BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026548
(237 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LNK1|RABA3_ARATH Ras-related protein RABA3 OS=Arabidopsis thaliana GN=RABA3 PE=2
SV=1
Length = 237
Score = 333 bits (853), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 167/240 (69%), Positives = 197/240 (82%), Gaps = 6/240 (2%)
Query: 1 MNEEMSGDATDHRHQQQENMIPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKST 60
MNEEMSG++ ++ ++ +P+KIDYVFKVVVIGDSAVGK+Q+LSRFT NEF +DSKST
Sbjct: 1 MNEEMSGESPENNKHVKKPTMPEKIDYVFKVVVIGDSAVGKTQLLSRFTHNEFCYDSKST 60
Query: 61 IGVEFQTRTVTINGKIIKAQIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVA 120
IGVEFQTRT+T+ GK++KAQIWDTAGQERYRAVTSAYYRGALGA+VVYDITKR SFDHVA
Sbjct: 61 IGVEFQTRTITLRGKLVKAQIWDTAGQERYRAVTSAYYRGALGAMVVYDITKRLSFDHVA 120
Query: 121 RWVEELRAHADSSIRIILIGNKSDL-VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVD 179
RWVEELRAHAD S I+L+GNK+DL V RAV EDAVEFAE Q LFFSE SAL+G NVD
Sbjct: 121 RWVEELRAHADDSAVIMLVGNKADLSVGKRAVPTEDAVEFAETQRLFFSEVSALSGGNVD 180
Query: 180 TAFFRLLQEIYG--AVSKKELECGNGKVDGPPMLAGSKIDVISGADLEISEMKKLSTCSC 237
AFFRLL+EI+ VS+K +E G L GS+IDVISG+DLE S +K+ ++CSC
Sbjct: 181 EAFFRLLEEIFSRVVVSRKAMESDGG---ATVKLDGSRIDVISGSDLETSNIKEQASCSC 237
>sp|Q9FJN8|RAA4A_ARATH Ras-related protein RABA4a OS=Arabidopsis thaliana GN=RABA4A PE=2
SV=1
Length = 226
Score = 279 bits (713), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 135/200 (67%), Positives = 163/200 (81%), Gaps = 1/200 (0%)
Query: 24 KIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWD 83
KIDYVFKVV+IGDSAVGKSQIL+R+ ++EF DSK+TIGVEFQTRT+ I+ K +KAQIWD
Sbjct: 13 KIDYVFKVVLIGDSAVGKSQILARYARDEFSLDSKATIGVEFQTRTLVIDHKSVKAQIWD 72
Query: 84 TAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKS 143
TAGQERYRAVTSAYYRGA+GA++VYDIT+RQ+FDH+ RW+EELRAHAD +I IILIGNKS
Sbjct: 73 TAGQERYRAVTSAYYRGAVGAMLVYDITRRQTFDHIPRWLEELRAHADKNIVIILIGNKS 132
Query: 144 DLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNG 203
DLVD RA+ EDA EFAE +GLFF E SA N NV++AF +L EI+ V+KK L
Sbjct: 133 DLVDQRAIPTEDAKEFAEKEGLFFLETSAFNATNVESAFSTVLTEIFNIVNKKSLAASED 192
Query: 204 KVDGPP-MLAGSKIDVISGA 222
+ +G P LAG KID++ G
Sbjct: 193 QENGNPGSLAGKKIDIVPGP 212
>sp|Q9SMQ6|RAA4B_ARATH Ras-related protein RABA4b OS=Arabidopsis thaliana GN=RABA4B PE=2
SV=1
Length = 224
Score = 277 bits (708), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 139/212 (65%), Positives = 167/212 (78%), Gaps = 4/212 (1%)
Query: 24 KIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWD 83
K+DYVFKVV+IGDSAVGKSQ+L+RF ++EF DSK+TIGVEFQTRT++I K IKAQIWD
Sbjct: 13 KVDYVFKVVLIGDSAVGKSQLLARFARDEFSMDSKATIGVEFQTRTLSIEQKSIKAQIWD 72
Query: 84 TAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKS 143
TAGQERYRAVTSAYYRGA+GA++VYD+TKR++F+H+ RW+EELRAHAD +I IILIGNKS
Sbjct: 73 TAGQERYRAVTSAYYRGAVGAMLVYDMTKRETFEHIPRWLEELRAHADKNIVIILIGNKS 132
Query: 144 DLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNG 203
DL D RAV EDA EFAE +GLFF E SALN NV+ +F L+ +IY V+KK L G
Sbjct: 133 DLEDQRAVPTEDAKEFAEKEGLFFLETSALNATNVENSFNTLMTQIYNTVNKKNL-ASEG 191
Query: 204 KVDGPPMLAGSKIDVISGADLEISEMKKLSTC 235
+ P LAG KI +I G+ EI K STC
Sbjct: 192 DSNNPGSLAGKKI-LIPGSGQEIP--AKTSTC 220
>sp|Q40522|RB11D_TOBAC Ras-related protein Rab11D OS=Nicotiana tabacum GN=RAB11D PE=2 SV=1
Length = 222
Score = 271 bits (693), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 136/214 (63%), Positives = 165/214 (77%), Gaps = 4/214 (1%)
Query: 24 KIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWD 83
KIDYVFKVV+IGDSAVGKSQIL+RF +NEF DSK+TIGVEFQTRT+ I K +KAQIWD
Sbjct: 11 KIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLAIQHKSVKAQIWD 70
Query: 84 TAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKS 143
TAGQERYRAVTSAYYRGA+GA++VYDITKRQ+FDH+ RW+EELRAHAD +I I+LIGNK+
Sbjct: 71 TAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRAHADRNIVIMLIGNKT 130
Query: 144 DLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNG 203
DL D RAV EDA EFA+ +GLFF E SA+ N++ AF +L EI+ V+KK L +
Sbjct: 131 DLEDQRAVPTEDAKEFAQKEGLFFLETSAMEATNLEDAFLTVLTEIFNIVNKKNLAADDN 190
Query: 204 KVDG-PPMLAGSKIDVISGADLEISEMKKLSTCS 236
+ +G P L G KI ++ G I E K + CS
Sbjct: 191 QSNGNPASLTGKKI-LVPGPGQVIPEKK--ACCS 221
>sp|Q40191|RB11A_LOTJA Ras-related protein Rab11A OS=Lotus japonicus GN=RAB11A PE=2 SV=1
Length = 226
Score = 270 bits (691), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 137/210 (65%), Positives = 162/210 (77%), Gaps = 2/210 (0%)
Query: 24 KIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWD 83
KIDYVFKVV+IGDSAVGKSQIL+RF +NEF DSKSTIGVEFQTRT+ I+ K +KAQIWD
Sbjct: 13 KIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKSTIGVEFQTRTLVIDHKTVKAQIWD 72
Query: 84 TAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKS 143
TAGQERYRAVTSAYYRGA+GA++VYDITKRQ+FDH+ RW+EELR HAD +I IILIGNK
Sbjct: 73 TAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHADKNIVIILIGNKC 132
Query: 144 DLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNG 203
DLV+ R V EDA EFAE +GLFF E SAL NV++AF +L EIY V+KK L
Sbjct: 133 DLVNQRDVPTEDAKEFAEKEGLFFLETSALEATNVESAFTTVLTEIYNIVNKKSLAADES 192
Query: 204 KVDG-PPMLAGSKIDVISGADLEISEMKKL 232
+ +G L+G KI +I G EI + +
Sbjct: 193 QGNGNSASLSGQKI-IIPGPAQEIPAKRNM 221
>sp|P25766|RLGP1_ORYSJ Ras-related protein RGP1 OS=Oryza sativa subsp. japonica GN=RGP1
PE=2 SV=2
Length = 226
Score = 268 bits (686), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 140/218 (64%), Positives = 165/218 (75%), Gaps = 7/218 (3%)
Query: 21 IPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQ 80
+ KIDYVFKVV+IGDSAVGKSQ+L+RF +NEF DSK+TIGVEFQTRT+ I+ + +KAQ
Sbjct: 11 VGQKIDYVFKVVLIGDSAVGKSQLLARFARNEFNLDSKATIGVEFQTRTLHIDARTVKAQ 70
Query: 81 IWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIG 140
IWDTAGQERYRAVTSAYYRGA+GA++VYDITKRQSFDHVARW+EELR HAD +I I+LIG
Sbjct: 71 IWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKNIVIMLIG 130
Query: 141 NKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELEC 200
NKSDL +R V EDA EFAE + LFF E SAL NV+ AF +L EIY VSKK L
Sbjct: 131 NKSDLGTLRVVPTEDAKEFAERENLFFMETSALESTNVENAFMTVLTEIYRIVSKKNL-V 189
Query: 201 GNGKVD---GPPMLAGSKIDVISGADLEISEMKKLSTC 235
N +VD +L G+KI V+ G E + K S C
Sbjct: 190 ANEEVDSSGNSSLLKGTKI-VVPGQ--EPAPPTKASCC 224
>sp|Q9FE79|RAA4C_ARATH Ras-related protein RABA4c OS=Arabidopsis thaliana GN=RABA4C PE=2
SV=1
Length = 223
Score = 266 bits (679), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 134/204 (65%), Positives = 163/204 (79%), Gaps = 3/204 (1%)
Query: 24 KIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWD 83
KIDYVFKVV+IGDSAVGKSQ+L+RF++NEF +SK+TIGVEFQTRT+ I+ K IKAQIWD
Sbjct: 11 KIDYVFKVVLIGDSAVGKSQLLARFSRNEFSIESKATIGVEFQTRTLEIDRKTIKAQIWD 70
Query: 84 TAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKS 143
TAGQERYRAVTSAYYRGA+GA++VYDITKRQSFDHVARW+EELR HAD +I I+LIGNK+
Sbjct: 71 TAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKNIVIMLIGNKT 130
Query: 144 DLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNG 203
DL +RAV EDA EFA+ + LFF E SAL+ +NV+ +F +L EIY VSKK L
Sbjct: 131 DLGTLRAVPTEDAKEFAQRENLFFMETSALDSNNVEPSFLTVLTEIYRIVSKKNLVANEE 190
Query: 204 KVDG--PPMLAGSKIDVISGADLE 225
G +L G+KI V++G + E
Sbjct: 191 GESGGDSSLLQGTKI-VVAGEETE 213
>sp|Q9LH50|RAA4D_ARATH Ras-related protein RABA4d OS=Arabidopsis thaliana GN=RABA4D PE=1
SV=1
Length = 222
Score = 264 bits (675), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 128/198 (64%), Positives = 158/198 (79%), Gaps = 1/198 (0%)
Query: 24 KIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWD 83
KIDYVFKVV+IGDSAVGK+Q+L+RF +NEF DSK+TIGVEFQT+T+ I+ K +KAQIWD
Sbjct: 11 KIDYVFKVVLIGDSAVGKTQLLARFARNEFSVDSKATIGVEFQTKTLVIDNKTVKAQIWD 70
Query: 84 TAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKS 143
TAGQERYRAVTSAYYRGA+GA++VYD+TKRQSFDH+A+W+EELR HAD +I I+LIGNK
Sbjct: 71 TAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMAKWLEELRGHADKNIVIMLIGNKC 130
Query: 144 DLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNG 203
DL +RAV EDA EFA+ + LFF E SAL NV+TAF +L EIY +SKK L +
Sbjct: 131 DLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTILTEIYRIISKKSLTADDD 190
Query: 204 KVDG-PPMLAGSKIDVIS 220
DG +L G++I + S
Sbjct: 191 DADGNSSLLKGTRIIIPS 208
>sp|Q40520|RB11C_TOBAC Ras-related protein Rab11C OS=Nicotiana tabacum GN=RAB11C PE=2 SV=1
Length = 222
Score = 261 bits (666), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 128/196 (65%), Positives = 152/196 (77%), Gaps = 1/196 (0%)
Query: 24 KIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWD 83
KIDYVFKVV+IGDSAVGK+QIL+RF +NEF DSK+TIGVEFQTRT+ I K +KAQIWD
Sbjct: 11 KIDYVFKVVLIGDSAVGKTQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWD 70
Query: 84 TAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKS 143
TAGQERYRAVTSAYYRGA+GA++VYDITKRQ+FDH+ RW+EELRAHAD +I I+L GNK+
Sbjct: 71 TAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRAHADRNIVIMLTGNKT 130
Query: 144 DLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECG-N 202
DL D RAV EDA EFA+ +GLFF E SA+ ++ AF +L EI+ V+KK L N
Sbjct: 131 DLEDQRAVPTEDAKEFAQKEGLFFLETSAMEATKLEDAFLTVLTEIFNIVNKKNLAADEN 190
Query: 203 GKVDGPPMLAGSKIDV 218
P L G KI V
Sbjct: 191 QSNSNPASLTGKKILV 206
>sp|Q9SN35|RAA1D_ARATH Ras-related protein RABA1d OS=Arabidopsis thaliana GN=RABA1D PE=2
SV=1
Length = 214
Score = 246 bits (627), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 121/214 (56%), Positives = 156/214 (72%), Gaps = 8/214 (3%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ +N K+IKAQIW
Sbjct: 8 DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVNEKVIKAQIW 67
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYD+T+ +F++V RW+ ELR H D +I ++L+GNK
Sbjct: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLVGNK 127
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
SDL + AV EDA FAE++ L+F E SAL NV+ AF +L +IY VSKK +E G
Sbjct: 128 SDLRHLVAVQTEDAKSFAENESLYFMETSALESTNVENAFSEVLTQIYHVVSKKAMEAGE 187
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
+ P G KIDV ++S +KK CS
Sbjct: 188 DSGNVPS--KGEKIDV------DVSAVKKTGCCS 213
>sp|Q39434|RB2BV_BETVU Ras-related protein Rab2BV OS=Beta vulgaris GN=RAB2BV PE=2 SV=1
Length = 214
Score = 244 bits (624), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 124/218 (56%), Positives = 156/218 (71%), Gaps = 7/218 (3%)
Query: 19 NMIPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIK 78
N + + DY+FK+V+IGDS VGKS ILSRFT+NEF +SKSTIGVEF TRT+ + GK +K
Sbjct: 3 NRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVK 62
Query: 79 AQIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIIL 138
AQIWDTAGQERYRA+TSAYYRGA+GA++VYDITKRQ+FD+V RW+ ELR HADS+I I++
Sbjct: 63 AQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMM 122
Query: 139 IGNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL 198
GNKSDL +RAVS ED AE +GL F E SAL N++ AF +L EIY +SKK L
Sbjct: 123 AGNKSDLKHLRAVSEEDGQALAEKEGLSFLETSALEAVNIEKAFQTILTEIYHIISKKAL 182
Query: 199 ECGNGKVDGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
+ P G+ I+V + S ++ S CS
Sbjct: 183 AAQEASSNLPGQ--GTTINVA-----DASANQRRSCCS 213
>sp|Q39222|RAA1B_ARATH Ras-related protein RABA1b OS=Arabidopsis thaliana GN=RABA1B PE=2
SV=1
Length = 216
Score = 243 bits (619), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 120/217 (55%), Positives = 160/217 (73%), Gaps = 8/217 (3%)
Query: 21 IPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQ 80
+ D DY+FKVV+IGDS VGKS +LSRFTKNEF +SKSTIGVEF TRT+ ++GK++KAQ
Sbjct: 6 VEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDGKVVKAQ 65
Query: 81 IWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIG 140
IWDTAGQERYRA+TSAYYRGA+GA++VYD+T+R +F++V RW++EL+ H D +I ++L+G
Sbjct: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENVDRWLKELKNHTDPNIVVMLVG 125
Query: 141 NKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELEC 200
NKSDL + AV ED +AE + L F E SAL NV+ AF +L +IY SKK++E
Sbjct: 126 NKSDLRHLLAVPTEDGKSYAEQESLCFMETSALEATNVEDAFAEVLTQIYRITSKKQVEA 185
Query: 201 G-NGKVDGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
G +G P G KI+V + ++S +KKL CS
Sbjct: 186 GEDGNASVPK---GEKIEVKN----DVSALKKLGCCS 215
>sp|Q9FJH0|RAA1F_ARATH Ras-related protein RABA1f OS=Arabidopsis thaliana GN=RABA1F PE=2
SV=1
Length = 217
Score = 242 bits (617), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 119/214 (55%), Positives = 161/214 (75%), Gaps = 5/214 (2%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++ KI+KAQIW
Sbjct: 8 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKIVKAQIW 67
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYD+T+ +F++V RW++ELR H D++I I+ +GNK
Sbjct: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMFVGNK 127
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
+DL +RAVS EDA FAE + FF E SAL NV+ AF +L +IY VS+K L+ G+
Sbjct: 128 ADLRHLRAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLSQIYRVVSRKALDIGD 187
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
D + G I+V G+ ++S +KK+ CS
Sbjct: 188 ---DPAALPKGQTINV--GSKDDVSAVKKVGCCS 216
>sp|Q40521|RB11B_TOBAC Ras-related protein Rab11B OS=Nicotiana tabacum GN=RAB11B PE=2 SV=1
Length = 217
Score = 241 bits (615), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 122/214 (57%), Positives = 159/214 (74%), Gaps = 6/214 (2%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D DY+FK+V+IGDS VGKS +LSRF++NEF +SKSTIGVEF TR++ ++ KI+KAQIW
Sbjct: 9 DDYDYLFKLVLIGDSGVGKSNLLSRFSRNEFNLESKSTIGVEFATRSIRVDDKIVKAQIW 68
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA+VVYDIT+ +F++V RW++ELR H D +I I+L+GNK
Sbjct: 69 DTAGQERYRAITSAYYRGAVGALVVYDITRHVTFENVERWLKELRDHTDQNIVIMLVGNK 128
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
+DL +RAVS EDA FAE + FF E SAL NV+ AF +L EIY V +K LE G+
Sbjct: 129 ADLRHLRAVSTEDAKAFAERENTFFMETSALESLNVENAFTEVLTEIYKVVCRKALEVGD 188
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
D + G I+V G D ++S +KK+ CS
Sbjct: 189 ---DPAALPKGQTINV--GKD-DVSAVKKVGCCS 216
>sp|Q9LK99|RAA1G_ARATH Ras-related protein RABA1g OS=Arabidopsis thaliana GN=RABA1G PE=2
SV=1
Length = 217
Score = 240 bits (612), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 118/214 (55%), Positives = 161/214 (75%), Gaps = 5/214 (2%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D D+++KVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++ KI+KAQIW
Sbjct: 8 DDYDFLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDEKIVKAQIW 67
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYD+T+ +F++V RW++ELR H +++I I+L+GNK
Sbjct: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTEANIVIMLVGNK 127
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
+DL +RAVS EDA FAE + FF E SAL NV+ AF +L +IY SKK L+ G+
Sbjct: 128 ADLRHLRAVSTEDAKAFAERENTFFMETSALEALNVENAFTEVLSQIYRVASKKALDIGD 187
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
D + G I+V G+ ++SE+KK+ CS
Sbjct: 188 ---DHTTLPKGQSINV--GSKDDVSEVKKVGCCS 216
>sp|Q9LNW1|RAA2B_ARATH Ras-related protein RABA2b OS=Arabidopsis thaliana GN=RABA2B PE=2
SV=2
Length = 214
Score = 239 bits (611), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 117/200 (58%), Positives = 149/200 (74%), Gaps = 2/200 (1%)
Query: 19 NMIPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIK 78
N I + DY+FK+V+IGDS VGKS ILSRFT+NEF +SKSTIGVEF TRT+ + GK +K
Sbjct: 3 NRIDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVK 62
Query: 79 AQIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIIL 138
AQIWDTAGQERYRA+TSAYYRGA+GA++VYDITKRQ+F++V RW+ ELR HADS+I I++
Sbjct: 63 AQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFENVLRWLRELRDHADSNIVIMM 122
Query: 139 IGNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL 198
GNKSDL +R+V+ ED AE +GL F E SAL N++ AF +L EIY +SKK L
Sbjct: 123 AGNKSDLNHLRSVADEDGRSLAEKEGLSFLETSALEATNIEKAFQTILSEIYHIISKKAL 182
Query: 199 ECGNGKVDGPPMLAGSKIDV 218
+ P G+ I++
Sbjct: 183 AAQEAAGNLPGQ--GTAINI 200
>sp|O04486|RAA2A_ARATH Ras-related protein RABA2a OS=Arabidopsis thaliana GN=RABA2A PE=2
SV=1
Length = 217
Score = 239 bits (611), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 113/178 (63%), Positives = 145/178 (81%), Gaps = 1/178 (0%)
Query: 22 PDK-IDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQ 80
PD+ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TRT+ + G+ +KAQ
Sbjct: 5 PDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQ 64
Query: 81 IWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIG 140
IWDTAGQERYRA+TSAYYRGALGA++VYD+TK +F++V+RW++ELR HADS+I I+LIG
Sbjct: 65 IWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMLIG 124
Query: 141 NKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL 198
NK+DL +RAV+ EDA +AE +GL F E SAL NV+ AF +L E+Y +SKK +
Sbjct: 125 NKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEALNVEKAFQTILSEVYRIISKKSI 182
>sp|Q40193|RB11C_LOTJA Ras-related protein Rab11C OS=Lotus japonicus GN=RAB11C PE=2 SV=1
Length = 216
Score = 239 bits (610), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 117/198 (59%), Positives = 146/198 (73%)
Query: 21 IPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQ 80
+ + DY+FK+V+IGDS VGKS ILSRFT+NEF +SKSTIGVEF TRT+ + GK +KAQ
Sbjct: 5 VDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQ 64
Query: 81 IWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIG 140
IWDTAGQERYRA+TSAYYRGA+GA++VYDITKRQ+FD+V RW+ ELR HADS+I I++ G
Sbjct: 65 IWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAG 124
Query: 141 NKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELEC 200
NKSDL +RAVS +D +E +GL F E SAL N++ AF +L EIY VSKK L
Sbjct: 125 NKSDLNHLRAVSEDDGGALSEKEGLSFLETSALEATNIEKAFQTILTEIYHIVSKKALAA 184
Query: 201 GNGKVDGPPMLAGSKIDV 218
G+ I+V
Sbjct: 185 QEATAGASVPGQGTTINV 202
>sp|Q9FK68|RAA1C_ARATH Ras-related protein RABA1c OS=Arabidopsis thaliana GN=RABA1C PE=1
SV=1
Length = 216
Score = 238 bits (608), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 119/214 (55%), Positives = 157/214 (73%), Gaps = 6/214 (2%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGKS +LSRFTKNEF +SKSTIGVEF TR++ ++ K+IKAQIW
Sbjct: 8 DEYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDDKVIKAQIW 67
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYD+T+ +F++V W++ELR H D +I ++L+GNK
Sbjct: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVETWLKELRNHTDPNIVVMLVGNK 127
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
SDL + AV EDA FAE + L+F E SAL NV+ AF +L +I+ VSKK +E +
Sbjct: 128 SDLRHLVAVQTEDAKSFAEKESLYFMETSALEATNVENAFAEVLTQIHHIVSKKAMEAAS 187
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
+ P G KID+ G D +S +KK CS
Sbjct: 188 ESANVPS--KGDKIDI--GKD--VSAVKKGGCCS 215
>sp|P17610|YPT3_SCHPO GTP-binding protein ypt3 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=ypt3 PE=1 SV=1
Length = 214
Score = 238 bits (608), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 118/213 (55%), Positives = 158/213 (74%), Gaps = 4/213 (1%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FK V+IGDS VGKS +L RFT+NEF +SKSTIGVEF TR + ++ K IKAQIW
Sbjct: 5 DEYDYLFKTVLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKIKAQIW 64
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDITK+ SFD+V RW++ELR HADS+I I+L+GNK
Sbjct: 65 DTAGQERYRAITSAYYRGAVGALIVYDITKQSSFDNVGRWLKELREHADSNIVIMLVGNK 124
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
+DL+ +RAVS E+A FA + L F E SA++ NV+ AF +L EI+ VS + LE G+
Sbjct: 125 TDLLHLRAVSTEEAQAFAAENNLSFIETSAMDASNVEEAFQTVLTEIFRIVSNRSLEAGD 184
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLSTC 235
DG AG +++ + ++++ K S C
Sbjct: 185 ---DGVHPTAGQTLNIAPTMN-DLNKKKSSSQC 213
>sp|Q9S810|RAA1I_ARATH Ras-related protein RABA1i OS=Arabidopsis thaliana GN=RABA1I PE=2
SV=1
Length = 218
Score = 238 bits (606), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 119/214 (55%), Positives = 156/214 (72%), Gaps = 4/214 (1%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D DY+FKVV+ GDS VGKS +LSRFT+N+F DS++TIGVEF TR++ + KI+KAQIW
Sbjct: 8 DDYDYLFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRATIGVEFATRSIQCDDKIVKAQIW 67
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYD+T+ +F++V RW++ELR H D++I I+L+GNK
Sbjct: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMLVGNK 127
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
+DL +RA+S E+A FAE + FF E SAL NVD AF +L +IY VSKK LE G+
Sbjct: 128 ADLRHLRAISTEEAKAFAERENTFFMETSALEAVNVDNAFTEVLTQIYRVVSKKALEAGD 187
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
P G I+V G +IS +KK CS
Sbjct: 188 DPTTALP--KGQMINV--GGRDDISAVKKPGCCS 217
>sp|Q40194|RB11D_LOTJA Ras-related protein Rab11D OS=Lotus japonicus GN=RAB11D PE=2 SV=1
Length = 218
Score = 238 bits (606), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 118/215 (54%), Positives = 157/215 (73%), Gaps = 6/215 (2%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FK+V+IGDS VGKS +LSRFTKNEF +SKSTIGVEF T+T+ ++ K++KAQIW
Sbjct: 8 DEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTLNVDAKVVKAQIW 67
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYD+T+R +F++ ARW++ELR H D +I ++LIGNK
Sbjct: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNIVVMLIGNK 127
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
SDL + AV ED FAE + L+F E SAL NV+ AF +L +IY VSK+ +E G+
Sbjct: 128 SDLRHLVAVPTEDGKSFAERESLYFMETSALEATNVENAFTEVLTQIYRIVSKRAVEAGD 187
Query: 203 -GKVDGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
G G P G I+V + S +K+ CS
Sbjct: 188 SGSSSGLPS-KGQTINVKEDS----SVLKRFGCCS 217
>sp|Q96283|RAA2C_ARATH Ras-related protein RABA2c OS=Arabidopsis thaliana GN=RABA2C PE=2
SV=4
Length = 217
Score = 237 bits (605), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 114/176 (64%), Positives = 139/176 (78%)
Query: 21 IPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQ 80
+ + DY+FK+V+IGDS VGKS ILSRFT+NEF +SKSTIGVEF TRT + GK IKAQ
Sbjct: 5 VDQEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTTQVEGKTIKAQ 64
Query: 81 IWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIG 140
IWDTAGQERYRA+TSAYYRGA+GA++VYDITKRQ+FD+V RW+ ELR HADS+I I++ G
Sbjct: 65 IWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAG 124
Query: 141 NKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKK 196
NKSDL +R+V+ ED AE +GL F E SAL NV+ AF +L EIY +SKK
Sbjct: 125 NKSDLNHLRSVAEEDGQSLAEKEGLSFLETSALEATNVEKAFQTILGEIYHIISKK 180
>sp|Q40723|RLGP2_ORYSJ Ras-related protein RGP2 OS=Oryza sativa subsp. japonica GN=RGP2
PE=2 SV=2
Length = 217
Score = 237 bits (604), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 111/170 (65%), Positives = 140/170 (82%)
Query: 27 YVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTAG 86
Y+FK+V+IGDS VGKS ILSRFT+N F DSKSTIGVEF T+++ + GK IKAQIWDTAG
Sbjct: 11 YLFKMVLIGDSGVGKSNILSRFTRNHFSLDSKSTIGVEFATKSLQMEGKTIKAQIWDTAG 70
Query: 87 QERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDLV 146
QERYRA+TSAYYRGA+GA++VYDITKRQSFD+V RW+ ELR HADSSI I+++GNKSDL+
Sbjct: 71 QERYRAITSAYYRGAVGALLVYDITKRQSFDNVHRWLRELRDHADSSIVIMMVGNKSDLI 130
Query: 147 DMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKK 196
+RAVS ++ AE +GLFF E SA+ NV+ AF ++ E+YG V++K
Sbjct: 131 HLRAVSEDEGKALAEKEGLFFLETSAMEAVNVEEAFQTIITEVYGIVNRK 180
>sp|P40393|RIC2_ORYSJ Ras-related protein RIC2 OS=Oryza sativa subsp. japonica GN=RIC2
PE=2 SV=2
Length = 217
Score = 236 bits (601), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 115/214 (53%), Positives = 157/214 (73%), Gaps = 6/214 (2%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK++KAQIW
Sbjct: 9 DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKVVKAQIW 68
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYD+T+ +F++V RW++ELR H D +I ++L+GNK
Sbjct: 69 DTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLKELRDHTDPNIVVMLVGNK 128
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
SDL + AV ++ FAE + L+F E SAL NV+ AF +L +IY VSK+ +E G+
Sbjct: 129 SDLRHLVAVQTDEGKAFAERESLYFMETSALESTNVENAFAEVLTQIYRIVSKRSVEAGD 188
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
GP G KI++ ++S +KK CS
Sbjct: 189 DAGSGPG--KGEKINIKD----DVSAVKKGGCCS 216
>sp|Q9FIF9|RAA2D_ARATH Ras-related protein RABA2d OS=Arabidopsis thaliana GN=RABA2D PE=2
SV=1
Length = 217
Score = 234 bits (598), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 111/171 (64%), Positives = 138/171 (80%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
DY+FK+V+IGDS VGK+ ILSRFT+NEF +SKSTIGVEF TRT+ + GK +KAQIWDTA
Sbjct: 10 DYLFKIVLIGDSGVGKTNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTA 69
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQERYRA+TSAYYRGA+GA++VYDITKRQ+FD+V RW+ ELR HADS+I I++ GNK+DL
Sbjct: 70 GQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNKADL 129
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKK 196
+R+V+ ED AE +GL F E SAL NV+ AF +L EIY +SKK
Sbjct: 130 NHLRSVAEEDGQTLAETEGLSFLETSALEATNVEKAFQTVLAEIYHIISKK 180
>sp|P38555|YPT31_YEAST GTP-binding protein YPT31/YPT8 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=YPT31 PE=1 SV=3
Length = 223
Score = 234 bits (597), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 117/216 (54%), Positives = 152/216 (70%), Gaps = 8/216 (3%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
D +FK+V+IGDS VGKS +LSRFTKNEF DSKSTIGVEF TRT+ I+GK IKAQIWDTA
Sbjct: 11 DLLFKIVLIGDSGVGKSNLLSRFTKNEFNMDSKSTIGVEFATRTLEIDGKRIKAQIWDTA 70
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQERYRA+TSAYYRGA+GA++VYDI+K S+++ W+ ELR +AD ++ + LIGNKSDL
Sbjct: 71 GQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLSELRENADDNVAVGLIGNKSDL 130
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECG---- 201
+RAV E++ FA++ L F+E SALN +NVD AF L+ IY VSK +++ G
Sbjct: 131 AHLRAVPTEESKTFAQENQLLFTETSALNSENVDKAFEELINTIYQKVSKHQMDLGDSSA 190
Query: 202 NGKVDGPPMLAGSKIDVISGADLEISEMKKLSTCSC 237
NG +G G I + + E KK + +C
Sbjct: 191 NGNANGASAPNGPTISLTPTPN----ENKKANGNNC 222
>sp|Q01111|YPT3_NICPL Ras-related protein YPT3 OS=Nicotiana plumbaginifolia GN=YPT3 PE=2
SV=1
Length = 218
Score = 234 bits (597), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 119/214 (55%), Positives = 157/214 (73%), Gaps = 4/214 (1%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FK+V+IGDS VGKS +LSRFTKNEF +SKSTIGVEF T+++ I+ K+IKAQIW
Sbjct: 8 DEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKSLNIDNKVIKAQIW 67
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYD+T+ ++++V RW++ELR H D +I ++LIGNK
Sbjct: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHVTYENVTRWLKELRDHTDPNIVVMLIGNK 127
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
SDL + AVS ++A AE +GL+F E SAL NV+ AF L +IY VSKK +E G+
Sbjct: 128 SDLRHLVAVSTDEAKGLAEREGLYFMETSALEATNVENAFTEALTQIYRIVSKKAVEAGD 187
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
+G A K + I+ D E S KK CS
Sbjct: 188 ---EGATSSAPPKGETINIKD-EGSSWKKFGCCS 217
>sp|Q5ZJN2|RB11A_CHICK Ras-related protein Rab-11A OS=Gallus gallus GN=RAB11A PE=2 SV=1
Length = 216
Score = 234 bits (597), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 111/176 (63%), Positives = 143/176 (81%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIW
Sbjct: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI K ++++V RW++ELR HADS+I I+L+GNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNK 125
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL 198
SDL +RAV ++A FAE GL F E SAL+ NV+ AF +L EIY VS+K++
Sbjct: 126 SDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQM 181
>sp|P62494|RB11A_RAT Ras-related protein Rab-11A OS=Rattus norvegicus GN=Rab11a PE=1
SV=3
Length = 216
Score = 234 bits (597), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 111/176 (63%), Positives = 143/176 (81%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIW
Sbjct: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI K ++++V RW++ELR HADS+I I+L+GNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNK 125
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL 198
SDL +RAV ++A FAE GL F E SAL+ NV+ AF +L EIY VS+K++
Sbjct: 126 SDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQM 181
>sp|P62493|RB11A_RABIT Ras-related protein Rab-11A OS=Oryctolagus cuniculus GN=RAB11A PE=2
SV=3
Length = 216
Score = 234 bits (597), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 111/176 (63%), Positives = 143/176 (81%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIW
Sbjct: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI K ++++V RW++ELR HADS+I I+L+GNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNK 125
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL 198
SDL +RAV ++A FAE GL F E SAL+ NV+ AF +L EIY VS+K++
Sbjct: 126 SDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQM 181
>sp|Q5R9M7|RB11A_PONAB Ras-related protein Rab-11A OS=Pongo abelii GN=RAB11A PE=2 SV=3
Length = 216
Score = 234 bits (597), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 111/176 (63%), Positives = 143/176 (81%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIW
Sbjct: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI K ++++V RW++ELR HADS+I I+L+GNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNK 125
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL 198
SDL +RAV ++A FAE GL F E SAL+ NV+ AF +L EIY VS+K++
Sbjct: 126 SDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQM 181
>sp|Q52NJ1|RB11A_PIG Ras-related protein Rab-11A OS=Sus scrofa GN=RAB11A PE=2 SV=3
Length = 216
Score = 234 bits (597), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 111/176 (63%), Positives = 143/176 (81%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIW
Sbjct: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI K ++++V RW++ELR HADS+I I+L+GNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNK 125
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL 198
SDL +RAV ++A FAE GL F E SAL+ NV+ AF +L EIY VS+K++
Sbjct: 126 SDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQM 181
>sp|P62492|RB11A_MOUSE Ras-related protein Rab-11A OS=Mus musculus GN=Rab11a PE=1 SV=3
Length = 216
Score = 234 bits (597), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 111/176 (63%), Positives = 143/176 (81%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIW
Sbjct: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI K ++++V RW++ELR HADS+I I+L+GNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNK 125
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL 198
SDL +RAV ++A FAE GL F E SAL+ NV+ AF +L EIY VS+K++
Sbjct: 126 SDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQM 181
>sp|P62491|RB11A_HUMAN Ras-related protein Rab-11A OS=Homo sapiens GN=RAB11A PE=1 SV=3
Length = 216
Score = 234 bits (597), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 111/176 (63%), Positives = 143/176 (81%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIW
Sbjct: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI K ++++V RW++ELR HADS+I I+L+GNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNK 125
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL 198
SDL +RAV ++A FAE GL F E SAL+ NV+ AF +L EIY VS+K++
Sbjct: 126 SDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQM 181
>sp|P62490|RB11A_CANFA Ras-related protein Rab-11A OS=Canis familiaris GN=RAB11A PE=2 SV=3
Length = 216
Score = 234 bits (597), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 111/176 (63%), Positives = 143/176 (81%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIW
Sbjct: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI K ++++V RW++ELR HADS+I I+L+GNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNK 125
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL 198
SDL +RAV ++A FAE GL F E SAL+ NV+ AF +L EIY VS+K++
Sbjct: 126 SDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQM 181
>sp|O35509|RB11B_RAT Ras-related protein Rab-11B OS=Rattus norvegicus GN=Rab11b PE=2
SV=4
Length = 218
Score = 234 bits (596), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 118/203 (58%), Positives = 150/203 (73%), Gaps = 10/203 (4%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIW
Sbjct: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI K ++++V RW++ELR HADS+I I+L+GNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNK 125
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL---- 198
SDL +RAV ++A FAE L F E SAL+ NV+ AF +L EIY VS+K++
Sbjct: 126 SDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADRA 185
Query: 199 ----ECGNGKVD--GPPMLAGSK 215
GN VD PP G K
Sbjct: 186 AHDESPGNNVVDISVPPTTDGQK 208
>sp|Q15907|RB11B_HUMAN Ras-related protein Rab-11B OS=Homo sapiens GN=RAB11B PE=1 SV=4
Length = 218
Score = 234 bits (596), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 118/203 (58%), Positives = 150/203 (73%), Gaps = 10/203 (4%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIW
Sbjct: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI K ++++V RW++ELR HADS+I I+L+GNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNK 125
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL---- 198
SDL +RAV ++A FAE L F E SAL+ NV+ AF +L EIY VS+K++
Sbjct: 126 SDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADRA 185
Query: 199 ----ECGNGKVD--GPPMLAGSK 215
GN VD PP G K
Sbjct: 186 AHDESPGNNVVDISVPPTTDGQK 208
>sp|Q3MHP2|RB11B_BOVIN Ras-related protein Rab-11B OS=Bos taurus GN=RAB11B PE=2 SV=3
Length = 218
Score = 234 bits (596), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 118/203 (58%), Positives = 150/203 (73%), Gaps = 10/203 (4%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIW
Sbjct: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI K ++++V RW++ELR HADS+I I+L+GNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNK 125
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL---- 198
SDL +RAV ++A FAE L F E SAL+ NV+ AF +L EIY VS+K++
Sbjct: 126 SDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADRA 185
Query: 199 ----ECGNGKVD--GPPMLAGSK 215
GN VD PP G K
Sbjct: 186 AHDESPGNNVVDISVPPTTDGQK 208
>sp|Q39572|YPTC6_CHLRE Ras-related protein YPTC6 OS=Chlamydomonas reinhardtii GN=YPTC6
PE=3 SV=1
Length = 216
Score = 233 bits (595), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 119/200 (59%), Positives = 150/200 (75%), Gaps = 3/200 (1%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIW
Sbjct: 7 DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIQVDGKTIKAQIW 66
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDITK +F++V RW++ELR HADS+I I+L+GNK
Sbjct: 67 DTAGQERYRAITSAYYRGAVGALLVYDITKSVTFENVERWLKELRDHADSNIVIMLVGNK 126
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
SDL +R V E A F E +GL F E SAL NV+ AF ++L EIY VSKK L+ +
Sbjct: 127 SDLKHLRDVQTEVAQAFCEREGLSFIETSALESTNVEKAFQQILTEIYHIVSKKVLDSED 186
Query: 203 GKVDGPPMLAGSKIDVISGA 222
+ P + G + VI A
Sbjct: 187 NR---PKIGEGRDVIVIDNA 203
>sp|Q1PEX3|RAA1H_ARATH Ras-related protein RABA1h OS=Arabidopsis thaliana GN=RABA1H PE=2
SV=1
Length = 218
Score = 233 bits (595), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 114/214 (53%), Positives = 157/214 (73%), Gaps = 4/214 (1%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D DY+FKVV+ GDS VGKS +LSRFT+N+F DS+STIGVEF TR++ ++ KI+KAQIW
Sbjct: 8 DDYDYLFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRSTIGVEFATRSIQVDDKIVKAQIW 67
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYD+T+ +F++V RW++ELR H D++ I+L+GNK
Sbjct: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANTVIMLVGNK 127
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
+DL +RA+S E+ +FAE + FF E SAL NV+ AF +L +IY VSKK L+ G+
Sbjct: 128 ADLNHLRAISTEEVKDFAERENTFFMETSALEAINVENAFTEVLTQIYRVVSKKALDAGD 187
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
P G I+V G+ ++S +KK C+
Sbjct: 188 DPTTALP--KGQMINV--GSRDDVSAVKKSGCCA 217
>sp|P22129|RB11B_DIPOM Ras-related protein Rab-11B OS=Diplobatis ommata PE=2 SV=1
Length = 218
Score = 233 bits (594), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 117/203 (57%), Positives = 150/203 (73%), Gaps = 10/203 (4%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIW
Sbjct: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI K ++++V RW++ELR HAD++I I+L+GNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNK 125
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL---- 198
SDL +RAV ++A FAE L F E SAL+ NV+ AF +L EIY VS+K++
Sbjct: 126 SDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQISDRS 185
Query: 199 ----ECGNGKVD--GPPMLAGSK 215
GN VD PP G K
Sbjct: 186 AHDESPGNNVVDISVPPTTDGQK 208
>sp|Q2TA29|RB11A_BOVIN Ras-related protein Rab-11A OS=Bos taurus GN=RAB11A PE=2 SV=3
Length = 216
Score = 233 bits (594), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 111/176 (63%), Positives = 143/176 (81%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIW
Sbjct: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI K ++++V RW++ELR HADS+I I+L+GNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNK 125
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL 198
SDL +RAV ++A FAE GL F E SAL+ NV+ AF +L EIY VS+K++
Sbjct: 126 SDLRHLRAVPTDEARAFAEKNGLSFIETSALDYTNVEAAFQTILTEIYRIVSQKQM 181
>sp|P46638|RB11B_MOUSE Ras-related protein Rab-11B OS=Mus musculus GN=Rab11b PE=1 SV=3
Length = 218
Score = 233 bits (593), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 117/203 (57%), Positives = 150/203 (73%), Gaps = 10/203 (4%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FKVV+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR++ ++GK IKAQIW
Sbjct: 6 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIW 65
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDI K ++++V RW++ELR HADS+I I+L+GNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNK 125
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL---- 198
SDL +RAV ++A FAE L F E SAL+ NV+ AF +L EIY VS+K++
Sbjct: 126 SDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADRA 185
Query: 199 ----ECGNGKVD--GPPMLAGSK 215
GN VD PP G +
Sbjct: 186 AHDESPGNNVVDISVPPTTDGQR 208
>sp|Q40523|RB11A_TOBAC Ras-related protein Rab11A OS=Nicotiana tabacum GN=RAB11A PE=2 SV=1
Length = 216
Score = 232 bits (591), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 113/178 (63%), Positives = 138/178 (77%)
Query: 19 NMIPDKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIK 78
N + + DY+FK+V+IGDS VGKS ILSRFT+NEF +SKSTIGVEF TRT+ + GK +K
Sbjct: 3 NRVDHEYDYLFKMVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVK 62
Query: 79 AQIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIIL 138
AQIWDTAGQERYRA+TSAYYRGA+GA++ YDITKRQ+FD+V RW+ ELR H DS+I IIL
Sbjct: 63 AQIWDTAGQERYRAITSAYYRGAVGALLFYDITKRQTFDNVQRWLRELRDHRDSNIVIIL 122
Query: 139 IGNKSDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKK 196
GNKSDL +RAVS +D + +GL F E SAL NVD AF +L +IY +SKK
Sbjct: 123 AGNKSDLKHLRAVSEQDDQALVKKEGLSFLETSALEALNVDKAFQTILTDIYHIISKK 180
>sp|O49513|RAA1E_ARATH Ras-related protein RABA1e OS=Arabidopsis thaliana GN=RABA1E PE=2
SV=1
Length = 217
Score = 231 bits (590), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 114/214 (53%), Positives = 158/214 (73%), Gaps = 5/214 (2%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D DY+FK+V+IGDS VGKS +LSRFT+NEF +SKSTIGVEF TR+V ++ KIIKAQ+W
Sbjct: 8 DDYDYLFKLVLIGDSGVGKSNLLSRFTRNEFSIESKSTIGVEFATRSVHVDEKIIKAQLW 67
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYDIT+ +F++V RW++ELR H D+++ I+L+GNK
Sbjct: 68 DTAGQERYRAITSAYYRGAVGALLVYDITRHITFENVERWLKELRDHTDANVVIMLVGNK 127
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
+DL +RAV E+A F+E + +FF E SAL+ NV+ AF +L +IY +S+K L+
Sbjct: 128 ADLRHLRAVPTEEARSFSERENMFFMETSALDATNVEQAFTHVLTQIYRVMSRKALD--- 184
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
G D + G ID+ G +++ +K CS
Sbjct: 185 GTGDPMSLPKGQTIDI--GNKDDVTAVKSSGCCS 216
>sp|Q40195|RB11E_LOTJA Ras-related protein Rab11E OS=Lotus japonicus GN=RAB11E PE=2 SV=1
Length = 218
Score = 231 bits (588), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 107/180 (59%), Positives = 141/180 (78%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
D+ DY+FK+V+IGDS VGKS +LSRFT+NEF +SKSTIGVEF T+++ I+GK+IKAQIW
Sbjct: 8 DEYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLNIDGKVIKAQIW 67
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA++VYD+T+ +F+ RW++ELR H D +I ++LIGNK
Sbjct: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRSTTFETAGRWLKELRDHTDPNIVVMLIGNK 127
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
SDL + VS ED FAE + L+F E SAL NV+ AF +L +IY VSK+ +E G+
Sbjct: 128 SDLRHLVTVSTEDGKAFAEKESLYFMETSALEATNVENAFSEVLTQIYRIVSKRAVEAGD 187
>sp|P28185|RAA1A_ARATH Ras-related protein RABA1a OS=Arabidopsis thaliana GN=RABA1A PE=1
SV=1
Length = 216
Score = 230 bits (587), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 112/214 (52%), Positives = 153/214 (71%), Gaps = 6/214 (2%)
Query: 23 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIW 82
++ DY+FK+V+IGDS VGKS +LSRFTKNEF +SKSTIGVEF T+T + GK++KAQIW
Sbjct: 8 EEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTTKVEGKVVKAQIW 67
Query: 83 DTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNK 142
DTAGQERYRA+TSAYYRGA+GA+++YD+T+ +F++ ARW+ ELR H D +I ++LIGNK
Sbjct: 68 DTAGQERYRAITSAYYRGAVGALLIYDVTRHATFENAARWLRELRGHTDPNIVVMLIGNK 127
Query: 143 SDLVDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 202
DL + AV E+A FAE + L+F E SAL+ NV+ AF +L +I+ VSK+ ++ G
Sbjct: 128 CDLRHLVAVKTEEAKAFAERESLYFMETSALDATNVENAFTEVLTQIHKIVSKRSVDGGG 187
Query: 203 GKVDGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
D P G I+V S +K++ CS
Sbjct: 188 ESADLPG--KGETINVKEDG----SVLKRMGCCS 215
>sp|Q9FGK5|RAA5A_ARATH Ras-related protein RABA5a OS=Arabidopsis thaliana GN=RABA5A PE=2
SV=1
Length = 221
Score = 228 bits (582), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 116/211 (54%), Positives = 152/211 (72%), Gaps = 2/211 (0%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
DY+FK+V+IGDSAVGKS +L+RF ++EF+ +SKSTIGVEFQT+ + INGK IKAQIWDTA
Sbjct: 12 DYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEIKAQIWDTA 71
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQER+RAVTSAYYRGA+GA++VYDI++RQ+F + RW+ EL H+D ++ IL+GNKSDL
Sbjct: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFHSIGRWLNELHTHSDMNVVTILVGNKSDL 131
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNGKV 205
D+R VS + AE QGLFF E SAL+ NV AF +++EIY +S+K +
Sbjct: 132 KDLREVSTAEGKALAEAQGLFFMETSALDSSNVAAAFETVVKEIYNILSRKVMSSQELNK 191
Query: 206 DGPPMLAGSKIDVISGADLEISEMKKLSTCS 236
P L+ K VI +D + E KK CS
Sbjct: 192 QDPASLSNGKKVVIP-SDGQ-GEFKKGGCCS 220
>sp|P19892|RAA5E_ARATH Ras-related protein RABA5e OS=Arabidopsis thaliana GN=RABA5E PE=2
SV=1
Length = 218
Score = 227 bits (578), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 105/173 (60%), Positives = 143/173 (82%)
Query: 26 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTA 85
+Y+FK+VVIGDSAVGKS +LSR+ +NEF +SK+TIGVEFQT+++ I GK +KAQIWDTA
Sbjct: 10 EYLFKIVVIGDSAVGKSNLLSRYARNEFSANSKATIGVEFQTQSMEIEGKEVKAQIWDTA 69
Query: 86 GQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDL 145
GQER+RAVTSAYYRGA+GA+VVYDIT+R +F+ V RW++EL+ H+D+++ +L+GNK DL
Sbjct: 70 GQERFRAVTSAYYRGAVGALVVYDITRRTTFESVGRWLDELKIHSDTTVARMLVGNKCDL 129
Query: 146 VDMRAVSAEDAVEFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL 198
++RAVS E+ AE++GLFF E SAL+ NV TAF ++ +IY VS+K+L
Sbjct: 130 ENIRAVSVEEGKALAEEEGLFFVETSALDSTNVKTAFEMVILDIYNNVSRKQL 182
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.133 0.375
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 83,151,859
Number of Sequences: 539616
Number of extensions: 3237348
Number of successful extensions: 12037
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 925
Number of HSP's successfully gapped in prelim test: 246
Number of HSP's that attempted gapping in prelim test: 10235
Number of HSP's gapped (non-prelim): 1250
length of query: 237
length of database: 191,569,459
effective HSP length: 114
effective length of query: 123
effective length of database: 130,053,235
effective search space: 15996547905
effective search space used: 15996547905
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)