMLVGNKGDLRHLRAVSIDDAKAFAERENTFFMETS 134
Query: 172 ALNGDNVDTAFFRLLQEIYGAVSKKELECGNGKVDGP 208
AL NV+ AF +L +IY VS+K L+ G+ P
Sbjct: 135 ALESMNVENAFTEVLTQIYQVVSRKALDIGDDPAALP 171
>gi|195579198|ref|XP_002079449.1| GD23961 [Drosophila simulans]
gi|194191458|gb|EDX05034.1| GD23961 [Drosophila simulans]
Length = 239
Score = 187 bits (476), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 91/191 (47%), Positives = 130/191 (68%), Gaps = 2/191 (1%)
Query: 11 DHRHQQQENMI--PDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTR 68
D+ ++ NMI P +Y+FK ++IGD VGKS + +FT+ +F + TIGVEF TR
Sbjct: 16 DYFIEKCPNMIEAPYNYNYIFKYIIIGDMGVGKSCLRHQFTEKKFMANCPHTIGVEFGTR 75
Query: 69 TVTINGKIIKAQIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRA 128
+ ++ K IK QIWDTAGQER+RAVT +YYRGA GA++VYDIT+R +++H++ W+ + R
Sbjct: 76 IIEVDDKKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTRN 135
Query: 129 HADSSIRIILIGNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQE 188
+ S I LIGNKSDL R V+ E+A EFA++ GL F EASA+ G NV+ AF ++
Sbjct: 136 LTNPSTVIFLIGNKSDLESTREVTYEEAKEFADENGLMFLEASAMTGQNVEEAFLETARK 195
Query: 189 IYGAVSKKELE 199
IY + + L+
Sbjct: 196 IYQNIQEGRLD 206
>gi|213512047|ref|NP_001133753.1| ras-related protein Rab-14 [Salmo salar]
gi|209155216|gb|ACI33840.1| Ras-related protein Rab-14 [Salmo salar]
Length = 215
Score = 187 bits (475), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 88/178 (49%), Positives = 124/178 (69%)
Query: 22 PDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQI 81
P Y+FK ++IGD VGKS +L +FT+ +F D TIGVEF TR + ++G+ IK QI
Sbjct: 5 PYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQI 64
Query: 82 WDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGN 141
WDTAGQER+RAVT +YYRGA GA++VYDIT+R +++H++ W+ + R + + IILIGN
Sbjct: 65 WDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGN 124
Query: 142 KSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELE 199
K+DL R V+ E+A +FAE+ GL F EASA G+NV+ AF ++IY + L+
Sbjct: 125 KADLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQNIQDGSLD 182
>gi|410922212|ref|XP_003974577.1| PREDICTED: ras-related protein Rab-14-like [Takifugu rubripes]
Length = 215
Score = 187 bits (475), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 95/219 (43%), Positives = 136/219 (62%), Gaps = 11/219 (5%)
Query: 22 PDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQI 81
P Y+FK ++IGD VGKS +L +FT+ +F D TIGVEF TR + ++G+ +K QI
Sbjct: 5 PYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIMEVHGQKVKLQI 64
Query: 82 WDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGN 141
WDTAGQER+RAVT +YYRGA GA++VYDIT+R +++H++ W+ + R + + IILIGN
Sbjct: 65 WDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGN 124
Query: 142 KSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECG 201
K+DL R V+ E+A +FAE+ GL F EASA G+NV+ AF + IY + L+
Sbjct: 125 KADLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEEAFLEAAKRIYQNIQDGSLDLN 184
Query: 202 ---NGKVDGPPMLAGSKIDVISGADLEISEMKKLSTCSC 237
+G P G +++ + A E CSC
Sbjct: 185 AAESGVQHKPSAPQGGRLNADNQAPKE--------GCSC 215
>gi|291233885|ref|XP_002736881.1| PREDICTED: Ras-related protein Rab-11A-like, partial [Saccoglossus
kowalevskii]
Length = 145
Score = 187 bits (475), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 87/134 (64%), Positives = 113/134 (84%)
Query: 27 YVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTAG 86
+ F VV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIWDTAG
Sbjct: 1 FFFVVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAG 60
Query: 87 QERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDLV 146
QERYRA+TSAYYRGA+GA++VYDI K ++++V RW++ELR HAD++I I+L+GNKSDL
Sbjct: 61 QERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDLR 120
Query: 147 DMRAVSAEDAVEFA 160
+RAV ++A FA
Sbjct: 121 HLRAVPTDEAKAFA 134
>gi|16758368|ref|NP_446041.1| ras-related protein Rab-14 [Rattus norvegicus]
gi|72535182|ref|NP_001026953.1| ras-related protein Rab-14 [Sus scrofa]
gi|46577632|sp|P61107.3|RAB14_RAT RecName: Full=Ras-related protein Rab-14
gi|75060237|sp|Q52NJ6.3|RAB14_PIG RecName: Full=Ras-related protein Rab-14
gi|6002803|gb|AAF00150.1|AF152463_1 RAB14 protein [Homo sapiens]
gi|20379074|gb|AAM21097.1|AF498949_1 small GTP binding protein RAB14 [Homo sapiens]
gi|206535|gb|AAA41994.1| RAB14 [Rattus norvegicus]
gi|6625806|gb|AAF19400.1| GTPase Rab14 [Homo sapiens]
gi|62868634|gb|AAY17505.1| Ras-related protein Rab-14 [Sus scrofa]
gi|159906373|gb|ABX10875.1| RAB14 [Capra hircus]
Length = 215
Score = 187 bits (475), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 88/178 (49%), Positives = 124/178 (69%)
Query: 22 PDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQI 81
P Y+FK ++IGD VGKS +L +FT+ +F D TIGVEF TR + ++G+ IK QI
Sbjct: 5 PYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQI 64
Query: 82 WDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGN 141
WDTAGQER+RAVT +YYRGA GA++VYDIT+R +++H++ W+ + R + + IILIGN
Sbjct: 65 WDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGN 124
Query: 142 KSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELE 199
K+DL R V+ E+A +FAE+ GL F EASA G+NV+ AF ++IY + L+
Sbjct: 125 KADLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQNIQDGSLD 182
>gi|348532847|ref|XP_003453917.1| PREDICTED: ras-related protein Rab-14-like [Oreochromis niloticus]
Length = 215
Score = 187 bits (475), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 88/178 (49%), Positives = 124/178 (69%)
Query: 22 PDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQI 81
P Y+FK ++IGD VGKS +L +FT+ +F D TIGVEF TR + ++G+ IK QI
Sbjct: 5 PYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQI 64
Query: 82 WDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGN 141
WDTAGQER+RAVT +YYRGA GA++VYDIT+R +++H++ W+ + R + + IILIGN
Sbjct: 65 WDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGN 124
Query: 142 KSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELE 199
K+DL R V+ E+A +FAE+ GL F EASA G+NV+ AF ++IY + L+
Sbjct: 125 KADLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQNIQDGSLD 182
>gi|18390323|ref|NP_080973.1| ras-related protein Rab-14 [Mus musculus]
gi|19923483|ref|NP_057406.2| ras-related protein Rab-14 [Homo sapiens]
gi|55926076|ref|NP_001007505.1| rab14, member ras oncogene family [Xenopus (Silurana) tropicalis]
gi|61098298|ref|NP_001012814.1| ras-related protein Rab-14 [Gallus gallus]
gi|147900213|ref|NP_001087980.1| RAB14, member RAS oncogene family [Xenopus laevis]
gi|195539521|ref|NP_001124226.1| ras-related protein Rab-14 [Bos taurus]
gi|302563523|ref|NP_001181724.1| ras-related protein Rab-14 [Macaca mulatta]
gi|327532767|ref|NP_001126022.1| ras-related protein Rab-14 [Pongo abelii]
gi|73971644|ref|XP_532048.2| PREDICTED: ras-related protein Rab-14 isoform 1 [Canis lupus
familiaris]
gi|109110403|ref|XP_001093688.1| PREDICTED: ras-related protein Rab-14-like isoform 1 [Macaca
mulatta]
gi|149641912|ref|XP_001512641.1| PREDICTED: ras-related protein Rab-14-like [Ornithorhynchus
anatinus]
gi|149738078|ref|XP_001504767.1| PREDICTED: ras-related protein Rab-14-like [Equus caballus]
gi|291408446|ref|XP_002720547.1| PREDICTED: GTPase Rab14 [Oryctolagus cuniculus]
gi|296190707|ref|XP_002743309.1| PREDICTED: ras-related protein Rab-14 [Callithrix jacchus]
gi|297270257|ref|XP_002800040.1| PREDICTED: ras-related protein Rab-14-like isoform 3 [Macaca
mulatta]
gi|301760428|ref|XP_002916000.1| PREDICTED: ras-related protein Rab-14-like [Ailuropoda melanoleuca]
gi|326930488|ref|XP_003211378.1| PREDICTED: ras-related protein Rab-14-like [Meleagris gallopavo]
gi|327290961|ref|XP_003230190.1| PREDICTED: ras-related protein Rab-14-like [Anolis carolinensis]
gi|332229896|ref|XP_003264122.1| PREDICTED: ras-related protein Rab-14 [Nomascus leucogenys]
gi|332832748|ref|XP_001149341.2| PREDICTED: ras-related protein Rab-14 [Pan troglodytes]
gi|334311476|ref|XP_001369724.2| PREDICTED: ras-related protein Rab-14-like [Monodelphis domestica]
gi|344271990|ref|XP_003407819.1| PREDICTED: ras-related protein Rab-14-like [Loxodonta africana]
gi|348586253|ref|XP_003478883.1| PREDICTED: ras-related protein Rab-14-like [Cavia porcellus]
gi|354491502|ref|XP_003507894.1| PREDICTED: ras-related protein Rab-14-like [Cricetulus griseus]
gi|395505605|ref|XP_003757130.1| PREDICTED: ras-related protein Rab-14 [Sarcophilus harrisii]
gi|397526487|ref|XP_003833155.1| PREDICTED: ras-related protein Rab-14 [Pan paniscus]
gi|402896514|ref|XP_003911342.1| PREDICTED: ras-related protein Rab-14 [Papio anubis]
gi|402896516|ref|XP_003911343.1| PREDICTED: ras-related protein Rab-14 [Papio anubis]
gi|403266081|ref|XP_003925225.1| PREDICTED: ras-related protein Rab-14 [Saimiri boliviensis
boliviensis]
gi|403266083|ref|XP_003925226.1| PREDICTED: ras-related protein Rab-14 [Saimiri boliviensis
boliviensis]
gi|410978973|ref|XP_003995861.1| PREDICTED: ras-related protein Rab-14 [Felis catus]
gi|426219615|ref|XP_004004014.1| PREDICTED: ras-related protein Rab-14 [Ovis aries]
gi|426362889|ref|XP_004048583.1| PREDICTED: ras-related protein Rab-14 isoform 1 [Gorilla gorilla
gorilla]
gi|426362891|ref|XP_004048584.1| PREDICTED: ras-related protein Rab-14 isoform 2 [Gorilla gorilla
gorilla]
gi|432885910|ref|XP_004074817.1| PREDICTED: ras-related protein Rab-14-like [Oryzias latipes]
gi|46577103|sp|Q91V41.3|RAB14_MOUSE RecName: Full=Ras-related protein Rab-14
gi|75054939|sp|Q5R8Z8.3|RAB14_PONAB RecName: Full=Ras-related protein Rab-14
gi|75571353|sp|Q5ZKU5.3|RAB14_CHICK RecName: Full=Ras-related protein Rab-14
gi|85700392|sp|P61106.4|RAB14_HUMAN RecName: Full=Ras-related protein Rab-14
gi|11274539|pir||T47160 hypothetical protein DKFZp762K0911.1 - human
gi|6563200|gb|AAF17194.1|AF112206_1 ras-related protein rab-14 [Homo sapiens]
gi|7328166|emb|CAB82414.1| hypothetical protein [Homo sapiens]
gi|10435483|dbj|BAB14598.1| unnamed protein product [Homo sapiens]
gi|12832884|dbj|BAB22298.1| unnamed protein product [Mus musculus]
gi|13543869|gb|AAH06081.1| RAB14, member RAS oncogene family [Homo sapiens]
gi|14290609|gb|AAH09085.1| RAB14, member RAS oncogene family [Mus musculus]
gi|19263820|gb|AAH25139.1| RAB14, member RAS oncogene family [Mus musculus]
gi|34785287|gb|AAH56648.1| RAB14, member RAS oncogene family [Mus musculus]
gi|45444739|gb|AAS64573.1| F protein-binding protein 1 [Homo sapiens]
gi|48146905|emb|CAG33675.1| RAB14 [Homo sapiens]
gi|51261919|gb|AAH79941.1| RAB14, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|52138917|gb|AAH82642.1| LOC494665 protein [Xenopus laevis]
gi|53130638|emb|CAG31648.1| hypothetical protein RCJMB04_9b24 [Gallus gallus]
gi|55730075|emb|CAH91762.1| hypothetical protein [Pongo abelii]
gi|63087687|emb|CAI92125.1| RAB14 protein [Mus musculus]
gi|74144398|dbj|BAE36051.1| unnamed protein product [Mus musculus]
gi|74151588|dbj|BAE41143.1| unnamed protein product [Mus musculus]
gi|74214376|dbj|BAE40426.1| unnamed protein product [Mus musculus]
gi|74223093|dbj|BAE40686.1| unnamed protein product [Mus musculus]
gi|74227269|dbj|BAE38391.1| unnamed protein product [Mus musculus]
gi|74228978|dbj|BAE21957.1| unnamed protein product [Mus musculus]
gi|89269928|emb|CAJ81706.1| RAB14, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|112292987|dbj|BAF02871.1| Rab14 [Mus musculus]
gi|117645408|emb|CAL38170.1| hypothetical protein [synthetic construct]
gi|117645524|emb|CAL38228.1| hypothetical protein [synthetic construct]
gi|119607893|gb|EAW87487.1| RAB14, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119607894|gb|EAW87488.1| RAB14, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|148676698|gb|EDL08645.1| RAB14, member RAS oncogene family, isoform CRA_b [Mus musculus]
gi|149038930|gb|EDL93150.1| RAB14, member RAS oncogene family [Rattus norvegicus]
gi|158455025|gb|AAI03316.2| RAB14 protein [Bos taurus]
gi|165971228|gb|AAI58586.1| RAB14, member RAS oncogene family [Rattus norvegicus]
gi|193786920|dbj|BAG52243.1| unnamed protein product [Homo sapiens]
gi|261860956|dbj|BAI47000.1| RAB14, member RAS oncogene family [synthetic construct]
gi|296484316|tpg|DAA26431.1| TPA: RAB14, member RAS oncogene family [Bos taurus]
gi|344243592|gb|EGV99695.1| Ras-related protein Rab-14 [Cricetulus griseus]
gi|351698913|gb|EHB01832.1| Ras-related protein Rab-14 [Heterocephalus glaber]
gi|355567473|gb|EHH23814.1| Ras-related protein Rab-14 [Macaca mulatta]
gi|355753061|gb|EHH57107.1| Ras-related protein Rab-14 [Macaca fascicularis]
gi|380784807|gb|AFE64279.1| ras-related protein Rab-14 [Macaca mulatta]
gi|383409425|gb|AFH27926.1| ras-related protein Rab-14 [Macaca mulatta]
gi|384940268|gb|AFI33739.1| ras-related protein Rab-14 [Macaca mulatta]
gi|410217966|gb|JAA06202.1| RAB14, member RAS oncogene family [Pan troglodytes]
gi|410258386|gb|JAA17160.1| RAB14, member RAS oncogene family [Pan troglodytes]
gi|410308836|gb|JAA33018.1| RAB14, member RAS oncogene family [Pan troglodytes]
gi|410348640|gb|JAA40924.1| RAB14, member RAS oncogene family [Pan troglodytes]
gi|417397261|gb|JAA45664.1| Putative rab subfamily protein of small gtpase [Desmodus rotundus]
gi|431900765|gb|ELK08206.1| Ras-related protein Rab-14 [Pteropus alecto]
Length = 215
Score = 187 bits (475), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 88/178 (49%), Positives = 124/178 (69%)
Query: 22 PDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQI 81
P Y+FK ++IGD VGKS +L +FT+ +F D TIGVEF TR + ++G+ IK QI
Sbjct: 5 PYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQI 64
Query: 82 WDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGN 141
WDTAGQER+RAVT +YYRGA GA++VYDIT+R +++H++ W+ + R + + IILIGN
Sbjct: 65 WDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGN 124
Query: 142 KSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELE 199
K+DL R V+ E+A +FAE+ GL F EASA G+NV+ AF ++IY + L+
Sbjct: 125 KADLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQNIQDGSLD 182
>gi|387017952|gb|AFJ51094.1| ras-related protein Rab-14-like [Crotalus adamanteus]
Length = 215
Score = 187 bits (475), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 88/178 (49%), Positives = 124/178 (69%)
Query: 22 PDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQI 81
P Y+FK ++IGD VGKS +L +FT+ +F D TIGVEF TR + ++G+ IK QI
Sbjct: 5 PYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQI 64
Query: 82 WDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGN 141
WDTAGQER+RAVT +YYRGA GA++VYDIT+R +++H++ W+ + R + + IILIGN
Sbjct: 65 WDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGN 124
Query: 142 KSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELE 199
K+DL R V+ E+A +FAE+ GL F EASA G+NV+ AF ++IY + L+
Sbjct: 125 KADLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQNIQDGSLD 182
>gi|410904150|ref|XP_003965555.1| PREDICTED: ras-related protein Rab-14-like [Takifugu rubripes]
Length = 215
Score = 187 bits (475), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 88/178 (49%), Positives = 124/178 (69%)
Query: 22 PDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQI 81
P Y+FK ++IGD VGKS +L +FT+ +F D TIGVEF TR + ++G+ IK QI
Sbjct: 5 PYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQI 64
Query: 82 WDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGN 141
WDTAGQER+RAVT +YYRGA GA++VYDIT+R +++H++ W+ + R + + IILIGN
Sbjct: 65 WDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGN 124
Query: 142 KSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELE 199
K+DL R V+ E+A +FAE+ GL F EASA G+NV+ AF ++IY + L+
Sbjct: 125 KADLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQNIQDGSLD 182
>gi|63087695|emb|CAI92129.1| RAB14 protein [Mus musculus]
Length = 215
Score = 187 bits (475), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 88/178 (49%), Positives = 124/178 (69%)
Query: 22 PDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQI 81
P Y+FK ++IGD VGKS +L +FT+ +F D TIGVEF TR + ++G+ IK QI
Sbjct: 5 PYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQI 64
Query: 82 WDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGN 141
WDTAGQER+RAVT +YYRGA GA++VYDIT+R +++H++ W+ + R + + IILIGN
Sbjct: 65 WDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGN 124
Query: 142 KSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELE 199
K+DL R V+ E+A +FAE+ GL F EASA G+NV+ AF ++IY + L+
Sbjct: 125 KADLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQNIQDGSLD 182
>gi|348536088|ref|XP_003455529.1| PREDICTED: ras-related protein Rab-14-like [Oreochromis niloticus]
Length = 215
Score = 187 bits (474), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 96/219 (43%), Positives = 138/219 (63%), Gaps = 11/219 (5%)
Query: 22 PDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQI 81
P Y+FK ++IGD VGKS +L +FT+ +F D TIGVEF TR + ++G+ +K QI
Sbjct: 5 PYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIMEVHGQKVKLQI 64
Query: 82 WDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGN 141
WDTAGQER+RAVT +YYRGA GA++VYDIT+R +++H++ W+ + R + + IILIGN
Sbjct: 65 WDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGN 124
Query: 142 KSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECG 201
K+DL R V+ E+A +FAE+ GL F EASA G+NV+ AF + IY + L+
Sbjct: 125 KADLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEEAFLEAAKRIYQNIQDGSLDLN 184
Query: 202 ---NGKVDGPPMLAGSKIDVISGADLEISEMKKLSTCSC 237
+G P L G + + AD + ++ CSC
Sbjct: 185 AAESGVQHKPSTLQGGRPN----ADNQPAK----EGCSC 215
>gi|145533477|ref|XP_001452483.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124420182|emb|CAK85086.1| unnamed protein product [Paramecium tetraurelia]
Length = 215
Score = 187 bits (474), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 88/165 (53%), Positives = 117/165 (70%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
D + K++++GDS VGK+ +++RF + +F DSK T+GVEF R + I GK IKAQ+WDTA
Sbjct: 8 DILMKIIIVGDSGVGKTNLVNRFAQQKFLDDSKPTVGVEFFFRHIDIMGKTIKAQVWDTA 67
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQE++RA+T YYRGALGA++ YDITK QSF +V RW+EELR H DS++ ++LIG KSDL
Sbjct: 68 GQEKFRAITYGYYRGALGAMICYDITKEQSFLNVERWIEELREHGDSNLVMMLIGTKSDL 127
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIY 190
R V ED + A + F E SAL NV AF LL++IY
Sbjct: 128 ESKRVVRNEDGTQKALQHNMAFLETSALKAANVGKAFSMLLEKIY 172
>gi|449269091|gb|EMC79900.1| Ras-related protein Rab-14, partial [Columba livia]
Length = 212
Score = 187 bits (474), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 88/178 (49%), Positives = 124/178 (69%)
Query: 22 PDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQI 81
P Y+FK ++IGD VGKS +L +FT+ +F D TIGVEF TR + ++G+ IK QI
Sbjct: 5 PYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQI 64
Query: 82 WDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGN 141
WDTAGQER+RAVT +YYRGA GA++VYDIT+R +++H++ W+ + R + + IILIGN
Sbjct: 65 WDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGN 124
Query: 142 KSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELE 199
K+DL R V+ E+A +FAE+ GL F EASA G+NV+ AF ++IY + L+
Sbjct: 125 KADLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQNIQDGSLD 182
>gi|17862462|gb|AAL39708.1| LD29476p [Drosophila melanogaster]
Length = 215
Score = 187 bits (474), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 87/178 (48%), Positives = 124/178 (69%)
Query: 22 PDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQI 81
P +Y+FK ++IGD VGKS +L +FT+ +F + TIGVEF TR + ++ K IK QI
Sbjct: 5 PYNYNYIFKYIIIGDMGVGKSCLLHQFTEKKFMANCPHTIGVEFGTRIIEVDDKKIKLQI 64
Query: 82 WDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGN 141
WDTAGQER+RAVT +Y+RGA GA++VYDIT+R +++H++ W+ + R + S I LIGN
Sbjct: 65 WDTAGQERFRAVTRSYHRGAAGALMVYDITRRSTYNHLSSWLTDTRNLTNPSTVIFLIGN 124
Query: 142 KSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELE 199
KSDL R V+ E+A EFA++ GL F EASA+ G NV+ AF ++IY + + L+
Sbjct: 125 KSDLESTREVTYEEAKEFADENGLMFLEASAMTGQNVEEAFLETARKIYQNIQEGRLD 182
>gi|242007549|ref|XP_002424602.1| predicted protein [Pediculus humanus corporis]
gi|212508045|gb|EEB11864.1| predicted protein [Pediculus humanus corporis]
Length = 215
Score = 187 bits (474), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 86/172 (50%), Positives = 120/172 (69%)
Query: 22 PDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQI 81
P Y+FK ++IGD VGKS +L +FT+ +F D T+GVEF TR + ++G+ IK QI
Sbjct: 5 PYNYSYIFKYILIGDMGVGKSCLLHQFTEKKFMSDCHHTLGVEFGTRVIEVSGQKIKLQI 64
Query: 82 WDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGN 141
WDTAGQER+RAVT +YYRGA GA++VYDIT+R +++H++ W+ + R + S I LIGN
Sbjct: 65 WDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSNWLTDTRNLTNPSTVIFLIGN 124
Query: 142 KSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAV 193
K DL R V+ E+A +FAE+ GL F EASA G+NV+ AF +IY ++
Sbjct: 125 KCDLNQQRDVTYEEAKQFAEENGLMFVEASAKTGENVEEAFLETANKIYQSI 176
>gi|301299077|gb|ADK66883.1| Rab14 [Aiptasia pulchella]
Length = 217
Score = 187 bits (474), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 88/178 (49%), Positives = 122/178 (68%)
Query: 22 PDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQI 81
P Y+FK ++IGD VGKS +L +FT+ +F D TIGVEF TR + + G+ IK QI
Sbjct: 6 PYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVAGQKIKLQI 65
Query: 82 WDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGN 141
WDTAGQER+RAVT +YYRGA GA++VYDIT+R +++H++ W+ + R + + I LIGN
Sbjct: 66 WDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIFLIGN 125
Query: 142 KSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELE 199
KSDL R V+ E+A +FAE+ GL F EASA G+NV+ AF ++IY + L+
Sbjct: 126 KSDLDAQRDVTYEEAKQFAEENGLLFCEASAKTGENVEDAFLETAKKIYQNIQDGSLD 183
>gi|41393147|ref|NP_958903.1| ras-related protein Rab-14 [Danio rerio]
gi|292614309|ref|XP_002662217.1| PREDICTED: ras-related protein Rab-14-like [Danio rerio]
gi|28279556|gb|AAH45374.1| RAB14, member RAS oncogene family [Danio rerio]
gi|157423545|gb|AAI53494.1| RAB14, member RAS oncogene family [Danio rerio]
gi|182890232|gb|AAI65420.1| Rab14 protein [Danio rerio]
Length = 215
Score = 186 bits (473), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 87/178 (48%), Positives = 124/178 (69%)
Query: 22 PDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQI 81
P Y+FK ++IGD VGKS +L +FT+ +F D TIGVEF TR + ++G+ +K QI
Sbjct: 5 PYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKVKLQI 64
Query: 82 WDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGN 141
WDTAGQER+RAVT +YYRGA GA++VYDIT+R +++H++ W+ + R + + IILIGN
Sbjct: 65 WDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGN 124
Query: 142 KSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELE 199
K+DL R V+ E+A +FAE+ GL F EASA G+NV+ AF ++IY + L+
Sbjct: 125 KADLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQNIQDGSLD 182
>gi|291239338|ref|XP_002739577.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii]
Length = 216
Score = 186 bits (473), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 88/178 (49%), Positives = 123/178 (69%)
Query: 22 PDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQI 81
P Y+FK ++IGD VGKS +L +FT+ +F D TIGVEF TR + ++G+ IK QI
Sbjct: 5 PYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQI 64
Query: 82 WDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGN 141
WDTAGQER+RAVT +YYRGA GA++VYDIT+R +++H++ W+ + R + + I LIGN
Sbjct: 65 WDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIFLIGN 124
Query: 142 KSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELE 199
KSDL R V+ E+A +FA++ GL F EASA GDNV+ AF ++IY + L+
Sbjct: 125 KSDLEAQRDVTYEEAKQFADENGLMFLEASAKTGDNVEDAFLETARKIYQNIQDGSLD 182
>gi|41053455|ref|NP_956977.1| ras-related protein Rab-14 [Danio rerio]
gi|34849498|gb|AAH58341.1| RAB14, member RAS oncogene family, like [Danio rerio]
Length = 215
Score = 186 bits (473), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 88/178 (49%), Positives = 123/178 (69%)
Query: 22 PDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQI 81
P Y+FK ++IGD VGKS +L +FT+ +F D TIGVEF TR + ++G+ IK QI
Sbjct: 5 PYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIMEVSGQKIKLQI 64
Query: 82 WDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGN 141
WDTAGQER+RAVT +YYRGA GA++VYDIT+R +++H+ W+ + R + + IILIGN
Sbjct: 65 WDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLGSWLTDARNLTNPNTVIILIGN 124
Query: 142 KSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELE 199
K+DL R V+ E+A +FAE+ GL F EASA G+NV+ AF ++IY + L+
Sbjct: 125 KADLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQNIQDGSLD 182
>gi|308159460|gb|EFO61990.1| Rab11 [Giardia lamblia P15]
Length = 216
Score = 186 bits (473), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 92/175 (52%), Positives = 130/175 (74%), Gaps = 6/175 (3%)
Query: 21 IPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTI--NGKII- 77
+ D D+++K+++IGDSAVGKS ILSRFT N+F S +TIGVEF T+T+T+ GK+I
Sbjct: 1 MTDAYDHLYKLILIGDSAVGKSNILSRFTSNKFNASSAATIGVEFTTKTLTVEVQGKMIS 60
Query: 78 -KAQIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELR-AHADSS-I 134
+ Q WDTAGQERYR++TS+YYRGA G ++V+D+TKR SF+H W+ ELR A A+S+
Sbjct: 61 TRLQCWDTAGQERYRSITSSYYRGAHGCLLVFDVTKRTSFEHCTEWLTELRNASANSTAC 120
Query: 135 RIILIGNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEI 189
++IL+GNK DL +R V+ E+A FA+ QGL + E SA +G +D AF +L+ E+
Sbjct: 121 KVILVGNKVDLRHLREVTTEEAAAFAQQQGLSYIETSASSGHGIDDAFKQLVIEL 175
>gi|259089516|ref|NP_001158557.1| Ras-related protein Rab-11A [Oncorhynchus mykiss]
gi|225704820|gb|ACO08256.1| Ras-related protein Rab-11A [Oncorhynchus mykiss]
Length = 205
Score = 186 bits (472), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 87/138 (63%), Positives = 115/138 (83%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ D++FKVV+IGDS VGKS +LSRFT+N+F +SKSTIGVEF TR++ ++GK IKAQIW
Sbjct: 6 DEYDFLFKVVLIGDSGVGKSNLLSRFTRNDFNLESKSTIGVEFATRSIQVDGKTIKAQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI K ++++V RW++ELR HAD++I I+ NK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMPADNK 125
Query: 143 SDLVDMRAVSAEDAVEFA 160
SDL +RAV ++A FA
Sbjct: 126 SDLRHLRAVPTDEARAFA 143
>gi|71661053|ref|XP_817553.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70882752|gb|EAN95702.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 211
Score = 186 bits (472), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 94/211 (44%), Positives = 132/211 (62%), Gaps = 4/211 (1%)
Query: 27 YVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTAG 86
Y+FK ++IGD VGKS ++ RFT+ F D TIGVEF T TV ING+ +K QIWDTAG
Sbjct: 5 YIFKYIIIGDMGVGKSCLMQRFTEQRFRNDLPHTIGVEFGTITVDINGETVKLQIWDTAG 64
Query: 87 QERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDLV 146
QER+R+VT YYRGA GA++VYD+++R++F + W+++ R + + ++L+GNKSDL
Sbjct: 65 QERFRSVTRGYYRGAAGALLVYDVSRRETFSRIGTWLQDARGNTNPHTVMMLVGNKSDLD 124
Query: 147 DMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNGKVD 206
+ R VS E+AV+FA++ L F E SALNGDNV+ AF +I+ V L G D
Sbjct: 125 ESREVSYEEAVKFADENNLLFVECSALNGDNVEQAFLSTAHKIHEKVMCGILNPG----D 180
Query: 207 GPPMLAGSKIDVISGADLEISEMKKLSTCSC 237
+ + + D E K +TC C
Sbjct: 181 PESGVQLHNATLPNAGDSTKRERKGDNTCPC 211
>gi|158296675|ref|XP_555021.3| AGAP008419-PA [Anopheles gambiae str. PEST]
gi|157014825|gb|EAL39571.3| AGAP008419-PA [Anopheles gambiae str. PEST]
Length = 215
Score = 186 bits (472), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 86/178 (48%), Positives = 122/178 (68%)
Query: 22 PDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQI 81
P Y+FK ++IGD VGKS +L +FT+ +F TIGVEF TR + ++ + IK QI
Sbjct: 5 PYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMASCPHTIGVEFGTRIIEVDKQKIKLQI 64
Query: 82 WDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGN 141
WDTAGQER+RAVT +YYRGA GA++VYDIT+R +++H++ W+ + R + S I LIGN
Sbjct: 65 WDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTRNLTNPSTVIFLIGN 124
Query: 142 KSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELE 199
KSDL R V+ E+A FA++ GL F+EASA+ G NV+ AF ++IY ++ L+
Sbjct: 125 KSDLESTREVTYEEAKNFADEHGLLFAEASAMTGQNVEEAFLETARKIYQSIKDGRLD 182
>gi|357612414|gb|EHJ67983.1| Rab-protein 14 [Danaus plexippus]
Length = 213
Score = 186 bits (472), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 88/178 (49%), Positives = 122/178 (68%)
Query: 22 PDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQI 81
P Y+FK ++IGD VGKS +L +FT+ +F D TIGVEF TR + + G+ IK QI
Sbjct: 5 PYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVAGQKIKLQI 64
Query: 82 WDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGN 141
WDTAGQER+RAVT +YYRGA GA++VYDIT+R +++H++ W+ + R + S I LIGN
Sbjct: 65 WDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTRNLTNPSTVIFLIGN 124
Query: 142 KSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELE 199
KSDL R V+ E+A +FA++ GL F EASA G NV+ AF ++IY ++ L+
Sbjct: 125 KSDLDGQRDVTYEEAKQFADENGLMFVEASAKTGQNVEEAFLETAKKIYQSIQDGRLD 182
>gi|74137312|dbj|BAE22024.1| unnamed protein product [Mus musculus]
Length = 193
Score = 186 bits (472), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 94/173 (54%), Positives = 123/173 (71%), Gaps = 10/173 (5%)
Query: 53 FFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTAGQERYRAVTSAYYRGALGAVVVYDITK 112
F +SKSTIGVEF TR++ ++GK IKAQIWDTAGQERYRA+TSAYYRGA+GA++VYDI K
Sbjct: 11 LFKESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAK 70
Query: 113 RQSFDHVARWVEELRAHADSSIRIILIGNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASA 172
++++V RW++ELR HADS+I I+L+GNKSDL +RAV ++A FAE L F E SA
Sbjct: 71 HLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSA 130
Query: 173 LNGDNVDTAFFRLLQEIYGAVSKKEL--------ECGNGKVD--GPPMLAGSK 215
++ NV+ AF +L EIY VS+K++ GN VD PP G +
Sbjct: 131 MDSTNVEEAFKNILTEIYRIVSQKQIADRAAHDESPGNNVVDISVPPTTDGQR 183
>gi|170037321|ref|XP_001846507.1| GTP-binding protein YPTC4 [Culex quinquefasciatus]
gi|167880416|gb|EDS43799.1| GTP-binding protein YPTC4 [Culex quinquefasciatus]
Length = 215
Score = 186 bits (472), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 86/178 (48%), Positives = 123/178 (69%)
Query: 22 PDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQI 81
P Y+FK ++IGD VGKS +L +FT+ +F TIGVEF TR + ++ + IK QI
Sbjct: 5 PYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMASCPHTIGVEFGTRIIEVDKQKIKLQI 64
Query: 82 WDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGN 141
WDTAGQER+RAVT +YYRGA GA++VYDIT+R +++H++ W+ + R + S I LIGN
Sbjct: 65 WDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTRNLTNPSTVIFLIGN 124
Query: 142 KSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELE 199
KSDL R V+ E+A +FA++ GL F+EASA+ G NV+ AF ++IY ++ L+
Sbjct: 125 KSDLESTREVTYEEAKKFADENGLMFAEASAMTGQNVEEAFLETARKIYQSIQDGRLD 182
>gi|71661548|ref|XP_817794.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70883006|gb|EAN95943.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 211
Score = 186 bits (472), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 94/211 (44%), Positives = 132/211 (62%), Gaps = 4/211 (1%)
Query: 27 YVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTAG 86
Y+FK ++IGD VGKS ++ RFT+ F D TIGVEF T TV ING+ +K QIWDTAG
Sbjct: 5 YIFKYIIIGDMGVGKSCLMQRFTEQRFRNDLPHTIGVEFGTITVDINGETVKLQIWDTAG 64
Query: 87 QERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDLV 146
QER+R+VT YYRGA GA++VYD+++R++F + W+++ R + + ++L+GNKSDL
Sbjct: 65 QERFRSVTRGYYRGAAGALLVYDVSRRETFSRIGTWLQDARGNTNPHTVMMLVGNKSDLD 124
Query: 147 DMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNGKVD 206
+ R VS E+AV+FA++ L F E SALNGDNV+ AF +I+ V L G D
Sbjct: 125 ESREVSYEEAVKFADENNLLFVECSALNGDNVEQAFLSTAHKIHEKVMCGILNPG----D 180
Query: 207 GPPMLAGSKIDVISGADLEISEMKKLSTCSC 237
+ + + D E K +TC C
Sbjct: 181 PESGVQLHNATLPNAGDSTKRERKGDNTCHC 211
>gi|390333617|ref|XP_001198666.2| PREDICTED: ras-related protein Rab-14-like [Strongylocentrotus
purpuratus]
gi|390369429|ref|XP_001198716.2| PREDICTED: ras-related protein Rab-14-like [Strongylocentrotus
purpuratus]
Length = 215
Score = 186 bits (472), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 88/178 (49%), Positives = 123/178 (69%)
Query: 22 PDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQI 81
P Y+FK ++IGD VGKS +L +FT+ +F D TIGVEF TR + ++G+ IK QI
Sbjct: 5 PYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQI 64
Query: 82 WDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGN 141
WDTAGQER+RAVT +YYRGA GA++VYDIT+R +++H++ W+ + R + + I LIGN
Sbjct: 65 WDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIFLIGN 124
Query: 142 KSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELE 199
KSDL R V+ E+A +FAE+ GL F EASA GD+V+ AF ++IY + L+
Sbjct: 125 KSDLEAQRDVTYEEAKQFAEENGLLFLEASAKTGDHVEEAFLDTAKKIYQNIQDGSLD 182
>gi|157135158|ref|XP_001656549.1| ras-related protein Rab, putative [Aedes aegypti]
gi|108870279|gb|EAT34504.1| AAEL013252-PC [Aedes aegypti]
Length = 215
Score = 186 bits (472), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 86/178 (48%), Positives = 123/178 (69%)
Query: 22 PDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQI 81
P Y+FK ++IGD VGKS +L +FT+ +F TIGVEF TR + ++ + IK QI
Sbjct: 5 PYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMASCPHTIGVEFGTRIIEVDKQKIKLQI 64
Query: 82 WDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGN 141
WDTAGQER+RAVT +YYRGA GA++VYDIT+R +++H++ W+ + R + S I LIGN
Sbjct: 65 WDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTRNLTNPSTVIFLIGN 124
Query: 142 KSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELE 199
KSDL R V+ E+A +FA++ GL F+EASA+ G NV+ AF ++IY ++ L+
Sbjct: 125 KSDLESTREVTYEEAKKFADENGLMFAEASAMTGQNVEEAFLETARKIYQSIQDGRLD 182
>gi|414969|gb|AAA80151.1| Rab4 [Dictyostelium discoideum]
Length = 205
Score = 186 bits (472), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 93/197 (47%), Positives = 130/197 (65%), Gaps = 2/197 (1%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
+Y+FK ++IGD VGKS +L +FT+N+F DS TIGVEF TR V +N K IK QIWDTA
Sbjct: 6 EYIFKYIIIGDMGVGKSCLLHQFTENKFVPDSPHTIGVEFGTRIVDVNNKKIKLQIWDTA 65
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQER+RAVT +YYRGA GA++VYDIT+R +++H+ W+ + R + + I+LIGNK DL
Sbjct: 66 GQERFRAVTRSYYRGAAGALLVYDITRRITYNHLTTWLTDARNLTNPNTVIMLIGNKKDL 125
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELEC--GNG 203
R V+ E+A FA+ GL F E+SA G+NV+ AF R + I+ +V + ++ G
Sbjct: 126 EGQRDVTYEEASAFAKQNGLIFVESSAKTGENVEEAFLRTAKLIFQSVQEGNVDLIPDGG 185
Query: 204 KVDGPPMLAGSKIDVIS 220
PP K ++ S
Sbjct: 186 ITKNPPQTITDKKNLFS 202
>gi|255570175|ref|XP_002526048.1| protein with unknown function [Ricinus communis]
gi|223534629|gb|EEF36325.1| protein with unknown function [Ricinus communis]
Length = 211
Score = 186 bits (471), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 94/192 (48%), Positives = 128/192 (66%), Gaps = 9/192 (4%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
DY+FK ++IGD+ VGKS +L +FT F TIGVEF R VTI+ + IK QIWDTA
Sbjct: 4 DYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDSRPIKLQIWDTA 63
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQE +R++T +YYRGA GA++VYDIT+R++F+H+A W+E+ R HA+ ++ I+LIGNK DL
Sbjct: 64 GQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMTIMLIGNKCDL 123
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFR----LLQEIYGAV-----SKK 196
RAVS E+ +FA++ GL F EASA NV+ AF R +LQ I V
Sbjct: 124 AHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIRTAGKILQNIQEGVFDVSNESS 183
Query: 197 ELECGNGKVDGP 208
++ G G+ GP
Sbjct: 184 GIKVGYGRPQGP 195
>gi|145476441|ref|XP_001424243.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124391306|emb|CAK56845.1| unnamed protein product [Paramecium tetraurelia]
Length = 205
Score = 186 bits (471), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 85/169 (50%), Positives = 127/169 (75%)
Query: 22 PDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQI 81
D DY +K+V+IGDS VGK+ I+++FT+ EF ++K+T+GVEF + + I+ KIIKAQ+
Sbjct: 4 SDDYDYQYKIVIIGDSGVGKTNIMTQFTRGEFSEETKTTVGVEFANKQLVIDDKIIKAQL 63
Query: 82 WDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGN 141
WDTAGQERYRA+ S+YY+GA GA++V+DITK+ +FD+V RW++E++ + I IIL+GN
Sbjct: 64 WDTAGQERYRAIISSYYKGASGALIVFDITKQSTFDNVDRWMKEVQESTSNEISIILVGN 123
Query: 142 KSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIY 190
KSDL +R VS++ + +A + F E SA +G NV+ AF +L+ EI+
Sbjct: 124 KSDLRHLRQVSSDVSSAYASKHKIAFLETSAKDGANVNEAFNKLINEIH 172
>gi|407866814|gb|EKG08400.1| hypothetical protein TCSYLVIO_000448 [Trypanosoma cruzi]
Length = 211
Score = 186 bits (471), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 94/211 (44%), Positives = 132/211 (62%), Gaps = 4/211 (1%)
Query: 27 YVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTAG 86
Y+FK ++IGD VGKS ++ RFT+ F D TIGVEF T TV ING+ +K QIWDTAG
Sbjct: 5 YIFKYIIIGDMGVGKSCLMQRFTEQRFRNDLPHTIGVEFGTITVDINGETVKLQIWDTAG 64
Query: 87 QERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDLV 146
QER+R+VT YYRGA GA++VYD+++R++F + W+++ R + + ++L+GNKSDL
Sbjct: 65 QERFRSVTRGYYRGAAGALLVYDVSRRETFSRIGTWLQDARGNTNPHTVMMLVGNKSDLD 124
Query: 147 DMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNGKVD 206
+ R VS E+AV+FA++ L F E SALNGDNV+ AF +I+ V L G D
Sbjct: 125 ESREVSYEEAVKFADENNLLFVECSALNGDNVEQAFLSTAHKIHEKVMCGILNPG----D 180
Query: 207 GPPMLAGSKIDVISGADLEISEMKKLSTCSC 237
+ + + D E K +TC C
Sbjct: 181 PESGVQLHNATLPNAGDSTKRERKGDNTCRC 211
>gi|440799928|gb|ELR20971.1| Rab4, putative [Acanthamoeba castellanii str. Neff]
Length = 213
Score = 186 bits (471), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 87/177 (49%), Positives = 125/177 (70%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
+Y+FK ++IGD VGKS +L +FT+ +F DS TIGVEF TR + + GK IK QIWDTA
Sbjct: 7 EYIFKYIIIGDMGVGKSCLLHQFTEKKFIPDSPHTIGVEFGTRIIEVMGKKIKLQIWDTA 66
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQER+RAVT +YYRGA GA++VYDIT+R +++H+ W+ + R + + I++IGNK DL
Sbjct: 67 GQERFRAVTRSYYRGAAGALLVYDITRRPTYNHLTSWLTDARNLTNPNTVIMMIGNKKDL 126
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
D R V+ E+A FA++ GL F EASA G+NV+ AF + + I+ +V ++ G+
Sbjct: 127 EDQRDVTYEEASNFAKENGLIFLEASAKTGENVEEAFLKTAKLIFQSVQDGSVDVGS 183
>gi|73535767|pdb|1Z0F|A Chain A, Gdp-Bound Rab14 Gtpase
Length = 179
Score = 186 bits (471), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 87/169 (51%), Positives = 121/169 (71%)
Query: 22 PDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQI 81
P Y+FK ++IGD VGKS +L +FT+ +F D TIGVEF TR + ++G+ IK QI
Sbjct: 9 PYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQI 68
Query: 82 WDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGN 141
WDTAGQER+RAVT +YYRGA GA++VYDIT+R +++H++ W+ + R + + IILIGN
Sbjct: 69 WDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGN 128
Query: 142 KSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIY 190
K+DL R V+ E+A +FAE+ GL F EASA G+NV+ AF ++IY
Sbjct: 129 KADLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIY 177
>gi|322793255|gb|EFZ16912.1| hypothetical protein SINV_14392 [Solenopsis invicta]
Length = 265
Score = 186 bits (471), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 87/178 (48%), Positives = 122/178 (68%)
Query: 22 PDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQI 81
P Y+FK ++IGD VGKS +L +FT+ +F D TIGVEF TR + + G+ IK QI
Sbjct: 52 PYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVAGQKIKLQI 111
Query: 82 WDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGN 141
WDTAGQER+RAVT +YYRGA GA++VYDIT+R +++H++ W+ + R + S I LIGN
Sbjct: 112 WDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTRNLTNPSTVIFLIGN 171
Query: 142 KSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELE 199
KSDL R V+ E+A +FA++ GL F EASA G NV+ AF ++I+ ++ L+
Sbjct: 172 KSDLEGQRDVTYEEAKQFADEHGLMFVEASAKTGHNVEEAFLETAKKIFQSIQDGRLD 229
>gi|356531156|ref|XP_003534144.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein RABA6a-like
[Glycine max]
Length = 218
Score = 186 bits (471), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 98/204 (48%), Positives = 136/204 (66%), Gaps = 11/204 (5%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVT-INGKIIKAQIWDT 84
DY+FKV IG+S VGKS ++SRF K+EF DSK +IGVEF + + K+IKAQIWDT
Sbjct: 12 DYLFKVX-IGESGVGKSNLISRFAKDEFRLDSKPSIGVEFAYGNIKLVRDKLIKAQIWDT 70
Query: 85 AGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSD 144
AGQER+RA+TS+YYRGALGA++VYDITKR +F +V +W+ ELR + ++L+ NKSD
Sbjct: 71 AGQERFRAITSSYYRGALGAMLVYDITKRATFVNVGKWLHELREFGGEDMVVVLVRNKSD 130
Query: 145 LVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNGK 204
L R V E FAE +GL F E SAL NVD AF ++ +I+ +S+K LE
Sbjct: 131 LDQSRQVEREKGKGFAETEGLCFMETSALQNLNVDEAFXEMITKIHDIISQKSLE----- 185
Query: 205 VDGPPMLAGSKIDVISGADLEISE 228
+ G+ +++ SG ++ I++
Sbjct: 186 ----TKMNGAALNLPSGKEIHIAD 205
>gi|387592730|gb|EIJ87754.1| GTPase Ypt3 [Nematocida parisii ERTm3]
gi|387595356|gb|EIJ92980.1| GTPase Ypt3 [Nematocida parisii ERTm1]
Length = 206
Score = 185 bits (470), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 91/179 (50%), Positives = 131/179 (73%), Gaps = 7/179 (3%)
Query: 13 RHQQQENMIPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTI 72
R ++QE +Y++K+V+IGDS+VGK+ +L R N F ++KSTIGVEF T+ +
Sbjct: 2 RREEQE------YEYLYKIVLIGDSSVGKTNLLERLAHNRFNTNTKSTIGVEFDTKCFVV 55
Query: 73 NGKIIKAQIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHV-ARWVEELRAHAD 131
NGK IKAQIWDTAGQERYRA+TSAYYRGA+GA+VVYDIT+++SFD+ W+++L+ +++
Sbjct: 56 NGKKIKAQIWDTAGQERYRAITSAYYRGAVGAIVVYDITRKESFDNARTEWIKQLKDNSE 115
Query: 132 SSIRIILIGNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIY 190
S + I L+GNK+DL + R VS ++A E A+ +E SAL+ NV AF L+++IY
Sbjct: 116 SGLVISLVGNKTDLEEKRQVSQQEAREAAQIGDYLLTETSALSDVNVQEAFEALIKKIY 174
>gi|403183345|gb|EAT34505.2| AAEL013252-PB [Aedes aegypti]
Length = 239
Score = 185 bits (470), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 86/178 (48%), Positives = 123/178 (69%)
Query: 22 PDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQI 81
P Y+FK ++IGD VGKS +L +FT+ +F TIGVEF TR + ++ + IK QI
Sbjct: 29 PYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMASCPHTIGVEFGTRIIEVDKQKIKLQI 88
Query: 82 WDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGN 141
WDTAGQER+RAVT +YYRGA GA++VYDIT+R +++H++ W+ + R + S I LIGN
Sbjct: 89 WDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTRNLTNPSTVIFLIGN 148
Query: 142 KSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELE 199
KSDL R V+ E+A +FA++ GL F+EASA+ G NV+ AF ++IY ++ L+
Sbjct: 149 KSDLESTREVTYEEAKKFADENGLMFAEASAMTGQNVEEAFLETARKIYQSIQDGRLD 206
>gi|290998764|ref|XP_002681950.1| rab family small GTPase [Naegleria gruberi]
gi|284095576|gb|EFC49206.1| rab family small GTPase [Naegleria gruberi]
Length = 215
Score = 185 bits (470), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 90/183 (49%), Positives = 125/183 (68%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
D ++KVVVIGDS VGKS +++RFT+N+F D+K TIGVEF +++ +G IK QIWDTA
Sbjct: 4 DVLYKVVVIGDSGVGKSNLITRFTQNKFTKDTKPTIGVEFGAKSIEYDGVTIKGQIWDTA 63
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQER+RA+++AYYRGA GA++VYDIT ++SFD++ +W +E+ ++ IL+GNK DL
Sbjct: 64 GQERFRAISAAYYRGANGALIVYDITNQESFDNLEKWFKEIENQGENGCINILVGNKCDL 123
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNGKV 205
+R V FAE + F E SAL+ NVD AF LL+EIY S+K + +
Sbjct: 124 NHLRQVETATGRAFAEKHNVSFMETSALDSTNVDEAFTTLLKEIYKTQSRKSKKPEEDRK 183
Query: 206 DGP 208
D P
Sbjct: 184 DEP 186
>gi|350534852|ref|NP_001232642.1| putative RAB14 member RAS oncogene family variant 3 [Taeniopygia
guttata]
gi|197128799|gb|ACH45297.1| putative RAB14 member RAS oncogene family variant 3 [Taeniopygia
guttata]
Length = 215
Score = 185 bits (470), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 87/178 (48%), Positives = 123/178 (69%)
Query: 22 PDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQI 81
P Y+FK ++IGD VGKS +L +F + +F D TIGVEF TR + ++G+ IK QI
Sbjct: 5 PYNYSYIFKYIIIGDMGVGKSCLLHQFAEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQI 64
Query: 82 WDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGN 141
WDTAGQER+RAVT +YYRGA GA++VYDIT+R +++H++ W+ + R + + IILIGN
Sbjct: 65 WDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGN 124
Query: 142 KSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELE 199
K+DL R V+ E+A +FAE+ GL F EASA G+NV+ AF ++IY + L+
Sbjct: 125 KADLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQNIQDGSLD 182
>gi|332029969|gb|EGI69794.1| Ras-related protein Rab-14 [Acromyrmex echinatior]
Length = 218
Score = 185 bits (470), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 87/178 (48%), Positives = 122/178 (68%)
Query: 22 PDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQI 81
P Y+FK ++IGD VGKS +L +FT+ +F D TIGVEF TR + + G+ IK QI
Sbjct: 5 PYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVAGQKIKLQI 64
Query: 82 WDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGN 141
WDTAGQER+RAVT +YYRGA GA++VYDIT+R +++H++ W+ + R + S I LIGN
Sbjct: 65 WDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTRNLTNPSTVIFLIGN 124
Query: 142 KSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELE 199
KSDL R V+ E+A +FA++ GL F EASA G NV+ AF ++I+ ++ L+
Sbjct: 125 KSDLEGQRDVTYEEAKQFADEHGLMFVEASAKTGHNVEEAFLETAKKIFQSIQDGRLD 182
>gi|378755008|gb|EHY65036.1| GTP-binding protein ypt3 [Nematocida sp. 1 ERTm2]
Length = 210
Score = 185 bits (469), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 91/181 (50%), Positives = 132/181 (72%), Gaps = 7/181 (3%)
Query: 11 DHRHQQQENMIPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTV 70
+ R ++QE +Y++K+V+IGDS VGK+ +L R N F ++KSTIGVEF T+
Sbjct: 4 NMRREEQE------YEYLYKIVLIGDSGVGKTNLLERLAHNRFNTNTKSTIGVEFDTKCF 57
Query: 71 TINGKIIKAQIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHV-ARWVEELRAH 129
+NGK IKAQIWDTAGQERYRA+TSAYYRGA+GA+VVYDI+++++FD+ W+++L+ +
Sbjct: 58 VVNGKKIKAQIWDTAGQERYRAITSAYYRGAVGAIVVYDISRKETFDNARTEWIKQLKDN 117
Query: 130 ADSSIRIILIGNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEI 189
++S + I L+GNK+DL + R VS ++A E A+ G +E SAL+ NV AF L+Q+I
Sbjct: 118 SESGLVISLVGNKTDLNEKRQVSLQEAREAAQIGGYQLTETSALSDVNVQEAFETLIQKI 177
Query: 190 Y 190
Y
Sbjct: 178 Y 178
>gi|16755592|gb|AAL28022.1| small GTPase Rab2 [Nicotiana tabacum]
Length = 211
Score = 185 bits (469), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 91/191 (47%), Positives = 126/191 (65%), Gaps = 9/191 (4%)
Query: 27 YVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTAG 86
Y+FK ++IGD+ VGKS +L +FT F TIGVEF R +TI+ K IK QIWDTAG
Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAG 64
Query: 87 QERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDLV 146
QE +R++T +YYRGA GA++VYDIT+R++F+H+A W+E+ R HA++++ I+LIGNK DL
Sbjct: 65 QESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLA 124
Query: 147 DMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVS---------KKE 197
RAVS E+ +FA++ GL F EASA NV+ AF R IY +
Sbjct: 125 HRRAVSTEEGEQFAKENGLIFMEASAKTAQNVEEAFIRTASTIYKKIQDGVFDVSNESYG 184
Query: 198 LECGNGKVDGP 208
++ G G + GP
Sbjct: 185 IKVGYGGIPGP 195
>gi|118401353|ref|XP_001032997.1| Ras family protein [Tetrahymena thermophila]
gi|89287343|gb|EAR85334.1| Ras family protein [Tetrahymena thermophila SB210]
gi|307777820|dbj|BAJ21306.1| Rab-family small GTPase Rab11I [Tetrahymena thermophila]
Length = 225
Score = 185 bits (469), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 81/172 (47%), Positives = 128/172 (74%), Gaps = 1/172 (0%)
Query: 24 KIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWD 83
++DY FK+++IGDS VGK+ I++RFT+N+F + KSTIGVE+ +T+ I+ +I+A IWD
Sbjct: 12 QLDYQFKILLIGDSGVGKTSIMNRFTENKFNVEIKSTIGVEYSKKTMVIDQAVIQASIWD 71
Query: 84 TAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVAR-WVEELRAHADSSIRIILIGNK 142
TAGQER+R++ YY+GA+GA++V+D+T+ + +++ + W++E+ HA +I++ILIGNK
Sbjct: 72 TAGQERFRSLAKNYYKGAIGALLVFDVTRPHTLENIQKIWLQEVEQHASKNIKMILIGNK 131
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVS 194
SDL R V E+AV F++ L + E SALN N+D AF L++EIY ++
Sbjct: 132 SDLTVERIVKQEEAVNFSKTNNLAYMETSALNNQNIDQAFETLVREIYSEIN 183
>gi|66813122|ref|XP_640740.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|110282987|sp|P36410.2|RAB14_DICDI RecName: Full=Ras-related protein Rab-14; AltName: Full=Rab4-like
GTPase
gi|60468753|gb|EAL66754.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 206
Score = 185 bits (469), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 91/186 (48%), Positives = 126/186 (67%), Gaps = 2/186 (1%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
+Y+FK ++IGD VGKS +L +FT+N+F DS TIGVEF TR V +N K IK QIWDTA
Sbjct: 6 EYIFKYIIIGDMGVGKSCLLHQFTENKFVPDSPHTIGVEFGTRIVDVNNKKIKLQIWDTA 65
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQER+RAVT +YYRGA GA++VYDIT+R +++H+ W+ + R + + I+LIGNK DL
Sbjct: 66 GQERFRAVTRSYYRGAAGALLVYDITRRITYNHLTTWLTDARNLTNPNTVIMLIGNKKDL 125
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELEC--GNG 203
R V+ E+A FA+ GL F E+SA G+NV+ AF R + I+ +V + ++ G
Sbjct: 126 EGQRDVTYEEASAFAKQNGLIFVESSAKTGENVEEAFLRTAKLIFQSVQEGNVDLIPDGG 185
Query: 204 KVDGPP 209
PP
Sbjct: 186 ITKNPP 191
>gi|66557450|ref|XP_397056.2| PREDICTED: ras-related protein Rab-14 isoform 1 [Apis mellifera]
gi|340722550|ref|XP_003399667.1| PREDICTED: ras-related protein Rab-14-like [Bombus terrestris]
gi|350418542|ref|XP_003491891.1| PREDICTED: ras-related protein Rab-14-like [Bombus impatiens]
gi|380012102|ref|XP_003690127.1| PREDICTED: ras-related protein Rab-14-like [Apis florea]
Length = 218
Score = 184 bits (468), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 87/178 (48%), Positives = 122/178 (68%)
Query: 22 PDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQI 81
P Y+FK ++IGD VGKS +L +FT+ +F D TIGVEF TR + + G+ IK QI
Sbjct: 5 PYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVAGQKIKLQI 64
Query: 82 WDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGN 141
WDTAGQER+RAVT +YYRGA GA++VYDIT+R +++H++ W+ + R + S I LIGN
Sbjct: 65 WDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTRNLTNPSTVIFLIGN 124
Query: 142 KSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELE 199
KSDL R V+ E+A +FA++ GL F EASA G NV+ AF ++I+ ++ L+
Sbjct: 125 KSDLEGQRDVTYEEAKQFADENGLMFVEASAKTGHNVEEAFLETAKKIFQSIQDGRLD 182
>gi|392887275|ref|NP_001251691.1| Protein RAB-11.2, isoform a [Caenorhabditis elegans]
gi|90185954|emb|CAJ85753.1| Protein RAB-11.2, isoform a [Caenorhabditis elegans]
Length = 198
Score = 184 bits (468), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 89/170 (52%), Positives = 123/170 (72%), Gaps = 2/170 (1%)
Query: 27 YVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTAG 86
Y+FK+V+IG+ VGKS +LSRFT+NEF SK TIGVEF T+ +++ GK +K QIWDTAG
Sbjct: 7 YLFKIVLIGNPGVGKSNLLSRFTRNEFNLKSKPTIGVEFATKIISVEGKAVKVQIWDTAG 66
Query: 87 QERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDLV 146
ER+R S+YYRGALGA++VYDI+K ++++ V +W++ LR HA+ I I L+GNKSDL
Sbjct: 67 MERFRCGASSYYRGALGALLVYDISKHKTYESVEQWLKVLRDHANEDIVITLVGNKSDL- 125
Query: 147 DMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKK 196
AV ++A +AE + F E SAL+ NV+ AF ++ EIY VS+K
Sbjct: 126 -SHAVPTDEAKIYAERNHISFIETSALDNTNVEAAFTNIVTEIYKLVSEK 174
>gi|383863388|ref|XP_003707163.1| PREDICTED: ras-related protein Rab-14-like [Megachile rotundata]
Length = 218
Score = 184 bits (468), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 87/178 (48%), Positives = 122/178 (68%)
Query: 22 PDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQI 81
P Y+FK ++IGD VGKS +L +FT+ +F D TIGVEF TR + + G+ IK QI
Sbjct: 5 PYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVAGQKIKLQI 64
Query: 82 WDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGN 141
WDTAGQER+RAVT +YYRGA GA++VYDIT+R +++H++ W+ + R + S I LIGN
Sbjct: 65 WDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTRNLTNPSTVIFLIGN 124
Query: 142 KSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELE 199
KSDL R V+ E+A +FA++ GL F EASA G NV+ AF ++I+ ++ L+
Sbjct: 125 KSDLEGQRDVTYEEAKQFADENGLMFVEASAKTGHNVEEAFLETAKKIFQSIQDGRLD 182
>gi|321452621|gb|EFX63965.1| hypothetical protein DAPPUDRAFT_231914 [Daphnia pulex]
Length = 215
Score = 184 bits (468), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 88/178 (49%), Positives = 121/178 (67%)
Query: 22 PDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQI 81
P Y+FK ++IGD VGKS +L +FT+ +F D TIGVEF TR + + G+ IK QI
Sbjct: 5 PYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVAGQKIKLQI 64
Query: 82 WDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGN 141
WDTAGQER+RAVT +YYRGA GA++VYDIT+R +++H++ W+ + R + + I LIGN
Sbjct: 65 WDTAGQERFRAVTRSYYRGAAGALLVYDITRRSTYNHLSSWLSDARNLTNPNTVIFLIGN 124
Query: 142 KSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELE 199
KSDL R V+ E+A +FAE+ L F EASA GDNV+ AF ++IY + L+
Sbjct: 125 KSDLEAQRDVTYEEAKQFAEENELLFIEASAKTGDNVEDAFLETAKKIYQNIQDGSLD 182
>gi|405963182|gb|EKC28779.1| Ras-related protein Rab-14 [Crassostrea gigas]
Length = 214
Score = 184 bits (468), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 87/178 (48%), Positives = 122/178 (68%)
Query: 22 PDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQI 81
P Y+FK ++IGD VGKS +L +FT+ +F D TIGVEF TR + ++G+ IK QI
Sbjct: 5 PYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQI 64
Query: 82 WDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGN 141
WDTAGQER+RAVT +YYRGA GA++VYDIT+R +++H++ W+ + R + + I LIGN
Sbjct: 65 WDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIFLIGN 124
Query: 142 KSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELE 199
KSDL R V+ E+A +FA++ GL F E SA GDNV+ AF ++IY + L+
Sbjct: 125 KSDLEAQRDVTYEEAKQFADENGLMFLECSAKTGDNVEDAFLDTAKKIYQNIQDGSLD 182
>gi|63087691|emb|CAI92127.1| RAB14 protein [Mus musculus]
Length = 215
Score = 184 bits (468), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 87/178 (48%), Positives = 123/178 (69%)
Query: 22 PDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQI 81
P Y+FK ++IGD VGKS +L +FT+ +F D TIGVEF TR + ++G+ IK QI
Sbjct: 5 PYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQI 64
Query: 82 WDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGN 141
WDTAGQ R+RAVT +YYRGA GA++VYDIT+R +++H++ W+ + R + + IILIGN
Sbjct: 65 WDTAGQGRFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGN 124
Query: 142 KSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELE 199
K+DL R V+ E+A +FAE+ GL F EASA G+NV+ AF ++IY + L+
Sbjct: 125 KADLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQNIQDGSLD 182
>gi|449455912|ref|XP_004145694.1| PREDICTED: ras-related protein RABB1b-like [Cucumis sativus]
gi|449492910|ref|XP_004159138.1| PREDICTED: ras-related protein RABB1b-like [Cucumis sativus]
Length = 211
Score = 184 bits (468), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 92/192 (47%), Positives = 129/192 (67%), Gaps = 9/192 (4%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
DY+FK ++IGD+ VGKS +L +FT F TIGVEF R VTI+ + IK QIWDTA
Sbjct: 4 DYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDARPIKLQIWDTA 63
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQE +R++T +YYRGA GA++VYDIT+R++F+H+A W+E+ R HA+ ++ I+L+GNK+DL
Sbjct: 64 GQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIMLVGNKADL 123
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFF----RLLQEIYGAV-----SKK 196
RAVS E+ +FA++ GL F EASA NV+ AF ++LQ I V
Sbjct: 124 AHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGVFDVSNESS 183
Query: 197 ELECGNGKVDGP 208
++ G G+ GP
Sbjct: 184 GIKVGYGRPQGP 195
>gi|388514081|gb|AFK45102.1| unknown [Lotus japonicus]
Length = 211
Score = 184 bits (468), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 91/191 (47%), Positives = 126/191 (65%), Gaps = 9/191 (4%)
Query: 27 YVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTAG 86
Y+FK ++IGD+ VGKS +L +FT F TIGVEF R +TI+ K IK QIWDTAG
Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAG 64
Query: 87 QERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDLV 146
QE +R++T +YYRGA GA++VYDIT+R++F+H+A W+E+ R HA++++ I+LIGNK DL
Sbjct: 65 QESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLA 124
Query: 147 DMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVS---------KKE 197
RAVS E+ +FA+D GL F EASA NV+ AF + IY +
Sbjct: 125 HRRAVSTEEGEQFAKDLGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSNESYG 184
Query: 198 LECGNGKVDGP 208
++ G G + GP
Sbjct: 185 IKVGYGGIPGP 195
>gi|268567488|ref|XP_002647794.1| Hypothetical protein CBG23562 [Caenorhabditis briggsae]
Length = 153
Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 86/146 (58%), Positives = 116/146 (79%), Gaps = 1/146 (0%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
++ DY+FKVV++GDS VGKS +LSRFT+N F ++KSTIGVEF TR++ I GK IKA IW
Sbjct: 7 EEYDYLFKVVLVGDSGVGKSNLLSRFTRNTFDLETKSTIGVEFATRSMMIEGKKIKATIW 66
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHAD-SSIRIILIGN 141
DTAGQERYRA+T AYYRGALG ++VYDI K Q+F ++ +W++ELR HAD S+I I+L+GN
Sbjct: 67 DTAGQERYRAITPAYYRGALGILIVYDIAKHQTFQNIDQWLKELRNHADESNISIMLVGN 126
Query: 142 KSDLVDMRAVSAEDAVEFAEDQGLFF 167
K+DL +RAV ++A +A+ + F
Sbjct: 127 KTDLRHLRAVPTQEAAIYADRNHMSF 152
>gi|224124750|ref|XP_002329939.1| predicted protein [Populus trichocarpa]
gi|118484431|gb|ABK94092.1| unknown [Populus trichocarpa]
gi|222871961|gb|EEF09092.1| predicted protein [Populus trichocarpa]
Length = 211
Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 87/164 (53%), Positives = 119/164 (72%)
Query: 27 YVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTAG 86
Y+FK ++IGD+ VGKS +L +FT F TIGVEF R +TI+ K IK QIWDTAG
Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAG 64
Query: 87 QERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDLV 146
QE +R++T +YYRGA GA++VYDIT+R++F+H+A W+E+ R HA++++ I+LIGNKSDL
Sbjct: 65 QESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKSDLA 124
Query: 147 DMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIY 190
RAVS E+ +FA++ GL F EASA NV+ AF + IY
Sbjct: 125 HRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIY 168
>gi|290977760|ref|XP_002671605.1| rab family small GTPase [Naegleria gruberi]
gi|284085175|gb|EFC38861.1| rab family small GTPase [Naegleria gruberi]
Length = 212
Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 88/165 (53%), Positives = 114/165 (69%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
+Y+FK ++IGD VGKS +L +FT+ +F D TIGVEF TR + + GK IK QIWDTA
Sbjct: 5 EYIFKYIIIGDMGVGKSCLLHQFTEQKFQSDCPHTIGVEFGTRVIEVEGKSIKLQIWDTA 64
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQER+RAVT +YYRGA GA++VYDIT+R +F H+A W+ + R + I+LIGNKSDL
Sbjct: 65 GQERFRAVTRSYYRGAAGALMVYDITRRNTFHHLASWLTDARNLTNPHTIIVLIGNKSDL 124
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIY 190
D R VS E+A FA++ GL + E SA G+NV AF IY
Sbjct: 125 EDQRQVSFEEASRFAKENGLVYVETSAKTGENVTKAFMETASRIY 169
>gi|440297845|gb|ELP90486.1| rab11, putative [Entamoeba invadens IP1]
Length = 222
Score = 184 bits (467), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 88/164 (53%), Positives = 116/164 (70%)
Query: 27 YVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTAG 86
+ +VV+IG+S VGKS +L RFT+NE+ + K TIGVEF TRT+ +GK I+AQIWDTAG
Sbjct: 21 FSLEVVIIGESGVGKSNLLLRFTRNEYEPEKKFTIGVEFATRTIEYDGKTIRAQIWDTAG 80
Query: 87 QERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDLV 146
QE+YRA+T AYYRGA GAV VYD++K+ +F + RW+ EL+A + I+++GNKSDL
Sbjct: 81 QEKYRAITDAYYRGAEGAVCVYDVSKKDTFTAIDRWMTELKAGCGDDVVIMIVGNKSDLE 140
Query: 147 DMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIY 190
R V + EFA+ FF E SAL G+NV+ AF LL IY
Sbjct: 141 QERDVKPSEGEEFAQRHNSFFMETSALTGNNVEKAFTELLVHIY 184
>gi|356555789|ref|XP_003546212.1| PREDICTED: ras-related protein RABB1c-like [Glycine max]
gi|1370176|emb|CAA98165.1| RAB2A [Lotus japonicus]
Length = 211
Score = 184 bits (467), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 90/191 (47%), Positives = 126/191 (65%), Gaps = 9/191 (4%)
Query: 27 YVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTAG 86
Y+FK ++IGD+ VGKS +L +FT F TIGVEF R +TI+ K IK QIWDTAG
Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAG 64
Query: 87 QERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDLV 146
QE +R++T +YYRGA GA++VYDIT+R++F+H+A W+E+ R HA++++ I+LIGNK DL
Sbjct: 65 QESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLA 124
Query: 147 DMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVS---------KKE 197
RAVS E+ +FA++ GL F EASA NV+ AF + IY +
Sbjct: 125 HRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSNESYG 184
Query: 198 LECGNGKVDGP 208
++ G G + GP
Sbjct: 185 IKVGYGGIPGP 195
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.133 0.375
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,455,960,640
Number of Sequences: 23463169
Number of extensions: 132590416
Number of successful extensions: 405917
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 15988
Number of HSP's successfully gapped in prelim test: 8512
Number of HSP's that attempted gapping in prelim test: 371287
Number of HSP's gapped (non-prelim): 25901
length of query: 237
length of database: 8,064,228,071
effective HSP length: 138
effective length of query: 99
effective length of database: 9,121,278,045
effective search space: 903006526455
effective search space used: 903006526455
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 74 (33.1 bits)