Your job contains 1 sequence.
>026551
MYMCGAYAVKIGRPGYRVTKQFDPETKQRSLLFQIEYPEIEDLSKPRHRFMSSFEQRVQP
FDKRYQYLMFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPDSKMFTLQLYFKSKPVEGNK
PQAAPAANGAVAPPPPPPPQGPPPGVSAGNAPRAPPPPMTGTLPPPPPPMANGPRPMPPG
GAPPAPPPPPGGSGTMANFTPGTQVGRPPTMPPPPPQGYGGQQMPIRPPPPPPNMGQ
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 026551
(237 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2060279 - symbol:AT2G32600 species:3702 "Arabi... 515 2.0e-49 1
ZFIN|ZDB-GENE-040426-897 - symbol:sf3a2 "splicing factor ... 379 5.1e-35 1
UNIPROTKB|A5PJN8 - symbol:SF3A2 "Splicing factor 3A subun... 371 3.6e-34 1
UNIPROTKB|G3MW14 - symbol:SF3A2 "Splicing factor 3A subun... 371 3.6e-34 1
UNIPROTKB|J9P6E2 - symbol:SF3A2 "Uncharacterized protein"... 371 3.6e-34 1
UNIPROTKB|Q15428 - symbol:SF3A2 "Splicing factor 3A subun... 371 3.6e-34 1
RGD|1308627 - symbol:Sf3a2 "splicing factor 3a, subunit 2... 371 3.6e-34 1
FB|FBgn0036314 - symbol:CG10754 species:7227 "Drosophila ... 361 4.1e-33 1
DICTYBASE|DDB_G0293876 - symbol:sf3a2 "splicing factor 3A... 359 6.7e-33 1
WB|WBGene00008683 - symbol:repo-1 species:6239 "Caenorhab... 359 6.7e-33 1
UNIPROTKB|Q19335 - symbol:repo-1 "Protein REPO-1" species... 359 6.7e-33 1
UNIPROTKB|G4MKX4 - symbol:MGG_05375 "Splicing factor 3a s... 298 1.9e-26 1
UNIPROTKB|F1NDG0 - symbol:AMH "Uncharacterized protein" s... 291 1.1e-25 1
UNIPROTKB|F1NUL0 - symbol:AMH "Uncharacterized protein" s... 291 1.1e-25 1
ASPGD|ASPL0000030386 - symbol:AN5530 species:162425 "Emer... 285 4.6e-25 1
UNIPROTKB|E2QXZ1 - symbol:SF3A2 "Uncharacterized protein"... 279 5.1e-24 1
GENEDB_PFALCIPARUM|PFF0970w - symbol:PFF0970w "splicing f... 267 3.8e-23 1
UNIPROTKB|C6KT39 - symbol:PFF0970w "Splicing factor 3a su... 267 3.8e-23 1
POMBASE|SPBC21C3.05 - symbol:sap62 "zinc finger protein S... 259 2.6e-22 1
CGD|CAL0004398 - symbol:orf19.4724 species:5476 "Candida ... 109 3.5e-14 2
UNIPROTKB|K7EMT0 - symbol:SF3A2 "Splicing factor 3A subun... 101 1.5e-05 1
UNIPROTKB|K7EP23 - symbol:SF3A2 "Splicing factor 3A subun... 98 3.0e-05 1
UNIPROTKB|K7EKV8 - symbol:SF3A2 "Splicing factor 3A subun... 101 4.4e-05 1
>TAIR|locus:2060279 [details] [associations]
symbol:AT2G32600 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0008150 "biological_process" evidence=ND] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0051604 "protein maturation"
evidence=RCA] InterPro:IPR000690 InterPro:IPR003604
InterPro:IPR015880 InterPro:IPR019134 PROSITE:PS50171 SMART:SM00355
SMART:SM00451 SMART:SM01050 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0003676
EMBL:AC004681 eggNOG:COG5246 HOGENOM:HOG000191688 KO:K12826
OMA:KWQYLLF EMBL:AY052725 EMBL:AY098956 IPI:IPI00525943 PIR:T02559
RefSeq:NP_565747.1 UniGene:At.12771 ProteinModelPortal:O80897
SMR:O80897 STRING:O80897 PaxDb:O80897 PRIDE:O80897
EnsemblPlants:AT2G32600.1 GeneID:817820 KEGG:ath:AT2G32600
TAIR:At2g32600 InParanoid:O80897 PhylomeDB:O80897
ProtClustDB:CLSN2688636 ArrayExpress:O80897 Genevestigator:O80897
Uniprot:O80897
Length = 277
Score = 515 (186.3 bits), Expect = 2.0e-49, P = 2.0e-49
Identities = 95/112 (84%), Positives = 103/112 (91%)
Query: 9 VKIGRPGYRVTKQFDPETKQRSLLFQIEYPEIEDLSKPRHRFMSSFEQRVQPFDKRYQYL 68
VKIGRPGYRVTKQ+DPE +QRSLLFQIEYPEIED KPRHRFMSS+EQ+VQP+DK YQYL
Sbjct: 108 VKIGRPGYRVTKQYDPELQQRSLLFQIEYPEIEDNIKPRHRFMSSYEQKVQPYDKSYQYL 167
Query: 69 MFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPDSKMFTLQLYFKSKPVEGNK 120
+FAAEPYEIIAFKVPSTE+DKSTPKFFSHWDPDSKMFTLQ+YFK E NK
Sbjct: 168 LFAAEPYEIIAFKVPSTEVDKSTPKFFSHWDPDSKMFTLQVYFKPTKPEPNK 219
>ZFIN|ZDB-GENE-040426-897 [details] [associations]
symbol:sf3a2 "splicing factor 3a, subunit 2"
species:7955 "Danio rerio" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR000690 InterPro:IPR003604
InterPro:IPR015880 InterPro:IPR019134 PROSITE:PS50171 SMART:SM00355
SMART:SM00451 SMART:SM01050 ZFIN:ZDB-GENE-040426-897 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 GO:GO:0003676 eggNOG:COG5246
GeneTree:ENSGT00670000097795 HOGENOM:HOG000191688 KO:K12826
CTD:8175 OrthoDB:EOG4P8FK1 OMA:KWQYLLF HOVERGEN:HBG060566
EMBL:BX324113 EMBL:BC045907 EMBL:BC066469 IPI:IPI00482860
RefSeq:NP_957337.1 UniGene:Dr.114115 STRING:Q7ZVD4
Ensembl:ENSDART00000010699 GeneID:394018 KEGG:dre:394018
InParanoid:Q7ZVD4 NextBio:20814983 Uniprot:Q7ZVD4
Length = 278
Score = 379 (138.5 bits), Expect = 5.1e-35, P = 5.1e-35
Identities = 69/104 (66%), Positives = 88/104 (84%)
Query: 9 VKIGRPGYRVTKQFDPETKQRSLLFQIEYPEIEDLSKPRHRFMSSFEQRVQPFDKRYQYL 68
VKIGRPGY+VTKQ DPE Q+SLLFQI+YPEI + PRHRFMS++EQR++P D+R+QYL
Sbjct: 110 VKIGRPGYKVTKQRDPEIGQQSLLFQIDYPEIAEGIGPRHRFMSAYEQRIEPPDRRWQYL 169
Query: 69 MFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPDSKMFTLQLYFK 112
+FAAEPYE IAFKVPS EIDK+ +F++HW+ ++K F LQ +FK
Sbjct: 170 LFAAEPYETIAFKVPSREIDKAETRFWTHWNRETKQFFLQFHFK 213
>UNIPROTKB|A5PJN8 [details] [associations]
symbol:SF3A2 "Splicing factor 3A subunit 2" species:9913
"Bos taurus" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000690 InterPro:IPR003604
InterPro:IPR015880 InterPro:IPR019134 PROSITE:PS50171 SMART:SM00355
SMART:SM00451 SMART:SM01050 GO:GO:0008380 GO:GO:0046872
GO:GO:0008270 GO:GO:0006397 GO:GO:0003676 GO:GO:0071013
eggNOG:COG5246 KO:K12826 EMBL:BC142185 IPI:IPI00707096
RefSeq:NP_001092681.1 UniGene:Bt.27293 STRING:A5PJN8 PRIDE:A5PJN8
GeneID:789082 KEGG:bta:789082 CTD:8175 HOGENOM:HOG000154298
InParanoid:A5PJN8 OrthoDB:EOG4P8FK1 NextBio:20929492 Uniprot:A5PJN8
Length = 477
Score = 371 (135.7 bits), Expect = 3.6e-34, P = 3.6e-34
Identities = 70/108 (64%), Positives = 88/108 (81%)
Query: 9 VKIGRPGYRVTKQFDPETKQRSLLFQIEYPEIEDLSKPRHRFMSSFEQRVQPFDKRYQYL 68
VKIGRPGY+VTKQ D E Q+SLLFQI+YPEI + PRHRFMS++EQR++P D+R+QYL
Sbjct: 110 VKIGRPGYKVTKQRDTEMGQQSLLFQIDYPEIAEGIMPRHRFMSAYEQRIEPPDRRWQYL 169
Query: 69 MFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPDSKMFTLQLYFK-SKP 115
+ AAEPYE IAFKVPS EIDK+ KF++HW+ ++K F LQ +FK KP
Sbjct: 170 LMAAEPYETIAFKVPSREIDKAEGKFWTHWNRETKQFFLQFHFKMEKP 217
>UNIPROTKB|G3MW14 [details] [associations]
symbol:SF3A2 "Splicing factor 3A subunit 2" species:9913
"Bos taurus" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] InterPro:IPR000690 InterPro:IPR003604
InterPro:IPR015880 InterPro:IPR019134 PROSITE:PS50171 SMART:SM00355
SMART:SM00451 SMART:SM01050 GO:GO:0046872 GO:GO:0008270
GO:GO:0006397 GO:GO:0003676 GO:GO:0071013
GeneTree:ENSGT00670000097795 OMA:GIHPQAP EMBL:DAAA02019685
Ensembl:ENSBTAT00000035788 Uniprot:G3MW14
Length = 411
Score = 371 (135.7 bits), Expect = 3.6e-34, P = 3.6e-34
Identities = 70/108 (64%), Positives = 88/108 (81%)
Query: 9 VKIGRPGYRVTKQFDPETKQRSLLFQIEYPEIEDLSKPRHRFMSSFEQRVQPFDKRYQYL 68
VKIGRPGY+VTKQ D E Q+SLLFQI+YPEI + PRHRFMS++EQR++P D+R+QYL
Sbjct: 110 VKIGRPGYKVTKQRDTEMGQQSLLFQIDYPEIAEGIMPRHRFMSAYEQRIEPPDRRWQYL 169
Query: 69 MFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPDSKMFTLQLYFK-SKP 115
+ AAEPYE IAFKVPS EIDK+ KF++HW+ ++K F LQ +FK KP
Sbjct: 170 LMAAEPYETIAFKVPSREIDKAEGKFWTHWNRETKQFFLQFHFKMEKP 217
>UNIPROTKB|J9P6E2 [details] [associations]
symbol:SF3A2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000690 InterPro:IPR003604
InterPro:IPR015880 InterPro:IPR019134 PROSITE:PS50171 SMART:SM00355
SMART:SM00451 SMART:SM01050 GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 GO:GO:0003676 GeneTree:ENSGT00670000097795 KO:K12826
CTD:8175 OMA:GIHPQAP EMBL:AAEX03012610 RefSeq:XP_855016.2
Ensembl:ENSCAFT00000049949 GeneID:612188 KEGG:cfa:612188
Uniprot:J9P6E2
Length = 478
Score = 371 (135.7 bits), Expect = 3.6e-34, P = 3.6e-34
Identities = 70/108 (64%), Positives = 88/108 (81%)
Query: 9 VKIGRPGYRVTKQFDPETKQRSLLFQIEYPEIEDLSKPRHRFMSSFEQRVQPFDKRYQYL 68
VKIGRPGY+VTKQ D E Q+SLLFQI+YPEI + PRHRFMS++EQR++P D+R+QYL
Sbjct: 110 VKIGRPGYKVTKQRDTEMGQQSLLFQIDYPEIAEGIMPRHRFMSAYEQRIEPPDRRWQYL 169
Query: 69 MFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPDSKMFTLQLYFK-SKP 115
+ AAEPYE IAFKVPS EIDK+ KF++HW+ ++K F LQ +FK KP
Sbjct: 170 LMAAEPYETIAFKVPSREIDKAEGKFWTHWNRETKQFFLQFHFKMEKP 217
>UNIPROTKB|Q15428 [details] [associations]
symbol:SF3A2 "Splicing factor 3A subunit 2" species:9606
"Homo sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;TAS] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0030532 "small nuclear
ribonucleoprotein complex" evidence=TAS] [GO:0000389 "mRNA
3'-splice site recognition" evidence=TAS] [GO:0005681 "spliceosomal
complex" evidence=IDA] [GO:0006397 "mRNA processing" evidence=IMP]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
Reactome:REACT_71 InterPro:IPR000690 InterPro:IPR003604
InterPro:IPR015880 InterPro:IPR019134 PROSITE:PS50171 SMART:SM00355
SMART:SM00451 SMART:SM01050 GO:GO:0005654 GO:GO:0046872
GO:GO:0008270 Reactome:REACT_1675 GO:GO:0003676 EMBL:CH471139
GO:GO:0071013 GO:GO:0030532 GO:GO:0000389 EMBL:AC005263
eggNOG:COG5246 KO:K12826 CTD:8175 OrthoDB:EOG4P8FK1 EMBL:L21990
EMBL:AK314815 EMBL:BC004434 EMBL:BC009903 IPI:IPI00017341
PIR:A47655 RefSeq:NP_009096.2 UniGene:Hs.115232
ProteinModelPortal:Q15428 SMR:Q15428 IntAct:Q15428
MINT:MINT-1190499 STRING:Q15428 PhosphoSite:Q15428 DMDM:20141793
PaxDb:Q15428 PRIDE:Q15428 DNASU:8175 Ensembl:ENST00000221494
GeneID:8175 KEGG:hsa:8175 UCSC:uc002lvg.3 GeneCards:GC19P002236
HGNC:HGNC:10766 MIM:600796 neXtProt:NX_Q15428 PharmGKB:PA35684
HOVERGEN:HBG060566 InParanoid:Q15428 OMA:GIHPQAP PhylomeDB:Q15428
GenomeRNAi:8175 NextBio:30856 Bgee:Q15428 CleanEx:HS_SF3A2
Genevestigator:Q15428 GermOnline:ENSG00000104897 Uniprot:Q15428
Length = 464
Score = 371 (135.7 bits), Expect = 3.6e-34, P = 3.6e-34
Identities = 70/108 (64%), Positives = 88/108 (81%)
Query: 9 VKIGRPGYRVTKQFDPETKQRSLLFQIEYPEIEDLSKPRHRFMSSFEQRVQPFDKRYQYL 68
VKIGRPGY+VTKQ D E Q+SLLFQI+YPEI + PRHRFMS++EQR++P D+R+QYL
Sbjct: 110 VKIGRPGYKVTKQRDSEMGQQSLLFQIDYPEIAEGIMPRHRFMSAYEQRIEPPDRRWQYL 169
Query: 69 MFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPDSKMFTLQLYFK-SKP 115
+ AAEPYE IAFKVPS EIDK+ KF++HW+ ++K F LQ +FK KP
Sbjct: 170 LMAAEPYETIAFKVPSREIDKAEGKFWTHWNRETKQFFLQFHFKMEKP 217
>RGD|1308627 [details] [associations]
symbol:Sf3a2 "splicing factor 3a, subunit 2" species:10116
"Rattus norvegicus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA;ISO]
[GO:0006397 "mRNA processing" evidence=IEA;ISO] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=ISO]
InterPro:IPR000690 InterPro:IPR003604 InterPro:IPR015880
InterPro:IPR019134 PROSITE:PS50171 SMART:SM00355 SMART:SM00451
SMART:SM01050 RGD:1308627 GO:GO:0008380 GO:GO:0046872 GO:GO:0008270
GO:GO:0006397 GO:GO:0005681 GO:GO:0003676 eggNOG:COG5246
GeneTree:ENSGT00670000097795 KO:K12826 CTD:8175
HOGENOM:HOG000154298 OrthoDB:EOG4P8FK1 HOVERGEN:HBG060566
OMA:GIHPQAP EMBL:BC079320 IPI:IPI00464554 RefSeq:NP_001011986.1
UniGene:Rn.102569 STRING:Q6AXT8 Ensembl:ENSRNOT00000026202
GeneID:299620 KEGG:rno:299620 UCSC:RGD:1308627 InParanoid:Q6AXT8
NextBio:645532 Genevestigator:Q6AXT8 Uniprot:Q6AXT8
Length = 471
Score = 371 (135.7 bits), Expect = 3.6e-34, P = 3.6e-34
Identities = 70/108 (64%), Positives = 88/108 (81%)
Query: 9 VKIGRPGYRVTKQFDPETKQRSLLFQIEYPEIEDLSKPRHRFMSSFEQRVQPFDKRYQYL 68
VKIGRPGY+VTKQ D E Q+SLLFQI+YPEI + PRHRFMS++EQR++P D+R+QYL
Sbjct: 110 VKIGRPGYKVTKQRDTEMGQQSLLFQIDYPEIAEGVMPRHRFMSAYEQRIEPPDRRWQYL 169
Query: 69 MFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPDSKMFTLQLYFK-SKP 115
+ AAEPYE IAFKVPS EIDK+ KF++HW+ ++K F LQ +FK KP
Sbjct: 170 LMAAEPYETIAFKVPSREIDKAEGKFWTHWNRETKQFFLQFHFKMEKP 217
>FB|FBgn0036314 [details] [associations]
symbol:CG10754 species:7227 "Drosophila melanogaster"
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;ISS]
[GO:0005681 "spliceosomal complex" evidence=ISS] [GO:0005686 "U2
snRNP" evidence=ISS] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0007052
"mitotic spindle organization" evidence=IMP] [GO:0071011
"precatalytic spliceosome" evidence=IDA] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR000690 InterPro:IPR003604
InterPro:IPR015880 InterPro:IPR019134 PROSITE:PS50171 SMART:SM00355
SMART:SM00451 SMART:SM01050 EMBL:AE014296 GO:GO:0007052
GO:GO:0022008 GO:GO:0046872 GO:GO:0008270 GO:GO:0003676
GO:GO:0071011 GO:GO:0000398 GO:GO:0071013 GO:GO:0005686
eggNOG:COG5246 GeneTree:ENSGT00670000097795 KO:K12826 OMA:KWQYLLF
EMBL:AY118970 RefSeq:NP_648603.1 UniGene:Dm.23998 SMR:Q9VU15
IntAct:Q9VU15 MINT:MINT-1611863 STRING:Q9VU15
EnsemblMetazoa:FBtr0075944 GeneID:39456 KEGG:dme:Dmel_CG10754
UCSC:CG10754-RA FlyBase:FBgn0036314 InParanoid:Q9VU15
OrthoDB:EOG4JH9XP GenomeRNAi:39456 NextBio:813737 Uniprot:Q9VU15
Length = 264
Score = 361 (132.1 bits), Expect = 4.1e-33, P = 4.1e-33
Identities = 65/107 (60%), Positives = 86/107 (80%)
Query: 9 VKIGRPGYRVTKQFDPETKQRSLLFQIEYPEIEDLSKPRHRFMSSFEQRVQPFDKRYQYL 68
VKIGRPGYRVTKQ + Q+SLLFQ++YPEI + PRHRFMS++EQ+++P D+++QYL
Sbjct: 111 VKIGRPGYRVTKQRELSNGQQSLLFQVDYPEITESIVPRHRFMSAYEQKIEPPDRKWQYL 170
Query: 69 MFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPDSKMFTLQLYFKSKP 115
+FAAEPYE I FKVPS E++KS KF++HW+ D+K F LQ FK +P
Sbjct: 171 LFAAEPYETIGFKVPSREVEKSEGKFWTHWNRDTKQFFLQFAFKFEP 217
>DICTYBASE|DDB_G0293876 [details] [associations]
symbol:sf3a2 "splicing factor 3A subunit 2"
species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0030532 "small
nuclear ribonucleoprotein complex" evidence=ISS] [GO:0008380 "RNA
splicing" evidence=IEA;ISS] [GO:0005681 "spliceosomal complex"
evidence=IEA;ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] [GO:0000389 "mRNA 3'-splice site recognition"
evidence=ISS] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR003604 InterPro:IPR015880
InterPro:IPR019134 Pfam:PF09732 PROSITE:PS50171 SMART:SM00355
SMART:SM00451 SMART:SM01050 dictyBase:DDB_G0293876
GenomeReviews:CM000155_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0005681
GO:GO:0003676 EMBL:AAFI02000223 GO:GO:0030532 GO:GO:0000389
eggNOG:COG5246 KO:K12826 RefSeq:XP_628923.1 STRING:Q54B65
EnsemblProtists:DDB0233181 GeneID:8629465 KEGG:ddi:DDB_G0293876
OMA:KWQYLLF ProtClustDB:CLSZ2429171 Uniprot:Q54B65
Length = 215
Score = 359 (131.4 bits), Expect = 6.7e-33, P = 6.7e-33
Identities = 71/107 (66%), Positives = 87/107 (81%)
Query: 9 VKIGRPGYRVTKQFDPETKQRSLLFQIEYPEIEDLSKPRHRFMSSFEQRVQPFDKRYQYL 68
+KIGRPGY++ KQ D +T Q SLLFQI+YPEIE +PRHR MS+FEQRV+ +K YQYL
Sbjct: 109 IKIGRPGYKIIKQRDSKTGQLSLLFQIDYPEIESGLQPRHRIMSAFEQRVEQPNKDYQYL 168
Query: 69 MFAAEPYEIIAFKVPSTEIDKST-P--KFFSHWDPDSKMFTLQLYFK 112
+FAAEPYE IAFK+P+ EID++T P KFF+HWD + K FTLQLYFK
Sbjct: 169 LFAAEPYETIAFKIPNKEIDRTTGPDGKFFTHWDRN-KTFTLQLYFK 214
>WB|WBGene00008683 [details] [associations]
symbol:repo-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0009792 "embryo development ending
in birth or egg hatching" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0002009 "morphogenesis of an epithelium"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0071688 "striated muscle myosin
thick filament assembly" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] [GO:0018991 "oviposition" evidence=IMP]
InterPro:IPR000690 InterPro:IPR003604 InterPro:IPR015880
InterPro:IPR019134 PROSITE:PS50171 SMART:SM00355 SMART:SM00451
SMART:SM01050 GO:GO:0005634 GO:GO:0009792 GO:GO:0002009
GO:GO:0006898 GO:GO:0040007 GO:GO:0018991 GO:GO:0002119
GO:GO:0046872 GO:GO:0008270 GO:GO:0071688 GO:GO:0040011
GO:GO:0003676 GO:GO:0040035 GO:GO:0007281 EMBL:Z68297
eggNOG:COG5246 GeneTree:ENSGT00670000097795 HOGENOM:HOG000191688
KO:K12826 OMA:KWQYLLF PIR:T20735 RefSeq:NP_502290.1
ProteinModelPortal:Q19335 DIP:DIP-26535N IntAct:Q19335
MINT:MINT-1044547 STRING:Q19335 PaxDb:Q19335
EnsemblMetazoa:F11A10.2 GeneID:178147 KEGG:cel:CELE_F11A10.2
UCSC:F11A10.2 CTD:178147 WormBase:F11A10.2 InParanoid:Q19335
NextBio:899914 Uniprot:Q19335
Length = 222
Score = 359 (131.4 bits), Expect = 6.7e-33, P = 6.7e-33
Identities = 67/104 (64%), Positives = 85/104 (81%)
Query: 9 VKIGRPGYRVTKQFDPETKQRSLLFQIEYPEIEDLSKPRHRFMSSFEQRVQPFDKRYQYL 68
VKIGRPGY+VTK+ DP Q++LLFQI+YPEI D PRHRFMS++EQ++QP DKR+QYL
Sbjct: 110 VKIGRPGYKVTKERDPGAGQQALLFQIDYPEIADGIAPRHRFMSAYEQKIQPPDKRWQYL 169
Query: 69 MFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPDSKMFTLQLYFK 112
+FAAEPYE I FK+PS E+DKS KF++ W+ D+K F LQ+ FK
Sbjct: 170 LFAAEPYETIGFKIPSREVDKSE-KFWTMWNKDTKQFFLQVAFK 212
>UNIPROTKB|Q19335 [details] [associations]
symbol:repo-1 "Protein REPO-1" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR000690 InterPro:IPR003604 InterPro:IPR015880
InterPro:IPR019134 PROSITE:PS50171 SMART:SM00355 SMART:SM00451
SMART:SM01050 GO:GO:0005634 GO:GO:0009792 GO:GO:0002009
GO:GO:0006898 GO:GO:0040007 GO:GO:0018991 GO:GO:0002119
GO:GO:0046872 GO:GO:0008270 GO:GO:0071688 GO:GO:0040011
GO:GO:0003676 GO:GO:0040035 GO:GO:0007281 EMBL:Z68297
eggNOG:COG5246 GeneTree:ENSGT00670000097795 HOGENOM:HOG000191688
KO:K12826 OMA:KWQYLLF PIR:T20735 RefSeq:NP_502290.1
ProteinModelPortal:Q19335 DIP:DIP-26535N IntAct:Q19335
MINT:MINT-1044547 STRING:Q19335 PaxDb:Q19335
EnsemblMetazoa:F11A10.2 GeneID:178147 KEGG:cel:CELE_F11A10.2
UCSC:F11A10.2 CTD:178147 WormBase:F11A10.2 InParanoid:Q19335
NextBio:899914 Uniprot:Q19335
Length = 222
Score = 359 (131.4 bits), Expect = 6.7e-33, P = 6.7e-33
Identities = 67/104 (64%), Positives = 85/104 (81%)
Query: 9 VKIGRPGYRVTKQFDPETKQRSLLFQIEYPEIEDLSKPRHRFMSSFEQRVQPFDKRYQYL 68
VKIGRPGY+VTK+ DP Q++LLFQI+YPEI D PRHRFMS++EQ++QP DKR+QYL
Sbjct: 110 VKIGRPGYKVTKERDPGAGQQALLFQIDYPEIADGIAPRHRFMSAYEQKIQPPDKRWQYL 169
Query: 69 MFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPDSKMFTLQLYFK 112
+FAAEPYE I FK+PS E+DKS KF++ W+ D+K F LQ+ FK
Sbjct: 170 LFAAEPYETIGFKIPSREVDKSE-KFWTMWNKDTKQFFLQVAFK 212
>UNIPROTKB|G4MKX4 [details] [associations]
symbol:MGG_05375 "Splicing factor 3a subunit 2"
species:242507 "Magnaporthe oryzae 70-15" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000690
InterPro:IPR003604 InterPro:IPR015880 InterPro:IPR019134
PROSITE:PS50171 SMART:SM00355 SMART:SM00451 SMART:SM01050
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 GO:GO:0003676
EMBL:CM001231 KO:K12826 RefSeq:XP_003710221.1
EnsemblFungi:MGG_05375T0 GeneID:2675831 KEGG:mgr:MGG_05375
Uniprot:G4MKX4
Length = 247
Score = 298 (110.0 bits), Expect = 1.9e-26, P = 1.9e-26
Identities = 54/110 (49%), Positives = 78/110 (70%)
Query: 8 AVKIGRPGYRVTKQFDPETKQRSLLFQIEYPEIEDLSKPRHRFMSSFEQRVQPFDKRYQY 67
AVKIGRPGY++TK DP T+ LLFQ+++P+I + P+ + MS+F QRV+ D+ YQY
Sbjct: 126 AVKIGRPGYKITKIRDPVTRAEGLLFQLQFPDISPGTVPKWQVMSAFSQRVEEPDRNYQY 185
Query: 68 LMFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPDSKMFTLQLYFKSKPVE 117
L+ AAEPYE FKVP+ E+DK + F +WDPD+K + +Q+ F ++ E
Sbjct: 186 LLVAAEPYETCGFKVPARELDKREGRMFEYWDPDAKEYWVQVMFMTEREE 235
>UNIPROTKB|F1NDG0 [details] [associations]
symbol:AMH "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR000690 InterPro:IPR003604
InterPro:IPR015880 InterPro:IPR019134 PROSITE:PS50171 SMART:SM00355
SMART:SM00451 SMART:SM01050 GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 GO:GO:0003676 GeneTree:ENSGT00390000006337
EMBL:AADN02041674 EMBL:AADN02066744 EMBL:AADN02066745
EMBL:AADN02041672 EMBL:AADN02041673 EMBL:AADN02066746
EMBL:AADN02066747 EMBL:AADN02066748 IPI:IPI00584809
Ensembl:ENSGALT00000001207 Uniprot:F1NDG0
Length = 141
Score = 291 (107.5 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 54/74 (72%), Positives = 65/74 (87%)
Query: 9 VKIGRPGYRVTKQFDPETKQRSLLFQIEYPEIEDLSKPRHRFMSSFEQRVQPFDKRYQYL 68
VKIGRPGY+VTKQ DPET Q+SLLFQI+YPEI + PRHRFMS++EQR++P D+R+QYL
Sbjct: 68 VKIGRPGYKVTKQRDPETGQQSLLFQIDYPEIAESIMPRHRFMSAYEQRIEPPDRRWQYL 127
Query: 69 MFAAEPYEIIAFKV 82
+ AAEPYE IAFKV
Sbjct: 128 LMAAEPYETIAFKV 141
>UNIPROTKB|F1NUL0 [details] [associations]
symbol:AMH "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR000690 InterPro:IPR003604
InterPro:IPR015880 InterPro:IPR019134 PROSITE:PS50171 SMART:SM00355
SMART:SM00451 SMART:SM01050 GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 GO:GO:0003676 GeneTree:ENSGT00390000006337
EMBL:AADN02041674 EMBL:AADN02066744 EMBL:AADN02066745
EMBL:AADN02041672 EMBL:AADN02041673 EMBL:AADN02066746
EMBL:AADN02066747 EMBL:AADN02066748 IPI:IPI00820760
Ensembl:ENSGALT00000041217 Uniprot:F1NUL0
Length = 329
Score = 291 (107.5 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 54/74 (72%), Positives = 65/74 (87%)
Query: 9 VKIGRPGYRVTKQFDPETKQRSLLFQIEYPEIEDLSKPRHRFMSSFEQRVQPFDKRYQYL 68
VKIGRPGY+VTKQ DPET Q+SLLFQI+YPEI + PRHRFMS++EQR++P D+R+QYL
Sbjct: 68 VKIGRPGYKVTKQRDPETGQQSLLFQIDYPEIAESIMPRHRFMSAYEQRIEPPDRRWQYL 127
Query: 69 MFAAEPYEIIAFKV 82
+ AAEPYE IAFKV
Sbjct: 128 LMAAEPYETIAFKV 141
>ASPGD|ASPL0000030386 [details] [associations]
symbol:AN5530 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR000690 InterPro:IPR003604
InterPro:IPR015880 InterPro:IPR019134 PROSITE:PS50171 SMART:SM00355
SMART:SM00451 SMART:SM01050 GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 GO:GO:0003676 EMBL:BN001305 EMBL:AACD01000094
eggNOG:COG5246 HOGENOM:HOG000191688 KO:K12826 OrthoDB:EOG441TMX
OMA:KWQYLLF RefSeq:XP_663134.1 STRING:Q5B1Q0
EnsemblFungi:CADANIAT00003552 GeneID:2871823 KEGG:ani:AN5530.2
Uniprot:Q5B1Q0
Length = 237
Score = 285 (105.4 bits), Expect = 4.6e-25, P = 4.6e-25
Identities = 56/110 (50%), Positives = 80/110 (72%)
Query: 9 VKIGRPGYRVTKQFDPETKQRSLLFQIEYPEIEDLSKPRHRFMSSFEQRVQ-PFDKRYQY 67
+KIGRPGY++TK DP T+Q LLFQ++Y EI KPR RFMS+FEQ+V+ P DK +QY
Sbjct: 114 IKIGRPGYKITKIRDPLTRQFGLLFQLQYQEITPGVKPRVRFMSAFEQKVEEPPDKNFQY 173
Query: 68 LMFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPDSKMFTLQLYFKSKPVE 117
L+ AAEPY+ FK+ + EID+ ++++ +D DSK F +Q+ FK++ E
Sbjct: 174 LVIAAEPYQTCGFKLQAREIDRREGRYWTWFDEDSKEFWVQIMFKTEREE 223
>UNIPROTKB|E2QXZ1 [details] [associations]
symbol:SF3A2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000690 InterPro:IPR003604
InterPro:IPR015880 InterPro:IPR019134 PROSITE:PS50171 SMART:SM00355
SMART:SM00451 SMART:SM01050 GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 GO:GO:0003676 GeneTree:ENSGT00670000097795
EMBL:AAEX03012610 Ensembl:ENSCAFT00000030867 Uniprot:E2QXZ1
Length = 463
Score = 279 (103.3 bits), Expect = 5.1e-24, P = 5.1e-24
Identities = 61/110 (55%), Positives = 76/110 (69%)
Query: 9 VKIGRPGYRVTKQFDPETKQRSLLFQIEYPEIEDLSKPRHRFMSSFEQRVQPFDKRYQYL 68
VKIGRPGY+VTKQ D E Q+SLLFQI+YPEI + PRHRFMS++EQR++P D+R+QYL
Sbjct: 110 VKIGRPGYKVTKQRDTEMGQQSLLFQIDYPEIAEGIMPRHRFMSAYEQRIEPPDRRWQYL 169
Query: 69 MFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDP--DSKMFTLQLYFK-SKP 115
+ AAEPYE IAFKV + + P+ S F LQ +FK KP
Sbjct: 170 LMAAEPYETIAFKV--VQAGSTDPRGQGPHSALCVSVQFFLQFHFKMEKP 217
>GENEDB_PFALCIPARUM|PFF0970w [details] [associations]
symbol:PFF0970w "splicing factor 3a subunit,
putative" species:5833 "Plasmodium falciparum" [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0008380 "RNA splicing"
evidence=ISS] InterPro:IPR000690 InterPro:IPR003604
InterPro:IPR019134 PROSITE:PS50171 SMART:SM00451 SMART:SM01050
GO:GO:0008380 GO:GO:0046872 GO:GO:0008270 GO:GO:0005681
GO:GO:0003676 EMBL:AL844505 HOGENOM:HOG000191688 KO:K12826
ProtClustDB:CLSZ2429171 RefSeq:XP_966185.1
ProteinModelPortal:C6KT39 EnsemblProtists:PFF0970w:mRNA
GeneID:3885948 KEGG:pfa:PFF0970w EuPathDB:PlasmoDB:PF3D7_0619900
OMA:EFREENI Uniprot:C6KT39
Length = 233
Score = 267 (99.0 bits), Expect = 3.8e-23, P = 3.8e-23
Identities = 49/105 (46%), Positives = 78/105 (74%)
Query: 9 VKIGRPGYRVTKQFDPETKQRSLLFQIEYPEIEDLSKPRHRFMSSFEQRVQPFDKRYQYL 68
VKIG+P Y VT+ + + Q +LF++ +P I++ +KP+ RFMSSFEQ+++ DK+YQYL
Sbjct: 109 VKIGKPRYDVTRVRNKKN-QLGILFELSFPNIKENTKPKFRFMSSFEQKIEAPDKKYQYL 167
Query: 69 MFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPDSKMFTLQLYFKS 113
+FAAEPYE IAFK+P+ +ID++ F+ W K+F +Q++F++
Sbjct: 168 LFAAEPYETIAFKIPNIDIDENEG-FYYKWFDKKKIFVMQIHFQN 211
>UNIPROTKB|C6KT39 [details] [associations]
symbol:PFF0970w "Splicing factor 3a subunit, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0005681 "spliceosomal
complex" evidence=ISS] [GO:0008380 "RNA splicing" evidence=ISS]
InterPro:IPR000690 InterPro:IPR003604 InterPro:IPR019134
PROSITE:PS50171 SMART:SM00451 SMART:SM01050 GO:GO:0008380
GO:GO:0046872 GO:GO:0008270 GO:GO:0005681 GO:GO:0003676
EMBL:AL844505 HOGENOM:HOG000191688 KO:K12826
ProtClustDB:CLSZ2429171 RefSeq:XP_966185.1
ProteinModelPortal:C6KT39 EnsemblProtists:PFF0970w:mRNA
GeneID:3885948 KEGG:pfa:PFF0970w EuPathDB:PlasmoDB:PF3D7_0619900
OMA:EFREENI Uniprot:C6KT39
Length = 233
Score = 267 (99.0 bits), Expect = 3.8e-23, P = 3.8e-23
Identities = 49/105 (46%), Positives = 78/105 (74%)
Query: 9 VKIGRPGYRVTKQFDPETKQRSLLFQIEYPEIEDLSKPRHRFMSSFEQRVQPFDKRYQYL 68
VKIG+P Y VT+ + + Q +LF++ +P I++ +KP+ RFMSSFEQ+++ DK+YQYL
Sbjct: 109 VKIGKPRYDVTRVRNKKN-QLGILFELSFPNIKENTKPKFRFMSSFEQKIEAPDKKYQYL 167
Query: 69 MFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPDSKMFTLQLYFKS 113
+FAAEPYE IAFK+P+ +ID++ F+ W K+F +Q++F++
Sbjct: 168 LFAAEPYETIAFKIPNIDIDENEG-FYYKWFDKKKIFVMQIHFQN 211
>POMBASE|SPBC21C3.05 [details] [associations]
symbol:sap62 "zinc finger protein Sap62" species:4896
"Schizosaccharomyces pombe" [GO:0000245 "spliceosomal complex
assembly" evidence=ISS] [GO:0003723 "RNA binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005681 "spliceosomal
complex" evidence=IEA] [GO:0005686 "U2 snRNP" evidence=ISS]
[GO:0005829 "cytosol" evidence=IDA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR000690 InterPro:IPR003604
InterPro:IPR015880 InterPro:IPR019134 Pfam:PF09732 PROSITE:PS50171
SMART:SM00355 SMART:SM00451 SMART:SM01050 PomBase:SPBC21C3.05
GO:GO:0005829 GO:GO:0046872 EMBL:CU329671 GO:GO:0008270
GenomeReviews:CU329671_GR GO:GO:0005681 GO:GO:0003723 GO:GO:0000245
GO:GO:0005686 eggNOG:COG5246 HOGENOM:HOG000191688 KO:K12826
OrthoDB:EOG441TMX PIR:T50349 RefSeq:NP_596585.1 IntAct:Q9P7L8
STRING:Q9P7L8 EnsemblFungi:SPBC21C3.05.1 GeneID:2540622
KEGG:spo:SPBC21C3.05 OMA:STSEAYW NextBio:20801747 Uniprot:Q9P7L8
Length = 217
Score = 259 (96.2 bits), Expect = 2.6e-22, P = 2.6e-22
Identities = 52/103 (50%), Positives = 77/103 (74%)
Query: 9 VKIGRPGYRVTKQFDPETKQRSLLFQIEYPEIEDLSKPRHRFMSSFEQRVQPFDKRYQYL 68
VKIGRPGY+V+K + E+ + L FQI+YP+IE +KPR+R MS++EQRV+ D+++QYL
Sbjct: 116 VKIGRPGYKVSKIREAESGKFGLRFQIKYPDIEVNAKPRYRIMSAYEQRVEAPDRKFQYL 175
Query: 69 MFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPDSKMFTLQLYF 111
+ AAEPYE IAFK ID++ KF+S+WD + +T+Q ++
Sbjct: 176 VVAAEPYESIAFK-----IDRAPGKFWSYWDAPT--YTIQFFY 211
>CGD|CAL0004398 [details] [associations]
symbol:orf19.4724 species:5476 "Candida albicans" [GO:0071004
"U2-type prespliceosome" evidence=IEA] [GO:0000245 "spliceosomal
complex assembly" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR015880 SMART:SM00355 CGD:CAL0004398
GO:GO:0008270 GO:GO:0005622 EMBL:AACQ01000001 EMBL:AACQ01000002
eggNOG:COG5246 KO:K12826 RefSeq:XP_723221.1 RefSeq:XP_723411.1
STRING:Q5APP1 GeneID:3634931 GeneID:3634956 KEGG:cal:CaO19.12187
KEGG:cal:CaO19.4724 Uniprot:Q5APP1
Length = 256
Score = 109 (43.4 bits), Expect = 3.5e-14, Sum P(2) = 3.5e-14
Identities = 24/58 (41%), Positives = 36/58 (62%)
Query: 62 DKRYQYLMFAAEPYEIIAFKVPST-EIDKS------TPKFFSHWDPDSKMFTLQLYFK 112
D +YQYL+ +AEPY+ IA +P+ EIDK + ++ +WD D+K F LQ +K
Sbjct: 198 DNKYQYLVVSAEPYDNIAIVIPNKHEIDKPLEENKMSDSYWWYWDNDTKEFFLQFLYK 255
Score = 96 (38.9 bits), Expect = 3.5e-14, Sum P(2) = 3.5e-14
Identities = 20/46 (43%), Positives = 30/46 (65%)
Query: 10 KIGRPGYRVTKQFDPETKQRSLLFQIEYPEIEDLSKPRHRFMSSFE 55
KIG+P Y++TK DPET + +L I+ P+I + +P R MS +E
Sbjct: 119 KIGKPIYKITKVRDPETLRTGILVNIKLPKIT-VKEPMFRIMSYYE 163
>UNIPROTKB|K7EMT0 [details] [associations]
symbol:SF3A2 "Splicing factor 3A subunit 2" species:9606
"Homo sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR000690 InterPro:IPR003604
InterPro:IPR015880 PROSITE:PS50171 SMART:SM00355 SMART:SM00451
EMBL:AC005263 HGNC:HGNC:10766 Ensembl:ENST00000586396
Uniprot:K7EMT0
Length = 136
Score = 101 (40.6 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 20/27 (74%), Positives = 23/27 (85%)
Query: 9 VKIGRPGYRVTKQFDPETKQRSLLFQI 35
VKIGRPGY+VTKQ D E Q+SLLFQ+
Sbjct: 110 VKIGRPGYKVTKQRDSEMGQQSLLFQV 136
>UNIPROTKB|K7EP23 [details] [associations]
symbol:SF3A2 "Splicing factor 3A subunit 2" species:9606
"Homo sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR000690 InterPro:IPR003604
InterPro:IPR015880 PROSITE:PS50171 SMART:SM00355 SMART:SM00451
EMBL:AC005263 HGNC:HGNC:10766 Ensembl:ENST00000591121
Uniprot:K7EP23
Length = 135
Score = 98 (39.6 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 20/26 (76%), Positives = 22/26 (84%)
Query: 9 VKIGRPGYRVTKQFDPETKQRSLLFQ 34
VKIGRPGY+VTKQ D E Q+SLLFQ
Sbjct: 110 VKIGRPGYKVTKQRDSEMGQQSLLFQ 135
>UNIPROTKB|K7EKV8 [details] [associations]
symbol:SF3A2 "Splicing factor 3A subunit 2" species:9606
"Homo sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR000690 InterPro:IPR003604
InterPro:IPR015880 PROSITE:PS50171 SMART:SM00355 SMART:SM00451
EMBL:CH471139 EMBL:AC005263 HGNC:HGNC:10766 Ensembl:ENST00000592314
Uniprot:K7EKV8
Length = 162
Score = 101 (40.6 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 20/27 (74%), Positives = 23/27 (85%)
Query: 9 VKIGRPGYRVTKQFDPETKQRSLLFQI 35
VKIGRPGY+VTKQ D E Q+SLLFQ+
Sbjct: 110 VKIGRPGYKVTKQRDSEMGQQSLLFQV 136
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.136 0.413 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 237 141 0.00091 102 3 11 22 0.42 31
30 0.47 33
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 23
No. of states in DFA: 572 (61 KB)
Total size of DFA: 135 KB (2085 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 13.08u 0.09s 13.17t Elapsed: 00:00:01
Total cpu time: 13.08u 0.09s 13.17t Elapsed: 00:00:01
Start: Fri May 10 19:15:15 2013 End: Fri May 10 19:15:16 2013