BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026554
(237 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P93732|PIP_ARATH Proline iminopeptidase OS=Arabidopsis thaliana GN=PIP PE=2 SV=3
Length = 380
Score = 397 bits (1020), Expect = e-110, Method: Compositional matrix adjust.
Identities = 186/223 (83%), Positives = 203/223 (91%), Gaps = 1/223 (0%)
Query: 15 LYPYVEPYSTGILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTTPSNRRFFDPDFYRI 74
LY +EPYS+G LKVSD+HT+YWEQSG P GHPVVFLHGGPGGGT PSNRRFFDP+FYRI
Sbjct: 66 LYAPIEPYSSGNLKVSDVHTLYWEQSGKPDGHPVVFLHGGPGGGTAPSNRRFFDPEFYRI 125
Query: 75 ILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAH 134
+LFDQRGAGKSTPHACL++NTTWDL++DIEKLR+HL+IPEW VFGGSWGSTLALAYS +H
Sbjct: 126 VLFDQRGAGKSTPHACLEENTTWDLVNDIEKLREHLKIPEWLVFGGSWGSTLALAYSQSH 185
Query: 135 PDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENER-SCFVDAYSKRL 193
PDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWE FRDLIPENER S VDAY KRL
Sbjct: 186 PDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWEEFRDLIPENERGSSLVDAYHKRL 245
Query: 194 NSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLV 236
NSDD E QYAAARAWTKWEMMTA+L PN EN+++ EDD FSL
Sbjct: 246 NSDDLEIQYAAARAWTKWEMMTAYLRPNLENVQKAEDDKFSLA 288
>sp|O83041|PIP_PLEBO Probable proline iminopeptidase OS=Plectonema boryanum GN=pip PE=3
SV=1
Length = 321
Score = 269 bits (688), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 135/221 (61%), Positives = 165/221 (74%)
Query: 14 NLYPYVEPYSTGILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTTPSNRRFFDPDFYR 73
LYP + PY +G+L VS +HTIY+EQSGNP G PVVFLHGGPGGGT P+ R++FDP +R
Sbjct: 3 QLYPAIAPYQSGMLPVSALHTIYYEQSGNPNGKPVVFLHGGPGGGTIPTYRQYFDPSKWR 62
Query: 74 IILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLA 133
IILFDQRGAGKSTPHA L +NTTWDL+ DIEKLR HL I W VFGGSWGSTL+LAYS
Sbjct: 63 IILFDQRGAGKSTPHAELRENTTWDLVSDIEKLRSHLNIDRWFVFGGSWGSTLSLAYSQT 122
Query: 134 HPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRL 193
HPD+ GL+LRGIFLLR+KEI WFY+ GA+ I+PDAWE + + IP ER + AY +RL
Sbjct: 123 HPDRCLGLILRGIFLLRRKEILWFYQDGASWIFPDAWEHYLEPIPPEERDDMISAYYRRL 182
Query: 194 NSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFS 234
S D E + AA+AW+ WE T+ L+ + + DD F+
Sbjct: 183 TSKDAEIRSTAAKAWSVWEGTTSRLIVDPSLQSKFADDEFA 223
>sp|Q87DF8|PIP_XYLFT Proline iminopeptidase OS=Xylella fastidiosa (strain Temecula1 /
ATCC 700964) GN=pip PE=3 SV=1
Length = 313
Score = 263 bits (672), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 126/223 (56%), Positives = 159/223 (71%)
Query: 14 NLYPYVEPYSTGILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTTPSNRRFFDPDFYR 73
LYP V P+ G+L V D H +Y+EQ GNP G PVV LHGGPGGG RRF DPD YR
Sbjct: 3 TLYPEVTPFDHGMLCVDDSHRLYYEQCGNPHGKPVVILHGGPGGGCNDKMRRFHDPDKYR 62
Query: 74 IILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLA 133
I+LFDQRGAG+S PHA L NTTWDL+ DIEKLR L I WQVFGGSWGSTLALAY+
Sbjct: 63 IVLFDQRGAGRSMPHANLTNNTTWDLVADIEKLRVALGITRWQVFGGSWGSTLALAYAQT 122
Query: 134 HPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRL 193
HP++ T LVLRGIF+LR+ E++WFY+ GA+ ++PDAW+ + IP ER + A+ +RL
Sbjct: 123 HPEQTTELVLRGIFMLRRWELEWFYQEGASRLFPDAWDRYIAAIPPVERHDLISAFHRRL 182
Query: 194 NSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLV 236
SDD+ T+ AAA+AW+ WE T+ L +++ I E+ F+L
Sbjct: 183 TSDDEATRLAAAQAWSLWEGATSCLYMDQDFIASHENPHFALA 225
>sp|Q9PD69|PIP_XYLFA Proline iminopeptidase OS=Xylella fastidiosa (strain 9a5c) GN=pip
PE=3 SV=1
Length = 313
Score = 263 bits (671), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 126/222 (56%), Positives = 160/222 (72%)
Query: 15 LYPYVEPYSTGILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTTPSNRRFFDPDFYRI 74
LYP V P+ GIL V D H +Y+EQ GNP G PVV LHGGPG G RRF DPD YRI
Sbjct: 4 LYPEVTPFEHGILCVDDNHRLYYEQCGNPHGKPVVILHGGPGSGCNDKMRRFHDPDKYRI 63
Query: 75 ILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAH 134
+LFDQRGAG+STPHA L NTTWDL+ DIEKLR L I WQVFGGSWGSTLALAY+ H
Sbjct: 64 VLFDQRGAGRSTPHANLTNNTTWDLVADIEKLRVALGITRWQVFGGSWGSTLALAYAQTH 123
Query: 135 PDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRLN 194
P++ T LVLRGIF+LR+ E++WFY+ GA+ ++PDAW+ + +IP ER + A+ +RL
Sbjct: 124 PEQTTELVLRGIFMLRRWELEWFYQEGASHLFPDAWDRYIAVIPPVERHDLISAFHRRLT 183
Query: 195 SDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLV 236
S+D+ T+ AAA+AW+ WE T+ L +++ I E+ F+L
Sbjct: 184 SEDEATRLAAAQAWSLWEGATSCLYMDQDFIASHENPHFALA 225
>sp|P52279|PIP_XANCI Proline iminopeptidase OS=Xanthomonas campestris pv. citri GN=pip
PE=1 SV=2
Length = 313
Score = 259 bits (663), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 126/223 (56%), Positives = 158/223 (70%)
Query: 14 NLYPYVEPYSTGILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTTPSNRRFFDPDFYR 73
LYP + PY G LKV D HT+Y+EQ GNP G PVV LHGGPGGG RRF DP YR
Sbjct: 3 TLYPEITPYQQGSLKVDDRHTLYFEQCGNPHGKPVVMLHGGPGGGCNDKMRRFHDPAKYR 62
Query: 74 IILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLA 133
I+LFDQRG+G+STPHA L NTTWDL+ DIE+LR HL + WQVFGGSWGSTLALAY+
Sbjct: 63 IVLFDQRGSGRSTPHADLVDNTTWDLVADIERLRTHLGVDRWQVFGGSWGSTLALAYAAD 122
Query: 134 HPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRL 193
LVLRGIFLLR+ E++WFY+ GA+ ++PDAWE + + IP ER+ + A+ +RL
Sbjct: 123 PSAAGHQLVLRGIFLLRRFELEWFYQEGASRLFPDAWEHYLNAIPPVERADLMSAFHRRL 182
Query: 194 NSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSLV 236
SDD+ T+ AAA+AW+ WE T+ L +E+ + ED F+L
Sbjct: 183 TSDDEATRLAAAKAWSVWEGATSFLHVDEDFVTGHEDAHFALA 225
>sp|O32449|PIP_SERMA Proline iminopeptidase OS=Serratia marcescens GN=pip PE=1 SV=1
Length = 317
Score = 252 bits (643), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 113/219 (51%), Positives = 152/219 (69%)
Query: 14 NLYPYVEPYSTGILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTTPSNRRFFDPDFYR 73
LYP + Y +G L D H IYWE SGNP G P VF+HGGPGGG +P +R+ FDP+ Y+
Sbjct: 6 GLYPPLAAYDSGWLDTGDGHRIYWELSGNPNGKPAVFIHGGPGGGISPHHRQLFDPERYK 65
Query: 74 IILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLA 133
++LFDQRG G+S PHA LD NTTW L+ DIE+LR+ + +W VFGGSWGSTLALAY+
Sbjct: 66 VLLFDQRGCGRSRPHASLDNNTTWHLVADIERLREMAGVEQWLVFGGSWGSTLALAYAQT 125
Query: 134 HPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRL 193
HP++V+ +VLRGIF LRK+ + W+Y+ GA+ +P+ WE ++ ++ER + AY +RL
Sbjct: 126 HPERVSEMVLRGIFTLRKQRLHWYYQDGASRFFPEKWERVLSILSDDERKDVIAAYRQRL 185
Query: 194 NSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDI 232
S D + Q AA+ W+ WE T LLP+ E+ GEDD
Sbjct: 186 TSADPQVQLEAAKLWSVWEGETVTLLPSRESASFGEDDF 224
>sp|Q9JUV1|PIP_NEIMA Proline iminopeptidase OS=Neisseria meningitidis serogroup A /
serotype 4A (strain Z2491) GN=pip PE=3 SV=1
Length = 310
Score = 240 bits (613), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 111/209 (53%), Positives = 144/209 (68%), Gaps = 1/209 (0%)
Query: 15 LYPYVEPYSTGILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTTPSNRRFFDPDFYRI 74
+Y +P+ +G L+VS+IH IYWE+SGNP G PV+FLHGGPG G +P R FF+PD +RI
Sbjct: 1 MYEIKQPFHSGYLQVSEIHQIYWEESGNPDGVPVIFLHGGPGAGASPECRGFFNPDVFRI 60
Query: 75 ILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAH 134
++ DQRG G+S P+AC + NTTWDL+ DIEK+R+ L I +W VFGGSWGSTL+LAY+ H
Sbjct: 61 VIIDQRGCGRSRPYACAEDNTTWDLVADIEKVREMLGIGKWLVFGGSWGSTLSLAYAQTH 120
Query: 135 PDKVTGLVLRGIFLLRKKEIDWFYE-GGAAAIYPDAWESFRDLIPENERSCFVDAYSKRL 193
P++V GLVLRGIFL R E W E GG + IYP+ W+ F I EN R+ ++AY L
Sbjct: 121 PERVKGLVLRGIFLCRPSETVWLNEAGGVSRIYPEQWQKFVAPIAENRRNQLIEAYHGLL 180
Query: 194 NSDDKETQYAAARAWTKWEMMTAHLLPNE 222
D+E +AA+AW WE P E
Sbjct: 181 FHQDEEVCLSAAKAWADWESYLIRFEPEE 209
>sp|Q9JZR6|PIP_NEIMB Proline iminopeptidase OS=Neisseria meningitidis serogroup B
(strain MC58) GN=pip PE=3 SV=1
Length = 310
Score = 240 bits (612), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 111/209 (53%), Positives = 144/209 (68%), Gaps = 1/209 (0%)
Query: 15 LYPYVEPYSTGILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTTPSNRRFFDPDFYRI 74
+Y +P+ +G L+VS+IH IYWE+SGNP G PV+FLHGGPG G +P R FF+PD +RI
Sbjct: 1 MYEIKQPFHSGYLQVSEIHQIYWEESGNPDGVPVIFLHGGPGAGASPECRGFFNPDVFRI 60
Query: 75 ILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAH 134
++ DQRG G+S P+AC + NTTWDL+ DIEK+R+ L I +W VFGGSWGSTL+LAY+ H
Sbjct: 61 VIIDQRGCGRSRPYACAEDNTTWDLVADIEKVREMLGIGKWLVFGGSWGSTLSLAYAQTH 120
Query: 135 PDKVTGLVLRGIFLLRKKEIDWFYE-GGAAAIYPDAWESFRDLIPENERSCFVDAYSKRL 193
P++V GLVLRGIFL R E W E GG + IYP+ W+ F I EN R+ ++AY L
Sbjct: 121 PERVKGLVLRGIFLCRPSETVWLNEAGGVSRIYPEQWQKFVAPIAENRRNRLIEAYHGLL 180
Query: 194 NSDDKETQYAAARAWTKWEMMTAHLLPNE 222
D+E +AA+AW WE P E
Sbjct: 181 FHQDEEVCLSAAKAWADWESYLIRFEPEE 209
>sp|P42786|PIP_NEIGO Proline iminopeptidase OS=Neisseria gonorrhoeae GN=pip PE=1 SV=1
Length = 310
Score = 238 bits (608), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 110/207 (53%), Positives = 143/207 (69%), Gaps = 1/207 (0%)
Query: 15 LYPYVEPYSTGILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTTPSNRRFFDPDFYRI 74
+Y +P+ +G L+VS+IH IYWE+SGNP G PV+FLHGGPG G +P R FF+PD +RI
Sbjct: 1 MYEIKQPFHSGYLQVSEIHQIYWEESGNPDGVPVIFLHGGPGAGASPECRGFFNPDVFRI 60
Query: 75 ILFDQRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAH 134
++ DQRG G+S P+AC + NTTWDL+ DIEK+R+ L I +W VFGGSWGSTL+LAY+ H
Sbjct: 61 VIIDQRGCGRSHPYACAEDNTTWDLVADIEKVREMLGIGKWLVFGGSWGSTLSLAYAQTH 120
Query: 135 PDKVTGLVLRGIFLLRKKEIDWFYE-GGAAAIYPDAWESFRDLIPENERSCFVDAYSKRL 193
P++V GLVLRGIFL R E W E GG + IYP+ W+ F I EN R+ ++AY L
Sbjct: 121 PERVKGLVLRGIFLCRPSETAWLNEAGGVSRIYPEQWQKFVAPIAENRRNRLIEAYHGLL 180
Query: 194 NSDDKETQYAAARAWTKWEMMTAHLLP 220
D+E +AA+AW WE P
Sbjct: 181 FHQDEEVCLSAAKAWADWESYLIRFEP 207
>sp|Q9S2L4|PIP_STRCO Probable proline iminopeptidase OS=Streptomyces coelicolor (strain
ATCC BAA-471 / A3(2) / M145) GN=SCO1989 PE=3 SV=1
Length = 323
Score = 177 bits (450), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 100/228 (43%), Positives = 128/228 (56%), Gaps = 9/228 (3%)
Query: 14 NLYPYVEPYSTGILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTTPSNRRFFDPDFYR 73
+LYP +EPY G+L V D + +YWE GNP G P V LHGGPG +P RR+FDP YR
Sbjct: 2 SLYPEIEPYDHGMLDVGDGNHVYWETCGNPHGKPAVVLHGGPGSRASPGLRRYFDPAAYR 61
Query: 74 IILFDQRGAGKSTPHAC-----LDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLAL 128
I+L DQRGAG+S P A + NTT L+ D+E+LR HL I W V+G SWGS L L
Sbjct: 62 IVLLDQRGAGRSLPRASAPDTDMSVNTTAHLMADLERLRVHLGIERWLVWGVSWGSVLGL 121
Query: 129 AYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENER-SCFVD 187
Y+ HP VT LVL G+ E+ G I+P+A E F +P + R
Sbjct: 122 RYAQTHPGVVTELVLTGVATGSNAEVALLTR-GLGNIFPEAHERFLAELPPDARDGNLPA 180
Query: 188 AYSKRLNSDDKETQYAAARAWTKWEMMTAHLLPNEENIKRGEDDIFSL 235
AY++ L S D + AARAWT WE T P ++ R +D F +
Sbjct: 181 AYNRLLESPDPAVRERAARAWTDWETATIPAPPG--SVARYQDPDFRM 226
>sp|P75092|PIP_MYCPN Putative proline iminopeptidase OS=Mycoplasma pneumoniae (strain
ATCC 29342 / M129) GN=pip PE=3 SV=1
Length = 309
Score = 154 bits (390), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 78/197 (39%), Positives = 111/197 (56%), Gaps = 3/197 (1%)
Query: 19 VEPYSTGILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTTPSNRRFFDPDFYRIILFD 78
P +G LKV + H +Y+ +GNP G +++HGGPG GT ++FD D +IL D
Sbjct: 3 TSPKQSGYLKVGNGHEVYFWTAGNPQGKSALYVHGGPGSGTDAGCLKYFDLDTTYVILLD 62
Query: 79 QRGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKV 138
QRG G+S L NTT DL+ D+E LRQHL++ W +FGGSWGSTLAL Y++ HP V
Sbjct: 63 QRGCGQSKAVNPLLHNTTQDLVGDLEALRQHLKLERWTLFGGSWGSTLALVYAITHPQVV 122
Query: 139 TGLVLRGIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENER---SCFVDAYSKRLNS 195
+ LR +FL R+++ G YP ++ IP+ R + F + + + L
Sbjct: 123 EQVFLRALFLGREQDWAEMLLGLGKLFYPYEHQTLLKAIPQACRTDFTKFTNYFYEVLQG 182
Query: 196 DDKETQYAAARAWTKWE 212
+D + A AW KWE
Sbjct: 183 NDSALKTQLANAWVKWE 199
>sp|P47266|PIP_MYCGE Putative proline iminopeptidase OS=Mycoplasma genitalium (strain
ATCC 33530 / G-37 / NCTC 10195) GN=pip PE=3 SV=1
Length = 308
Score = 150 bits (379), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 78/191 (40%), Positives = 104/191 (54%), Gaps = 3/191 (1%)
Query: 25 GILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTTPSNRRFFDPDFYRIILFDQRGAGK 84
G L V D H +Y+ GNP G PV+++HGGPG GT ++FD + IIL DQRG GK
Sbjct: 9 GYLNVGDNHQLYYWTQGNPNGKPVLYIHGGPGSGTDEGCLKYFDLETTWIILLDQRGCGK 68
Query: 85 STPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLR 144
S + +N T L+ D E LRQ L I W +FGGSWGS LAL Y++ HP V + LR
Sbjct: 69 SKTNDIFYENNTDKLVSDFEILRQKLNIKNWTLFGGSWGSALALVYAIKHPQVVDKIFLR 128
Query: 145 GIFLLRKKEIDWFYEGGAAAIYPDAWESFRDLIP---ENERSCFVDAYSKRLNSDDKETQ 201
+FL R+K+ G YP + F D IP +N V+ + + D+ T+
Sbjct: 129 ALFLAREKDWSEALMGLGKMFYPYEHQRFMDSIPKAYQNSYEQIVNYCYDQFQNGDESTK 188
Query: 202 YAAARAWTKWE 212
A+AW WE
Sbjct: 189 EKLAKAWVDWE 199
>sp|P46541|PIP_BACCO Proline iminopeptidase OS=Bacillus coagulans GN=pip PE=1 SV=2
Length = 288
Score = 65.1 bits (157), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 62/126 (49%), Gaps = 8/126 (6%)
Query: 22 YSTGILKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGT-TPSNRRFFDPDFYRIILFDQR 80
Y+ G + V+ + + N G PV+ LHGGPG + + D +IL+DQ
Sbjct: 2 YTEGFIDVTGGRVSFQKFDENGGGTPVIVLHGGPGSSCYSLLGLKALAKD-RPVILYDQL 60
Query: 81 GAGKSTPHACLDQNTTWDL---IDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDK 137
G GKS T W L ++++ ++RQ L + E + G SWG+TLA AY L P
Sbjct: 61 GCGKSDRPM---DTTLWRLDRFVEELAQIRQALNLDEVHILGHSWGTTLAAAYCLTKPSG 117
Query: 138 VTGLVL 143
V ++
Sbjct: 118 VKSVIF 123
>sp|P52278|PIP_LACHE Proline iminopeptidase OS=Lactobacillus helveticus GN=pip PE=1 SV=1
Length = 294
Score = 60.5 bits (145), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 60/115 (52%), Gaps = 21/115 (18%)
Query: 35 IYWEQSGNPTGHPVVFLHGGPGGGTTPSNRRFFD-------PDFYRIILFDQRGAGKST- 86
I E+S P P+V LHGGPG S+ +F+ D RII++DQ G G+S+
Sbjct: 19 IVGERSEKP---PLVLLHGGPG-----SSHNYFEVLDELAQKDGRRIIMYDQLGCGESSI 70
Query: 87 --PHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSL-AHPDKV 138
H L TW + ++E LR+HL + + + G SWG LA+ Y HP+ +
Sbjct: 71 PDDHPELYTKETW--VKELEALREHLALRKMHLLGQSWGGMLAIIYMCDYHPEGI 123
>sp|A8YWL3|PIP_LACH4 Proline iminopeptidase OS=Lactobacillus helveticus (strain DPC
4571) GN=pip PE=3 SV=1
Length = 294
Score = 60.5 bits (145), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 60/115 (52%), Gaps = 21/115 (18%)
Query: 35 IYWEQSGNPTGHPVVFLHGGPGGGTTPSNRRFFD-------PDFYRIILFDQRGAGKST- 86
I E+S P P+V LHGGPG S+ +F+ D RII++DQ G G+S+
Sbjct: 19 IVGERSEKP---PLVLLHGGPG-----SSHNYFEVLDELAQKDGRRIIMYDQLGCGESSI 70
Query: 87 --PHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSL-AHPDKV 138
H L TW + ++E LR+HL + + + G SWG LA+ Y HP+ +
Sbjct: 71 PDDHPELYTKETW--VKELEALREHLALRKMHLLGQSWGGMLAIIYMCDYHPEGI 123
>sp|D5H0J3|PIP_LACCS Proline iminopeptidase OS=Lactobacillus crispatus (strain ST1)
GN=pip PE=3 SV=1
Length = 293
Score = 58.2 bits (139), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 50/94 (53%), Gaps = 17/94 (18%)
Query: 47 PVVFLHGGPGGGTTPSNRRFFDP-------DFYRIILFDQRGAGKST---PHACLDQNTT 96
P+V LHGGPG S+ +F+ D RII++DQ G GKS+ H L T
Sbjct: 28 PLVLLHGGPG-----SSHNYFEVLDKLAEIDNRRIIMYDQLGCGKSSIPDDHPELYTKET 82
Query: 97 WDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAY 130
W + ++ LR+HL + + + G SWG LAL Y
Sbjct: 83 W--VKELMALREHLALRKIHLLGQSWGGMLALIY 114
>sp|Q5FMT1|PIP_LACAC Proline iminopeptidase OS=Lactobacillus acidophilus (strain ATCC
700396 / NCK56 / N2 / NCFM) GN=pip PE=3 SV=1
Length = 293
Score = 56.6 bits (135), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 53/103 (51%), Gaps = 18/103 (17%)
Query: 47 PVVFLHGGPGGGTTPSNRRFFDP-------DFYRIILFDQRGAGKST---PHACLDQNTT 96
P+V LHGGPG S +F+ D RII++DQ G G S+ H L T
Sbjct: 28 PLVLLHGGPG-----STHNYFEVLDKLAKIDDRRIIMYDQLGCGNSSIPDDHPELYTKET 82
Query: 97 WDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSL-AHPDKV 138
W + +++ LR+HL + + + G SWG LA+ Y HP+ +
Sbjct: 83 W--VKELKTLREHLALRKIHLLGQSWGGMLAIIYMCDYHPEGI 123
>sp|P07383|TPES_PSEPU Tropinesterase OS=Pseudomonas putida PE=1 SV=1
Length = 272
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 60/134 (44%), Gaps = 4/134 (2%)
Query: 27 LKVSDIHTIYWEQSGNPTGHPVVFLHGGPGGGTTPSNRRFFDPDFYRIILFDQRG-AGKS 85
++++D + + + GNP+G PV+ LHG S+ F R + D RG G S
Sbjct: 18 IQINDAIKMRYVEWGNPSGDPVLLLHGYTDTSRAFSSLAPFLSKDKRYLALDLRGHGGTS 77
Query: 86 TPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRG 145
P C + D +D+ + + V G S GS A + HPDKV+ LVL
Sbjct: 78 IPKCCYYVS---DFAEDVSDFIDKMGLHNTTVIGHSMGSMTAGVLASIHPDKVSRLVLIS 134
Query: 146 IFLLRKKEIDWFYE 159
L ++W Y+
Sbjct: 135 TALKTGPVLEWVYD 148
>sp|C0ZKI1|PIP_BREBN Proline iminopeptidase OS=Brevibacillus brevis (strain 47 / JCM
6285 / NBRC 100599) GN=pip PE=3 SV=1
Length = 292
Score = 55.1 bits (131), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 55/111 (49%), Gaps = 2/111 (1%)
Query: 35 IYWEQSGNPTGHPVVFLHGGPGGGTTPSNRRF-FDPDFYRIILFDQRGAGKSTPHACLDQ 93
+++ + G P++ LHGGPG P D +I +DQ G+G S L
Sbjct: 15 VWYSRVGEGEKTPLIVLHGGPGNTHDPLKSTLHVLGDDRPVIFYDQLGSGNSDRPTDLTL 74
Query: 94 NTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSL-AHPDKVTGLVL 143
T ++++ +RQ L++ E + G SWG+ LA AY + A P+ V ++
Sbjct: 75 WKTERFVEELACIRQALDLKEVHILGHSWGTMLAAAYLVDAKPEGVQSIIF 125
>sp|A5I3F5|PIP_CLOBH Proline iminopeptidase OS=Clostridium botulinum (strain Hall / ATCC
3502 / NCTC 13319 / Type A) GN=pip PE=3 SV=1
Length = 293
Score = 54.3 bits (129), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 59/120 (49%), Gaps = 14/120 (11%)
Query: 33 HTIYWEQSGNPTGH--PVVFLHGGPGGGTTPSNRRFFD------PDFYRIILFDQRGAGK 84
+ Y+ G TG+ P+V LHGGPG S +F+ D +I++DQ G G
Sbjct: 13 YKTYYRIVGECTGNKKPLVLLHGGPG-----STHNYFEVLDKVAEDGRAVIMYDQLGCGL 67
Query: 85 STPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAH-PDKVTGLVL 143
S + D I+++ +LR+HL + E + G SWG A+ Y+ + P+ + +L
Sbjct: 68 SATPSRPDLWNAKTWIEELIQLRKHLGLDEIHLLGQSWGGMQAIQYACEYKPEGIKSYIL 127
>sp|B0SW62|RUTD_CAUSK Putative aminoacrylate hydrolase RutD OS=Caulobacter sp. (strain
K31) GN=rutD PE=3 SV=1
Length = 268
Score = 53.9 bits (128), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 56/124 (45%), Gaps = 13/124 (10%)
Query: 27 LKVSDIHTIYWEQSGNPTG-HPVVFLHGGPGGGTTPSNRRFFDPDF------YRIILFDQ 79
++ + +Y E G P V L G GG T F+ P +R++L+D
Sbjct: 1 MQSGTVDGLYHEVHGGPASDRQTVILSAGLGGSGT-----FWAPQMQALMSRFRVVLYDH 55
Query: 80 RGAGKSTPHACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVT 139
RG G+S D +T + DDI KL L + V G + G LA +L HPD++
Sbjct: 56 RGTGRSA-RTLTDPHTVAAMGDDIVKLMDALGLERAHVVGHAAGGNAGLALALNHPDRLD 114
Query: 140 GLVL 143
LV+
Sbjct: 115 KLVV 118
>sp|O06420|BPOC_MYCTU Putative non-heme bromoperoxidase BpoC OS=Mycobacterium
tuberculosis GN=bpoC PE=1 SV=1
Length = 262
Score = 52.4 bits (124), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 76/162 (46%), Gaps = 17/162 (10%)
Query: 42 NPTGHPVVFLHGGPGGGTT--PSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDL 99
N TG PVVF+ G G G T P F YR I FD RG G +T +A + TT +
Sbjct: 9 NGTGDPVVFIAGRGGAGRTWHPHQVPAFLAAGYRCITFDNRGIG-ATENA--EGFTTQTM 65
Query: 100 IDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVL---RGIFLLRKKEIDW 156
+ D L + L+I +V G S G+ +A + P+ V+ VL RG R
Sbjct: 66 VADTAALIETLDIAPARVVGVSMGAFIAQELMVVAPELVSSAVLMATRG----RLDRARQ 121
Query: 157 FYEGGAAAIYPDAWESFRDLIPE-NERSCFVDAYSKRLNSDD 197
F+ A +Y +S L P + R+ ++ +S++ +DD
Sbjct: 122 FFNKAEAELY----DSGVQLPPTYDARARLLENFSRKTLNDD 159
>sp|Q890D8|PIP_LACPL Proline iminopeptidase OS=Lactobacillus plantarum (strain ATCC
BAA-793 / NCIMB 8826 / WCFS1) GN=pip PE=3 SV=2
Length = 287
Score = 51.6 bits (122), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 55/105 (52%), Gaps = 13/105 (12%)
Query: 47 PVVFLHGGPGGGTTPSNRRFFDPDFYR----IILFDQRGAGKSTPHACLDQNTTWDL--- 99
P+V LHGGPG +T + FD + I+++DQ G G+S+ D + W
Sbjct: 22 PLVLLHGGPG--STHNYFEGFDDLAAQTGRPIVMYDQLGCGRSS---IPDDDQLWQAAMW 76
Query: 100 IDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAH-PDKVTGLVL 143
+ ++ LR +L++PE + G SWG LA+ Y + P + L+L
Sbjct: 77 VAELRALRTYLDLPEIHLLGQSWGGMLAIIYGCDYRPQGIKSLIL 121
>sp|Q13QH4|MHPC_BURXL 2-hydroxy-6-oxononadienedioate/2-hydroxy-6-oxononatrienedioate
hydrolase OS=Burkholderia xenovorans (strain LB400)
GN=mhpC PE=3 SV=1
Length = 289
Score = 50.8 bits (120), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 51/102 (50%), Gaps = 5/102 (4%)
Query: 48 VVFLHG-GPGGGTTPSNRRFFDPDF---YRIILFDQRGAGKSTPHACLDQNTTWDLIDDI 103
VV LHG GPG + R +P YR+IL D G KS P C D + + +
Sbjct: 40 VVMLHGSGPGASGWANFNRNVEPLVAAGYRVILLDCLGWSKSDPVVC-DGSRSELNARSL 98
Query: 104 EKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRG 145
+ L L+I + G S G A+A++LA+P +V LVL G
Sbjct: 99 KGLLDALDIERVHIIGNSMGGHSAVAFALANPQRVGKLVLMG 140
>sp|A4W922|RUTD_ENT38 Putative aminoacrylate hydrolase RutD OS=Enterobacter sp. (strain
638) GN=rutD PE=3 SV=1
Length = 270
Score = 50.8 bits (120), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 68/156 (43%), Gaps = 40/156 (25%)
Query: 47 PVVFLHGGPGGGTTPSNRRFFDPDF------YRIILFDQRGAGKST---PHACLDQNTTW 97
PVV L G GG + ++ P Y+++ +DQRG G + PH T
Sbjct: 14 PVVVLIAGLGGSGS-----YWLPQLAALEQEYQVVCYDQRGTGNNAGELPHG----YTLG 64
Query: 98 DLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVL-----------RGI 146
++ D++ + + IP + V G + G+ + L ++AHPD V LV R
Sbjct: 65 NMADELYQALLNAGIPRFTVIGHALGALVGLQLAIAHPDAVRALVCVNGWLSLNAHTRRC 124
Query: 147 FLLRKKEIDWFYEGGAAA--------IYPDAWESFR 174
F +R++ + GGA A +YP W + R
Sbjct: 125 FQIRER---LLHAGGAQAWVEAQPLFLYPADWMAAR 157
>sp|Q184M8|PIP_CLOD6 Proline iminopeptidase OS=Clostridium difficile (strain 630) GN=pip
PE=3 SV=1
Length = 293
Score = 50.8 bits (120), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 51/99 (51%), Gaps = 15/99 (15%)
Query: 47 PVVFLHGGPGGGTTPSNRRFFD------PDFYRIILFDQRGAGKS--TPHACLDQNTTWD 98
P+V LHGGPG S +F+ ++I++DQ G G S H L TW
Sbjct: 29 PLVLLHGGPG-----STHNYFEVLDKIAESGRQVIMYDQIGCGNSFVEGHPELFNADTW- 82
Query: 99 LIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDK 137
I+++ +LR+HL + E + G SWG A+ Y++ + K
Sbjct: 83 -IEELIELRKHLGLDEIHLLGQSWGGMQAIWYAIEYKPK 120
>sp|B7KWT4|RUTD_METC4 Putative aminoacrylate hydrolase RutD OS=Methylobacterium
chloromethanicum (strain CM4 / NCIMB 13688) GN=rutD PE=3
SV=1
Length = 260
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 83/222 (37%), Gaps = 36/222 (16%)
Query: 35 IYWEQSGNPTGHPVVFLHGGPGGGTTPSNRRFFDPDF------YRIILFDQRGAGKSTPH 88
++ E G P G V L G GG + +F P +R++ +D RG G+S P
Sbjct: 5 VHHEVHG-PAGGRTVLLSPGLGG-----SAHYFAPQVPVLAERFRVVTYDHRGTGRS-PS 57
Query: 89 ACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVL----- 143
+ + D+ L HL I + G + G +AL +L HP++V +V+
Sbjct: 58 PLEPGHDIAAMARDVLALLDHLGIGTADIVGHALGGLIALQLALTHPERVGRIVVINGWA 117
Query: 144 ------RGIF-----LLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKR 192
R F LLR + F A +YP W S EN D
Sbjct: 118 AMDPATRRCFAARKALLRHAGPEAFVRAQAIFLYPAPWLS------ENAARVAADEAQAL 171
Query: 193 LNSDDKETQYAAARAWTKWEMMTA-HLLPNEENIKRGEDDIF 233
+ T A A ++ A +P+E + DD+
Sbjct: 172 AHFPGTRTALARITALETFDATAALGRIPHETLLMAARDDVL 213
>sp|P46544|PIP_LACDE Proline iminopeptidase OS=Lactobacillus delbrueckii subsp.
bulgaricus GN=pepIP PE=1 SV=2
Length = 295
Score = 50.1 bits (118), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 75/168 (44%), Gaps = 23/168 (13%)
Query: 47 PVVFLHGGPGGGTTPSNRRFFD-------PDFYRIILFDQRGAGKST--PHACLDQNTTW 97
P++ LHGGPG S+ +F+ ++I++DQ G G S+ T
Sbjct: 29 PLLLLHGGPG-----SSHNYFEVLDQVAEKSGRQVIMYDQLGCGNSSIPDDQAETAYTAQ 83
Query: 98 DLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAH-PDKVTGLVLRGIFLLRK----- 151
+ ++E +R+ L + + + G SWG LAL Y + P+ V L+L K
Sbjct: 84 TWVKELENVREQLGLDQIHLLGQSWGGMLALIYLCDYQPEGVKSLILSSTLASAKLWSQE 143
Query: 152 --KEIDWFYEGGAAAIY-PDAWESFRDLIPENERSCFVDAYSKRLNSD 196
+ I + +G AAI + ++ L + + F+D ++ +L D
Sbjct: 144 LHRLIKYLPKGEQAAIKEAETTGNYDSLAYQAANAHFMDQHAIKLTPD 191
>sp|Q1G8L9|PIP_LACDA Proline iminopeptidase OS=Lactobacillus delbrueckii subsp.
bulgaricus (strain ATCC 11842 / DSM 20081) GN=pepIP PE=3
SV=1
Length = 295
Score = 50.1 bits (118), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 75/168 (44%), Gaps = 23/168 (13%)
Query: 47 PVVFLHGGPGGGTTPSNRRFFD-------PDFYRIILFDQRGAGKST--PHACLDQNTTW 97
P++ LHGGPG S+ +F+ ++I++DQ G G S+ T
Sbjct: 29 PLLLLHGGPG-----SSHNYFEVLDQVAEKSGRQVIMYDQLGCGNSSIPDDQAETAYTAQ 83
Query: 98 DLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAH-PDKVTGLVLRGIFLLRK----- 151
+ ++E +R+ L + + + G SWG LAL Y + P+ V L+L K
Sbjct: 84 TWVKELENVREQLGLDQIHLLGQSWGGMLALIYLCDYQPEGVKSLILSSTLASAKLWSQE 143
Query: 152 --KEIDWFYEGGAAAIY-PDAWESFRDLIPENERSCFVDAYSKRLNSD 196
+ I + +G AAI + ++ L + + F+D ++ +L D
Sbjct: 144 LHRLIKYLPKGEQAAIKEAETTGNYDSLAYQAANAHFMDQHAIKLTPD 191
>sp|C7CM33|RUTD_METED Putative aminoacrylate hydrolase RutD OS=Methylobacterium
extorquens (strain DSM 5838 / DM4) GN=rutD PE=3 SV=1
Length = 260
Score = 50.1 bits (118), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 85/222 (38%), Gaps = 36/222 (16%)
Query: 35 IYWEQSGNPTGHPVVFLHGGPGGGTTPSNRRFFDPDF------YRIILFDQRGAGKSTPH 88
++ E G P G V L G GG + +F P +R++ +D RG G+S P
Sbjct: 5 VHHEVHG-PAGGRTVLLSPGLGG-----SAHYFAPQVPVLAERFRVVTYDHRGTGRS-PG 57
Query: 89 ACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVL----- 143
+ + D+ L HL I + G + G +AL +L HP++V +V+
Sbjct: 58 PLEPGHDIAAMARDVLDLLDHLGIGTADIVGHALGGLIALQLALTHPERVGRIVVINGWA 117
Query: 144 ------RGIF-----LLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKR 192
R F LLR + F A +YP W S EN D
Sbjct: 118 VMDPATRRCFAARKALLRHAGPEAFVRAQAIFLYPAPWLS------ENAARVANDEAQAL 171
Query: 193 LNSDDKETQYAAARAWTKWEMMTA-HLLPNEENIKRGEDDIF 233
+ +ET A A ++ A +P+E + DD+
Sbjct: 172 AHFPGEETVLARISALEAFDGTAALARIPHETLLMAARDDVL 213
>sp|Q400K3|MHPC2_PSEPU 2-hydroxy-6-oxononadienedioate/2-hydroxy-6-oxononatrienedioate
hydrolase 2 OS=Pseudomonas putida GN=mhpC2 PE=3 SV=1
Length = 286
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 50/102 (49%), Gaps = 5/102 (4%)
Query: 48 VVFLHG-GPGGGTTPSNRRFFDPDF---YRIILFDQRGAGKSTPHACLDQNTTWDLIDDI 103
VV LHG GPG + R +P YR++L D G KS P C + + +
Sbjct: 37 VVMLHGSGPGASGWANFSRNLEPLLAAGYRVVLMDCPGWSKSDPIVCRSSRSDLN-ATAL 95
Query: 104 EKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRG 145
+ L L + + G S G+ A+A++LA+P +V LVL G
Sbjct: 96 KGLLDMLGLERVHILGNSMGAHSAVAFALANPRRVGKLVLMG 137
>sp|Q476M7|MHPC_CUPPJ 2-hydroxy-6-oxononadienedioate/2-hydroxy-6-oxononatrienedioate
hydrolase OS=Cupriavidus pinatubonensis (strain JMP134 /
LMG 1197) GN=mhpC PE=3 SV=1
Length = 289
Score = 47.4 bits (111), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 67/143 (46%), Gaps = 11/143 (7%)
Query: 11 LNTNLYPYVEPYSTGILKVSDIHT---IYWEQSGNPTGHPVVFLHG-GPGGGTTPSNRRF 66
+ N+ E ++ + V D T I+ +G VV LHG GPG + R
Sbjct: 1 MQANVQAITEAGTSRFVTVKDGDTEFRIHCNDTG-AGAETVVMLHGSGPGATGWANFNRN 59
Query: 67 FDPDF---YRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEK-LRQHLEIPEWQVFGGSW 122
+P YR++L D G GKS P ++ + +L + K + L+I + G S
Sbjct: 60 VEPLVAAGYRVLLVDCPGWGKSDP--VVNAGSRSELNGRVLKGVLDELDIERVHILGNSM 117
Query: 123 GSTLALAYSLAHPDKVTGLVLRG 145
G A+A++LA+P +V LVL G
Sbjct: 118 GGHSAVAFALANPQRVGKLVLMG 140
>sp|A1JMX1|RUTD_YERE8 Putative aminoacrylate hydrolase RutD OS=Yersinia enterocolitica
serotype O:8 / biotype 1B (strain 8081) GN=rutD PE=3
SV=1
Length = 278
Score = 47.4 bits (111), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 68/173 (39%), Gaps = 35/173 (20%)
Query: 35 IYWEQSG-NPTGHPVVFLHGGPGGGTTPSNRRFFDPDF------YRIILFDQRGAGKSTP 87
+Y+E +G N V L G GG + RF+ P +R+I +DQ G G+S
Sbjct: 1 MYFEITGQNSPAAKTVVLSAGLGG-----SGRFWQPQLSALGQHFRVITYDQYGTGRSAG 55
Query: 88 HACLDQNTTWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLV----- 142
T D+ D++ L I + G + G + L +L+HP V LV
Sbjct: 56 -VIPSGYTLADMADELADLLASQHIERYHFVGHALGGMIGLQLALSHPQCVERLVAINSW 114
Query: 143 ------LRGIFLLRKKEIDWFYEGGAAA--------IYPDAWESFRDLIPENE 181
R F +R+ D G AA +YP W S L+ E E
Sbjct: 115 PVLDSQTRRCFHVRQ---DLLLNSGVAAYVRAQPLFLYPADWLSRNTLLLEQE 164
>sp|P19076|DMPD_PSEUF 2-hydroxymuconate semialdehyde hydrolase OS=Pseudomonas sp. (strain
CF600) GN=dmpD PE=3 SV=1
Length = 283
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 51/106 (48%), Gaps = 6/106 (5%)
Query: 44 TGHPVVFLHGGPGGGTTPSNRRFFDPDFY---RIILFDQRGAGKSTPHACLDQNT-TWDL 99
G P++ +HG G T +N R P+ R+I D G G S A N W
Sbjct: 28 AGFPLMMIHGSGPGVTAWANWRLVMPELAKSRRVIAPDMLGFGYSERPADAQYNRDVW-- 85
Query: 100 IDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRG 145
+D + LEI + + G S+G +ALA ++ HP++V LVL G
Sbjct: 86 VDHAVGVLDALEIEQADLVGNSFGGGIALALAIRHPERVRRLVLMG 131
>sp|Q47GC1|MHPC2_DECAR 2-hydroxy-6-oxononadienedioate/2-hydroxy-6-oxononatrienedioate
hydrolase 2 OS=Dechloromonas aromatica (strain RCB)
GN=mhpC2 PE=3 SV=2
Length = 296
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 50/102 (49%), Gaps = 5/102 (4%)
Query: 48 VVFLHG-GPGGGTTPSNRRFFDPDF---YRIILFDQRGAGKSTPHACLDQNTTWDLIDDI 103
VV LHG GPG + R +P YR++L D G KS P C + + +
Sbjct: 42 VVMLHGSGPGASGWANFNRNVEPLVAAGYRVVLMDCPGWSKSDPIVCSGSRSELN-ASAL 100
Query: 104 EKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRG 145
+ L + + + + G S G A+A++LA+P +V L+L G
Sbjct: 101 KGLLDAIGLDKVHIIGNSMGGHSAVAFALANPSRVGKLILMG 142
>sp|Q03NE0|PIP_LACBA Proline iminopeptidase OS=Lactobacillus brevis (strain ATCC 367 /
JCM 1170) GN=pip PE=3 SV=1
Length = 299
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 14/92 (15%)
Query: 47 PVVFLHGGPGGGTTPSNRRFFDPDFYR----IILFDQRGAGKST----PHACLDQNTTWD 98
P++ LHGGPG +T + FD I+++DQ G G+S+ PH L Q TW
Sbjct: 29 PLLLLHGGPG--STHNYFEAFDQLAMATGRPIVMYDQLGCGRSSIPTDPH--LWQAATW- 83
Query: 99 LIDDIEKLRQHLEIPEWQVFGGSWGSTLALAY 130
+ ++ LR +L++ + G SWG LAL Y
Sbjct: 84 -VAELRALRAYLKLDCVHLLGQSWGGMLALIY 114
>sp|P46542|PIP_LACDL Proline iminopeptidase OS=Lactobacillus delbrueckii subsp. lactis
GN=pip PE=1 SV=1
Length = 294
Score = 46.6 bits (109), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 60/136 (44%), Gaps = 22/136 (16%)
Query: 47 PVVFLHGGPGGGTTPSNRRFFD-------PDFYRIILFDQRGAGKST--PHACLDQNTTW 97
P++ LHGGPG S+ +F+ ++I++DQ G G S+ T
Sbjct: 28 PLLLLHGGPG-----SSHNYFEVLDQVAEKSGRQVIMYDQLGCGNSSIPDDQAETAYTAQ 82
Query: 98 DLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAH-PDKVTGLVLRGIFLLRK----- 151
+ ++E +R+ L + + + G SWG LAL Y + P V L+L K
Sbjct: 83 TWVKELENVREQLGLDQIHLLGQSWGGMLALIYLCDYQPKGVKSLILSSTLASAKLWSQE 142
Query: 152 --KEIDWFYEGGAAAI 165
+ I + +G AAI
Sbjct: 143 LHRLIKYLPKGEQAAI 158
>sp|B1ZB18|RUTD_METPB Putative aminoacrylate hydrolase RutD OS=Methylobacterium populi
(strain ATCC BAA-705 / NCIMB 13946 / BJ001) GN=rutD PE=3
SV=1
Length = 260
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 80/215 (37%), Gaps = 35/215 (16%)
Query: 42 NPTGHPVVFLHGGPGGGTTPSNRRFFDPDF------YRIILFDQRGAGKSTPHACLDQNT 95
P G V L G GG + +F P +R++ +D RG G+S P +
Sbjct: 11 GPEGARTVLLSPGLGG-----SAHYFAPQVPALAERFRVVTYDHRGTGRS-PGPLEPGHD 64
Query: 96 TWDLIDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVL-----------R 144
+ D+ L HL I + G + G +AL +L HP++V +V+ R
Sbjct: 65 IAAMARDVLALLDHLGIGTTDIVGHALGGLIALHLALTHPERVERIVVINGWAVMDPATR 124
Query: 145 GIFLLRKKEI-----DWFYEGGAAAIYPDAWESFRDLIPENERSCFVDAYSKRLNSDDKE 199
F RK + + F A +YP W S EN D + +
Sbjct: 125 RCFSARKALLTQAGPEAFVRAQAIFLYPAPWLS------ENAARVADDEAQALAHFPGAK 178
Query: 200 TQYAAARAWTKWEMMTA-HLLPNEENIKRGEDDIF 233
T A A ++ A +P+E + DD+
Sbjct: 179 TVLARIAALEAFDATAALARIPHETLLMAARDDVL 213
>sp|C7PDD8|PIP_CHIPD Proline iminopeptidase OS=Chitinophaga pinensis (strain ATCC 43595
/ DSM 2588 / NCIB 11800 / UQM 2034) GN=Cpin_0261 PE=3
SV=2
Length = 299
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/156 (20%), Positives = 69/156 (44%), Gaps = 4/156 (2%)
Query: 32 IHTIYWEQSGNPTGHPVVFLHGGPG--GGTTPSNRRFFDPDFYRIILFDQRGAGKSTPHA 89
+ ++ ++ GN V+ L GGPG + +F + +D+ G G S
Sbjct: 10 VFNVWTKRIGNNPKVKVLLLAGGPGFPHDYLEAFESYFPGEGIEFYYYDELGNGNSDKPG 69
Query: 90 CLDQNTTWDLIDDIEKLRQHLEI--PEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIF 147
+ +D++E++RQ L++ + +FG SWG L + Y++ + + + L++ +
Sbjct: 70 DSSRYNVASAVDEVEQVRQALKLDSSNFYLFGHSWGGALGMEYAIKYQNNLKALIVSNMV 129
Query: 148 LLRKKEIDWFYEGGAAAIYPDAWESFRDLIPENERS 183
K+ + + + P ++ DL N+ S
Sbjct: 130 ASGKEFNRYVQQVLVKQLPPAILDTINDLSARNDYS 165
>sp|Q47HL4|MHPC1_DECAR 2-hydroxy-6-oxononadienedioate/2-hydroxy-6-oxononatrienedioate
hydrolase 1 OS=Dechloromonas aromatica (strain RCB)
GN=mhpC1 PE=3 SV=1
Length = 289
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 50/102 (49%), Gaps = 5/102 (4%)
Query: 48 VVFLHG-GPGGGTTPSNRRFFDPDF---YRIILFDQRGAGKSTPHACLDQNTTWDLIDDI 103
VV LHG GPG + R +P YR++L D G KS P C + + +
Sbjct: 40 VVMLHGSGPGASGWANFNRNVEPLVAAGYRVVLMDCPGWSKSDPIVCSGSRSELN-ARAL 98
Query: 104 EKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRG 145
+ L + + + + G S G A+A++LA+P +V L+L G
Sbjct: 99 KGLLDAIGLDKVHIIGNSMGGHSAVAFALANPSRVGKLILMG 140
>sp|P23133|TODF_PSEP1 2-hydroxy-6-oxo-2,4-heptadienoate hydrolase OS=Pseudomonas putida
(strain F1 / ATCC 700007) GN=todF PE=3 SV=2
Length = 276
Score = 45.8 bits (107), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 71/167 (42%), Gaps = 17/167 (10%)
Query: 44 TGHPVVFLHGGPGGGTTPSNRRFFDPDF---YRIILFDQRGAG-KSTPHACLDQNTTWDL 99
G+PVV +HG G T +N R P+ R+I D G G PH +W
Sbjct: 26 AGNPVVLVHGSGPGVTAWANWRTVMPELSRHRRVIAPDMVGFGFTQRPHGIHYGVESW-- 83
Query: 100 IDDIEKLRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYE 159
+ + + LE+ + G S+G L+LA+++ P +V LVL G + + D
Sbjct: 84 VAHLAGILDALELDRVDLVGNSFGGALSLAFAIRFPHRVRRLVLMGAVGVSFELTDGL-- 141
Query: 160 GGAAAIYPDAWESFRDLIPENERSCFVDAYSKRLNSDD-KETQYAAA 205
DA + +P + AY + L SD+ E +Y A+
Sbjct: 142 --------DAVWGYEPSVPNMRKVMDYFAYDRSLVSDELAELRYKAS 180
>sp|P77044|MHPC_ECOLI 2-hydroxy-6-oxononadienedioate/2-hydroxy-6-oxononatrienedioate
hydrolase OS=Escherichia coli (strain K12) GN=mhpC PE=1
SV=4
Length = 288
Score = 45.4 bits (106), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 53/103 (51%), Gaps = 7/103 (6%)
Query: 48 VVFLHG-GPGGGTTPSNRRFFDPDF---YRIILFDQRGAGKSTPHACLDQNTTWDLIDDI 103
VV LHG GPG + R DP YR+IL D G GKS + ++ + DL I
Sbjct: 38 VVLLHGSGPGATGWANFSRNIDPLVEAGYRVILLDCPGWGKS--DSVVNSGSRSDLNARI 95
Query: 104 EK-LRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRG 145
K + L+I + + G S G ++A++L P++V LVL G
Sbjct: 96 LKSVVDQLDIAKIHLLGNSMGGHSSVAFTLKWPERVGKLVLMG 138
>sp|B1XBJ6|MHPC_ECODH 2-hydroxy-6-oxononadienedioate/2-hydroxy-6-oxononatrienedioate
hydrolase OS=Escherichia coli (strain K12 / DH10B)
GN=mhpC PE=3 SV=2
Length = 288
Score = 45.4 bits (106), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 53/103 (51%), Gaps = 7/103 (6%)
Query: 48 VVFLHG-GPGGGTTPSNRRFFDPDF---YRIILFDQRGAGKSTPHACLDQNTTWDLIDDI 103
VV LHG GPG + R DP YR+IL D G GKS + ++ + DL I
Sbjct: 38 VVLLHGSGPGATGWANFSRNIDPLVEAGYRVILLDCPGWGKS--DSVVNSGSRSDLNARI 95
Query: 104 EK-LRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRG 145
K + L+I + + G S G ++A++L P++V LVL G
Sbjct: 96 LKSVVDQLDIAKIHLLGNSMGGHSSVAFTLKWPERVGKLVLMG 138
>sp|O05420|PIP_FLAME Proline iminopeptidase OS=Flavobacterium meningosepticum GN=fpaP
PE=1 SV=1
Length = 298
Score = 45.4 bits (106), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 53/110 (48%), Gaps = 16/110 (14%)
Query: 48 VVFLHGGPGGG--TTPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNT---TWDL--- 99
V+ LHGGP FF + + +DQ G+ S DQ T W++
Sbjct: 26 VLLLHGGPAMTHEYMECFETFFQREGFEFYEYDQLGSYYS------DQPTDEKLWNIDRF 79
Query: 100 IDDIEKLRQ--HLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIF 147
+D++E++R+ H + + V G SWG LA+ Y+L + + GL++ +
Sbjct: 80 VDEVEQVRKAIHADKENFYVLGNSWGGILAMEYALKYQQNLKGLIVANMM 129
>sp|A5FIF5|PIP_FLAJ1 Proline iminopeptidase OS=Flavobacterium johnsoniae (strain ATCC
17061 / DSM 2064 / UW101) GN=fpaP PE=3 SV=2
Length = 297
Score = 45.4 bits (106), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 59/133 (44%), Gaps = 4/133 (3%)
Query: 48 VVFLHGGPGGG--TTPSNRRFFDPDFYRIILFDQRGAGKSTPHACLDQNTTWDLIDDIEK 105
V+ LHGGP FF + + +DQ G+ S T +D++E+
Sbjct: 26 VLLLHGGPAMTHEYMECFETFFQREGFEFYEYDQLGSYYSDQPKDSSLWTIDRFVDEVEQ 85
Query: 106 LRQHLEIPE--WQVFGGSWGSTLALAYSLAHPDKVTGLVLRGIFLLRKKEIDWFYEGGAA 163
+R+ + + + V G SWG LA+ Y+L + + GL++ + + + E A
Sbjct: 86 VRKAINADKDNFYVLGNSWGGILAMEYALKYQQNMKGLLVSNMMASAPEYGKYADEVLAK 145
Query: 164 AIYPDAWESFRDL 176
+ P+ + RDL
Sbjct: 146 QMKPEILKEIRDL 158
>sp|B6HZX5|MHPC_ECOSE 2-hydroxy-6-oxononadienedioate/2-hydroxy-6-oxononatrienedioate
hydrolase OS=Escherichia coli (strain SE11) GN=mhpC PE=3
SV=2
Length = 288
Score = 45.1 bits (105), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 53/103 (51%), Gaps = 7/103 (6%)
Query: 48 VVFLHG-GPGGGTTPSNRRFFDPDF---YRIILFDQRGAGKSTPHACLDQNTTWDLIDDI 103
VV LHG GPG + R DP YR+IL D G GKS + ++ + DL I
Sbjct: 38 VVLLHGSGPGATGWANFSRNIDPLVEAGYRVILLDCPGWGKS--DSIVNSGSRSDLNARI 95
Query: 104 EK-LRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRG 145
K + L+I + + G S G ++A++L P++V LVL G
Sbjct: 96 LKSVVDQLDIAKIHLLGNSMGGHSSVAFTLNWPERVGKLVLMG 138
>sp|B7N8Q6|MHPC_ECOLU 2-hydroxy-6-oxononadienedioate/2-hydroxy-6-oxononatrienedioate
hydrolase OS=Escherichia coli O17:K52:H18 (strain UMN026
/ ExPEC) GN=mhpC PE=3 SV=2
Length = 288
Score = 45.1 bits (105), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 53/103 (51%), Gaps = 7/103 (6%)
Query: 48 VVFLHG-GPGGGTTPSNRRFFDPDF---YRIILFDQRGAGKSTPHACLDQNTTWDLIDDI 103
VV LHG GPG + R DP YR+IL D G GKS + ++ + DL I
Sbjct: 38 VVLLHGSGPGATGWANFSRNIDPLVEAGYRVILLDCPGWGKS--DSIVNSGSRSDLNARI 95
Query: 104 EK-LRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRG 145
K + L+I + + G S G ++A++L P++V LVL G
Sbjct: 96 LKSVVDQLDIAKIHLLGNSMGGHSSVAFTLNWPERVGKLVLMG 138
>sp|A7ZWZ6|MHPC_ECOHS 2-hydroxy-6-oxononadienedioate/2-hydroxy-6-oxononatrienedioate
hydrolase OS=Escherichia coli O9:H4 (strain HS) GN=mhpC
PE=3 SV=2
Length = 288
Score = 45.1 bits (105), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 53/103 (51%), Gaps = 7/103 (6%)
Query: 48 VVFLHG-GPGGGTTPSNRRFFDPDF---YRIILFDQRGAGKSTPHACLDQNTTWDLIDDI 103
VV LHG GPG + R DP YR+IL D G GKS + ++ + DL I
Sbjct: 38 VVLLHGSGPGATGWANFSRNIDPLVEAGYRVILLDCPGWGKS--DSIVNSGSRSDLNARI 95
Query: 104 EK-LRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRG 145
K + L+I + + G S G ++A++L P++V LVL G
Sbjct: 96 LKSVVDQLDIAKIHLLGNSMGGHSSVAFTLNWPERVGKLVLMG 138
>sp|B7M2Z7|MHPC_ECO8A 2-hydroxy-6-oxononadienedioate/2-hydroxy-6-oxononatrienedioate
hydrolase OS=Escherichia coli O8 (strain IAI1) GN=mhpC
PE=3 SV=2
Length = 288
Score = 45.1 bits (105), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 53/103 (51%), Gaps = 7/103 (6%)
Query: 48 VVFLHG-GPGGGTTPSNRRFFDPDF---YRIILFDQRGAGKSTPHACLDQNTTWDLIDDI 103
VV LHG GPG + R DP YR+IL D G GKS + ++ + DL I
Sbjct: 38 VVLLHGSGPGATGWANFSRNIDPLVEAGYRVILLDCPGWGKS--DSIVNSGSRSDLNARI 95
Query: 104 EK-LRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRG 145
K + L+I + + G S G ++A++L P++V LVL G
Sbjct: 96 LKSVVDQLDIAKIHLLGNSMGGHSSVAFTLNWPERVGKLVLMG 138
>sp|B7NK06|MHPC_ECO7I 2-hydroxy-6-oxononadienedioate/2-hydroxy-6-oxononatrienedioate
hydrolase OS=Escherichia coli O7:K1 (strain IAI39 /
ExPEC) GN=mhpC PE=3 SV=2
Length = 288
Score = 45.1 bits (105), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 53/103 (51%), Gaps = 7/103 (6%)
Query: 48 VVFLHG-GPGGGTTPSNRRFFDPDF---YRIILFDQRGAGKSTPHACLDQNTTWDLIDDI 103
VV LHG GPG + R DP YR+IL D G GKS + ++ + DL I
Sbjct: 38 VVLLHGSGPGATGWANFSRNIDPLVEAGYRVILLDCPGWGKS--DSIVNSGSRSDLNARI 95
Query: 104 EK-LRQHLEIPEWQVFGGSWGSTLALAYSLAHPDKVTGLVLRG 145
K + L+I + + G S G ++A++L P++V LVL G
Sbjct: 96 LKSVVDQLDIAKIHLLGNSMGGHSSVAFTLNWPERVGKLVLMG 138
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.138 0.440
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 107,674,542
Number of Sequences: 539616
Number of extensions: 5138477
Number of successful extensions: 9982
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 60
Number of HSP's successfully gapped in prelim test: 186
Number of HSP's that attempted gapping in prelim test: 9839
Number of HSP's gapped (non-prelim): 247
length of query: 237
length of database: 191,569,459
effective HSP length: 114
effective length of query: 123
effective length of database: 130,053,235
effective search space: 15996547905
effective search space used: 15996547905
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)