Query 026551
Match_columns 237
No_of_seqs 157 out of 199
Neff 3.4
Searched_HMMs 13730
Date Mon Mar 25 16:17:01 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026551.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/026551hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2gysa4 b.1.2.1 (A:317-416) Co 44.9 6.9 0.0005 25.6 2.7 36 66-101 62-97 (100)
2 d1f3va_ d.58.22.1 (A:) TRADD, 36.5 4.8 0.00035 31.9 0.8 37 12-55 48-84 (158)
3 d1tvca1 b.43.4.2 (A:2-110) Met 30.2 22 0.0016 24.3 3.5 35 4-40 1-35 (109)
4 d1xmwa2 b.1.1.4 (A:113-178) CD 29.2 45 0.0032 22.6 4.9 19 93-113 48-66 (66)
5 d1erna2 b.1.2.1 (A:117-221) Er 27.4 25 0.0018 22.8 3.3 39 63-101 61-99 (105)
6 d1axib2 b.1.2.1 (B:131-236) Gr 26.6 79 0.0058 20.6 6.0 38 61-101 61-98 (106)
7 d1flga_ b.70.1.1 (A:) Ethanol 25.7 37 0.0027 29.4 5.0 10 63-72 539-548 (582)
8 d1jb7a2 b.40.4.3 (A:205-328) T 22.9 24 0.0017 26.7 2.7 55 26-87 45-101 (124)
9 d1r75a_ b.134.1.1 (A:) Unnamed 20.6 27 0.002 25.9 2.6 31 76-112 20-50 (121)
10 d3d85d3 b.1.2.1 (D:212-305) Th 19.5 45 0.0033 21.7 3.4 20 79-100 72-91 (94)
No 1
>d2gysa4 b.1.2.1 (A:317-416) Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors {Human (Homo sapiens) [TaxId: 9606]}
Probab=44.91 E-value=6.9 Score=25.58 Aligned_cols=36 Identities=17% Similarity=0.175 Sum_probs=20.6
Q ss_pred cEEEEEecCCccceeeecCcccccCCCcceeeecCC
Q 026551 66 QYLMFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPD 101 (237)
Q Consensus 66 QYLv~AaEPYEtIaFKIPn~EIDk~~~k~wt~WD~d 101 (237)
.|.|---+|...=.|+|=++..+-....+|+.|-+.
T Consensus 62 ~~~l~~L~p~t~Y~~rVRa~~~~g~~~g~WSeWS~~ 97 (100)
T d2gysa4 62 SMALPALEPSTRYWARVRVRTSRTGYNGIWSEWSEA 97 (100)
T ss_dssp EEECCCCCSSCCCEEEEEEEECCTTCCBCCCCCCCC
T ss_pred EEEeCCCCCCCeEEEEEEEEECCCCCCCCccCCCCC
Confidence 444444556655566664444332234689999765
No 2
>d1f3va_ d.58.22.1 (A:) TRADD, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=36.53 E-value=4.8 Score=31.94 Aligned_cols=37 Identities=16% Similarity=0.356 Sum_probs=30.8
Q ss_pred CCCCceEEEeeCCCCCceeeEEEEEcCCccCCCCcceeeecccc
Q 026551 12 GRPGYRVTKQFDPETKQRSLLFQIEYPEIEDLSKPRHRFMSSFE 55 (237)
Q Consensus 12 GRPgYKVTK~rDpeT~q~gLlfqVdYPei~~g~~Pr~RfMSayE 55 (237)
|+-+|.|-||.|.+-. |.+|+.| -+..+..||..+|-
T Consensus 48 ~~d~~eiLKiH~sdpq---LiVqLkF----c~~~~C~RFL~sYr 84 (158)
T d1f3va_ 48 SPDVLQMLKIHRSDPQ---LIVQLRF----CGRQPCGRFLRAYR 84 (158)
T ss_dssp CTTTEEEEEEEECSSS---EEEEEEE----ESHHHHHHHHHHHH
T ss_pred CcchhHhhheecCCCe---eEEEEEe----cCcHHHHHHHHHHh
Confidence 6779999999997664 8999999 44688999998884
No 3
>d1tvca1 b.43.4.2 (A:2-110) Methane monooxygenase component C, MmoC {Methylococcus capsulatus [TaxId: 414]}
Probab=30.25 E-value=22 Score=24.33 Aligned_cols=35 Identities=11% Similarity=0.025 Sum_probs=25.1
Q ss_pred cCcceeEeCCCCceEEEeeCCCCCceeeEEEEEcCCc
Q 026551 4 CGAYAVKIGRPGYRVTKQFDPETKQRSLLFQIEYPEI 40 (237)
Q Consensus 4 ~~kk~vKIGRPgYKVTK~rDpeT~q~gLlfqVdYPei 40 (237)
|+..+.+|++=..+|+++++...+- +.|.++.++.
T Consensus 1 c~~~~~~~~~~~a~V~~~~~lt~di--~~l~l~~p~~ 35 (109)
T d1tvca1 1 CRISFGEVGSFEAEVVGLNWVSSNT--VQFLLQKRPD 35 (109)
T ss_dssp CCCCSCCSSEEEEEBCCCEEEETTE--EEEEECSSTT
T ss_pred CceecccceeEEEEEEEEEEeCCCe--EEEEEECCCc
Confidence 7888888888888999998876663 4455555543
No 4
>d1xmwa2 b.1.1.4 (A:113-178) CD3 epsilon chain ectodomain fragment {Sheep (Ovis aries) [TaxId: 9940]}
Probab=29.17 E-value=45 Score=22.63 Aligned_cols=19 Identities=32% Similarity=0.642 Sum_probs=12.6
Q ss_pred cceeeecCCCCEEEEEEeecc
Q 026551 93 KFFSHWDPDSKMFTLQLYFKS 113 (237)
Q Consensus 93 k~wt~WD~dtK~F~LQf~Fk~ 113 (237)
-||+. ..+|.-+||+||++
T Consensus 48 iY~C~--~~~~~~~lQVyYRM 66 (66)
T d1xmwa2 48 MYQCG--ENAKSFTLQVYYRM 66 (66)
T ss_dssp EEECC--SSSCCCEEEEEECC
T ss_pred ceECC--CCCcceeEEEEEeC
Confidence 45552 22567799999975
No 5
>d1erna2 b.1.2.1 (A:117-221) Erythropoietin (EPO) receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=27.37 E-value=25 Score=22.83 Aligned_cols=39 Identities=18% Similarity=0.256 Sum_probs=23.5
Q ss_pred CCccEEEEEecCCccceeeecCcccccCCCcceeeecCC
Q 026551 63 KRYQYLMFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPD 101 (237)
Q Consensus 63 k~~QYLv~AaEPYEtIaFKIPn~EIDk~~~k~wt~WD~d 101 (237)
...+|+|...++..+-.|+|=++.-......+|+.|-..
T Consensus 61 ~~t~~~i~~L~p~t~Y~~rVRar~~~~~~~G~WSeWS~~ 99 (105)
T d1erna2 61 GRTECVLSNLRGRTRYTFAVRARMAEPSFGGFWSAWSEP 99 (105)
T ss_dssp TCCEEEECSCCSSCEEEEEEEEEECSSSCCBCCCCCCCC
T ss_pred CccEEEEeCCCCCcEEEEEEEEEECCCCCCCCCCCCCCC
Confidence 334566666777777777775543222223578888653
No 6
>d1axib2 b.1.2.1 (B:131-236) Growth hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=26.63 E-value=79 Score=20.59 Aligned_cols=38 Identities=5% Similarity=-0.011 Sum_probs=27.2
Q ss_pred CCCCccEEEEEecCCccceeeecCcccccCCCcceeeecCC
Q 026551 61 FDKRYQYLMFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPD 101 (237)
Q Consensus 61 pDk~~QYLv~AaEPYEtIaFKIPn~EIDk~~~k~wt~WD~d 101 (237)
..+..+|+|.--+++..=.|+|=++. ..+.+|..|-..
T Consensus 61 ~~~~~~~~i~~L~~~t~Y~frVRa~~---~~~g~ws~wS~~ 98 (106)
T d1axib2 61 PILTTSVPVYSLKVDKEYEVRVRSKQ---RNSGNYGEFSEV 98 (106)
T ss_dssp CBSSSEEEEEEEETTSCEEEEEEEEE---TTSSCCCCCCCC
T ss_pred ecccceEEECCCCCCCEEEEEEEEEE---CCCCCCCCCCCC
Confidence 35566788888888888888885543 235688888765
No 7
>d1flga_ b.70.1.1 (A:) Ethanol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}
Probab=25.67 E-value=37 Score=29.39 Aligned_cols=10 Identities=30% Similarity=0.288 Sum_probs=8.7
Q ss_pred CCccEEEEEe
Q 026551 63 KRYQYLMFAA 72 (237)
Q Consensus 63 k~~QYLv~Aa 72 (237)
+.+|||+|++
T Consensus 539 ~G~qYv~i~a 548 (582)
T d1flga_ 539 DGEQYLGVTV 548 (582)
T ss_dssp TTEEEEEEEE
T ss_pred CCEEEEEEEe
Confidence 5789999997
No 8
>d1jb7a2 b.40.4.3 (A:205-328) Telomere end binding protein alpha subunit {Oxytricha nova [TaxId: 200597]}
Probab=22.88 E-value=24 Score=26.70 Aligned_cols=55 Identities=18% Similarity=0.280 Sum_probs=39.4
Q ss_pred CCc--eeeEEEEEcCCccCCCCcceeeecccccccCCCCCCccEEEEEecCCccceeeecCccc
Q 026551 26 TKQ--RSLLFQIEYPEIEDLSKPRHRFMSSFEQRVQPFDKRYQYLMFAAEPYEIIAFKVPSTEI 87 (237)
Q Consensus 26 T~q--~gLlfqVdYPei~~g~~Pr~RfMSayEQkvE~pDk~~QYLv~AaEPYEtIaFKIPn~EI 87 (237)
||| .++++...||.+.+|..=|+|=.++=|- ......|+++ .|.||---|.+..|
T Consensus 45 sgqtw~t~~~k~KFPhl~~G~vvRIRSat~det-----st~kk~L~lS--hySNImtF~s~Skl 101 (124)
T d1jb7a2 45 SGQVFYTLSLKLKFPHVRTGEVVRIRSATYDET-----STQKKVLILS--HYSNIITFIQSSKL 101 (124)
T ss_dssp TCCEEEEEEETTTCTTCCTTCEEEEEEEEECTT-----CCSSCEEEEE--EEEEEEEECTTCHH
T ss_pred CCCEeehhhhhhcCCccccCceEEEEeeecccc-----cccceeEEee--cccceeEEecHHHH
Confidence 454 5778888999998888776666555443 3345678887 79999887877544
No 9
>d1r75a_ b.134.1.1 (A:) Unnamed hypothetical protein {Leishmania major [TaxId: 5664]}
Probab=20.61 E-value=27 Score=25.85 Aligned_cols=31 Identities=16% Similarity=0.412 Sum_probs=19.0
Q ss_pred ccceeeecCcccccCCCcceeeecCCCCEEEEEEeec
Q 026551 76 EIIAFKVPSTEIDKSTPKFFSHWDPDSKMFTLQLYFK 112 (237)
Q Consensus 76 EtIaFKIPn~EIDk~~~k~wt~WD~dtK~F~LQf~Fk 112 (237)
..+.|+| || .+++.|.+.| ||+.|.+++.+.
T Consensus 20 nGlLfRi----V~-~~~~~WaFYN-DT~~y~m~V~~~ 50 (121)
T d1r75a_ 20 SNILYRI----AD-TEARRWAFYN-DSKELIIHVAVL 50 (121)
T ss_dssp TTSEEEE----EE-TTTTEEEEEE-CCSSEEEEEEEE
T ss_pred CcEEEEE----Ee-CCCCEEEEEe-CCCcEEEEEEEE
Confidence 5666666 33 3456777665 777776666554
No 10
>d3d85d3 b.1.2.1 (D:212-305) The p40 domain of interleukin-12 (IL-12 beta chain), domains 2 and 3 {Human (Homo sapiens) [TaxId: 9606]}
Probab=19.53 E-value=45 Score=21.70 Aligned_cols=20 Identities=15% Similarity=0.343 Sum_probs=10.7
Q ss_pred eeeecCcccccCCCcceeeecC
Q 026551 79 AFKVPSTEIDKSTPKFFSHWDP 100 (237)
Q Consensus 79 aFKIPn~EIDk~~~k~wt~WD~ 100 (237)
.|.|=++.. ....+|+.|-.
T Consensus 72 ~v~VRa~~~--~~~g~WSeWS~ 91 (94)
T d3d85d3 72 SISVRAQDR--YYSSSWSEWAS 91 (94)
T ss_dssp EEEEEEEES--SSCCCCCCCEE
T ss_pred EEEEEEecC--CCCCCCccCcC
Confidence 555544432 22358888853
Done!