Query 026555
Match_columns 237
No_of_seqs 167 out of 1845
Neff 10.7
Searched_HMMs 46136
Date Fri Mar 29 09:32:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026555.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/026555hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1455 Lysophospholipase [Lip 100.0 7.1E-38 1.5E-42 235.1 22.6 230 8-237 24-254 (313)
2 PLN02385 hydrolase; alpha/beta 100.0 1.2E-32 2.5E-37 222.2 24.2 230 8-237 58-287 (349)
3 PLN02298 hydrolase, alpha/beta 100.0 3.4E-31 7.4E-36 212.3 25.2 229 9-237 30-259 (330)
4 COG2267 PldB Lysophospholipase 100.0 7.2E-31 1.6E-35 205.6 19.4 226 8-237 6-236 (298)
5 PHA02857 monoglyceride lipase; 100.0 3.3E-29 7.2E-34 196.1 23.2 214 14-237 3-217 (276)
6 PLN02652 hydrolase; alpha/beta 100.0 4.3E-28 9.3E-33 196.9 23.4 222 9-237 108-332 (395)
7 PRK10749 lysophospholipase L2; 100.0 1.3E-27 2.9E-32 191.3 23.6 220 12-237 31-267 (330)
8 TIGR01607 PST-A Plasmodium sub 100.0 9.3E-27 2E-31 186.1 20.0 216 16-237 2-278 (332)
9 TIGR02240 PHA_depoly_arom poly 99.9 3.6E-26 7.8E-31 178.9 15.0 123 16-149 6-128 (276)
10 PLN02824 hydrolase, alpha/beta 99.9 4.6E-26 9.9E-31 179.9 15.1 122 14-147 10-137 (294)
11 PRK00870 haloalkane dehalogena 99.9 4.5E-25 9.8E-30 174.8 18.4 115 22-146 34-149 (302)
12 PRK03592 haloalkane dehalogena 99.9 9.9E-25 2.1E-29 172.4 19.2 117 17-147 12-128 (295)
13 KOG4178 Soluble epoxide hydrol 99.9 5E-24 1.1E-28 163.0 16.7 128 11-148 21-149 (322)
14 PLN03087 BODYGUARD 1 domain co 99.9 4E-24 8.8E-29 176.2 17.0 127 16-149 180-311 (481)
15 PRK10673 acyl-CoA esterase; Pr 99.9 1.5E-23 3.2E-28 162.2 15.7 114 23-146 2-115 (255)
16 PLN02679 hydrolase, alpha/beta 99.9 2E-23 4.3E-28 169.0 15.3 125 16-148 65-192 (360)
17 PRK03204 haloalkane dehalogena 99.9 2.6E-23 5.6E-28 163.4 15.1 125 9-147 12-136 (286)
18 PLN03084 alpha/beta hydrolase 99.9 7.4E-23 1.6E-27 165.5 18.1 131 7-148 100-233 (383)
19 PRK06489 hypothetical protein; 99.9 7.4E-23 1.6E-27 165.8 17.8 133 9-147 34-189 (360)
20 PLN02965 Probable pheophorbida 99.9 1.6E-23 3.5E-28 162.1 12.8 103 38-147 4-107 (255)
21 TIGR03611 RutD pyrimidine util 99.9 2.9E-23 6.3E-28 160.1 13.6 117 24-149 1-117 (257)
22 PLN02578 hydrolase 99.9 9.5E-23 2.1E-27 164.8 15.4 120 15-148 69-188 (354)
23 TIGR03056 bchO_mg_che_rel puta 99.9 1.5E-22 3.2E-27 158.3 16.0 125 13-148 7-131 (278)
24 TIGR03343 biphenyl_bphD 2-hydr 99.9 8.4E-23 1.8E-27 160.2 14.1 122 14-147 9-136 (282)
25 PLN02511 hydrolase 99.9 4.3E-22 9.3E-27 162.3 17.8 140 7-149 67-212 (388)
26 TIGR01250 pro_imino_pep_2 prol 99.9 2.6E-22 5.7E-27 157.1 15.5 125 16-148 6-132 (288)
27 PRK11126 2-succinyl-6-hydroxy- 99.9 3.8E-23 8.2E-28 158.7 9.9 102 37-149 2-104 (242)
28 PRK10349 carboxylesterase BioH 99.9 4.7E-23 1E-27 159.6 10.4 98 38-149 14-111 (256)
29 PF12697 Abhydrolase_6: Alpha/ 99.9 1E-22 2.2E-27 153.8 11.2 103 40-150 1-104 (228)
30 TIGR03101 hydr2_PEP hydrolase, 99.9 1.1E-21 2.3E-26 150.8 15.5 131 15-150 4-137 (266)
31 TIGR02427 protocat_pcaD 3-oxoa 99.9 9.6E-23 2.1E-27 156.3 9.2 115 24-149 2-116 (251)
32 KOG4409 Predicted hydrolase/ac 99.9 2.2E-21 4.8E-26 149.1 16.2 136 9-150 63-198 (365)
33 PRK07581 hypothetical protein; 99.9 7E-22 1.5E-26 159.0 13.8 123 19-148 23-160 (339)
34 PRK10985 putative hydrolase; P 99.9 2E-21 4.4E-26 155.2 16.2 141 7-150 27-171 (324)
35 PRK13604 luxD acyl transferase 99.9 5.7E-21 1.2E-25 147.8 18.0 131 13-150 11-144 (307)
36 COG1647 Esterase/lipase [Gener 99.9 4.3E-21 9.3E-26 138.4 14.9 175 37-237 15-189 (243)
37 TIGR01392 homoserO_Ac_trn homo 99.9 5.8E-22 1.3E-26 160.1 11.9 126 18-149 12-164 (351)
38 TIGR03695 menH_SHCHC 2-succiny 99.9 1.6E-21 3.5E-26 149.2 11.8 105 37-149 1-107 (251)
39 PLN02211 methyl indole-3-aceta 99.9 3.9E-21 8.4E-26 149.9 12.4 118 19-147 4-122 (273)
40 PRK08775 homoserine O-acetyltr 99.9 2.4E-21 5.2E-26 156.0 10.4 116 19-148 43-174 (343)
41 PRK00175 metX homoserine O-ace 99.9 1.4E-20 3.1E-25 153.3 14.6 125 19-149 30-184 (379)
42 PRK05077 frsA fermentation/res 99.9 8.6E-20 1.9E-24 149.6 18.4 135 10-148 167-301 (414)
43 PLN02894 hydrolase, alpha/beta 99.8 3.6E-20 7.9E-25 151.7 15.8 117 23-149 93-213 (402)
44 PRK14875 acetoin dehydrogenase 99.8 5.6E-21 1.2E-25 155.6 10.5 120 17-148 114-233 (371)
45 TIGR01738 bioH putative pimelo 99.8 1.8E-20 3.9E-25 143.2 10.7 99 37-149 4-102 (245)
46 TIGR03100 hydr1_PEP hydrolase, 99.8 1.8E-18 3.9E-23 135.0 19.8 128 15-149 5-136 (274)
47 KOG1454 Predicted hydrolase/ac 99.8 8.8E-20 1.9E-24 144.6 10.0 109 35-150 56-169 (326)
48 TIGR01249 pro_imino_pep_1 prol 99.8 2.4E-19 5.3E-24 142.3 12.6 126 12-148 5-131 (306)
49 PLN02980 2-oxoglutarate decarb 99.8 2.3E-19 4.9E-24 167.5 14.0 106 36-149 1370-1482(1655)
50 PRK05855 short chain dehydroge 99.8 2.6E-18 5.6E-23 147.8 15.6 121 13-144 4-128 (582)
51 COG0429 Predicted hydrolase of 99.8 7.4E-18 1.6E-22 129.2 15.3 221 9-237 47-282 (345)
52 TIGR01836 PHA_synth_III_C poly 99.8 6.2E-18 1.3E-22 136.6 14.7 122 24-151 48-175 (350)
53 TIGR00976 /NonD putative hydro 99.8 2.5E-18 5.3E-23 146.4 12.7 132 17-151 2-136 (550)
54 KOG1552 Predicted alpha/beta h 99.8 5.9E-18 1.3E-22 125.6 11.4 131 10-150 34-166 (258)
55 PF12146 Hydrolase_4: Putative 99.8 3.8E-18 8.1E-23 106.7 7.8 79 21-101 1-79 (79)
56 KOG1838 Alpha/beta hydrolase [ 99.8 6.1E-17 1.3E-21 128.4 16.1 139 6-147 88-236 (409)
57 PRK10566 esterase; Provisional 99.7 2.6E-16 5.6E-21 121.3 13.8 108 35-144 25-139 (249)
58 KOG2564 Predicted acetyltransf 99.7 1.6E-16 3.6E-21 118.6 11.6 118 23-146 61-181 (343)
59 PRK06765 homoserine O-acetyltr 99.7 1.5E-16 3.2E-21 129.2 11.9 123 21-149 40-198 (389)
60 KOG2984 Predicted hydrolase [G 99.7 9.7E-18 2.1E-22 119.4 3.9 125 17-151 26-153 (277)
61 PLN02872 triacylglycerol lipas 99.7 1.5E-16 3.2E-21 129.3 9.3 141 7-151 40-201 (395)
62 KOG2382 Predicted alpha/beta h 99.7 2.6E-15 5.6E-20 115.5 13.8 122 22-148 36-160 (315)
63 TIGR03230 lipo_lipase lipoprot 99.7 1.5E-15 3.3E-20 123.6 13.3 113 36-149 40-156 (442)
64 cd00707 Pancreat_lipase_like P 99.7 7.9E-16 1.7E-20 119.8 10.3 114 36-150 35-150 (275)
65 TIGR01840 esterase_phb esteras 99.7 1.3E-15 2.9E-20 114.5 11.2 122 27-148 2-131 (212)
66 PLN00021 chlorophyllase 99.6 5.4E-15 1.2E-19 116.8 11.9 119 22-149 37-168 (313)
67 KOG4391 Predicted alpha/beta h 99.6 2.4E-15 5.3E-20 108.4 9.0 144 3-153 46-190 (300)
68 PF02129 Peptidase_S15: X-Pro 99.6 3.7E-15 8.1E-20 116.3 9.5 129 20-151 1-140 (272)
69 TIGR02821 fghA_ester_D S-formy 99.6 2.6E-14 5.6E-19 111.7 13.7 129 18-149 21-175 (275)
70 PRK11071 esterase YqiA; Provis 99.6 8.6E-15 1.9E-19 107.9 9.9 90 38-148 2-94 (190)
71 PF12695 Abhydrolase_5: Alpha/ 99.6 1.5E-14 3.2E-19 102.1 10.6 94 39-146 1-94 (145)
72 TIGR01838 PHA_synth_I poly(R)- 99.6 5.1E-14 1.1E-18 117.8 15.2 124 22-151 172-306 (532)
73 PF06342 DUF1057: Alpha/beta h 99.6 1.4E-13 3.1E-18 103.8 15.4 126 16-151 11-141 (297)
74 PRK07868 acyl-CoA synthetase; 99.6 1.8E-14 3.9E-19 130.5 12.1 121 23-150 48-180 (994)
75 KOG2931 Differentiation-relate 99.6 8E-14 1.7E-18 105.1 12.8 215 12-237 23-254 (326)
76 COG1506 DAP2 Dipeptidyl aminop 99.6 3.1E-14 6.8E-19 122.7 11.1 135 11-148 365-508 (620)
77 PLN02442 S-formylglutathione h 99.5 2E-13 4.3E-18 107.1 14.1 130 18-149 26-180 (283)
78 PF03096 Ndr: Ndr family; Int 99.5 3.8E-14 8.3E-19 108.0 9.1 212 15-237 3-227 (283)
79 PF06500 DUF1100: Alpha/beta h 99.5 1.1E-13 2.3E-18 110.9 11.8 133 11-148 165-297 (411)
80 PF05448 AXE1: Acetyl xylan es 99.5 3.2E-13 6.9E-18 106.9 13.9 139 7-148 52-210 (320)
81 TIGR03502 lipase_Pla1_cef extr 99.5 2.2E-13 4.7E-18 117.7 13.3 116 16-132 422-575 (792)
82 PF00561 Abhydrolase_1: alpha/ 99.5 6.7E-14 1.4E-18 106.1 7.8 75 66-146 1-78 (230)
83 COG0596 MhpC Predicted hydrola 99.5 9.7E-13 2.1E-17 100.9 12.6 115 20-148 8-124 (282)
84 KOG4667 Predicted esterase [Li 99.5 3.8E-12 8.3E-17 92.0 14.5 111 35-150 31-142 (269)
85 PRK11460 putative hydrolase; P 99.5 6.9E-13 1.5E-17 101.0 11.1 111 35-146 14-137 (232)
86 COG2021 MET2 Homoserine acetyl 99.4 2.8E-13 6E-18 105.9 7.2 125 20-150 34-185 (368)
87 COG3458 Acetyl esterase (deace 99.4 4E-12 8.6E-17 95.0 12.0 133 13-148 58-211 (321)
88 COG0412 Dienelactone hydrolase 99.4 2E-11 4.4E-16 92.8 14.7 129 17-147 7-146 (236)
89 PF12715 Abhydrolase_7: Abhydr 99.4 6.6E-12 1.4E-16 99.2 11.7 144 5-149 82-262 (390)
90 PRK10162 acetyl esterase; Prov 99.4 1.2E-11 2.7E-16 98.6 13.3 125 14-149 60-197 (318)
91 PF01738 DLH: Dienelactone hyd 99.4 6.5E-12 1.4E-16 94.9 10.3 119 25-145 2-130 (218)
92 COG4757 Predicted alpha/beta h 99.4 2.3E-12 5E-17 94.1 6.8 134 14-153 8-144 (281)
93 PF02273 Acyl_transf_2: Acyl t 99.3 1.9E-11 4.2E-16 90.1 11.5 129 14-149 5-136 (294)
94 COG2936 Predicted acyl esteras 99.3 5.7E-12 1.2E-16 104.4 9.8 138 11-151 19-163 (563)
95 PF10230 DUF2305: Uncharacteri 99.3 4E-11 8.6E-16 93.0 13.4 114 37-151 2-126 (266)
96 COG2945 Predicted hydrolase of 99.3 3.6E-11 7.8E-16 85.6 11.8 119 23-148 15-138 (210)
97 TIGR01839 PHA_synth_II poly(R) 99.3 4.2E-11 9.1E-16 99.8 13.7 123 23-151 200-332 (560)
98 PF12740 Chlorophyllase2: Chlo 99.3 4.4E-11 9.6E-16 90.6 11.2 115 26-149 6-133 (259)
99 PF07819 PGAP1: PGAP1-like pro 99.3 7.2E-11 1.6E-15 89.2 11.4 110 37-151 4-127 (225)
100 PF00975 Thioesterase: Thioest 99.3 6.9E-11 1.5E-15 89.9 11.0 101 38-147 1-104 (229)
101 KOG2624 Triglyceride lipase-ch 99.3 4.3E-11 9.3E-16 96.6 10.2 141 7-150 44-202 (403)
102 PRK10115 protease 2; Provision 99.3 8.3E-11 1.8E-15 102.5 12.4 143 9-151 414-563 (686)
103 PF10503 Esterase_phd: Esteras 99.2 1.3E-10 2.8E-15 86.9 10.4 125 24-148 1-133 (220)
104 PF08538 DUF1749: Protein of u 99.2 2E-09 4.4E-14 83.2 15.8 109 36-152 32-153 (303)
105 PF00326 Peptidase_S9: Prolyl 99.2 8.4E-11 1.8E-15 88.5 8.2 97 55-151 4-103 (213)
106 PF02230 Abhydrolase_2: Phosph 99.2 2.5E-10 5.4E-15 86.2 9.2 114 34-149 11-142 (216)
107 COG3208 GrsT Predicted thioest 99.1 7.9E-10 1.7E-14 82.1 9.8 103 35-146 5-111 (244)
108 PF07859 Abhydrolase_3: alpha/ 99.1 4.9E-10 1.1E-14 84.2 8.8 101 40-149 1-112 (211)
109 PF01674 Lipase_2: Lipase (cla 99.1 2E-10 4.3E-15 85.7 6.5 90 38-132 2-95 (219)
110 PF00151 Lipase: Lipase; Inte 99.1 2.7E-10 5.9E-15 90.6 6.7 116 35-151 69-191 (331)
111 PLN02733 phosphatidylcholine-s 99.1 1.4E-09 2.9E-14 89.6 10.9 93 53-151 109-205 (440)
112 PF07224 Chlorophyllase: Chlor 99.1 7E-10 1.5E-14 82.9 8.3 119 23-150 32-160 (307)
113 COG0400 Predicted esterase [Ge 99.1 8.2E-10 1.8E-14 81.7 8.7 115 35-151 16-138 (207)
114 PF05990 DUF900: Alpha/beta hy 99.1 2.3E-09 5.1E-14 81.4 10.9 113 35-149 16-139 (233)
115 COG3509 LpqC Poly(3-hydroxybut 99.1 2.6E-09 5.7E-14 81.3 11.0 129 17-147 40-179 (312)
116 KOG2565 Predicted hydrolases o 99.1 8.7E-10 1.9E-14 86.1 8.4 122 17-145 129-262 (469)
117 COG0657 Aes Esterase/lipase [L 99.0 6.8E-09 1.5E-13 82.8 13.3 124 20-151 60-195 (312)
118 PF06821 Ser_hydrolase: Serine 99.0 1.2E-09 2.5E-14 79.0 7.8 90 40-148 1-92 (171)
119 PF05677 DUF818: Chlamydia CHL 99.0 1.3E-08 2.8E-13 79.2 12.9 115 14-133 114-236 (365)
120 PF06028 DUF915: Alpha/beta hy 99.0 3.4E-09 7.3E-14 81.1 9.5 113 36-151 10-147 (255)
121 KOG1553 Predicted alpha/beta h 99.0 4.5E-09 9.8E-14 81.5 9.9 132 11-150 214-348 (517)
122 PRK05371 x-prolyl-dipeptidyl a 99.0 4.1E-09 8.9E-14 92.7 10.8 92 56-149 270-375 (767)
123 PF05728 UPF0227: Uncharacteri 99.0 6.7E-09 1.5E-13 75.9 9.6 90 40-150 2-94 (187)
124 COG4099 Predicted peptidase [G 99.0 2.2E-08 4.8E-13 76.2 12.5 128 16-148 166-305 (387)
125 PF06057 VirJ: Bacterial virul 99.0 7.1E-09 1.5E-13 74.7 9.3 103 39-150 4-110 (192)
126 TIGR01849 PHB_depoly_PhaZ poly 98.9 1E-08 2.2E-13 83.2 10.9 106 37-151 102-212 (406)
127 PF03403 PAF-AH_p_II: Platelet 98.9 8.9E-09 1.9E-13 83.7 9.6 113 35-149 98-264 (379)
128 PRK10252 entF enterobactin syn 98.9 8E-09 1.7E-13 97.0 10.1 100 37-146 1068-1170(1296)
129 COG3243 PhaC Poly(3-hydroxyalk 98.9 3.1E-08 6.8E-13 79.1 11.6 117 29-151 98-221 (445)
130 COG3319 Thioesterase domains o 98.9 2.4E-08 5.1E-13 76.3 9.5 101 38-148 1-104 (257)
131 KOG1515 Arylacetamide deacetyl 98.8 1.5E-07 3.3E-12 74.7 14.0 135 15-154 65-214 (336)
132 COG4782 Uncharacterized protei 98.8 6.3E-08 1.4E-12 76.0 10.5 114 35-150 114-237 (377)
133 PF00756 Esterase: Putative es 98.8 3.6E-08 7.8E-13 76.1 8.9 126 21-149 5-152 (251)
134 COG3571 Predicted hydrolase of 98.8 2.5E-07 5.4E-12 64.3 11.6 111 35-151 12-128 (213)
135 COG4188 Predicted dienelactone 98.8 5.7E-08 1.2E-12 76.7 9.2 112 21-133 49-180 (365)
136 PRK10439 enterobactin/ferric e 98.7 2.8E-07 6.2E-12 75.8 12.5 127 21-148 191-324 (411)
137 PTZ00472 serine carboxypeptida 98.7 6.6E-07 1.4E-11 74.8 14.7 137 12-150 48-219 (462)
138 PF09752 DUF2048: Uncharacteri 98.7 5.8E-07 1.3E-11 70.9 12.6 122 23-147 76-210 (348)
139 KOG4627 Kynurenine formamidase 98.7 1.6E-07 3.5E-12 67.9 7.9 117 23-150 55-175 (270)
140 PF05057 DUF676: Putative seri 98.6 1.9E-07 4.1E-12 70.4 8.4 94 35-131 2-97 (217)
141 KOG2281 Dipeptidyl aminopeptid 98.6 5.1E-07 1.1E-11 75.6 11.3 131 14-149 616-764 (867)
142 PF12048 DUF3530: Protein of u 98.6 4.5E-06 9.8E-11 66.2 15.8 130 16-149 66-231 (310)
143 COG3545 Predicted esterase of 98.6 5.3E-07 1.2E-11 63.7 9.2 94 38-149 3-96 (181)
144 PF05577 Peptidase_S28: Serine 98.6 1.1E-06 2.3E-11 73.4 12.7 116 36-151 28-152 (434)
145 COG1075 LipA Predicted acetylt 98.6 2.1E-07 4.6E-12 74.7 7.8 104 37-150 59-167 (336)
146 KOG2100 Dipeptidyl aminopeptid 98.6 9.6E-07 2.1E-11 77.9 11.9 132 19-150 505-647 (755)
147 KOG3975 Uncharacterized conser 98.5 3.4E-06 7.4E-11 63.0 12.5 126 17-147 6-147 (301)
148 COG4814 Uncharacterized protei 98.5 8.3E-07 1.8E-11 66.3 8.8 108 38-148 46-177 (288)
149 cd00312 Esterase_lipase Estera 98.5 7.9E-07 1.7E-11 75.5 9.4 124 23-149 78-215 (493)
150 PF02450 LCAT: Lecithin:choles 98.5 2.8E-06 6.2E-11 69.7 11.4 87 53-151 66-164 (389)
151 KOG3847 Phospholipase A2 (plat 98.4 1.5E-06 3.2E-11 67.0 8.6 112 35-148 116-276 (399)
152 PF11339 DUF3141: Protein of u 98.4 1.2E-05 2.6E-10 66.3 13.4 88 55-151 91-179 (581)
153 KOG3101 Esterase D [General fu 98.4 9.9E-07 2.1E-11 64.2 6.1 128 21-150 25-179 (283)
154 COG2272 PnbA Carboxylesterase 98.4 3.1E-06 6.6E-11 69.4 9.2 126 23-148 79-218 (491)
155 PRK04940 hypothetical protein; 98.3 5.4E-06 1.2E-10 59.7 8.3 95 40-151 2-96 (180)
156 PLN02633 palmitoyl protein thi 98.3 4.9E-05 1.1E-09 59.2 14.0 104 38-149 26-133 (314)
157 smart00824 PKS_TE Thioesterase 98.3 6.5E-06 1.4E-10 61.3 8.9 89 49-147 11-102 (212)
158 PF00135 COesterase: Carboxyle 98.3 2.8E-05 6.1E-10 66.6 13.4 125 23-149 108-247 (535)
159 COG3150 Predicted esterase [Ge 98.2 9.3E-06 2E-10 57.0 7.8 94 40-151 2-95 (191)
160 KOG2237 Predicted serine prote 98.2 3.3E-06 7.1E-11 70.9 6.2 143 10-152 440-589 (712)
161 PF10340 DUF2424: Protein of u 98.2 8.2E-05 1.8E-09 59.8 13.7 117 26-150 108-238 (374)
162 KOG3724 Negative regulator of 98.2 2.3E-05 5E-10 67.5 11.1 109 37-150 89-223 (973)
163 PF00450 Peptidase_S10: Serine 98.2 8.8E-05 1.9E-09 61.6 14.3 138 11-150 11-184 (415)
164 COG1505 Serine proteases of th 98.2 3.9E-06 8.4E-11 70.1 5.9 145 6-150 389-538 (648)
165 KOG3043 Predicted hydrolase re 98.2 1.1E-05 2.4E-10 59.4 7.6 104 38-144 40-151 (242)
166 PF11144 DUF2920: Protein of u 98.1 9.9E-05 2.1E-09 59.6 13.1 129 20-149 18-221 (403)
167 PLN02606 palmitoyl-protein thi 98.1 4.4E-05 9.5E-10 59.4 10.4 105 38-150 27-135 (306)
168 PF02089 Palm_thioest: Palmito 98.1 1.7E-05 3.7E-10 61.1 7.7 107 38-149 6-118 (279)
169 KOG2112 Lysophospholipase [Lip 98.1 2.6E-05 5.6E-10 56.9 8.2 110 37-148 3-129 (206)
170 COG1770 PtrB Protease II [Amin 98.1 2.8E-05 6E-10 65.9 9.1 136 18-153 426-568 (682)
171 COG3946 VirJ Type IV secretory 98.1 3.9E-05 8.4E-10 61.4 9.4 104 22-134 245-348 (456)
172 KOG2183 Prolylcarboxypeptidase 98.0 2.1E-05 4.6E-10 62.9 7.3 112 38-152 81-208 (492)
173 PF07082 DUF1350: Protein of u 98.0 0.0001 2.2E-09 55.6 10.4 103 35-147 15-125 (250)
174 KOG2541 Palmitoyl protein thio 98.0 0.00017 3.7E-09 54.7 11.4 104 38-149 24-130 (296)
175 KOG4840 Predicted hydrolases o 98.0 2.5E-05 5.4E-10 57.5 6.8 108 37-150 36-147 (299)
176 COG0627 Predicted esterase [Ge 97.9 7.7E-05 1.7E-09 59.1 8.8 113 35-150 52-190 (316)
177 PF03959 FSH1: Serine hydrolas 97.9 6.4E-05 1.4E-09 56.5 7.9 114 36-149 3-147 (212)
178 KOG3967 Uncharacterized conser 97.9 0.00052 1.1E-08 50.4 11.2 110 35-149 99-229 (297)
179 PF03583 LIP: Secretory lipase 97.7 0.00039 8.5E-09 54.8 10.0 89 56-150 17-116 (290)
180 cd00741 Lipase Lipase. Lipase 97.6 0.00014 3.1E-09 51.6 5.8 58 90-149 8-69 (153)
181 COG2819 Predicted hydrolase of 97.6 0.0024 5.2E-08 48.9 12.4 41 110-150 135-175 (264)
182 PLN02517 phosphatidylcholine-s 97.6 0.00017 3.6E-09 61.0 6.6 91 55-149 159-265 (642)
183 PF08840 BAAT_C: BAAT / Acyl-C 97.6 0.00011 2.5E-09 55.2 5.1 56 95-151 5-60 (213)
184 PLN03016 sinapoylglucose-malat 97.5 0.0033 7.2E-08 52.4 13.1 137 12-149 38-212 (433)
185 KOG2369 Lecithin:cholesterol a 97.5 0.00037 8E-09 57.1 6.8 87 53-147 125-225 (473)
186 PF04083 Abhydro_lipase: Parti 97.5 0.00034 7.3E-09 41.4 4.8 47 7-53 8-59 (63)
187 KOG2182 Hydrolytic enzymes of 97.4 0.0035 7.7E-08 51.8 11.2 115 37-151 86-211 (514)
188 PF06259 Abhydrolase_8: Alpha/ 97.4 0.02 4.3E-07 41.6 13.8 112 35-148 17-145 (177)
189 PLN02209 serine carboxypeptida 97.3 0.0062 1.3E-07 50.9 12.1 129 21-150 51-215 (437)
190 COG2382 Fes Enterochelin ester 97.1 0.0034 7.4E-08 48.8 8.3 112 35-150 96-215 (299)
191 cd00519 Lipase_3 Lipase (class 97.1 0.0019 4.2E-08 49.1 7.0 58 88-147 106-168 (229)
192 PF01083 Cutinase: Cutinase; 97.1 0.0037 8E-08 45.6 8.1 106 39-149 7-124 (179)
193 PF01764 Lipase_3: Lipase (cla 97.1 0.0015 3.3E-08 45.4 5.4 38 93-132 47-84 (140)
194 KOG1282 Serine carboxypeptidas 97.1 0.055 1.2E-06 45.2 15.0 139 9-152 42-218 (454)
195 PF11187 DUF2974: Protein of u 97.0 0.0026 5.6E-08 48.1 6.6 39 111-149 83-125 (224)
196 PF11288 DUF3089: Protein of u 96.7 0.003 6.5E-08 46.8 4.7 76 56-133 37-116 (207)
197 KOG2551 Phospholipase/carboxyh 96.6 0.024 5.1E-07 42.2 8.5 107 36-149 4-149 (230)
198 COG4553 DepA Poly-beta-hydroxy 96.6 0.019 4.1E-07 44.5 8.1 111 31-150 97-212 (415)
199 KOG1516 Carboxylesterase and r 96.5 0.018 4E-07 49.7 9.0 126 23-151 96-236 (545)
200 PF07519 Tannase: Tannase and 96.5 0.06 1.3E-06 45.6 11.5 130 17-150 8-153 (474)
201 PLN02162 triacylglycerol lipas 96.3 0.01 2.2E-07 49.2 5.9 22 110-131 276-297 (475)
202 PLN02310 triacylglycerol lipas 96.3 0.012 2.6E-07 48.2 6.0 40 91-132 190-229 (405)
203 PLN00413 triacylglycerol lipas 96.3 0.011 2.5E-07 49.0 5.8 22 110-131 282-303 (479)
204 PF06441 EHN: Epoxide hydrolas 96.2 0.018 3.9E-07 38.4 5.4 44 9-53 65-108 (112)
205 PF05576 Peptidase_S37: PS-10 96.1 0.027 5.8E-07 45.9 7.0 108 35-148 61-170 (448)
206 PLN02571 triacylglycerol lipas 96.0 0.0088 1.9E-07 49.0 4.2 21 112-132 226-246 (413)
207 PF05277 DUF726: Protein of un 96.0 0.023 4.9E-07 45.7 6.3 44 107-150 215-263 (345)
208 PLN02454 triacylglycerol lipas 96.0 0.013 2.8E-07 48.0 4.8 39 92-132 208-248 (414)
209 COG2939 Carboxypeptidase C (ca 96.0 0.11 2.5E-06 43.4 10.2 115 35-151 99-240 (498)
210 PF04301 DUF452: Protein of un 95.9 0.086 1.9E-06 39.4 8.5 81 37-149 11-92 (213)
211 PLN03037 lipase class 3 family 95.8 0.013 2.9E-07 49.1 4.2 40 91-132 299-338 (525)
212 PF05705 DUF829: Eukaryotic pr 95.7 0.13 2.7E-06 39.5 9.2 103 40-149 2-114 (240)
213 KOG4372 Predicted alpha/beta h 95.5 0.021 4.5E-07 46.3 4.3 87 35-130 78-168 (405)
214 PLN02408 phospholipase A1 95.5 0.024 5.2E-07 45.8 4.5 21 112-132 200-220 (365)
215 KOG1283 Serine carboxypeptidas 95.4 0.11 2.4E-06 41.0 7.8 136 14-151 6-170 (414)
216 PLN02934 triacylglycerol lipas 95.4 0.023 4.9E-07 47.7 4.4 34 96-131 307-340 (515)
217 KOG4388 Hormone-sensitive lipa 95.4 0.3 6.5E-06 41.8 10.6 114 25-149 384-510 (880)
218 KOG1551 Uncharacterized conser 95.2 0.051 1.1E-06 41.6 5.1 119 23-145 101-228 (371)
219 PLN02324 triacylglycerol lipas 95.0 0.039 8.5E-07 45.3 4.4 20 112-131 215-234 (415)
220 PLN02213 sinapoylglucose-malat 94.9 0.16 3.4E-06 40.8 7.7 85 66-150 2-99 (319)
221 PLN02802 triacylglycerol lipas 94.8 0.051 1.1E-06 45.7 4.7 21 112-132 330-350 (509)
222 COG4947 Uncharacterized protei 94.6 0.13 2.8E-06 36.8 5.6 57 91-149 82-138 (227)
223 PLN02761 lipase class 3 family 94.6 0.058 1.3E-06 45.5 4.5 21 111-131 293-313 (527)
224 PLN02753 triacylglycerol lipas 94.5 0.054 1.2E-06 45.7 4.1 21 111-131 311-331 (531)
225 PF08237 PE-PPE: PE-PPE domain 94.4 0.27 5.9E-06 37.3 7.5 79 65-147 2-89 (225)
226 PLN02719 triacylglycerol lipas 94.3 0.063 1.4E-06 45.2 4.0 20 112-131 298-317 (518)
227 KOG4569 Predicted lipase [Lipi 94.2 0.072 1.6E-06 43.0 4.2 36 91-132 156-191 (336)
228 PLN02847 triacylglycerol lipas 94.1 0.1 2.2E-06 44.7 4.9 25 108-132 247-271 (633)
229 KOG1202 Animal-type fatty acid 94.0 0.17 3.6E-06 47.0 6.3 96 36-147 2122-2219(2376)
230 KOG2029 Uncharacterized conser 93.5 0.18 3.8E-06 43.1 5.4 60 91-150 505-575 (697)
231 KOG3253 Predicted alpha/beta h 93.5 0.31 6.6E-06 41.9 6.6 107 36-149 175-288 (784)
232 PF09949 DUF2183: Uncharacteri 93.3 1.5 3.2E-05 28.6 8.4 82 55-142 14-97 (100)
233 KOG4540 Putative lipase essent 93.2 0.27 5.8E-06 38.3 5.4 42 91-134 257-298 (425)
234 COG5153 CVT17 Putative lipase 93.2 0.27 5.8E-06 38.3 5.4 42 91-134 257-298 (425)
235 TIGR03712 acc_sec_asp2 accesso 92.9 1.7 3.6E-05 36.7 9.9 124 14-149 268-392 (511)
236 PF09994 DUF2235: Uncharacteri 91.0 3.3 7.2E-05 32.6 9.5 94 38-132 2-112 (277)
237 KOG2385 Uncharacterized conser 90.8 0.74 1.6E-05 38.9 5.8 45 106-150 441-490 (633)
238 COG1073 Hydrolases of the alph 89.4 1.5 3.3E-05 34.1 6.6 118 22-148 31-170 (299)
239 COG3673 Uncharacterized conser 88.5 8.9 0.00019 30.8 9.8 96 35-131 29-141 (423)
240 COG0529 CysC Adenylylsulfate k 85.4 12 0.00027 27.3 8.4 62 36-100 21-85 (197)
241 PRK02399 hypothetical protein; 81.3 24 0.00052 29.4 9.5 101 41-143 6-128 (406)
242 COG1448 TyrB Aspartate/tyrosin 79.9 21 0.00045 29.4 8.6 89 36-147 170-265 (396)
243 PF10142 PhoPQ_related: PhoPQ- 79.3 16 0.00034 30.1 8.0 36 108-144 168-203 (367)
244 PF06792 UPF0261: Uncharacteri 79.0 27 0.00058 29.1 9.2 101 40-143 4-126 (403)
245 KOG2521 Uncharacterized conser 78.8 14 0.0003 30.2 7.4 106 39-148 40-153 (350)
246 cd03818 GT1_ExpC_like This fam 76.7 28 0.00061 28.7 9.1 36 40-78 2-37 (396)
247 COG4822 CbiK Cobalamin biosynt 74.7 33 0.00071 25.9 7.7 41 35-75 136-177 (265)
248 COG2830 Uncharacterized protei 74.2 9 0.00019 27.4 4.6 80 35-146 9-89 (214)
249 KOG4389 Acetylcholinesterase/B 72.2 30 0.00064 29.7 7.8 128 23-152 120-260 (601)
250 PF03283 PAE: Pectinacetyleste 71.8 12 0.00027 30.7 5.7 53 93-145 137-193 (361)
251 PF14606 Lipase_GDSL_3: GDSL-l 70.6 24 0.00051 25.8 6.3 66 41-119 36-101 (178)
252 PF01583 APS_kinase: Adenylyls 70.1 27 0.00059 24.9 6.4 38 37-74 1-39 (156)
253 cd01714 ETF_beta The electron 69.5 38 0.00081 25.2 7.4 72 57-143 68-145 (202)
254 PF00448 SRP54: SRP54-type pro 66.2 48 0.001 24.5 7.4 71 57-142 75-147 (196)
255 COG2240 PdxK Pyridoxal/pyridox 65.9 37 0.0008 26.8 6.8 89 56-151 19-117 (281)
256 TIGR02884 spore_pdaA delta-lac 62.5 8.1 0.00018 29.3 2.8 35 38-72 187-221 (224)
257 PRK12467 peptide synthase; Pro 62.3 96 0.0021 34.5 11.1 97 37-143 3692-3791(3956)
258 COG3340 PepE Peptidase E [Amin 61.1 31 0.00067 26.0 5.4 37 37-73 32-70 (224)
259 COG3946 VirJ Type IV secretory 59.7 49 0.0011 27.7 6.7 102 35-143 46-153 (456)
260 PF08484 Methyltransf_14: C-me 59.2 40 0.00086 24.1 5.6 37 110-146 67-103 (160)
261 COG1087 GalE UDP-glucose 4-epi 59.2 62 0.0013 26.0 7.0 26 55-80 14-39 (329)
262 KOG0781 Signal recognition par 59.0 54 0.0012 28.1 6.9 88 41-143 442-538 (587)
263 PF12242 Eno-Rase_NADH_b: NAD( 58.3 40 0.00086 20.8 4.6 45 89-133 16-61 (78)
264 PRK05282 (alpha)-aspartyl dipe 58.1 60 0.0013 24.9 6.7 38 37-74 31-70 (233)
265 PF13207 AAA_17: AAA domain; P 57.6 15 0.00033 24.3 3.2 31 40-73 1-32 (121)
266 PF10081 Abhydrolase_9: Alpha/ 57.4 16 0.00035 28.7 3.6 39 111-149 108-149 (289)
267 cd03146 GAT1_Peptidase_E Type 57.3 53 0.0011 24.6 6.4 86 36-129 30-130 (212)
268 PF06309 Torsin: Torsin; Inte 57.2 13 0.00027 25.5 2.7 31 35-65 50-81 (127)
269 PF05724 TPMT: Thiopurine S-me 55.8 18 0.00038 27.4 3.6 29 39-73 39-67 (218)
270 PRK14974 cell division protein 54.3 1.2E+02 0.0025 24.9 8.1 67 62-143 219-287 (336)
271 smart00827 PKS_AT Acyl transfe 54.0 16 0.00034 28.9 3.2 22 110-131 80-101 (298)
272 TIGR02873 spore_ylxY probable 54.0 12 0.00026 29.3 2.5 34 38-72 231-264 (268)
273 TIGR03131 malonate_mdcH malona 53.4 16 0.00035 28.9 3.2 22 110-131 74-95 (295)
274 PF00698 Acyl_transf_1: Acyl t 53.4 11 0.00024 30.2 2.3 21 110-130 82-102 (318)
275 TIGR02764 spore_ybaN_pdaB poly 53.1 9.2 0.0002 28.0 1.7 34 38-72 152-188 (191)
276 TIGR02069 cyanophycinase cyano 50.1 53 0.0012 25.4 5.5 40 35-74 26-66 (250)
277 cd07225 Pat_PNPLA6_PNPLA7 Pata 49.1 26 0.00056 28.1 3.7 24 110-133 41-64 (306)
278 KOG1252 Cystathionine beta-syn 48.7 73 0.0016 25.9 6.0 59 15-75 187-249 (362)
279 PRK13256 thiopurine S-methyltr 48.5 19 0.00042 27.4 2.8 29 40-74 46-74 (226)
280 PLN02748 tRNA dimethylallyltra 47.9 1.2E+02 0.0027 26.0 7.6 66 36-104 20-108 (468)
281 PHA02114 hypothetical protein 47.6 32 0.0007 22.2 3.2 35 37-72 82-116 (127)
282 TIGR03709 PPK2_rel_1 polyphosp 47.6 23 0.00051 27.7 3.1 39 36-74 54-93 (264)
283 COG0218 Predicted GTPase [Gene 47.5 59 0.0013 24.3 5.0 15 68-82 72-86 (200)
284 TIGR01425 SRP54_euk signal rec 47.3 1.2E+02 0.0025 25.8 7.3 69 60-143 177-247 (429)
285 COG5441 Uncharacterized conser 47.1 1.5E+02 0.0033 23.8 8.0 101 40-142 4-123 (401)
286 TIGR00128 fabD malonyl CoA-acy 46.8 22 0.00048 27.9 3.0 21 111-131 82-102 (290)
287 cd07207 Pat_ExoU_VipD_like Exo 46.8 30 0.00065 25.2 3.6 24 110-133 25-48 (194)
288 TIGR03707 PPK2_P_aer polyphosp 46.4 24 0.00053 26.9 3.0 39 36-74 29-68 (230)
289 TIGR00521 coaBC_dfp phosphopan 46.3 1.7E+02 0.0036 24.5 8.1 89 38-133 113-225 (390)
290 COG0541 Ffh Signal recognition 46.3 1.5E+02 0.0033 25.2 7.6 48 90-143 198-247 (451)
291 COG3727 Vsr DNA G:T-mismatch r 45.6 66 0.0014 22.2 4.6 35 37-71 57-114 (150)
292 cd07198 Patatin Patatin-like p 45.0 36 0.00079 24.4 3.7 25 110-134 24-48 (172)
293 PRK10279 hypothetical protein; 44.8 29 0.00063 27.7 3.4 24 110-133 31-54 (300)
294 PRK06171 sorbitol-6-phosphate 44.8 1.2E+02 0.0025 23.3 6.8 33 40-75 11-43 (266)
295 cd07212 Pat_PNPLA9 Patatin-lik 44.0 20 0.00044 28.7 2.4 19 115-133 35-53 (312)
296 PF03681 UPF0150: Uncharacteri 44.0 22 0.00049 19.3 1.9 34 64-103 12-45 (48)
297 PF09419 PGP_phosphatase: Mito 43.4 87 0.0019 22.7 5.3 53 61-122 36-88 (168)
298 PF11713 Peptidase_C80: Peptid 43.4 24 0.00053 25.1 2.5 56 69-124 57-116 (157)
299 cd07227 Pat_Fungal_NTE1 Fungal 43.1 37 0.00079 26.7 3.6 24 110-133 36-59 (269)
300 PRK05579 bifunctional phosphop 42.6 1.6E+02 0.0034 24.7 7.4 73 38-119 117-196 (399)
301 PRK00091 miaA tRNA delta(2)-is 42.5 1.5E+02 0.0033 23.8 7.1 33 38-73 4-37 (307)
302 PTZ00256 glutathione peroxidas 42.5 68 0.0015 23.3 4.8 57 12-74 21-83 (183)
303 cd07210 Pat_hypo_W_succinogene 42.4 43 0.00093 25.3 3.9 24 110-133 26-49 (221)
304 cd05312 NAD_bind_1_malic_enz N 41.9 42 0.0009 26.5 3.7 83 40-131 27-125 (279)
305 PRK14729 miaA tRNA delta(2)-is 41.3 1.9E+02 0.004 23.3 7.5 61 40-103 6-88 (300)
306 COG0331 FabD (acyl-carrier-pro 41.3 32 0.0007 27.6 3.1 22 110-131 83-104 (310)
307 PF10686 DUF2493: Protein of u 41.0 47 0.001 20.0 3.1 38 37-77 31-71 (71)
308 COG1752 RssA Predicted esteras 40.9 38 0.00083 27.0 3.5 24 110-133 37-60 (306)
309 PF03976 PPK2: Polyphosphate k 40.2 12 0.00026 28.6 0.5 38 37-74 30-68 (228)
310 PF14403 CP_ATPgrasp_2: Circul 40.0 25 0.00054 29.8 2.4 88 28-123 178-278 (445)
311 PRK00131 aroK shikimate kinase 39.5 37 0.00079 24.0 3.0 33 38-73 4-37 (175)
312 KOG3922 Sulfotransferases [Pos 38.8 2.1E+02 0.0045 23.1 6.9 71 36-119 76-147 (361)
313 KOG1209 1-Acyl dihydroxyaceton 38.8 46 0.001 25.3 3.3 36 37-74 6-41 (289)
314 PF01656 CbiA: CobQ/CobB/MinD/ 38.4 50 0.0011 23.8 3.7 37 40-76 1-38 (195)
315 PLN02735 carbamoyl-phosphate s 38.3 2.1E+02 0.0045 27.8 8.3 120 37-165 574-712 (1102)
316 COG3562 KpsS Capsule polysacch 38.2 2.3E+02 0.0049 23.3 7.2 87 39-131 15-103 (403)
317 COG1506 DAP2 Dipeptidyl aminop 37.9 1.2E+02 0.0027 27.0 6.5 46 35-80 549-598 (620)
318 PF06833 MdcE: Malonate decarb 37.8 99 0.0021 23.7 5.0 62 66-131 66-128 (234)
319 cd07209 Pat_hypo_Ecoli_Z1214_l 37.7 48 0.001 24.9 3.5 25 110-134 24-48 (215)
320 COG3933 Transcriptional antite 37.6 2E+02 0.0043 24.6 7.0 75 35-128 107-181 (470)
321 KOG1200 Mitochondrial/plastidi 37.1 1.8E+02 0.0039 21.9 6.5 33 40-75 16-48 (256)
322 PF14253 AbiH: Bacteriophage a 37.1 22 0.00047 27.6 1.6 15 110-124 233-247 (270)
323 PRK10867 signal recognition pa 37.0 2.7E+02 0.0058 23.8 8.9 68 60-142 178-247 (433)
324 PF09370 TIM-br_sig_trns: TIM- 37.0 1.6E+02 0.0036 23.1 6.2 88 55-149 160-252 (268)
325 COG5023 Tubulin [Cytoskeleton] 36.7 2.1E+02 0.0046 23.8 6.9 61 90-152 110-178 (443)
326 COG3887 Predicted signaling pr 36.4 97 0.0021 27.4 5.3 51 91-146 321-377 (655)
327 PRK13690 hypothetical protein; 36.3 82 0.0018 23.0 4.1 33 88-120 2-34 (184)
328 KOG1969 DNA replication checkp 35.8 2.1E+02 0.0044 26.4 7.2 36 35-73 323-359 (877)
329 cd01521 RHOD_PspE2 Member of t 35.7 1.2E+02 0.0025 19.7 4.8 34 35-71 63-96 (110)
330 cd01523 RHOD_Lact_B Member of 35.3 1E+02 0.0022 19.5 4.4 29 35-68 60-88 (100)
331 COG3870 Uncharacterized protei 35.1 1E+02 0.0022 20.1 4.0 72 55-126 14-86 (109)
332 PF08433 KTI12: Chromatin asso 34.4 1.3E+02 0.0028 23.7 5.5 39 39-77 2-41 (270)
333 cd00401 AdoHcyase S-adenosyl-L 34.2 2.9E+02 0.0063 23.4 8.0 67 55-142 75-141 (413)
334 KOG0780 Signal recognition par 34.0 2.6E+02 0.0056 23.6 7.1 19 58-76 176-194 (483)
335 cd07228 Pat_NTE_like_bacteria 34.0 75 0.0016 22.8 3.9 25 110-134 26-50 (175)
336 COG3580 Uncharacterized protei 34.0 2.6E+02 0.0055 22.7 7.1 38 37-75 203-240 (351)
337 PRK06523 short chain dehydroge 33.9 2.1E+02 0.0046 21.7 6.7 32 40-74 11-42 (260)
338 TIGR01626 ytfJ_HI0045 conserve 33.9 1.9E+02 0.0042 21.3 7.5 53 20-73 43-102 (184)
339 cd07205 Pat_PNPLA6_PNPLA7_NTE1 33.8 77 0.0017 22.7 3.9 24 110-133 26-49 (175)
340 PF03205 MobB: Molybdopterin g 33.8 86 0.0019 21.7 4.0 41 40-80 2-43 (140)
341 PF00004 AAA: ATPase family as 32.7 1.5E+02 0.0032 19.5 6.4 52 41-103 1-53 (132)
342 PLN02840 tRNA dimethylallyltra 32.1 3.1E+02 0.0067 23.3 7.5 65 37-104 20-107 (421)
343 COG1763 MobB Molybdopterin-gua 32.0 1.1E+02 0.0023 22.0 4.3 39 39-77 3-42 (161)
344 cd03145 GAT1_cyanophycinase Ty 31.9 1.4E+02 0.0031 22.4 5.2 39 36-74 28-67 (217)
345 KOG3349 Predicted glycosyltran 31.3 1.4E+02 0.0031 21.3 4.6 53 18-70 59-132 (170)
346 PF03033 Glyco_transf_28: Glyc 31.1 32 0.00069 23.3 1.5 34 40-74 2-35 (139)
347 PRK13255 thiopurine S-methyltr 31.1 82 0.0018 23.8 3.8 29 40-74 40-68 (218)
348 TIGR00959 ffh signal recogniti 31.0 3.3E+02 0.0072 23.2 8.3 69 60-143 177-247 (428)
349 PF03853 YjeF_N: YjeF-related 30.6 53 0.0011 23.6 2.6 34 36-70 24-57 (169)
350 TIGR03840 TMPT_Se_Te thiopurin 30.3 89 0.0019 23.5 3.9 28 40-73 37-64 (213)
351 KOG2872 Uroporphyrinogen decar 29.7 78 0.0017 25.2 3.4 30 36-73 251-280 (359)
352 COG0552 FtsY Signal recognitio 29.7 3.2E+02 0.0068 22.4 8.4 76 59-143 215-292 (340)
353 KOG0855 Alkyl hydroperoxide re 29.5 2.2E+02 0.0049 20.7 5.7 57 11-72 69-131 (211)
354 cd03129 GAT1_Peptidase_E_like 29.4 2.4E+02 0.0052 21.0 7.0 90 37-129 29-130 (210)
355 KOG2495 NADH-dehydrogenase (ub 29.4 63 0.0014 27.3 3.0 64 33-102 51-119 (491)
356 KOG2728 Uncharacterized conser 29.4 2.4E+02 0.0052 22.0 5.8 50 14-74 33-82 (302)
357 COG1092 Predicted SAM-dependen 29.3 2.8E+02 0.006 23.3 6.7 41 57-103 280-322 (393)
358 PF00326 Peptidase_S9: Prolyl 29.1 2.3E+02 0.0051 20.7 7.4 44 36-79 143-190 (213)
359 COG2179 Predicted hydrolase of 29.0 2.3E+02 0.005 20.6 5.7 15 106-120 105-119 (175)
360 COG4088 Predicted nucleotide k 28.9 69 0.0015 24.4 2.9 35 39-73 2-37 (261)
361 PRK13948 shikimate kinase; Pro 28.7 76 0.0016 23.2 3.2 34 37-73 9-43 (182)
362 TIGR02816 pfaB_fam PfaB family 28.6 67 0.0015 28.1 3.3 26 108-133 261-286 (538)
363 COG0859 RfaF ADP-heptose:LPS h 28.5 1.2E+02 0.0027 24.5 4.7 36 37-72 175-215 (334)
364 KOG2170 ATPase of the AAA+ sup 28.2 1.5E+02 0.0032 24.0 4.7 31 35-65 107-138 (344)
365 COG1598 Predicted nuclease of 27.8 1.4E+02 0.0031 17.9 4.1 37 63-105 13-49 (73)
366 cd07230 Pat_TGL4-5_like Triacy 27.8 47 0.001 28.0 2.2 27 110-136 99-125 (421)
367 PRK08220 2,3-dihydroxybenzoate 27.7 2.4E+02 0.0052 21.2 6.0 33 40-75 10-42 (252)
368 PRK12828 short chain dehydroge 27.6 99 0.0022 23.0 3.8 31 40-73 9-39 (239)
369 PF01734 Patatin: Patatin-like 27.2 70 0.0015 22.7 2.9 23 110-132 25-47 (204)
370 PRK11613 folP dihydropteroate 27.0 3.2E+02 0.007 21.7 7.7 57 55-125 166-224 (282)
371 PF09989 DUF2229: CoA enzyme a 26.9 1E+02 0.0022 23.4 3.6 36 37-73 184-220 (221)
372 PLN02412 probable glutathione 26.8 2.2E+02 0.0047 20.3 5.3 59 13-76 11-73 (167)
373 PF13671 AAA_33: AAA domain; P 26.7 1.5E+02 0.0033 19.9 4.4 31 40-73 1-32 (143)
374 TIGR03127 RuMP_HxlB 6-phospho 26.6 2.3E+02 0.0049 20.3 5.4 32 40-72 32-63 (179)
375 cd07229 Pat_TGL3_like Triacylg 26.4 60 0.0013 27.1 2.5 30 110-139 109-138 (391)
376 cd02022 DPCK Dephospho-coenzym 26.2 85 0.0018 22.6 3.1 34 40-76 1-34 (179)
377 cd07208 Pat_hypo_Ecoli_yjju_li 26.0 1E+02 0.0022 24.0 3.6 23 113-135 28-50 (266)
378 PRK07933 thymidylate kinase; V 25.9 1.7E+02 0.0037 21.9 4.7 40 40-79 2-42 (213)
379 KOG0743 AAA+-type ATPase [Post 25.9 2.2E+02 0.0047 24.3 5.6 22 55-76 249-271 (457)
380 KOG2585 Uncharacterized conser 25.8 1.5E+02 0.0033 25.1 4.6 38 35-73 264-301 (453)
381 PRK00889 adenylylsulfate kinas 25.6 1.4E+02 0.003 21.3 4.1 36 38-73 4-40 (175)
382 PRK13947 shikimate kinase; Pro 25.5 91 0.002 22.0 3.1 30 41-73 4-34 (171)
383 PRK09072 short chain dehydroge 25.4 1.2E+02 0.0026 23.2 4.0 32 40-74 7-38 (263)
384 COG1255 Uncharacterized protei 25.2 92 0.002 21.0 2.7 22 53-74 24-45 (129)
385 KOG2805 tRNA (5-methylaminomet 25.2 3.8E+02 0.0082 21.9 6.9 36 35-76 4-40 (377)
386 COG4943 Predicted signal trans 25.1 76 0.0016 27.2 2.8 25 55-80 404-428 (524)
387 PF03490 Varsurf_PPLC: Variant 25.1 79 0.0017 17.6 2.0 27 87-119 6-32 (51)
388 COG4850 Uncharacterized conser 24.9 2.7E+02 0.0058 22.8 5.6 37 110-146 276-314 (373)
389 cd07217 Pat17_PNPLA8_PNPLA9_li 24.9 64 0.0014 26.4 2.4 18 115-132 44-61 (344)
390 COG1709 Predicted transcriptio 24.8 1.2E+02 0.0027 23.0 3.6 33 35-70 192-225 (241)
391 PRK06731 flhF flagellar biosyn 24.5 3.5E+02 0.0077 21.3 9.5 63 65-142 154-218 (270)
392 PF13383 Methyltransf_22: Meth 24.3 1.4E+02 0.003 23.1 4.0 39 36-75 191-229 (242)
393 PRK08177 short chain dehydroge 24.3 1.4E+02 0.0031 22.1 4.1 21 55-75 15-35 (225)
394 PRK07523 gluconate 5-dehydroge 24.2 1.3E+02 0.0027 22.9 3.9 32 40-74 12-43 (255)
395 cd07211 Pat_PNPLA8 Patatin-lik 24.1 61 0.0013 25.9 2.1 17 115-131 44-60 (308)
396 PRK13230 nitrogenase reductase 23.6 1.8E+02 0.0039 22.7 4.7 41 39-80 3-44 (279)
397 PRK14194 bifunctional 5,10-met 23.5 1.6E+02 0.0036 23.6 4.3 37 94-132 144-182 (301)
398 TIGR03708 poly_P_AMP_trns poly 23.4 1.3E+02 0.0028 26.1 4.0 41 35-75 37-78 (493)
399 COG3910 Predicted ATPase [Gene 23.3 2.4E+02 0.0053 21.2 4.8 50 55-120 138-187 (233)
400 cd07213 Pat17_PNPLA8_PNPLA9_li 23.2 71 0.0015 25.3 2.3 19 115-133 37-55 (288)
401 TIGR00174 miaA tRNA isopenteny 23.0 2.8E+02 0.0061 22.1 5.6 72 41-119 2-96 (287)
402 COG0426 FpaA Uncharacterized f 22.9 2.4E+02 0.0052 23.6 5.3 74 39-137 250-332 (388)
403 PRK12824 acetoacetyl-CoA reduc 22.9 1.4E+02 0.0031 22.3 3.9 32 40-74 4-35 (245)
404 PRK06953 short chain dehydroge 22.9 1.7E+02 0.0036 21.7 4.3 31 41-74 4-34 (222)
405 PF01075 Glyco_transf_9: Glyco 22.9 1.2E+02 0.0025 23.0 3.4 37 36-72 104-144 (247)
406 cd07218 Pat_iPLA2 Calcium-inde 22.7 1.4E+02 0.0031 23.0 3.8 20 115-134 33-52 (245)
407 COG4475 Uncharacterized protei 22.6 1.8E+02 0.0039 20.7 3.8 29 92-120 4-32 (180)
408 PLN03050 pyridoxine (pyridoxam 22.4 1.6E+02 0.0035 22.8 4.0 33 39-72 62-94 (246)
409 cd07232 Pat_PLPL Patain-like p 22.2 70 0.0015 26.9 2.2 31 110-140 93-123 (407)
410 PRK04148 hypothetical protein; 22.2 2.7E+02 0.0059 19.3 4.7 22 111-132 17-38 (134)
411 COG1089 Gmd GDP-D-mannose dehy 22.2 4E+02 0.0087 21.5 6.0 35 40-77 4-38 (345)
412 PRK09135 pteridine reductase; 22.1 1.5E+02 0.0031 22.3 3.9 32 40-74 8-39 (249)
413 PRK10964 ADP-heptose:LPS hepto 22.1 2.1E+02 0.0045 22.9 4.8 34 37-70 178-215 (322)
414 PRK07326 short chain dehydroge 22.1 1.5E+02 0.0032 22.1 3.9 31 40-73 8-38 (237)
415 KOG1532 GTPase XAB1, interacts 21.8 1.2E+02 0.0026 24.2 3.1 101 35-135 16-149 (366)
416 KOG2941 Beta-1,4-mannosyltrans 21.8 1.3E+02 0.0027 24.9 3.3 38 37-79 14-51 (444)
417 PLN02924 thymidylate kinase 21.7 2E+02 0.0044 21.7 4.4 42 35-76 13-55 (220)
418 cd07231 Pat_SDP1-like Sugar-De 21.7 72 0.0016 25.8 2.0 23 110-132 94-116 (323)
419 PRK12429 3-hydroxybutyrate deh 21.7 1.3E+02 0.0028 22.7 3.5 32 40-74 6-37 (258)
420 PTZ00056 glutathione peroxidas 21.7 2.7E+02 0.0057 20.6 5.0 60 10-76 18-83 (199)
421 TIGR01328 met_gam_lyase methio 21.6 2.4E+02 0.0052 23.5 5.2 26 94-128 317-342 (391)
422 PRK08339 short chain dehydroge 21.5 1.7E+02 0.0036 22.5 4.1 32 40-74 10-41 (263)
423 COG0607 PspE Rhodanese-related 21.5 2.3E+02 0.0049 18.0 4.2 30 35-69 60-89 (110)
424 PRK05876 short chain dehydroge 21.5 1.7E+02 0.0036 22.8 4.1 32 40-74 8-39 (275)
425 PF03698 UPF0180: Uncharacteri 21.4 1.1E+02 0.0024 19.0 2.4 18 55-72 11-28 (80)
426 PRK14179 bifunctional 5,10-met 21.4 2.1E+02 0.0045 22.8 4.5 36 95-132 144-181 (284)
427 TIGR03492 conserved hypothetic 21.3 2.6E+02 0.0057 23.3 5.4 88 41-132 2-111 (396)
428 PRK06849 hypothetical protein; 21.3 4.5E+02 0.0098 21.7 6.8 22 55-76 18-39 (389)
429 CHL00175 minD septum-site dete 21.3 2.3E+02 0.0049 22.1 4.8 38 37-74 15-53 (281)
430 PRK08703 short chain dehydroge 21.3 1.7E+02 0.0038 21.9 4.1 32 40-74 8-39 (239)
431 TIGR00176 mobB molybdopterin-g 21.2 1.7E+02 0.0037 20.7 3.7 38 41-78 2-40 (155)
432 COG1225 Bcp Peroxiredoxin [Pos 21.1 3.2E+02 0.007 19.6 6.6 59 10-73 9-72 (157)
433 PRK06762 hypothetical protein; 21.1 1.1E+02 0.0025 21.5 2.9 24 38-64 2-25 (166)
434 PRK06550 fabG 3-ketoacyl-(acyl 21.0 1.9E+02 0.0041 21.5 4.2 32 40-74 7-38 (235)
435 PRK13938 phosphoheptose isomer 20.9 3.1E+02 0.0068 20.3 5.2 25 110-134 44-68 (196)
436 PF13728 TraF: F plasmid trans 20.8 2.4E+02 0.0053 21.3 4.7 43 37-80 122-165 (215)
437 PRK08085 gluconate 5-dehydroge 20.8 1.6E+02 0.0035 22.3 3.9 32 40-74 11-42 (254)
438 TIGR01019 sucCoAalpha succinyl 20.7 4.4E+02 0.0096 21.0 7.0 92 35-146 87-179 (286)
439 PF02882 THF_DHG_CYH_C: Tetrah 20.7 2.4E+02 0.0051 20.2 4.3 38 93-132 20-59 (160)
440 COG2820 Udp Uridine phosphoryl 20.6 4.1E+02 0.0088 20.7 5.6 32 35-69 56-87 (248)
441 cd00883 beta_CA_cladeA Carboni 20.6 1.5E+02 0.0033 21.7 3.4 21 110-130 79-99 (182)
442 TIGR01963 PHB_DH 3-hydroxybuty 20.6 1.7E+02 0.0038 22.0 4.0 32 40-74 3-34 (255)
443 PRK13869 plasmid-partitioning 20.6 2.2E+02 0.0048 23.9 4.8 41 38-78 122-163 (405)
444 cd07025 Peptidase_S66 LD-Carbo 20.5 4.2E+02 0.0092 20.9 6.2 42 55-100 17-58 (282)
445 PF14359 DUF4406: Domain of un 20.4 2.5E+02 0.0053 17.9 6.3 66 54-134 18-86 (92)
446 TIGR03162 ribazole_cobC alpha- 20.4 3.2E+02 0.007 19.3 5.3 32 87-120 115-146 (177)
447 PRK06696 uridine kinase; Valid 20.4 2.2E+02 0.0048 21.3 4.5 38 35-72 19-57 (223)
448 TIGR02193 heptsyl_trn_I lipopo 20.4 2.3E+02 0.0051 22.5 4.8 36 36-71 178-217 (319)
449 cd01518 RHOD_YceA Member of th 20.3 1.9E+02 0.0041 18.2 3.6 32 35-71 60-92 (101)
450 KOG0744 AAA+-type ATPase [Post 20.2 1.7E+02 0.0037 24.0 3.8 34 39-76 178-211 (423)
451 COG0489 Mrp ATPases involved i 20.1 3E+02 0.0065 21.5 5.2 45 36-80 56-101 (265)
452 PF01118 Semialdhyde_dh: Semia 20.1 1.3E+02 0.0028 20.0 2.8 30 113-143 1-31 (121)
453 PRK00726 murG undecaprenyldiph 20.1 4.7E+02 0.01 21.0 7.2 35 39-74 4-38 (357)
454 PRK05717 oxidoreductase; Valid 20.0 1.7E+02 0.0037 22.2 3.8 32 40-74 12-43 (255)
455 PRK05653 fabG 3-ketoacyl-(acyl 20.0 1.5E+02 0.0032 22.1 3.5 31 40-73 7-37 (246)
456 PLN03006 carbonate dehydratase 20.0 1.5E+02 0.0033 23.8 3.5 20 110-129 170-189 (301)
457 PRK05786 fabG 3-ketoacyl-(acyl 20.0 1.6E+02 0.0035 21.9 3.7 32 40-74 7-38 (238)
No 1
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=100.00 E-value=7.1e-38 Score=235.10 Aligned_cols=230 Identities=56% Similarity=1.008 Sum_probs=214.8
Q ss_pred CccccceeEeecCCcEEEEEEeecCCC-CCcEEEEEEcCCCCCCcCchHHHHHHHHhcCCEEEEeecCCCCCCCCCCCCc
Q 026555 8 NIKYDEEFILNSRRVKLFTCSWIPQNQ-EPKALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSGYI 86 (237)
Q Consensus 8 ~~~~~~~~~~~~~g~~l~~~~~~~~~~-~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~ 86 (237)
+......++.+.+|..+.++.|.|..+ +++..|+++||+++++...+..++..|++.||.|+++|++|||.|++...+.
T Consensus 24 ~~~~~~~~~~n~rG~~lft~~W~p~~~~~pr~lv~~~HG~g~~~s~~~~~~a~~l~~~g~~v~a~D~~GhG~SdGl~~yi 103 (313)
T KOG1455|consen 24 GVTYSESFFTNPRGAKLFTQSWLPLSGTEPRGLVFLCHGYGEHSSWRYQSTAKRLAKSGFAVYAIDYEGHGRSDGLHAYV 103 (313)
T ss_pred ccceeeeeEEcCCCCEeEEEecccCCCCCCceEEEEEcCCcccchhhHHHHHHHHHhCCCeEEEeeccCCCcCCCCcccC
Confidence 344567788999999999999999764 7789999999999998766689999999999999999999999999999998
Q ss_pred CChhhHHHHHHHHHHHHHhhhhcCCceEEEEEeccchHHHHHHHhcCCCcccEEEEcCCccccccccCChHHHHHHHHHh
Q 026555 87 DNFDDLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKIAENVKPHPLVISVLTKL 166 (237)
Q Consensus 87 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~ 166 (237)
.+++..++|+..+++.++.+......+.+++||||||.+++.++.+.|+..+|+|+++|.......+.+.+.....+..+
T Consensus 104 ~~~d~~v~D~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~p~~w~G~ilvaPmc~i~~~~kp~p~v~~~l~~l 183 (313)
T KOG1455|consen 104 PSFDLVVDDVISFFDSIKEREENKGLPRFLFGESMGGAVALLIALKDPNFWDGAILVAPMCKISEDTKPHPPVISILTLL 183 (313)
T ss_pred CcHHHHHHHHHHHHHHHhhccccCCCCeeeeecCcchHHHHHHHhhCCcccccceeeecccccCCccCCCcHHHHHHHHH
Confidence 99999999999999998777777888999999999999999999999999999999999999999999999999999999
Q ss_pred hhhCcCCcccCCCCcchhhccCHHHHHhhhhCCCcccCCCchhHHHHHHHHHHHHHhhccceeeeeeeecC
Q 026555 167 CKFIPTWKIIPSQDIVDVAFKLPEKRKEIRANPYCYKGRPRLKTGYELMRVSMDLENRLDEVCSKIFNTKA 237 (237)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~g 237 (237)
..+.|.|...+.+......+++++.+.....+|+++....++++..++++...++.+++.++++|.+|+||
T Consensus 184 ~~liP~wk~vp~~d~~~~~~kdp~~r~~~~~npl~y~g~pRl~T~~ElLr~~~~le~~l~~vtvPflilHG 254 (313)
T KOG1455|consen 184 SKLIPTWKIVPTKDIIDVAFKDPEKRKILRSDPLCYTGKPRLKTAYELLRVTADLEKNLNEVTVPFLILHG 254 (313)
T ss_pred HHhCCceeecCCccccccccCCHHHHHHhhcCCceecCCccHHHHHHHHHHHHHHHHhcccccccEEEEec
Confidence 99999999888777888899999999999999999999999999999999999999999999999999998
No 2
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=100.00 E-value=1.2e-32 Score=222.16 Aligned_cols=230 Identities=42% Similarity=0.802 Sum_probs=160.0
Q ss_pred CccccceeEeecCCcEEEEEEeecCCCCCcEEEEEEcCCCCCCcCchHHHHHHHHhcCCEEEEeecCCCCCCCCCCCCcC
Q 026555 8 NIKYDEEFILNSRRVKLFTCSWIPQNQEPKALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSGYID 87 (237)
Q Consensus 8 ~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~ 87 (237)
+..+++.+..+.+|.++++..|.|.+++++++|||+||++++...|+..+++.|++.||+|+++|+||||.|++......
T Consensus 58 ~~~~~~~~~~~~~g~~l~~~~~~p~~~~~~~~iv~lHG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~ 137 (349)
T PLN02385 58 GIKTEESYEVNSRGVEIFSKSWLPENSRPKAAVCFCHGYGDTCTFFFEGIARKIASSGYGVFAMDYPGFGLSEGLHGYIP 137 (349)
T ss_pred CcceeeeeEEcCCCCEEEEEEEecCCCCCCeEEEEECCCCCccchHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCCCcC
Confidence 45566677888999999999999876567899999999999877655889999998899999999999999986544445
Q ss_pred ChhhHHHHHHHHHHHHHhhhhcCCceEEEEEeccchHHHHHHHhcCCCcccEEEEcCCccccccccCChHHHHHHHHHhh
Q 026555 88 NFDDLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKIAENVKPHPLVISVLTKLC 167 (237)
Q Consensus 88 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (237)
+++++++|+.++++.+.........+++++||||||++++.++.++|++++++|+++|.........+..........+.
T Consensus 138 ~~~~~~~dv~~~l~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~~p~~v~glVLi~p~~~~~~~~~~~~~~~~~~~~~~ 217 (349)
T PLN02385 138 SFDDLVDDVIEHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVHLKQPNAWDGAILVAPMCKIADDVVPPPLVLQILILLA 217 (349)
T ss_pred CHHHHHHHHHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHhCcchhhheeEecccccccccccCchHHHHHHHHHH
Confidence 88999999999998873222223458999999999999999999999999999999987765433323333333333333
Q ss_pred hhCcCCcccCCCCcchhhccCHHHHHhhhhCCCcccCCCchhHHHHHHHHHHHHHhhccceeeeeeeecC
Q 026555 168 KFIPTWKIIPSQDIVDVAFKLPEKRKEIRANPYCYKGRPRLKTGYELMRVSMDLENRLDEVCSKIFNTKA 237 (237)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~g 237 (237)
...+.........+......+.........+.........+.....++....+..+.+.+|++|+|||+|
T Consensus 218 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~i~~P~Lii~G 287 (349)
T PLN02385 218 NLLPKAKLVPQKDLAELAFRDLKKRKMAEYNVIAYKDKPRLRTAVELLRTTQEIEMQLEEVSLPLLILHG 287 (349)
T ss_pred HHCCCceecCCCccccccccCHHHHHHhhcCcceeCCCcchHHHHHHHHHHHHHHHhcccCCCCEEEEEe
Confidence 3344332222212222222332222222222222222334455555555555667789999999999997
No 3
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=100.00 E-value=3.4e-31 Score=212.29 Aligned_cols=229 Identities=43% Similarity=0.787 Sum_probs=153.8
Q ss_pred ccccceeEeecCCcEEEEEEeecCCC-CCcEEEEEEcCCCCCCcCchHHHHHHHHhcCCEEEEeecCCCCCCCCCCCCcC
Q 026555 9 IKYDEEFILNSRRVKLFTCSWIPQNQ-EPKALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSGYID 87 (237)
Q Consensus 9 ~~~~~~~~~~~~g~~l~~~~~~~~~~-~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~ 87 (237)
+..+..++...||.+++|+.|.|... +++++|||+||++.+....+..++..|+++||+|+++|+||||.|.+......
T Consensus 30 ~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~VvllHG~~~~~~~~~~~~~~~L~~~Gy~V~~~D~rGhG~S~~~~~~~~ 109 (330)
T PLN02298 30 IKGSKSFFTSPRGLSLFTRSWLPSSSSPPRALIFMVHGYGNDISWTFQSTAIFLAQMGFACFALDLEGHGRSEGLRAYVP 109 (330)
T ss_pred CccccceEEcCCCCEEEEEEEecCCCCCCceEEEEEcCCCCCcceehhHHHHHHHhCCCEEEEecCCCCCCCCCccccCC
Confidence 44556778888999999999987643 46789999999987654333677888998999999999999999986544345
Q ss_pred ChhhHHHHHHHHHHHHHhhhhcCCceEEEEEeccchHHHHHHHhcCCCcccEEEEcCCccccccccCChHHHHHHHHHhh
Q 026555 88 NFDDLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKIAENVKPHPLVISVLTKLC 167 (237)
Q Consensus 88 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (237)
+++.+++|+.++++.+.........+++++||||||.+++.++.++|++++++|+++|.........+.+..........
T Consensus 110 ~~~~~~~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (330)
T PLN02298 110 NVDLVVEDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLANPEGFDGAVLVAPMCKISDKIRPPWPIPQILTFVA 189 (330)
T ss_pred CHHHHHHHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcCcccceeEEEecccccCCcccCCchHHHHHHHHHH
Confidence 78899999999999984332233458999999999999999999999999999999988765443222222222222333
Q ss_pred hhCcCCcccCCCCcchhhccCHHHHHhhhhCCCcccCCCchhHHHHHHHHHHHHHhhccceeeeeeeecC
Q 026555 168 KFIPTWKIIPSQDIVDVAFKLPEKRKEIRANPYCYKGRPRLKTGYELMRVSMDLENRLDEVCSKIFNTKA 237 (237)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~g 237 (237)
...+.................+........++..+.......+............+.+.+|++|+|||+|
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G 259 (330)
T PLN02298 190 RFLPTLAIVPTADLLEKSVKVPAKKIIAKRNPMRYNGKPRLGTVVELLRVTDYLGKKLKDVSIPFIVLHG 259 (330)
T ss_pred HHCCCCccccCCCcccccccCHHHHHHHHhCccccCCCccHHHHHHHHHHHHHHHHhhhhcCCCEEEEec
Confidence 3333322111111111111122222222234433332334444455555444566788999999999997
No 4
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.98 E-value=7.2e-31 Score=205.60 Aligned_cols=226 Identities=23% Similarity=0.332 Sum_probs=179.6
Q ss_pred CccccceeEeecCCcEEEEEEeecCCCCCcEEEEEEcCCCCCCcCchHHHHHHHHhcCCEEEEeecCCCCCCC-CCCCCc
Q 026555 8 NIKYDEEFILNSRRVKLFTCSWIPQNQEPKALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSA-GLSGYI 86 (237)
Q Consensus 8 ~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~-~~~~~~ 86 (237)
.....+.++...||..+.|+.|.+.+ .++.+||++||++++...| ..++..|...||.|+++|+||||.|. +.....
T Consensus 6 ~~~~~~~~~~~~d~~~~~~~~~~~~~-~~~g~Vvl~HG~~Eh~~ry-~~la~~l~~~G~~V~~~D~RGhG~S~r~~rg~~ 83 (298)
T COG2267 6 PRTRTEGYFTGADGTRLRYRTWAAPE-PPKGVVVLVHGLGEHSGRY-EELADDLAARGFDVYALDLRGHGRSPRGQRGHV 83 (298)
T ss_pred ccccccceeecCCCceEEEEeecCCC-CCCcEEEEecCchHHHHHH-HHHHHHHHhCCCEEEEecCCCCCCCCCCCcCCc
Confidence 34456788899999999999998775 4458999999999999988 89999999999999999999999998 666666
Q ss_pred CChhhHHHHHHHHHHHHHhhhhcCCceEEEEEeccchHHHHHHHhcCCCcccEEEEcCCccccccccCChHHHHHHHHHh
Q 026555 87 DNFDDLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKIAENVKPHPLVISVLTKL 166 (237)
Q Consensus 87 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~ 166 (237)
.++.++.+|+..+++.+ .......+++++||||||.|++.++.+++..++++||.+|.....................
T Consensus 84 ~~f~~~~~dl~~~~~~~--~~~~~~~p~~l~gHSmGg~Ia~~~~~~~~~~i~~~vLssP~~~l~~~~~~~~~~~~~~~~~ 161 (298)
T COG2267 84 DSFADYVDDLDAFVETI--AEPDPGLPVFLLGHSMGGLIALLYLARYPPRIDGLVLSSPALGLGGAILRLILARLALKLL 161 (298)
T ss_pred hhHHHHHHHHHHHHHHH--hccCCCCCeEEEEeCcHHHHHHHHHHhCCccccEEEEECccccCChhHHHHHHHHHhcccc
Confidence 77999999999999998 3334578999999999999999999999999999999999998864111122223333333
Q ss_pred hhhCcCCcccC---CCCcchhhccCHHHHHhhhhCCCcccCCCchhHHHHHHHHHH-HHHhhccceeeeeeeecC
Q 026555 167 CKFIPTWKIIP---SQDIVDVAFKLPEKRKEIRANPYCYKGRPRLKTGYELMRVSM-DLENRLDEVCSKIFNTKA 237 (237)
Q Consensus 167 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~i~~P~lii~g 237 (237)
....+.+.... .........++++..+.+..+|.+.....+..|....+.... ...+....+++|+||++|
T Consensus 162 ~~~~p~~~~~~~~~~~~~~~~~sr~~~~~~~~~~dP~~~~~~~~~~w~~~~~~a~~~~~~~~~~~~~~PvLll~g 236 (298)
T COG2267 162 GRIRPKLPVDSNLLEGVLTDDLSRDPAEVAAYEADPLIGVGGPVSRWVDLALLAGRVPALRDAPAIALPVLLLQG 236 (298)
T ss_pred cccccccccCcccccCcCcchhhcCHHHHHHHhcCCccccCCccHHHHHHHHHhhcccchhccccccCCEEEEec
Confidence 44444444332 123355678899999999999998877788888888776654 345567889999999987
No 5
>PHA02857 monoglyceride lipase; Provisional
Probab=99.97 E-value=3.3e-29 Score=196.05 Aligned_cols=214 Identities=21% Similarity=0.352 Sum_probs=145.8
Q ss_pred eeEeecCCcEEEEEEeecCCCCCcEEEEEEcCCCCCCcCchHHHHHHHHhcCCEEEEeecCCCCCCCCCCCCcCChhhHH
Q 026555 14 EFILNSRRVKLFTCSWIPQNQEPKALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDDLV 93 (237)
Q Consensus 14 ~~~~~~~g~~l~~~~~~~~~~~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~ 93 (237)
.++...||.++.|+.|.|.. .++++|+++||++++...| ..+++.|.++||+|+++|+||||.|++......++.+++
T Consensus 3 ~~~~~~~g~~l~~~~~~~~~-~~~~~v~llHG~~~~~~~~-~~~~~~l~~~g~~via~D~~G~G~S~~~~~~~~~~~~~~ 80 (276)
T PHA02857 3 NCMFNLDNDYIYCKYWKPIT-YPKALVFISHGAGEHSGRY-EELAENISSLGILVFSHDHIGHGRSNGEKMMIDDFGVYV 80 (276)
T ss_pred ceeecCCCCEEEEEeccCCC-CCCEEEEEeCCCccccchH-HHHHHHHHhCCCEEEEccCCCCCCCCCccCCcCCHHHHH
Confidence 35677899999999998864 5678899999999998877 999999999999999999999999986433334667778
Q ss_pred HHHHHHHHHHHhhhhcCCceEEEEEeccchHHHHHHHhcCCCcccEEEEcCCccccccccCChHHHHHHHHHhhh-hCcC
Q 026555 94 DDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKIAENVKPHPLVISVLTKLCK-FIPT 172 (237)
Q Consensus 94 ~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 172 (237)
+|+.++++.+ +.....++++++||||||++++.+|.++|++++++|+++|...... . ............ ..+.
T Consensus 81 ~d~~~~l~~~--~~~~~~~~~~lvG~S~GG~ia~~~a~~~p~~i~~lil~~p~~~~~~--~--~~~~~~~~~~~~~~~~~ 154 (276)
T PHA02857 81 RDVVQHVVTI--KSTYPGVPVFLLGHSMGATISILAAYKNPNLFTAMILMSPLVNAEA--V--PRLNLLAAKLMGIFYPN 154 (276)
T ss_pred HHHHHHHHHH--HhhCCCCCEEEEEcCchHHHHHHHHHhCccccceEEEecccccccc--c--cHHHHHHHHHHHHhCCC
Confidence 8888888776 3334457899999999999999999999999999999998765321 1 111111111111 1111
Q ss_pred CcccCCCCcchhhccCHHHHHhhhhCCCcccCCCchhHHHHHHHHHHHHHhhccceeeeeeeecC
Q 026555 173 WKIIPSQDIVDVAFKLPEKRKEIRANPYCYKGRPRLKTGYELMRVSMDLENRLDEVCSKIFNTKA 237 (237)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~g 237 (237)
.... .........+......+..++..........+.........+..+.+.+|++|||+|+|
T Consensus 155 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvliv~G 217 (276)
T PHA02857 155 KIVG--KLCPESVSRDMDEVYKYQYDPLVNHEKIKAGFASQVLKATNKVRKIIPKIKTPILILQG 217 (276)
T ss_pred CccC--CCCHhhccCCHHHHHHHhcCCCccCCCccHHHHHHHHHHHHHHHHhcccCCCCEEEEec
Confidence 1110 01111222333333344445543332333444445544445667788999999999997
No 6
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.97 E-value=4.3e-28 Score=196.89 Aligned_cols=222 Identities=27% Similarity=0.472 Sum_probs=155.1
Q ss_pred ccccceeEeecCCcEEEEEEeecCCCCCcEEEEEEcCCCCCCcCchHHHHHHHHhcCCEEEEeecCCCCCCCCCCCCcCC
Q 026555 9 IKYDEEFILNSRRVKLFTCSWIPQNQEPKALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDN 88 (237)
Q Consensus 9 ~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~ 88 (237)
....+..+...++..+.+..|.|..++++++||++||++++...| ..+++.|++.||+|+++|+||||.|++......+
T Consensus 108 ~~~~~~~~~~~~~~~l~~~~~~p~~~~~~~~Vl~lHG~~~~~~~~-~~~a~~L~~~Gy~V~~~D~rGhG~S~~~~~~~~~ 186 (395)
T PLN02652 108 TRWATSLFYGARRNALFCRSWAPAAGEMRGILIIIHGLNEHSGRY-LHFAKQLTSCGFGVYAMDWIGHGGSDGLHGYVPS 186 (395)
T ss_pred ceEEEEEEECCCCCEEEEEEecCCCCCCceEEEEECCchHHHHHH-HHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCcC
Confidence 334556677788899999999997556788999999999988767 8999999999999999999999999876555567
Q ss_pred hhhHHHHHHHHHHHHHhhhhcCCceEEEEEeccchHHHHHHHhcCC---CcccEEEEcCCccccccccCChHHHHHHHHH
Q 026555 89 FDDLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKP---DYFDGAVLVAPMCKIAENVKPHPLVISVLTK 165 (237)
Q Consensus 89 ~~~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p---~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~ 165 (237)
++.+++|+.++++.+ ..+.+..+++++||||||.+++.++. +| +.++++|+.+|....... ..........
T Consensus 187 ~~~~~~Dl~~~l~~l--~~~~~~~~i~lvGhSmGG~ial~~a~-~p~~~~~v~glVL~sP~l~~~~~---~~~~~~~~~l 260 (395)
T PLN02652 187 LDYVVEDTEAFLEKI--RSENPGVPCFLFGHSTGGAVVLKAAS-YPSIEDKLEGIVLTSPALRVKPA---HPIVGAVAPI 260 (395)
T ss_pred HHHHHHHHHHHHHHH--HHhCCCCCEEEEEECHHHHHHHHHHh-ccCcccccceEEEECcccccccc---hHHHHHHHHH
Confidence 888899999999998 43334568999999999999998764 55 479999999988654321 1111112222
Q ss_pred hhhhCcCCcccCCCCcchhhccCHHHHHhhhhCCCcccCCCchhHHHHHHHHHHHHHhhccceeeeeeeecC
Q 026555 166 LCKFIPTWKIIPSQDIVDVAFKLPEKRKEIRANPYCYKGRPRLKTGYELMRVSMDLENRLDEVCSKIFNTKA 237 (237)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~g 237 (237)
.....+.+.+............+++.......++..........+...++.....+.+.+.+|++|+|||+|
T Consensus 261 ~~~~~p~~~~~~~~~~~~~~s~~~~~~~~~~~dp~~~~g~i~~~~~~~~~~~~~~l~~~L~~I~vPvLIi~G 332 (395)
T PLN02652 261 FSLVAPRFQFKGANKRGIPVSRDPAALLAKYSDPLVYTGPIRVRTGHEILRISSYLTRNFKSVTVPFMVLHG 332 (395)
T ss_pred HHHhCCCCcccCcccccCCcCCCHHHHHHHhcCCCcccCCchHHHHHHHHHHHHHHHhhcccCCCCEEEEEe
Confidence 233344333222111111223344444444455555444444455555555444567788999999999987
No 7
>PRK10749 lysophospholipase L2; Provisional
Probab=99.96 E-value=1.3e-27 Score=191.29 Aligned_cols=220 Identities=21% Similarity=0.284 Sum_probs=147.0
Q ss_pred cceeEeecCCcEEEEEEeecCCCCCcEEEEEEcCCCCCCcCchHHHHHHHHhcCCEEEEeecCCCCCCCCCC-----CCc
Q 026555 12 DEEFILNSRRVKLFTCSWIPQNQEPKALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLS-----GYI 86 (237)
Q Consensus 12 ~~~~~~~~~g~~l~~~~~~~~~~~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~-----~~~ 86 (237)
++.++...+|.+++|..+.+. +++++||++||++++...| ..++..+.+.||+|+++|+||||.|.... ...
T Consensus 31 ~~~~~~~~~g~~l~~~~~~~~--~~~~~vll~HG~~~~~~~y-~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~ 107 (330)
T PRK10749 31 EEAEFTGVDDIPIRFVRFRAP--HHDRVVVICPGRIESYVKY-AELAYDLFHLGYDVLIIDHRGQGRSGRLLDDPHRGHV 107 (330)
T ss_pred cceEEEcCCCCEEEEEEccCC--CCCcEEEEECCccchHHHH-HHHHHHHHHCCCeEEEEcCCCCCCCCCCCCCCCcCcc
Confidence 456777889999999999875 4467899999999988877 88998898999999999999999997432 122
Q ss_pred CChhhHHHHHHHHHHHHHhhhhcCCceEEEEEeccchHHHHHHHhcCCCcccEEEEcCCccccccccCChHHHHHHHHHh
Q 026555 87 DNFDDLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKIAENVKPHPLVISVLTKL 166 (237)
Q Consensus 87 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~ 166 (237)
.+++++++|+.++++.+ ....+..+++++||||||.+++.++.++|+.++++|+++|........ +...........
T Consensus 108 ~~~~~~~~d~~~~~~~~--~~~~~~~~~~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~-~~~~~~~~~~~~ 184 (330)
T PRK10749 108 ERFNDYVDDLAAFWQQE--IQPGPYRKRYALAHSMGGAILTLFLQRHPGVFDAIALCAPMFGIVLPL-PSWMARRILNWA 184 (330)
T ss_pred ccHHHHHHHHHHHHHHH--HhcCCCCCeEEEEEcHHHHHHHHHHHhCCCCcceEEEECchhccCCCC-CcHHHHHHHHHH
Confidence 47899999999999887 333356799999999999999999999999999999999876543221 112212111111
Q ss_pred hhh---CcCCc-----ccCCCCcchhhccCHH----HHHhhhhCCCcccCCCchhHHHHHHHHHHHHHhhccceeeeeee
Q 026555 167 CKF---IPTWK-----IIPSQDIVDVAFKLPE----KRKEIRANPYCYKGRPRLKTGYELMRVSMDLENRLDEVCSKIFN 234 (237)
Q Consensus 167 ~~~---~~~~~-----~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~li 234 (237)
... ..... .............+++ ..+.+..++.+........+....+....++...++++++||||
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Li 264 (330)
T PRK10749 185 EGHPRIRDGYAIGTGRWRPLPFAINVLTHSRERYRRNLRFYADDPELRVGGPTYHWVRESILAGEQVLAGAGDITTPLLL 264 (330)
T ss_pred HHhcCCCCcCCCCCCCCCCCCcCCCCCCCCHHHHHHHHHHHHhCCCcccCCCcHHHHHHHHHHHHHHHhhccCCCCCEEE
Confidence 111 00000 0000001111222332 22334444433222234455555555444566778999999999
Q ss_pred ecC
Q 026555 235 TKA 237 (237)
Q Consensus 235 i~g 237 (237)
|+|
T Consensus 265 i~G 267 (330)
T PRK10749 265 LQA 267 (330)
T ss_pred EEe
Confidence 997
No 8
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.95 E-value=9.3e-27 Score=186.07 Aligned_cols=216 Identities=26% Similarity=0.402 Sum_probs=157.8
Q ss_pred EeecCCcEEEEEEeecCCCCCcEEEEEEcCCCCCCcC-ch------------------------HHHHHHHHhcCCEEEE
Q 026555 16 ILNSRRVKLFTCSWIPQNQEPKALIFICHGYAMECSI-GM------------------------NSTAIRLANEGYACYG 70 (237)
Q Consensus 16 ~~~~~g~~l~~~~~~~~~~~~~~~iv~~hG~~~~~~~-~~------------------------~~~~~~l~~~g~~v~~ 70 (237)
+.+.||.+|+++.|.|. +++.+|+++||++++... ++ ..+++.|.+.||+|++
T Consensus 2 ~~~~~g~~l~~~~~~~~--~~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~~~G~~V~~ 79 (332)
T TIGR01607 2 FRNKDGLLLKTYSWIVK--NAIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFNKNGYSVYG 79 (332)
T ss_pred ccCCCCCeEEEeeeecc--CCeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHHHCCCcEEE
Confidence 45679999999999886 678999999999999872 11 3678999999999999
Q ss_pred eecCCCCCCCCC---CCCcCChhhHHHHHHHHHHHHHhhh-----------------hcC-CceEEEEEeccchHHHHHH
Q 026555 71 IDYQGHGKSAGL---SGYIDNFDDLVDDCFNHFTSICEKE-----------------ENK-EKMRYLLGESMGGAMVLLL 129 (237)
Q Consensus 71 ~d~~g~G~s~~~---~~~~~~~~~~~~d~~~~~~~~~~~~-----------------~~~-~~~~~l~G~S~Gg~~a~~~ 129 (237)
+|+||||.|.+. .....+++++++|+.++++.+.+.. ... ..|++++||||||.+++.+
T Consensus 80 ~D~rGHG~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i~~~~ 159 (332)
T TIGR01607 80 LDLQGHGESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNIALRL 159 (332)
T ss_pred ecccccCCCccccccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHHHHHH
Confidence 999999998854 2223478999999999999873210 122 4689999999999999999
Q ss_pred HhcCCC--------cccEEEEcCCcccccccc-----CChHHHHHHHHHhhhhCcCCcccCCCCcchhhccCHHHHHhhh
Q 026555 130 HRKKPD--------YFDGAVLVAPMCKIAENV-----KPHPLVISVLTKLCKFIPTWKIIPSQDIVDVAFKLPEKRKEIR 196 (237)
Q Consensus 130 a~~~p~--------~~~~~vl~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (237)
+.++++ .++++|+++|........ .........+..+....|...... ......++...+.+.
T Consensus 160 ~~~~~~~~~~~~~~~i~g~i~~s~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~----~~~~~~~~~~~~~~~ 235 (332)
T TIGR01607 160 LELLGKSNENNDKLNIKGCISLSGMISIKSVGSDDSFKFKYFYLPVMNFMSRVFPTFRISK----KIRYEKSPYVNDIIK 235 (332)
T ss_pred HHHhccccccccccccceEEEeccceEEecccCCCcchhhhhHHHHHHHHHHHCCcccccC----ccccccChhhhhHHh
Confidence 876542 589999999886543211 011222333344444555443221 123445677788888
Q ss_pred hCCCcccCCCchhHHHHHHHHHHHHHhhccce--eeeeeeecC
Q 026555 197 ANPYCYKGRPRLKTGYELMRVSMDLENRLDEV--CSKIFNTKA 237 (237)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i--~~P~lii~g 237 (237)
.|+++.....+..+...++.....+.+.++++ ++|+|+|+|
T Consensus 236 ~Dp~~~~~~~s~~~~~~l~~~~~~~~~~~~~i~~~~P~Lii~G 278 (332)
T TIGR01607 236 FDKFRYDGGITFNLASELIKATDTLDCDIDYIPKDIPILFIHS 278 (332)
T ss_pred cCccccCCcccHHHHHHHHHHHHHHHhhHhhCCCCCCEEEEEe
Confidence 89988776778888888888776676677777 799999987
No 9
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=99.94 E-value=3.6e-26 Score=178.90 Aligned_cols=123 Identities=15% Similarity=0.128 Sum_probs=104.9
Q ss_pred EeecCCcEEEEEEeecCCCCCcEEEEEEcCCCCCCcCchHHHHHHHHhcCCEEEEeecCCCCCCCCCCCCcCChhhHHHH
Q 026555 16 ILNSRRVKLFTCSWIPQNQEPKALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDDLVDD 95 (237)
Q Consensus 16 ~~~~~g~~l~~~~~~~~~~~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~d 95 (237)
+...+|.+++|..+... ..+++|||+||++++...| ..+.+.|.+ +|+|+++|+||||.|+.... .++++++++|
T Consensus 6 ~~~~~~~~~~~~~~~~~--~~~~plvllHG~~~~~~~w-~~~~~~L~~-~~~vi~~Dl~G~G~S~~~~~-~~~~~~~~~~ 80 (276)
T TIGR02240 6 TIDLDGQSIRTAVRPGK--EGLTPLLIFNGIGANLELV-FPFIEALDP-DLEVIAFDVPGVGGSSTPRH-PYRFPGLAKL 80 (276)
T ss_pred EeccCCcEEEEEEecCC--CCCCcEEEEeCCCcchHHH-HHHHHHhcc-CceEEEECCCCCCCCCCCCC-cCcHHHHHHH
Confidence 34558889999876322 2346799999999999977 899999976 49999999999999985433 3688999999
Q ss_pred HHHHHHHHHhhhhcCCceEEEEEeccchHHHHHHHhcCCCcccEEEEcCCcccc
Q 026555 96 CFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKI 149 (237)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~~~~vl~~~~~~~ 149 (237)
+.++++.+ +.++++++||||||.+++.+|.++|++++++|++++....
T Consensus 81 ~~~~i~~l------~~~~~~LvG~S~GG~va~~~a~~~p~~v~~lvl~~~~~~~ 128 (276)
T TIGR02240 81 AARMLDYL------DYGQVNAIGVSWGGALAQQFAHDYPERCKKLILAATAAGA 128 (276)
T ss_pred HHHHHHHh------CcCceEEEEECHHHHHHHHHHHHCHHHhhheEEeccCCcc
Confidence 99999998 7889999999999999999999999999999999987653
No 10
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=99.94 E-value=4.6e-26 Score=179.88 Aligned_cols=122 Identities=15% Similarity=0.177 Sum_probs=105.7
Q ss_pred eeEeecCCcEEEEEEeecCCCCCcEEEEEEcCCCCCCcCchHHHHHHHHhcCCEEEEeecCCCCCCCCCCC------CcC
Q 026555 14 EFILNSRRVKLFTCSWIPQNQEPKALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSG------YID 87 (237)
Q Consensus 14 ~~~~~~~g~~l~~~~~~~~~~~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~------~~~ 87 (237)
..+...+|.+++|...++ +.++|||+||+++++..| ..+.+.|.+. |+|+++|+||||.|+.... ..+
T Consensus 10 ~~~~~~~~~~i~y~~~G~----~~~~vlllHG~~~~~~~w-~~~~~~L~~~-~~vi~~DlpG~G~S~~~~~~~~~~~~~~ 83 (294)
T PLN02824 10 TRTWRWKGYNIRYQRAGT----SGPALVLVHGFGGNADHW-RKNTPVLAKS-HRVYAIDLLGYGYSDKPNPRSAPPNSFY 83 (294)
T ss_pred CceEEEcCeEEEEEEcCC----CCCeEEEECCCCCChhHH-HHHHHHHHhC-CeEEEEcCCCCCCCCCCccccccccccC
Confidence 344566899999988743 246799999999999988 8999999887 8999999999999985431 247
Q ss_pred ChhhHHHHHHHHHHHHHhhhhcCCceEEEEEeccchHHHHHHHhcCCCcccEEEEcCCcc
Q 026555 88 NFDDLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMC 147 (237)
Q Consensus 88 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~~~~vl~~~~~ 147 (237)
+++++++|+.++++.+ ..++++++||||||++++.+|.++|++|+++|++++..
T Consensus 84 ~~~~~a~~l~~~l~~l------~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lili~~~~ 137 (294)
T PLN02824 84 TFETWGEQLNDFCSDV------VGDPAFVICNSVGGVVGLQAAVDAPELVRGVMLINISL 137 (294)
T ss_pred CHHHHHHHHHHHHHHh------cCCCeEEEEeCHHHHHHHHHHHhChhheeEEEEECCCc
Confidence 8999999999999988 78999999999999999999999999999999998765
No 11
>PRK00870 haloalkane dehalogenase; Provisional
Probab=99.94 E-value=4.5e-25 Score=174.82 Aligned_cols=115 Identities=18% Similarity=0.169 Sum_probs=99.9
Q ss_pred cEEEEEEeecCCCCCcEEEEEEcCCCCCCcCchHHHHHHHHhcCCEEEEeecCCCCCCCCCCC-CcCChhhHHHHHHHHH
Q 026555 22 VKLFTCSWIPQNQEPKALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSG-YIDNFDDLVDDCFNHF 100 (237)
Q Consensus 22 ~~l~~~~~~~~~~~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~-~~~~~~~~~~d~~~~~ 100 (237)
.+++|...++. ..|+|||+||++.+...| ..+++.|.+.||+|+++|+||||.|+.... ..++++++++|+.+++
T Consensus 34 ~~i~y~~~G~~---~~~~lvliHG~~~~~~~w-~~~~~~L~~~gy~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~~l~~~l 109 (302)
T PRK00870 34 LRMHYVDEGPA---DGPPVLLLHGEPSWSYLY-RKMIPILAAAGHRVIAPDLIGFGRSDKPTRREDYTYARHVEWMRSWF 109 (302)
T ss_pred EEEEEEecCCC---CCCEEEEECCCCCchhhH-HHHHHHHHhCCCEEEEECCCCCCCCCCCCCcccCCHHHHHHHHHHHH
Confidence 67888876432 246899999999998888 899999987899999999999999975432 2368899999999999
Q ss_pred HHHHhhhhcCCceEEEEEeccchHHHHHHHhcCCCcccEEEEcCCc
Q 026555 101 TSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPM 146 (237)
Q Consensus 101 ~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~~~~vl~~~~ 146 (237)
+.+ +.++++++||||||.+++.++.++|++++++|++++.
T Consensus 110 ~~l------~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 149 (302)
T PRK00870 110 EQL------DLTDVTLVCQDWGGLIGLRLAAEHPDRFARLVVANTG 149 (302)
T ss_pred HHc------CCCCEEEEEEChHHHHHHHHHHhChhheeEEEEeCCC
Confidence 988 7889999999999999999999999999999999875
No 12
>PRK03592 haloalkane dehalogenase; Provisional
Probab=99.93 E-value=9.9e-25 Score=172.35 Aligned_cols=117 Identities=17% Similarity=0.149 Sum_probs=103.7
Q ss_pred eecCCcEEEEEEeecCCCCCcEEEEEEcCCCCCCcCchHHHHHHHHhcCCEEEEeecCCCCCCCCCCCCcCChhhHHHHH
Q 026555 17 LNSRRVKLFTCSWIPQNQEPKALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDDLVDDC 96 (237)
Q Consensus 17 ~~~~g~~l~~~~~~~~~~~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~d~ 96 (237)
...+|.+++|..++ ..++|||+||++++...| +.+++.|.+. |+|+++|+||||.|+..... ++++.+++|+
T Consensus 12 ~~~~g~~i~y~~~G-----~g~~vvllHG~~~~~~~w-~~~~~~L~~~-~~via~D~~G~G~S~~~~~~-~~~~~~a~dl 83 (295)
T PRK03592 12 VEVLGSRMAYIETG-----EGDPIVFLHGNPTSSYLW-RNIIPHLAGL-GRCLAPDLIGMGASDKPDID-YTFADHARYL 83 (295)
T ss_pred EEECCEEEEEEEeC-----CCCEEEEECCCCCCHHHH-HHHHHHHhhC-CEEEEEcCCCCCCCCCCCCC-CCHHHHHHHH
Confidence 35589999999874 346799999999999888 8999999887 69999999999999865433 6899999999
Q ss_pred HHHHHHHHhhhhcCCceEEEEEeccchHHHHHHHhcCCCcccEEEEcCCcc
Q 026555 97 FNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMC 147 (237)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~~~~vl~~~~~ 147 (237)
.++++.+ +.++++++||||||.+++.++.++|++++++|++++..
T Consensus 84 ~~ll~~l------~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~ 128 (295)
T PRK03592 84 DAWFDAL------GLDDVVLVGHDWGSALGFDWAARHPDRVRGIAFMEAIV 128 (295)
T ss_pred HHHHHHh------CCCCeEEEEECHHHHHHHHHHHhChhheeEEEEECCCC
Confidence 9999998 77899999999999999999999999999999999754
No 13
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=99.92 E-value=5e-24 Score=163.01 Aligned_cols=128 Identities=20% Similarity=0.237 Sum_probs=114.3
Q ss_pred ccceeEeecCCcEEEEEEeecCCCCCcEEEEEEcCCCCCCcCchHHHHHHHHhcCCEEEEeecCCCCCCCCCCC-CcCCh
Q 026555 11 YDEEFILNSRRVKLFTCSWIPQNQEPKALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSG-YIDNF 89 (237)
Q Consensus 11 ~~~~~~~~~~g~~l~~~~~~~~~~~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~-~~~~~ 89 (237)
.-+..+.+.+|.+++|..-++. ..|+|+++||++.+...| +.....|+..||+|+++|+||+|.|+.+.. ..+++
T Consensus 21 ~~~hk~~~~~gI~~h~~e~g~~---~gP~illlHGfPe~wysw-r~q~~~la~~~~rviA~DlrGyG~Sd~P~~~~~Yt~ 96 (322)
T KOG4178|consen 21 AISHKFVTYKGIRLHYVEGGPG---DGPIVLLLHGFPESWYSW-RHQIPGLASRGYRVIAPDLRGYGFSDAPPHISEYTI 96 (322)
T ss_pred hcceeeEEEccEEEEEEeecCC---CCCEEEEEccCCccchhh-hhhhhhhhhcceEEEecCCCCCCCCCCCCCcceeeH
Confidence 3345666778888888877554 478999999999999988 999999999999999999999999997655 56899
Q ss_pred hhHHHHHHHHHHHHHhhhhcCCceEEEEEeccchHHHHHHHhcCCCcccEEEEcCCccc
Q 026555 90 DDLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCK 148 (237)
Q Consensus 90 ~~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~~~~vl~~~~~~ 148 (237)
..++.|+..+++.+ +.++++++||++|+.+|..++..+|++|+++|+++.+..
T Consensus 97 ~~l~~di~~lld~L------g~~k~~lvgHDwGaivaw~la~~~Perv~~lv~~nv~~~ 149 (322)
T KOG4178|consen 97 DELVGDIVALLDHL------GLKKAFLVGHDWGAIVAWRLALFYPERVDGLVTLNVPFP 149 (322)
T ss_pred HHHHHHHHHHHHHh------ccceeEEEeccchhHHHHHHHHhChhhcceEEEecCCCC
Confidence 99999999999999 899999999999999999999999999999999987766
No 14
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=99.92 E-value=4e-24 Score=176.15 Aligned_cols=127 Identities=19% Similarity=0.276 Sum_probs=104.9
Q ss_pred EeecCCcEEEEEEeecCCCCCcEEEEEEcCCCCCCcCchHH-HHHHHH---hcCCEEEEeecCCCCCCCCCCCCcCChhh
Q 026555 16 ILNSRRVKLFTCSWIPQNQEPKALIFICHGYAMECSIGMNS-TAIRLA---NEGYACYGIDYQGHGKSAGLSGYIDNFDD 91 (237)
Q Consensus 16 ~~~~~g~~l~~~~~~~~~~~~~~~iv~~hG~~~~~~~~~~~-~~~~l~---~~g~~v~~~d~~g~G~s~~~~~~~~~~~~ 91 (237)
+.+.+|.+++|...+|.+++.+++|||+||++++...| .. +.+.|. +.+|+|+++|+||||.|+......+++++
T Consensus 180 ~~~~~~~~l~~~~~gp~~~~~k~~VVLlHG~~~s~~~W-~~~~~~~L~~~~~~~yrVia~Dl~G~G~S~~p~~~~ytl~~ 258 (481)
T PLN03087 180 WLSSSNESLFVHVQQPKDNKAKEDVLFIHGFISSSAFW-TETLFPNFSDAAKSTYRLFAVDLLGFGRSPKPADSLYTLRE 258 (481)
T ss_pred eEeeCCeEEEEEEecCCCCCCCCeEEEECCCCccHHHH-HHHHHHHHHHHhhCCCEEEEECCCCCCCCcCCCCCcCCHHH
Confidence 34456689999999887544568999999999998877 53 446665 35899999999999999865444478889
Q ss_pred HHHHHH-HHHHHHHhhhhcCCceEEEEEeccchHHHHHHHhcCCCcccEEEEcCCcccc
Q 026555 92 LVDDCF-NHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKI 149 (237)
Q Consensus 92 ~~~d~~-~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~~~~vl~~~~~~~ 149 (237)
+++++. .+++.+ +.++++++||||||.+++.+|.++|++++++|++++....
T Consensus 259 ~a~~l~~~ll~~l------g~~k~~LVGhSmGG~iAl~~A~~~Pe~V~~LVLi~~~~~~ 311 (481)
T PLN03087 259 HLEMIERSVLERY------KVKSFHIVAHSLGCILALALAVKHPGAVKSLTLLAPPYYP 311 (481)
T ss_pred HHHHHHHHHHHHc------CCCCEEEEEECHHHHHHHHHHHhChHhccEEEEECCCccc
Confidence 998884 777777 7889999999999999999999999999999999876543
No 15
>PRK10673 acyl-CoA esterase; Provisional
Probab=99.91 E-value=1.5e-23 Score=162.17 Aligned_cols=114 Identities=24% Similarity=0.279 Sum_probs=99.1
Q ss_pred EEEEEEeecCCCCCcEEEEEEcCCCCCCcCchHHHHHHHHhcCCEEEEeecCCCCCCCCCCCCcCChhhHHHHHHHHHHH
Q 026555 23 KLFTCSWIPQNQEPKALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTS 102 (237)
Q Consensus 23 ~l~~~~~~~~~~~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~d~~~~~~~ 102 (237)
++.|+.+.+.+.+.+|+||++||++++...| ..++..|.+ +|+|+++|+||||.|..... .+++++++|+.++++.
T Consensus 2 ~~~~~~~~~~~~~~~~~iv~lhG~~~~~~~~-~~~~~~l~~-~~~vi~~D~~G~G~s~~~~~--~~~~~~~~d~~~~l~~ 77 (255)
T PRK10673 2 KLNIRAQTAQNPHNNSPIVLVHGLFGSLDNL-GVLARDLVN-DHDIIQVDMRNHGLSPRDPV--MNYPAMAQDLLDTLDA 77 (255)
T ss_pred cceeeeccCCCCCCCCCEEEECCCCCchhHH-HHHHHHHhh-CCeEEEECCCCCCCCCCCCC--CCHHHHHHHHHHHHHH
Confidence 4567777666545678999999999998877 889999976 59999999999999985433 5889999999999998
Q ss_pred HHhhhhcCCceEEEEEeccchHHHHHHHhcCCCcccEEEEcCCc
Q 026555 103 ICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPM 146 (237)
Q Consensus 103 ~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~~~~vl~~~~ 146 (237)
+ +.++++++||||||.+++.+|.++|++|+++|++++.
T Consensus 78 l------~~~~~~lvGhS~Gg~va~~~a~~~~~~v~~lvli~~~ 115 (255)
T PRK10673 78 L------QIEKATFIGHSMGGKAVMALTALAPDRIDKLVAIDIA 115 (255)
T ss_pred c------CCCceEEEEECHHHHHHHHHHHhCHhhcceEEEEecC
Confidence 8 7788999999999999999999999999999998654
No 16
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=99.91 E-value=2e-23 Score=168.97 Aligned_cols=125 Identities=17% Similarity=0.242 Sum_probs=103.6
Q ss_pred EeecCCc-EEEEEEeecCC-CCCcEEEEEEcCCCCCCcCchHHHHHHHHhcCCEEEEeecCCCCCCCCCCCCcCChhhHH
Q 026555 16 ILNSRRV-KLFTCSWIPQN-QEPKALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDDLV 93 (237)
Q Consensus 16 ~~~~~g~-~l~~~~~~~~~-~~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~ 93 (237)
....+|. +++|...++.. ....|+|||+||++.+...| ..+.+.|.+ +|+|+++|+||||.|+......+++++++
T Consensus 65 ~~~~~g~~~i~Y~~~G~g~~~~~gp~lvllHG~~~~~~~w-~~~~~~L~~-~~~via~Dl~G~G~S~~~~~~~~~~~~~a 142 (360)
T PLN02679 65 KWKWKGEYSINYLVKGSPEVTSSGPPVLLVHGFGASIPHW-RRNIGVLAK-NYTVYAIDLLGFGASDKPPGFSYTMETWA 142 (360)
T ss_pred eEEECCceeEEEEEecCcccCCCCCeEEEECCCCCCHHHH-HHHHHHHhc-CCEEEEECCCCCCCCCCCCCccccHHHHH
Confidence 3445676 99998886531 01347899999999999888 888899976 69999999999999986544346889999
Q ss_pred HHHHHHHHHHHhhhhcCCceEEEEEeccchHHHHHHHh-cCCCcccEEEEcCCccc
Q 026555 94 DDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHR-KKPDYFDGAVLVAPMCK 148 (237)
Q Consensus 94 ~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~-~~p~~~~~~vl~~~~~~ 148 (237)
+++.++++.+ +.++++++||||||.+++.++. .+|++|+++|++++...
T Consensus 143 ~~l~~~l~~l------~~~~~~lvGhS~Gg~ia~~~a~~~~P~rV~~LVLi~~~~~ 192 (360)
T PLN02679 143 ELILDFLEEV------VQKPTVLIGNSVGSLACVIAASESTRDLVRGLVLLNCAGG 192 (360)
T ss_pred HHHHHHHHHh------cCCCeEEEEECHHHHHHHHHHHhcChhhcCEEEEECCccc
Confidence 9999999988 7789999999999999999887 47999999999997653
No 17
>PRK03204 haloalkane dehalogenase; Provisional
Probab=99.91 E-value=2.6e-23 Score=163.40 Aligned_cols=125 Identities=18% Similarity=0.304 Sum_probs=102.9
Q ss_pred ccccceeEeecCCcEEEEEEeecCCCCCcEEEEEEcCCCCCCcCchHHHHHHHHhcCCEEEEeecCCCCCCCCCCCCcCC
Q 026555 9 IKYDEEFILNSRRVKLFTCSWIPQNQEPKALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDN 88 (237)
Q Consensus 9 ~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~ 88 (237)
++++..+ ...+|.+++|...+ .+++|||+||++.+...| ..+.+.|.+ +|+|+++|+||||.|+......++
T Consensus 12 ~~~~~~~-~~~~~~~i~y~~~G-----~~~~iv~lHG~~~~~~~~-~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~~ 83 (286)
T PRK03204 12 YPFESRW-FDSSRGRIHYIDEG-----TGPPILLCHGNPTWSFLY-RDIIVALRD-RFRCVAPDYLGFGLSERPSGFGYQ 83 (286)
T ss_pred ccccceE-EEcCCcEEEEEECC-----CCCEEEEECCCCccHHHH-HHHHHHHhC-CcEEEEECCCCCCCCCCCCccccC
Confidence 3444444 45578899988763 346799999999877767 888899976 499999999999999865433357
Q ss_pred hhhHHHHHHHHHHHHHhhhhcCCceEEEEEeccchHHHHHHHhcCCCcccEEEEcCCcc
Q 026555 89 FDDLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMC 147 (237)
Q Consensus 89 ~~~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~~~~vl~~~~~ 147 (237)
.+++++++.++++.+ +.++++++||||||.+++.++..+|++++++|++++..
T Consensus 84 ~~~~~~~~~~~~~~~------~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~ 136 (286)
T PRK03204 84 IDEHARVIGEFVDHL------GLDRYLSMGQDWGGPISMAVAVERADRVRGVVLGNTWF 136 (286)
T ss_pred HHHHHHHHHHHHHHh------CCCCEEEEEECccHHHHHHHHHhChhheeEEEEECccc
Confidence 788888898888887 78899999999999999999999999999999987654
No 18
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=99.91 E-value=7.4e-23 Score=165.46 Aligned_cols=131 Identities=15% Similarity=0.194 Sum_probs=112.4
Q ss_pred cCccccceeEeecCCcEEEEEEeecCCCCCcEEEEEEcCCCCCCcCchHHHHHHHHhcCCEEEEeecCCCCCCCCCCC--
Q 026555 7 HNIKYDEEFILNSRRVKLFTCSWIPQNQEPKALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSG-- 84 (237)
Q Consensus 7 ~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~-- 84 (237)
.++.+........+|.+++|...++. .+++|||+||++.+...| +.+++.|.+ +|+|+++|+||||.|+....
T Consensus 100 ~~~~~~~~~~~~~~~~~~~y~~~G~~---~~~~ivllHG~~~~~~~w-~~~~~~L~~-~~~Via~DlpG~G~S~~p~~~~ 174 (383)
T PLN03084 100 FGLKMGAQSQASSDLFRWFCVESGSN---NNPPVLLIHGFPSQAYSY-RKVLPVLSK-NYHAIAFDWLGFGFSDKPQPGY 174 (383)
T ss_pred ccccccceeEEcCCceEEEEEecCCC---CCCeEEEECCCCCCHHHH-HHHHHHHhc-CCEEEEECCCCCCCCCCCcccc
Confidence 34556666677889999999987653 256899999999999888 899999976 69999999999999986533
Q ss_pred -CcCChhhHHHHHHHHHHHHHhhhhcCCceEEEEEeccchHHHHHHHhcCCCcccEEEEcCCccc
Q 026555 85 -YIDNFDDLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCK 148 (237)
Q Consensus 85 -~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~~~~vl~~~~~~ 148 (237)
..++++++++++.++++.+ ..++++++|||+||.+++.++.++|++++++|++++...
T Consensus 175 ~~~ys~~~~a~~l~~~i~~l------~~~~~~LvG~s~GG~ia~~~a~~~P~~v~~lILi~~~~~ 233 (383)
T PLN03084 175 GFNYTLDEYVSSLESLIDEL------KSDKVSLVVQGYFSPPVVKYASAHPDKIKKLILLNPPLT 233 (383)
T ss_pred cccCCHHHHHHHHHHHHHHh------CCCCceEEEECHHHHHHHHHHHhChHhhcEEEEECCCCc
Confidence 2368999999999999998 788999999999999999999999999999999998754
No 19
>PRK06489 hypothetical protein; Provisional
Probab=99.91 E-value=7.4e-23 Score=165.81 Aligned_cols=133 Identities=22% Similarity=0.235 Sum_probs=98.9
Q ss_pred ccccceeEee---cCCcEEEEEEeecCCC----CCcEEEEEEcCCCCCCcCchH-HHHHHH-------HhcCCEEEEeec
Q 026555 9 IKYDEEFILN---SRRVKLFTCSWIPQNQ----EPKALIFICHGYAMECSIGMN-STAIRL-------ANEGYACYGIDY 73 (237)
Q Consensus 9 ~~~~~~~~~~---~~g~~l~~~~~~~~~~----~~~~~iv~~hG~~~~~~~~~~-~~~~~l-------~~~g~~v~~~d~ 73 (237)
+..+...+.. .+|.+++|..++.... +..|+|||+||++++...|.. .+.+.| ...+|+|+++|+
T Consensus 34 ~~~~~~~~~~~~~~~g~~i~y~~~G~~~~~~~~~~gpplvllHG~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~Via~Dl 113 (360)
T PRK06489 34 WVARDFTFHSGETLPELRLHYTTLGTPHRNADGEIDNAVLVLHGTGGSGKSFLSPTFAGELFGPGQPLDASKYFIILPDG 113 (360)
T ss_pred eeccceeccCCCCcCCceEEEEecCCCCcccccCCCCeEEEeCCCCCchhhhccchhHHHhcCCCCcccccCCEEEEeCC
Confidence 3444444444 5788999998854210 115789999999998876631 454444 134699999999
Q ss_pred CCCCCCCCCCCC------cCChhhHHHHHHHHH-HHHHhhhhcCCceEE-EEEeccchHHHHHHHhcCCCcccEEEEcCC
Q 026555 74 QGHGKSAGLSGY------IDNFDDLVDDCFNHF-TSICEKEENKEKMRY-LLGESMGGAMVLLLHRKKPDYFDGAVLVAP 145 (237)
Q Consensus 74 ~g~G~s~~~~~~------~~~~~~~~~d~~~~~-~~~~~~~~~~~~~~~-l~G~S~Gg~~a~~~a~~~p~~~~~~vl~~~ 145 (237)
||||.|+..... .++++++++++.+++ +.+ +.++++ ++||||||++++.+|.++|++|+++|++++
T Consensus 114 ~GhG~S~~p~~~~~~~~~~~~~~~~a~~~~~~l~~~l------gi~~~~~lvG~SmGG~vAl~~A~~~P~~V~~LVLi~s 187 (360)
T PRK06489 114 IGHGKSSKPSDGLRAAFPRYDYDDMVEAQYRLVTEGL------GVKHLRLILGTSMGGMHAWMWGEKYPDFMDALMPMAS 187 (360)
T ss_pred CCCCCCCCCCcCCCCCCCcccHHHHHHHHHHHHHHhc------CCCceeEEEEECHHHHHHHHHHHhCchhhheeeeecc
Confidence 999999754321 257788888877754 656 777875 899999999999999999999999999987
Q ss_pred cc
Q 026555 146 MC 147 (237)
Q Consensus 146 ~~ 147 (237)
..
T Consensus 188 ~~ 189 (360)
T PRK06489 188 QP 189 (360)
T ss_pred Cc
Confidence 54
No 20
>PLN02965 Probable pheophorbidase
Probab=99.91 E-value=1.6e-23 Score=162.09 Aligned_cols=103 Identities=22% Similarity=0.220 Sum_probs=91.6
Q ss_pred EEEEEEcCCCCCCcCchHHHHHHHHhcCCEEEEeecCCCCCCCCCCCCcCChhhHHHHHHHHHHHHHhhhhcCC-ceEEE
Q 026555 38 ALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEKEENKE-KMRYL 116 (237)
Q Consensus 38 ~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~-~~~~l 116 (237)
-.|||+||++.+...| ..+.+.|.+.||+|+++|+||||.|.......++++++++|+.++++.+ +. +++++
T Consensus 4 ~~vvllHG~~~~~~~w-~~~~~~L~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l------~~~~~~~l 76 (255)
T PLN02965 4 IHFVFVHGASHGAWCW-YKLATLLDAAGFKSTCVDLTGAGISLTDSNTVSSSDQYNRPLFALLSDL------PPDHKVIL 76 (255)
T ss_pred eEEEEECCCCCCcCcH-HHHHHHHhhCCceEEEecCCcCCCCCCCccccCCHHHHHHHHHHHHHhc------CCCCCEEE
Confidence 3599999999998878 8999999887899999999999999755433468899999999999988 65 59999
Q ss_pred EEeccchHHHHHHHhcCCCcccEEEEcCCcc
Q 026555 117 LGESMGGAMVLLLHRKKPDYFDGAVLVAPMC 147 (237)
Q Consensus 117 ~G~S~Gg~~a~~~a~~~p~~~~~~vl~~~~~ 147 (237)
+||||||.+++.++.++|++|+++|++++..
T Consensus 77 vGhSmGG~ia~~~a~~~p~~v~~lvl~~~~~ 107 (255)
T PLN02965 77 VGHSIGGGSVTEALCKFTDKISMAIYVAAAM 107 (255)
T ss_pred EecCcchHHHHHHHHhCchheeEEEEEcccc
Confidence 9999999999999999999999999998763
No 21
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.90 E-value=2.9e-23 Score=160.12 Aligned_cols=117 Identities=16% Similarity=0.216 Sum_probs=99.7
Q ss_pred EEEEEeecCCCCCcEEEEEEcCCCCCCcCchHHHHHHHHhcCCEEEEeecCCCCCCCCCCCCcCChhhHHHHHHHHHHHH
Q 026555 24 LFTCSWIPQNQEPKALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSI 103 (237)
Q Consensus 24 l~~~~~~~~~~~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~d~~~~~~~~ 103 (237)
++|..+++.+ ...|+||++||++++...| ..+.+.|.+ +|+|+++|+||||.|.......++++++++++.++++.+
T Consensus 1 ~~~~~~~~~~-~~~~~iv~lhG~~~~~~~~-~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~i~~~ 77 (257)
T TIGR03611 1 MHYELHGPPD-ADAPVVVLSSGLGGSGSYW-APQLDVLTQ-RFHVVTYDHRGTGRSPGELPPGYSIAHMADDVLQLLDAL 77 (257)
T ss_pred CEEEEecCCC-CCCCEEEEEcCCCcchhHH-HHHHHHHHh-ccEEEEEcCCCCCCCCCCCcccCCHHHHHHHHHHHHHHh
Confidence 3577776543 4467899999999998877 788888865 699999999999999865555578999999999999888
Q ss_pred HhhhhcCCceEEEEEeccchHHHHHHHhcCCCcccEEEEcCCcccc
Q 026555 104 CEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKI 149 (237)
Q Consensus 104 ~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~~~~vl~~~~~~~ 149 (237)
+.++++++||||||.+++.++.++|+.++++|++++....
T Consensus 78 ------~~~~~~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~ 117 (257)
T TIGR03611 78 ------NIERFHFVGHALGGLIGLQLALRYPERLLSLVLINAWSRP 117 (257)
T ss_pred ------CCCcEEEEEechhHHHHHHHHHHChHHhHHheeecCCCCC
Confidence 7789999999999999999999999999999999876543
No 22
>PLN02578 hydrolase
Probab=99.90 E-value=9.5e-23 Score=164.75 Aligned_cols=120 Identities=19% Similarity=0.180 Sum_probs=101.6
Q ss_pred eEeecCCcEEEEEEeecCCCCCcEEEEEEcCCCCCCcCchHHHHHHHHhcCCEEEEeecCCCCCCCCCCCCcCChhhHHH
Q 026555 15 FILNSRRVKLFTCSWIPQNQEPKALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDDLVD 94 (237)
Q Consensus 15 ~~~~~~g~~l~~~~~~~~~~~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~ 94 (237)
.+.+.+|.+++|...+ .+++|||+||++++...| ..+.+.|.+ +|+|+++|+||||.|++.... ++.+.+++
T Consensus 69 ~~~~~~~~~i~Y~~~g-----~g~~vvliHG~~~~~~~w-~~~~~~l~~-~~~v~~~D~~G~G~S~~~~~~-~~~~~~a~ 140 (354)
T PLN02578 69 NFWTWRGHKIHYVVQG-----EGLPIVLIHGFGASAFHW-RYNIPELAK-KYKVYALDLLGFGWSDKALIE-YDAMVWRD 140 (354)
T ss_pred eEEEECCEEEEEEEcC-----CCCeEEEECCCCCCHHHH-HHHHHHHhc-CCEEEEECCCCCCCCCCcccc-cCHHHHHH
Confidence 3445678889988653 245699999999998877 888889976 599999999999999865433 68888899
Q ss_pred HHHHHHHHHHhhhhcCCceEEEEEeccchHHHHHHHhcCCCcccEEEEcCCccc
Q 026555 95 DCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCK 148 (237)
Q Consensus 95 d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~~~~vl~~~~~~ 148 (237)
|+.++++.+ ..++++++|||+||.+++.+|.++|++++++|++++...
T Consensus 141 ~l~~~i~~~------~~~~~~lvG~S~Gg~ia~~~A~~~p~~v~~lvLv~~~~~ 188 (354)
T PLN02578 141 QVADFVKEV------VKEPAVLVGNSLGGFTALSTAVGYPELVAGVALLNSAGQ 188 (354)
T ss_pred HHHHHHHHh------ccCCeEEEEECHHHHHHHHHHHhChHhcceEEEECCCcc
Confidence 999999988 678999999999999999999999999999999987654
No 23
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=99.90 E-value=1.5e-22 Score=158.27 Aligned_cols=125 Identities=15% Similarity=0.102 Sum_probs=106.4
Q ss_pred ceeEeecCCcEEEEEEeecCCCCCcEEEEEEcCCCCCCcCchHHHHHHHHhcCCEEEEeecCCCCCCCCCCCCcCChhhH
Q 026555 13 EEFILNSRRVKLFTCSWIPQNQEPKALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDDL 92 (237)
Q Consensus 13 ~~~~~~~~g~~l~~~~~~~~~~~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~ 92 (237)
...+...+|.+++|...++. ..++||++||++++...| ..+.+.|.+ +|+|+++|+||||.|.......++++++
T Consensus 7 ~~~~~~~~~~~~~~~~~g~~---~~~~vv~~hG~~~~~~~~-~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~ 81 (278)
T TIGR03056 7 CSRRVTVGPFHWHVQDMGPT---AGPLLLLLHGTGASTHSW-RDLMPPLAR-SFRVVAPDLPGHGFTRAPFRFRFTLPSM 81 (278)
T ss_pred ccceeeECCEEEEEEecCCC---CCCeEEEEcCCCCCHHHH-HHHHHHHhh-CcEEEeecCCCCCCCCCccccCCCHHHH
Confidence 34555779999999887543 247899999999998877 888999976 5999999999999998655434689999
Q ss_pred HHHHHHHHHHHHhhhhcCCceEEEEEeccchHHHHHHHhcCCCcccEEEEcCCccc
Q 026555 93 VDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCK 148 (237)
Q Consensus 93 ~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~~~~vl~~~~~~ 148 (237)
++|+.++++.+ +.++++++||||||.+++.++.++|++++++|++++...
T Consensus 82 ~~~l~~~i~~~------~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~ 131 (278)
T TIGR03056 82 AEDLSALCAAE------GLSPDGVIGHSAGAAIALRLALDGPVTPRMVVGINAALM 131 (278)
T ss_pred HHHHHHHHHHc------CCCCceEEEECccHHHHHHHHHhCCcccceEEEEcCccc
Confidence 99999999877 678899999999999999999999999999999987654
No 24
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=99.90 E-value=8.4e-23 Score=160.25 Aligned_cols=122 Identities=17% Similarity=0.139 Sum_probs=92.9
Q ss_pred eeEeecCC---cEEEEEEeecCCCCCcEEEEEEcCCCCCCcCchHH---HHHHHHhcCCEEEEeecCCCCCCCCCCCCcC
Q 026555 14 EFILNSRR---VKLFTCSWIPQNQEPKALIFICHGYAMECSIGMNS---TAIRLANEGYACYGIDYQGHGKSAGLSGYID 87 (237)
Q Consensus 14 ~~~~~~~g---~~l~~~~~~~~~~~~~~~iv~~hG~~~~~~~~~~~---~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~ 87 (237)
...++.+| .+++|... +..++|||+||++.+...| .. ....+.+.||+|+++|+||||.|+.......
T Consensus 9 ~~~~~~~~~~~~~~~y~~~-----g~~~~ivllHG~~~~~~~~-~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~ 82 (282)
T TIGR03343 9 FVKINEKGLSNFRIHYNEA-----GNGEAVIMLHGGGPGAGGW-SNYYRNIGPFVDAGYRVILKDSPGFNKSDAVVMDEQ 82 (282)
T ss_pred EEEcccccccceeEEEEec-----CCCCeEEEECCCCCchhhH-HHHHHHHHHHHhCCCEEEEECCCCCCCCCCCcCccc
Confidence 33444443 55777754 2346799999999887766 43 2445666789999999999999985432211
Q ss_pred ChhhHHHHHHHHHHHHHhhhhcCCceEEEEEeccchHHHHHHHhcCCCcccEEEEcCCcc
Q 026555 88 NFDDLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMC 147 (237)
Q Consensus 88 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~~~~vl~~~~~ 147 (237)
.....++|+.++++.+ +.++++++||||||.+++.++.++|++++++|++++..
T Consensus 83 ~~~~~~~~l~~~l~~l------~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 136 (282)
T TIGR03343 83 RGLVNARAVKGLMDAL------DIEKAHLVGNSMGGATALNFALEYPDRIGKLILMGPGG 136 (282)
T ss_pred ccchhHHHHHHHHHHc------CCCCeeEEEECchHHHHHHHHHhChHhhceEEEECCCC
Confidence 1124578888888888 88899999999999999999999999999999998763
No 25
>PLN02511 hydrolase
Probab=99.90 E-value=4.3e-22 Score=162.35 Aligned_cols=140 Identities=11% Similarity=0.093 Sum_probs=108.3
Q ss_pred cCccccceeEeecCCcEEEEEEeecC---CCCCcEEEEEEcCCCCCCcC-chHHHHHHHHhcCCEEEEeecCCCCCCCCC
Q 026555 7 HNIKYDEEFILNSRRVKLFTCSWIPQ---NQEPKALIFICHGYAMECSI-GMNSTAIRLANEGYACYGIDYQGHGKSAGL 82 (237)
Q Consensus 7 ~~~~~~~~~~~~~~g~~l~~~~~~~~---~~~~~~~iv~~hG~~~~~~~-~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~ 82 (237)
..+.++.+.+.+.||..+.+..+.+. ....+|+||++||+++++.. |+..++..+.+.||+|+++|+||||.|...
T Consensus 67 ~~~~~~re~l~~~DG~~~~ldw~~~~~~~~~~~~p~vvllHG~~g~s~~~y~~~~~~~~~~~g~~vv~~d~rG~G~s~~~ 146 (388)
T PLN02511 67 PAVRYRRECLRTPDGGAVALDWVSGDDRALPADAPVLILLPGLTGGSDDSYVRHMLLRARSKGWRVVVFNSRGCADSPVT 146 (388)
T ss_pred CCCceeEEEEECCCCCEEEEEecCcccccCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEecCCCCCCCCC
Confidence 34566778888999988887544321 12447899999999776653 656777777788999999999999999754
Q ss_pred CCCcCChhhHHHHHHHHHHHHHhhhhcCCceEEEEEeccchHHHHHHHhcCCCc--ccEEEEcCCcccc
Q 026555 83 SGYIDNFDDLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDY--FDGAVLVAPMCKI 149 (237)
Q Consensus 83 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~--~~~~vl~~~~~~~ 149 (237)
... ......++|+.++++++ .......+++++||||||++++.++.++|+. +.++++++++.+.
T Consensus 147 ~~~-~~~~~~~~Dl~~~i~~l--~~~~~~~~~~lvG~SlGg~i~~~yl~~~~~~~~v~~~v~is~p~~l 212 (388)
T PLN02511 147 TPQ-FYSASFTGDLRQVVDHV--AGRYPSANLYAAGWSLGANILVNYLGEEGENCPLSGAVSLCNPFDL 212 (388)
T ss_pred CcC-EEcCCchHHHHHHHHHH--HHHCCCCCEEEEEechhHHHHHHHHHhcCCCCCceEEEEECCCcCH
Confidence 332 22357788999999999 4444557899999999999999999999987 8888888776654
No 26
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.89 E-value=2.6e-22 Score=157.11 Aligned_cols=125 Identities=18% Similarity=0.123 Sum_probs=100.6
Q ss_pred EeecCCcEEEEEEeecCCCCCcEEEEEEcCCCCCCcCchHHHHHHHHhcCCEEEEeecCCCCCCCCCCCC--cCChhhHH
Q 026555 16 ILNSRRVKLFTCSWIPQNQEPKALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSGY--IDNFDDLV 93 (237)
Q Consensus 16 ~~~~~g~~l~~~~~~~~~~~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~--~~~~~~~~ 93 (237)
+.+.+|.++.|....+. +.+++||++||++++...|+..+...+.+.||+|+++|+||||.|...... .+++++++
T Consensus 6 ~~~~~~~~~~~~~~~~~--~~~~~vl~~hG~~g~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~ 83 (288)
T TIGR01250 6 IITVDGGYHLFTKTGGE--GEKIKLLLLHGGPGMSHEYLENLRELLKEEGREVIMYDQLGCGYSDQPDDSDELWTIDYFV 83 (288)
T ss_pred eecCCCCeEEEEeccCC--CCCCeEEEEcCCCCccHHHHHHHHHHHHhcCCEEEEEcCCCCCCCCCCCcccccccHHHHH
Confidence 44566777888776543 335789999998766655657777777766899999999999999854322 26788999
Q ss_pred HHHHHHHHHHHhhhhcCCceEEEEEeccchHHHHHHHhcCCCcccEEEEcCCccc
Q 026555 94 DDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCK 148 (237)
Q Consensus 94 ~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~~~~vl~~~~~~ 148 (237)
+|+.++++.+ +.++++++||||||.+++.++.++|++++++|++++...
T Consensus 84 ~~~~~~~~~~------~~~~~~liG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 132 (288)
T TIGR01250 84 DELEEVREKL------GLDKFYLLGHSWGGMLAQEYALKYGQHLKGLIISSMLDS 132 (288)
T ss_pred HHHHHHHHHc------CCCcEEEEEeehHHHHHHHHHHhCccccceeeEeccccc
Confidence 9999988887 677899999999999999999999999999999987653
No 27
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.89 E-value=3.8e-23 Score=158.70 Aligned_cols=102 Identities=22% Similarity=0.229 Sum_probs=88.9
Q ss_pred cEEEEEEcCCCCCCcCchHHHHHHHHhcCCEEEEeecCCCCCCCCCCCCcCChhhHHHHHHHHHHHHHhhhhcCCceEEE
Q 026555 37 KALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEKEENKEKMRYL 116 (237)
Q Consensus 37 ~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l 116 (237)
+|+|||+||++++...| ..+.+.| + +|+|+++|+||||.|..... .+++++++|+.++++.+ +.+++++
T Consensus 2 ~p~vvllHG~~~~~~~w-~~~~~~l-~-~~~vi~~D~~G~G~S~~~~~--~~~~~~~~~l~~~l~~~------~~~~~~l 70 (242)
T PRK11126 2 LPWLVFLHGLLGSGQDW-QPVGEAL-P-DYPRLYIDLPGHGGSAAISV--DGFADVSRLLSQTLQSY------NILPYWL 70 (242)
T ss_pred CCEEEEECCCCCChHHH-HHHHHHc-C-CCCEEEecCCCCCCCCCccc--cCHHHHHHHHHHHHHHc------CCCCeEE
Confidence 46799999999999988 8998888 4 59999999999999985433 48889999999999887 7899999
Q ss_pred EEeccchHHHHHHHhcCCCc-ccEEEEcCCcccc
Q 026555 117 LGESMGGAMVLLLHRKKPDY-FDGAVLVAPMCKI 149 (237)
Q Consensus 117 ~G~S~Gg~~a~~~a~~~p~~-~~~~vl~~~~~~~ 149 (237)
+||||||.+++.+|.++|+. +++++++++....
T Consensus 71 vG~S~Gg~va~~~a~~~~~~~v~~lvl~~~~~~~ 104 (242)
T PRK11126 71 VGYSLGGRIAMYYACQGLAGGLCGLIVEGGNPGL 104 (242)
T ss_pred EEECHHHHHHHHHHHhCCcccccEEEEeCCCCCC
Confidence 99999999999999999765 9999998876543
No 28
>PRK10349 carboxylesterase BioH; Provisional
Probab=99.89 E-value=4.7e-23 Score=159.57 Aligned_cols=98 Identities=18% Similarity=0.327 Sum_probs=81.4
Q ss_pred EEEEEEcCCCCCCcCchHHHHHHHHhcCCEEEEeecCCCCCCCCCCCCcCChhhHHHHHHHHHHHHHhhhhcCCceEEEE
Q 026555 38 ALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEKEENKEKMRYLL 117 (237)
Q Consensus 38 ~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~ 117 (237)
|+|||+||+++++..| ..+.+.|.++ |+|+++|+||||.|+... .++++++++++.+ + ..++++++
T Consensus 14 ~~ivllHG~~~~~~~w-~~~~~~L~~~-~~vi~~Dl~G~G~S~~~~--~~~~~~~~~~l~~----~------~~~~~~lv 79 (256)
T PRK10349 14 VHLVLLHGWGLNAEVW-RCIDEELSSH-FTLHLVDLPGFGRSRGFG--ALSLADMAEAVLQ----Q------APDKAIWL 79 (256)
T ss_pred CeEEEECCCCCChhHH-HHHHHHHhcC-CEEEEecCCCCCCCCCCC--CCCHHHHHHHHHh----c------CCCCeEEE
Confidence 4699999999999988 8999999775 999999999999997542 2456655555432 3 46899999
Q ss_pred EeccchHHHHHHHhcCCCcccEEEEcCCcccc
Q 026555 118 GESMGGAMVLLLHRKKPDYFDGAVLVAPMCKI 149 (237)
Q Consensus 118 G~S~Gg~~a~~~a~~~p~~~~~~vl~~~~~~~ 149 (237)
||||||.+++.+|.++|++++++|++++....
T Consensus 80 GhS~Gg~ia~~~a~~~p~~v~~lili~~~~~~ 111 (256)
T PRK10349 80 GWSLGGLVASQIALTHPERVQALVTVASSPCF 111 (256)
T ss_pred EECHHHHHHHHHHHhChHhhheEEEecCccce
Confidence 99999999999999999999999999875443
No 29
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.89 E-value=1e-22 Score=153.77 Aligned_cols=103 Identities=28% Similarity=0.439 Sum_probs=91.4
Q ss_pred EEEEcCCCCCCcCchHHHHHHHHhcCCEEEEeecCCCCCCCCCCC-CcCChhhHHHHHHHHHHHHHhhhhcCCceEEEEE
Q 026555 40 IFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSG-YIDNFDDLVDDCFNHFTSICEKEENKEKMRYLLG 118 (237)
Q Consensus 40 iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~-~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~G 118 (237)
|||+||++++...| ..+++.|+ +||+|+++|+||+|.|..... ...+++++++|+.++++.+ ..++++++|
T Consensus 1 vv~~hG~~~~~~~~-~~~~~~l~-~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~l~~~l~~~------~~~~~~lvG 72 (228)
T PF12697_consen 1 VVFLHGFGGSSESW-DPLAEALA-RGYRVIAFDLPGHGRSDPPPDYSPYSIEDYAEDLAELLDAL------GIKKVILVG 72 (228)
T ss_dssp EEEE-STTTTGGGG-HHHHHHHH-TTSEEEEEECTTSTTSSSHSSGSGGSHHHHHHHHHHHHHHT------TTSSEEEEE
T ss_pred eEEECCCCCCHHHH-HHHHHHHh-CCCEEEEEecCCccccccccccCCcchhhhhhhhhhccccc------ccccccccc
Confidence 79999999999877 89999995 689999999999999986543 2368899999999999988 668999999
Q ss_pred eccchHHHHHHHhcCCCcccEEEEcCCccccc
Q 026555 119 ESMGGAMVLLLHRKKPDYFDGAVLVAPMCKIA 150 (237)
Q Consensus 119 ~S~Gg~~a~~~a~~~p~~~~~~vl~~~~~~~~ 150 (237)
||+||.+++.++.++|++++++|++++.....
T Consensus 73 ~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~ 104 (228)
T PF12697_consen 73 HSMGGMIALRLAARYPDRVKGLVLLSPPPPLP 104 (228)
T ss_dssp ETHHHHHHHHHHHHSGGGEEEEEEESESSSHH
T ss_pred cccccccccccccccccccccceeeccccccc
Confidence 99999999999999999999999999888654
No 30
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.88 E-value=1.1e-21 Score=150.78 Aligned_cols=131 Identities=20% Similarity=0.216 Sum_probs=103.5
Q ss_pred eEeecCCcEEEEEEeecCCCCCcEEEEEEcCCCCCCcC---chHHHHHHHHhcCCEEEEeecCCCCCCCCCCCCcCChhh
Q 026555 15 FILNSRRVKLFTCSWIPQNQEPKALIFICHGYAMECSI---GMNSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDD 91 (237)
Q Consensus 15 ~~~~~~g~~l~~~~~~~~~~~~~~~iv~~hG~~~~~~~---~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~ 91 (237)
++....|. +.++.+.|...+++++||++||++.+... .+..+++.|++.||+|+.+|+||||.|.+.... .+++.
T Consensus 4 ~l~~~~g~-~~~~~~~p~~~~~~~~VlllHG~g~~~~~~~~~~~~la~~La~~Gy~Vl~~Dl~G~G~S~g~~~~-~~~~~ 81 (266)
T TIGR03101 4 FLDAPHGF-RFCLYHPPVAVGPRGVVIYLPPFAEEMNKSRRMVALQARAFAAGGFGVLQIDLYGCGDSAGDFAA-ARWDV 81 (266)
T ss_pred EecCCCCc-EEEEEecCCCCCCceEEEEECCCcccccchhHHHHHHHHHHHHCCCEEEEECCCCCCCCCCcccc-CCHHH
Confidence 44444444 55666666544567899999999875332 226678999999999999999999999765433 47788
Q ss_pred HHHHHHHHHHHHHhhhhcCCceEEEEEeccchHHHHHHHhcCCCcccEEEEcCCccccc
Q 026555 92 LVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKIA 150 (237)
Q Consensus 92 ~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~~~~vl~~~~~~~~ 150 (237)
+++|+.++++.+ +.. +..+++++||||||.+++.++.++|+.++++|+++|.....
T Consensus 82 ~~~Dv~~ai~~L--~~~-~~~~v~LvG~SmGG~vAl~~A~~~p~~v~~lVL~~P~~~g~ 137 (266)
T TIGR03101 82 WKEDVAAAYRWL--IEQ-GHPPVTLWGLRLGALLALDAANPLAAKCNRLVLWQPVVSGK 137 (266)
T ss_pred HHHHHHHHHHHH--Hhc-CCCCEEEEEECHHHHHHHHHHHhCccccceEEEeccccchH
Confidence 899999999888 333 46799999999999999999999999999999999876653
No 31
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.88 E-value=9.6e-23 Score=156.27 Aligned_cols=115 Identities=20% Similarity=0.270 Sum_probs=96.9
Q ss_pred EEEEEeecCCCCCcEEEEEEcCCCCCCcCchHHHHHHHHhcCCEEEEeecCCCCCCCCCCCCcCChhhHHHHHHHHHHHH
Q 026555 24 LFTCSWIPQNQEPKALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSI 103 (237)
Q Consensus 24 l~~~~~~~~~~~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~d~~~~~~~~ 103 (237)
++|..+++. +.+|+||++||++.+...| ..+.+.|. .||+|+++|+||||.|+.... .++++++++|+.++++.+
T Consensus 2 ~~~~~~g~~--~~~~~li~~hg~~~~~~~~-~~~~~~l~-~~~~v~~~d~~G~G~s~~~~~-~~~~~~~~~~~~~~i~~~ 76 (251)
T TIGR02427 2 LHYRLDGAA--DGAPVLVFINSLGTDLRMW-DPVLPALT-PDFRVLRYDKRGHGLSDAPEG-PYSIEDLADDVLALLDHL 76 (251)
T ss_pred ceEEeecCC--CCCCeEEEEcCcccchhhH-HHHHHHhh-cccEEEEecCCCCCCCCCCCC-CCCHHHHHHHHHHHHHHh
Confidence 566666443 3468899999999998877 88888886 479999999999999875433 368899999999999888
Q ss_pred HhhhhcCCceEEEEEeccchHHHHHHHhcCCCcccEEEEcCCcccc
Q 026555 104 CEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKI 149 (237)
Q Consensus 104 ~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~~~~vl~~~~~~~ 149 (237)
+.++++++|||+||.+++.+|.++|++++++|++++....
T Consensus 77 ------~~~~v~liG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~ 116 (251)
T TIGR02427 77 ------GIERAVFCGLSLGGLIAQGLAARRPDRVRALVLSNTAAKI 116 (251)
T ss_pred ------CCCceEEEEeCchHHHHHHHHHHCHHHhHHHhhccCcccc
Confidence 6789999999999999999999999999999999876543
No 32
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.88 E-value=2.2e-21 Score=149.14 Aligned_cols=136 Identities=18% Similarity=0.277 Sum_probs=102.3
Q ss_pred ccccceeEeecCCcEEEEEEeecCCCCCcEEEEEEcCCCCCCcCchHHHHHHHHhcCCEEEEeecCCCCCCCCCCCCcCC
Q 026555 9 IKYDEEFILNSRRVKLFTCSWIPQNQEPKALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDN 88 (237)
Q Consensus 9 ~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~ 88 (237)
+.+..+++...++..++.....+.. ..+.++|++||+|.....|++.+ +.|++ ..+|+++|++|+|.|+.+.-.. +
T Consensus 63 v~~~~~~v~i~~~~~iw~~~~~~~~-~~~~plVliHGyGAg~g~f~~Nf-~~La~-~~~vyaiDllG~G~SSRP~F~~-d 138 (365)
T KOG4409|consen 63 VPYSKKYVRIPNGIEIWTITVSNES-ANKTPLVLIHGYGAGLGLFFRNF-DDLAK-IRNVYAIDLLGFGRSSRPKFSI-D 138 (365)
T ss_pred CCcceeeeecCCCceeEEEeecccc-cCCCcEEEEeccchhHHHHHHhh-hhhhh-cCceEEecccCCCCCCCCCCCC-C
Confidence 3455566666677777777776664 56788999999999999885554 77877 5999999999999998654321 2
Q ss_pred hhhHHHHHHHHHHHHHhhhhcCCceEEEEEeccchHHHHHHHhcCCCcccEEEEcCCccccc
Q 026555 89 FDDLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKIA 150 (237)
Q Consensus 89 ~~~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~~~~vl~~~~~~~~ 150 (237)
.....+...+-++.. +...+.++.+|+|||+||+++..||.+||++|+.+||++|..-..
T Consensus 139 ~~~~e~~fvesiE~W--R~~~~L~KmilvGHSfGGYLaa~YAlKyPerV~kLiLvsP~Gf~~ 198 (365)
T KOG4409|consen 139 PTTAEKEFVESIEQW--RKKMGLEKMILVGHSFGGYLAAKYALKYPERVEKLILVSPWGFPE 198 (365)
T ss_pred cccchHHHHHHHHHH--HHHcCCcceeEeeccchHHHHHHHHHhChHhhceEEEeccccccc
Confidence 111122333333444 444488999999999999999999999999999999999887655
No 33
>PRK07581 hypothetical protein; Validated
Probab=99.88 E-value=7e-22 Score=159.03 Aligned_cols=123 Identities=18% Similarity=0.084 Sum_probs=91.2
Q ss_pred cCCcEEEEEEeecCCCCCcEEEEEEcCCCCCCcCchHHHH---HHHHhcCCEEEEeecCCCCCCCCCCC--CcCChhh--
Q 026555 19 SRRVKLFTCSWIPQNQEPKALIFICHGYAMECSIGMNSTA---IRLANEGYACYGIDYQGHGKSAGLSG--YIDNFDD-- 91 (237)
Q Consensus 19 ~~g~~l~~~~~~~~~~~~~~~iv~~hG~~~~~~~~~~~~~---~~l~~~g~~v~~~d~~g~G~s~~~~~--~~~~~~~-- 91 (237)
.+|.+++|..+++...+..|+||++||++.+...| ..+. +.|...+|+|+++|+||||.|..... ..+++++
T Consensus 23 ~~~~~l~y~~~G~~~~~~~~~vll~~~~~~~~~~~-~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~ 101 (339)
T PRK07581 23 LPDARLAYKTYGTLNAAKDNAILYPTWYSGTHQDN-EWLIGPGRALDPEKYFIIIPNMFGNGLSSSPSNTPAPFNAARFP 101 (339)
T ss_pred cCCceEEEEecCccCCCCCCEEEEeCCCCCCcccc-hhhccCCCccCcCceEEEEecCCCCCCCCCCCCCCCCCCCCCCC
Confidence 46788999988764222346788888888776655 4443 46655679999999999999974432 1234433
Q ss_pred ---HHHHHHH----HHHHHHhhhhcCCce-EEEEEeccchHHHHHHHhcCCCcccEEEEcCCccc
Q 026555 92 ---LVDDCFN----HFTSICEKEENKEKM-RYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCK 148 (237)
Q Consensus 92 ---~~~d~~~----~~~~~~~~~~~~~~~-~~l~G~S~Gg~~a~~~a~~~p~~~~~~vl~~~~~~ 148 (237)
+++|+.+ +++.+ +.++ ++++||||||++|+.+|.++|++|+++|++++...
T Consensus 102 ~~~~~~~~~~~~~~l~~~l------gi~~~~~lvG~S~GG~va~~~a~~~P~~V~~Lvli~~~~~ 160 (339)
T PRK07581 102 HVTIYDNVRAQHRLLTEKF------GIERLALVVGWSMGAQQTYHWAVRYPDMVERAAPIAGTAK 160 (339)
T ss_pred ceeHHHHHHHHHHHHHHHh------CCCceEEEEEeCHHHHHHHHHHHHCHHHHhhheeeecCCC
Confidence 4666665 44556 7888 57999999999999999999999999999987654
No 34
>PRK10985 putative hydrolase; Provisional
Probab=99.88 E-value=2e-21 Score=155.19 Aligned_cols=141 Identities=15% Similarity=0.079 Sum_probs=103.8
Q ss_pred cCccccceeEeecCCcEEEEEEee-cCCCCCcEEEEEEcCCCCCCcC-chHHHHHHHHhcCCEEEEeecCCCCCCCCCCC
Q 026555 7 HNIKYDEEFILNSRRVKLFTCSWI-PQNQEPKALIFICHGYAMECSI-GMNSTAIRLANEGYACYGIDYQGHGKSAGLSG 84 (237)
Q Consensus 7 ~~~~~~~~~~~~~~g~~l~~~~~~-~~~~~~~~~iv~~hG~~~~~~~-~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~ 84 (237)
..+....+.+.+.||..+.+.... |.....+|+||++||++++... ++..++..|.++||+|+++|+||||.+.....
T Consensus 27 ~~~~~~~~~~~~~dg~~~~l~w~~~~~~~~~~p~vll~HG~~g~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~~~~~~ 106 (324)
T PRK10985 27 VLFTPYWQRLELPDGDFVDLAWSEDPAQARHKPRLVLFHGLEGSFNSPYAHGLLEAAQKRGWLGVVMHFRGCSGEPNRLH 106 (324)
T ss_pred CCCCcceeEEECCCCCEEEEecCCCCccCCCCCEEEEeCCCCCCCcCHHHHHHHHHHHHCCCEEEEEeCCCCCCCccCCc
Confidence 334556677888899877654322 2222457899999999877553 54678899999999999999999997764322
Q ss_pred CcCChhhHHHHHHHHHHHHHhhhhcCCceEEEEEeccchHHHHHHHhcCCCc--ccEEEEcCCccccc
Q 026555 85 YIDNFDDLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDY--FDGAVLVAPMCKIA 150 (237)
Q Consensus 85 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~--~~~~vl~~~~~~~~ 150 (237)
..+. ....+|+..+++.+ ++..+..+++++||||||.+++.++.++++. ++++|+++++....
T Consensus 107 ~~~~-~~~~~D~~~~i~~l--~~~~~~~~~~~vG~S~GG~i~~~~~~~~~~~~~~~~~v~i~~p~~~~ 171 (324)
T PRK10985 107 RIYH-SGETEDARFFLRWL--QREFGHVPTAAVGYSLGGNMLACLLAKEGDDLPLDAAVIVSAPLMLE 171 (324)
T ss_pred ceEC-CCchHHHHHHHHHH--HHhCCCCCEEEEEecchHHHHHHHHHhhCCCCCccEEEEEcCCCCHH
Confidence 2122 23468888888888 4444667899999999999988888876543 89999998887653
No 35
>PRK13604 luxD acyl transferase; Provisional
Probab=99.88 E-value=5.7e-21 Score=147.79 Aligned_cols=131 Identities=12% Similarity=0.096 Sum_probs=106.8
Q ss_pred ceeEeecCCcEEEEEEeecCC--CCCcEEEEEEcCCCCCCcCchHHHHHHHHhcCCEEEEeecCCC-CCCCCCCCCcCCh
Q 026555 13 EEFILNSRRVKLFTCSWIPQN--QEPKALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGH-GKSAGLSGYIDNF 89 (237)
Q Consensus 13 ~~~~~~~~g~~l~~~~~~~~~--~~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~-G~s~~~~~~~~~~ 89 (237)
...+.+.||.+|..+...|.+ ..+.++||++||++.+...+ ..+++.|+++||.|+.+|++|+ |.|++.... .+.
T Consensus 11 ~~~~~~~dG~~L~Gwl~~P~~~~~~~~~~vIi~HGf~~~~~~~-~~~A~~La~~G~~vLrfD~rg~~GeS~G~~~~-~t~ 88 (307)
T PRK13604 11 DHVICLENGQSIRVWETLPKENSPKKNNTILIASGFARRMDHF-AGLAEYLSSNGFHVIRYDSLHHVGLSSGTIDE-FTM 88 (307)
T ss_pred hheEEcCCCCEEEEEEEcCcccCCCCCCEEEEeCCCCCChHHH-HHHHHHHHHCCCEEEEecCCCCCCCCCCcccc-Ccc
Confidence 455678899999999998863 24668999999999986544 8999999999999999999988 999875433 344
Q ss_pred hhHHHHHHHHHHHHHhhhhcCCceEEEEEeccchHHHHHHHhcCCCcccEEEEcCCccccc
Q 026555 90 DDLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKIA 150 (237)
Q Consensus 90 ~~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~~~~vl~~~~~~~~ 150 (237)
.....|+.++++++++ . +..++.++||||||.+++..|... .++++|+.+|...+.
T Consensus 89 s~g~~Dl~aaid~lk~--~-~~~~I~LiG~SmGgava~~~A~~~--~v~~lI~~sp~~~l~ 144 (307)
T PRK13604 89 SIGKNSLLTVVDWLNT--R-GINNLGLIAASLSARIAYEVINEI--DLSFLITAVGVVNLR 144 (307)
T ss_pred cccHHHHHHHHHHHHh--c-CCCceEEEEECHHHHHHHHHhcCC--CCCEEEEcCCcccHH
Confidence 4568999999999943 3 457899999999999997777644 399999999988764
No 36
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.87 E-value=4.3e-21 Score=138.36 Aligned_cols=175 Identities=18% Similarity=0.191 Sum_probs=125.3
Q ss_pred cEEEEEEcCCCCCCcCchHHHHHHHHhcCCEEEEeecCCCCCCCCCCCCcCChhhHHHHHHHHHHHHHhhhhcCCceEEE
Q 026555 37 KALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEKEENKEKMRYL 116 (237)
Q Consensus 37 ~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l 116 (237)
...|+|+||+.++.... +.+++.|.++||.|.+|.+||||......-. .+.++|.+|+.+..+.+++ .+.+.|.+
T Consensus 15 ~~AVLllHGFTGt~~Dv-r~Lgr~L~e~GyTv~aP~ypGHG~~~e~fl~-t~~~DW~~~v~d~Y~~L~~---~gy~eI~v 89 (243)
T COG1647 15 NRAVLLLHGFTGTPRDV-RMLGRYLNENGYTVYAPRYPGHGTLPEDFLK-TTPRDWWEDVEDGYRDLKE---AGYDEIAV 89 (243)
T ss_pred CEEEEEEeccCCCcHHH-HHHHHHHHHCCceEecCCCCCCCCCHHHHhc-CCHHHHHHHHHHHHHHHHH---cCCCeEEE
Confidence 47899999999999977 9999999999999999999999987643323 5889999999999999842 16789999
Q ss_pred EEeccchHHHHHHHhcCCCcccEEEEcCCccccccccCChHHHHHHHHHhhhhCcCCcccCCCCcchhhccCHHHHHhhh
Q 026555 117 LGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKIAENVKPHPLVISVLTKLCKFIPTWKIIPSQDIVDVAFKLPEKRKEIR 196 (237)
Q Consensus 117 ~G~S~Gg~~a~~~a~~~p~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (237)
+|.||||.+++.+|.++| ++++|.+|++......-.........++.. ..... .+.+..+...
T Consensus 90 ~GlSmGGv~alkla~~~p--~K~iv~m~a~~~~k~~~~iie~~l~y~~~~-------kk~e~--------k~~e~~~~e~ 152 (243)
T COG1647 90 VGLSMGGVFALKLAYHYP--PKKIVPMCAPVNVKSWRIIIEGLLEYFRNA-------KKYEG--------KDQEQIDKEM 152 (243)
T ss_pred EeecchhHHHHHHHhhCC--ccceeeecCCcccccchhhhHHHHHHHHHh-------hhccC--------CCHHHHHHHH
Confidence 999999999999999998 999999998887654322111111111111 11111 1222222221
Q ss_pred hCCCcccCCCchhHHHHHHHHHHHHHhhccceeeeeeeecC
Q 026555 197 ANPYCYKGRPRLKTGYELMRVSMDLENRLDEVCSKIFNTKA 237 (237)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~g 237 (237)
.. + .........++.....++++.+..|..|++|++|
T Consensus 153 ~~---~-~~~~~~~~~~~~~~i~~~~~~~~~I~~pt~vvq~ 189 (243)
T COG1647 153 KS---Y-KDTPMTTTAQLKKLIKDARRSLDKIYSPTLVVQG 189 (243)
T ss_pred HH---h-hcchHHHHHHHHHHHHHHHhhhhhcccchhheec
Confidence 11 1 1223345556666667889999999999999986
No 37
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=99.87 E-value=5.8e-22 Score=160.10 Aligned_cols=126 Identities=15% Similarity=0.164 Sum_probs=99.1
Q ss_pred ecCCcEEEEEEeecCCCCCcEEEEEEcCCCCCCcC----------chHHHH---HHHHhcCCEEEEeecCC--CCCCCCC
Q 026555 18 NSRRVKLFTCSWIPQNQEPKALIFICHGYAMECSI----------GMNSTA---IRLANEGYACYGIDYQG--HGKSAGL 82 (237)
Q Consensus 18 ~~~g~~l~~~~~~~~~~~~~~~iv~~hG~~~~~~~----------~~~~~~---~~l~~~g~~v~~~d~~g--~G~s~~~ 82 (237)
..+|.+|+|..+++.+....++|||+||++++... |+..+. ..|...+|+|+++|+|| ||.|...
T Consensus 12 ~~~~~~~~y~~~g~~~~~~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~G~~~g~s~~~ 91 (351)
T TIGR01392 12 VLSDVRVAYETYGTLNAERSNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAIDTDRYFVVCSNVLGGCYGSTGPS 91 (351)
T ss_pred ccCCceEEEEeccccCCCCCCEEEEcCCcCcchhhcccCCCCCCCchhhccCCCCCcCCCceEEEEecCCCCCCCCCCCC
Confidence 34678999999986432345789999999997632 336664 35555679999999999 6665421
Q ss_pred ----C-------CCcCChhhHHHHHHHHHHHHHhhhhcCCce-EEEEEeccchHHHHHHHhcCCCcccEEEEcCCcccc
Q 026555 83 ----S-------GYIDNFDDLVDDCFNHFTSICEKEENKEKM-RYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKI 149 (237)
Q Consensus 83 ----~-------~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~-~~l~G~S~Gg~~a~~~a~~~p~~~~~~vl~~~~~~~ 149 (237)
. ...++++++++|+.++++.+ +.++ ++++||||||++++.++.++|++++++|++++....
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l------~~~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 164 (351)
T TIGR01392 92 SINPGGRPYGSDFPLITIRDDVKAQKLLLDHL------GIEQIAAVVGGSMGGMQALEWAIDYPERVRAIVVLATSARH 164 (351)
T ss_pred CCCCCCCcCCCCCCCCcHHHHHHHHHHHHHHc------CCCCceEEEEECHHHHHHHHHHHHChHhhheEEEEccCCcC
Confidence 0 11257889999999999888 7888 999999999999999999999999999999987654
No 38
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.87 E-value=1.6e-21 Score=149.23 Aligned_cols=105 Identities=22% Similarity=0.351 Sum_probs=88.5
Q ss_pred cEEEEEEcCCCCCCcCchHHHHHHHHhcCCEEEEeecCCCCCCCCCCC-CcCChhhHHHH-HHHHHHHHHhhhhcCCceE
Q 026555 37 KALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSG-YIDNFDDLVDD-CFNHFTSICEKEENKEKMR 114 (237)
Q Consensus 37 ~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~-~~~~~~~~~~d-~~~~~~~~~~~~~~~~~~~ 114 (237)
+|+||++||++++...| ..+.+.|+ .||+|+++|+||+|.|+.... ...++++.+++ +..+++.+ +.+++
T Consensus 1 ~~~vv~~hG~~~~~~~~-~~~~~~L~-~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~ 72 (251)
T TIGR03695 1 KPVLVFLHGFLGSGADW-QALIELLG-PHFRCLAIDLPGHGSSQSPDEIERYDFEEAAQDILATLLDQL------GIEPF 72 (251)
T ss_pred CCEEEEEcCCCCchhhH-HHHHHHhc-ccCeEEEEcCCCCCCCCCCCccChhhHHHHHHHHHHHHHHHc------CCCeE
Confidence 36799999999999987 89999998 689999999999999975432 33567777777 66666655 67899
Q ss_pred EEEEeccchHHHHHHHhcCCCcccEEEEcCCcccc
Q 026555 115 YLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKI 149 (237)
Q Consensus 115 ~l~G~S~Gg~~a~~~a~~~p~~~~~~vl~~~~~~~ 149 (237)
+++|||+||.+++.++.++|+.+++++++++....
T Consensus 73 ~l~G~S~Gg~ia~~~a~~~~~~v~~lil~~~~~~~ 107 (251)
T TIGR03695 73 FLVGYSMGGRIALYYALQYPERVQGLILESGSPGL 107 (251)
T ss_pred EEEEeccHHHHHHHHHHhCchheeeeEEecCCCCc
Confidence 99999999999999999999999999999876544
No 39
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=99.86 E-value=3.9e-21 Score=149.89 Aligned_cols=118 Identities=19% Similarity=0.237 Sum_probs=99.0
Q ss_pred cCCcEEEEEEeecCCCCCcEEEEEEcCCCCCCcCchHHHHHHHHhcCCEEEEeecCCCCCCCCCCCCcCChhhHHHHHHH
Q 026555 19 SRRVKLFTCSWIPQNQEPKALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFN 98 (237)
Q Consensus 19 ~~g~~l~~~~~~~~~~~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~d~~~ 98 (237)
.+|.+++|.. |. +.+|+|||+||++.+...| ..+...|.+.||+|+++|+||||.|........+++++++++.+
T Consensus 4 ~~~~~~~~~~--~~--~~~p~vvliHG~~~~~~~w-~~~~~~L~~~g~~vi~~dl~g~G~s~~~~~~~~~~~~~~~~l~~ 78 (273)
T PLN02211 4 ENGEEVTDMK--PN--RQPPHFVLIHGISGGSWCW-YKIRCLMENSGYKVTCIDLKSAGIDQSDADSVTTFDEYNKPLID 78 (273)
T ss_pred cccccccccc--cc--CCCCeEEEECCCCCCcCcH-HHHHHHHHhCCCEEEEecccCCCCCCCCcccCCCHHHHHHHHHH
Confidence 4677777775 43 4467899999999998888 99999998889999999999999875433333688888888888
Q ss_pred HHHHHHhhhhcC-CceEEEEEeccchHHHHHHHhcCCCcccEEEEcCCcc
Q 026555 99 HFTSICEKEENK-EKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMC 147 (237)
Q Consensus 99 ~~~~~~~~~~~~-~~~~~l~G~S~Gg~~a~~~a~~~p~~~~~~vl~~~~~ 147 (237)
+++.+ . .++++++||||||.++..++..+|++++++|++++..
T Consensus 79 ~i~~l------~~~~~v~lvGhS~GG~v~~~~a~~~p~~v~~lv~~~~~~ 122 (273)
T PLN02211 79 FLSSL------PENEKVILVGHSAGGLSVTQAIHRFPKKICLAVYVAATM 122 (273)
T ss_pred HHHhc------CCCCCEEEEEECchHHHHHHHHHhChhheeEEEEecccc
Confidence 88776 3 4799999999999999999999999999999997653
No 40
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=99.86 E-value=2.4e-21 Score=156.03 Aligned_cols=116 Identities=14% Similarity=0.101 Sum_probs=90.6
Q ss_pred cCCcEEEEEEeecCCCCCcEEEEEEcCCCCCCc------------CchHHHHH---HHHhcCCEEEEeecCCCCCCCCCC
Q 026555 19 SRRVKLFTCSWIPQNQEPKALIFICHGYAMECS------------IGMNSTAI---RLANEGYACYGIDYQGHGKSAGLS 83 (237)
Q Consensus 19 ~~g~~l~~~~~~~~~~~~~~~iv~~hG~~~~~~------------~~~~~~~~---~l~~~g~~v~~~d~~g~G~s~~~~ 83 (237)
.+|.+++|..+++.. .| +||+||+.++.. .| ..+.. .|...+|+|+++|+||||.|...
T Consensus 43 ~~~~~l~y~~~G~~~---~p-~vll~g~~~~~~~~~~~~~~~~~~~w-~~~v~~~~~L~~~~~~Vi~~Dl~G~g~s~~~- 116 (343)
T PRK08775 43 LEDLRLRYELIGPAG---AP-VVFVAGGISAHRHVAATATFPEKGWW-EGLVGSGRALDPARFRLLAFDFIGADGSLDV- 116 (343)
T ss_pred CCCceEEEEEeccCC---CC-EEEEecCCCcccccccccCCCCCCcc-hhccCCCCccCccccEEEEEeCCCCCCCCCC-
Confidence 478899999885421 23 666665555544 34 77775 56434699999999999987532
Q ss_pred CCcCChhhHHHHHHHHHHHHHhhhhcCCce-EEEEEeccchHHHHHHHhcCCCcccEEEEcCCccc
Q 026555 84 GYIDNFDDLVDDCFNHFTSICEKEENKEKM-RYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCK 148 (237)
Q Consensus 84 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~-~~l~G~S~Gg~~a~~~a~~~p~~~~~~vl~~~~~~ 148 (237)
.++.+++++|+.++++.+ +.++ ++++||||||++++.+|.++|++|+++|++++...
T Consensus 117 --~~~~~~~a~dl~~ll~~l------~l~~~~~lvG~SmGG~vA~~~A~~~P~~V~~LvLi~s~~~ 174 (343)
T PRK08775 117 --PIDTADQADAIALLLDAL------GIARLHAFVGYSYGALVGLQFASRHPARVRTLVVVSGAHR 174 (343)
T ss_pred --CCCHHHHHHHHHHHHHHc------CCCcceEEEEECHHHHHHHHHHHHChHhhheEEEECcccc
Confidence 256788999999999988 7766 47999999999999999999999999999988654
No 41
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=99.85 E-value=1.4e-20 Score=153.27 Aligned_cols=125 Identities=18% Similarity=0.248 Sum_probs=96.2
Q ss_pred cCCcEEEEEEeecCCCCCcEEEEEEcCCCCCCcCc------------hHHHH---HHHHhcCCEEEEeecCCC-CCCCCC
Q 026555 19 SRRVKLFTCSWIPQNQEPKALIFICHGYAMECSIG------------MNSTA---IRLANEGYACYGIDYQGH-GKSAGL 82 (237)
Q Consensus 19 ~~g~~l~~~~~~~~~~~~~~~iv~~hG~~~~~~~~------------~~~~~---~~l~~~g~~v~~~d~~g~-G~s~~~ 82 (237)
.+|.+++|..++..+.+..|+|||+||++++...| +..+. ..+...+|+|+++|++|+ |.|++.
T Consensus 30 ~~~~~~~y~~~G~~~~~~~p~vvl~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~Dl~G~~~~s~~~ 109 (379)
T PRK00175 30 LPPVELAYETYGTLNADRSNAVLICHALTGDHHVAGPHSPDDPKPGWWDNMVGPGKPIDTDRYFVICSNVLGGCKGSTGP 109 (379)
T ss_pred cCCceEEEEeccccCCCCCCEEEEeCCcCCchhhcccccccCCCCcchhhccCCCCccCccceEEEeccCCCCCCCCCCC
Confidence 35677899999754323468899999999988742 25554 133244799999999983 434321
Q ss_pred C----C---------CcCChhhHHHHHHHHHHHHHhhhhcCCce-EEEEEeccchHHHHHHHhcCCCcccEEEEcCCccc
Q 026555 83 S----G---------YIDNFDDLVDDCFNHFTSICEKEENKEKM-RYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCK 148 (237)
Q Consensus 83 ~----~---------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~-~~l~G~S~Gg~~a~~~a~~~p~~~~~~vl~~~~~~ 148 (237)
. . ..++++++++++.++++.+ +.++ ++++||||||++++.+|.++|++++++|++++...
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l------~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 183 (379)
T PRK00175 110 SSINPDTGKPYGSDFPVITIRDWVRAQARLLDAL------GITRLAAVVGGSMGGMQALEWAIDYPDRVRSALVIASSAR 183 (379)
T ss_pred CCCCCCCCCcccCCCCcCCHHHHHHHHHHHHHHh------CCCCceEEEEECHHHHHHHHHHHhChHhhhEEEEECCCcc
Confidence 1 0 1368999999999999998 7888 58999999999999999999999999999987765
Q ss_pred c
Q 026555 149 I 149 (237)
Q Consensus 149 ~ 149 (237)
.
T Consensus 184 ~ 184 (379)
T PRK00175 184 L 184 (379)
T ss_pred c
Confidence 4
No 42
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.85 E-value=8.6e-20 Score=149.62 Aligned_cols=135 Identities=13% Similarity=0.074 Sum_probs=101.9
Q ss_pred cccceeEeecCCcEEEEEEeecCCCCCcEEEEEEcCCCCCCcCchHHHHHHHHhcCCEEEEeecCCCCCCCCCCCCcCCh
Q 026555 10 KYDEEFILNSRRVKLFTCSWIPQNQEPKALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNF 89 (237)
Q Consensus 10 ~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~ 89 (237)
..+...+...+|.++..+.+.|..+++.|+||++||+++.....+..+++.|.++||+|+++|+||+|.|.+.... .+.
T Consensus 167 ~~e~v~i~~~~g~~l~g~l~~P~~~~~~P~Vli~gG~~~~~~~~~~~~~~~La~~Gy~vl~~D~pG~G~s~~~~~~-~d~ 245 (414)
T PRK05077 167 ELKELEFPIPGGGPITGFLHLPKGDGPFPTVLVCGGLDSLQTDYYRLFRDYLAPRGIAMLTIDMPSVGFSSKWKLT-QDS 245 (414)
T ss_pred ceEEEEEEcCCCcEEEEEEEECCCCCCccEEEEeCCcccchhhhHHHHHHHHHhCCCEEEEECCCCCCCCCCCCcc-ccH
Confidence 3445556666777899998888754678899988888876543337788999999999999999999998653211 122
Q ss_pred hhHHHHHHHHHHHHHhhhhcCCceEEEEEeccchHHHHHHHhcCCCcccEEEEcCCccc
Q 026555 90 DDLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCK 148 (237)
Q Consensus 90 ~~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~~~~vl~~~~~~ 148 (237)
.. ...++++.+......+.+++.++|||+||++++.+|..+|++++++|++++...
T Consensus 246 ~~---~~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~p~ri~a~V~~~~~~~ 301 (414)
T PRK05077 246 SL---LHQAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLEPPRLKAVACLGPVVH 301 (414)
T ss_pred HH---HHHHHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHhCCcCceEEEEECCccc
Confidence 22 224556666433344678999999999999999999999999999999988764
No 43
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.85 E-value=3.6e-20 Score=151.65 Aligned_cols=117 Identities=21% Similarity=0.205 Sum_probs=88.0
Q ss_pred EEEEEEeecCCCCCcEEEEEEcCCCCCCcCchHHHHHHHHhcCCEEEEeecCCCCCCCCCCCCcCChh----hHHHHHHH
Q 026555 23 KLFTCSWIPQNQEPKALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFD----DLVDDCFN 98 (237)
Q Consensus 23 ~l~~~~~~~~~~~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~----~~~~d~~~ 98 (237)
.+++..+.+. +.+|+|||+||++.+...| ....+.|.+. |+|+++|+||||.|+.......+.+ .+++++.+
T Consensus 93 ~~~~~~~~~~--~~~p~vvllHG~~~~~~~~-~~~~~~L~~~-~~vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~i~~ 168 (402)
T PLN02894 93 FINTVTFDSK--EDAPTLVMVHGYGASQGFF-FRNFDALASR-FRVIAIDQLGWGGSSRPDFTCKSTEETEAWFIDSFEE 168 (402)
T ss_pred eEEEEEecCC--CCCCEEEEECCCCcchhHH-HHHHHHHHhC-CEEEEECCCCCCCCCCCCcccccHHHHHHHHHHHHHH
Confidence 6666555332 4568999999999988777 6677888764 9999999999999975432211222 23444445
Q ss_pred HHHHHHhhhhcCCceEEEEEeccchHHHHHHHhcCCCcccEEEEcCCcccc
Q 026555 99 HFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKI 149 (237)
Q Consensus 99 ~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~~~~vl~~~~~~~ 149 (237)
+++.+ +.++++++||||||.+++.+|.++|++++++|+++|....
T Consensus 169 ~~~~l------~~~~~~lvGhS~GG~la~~~a~~~p~~v~~lvl~~p~~~~ 213 (402)
T PLN02894 169 WRKAK------NLSNFILLGHSFGGYVAAKYALKHPEHVQHLILVGPAGFS 213 (402)
T ss_pred HHHHc------CCCCeEEEEECHHHHHHHHHHHhCchhhcEEEEECCcccc
Confidence 54444 6789999999999999999999999999999999876543
No 44
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.85 E-value=5.6e-21 Score=155.61 Aligned_cols=120 Identities=21% Similarity=0.270 Sum_probs=99.7
Q ss_pred eecCCcEEEEEEeecCCCCCcEEEEEEcCCCCCCcCchHHHHHHHHhcCCEEEEeecCCCCCCCCCCCCcCChhhHHHHH
Q 026555 17 LNSRRVKLFTCSWIPQNQEPKALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDDLVDDC 96 (237)
Q Consensus 17 ~~~~g~~l~~~~~~~~~~~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~d~ 96 (237)
...++.+++|..+++. ..++|||+||++++...| ..+...|.+. |+|+++|+||||.|..... ..+++++++++
T Consensus 114 ~~~~~~~i~~~~~g~~---~~~~vl~~HG~~~~~~~~-~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~-~~~~~~~~~~~ 187 (371)
T PRK14875 114 ARIGGRTVRYLRLGEG---DGTPVVLIHGFGGDLNNW-LFNHAALAAG-RPVIALDLPGHGASSKAVG-AGSLDELAAAV 187 (371)
T ss_pred ceEcCcEEEEecccCC---CCCeEEEECCCCCccchH-HHHHHHHhcC-CEEEEEcCCCCCCCCCCCC-CCCHHHHHHHH
Confidence 3446777887766442 357899999999999988 7888888765 9999999999999964433 25788888899
Q ss_pred HHHHHHHHhhhhcCCceEEEEEeccchHHHHHHHhcCCCcccEEEEcCCccc
Q 026555 97 FNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCK 148 (237)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~~~~vl~~~~~~ 148 (237)
.++++.+ +..+++++|||+||.+++.+|.++|++++++|++++...
T Consensus 188 ~~~~~~~------~~~~~~lvG~S~Gg~~a~~~a~~~~~~v~~lv~~~~~~~ 233 (371)
T PRK14875 188 LAFLDAL------GIERAHLVGHSMGGAVALRLAARAPQRVASLTLIAPAGL 233 (371)
T ss_pred HHHHHhc------CCccEEEEeechHHHHHHHHHHhCchheeEEEEECcCCc
Confidence 8888877 778999999999999999999999999999999987643
No 45
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.84 E-value=1.8e-20 Score=143.24 Aligned_cols=99 Identities=22% Similarity=0.323 Sum_probs=80.7
Q ss_pred cEEEEEEcCCCCCCcCchHHHHHHHHhcCCEEEEeecCCCCCCCCCCCCcCChhhHHHHHHHHHHHHHhhhhcCCceEEE
Q 026555 37 KALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEKEENKEKMRYL 116 (237)
Q Consensus 37 ~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l 116 (237)
+|+||++||++++...| ..+.+.|.+ +|+|+++|+||+|.|..... .+++++++++.+ . ..+++++
T Consensus 4 ~~~iv~~HG~~~~~~~~-~~~~~~l~~-~~~vi~~d~~G~G~s~~~~~--~~~~~~~~~~~~----~------~~~~~~l 69 (245)
T TIGR01738 4 NVHLVLIHGWGMNAEVF-RCLDEELSA-HFTLHLVDLPGHGRSRGFGP--LSLADAAEAIAA----Q------APDPAIW 69 (245)
T ss_pred CceEEEEcCCCCchhhH-HHHHHhhcc-CeEEEEecCCcCccCCCCCC--cCHHHHHHHHHH----h------CCCCeEE
Confidence 46899999999999987 899999975 59999999999999875422 355555554433 2 2468999
Q ss_pred EEeccchHHHHHHHhcCCCcccEEEEcCCcccc
Q 026555 117 LGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKI 149 (237)
Q Consensus 117 ~G~S~Gg~~a~~~a~~~p~~~~~~vl~~~~~~~ 149 (237)
+||||||.+++.++.++|++++++|++++....
T Consensus 70 vG~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~ 102 (245)
T TIGR01738 70 LGWSLGGLVALHIAATHPDRVRALVTVASSPCF 102 (245)
T ss_pred EEEcHHHHHHHHHHHHCHHhhheeeEecCCccc
Confidence 999999999999999999999999999876543
No 46
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.83 E-value=1.8e-18 Score=135.04 Aligned_cols=128 Identities=20% Similarity=0.256 Sum_probs=96.2
Q ss_pred eEeecCCcEEEEEEeecCCCCCcEEEEEEcCCCCC-CcCc--hHHHHHHHHhcCCEEEEeecCCCCCCCCCCCCcCChhh
Q 026555 15 FILNSRRVKLFTCSWIPQNQEPKALIFICHGYAME-CSIG--MNSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDD 91 (237)
Q Consensus 15 ~~~~~~g~~l~~~~~~~~~~~~~~~iv~~hG~~~~-~~~~--~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~ 91 (237)
.....+|.++....+.|.+. .++.||++||.... ...+ +..+++.|+++||+|+++|++|||.|.+.. .++++
T Consensus 5 ~~~~~~~~~l~g~~~~p~~~-~~~~vv~i~gg~~~~~g~~~~~~~la~~l~~~G~~v~~~Dl~G~G~S~~~~---~~~~~ 80 (274)
T TIGR03100 5 LTFSCEGETLVGVLHIPGAS-HTTGVLIVVGGPQYRVGSHRQFVLLARRLAEAGFPVLRFDYRGMGDSEGEN---LGFEG 80 (274)
T ss_pred EEEEcCCcEEEEEEEcCCCC-CCCeEEEEeCCccccCCchhHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCC---CCHHH
Confidence 34456778888888888753 34566666665432 2211 256789999999999999999999987532 46778
Q ss_pred HHHHHHHHHHHHHhhhhc-CCceEEEEEeccchHHHHHHHhcCCCcccEEEEcCCcccc
Q 026555 92 LVDDCFNHFTSICEKEEN-KEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKI 149 (237)
Q Consensus 92 ~~~d~~~~~~~~~~~~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~~~~~~vl~~~~~~~ 149 (237)
+.+|+.++++.+ +... +.++++++|||+||.+++.++.. ++.++++|+++|....
T Consensus 81 ~~~d~~~~~~~l--~~~~~g~~~i~l~G~S~Gg~~a~~~a~~-~~~v~~lil~~p~~~~ 136 (274)
T TIGR03100 81 IDADIAAAIDAF--REAAPHLRRIVAWGLCDAASAALLYAPA-DLRVAGLVLLNPWVRT 136 (274)
T ss_pred HHHHHHHHHHHH--HhhCCCCCcEEEEEECHHHHHHHHHhhh-CCCccEEEEECCccCC
Confidence 889999999998 3332 34679999999999999999765 4679999999987553
No 47
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.81 E-value=8.8e-20 Score=144.60 Aligned_cols=109 Identities=23% Similarity=0.310 Sum_probs=91.1
Q ss_pred CCcEEEEEEcCCCCCCcCchHHHHHHHHhc-CCEEEEeecCCCCC-CCCCCCCcCChhhHHHHHHHHHHHHHhhhhcCCc
Q 026555 35 EPKALIFICHGYAMECSIGMNSTAIRLANE-GYACYGIDYQGHGK-SAGLSGYIDNFDDLVDDCFNHFTSICEKEENKEK 112 (237)
Q Consensus 35 ~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~-g~~v~~~d~~g~G~-s~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 112 (237)
..+++||++|||+.+...| +.+...|.+. |+.|+++|++|+|. |..+....++..++++-+..++... ..+
T Consensus 56 ~~~~pvlllHGF~~~~~~w-~~~~~~L~~~~~~~v~aiDl~G~g~~s~~~~~~~y~~~~~v~~i~~~~~~~------~~~ 128 (326)
T KOG1454|consen 56 KDKPPVLLLHGFGASSFSW-RRVVPLLSKAKGLRVLAIDLPGHGYSSPLPRGPLYTLRELVELIRRFVKEV------FVE 128 (326)
T ss_pred CCCCcEEEeccccCCcccH-hhhccccccccceEEEEEecCCCCcCCCCCCCCceehhHHHHHHHHHHHhh------cCc
Confidence 3578899999999988888 8888888776 59999999999994 4444455577788888888777776 778
Q ss_pred eEEEEEeccchHHHHHHHhcCCCcccEEE---EcCCccccc
Q 026555 113 MRYLLGESMGGAMVLLLHRKKPDYFDGAV---LVAPMCKIA 150 (237)
Q Consensus 113 ~~~l~G~S~Gg~~a~~~a~~~p~~~~~~v---l~~~~~~~~ 150 (237)
+++++|||+||.+|+.+|+.+|+.|++++ ++++.....
T Consensus 129 ~~~lvghS~Gg~va~~~Aa~~P~~V~~lv~~~~~~~~~~~~ 169 (326)
T KOG1454|consen 129 PVSLVGHSLGGIVALKAAAYYPETVDSLVLLDLLGPPVYST 169 (326)
T ss_pred ceEEEEeCcHHHHHHHHHHhCcccccceeeecccccccccC
Confidence 89999999999999999999999999999 666655543
No 48
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.81 E-value=2.4e-19 Score=142.27 Aligned_cols=126 Identities=19% Similarity=0.138 Sum_probs=100.0
Q ss_pred cceeEeecCCcEEEEEEeecCCCCCcEEEEEEcCCCCCCcCchHHHHHHHHhcCCEEEEeecCCCCCCCCCCC-CcCChh
Q 026555 12 DEEFILNSRRVKLFTCSWIPQNQEPKALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSG-YIDNFD 90 (237)
Q Consensus 12 ~~~~~~~~~g~~l~~~~~~~~~~~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~-~~~~~~ 90 (237)
.+.++...+|.+++|..+++.+ .++|||+||++++... ..+...+...+|+|+++|+||||.|..... ...+.+
T Consensus 5 ~~~~~~~~~~~~l~y~~~g~~~---~~~lvllHG~~~~~~~--~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~ 79 (306)
T TIGR01249 5 VSGYLNVSDNHQLYYEQSGNPD---GKPVVFLHGGPGSGTD--PGCRRFFDPETYRIVLFDQRGCGKSTPHACLEENTTW 79 (306)
T ss_pred cCCeEEcCCCcEEEEEECcCCC---CCEEEEECCCCCCCCC--HHHHhccCccCCEEEEECCCCCCCCCCCCCcccCCHH
Confidence 3567777789999998875432 4569999998776553 344455655689999999999999985432 224667
Q ss_pred hHHHHHHHHHHHHHhhhhcCCceEEEEEeccchHHHHHHHhcCCCcccEEEEcCCccc
Q 026555 91 DLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCK 148 (237)
Q Consensus 91 ~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~~~~vl~~~~~~ 148 (237)
++++|+..+++.+ +.++++++||||||.+++.++.++|++++++|++++...
T Consensus 80 ~~~~dl~~l~~~l------~~~~~~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~~~ 131 (306)
T TIGR01249 80 DLVADIEKLREKL------GIKNWLVFGGSWGSTLALAYAQTHPEVVTGLVLRGIFLL 131 (306)
T ss_pred HHHHHHHHHHHHc------CCCCEEEEEECHHHHHHHHHHHHChHhhhhheeeccccC
Confidence 8888888888877 778999999999999999999999999999999987654
No 49
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.81 E-value=2.3e-19 Score=167.50 Aligned_cols=106 Identities=20% Similarity=0.264 Sum_probs=90.9
Q ss_pred CcEEEEEEcCCCCCCcCchHHHHHHHHhcCCEEEEeecCCCCCCCCCC-------CCcCChhhHHHHHHHHHHHHHhhhh
Q 026555 36 PKALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLS-------GYIDNFDDLVDDCFNHFTSICEKEE 108 (237)
Q Consensus 36 ~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~-------~~~~~~~~~~~d~~~~~~~~~~~~~ 108 (237)
.+++|||+||++++...| ..+.+.|.+. |+|+++|+||||.|.... ...++++.+++++.++++.+
T Consensus 1370 ~~~~vVllHG~~~s~~~w-~~~~~~L~~~-~rVi~~Dl~G~G~S~~~~~~~~~~~~~~~si~~~a~~l~~ll~~l----- 1442 (1655)
T PLN02980 1370 EGSVVLFLHGFLGTGEDW-IPIMKAISGS-ARCISIDLPGHGGSKIQNHAKETQTEPTLSVELVADLLYKLIEHI----- 1442 (1655)
T ss_pred CCCeEEEECCCCCCHHHH-HHHHHHHhCC-CEEEEEcCCCCCCCCCccccccccccccCCHHHHHHHHHHHHHHh-----
Confidence 457899999999999987 8899999764 999999999999987432 12357888889998888887
Q ss_pred cCCceEEEEEeccchHHHHHHHhcCCCcccEEEEcCCcccc
Q 026555 109 NKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKI 149 (237)
Q Consensus 109 ~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~~~~vl~~~~~~~ 149 (237)
+.++++++||||||.+++.++.++|++++++|++++....
T Consensus 1443 -~~~~v~LvGhSmGG~iAl~~A~~~P~~V~~lVlis~~p~~ 1482 (1655)
T PLN02980 1443 -TPGKVTLVGYSMGARIALYMALRFSDKIEGAVIISGSPGL 1482 (1655)
T ss_pred -CCCCEEEEEECHHHHHHHHHHHhChHhhCEEEEECCCCcc
Confidence 7789999999999999999999999999999999875443
No 50
>PRK05855 short chain dehydrogenase; Validated
Probab=99.79 E-value=2.6e-18 Score=147.77 Aligned_cols=121 Identities=17% Similarity=0.231 Sum_probs=95.7
Q ss_pred ceeEeecCCcEEEEEEeecCCCCCcEEEEEEcCCCCCCcCchHHHHHHHHhcCCEEEEeecCCCCCCCCCC-CCcCChhh
Q 026555 13 EEFILNSRRVKLFTCSWIPQNQEPKALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLS-GYIDNFDD 91 (237)
Q Consensus 13 ~~~~~~~~g~~l~~~~~~~~~~~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~-~~~~~~~~ 91 (237)
..++...+|.+++|..+++. ..|+|||+||++++...| ..+.+.| ..||+|+++|+||||.|.... ...+++++
T Consensus 4 ~~~~~~~~g~~l~~~~~g~~---~~~~ivllHG~~~~~~~w-~~~~~~L-~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~ 78 (582)
T PRK05855 4 RRTVVSSDGVRLAVYEWGDP---DRPTVVLVHGYPDNHEVW-DGVAPLL-ADRFRVVAYDVRGAGRSSAPKRTAAYTLAR 78 (582)
T ss_pred eEEEEeeCCEEEEEEEcCCC---CCCeEEEEcCCCchHHHH-HHHHHHh-hcceEEEEecCCCCCCCCCCCcccccCHHH
Confidence 35566779999999988643 257899999999998877 8899999 457999999999999997543 22468999
Q ss_pred HHHHHHHHHHHHHhhhhcCCc-eEEEEEeccchHHHHHHHhc--CCCcccEEEEcC
Q 026555 92 LVDDCFNHFTSICEKEENKEK-MRYLLGESMGGAMVLLLHRK--KPDYFDGAVLVA 144 (237)
Q Consensus 92 ~~~d~~~~~~~~~~~~~~~~~-~~~l~G~S~Gg~~a~~~a~~--~p~~~~~~vl~~ 144 (237)
+++|+.++++.+ +.. +++++||||||.+++.++.+ .++.+..++.++
T Consensus 79 ~a~dl~~~i~~l------~~~~~~~lvGhS~Gg~~a~~~a~~~~~~~~v~~~~~~~ 128 (582)
T PRK05855 79 LADDFAAVIDAV------SPDRPVHLLAHDWGSIQGWEAVTRPRAAGRIASFTSVS 128 (582)
T ss_pred HHHHHHHHHHHh------CCCCcEEEEecChHHHHHHHHHhCccchhhhhhheecc
Confidence 999999999987 544 59999999999999888766 234444444443
No 51
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.79 E-value=7.4e-18 Score=129.21 Aligned_cols=221 Identities=13% Similarity=0.085 Sum_probs=134.8
Q ss_pred ccccceeEeecCCcEEEEEEeecCCCCCcEEEEEEcCCCCCCc-CchHHHHHHHHhcCCEEEEeecCCCCCCCCCCCCcC
Q 026555 9 IKYDEEFILNSRRVKLFTCSWIPQNQEPKALIFICHGYAMECS-IGMNSTAIRLANEGYACYGIDYQGHGKSAGLSGYID 87 (237)
Q Consensus 9 ~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~iv~~hG~~~~~~-~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~ 87 (237)
+.++.+.+.+.||..+-.....++....+|.||++||+.++++ .|.+.+++.+.+.||.++++++|||+.+.......+
T Consensus 47 ~~~~re~v~~pdg~~~~ldw~~~p~~~~~P~vVl~HGL~G~s~s~y~r~L~~~~~~rg~~~Vv~~~Rgcs~~~n~~p~~y 126 (345)
T COG0429 47 VAYTRERLETPDGGFIDLDWSEDPRAAKKPLVVLFHGLEGSSNSPYARGLMRALSRRGWLVVVFHFRGCSGEANTSPRLY 126 (345)
T ss_pred cccceEEEEcCCCCEEEEeeccCccccCCceEEEEeccCCCCcCHHHHHHHHHHHhcCCeEEEEecccccCCcccCccee
Confidence 4456677888887766655555443355789999999976665 466789999999999999999999998875444433
Q ss_pred ChhhHHHHHHHHHHHHHhhhhcCCceEEEEEeccch-HHHHHHHhcCCC-cccEEEEcCCcccccccc---CChHH----
Q 026555 88 NFDDLVDDCFNHFTSICEKEENKEKMRYLLGESMGG-AMVLLLHRKKPD-YFDGAVLVAPMCKIAENV---KPHPL---- 158 (237)
Q Consensus 88 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg-~~a~~~a~~~p~-~~~~~vl~~~~~~~~~~~---~~~~~---- 158 (237)
. ....+|+..+++++ +......++..+|+|+|| +++..++.+..+ .+.+.+.+|.+.++.... ...+.
T Consensus 127 h-~G~t~D~~~~l~~l--~~~~~~r~~~avG~SLGgnmLa~ylgeeg~d~~~~aa~~vs~P~Dl~~~~~~l~~~~s~~ly 203 (345)
T COG0429 127 H-SGETEDIRFFLDWL--KARFPPRPLYAVGFSLGGNMLANYLGEEGDDLPLDAAVAVSAPFDLEACAYRLDSGFSLRLY 203 (345)
T ss_pred c-ccchhHHHHHHHHH--HHhCCCCceEEEEecccHHHHHHHHHhhccCcccceeeeeeCHHHHHHHHHHhcCchhhhhh
Confidence 3 34458999999999 666788999999999999 555555554322 356666666665553211 00111
Q ss_pred HHHHHH----HhhhhCcCCcccCCCCcchh-hccCHHHHHhhhhCCCcccCCCchhHHHHHHHHHHHHHhhccceeeeee
Q 026555 159 VISVLT----KLCKFIPTWKIIPSQDIVDV-AFKLPEKRKEIRANPYCYKGRPRLKTGYELMRVSMDLENRLDEVCSKIF 233 (237)
Q Consensus 159 ~~~~~~----~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l 233 (237)
.+.+.+ ........+ ....... ...-+.....-.-|..............++++.. +....+++|.+|+|
T Consensus 204 ~r~l~~~L~~~~~~kl~~l----~~~~p~~~~~~ik~~~ti~eFD~~~Tap~~Gf~da~dYYr~a-Ss~~~L~~Ir~PtL 278 (345)
T COG0429 204 SRYLLRNLKRNAARKLKEL----EPSLPGTVLAAIKRCRTIREFDDLLTAPLHGFADAEDYYRQA-SSLPLLPKIRKPTL 278 (345)
T ss_pred HHHHHHHHHHHHHHHHHhc----CcccCcHHHHHHHhhchHHhccceeeecccCCCcHHHHHHhc-cccccccccccceE
Confidence 111111 111111111 1111111 1111111111222333333345566666766654 55778999999999
Q ss_pred eecC
Q 026555 234 NTKA 237 (237)
Q Consensus 234 ii~g 237 (237)
||++
T Consensus 279 ii~A 282 (345)
T COG0429 279 IINA 282 (345)
T ss_pred EEec
Confidence 9985
No 52
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.78 E-value=6.2e-18 Score=136.62 Aligned_cols=122 Identities=18% Similarity=0.174 Sum_probs=94.8
Q ss_pred EEEEEeecCCC-CCcEEEEEEcCCCCCCcCc----hHHHHHHHHhcCCEEEEeecCCCCCCCCCCCCcCChhhHHH-HHH
Q 026555 24 LFTCSWIPQNQ-EPKALIFICHGYAMECSIG----MNSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDDLVD-DCF 97 (237)
Q Consensus 24 l~~~~~~~~~~-~~~~~iv~~hG~~~~~~~~----~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~-d~~ 97 (237)
+..+.|.|..+ ..+++||++||+..+...+ .+++++.|.++||+|+++|++|+|.+... .++++++. ++.
T Consensus 48 ~~l~~~~~~~~~~~~~pvl~v~~~~~~~~~~d~~~~~~~~~~L~~~G~~V~~~D~~g~g~s~~~----~~~~d~~~~~~~ 123 (350)
T TIGR01836 48 VVLYRYTPVKDNTHKTPLLIVYALVNRPYMLDLQEDRSLVRGLLERGQDVYLIDWGYPDRADRY----LTLDDYINGYID 123 (350)
T ss_pred EEEEEecCCCCcCCCCcEEEeccccccceeccCCCCchHHHHHHHCCCeEEEEeCCCCCHHHhc----CCHHHHHHHHHH
Confidence 34444556532 3355799999986544322 15899999999999999999999977533 46777765 588
Q ss_pred HHHHHHHhhhhcCCceEEEEEeccchHHHHHHHhcCCCcccEEEEcCCcccccc
Q 026555 98 NHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKIAE 151 (237)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~~~~vl~~~~~~~~~ 151 (237)
++++.+ .+..+.++++++||||||.+++.++..+|++++++|+++++.++..
T Consensus 124 ~~v~~l--~~~~~~~~i~lvGhS~GG~i~~~~~~~~~~~v~~lv~~~~p~~~~~ 175 (350)
T TIGR01836 124 KCVDYI--CRTSKLDQISLLGICQGGTFSLCYAALYPDKIKNLVTMVTPVDFET 175 (350)
T ss_pred HHHHHH--HHHhCCCcccEEEECHHHHHHHHHHHhCchheeeEEEeccccccCC
Confidence 888888 4455678999999999999999999999999999999999887643
No 53
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=99.78 E-value=2.5e-18 Score=146.39 Aligned_cols=132 Identities=17% Similarity=0.136 Sum_probs=106.8
Q ss_pred eecCCcEEEEEEeecCCCCCcEEEEEEcCCCCCCc---CchHHHHHHHHhcCCEEEEeecCCCCCCCCCCCCcCChhhHH
Q 026555 17 LNSRRVKLFTCSWIPQNQEPKALIFICHGYAMECS---IGMNSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDDLV 93 (237)
Q Consensus 17 ~~~~g~~l~~~~~~~~~~~~~~~iv~~hG~~~~~~---~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~ 93 (237)
.+.||.+|.+..+.|...++.|+||++||++.+.. .+.......|.++||.|+++|+||+|.|.+.... .. ...+
T Consensus 2 ~~~DG~~L~~~~~~P~~~~~~P~Il~~~gyg~~~~~~~~~~~~~~~~l~~~Gy~vv~~D~RG~g~S~g~~~~-~~-~~~~ 79 (550)
T TIGR00976 2 PMRDGTRLAIDVYRPAGGGPVPVILSRTPYGKDAGLRWGLDKTEPAWFVAQGYAVVIQDTRGRGASEGEFDL-LG-SDEA 79 (550)
T ss_pred cCCCCCEEEEEEEecCCCCCCCEEEEecCCCCchhhccccccccHHHHHhCCcEEEEEeccccccCCCceEe-cC-cccc
Confidence 46799999999999876567899999999997653 1212356788899999999999999999876433 22 5678
Q ss_pred HHHHHHHHHHHhhhhcCCceEEEEEeccchHHHHHHHhcCCCcccEEEEcCCcccccc
Q 026555 94 DDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKIAE 151 (237)
Q Consensus 94 ~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~~~~vl~~~~~~~~~ 151 (237)
+|+.++++++.++. ....++.++|+|+||.+++.+|..+|+.++++|..++..+...
T Consensus 80 ~D~~~~i~~l~~q~-~~~~~v~~~G~S~GG~~a~~~a~~~~~~l~aiv~~~~~~d~~~ 136 (550)
T TIGR00976 80 ADGYDLVDWIAKQP-WCDGNVGMLGVSYLAVTQLLAAVLQPPALRAIAPQEGVWDLYR 136 (550)
T ss_pred hHHHHHHHHHHhCC-CCCCcEEEEEeChHHHHHHHHhccCCCceeEEeecCcccchhH
Confidence 99999999984332 2346999999999999999999999999999999988876654
No 54
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.77 E-value=5.9e-18 Score=125.61 Aligned_cols=131 Identities=18% Similarity=0.206 Sum_probs=106.7
Q ss_pred cccceeEeecCCcEEEEEEeecCCCCCcEEEEEEcCCCCCCcCchHHHHHHHHh-cCCEEEEeecCCCCCCCCCCCCcCC
Q 026555 10 KYDEEFILNSRRVKLFTCSWIPQNQEPKALIFICHGYAMECSIGMNSTAIRLAN-EGYACYGIDYQGHGKSAGLSGYIDN 88 (237)
Q Consensus 10 ~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~iv~~hG~~~~~~~~~~~~~~~l~~-~g~~v~~~d~~g~G~s~~~~~~~~~ 88 (237)
..+.....+..|..+....+.|+. ...++++++||...+...- ..+...|.. .+++++.+|++|+|.|.+...
T Consensus 34 ~v~v~~~~t~rgn~~~~~y~~~~~-~~~~~lly~hGNa~Dlgq~-~~~~~~l~~~ln~nv~~~DYSGyG~S~G~ps---- 107 (258)
T KOG1552|consen 34 FVEVFKVKTSRGNEIVCMYVRPPE-AAHPTLLYSHGNAADLGQM-VELFKELSIFLNCNVVSYDYSGYGRSSGKPS---- 107 (258)
T ss_pred ccceEEeecCCCCEEEEEEEcCcc-ccceEEEEcCCcccchHHH-HHHHHHHhhcccceEEEEecccccccCCCcc----
Confidence 344566778889998888888875 4568999999997776633 456666655 379999999999999998744
Q ss_pred hhhHHHHHHHHHHHHHhhhhc-CCceEEEEEeccchHHHHHHHhcCCCcccEEEEcCCccccc
Q 026555 89 FDDLVDDCFNHFTSICEKEEN-KEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKIA 150 (237)
Q Consensus 89 ~~~~~~d~~~~~~~~~~~~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~~~~~~vl~~~~~~~~ 150 (237)
-.+..+|+.++.+++ ++.. ..++++++|+|+|...++.+|.+.| ++++||.+|....-
T Consensus 108 E~n~y~Di~avye~L--r~~~g~~~~Iil~G~SiGt~~tv~Lasr~~--~~alVL~SPf~S~~ 166 (258)
T KOG1552|consen 108 ERNLYADIKAVYEWL--RNRYGSPERIILYGQSIGTVPTVDLASRYP--LAAVVLHSPFTSGM 166 (258)
T ss_pred cccchhhHHHHHHHH--HhhcCCCceEEEEEecCCchhhhhHhhcCC--cceEEEeccchhhh
Confidence 347788999999999 4444 5799999999999999999999998 99999999887654
No 55
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=99.76 E-value=3.8e-18 Score=106.69 Aligned_cols=79 Identities=42% Similarity=0.708 Sum_probs=72.3
Q ss_pred CcEEEEEEeecCCCCCcEEEEEEcCCCCCCcCchHHHHHHHHhcCCEEEEeecCCCCCCCCCCCCcCChhhHHHHHHHHH
Q 026555 21 RVKLFTCSWIPQNQEPKALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHF 100 (237)
Q Consensus 21 g~~l~~~~~~~~~~~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~d~~~~~ 100 (237)
|.+|.++.|.|++. ++.+|+++||+++++..| ..++..|+++||.|+++|+||||.|.+......+++++++|+..++
T Consensus 1 G~~L~~~~w~p~~~-~k~~v~i~HG~~eh~~ry-~~~a~~L~~~G~~V~~~D~rGhG~S~g~rg~~~~~~~~v~D~~~~~ 78 (79)
T PF12146_consen 1 GTKLFYRRWKPENP-PKAVVVIVHGFGEHSGRY-AHLAEFLAEQGYAVFAYDHRGHGRSEGKRGHIDSFDDYVDDLHQFI 78 (79)
T ss_pred CcEEEEEEecCCCC-CCEEEEEeCCcHHHHHHH-HHHHHHHHhCCCEEEEECCCcCCCCCCcccccCCHHHHHHHHHHHh
Confidence 67899999999863 799999999999999977 9999999999999999999999999987777789999999999886
Q ss_pred H
Q 026555 101 T 101 (237)
Q Consensus 101 ~ 101 (237)
+
T Consensus 79 ~ 79 (79)
T PF12146_consen 79 Q 79 (79)
T ss_pred C
Confidence 3
No 56
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=99.75 E-value=6.1e-17 Score=128.42 Aligned_cols=139 Identities=15% Similarity=0.154 Sum_probs=109.2
Q ss_pred ccCccccceeEeecCCcEEEEEEeecCCC------CCcEEEEEEcCCCCCCc-CchHHHHHHHHhcCCEEEEeecCCCCC
Q 026555 6 DHNIKYDEEFILNSRRVKLFTCSWIPQNQ------EPKALIFICHGYAMECS-IGMNSTAIRLANEGYACYGIDYQGHGK 78 (237)
Q Consensus 6 ~~~~~~~~~~~~~~~g~~l~~~~~~~~~~------~~~~~iv~~hG~~~~~~-~~~~~~~~~l~~~g~~v~~~d~~g~G~ 78 (237)
...+.++.+.+...||..+.+....+..+ +..|+||++||+.+++. .|++.++....+.||+|++++.||+|.
T Consensus 88 ~p~~~y~Reii~~~DGG~~~lDW~~~~~~~~~~~~~~~P~vvilpGltg~S~~~YVr~lv~~a~~~G~r~VVfN~RG~~g 167 (409)
T KOG1838|consen 88 KPPVEYTREIIKTSDGGTVTLDWVENPDSRCRTDDGTDPIVVILPGLTGGSHESYVRHLVHEAQRKGYRVVVFNHRGLGG 167 (409)
T ss_pred CCCCcceeEEEEeCCCCEEEEeeccCcccccCCCCCCCcEEEEecCCCCCChhHHHHHHHHHHHhCCcEEEEECCCCCCC
Confidence 34567888999999999999988866543 35699999999976555 577888999999999999999999998
Q ss_pred CCCCCCCcCChhhHHHHHHHHHHHHHhhhhcCCceEEEEEeccchHHHHHHHhcCCC---cccEEEEcCCcc
Q 026555 79 SAGLSGYIDNFDDLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPD---YFDGAVLVAPMC 147 (237)
Q Consensus 79 s~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~---~~~~~vl~~~~~ 147 (237)
+.-..+..++ ..+.+|+.++++++ ++.....+...+|.||||++.+.|..+-.+ .+.++.+.+|.-
T Consensus 168 ~~LtTpr~f~-ag~t~Dl~~~v~~i--~~~~P~a~l~avG~S~Gg~iL~nYLGE~g~~~~l~~a~~v~~Pwd 236 (409)
T KOG1838|consen 168 SKLTTPRLFT-AGWTEDLREVVNHI--KKRYPQAPLFAVGFSMGGNILTNYLGEEGDNTPLIAAVAVCNPWD 236 (409)
T ss_pred CccCCCceee-cCCHHHHHHHHHHH--HHhCCCCceEEEEecchHHHHHHHhhhccCCCCceeEEEEeccch
Confidence 8755444333 35578999999999 777788899999999999999999876432 344555555544
No 57
>PRK10566 esterase; Provisional
Probab=99.71 E-value=2.6e-16 Score=121.33 Aligned_cols=108 Identities=20% Similarity=0.168 Sum_probs=80.8
Q ss_pred CCcEEEEEEcCCCCCCcCchHHHHHHHHhcCCEEEEeecCCCCCCCCCCCCcCCh-------hhHHHHHHHHHHHHHhhh
Q 026555 35 EPKALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNF-------DDLVDDCFNHFTSICEKE 107 (237)
Q Consensus 35 ~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~-------~~~~~d~~~~~~~~~~~~ 107 (237)
++.|+||++||++++...| ..+++.|.+.||+|+++|+||||.+...... ..+ .+.++|+.++++++.++.
T Consensus 25 ~~~p~vv~~HG~~~~~~~~-~~~~~~l~~~G~~v~~~d~~g~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 102 (249)
T PRK10566 25 TPLPTVFFYHGFTSSKLVY-SYFAVALAQAGFRVIMPDAPMHGARFSGDEA-RRLNHFWQILLQNMQEFPTLRAAIREEG 102 (249)
T ss_pred CCCCEEEEeCCCCcccchH-HHHHHHHHhCCCEEEEecCCcccccCCCccc-cchhhHHHHHHHHHHHHHHHHHHHHhcC
Confidence 3468999999999888766 8899999999999999999999976422111 111 233567777787774433
Q ss_pred hcCCceEEEEEeccchHHHHHHHhcCCCcccEEEEcC
Q 026555 108 ENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVA 144 (237)
Q Consensus 108 ~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~~~~vl~~ 144 (237)
..+.+++.++|||+||.+++.++.++|+....+++.+
T Consensus 103 ~~~~~~i~v~G~S~Gg~~al~~~~~~~~~~~~~~~~~ 139 (249)
T PRK10566 103 WLLDDRLAVGGASMGGMTALGIMARHPWVKCVASLMG 139 (249)
T ss_pred CcCccceeEEeecccHHHHHHHHHhCCCeeEEEEeeC
Confidence 3467899999999999999999998887444444443
No 58
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=99.71 E-value=1.6e-16 Score=118.55 Aligned_cols=118 Identities=19% Similarity=0.263 Sum_probs=94.2
Q ss_pred EEEEEEeecCCCCCcEEEEEEcCCCCCCcCchHHHHHHHHhc-CCEEEEeecCCCCCCCCCCCCcCChhhHHHHHHHHHH
Q 026555 23 KLFTCSWIPQNQEPKALIFICHGYAMECSIGMNSTAIRLANE-GYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFT 101 (237)
Q Consensus 23 ~l~~~~~~~~~~~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~-g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~d~~~~~~ 101 (237)
++..+...|.. +..|+++++||.|.+.-.| ..++..+... ..+|+++|+||||.|........+.+.+++|+.++++
T Consensus 61 t~n~Y~t~~~~-t~gpil~l~HG~G~S~LSf-A~~a~el~s~~~~r~~a~DlRgHGeTk~~~e~dlS~eT~~KD~~~~i~ 138 (343)
T KOG2564|consen 61 TFNVYLTLPSA-TEGPILLLLHGGGSSALSF-AIFASELKSKIRCRCLALDLRGHGETKVENEDDLSLETMSKDFGAVIK 138 (343)
T ss_pred eEEEEEecCCC-CCccEEEEeecCcccchhH-HHHHHHHHhhcceeEEEeeccccCccccCChhhcCHHHHHHHHHHHHH
Confidence 46655555643 5678999999999988877 8888888765 5788999999999998766665788999999999999
Q ss_pred HHHhhhhcCCceEEEEEeccchHHHHHHHhc--CCCcccEEEEcCCc
Q 026555 102 SICEKEENKEKMRYLLGESMGGAMVLLLHRK--KPDYFDGAVLVAPM 146 (237)
Q Consensus 102 ~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~--~p~~~~~~vl~~~~ 146 (237)
.+ ... ...+++++||||||.||.+.|.. -|. +.|++.+.-.
T Consensus 139 ~~--fge-~~~~iilVGHSmGGaIav~~a~~k~lps-l~Gl~viDVV 181 (343)
T KOG2564|consen 139 EL--FGE-LPPQIILVGHSMGGAIAVHTAASKTLPS-LAGLVVIDVV 181 (343)
T ss_pred HH--hcc-CCCceEEEeccccchhhhhhhhhhhchh-hhceEEEEEe
Confidence 88 322 46789999999999999887764 465 8888887543
No 59
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=99.70 E-value=1.5e-16 Score=129.24 Aligned_cols=123 Identities=15% Similarity=0.069 Sum_probs=94.2
Q ss_pred CcEEEEEEeecCCCCCcEEEEEEcCCCCCCc------------CchHHHH---HHHHhcCCEEEEeecCCCCCCC-----
Q 026555 21 RVKLFTCSWIPQNQEPKALIFICHGYAMECS------------IGMNSTA---IRLANEGYACYGIDYQGHGKSA----- 80 (237)
Q Consensus 21 g~~l~~~~~~~~~~~~~~~iv~~hG~~~~~~------------~~~~~~~---~~l~~~g~~v~~~d~~g~G~s~----- 80 (237)
..+|.|..|+..+....++||++|++.++++ .|+..+. +.|--..|-|+++|..|-|.|+
T Consensus 40 ~~~~~Y~t~G~ln~~~~n~vlv~h~~tg~~h~~~~~~~~~~~~gww~~~iG~g~~lDt~~yfvi~~n~lG~~~~~~p~~g 119 (389)
T PRK06765 40 DVQMGYETYGTLNRAKSNVILITHYFSATSHAAGKYTADDEESGYWDGLIGPGKAIDTNKYFVISTDTLCNVQVKDPNVI 119 (389)
T ss_pred CceEEEEeccccCCCCCCEEEEeCCCCCchhhcccccccCCCcccHHhccCCCCCcCCCceEEEEecccCCCcCCCCCCC
Confidence 4689999998776555689999999988642 2334443 2333335999999999876421
Q ss_pred --C-----C--------CCCcCChhhHHHHHHHHHHHHHhhhhcCCceEE-EEEeccchHHHHHHHhcCCCcccEEEEcC
Q 026555 81 --G-----L--------SGYIDNFDDLVDDCFNHFTSICEKEENKEKMRY-LLGESMGGAMVLLLHRKKPDYFDGAVLVA 144 (237)
Q Consensus 81 --~-----~--------~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~-l~G~S~Gg~~a~~~a~~~p~~~~~~vl~~ 144 (237)
+ + ....+++.++++++.++++.+ +.+++. ++||||||++++.+|.++|++++++|+++
T Consensus 120 ~tgp~s~~p~tg~~~~~~fP~~t~~d~~~~~~~ll~~l------gi~~~~~vvG~SmGG~ial~~a~~~P~~v~~lv~ia 193 (389)
T PRK06765 120 TTGPASINPKTGKPYGMDFPVVTILDFVRVQKELIKSL------GIARLHAVMGPSMGGMQAQEWAVHYPHMVERMIGVI 193 (389)
T ss_pred CCCCCCCCcCCCCccCCCCCcCcHHHHHHHHHHHHHHc------CCCCceEEEEECHHHHHHHHHHHHChHhhheEEEEe
Confidence 0 0 112357888899999999888 888886 99999999999999999999999999998
Q ss_pred Ccccc
Q 026555 145 PMCKI 149 (237)
Q Consensus 145 ~~~~~ 149 (237)
+....
T Consensus 194 ~~~~~ 198 (389)
T PRK06765 194 GNPQN 198 (389)
T ss_pred cCCCC
Confidence 77654
No 60
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=99.70 E-value=9.7e-18 Score=119.36 Aligned_cols=125 Identities=14% Similarity=0.146 Sum_probs=94.9
Q ss_pred eecCCcEEEEEEeecCCCCCcEEEEEEcCCCCCCcCchHHHHHHHHhc-CCEEEEeecCCCCCCCCCCCCc--CChhhHH
Q 026555 17 LNSRRVKLFTCSWIPQNQEPKALIFICHGYAMECSIGMNSTAIRLANE-GYACYGIDYQGHGKSAGLSGYI--DNFDDLV 93 (237)
Q Consensus 17 ~~~~g~~l~~~~~~~~~~~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~-g~~v~~~d~~g~G~s~~~~~~~--~~~~~~~ 93 (237)
...+|+.+.|..++.. ...|++++|.-++...-|.+....+-+. -+.++++|.||+|.|..+.... ..+..-+
T Consensus 26 v~vng~ql~y~~~G~G----~~~iLlipGalGs~~tDf~pql~~l~k~l~~TivawDPpGYG~SrPP~Rkf~~~ff~~Da 101 (277)
T KOG2984|consen 26 VHVNGTQLGYCKYGHG----PNYILLIPGALGSYKTDFPPQLLSLFKPLQVTIVAWDPPGYGTSRPPERKFEVQFFMKDA 101 (277)
T ss_pred eeecCceeeeeecCCC----CceeEecccccccccccCCHHHHhcCCCCceEEEEECCCCCCCCCCCcccchHHHHHHhH
Confidence 3558999999998644 3358999998777664436555554443 4899999999999998554331 1233335
Q ss_pred HHHHHHHHHHHhhhhcCCceEEEEEeccchHHHHHHHhcCCCcccEEEEcCCcccccc
Q 026555 94 DDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKIAE 151 (237)
Q Consensus 94 ~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~~~~vl~~~~~~~~~ 151 (237)
++...+++.+ ..+++.++|||-||..|+..|+++++.|.++|+.+.......
T Consensus 102 ~~avdLM~aL------k~~~fsvlGWSdGgiTalivAak~~e~v~rmiiwga~ayvn~ 153 (277)
T KOG2984|consen 102 EYAVDLMEAL------KLEPFSVLGWSDGGITALIVAAKGKEKVNRMIIWGAAAYVNH 153 (277)
T ss_pred HHHHHHHHHh------CCCCeeEeeecCCCeEEEEeeccChhhhhhheeecccceecc
Confidence 5666677777 789999999999999999999999999999999988877653
No 61
>PLN02872 triacylglycerol lipase
Probab=99.68 E-value=1.5e-16 Score=129.29 Aligned_cols=141 Identities=18% Similarity=0.214 Sum_probs=107.2
Q ss_pred cCccccceeEeecCCcEEEEEEeecCC----CCCcEEEEEEcCCCCCCcCch-----HHHHHHHHhcCCEEEEeecCCCC
Q 026555 7 HNIKYDEEFILNSRRVKLFTCSWIPQN----QEPKALIFICHGYAMECSIGM-----NSTAIRLANEGYACYGIDYQGHG 77 (237)
Q Consensus 7 ~~~~~~~~~~~~~~g~~l~~~~~~~~~----~~~~~~iv~~hG~~~~~~~~~-----~~~~~~l~~~g~~v~~~d~~g~G 77 (237)
.+++.++..+.+.||..|...+..+.. ...+|+|+++||++.++..|. ..++..|++.||+|+.+|+||++
T Consensus 40 ~gy~~e~h~v~T~DGy~L~l~ri~~~~~~~~~~~~~~Vll~HGl~~ss~~w~~~~~~~sla~~La~~GydV~l~n~RG~~ 119 (395)
T PLN02872 40 AGYSCTEHTIQTKDGYLLALQRVSSRNPRLGSQRGPPVLLQHGLFMAGDAWFLNSPEQSLGFILADHGFDVWVGNVRGTR 119 (395)
T ss_pred cCCCceEEEEECCCCcEEEEEEcCCCCCCCCCCCCCeEEEeCcccccccceeecCcccchHHHHHhCCCCcccccccccc
Confidence 467778888999999999988874332 123678999999988887662 35667888999999999999988
Q ss_pred CCCCCC------CC--cCChhhHH-HHHHHHHHHHHhhhhcCCceEEEEEeccchHHHHHHHhcCCC---cccEEEEcCC
Q 026555 78 KSAGLS------GY--IDNFDDLV-DDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPD---YFDGAVLVAP 145 (237)
Q Consensus 78 ~s~~~~------~~--~~~~~~~~-~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~---~~~~~vl~~~ 145 (237)
.|.+.. .. .+++++++ .|+.++++++++ . ..++++++||||||.+++.++ .+|+ .|+.+++++|
T Consensus 120 ~s~gh~~~~~~~~~fw~~s~~e~a~~Dl~a~id~i~~--~-~~~~v~~VGhS~Gg~~~~~~~-~~p~~~~~v~~~~~l~P 195 (395)
T PLN02872 120 WSYGHVTLSEKDKEFWDWSWQELALYDLAEMIHYVYS--I-TNSKIFIVGHSQGTIMSLAAL-TQPNVVEMVEAAALLCP 195 (395)
T ss_pred cccCCCCCCccchhccCCcHHHHHHHHHHHHHHHHHh--c-cCCceEEEEECHHHHHHHHHh-hChHHHHHHHHHHHhcc
Confidence 664311 10 24677777 799999999843 2 247999999999999998555 5676 5888899988
Q ss_pred cccccc
Q 026555 146 MCKIAE 151 (237)
Q Consensus 146 ~~~~~~ 151 (237)
......
T Consensus 196 ~~~~~~ 201 (395)
T PLN02872 196 ISYLDH 201 (395)
T ss_pred hhhhcc
Confidence 876643
No 62
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.67 E-value=2.6e-15 Score=115.49 Aligned_cols=122 Identities=25% Similarity=0.304 Sum_probs=100.5
Q ss_pred cEEEEEEe-ecCCCCCcEEEEEEcCCCCCCcCchHHHHHHHHhc-CCEEEEeecCCCCCCCCCCCCcCChhhHHHHHHHH
Q 026555 22 VKLFTCSW-IPQNQEPKALIFICHGYAMECSIGMNSTAIRLANE-GYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNH 99 (237)
Q Consensus 22 ~~l~~~~~-~~~~~~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~-g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~d~~~~ 99 (237)
.++.|..+ ...+....|+++++||+.++...| +.+.+.|++. +-.+++.|.|.||.|+..... +...+++|+..+
T Consensus 36 ~~l~y~~~~~~~~~~~~Pp~i~lHGl~GS~~Nw-~sv~k~Ls~~l~~~v~~vd~RnHG~Sp~~~~h--~~~~ma~dv~~F 112 (315)
T KOG2382|consen 36 VRLAYDSVYSSENLERAPPAIILHGLLGSKENW-RSVAKNLSRKLGRDVYAVDVRNHGSSPKITVH--NYEAMAEDVKLF 112 (315)
T ss_pred cccceeeeecccccCCCCceEEecccccCCCCH-HHHHHHhcccccCceEEEecccCCCCcccccc--CHHHHHHHHHHH
Confidence 56777776 344435679999999999999999 9999999886 778999999999999876554 688999999999
Q ss_pred HHHHHhhhhcCCceEEEEEeccch-HHHHHHHhcCCCcccEEEEcCCccc
Q 026555 100 FTSICEKEENKEKMRYLLGESMGG-AMVLLLHRKKPDYFDGAVLVAPMCK 148 (237)
Q Consensus 100 ~~~~~~~~~~~~~~~~l~G~S~Gg-~~a~~~a~~~p~~~~~~vl~~~~~~ 148 (237)
++.. .......++.++|||||| .+++..+..+|+.+.++|++.-.+.
T Consensus 113 i~~v--~~~~~~~~~~l~GHsmGG~~~~m~~t~~~p~~~~rliv~D~sP~ 160 (315)
T KOG2382|consen 113 IDGV--GGSTRLDPVVLLGHSMGGVKVAMAETLKKPDLIERLIVEDISPG 160 (315)
T ss_pred HHHc--ccccccCCceecccCcchHHHHHHHHHhcCcccceeEEEecCCc
Confidence 9988 322346789999999999 7778888889999999999754443
No 63
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=99.67 E-value=1.5e-15 Score=123.58 Aligned_cols=113 Identities=11% Similarity=0.040 Sum_probs=86.4
Q ss_pred CcEEEEEEcCCCCCC--cCchHHHHHHHHh--cCCEEEEeecCCCCCCCCCCCCcCChhhHHHHHHHHHHHHHhhhhcCC
Q 026555 36 PKALIFICHGYAMEC--SIGMNSTAIRLAN--EGYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEKEENKE 111 (237)
Q Consensus 36 ~~~~iv~~hG~~~~~--~~~~~~~~~~l~~--~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 111 (237)
.+|++|++||++.+. ..|...+.+.|.. ..|+|+++|++|+|.+...... .......+++.++++.+......+.
T Consensus 40 ~~ptvIlIHG~~~s~~~~~w~~~l~~al~~~~~d~nVI~VDw~g~g~s~y~~a~-~~t~~vg~~la~lI~~L~~~~gl~l 118 (442)
T TIGR03230 40 ETKTFIVIHGWTVTGMFESWVPKLVAALYEREPSANVIVVDWLSRAQQHYPTSA-AYTKLVGKDVAKFVNWMQEEFNYPW 118 (442)
T ss_pred CCCeEEEECCCCcCCcchhhHHHHHHHHHhccCCCEEEEEECCCcCCCCCcccc-ccHHHHHHHHHHHHHHHHHhhCCCC
Confidence 478999999998764 2353446666543 2599999999999987643222 2335667788888888743333457
Q ss_pred ceEEEEEeccchHHHHHHHhcCCCcccEEEEcCCcccc
Q 026555 112 KMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKI 149 (237)
Q Consensus 112 ~~~~l~G~S~Gg~~a~~~a~~~p~~~~~~vl~~~~~~~ 149 (237)
++++++||||||.+|..++...|++|.++++++|....
T Consensus 119 ~~VhLIGHSLGAhIAg~ag~~~p~rV~rItgLDPAgP~ 156 (442)
T TIGR03230 119 DNVHLLGYSLGAHVAGIAGSLTKHKVNRITGLDPAGPT 156 (442)
T ss_pred CcEEEEEECHHHHHHHHHHHhCCcceeEEEEEcCCCCc
Confidence 89999999999999999999999999999999987544
No 64
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=99.66 E-value=7.9e-16 Score=119.80 Aligned_cols=114 Identities=11% Similarity=0.119 Sum_probs=85.6
Q ss_pred CcEEEEEEcCCCCCC-cCchHHHHHHHHh-cCCEEEEeecCCCCCCCCCCCCcCChhhHHHHHHHHHHHHHhhhhcCCce
Q 026555 36 PKALIFICHGYAMEC-SIGMNSTAIRLAN-EGYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEKEENKEKM 113 (237)
Q Consensus 36 ~~~~iv~~hG~~~~~-~~~~~~~~~~l~~-~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 113 (237)
.+|++|++||+.++. ..|...+.+.+.+ .+|+|+++|+++++.+... ....+.....+++.++++.+.+....+.++
T Consensus 35 ~~p~vilIHG~~~~~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~y~-~a~~~~~~v~~~la~~l~~L~~~~g~~~~~ 113 (275)
T cd00707 35 SRPTRFIIHGWTSSGEESWISDLRKAYLSRGDYNVIVVDWGRGANPNYP-QAVNNTRVVGAELAKFLDFLVDNTGLSLEN 113 (275)
T ss_pred CCCcEEEEcCCCCCCCCcHHHHHHHHHHhcCCCEEEEEECccccccChH-HHHHhHHHHHHHHHHHHHHHHHhcCCChHH
Confidence 467899999999887 5565566665544 5799999999988433211 111244555678888888884332345679
Q ss_pred EEEEEeccchHHHHHHHhcCCCcccEEEEcCCccccc
Q 026555 114 RYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKIA 150 (237)
Q Consensus 114 ~~l~G~S~Gg~~a~~~a~~~p~~~~~~vl~~~~~~~~ 150 (237)
++++||||||.+|..++.++|++++++++++|.....
T Consensus 114 i~lIGhSlGa~vAg~~a~~~~~~v~~iv~LDPa~p~f 150 (275)
T cd00707 114 VHLIGHSLGAHVAGFAGKRLNGKLGRITGLDPAGPLF 150 (275)
T ss_pred EEEEEecHHHHHHHHHHHHhcCccceeEEecCCcccc
Confidence 9999999999999999999999999999998876543
No 65
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.66 E-value=1.3e-15 Score=114.54 Aligned_cols=122 Identities=18% Similarity=0.216 Sum_probs=87.6
Q ss_pred EEeecCC-CCCcEEEEEEcCCCCCCcCchH--HHHHHHHhcCCEEEEeecCCCCCCCCCCCC-----cCChhhHHHHHHH
Q 026555 27 CSWIPQN-QEPKALIFICHGYAMECSIGMN--STAIRLANEGYACYGIDYQGHGKSAGLSGY-----IDNFDDLVDDCFN 98 (237)
Q Consensus 27 ~~~~~~~-~~~~~~iv~~hG~~~~~~~~~~--~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~-----~~~~~~~~~d~~~ 98 (237)
+.|.|.+ .++.|+||++||.+.+...+.. .+...+.+.||.|+++|.+|++.+...... .........++.+
T Consensus 2 ~ly~P~~~~~~~P~vv~lHG~~~~~~~~~~~~~~~~~a~~~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (212)
T TIGR01840 2 YVYVPAGLTGPRALVLALHGCGQTASAYVIDWGWKAAADRYGFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVESLHQ 81 (212)
T ss_pred EEEcCCCCCCCCCEEEEeCCCCCCHHHHhhhcChHHHHHhCCeEEEecCCcCccccCCCCCCCCccccCCCCccHHHHHH
Confidence 4566654 2567999999999987665411 345555567999999999998754321100 0011234667788
Q ss_pred HHHHHHhhhhcCCceEEEEEeccchHHHHHHHhcCCCcccEEEEcCCccc
Q 026555 99 HFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCK 148 (237)
Q Consensus 99 ~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~~~~vl~~~~~~ 148 (237)
+++.+.++...+.++++++|||+||.+++.++.++|+.+++++.+++...
T Consensus 82 ~i~~~~~~~~id~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~g~~~ 131 (212)
T TIGR01840 82 LIDAVKANYSIDPNRVYVTGLSAGGGMTAVLGCTYPDVFAGGASNAGLPY 131 (212)
T ss_pred HHHHHHHhcCcChhheEEEEECHHHHHHHHHHHhCchhheEEEeecCCcc
Confidence 88888554444567999999999999999999999999999988876653
No 66
>PLN00021 chlorophyllase
Probab=99.62 E-value=5.4e-15 Score=116.76 Aligned_cols=119 Identities=16% Similarity=0.164 Sum_probs=88.4
Q ss_pred cEEEEEEeecCCCCCcEEEEEEcCCCCCCcCchHHHHHHHHhcCCEEEEeecCCCCCCCCCCCCcCChhhHHHHHHHHHH
Q 026555 22 VKLFTCSWIPQNQEPKALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFT 101 (237)
Q Consensus 22 ~~l~~~~~~~~~~~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~d~~~~~~ 101 (237)
..+.+..+.|...+..|+||++||++.+...| ..+++.|+++||.|+++|++|++.+.. ...+++..++++
T Consensus 37 ~~~p~~v~~P~~~g~~PvVv~lHG~~~~~~~y-~~l~~~Las~G~~VvapD~~g~~~~~~--------~~~i~d~~~~~~ 107 (313)
T PLN00021 37 PPKPLLVATPSEAGTYPVLLFLHGYLLYNSFY-SQLLQHIASHGFIVVAPQLYTLAGPDG--------TDEIKDAAAVIN 107 (313)
T ss_pred CCceEEEEeCCCCCCCCEEEEECCCCCCcccH-HHHHHHHHhCCCEEEEecCCCcCCCCc--------hhhHHHHHHHHH
Confidence 45677788887656779999999999988866 899999999999999999998653221 111233344444
Q ss_pred HHHhh--------hhcCCceEEEEEeccchHHHHHHHhcCCC-----cccEEEEcCCcccc
Q 026555 102 SICEK--------EENKEKMRYLLGESMGGAMVLLLHRKKPD-----YFDGAVLVAPMCKI 149 (237)
Q Consensus 102 ~~~~~--------~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~-----~~~~~vl~~~~~~~ 149 (237)
++.+. ...+.++++++|||+||.+++.+|..+++ .+.++|+++|....
T Consensus 108 ~l~~~l~~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv~g~ 168 (313)
T PLN00021 108 WLSSGLAAVLPEGVRPDLSKLALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPVDGT 168 (313)
T ss_pred HHHhhhhhhcccccccChhheEEEEECcchHHHHHHHhhccccccccceeeEEeecccccc
Confidence 43211 12345789999999999999999988874 58999999887654
No 67
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=99.62 E-value=2.4e-15 Score=108.41 Aligned_cols=144 Identities=18% Similarity=0.235 Sum_probs=118.8
Q ss_pred cccccCccccceeEeecCCcEEEEEEeecCCCCCcEEEEEEcCCCCCCcCchHHHHHHHH-hcCCEEEEeecCCCCCCCC
Q 026555 3 SEIDHNIKYDEEFILNSRRVKLFTCSWIPQNQEPKALIFICHGYAMECSIGMNSTAIRLA-NEGYACYGIDYQGHGKSAG 81 (237)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~iv~~hG~~~~~~~~~~~~~~~l~-~~g~~v~~~d~~g~G~s~~ 81 (237)
.+...++++++..+.+.|..++.-+....+ ...|+++++|+-.++.+-. -..++.+. +.+.+|+.+++||+|.|.+
T Consensus 46 tP~~~n~pye~i~l~T~D~vtL~a~~~~~E--~S~pTlLyfh~NAGNmGhr-~~i~~~fy~~l~mnv~ivsYRGYG~S~G 122 (300)
T KOG4391|consen 46 TPKEFNMPYERIELRTRDKVTLDAYLMLSE--SSRPTLLYFHANAGNMGHR-LPIARVFYVNLKMNVLIVSYRGYGKSEG 122 (300)
T ss_pred CccccCCCceEEEEEcCcceeEeeeeeccc--CCCceEEEEccCCCcccch-hhHHHHHHHHcCceEEEEEeeccccCCC
Confidence 345667788888889999999887777633 5789999999999988855 45555544 4489999999999999998
Q ss_pred CCCCcCChhhHHHHHHHHHHHHHhhhhcCCceEEEEEeccchHHHHHHHhcCCCcccEEEEcCCcccccccc
Q 026555 82 LSGYIDNFDDLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKIAENV 153 (237)
Q Consensus 82 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~~~~vl~~~~~~~~~~~ 153 (237)
.. +.+.+.-|..++++++-++...+..+++++|-|+||.+|+.+|+++.+++.++|+-++...++..+
T Consensus 123 sp----sE~GL~lDs~avldyl~t~~~~dktkivlfGrSlGGAvai~lask~~~ri~~~ivENTF~SIp~~~ 190 (300)
T KOG4391|consen 123 SP----SEEGLKLDSEAVLDYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSDRISAIIVENTFLSIPHMA 190 (300)
T ss_pred Cc----cccceeccHHHHHHHHhcCccCCcceEEEEecccCCeeEEEeeccchhheeeeeeechhccchhhh
Confidence 73 556777789999999977777788999999999999999999999999999999999888775433
No 68
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=99.61 E-value=3.7e-15 Score=116.31 Aligned_cols=129 Identities=18% Similarity=0.201 Sum_probs=97.6
Q ss_pred CCcEEEEEEeec--CCCCCcEEEEEEcCCCCCCcCchHHH---------HHHHHhcCCEEEEeecCCCCCCCCCCCCcCC
Q 026555 20 RRVKLFTCSWIP--QNQEPKALIFICHGYAMECSIGMNST---------AIRLANEGYACYGIDYQGHGKSAGLSGYIDN 88 (237)
Q Consensus 20 ~g~~l~~~~~~~--~~~~~~~~iv~~hG~~~~~~~~~~~~---------~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~ 88 (237)
||++|....|.| ..+++.|+||..|+++.......... ...|.++||.|+..|.||.|.|.+.....
T Consensus 1 DGv~L~adv~~P~~~~~~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~vV~~D~RG~g~S~G~~~~~-- 78 (272)
T PF02129_consen 1 DGVRLAADVYRPGADGGGPFPVILTRTPYGKGDQTASDLAGANPGPPSARRPFAERGYAVVVQDVRGTGGSEGEFDPM-- 78 (272)
T ss_dssp TS-EEEEEEEEE--TTSSSEEEEEEEESSTCTC-HHHHHHTTCHHSHGGGHHHHHTT-EEEEEE-TTSTTS-S-B-TT--
T ss_pred CCCEEEEEEEecCCCCCCcccEEEEccCcCCCCCcccchhhhhcccchhHHHHHhCCCEEEEECCcccccCCCccccC--
Confidence 799999999999 66678899999999996542110111 12288999999999999999999875442
Q ss_pred hhhHHHHHHHHHHHHHhhhhcCCceEEEEEeccchHHHHHHHhcCCCcccEEEEcCCcccccc
Q 026555 89 FDDLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKIAE 151 (237)
Q Consensus 89 ~~~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~~~~vl~~~~~~~~~ 151 (237)
..+-.+|..++|+++..+ .....+|.++|.|.+|..++..|...|..+++++...+..+...
T Consensus 79 ~~~e~~D~~d~I~W~~~Q-pws~G~VGm~G~SY~G~~q~~~A~~~~p~LkAi~p~~~~~d~~~ 140 (272)
T PF02129_consen 79 SPNEAQDGYDTIEWIAAQ-PWSNGKVGMYGISYGGFTQWAAAARRPPHLKAIVPQSGWSDLYR 140 (272)
T ss_dssp SHHHHHHHHHHHHHHHHC-TTEEEEEEEEEETHHHHHHHHHHTTT-TTEEEEEEESE-SBTCC
T ss_pred ChhHHHHHHHHHHHHHhC-CCCCCeEEeeccCHHHHHHHHHHhcCCCCceEEEecccCCcccc
Confidence 556688999999999543 44557999999999999999999988889999999988887765
No 69
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.60 E-value=2.6e-14 Score=111.71 Aligned_cols=129 Identities=20% Similarity=0.243 Sum_probs=88.6
Q ss_pred ecCCcEEEEEEeecCC--CCCcEEEEEEcCCCCCCcCchH-HHHHHH-HhcCCEEEEeec--CCCCCCCCCC--------
Q 026555 18 NSRRVKLFTCSWIPQN--QEPKALIFICHGYAMECSIGMN-STAIRL-ANEGYACYGIDY--QGHGKSAGLS-------- 83 (237)
Q Consensus 18 ~~~g~~l~~~~~~~~~--~~~~~~iv~~hG~~~~~~~~~~-~~~~~l-~~~g~~v~~~d~--~g~G~s~~~~-------- 83 (237)
..-+.++.|..+.|+. .++.|+|+++||++++...|.. .....+ .+.||.|+++|. +|+|.+....
T Consensus 21 ~~~~~~~~~~v~~P~~~~~~~~P~vvllHG~~~~~~~~~~~~~~~~la~~~g~~Vv~Pd~~~~g~~~~~~~~~w~~g~~~ 100 (275)
T TIGR02821 21 ETCGVPMTFGVFLPPQAAAGPVPVLWYLSGLTCTHENFMIKAGAQRFAAEHGLALVAPDTSPRGTGIAGEDDAWDFGKGA 100 (275)
T ss_pred cccCCceEEEEEcCCCccCCCCCEEEEccCCCCCccHHHhhhHHHHHHhhcCcEEEEeCCCCCcCCCCCCcccccccCCc
Confidence 4457788899999864 2457999999999988886622 122344 456899999998 5555332100
Q ss_pred -----------CCcCCh-hhHHHHHHHHHHHHHhhhhcCCceEEEEEeccchHHHHHHHhcCCCcccEEEEcCCcccc
Q 026555 84 -----------GYIDNF-DDLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKI 149 (237)
Q Consensus 84 -----------~~~~~~-~~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~~~~vl~~~~~~~ 149 (237)
...+.+ ..+++++..+++.. ...+.+++.++||||||.+++.++.++|+.+++++++++....
T Consensus 101 ~~~~d~~~~~~~~~~~~~~~~~~~l~~~~~~~---~~~~~~~~~~~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~~~ 175 (275)
T TIGR02821 101 GFYVDATEEPWSQHYRMYSYIVQELPALVAAQ---FPLDGERQGITGHSMGGHGALVIALKNPDRFKSVSAFAPIVAP 175 (275)
T ss_pred cccccCCcCcccccchHHHHHHHHHHHHHHhh---CCCCCCceEEEEEChhHHHHHHHHHhCcccceEEEEECCccCc
Confidence 000111 12234555554431 1235678999999999999999999999999999999888654
No 70
>PRK11071 esterase YqiA; Provisional
Probab=99.60 E-value=8.6e-15 Score=107.95 Aligned_cols=90 Identities=17% Similarity=0.073 Sum_probs=71.3
Q ss_pred EEEEEEcCCCCCCcCchH-HHHHHHHhc--CCEEEEeecCCCCCCCCCCCCcCChhhHHHHHHHHHHHHHhhhhcCCceE
Q 026555 38 ALIFICHGYAMECSIGMN-STAIRLANE--GYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEKEENKEKMR 114 (237)
Q Consensus 38 ~~iv~~hG~~~~~~~~~~-~~~~~l~~~--g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 114 (237)
|+||++||++++...|.. .+...+.+. +|+|+++|+|||+ ++.++++.++++.. +.+++
T Consensus 2 p~illlHGf~ss~~~~~~~~~~~~l~~~~~~~~v~~~dl~g~~------------~~~~~~l~~l~~~~------~~~~~ 63 (190)
T PRK11071 2 STLLYLHGFNSSPRSAKATLLKNWLAQHHPDIEMIVPQLPPYP------------ADAAELLESLVLEH------GGDPL 63 (190)
T ss_pred CeEEEECCCCCCcchHHHHHHHHHHHHhCCCCeEEeCCCCCCH------------HHHHHHHHHHHHHc------CCCCe
Confidence 579999999999997722 345666553 6999999999985 24566777777665 67899
Q ss_pred EEEEeccchHHHHHHHhcCCCcccEEEEcCCccc
Q 026555 115 YLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCK 148 (237)
Q Consensus 115 ~l~G~S~Gg~~a~~~a~~~p~~~~~~vl~~~~~~ 148 (237)
+++||||||++++.+|.++|. ++|+++|...
T Consensus 64 ~lvG~S~Gg~~a~~~a~~~~~---~~vl~~~~~~ 94 (190)
T PRK11071 64 GLVGSSLGGYYATWLSQCFML---PAVVVNPAVR 94 (190)
T ss_pred EEEEECHHHHHHHHHHHHcCC---CEEEECCCCC
Confidence 999999999999999999983 4688888655
No 71
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.59 E-value=1.5e-14 Score=102.11 Aligned_cols=94 Identities=30% Similarity=0.447 Sum_probs=76.6
Q ss_pred EEEEEcCCCCCCcCchHHHHHHHHhcCCEEEEeecCCCCCCCCCCCCcCChhhHHHHHHHHHHHHHhhhhcCCceEEEEE
Q 026555 39 LIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEKEENKEKMRYLLG 118 (237)
Q Consensus 39 ~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~G 118 (237)
+||++||++.+...| ..+++.|+++||.|+.+|+|++|.+... .++.++++.+... ..+..+++++|
T Consensus 1 ~vv~~HG~~~~~~~~-~~~~~~l~~~G~~v~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~-~~~~~~i~l~G 67 (145)
T PF12695_consen 1 VVVLLHGWGGSRRDY-QPLAEALAEQGYAVVAFDYPGHGDSDGA-----------DAVERVLADIRAG-YPDPDRIILIG 67 (145)
T ss_dssp EEEEECTTTTTTHHH-HHHHHHHHHTTEEEEEESCTTSTTSHHS-----------HHHHHHHHHHHHH-HCTCCEEEEEE
T ss_pred CEEEECCCCCCHHHH-HHHHHHHHHCCCEEEEEecCCCCccchh-----------HHHHHHHHHHHhh-cCCCCcEEEEE
Confidence 589999999998876 8999999999999999999999987321 1444555543211 12778999999
Q ss_pred eccchHHHHHHHhcCCCcccEEEEcCCc
Q 026555 119 ESMGGAMVLLLHRKKPDYFDGAVLVAPM 146 (237)
Q Consensus 119 ~S~Gg~~a~~~a~~~p~~~~~~vl~~~~ 146 (237)
||+||.+++.++.+. .+++++|++++.
T Consensus 68 ~S~Gg~~a~~~~~~~-~~v~~~v~~~~~ 94 (145)
T PF12695_consen 68 HSMGGAIAANLAARN-PRVKAVVLLSPY 94 (145)
T ss_dssp ETHHHHHHHHHHHHS-TTESEEEEESES
T ss_pred EccCcHHHHHHhhhc-cceeEEEEecCc
Confidence 999999999999988 679999999983
No 72
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.59 E-value=5.1e-14 Score=117.80 Aligned_cols=124 Identities=16% Similarity=0.262 Sum_probs=92.7
Q ss_pred cEEEEEEeecCCC-CCcEEEEEEcCCCCCCcCc-h---HHHHHHHHhcCCEEEEeecCCCCCCCCCCCCcCChhhHHH-H
Q 026555 22 VKLFTCSWIPQNQ-EPKALIFICHGYAMECSIG-M---NSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDDLVD-D 95 (237)
Q Consensus 22 ~~l~~~~~~~~~~-~~~~~iv~~hG~~~~~~~~-~---~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~-d 95 (237)
..+....|.|..+ ..+++||++|++......+ . +++++.|.+.||+|+++|++|+|.+... .++++++. +
T Consensus 172 ~~~eLi~Y~P~t~~~~~~PlLiVp~~i~k~yilDL~p~~Slv~~L~~qGf~V~~iDwrgpg~s~~~----~~~ddY~~~~ 247 (532)
T TIGR01838 172 ELFQLIQYEPTTETVHKTPLLIVPPWINKYYILDLRPQNSLVRWLVEQGHTVFVISWRNPDASQAD----KTFDDYIRDG 247 (532)
T ss_pred CcEEEEEeCCCCCcCCCCcEEEECcccccceeeecccchHHHHHHHHCCcEEEEEECCCCCccccc----CChhhhHHHH
Confidence 3456667777643 2568899999997666554 1 3799999999999999999999987643 23445554 4
Q ss_pred HHHHHHHHHhhhhcCCceEEEEEeccchHHHH----HHHhcC-CCcccEEEEcCCcccccc
Q 026555 96 CFNHFTSICEKEENKEKMRYLLGESMGGAMVL----LLHRKK-PDYFDGAVLVAPMCKIAE 151 (237)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~----~~a~~~-p~~~~~~vl~~~~~~~~~ 151 (237)
+.++++.+ ....+.++++++||||||.++. .+++.+ ++++++++++++..++..
T Consensus 248 i~~al~~v--~~~~g~~kv~lvG~cmGGtl~a~ala~~aa~~~~~rv~slvll~t~~Df~~ 306 (532)
T TIGR01838 248 VIAALEVV--EAITGEKQVNCVGYCIGGTLLSTALAYLAARGDDKRIKSATFFTTLLDFSD 306 (532)
T ss_pred HHHHHHHH--HHhcCCCCeEEEEECcCcHHHHHHHHHHHHhCCCCccceEEEEecCcCCCC
Confidence 67777776 3344788999999999998852 345555 788999999999888764
No 73
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=99.58 E-value=1.4e-13 Score=103.83 Aligned_cols=126 Identities=18% Similarity=0.193 Sum_probs=101.7
Q ss_pred EeecCCcEEEE----EEeecCCCCCcEEEEEEcCCCCCCcCchHHHHHHHHhcCCEEEEeecCCCCCCCCCCCCcCChhh
Q 026555 16 ILNSRRVKLFT----CSWIPQNQEPKALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDD 91 (237)
Q Consensus 16 ~~~~~g~~l~~----~~~~~~~~~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~ 91 (237)
+...+|..+.. ....|.. .+.++||-+||.+++...+ +.+.+.|.+.|.|++.+++||+|.+++.....++-.+
T Consensus 11 ~~~~~~~~~~~~a~y~D~~~~g-s~~gTVv~~hGsPGSH~DF-kYi~~~l~~~~iR~I~iN~PGf~~t~~~~~~~~~n~e 88 (297)
T PF06342_consen 11 FQAENGKIVTVQAVYEDSLPSG-SPLGTVVAFHGSPGSHNDF-KYIRPPLDEAGIRFIGINYPGFGFTPGYPDQQYTNEE 88 (297)
T ss_pred cccccCceEEEEEEEEecCCCC-CCceeEEEecCCCCCccch-hhhhhHHHHcCeEEEEeCCCCCCCCCCCcccccChHH
Confidence 44455554443 3333443 5678999999999999988 9999999999999999999999999987766677777
Q ss_pred HHHHHHHHHHHHHhhhhcCC-ceEEEEEeccchHHHHHHHhcCCCcccEEEEcCCcccccc
Q 026555 92 LVDDCFNHFTSICEKEENKE-KMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKIAE 151 (237)
Q Consensus 92 ~~~d~~~~~~~~~~~~~~~~-~~~~l~G~S~Gg~~a~~~a~~~p~~~~~~vl~~~~~~~~~ 151 (237)
...-+.++++.+ +. ++++.+|||.|+-.|+.++..+| ..++++++|...-..
T Consensus 89 r~~~~~~ll~~l------~i~~~~i~~gHSrGcenal~la~~~~--~~g~~lin~~G~r~H 141 (297)
T PF06342_consen 89 RQNFVNALLDEL------GIKGKLIFLGHSRGCENALQLAVTHP--LHGLVLINPPGLRPH 141 (297)
T ss_pred HHHHHHHHHHHc------CCCCceEEEEeccchHHHHHHHhcCc--cceEEEecCCccccc
Confidence 777888888877 43 68999999999999999999986 679999988765443
No 74
>PRK07868 acyl-CoA synthetase; Validated
Probab=99.58 E-value=1.8e-14 Score=130.52 Aligned_cols=121 Identities=16% Similarity=0.200 Sum_probs=88.6
Q ss_pred EEEEEEeecCCC-----CCcEEEEEEcCCCCCCcCchHH-----HHHHHHhcCCEEEEeecCCCCCCCCCCC-CcCChhh
Q 026555 23 KLFTCSWIPQNQ-----EPKALIFICHGYAMECSIGMNS-----TAIRLANEGYACYGIDYQGHGKSAGLSG-YIDNFDD 91 (237)
Q Consensus 23 ~l~~~~~~~~~~-----~~~~~iv~~hG~~~~~~~~~~~-----~~~~l~~~g~~v~~~d~~g~G~s~~~~~-~~~~~~~ 91 (237)
.+..+.|.|..+ ..+++|||+||++.+...| +. +.+.|.+.||+|+++|+ |.++.... ...++.+
T Consensus 48 ~~~l~~y~~~~~~~~~~~~~~plllvhg~~~~~~~~-d~~~~~s~v~~L~~~g~~v~~~d~---G~~~~~~~~~~~~l~~ 123 (994)
T PRK07868 48 MYRLRRYFPPDNRPGQPPVGPPVLMVHPMMMSADMW-DVTRDDGAVGILHRAGLDPWVIDF---GSPDKVEGGMERNLAD 123 (994)
T ss_pred cEEEEEeCCCCccccccCCCCcEEEECCCCCCccce-ecCCcccHHHHHHHCCCEEEEEcC---CCCChhHcCccCCHHH
Confidence 456666666542 2458999999999998888 54 47899999999999994 55553322 1246666
Q ss_pred HHHHHHHHHHHHHhhhhcCCceEEEEEeccchHHHHHHHhcC-CCcccEEEEcCCccccc
Q 026555 92 LVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKK-PDYFDGAVLVAPMCKIA 150 (237)
Q Consensus 92 ~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~-p~~~~~~vl~~~~~~~~ 150 (237)
++..+.++++.+ +.. ..++++++||||||.+++.+++.+ +++|+++|+++++.++.
T Consensus 124 ~i~~l~~~l~~v--~~~-~~~~v~lvG~s~GG~~a~~~aa~~~~~~v~~lvl~~~~~d~~ 180 (994)
T PRK07868 124 HVVALSEAIDTV--KDV-TGRDVHLVGYSQGGMFCYQAAAYRRSKDIASIVTFGSPVDTL 180 (994)
T ss_pred HHHHHHHHHHHH--HHh-hCCceEEEEEChhHHHHHHHHHhcCCCccceEEEEecccccC
Confidence 666666666654 211 346899999999999999998755 56899999998887654
No 75
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=99.57 E-value=8e-14 Score=105.06 Aligned_cols=215 Identities=13% Similarity=0.070 Sum_probs=137.4
Q ss_pred cceeEeecCCcEEEEEEeecCCCCCcEEEEEEcCCCCCCcCchH-----HHHHHHHhcCCEEEEeecCCC--CCCCCCCC
Q 026555 12 DEEFILNSRRVKLFTCSWIPQNQEPKALIFICHGYAMECSIGMN-----STAIRLANEGYACYGIDYQGH--GKSAGLSG 84 (237)
Q Consensus 12 ~~~~~~~~~g~~l~~~~~~~~~~~~~~~iv~~hG~~~~~~~~~~-----~~~~~l~~~g~~v~~~d~~g~--G~s~~~~~ 84 (237)
++..+.+.-| .+++..++..+ +++|+|+=.|..+.+....|. +-+..+.++ |.++.+|.||| |...-..+
T Consensus 23 ~e~~V~T~~G-~v~V~V~Gd~~-~~kpaiiTyhDlglN~~scFq~ff~~p~m~ei~~~-fcv~HV~~PGqe~gAp~~p~~ 99 (326)
T KOG2931|consen 23 QEHDVETAHG-VVHVTVYGDPK-GNKPAIITYHDLGLNHKSCFQGFFNFPDMAEILEH-FCVYHVDAPGQEDGAPSFPEG 99 (326)
T ss_pred eeeeeccccc-cEEEEEecCCC-CCCceEEEecccccchHhHhHHhhcCHhHHHHHhh-eEEEecCCCccccCCccCCCC
Confidence 4455555554 57777777665 468889999999988775222 334566676 99999999998 43333333
Q ss_pred -CcCChhhHHHHHHHHHHHHHhhhhcCCceEEEEEeccchHHHHHHHhcCCCcccEEEEcCCccccccccCChHHHHHHH
Q 026555 85 -YIDNFDDLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKIAENVKPHPLVISVL 163 (237)
Q Consensus 85 -~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~~~~vl~~~~~~~~~~~~~~~~~~~~~ 163 (237)
...+++++++++..+++++ +.+.++-+|-..|++|...+|..||++|.|+||+++.......+ .|...+..
T Consensus 100 y~yPsmd~LAd~l~~VL~~f------~lk~vIg~GvGAGAyIL~rFAl~hp~rV~GLvLIn~~~~a~gwi--ew~~~K~~ 171 (326)
T KOG2931|consen 100 YPYPSMDDLADMLPEVLDHF------GLKSVIGMGVGAGAYILARFALNHPERVLGLVLINCDPCAKGWI--EWAYNKVS 171 (326)
T ss_pred CCCCCHHHHHHHHHHHHHhc------CcceEEEecccccHHHHHHHHhcChhheeEEEEEecCCCCchHH--HHHHHHHH
Confidence 3468999999999999999 89999999999999999999999999999999999887665422 33333333
Q ss_pred HHhh---hhCcCCc-ccCCCCcc-hhhccCHHHHHhhhhCCCcccCCCchhHHHHHHHHHHHHHhhcc----ceeeeeee
Q 026555 164 TKLC---KFIPTWK-IIPSQDIV-DVAFKLPEKRKEIRANPYCYKGRPRLKTGYELMRVSMDLENRLD----EVCSKIFN 234 (237)
Q Consensus 164 ~~~~---~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~----~i~~P~li 234 (237)
..+- .+..... +.....+. +....+.+.+..|++..........+..+...+..+.++..... .++||||+
T Consensus 172 s~~l~~~Gmt~~~~d~ll~H~Fg~e~~~~~~diVq~Yr~~l~~~~N~~Nl~~fl~ayn~R~DL~~~r~~~~~tlkc~vll 251 (326)
T KOG2931|consen 172 SNLLYYYGMTQGVKDYLLAHHFGKEELGNNSDIVQEYRQHLGERLNPKNLALFLNAYNGRRDLSIERPKLGTTLKCPVLL 251 (326)
T ss_pred HHHHHhhchhhhHHHHHHHHHhccccccccHHHHHHHHHHHHhcCChhHHHHHHHHhcCCCCccccCCCcCccccccEEE
Confidence 2110 0000000 00000111 11222455556665543333334445555555555555543333 55699999
Q ss_pred ecC
Q 026555 235 TKA 237 (237)
Q Consensus 235 i~g 237 (237)
+.|
T Consensus 252 vvG 254 (326)
T KOG2931|consen 252 VVG 254 (326)
T ss_pred Eec
Confidence 976
No 76
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=99.55 E-value=3.1e-14 Score=122.70 Aligned_cols=135 Identities=22% Similarity=0.231 Sum_probs=97.1
Q ss_pred ccceeEeecCCcEEEEEEeecCCCCC---cEEEEEEcCCCCCCcC-chHHHHHHHHhcCCEEEEeecCCCCC---C--CC
Q 026555 11 YDEEFILNSRRVKLFTCSWIPQNQEP---KALIFICHGYAMECSI-GMNSTAIRLANEGYACYGIDYQGHGK---S--AG 81 (237)
Q Consensus 11 ~~~~~~~~~~g~~l~~~~~~~~~~~~---~~~iv~~hG~~~~~~~-~~~~~~~~l~~~g~~v~~~d~~g~G~---s--~~ 81 (237)
.+...+...||.++.++.+.|.+.++ -|+||++||.+..... .+......|+..||.|+.+++||-+- . ..
T Consensus 365 ~e~~~~~~~dG~~i~~~l~~P~~~~~~k~yP~i~~~hGGP~~~~~~~~~~~~q~~~~~G~~V~~~n~RGS~GyG~~F~~~ 444 (620)
T COG1506 365 PEPVTYKSNDGETIHGWLYKPPGFDPRKKYPLIVYIHGGPSAQVGYSFNPEIQVLASAGYAVLAPNYRGSTGYGREFADA 444 (620)
T ss_pred ceEEEEEcCCCCEEEEEEecCCCCCCCCCCCEEEEeCCCCccccccccchhhHHHhcCCeEEEEeCCCCCCccHHHHHHh
Confidence 34456677799999999999976432 3899999998744443 23677789999999999999997532 1 11
Q ss_pred CCCCcCChhhHHHHHHHHHHHHHhhhhcCCceEEEEEeccchHHHHHHHhcCCCcccEEEEcCCccc
Q 026555 82 LSGYIDNFDDLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCK 148 (237)
Q Consensus 82 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~~~~vl~~~~~~ 148 (237)
.... --....+|+.++++.+.+....+.+++.+.|+|.||++++..+...| .+++.+...+...
T Consensus 445 ~~~~--~g~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~SyGGymtl~~~~~~~-~f~a~~~~~~~~~ 508 (620)
T COG1506 445 IRGD--WGGVDLEDLIAAVDALVKLPLVDPERIGITGGSYGGYMTLLAATKTP-RFKAAVAVAGGVD 508 (620)
T ss_pred hhhc--cCCccHHHHHHHHHHHHhCCCcChHHeEEeccChHHHHHHHHHhcCc-hhheEEeccCcch
Confidence 1111 11233677888888664455556779999999999999999999998 6777766655443
No 77
>PLN02442 S-formylglutathione hydrolase
Probab=99.55 E-value=2e-13 Score=107.07 Aligned_cols=130 Identities=15% Similarity=0.194 Sum_probs=91.0
Q ss_pred ecCCcEEEEEEeecCCC--CCcEEEEEEcCCCCCCcCch--HHHHHHHHhcCCEEEEeecCCCCC-----CCC------C
Q 026555 18 NSRRVKLFTCSWIPQNQ--EPKALIFICHGYAMECSIGM--NSTAIRLANEGYACYGIDYQGHGK-----SAG------L 82 (237)
Q Consensus 18 ~~~g~~l~~~~~~~~~~--~~~~~iv~~hG~~~~~~~~~--~~~~~~l~~~g~~v~~~d~~g~G~-----s~~------~ 82 (237)
..-|..+.|..|.|+.. ++.|+|+++||++++...|. ..+...+...|+.|+.+|..++|. +.. .
T Consensus 26 ~~l~~~~~~~vy~P~~~~~~~~Pvv~~lHG~~~~~~~~~~~~~~~~~~~~~g~~Vv~pd~~~~g~~~~~~~~~~~~~~~~ 105 (283)
T PLN02442 26 STLGCSMTFSVYFPPASDSGKVPVLYWLSGLTCTDENFIQKSGAQRAAAARGIALVAPDTSPRGLNVEGEADSWDFGVGA 105 (283)
T ss_pred cccCCceEEEEEcCCcccCCCCCEEEEecCCCcChHHHHHhhhHHHHHhhcCeEEEecCCCCCCCCCCCCccccccCCCc
Confidence 34577899999988732 45799999999988876552 224466677799999999887661 110 0
Q ss_pred C----CCc-----CC-hhhHHHHHHHHHHHHHhhhhcCCceEEEEEeccchHHHHHHHhcCCCcccEEEEcCCcccc
Q 026555 83 S----GYI-----DN-FDDLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKI 149 (237)
Q Consensus 83 ~----~~~-----~~-~~~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~~~~vl~~~~~~~ 149 (237)
. ... .. .+...+++..+++.. ....+.++++++||||||..++.++.++|+.+++++++++....
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~--~~~~~~~~~~i~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~~~ 180 (283)
T PLN02442 106 GFYLNATQEKWKNWRMYDYVVKELPKLLSDN--FDQLDTSRASIFGHSMGGHGALTIYLKNPDKYKSVSAFAPIANP 180 (283)
T ss_pred ceeeccccCCCcccchhhhHHHHHHHHHHHH--HHhcCCCceEEEEEChhHHHHHHHHHhCchhEEEEEEECCccCc
Confidence 0 000 01 122344555555544 22336788999999999999999999999999999999988654
No 78
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=99.54 E-value=3.8e-14 Score=107.98 Aligned_cols=212 Identities=13% Similarity=0.069 Sum_probs=114.3
Q ss_pred eEeecCCcEEEEEEeecCCCCCcEEEEEEcCCCCCCcCchHHH-----HHHHHhcCCEEEEeecCCCCCC--CCCCC-Cc
Q 026555 15 FILNSRRVKLFTCSWIPQNQEPKALIFICHGYAMECSIGMNST-----AIRLANEGYACYGIDYQGHGKS--AGLSG-YI 86 (237)
Q Consensus 15 ~~~~~~g~~l~~~~~~~~~~~~~~~iv~~hG~~~~~~~~~~~~-----~~~l~~~g~~v~~~d~~g~G~s--~~~~~-~~ 86 (237)
.+.+.-| .+++..++... +.+|+||=.|..|.+...-|..+ +..+.++ |.++.+|.||+..- .-+.. ..
T Consensus 3 ~v~t~~G-~v~V~v~G~~~-~~kp~ilT~HDvGlNh~scF~~ff~~~~m~~i~~~-f~i~Hi~aPGqe~ga~~~p~~y~y 79 (283)
T PF03096_consen 3 DVETPYG-SVHVTVQGDPK-GNKPAILTYHDVGLNHKSCFQGFFNFEDMQEILQN-FCIYHIDAPGQEEGAATLPEGYQY 79 (283)
T ss_dssp EEEETTE-EEEEEEESS---TTS-EEEEE--TT--HHHHCHHHHCSHHHHHHHTT-SEEEEEE-TTTSTT-----TT---
T ss_pred eeccCce-EEEEEEEecCC-CCCceEEEeccccccchHHHHHHhcchhHHHHhhc-eEEEEEeCCCCCCCcccccccccc
Confidence 3444444 67777776554 46899999999998877522333 4556555 99999999999543 22222 24
Q ss_pred CChhhHHHHHHHHHHHHHhhhhcCCceEEEEEeccchHHHHHHHhcCCCcccEEEEcCCccccccccCChHHHHHHHHH-
Q 026555 87 DNFDDLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKIAENVKPHPLVISVLTK- 165 (237)
Q Consensus 87 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~- 165 (237)
.+++++++++..+++++ +.+.++-+|-..|++|...+|..+|++|.|+||+++.....+.+ .|...+....
T Consensus 80 Psmd~LAe~l~~Vl~~f------~lk~vIg~GvGAGAnIL~rfAl~~p~~V~GLiLvn~~~~~~gw~--Ew~~~K~~~~~ 151 (283)
T PF03096_consen 80 PSMDQLAEMLPEVLDHF------GLKSVIGFGVGAGANILARFALKHPERVLGLILVNPTCTAAGWM--EWFYQKLSSWL 151 (283)
T ss_dssp --HHHHHCTHHHHHHHH------T---EEEEEETHHHHHHHHHHHHSGGGEEEEEEES---S---HH--HHHHHHHH---
T ss_pred cCHHHHHHHHHHHHHhC------CccEEEEEeeccchhhhhhccccCccceeEEEEEecCCCCccHH--HHHHHHHhccc
Confidence 68999999999999999 89999999999999999999999999999999999887765422 2333333311
Q ss_pred hh--hhCcCCccc-CCCCcchh-hccCHHHHHhhhhCCCcccCCCchhHHHHHHHHHHHHHhhccceeeeeeeecC
Q 026555 166 LC--KFIPTWKII-PSQDIVDV-AFKLPEKRKEIRANPYCYKGRPRLKTGYELMRVSMDLENRLDEVCSKIFNTKA 237 (237)
Q Consensus 166 ~~--~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~g 237 (237)
+. .+.+..... ....+... ...+.+.+..+++..........+..+.+.+..+.++....+...||+|++.|
T Consensus 152 L~~~gmt~~~~d~Ll~h~Fg~~~~~~n~Dlv~~yr~~l~~~~Np~Nl~~f~~sy~~R~DL~~~~~~~~c~vLlvvG 227 (283)
T PF03096_consen 152 LYSYGMTSSVKDYLLWHYFGKEEEENNSDLVQTYRQHLDERINPKNLALFLNSYNSRTDLSIERPSLGCPVLLVVG 227 (283)
T ss_dssp ----CTTS-HHHHHHHHHS-HHHHHCT-HHHHHHHHHHHT-TTHHHHHHHHHHHHT-----SECTTCCS-EEEEEE
T ss_pred ccccccccchHHhhhhcccccccccccHHHHHHHHHHHhcCCCHHHHHHHHHHHhccccchhhcCCCCCCeEEEEe
Confidence 10 111100000 00011111 11234445555443222222334555566666677887778888999999876
No 79
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=99.54 E-value=1.1e-13 Score=110.91 Aligned_cols=133 Identities=16% Similarity=0.121 Sum_probs=92.1
Q ss_pred ccceeEeecCCcEEEEEEeecCCCCCcEEEEEEcCCCCCCcCchHHHHHHHHhcCCEEEEeecCCCCCCCCCCCCcCChh
Q 026555 11 YDEEFILNSRRVKLFTCSWIPQNQEPKALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFD 90 (237)
Q Consensus 11 ~~~~~~~~~~g~~l~~~~~~~~~~~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~ 90 (237)
.++..+.. .|.+|......|..+++.|+||++.|+.+..+.++.-+.+.|...|+.++++|.||.|.|....-. .+.+
T Consensus 165 i~~v~iP~-eg~~I~g~LhlP~~~~p~P~VIv~gGlDs~qeD~~~l~~~~l~~rGiA~LtvDmPG~G~s~~~~l~-~D~~ 242 (411)
T PF06500_consen 165 IEEVEIPF-EGKTIPGYLHLPSGEKPYPTVIVCGGLDSLQEDLYRLFRDYLAPRGIAMLTVDMPGQGESPKWPLT-QDSS 242 (411)
T ss_dssp EEEEEEEE-TTCEEEEEEEESSSSS-EEEEEEE--TTS-GGGGHHHHHCCCHHCT-EEEEE--TTSGGGTTT-S--S-CC
T ss_pred cEEEEEee-CCcEEEEEEEcCCCCCCCCEEEEeCCcchhHHHHHHHHHHHHHhCCCEEEEEccCCCcccccCCCC-cCHH
Confidence 44444444 458888888888876788999999999988876645566778899999999999999998643222 2333
Q ss_pred hHHHHHHHHHHHHHhhhhcCCceEEEEEeccchHHHHHHHhcCCCcccEEEEcCCccc
Q 026555 91 DLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCK 148 (237)
Q Consensus 91 ~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~~~~vl~~~~~~ 148 (237)
.+. .++++++.+....+..+|.++|.|+||++|+.+|...+++++++|..++...
T Consensus 243 ~l~---~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le~~RlkavV~~Ga~vh 297 (411)
T PF06500_consen 243 RLH---QAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALEDPRLKAVVALGAPVH 297 (411)
T ss_dssp HHH---HHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHTTTT-SEEEEES---S
T ss_pred HHH---HHHHHHHhcCCccChhheEEEEeccchHHHHHHHHhcccceeeEeeeCchHh
Confidence 333 3556666555666788999999999999999999988899999999998753
No 80
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=99.53 E-value=3.2e-13 Score=106.91 Aligned_cols=139 Identities=17% Similarity=0.195 Sum_probs=99.0
Q ss_pred cCccccceeEeecCCcEEEEEEeecC-CCCCcEEEEEEcCCCCCCcCchHHHHHHHHhcCCEEEEeecCCCC-CCCCC--
Q 026555 7 HNIKYDEEFILNSRRVKLFTCSWIPQ-NQEPKALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHG-KSAGL-- 82 (237)
Q Consensus 7 ~~~~~~~~~~~~~~g~~l~~~~~~~~-~~~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G-~s~~~-- 82 (237)
..+....-.+...+|..|..+.+.|. .+++.|.||.+||+++....+ ... -.++..||.|+.+|.||+| .+...
T Consensus 52 ~~~~vy~v~f~s~~g~~V~g~l~~P~~~~~~~Pavv~~hGyg~~~~~~-~~~-~~~a~~G~~vl~~d~rGqg~~~~d~~~ 129 (320)
T PF05448_consen 52 PGVEVYDVSFESFDGSRVYGWLYRPKNAKGKLPAVVQFHGYGGRSGDP-FDL-LPWAAAGYAVLAMDVRGQGGRSPDYRG 129 (320)
T ss_dssp SSEEEEEEEEEEGGGEEEEEEEEEES-SSSSEEEEEEE--TT--GGGH-HHH-HHHHHTT-EEEEE--TTTSSSS-B-SS
T ss_pred CCEEEEEEEEEccCCCEEEEEEEecCCCCCCcCEEEEecCCCCCCCCc-ccc-cccccCCeEEEEecCCCCCCCCCCccc
Confidence 34455566677889999999999998 446789999999999987655 333 2477889999999999998 33210
Q ss_pred ------C----------CCcCChhhHHHHHHHHHHHHHhhhhcCCceEEEEEeccchHHHHHHHhcCCCcccEEEEcCCc
Q 026555 83 ------S----------GYIDNFDDLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPM 146 (237)
Q Consensus 83 ------~----------~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~~~~vl~~~~ 146 (237)
. ...+-+...+.|+..+++.+.+....+.+++.+.|.|+||.+++.+|+..+ +|++++...|.
T Consensus 130 ~~~~~~~g~~~~g~~~~~e~~yyr~~~~D~~ravd~l~slpevD~~rI~v~G~SqGG~lal~~aaLd~-rv~~~~~~vP~ 208 (320)
T PF05448_consen 130 SSGGTLKGHITRGIDDNPEDYYYRRVYLDAVRAVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAALDP-RVKAAAADVPF 208 (320)
T ss_dssp BSSS-SSSSTTTTTTS-TTT-HHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSS-T-SEEEEESES
T ss_pred cCCCCCccHHhcCccCchHHHHHHHHHHHHHHHHHHHHhCCCcCcceEEEEeecCchHHHHHHHHhCc-cccEEEecCCC
Confidence 0 011123345789999999998777788899999999999999999999886 59999988765
Q ss_pred cc
Q 026555 147 CK 148 (237)
Q Consensus 147 ~~ 148 (237)
..
T Consensus 209 l~ 210 (320)
T PF05448_consen 209 LC 210 (320)
T ss_dssp SS
T ss_pred cc
Confidence 43
No 81
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=99.52 E-value=2.2e-13 Score=117.66 Aligned_cols=116 Identities=17% Similarity=0.077 Sum_probs=85.1
Q ss_pred EeecCCcEEEEEEeecC------CCCCcEEEEEEcCCCCCCcCchHHHHHHHHhcCCEEEEeecCCCCCCCCC-------
Q 026555 16 ILNSRRVKLFTCSWIPQ------NQEPKALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGL------- 82 (237)
Q Consensus 16 ~~~~~g~~l~~~~~~~~------~~~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~------- 82 (237)
+...++.++.|...... .....|+||++||++++.+.| ..+++.|.++||+|+++|+||||.|...
T Consensus 422 ~~~p~~~~i~~~~~~~g~~~~~~p~~g~P~VVllHG~~g~~~~~-~~lA~~La~~Gy~VIaiDlpGHG~S~~~~~~~~~~ 500 (792)
T TIGR03502 422 LTTPNGPVIAAFRAGTGLETFAAPTDGWPVVIYQHGITGAKENA-LAFAGTLAAAGVATIAIDHPLHGARSFDANASGVN 500 (792)
T ss_pred EEecCcchhhhhhcccccccccCCCCCCcEEEEeCCCCCCHHHH-HHHHHHHHhCCcEEEEeCCCCCCcccccccccccc
Confidence 34445555555543211 012357999999999999988 8999999988999999999999998422
Q ss_pred ---CCC------------cCChhhHHHHHHHHHHHHHhh----h------hcCCceEEEEEeccchHHHHHHHhc
Q 026555 83 ---SGY------------IDNFDDLVDDCFNHFTSICEK----E------ENKEKMRYLLGESMGGAMVLLLHRK 132 (237)
Q Consensus 83 ---~~~------------~~~~~~~~~d~~~~~~~~~~~----~------~~~~~~~~l~G~S~Gg~~a~~~a~~ 132 (237)
... ..++.+.+.|+..+...+... . ..+..+++++||||||.++..++..
T Consensus 501 a~~~~~~~y~Nl~~l~~aRDn~rQ~v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~ 575 (792)
T TIGR03502 501 ATNANVLAYMNLASLLVARDNLRQSILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAY 575 (792)
T ss_pred ccccCccceeccccccccccCHHHHHHHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHh
Confidence 000 126788899999988887300 1 1346799999999999999999875
No 82
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=99.50 E-value=6.7e-14 Score=106.12 Aligned_cols=75 Identities=27% Similarity=0.285 Sum_probs=66.7
Q ss_pred CEEEEeecCCCCCCCC---CCCCcCChhhHHHHHHHHHHHHHhhhhcCCceEEEEEeccchHHHHHHHhcCCCcccEEEE
Q 026555 66 YACYGIDYQGHGKSAG---LSGYIDNFDDLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVL 142 (237)
Q Consensus 66 ~~v~~~d~~g~G~s~~---~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~~~~vl 142 (237)
|+|+++|+||+|.|+. .....++.+++++++..+++.+ +.++++++||||||.+++.++.++|++|+++|+
T Consensus 1 f~vi~~d~rG~g~S~~~~~~~~~~~~~~~~~~~~~~~~~~l------~~~~~~~vG~S~Gg~~~~~~a~~~p~~v~~lvl 74 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHWDPDFPDYTTDDLAADLEALREAL------GIKKINLVGHSMGGMLALEYAAQYPERVKKLVL 74 (230)
T ss_dssp EEEEEEECTTSTTSSSCCGSGSCTHCHHHHHHHHHHHHHHH------TTSSEEEEEETHHHHHHHHHHHHSGGGEEEEEE
T ss_pred CEEEEEeCCCCCCCCCCccCCcccccHHHHHHHHHHHHHHh------CCCCeEEEEECCChHHHHHHHHHCchhhcCcEE
Confidence 6899999999999995 3344467888888888888888 888899999999999999999999999999999
Q ss_pred cCCc
Q 026555 143 VAPM 146 (237)
Q Consensus 143 ~~~~ 146 (237)
++++
T Consensus 75 ~~~~ 78 (230)
T PF00561_consen 75 ISPP 78 (230)
T ss_dssp ESES
T ss_pred Eeee
Confidence 9986
No 83
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.47 E-value=9.7e-13 Score=100.90 Aligned_cols=115 Identities=25% Similarity=0.316 Sum_probs=87.0
Q ss_pred CCcEEEEEEeecCCCCCcEEEEEEcCCCCCCcCchHHHHHHHHhc--CCEEEEeecCCCCCCCCCCCCcCChhhHHHHHH
Q 026555 20 RRVKLFTCSWIPQNQEPKALIFICHGYAMECSIGMNSTAIRLANE--GYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCF 97 (237)
Q Consensus 20 ~g~~l~~~~~~~~~~~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~--g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~d~~ 97 (237)
.+..+.|...... .|+|+++||++.+...| ......+... .|+++.+|+||||.|. .. .......++++.
T Consensus 8 ~~~~~~~~~~~~~----~~~i~~~hg~~~~~~~~-~~~~~~~~~~~~~~~~~~~d~~g~g~s~-~~--~~~~~~~~~~~~ 79 (282)
T COG0596 8 DGVRLAYREAGGG----GPPLVLLHGFPGSSSVW-RPVFKVLPALAARYRVIAPDLRGHGRSD-PA--GYSLSAYADDLA 79 (282)
T ss_pred CCeEEEEeecCCC----CCeEEEeCCCCCchhhh-HHHHHHhhccccceEEEEecccCCCCCC-cc--cccHHHHHHHHH
Confidence 3445555555332 44899999999998877 4432333332 1899999999999997 11 134444578888
Q ss_pred HHHHHHHhhhhcCCceEEEEEeccchHHHHHHHhcCCCcccEEEEcCCccc
Q 026555 98 NHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCK 148 (237)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~~~~vl~~~~~~ 148 (237)
.+++.+ +..+++++|||+||.+++.++.++|+.++++|++++...
T Consensus 80 ~~~~~~------~~~~~~l~G~S~Gg~~~~~~~~~~p~~~~~~v~~~~~~~ 124 (282)
T COG0596 80 ALLDAL------GLEKVVLVGHSMGGAVALALALRHPDRVRGLVLIGPAPP 124 (282)
T ss_pred HHHHHh------CCCceEEEEecccHHHHHHHHHhcchhhheeeEecCCCC
Confidence 888877 667799999999999999999999999999999997754
No 84
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=99.47 E-value=3.8e-12 Score=91.97 Aligned_cols=111 Identities=24% Similarity=0.454 Sum_probs=86.9
Q ss_pred CCcEEEEEEcCCCCCCcC-chHHHHHHHHhcCCEEEEeecCCCCCCCCCCCCcCChhhHHHHHHHHHHHHHhhhhcCCce
Q 026555 35 EPKALIFICHGYAMECSI-GMNSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEKEENKEKM 113 (237)
Q Consensus 35 ~~~~~iv~~hG~~~~~~~-~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 113 (237)
+...++|++||+.++... ++..++.+|.+.|+.++.+|++|.|.|++...+ ......++|+..+++++.. ....=
T Consensus 31 gs~e~vvlcHGfrS~Kn~~~~~~vA~~~e~~gis~fRfDF~GnGeS~gsf~~-Gn~~~eadDL~sV~q~~s~---~nr~v 106 (269)
T KOG4667|consen 31 GSTEIVVLCHGFRSHKNAIIMKNVAKALEKEGISAFRFDFSGNGESEGSFYY-GNYNTEADDLHSVIQYFSN---SNRVV 106 (269)
T ss_pred CCceEEEEeeccccccchHHHHHHHHHHHhcCceEEEEEecCCCCcCCcccc-CcccchHHHHHHHHHHhcc---CceEE
Confidence 346789999999988774 345789999999999999999999999976544 3556667999999999821 01122
Q ss_pred EEEEEeccchHHHHHHHhcCCCcccEEEEcCCccccc
Q 026555 114 RYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKIA 150 (237)
Q Consensus 114 ~~l~G~S~Gg~~a~~~a~~~p~~~~~~vl~~~~~~~~ 150 (237)
-+++|||-||.+++.++.++++ +..+|-+++..+..
T Consensus 107 ~vi~gHSkGg~Vvl~ya~K~~d-~~~viNcsGRydl~ 142 (269)
T KOG4667|consen 107 PVILGHSKGGDVVLLYASKYHD-IRNVINCSGRYDLK 142 (269)
T ss_pred EEEEeecCccHHHHHHHHhhcC-chheEEcccccchh
Confidence 4689999999999999999987 77777776665543
No 85
>PRK11460 putative hydrolase; Provisional
Probab=99.47 E-value=6.9e-13 Score=101.02 Aligned_cols=111 Identities=13% Similarity=0.098 Sum_probs=75.1
Q ss_pred CCcEEEEEEcCCCCCCcCchHHHHHHHHhcCCEEEEeecCCCCCCC---CCC-------CCcC---ChhhHHHHHHHHHH
Q 026555 35 EPKALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSA---GLS-------GYID---NFDDLVDDCFNHFT 101 (237)
Q Consensus 35 ~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~---~~~-------~~~~---~~~~~~~d~~~~~~ 101 (237)
++.++||++||++++...+ .++++.|.+.++.+..++++|...+. +.. .... +..+....+.++++
T Consensus 14 ~~~~~vIlLHG~G~~~~~~-~~l~~~l~~~~~~~~~i~~~g~~~~~~~~g~~W~~~~~~~~~~~~~~~~~~~~~l~~~i~ 92 (232)
T PRK11460 14 PAQQLLLLFHGVGDNPVAM-GEIGSWFAPAFPDALVVSVGGPEPSGNGAGRQWFSVQGITEDNRQARVAAIMPTFIETVR 92 (232)
T ss_pred CCCcEEEEEeCCCCChHHH-HHHHHHHHHHCCCCEEECCCCCCCcCCCCCcccccCCCCCccchHHHHHHHHHHHHHHHH
Confidence 5678999999999999977 89999998776555555566643221 100 0000 11222334444555
Q ss_pred HHHhhhhcCCceEEEEEeccchHHHHHHHhcCCCcccEEEEcCCc
Q 026555 102 SICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPM 146 (237)
Q Consensus 102 ~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~~~~vl~~~~ 146 (237)
.+.++...+.++++++|||+||.+++.++.++|+.+.+++.+++.
T Consensus 93 ~~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~~~~~vv~~sg~ 137 (232)
T PRK11460 93 YWQQQSGVGASATALIGFSQGAIMALEAVKAEPGLAGRVIAFSGR 137 (232)
T ss_pred HHHHhcCCChhhEEEEEECHHHHHHHHHHHhCCCcceEEEEeccc
Confidence 553333335578999999999999999999999888888877654
No 86
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=99.44 E-value=2.8e-13 Score=105.93 Aligned_cols=125 Identities=18% Similarity=0.237 Sum_probs=91.6
Q ss_pred CCcEEEEEEeecCCCCCcEEEEEEcCCCCCCcC----------chHHHH---HHHHhcCCEEEEeecCCCC-CCCCC---
Q 026555 20 RRVKLFTCSWIPQNQEPKALIFICHGYAMECSI----------GMNSTA---IRLANEGYACYGIDYQGHG-KSAGL--- 82 (237)
Q Consensus 20 ~g~~l~~~~~~~~~~~~~~~iv~~hG~~~~~~~----------~~~~~~---~~l~~~g~~v~~~d~~g~G-~s~~~--- 82 (237)
++..|.|..|+-.+.....+|+++|++.++++. |+..+. +.+.-..|-|++.|..|.+ .|.++
T Consensus 34 ~~~~vay~T~Gtln~~~~NaVli~HaLtG~~h~~~~~~~~~~GWW~~liGpG~~iDt~r~fvIc~NvlG~c~GStgP~s~ 113 (368)
T COG2021 34 SDARVAYETYGTLNAEKDNAVLICHALTGDSHAAGTADDGEKGWWDDLIGPGKPIDTERFFVICTNVLGGCKGSTGPSSI 113 (368)
T ss_pred cCcEEEEEecccccccCCceEEEeccccCcccccccCCCCCCccHHHhcCCCCCCCccceEEEEecCCCCCCCCCCCCCc
Confidence 346899999987664556789999999986653 334432 2232234889999999875 23221
Q ss_pred -CC--------CcCChhhHHHHHHHHHHHHHhhhhcCCceEE-EEEeccchHHHHHHHhcCCCcccEEEEcCCccccc
Q 026555 83 -SG--------YIDNFDDLVDDCFNHFTSICEKEENKEKMRY-LLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKIA 150 (237)
Q Consensus 83 -~~--------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~-l~G~S~Gg~~a~~~a~~~p~~~~~~vl~~~~~~~~ 150 (237)
.. ...++.|+++--..+++.+ +.+++. ++|-||||+.+++++..+|+++.++|.+++.....
T Consensus 114 ~p~g~~yg~~FP~~ti~D~V~aq~~ll~~L------GI~~l~avvGgSmGGMqaleWa~~yPd~V~~~i~ia~~~r~s 185 (368)
T COG2021 114 NPGGKPYGSDFPVITIRDMVRAQRLLLDAL------GIKKLAAVVGGSMGGMQALEWAIRYPDRVRRAIPIATAARLS 185 (368)
T ss_pred CCCCCccccCCCcccHHHHHHHHHHHHHhc------CcceEeeeeccChHHHHHHHHHHhChHHHhhhheecccccCC
Confidence 11 2245566666666677777 899987 99999999999999999999999999998876654
No 87
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.42 E-value=4e-12 Score=95.02 Aligned_cols=133 Identities=17% Similarity=0.216 Sum_probs=105.4
Q ss_pred ceeEeecCCcEEEEEEeecCCC-CCcEEEEEEcCCCCCCcCchHHHHHHHHhcCCEEEEeecCCCCCCCCC----C----
Q 026555 13 EEFILNSRRVKLFTCSWIPQNQ-EPKALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGL----S---- 83 (237)
Q Consensus 13 ~~~~~~~~g~~l~~~~~~~~~~-~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~----~---- 83 (237)
.-++...+|.+|..+...|..+ ++.|.||-.||+++....| ..+. .++..||.|+.+|.||+|.|... .
T Consensus 58 dvTf~g~~g~rI~gwlvlP~~~~~~~P~vV~fhGY~g~~g~~-~~~l-~wa~~Gyavf~MdvRGQg~~~~dt~~~p~~~s 135 (321)
T COG3458 58 DVTFTGYGGARIKGWLVLPRHEKGKLPAVVQFHGYGGRGGEW-HDML-HWAVAGYAVFVMDVRGQGSSSQDTADPPGGPS 135 (321)
T ss_pred EEEEeccCCceEEEEEEeecccCCccceEEEEeeccCCCCCc-cccc-cccccceeEEEEecccCCCccccCCCCCCCCc
Confidence 3456678899999999999876 6789999999999998866 4443 45567999999999999987421 0
Q ss_pred ------------CCcCChhhHHHHHHHHHHHHHhhhhcCCceEEEEEeccchHHHHHHHhcCCCcccEEEEcCCccc
Q 026555 84 ------------GYIDNFDDLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCK 148 (237)
Q Consensus 84 ------------~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~~~~vl~~~~~~ 148 (237)
.+.+-+.....|+..+++.+.+-.+.+.+++.+.|.|.||.+++..++..| ++++++++=|...
T Consensus 136 ~pG~mtrGilD~kd~yyyr~v~~D~~~ave~~~sl~~vde~Ri~v~G~SqGGglalaaaal~~-rik~~~~~~Pfl~ 211 (321)
T COG3458 136 DPGFMTRGILDRKDTYYYRGVFLDAVRAVEILASLDEVDEERIGVTGGSQGGGLALAAAALDP-RIKAVVADYPFLS 211 (321)
T ss_pred CCceeEeecccCCCceEEeeehHHHHHHHHHHhccCccchhheEEeccccCchhhhhhhhcCh-hhhcccccccccc
Confidence 111234556789999999998777888999999999999999999998876 5888888765543
No 88
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.40 E-value=2e-11 Score=92.84 Aligned_cols=129 Identities=18% Similarity=0.156 Sum_probs=98.3
Q ss_pred eecCCcEEEEEEeecCCCCCcEEEEEEcCCCCCCcCchHHHHHHHHhcCCEEEEeecCCC-CCCCCCC--C----C----
Q 026555 17 LNSRRVKLFTCSWIPQNQEPKALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGH-GKSAGLS--G----Y---- 85 (237)
Q Consensus 17 ~~~~g~~l~~~~~~~~~~~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~-G~s~~~~--~----~---- 85 (237)
....|.++..+...|....+.|.||++|++.+-.... +.++++|++.||.|+++|+-+. |.+.... . .
T Consensus 7 ~~~~~~~~~~~~a~P~~~~~~P~VIv~hei~Gl~~~i-~~~a~rlA~~Gy~v~~Pdl~~~~~~~~~~~~~~~~~~~~~~~ 85 (236)
T COG0412 7 IPAPDGELPAYLARPAGAGGFPGVIVLHEIFGLNPHI-RDVARRLAKAGYVVLAPDLYGRQGDPTDIEDEPAELETGLVE 85 (236)
T ss_pred eeCCCceEeEEEecCCcCCCCCEEEEEecccCCchHH-HHHHHHHHhCCcEEEechhhccCCCCCcccccHHHHhhhhhc
Confidence 3344588888888888655559999999988776644 8999999999999999998763 3333211 0 0
Q ss_pred cCChhhHHHHHHHHHHHHHhhhhcCCceEEEEEeccchHHHHHHHhcCCCcccEEEEcCCcc
Q 026555 86 IDNFDDLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMC 147 (237)
Q Consensus 86 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~~~~vl~~~~~ 147 (237)
..+..+...|+.+.++++.++.+.+.+++.++|+||||.+++.++.+.| .+++.+..-+..
T Consensus 86 ~~~~~~~~~d~~a~~~~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~~~-~v~a~v~fyg~~ 146 (236)
T COG0412 86 RVDPAEVLADIDAALDYLARQPQVDPKRIGVVGFCMGGGLALLAATRAP-EVKAAVAFYGGL 146 (236)
T ss_pred cCCHHHHHHHHHHHHHHHHhCCCCCCceEEEEEEcccHHHHHHhhcccC-CccEEEEecCCC
Confidence 0123677889999999996555556789999999999999999999988 588887764443
No 89
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=99.38 E-value=6.6e-12 Score=99.20 Aligned_cols=144 Identities=17% Similarity=0.176 Sum_probs=91.4
Q ss_pred cccCccccceeEeecCCcEEEEEEeecCC-CCCcEEEEEEcCCCCCCcC-----------------chHHHHHHHHhcCC
Q 026555 5 IDHNIKYDEEFILNSRRVKLFTCSWIPQN-QEPKALIFICHGYAMECSI-----------------GMNSTAIRLANEGY 66 (237)
Q Consensus 5 ~~~~~~~~~~~~~~~~g~~l~~~~~~~~~-~~~~~~iv~~hG~~~~~~~-----------------~~~~~~~~l~~~g~ 66 (237)
...++..++..+.+.++..+..+...|.. +++.|.||++||-+.+.+. .-..++..|+++||
T Consensus 82 qrdGY~~EKv~f~~~p~~~vpaylLvPd~~~~p~PAVL~lHgHg~~Ke~~~g~~gv~~~~~~~~~~~~~~~g~~LAk~GY 161 (390)
T PF12715_consen 82 QRDGYTREKVEFNTTPGSRVPAYLLVPDGAKGPFPAVLCLHGHGGGKEKMAGEDGVSPDLKDDYDDPKQDYGDQLAKRGY 161 (390)
T ss_dssp EETTEEEEEEEE--STTB-EEEEEEEETT--S-EEEEEEE--TT--HHHHCT---SSGCG--STTSTTT-HHHHHHTTTS
T ss_pred ecCCeEEEEEEEEccCCeeEEEEEEecCCCCCCCCEEEEeCCCCCCcccccCCcccccccchhhccccccHHHHHHhCCC
Confidence 34455556666777888999988888886 5788999999997655321 01346889999999
Q ss_pred EEEEeecCCCCCCCCCCCC----cCChhhH---------------HHHHHHHHHHHHhhhhcCCceEEEEEeccchHHHH
Q 026555 67 ACYGIDYQGHGKSAGLSGY----IDNFDDL---------------VDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVL 127 (237)
Q Consensus 67 ~v~~~d~~g~G~s~~~~~~----~~~~~~~---------------~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~ 127 (237)
.|+++|.+|+|........ .++...+ +.|...+++++.++.+.+.++|.++|+||||..++
T Consensus 162 Vvla~D~~g~GER~~~e~~~~~~~~~~~~la~~~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~GfSmGg~~a~ 241 (390)
T PF12715_consen 162 VVLAPDALGFGERGDMEGAAQGSNYDCQALARNLLMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMGFSMGGYRAW 241 (390)
T ss_dssp EEEEE--TTSGGG-SSCCCTTTTS--HHHHHHHHHHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEEEGGGHHHHH
T ss_pred EEEEEccccccccccccccccccchhHHHHHHHHHHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEeecccHHHHH
Confidence 9999999999976532211 1111111 34555688999888888999999999999999999
Q ss_pred HHHhcCCCcccEEEEcCCcccc
Q 026555 128 LLHRKKPDYFDGAVLVAPMCKI 149 (237)
Q Consensus 128 ~~a~~~p~~~~~~vl~~~~~~~ 149 (237)
.+++.. ++|++.|..+.....
T Consensus 242 ~LaALD-dRIka~v~~~~l~~~ 262 (390)
T PF12715_consen 242 WLAALD-DRIKATVANGYLCTT 262 (390)
T ss_dssp HHHHH--TT--EEEEES-B--H
T ss_pred HHHHcc-hhhHhHhhhhhhhcc
Confidence 999886 479888887655433
No 90
>PRK10162 acetyl esterase; Provisional
Probab=99.38 E-value=1.2e-11 Score=98.57 Aligned_cols=125 Identities=17% Similarity=0.179 Sum_probs=89.7
Q ss_pred eeEeecCCcEEEEEEeecCCCCCcEEEEEEcCCC---CCCcCchHHHHHHHHh-cCCEEEEeecCCCCCCCCCCCCcCCh
Q 026555 14 EFILNSRRVKLFTCSWIPQNQEPKALIFICHGYA---MECSIGMNSTAIRLAN-EGYACYGIDYQGHGKSAGLSGYIDNF 89 (237)
Q Consensus 14 ~~~~~~~g~~l~~~~~~~~~~~~~~~iv~~hG~~---~~~~~~~~~~~~~l~~-~g~~v~~~d~~g~G~s~~~~~~~~~~ 89 (237)
..+...+| .+..+.|.|.. +..|+||++||.+ ++...+ ..+.+.|++ .|+.|+++|+|..... .+
T Consensus 60 ~~i~~~~g-~i~~~~y~P~~-~~~p~vv~~HGGg~~~g~~~~~-~~~~~~la~~~g~~Vv~vdYrlape~--------~~ 128 (318)
T PRK10162 60 YMVPTPYG-QVETRLYYPQP-DSQATLFYLHGGGFILGNLDTH-DRIMRLLASYSGCTVIGIDYTLSPEA--------RF 128 (318)
T ss_pred EEEecCCC-ceEEEEECCCC-CCCCEEEEEeCCcccCCCchhh-hHHHHHHHHHcCCEEEEecCCCCCCC--------CC
Confidence 33444445 58888888864 4568999999976 444445 678888877 4999999999854321 23
Q ss_pred hhHHHHHHHHHHHHHhh---hhcCCceEEEEEeccchHHHHHHHhcC------CCcccEEEEcCCcccc
Q 026555 90 DDLVDDCFNHFTSICEK---EENKEKMRYLLGESMGGAMVLLLHRKK------PDYFDGAVLVAPMCKI 149 (237)
Q Consensus 90 ~~~~~d~~~~~~~~~~~---~~~~~~~~~l~G~S~Gg~~a~~~a~~~------p~~~~~~vl~~~~~~~ 149 (237)
...++|+.++++++.+. ...+.++++++|+|+||.+++.++... +..+++++++.|..+.
T Consensus 129 p~~~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~ 197 (318)
T PRK10162 129 PQAIEEIVAVCCYFHQHAEDYGINMSRIGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLYGL 197 (318)
T ss_pred CCcHHHHHHHHHHHHHhHHHhCCChhHEEEEEECHHHHHHHHHHHHHHhcCCCccChhheEEECCccCC
Confidence 34567777777777432 122567999999999999999888642 3579999999887765
No 91
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=99.36 E-value=6.5e-12 Score=94.94 Aligned_cols=119 Identities=19% Similarity=0.190 Sum_probs=83.6
Q ss_pred EEEEeecCCCCCcEEEEEEcCCCCCCcCchHHHHHHHHhcCCEEEEeecCCCCC-CCCCCC-CcC--------ChhhHHH
Q 026555 25 FTCSWIPQNQEPKALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGK-SAGLSG-YID--------NFDDLVD 94 (237)
Q Consensus 25 ~~~~~~~~~~~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~-s~~~~~-~~~--------~~~~~~~ 94 (237)
..+...|.+.++.|.||++|++.+-.. +.+.+++.|++.||.|+++|+-+-.. ...... ... ..+...+
T Consensus 2 ~ay~~~P~~~~~~~~Vvv~~d~~G~~~-~~~~~ad~lA~~Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (218)
T PF01738_consen 2 DAYVARPEGGGPRPAVVVIHDIFGLNP-NIRDLADRLAEEGYVVLAPDLFGGRGAPPSDPEEAFAAMRELFAPRPEQVAA 80 (218)
T ss_dssp EEEEEEETTSSSEEEEEEE-BTTBS-H-HHHHHHHHHHHTT-EEEEE-CCCCTS--CCCHHCHHHHHHHCHHHSHHHHHH
T ss_pred eEEEEeCCCCCCCCEEEEEcCCCCCch-HHHHHHHHHHhcCCCEEecccccCCCCCccchhhHHHHHHHHHhhhHHHHHH
Confidence 345666776457899999999887665 44789999999999999999864433 111100 000 1245567
Q ss_pred HHHHHHHHHHhhhhcCCceEEEEEeccchHHHHHHHhcCCCcccEEEEcCC
Q 026555 95 DCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAP 145 (237)
Q Consensus 95 d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~~~~vl~~~ 145 (237)
|+.++++++.+....+.+++.++|+|+||.+++.++.+. +.+++.|..-|
T Consensus 81 ~~~aa~~~l~~~~~~~~~kig~vGfc~GG~~a~~~a~~~-~~~~a~v~~yg 130 (218)
T PF01738_consen 81 DLQAAVDYLRAQPEVDPGKIGVVGFCWGGKLALLLAARD-PRVDAAVSFYG 130 (218)
T ss_dssp HHHHHHHHHHCTTTCEEEEEEEEEETHHHHHHHHHHCCT-TTSSEEEEES-
T ss_pred HHHHHHHHHHhccccCCCcEEEEEEecchHHhhhhhhhc-cccceEEEEcC
Confidence 888889998554444678999999999999999999887 56999988876
No 92
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.35 E-value=2.3e-12 Score=94.11 Aligned_cols=134 Identities=16% Similarity=0.210 Sum_probs=98.3
Q ss_pred eeEeecCCcEEEEEEeecCCCCCcEEEEEEcCCCCCCcCchHHHHHHHHhcCCEEEEeecCCCCCCCCCC--CCcCChhh
Q 026555 14 EFILNSRRVKLFTCSWIPQNQEPKALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLS--GYIDNFDD 91 (237)
Q Consensus 14 ~~~~~~~g~~l~~~~~~~~~~~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~--~~~~~~~~ 91 (237)
-.+...||..+....|..++ +....+++-.+.+.-...| +.++...++.||.|+++|+||.|.|.... .....+.|
T Consensus 8 ~~l~~~DG~~l~~~~~pA~~-~~~g~~~va~a~Gv~~~fY-RrfA~~a~~~Gf~Vlt~dyRG~g~S~p~~~~~~~~~~~D 85 (281)
T COG4757 8 AHLPAPDGYSLPGQRFPADG-KASGRLVVAGATGVGQYFY-RRFAAAAAKAGFEVLTFDYRGIGQSRPASLSGSQWRYLD 85 (281)
T ss_pred cccccCCCccCccccccCCC-CCCCcEEecccCCcchhHh-HHHHHHhhccCceEEEEecccccCCCccccccCccchhh
Confidence 45677899999999985443 3344577777777666655 99999999999999999999999987432 22356777
Q ss_pred HHH-HHHHHHHHHHhhhhcCCceEEEEEeccchHHHHHHHhcCCCcccEEEEcCCcccccccc
Q 026555 92 LVD-DCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKIAENV 153 (237)
Q Consensus 92 ~~~-d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~~~~vl~~~~~~~~~~~ 153 (237)
++. |+.++++.+ ++.....+.+.+|||+||.+.-.+. +++ +..+....++.......+
T Consensus 86 wA~~D~~aal~~~--~~~~~~~P~y~vgHS~GGqa~gL~~-~~~-k~~a~~vfG~gagwsg~m 144 (281)
T COG4757 86 WARLDFPAALAAL--KKALPGHPLYFVGHSFGGQALGLLG-QHP-KYAAFAVFGSGAGWSGWM 144 (281)
T ss_pred hhhcchHHHHHHH--HhhCCCCceEEeeccccceeecccc-cCc-ccceeeEeccccccccch
Confidence 765 999999998 5544677999999999997766554 344 566666666666655443
No 93
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=99.35 E-value=1.9e-11 Score=90.13 Aligned_cols=129 Identities=14% Similarity=0.093 Sum_probs=83.3
Q ss_pred eeEeecCCcEEEEEEeecCCCC--CcEEEEEEcCCCCCCcCchHHHHHHHHhcCCEEEEeecCCC-CCCCCCCCCcCChh
Q 026555 14 EFILNSRRVKLFTCSWIPQNQE--PKALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGH-GKSAGLSGYIDNFD 90 (237)
Q Consensus 14 ~~~~~~~g~~l~~~~~~~~~~~--~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~-G~s~~~~~~~~~~~ 90 (237)
..+...+|.+|+.+...|.+.. ..++||+.+||+.....+ ..++.+|+..||+|+.+|...| |.|++.... +++.
T Consensus 5 hvi~~~~~~~I~vwet~P~~~~~~~~~tiliA~Gf~rrmdh~-agLA~YL~~NGFhViRyDsl~HvGlSsG~I~e-ftms 82 (294)
T PF02273_consen 5 HVIRLEDGRQIRVWETRPKNNEPKRNNTILIAPGFARRMDHF-AGLAEYLSANGFHVIRYDSLNHVGLSSGDINE-FTMS 82 (294)
T ss_dssp EEEEETTTEEEEEEEE---TTS---S-EEEEE-TT-GGGGGG-HHHHHHHHTTT--EEEE---B--------------HH
T ss_pred ceeEcCCCCEEEEeccCCCCCCcccCCeEEEecchhHHHHHH-HHHHHHHhhCCeEEEeccccccccCCCCChhh-cchH
Confidence 3456778999999999998652 358999999999998877 8999999999999999999987 899887655 6888
Q ss_pred hHHHHHHHHHHHHHhhhhcCCceEEEEEeccchHHHHHHHhcCCCcccEEEEcCCcccc
Q 026555 91 DLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKI 149 (237)
Q Consensus 91 ~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~~~~vl~~~~~~~ 149 (237)
....++..+++++ + ..+..++-++.-|+.|.+|+..|.+- .+.-+|..-+...+
T Consensus 83 ~g~~sL~~V~dwl--~-~~g~~~~GLIAaSLSaRIAy~Va~~i--~lsfLitaVGVVnl 136 (294)
T PF02273_consen 83 IGKASLLTVIDWL--A-TRGIRRIGLIAASLSARIAYEVAADI--NLSFLITAVGVVNL 136 (294)
T ss_dssp HHHHHHHHHHHHH--H-HTT---EEEEEETTHHHHHHHHTTTS----SEEEEES--S-H
T ss_pred HhHHHHHHHHHHH--H-hcCCCcchhhhhhhhHHHHHHHhhcc--CcceEEEEeeeeeH
Confidence 9999999999999 4 44778899999999999999999854 36777776555544
No 94
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=99.35 E-value=5.7e-12 Score=104.45 Aligned_cols=138 Identities=16% Similarity=0.145 Sum_probs=109.0
Q ss_pred ccceeEeecCCcEEEEEEeecCCCCCcEEEEEEc--CCCCCCcCch--HHHHH---HHHhcCCEEEEeecCCCCCCCCCC
Q 026555 11 YDEEFILNSRRVKLFTCSWIPQNQEPKALIFICH--GYAMECSIGM--NSTAI---RLANEGYACYGIDYQGHGKSAGLS 83 (237)
Q Consensus 11 ~~~~~~~~~~g~~l~~~~~~~~~~~~~~~iv~~h--G~~~~~~~~~--~~~~~---~l~~~g~~v~~~d~~g~G~s~~~~ 83 (237)
.....+.+.||++|.-..|.|.+.++.|+++..+ .+......+. ....+ .++.+||.|+..|.||.|.|++..
T Consensus 19 ~~~v~V~MRDGvrL~~dIy~Pa~~g~~Pvll~~~~~Py~k~~~~~~~~~~~~p~~~~~aa~GYavV~qDvRG~~~SeG~~ 98 (563)
T COG2936 19 ERDVMVPMRDGVRLAADIYRPAGAGPLPVLLSRTRLPYRKRNGTFGPQLSALPQPAWFAAQGYAVVNQDVRGRGGSEGVF 98 (563)
T ss_pred eeeeeEEecCCeEEEEEEEccCCCCCCceeEEeeccccccccccCcchhhcccccceeecCceEEEEecccccccCCccc
Confidence 4457788999999999999999778899999999 4443321111 23334 688899999999999999999876
Q ss_pred CCcCChhhHHHHHHHHHHHHHhhhhcCCceEEEEEeccchHHHHHHHhcCCCcccEEEEcCCcccccc
Q 026555 84 GYIDNFDDLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKIAE 151 (237)
Q Consensus 84 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~~~~vl~~~~~~~~~ 151 (237)
....+ +-++|-.+.|+++++ +.....+|.++|.|.+|...+++|+..|..+++++..++..+...
T Consensus 99 ~~~~~--~E~~Dg~D~I~Wia~-QpWsNG~Vgm~G~SY~g~tq~~~Aa~~pPaLkai~p~~~~~D~y~ 163 (563)
T COG2936 99 DPESS--REAEDGYDTIEWLAK-QPWSNGNVGMLGLSYLGFTQLAAAALQPPALKAIAPTEGLVDRYR 163 (563)
T ss_pred ceecc--ccccchhHHHHHHHh-CCccCCeeeeecccHHHHHHHHHHhcCCchheeeccccccccccc
Confidence 55434 346677788888854 444678999999999999999999999988999999988887654
No 95
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=99.34 E-value=4e-11 Score=92.97 Aligned_cols=114 Identities=17% Similarity=0.262 Sum_probs=93.9
Q ss_pred cEEEEEEcCCCCCCcCchHHHHHHHHhc---CCEEEEeecCCCCCCCCC-----CCCcCChhhHHHHHHHHHHHHHhhhh
Q 026555 37 KALIFICHGYAMECSIGMNSTAIRLANE---GYACYGIDYQGHGKSAGL-----SGYIDNFDDLVDDCFNHFTSICEKEE 108 (237)
Q Consensus 37 ~~~iv~~hG~~~~~~~~~~~~~~~l~~~---g~~v~~~d~~g~G~s~~~-----~~~~~~~~~~~~d~~~~~~~~~~~~~ 108 (237)
+..+++++|.++-.+.| ..+.+.|.+. .|.|++..+.||-.++.. ....++++++++...++++..+....
T Consensus 2 ~~li~~IPGNPGlv~fY-~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~~~~~~~~~~sL~~QI~hk~~~i~~~~~~~~ 80 (266)
T PF10230_consen 2 RPLIVFIPGNPGLVEFY-EEFLSALYEKLNPQFEILGISHAGHSTSPSNSKFSPNGRLFSLQDQIEHKIDFIKELIPQKN 80 (266)
T ss_pred cEEEEEECCCCChHHHH-HHHHHHHHHhCCCCCeeEEecCCCCcCCcccccccCCCCccCHHHHHHHHHHHHHHHhhhhc
Confidence 57899999999999966 8888888754 699999999999776654 34568999999999999998854322
Q ss_pred cCCceEEEEEeccchHHHHHHHhcCC---CcccEEEEcCCcccccc
Q 026555 109 NKEKMRYLLGESMGGAMVLLLHRKKP---DYFDGAVLVAPMCKIAE 151 (237)
Q Consensus 109 ~~~~~~~l~G~S~Gg~~a~~~a~~~p---~~~~~~vl~~~~~~~~~ 151 (237)
....+++++|||+|++++++.+.+.+ .+|.+++++-|...-..
T Consensus 81 ~~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi~~ia 126 (266)
T PF10230_consen 81 KPNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTIEDIA 126 (266)
T ss_pred CCCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCcccccc
Confidence 25678999999999999999999999 77999999988765443
No 96
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=99.34 E-value=3.6e-11 Score=85.58 Aligned_cols=119 Identities=18% Similarity=0.343 Sum_probs=87.4
Q ss_pred EEEEEEeecCCCCCcEEEEEEcCCCC---CCcCc-hHHHHHHHHhcCCEEEEeecCCCCCCCCCCCCcCChhhHHHHHHH
Q 026555 23 KLFTCSWIPQNQEPKALIFICHGYAM---ECSIG-MNSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFN 98 (237)
Q Consensus 23 ~l~~~~~~~~~~~~~~~iv~~hG~~~---~~~~~-~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~d~~~ 98 (237)
++..+.- |...+..|+.|++|.-+. +...- ...+++.|.+.||.++.+|+||.|.|.+..+. .+-+ .+|..+
T Consensus 15 ~le~~~~-~~~~~~~~iAli~HPHPl~gGtm~nkvv~~la~~l~~~G~atlRfNfRgVG~S~G~fD~--GiGE-~~Da~a 90 (210)
T COG2945 15 RLEGRYE-PAKTPAAPIALICHPHPLFGGTMNNKVVQTLARALVKRGFATLRFNFRGVGRSQGEFDN--GIGE-LEDAAA 90 (210)
T ss_pred cceeccC-CCCCCCCceEEecCCCccccCccCCHHHHHHHHHHHhCCceEEeecccccccccCcccC--Ccch-HHHHHH
Confidence 3444333 333366889999997543 33221 24678999999999999999999999977543 2222 679999
Q ss_pred HHHHHHhhhhcCCceE-EEEEeccchHHHHHHHhcCCCcccEEEEcCCccc
Q 026555 99 HFTSICEKEENKEKMR-YLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCK 148 (237)
Q Consensus 99 ~~~~~~~~~~~~~~~~-~l~G~S~Gg~~a~~~a~~~p~~~~~~vl~~~~~~ 148 (237)
+++++ +.++...+. .+.|+|+|++|++.+|.+.|+ +...+.++|...
T Consensus 91 aldW~--~~~hp~s~~~~l~GfSFGa~Ia~~la~r~~e-~~~~is~~p~~~ 138 (210)
T COG2945 91 ALDWL--QARHPDSASCWLAGFSFGAYIAMQLAMRRPE-ILVFISILPPIN 138 (210)
T ss_pred HHHHH--HhhCCCchhhhhcccchHHHHHHHHHHhccc-ccceeeccCCCC
Confidence 99999 666666555 789999999999999999987 666666666655
No 97
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.33 E-value=4.2e-11 Score=99.75 Aligned_cols=123 Identities=11% Similarity=0.071 Sum_probs=96.5
Q ss_pred EEEEEEeecCCC-CCcEEEEEEcCCCCCCcCc----hHHHHHHHHhcCCEEEEeecCCCCCCCCCCCCcCChhhHHHHHH
Q 026555 23 KLFTCSWIPQNQ-EPKALIFICHGYAMECSIG----MNSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCF 97 (237)
Q Consensus 23 ~l~~~~~~~~~~-~~~~~iv~~hG~~~~~~~~----~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~d~~ 97 (237)
.+....|.|..+ .-+.+||+++.+-.-...+ -+++.+.|.+.||.|+.+|+++-+..... .+++++++.+.
T Consensus 200 l~eLiqY~P~te~v~~~PLLIVPp~INK~YIlDL~P~~SlVr~lv~qG~~VflIsW~nP~~~~r~----~~ldDYv~~i~ 275 (560)
T TIGR01839 200 VLELIQYKPITEQQHARPLLVVPPQINKFYIFDLSPEKSFVQYCLKNQLQVFIISWRNPDKAHRE----WGLSTYVDALK 275 (560)
T ss_pred ceEEEEeCCCCCCcCCCcEEEechhhhhhheeecCCcchHHHHHHHcCCeEEEEeCCCCChhhcC----CCHHHHHHHHH
Confidence 345566677543 3457899999876433322 05899999999999999999986655422 57899999999
Q ss_pred HHHHHHHhhhhcCCceEEEEEeccchHHHHH----HHhcCCC-cccEEEEcCCcccccc
Q 026555 98 NHFTSICEKEENKEKMRYLLGESMGGAMVLL----LHRKKPD-YFDGAVLVAPMCKIAE 151 (237)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~----~a~~~p~-~~~~~vl~~~~~~~~~ 151 (237)
++++.+ +...+.+++.++|||+||.+++. +++++++ +|+.++++.++.++..
T Consensus 276 ~Ald~V--~~~tG~~~vnl~GyC~GGtl~a~~~a~~aA~~~~~~V~sltllatplDf~~ 332 (560)
T TIGR01839 276 EAVDAV--RAITGSRDLNLLGACAGGLTCAALVGHLQALGQLRKVNSLTYLVSLLDSTM 332 (560)
T ss_pred HHHHHH--HHhcCCCCeeEEEECcchHHHHHHHHHHHhcCCCCceeeEEeeecccccCC
Confidence 999998 55667889999999999988886 7888886 7999999999888764
No 98
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.30 E-value=4.4e-11 Score=90.58 Aligned_cols=115 Identities=17% Similarity=0.220 Sum_probs=84.8
Q ss_pred EEEeecCCCCCcEEEEEEcCCCCCCcCchHHHHHHHHhcCCEEEEeecCCCCCCCCCCCCcCChhhHHHHHHHHHHHHHh
Q 026555 26 TCSWIPQNQEPKALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICE 105 (237)
Q Consensus 26 ~~~~~~~~~~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~d~~~~~~~~~~ 105 (237)
...+.|...+..|++||+||+......| ..+.++++.+||.|+.+|+...+... -..-++++.++++++.+
T Consensus 6 l~v~~P~~~g~yPVv~f~~G~~~~~s~Y-s~ll~hvAShGyIVV~~d~~~~~~~~--------~~~~~~~~~~vi~Wl~~ 76 (259)
T PF12740_consen 6 LLVYYPSSAGTYPVVLFLHGFLLINSWY-SQLLEHVASHGYIVVAPDLYSIGGPD--------DTDEVASAAEVIDWLAK 76 (259)
T ss_pred eEEEecCCCCCcCEEEEeCCcCCCHHHH-HHHHHHHHhCceEEEEecccccCCCC--------cchhHHHHHHHHHHHHh
Confidence 3455677667789999999999666644 99999999999999999976543311 11224445555555422
Q ss_pred h---h-----hcCCceEEEEEeccchHHHHHHHhcC-----CCcccEEEEcCCcccc
Q 026555 106 K---E-----ENKEKMRYLLGESMGGAMVLLLHRKK-----PDYFDGAVLVAPMCKI 149 (237)
Q Consensus 106 ~---~-----~~~~~~~~l~G~S~Gg~~a~~~a~~~-----p~~~~~~vl~~~~~~~ 149 (237)
. . +.+..++.+.|||.||-++..++..+ +.++++++++.|....
T Consensus 77 ~L~~~l~~~v~~D~s~l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPVdG~ 133 (259)
T PF12740_consen 77 GLESKLPLGVKPDFSKLALAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPVDGM 133 (259)
T ss_pred cchhhccccccccccceEEeeeCCCCHHHHHHHhhhcccccccceeEEEEecccccc
Confidence 1 1 23567899999999999999988887 5689999999998853
No 99
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=99.27 E-value=7.2e-11 Score=89.17 Aligned_cols=110 Identities=15% Similarity=0.112 Sum_probs=75.9
Q ss_pred cEEEEEEcCCCCCCcCchHHHHHHHHh--------cCCEEEEeecCCCCCCCCCCCCcCChhhHHHHHHHHHHHHHhhh-
Q 026555 37 KALIFICHGYAMECSIGMNSTAIRLAN--------EGYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEKE- 107 (237)
Q Consensus 37 ~~~iv~~hG~~~~~~~~~~~~~~~l~~--------~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~d~~~~~~~~~~~~- 107 (237)
+.+|||+||.+++...+ +.++..+.+ ..+++++.|+......-.. ..+.+..+-+.+.++.+++..
T Consensus 4 g~pVlFIhG~~Gs~~q~-rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~~~g----~~l~~q~~~~~~~i~~i~~~~~ 78 (225)
T PF07819_consen 4 GIPVLFIHGNAGSYKQV-RSLASELQRKALLNDNSSHFDFFTVDFNEELSAFHG----RTLQRQAEFLAEAIKYILELYK 78 (225)
T ss_pred CCEEEEECcCCCCHhHH-HHHHHHHhhhhhhccCccceeEEEeccCcccccccc----ccHHHHHHHHHHHHHHHHHhhh
Confidence 55799999999988866 777666522 1478889998765322211 234444555555555553322
Q ss_pred --hcCCceEEEEEeccchHHHHHHHhcCC---CcccEEEEcCCcccccc
Q 026555 108 --ENKEKMRYLLGESMGGAMVLLLHRKKP---DYFDGAVLVAPMCKIAE 151 (237)
Q Consensus 108 --~~~~~~~~l~G~S~Gg~~a~~~a~~~p---~~~~~~vl~~~~~~~~~ 151 (237)
....++++++||||||.++..++...+ +.++++|.++++....+
T Consensus 79 ~~~~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~tPh~g~~ 127 (225)
T PF07819_consen 79 SNRPPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGTPHRGSP 127 (225)
T ss_pred hccCCCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEcCCCCCcc
Confidence 346789999999999999988876543 57999999998877654
No 100
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=99.26 E-value=6.9e-11 Score=89.94 Aligned_cols=101 Identities=20% Similarity=0.259 Sum_probs=78.6
Q ss_pred EEEEEEcCCCCCCcCchHHHHHHHHhcCCEEEEeecCCCCCCCCCCCCcCChhhHHHHHHHHHHHHHhhhhcCCceEEEE
Q 026555 38 ALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEKEENKEKMRYLL 117 (237)
Q Consensus 38 ~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~ 117 (237)
++|+++|+.+++...| .++++.+....+.|+.++.+|.+... ....++++++++..+.|... ....++.++
T Consensus 1 ~~lf~~p~~gG~~~~y-~~la~~l~~~~~~v~~i~~~~~~~~~---~~~~si~~la~~y~~~I~~~-----~~~gp~~L~ 71 (229)
T PF00975_consen 1 RPLFCFPPAGGSASSY-RPLARALPDDVIGVYGIEYPGRGDDE---PPPDSIEELASRYAEAIRAR-----QPEGPYVLA 71 (229)
T ss_dssp -EEEEESSTTCSGGGG-HHHHHHHTTTEEEEEEECSTTSCTTS---HEESSHHHHHHHHHHHHHHH-----TSSSSEEEE
T ss_pred CeEEEEcCCccCHHHH-HHHHHhCCCCeEEEEEEecCCCCCCC---CCCCCHHHHHHHHHHHhhhh-----CCCCCeeeh
Confidence 3699999999988877 99999997644899999999998222 12257888888877777665 133499999
Q ss_pred EeccchHHHHHHHhc---CCCcccEEEEcCCcc
Q 026555 118 GESMGGAMVLLLHRK---KPDYFDGAVLVAPMC 147 (237)
Q Consensus 118 G~S~Gg~~a~~~a~~---~p~~~~~~vl~~~~~ 147 (237)
|||+||.+|.+.|.+ ....+..++++++..
T Consensus 72 G~S~Gg~lA~E~A~~Le~~G~~v~~l~liD~~~ 104 (229)
T PF00975_consen 72 GWSFGGILAFEMARQLEEAGEEVSRLILIDSPP 104 (229)
T ss_dssp EETHHHHHHHHHHHHHHHTT-SESEEEEESCSS
T ss_pred ccCccHHHHHHHHHHHHHhhhccCceEEecCCC
Confidence 999999999999875 345699999998543
No 101
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=99.26 E-value=4.3e-11 Score=96.61 Aligned_cols=141 Identities=16% Similarity=0.179 Sum_probs=111.3
Q ss_pred cCccccceeEeecCCcEEEEEEeecCCCCCcEEEEEEcCCCCCCcCch-----HHHHHHHHhcCCEEEEeecCCCCCCCC
Q 026555 7 HNIKYDEEFILNSRRVKLFTCSWIPQNQEPKALIFICHGYAMECSIGM-----NSTAIRLANEGYACYGIDYQGHGKSAG 81 (237)
Q Consensus 7 ~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~iv~~hG~~~~~~~~~-----~~~~~~l~~~g~~v~~~d~~g~G~s~~ 81 (237)
.+.+.++..+.+.||..+...+..... +++|+|++.||+-.++..|. +.++=.|++.||.|+.-+.||.-.|.+
T Consensus 44 ~gy~~E~h~V~T~DgYiL~lhRIp~~~-~~rp~Vll~HGLl~sS~~Wv~n~p~~sLaf~LadaGYDVWLgN~RGn~ySr~ 122 (403)
T KOG2624|consen 44 YGYPVEEHEVTTEDGYILTLHRIPRGK-KKRPVVLLQHGLLASSSSWVLNGPEQSLAFLLADAGYDVWLGNNRGNTYSRK 122 (403)
T ss_pred cCCceEEEEEEccCCeEEEEeeecCCC-CCCCcEEEeeccccccccceecCccccHHHHHHHcCCceeeecCcCcccchh
Confidence 356678888999999976666664443 77899999999999888774 467788999999999999999766653
Q ss_pred CC---------CCcCChhhHHH-HHHHHHHHHHhhhhcCCceEEEEEeccchHHHHHHHhcCCC---cccEEEEcCCccc
Q 026555 82 LS---------GYIDNFDDLVD-DCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPD---YFDGAVLVAPMCK 148 (237)
Q Consensus 82 ~~---------~~~~~~~~~~~-d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~---~~~~~vl~~~~~~ 148 (237)
.. --..+++++.. |+.+.|+++++.. +.++++.+|||.|+......+...|+ +|+.+++++|...
T Consensus 123 h~~l~~~~~~~FW~FS~~Em~~yDLPA~IdyIL~~T--~~~kl~yvGHSQGtt~~fv~lS~~p~~~~kI~~~~aLAP~~~ 200 (403)
T KOG2624|consen 123 HKKLSPSSDKEFWDFSWHEMGTYDLPAMIDYILEKT--GQEKLHYVGHSQGTTTFFVMLSERPEYNKKIKSFIALAPAAF 200 (403)
T ss_pred hcccCCcCCcceeecchhhhhhcCHHHHHHHHHHhc--cccceEEEEEEccchhheehhcccchhhhhhheeeeecchhh
Confidence 21 11246677655 9999999996543 66899999999999999888877764 6999999999985
Q ss_pred cc
Q 026555 149 IA 150 (237)
Q Consensus 149 ~~ 150 (237)
..
T Consensus 201 ~k 202 (403)
T KOG2624|consen 201 PK 202 (403)
T ss_pred hc
Confidence 54
No 102
>PRK10115 protease 2; Provisional
Probab=99.26 E-value=8.3e-11 Score=102.49 Aligned_cols=143 Identities=13% Similarity=0.257 Sum_probs=105.7
Q ss_pred ccccceeEeecCCcEEEEEE-eecCC--CCCcEEEEEEcCCCCCCc-CchHHHHHHHHhcCCEEEEeecCCCCCCCCC--
Q 026555 9 IKYDEEFILNSRRVKLFTCS-WIPQN--QEPKALIFICHGYAMECS-IGMNSTAIRLANEGYACYGIDYQGHGKSAGL-- 82 (237)
Q Consensus 9 ~~~~~~~~~~~~g~~l~~~~-~~~~~--~~~~~~iv~~hG~~~~~~-~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~-- 82 (237)
+..+...+...||.+|.+.. +.|.. .++.|+||++||..+... ..|......|.++||.|+.++.||-|.=...
T Consensus 414 ~~~e~v~~~s~DG~~Ip~~l~~~~~~~~~~~~P~ll~~hGg~~~~~~p~f~~~~~~l~~rG~~v~~~n~RGs~g~G~~w~ 493 (686)
T PRK10115 414 YRSEHLWITARDGVEVPVSLVYHRKHFRKGHNPLLVYGYGSYGASIDADFSFSRLSLLDRGFVYAIVHVRGGGELGQQWY 493 (686)
T ss_pred cEEEEEEEECCCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCccHHHHHHHHCCcEEEEEEcCCCCccCHHHH
Confidence 34455667789999999844 44531 245699999999665543 2236666788899999999999986533211
Q ss_pred -CCCcCChhhHHHHHHHHHHHHHhhhhcCCceEEEEEeccchHHHHHHHhcCCCcccEEEEcCCcccccc
Q 026555 83 -SGYIDNFDDLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKIAE 151 (237)
Q Consensus 83 -~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~~~~vl~~~~~~~~~ 151 (237)
......-..-.+|+.+++++++++...+.+++.+.|.|.||+++...+.++|++++++|...|..++..
T Consensus 494 ~~g~~~~k~~~~~D~~a~~~~Lv~~g~~d~~rl~i~G~S~GG~l~~~~~~~~Pdlf~A~v~~vp~~D~~~ 563 (686)
T PRK10115 494 EDGKFLKKKNTFNDYLDACDALLKLGYGSPSLCYGMGGSAGGMLMGVAINQRPELFHGVIAQVPFVDVVT 563 (686)
T ss_pred HhhhhhcCCCcHHHHHHHHHHHHHcCCCChHHeEEEEECHHHHHHHHHHhcChhheeEEEecCCchhHhh
Confidence 000001113477888999998766666788999999999999999999999999999999999988764
No 103
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=99.23 E-value=1.3e-10 Score=86.89 Aligned_cols=125 Identities=18% Similarity=0.179 Sum_probs=85.5
Q ss_pred EEEEEeecCCC--CCcEEEEEEcCCCCCCcCchHH-HHHHHHh-cCCEEEEeecCCCCCCCCC-C---CCcCChhhHHHH
Q 026555 24 LFTCSWIPQNQ--EPKALIFICHGYAMECSIGMNS-TAIRLAN-EGYACYGIDYQGHGKSAGL-S---GYIDNFDDLVDD 95 (237)
Q Consensus 24 l~~~~~~~~~~--~~~~~iv~~hG~~~~~~~~~~~-~~~~l~~-~g~~v~~~d~~g~G~s~~~-~---~~~~~~~~~~~d 95 (237)
|.|+.|.|+.. ++.|.||++||.+.+...+... -...+++ +||.|+.++.......... . .....-.+-...
T Consensus 1 l~Y~lYvP~~~~~~~~PLVv~LHG~~~~a~~~~~~s~~~~lAd~~GfivvyP~~~~~~~~~~cw~w~~~~~~~g~~d~~~ 80 (220)
T PF10503_consen 1 LSYRLYVPPGAPRGPVPLVVVLHGCGQSAEDFAAGSGWNALADREGFIVVYPEQSRRANPQGCWNWFSDDQQRGGGDVAF 80 (220)
T ss_pred CcEEEecCCCCCCCCCCEEEEeCCCCCCHHHHHhhcCHHHHhhcCCeEEEcccccccCCCCCcccccccccccCccchhh
Confidence 46889988743 3469999999999987754221 1234544 4888888885432111110 0 000011122455
Q ss_pred HHHHHHHHHhhhhcCCceEEEEEeccchHHHHHHHhcCCCcccEEEEcCCccc
Q 026555 96 CFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCK 148 (237)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~~~~vl~~~~~~ 148 (237)
+.++++.+..+...+..+|++.|+|.||+++..++..+|+.++++...++...
T Consensus 81 i~~lv~~v~~~~~iD~~RVyv~G~S~Gg~ma~~la~~~pd~faa~a~~sG~~~ 133 (220)
T PF10503_consen 81 IAALVDYVAARYNIDPSRVYVTGLSNGGMMANVLACAYPDLFAAVAVVSGVPY 133 (220)
T ss_pred HHHHHHhHhhhcccCCCceeeEEECHHHHHHHHHHHhCCccceEEEeeccccc
Confidence 77778888666777889999999999999999999999999999988876654
No 104
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=99.19 E-value=2e-09 Score=83.18 Aligned_cols=109 Identities=18% Similarity=0.236 Sum_probs=73.0
Q ss_pred CcEEEEEEcCCCCCCc--CchHHHHHHHHhcCCEEEEeecC----CCCCCCCCCCCcCChhhHHHHHHHHHHHHHhhhhc
Q 026555 36 PKALIFICHGYAMECS--IGMNSTAIRLANEGYACYGIDYQ----GHGKSAGLSGYIDNFDDLVDDCFNHFTSICEKEEN 109 (237)
Q Consensus 36 ~~~~iv~~hG~~~~~~--~~~~~~~~~l~~~g~~v~~~d~~----g~G~s~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 109 (237)
...+|||+.|++.... .|+..+++.|.+.||.++-+.++ |+|. .++++-++|+.+++++++..+..
T Consensus 32 ~~~~llfIGGLtDGl~tvpY~~~La~aL~~~~wsl~q~~LsSSy~G~G~--------~SL~~D~~eI~~~v~ylr~~~~g 103 (303)
T PF08538_consen 32 APNALLFIGGLTDGLLTVPYLPDLAEALEETGWSLFQVQLSSSYSGWGT--------SSLDRDVEEIAQLVEYLRSEKGG 103 (303)
T ss_dssp SSSEEEEE--TT--TT-STCHHHHHHHHT-TT-EEEEE--GGGBTTS-S----------HHHHHHHHHHHHHHHHHHS--
T ss_pred CCcEEEEECCCCCCCCCCchHHHHHHHhccCCeEEEEEEecCccCCcCc--------chhhhHHHHHHHHHHHHHHhhcc
Confidence 4668999999976443 46688999998789999998865 4443 46788899999999999554322
Q ss_pred --CCceEEEEEeccchHHHHHHHhcCC-----CcccEEEEcCCccccccc
Q 026555 110 --KEKMRYLLGESMGGAMVLLLHRKKP-----DYFDGAVLVAPMCKIAEN 152 (237)
Q Consensus 110 --~~~~~~l~G~S~Gg~~a~~~a~~~p-----~~~~~~vl~~~~~~~~~~ 152 (237)
+.++|+|+|||-|..-+++|+.... ..|+++||-+|..+-...
T Consensus 104 ~~~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVSDREa~ 153 (303)
T PF08538_consen 104 HFGREKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVSDREAI 153 (303)
T ss_dssp ----S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE---TTST
T ss_pred ccCCccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCCChhHh
Confidence 5689999999999999999987542 569999999999887643
No 105
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=99.19 E-value=8.4e-11 Score=88.53 Aligned_cols=97 Identities=28% Similarity=0.308 Sum_probs=73.6
Q ss_pred HHHHHHHHhcCCEEEEeecCCCCCCCCC---CCCcCChhhHHHHHHHHHHHHHhhhhcCCceEEEEEeccchHHHHHHHh
Q 026555 55 NSTAIRLANEGYACYGIDYQGHGKSAGL---SGYIDNFDDLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHR 131 (237)
Q Consensus 55 ~~~~~~l~~~g~~v~~~d~~g~G~s~~~---~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~ 131 (237)
......|++.||.|+.+|+||.+..... ......-...++|+.++++++.++...+.+++.++|+|+||.+++.++.
T Consensus 4 ~~~~~~la~~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~~~ 83 (213)
T PF00326_consen 4 NWNAQLLASQGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLAAT 83 (213)
T ss_dssp SHHHHHHHTTT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHHHH
T ss_pred eHHHHHHHhCCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccccccceeEEEEcccccccccchhhc
Confidence 4567888899999999999998743211 0110122345889999999997666667899999999999999999999
Q ss_pred cCCCcccEEEEcCCcccccc
Q 026555 132 KKPDYFDGAVLVAPMCKIAE 151 (237)
Q Consensus 132 ~~p~~~~~~vl~~~~~~~~~ 151 (237)
++|++++++|..++..+...
T Consensus 84 ~~~~~f~a~v~~~g~~d~~~ 103 (213)
T PF00326_consen 84 QHPDRFKAAVAGAGVSDLFS 103 (213)
T ss_dssp HTCCGSSEEEEESE-SSTTC
T ss_pred ccceeeeeeeccceecchhc
Confidence 99999999999998877643
No 106
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=99.16 E-value=2.5e-10 Score=86.16 Aligned_cols=114 Identities=18% Similarity=0.145 Sum_probs=63.9
Q ss_pred CCCcEEEEEEcCCCCCCcCchHHHHH-HHHhcCCEEEEeecCC------CCCC--C-----CCCC----CcCChhhHHHH
Q 026555 34 QEPKALIFICHGYAMECSIGMNSTAI-RLANEGYACYGIDYQG------HGKS--A-----GLSG----YIDNFDDLVDD 95 (237)
Q Consensus 34 ~~~~~~iv~~hG~~~~~~~~~~~~~~-~l~~~g~~v~~~d~~g------~G~s--~-----~~~~----~~~~~~~~~~d 95 (237)
++..++||++||+|.+...+ ..+.. .+......++.++-|. .|.. . .... ....+.+.++.
T Consensus 11 ~~~~~lvi~LHG~G~~~~~~-~~~~~~~~~~~~~~~i~p~ap~~~~~~~~g~~~~~Wf~~~~~~~~~~~~~~~i~~s~~~ 89 (216)
T PF02230_consen 11 GKAKPLVILLHGYGDSEDLF-ALLAELNLALPNTRFISPRAPSRPVTVPGGYRMPAWFDIYDFDPEGPEDEAGIEESAER 89 (216)
T ss_dssp ST-SEEEEEE--TTS-HHHH-HHHHHHHTCSTTEEEEEE---EEE-GGGTT-EEE-SS-BSCSSSSSEB-HHHHHHHHHH
T ss_pred CCCceEEEEECCCCCCcchh-HHHHhhcccCCceEEEeccCCCCCcccccccCCCceeeccCCCcchhhhHHHHHHHHHH
Confidence 36789999999999988544 33333 1222346677665432 1220 0 0000 00122233444
Q ss_pred HHHHHHHHHhhhhcCCceEEEEEeccchHHHHHHHhcCCCcccEEEEcCCcccc
Q 026555 96 CFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKI 149 (237)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~~~~vl~~~~~~~ 149 (237)
+.++++...+ ...+.+++++.|+|+||.+++.++.++|+.+.++|.+|+....
T Consensus 90 l~~li~~~~~-~~i~~~ri~l~GFSQGa~~al~~~l~~p~~~~gvv~lsG~~~~ 142 (216)
T PF02230_consen 90 LDELIDEEVA-YGIDPSRIFLGGFSQGAAMALYLALRYPEPLAGVVALSGYLPP 142 (216)
T ss_dssp HHHHHHHHHH-TT--GGGEEEEEETHHHHHHHHHHHCTSSTSSEEEEES---TT
T ss_pred HHHHHHHHHH-cCCChhheehhhhhhHHHHHHHHHHHcCcCcCEEEEeeccccc
Confidence 5555554432 2346689999999999999999999999999999999877644
No 107
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.11 E-value=7.9e-10 Score=82.13 Aligned_cols=103 Identities=17% Similarity=0.184 Sum_probs=77.7
Q ss_pred CCcEEEEEEcCCCCCCcCchHHHHHHHHhcCCEEEEeecCCCCCCCCCCCCcCChhhHHHHHHHHHH-HHHhhhhcCCce
Q 026555 35 EPKALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFT-SICEKEENKEKM 113 (237)
Q Consensus 35 ~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~d~~~~~~-~~~~~~~~~~~~ 113 (237)
+.+..++.+|=-|++...| +.+...|... ..++.+++||+|.-.+.... .+++.+++.+...+. .. ..++
T Consensus 5 ~~~~~L~cfP~AGGsa~~f-r~W~~~lp~~-iel~avqlPGR~~r~~ep~~-~di~~Lad~la~el~~~~------~d~P 75 (244)
T COG3208 5 GARLRLFCFPHAGGSASLF-RSWSRRLPAD-IELLAVQLPGRGDRFGEPLL-TDIESLADELANELLPPL------LDAP 75 (244)
T ss_pred CCCceEEEecCCCCCHHHH-HHHHhhCCch-hheeeecCCCcccccCCccc-ccHHHHHHHHHHHhcccc------CCCC
Confidence 3456788888888888866 8888888764 89999999999976544333 578888888887776 33 5679
Q ss_pred EEEEEeccchHHHHHHHhcCC---CcccEEEEcCCc
Q 026555 114 RYLLGESMGGAMVLLLHRKKP---DYFDGAVLVAPM 146 (237)
Q Consensus 114 ~~l~G~S~Gg~~a~~~a~~~p---~~~~~~vl~~~~ 146 (237)
+.++||||||++|.++|.+.. -...++.+.++.
T Consensus 76 ~alfGHSmGa~lAfEvArrl~~~g~~p~~lfisg~~ 111 (244)
T COG3208 76 FALFGHSMGAMLAFEVARRLERAGLPPRALFISGCR 111 (244)
T ss_pred eeecccchhHHHHHHHHHHHHHcCCCcceEEEecCC
Confidence 999999999999999997632 226666665443
No 108
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=99.10 E-value=4.9e-10 Score=84.16 Aligned_cols=101 Identities=22% Similarity=0.303 Sum_probs=73.1
Q ss_pred EEEEcCCCCC---CcCchHHHHHHHHh-cCCEEEEeecCCCCCCCCCCCCcCChhhHHHHHHHHHHHHHhh---hhcCCc
Q 026555 40 IFICHGYAME---CSIGMNSTAIRLAN-EGYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEK---EENKEK 112 (237)
Q Consensus 40 iv~~hG~~~~---~~~~~~~~~~~l~~-~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~d~~~~~~~~~~~---~~~~~~ 112 (237)
||++||.+-. .... ..+...+++ .|+.|+.+|+|=. + ...+.+.++|+.++++++++. ...+.+
T Consensus 1 v~~~HGGg~~~g~~~~~-~~~~~~la~~~g~~v~~~~Yrl~---p-----~~~~p~~~~D~~~a~~~l~~~~~~~~~d~~ 71 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKESH-WPFAARLAAERGFVVVSIDYRLA---P-----EAPFPAALEDVKAAYRWLLKNADKLGIDPE 71 (211)
T ss_dssp EEEE--STTTSCGTTTH-HHHHHHHHHHHTSEEEEEE---T---T-----TSSTTHHHHHHHHHHHHHHHTHHHHTEEEE
T ss_pred CEEECCcccccCChHHH-HHHHHHHHhhccEEEEEeecccc---c-----cccccccccccccceeeecccccccccccc
Confidence 7899997633 3333 566677765 7999999999822 1 146778899999999999543 135678
Q ss_pred eEEEEEeccchHHHHHHHhcCC----CcccEEEEcCCcccc
Q 026555 113 MRYLLGESMGGAMVLLLHRKKP----DYFDGAVLVAPMCKI 149 (237)
Q Consensus 113 ~~~l~G~S~Gg~~a~~~a~~~p----~~~~~~vl~~~~~~~ 149 (237)
+++++|+|.||.+++.++.... ..++++++++|..+.
T Consensus 72 ~i~l~G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~~d~ 112 (211)
T PF07859_consen 72 RIVLIGDSAGGHLALSLALRARDRGLPKPKGIILISPWTDL 112 (211)
T ss_dssp EEEEEEETHHHHHHHHHHHHHHHTTTCHESEEEEESCHSST
T ss_pred ceEEeecccccchhhhhhhhhhhhcccchhhhhcccccccc
Confidence 9999999999999998886432 249999999998766
No 109
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=99.10 E-value=2e-10 Score=85.73 Aligned_cols=90 Identities=17% Similarity=0.214 Sum_probs=56.1
Q ss_pred EEEEEEcCCCC-CCcCchHHHHHHHHhcCCE---EEEeecCCCCCCCCCCCCcCChhhHHHHHHHHHHHHHhhhhcCCce
Q 026555 38 ALIFICHGYAM-ECSIGMNSTAIRLANEGYA---CYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEKEENKEKM 113 (237)
Q Consensus 38 ~~iv~~hG~~~-~~~~~~~~~~~~l~~~g~~---v~~~d~~g~G~s~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 113 (237)
.+|||+||.++ ....| ..+++.|.++||. ++++++-....+...... ....+.+.++.++++.++ ..-+. +
T Consensus 2 ~PVVlVHG~~~~~~~~w-~~~~~~l~~~GY~~~~vya~tyg~~~~~~~~~~~-~~~~~~~~~l~~fI~~Vl--~~TGa-k 76 (219)
T PF01674_consen 2 RPVVLVHGTGGNAYSNW-STLAPYLKAAGYCDSEVYALTYGSGNGSPSVQNA-HMSCESAKQLRAFIDAVL--AYTGA-K 76 (219)
T ss_dssp --EEEE--TTTTTCGGC-CHHHHHHHHTT--CCCEEEE--S-CCHHTHHHHH-HB-HHHHHHHHHHHHHHH--HHHT---
T ss_pred CCEEEECCCCcchhhCH-HHHHHHHHHcCCCcceeEeccCCCCCCCCccccc-ccchhhHHHHHHHHHHHH--HhhCC-E
Confidence 35999999998 44556 8999999999998 799998433321211000 112344578888888884 33356 9
Q ss_pred EEEEEeccchHHHHHHHhc
Q 026555 114 RYLLGESMGGAMVLLLHRK 132 (237)
Q Consensus 114 ~~l~G~S~Gg~~a~~~a~~ 132 (237)
|.|+||||||.++..+++-
T Consensus 77 VDIVgHS~G~~iaR~yi~~ 95 (219)
T PF01674_consen 77 VDIVGHSMGGTIARYYIKG 95 (219)
T ss_dssp EEEEEETCHHHHHHHHHHH
T ss_pred EEEEEcCCcCHHHHHHHHH
Confidence 9999999999999999864
No 110
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=99.08 E-value=2.7e-10 Score=90.62 Aligned_cols=116 Identities=12% Similarity=0.113 Sum_probs=73.9
Q ss_pred CCcEEEEEEcCCCCCC--cCchHHHHHHHHh---cCCEEEEeecCCCCCCCCCCCCcCChhhHHHHHHHHHHHHHhhhhc
Q 026555 35 EPKALIFICHGYAMEC--SIGMNSTAIRLAN---EGYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEKEEN 109 (237)
Q Consensus 35 ~~~~~iv~~hG~~~~~--~~~~~~~~~~l~~---~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 109 (237)
..+|++|++|||.++. ..|+..+.+.+.+ .+++|+++|+...-... -.............+..+++.+......
T Consensus 69 ~~~pt~iiiHGw~~~~~~~~~~~~~~~all~~~~~d~NVI~VDWs~~a~~~-Y~~a~~n~~~vg~~la~~l~~L~~~~g~ 147 (331)
T PF00151_consen 69 PSKPTVIIIHGWTGSGSSESWIQDMIKALLQKDTGDYNVIVVDWSRGASNN-YPQAVANTRLVGRQLAKFLSFLINNFGV 147 (331)
T ss_dssp TTSEEEEEE--TT-TT-TTTHHHHHHHHHHCC--S-EEEEEEE-HHHHSS--HHHHHHHHHHHHHHHHHHHHHHHHHH--
T ss_pred CCCCeEEEEcCcCCcccchhHHHHHHHHHHhhccCCceEEEEcchhhcccc-ccchhhhHHHHHHHHHHHHHHHHhhcCC
Confidence 4589999999999888 3566677776544 37999999995332111 0000012344455666777777544556
Q ss_pred CCceEEEEEeccchHHHHHHHhcCCC--cccEEEEcCCcccccc
Q 026555 110 KEKMRYLLGESMGGAMVLLLHRKKPD--YFDGAVLVAPMCKIAE 151 (237)
Q Consensus 110 ~~~~~~l~G~S~Gg~~a~~~a~~~p~--~~~~~vl~~~~~~~~~ 151 (237)
+.++++++|||+||.+|-.+.+.... ++.++..+.|+.....
T Consensus 148 ~~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDPAgP~F~ 191 (331)
T PF00151_consen 148 PPENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDPAGPLFE 191 (331)
T ss_dssp -GGGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-B-TTTT
T ss_pred ChhHEEEEeeccchhhhhhhhhhccCcceeeEEEecCccccccc
Confidence 78999999999999999999988776 8999999988876543
No 111
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=99.08 E-value=1.4e-09 Score=89.57 Aligned_cols=93 Identities=18% Similarity=0.225 Sum_probs=74.5
Q ss_pred chHHHHHHHHhcCCEEEEeecCCCCCCCCCCCCcCChhhHHHHHHHHHHHHHhhhhcCCceEEEEEeccchHHHHHHHhc
Q 026555 53 GMNSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRK 132 (237)
Q Consensus 53 ~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~ 132 (237)
++..+.+.|.+.||.+ ..|++|+|.+-+.. ...++..+++.++++.+ ....+..+++++||||||.+++.++..
T Consensus 109 ~~~~li~~L~~~GY~~-~~dL~g~gYDwR~~---~~~~~~~~~Lk~lIe~~--~~~~g~~kV~LVGHSMGGlva~~fl~~ 182 (440)
T PLN02733 109 YFHDMIEQLIKWGYKE-GKTLFGFGYDFRQS---NRLPETMDGLKKKLETV--YKASGGKKVNIISHSMGGLLVKCFMSL 182 (440)
T ss_pred HHHHHHHHHHHcCCcc-CCCcccCCCCcccc---ccHHHHHHHHHHHHHHH--HHHcCCCCEEEEEECHhHHHHHHHHHH
Confidence 4489999999999855 88999999886432 23566778888888887 445567899999999999999999988
Q ss_pred CCCc----ccEEEEcCCcccccc
Q 026555 133 KPDY----FDGAVLVAPMCKIAE 151 (237)
Q Consensus 133 ~p~~----~~~~vl~~~~~~~~~ 151 (237)
+|+. |+++|.++++.....
T Consensus 183 ~p~~~~k~I~~~I~la~P~~Gs~ 205 (440)
T PLN02733 183 HSDVFEKYVNSWIAIAAPFQGAP 205 (440)
T ss_pred CCHhHHhHhccEEEECCCCCCCc
Confidence 8863 789999988766543
No 112
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.08 E-value=7e-10 Score=82.88 Aligned_cols=119 Identities=15% Similarity=0.126 Sum_probs=88.8
Q ss_pred EEEEEEeecCCCCCcEEEEEEcCCCCCCcCchHHHHHHHHhcCCEEEEeecCCCCCCCCCCCCcCChhhHHHHHHHHHHH
Q 026555 23 KLFTCSWIPQNQEPKALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTS 102 (237)
Q Consensus 23 ~l~~~~~~~~~~~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~d~~~~~~~ 102 (237)
......+.|...+..|+|+|+||+......| ..+...++.+||.|+++++-.--. . +-.+-+++..+++++
T Consensus 32 PkpLlI~tP~~~G~yPVilF~HG~~l~ns~Y-s~lL~HIASHGfIVVAPQl~~~~~-p-------~~~~Ei~~aa~V~~W 102 (307)
T PF07224_consen 32 PKPLLIVTPSEAGTYPVILFLHGFNLYNSFY-SQLLAHIASHGFIVVAPQLYTLFP-P-------DGQDEIKSAASVINW 102 (307)
T ss_pred CCCeEEecCCcCCCccEEEEeechhhhhHHH-HHHHHHHhhcCeEEEechhhcccC-C-------CchHHHHHHHHHHHH
Confidence 4456667777767789999999999887755 999999999999999999864311 1 122335666666666
Q ss_pred HHhh--------hhcCCceEEEEEeccchHHHHHHHhcCC--CcccEEEEcCCccccc
Q 026555 103 ICEK--------EENKEKMRYLLGESMGGAMVLLLHRKKP--DYFDGAVLVAPMCKIA 150 (237)
Q Consensus 103 ~~~~--------~~~~~~~~~l~G~S~Gg~~a~~~a~~~p--~~~~~~vl~~~~~~~~ 150 (237)
+.+. .+.+..++.++|||.||-.|..+|..+. -.+.++|.+.|.....
T Consensus 103 L~~gL~~~Lp~~V~~nl~klal~GHSrGGktAFAlALg~a~~lkfsaLIGiDPV~G~~ 160 (307)
T PF07224_consen 103 LPEGLQHVLPENVEANLSKLALSGHSRGGKTAFALALGYATSLKFSALIGIDPVAGTS 160 (307)
T ss_pred HHhhhhhhCCCCcccccceEEEeecCCccHHHHHHHhcccccCchhheecccccCCCC
Confidence 6432 2335678999999999999998888763 3488888888877654
No 113
>COG0400 Predicted esterase [General function prediction only]
Probab=99.08 E-value=8.2e-10 Score=81.72 Aligned_cols=115 Identities=17% Similarity=0.121 Sum_probs=75.2
Q ss_pred CCcEEEEEEcCCCCCCcCchHHHHHHHHhcCCEEEEeecCC--CCCCC---CCCCCcCChhhHHHH---HHHHHHHHHhh
Q 026555 35 EPKALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQG--HGKSA---GLSGYIDNFDDLVDD---CFNHFTSICEK 106 (237)
Q Consensus 35 ~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g--~G~s~---~~~~~~~~~~~~~~d---~~~~~~~~~~~ 106 (237)
+..|+||++||+|++...+ .++...+..+ +.++.+.-+- .|.-. ......++.+++..+ +.++++.+.++
T Consensus 16 p~~~~iilLHG~Ggde~~~-~~~~~~~~P~-~~~is~rG~v~~~g~~~~f~~~~~~~~d~edl~~~~~~~~~~l~~~~~~ 93 (207)
T COG0400 16 PAAPLLILLHGLGGDELDL-VPLPELILPN-ATLVSPRGPVAENGGPRFFRRYDEGSFDQEDLDLETEKLAEFLEELAEE 93 (207)
T ss_pred CCCcEEEEEecCCCChhhh-hhhhhhcCCC-CeEEcCCCCccccCcccceeecCCCccchhhHHHHHHHHHHHHHHHHHH
Confidence 5567999999999888876 4555555444 6665543221 11110 001111344444444 44444444334
Q ss_pred hhcCCceEEEEEeccchHHHHHHHhcCCCcccEEEEcCCcccccc
Q 026555 107 EENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKIAE 151 (237)
Q Consensus 107 ~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~~~~vl~~~~~~~~~ 151 (237)
...+.++++++|+|.|+++++....++|+.++++|+.++..-...
T Consensus 94 ~gi~~~~ii~~GfSqGA~ial~~~l~~~~~~~~ail~~g~~~~~~ 138 (207)
T COG0400 94 YGIDSSRIILIGFSQGANIALSLGLTLPGLFAGAILFSGMLPLEP 138 (207)
T ss_pred hCCChhheEEEecChHHHHHHHHHHhCchhhccchhcCCcCCCCC
Confidence 444568999999999999999999999999999999988876653
No 114
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=99.06 E-value=2.3e-09 Score=81.42 Aligned_cols=113 Identities=18% Similarity=0.189 Sum_probs=77.6
Q ss_pred CCcEEEEEEcCCCCCCcCchHHHHHHHHhcCC--EEEEeecCCCCCCCCCCCCcCChhhHHHHHHHHHHHHHhhhhcCCc
Q 026555 35 EPKALIFICHGYAMECSIGMNSTAIRLANEGY--ACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEKEENKEK 112 (237)
Q Consensus 35 ~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~--~v~~~d~~g~G~s~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 112 (237)
+.+.++||+||+..+.+.-....+......++ .++.+.||+.|...+-.....+......++.++++.+ ....+.+
T Consensus 16 ~~~~vlvfVHGyn~~f~~a~~r~aql~~~~~~~~~~i~FsWPS~g~~~~Y~~d~~~a~~s~~~l~~~L~~L--~~~~~~~ 93 (233)
T PF05990_consen 16 PDKEVLVFVHGYNNSFEDALRRAAQLAHDLGFPGVVILFSWPSDGSLLGYFYDRESARFSGPALARFLRDL--ARAPGIK 93 (233)
T ss_pred CCCeEEEEEeCCCCCHHHHHHHHHHHHHHhCCCceEEEEEcCCCCChhhhhhhhhhHHHHHHHHHHHHHHH--HhccCCc
Confidence 45789999999998866443344433333344 6899999988864322212123344566777888777 4444678
Q ss_pred eEEEEEeccchHHHHHHHhc----CC-----CcccEEEEcCCcccc
Q 026555 113 MRYLLGESMGGAMVLLLHRK----KP-----DYFDGAVLVAPMCKI 149 (237)
Q Consensus 113 ~~~l~G~S~Gg~~a~~~a~~----~p-----~~~~~~vl~~~~~~~ 149 (237)
+|++++||||+.+.+..... .+ ..+..+++.+|-.+.
T Consensus 94 ~I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDid~ 139 (233)
T PF05990_consen 94 RIHILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDIDN 139 (233)
T ss_pred eEEEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCCCH
Confidence 99999999999999877643 22 368899999887765
No 115
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.06 E-value=2.6e-09 Score=81.30 Aligned_cols=129 Identities=20% Similarity=0.151 Sum_probs=93.0
Q ss_pred eecCCcEEEEEEeecCCC-CCcEEEEEEcCCCCCCcCchHHHH--HHHHh-cCCEEEEeecC-C------CCCCCCCCCC
Q 026555 17 LNSRRVKLFTCSWIPQNQ-EPKALIFICHGYAMECSIGMNSTA--IRLAN-EGYACYGIDYQ-G------HGKSAGLSGY 85 (237)
Q Consensus 17 ~~~~g~~l~~~~~~~~~~-~~~~~iv~~hG~~~~~~~~~~~~~--~~l~~-~g~~v~~~d~~-g------~G~s~~~~~~ 85 (237)
...+|.+..|+.+.|... +..|.||.+||.+++...+ .... +.+++ +||-|+.+|-. + .+.+..+...
T Consensus 40 ~~~~g~~r~y~l~vP~g~~~~apLvv~LHG~~~sgag~-~~~sg~d~lAd~~gFlV~yPdg~~~~wn~~~~~~~~~p~~~ 118 (312)
T COG3509 40 FDVNGLKRSYRLYVPPGLPSGAPLVVVLHGSGGSGAGQ-LHGTGWDALADREGFLVAYPDGYDRAWNANGCGNWFGPADR 118 (312)
T ss_pred cccCCCccceEEEcCCCCCCCCCEEEEEecCCCChHHh-hcccchhhhhcccCcEEECcCccccccCCCcccccCCcccc
Confidence 456788889999998753 3458999999999887754 3322 44444 59999988532 1 1222112111
Q ss_pred cCChhhHHHHHHHHHHHHHhhhhcCCceEEEEEeccchHHHHHHHhcCCCcccEEEEcCCcc
Q 026555 86 IDNFDDLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMC 147 (237)
Q Consensus 86 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~~~~vl~~~~~ 147 (237)
.... +-+..+.++++.++.+...+..+|++.|.|-||.++..++..+|+.+.++..+++..
T Consensus 119 ~~g~-ddVgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~~faa~A~VAg~~ 179 (312)
T COG3509 119 RRGV-DDVGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYPDIFAAIAPVAGLL 179 (312)
T ss_pred cCCc-cHHHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCcccccceeeeeccc
Confidence 1122 336778888888876677777899999999999999999999999999999987766
No 116
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.06 E-value=8.7e-10 Score=86.11 Aligned_cols=122 Identities=14% Similarity=0.062 Sum_probs=94.9
Q ss_pred eecCCcEEEEEEeecCCC---CCcEEEEEEcCCCCCCcCchHHHHHHHHhc---C------CEEEEeecCCCCCCCCCCC
Q 026555 17 LNSRRVKLFTCSWIPQNQ---EPKALIFICHGYAMECSIGMNSTAIRLANE---G------YACYGIDYQGHGKSAGLSG 84 (237)
Q Consensus 17 ~~~~g~~l~~~~~~~~~~---~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~---g------~~v~~~d~~g~G~s~~~~~ 84 (237)
+...|.+||+....|+.. +.--+++++|||+++...+ -.+.+.|.+. | |.|+++.+||+|-|++...
T Consensus 129 TeIeGL~iHFlhvk~p~~k~~k~v~PlLl~HGwPGsv~EF-ykfIPlLT~p~~hg~~~d~~FEVI~PSlPGygwSd~~sk 207 (469)
T KOG2565|consen 129 TEIEGLKIHFLHVKPPQKKKKKKVKPLLLLHGWPGSVREF-YKFIPLLTDPKRHGNESDYAFEVIAPSLPGYGWSDAPSK 207 (469)
T ss_pred hhhcceeEEEEEecCCccccCCcccceEEecCCCchHHHH-HhhhhhhcCccccCCccceeEEEeccCCCCcccCcCCcc
Confidence 445799999999987632 1225899999999998877 5777777664 3 7899999999999997655
Q ss_pred CcCChhhHHHHHHHHHHHHHhhhhcCCceEEEEEeccchHHHHHHHhcCCCcccEEEEcCC
Q 026555 85 YIDNFDDLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAP 145 (237)
Q Consensus 85 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~~~~vl~~~ 145 (237)
.-.+....+.-+..++-.+ +..++++-|--+|.-|+..+|..+|++|.|+=+..+
T Consensus 208 ~GFn~~a~ArvmrkLMlRL------g~nkffiqGgDwGSiI~snlasLyPenV~GlHlnm~ 262 (469)
T KOG2565|consen 208 TGFNAAATARVMRKLMLRL------GYNKFFIQGGDWGSIIGSNLASLYPENVLGLHLNMC 262 (469)
T ss_pred CCccHHHHHHHHHHHHHHh------CcceeEeecCchHHHHHHHHHhhcchhhhHhhhccc
Confidence 4345455555555555555 889999999999999999999999999988766433
No 117
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=99.04 E-value=6.8e-09 Score=82.77 Aligned_cols=124 Identities=16% Similarity=0.210 Sum_probs=87.7
Q ss_pred CCcEEEEEEeec--CCCCCcEEEEEEcCCCCCC---cCchHHHHHHHHhcCCEEEEeecCCCCCCCCCCCCcCChhhHHH
Q 026555 20 RRVKLFTCSWIP--QNQEPKALIFICHGYAMEC---SIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDDLVD 94 (237)
Q Consensus 20 ~g~~l~~~~~~~--~~~~~~~~iv~~hG~~~~~---~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~ 94 (237)
++..+.++.|.| ......|+||++||.+-.. ...-..+...+...|+.|+.+|+|=-- . ..+...++
T Consensus 60 ~~~~~~~~~y~p~~~~~~~~p~vly~HGGg~~~g~~~~~~~~~~~~~~~~g~~vv~vdYrlaP-------e-~~~p~~~~ 131 (312)
T COG0657 60 SGDGVPVRVYRPDRKAAATAPVVLYLHGGGWVLGSLRTHDALVARLAAAAGAVVVSVDYRLAP-------E-HPFPAALE 131 (312)
T ss_pred CCCceeEEEECCCCCCCCCCcEEEEEeCCeeeecChhhhHHHHHHHHHHcCCEEEecCCCCCC-------C-CCCCchHH
Confidence 445577888888 3324579999999976322 222134445555579999999998221 1 25666788
Q ss_pred HHHHHHHHHHhhh---hcCCceEEEEEeccchHHHHHHHhcCCC----cccEEEEcCCcccccc
Q 026555 95 DCFNHFTSICEKE---ENKEKMRYLLGESMGGAMVLLLHRKKPD----YFDGAVLVAPMCKIAE 151 (237)
Q Consensus 95 d~~~~~~~~~~~~---~~~~~~~~l~G~S~Gg~~a~~~a~~~p~----~~~~~vl~~~~~~~~~ 151 (237)
|+.+++.++.+.. ..+.+++.++|+|.||.+++.++..-.+ ...+.++++|..+...
T Consensus 132 d~~~a~~~l~~~~~~~g~dp~~i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~~d~~~ 195 (312)
T COG0657 132 DAYAAYRWLRANAAELGIDPSRIAVAGDSAGGHLALALALAARDRGLPLPAAQVLISPLLDLTS 195 (312)
T ss_pred HHHHHHHHHHhhhHhhCCCccceEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEecccCCcc
Confidence 8888888885432 3457899999999999999988765432 4788999999887764
No 118
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=99.03 E-value=1.2e-09 Score=78.97 Aligned_cols=90 Identities=22% Similarity=0.254 Sum_probs=64.1
Q ss_pred EEEEcCCCCCCc-CchHHHHHHHHhcCCEEEEeecCCCCCCCCCCCCcCChhhHHHHHHHHHHHHHhhhhcCCceEEEEE
Q 026555 40 IFICHGYAMECS-IGMNSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEKEENKEKMRYLLG 118 (237)
Q Consensus 40 iv~~hG~~~~~~-~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~G 118 (237)
|+++||++++.. .|+..+.+.+... ++|-.+++ ...+.+.+...+.+.+..+ .++++++|
T Consensus 1 v~IvhG~~~s~~~HW~~wl~~~l~~~-~~V~~~~~-----------~~P~~~~W~~~l~~~i~~~-------~~~~ilVa 61 (171)
T PF06821_consen 1 VLIVHGYGGSPPDHWQPWLERQLENS-VRVEQPDW-----------DNPDLDEWVQALDQAIDAI-------DEPTILVA 61 (171)
T ss_dssp EEEE--TTSSTTTSTHHHHHHHHTTS-EEEEEC-------------TS--HHHHHHHHHHCCHC--------TTTEEEEE
T ss_pred CEEeCCCCCCCccHHHHHHHHhCCCC-eEEecccc-----------CCCCHHHHHHHHHHHHhhc-------CCCeEEEE
Confidence 689999987755 4767788888776 77777666 1136677776666666544 45799999
Q ss_pred eccchHHHHHHH-hcCCCcccEEEEcCCccc
Q 026555 119 ESMGGAMVLLLH-RKKPDYFDGAVLVAPMCK 148 (237)
Q Consensus 119 ~S~Gg~~a~~~a-~~~p~~~~~~vl~~~~~~ 148 (237)
||+|+..++.++ .....+|++++|++|...
T Consensus 62 HSLGc~~~l~~l~~~~~~~v~g~lLVAp~~~ 92 (171)
T PF06821_consen 62 HSLGCLTALRWLAEQSQKKVAGALLVAPFDP 92 (171)
T ss_dssp ETHHHHHHHHHHHHTCCSSEEEEEEES--SC
T ss_pred eCHHHHHHHHHHhhcccccccEEEEEcCCCc
Confidence 999999999999 778889999999998864
No 119
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=99.00 E-value=1.3e-08 Score=79.24 Aligned_cols=115 Identities=23% Similarity=0.289 Sum_probs=85.2
Q ss_pred eeEeecCCcEEEEEEee-cCCCCCcEEEEEEcCCCCCCcCc-h-----HHHHHHHHhcCCEEEEeecCCCCCCCCCCCCc
Q 026555 14 EFILNSRRVKLFTCSWI-PQNQEPKALIFICHGYAMECSIG-M-----NSTAIRLANEGYACYGIDYQGHGKSAGLSGYI 86 (237)
Q Consensus 14 ~~~~~~~g~~l~~~~~~-~~~~~~~~~iv~~hG~~~~~~~~-~-----~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~ 86 (237)
...+..|+..|-..... |.. ++...||++-|.++..+.. + ..+.+...+.|.+|+.+++||.|.|.+..
T Consensus 114 Rv~Iq~D~~~IDt~~I~~~~a-~~~RWiL~s~GNg~~~E~~~~~~~~~~~~~~~ak~~~aNvl~fNYpGVg~S~G~~--- 189 (365)
T PF05677_consen 114 RVPIQYDGVKIDTMAIHQPEA-KPQRWILVSNGNGECYENRAMLDYKDDWIQRFAKELGANVLVFNYPGVGSSTGPP--- 189 (365)
T ss_pred eEEEeeCCEEEEEEEeeCCCC-CCCcEEEEEcCChHHhhhhhhhccccHHHHHHHHHcCCcEEEECCCccccCCCCC---
Confidence 34455588877766654 333 5667899999988776641 0 23444444458999999999999998763
Q ss_pred CChhhHHHHHHHHHHHHHhhhh-cCCceEEEEEeccchHHHHHHHhcC
Q 026555 87 DNFDDLVDDCFNHFTSICEKEE-NKEKMRYLLGESMGGAMVLLLHRKK 133 (237)
Q Consensus 87 ~~~~~~~~d~~~~~~~~~~~~~-~~~~~~~l~G~S~Gg~~a~~~a~~~ 133 (237)
+.++++.|-.+.++++.++.+ ...+++++.|||+||.++.+.+.++
T Consensus 190 -s~~dLv~~~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~~~ 236 (365)
T PF05677_consen 190 -SRKDLVKDYQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAEALKKE 236 (365)
T ss_pred -CHHHHHHHHHHHHHHHHhcccCCChheEEEeeccccHHHHHHHHHhc
Confidence 568999999999999954333 3558999999999999999876654
No 120
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=99.00 E-value=3.4e-09 Score=81.08 Aligned_cols=113 Identities=19% Similarity=0.160 Sum_probs=76.7
Q ss_pred CcEEEEEEcCCCCCCcCchHHHHHHHH-hcCC--EEE--EeecCCC----CCCCCC----------CCCc-CChhhHHHH
Q 026555 36 PKALIFICHGYAMECSIGMNSTAIRLA-NEGY--ACY--GIDYQGH----GKSAGL----------SGYI-DNFDDLVDD 95 (237)
Q Consensus 36 ~~~~iv~~hG~~~~~~~~~~~~~~~l~-~~g~--~v~--~~d~~g~----G~s~~~----------~~~~-~~~~~~~~d 95 (237)
...+.||+||++++...+ ..+...+. +.|. .++ .++.-|+ |.=... .... .++...+..
T Consensus 10 ~~tPTifihG~~gt~~s~-~~mi~~~~~~~~~~~~~l~v~V~~~G~v~~~G~~~~~~~nPiIqV~F~~n~~~~~~~qa~w 88 (255)
T PF06028_consen 10 STTPTIFIHGYGGTANSF-NHMINRLENKQGVAQKVLTVTVSKNGKVKVSGKLSKNAKNPIIQVNFEDNRNANYKKQAKW 88 (255)
T ss_dssp S-EEEEEE--TTGGCCCC-HHHHHHHHHCSTS-S-EEEEEEETTSEEEEES---TT-SS-EEEEEESSTT-CHHHHHHHH
T ss_pred CCCcEEEECCCCCChhHH-HHHHHHHHhhcCCCceEEEEEECCCCeEEEeeecCCCCCCCEEEEEecCCCcCCHHHHHHH
Confidence 356799999999999988 99999997 6653 343 3444443 221110 1111 356778899
Q ss_pred HHHHHHHHHhhhhcCCceEEEEEeccchHHHHHHHhcCCC-----cccEEEEcCCcccccc
Q 026555 96 CFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPD-----YFDGAVLVAPMCKIAE 151 (237)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~-----~~~~~vl~~~~~~~~~ 151 (237)
+..++..+ +++...+++.++||||||..++.|+..+.+ .+.++|.++++.....
T Consensus 89 l~~vl~~L--~~~Y~~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfng~~ 147 (255)
T PF06028_consen 89 LKKVLKYL--KKKYHFKKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFNGIL 147 (255)
T ss_dssp HHHHHHHH--HHCC--SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TTTTT
T ss_pred HHHHHHHH--HHhcCCCEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccCccc
Confidence 99999999 778889999999999999999999887532 4899999988876653
No 121
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=98.99 E-value=4.5e-09 Score=81.47 Aligned_cols=132 Identities=20% Similarity=0.157 Sum_probs=89.6
Q ss_pred ccceeEeecCCcEEEEEEe--ecCC-CCCcEEEEEEcCCCCCCcCchHHHHHHHHhcCCEEEEeecCCCCCCCCCCCCcC
Q 026555 11 YDEEFILNSRRVKLFTCSW--IPQN-QEPKALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSGYID 87 (237)
Q Consensus 11 ~~~~~~~~~~g~~l~~~~~--~~~~-~~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~ 87 (237)
...-.+.+.||.+|-.... .|.+ ++.+..|+.+.|-.+.-+. .++..=.+.||.|+.+++||++.|.+.....
T Consensus 214 G~R~kiks~dgneiDtmF~d~r~n~~~ngq~LvIC~EGNAGFYEv---G~m~tP~~lgYsvLGwNhPGFagSTG~P~p~- 289 (517)
T KOG1553|consen 214 GQRLKIKSSDGNEIDTMFLDGRPNQSGNGQDLVICFEGNAGFYEV---GVMNTPAQLGYSVLGWNHPGFAGSTGLPYPV- 289 (517)
T ss_pred CeEEEEeecCCcchhheeecCCCCCCCCCceEEEEecCCccceEe---eeecChHHhCceeeccCCCCccccCCCCCcc-
Confidence 3445566777766554333 1222 2345677777887665442 2333334568999999999999998765432
Q ss_pred ChhhHHHHHHHHHHHHHhhhhcCCceEEEEEeccchHHHHHHHhcCCCcccEEEEcCCccccc
Q 026555 88 NFDDLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKIA 150 (237)
Q Consensus 88 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~~~~vl~~~~~~~~ 150 (237)
+-.+.+.+++.+..+.-....+.+++.|||.||.-++.+|..+|+ |+++|+-++.-+.-
T Consensus 290 ---n~~nA~DaVvQfAI~~Lgf~~edIilygWSIGGF~~~waAs~YPd-VkavvLDAtFDDll 348 (517)
T KOG1553|consen 290 ---NTLNAADAVVQFAIQVLGFRQEDIILYGWSIGGFPVAWAASNYPD-VKAVVLDATFDDLL 348 (517)
T ss_pred ---cchHHHHHHHHHHHHHcCCCccceEEEEeecCCchHHHHhhcCCC-ceEEEeecchhhhh
Confidence 223344455555544445567899999999999999999999998 99999988876654
No 122
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=98.99 E-value=4.1e-09 Score=92.75 Aligned_cols=92 Identities=11% Similarity=0.056 Sum_probs=74.3
Q ss_pred HHHHHHHhcCCEEEEeecCCCCCCCCCCCCcCChhhHHHHHHHHHHHHHhh--------------hhcCCceEEEEEecc
Q 026555 56 STAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEK--------------EENKEKMRYLLGESM 121 (237)
Q Consensus 56 ~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~d~~~~~~~~~~~--------------~~~~~~~~~l~G~S~ 121 (237)
.+.+.|.++||.|+..|.||+|.|.+.... .. .+-.+|..++|+++..+ +.....+|.++|.|+
T Consensus 270 ~~~~~~~~rGYaVV~~D~RGtg~SeG~~~~-~~-~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY 347 (767)
T PRK05371 270 SLNDYFLPRGFAVVYVSGIGTRGSDGCPTT-GD-YQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSY 347 (767)
T ss_pred hHHHHHHhCCeEEEEEcCCCCCCCCCcCcc-CC-HHHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEcH
Confidence 456889999999999999999999986432 12 44577999999999521 122357999999999
Q ss_pred chHHHHHHHhcCCCcccEEEEcCCcccc
Q 026555 122 GGAMVLLLHRKKPDYFDGAVLVAPMCKI 149 (237)
Q Consensus 122 Gg~~a~~~a~~~p~~~~~~vl~~~~~~~ 149 (237)
||.+++.+|...|+.++++|.+++....
T Consensus 348 ~G~~~~~aAa~~pp~LkAIVp~a~is~~ 375 (767)
T PRK05371 348 LGTLPNAVATTGVEGLETIIPEAAISSW 375 (767)
T ss_pred HHHHHHHHHhhCCCcceEEEeeCCCCcH
Confidence 9999999999999899999998877654
No 123
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=98.97 E-value=6.7e-09 Score=75.88 Aligned_cols=90 Identities=18% Similarity=0.211 Sum_probs=65.5
Q ss_pred EEEEcCCCCCCcCch-HHHHHHHHhcC--CEEEEeecCCCCCCCCCCCCcCChhhHHHHHHHHHHHHHhhhhcCCceEEE
Q 026555 40 IFICHGYAMECSIGM-NSTAIRLANEG--YACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEKEENKEKMRYL 116 (237)
Q Consensus 40 iv~~hG~~~~~~~~~-~~~~~~l~~~g--~~v~~~d~~g~G~s~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l 116 (237)
|+++||+.++....- ..+.+.+.+.+ ..+.++|++ ......++.+.++++.. ..+.+.+
T Consensus 2 ilYlHGF~Ssp~S~Ka~~l~~~~~~~~~~~~~~~p~l~------------~~p~~a~~~l~~~i~~~------~~~~~~l 63 (187)
T PF05728_consen 2 ILYLHGFNSSPQSFKAQALKQYFAEHGPDIQYPCPDLP------------PFPEEAIAQLEQLIEEL------KPENVVL 63 (187)
T ss_pred eEEecCCCCCCCCHHHHHHHHHHHHhCCCceEECCCCC------------cCHHHHHHHHHHHHHhC------CCCCeEE
Confidence 899999999887552 23455666654 355666664 34566667777777666 5556999
Q ss_pred EEeccchHHHHHHHhcCCCcccEEEEcCCccccc
Q 026555 117 LGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKIA 150 (237)
Q Consensus 117 ~G~S~Gg~~a~~~a~~~p~~~~~~vl~~~~~~~~ 150 (237)
+|.||||..|..++.+++ +++ |+++|.....
T Consensus 64 iGSSlGG~~A~~La~~~~--~~a-vLiNPav~p~ 94 (187)
T PF05728_consen 64 IGSSLGGFYATYLAERYG--LPA-VLINPAVRPY 94 (187)
T ss_pred EEEChHHHHHHHHHHHhC--CCE-EEEcCCCCHH
Confidence 999999999999999885 334 8889887764
No 124
>COG4099 Predicted peptidase [General function prediction only]
Probab=98.97 E-value=2.2e-08 Score=76.23 Aligned_cols=128 Identities=16% Similarity=0.119 Sum_probs=80.2
Q ss_pred EeecCCcEEEEEEeecCC---CCCc-EEEEEEcCCCCCCcCchHHHHHHHHhcCCEEEEeecCCCC---CCCCCCC----
Q 026555 16 ILNSRRVKLFTCSWIPQN---QEPK-ALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHG---KSAGLSG---- 84 (237)
Q Consensus 16 ~~~~~g~~l~~~~~~~~~---~~~~-~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G---~s~~~~~---- 84 (237)
+...-|.++.|+.|.|.. ++.. |.+||+||.|..+..- ....... --.++++.+-.+ .++....
T Consensus 166 ~d~~tgneLkYrly~Pkdy~pdkky~PLvlfLHgagq~g~dn---~~~l~sg--~gaiawa~pedqcfVlAPQy~~if~d 240 (387)
T COG4099 166 YDESTGNELKYRLYTPKDYAPDKKYYPLVLFLHGAGQGGSDN---DKVLSSG--IGAIAWAGPEDQCFVLAPQYNPIFAD 240 (387)
T ss_pred eccccCceeeEEEecccccCCCCccccEEEEEecCCCCCchh---hhhhhcC--ccceeeecccCceEEEcccccccccc
Confidence 344678999999999953 2333 9999999988766522 2222222 223333333332 1111000
Q ss_pred CcCChhhHHHHHHHHHH-HHHhhhhcCCceEEEEEeccchHHHHHHHhcCCCcccEEEEcCCccc
Q 026555 85 YIDNFDDLVDDCFNHFT-SICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCK 148 (237)
Q Consensus 85 ~~~~~~~~~~d~~~~~~-~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~~~~vl~~~~~~ 148 (237)
.............++++ .+.+..+.+..+++++|.|+||+-++.++.++|+.+++.+++++..+
T Consensus 241 ~e~~t~~~l~~~idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~kfPdfFAaa~~iaG~~d 305 (387)
T COG4099 241 SEEKTLLYLIEKIDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKFPDFFAAAVPIAGGGD 305 (387)
T ss_pred cccccchhHHHHHHHHHHHHhhccCcccceEEEEeecCcchhhHHHHHhCchhhheeeeecCCCc
Confidence 00011223333344444 45445566778999999999999999999999999999999987655
No 125
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=98.96 E-value=7.1e-09 Score=74.65 Aligned_cols=103 Identities=18% Similarity=0.181 Sum_probs=85.1
Q ss_pred EEEEEcCCCCCCcCchHHHHHHHHhcCCEEEEeecCCCCCCCCCCCCcCChhhHHHHHHHHHHHHHhhhhcCCceEEEEE
Q 026555 39 LIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEKEENKEKMRYLLG 118 (237)
Q Consensus 39 ~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~G 118 (237)
.+|++-|=++-...- ..+++.|+++|+.|+.+|-+-+--+. .+.++.+.|+.++++.. .++.+.++++|+|
T Consensus 4 ~~v~~SGDgGw~~~d-~~~a~~l~~~G~~VvGvdsl~Yfw~~------rtP~~~a~Dl~~~i~~y--~~~w~~~~vvLiG 74 (192)
T PF06057_consen 4 LAVFFSGDGGWRDLD-KQIAEALAKQGVPVVGVDSLRYFWSE------RTPEQTAADLARIIRHY--RARWGRKRVVLIG 74 (192)
T ss_pred EEEEEeCCCCchhhh-HHHHHHHHHCCCeEEEechHHHHhhh------CCHHHHHHHHHHHHHHH--HHHhCCceEEEEe
Confidence 577888877766655 68999999999999999987665543 46788999999999999 7777889999999
Q ss_pred eccchHHHHHHHhcCC----CcccEEEEcCCccccc
Q 026555 119 ESMGGAMVLLLHRKKP----DYFDGAVLVAPMCKIA 150 (237)
Q Consensus 119 ~S~Gg~~a~~~a~~~p----~~~~~~vl~~~~~~~~ 150 (237)
+|+|+-+.-....+.| ++|+.++|+++.....
T Consensus 75 YSFGADvlP~~~nrLp~~~r~~v~~v~Ll~p~~~~d 110 (192)
T PF06057_consen 75 YSFGADVLPFIYNRLPAALRARVAQVVLLSPSTTAD 110 (192)
T ss_pred ecCCchhHHHHHhhCCHHHHhheeEEEEeccCCcce
Confidence 9999988887777766 4699999998776543
No 126
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=98.95 E-value=1e-08 Score=83.17 Aligned_cols=106 Identities=12% Similarity=0.050 Sum_probs=85.5
Q ss_pred cEEEEEEcCCCCCCcCchHHHHHHHHhcCCEEEEeecCCCCCCCCCCCCcCChhhHHHHHHHHHHHHHhhhhcCCceEEE
Q 026555 37 KALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEKEENKEKMRYL 116 (237)
Q Consensus 37 ~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l 116 (237)
+|+||++..+.++.....+++.+.|.+ |+.|+..|+..-+..+..... .+++++++-+.++++.+ +.+ +++
T Consensus 102 ~~pvLiV~Pl~g~~~~L~RS~V~~Ll~-g~dVYl~DW~~p~~vp~~~~~-f~ldDYi~~l~~~i~~~------G~~-v~l 172 (406)
T TIGR01849 102 GPAVLIVAPMSGHYATLLRSTVEALLP-DHDVYITDWVNARMVPLSAGK-FDLEDYIDYLIEFIRFL------GPD-IHV 172 (406)
T ss_pred CCcEEEEcCCchHHHHHHHHHHHHHhC-CCcEEEEeCCCCCCCchhcCC-CCHHHHHHHHHHHHHHh------CCC-CcE
Confidence 378999999988777666899999999 999999999877755322222 58899998888999887 555 999
Q ss_pred EEeccchHHHHHHHhc-----CCCcccEEEEcCCcccccc
Q 026555 117 LGESMGGAMVLLLHRK-----KPDYFDGAVLVAPMCKIAE 151 (237)
Q Consensus 117 ~G~S~Gg~~a~~~a~~-----~p~~~~~~vl~~~~~~~~~ 151 (237)
+|+|+||..++.+++. .|+.++.+++++++.++..
T Consensus 173 ~GvCqgG~~~laa~Al~a~~~~p~~~~sltlm~~PID~~~ 212 (406)
T TIGR01849 173 IAVCQPAVPVLAAVALMAENEPPAQPRSMTLMGGPIDARA 212 (406)
T ss_pred EEEchhhHHHHHHHHHHHhcCCCCCcceEEEEecCccCCC
Confidence 9999999987655543 3677999999999998764
No 127
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=98.91 E-value=8.9e-09 Score=83.68 Aligned_cols=113 Identities=19% Similarity=0.217 Sum_probs=66.3
Q ss_pred CCcEEEEEEcCCCCCCcCchHHHHHHHHhcCCEEEEeecCCCCCC------CCC---CC---------------Cc---C
Q 026555 35 EPKALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKS------AGL---SG---------------YI---D 87 (237)
Q Consensus 35 ~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s------~~~---~~---------------~~---~ 87 (237)
+..|+|||.||++++...| ..++..|+.+||-|+++|+|..-.+ +.. .. .. .
T Consensus 98 ~~~PvvIFSHGlgg~R~~y-S~~~~eLAS~GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (379)
T PF03403_consen 98 GKFPVVIFSHGLGGSRTSY-SAICGELASHGYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRDFDPEE 176 (379)
T ss_dssp S-EEEEEEE--TT--TTTT-HHHHHHHHHTT-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE-----GGG
T ss_pred CCCCEEEEeCCCCcchhhH-HHHHHHHHhCCeEEEEeccCCCceeEEEeccCCCccccccccccccccceeccccccchh
Confidence 4579999999999999988 9999999999999999999954211 000 00 00 0
Q ss_pred -------ChhhHHHHHHHHHHHHHhhh--------------------hcCCceEEEEEeccchHHHHHHHhcCCCcccEE
Q 026555 88 -------NFDDLVDDCFNHFTSICEKE--------------------ENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGA 140 (237)
Q Consensus 88 -------~~~~~~~d~~~~~~~~~~~~--------------------~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~~~~ 140 (237)
.++..+.|+..+++.+.... ..+..++.++|||+||..++..+.+. .+++..
T Consensus 177 ~~~~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGGATa~~~l~~d-~r~~~~ 255 (379)
T PF03403_consen 177 EFELRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGGATALQALRQD-TRFKAG 255 (379)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHHHHHHHHHHH--TT--EE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCchHHHHHHHHhhc-cCcceE
Confidence 01122556666666663211 11245799999999999999888776 568888
Q ss_pred EEcCCcccc
Q 026555 141 VLVAPMCKI 149 (237)
Q Consensus 141 vl~~~~~~~ 149 (237)
|++.+....
T Consensus 256 I~LD~W~~P 264 (379)
T PF03403_consen 256 ILLDPWMFP 264 (379)
T ss_dssp EEES---TT
T ss_pred EEeCCcccC
Confidence 888877553
No 128
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=98.90 E-value=8e-09 Score=97.02 Aligned_cols=100 Identities=14% Similarity=0.129 Sum_probs=82.2
Q ss_pred cEEEEEEcCCCCCCcCchHHHHHHHHhcCCEEEEeecCCCCCCCCCCCCcCChhhHHHHHHHHHHHHHhhhhcCCceEEE
Q 026555 37 KALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEKEENKEKMRYL 116 (237)
Q Consensus 37 ~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l 116 (237)
.++++++||++++...| ..+.+.|.. +++|+.++.+|++.+.. ..++++++++++.+.++.+ . ...++++
T Consensus 1068 ~~~l~~lh~~~g~~~~~-~~l~~~l~~-~~~v~~~~~~g~~~~~~---~~~~l~~la~~~~~~i~~~--~---~~~p~~l 1137 (1296)
T PRK10252 1068 GPTLFCFHPASGFAWQF-SVLSRYLDP-QWSIYGIQSPRPDGPMQ---TATSLDEVCEAHLATLLEQ--Q---PHGPYHL 1137 (1296)
T ss_pred CCCeEEecCCCCchHHH-HHHHHhcCC-CCcEEEEECCCCCCCCC---CCCCHHHHHHHHHHHHHhh--C---CCCCEEE
Confidence 46799999999998877 899988865 49999999999986532 2258899999998888765 1 2458999
Q ss_pred EEeccchHHHHHHHhc---CCCcccEEEEcCCc
Q 026555 117 LGESMGGAMVLLLHRK---KPDYFDGAVLVAPM 146 (237)
Q Consensus 117 ~G~S~Gg~~a~~~a~~---~p~~~~~~vl~~~~ 146 (237)
+|||+||.++..+|.+ .++.+..++++++.
T Consensus 1138 ~G~S~Gg~vA~e~A~~l~~~~~~v~~l~l~~~~ 1170 (1296)
T PRK10252 1138 LGYSLGGTLAQGIAARLRARGEEVAFLGLLDTW 1170 (1296)
T ss_pred EEechhhHHHHHHHHHHHHcCCceeEEEEecCC
Confidence 9999999999999885 57889999998764
No 129
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=98.89 E-value=3.1e-08 Score=79.13 Aligned_cols=117 Identities=15% Similarity=0.236 Sum_probs=90.6
Q ss_pred eecCCCC-CcEEEEEEcCCCCCCcCc----hHHHHHHHHhcCCEEEEeecCCCCCCCCCCCCcCChhhHH-HHHHHHHHH
Q 026555 29 WIPQNQE-PKALIFICHGYAMECSIG----MNSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDDLV-DDCFNHFTS 102 (237)
Q Consensus 29 ~~~~~~~-~~~~iv~~hG~~~~~~~~----~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~-~d~~~~~~~ 102 (237)
|.|..++ -+++++++|.+-..-.++ -.++...+.+.|+.|+.+++++-..+... .++++++ +.+.+.++.
T Consensus 98 y~p~~e~v~~~PlLiVpP~iNk~yi~Dl~~~~s~V~~l~~~g~~vfvIsw~nPd~~~~~----~~~edYi~e~l~~aid~ 173 (445)
T COG3243 98 YKPLTEKVLKRPLLIVPPWINKFYILDLSPEKSLVRWLLEQGLDVFVISWRNPDASLAA----KNLEDYILEGLSEAIDT 173 (445)
T ss_pred cCCCCCccCCCceEeeccccCceeEEeCCCCccHHHHHHHcCCceEEEeccCchHhhhh----ccHHHHHHHHHHHHHHH
Confidence 3354333 356899999875443321 16788999999999999999877666542 4778888 788888888
Q ss_pred HHhhhhcCCceEEEEEeccchHHHHHHHhcCCCc-ccEEEEcCCcccccc
Q 026555 103 ICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDY-FDGAVLVAPMCKIAE 151 (237)
Q Consensus 103 ~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~-~~~~vl~~~~~~~~~ 151 (237)
+ +...+.+++.++|||+||.++..+++.++.+ |+.++++.+..++..
T Consensus 174 v--~~itg~~~InliGyCvGGtl~~~ala~~~~k~I~S~T~lts~~DF~~ 221 (445)
T COG3243 174 V--KDITGQKDINLIGYCVGGTLLAAALALMAAKRIKSLTLLTSPVDFSH 221 (445)
T ss_pred H--HHHhCccccceeeEecchHHHHHHHHhhhhcccccceeeecchhhcc
Confidence 8 4454678999999999999999998888877 999999988888765
No 130
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.86 E-value=2.4e-08 Score=76.31 Aligned_cols=101 Identities=19% Similarity=0.216 Sum_probs=82.1
Q ss_pred EEEEEEcCCCCCCcCchHHHHHHHHhcCCEEEEeecCCCCCCCCCCCCcCChhhHHHHHHHHHHHHHhhhhcCCceEEEE
Q 026555 38 ALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEKEENKEKMRYLL 117 (237)
Q Consensus 38 ~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~ 117 (237)
|+++++|+.+++...| ..++..|... ..|+..+.+|.+..... ..+++++++...+.|+.+ .+..+++++
T Consensus 1 ~pLF~fhp~~G~~~~~-~~L~~~l~~~-~~v~~l~a~g~~~~~~~---~~~l~~~a~~yv~~Ir~~-----QP~GPy~L~ 70 (257)
T COG3319 1 PPLFCFHPAGGSVLAY-APLAAALGPL-LPVYGLQAPGYGAGEQP---FASLDDMAAAYVAAIRRV-----QPEGPYVLL 70 (257)
T ss_pred CCEEEEcCCCCcHHHH-HHHHHHhccC-ceeeccccCcccccccc---cCCHHHHHHHHHHHHHHh-----CCCCCEEEE
Confidence 4699999999998877 8999999887 99999999999853211 247788877777777655 356799999
Q ss_pred EeccchHHHHHHHhc---CCCcccEEEEcCCccc
Q 026555 118 GESMGGAMVLLLHRK---KPDYFDGAVLVAPMCK 148 (237)
Q Consensus 118 G~S~Gg~~a~~~a~~---~p~~~~~~vl~~~~~~ 148 (237)
|||+||.+|...|.+ ..+.|..++++.+...
T Consensus 71 G~S~GG~vA~evA~qL~~~G~~Va~L~llD~~~~ 104 (257)
T COG3319 71 GWSLGGAVAFEVAAQLEAQGEEVAFLGLLDAVPP 104 (257)
T ss_pred eeccccHHHHHHHHHHHhCCCeEEEEEEeccCCC
Confidence 999999999999875 3457999999987776
No 131
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=98.84 E-value=1.5e-07 Score=74.70 Aligned_cols=135 Identities=16% Similarity=0.196 Sum_probs=90.7
Q ss_pred eEeecCCcEEEEEEeecCCC---CCcEEEEEEcCCCCC-----CcCchHHHHHHHHh-cCCEEEEeecCCCCCCCCCCCC
Q 026555 15 FILNSRRVKLFTCSWIPQNQ---EPKALIFICHGYAME-----CSIGMNSTAIRLAN-EGYACYGIDYQGHGKSAGLSGY 85 (237)
Q Consensus 15 ~~~~~~g~~l~~~~~~~~~~---~~~~~iv~~hG~~~~-----~~~~~~~~~~~l~~-~g~~v~~~d~~g~G~s~~~~~~ 85 (237)
.+.......+..+.|.|... +..|.||++||.|-- ...| ..+...+++ .+..|+++|+| .++... .
T Consensus 65 dv~~~~~~~l~vRly~P~~~~~~~~~p~lvyfHGGGf~~~S~~~~~y-~~~~~~~a~~~~~vvvSVdYR---LAPEh~-~ 139 (336)
T KOG1515|consen 65 DVTIDPFTNLPVRLYRPTSSSSETKLPVLVYFHGGGFCLGSANSPAY-DSFCTRLAAELNCVVVSVDYR---LAPEHP-F 139 (336)
T ss_pred eeEecCCCCeEEEEEcCCCCCcccCceEEEEEeCCccEeCCCCCchh-HHHHHHHHHHcCeEEEecCcc---cCCCCC-C
Confidence 34455567889999988753 356999999997622 2334 677777744 48889999998 222111 1
Q ss_pred cCChhhHHHHHHHHHHHHHhhhhcCCceEEEEEeccchHHHHHHHhcC------CCcccEEEEcCCccccccccC
Q 026555 86 IDNFDDLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKK------PDYFDGAVLVAPMCKIAENVK 154 (237)
Q Consensus 86 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~------p~~~~~~vl~~~~~~~~~~~~ 154 (237)
...++|..+.+.-+.+........+.+++++.|-|.||++|..++.+. +..+++.|++-|.........
T Consensus 140 Pa~y~D~~~Al~w~~~~~~~~~~~D~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~~~~~~~ 214 (336)
T KOG1515|consen 140 PAAYDDGWAALKWVLKNSWLKLGADPSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQGTDRTE 214 (336)
T ss_pred CccchHHHHHHHHHHHhHHHHhCCCcccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccCCCCCCC
Confidence 134455555555444431114456788999999999999998877542 456999999999887765433
No 132
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=98.81 E-value=6.3e-08 Score=75.98 Aligned_cols=114 Identities=18% Similarity=0.225 Sum_probs=82.4
Q ss_pred CCcEEEEEEcCCCCCCcCchHHHHHHHHhcCC--EEEEeecCCCCCCCCCCCCcCChhhHHHHHHHHHHHHHhhhhcCCc
Q 026555 35 EPKALIFICHGYAMECSIGMNSTAIRLANEGY--ACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEKEENKEK 112 (237)
Q Consensus 35 ~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~--~v~~~d~~g~G~s~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 112 (237)
..+.++||+||+..+-..-...+++.....|+ ..+.+-||..|.--+-..+..+-+.-..+++.+++.+ ......+
T Consensus 114 ~~k~vlvFvHGfNntf~dav~R~aqI~~d~g~~~~pVvFSWPS~g~l~~Yn~DreS~~~Sr~aLe~~lr~L--a~~~~~~ 191 (377)
T COG4782 114 SAKTVLVFVHGFNNTFEDAVYRTAQIVHDSGNDGVPVVFSWPSRGSLLGYNYDRESTNYSRPALERLLRYL--ATDKPVK 191 (377)
T ss_pred CCCeEEEEEcccCCchhHHHHHHHHHHhhcCCCcceEEEEcCCCCeeeecccchhhhhhhHHHHHHHHHHH--HhCCCCc
Confidence 45789999999998766443455566655554 5678899988865433322234455577899999998 4555678
Q ss_pred eEEEEEeccchHHHHHHHhc--------CCCcccEEEEcCCccccc
Q 026555 113 MRYLLGESMGGAMVLLLHRK--------KPDYFDGAVLVAPMCKIA 150 (237)
Q Consensus 113 ~~~l~G~S~Gg~~a~~~a~~--------~p~~~~~~vl~~~~~~~~ 150 (237)
++++++||||.+++++...+ .+..++-+|+.+|-.+..
T Consensus 192 ~I~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPDiD~D 237 (377)
T COG4782 192 RIYLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPDIDVD 237 (377)
T ss_pred eEEEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCCCChh
Confidence 99999999999999877654 234688899998877653
No 133
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=98.79 E-value=3.6e-08 Score=76.07 Aligned_cols=126 Identities=17% Similarity=0.215 Sum_probs=73.6
Q ss_pred CcEEEEEEeecCC---CCCcEEEEEEcCCCCCCcCc-hHHHHHHHHhcC----CEEEEeecCCCCCCCC--C--------
Q 026555 21 RVKLFTCSWIPQN---QEPKALIFICHGYAMECSIG-MNSTAIRLANEG----YACYGIDYQGHGKSAG--L-------- 82 (237)
Q Consensus 21 g~~l~~~~~~~~~---~~~~~~iv~~hG~~~~~~~~-~~~~~~~l~~~g----~~v~~~d~~g~G~s~~--~-------- 82 (237)
|....+..+.|.+ .++-|+|+++||.......+ .......+.+.| ..+++++..+.+.... .
T Consensus 5 g~~~~~~VylP~~y~~~~~~PvlylldG~~~~~~~~~~~~~~~~~~~~~~~~~~iiV~i~~~~~~~~~~~~~~~~~~~~~ 84 (251)
T PF00756_consen 5 GRDRRVWVYLPPGYDPSKPYPVLYLLDGQSGWFRNGNAQEALDRLIAEGKIPPMIIVVIPNGDNSRFYTSWYLPAGSSRR 84 (251)
T ss_dssp TEEEEEEEEECTTGGTTTTEEEEEEESHTTHHHHHHHHHHHHHHHHHHHTSEEEEEEEEESSSTSSTTSBTTSSBCTTCB
T ss_pred CCeEEEEEEECCCCCCCCCCEEEEEccCCccccccchHHHHHHHHHHhCCCCceEEEEEecccccccccccccccccccc
Confidence 5667788888876 35679999999972211111 122333333432 3455666555441110 0
Q ss_pred CCCcC---Ch-hhHHHHHHHHHHHHHhhhhcCCceEEEEEeccchHHHHHHHhcCCCcccEEEEcCCcccc
Q 026555 83 SGYID---NF-DDLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKI 149 (237)
Q Consensus 83 ~~~~~---~~-~~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~~~~vl~~~~~~~ 149 (237)
..... .+ +-+.+++..+|+.- ......+..++|+||||..|+.++.++|+.+.+++.+||....
T Consensus 85 ~~~~~~~~~~~~~l~~el~p~i~~~---~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~F~~~~~~S~~~~~ 152 (251)
T PF00756_consen 85 ADDSGGGDAYETFLTEELIPYIEAN---YRTDPDRRAIAGHSMGGYGALYLALRHPDLFGAVIAFSGALDP 152 (251)
T ss_dssp CTSTTTHHHHHHHHHTHHHHHHHHH---SSEEECCEEEEEETHHHHHHHHHHHHSTTTESEEEEESEESET
T ss_pred cccCCCCcccceehhccchhHHHHh---cccccceeEEeccCCCcHHHHHHHHhCccccccccccCccccc
Confidence 00001 11 12233444444433 1112223899999999999999999999999999999977443
No 134
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=98.78 E-value=2.5e-07 Score=64.28 Aligned_cols=111 Identities=16% Similarity=0.175 Sum_probs=75.5
Q ss_pred CCcEEEEEEcCCCCCCcC-chHHHHHHHHhcCCEEEEeecCCCCCCC-----CCCCCcCChhhHHHHHHHHHHHHHhhhh
Q 026555 35 EPKALIFICHGYAMECSI-GMNSTAIRLANEGYACYGIDYQGHGKSA-----GLSGYIDNFDDLVDDCFNHFTSICEKEE 108 (237)
Q Consensus 35 ~~~~~iv~~hG~~~~~~~-~~~~~~~~l~~~g~~v~~~d~~g~G~s~-----~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 108 (237)
.+..+||+-||-|.+.+. ++..++..|+..|+.|..++++-.-.-. .+...-.-...++..+.+ + +..
T Consensus 12 ~~~~tilLaHGAGasmdSt~m~~~a~~la~~G~~vaRfefpYma~Rrtg~rkPp~~~~t~~~~~~~~~aq----l--~~~ 85 (213)
T COG3571 12 PAPVTILLAHGAGASMDSTSMTAVAAALARRGWLVARFEFPYMAARRTGRRKPPPGSGTLNPEYIVAIAQ----L--RAG 85 (213)
T ss_pred CCCEEEEEecCCCCCCCCHHHHHHHHHHHhCceeEEEeecchhhhccccCCCCcCccccCCHHHHHHHHH----H--Hhc
Confidence 556789999999987764 3467888999999999999987542111 111110112223333333 3 333
Q ss_pred cCCceEEEEEeccchHHHHHHHhcCCCcccEEEEcCCcccccc
Q 026555 109 NKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKIAE 151 (237)
Q Consensus 109 ~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~~~~vl~~~~~~~~~ 151 (237)
....+.++-|+||||.++.+++..-.-.|+++++++-++....
T Consensus 86 l~~gpLi~GGkSmGGR~aSmvade~~A~i~~L~clgYPfhppG 128 (213)
T COG3571 86 LAEGPLIIGGKSMGGRVASMVADELQAPIDGLVCLGYPFHPPG 128 (213)
T ss_pred ccCCceeeccccccchHHHHHHHhhcCCcceEEEecCccCCCC
Confidence 3667999999999999999998776555999999987665543
No 135
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=98.77 E-value=5.7e-08 Score=76.72 Aligned_cols=112 Identities=17% Similarity=0.109 Sum_probs=81.2
Q ss_pred CcEEEEEEeecCCC-C-----CcEEEEEEcCCCCCCcCchHHHHHHHHhcCCEEEEeecCCC--CCCCCCCC-----CcC
Q 026555 21 RVKLFTCSWIPQNQ-E-----PKALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGH--GKSAGLSG-----YID 87 (237)
Q Consensus 21 g~~l~~~~~~~~~~-~-----~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~--G~s~~~~~-----~~~ 87 (237)
+.++....+.|+.. . ..|+|++-||.|+....+ ..+++.+++.||.|..+|++|- |..+.... ...
T Consensus 49 ~~~~~v~~~~p~~~~~~~~~~~~PlvvlshG~Gs~~~~f-~~~A~~lAs~Gf~Va~~~hpgs~~~~~~~~~~~~~~~~p~ 127 (365)
T COG4188 49 DRERPVDLRLPQGGTGTVALYLLPLVVLSHGSGSYVTGF-AWLAEHLASYGFVVAAPDHPGSNAGGAPAAYAGPGSYAPA 127 (365)
T ss_pred CCccccceeccCCCccccccCcCCeEEecCCCCCCccch-hhhHHHHhhCceEEEeccCCCcccccCChhhcCCcccchh
Confidence 45566666665542 2 579999999999998877 8999999999999999999984 43331111 111
Q ss_pred ChhhHHHHHHHHHHHHHhh---h----hcCCceEEEEEeccchHHHHHHHhcC
Q 026555 88 NFDDLVDDCFNHFTSICEK---E----ENKEKMRYLLGESMGGAMVLLLHRKK 133 (237)
Q Consensus 88 ~~~~~~~d~~~~~~~~~~~---~----~~~~~~~~l~G~S~Gg~~a~~~a~~~ 133 (237)
.+.+...|+..+++.+.+. . +.+..+|.++|||+||+.+++.+.-.
T Consensus 128 ~~~erp~dis~lLd~L~~~~~sP~l~~~ld~~~Vgv~GhS~GG~T~m~laGA~ 180 (365)
T COG4188 128 EWWERPLDISALLDALLQLTASPALAGRLDPQRVGVLGHSFGGYTAMELAGAE 180 (365)
T ss_pred hhhcccccHHHHHHHHHHhhcCcccccccCccceEEEecccccHHHHHhcccc
Confidence 3446677888888888654 1 22346899999999999999887543
No 136
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=98.73 E-value=2.8e-07 Score=75.80 Aligned_cols=127 Identities=15% Similarity=0.127 Sum_probs=77.1
Q ss_pred CcEEEEEEeecCC--CCCcEEEEEEcCCCCCCcCchHHHHHHHHhcCC----EEEEeecCCCC-CCCCCCCCcCChhhHH
Q 026555 21 RVKLFTCSWIPQN--QEPKALIFICHGYAMECSIGMNSTAIRLANEGY----ACYGIDYQGHG-KSAGLSGYIDNFDDLV 93 (237)
Q Consensus 21 g~~l~~~~~~~~~--~~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~----~v~~~d~~g~G-~s~~~~~~~~~~~~~~ 93 (237)
|.+..++.|.|.. .++.|+|+++||-.-..........+.|.+.|. .++.+|..+.. .+........-.+.++
T Consensus 191 g~~r~v~VY~P~~y~~~~~PvlyllDG~~w~~~~~~~~~ld~li~~g~i~P~ivV~id~~~~~~R~~el~~~~~f~~~l~ 270 (411)
T PRK10439 191 GNSRRVWIYTTGDAAPEERPLAILLDGQFWAESMPVWPALDSLTHRGQLPPAVYLLIDAIDTTHRSQELPCNADFWLAVQ 270 (411)
T ss_pred CCceEEEEEECCCCCCCCCCEEEEEECHHhhhcCCHHHHHHHHHHcCCCCceEEEEECCCCcccccccCCchHHHHHHHH
Confidence 5567778888864 245799999999542222222455667766663 35667653211 1110000000112233
Q ss_pred HHHHHHHHHHHhhhhcCCceEEEEEeccchHHHHHHHhcCCCcccEEEEcCCccc
Q 026555 94 DDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCK 148 (237)
Q Consensus 94 ~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~~~~vl~~~~~~ 148 (237)
+++.-+++..- ....+.++.+|.|+||||+.|+.++.++|+.+.+++..|+..-
T Consensus 271 ~eLlP~I~~~y-~~~~d~~~~~IaG~S~GGl~AL~~al~~Pd~Fg~v~s~Sgs~w 324 (411)
T PRK10439 271 QELLPQVRAIA-PFSDDADRTVVAGQSFGGLAALYAGLHWPERFGCVLSQSGSFW 324 (411)
T ss_pred HHHHHHHHHhC-CCCCCccceEEEEEChHHHHHHHHHHhCcccccEEEEecccee
Confidence 44444444320 1122456789999999999999999999999999999998753
No 137
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=98.72 E-value=6.6e-07 Score=74.84 Aligned_cols=137 Identities=15% Similarity=0.114 Sum_probs=90.2
Q ss_pred cceeEeecC---CcEEEEEEeecCCC-CCcEEEEEEcCCCCCCcCchHHHH------------------HHHHhcCCEEE
Q 026555 12 DEEFILNSR---RVKLFTCSWIPQNQ-EPKALIFICHGYAMECSIGMNSTA------------------IRLANEGYACY 69 (237)
Q Consensus 12 ~~~~~~~~~---g~~l~~~~~~~~~~-~~~~~iv~~hG~~~~~~~~~~~~~------------------~~l~~~g~~v~ 69 (237)
...++...+ +..++|+.+..... ...|+|++++|.++.+... .-+. --+.+. .+++
T Consensus 48 ~sGy~~v~~~~~~~~lFyw~~~s~~~~~~~Pl~lwlnGGPG~ss~~-G~f~E~GP~~i~~~~~~~~~n~~sW~~~-~~~l 125 (462)
T PTZ00472 48 WSGYFDIPGNQTDKHYFYWAFGPRNGNPEAPVLLWMTGGPGCSSMF-ALLAENGPCLMNETTGDIYNNTYSWNNE-AYVI 125 (462)
T ss_pred eeEEEEeCCCCCCceEEEEEEEcCCCCCCCCEEEEECCCCcHHHHH-hhhccCCCeEEeCCCCceeECCcccccc-cCeE
Confidence 345554432 67899999976543 4579999999988766532 1110 012222 5678
Q ss_pred Eeec-CCCCCCCCCCCC-cCChhhHHHHHHHHHHHHHhhh-hcCCceEEEEEeccchHHHHHHHhcC----------CCc
Q 026555 70 GIDY-QGHGKSAGLSGY-IDNFDDLVDDCFNHFTSICEKE-ENKEKMRYLLGESMGGAMVLLLHRKK----------PDY 136 (237)
Q Consensus 70 ~~d~-~g~G~s~~~~~~-~~~~~~~~~d~~~~~~~~~~~~-~~~~~~~~l~G~S~Gg~~a~~~a~~~----------p~~ 136 (237)
.+|. .|+|.|...... ..+.++.++|+.++++...++. +....+++|+|+|+||..+..+|... +-.
T Consensus 126 ~iDqP~G~G~S~~~~~~~~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~in 205 (462)
T PTZ00472 126 YVDQPAGVGFSYADKADYDHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKGDGLYIN 205 (462)
T ss_pred EEeCCCCcCcccCCCCCCCCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccccCCceee
Confidence 8886 599988754322 2355788999999998774322 22458999999999998887666531 124
Q ss_pred ccEEEEcCCccccc
Q 026555 137 FDGAVLVAPMCKIA 150 (237)
Q Consensus 137 ~~~~vl~~~~~~~~ 150 (237)
++|+++-++..+..
T Consensus 206 LkGi~IGNg~~dp~ 219 (462)
T PTZ00472 206 LAGLAVGNGLTDPY 219 (462)
T ss_pred eEEEEEeccccChh
Confidence 78999888776553
No 138
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=98.69 E-value=5.8e-07 Score=70.87 Aligned_cols=122 Identities=16% Similarity=0.035 Sum_probs=87.4
Q ss_pred EEEEEEeecCCC--CCcEEEEEEcCCCCCCcCchHHH-HHHHHhcCCEEEEeecCCCCCCCCCC---CCcCCh-------
Q 026555 23 KLFTCSWIPQNQ--EPKALIFICHGYAMECSIGMNST-AIRLANEGYACYGIDYQGHGKSAGLS---GYIDNF------- 89 (237)
Q Consensus 23 ~l~~~~~~~~~~--~~~~~iv~~hG~~~~~~~~~~~~-~~~l~~~g~~v~~~d~~g~G~s~~~~---~~~~~~------- 89 (237)
+-++....|... +.+|++|.++|.|.+....-..+ +..|.++|+..+....|-||.-.... ......
T Consensus 76 ~a~~~~~~P~~~~~~~rp~~IhLagTGDh~f~rR~~l~a~pLl~~gi~s~~le~Pyyg~RkP~~Q~~s~l~~VsDl~~~g 155 (348)
T PF09752_consen 76 TARFQLLLPKRWDSPYRPVCIHLAGTGDHGFWRRRRLMARPLLKEGIASLILENPYYGQRKPKDQRRSSLRNVSDLFVMG 155 (348)
T ss_pred heEEEEEECCccccCCCceEEEecCCCccchhhhhhhhhhHHHHcCcceEEEecccccccChhHhhcccccchhHHHHHH
Confidence 445555556542 45899999999998765332245 78888889999999999998655221 111222
Q ss_pred hhHHHHHHHHHHHHHhhhhcCCceEEEEEeccchHHHHHHHhcCCCcccEEEEcCCcc
Q 026555 90 DDLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMC 147 (237)
Q Consensus 90 ~~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~~~~vl~~~~~ 147 (237)
...+.+...+++++ +.+ +..++.+.|.||||.+|...+...|..+..+-.+++..
T Consensus 156 ~~~i~E~~~Ll~Wl--~~~-G~~~~g~~G~SmGG~~A~laa~~~p~pv~~vp~ls~~s 210 (348)
T PF09752_consen 156 RATILESRALLHWL--ERE-GYGPLGLTGISMGGHMAALAASNWPRPVALVPCLSWSS 210 (348)
T ss_pred hHHHHHHHHHHHHH--Hhc-CCCceEEEEechhHhhHHhhhhcCCCceeEEEeecccC
Confidence 23356777788888 555 77799999999999999999999998777666665443
No 139
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=98.65 E-value=1.6e-07 Score=67.90 Aligned_cols=117 Identities=14% Similarity=0.193 Sum_probs=83.5
Q ss_pred EEEEEEeecCCCCCcEEEEEEcCC---CCCCcCchHHHHHHHHhcCCEEEEeecCCCCCCCCCCCCcCChhhHHHHHHHH
Q 026555 23 KLFTCSWIPQNQEPKALIFICHGY---AMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNH 99 (237)
Q Consensus 23 ~l~~~~~~~~~~~~~~~iv~~hG~---~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~d~~~~ 99 (237)
+.....|+|. ...+..||+||. -++.... -..+..+.+.||+|.++++ +.+... .++++.+.+....
T Consensus 55 ~q~VDIwg~~--~~~klfIfIHGGYW~~g~rk~c-lsiv~~a~~~gY~vasvgY---~l~~q~----htL~qt~~~~~~g 124 (270)
T KOG4627|consen 55 RQLVDIWGST--NQAKLFIFIHGGYWQEGDRKMC-LSIVGPAVRRGYRVASVGY---NLCPQV----HTLEQTMTQFTHG 124 (270)
T ss_pred ceEEEEecCC--CCccEEEEEecchhhcCchhcc-cchhhhhhhcCeEEEEecc---CcCccc----ccHHHHHHHHHHH
Confidence 5567778776 456789999984 2333333 3445556677999988764 454422 4678888888888
Q ss_pred HHHHHhhhhcCCceEEEEEeccchHHHHHHHh-cCCCcccEEEEcCCccccc
Q 026555 100 FTSICEKEENKEKMRYLLGESMGGAMVLLLHR-KKPDYFDGAVLVAPMCKIA 150 (237)
Q Consensus 100 ~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~-~~p~~~~~~vl~~~~~~~~ 150 (237)
++++++... +.+.+.+-|||.|+.+|..+.. ++..+|.++++.++..++.
T Consensus 125 v~filk~~~-n~k~l~~gGHSaGAHLa~qav~R~r~prI~gl~l~~GvY~l~ 175 (270)
T KOG4627|consen 125 VNFILKYTE-NTKVLTFGGHSAGAHLAAQAVMRQRSPRIWGLILLCGVYDLR 175 (270)
T ss_pred HHHHHHhcc-cceeEEEcccchHHHHHHHHHHHhcCchHHHHHHHhhHhhHH
Confidence 888864433 4567889999999999987755 4556899999998876654
No 140
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=98.63 E-value=1.9e-07 Score=70.37 Aligned_cols=94 Identities=16% Similarity=0.106 Sum_probs=52.3
Q ss_pred CCcEEEEEEcCCCCCCcCchHHHHHHHHhc--CCEEEEeecCCCCCCCCCCCCcCChhhHHHHHHHHHHHHHhhhhcCCc
Q 026555 35 EPKALIFICHGYAMECSIGMNSTAIRLANE--GYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEKEENKEK 112 (237)
Q Consensus 35 ~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~--g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 112 (237)
++...||++||+.++...| ..+...+... .+.--.+...++.... .....+++...+.+.+-+...++.......
T Consensus 2 ~~~hLvV~vHGL~G~~~d~-~~~~~~l~~~~~~~~~~~i~~~~~~~n~--~~T~~gI~~~g~rL~~eI~~~~~~~~~~~~ 78 (217)
T PF05057_consen 2 KPVHLVVFVHGLWGNPADM-RYLKNHLEKIPEDLPNARIVVLGYSNNE--FKTFDGIDVCGERLAEEILEHIKDYESKIR 78 (217)
T ss_pred CCCEEEEEeCCCCCCHHHH-HHHHHHHHHhhhhcchhhhhhhcccccc--cccchhhHHHHHHHHHHHHHhccccccccc
Confidence 4567899999999998877 6776666551 1211111222221111 111124455555444433333222222236
Q ss_pred eEEEEEeccchHHHHHHHh
Q 026555 113 MRYLLGESMGGAMVLLLHR 131 (237)
Q Consensus 113 ~~~l~G~S~Gg~~a~~~a~ 131 (237)
++.++||||||.++-.++.
T Consensus 79 ~IsfIgHSLGGli~r~al~ 97 (217)
T PF05057_consen 79 KISFIGHSLGGLIARYALG 97 (217)
T ss_pred cceEEEecccHHHHHHHHH
Confidence 8999999999999876654
No 141
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=98.63 E-value=5.1e-07 Score=75.58 Aligned_cols=131 Identities=21% Similarity=0.203 Sum_probs=87.9
Q ss_pred eeEeecCCcEEEEEEeecCC---CCCcEEEEEEcCCCCCCc-----CchHHH-HHHHHhcCCEEEEeecCCCCCCCCC--
Q 026555 14 EFILNSRRVKLFTCSWIPQN---QEPKALIFICHGYAMECS-----IGMNST-AIRLANEGYACYGIDYQGHGKSAGL-- 82 (237)
Q Consensus 14 ~~~~~~~g~~l~~~~~~~~~---~~~~~~iv~~hG~~~~~~-----~~~~~~-~~~l~~~g~~v~~~d~~g~G~s~~~-- 82 (237)
..+....|.++....+.|.+ +++.|+++++-|.++-.- .+...+ ...|+..||.|+.+|-||...-...
T Consensus 616 f~fqs~tg~~lYgmiyKPhn~~pgkkYptvl~VYGGP~VQlVnnsfkgi~ylR~~~LaslGy~Vv~IDnRGS~hRGlkFE 695 (867)
T KOG2281|consen 616 FSFQSKTGLTLYGMIYKPHNFQPGKKYPTVLNVYGGPGVQLVNNSFKGIQYLRFCRLASLGYVVVFIDNRGSAHRGLKFE 695 (867)
T ss_pred eeeecCCCcEEEEEEEccccCCCCCCCceEEEEcCCCceEEeeccccceehhhhhhhhhcceEEEEEcCCCccccchhhH
Confidence 44566778888889998865 245699999998764221 111121 3577889999999999986433211
Q ss_pred ------CCCcCChhhHHHHHHHHHHHHHhhh-hcCCceEEEEEeccchHHHHHHHhcCCCcccEEEEcCCcccc
Q 026555 83 ------SGYIDNFDDLVDDCFNHFTSICEKE-ENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKI 149 (237)
Q Consensus 83 ------~~~~~~~~~~~~d~~~~~~~~~~~~-~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~~~~vl~~~~~~~ 149 (237)
-+. -..++.++- ++.+.++. -.+..+|.+.|||.||+++++...++|+.++.+|.=+|...+
T Consensus 696 ~~ik~kmGq-VE~eDQVeg----lq~Laeq~gfidmdrV~vhGWSYGGYLSlm~L~~~P~IfrvAIAGapVT~W 764 (867)
T KOG2281|consen 696 SHIKKKMGQ-VEVEDQVEG----LQMLAEQTGFIDMDRVGVHGWSYGGYLSLMGLAQYPNIFRVAIAGAPVTDW 764 (867)
T ss_pred HHHhhccCe-eeehhhHHH----HHHHHHhcCcccchheeEeccccccHHHHHHhhcCcceeeEEeccCcceee
Confidence 111 133444444 44443332 336789999999999999999999999988777776666544
No 142
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=98.61 E-value=4.5e-06 Score=66.23 Aligned_cols=130 Identities=18% Similarity=0.229 Sum_probs=83.4
Q ss_pred EeecCCcEEEEEEeecCCC-CCcEEEEEEcCCCCCCcC--chHHHHHHHHhcCCEEEEeecCC--CCCCC----------
Q 026555 16 ILNSRRVKLFTCSWIPQNQ-EPKALIFICHGYAMECSI--GMNSTAIRLANEGYACYGIDYQG--HGKSA---------- 80 (237)
Q Consensus 16 ~~~~~g~~l~~~~~~~~~~-~~~~~iv~~hG~~~~~~~--~~~~~~~~l~~~g~~v~~~d~~g--~G~s~---------- 80 (237)
....++.+ ..-.|.|... .++++||++||.+.+... .+..+.+.|.++|+.++++.+|. .....
T Consensus 66 ~L~~~~~~-flaL~~~~~~~~~~G~vIilp~~g~~~d~p~~i~~LR~~L~~~GW~Tlsit~P~~~~~~~p~~~~~~~~~~ 144 (310)
T PF12048_consen 66 WLQAGEER-FLALWRPANSAKPQGAVIILPDWGEHPDWPGLIAPLRRELPDHGWATLSITLPDPAPPASPNRATEAEEVP 144 (310)
T ss_pred EeecCCEE-EEEEEecccCCCCceEEEEecCCCCCCCcHhHHHHHHHHhhhcCceEEEecCCCcccccCCccCCCCCCCC
Confidence 33444433 3444555543 568899999999988762 34678899999999999998887 11110
Q ss_pred --CC--CCCc------------CCh----hhHHHHHHHHHHHHHhhhhcCCceEEEEEeccchHHHHHHHhcCCC-cccE
Q 026555 81 --GL--SGYI------------DNF----DDLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPD-YFDG 139 (237)
Q Consensus 81 --~~--~~~~------------~~~----~~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~-~~~~ 139 (237)
+. .... ... ..+..-+.+++..+ .+.+..+++|+||+.|+..++.+....+. .+++
T Consensus 145 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ari~Aa~~~~---~~~~~~~ivlIg~G~gA~~~~~~la~~~~~~~da 221 (310)
T PF12048_consen 145 SAGDQQLSQPSDEPSPASAQEAEAREAYEERLFARIEAAIAFA---QQQGGKNIVLIGHGTGAGWAARYLAEKPPPMPDA 221 (310)
T ss_pred CCCCCCcCCCCCCCccccccHhHHhHHHHHHHHHHHHHHHHHH---HhcCCceEEEEEeChhHHHHHHHHhcCCCcccCe
Confidence 00 0000 001 22233444444444 22245669999999999999999888764 4899
Q ss_pred EEEcCCcccc
Q 026555 140 AVLVAPMCKI 149 (237)
Q Consensus 140 ~vl~~~~~~~ 149 (237)
+|++++-...
T Consensus 222 LV~I~a~~p~ 231 (310)
T PF12048_consen 222 LVLINAYWPQ 231 (310)
T ss_pred EEEEeCCCCc
Confidence 9999877544
No 143
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=98.60 E-value=5.3e-07 Score=63.75 Aligned_cols=94 Identities=19% Similarity=0.128 Sum_probs=64.7
Q ss_pred EEEEEEcCCCCCCcCchHHHHHHHHhcCCEEEEeecCCCCCCCCCCCCcCChhhHHHHHHHHHHHHHhhhhcCCceEEEE
Q 026555 38 ALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEKEENKEKMRYLL 117 (237)
Q Consensus 38 ~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~ 117 (237)
+.++++||+.++... .....+...--.+-.+++. .......+++++.+.+.++.. .++++++
T Consensus 3 ~~~lIVpG~~~Sg~~---HWq~~we~~l~~a~rveq~--------~w~~P~~~dWi~~l~~~v~a~-------~~~~vlV 64 (181)
T COG3545 3 TDVLIVPGYGGSGPN---HWQSRWESALPNARRVEQD--------DWEAPVLDDWIARLEKEVNAA-------EGPVVLV 64 (181)
T ss_pred ceEEEecCCCCCChh---HHHHHHHhhCccchhcccC--------CCCCCCHHHHHHHHHHHHhcc-------CCCeEEE
Confidence 358999999988763 2223332221122223332 112246788887777777665 5679999
Q ss_pred EeccchHHHHHHHhcCCCcccEEEEcCCcccc
Q 026555 118 GESMGGAMVLLLHRKKPDYFDGAVLVAPMCKI 149 (237)
Q Consensus 118 G~S~Gg~~a~~~a~~~p~~~~~~vl~~~~~~~ 149 (237)
+||+|+..++.++.+....|+|++|++|+.--
T Consensus 65 AHSLGc~~v~h~~~~~~~~V~GalLVAppd~~ 96 (181)
T COG3545 65 AHSLGCATVAHWAEHIQRQVAGALLVAPPDVS 96 (181)
T ss_pred EecccHHHHHHHHHhhhhccceEEEecCCCcc
Confidence 99999999999999887789999999987533
No 144
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=98.60 E-value=1.1e-06 Score=73.42 Aligned_cols=116 Identities=19% Similarity=0.169 Sum_probs=74.2
Q ss_pred CcEEEEEEcCCCCCCcCch-HHHHHHHHhc-CCEEEEeecCCCCCCCCCC------CCcCChhhHHHHHHHHHHHHHhhh
Q 026555 36 PKALIFICHGYAMECSIGM-NSTAIRLANE-GYACYGIDYQGHGKSAGLS------GYIDNFDDLVDDCFNHFTSICEKE 107 (237)
Q Consensus 36 ~~~~iv~~hG~~~~~~~~~-~~~~~~l~~~-g~~v~~~d~~g~G~s~~~~------~~~~~~~~~~~d~~~~~~~~~~~~ 107 (237)
+.|++|++.|=+.-...+. ..+...++++ |-.+++.++|-+|.|.... -...+.++.+.|+..+++++..+.
T Consensus 28 ~gpifl~~ggE~~~~~~~~~~~~~~~lA~~~~a~~v~lEHRyYG~S~P~~~~s~~nL~yLt~~QALaD~a~F~~~~~~~~ 107 (434)
T PF05577_consen 28 GGPIFLYIGGEGPIEPFWINNGFMWELAKEFGALVVALEHRYYGKSQPFGDLSTENLRYLTSEQALADLAYFIRYVKKKY 107 (434)
T ss_dssp TSEEEEEE--SS-HHHHHHH-HHHHHHHHHHTEEEEEE--TTSTTB-TTGGGGGSTTTC-SHHHHHHHHHHHHHHHHHHT
T ss_pred CCCEEEEECCCCccchhhhcCChHHHHHHHcCCcEEEeehhhhcCCCCccccchhhHHhcCHHHHHHHHHHHHHHHHHhh
Confidence 3677777765433222121 1244455554 7789999999999997321 112477889999999999995332
Q ss_pred -hcCCceEEEEEeccchHHHHHHHhcCCCcccEEEEcCCcccccc
Q 026555 108 -ENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKIAE 151 (237)
Q Consensus 108 -~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~~~~vl~~~~~~~~~ 151 (237)
.....|++++|-|.||++|..+-.++|+.+.+.+..|++.....
T Consensus 108 ~~~~~~pwI~~GgSY~G~Laaw~r~kyP~~~~ga~ASSapv~a~~ 152 (434)
T PF05577_consen 108 NTAPNSPWIVFGGSYGGALAAWFRLKYPHLFDGAWASSAPVQAKV 152 (434)
T ss_dssp TTGCC--EEEEEETHHHHHHHHHHHH-TTT-SEEEEET--CCHCC
T ss_pred cCCCCCCEEEECCcchhHHHHHHHhhCCCeeEEEEeccceeeeec
Confidence 22456999999999999999999999999999999988876643
No 145
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=98.58 E-value=2.1e-07 Score=74.65 Aligned_cols=104 Identities=18% Similarity=0.136 Sum_probs=74.4
Q ss_pred cEEEEEEcCCCCCCcCchHHHHHHHHhcCCE---EEEeecCCCCCCCCCCCCcCChhhHHHHHHHHHHHHHhhhhcCCce
Q 026555 37 KALIFICHGYAMECSIGMNSTAIRLANEGYA---CYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEKEENKEKM 113 (237)
Q Consensus 37 ~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~---v~~~d~~g~G~s~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 113 (237)
.-+++++||++.....+ ..+...+...|+. ++.+++++. ... ......-+++..-+.+.+... +.++
T Consensus 59 ~~pivlVhG~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~-~~~--~~~~~~~~ql~~~V~~~l~~~------ga~~ 128 (336)
T COG1075 59 KEPIVLVHGLGGGYGNF-LPLDYRLAILGWLTNGVYAFELSGG-DGT--YSLAVRGEQLFAYVDEVLAKT------GAKK 128 (336)
T ss_pred CceEEEEccCcCCcchh-hhhhhhhcchHHHhccccccccccc-CCC--ccccccHHHHHHHHHHHHhhc------CCCc
Confidence 45799999997777766 7777777777877 788888755 111 111123334444444444433 6689
Q ss_pred EEEEEeccchHHHHHHHhcCC--CcccEEEEcCCccccc
Q 026555 114 RYLLGESMGGAMVLLLHRKKP--DYFDGAVLVAPMCKIA 150 (237)
Q Consensus 114 ~~l~G~S~Gg~~a~~~a~~~p--~~~~~~vl~~~~~~~~ 150 (237)
+.++||||||.+...++...+ .+|+.++.++++-...
T Consensus 129 v~LigHS~GG~~~ry~~~~~~~~~~V~~~~tl~tp~~Gt 167 (336)
T COG1075 129 VNLIGHSMGGLDSRYYLGVLGGANRVASVVTLGTPHHGT 167 (336)
T ss_pred eEEEeecccchhhHHHHhhcCccceEEEEEEeccCCCCc
Confidence 999999999999999999888 8899999998876554
No 146
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=98.56 E-value=9.6e-07 Score=77.89 Aligned_cols=132 Identities=20% Similarity=0.184 Sum_probs=93.5
Q ss_pred cCCcEEEEEEeecCC---CCCcEEEEEEcCCCCCCc---CchHHHHH-HHHhcCCEEEEeecCCCCCCCCCCCC-c-CCh
Q 026555 19 SRRVKLFTCSWIPQN---QEPKALIFICHGYAMECS---IGMNSTAI-RLANEGYACYGIDYQGHGKSAGLSGY-I-DNF 89 (237)
Q Consensus 19 ~~g~~l~~~~~~~~~---~~~~~~iv~~hG~~~~~~---~~~~~~~~-~l~~~g~~v~~~d~~g~G~s~~~~~~-~-~~~ 89 (237)
.+|....+....|++ +++-|.+|.+||.+++.. .+-..+.. .+...|+.|+.+|.||-|........ . ..+
T Consensus 505 ~~~~~~~~~~~lP~~~~~~~kyPllv~~yGGP~sq~v~~~~~~~~~~~~~s~~g~~v~~vd~RGs~~~G~~~~~~~~~~l 584 (755)
T KOG2100|consen 505 IDGITANAILILPPNFDPSKKYPLLVVVYGGPGSQSVTSKFSVDWNEVVVSSRGFAVLQVDGRGSGGYGWDFRSALPRNL 584 (755)
T ss_pred eccEEEEEEEecCCCCCCCCCCCEEEEecCCCCcceeeeeEEecHHHHhhccCCeEEEEEcCCCcCCcchhHHHHhhhhc
Confidence 389999999998864 345689999999886322 12123333 35567999999999998755422100 0 011
Q ss_pred -hhHHHHHHHHHHHHHhhhhcCCceEEEEEeccchHHHHHHHhcCC-CcccEEEEcCCccccc
Q 026555 90 -DDLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKP-DYFDGAVLVAPMCKIA 150 (237)
Q Consensus 90 -~~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p-~~~~~~vl~~~~~~~~ 150 (237)
..-++|...+++.+++....+.+++.++|+|.||.+++..+...| +.++..+.++|..++.
T Consensus 585 G~~ev~D~~~~~~~~~~~~~iD~~ri~i~GwSyGGy~t~~~l~~~~~~~fkcgvavaPVtd~~ 647 (755)
T KOG2100|consen 585 GDVEVKDQIEAVKKVLKLPFIDRSRVAIWGWSYGGYLTLKLLESDPGDVFKCGVAVAPVTDWL 647 (755)
T ss_pred CCcchHHHHHHHHHHHhcccccHHHeEEeccChHHHHHHHHhhhCcCceEEEEEEecceeeee
Confidence 112567777777776666678899999999999999999999998 5566669999998774
No 147
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.55 E-value=3.4e-06 Score=62.95 Aligned_cols=126 Identities=21% Similarity=0.194 Sum_probs=88.0
Q ss_pred eecCCcEEEEEEeecC---CCCCcEEEEEEcCCCCCCcCchHHHHHHHHhc-C--CEEEEeecCCCCCCC---C-----C
Q 026555 17 LNSRRVKLFTCSWIPQ---NQEPKALIFICHGYAMECSIGMNSTAIRLANE-G--YACYGIDYQGHGKSA---G-----L 82 (237)
Q Consensus 17 ~~~~g~~l~~~~~~~~---~~~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~-g--~~v~~~d~~g~G~s~---~-----~ 82 (237)
.+..|..+.-..+.|. ...+++.|++++|-++....| .++++.|... + ..++.+-..||-.-+ . .
T Consensus 6 ~~~~gl~~si~~~~~~v~~~~~~~~li~~IpGNPG~~gFY-~~F~~~L~~~l~~r~~~wtIsh~~H~~~P~sl~~~~s~~ 84 (301)
T KOG3975|consen 6 YTKSGLPTSILTLKPWVTKSGEDKPLIVWIPGNPGLLGFY-TEFARHLHLNLIDRLPVWTISHAGHALMPASLREDHSHT 84 (301)
T ss_pred eeecCCcccceeeeeeeccCCCCceEEEEecCCCCchhHH-HHHHHHHHHhcccccceeEEeccccccCCcccccccccc
Confidence 3445554444444443 225688999999999999966 8999888765 2 458988888886544 1 1
Q ss_pred CCCcCChhhHHHHHHHHHHHHHhhhhcCCceEEEEEeccchHHHHHHHhcC-C-CcccEEEEcCCcc
Q 026555 83 SGYIDNFDDLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKK-P-DYFDGAVLVAPMC 147 (237)
Q Consensus 83 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~-p-~~~~~~vl~~~~~ 147 (237)
..+.++++++++.-.++++..+. ...+++++|||.|+++.+...... + -.+.+++++-|..
T Consensus 85 ~~eifsL~~QV~HKlaFik~~~P----k~~ki~iiGHSiGaYm~Lqil~~~k~~~~vqKa~~LFPTI 147 (301)
T KOG3975|consen 85 NEEIFSLQDQVDHKLAFIKEYVP----KDRKIYIIGHSIGAYMVLQILPSIKLVFSVQKAVLLFPTI 147 (301)
T ss_pred cccccchhhHHHHHHHHHHHhCC----CCCEEEEEecchhHHHHHHHhhhcccccceEEEEEecchH
Confidence 22446788888888888876632 467999999999999999988732 2 2366666664443
No 148
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=98.52 E-value=8.3e-07 Score=66.31 Aligned_cols=108 Identities=17% Similarity=0.058 Sum_probs=78.7
Q ss_pred EEEEEEcCCCCCCcCchHHHHHHHHhcC-----CEEEEeecCCC----CCCCCC----------CCCcCChhhHHHHHHH
Q 026555 38 ALIFICHGYAMECSIGMNSTAIRLANEG-----YACYGIDYQGH----GKSAGL----------SGYIDNFDDLVDDCFN 98 (237)
Q Consensus 38 ~~iv~~hG~~~~~~~~~~~~~~~l~~~g-----~~v~~~d~~g~----G~s~~~----------~~~~~~~~~~~~d~~~ 98 (237)
-+.+|+||++++.... ..++++|...+ --++..|-.|- |.=+.. .....+..++...+..
T Consensus 46 iPTIfIhGsgG~asS~-~~Mv~ql~~~~~~~~e~Lt~~V~~dgslk~tGk~~Kd~~nP~I~~gfe~n~~s~~~~s~wlk~ 124 (288)
T COG4814 46 IPTIFIHGSGGTASSL-NGMVNQLLPDYKAGTESLTMTVDVDGSLKVTGKISKDAKNPIIEFGFEDNTASGLDQSKWLKK 124 (288)
T ss_pred cceEEEecCCCChhHH-HHHHHHhhhcccccccceEEEEcCCCcEEEeeeecccCCCCeEEEEEecCcCchhhHHHHHHH
Confidence 4688999999999866 88889998873 12556666662 211110 1111355667788999
Q ss_pred HHHHHHhhhhcCCceEEEEEeccchHHHHHHHhcCCC-----cccEEEEcCCccc
Q 026555 99 HFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPD-----YFDGAVLVAPMCK 148 (237)
Q Consensus 99 ~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~-----~~~~~vl~~~~~~ 148 (237)
++..+ ..+.+..++.++||||||.-...|+..+.+ .++.+|.+++...
T Consensus 125 ~msyL--~~~Y~i~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gpfN 177 (288)
T COG4814 125 AMSYL--QKHYNIPKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGPFN 177 (288)
T ss_pred HHHHH--HHhcCCceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEeccccc
Confidence 99999 778889999999999999999988876421 2889999877766
No 149
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=98.50 E-value=7.9e-07 Score=75.47 Aligned_cols=124 Identities=19% Similarity=0.174 Sum_probs=76.7
Q ss_pred EEEEEEeecCC---CCCcEEEEEEcCCCCCCcCchHHHHHHHHhc-C-CEEEEeecC-C---CCCCCCCCCCcCChhhHH
Q 026555 23 KLFTCSWIPQN---QEPKALIFICHGYAMECSIGMNSTAIRLANE-G-YACYGIDYQ-G---HGKSAGLSGYIDNFDDLV 93 (237)
Q Consensus 23 ~l~~~~~~~~~---~~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~-g-~~v~~~d~~-g---~G~s~~~~~~~~~~~~~~ 93 (237)
.+....|.|.. .++.|+||++||.+-....--......|... + +.|+.+++| | +..+... . ..-..-+
T Consensus 78 cl~l~i~~p~~~~~~~~~pv~v~ihGG~~~~g~~~~~~~~~~~~~~~~~~vv~~~yRlg~~g~~~~~~~--~-~~~n~g~ 154 (493)
T cd00312 78 CLYLNVYTPKNTKPGNSLPVMVWIHGGGFMFGSGSLYPGDGLAREGDNVIVVSINYRLGVLGFLSTGDI--E-LPGNYGL 154 (493)
T ss_pred CCeEEEEeCCCCCCCCCCCEEEEEcCCccccCCCCCCChHHHHhcCCCEEEEEecccccccccccCCCC--C-CCcchhH
Confidence 45566667753 2457999999996422221101112344433 3 899999998 3 3222211 1 1222336
Q ss_pred HHHHHHHHHHHhh---hhcCCceEEEEEeccchHHHHHHHhc--CCCcccEEEEcCCcccc
Q 026555 94 DDCFNHFTSICEK---EENKEKMRYLLGESMGGAMVLLLHRK--KPDYFDGAVLVAPMCKI 149 (237)
Q Consensus 94 ~d~~~~~~~~~~~---~~~~~~~~~l~G~S~Gg~~a~~~a~~--~p~~~~~~vl~~~~~~~ 149 (237)
.|...+++++.+. ...+.++|.++|+|.||..+..++.. .+..++++|+.|+....
T Consensus 155 ~D~~~al~wv~~~i~~fggd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg~~~~ 215 (493)
T cd00312 155 KDQRLALKWVQDNIAAFGGDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSGSALS 215 (493)
T ss_pred HHHHHHHHHHHHHHHHhCCCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcCCccC
Confidence 6888888887432 23467899999999999988877765 34568899988765543
No 150
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=98.46 E-value=2.8e-06 Score=69.65 Aligned_cols=87 Identities=17% Similarity=0.185 Sum_probs=64.9
Q ss_pred chHHHHHHHHhcCCEE-----EE-eecCCCCCCCCCCCCcCChhhHHHHHHHHHHHHHhhhhcCCceEEEEEeccchHHH
Q 026555 53 GMNSTAIRLANEGYAC-----YG-IDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMV 126 (237)
Q Consensus 53 ~~~~~~~~l~~~g~~v-----~~-~d~~g~G~s~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a 126 (237)
+|..+++.|.+.||.. .+ +|+|= +. ...++....+.+.|+.+ .... .++++|+||||||.++
T Consensus 66 ~~~~li~~L~~~GY~~~~~l~~~pYDWR~---~~------~~~~~~~~~lk~~ie~~--~~~~-~~kv~li~HSmGgl~~ 133 (389)
T PF02450_consen 66 YFAKLIENLEKLGYDRGKDLFAAPYDWRL---SP------AERDEYFTKLKQLIEEA--YKKN-GKKVVLIAHSMGGLVA 133 (389)
T ss_pred hHHHHHHHHHhcCcccCCEEEEEeechhh---ch------hhHHHHHHHHHHHHHHH--HHhc-CCcEEEEEeCCCchHH
Confidence 3489999999988852 22 57661 11 13457778888888887 4444 7899999999999999
Q ss_pred HHHHhcCCC------cccEEEEcCCcccccc
Q 026555 127 LLLHRKKPD------YFDGAVLVAPMCKIAE 151 (237)
Q Consensus 127 ~~~a~~~p~------~~~~~vl~~~~~~~~~ 151 (237)
..+....++ .|+++|.++++.....
T Consensus 134 ~~fl~~~~~~~W~~~~i~~~i~i~~p~~Gs~ 164 (389)
T PF02450_consen 134 RYFLQWMPQEEWKDKYIKRFISIGTPFGGSP 164 (389)
T ss_pred HHHHHhccchhhHHhhhhEEEEeCCCCCCCh
Confidence 999887643 5999999998876543
No 151
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=98.44 E-value=1.5e-06 Score=66.96 Aligned_cols=112 Identities=13% Similarity=0.242 Sum_probs=73.6
Q ss_pred CCcEEEEEEcCCCCCCcCchHHHHHHHHhcCCEEEEeecCCCCCCC------CC-CC---------------C----c--
Q 026555 35 EPKALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSA------GL-SG---------------Y----I-- 86 (237)
Q Consensus 35 ~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~------~~-~~---------------~----~-- 86 (237)
+.-|++||.||.+++...| +.+.-.|+.+||.|.++++|.+-.+- .. .. . .
T Consensus 116 ~k~PvvvFSHGLggsRt~Y-Sa~c~~LAShG~VVaavEHRD~SA~~Ty~~~~~~~n~~lveq~~~ir~v~~~ekef~irN 194 (399)
T KOG3847|consen 116 DKYPVVVFSHGLGGSRTLY-SAYCTSLASHGFVVAAVEHRDRSACWTYVLKEKHENEPLVEQWIKIRLVEANEKEFHIRN 194 (399)
T ss_pred CCccEEEEecccccchhhH-HHHhhhHhhCceEEEEeecccCcceeEEEecccccCCcccccceEeeeeccCceeEEeeC
Confidence 4569999999999999977 99999999999999999999864332 00 00 0 0
Q ss_pred CChhhHHHHHHHHHHHHHhh---------------------hhcCCceEEEEEeccchHHHHHHHhcCCCcccEEEEcCC
Q 026555 87 DNFDDLVDDCFNHFTSICEK---------------------EENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAP 145 (237)
Q Consensus 87 ~~~~~~~~d~~~~~~~~~~~---------------------~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~~~~vl~~~ 145 (237)
....+-+.++..++.-+.+. ...+-.++.++|||+||..++.....+.+ ++..|++..
T Consensus 195 eqv~~R~~Ec~~aL~il~~i~~g~~~~~~L~g~~~~~~~~K~nl~~s~~aViGHSFGgAT~i~~ss~~t~-FrcaI~lD~ 273 (399)
T KOG3847|consen 195 EQVGQRAQECQKALKILEQINDGGTPDNVLPGNNSDLEQLKGNLDTSQAAVIGHSFGGATSIASSSSHTD-FRCAIALDA 273 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCchhcccCccccHHHHhcchhhhhhhheeccccchhhhhhhccccc-eeeeeeeee
Confidence 00112244555555444211 01123468999999999999888777665 555555554
Q ss_pred ccc
Q 026555 146 MCK 148 (237)
Q Consensus 146 ~~~ 148 (237)
+..
T Consensus 274 WM~ 276 (399)
T KOG3847|consen 274 WMF 276 (399)
T ss_pred eec
Confidence 433
No 152
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=98.40 E-value=1.2e-05 Score=66.34 Aligned_cols=88 Identities=16% Similarity=0.256 Sum_probs=65.3
Q ss_pred HHHHHHHHhcCCEEEEeecCCCCCCCCCCCCcCChhhHHHHHHHHHHHHHhhhhcCC-ceEEEEEeccchHHHHHHHhcC
Q 026555 55 NSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEKEENKE-KMRYLLGESMGGAMVLLLHRKK 133 (237)
Q Consensus 55 ~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~-~~~~l~G~S~Gg~~a~~~a~~~ 133 (237)
+.+.-.|. .|+.|+.+.+.-. .....++.+......++++.+. ..++. .+.+++|.|.||+.++++|+.+
T Consensus 91 SevG~AL~-~GHPvYFV~F~p~------P~pgQTl~DV~~ae~~Fv~~V~--~~hp~~~kp~liGnCQgGWa~~mlAA~~ 161 (581)
T PF11339_consen 91 SEVGVALR-AGHPVYFVGFFPE------PEPGQTLEDVMRAEAAFVEEVA--ERHPDAPKPNLIGNCQGGWAAMMLAALR 161 (581)
T ss_pred cHHHHHHH-cCCCeEEEEecCC------CCCCCcHHHHHHHHHHHHHHHH--HhCCCCCCceEEeccHHHHHHHHHHhcC
Confidence 35666664 4899988876411 1111467777777788888884 33332 3899999999999999999999
Q ss_pred CCcccEEEEcCCcccccc
Q 026555 134 PDYFDGAVLVAPMCKIAE 151 (237)
Q Consensus 134 p~~~~~~vl~~~~~~~~~ 151 (237)
|+.+.-+|+.+++...+.
T Consensus 162 Pd~~gplvlaGaPlsywa 179 (581)
T PF11339_consen 162 PDLVGPLVLAGAPLSYWA 179 (581)
T ss_pred cCccCceeecCCCccccc
Confidence 999999999987776654
No 153
>KOG3101 consensus Esterase D [General function prediction only]
Probab=98.38 E-value=9.9e-07 Score=64.17 Aligned_cols=128 Identities=17% Similarity=0.239 Sum_probs=83.8
Q ss_pred CcEEEEEEeecCC---CCCcEEEEEEcCCCCCCcCchH--HHHHHHHhcCCEEEEeec--CCC---CCCCCC--------
Q 026555 21 RVKLFTCSWIPQN---QEPKALIFICHGYAMECSIGMN--STAIRLANEGYACYGIDY--QGH---GKSAGL-------- 82 (237)
Q Consensus 21 g~~l~~~~~~~~~---~~~~~~iv~~hG~~~~~~~~~~--~~~~~l~~~g~~v~~~d~--~g~---G~s~~~-------- 82 (237)
+..|.+-.|.|+. +++.|++.++-|+.++.+.++. .+...-.++|..|+.+|- ||. |.++..
T Consensus 25 ~c~Mtf~vylPp~a~~~k~~P~lf~LSGLTCT~~Nfi~Ksg~qq~As~hgl~vV~PDTSPRG~~v~g~~eswDFG~GAGF 104 (283)
T KOG3101|consen 25 KCSMTFGVYLPPDAPRGKRCPVLFYLSGLTCTHENFIEKSGFQQQASKHGLAVVAPDTSPRGVEVAGDDESWDFGQGAGF 104 (283)
T ss_pred ccceEEEEecCCCcccCCcCceEEEecCCcccchhhHhhhhHHHhHhhcCeEEECCCCCCCccccCCCcccccccCCcee
Confidence 4577778887764 2446999999999998887643 233444557899999984 443 222210
Q ss_pred --------CCCcCCh-hhHHHHHHHHHHHHHhhhhcCCceEEEEEeccchHHHHHHHhcCCCcccEEEEcCCccccc
Q 026555 83 --------SGYIDNF-DDLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKIA 150 (237)
Q Consensus 83 --------~~~~~~~-~~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~~~~vl~~~~~~~~ 150 (237)
....+.+ +-..+++.+.++.. ....+..++.++||||||.=|+-.+.++|.+.+.+-..+|.....
T Consensus 105 YvnAt~epw~~~yrMYdYv~kELp~~l~~~--~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~kykSvSAFAPI~NP~ 179 (283)
T KOG3101|consen 105 YVNATQEPWAKHYRMYDYVVKELPQLLNSA--NVPLDPLKVGIFGHSMGGHGALTIYLKNPSKYKSVSAFAPICNPI 179 (283)
T ss_pred EEecccchHhhhhhHHHHHHHHHHHHhccc--cccccchhcceeccccCCCceEEEEEcCcccccceeccccccCcc
Confidence 0000111 22344555555422 223356689999999999999999999999988888777665543
No 154
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=98.36 E-value=3.1e-06 Score=69.39 Aligned_cols=126 Identities=19% Similarity=0.183 Sum_probs=79.5
Q ss_pred EEEEEEeecC-CCCCcEEEEEEcCCCCCCcCch--HHHHHHHHhcC-CEEEEeecC-C-CCCCCC---CCCCcCChhhHH
Q 026555 23 KLFTCSWIPQ-NQEPKALIFICHGYAMECSIGM--NSTAIRLANEG-YACYGIDYQ-G-HGKSAG---LSGYIDNFDDLV 93 (237)
Q Consensus 23 ~l~~~~~~~~-~~~~~~~iv~~hG~~~~~~~~~--~~~~~~l~~~g-~~v~~~d~~-g-~G~s~~---~~~~~~~~~~~~ 93 (237)
-|..-.|.|. ..++.|++|+|||.+-....-. ..=...|+++| +.|+++++| | .|.-.. .......-+--+
T Consensus 79 CL~LNIwaP~~~a~~~PVmV~IHGG~y~~Gs~s~~~ydgs~La~~g~vVvVSvNYRLG~lGfL~~~~~~~~~~~~~n~Gl 158 (491)
T COG2272 79 CLYLNIWAPEVPAEKLPVMVYIHGGGYIMGSGSEPLYDGSALAARGDVVVVSVNYRLGALGFLDLSSLDTEDAFASNLGL 158 (491)
T ss_pred ceeEEeeccCCCCCCCcEEEEEeccccccCCCcccccChHHHHhcCCEEEEEeCcccccceeeehhhccccccccccccH
Confidence 4566677777 4466799999999753322110 12235777887 888999987 3 232111 100101112346
Q ss_pred HHHHHHHHHHHh---hhhcCCceEEEEEeccchHHHHHHHhc--CCCcccEEEEcCCccc
Q 026555 94 DDCFNHFTSICE---KEENKEKMRYLLGESMGGAMVLLLHRK--KPDYFDGAVLVAPMCK 148 (237)
Q Consensus 94 ~d~~~~~~~~~~---~~~~~~~~~~l~G~S~Gg~~a~~~a~~--~p~~~~~~vl~~~~~~ 148 (237)
.|+..+++++.+ ....+..+|.|+|+|.|++.++.+++. ....++++|+.|+...
T Consensus 159 ~DqilALkWV~~NIe~FGGDp~NVTl~GeSAGa~si~~Lla~P~AkGLF~rAi~~Sg~~~ 218 (491)
T COG2272 159 LDQILALKWVRDNIEAFGGDPQNVTLFGESAGAASILTLLAVPSAKGLFHRAIALSGAAS 218 (491)
T ss_pred HHHHHHHHHHHHHHHHhCCCccceEEeeccchHHHHHHhhcCccchHHHHHHHHhCCCCC
Confidence 678888888743 134467899999999999888766553 2345888888887775
No 155
>PRK04940 hypothetical protein; Provisional
Probab=98.30 E-value=5.4e-06 Score=59.70 Aligned_cols=95 Identities=13% Similarity=0.102 Sum_probs=54.7
Q ss_pred EEEEcCCCCCCcCchHHHHHHHHhcCCEEEEeecCCCCCCCCCCCCcCChhhHHHHHHHHHHHHHhhhhcCCceEEEEEe
Q 026555 40 IFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEKEENKEKMRYLLGE 119 (237)
Q Consensus 40 iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~G~ 119 (237)
|+++||+.++...- ..-+..+. . +.+|.+-+-.+. ....+.+..+.+.++.+. .....+++.++|.
T Consensus 2 IlYlHGF~SS~~S~-~~Ka~~l~-~----~~p~~~~~~l~~------~~P~~a~~~l~~~i~~~~--~~~~~~~~~liGS 67 (180)
T PRK04940 2 IIYLHGFDSTSPGN-HEKVLQLQ-F----IDPDVRLISYST------LHPKHDMQHLLKEVDKML--QLSDDERPLICGV 67 (180)
T ss_pred EEEeCCCCCCCCcc-HHHHHhhe-e----eCCCCeEEECCC------CCHHHHHHHHHHHHHHhh--hccCCCCcEEEEe
Confidence 89999999988852 12222222 1 122222111110 122333344444444321 1111257999999
Q ss_pred ccchHHHHHHHhcCCCcccEEEEcCCcccccc
Q 026555 120 SMGGAMVLLLHRKKPDYFDGAVLVAPMCKIAE 151 (237)
Q Consensus 120 S~Gg~~a~~~a~~~p~~~~~~vl~~~~~~~~~ 151 (237)
|+||+.|..++.++. + ..|+++|......
T Consensus 68 SLGGyyA~~La~~~g--~-~aVLiNPAv~P~~ 96 (180)
T PRK04940 68 GLGGYWAERIGFLCG--I-RQVIFNPNLFPEE 96 (180)
T ss_pred ChHHHHHHHHHHHHC--C-CEEEECCCCChHH
Confidence 999999999999885 3 6788898887754
No 156
>PLN02633 palmitoyl protein thioesterase family protein
Probab=98.30 E-value=4.9e-05 Score=59.20 Aligned_cols=104 Identities=13% Similarity=0.125 Sum_probs=68.1
Q ss_pred EEEEEEcCCCCCCcC-chHHHHHHHHhc-CCEEEEeecCCCCCCCCCCCCcCChhhHHHHHHHHHHHHHhhhhcCCceEE
Q 026555 38 ALIFICHGYAMECSI-GMNSTAIRLANE-GYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEKEENKEKMRY 115 (237)
Q Consensus 38 ~~iv~~hG~~~~~~~-~~~~~~~~l~~~-g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 115 (237)
-++|+.||+|.++.. -+..+.+.+.+. |.-+.++.. |.+. .........+.++.+.+.+... .. -..-++
T Consensus 26 ~P~ViwHG~GD~c~~~g~~~~~~l~~~~~g~~~~~i~i---g~~~-~~s~~~~~~~Qve~vce~l~~~---~~-l~~G~n 97 (314)
T PLN02633 26 VPFIMLHGIGTQCSDATNANFTQLLTNLSGSPGFCLEI---GNGV-GDSWLMPLTQQAEIACEKVKQM---KE-LSQGYN 97 (314)
T ss_pred CCeEEecCCCcccCCchHHHHHHHHHhCCCCceEEEEE---CCCc-cccceeCHHHHHHHHHHHHhhc---hh-hhCcEE
Confidence 359999999988774 335666666443 565665543 3321 2222234555555555544442 11 123699
Q ss_pred EEEeccchHHHHHHHhcCCC--cccEEEEcCCcccc
Q 026555 116 LLGESMGGAMVLLLHRKKPD--YFDGAVLVAPMCKI 149 (237)
Q Consensus 116 l~G~S~Gg~~a~~~a~~~p~--~~~~~vl~~~~~~~ 149 (237)
++|+|.||.++-.++.+-|+ .|+.+|.++++-..
T Consensus 98 aIGfSQGGlflRa~ierc~~~p~V~nlISlggph~G 133 (314)
T PLN02633 98 IVGRSQGNLVARGLIEFCDGGPPVYNYISLAGPHAG 133 (314)
T ss_pred EEEEccchHHHHHHHHHCCCCCCcceEEEecCCCCC
Confidence 99999999999999999886 59999999876544
No 157
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=98.28 E-value=6.5e-06 Score=61.29 Aligned_cols=89 Identities=17% Similarity=0.113 Sum_probs=62.0
Q ss_pred CCcCchHHHHHHHHhcCCEEEEeecCCCCCCCCCCCCcCChhhHHHHHHHHHHHHHhhhhcCCceEEEEEeccchHHHHH
Q 026555 49 ECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLL 128 (237)
Q Consensus 49 ~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~ 128 (237)
+...| ..+...+.. .+.++.+|.+|++.+.... .+.+.+++.....+... ....+++++|||+||.++..
T Consensus 11 ~~~~~-~~~~~~l~~-~~~v~~~~~~g~~~~~~~~---~~~~~~~~~~~~~l~~~-----~~~~~~~l~g~s~Gg~~a~~ 80 (212)
T smart00824 11 GPHEY-ARLAAALRG-RRDVSALPLPGFGPGEPLP---ASADALVEAQAEAVLRA-----AGGRPFVLVGHSSGGLLAHA 80 (212)
T ss_pred cHHHH-HHHHHhcCC-CccEEEecCCCCCCCCCCC---CCHHHHHHHHHHHHHHh-----cCCCCeEEEEECHHHHHHHH
Confidence 33435 788888866 4899999999998654322 24555555444443322 24678999999999999988
Q ss_pred HHhc---CCCcccEEEEcCCcc
Q 026555 129 LHRK---KPDYFDGAVLVAPMC 147 (237)
Q Consensus 129 ~a~~---~p~~~~~~vl~~~~~ 147 (237)
.+.+ .++.+.+++++++..
T Consensus 81 ~a~~l~~~~~~~~~l~~~~~~~ 102 (212)
T smart00824 81 VAARLEARGIPPAAVVLLDTYP 102 (212)
T ss_pred HHHHHHhCCCCCcEEEEEccCC
Confidence 8875 456788998886543
No 158
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=98.26 E-value=2.8e-05 Score=66.63 Aligned_cols=125 Identities=18% Similarity=0.127 Sum_probs=72.6
Q ss_pred EEEEEEeecCCCC---CcEEEEEEcCCCCCCcC---chHHHHHHHHhcCCEEEEeecC----CCCCCCCCCCCcCChhhH
Q 026555 23 KLFTCSWIPQNQE---PKALIFICHGYAMECSI---GMNSTAIRLANEGYACYGIDYQ----GHGKSAGLSGYIDNFDDL 92 (237)
Q Consensus 23 ~l~~~~~~~~~~~---~~~~iv~~hG~~~~~~~---~~~~~~~~l~~~g~~v~~~d~~----g~G~s~~~~~~~~~~~~~ 92 (237)
-|..-.|.|.... ..|++|++||.+-.... ....-...+.+.+..|+.+++| |+-.+...... .-+.-
T Consensus 108 CL~LnI~~P~~~~~~~~lPV~v~ihGG~f~~G~~~~~~~~~~~~~~~~~vivVt~nYRlg~~Gfl~~~~~~~~--~gN~G 185 (535)
T PF00135_consen 108 CLYLNIYTPSNASSNSKLPVMVWIHGGGFMFGSGSFPPYDGASLAASKDVIVVTINYRLGAFGFLSLGDLDAP--SGNYG 185 (535)
T ss_dssp --EEEEEEETSSSSTTSEEEEEEE--STTTSSCTTSGGGHTHHHHHHHTSEEEEE----HHHHH-BSSSTTSH--BSTHH
T ss_pred HHHHhhhhccccccccccceEEEeecccccCCCcccccccccccccCCCEEEEEecccccccccccccccccC--chhhh
Confidence 5667777776532 46999999996533221 1123334556678999999998 33222211110 12344
Q ss_pred HHHHHHHHHHHHhh---hhcCCceEEEEEeccchHHHHHHHhc--CCCcccEEEEcCCcccc
Q 026555 93 VDDCFNHFTSICEK---EENKEKMRYLLGESMGGAMVLLLHRK--KPDYFDGAVLVAPMCKI 149 (237)
Q Consensus 93 ~~d~~~~~~~~~~~---~~~~~~~~~l~G~S~Gg~~a~~~a~~--~p~~~~~~vl~~~~~~~ 149 (237)
+.|...+++++.+. ...+.++|.|+|+|.||..+..++.. ....++++|+.|+....
T Consensus 186 l~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SGs~~~ 247 (535)
T PF00135_consen 186 LLDQRLALKWVQDNIAAFGGDPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSGSALS 247 (535)
T ss_dssp HHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES--TTS
T ss_pred hhhhHHHHHHHHhhhhhcccCCcceeeeeecccccccceeeecccccccccccccccccccc
Confidence 67888888888431 23467899999999999777655543 34679999999875543
No 159
>COG3150 Predicted esterase [General function prediction only]
Probab=98.22 E-value=9.3e-06 Score=56.96 Aligned_cols=94 Identities=15% Similarity=0.168 Sum_probs=62.9
Q ss_pred EEEEcCCCCCCcCchHHHHHHHHhcCCEEEEeecCCCCCCCCCCCCcCChhhHHHHHHHHHHHHHhhhhcCCceEEEEEe
Q 026555 40 IFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEKEENKEKMRYLLGE 119 (237)
Q Consensus 40 iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~G~ 119 (237)
|+++|||.++....-..+...+-+ .|.|-.+.+..... .++.+.++.+..++... ......++|-
T Consensus 2 ilYlHGFnSSP~shka~l~~q~~~-------~~~~~i~y~~p~l~--h~p~~a~~ele~~i~~~------~~~~p~ivGs 66 (191)
T COG3150 2 ILYLHGFNSSPGSHKAVLLLQFID-------EDVRDIEYSTPHLP--HDPQQALKELEKAVQEL------GDESPLIVGS 66 (191)
T ss_pred eEEEecCCCCcccHHHHHHHHHHh-------ccccceeeecCCCC--CCHHHHHHHHHHHHHHc------CCCCceEEee
Confidence 899999999777442222222222 24444454443322 36778888888888777 6667999999
Q ss_pred ccchHHHHHHHhcCCCcccEEEEcCCcccccc
Q 026555 120 SMGGAMVLLLHRKKPDYFDGAVLVAPMCKIAE 151 (237)
Q Consensus 120 S~Gg~~a~~~a~~~p~~~~~~vl~~~~~~~~~ 151 (237)
|+||+.|..++.+.. ++ .|+++|......
T Consensus 67 sLGGY~At~l~~~~G--ir-av~~NPav~P~e 95 (191)
T COG3150 67 SLGGYYATWLGFLCG--IR-AVVFNPAVRPYE 95 (191)
T ss_pred cchHHHHHHHHHHhC--Ch-hhhcCCCcCchh
Confidence 999999999998874 33 345566665543
No 160
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=98.20 E-value=3.3e-06 Score=70.88 Aligned_cols=143 Identities=15% Similarity=0.242 Sum_probs=99.9
Q ss_pred cccceeEeecCCcEEEEEEeecCC---CCCcEEEEEEcC-CCCCCcCchHHHHHHHHhcCCEEEEeecCCCCCCCCC---
Q 026555 10 KYDEEFILNSRRVKLFTCSWIPQN---QEPKALIFICHG-YAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGL--- 82 (237)
Q Consensus 10 ~~~~~~~~~~~g~~l~~~~~~~~~---~~~~~~iv~~hG-~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~--- 82 (237)
..+..++...||+.+......... .+.+|.+|..+| ++.+....|+.-..-|...|+.....|.||=|.-...
T Consensus 440 ~~~r~~~~SkDGt~VPM~Iv~kk~~k~dg~~P~LLygYGay~isl~p~f~~srl~lld~G~Vla~a~VRGGGe~G~~WHk 519 (712)
T KOG2237|consen 440 VVERIEVSSKDGTKVPMFIVYKKDIKLDGSKPLLLYGYGAYGISLDPSFRASRLSLLDRGWVLAYANVRGGGEYGEQWHK 519 (712)
T ss_pred EEEEEEEecCCCCccceEEEEechhhhcCCCceEEEEecccceeeccccccceeEEEecceEEEEEeeccCcccccchhh
Confidence 344566778899887766665332 245677776665 3333333334333344457888788899997754422
Q ss_pred CCCcCChhhHHHHHHHHHHHHHhhhhcCCceEEEEEeccchHHHHHHHhcCCCcccEEEEcCCccccccc
Q 026555 83 SGYIDNFDDLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKIAEN 152 (237)
Q Consensus 83 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~~~~vl~~~~~~~~~~ 152 (237)
.+....-.+..+|..+..+++++.......+..+.|.|.||.++...+.++|+++.++|+--|..+....
T Consensus 520 ~G~lakKqN~f~Dfia~AeyLve~gyt~~~kL~i~G~SaGGlLvga~iN~rPdLF~avia~VpfmDvL~t 589 (712)
T KOG2237|consen 520 DGRLAKKQNSFDDFIACAEYLVENGYTQPSKLAIEGGSAGGLLVGACINQRPDLFGAVIAKVPFMDVLNT 589 (712)
T ss_pred ccchhhhcccHHHHHHHHHHHHHcCCCCccceeEecccCccchhHHHhccCchHhhhhhhcCcceehhhh
Confidence 1222233556788889999997776667889999999999999999999999999999998888776543
No 161
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=98.20 E-value=8.2e-05 Score=59.84 Aligned_cols=117 Identities=17% Similarity=0.262 Sum_probs=75.2
Q ss_pred EEEee-cCC--CCCcEEEEEEcCCCCCCcCc------hHHHHHHHHhcCCEEEEeecCCCCCCCCCCCCcCChhhHHHHH
Q 026555 26 TCSWI-PQN--QEPKALIFICHGYAMECSIG------MNSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDDLVDDC 96 (237)
Q Consensus 26 ~~~~~-~~~--~~~~~~iv~~hG~~~~~~~~------~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~d~ 96 (237)
++... |.. .+..|+|+++||.|-..... +..+...|. ...+++.|+.-...- ..+ ..+..++.++
T Consensus 108 ~Wlvk~P~~~~pk~DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l~--~~SILvLDYsLt~~~--~~~--~~yPtQL~ql 181 (374)
T PF10340_consen 108 YWLVKAPNRFKPKSDPVLIYLHGGGYFLGTTPSQIEFLLNIYKLLP--EVSILVLDYSLTSSD--EHG--HKYPTQLRQL 181 (374)
T ss_pred EEEEeCCcccCCCCCcEEEEEcCCeeEecCCHHHHHHHHHHHHHcC--CCeEEEEeccccccc--cCC--CcCchHHHHH
Confidence 44444 443 13469999999987655533 122333333 357888887532200 011 3455667788
Q ss_pred HHHHHHHHhhhhcCCceEEEEEeccchHHHHHHHhc--C---CCcccEEEEcCCccccc
Q 026555 97 FNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRK--K---PDYFDGAVLVAPMCKIA 150 (237)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~--~---p~~~~~~vl~~~~~~~~ 150 (237)
.+..+++++ ..+.++++++|-|.||.+++.++.- . ....+++|++||+....
T Consensus 182 v~~Y~~Lv~--~~G~~nI~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~l~ 238 (374)
T PF10340_consen 182 VATYDYLVE--SEGNKNIILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVNLV 238 (374)
T ss_pred HHHHHHHHh--ccCCCeEEEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcCCc
Confidence 888888842 2367899999999999999876542 1 12378999999998876
No 162
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.19 E-value=2.3e-05 Score=67.46 Aligned_cols=109 Identities=13% Similarity=0.059 Sum_probs=68.9
Q ss_pred cEEEEEEcCCCCCCcCchHHHHHHHHh----------------cCCEEEEeecCCCCCCCCCCCCcCChhhHHHHHHHHH
Q 026555 37 KALIFICHGYAMECSIGMNSTAIRLAN----------------EGYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHF 100 (237)
Q Consensus 37 ~~~iv~~hG~~~~~~~~~~~~~~~l~~----------------~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~d~~~~~ 100 (237)
.-+|+|++|-.++...- ++++....+ ..|..++.|+-+--.. -+-..+.+.++-+.++|
T Consensus 89 GIPVLFIPGNAGSyKQv-RSiAS~a~n~y~~~~~e~t~~~d~~~~~DFFaVDFnEe~tA----m~G~~l~dQtEYV~dAI 163 (973)
T KOG3724|consen 89 GIPVLFIPGNAGSYKQV-RSIASVAQNAYQGGPFEKTEDRDNPFSFDFFAVDFNEEFTA----MHGHILLDQTEYVNDAI 163 (973)
T ss_pred CceEEEecCCCCchHHH-HHHHHHHhhhhcCCchhhhhcccCccccceEEEcccchhhh----hccHhHHHHHHHHHHHH
Confidence 44799999999988855 777655542 1245566665431000 00024566677777777
Q ss_pred HHHHhhhhc----C---CceEEEEEeccchHHHHHHHhc---CCCcccEEEEcCCccccc
Q 026555 101 TSICEKEEN----K---EKMRYLLGESMGGAMVLLLHRK---KPDYFDGAVLVAPMCKIA 150 (237)
Q Consensus 101 ~~~~~~~~~----~---~~~~~l~G~S~Gg~~a~~~a~~---~p~~~~~~vl~~~~~~~~ 150 (237)
+.+++..+. . +..|+++||||||.+|...+.. .++.|.-++..+++....
T Consensus 164 k~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tlkn~~~~sVntIITlssPH~a~ 223 (973)
T KOG3724|consen 164 KYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLTLKNEVQGSVNTIITLSSPHAAP 223 (973)
T ss_pred HHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHhhhhhccchhhhhhhhcCcccCC
Confidence 766543222 2 4469999999999999876643 355677777777665544
No 163
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=98.18 E-value=8.8e-05 Score=61.57 Aligned_cols=138 Identities=20% Similarity=0.178 Sum_probs=87.7
Q ss_pred ccceeEeec--CCcEEEEEEeecCCC-CCcEEEEEEcCCCCCCcCchHHHH-------------------HHHHhcCCEE
Q 026555 11 YDEEFILNS--RRVKLFTCSWIPQNQ-EPKALIFICHGYAMECSIGMNSTA-------------------IRLANEGYAC 68 (237)
Q Consensus 11 ~~~~~~~~~--~g~~l~~~~~~~~~~-~~~~~iv~~hG~~~~~~~~~~~~~-------------------~~l~~~g~~v 68 (237)
....++... .+..++|+.+...+. +..|+||++.|.++.+.++ ..+. .-+.+. .++
T Consensus 11 ~~sGyl~~~~~~~~~lfyw~~~s~~~~~~~Pl~~wlnGGPG~SS~~-g~f~e~GP~~~~~~~~~~l~~n~~sW~~~-an~ 88 (415)
T PF00450_consen 11 QYSGYLPVNDNENAHLFYWFFESRNDPEDDPLILWLNGGPGCSSMW-GLFGENGPFRINPDGPYTLEDNPYSWNKF-ANL 88 (415)
T ss_dssp EEEEEEEECTTTTEEEEEEEEE-SSGGCSS-EEEEEE-TTTB-THH-HHHCTTSSEEEETTSTSEEEE-TT-GGGT-SEE
T ss_pred EEEEEEecCCCCCcEEEEEEEEeCCCCCCccEEEEecCCceecccc-ccccccCceEEeecccccccccccccccc-cce
Confidence 334555555 578999999976643 4579999999998876644 1110 011222 678
Q ss_pred EEeec-CCCCCCCCCCCC--cCChhhHHHHHHHHHHHHHhhh-hcCCceEEEEEeccchHHHHHHHh----cC------C
Q 026555 69 YGIDY-QGHGKSAGLSGY--IDNFDDLVDDCFNHFTSICEKE-ENKEKMRYLLGESMGGAMVLLLHR----KK------P 134 (237)
Q Consensus 69 ~~~d~-~g~G~s~~~~~~--~~~~~~~~~d~~~~~~~~~~~~-~~~~~~~~l~G~S~Gg~~a~~~a~----~~------p 134 (237)
+.+|. .|.|.|...... ..+.++.++|+..+++....+. +....+++|.|.|.||..+-.+|. .. +
T Consensus 89 l~iD~PvGtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~ 168 (415)
T PF00450_consen 89 LFIDQPVGTGFSYGNDPSDYVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQNKKGDQPK 168 (415)
T ss_dssp EEE--STTSTT-EESSGGGGS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC--STT
T ss_pred EEEeecCceEEeeccccccccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhccccccccc
Confidence 89994 599999754432 3467888889999888775543 334559999999999976554443 33 3
Q ss_pred CcccEEEEcCCccccc
Q 026555 135 DYFDGAVLVAPMCKIA 150 (237)
Q Consensus 135 ~~~~~~vl~~~~~~~~ 150 (237)
-.++|+++-++..+..
T Consensus 169 inLkGi~IGng~~dp~ 184 (415)
T PF00450_consen 169 INLKGIAIGNGWIDPR 184 (415)
T ss_dssp SEEEEEEEESE-SBHH
T ss_pred cccccceecCcccccc
Confidence 4589999998887764
No 164
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=98.17 E-value=3.9e-06 Score=70.07 Aligned_cols=145 Identities=14% Similarity=0.180 Sum_probs=103.8
Q ss_pred ccCccccceeEeecCCcEEEEEEeecC-CCCCcEEEEEEcCC-CCCCcCchHHHHHHHHhcCCEEEEeecCCCCCCCCC-
Q 026555 6 DHNIKYDEEFILNSRRVKLFTCSWIPQ-NQEPKALIFICHGY-AMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGL- 82 (237)
Q Consensus 6 ~~~~~~~~~~~~~~~g~~l~~~~~~~~-~~~~~~~iv~~hG~-~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~- 82 (237)
+.++..++.+.++.||++|.|-..... ...+.|++|+--|. ..+....+......+.++|...+..+.||=|.=...
T Consensus 389 a~~~~veQ~~atSkDGT~IPYFiv~K~~~~d~~pTll~aYGGF~vsltP~fs~~~~~WLerGg~~v~ANIRGGGEfGp~W 468 (648)
T COG1505 389 ADNYEVEQFFATSKDGTRIPYFIVRKGAKKDENPTLLYAYGGFNISLTPRFSGSRKLWLERGGVFVLANIRGGGEFGPEW 468 (648)
T ss_pred ccCceEEEEEEEcCCCccccEEEEecCCcCCCCceEEEeccccccccCCccchhhHHHHhcCCeEEEEecccCCccCHHH
Confidence 345667778888999999999999622 11346666655432 222222225555777788998899999997754321
Q ss_pred --CCCcCChhhHHHHHHHHHHHHHhhhhcCCceEEEEEeccchHHHHHHHhcCCCcccEEEEcCCccccc
Q 026555 83 --SGYIDNFDDLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKIA 150 (237)
Q Consensus 83 --~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~~~~vl~~~~~~~~ 150 (237)
.....+-....+|..++.+.++++.-..++++.+.|-|-||++.-....++|+.+.++|+--|..++.
T Consensus 469 H~Aa~k~nrq~vfdDf~AVaedLi~rgitspe~lgi~GgSNGGLLvg~alTQrPelfgA~v~evPllDMl 538 (648)
T COG1505 469 HQAGMKENKQNVFDDFIAVAEDLIKRGITSPEKLGIQGGSNGGLLVGAALTQRPELFGAAVCEVPLLDML 538 (648)
T ss_pred HHHHhhhcchhhhHHHHHHHHHHHHhCCCCHHHhhhccCCCCceEEEeeeccChhhhCceeeccchhhhh
Confidence 11112345667899999999976655567899999999999999999999999999999988887764
No 165
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=98.17 E-value=1.1e-05 Score=59.39 Aligned_cols=104 Identities=19% Similarity=0.157 Sum_probs=72.9
Q ss_pred EEEEEEcCCCCCCcCchHHHHHHHHhcCCEEEEeecC-CCCCCCCCC-------CCcCChhhHHHHHHHHHHHHHhhhhc
Q 026555 38 ALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQ-GHGKSAGLS-------GYIDNFDDLVDDCFNHFTSICEKEEN 109 (237)
Q Consensus 38 ~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~-g~G~s~~~~-------~~~~~~~~~~~d~~~~~~~~~~~~~~ 109 (237)
..||++-.+-+....-.+..++.++.+||.|+.||+. |--.|.... -...+.+....++..+++++ +.+.
T Consensus 40 ~~li~i~DvfG~~~~n~r~~Adk~A~~Gy~v~vPD~~~Gdp~~~~~~~~~~~~w~~~~~~~~~~~~i~~v~k~l--k~~g 117 (242)
T KOG3043|consen 40 KVLIVIQDVFGFQFPNTREGADKVALNGYTVLVPDFFRGDPWSPSLQKSERPEWMKGHSPPKIWKDITAVVKWL--KNHG 117 (242)
T ss_pred eEEEEEEeeeccccHHHHHHHHHHhcCCcEEEcchhhcCCCCCCCCChhhhHHHHhcCCcccchhHHHHHHHHH--HHcC
Confidence 4566665554444433378999999999999999975 311222100 01124566678999999999 5666
Q ss_pred CCceEEEEEeccchHHHHHHHhcCCCcccEEEEcC
Q 026555 110 KEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVA 144 (237)
Q Consensus 110 ~~~~~~l~G~S~Gg~~a~~~a~~~p~~~~~~vl~~ 144 (237)
+.+++-++|++|||-++..+....| .+.++++.-
T Consensus 118 ~~kkIGv~GfCwGak~vv~~~~~~~-~f~a~v~~h 151 (242)
T KOG3043|consen 118 DSKKIGVVGFCWGAKVVVTLSAKDP-EFDAGVSFH 151 (242)
T ss_pred CcceeeEEEEeecceEEEEeeccch-hheeeeEec
Confidence 6889999999999999998888887 466666653
No 166
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=98.14 E-value=9.9e-05 Score=59.61 Aligned_cols=129 Identities=19% Similarity=0.252 Sum_probs=82.4
Q ss_pred CCcEEEEEEeecCCCCCcEEEEEEcCCCCCCcCc-hHHHHHHHHhcCCEEEE--eecCCCCCCCCC--------------
Q 026555 20 RRVKLFTCSWIPQNQEPKALIFICHGYAMECSIG-MNSTAIRLANEGYACYG--IDYQGHGKSAGL-------------- 82 (237)
Q Consensus 20 ~g~~l~~~~~~~~~~~~~~~iv~~hG~~~~~~~~-~~~~~~~l~~~g~~v~~--~d~~g~G~s~~~-------------- 82 (237)
...++.|+....+....+..|++++|+|++.... ++.+.+.+++. |.|++ +++.+.|.-+..
T Consensus 18 R~sKLEyri~ydd~Ke~kaIvfiI~GfG~dan~~~~d~~r~~iA~~-fnvv~I~V~YHCf~~R~q~~A~~~~~~~D~~iL 96 (403)
T PF11144_consen 18 RESKLEYRISYDDEKEIKAIVFIIPGFGADANSNYLDFMREYIAKK-FNVVVISVNYHCFCNRPQYGAKFYFDDIDKEIL 96 (403)
T ss_pred ccceeeEEeecCCCCCceEEEEEeCCcCCCcchHHHHHHHHHHHHh-CCEEEEEeeeeheeeccccCchhcCCHHHHHHH
Confidence 3467888887666556788999999999998853 34666777776 77655 455554422210
Q ss_pred --------C--CCcC---ChhhH-------------------------------------------HHHHHHHHHHHHhh
Q 026555 83 --------S--GYID---NFDDL-------------------------------------------VDDCFNHFTSICEK 106 (237)
Q Consensus 83 --------~--~~~~---~~~~~-------------------------------------------~~d~~~~~~~~~~~ 106 (237)
. .... ..... +.|+..++..++..
T Consensus 97 k~~L~~i~i~~~~i~~~~~~~~~~~~L~~~I~~lK~~~~L~~d~kl~ls~tl~P~n~EYQN~GIMqAiD~INAl~~l~k~ 176 (403)
T PF11144_consen 97 KKSLEKINIDSESINTYDNAEQIYELLNQNITELKEQGILPQDYKLNLSCTLIPPNGEYQNFGIMQAIDIINALLDLKKI 176 (403)
T ss_pred HHHHHHcCccccccccchhHHHHHHHHHHHHHHHHhcCCCCCCcEEeEEEEecCCchhhhhhHHHHHHHHHHHHHHHHHh
Confidence 0 0000 00000 33444444444332
Q ss_pred hhcCC--ceEEEEEeccchHHHHHHHhcCCCcccEEEEcCCcccc
Q 026555 107 EENKE--KMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKI 149 (237)
Q Consensus 107 ~~~~~--~~~~l~G~S~Gg~~a~~~a~~~p~~~~~~vl~~~~~~~ 149 (237)
-.... -|++++|+|-||++|.+.|+-.|..+.+++=.|+....
T Consensus 177 ~~~~~~~lp~I~~G~s~G~yla~l~~k~aP~~~~~~iDns~~~~p 221 (403)
T PF11144_consen 177 FPKNGGGLPKIYIGSSHGGYLAHLCAKIAPWLFDGVIDNSSYALP 221 (403)
T ss_pred hhcccCCCcEEEEecCcHHHHHHHHHhhCccceeEEEecCccccc
Confidence 22222 48999999999999999999999999998887766543
No 167
>PLN02606 palmitoyl-protein thioesterase
Probab=98.12 E-value=4.4e-05 Score=59.41 Aligned_cols=105 Identities=16% Similarity=0.158 Sum_probs=65.6
Q ss_pred EEEEEEcCCCCCCcC-chHHHHHHHHhc-CCEEEEeecCCCCCCCCCCCCcCChhhHHHHHHHHHHHHHhhhhcCCceEE
Q 026555 38 ALIFICHGYAMECSI-GMNSTAIRLANE-GYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEKEENKEKMRY 115 (237)
Q Consensus 38 ~~iv~~hG~~~~~~~-~~~~~~~~l~~~-g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 115 (237)
-+||+.||+|.++.. .+..+.+.+.+. |+-+.++. .|-+. .........+.++.+.+.+... .. -..-++
T Consensus 27 ~PvViwHGlgD~~~~~~~~~~~~~i~~~~~~pg~~v~-ig~~~---~~s~~~~~~~Qv~~vce~l~~~---~~-L~~G~n 98 (306)
T PLN02606 27 VPFVLFHGFGGECSNGKVSNLTQFLINHSGYPGTCVE-IGNGV---QDSLFMPLRQQASIACEKIKQM---KE-LSEGYN 98 (306)
T ss_pred CCEEEECCCCcccCCchHHHHHHHHHhCCCCCeEEEE-ECCCc---ccccccCHHHHHHHHHHHHhcc---hh-hcCceE
Confidence 359999999955542 336777777533 66555554 23221 1111123444444444444332 11 124699
Q ss_pred EEEeccchHHHHHHHhcCCC--cccEEEEcCCccccc
Q 026555 116 LLGESMGGAMVLLLHRKKPD--YFDGAVLVAPMCKIA 150 (237)
Q Consensus 116 l~G~S~Gg~~a~~~a~~~p~--~~~~~vl~~~~~~~~ 150 (237)
++|+|.||.++-.++.+.|+ .|+.+|.++++-...
T Consensus 99 aIGfSQGglflRa~ierc~~~p~V~nlISlggph~Gv 135 (306)
T PLN02606 99 IVAESQGNLVARGLIEFCDNAPPVINYVSLGGPHAGV 135 (306)
T ss_pred EEEEcchhHHHHHHHHHCCCCCCcceEEEecCCcCCc
Confidence 99999999999999999876 499999998765443
No 168
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=98.09 E-value=1.7e-05 Score=61.12 Aligned_cols=107 Identities=18% Similarity=0.207 Sum_probs=51.6
Q ss_pred EEEEEEcCCCCCCcC--chHHHHHHHHhc--CCEEEEeecCCCCCC-CCCCCCcCChhhHHHHHHHHHHHHHhhhhcCCc
Q 026555 38 ALIFICHGYAMECSI--GMNSTAIRLANE--GYACYGIDYQGHGKS-AGLSGYIDNFDDLVDDCFNHFTSICEKEENKEK 112 (237)
Q Consensus 38 ~~iv~~hG~~~~~~~--~~~~~~~~l~~~--g~~v~~~d~~g~G~s-~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 112 (237)
.+||+.||+|.++.. .+..+...+.+. |--|.+++. |-+.+ +..........+.++.+.+.++.. .. -..
T Consensus 6 ~PvViwHGmGD~~~~~~~m~~i~~~i~~~~PG~yV~si~i-g~~~~~D~~~s~f~~v~~Qv~~vc~~l~~~---p~-L~~ 80 (279)
T PF02089_consen 6 LPVVIWHGMGDSCCNPSSMGSIKELIEEQHPGTYVHSIEI-GNDPSEDVENSFFGNVNDQVEQVCEQLAND---PE-LAN 80 (279)
T ss_dssp --EEEE--TT--S--TTTHHHHHHHHHHHSTT--EEE--S-SSSHHHHHHHHHHSHHHHHHHHHHHHHHH----GG-GTT
T ss_pred CcEEEEEcCccccCChhHHHHHHHHHHHhCCCceEEEEEE-CCCcchhhhhhHHHHHHHHHHHHHHHHhhC---hh-hhc
Confidence 469999999987642 234554444443 555666665 22211 101111112333334444433332 11 125
Q ss_pred eEEEEEeccchHHHHHHHhcCCC-cccEEEEcCCcccc
Q 026555 113 MRYLLGESMGGAMVLLLHRKKPD-YFDGAVLVAPMCKI 149 (237)
Q Consensus 113 ~~~l~G~S~Gg~~a~~~a~~~p~-~~~~~vl~~~~~~~ 149 (237)
-++++|+|.||.++-.++.+.|+ .|+.+|.++++-..
T Consensus 81 G~~~IGfSQGgl~lRa~vq~c~~~~V~nlISlggph~G 118 (279)
T PF02089_consen 81 GFNAIGFSQGGLFLRAYVQRCNDPPVHNLISLGGPHMG 118 (279)
T ss_dssp -EEEEEETCHHHHHHHHHHH-TSS-EEEEEEES--TT-
T ss_pred ceeeeeeccccHHHHHHHHHCCCCCceeEEEecCcccc
Confidence 79999999999999999999764 59999999876543
No 169
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=98.09 E-value=2.6e-05 Score=56.92 Aligned_cols=110 Identities=15% Similarity=0.039 Sum_probs=70.2
Q ss_pred cEEEEEEcCCCCCCcCchHHHHHHHHhcCCEEEEeecCCCCCCC-----------------CCCCCcCChhhHHHHHHHH
Q 026555 37 KALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSA-----------------GLSGYIDNFDDLVDDCFNH 99 (237)
Q Consensus 37 ~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~-----------------~~~~~~~~~~~~~~d~~~~ 99 (237)
+.+||++||.+.+...| ..+.+.+.-.+...+++.-|-.-.+. ....+...+...++.+..+
T Consensus 3 ~atIi~LHglGDsg~~~-~~~~~~l~l~NiKwIcP~aP~rpvt~~~G~~~~aWfd~~~~~~~~~~d~~~~~~aa~~i~~L 81 (206)
T KOG2112|consen 3 TATIIFLHGLGDSGSGW-AQFLKQLPLPNIKWICPTAPSRPVTLNGGAFMNAWFDIMELSSDAPEDEEGLHRAADNIANL 81 (206)
T ss_pred eEEEEEEecCCCCCccH-HHHHHcCCCCCeeEEcCCCCCCcccccCCCcccceecceeeCcccchhhhHHHHHHHHHHHH
Confidence 45799999999999988 66666665555566666443321111 0001112333344445555
Q ss_pred HHHHHhhhhcCCceEEEEEeccchHHHHHHHhcCCCcccEEEEcCCccc
Q 026555 100 FTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCK 148 (237)
Q Consensus 100 ~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~~~~vl~~~~~~ 148 (237)
++.-. ......+++.+-|+|+||.++++.+..+|..+.+++-.++...
T Consensus 82 i~~e~-~~Gi~~~rI~igGfs~G~a~aL~~~~~~~~~l~G~~~~s~~~p 129 (206)
T KOG2112|consen 82 IDNEP-ANGIPSNRIGIGGFSQGGALALYSALTYPKALGGIFALSGFLP 129 (206)
T ss_pred HHHHH-HcCCCccceeEcccCchHHHHHHHHhccccccceeeccccccc
Confidence 54432 1222456899999999999999999999888888877665544
No 170
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=98.07 E-value=2.8e-05 Score=65.85 Aligned_cols=136 Identities=14% Similarity=0.222 Sum_probs=94.1
Q ss_pred ecCCcEEEEEEeecCC---CCCcEEEEEEcCC-CCCCcCchHHHHHHHHhcCCEEEEeecCCCCCCCCCC---CCcCChh
Q 026555 18 NSRRVKLFTCSWIPQN---QEPKALIFICHGY-AMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLS---GYIDNFD 90 (237)
Q Consensus 18 ~~~g~~l~~~~~~~~~---~~~~~~iv~~hG~-~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~---~~~~~~~ 90 (237)
..||..|......... .++.|+++..-|. |.+....|+...--|..+|+...+...||=|.-.... +....-.
T Consensus 426 a~dgv~VPVSLvyrkd~~~~g~~p~lLygYGaYG~s~~p~Fs~~~lSLlDRGfiyAIAHVRGGgelG~~WYe~GK~l~K~ 505 (682)
T COG1770 426 ADDGVQVPVSLVYRKDTKLDGSAPLLLYGYGAYGISMDPSFSIARLSLLDRGFVYAIAHVRGGGELGRAWYEDGKLLNKK 505 (682)
T ss_pred cCCCcEeeEEEEEecccCCCCCCcEEEEEeccccccCCcCcccceeeeecCceEEEEEEeecccccChHHHHhhhhhhcc
Confidence 3788887766665432 2556777777663 4444444454444566789876677778876554221 1111223
Q ss_pred hHHHHHHHHHHHHHhhhhcCCceEEEEEeccchHHHHHHHhcCCCcccEEEEcCCcccccccc
Q 026555 91 DLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKIAENV 153 (237)
Q Consensus 91 ~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~~~~vl~~~~~~~~~~~ 153 (237)
+-.+|..++.+++++......+.++++|-|.||++.-..+.+.|+.++++|+--|..+....|
T Consensus 506 NTf~DFIa~a~~Lv~~g~~~~~~i~a~GGSAGGmLmGav~N~~P~lf~~iiA~VPFVDvltTM 568 (682)
T COG1770 506 NTFTDFIAAARHLVKEGYTSPDRIVAIGGSAGGMLMGAVANMAPDLFAGIIAQVPFVDVLTTM 568 (682)
T ss_pred ccHHHHHHHHHHHHHcCcCCccceEEeccCchhHHHHHHHhhChhhhhheeecCCccchhhhh
Confidence 345677777787766666667799999999999999999999999999999999988876655
No 171
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=98.07 E-value=3.9e-05 Score=61.35 Aligned_cols=104 Identities=14% Similarity=0.098 Sum_probs=76.9
Q ss_pred cEEEEEEeecCCCCCcEEEEEEcCCCCCCcCchHHHHHHHHhcCCEEEEeecCCCCCCCCCCCCcCChhhHHHHHHHHHH
Q 026555 22 VKLFTCSWIPQNQEPKALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFT 101 (237)
Q Consensus 22 ~~l~~~~~~~~~~~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~d~~~~~~ 101 (237)
..+...++..+.++..-.-||..|-|+-...- +.+...|.++|+.|+.+|-.-+--|. .+.++.++|+..+++
T Consensus 245 eaLPV~e~~a~~~~sd~~av~~SGDGGWr~lD-k~v~~~l~~~gvpVvGvdsLRYfW~~------rtPe~~a~Dl~r~i~ 317 (456)
T COG3946 245 EALPVVEVPAKPGNSDTVAVFYSGDGGWRDLD-KEVAEALQKQGVPVVGVDSLRYFWSE------RTPEQIAADLSRLIR 317 (456)
T ss_pred CCCCceeeccCCCCcceEEEEEecCCchhhhh-HHHHHHHHHCCCceeeeehhhhhhcc------CCHHHHHHHHHHHHH
Confidence 34444444322222345677777877766655 68899999999999999976555444 477899999999999
Q ss_pred HHHhhhhcCCceEEEEEeccchHHHHHHHhcCC
Q 026555 102 SICEKEENKEKMRYLLGESMGGAMVLLLHRKKP 134 (237)
Q Consensus 102 ~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p 134 (237)
+. ..+.+.+++.++|+|+|+-+.-....+.|
T Consensus 318 ~y--~~~w~~~~~~liGySfGADvlP~~~n~L~ 348 (456)
T COG3946 318 FY--ARRWGAKRVLLIGYSFGADVLPFAYNRLP 348 (456)
T ss_pred HH--HHhhCcceEEEEeecccchhhHHHHHhCC
Confidence 98 77778899999999999977766555554
No 172
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=98.03 E-value=2.1e-05 Score=62.94 Aligned_cols=112 Identities=16% Similarity=0.076 Sum_probs=80.9
Q ss_pred EEEEEEcCCCCCCcCc------hHHHHHHHHhcCCEEEEeecCCCCCCCCC--C-------CCcCChhhHHHHHHHHHHH
Q 026555 38 ALIFICHGYAMECSIG------MNSTAIRLANEGYACYGIDYQGHGKSAGL--S-------GYIDNFDDLVDDCFNHFTS 102 (237)
Q Consensus 38 ~~iv~~hG~~~~~~~~------~~~~~~~l~~~g~~v~~~d~~g~G~s~~~--~-------~~~~~~~~~~~d~~~~~~~ 102 (237)
.+|++--|--++.+.+ +-++++.+ +.-++..++|-+|.|..- . -...+-++...|...++..
T Consensus 81 gPIffYtGNEGdie~Fa~ntGFm~D~Ap~~---~AllVFaEHRyYGeS~PFG~~s~k~~~hlgyLtseQALADfA~ll~~ 157 (492)
T KOG2183|consen 81 GPIFFYTGNEGDIEWFANNTGFMWDLAPEL---KALLVFAEHRYYGESLPFGSQSYKDARHLGYLTSEQALADFAELLTF 157 (492)
T ss_pred CceEEEeCCcccHHHHHhccchHHhhhHhh---CceEEEeehhccccCCCCcchhccChhhhccccHHHHHHHHHHHHHH
Confidence 5688888877766633 23444444 456899999999988731 1 0113557778899999999
Q ss_pred HHhhhhcCCceEEEEEeccchHHHHHHHhcCCCcccEEEEcCCcc-ccccc
Q 026555 103 ICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMC-KIAEN 152 (237)
Q Consensus 103 ~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~~~~vl~~~~~-~~~~~ 152 (237)
+++.......+|+.+|-|.||+++..+=.++|+.+.|.+..|.+. .+.+.
T Consensus 158 lK~~~~a~~~pvIafGGSYGGMLaAWfRlKYPHiv~GAlAaSAPvl~f~d~ 208 (492)
T KOG2183|consen 158 LKRDLSAEASPVIAFGGSYGGMLAAWFRLKYPHIVLGALAASAPVLYFEDT 208 (492)
T ss_pred HhhccccccCcEEEecCchhhHHHHHHHhcChhhhhhhhhccCceEeecCC
Confidence 955433456799999999999999999999999999877766554 44433
No 173
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=98.02 E-value=0.0001 Score=55.56 Aligned_cols=103 Identities=19% Similarity=0.192 Sum_probs=66.2
Q ss_pred CCcEEEEEEcCC--CCCCcCchHHHHHHHHhcCCEEEEeecCCCCCCCCCCCCcCChhhHHH----HHHHHHHHHHhhhh
Q 026555 35 EPKALIFICHGY--AMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDDLVD----DCFNHFTSICEKEE 108 (237)
Q Consensus 35 ~~~~~iv~~hG~--~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~----d~~~~~~~~~~~~~ 108 (237)
+|+.+|-|+-|. |......++.+.+.|+++||.|++.-+.- | .+-...++ ....+++.+.++..
T Consensus 15 ~P~gvihFiGGaf~ga~P~itYr~lLe~La~~Gy~ViAtPy~~-t---------fDH~~~A~~~~~~f~~~~~~L~~~~~ 84 (250)
T PF07082_consen 15 RPKGVIHFIGGAFVGAAPQITYRYLLERLADRGYAVIATPYVV-T---------FDHQAIAREVWERFERCLRALQKRGG 84 (250)
T ss_pred CCCEEEEEcCcceeccCcHHHHHHHHHHHHhCCcEEEEEecCC-C---------CcHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 678899999885 44444455999999999999999877631 1 12222223 33334444422111
Q ss_pred cC--CceEEEEEeccchHHHHHHHhcCCCcccEEEEcCCcc
Q 026555 109 NK--EKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMC 147 (237)
Q Consensus 109 ~~--~~~~~l~G~S~Gg~~a~~~a~~~p~~~~~~vl~~~~~ 147 (237)
.. .-+++-+|||+|+-+-+.+...++..-++-++++-..
T Consensus 85 ~~~~~lP~~~vGHSlGcklhlLi~s~~~~~r~gniliSFNN 125 (250)
T PF07082_consen 85 LDPAYLPVYGVGHSLGCKLHLLIGSLFDVERAGNILISFNN 125 (250)
T ss_pred CCcccCCeeeeecccchHHHHHHhhhccCcccceEEEecCC
Confidence 11 2378899999999888887777665556777776443
No 174
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=98.01 E-value=0.00017 Score=54.70 Aligned_cols=104 Identities=16% Similarity=0.174 Sum_probs=66.5
Q ss_pred EEEEEEcCCCCCCcC-chHHHHHHHHhc-CCEEEEeecCCCCCCCCCCCCcCChhhHHHHHHHHHHHHHhhhhcCCceEE
Q 026555 38 ALIFICHGYAMECSI-GMNSTAIRLANE-GYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEKEENKEKMRY 115 (237)
Q Consensus 38 ~~iv~~hG~~~~~~~-~~~~~~~~l~~~-g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 115 (237)
-++|++||++..+.. -+..+.+.+.++ |..|++.|. |-| ... .......+.++-+.+.+... ..-..-++
T Consensus 24 ~P~ii~HGigd~c~~~~~~~~~q~l~~~~g~~v~~lei-g~g--~~~-s~l~pl~~Qv~~~ce~v~~m----~~lsqGyn 95 (296)
T KOG2541|consen 24 VPVIVWHGIGDSCSSLSMANLTQLLEELPGSPVYCLEI-GDG--IKD-SSLMPLWEQVDVACEKVKQM----PELSQGYN 95 (296)
T ss_pred CCEEEEeccCcccccchHHHHHHHHHhCCCCeeEEEEe-cCC--cch-hhhccHHHHHHHHHHHHhcc----hhccCceE
Confidence 358899999988885 236777888776 788888886 344 111 11112333333333333322 11245699
Q ss_pred EEEeccchHHHHHHHhcCC-CcccEEEEcCCcccc
Q 026555 116 LLGESMGGAMVLLLHRKKP-DYFDGAVLVAPMCKI 149 (237)
Q Consensus 116 l~G~S~Gg~~a~~~a~~~p-~~~~~~vl~~~~~~~ 149 (237)
++|+|.||.++-.++..-+ ..++..|.++++-..
T Consensus 96 ivg~SQGglv~Raliq~cd~ppV~n~ISL~gPhaG 130 (296)
T KOG2541|consen 96 IVGYSQGGLVARALIQFCDNPPVKNFISLGGPHAG 130 (296)
T ss_pred EEEEccccHHHHHHHHhCCCCCcceeEeccCCcCC
Confidence 9999999999998887543 348888888766443
No 175
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.01 E-value=2.5e-05 Score=57.48 Aligned_cols=108 Identities=14% Similarity=0.068 Sum_probs=79.8
Q ss_pred cEEEEEEcCCCCCCc--CchHHHHHHHHhcCCEEEEeecCCCCCCCCCCCCcCChhhHHHHHHHHHHHHHhhhhcCCceE
Q 026555 37 KALIFICHGYAMECS--IGMNSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEKEENKEKMR 114 (237)
Q Consensus 37 ~~~iv~~hG~~~~~~--~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 114 (237)
+..|||+.|.+...- .|...+...|-+.+|.++-+.++.+-.- ....++++-++|+..+++++ ......+.+
T Consensus 36 ~~~vvfiGGLgdgLl~~~y~~~L~~~lde~~wslVq~q~~Ssy~G----~Gt~slk~D~edl~~l~~Hi--~~~~fSt~v 109 (299)
T KOG4840|consen 36 SVKVVFIGGLGDGLLICLYTTMLNRYLDENSWSLVQPQLRSSYNG----YGTFSLKDDVEDLKCLLEHI--QLCGFSTDV 109 (299)
T ss_pred EEEEEEEcccCCCccccccHHHHHHHHhhccceeeeeeccccccc----cccccccccHHHHHHHHHHh--hccCcccce
Confidence 467999999876543 3557889999999999999987643110 01136677789999999988 433344599
Q ss_pred EEEEeccchHHHHHHHhc--CCCcccEEEEcCCccccc
Q 026555 115 YLLGESMGGAMVLLLHRK--KPDYFDGAVLVAPMCKIA 150 (237)
Q Consensus 115 ~l~G~S~Gg~~a~~~a~~--~p~~~~~~vl~~~~~~~~ 150 (237)
+++|||.|..-.++|..+ .|..+.+.|+.+|..+..
T Consensus 110 VL~GhSTGcQdi~yYlTnt~~~r~iraaIlqApVSDrE 147 (299)
T KOG4840|consen 110 VLVGHSTGCQDIMYYLTNTTKDRKIRAAILQAPVSDRE 147 (299)
T ss_pred EEEecCccchHHHHHHHhccchHHHHHHHHhCccchhh
Confidence 999999999888777732 356788899999988765
No 176
>COG0627 Predicted esterase [General function prediction only]
Probab=97.93 E-value=7.7e-05 Score=59.14 Aligned_cols=113 Identities=18% Similarity=0.202 Sum_probs=72.7
Q ss_pred CCcEEEEEEcCCCCCCcCc--hHHHHHHHHhcCCEEEEeecC--------------CCCCCCC---CCC---C-cCChhh
Q 026555 35 EPKALIFICHGYAMECSIG--MNSTAIRLANEGYACYGIDYQ--------------GHGKSAG---LSG---Y-IDNFDD 91 (237)
Q Consensus 35 ~~~~~iv~~hG~~~~~~~~--~~~~~~~l~~~g~~v~~~d~~--------------g~G~s~~---~~~---~-~~~~~~ 91 (237)
.+-|+++++||..++...+ +..+-+...+.|..++++|-. |-+.|-- ... . .+.++.
T Consensus 52 ~~ipV~~~l~G~t~~~~~~~~~~g~~~~a~~~g~~~~~p~t~~~~~~~~~~vv~p~G~~~sfY~d~~~~~~~~~~~q~~t 131 (316)
T COG0627 52 RDIPVLYLLSGLTCNEPNVYLLDGLRRQADESGWAVVTPDTSPRGAGVNISVVMPLGGGASFYSDWTQPPWASGPYQWET 131 (316)
T ss_pred CCCCEEEEeCCCCCCCCceEeccchhhhhhhcCeEEecCCCCcccCCCCccccccCCCccceecccccCccccCccchhH
Confidence 4578999999998886433 235556666668888876322 2222210 000 0 133443
Q ss_pred H-HHHHHHHHHHHHhhhhcCC--ceEEEEEeccchHHHHHHHhcCCCcccEEEEcCCccccc
Q 026555 92 L-VDDCFNHFTSICEKEENKE--KMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKIA 150 (237)
Q Consensus 92 ~-~~d~~~~~~~~~~~~~~~~--~~~~l~G~S~Gg~~a~~~a~~~p~~~~~~vl~~~~~~~~ 150 (237)
+ ..++.+.++.. ..... .+..++||||||.=|+.+|.++|+++..+...++.....
T Consensus 132 fl~~ELP~~~~~~---f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd~f~~~sS~Sg~~~~s 190 (316)
T COG0627 132 FLTQELPALWEAA---FPADGTGDGRAIAGHSMGGYGALKLALKHPDRFKSASSFSGILSPS 190 (316)
T ss_pred HHHhhhhHHHHHh---cCcccccCCceeEEEeccchhhhhhhhhCcchhceecccccccccc
Confidence 3 33555444433 11111 278999999999999999999999999999998887765
No 177
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=97.91 E-value=6.4e-05 Score=56.53 Aligned_cols=114 Identities=19% Similarity=0.157 Sum_probs=48.2
Q ss_pred CcEEEEEEcCCCCCCcCc---hHHHHHHHHhcCCEEEEeecCCC-----CCCCC---------CCCCcCCh------hhH
Q 026555 36 PKALIFICHGYAMECSIG---MNSTAIRLANEGYACYGIDYQGH-----GKSAG---------LSGYIDNF------DDL 92 (237)
Q Consensus 36 ~~~~iv~~hG~~~~~~~~---~~~~~~~l~~~g~~v~~~d~~g~-----G~s~~---------~~~~~~~~------~~~ 92 (237)
.++.||+|||++.+...+ ...+.+.|.+.++.++.+|-|-- |.... .....++| ...
T Consensus 3 ~k~riLcLHG~~~na~if~~q~~~l~~~l~~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~ 82 (212)
T PF03959_consen 3 RKPRILCLHGYGQNAEIFRQQTSALRKALKKLDFEFVFVDGPHEVPPGPGIEPFSSEAESAFGDPGPFYSWWDPDDDDHE 82 (212)
T ss_dssp ---EEEEE--TT--HHHHHHHTHHHHHHHHHTT-EEEEE--SEE---GGG-SS---HHHHHHHHTT--EESS---S-SGG
T ss_pred CCceEEEeCCCCcCHHHHHHHHHHHHHHHhhCcEEEEEecCCcccCCcccccccccccccccCCCCcceeeeecCCCccc
Confidence 367799999999998865 13455666553688888875421 11100 00000000 011
Q ss_pred HHHHHHHHHHHHhhhhcCCceEEEEEeccchHHHHHHHhcC--------CCcccEEEEcCCcccc
Q 026555 93 VDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKK--------PDYFDGAVLVAPMCKI 149 (237)
Q Consensus 93 ~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~--------p~~~~~~vl~~~~~~~ 149 (237)
..++.+.++.+.+.-.....=.-|+|+|+||.+|..++... ...++-+|++|+....
T Consensus 83 ~~~~~~sl~~l~~~i~~~GPfdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~p~ 147 (212)
T PF03959_consen 83 YEGLDESLDYLRDYIEENGPFDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFPPP 147 (212)
T ss_dssp G---HHHHHHHHHHHHHH---SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES----E
T ss_pred ccCHHHHHHHHHHHHHhcCCeEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccCCC
Confidence 22222222222111111122356999999999998777531 2347888998876654
No 178
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.85 E-value=0.00052 Score=50.37 Aligned_cols=110 Identities=18% Similarity=0.237 Sum_probs=66.2
Q ss_pred CCcEEEEEEcCCCCCCc-Cch--------------HHHHHHHHhcCCEEEEeecCCCC---CCC-CCCCCcCChhhHHHH
Q 026555 35 EPKALIFICHGYAMECS-IGM--------------NSTAIRLANEGYACYGIDYQGHG---KSA-GLSGYIDNFDDLVDD 95 (237)
Q Consensus 35 ~~~~~iv~~hG~~~~~~-~~~--------------~~~~~~l~~~g~~v~~~d~~g~G---~s~-~~~~~~~~~~~~~~d 95 (237)
+++..+|++||-|.-.. .|. .++.++-.+.||.|++.+.-..- .+. .+... ...-++.
T Consensus 99 ~~~kLlVLIHGSGvVrAGQWARrLIIN~~Ld~GTQiPyi~rAv~~Gygviv~N~N~~~kfye~k~np~ky---irt~veh 175 (297)
T KOG3967|consen 99 NPQKLLVLIHGSGVVRAGQWARRLIINEDLDSGTQIPYIKRAVAEGYGVIVLNPNRERKFYEKKRNPQKY---IRTPVEH 175 (297)
T ss_pred CccceEEEEecCceEecchHhhhhhhccccccCCcChHHHHHHHcCCcEEEeCCchhhhhhhcccCcchh---ccchHHH
Confidence 45678999999874322 232 34556666789999988764211 110 11111 1122333
Q ss_pred HHHHHHHHHhhhhcCCceEEEEEeccchHHHHHHHhcCCC--cccEEEEcCCcccc
Q 026555 96 CFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPD--YFDGAVLVAPMCKI 149 (237)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~--~~~~~vl~~~~~~~ 149 (237)
..-+...+ -.....+.++++.||.||...+.+..++|+ +|-++.+-.++...
T Consensus 176 ~~yvw~~~--v~pa~~~sv~vvahsyGG~~t~~l~~~f~~d~~v~aialTDs~~~~ 229 (297)
T KOG3967|consen 176 AKYVWKNI--VLPAKAESVFVVAHSYGGSLTLDLVERFPDDESVFAIALTDSAMGS 229 (297)
T ss_pred HHHHHHHH--hcccCcceEEEEEeccCChhHHHHHHhcCCccceEEEEeecccccC
Confidence 33333333 122257899999999999999999999884 56666666555433
No 179
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=97.74 E-value=0.00039 Score=54.82 Aligned_cols=89 Identities=21% Similarity=0.212 Sum_probs=57.0
Q ss_pred HHHHHHHhcCCEEEEeecCCCCCCCCCCCCcCChhhHHHHHHHHHHHHHhhhh---c-CCceEEEEEeccchHHHHHHHh
Q 026555 56 STAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEKEE---N-KEKMRYLLGESMGGAMVLLLHR 131 (237)
Q Consensus 56 ~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~d~~~~~~~~~~~~~---~-~~~~~~l~G~S~Gg~~a~~~a~ 131 (237)
.+...+.++||.|+++|+.|.|..- ..-......+.+.++..++... . ...++.++|||.||.-++..+.
T Consensus 17 ~~l~~~L~~GyaVv~pDY~Glg~~y------~~~~~~a~avLD~vRAA~~~~~~~gl~~~~~v~l~GySqGG~Aa~~AA~ 90 (290)
T PF03583_consen 17 PFLAAWLARGYAVVAPDYEGLGTPY------LNGRSEAYAVLDAVRAARNLPPKLGLSPSSRVALWGYSQGGQAALWAAE 90 (290)
T ss_pred HHHHHHHHCCCEEEecCCCCCCCcc------cCcHhHHHHHHHHHHHHHhcccccCCCCCCCEEEEeeCccHHHHHHHHH
Confidence 4566677889999999999998721 1222334444444444422111 1 2468999999999988876654
Q ss_pred c----CCCc---ccEEEEcCCccccc
Q 026555 132 K----KPDY---FDGAVLVAPMCKIA 150 (237)
Q Consensus 132 ~----~p~~---~~~~vl~~~~~~~~ 150 (237)
. -||. +.+.+..+++.++.
T Consensus 91 l~~~YApeL~~~l~Gaa~gg~~~dl~ 116 (290)
T PF03583_consen 91 LAPSYAPELNRDLVGAAAGGPPADLA 116 (290)
T ss_pred HhHHhCcccccceeEEeccCCccCHH
Confidence 3 2443 67777777776654
No 180
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=97.65 E-value=0.00014 Score=51.64 Aligned_cols=58 Identities=16% Similarity=0.072 Sum_probs=39.8
Q ss_pred hhHHHHHHHHHHHHHhhhhcCCceEEEEEeccchHHHHHHHhcCCC----cccEEEEcCCcccc
Q 026555 90 DDLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPD----YFDGAVLVAPMCKI 149 (237)
Q Consensus 90 ~~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~----~~~~~vl~~~~~~~ 149 (237)
....+.+...++.. ....+..+++++|||+||.+|..++..... ....++..+++...
T Consensus 8 ~~~~~~i~~~~~~~--~~~~p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p~~~ 69 (153)
T cd00741 8 RSLANLVLPLLKSA--LAQYPDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPPRVG 69 (153)
T ss_pred HHHHHHHHHHHHHH--HHHCCCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCCccc
Confidence 34445555555554 233467899999999999999998876543 46667777766544
No 181
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=97.64 E-value=0.0024 Score=48.87 Aligned_cols=41 Identities=27% Similarity=0.413 Sum_probs=36.7
Q ss_pred CCceEEEEEeccchHHHHHHHhcCCCcccEEEEcCCccccc
Q 026555 110 KEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKIA 150 (237)
Q Consensus 110 ~~~~~~l~G~S~Gg~~a~~~a~~~p~~~~~~vl~~~~~~~~ 150 (237)
+.++-.++|||+||.+++.....+|+.+....++||+.-..
T Consensus 135 ~~~~~~i~GhSlGGLfvl~aLL~~p~~F~~y~~~SPSlWw~ 175 (264)
T COG2819 135 NSERTAIIGHSLGGLFVLFALLTYPDCFGRYGLISPSLWWH 175 (264)
T ss_pred CcccceeeeecchhHHHHHHHhcCcchhceeeeecchhhhC
Confidence 55679999999999999999999999999999999886554
No 182
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=97.62 E-value=0.00017 Score=61.00 Aligned_cols=91 Identities=14% Similarity=0.032 Sum_probs=60.9
Q ss_pred HHHHHHHHhcCCEEEEeecCCCCCCCCCC-CCcCChhhHHHHHHHHHHHHHhhhhcCCceEEEEEeccchHHHHHHHhcC
Q 026555 55 NSTAIRLANEGYACYGIDYQGHGKSAGLS-GYIDNFDDLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKK 133 (237)
Q Consensus 55 ~~~~~~l~~~g~~v~~~d~~g~G~s~~~~-~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~ 133 (237)
..+.+.|.+.||. --++.|-..-=+.. ......+++...++..|+.+ ....+.++++|+||||||.+++.+...-
T Consensus 159 ~kLIe~L~~iGY~--~~nL~gAPYDWRls~~~le~rd~YF~rLK~lIE~a--y~~nggkKVVLV~HSMGglv~lyFL~wv 234 (642)
T PLN02517 159 AVLIANLARIGYE--EKNMYMAAYDWRLSFQNTEVRDQTLSRLKSNIELM--VATNGGKKVVVVPHSMGVLYFLHFMKWV 234 (642)
T ss_pred HHHHHHHHHcCCC--CCceeecccccccCccchhhhhHHHHHHHHHHHHH--HHHcCCCeEEEEEeCCchHHHHHHHHhc
Confidence 7899999999995 23333222110000 00123366777888888877 4455678999999999999999987632
Q ss_pred C---------------CcccEEEEcCCcccc
Q 026555 134 P---------------DYFDGAVLVAPMCKI 149 (237)
Q Consensus 134 p---------------~~~~~~vl~~~~~~~ 149 (237)
. +.|++.|.++++...
T Consensus 235 ~~~~~~gG~gG~~W~dKyI~s~I~Iagp~lG 265 (642)
T PLN02517 235 EAPAPMGGGGGPGWCAKHIKAVMNIGGPFLG 265 (642)
T ss_pred cccccccCCcchHHHHHHHHHheecccccCC
Confidence 1 248899999877554
No 183
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=97.61 E-value=0.00011 Score=55.17 Aligned_cols=56 Identities=18% Similarity=0.221 Sum_probs=42.9
Q ss_pred HHHHHHHHHHhhhhcCCceEEEEEeccchHHHHHHHhcCCCcccEEEEcCCcccccc
Q 026555 95 DCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKIAE 151 (237)
Q Consensus 95 d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~~~~vl~~~~~~~~~ 151 (237)
-+.++++++.+....+.++|.|+|.|.||-+|+.+|..+| .|+++|.++|+.....
T Consensus 5 yfe~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~-~i~avVa~~ps~~~~~ 60 (213)
T PF08840_consen 5 YFEEAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFP-QISAVVAISPSSVVFQ 60 (213)
T ss_dssp HHHHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSS-SEEEEEEES--SB--S
T ss_pred HHHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCC-CccEEEEeCCceeEec
Confidence 4567788886666667789999999999999999999999 6999999988876653
No 184
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=97.53 E-value=0.0033 Score=52.38 Aligned_cols=137 Identities=17% Similarity=0.175 Sum_probs=81.6
Q ss_pred cceeEeecC--CcEEEEEEeecCCC-CCcEEEEEEcCCCCCCcCc--hHHHHH-------------HH-------HhcCC
Q 026555 12 DEEFILNSR--RVKLFTCSWIPQNQ-EPKALIFICHGYAMECSIG--MNSTAI-------------RL-------ANEGY 66 (237)
Q Consensus 12 ~~~~~~~~~--g~~l~~~~~~~~~~-~~~~~iv~~hG~~~~~~~~--~~~~~~-------------~l-------~~~g~ 66 (237)
...++...+ +..++|+.+..... ...|+|+++.|.++.+... +.+..+ .+ .+. .
T Consensus 38 ~sGy~~v~~~~~~~lfy~f~es~~~~~~~P~~lWlnGGPG~SS~~g~~~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~-a 116 (433)
T PLN03016 38 ETGYIGIGEDENVQFFYYFIKSENNPKEDPLLIWLNGGPGCSCLGGIIFENGPVGLKFEVFNGSAPSLFSTTYSWTKM-A 116 (433)
T ss_pred EEEEEEecCCCCeEEEEEEEecCCCcccCCEEEEEcCCCcHHHHHHHHHhcCCceeeccccCCCCCceeeCCCchhhc-C
Confidence 345554433 56788888765543 4569999999987765522 011111 11 111 6
Q ss_pred EEEEee-cCCCCCCCCCCCCc-CChhhHHHHHHHHHHHHHhh-hhcCCceEEEEEeccchHHHHHHHh----cC------
Q 026555 67 ACYGID-YQGHGKSAGLSGYI-DNFDDLVDDCFNHFTSICEK-EENKEKMRYLLGESMGGAMVLLLHR----KK------ 133 (237)
Q Consensus 67 ~v~~~d-~~g~G~s~~~~~~~-~~~~~~~~d~~~~~~~~~~~-~~~~~~~~~l~G~S~Gg~~a~~~a~----~~------ 133 (237)
+++.+| ..|.|.|....... .+-.+.++|+..+++...++ .+....++++.|.|.||..+-.+|. .+
T Consensus 117 nllfiDqPvGtGfSy~~~~~~~~~d~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~~i~~~n~~~~~~ 196 (433)
T PLN03016 117 NIIFLDQPVGSGFSYSKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEP 196 (433)
T ss_pred cEEEecCCCCCCccCCCCCCCccCCHHHHHHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHHHHHhhcccccCC
Confidence 788889 55999986432211 12223346777766665432 2224578999999999965544443 22
Q ss_pred CCcccEEEEcCCcccc
Q 026555 134 PDYFDGAVLVAPMCKI 149 (237)
Q Consensus 134 p~~~~~~vl~~~~~~~ 149 (237)
+-.++|+++-++....
T Consensus 197 ~inLkGi~iGNg~t~~ 212 (433)
T PLN03016 197 PINLQGYMLGNPVTYM 212 (433)
T ss_pred cccceeeEecCCCcCc
Confidence 1258899998887654
No 185
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=97.50 E-value=0.00037 Score=57.10 Aligned_cols=87 Identities=20% Similarity=0.190 Sum_probs=62.8
Q ss_pred chHHHHHHHHhcCCE----E--EEeecCCCCCCCCCCCCcCChhhHHHHHHHHHHHHHhhhhcCCceEEEEEeccchHHH
Q 026555 53 GMNSTAIRLANEGYA----C--YGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMV 126 (237)
Q Consensus 53 ~~~~~~~~l~~~g~~----v--~~~d~~g~G~s~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a 126 (237)
+|..+.+.|..-||. + ..+|+|= |.. .....+++...++..++.. .+..+.+++++++||||+.+.
T Consensus 125 ~w~~~i~~lv~~GYe~~~~l~ga~YDwRl---s~~---~~e~rd~yl~kLK~~iE~~--~~~~G~kkVvlisHSMG~l~~ 196 (473)
T KOG2369|consen 125 YWHELIENLVGIGYERGKTLFGAPYDWRL---SYH---NSEERDQYLSKLKKKIETM--YKLNGGKKVVLISHSMGGLYV 196 (473)
T ss_pred HHHHHHHHHHhhCcccCceeeccccchhh---ccC---ChhHHHHHHHHHHHHHHHH--HHHcCCCceEEEecCCccHHH
Confidence 346777888888886 2 4467761 110 1124577788899999888 666677999999999999999
Q ss_pred HHHHhcCCC--------cccEEEEcCCcc
Q 026555 127 LLLHRKKPD--------YFDGAVLVAPMC 147 (237)
Q Consensus 127 ~~~a~~~p~--------~~~~~vl~~~~~ 147 (237)
+.+...+++ .|++.+.++++.
T Consensus 197 lyFl~w~~~~~~~W~~k~I~sfvnig~p~ 225 (473)
T KOG2369|consen 197 LYFLKWVEAEGPAWCDKYIKSFVNIGAPW 225 (473)
T ss_pred HHHHhcccccchhHHHHHHHHHHccCchh
Confidence 999998877 266666665443
No 186
>PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B.
Probab=97.48 E-value=0.00034 Score=41.39 Aligned_cols=47 Identities=15% Similarity=0.135 Sum_probs=28.8
Q ss_pred cCccccceeEeecCCcEEEEEEeecCC-----CCCcEEEEEEcCCCCCCcCc
Q 026555 7 HNIKYDEEFILNSRRVKLFTCSWIPQN-----QEPKALIFICHGYAMECSIG 53 (237)
Q Consensus 7 ~~~~~~~~~~~~~~g~~l~~~~~~~~~-----~~~~~~iv~~hG~~~~~~~~ 53 (237)
.+++.++..+.+.||..|...+..+.. ...+|+|++.||+..++..|
T Consensus 8 ~GY~~E~h~V~T~DGYiL~l~RIp~~~~~~~~~~~k~pVll~HGL~~ss~~w 59 (63)
T PF04083_consen 8 HGYPCEEHEVTTEDGYILTLHRIPPGKNSSNQNKKKPPVLLQHGLLQSSDDW 59 (63)
T ss_dssp TT---EEEEEE-TTSEEEEEEEE-SBTTCTTTTTT--EEEEE--TT--GGGG
T ss_pred cCCCcEEEEEEeCCCcEEEEEEccCCCCCcccCCCCCcEEEECCcccChHHH
Confidence 467778889999999998887775443 24689999999999998877
No 187
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=97.39 E-value=0.0035 Score=51.85 Aligned_cols=115 Identities=12% Similarity=0.095 Sum_probs=80.6
Q ss_pred cEEEEEEcCCCCCCcCch----HHHHHHHHhcCCEEEEeecCCCCCCCCCCCC------cCChhhHHHHHHHHHHHHHhh
Q 026555 37 KALIFICHGYAMECSIGM----NSTAIRLANEGYACYGIDYQGHGKSAGLSGY------IDNFDDLVDDCFNHFTSICEK 106 (237)
Q Consensus 37 ~~~iv~~hG~~~~~~~~~----~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~------~~~~~~~~~d~~~~~~~~~~~ 106 (237)
.|+-++|-|=+.-...|. ..+...-.+.|..|+-.++|-+|.|...... ..+..+.+.|+..+|+.+..+
T Consensus 86 gPiFLmIGGEgp~~~~wv~~~~~~~~~~AkkfgA~v~~lEHRFYG~S~P~~~~st~nlk~LSs~QALaDla~fI~~~n~k 165 (514)
T KOG2182|consen 86 GPIFLMIGGEGPESDKWVGNENLTWLQWAKKFGATVFQLEHRFYGQSSPIGDLSTSNLKYLSSLQALADLAEFIKAMNAK 165 (514)
T ss_pred CceEEEEcCCCCCCCCccccCcchHHHHHHHhCCeeEEeeeeccccCCCCCCCcccchhhhhHHHHHHHHHHHHHHHHhh
Confidence 455556655443332231 1233334444888999999999987632211 135677899999999998544
Q ss_pred hhcCC-ceEEEEEeccchHHHHHHHhcCCCcccEEEEcCCcccccc
Q 026555 107 EENKE-KMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKIAE 151 (237)
Q Consensus 107 ~~~~~-~~~~l~G~S~Gg~~a~~~a~~~p~~~~~~vl~~~~~~~~~ 151 (237)
..... .+.+.+|-|.-|.++..+=+.+|+.+.|.|..|++....-
T Consensus 166 ~n~~~~~~WitFGgSYsGsLsAW~R~~yPel~~GsvASSapv~A~~ 211 (514)
T KOG2182|consen 166 FNFSDDSKWITFGGSYSGSLSAWFREKYPELTVGSVASSAPVLAKV 211 (514)
T ss_pred cCCCCCCCeEEECCCchhHHHHHHHHhCchhheeecccccceeEEe
Confidence 33323 4899999999999999999999999999999888776543
No 188
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=97.38 E-value=0.02 Score=41.58 Aligned_cols=112 Identities=13% Similarity=0.091 Sum_probs=70.0
Q ss_pred CCcEEEEEEcCCCCCCcCchHH-------HHHHHH----h--cCCEEEEeecCCCCCCCCC---CCCcCChhhHHHHHHH
Q 026555 35 EPKALIFICHGYAMECSIGMNS-------TAIRLA----N--EGYACYGIDYQGHGKSAGL---SGYIDNFDDLVDDCFN 98 (237)
Q Consensus 35 ~~~~~iv~~hG~~~~~~~~~~~-------~~~~l~----~--~g~~v~~~d~~g~G~s~~~---~~~~~~~~~~~~d~~~ 98 (237)
....+.++++|++.+....... +...+. . .+=.+-++-|.|+-..... ......-+.-+.+|..
T Consensus 17 ~A~~Vav~VPG~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~vAvV~WlgYdaP~~~~~~a~~~~~A~~ga~~L~~ 96 (177)
T PF06259_consen 17 TADHVAVLVPGTGTTLDSFLGGMDDEARALRAAAARAARAAGPGGSVAVVAWLGYDAPAGGLPDAASPGYARAGAPRLAR 96 (177)
T ss_pred CcCeeEEEcCCCCCCcccccchhHHHHHHHHHHHHHHHHhhcCCCCeEEEEEcCCCCCCCccccccCchHHHHHHHHHHH
Confidence 5677999999998877643211 111111 1 1224545555554322110 0000122445678888
Q ss_pred HHHHHHhhhhc-CCceEEEEEeccchHHHHHHHhcCCCcccEEEEcCCccc
Q 026555 99 HFTSICEKEEN-KEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCK 148 (237)
Q Consensus 99 ~~~~~~~~~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~~~~~~vl~~~~~~ 148 (237)
|++-+ +... ....+.++|||.|+.++-..+.+.+..++.+|+++++.-
T Consensus 97 f~~gl--~a~~~~~~~~tv~GHSYGS~v~G~A~~~~~~~vddvv~~GSPG~ 145 (177)
T PF06259_consen 97 FLDGL--RATHGPDAHLTVVGHSYGSTVVGLAAQQGGLRVDDVVLVGSPGM 145 (177)
T ss_pred HHHHh--hhhcCCCCCEEEEEecchhHHHHHHhhhCCCCcccEEEECCCCC
Confidence 88888 3333 566899999999999999998887778999999976643
No 189
>PLN02209 serine carboxypeptidase
Probab=97.32 E-value=0.0062 Score=50.86 Aligned_cols=129 Identities=19% Similarity=0.170 Sum_probs=78.8
Q ss_pred CcEEEEEEeecCCC-CCcEEEEEEcCCCCCCcCc--hHHHHH-------------HH-------HhcCCEEEEee-cCCC
Q 026555 21 RVKLFTCSWIPQNQ-EPKALIFICHGYAMECSIG--MNSTAI-------------RL-------ANEGYACYGID-YQGH 76 (237)
Q Consensus 21 g~~l~~~~~~~~~~-~~~~~iv~~hG~~~~~~~~--~~~~~~-------------~l-------~~~g~~v~~~d-~~g~ 76 (237)
+..+.|+.+..... ...|+|+++.|.++.+..+ +.+..+ .+ .+. .+++.+| ..|.
T Consensus 51 ~~~lf~~f~es~~~~~~~Pl~lWlnGGPG~SS~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~-anllfiDqPvGt 129 (437)
T PLN02209 51 NVQFFYYFIKSDKNPQEDPLIIWLNGGPGCSCLSGLFFENGPLALKNKVYNGSVPSLVSTTYSWTKT-ANIIFLDQPVGS 129 (437)
T ss_pred CeEEEEEEEecCCCCCCCCEEEEECCCCcHHHhhhHHHhcCCceeccCCCCCCcccceeCCCchhhc-CcEEEecCCCCC
Confidence 56788887765543 3469999999997766543 011000 11 122 5688888 5599
Q ss_pred CCCCCCCC-CcCChhhHHHHHHHHHHHHHhh-hhcCCceEEEEEeccchHHHHHHHh----cC------CCcccEEEEcC
Q 026555 77 GKSAGLSG-YIDNFDDLVDDCFNHFTSICEK-EENKEKMRYLLGESMGGAMVLLLHR----KK------PDYFDGAVLVA 144 (237)
Q Consensus 77 G~s~~~~~-~~~~~~~~~~d~~~~~~~~~~~-~~~~~~~~~l~G~S~Gg~~a~~~a~----~~------p~~~~~~vl~~ 144 (237)
|.|..... ...+.++.++|+..++....++ .+....++++.|.|.||.-+-.+|. .+ +-.++|+++.+
T Consensus 130 GfSy~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~i~~~~~~~~~~~inl~Gi~ign 209 (437)
T PLN02209 130 GFSYSKTPIERTSDTSEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEISKGNYICCNPPINLQGYVLGN 209 (437)
T ss_pred CccCCCCCCCccCCHHHHHHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHHHHhhcccccCCceeeeeEEecC
Confidence 98864322 1123334467777777766432 2233468999999999965444432 22 12478999988
Q ss_pred Cccccc
Q 026555 145 PMCKIA 150 (237)
Q Consensus 145 ~~~~~~ 150 (237)
+..+..
T Consensus 210 g~td~~ 215 (437)
T PLN02209 210 PITHIE 215 (437)
T ss_pred cccChh
Confidence 877653
No 190
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=97.15 E-value=0.0034 Score=48.78 Aligned_cols=112 Identities=17% Similarity=0.178 Sum_probs=62.9
Q ss_pred CCcEEEEEEcCCCCCCcCchHHHHHHHHhcC----CEEEEeecCCCCCCCCCCCCcCChhh----HHHHHHHHHHHHHhh
Q 026555 35 EPKALIFICHGYAMECSIGMNSTAIRLANEG----YACYGIDYQGHGKSAGLSGYIDNFDD----LVDDCFNHFTSICEK 106 (237)
Q Consensus 35 ~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g----~~v~~~d~~g~G~s~~~~~~~~~~~~----~~~d~~~~~~~~~~~ 106 (237)
.+.|++++.||-.-....-+..+.+.+...| -.++.+|.-. ...........+. +++++.=.++..-.
T Consensus 96 ~k~pvl~~~DG~~~~~~g~i~~~~dsli~~g~i~pai~vgid~~d---~~~R~~~~~~n~~~~~~L~~eLlP~v~~~yp- 171 (299)
T COG2382 96 EKYPVLYLQDGQDWFRSGRIPRILDSLIAAGEIPPAILVGIDYID---VKKRREELHCNEAYWRFLAQELLPYVEERYP- 171 (299)
T ss_pred ccccEEEEeccHHHHhcCChHHHHHHHHHcCCCCCceEEecCCCC---HHHHHHHhcccHHHHHHHHHHhhhhhhccCc-
Confidence 4579999999843221111123445555543 3455555422 1111111112222 22333333332200
Q ss_pred hhcCCceEEEEEeccchHHHHHHHhcCCCcccEEEEcCCccccc
Q 026555 107 EENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKIA 150 (237)
Q Consensus 107 ~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~~~~vl~~~~~~~~ 150 (237)
.......-++.|.|+||.+++..+.++|+.+-.++..||.....
T Consensus 172 ~~~~a~~r~L~G~SlGG~vsL~agl~~Pe~FG~V~s~Sps~~~~ 215 (299)
T COG2382 172 TSADADGRVLAGDSLGGLVSLYAGLRHPERFGHVLSQSGSFWWT 215 (299)
T ss_pred ccccCCCcEEeccccccHHHHHHHhcCchhhceeeccCCccccC
Confidence 01123457899999999999999999999999999998887664
No 191
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=97.14 E-value=0.0019 Score=49.12 Aligned_cols=58 Identities=17% Similarity=0.226 Sum_probs=36.2
Q ss_pred ChhhHHHHHHHHHHHHHhhhhcCCceEEEEEeccchHHHHHHHhcC-----CCcccEEEEcCCcc
Q 026555 88 NFDDLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKK-----PDYFDGAVLVAPMC 147 (237)
Q Consensus 88 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~-----p~~~~~~vl~~~~~ 147 (237)
.+....+++...+..+ ..+.+..++++.|||+||.+|..++... +..+..+..-+|..
T Consensus 106 ~~~~~~~~~~~~~~~~--~~~~p~~~i~vtGHSLGGaiA~l~a~~l~~~~~~~~i~~~tFg~P~v 168 (229)
T cd00519 106 AYKSLYNQVLPELKSA--LKQYPDYKIIVTGHSLGGALASLLALDLRLRGPGSDVTVYTFGQPRV 168 (229)
T ss_pred HHHHHHHHHHHHHHHH--HhhCCCceEEEEccCHHHHHHHHHHHHHHhhCCCCceEEEEeCCCCC
Confidence 3444455555555555 3334567999999999999998877642 23355444444444
No 192
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=97.13 E-value=0.0037 Score=45.65 Aligned_cols=106 Identities=17% Similarity=0.109 Sum_probs=58.5
Q ss_pred EEEEEcCCCCCCcC--chHHHHHHHHhc-C---CEEEEeecCCCCCCCCCCCCcCChhhHHHHHHHHHHHHHhhhhcCCc
Q 026555 39 LIFICHGYAMECSI--GMNSTAIRLANE-G---YACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEKEENKEK 112 (237)
Q Consensus 39 ~iv~~hG~~~~~~~--~~~~~~~~l~~~-g---~~v~~~d~~g~G~s~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 112 (237)
.||+..|.++.... .-..+.+.+.+. | ..+..+++|-.... .....+...-++++.+.++.. ..+....
T Consensus 7 ~vi~aRGT~E~~g~~~~g~~~~~~l~~~~g~~~~~~~~V~YpA~~~~---~~y~~S~~~G~~~~~~~i~~~--~~~CP~~ 81 (179)
T PF01083_consen 7 HVIFARGTGEPPGVGRVGPPFADALQAQPGGTSVAVQGVEYPASLGP---NSYGDSVAAGVANLVRLIEEY--AARCPNT 81 (179)
T ss_dssp EEEEE--TTSSTTTCCCHHHHHHHHHHHCTTCEEEEEE--S---SCG---GSCHHHHHHHHHHHHHHHHHH--HHHSTTS
T ss_pred EEEEecCCCCCCCCccccHHHHHHHHhhcCCCeeEEEecCCCCCCCc---ccccccHHHHHHHHHHHHHHH--HHhCCCC
Confidence 46666676654332 112344455433 3 33444555532211 111123444466666666665 3444677
Q ss_pred eEEEEEeccchHHHHHHHhc--C----CCcccEEEEcCCcccc
Q 026555 113 MRYLLGESMGGAMVLLLHRK--K----PDYFDGAVLVAPMCKI 149 (237)
Q Consensus 113 ~~~l~G~S~Gg~~a~~~a~~--~----p~~~~~~vl~~~~~~~ 149 (237)
+++|+|||+|+.++..++.. . .++|.++++++-+...
T Consensus 82 kivl~GYSQGA~V~~~~~~~~~l~~~~~~~I~avvlfGdP~~~ 124 (179)
T PF01083_consen 82 KIVLAGYSQGAMVVGDALSGDGLPPDVADRIAAVVLFGDPRRG 124 (179)
T ss_dssp EEEEEEETHHHHHHHHHHHHTTSSHHHHHHEEEEEEES-TTTB
T ss_pred CEEEEecccccHHHHHHHHhccCChhhhhhEEEEEEecCCccc
Confidence 99999999999999998876 2 3569999998766554
No 193
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=97.06 E-value=0.0015 Score=45.44 Aligned_cols=38 Identities=21% Similarity=0.357 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHHhhhhcCCceEEEEEeccchHHHHHHHhc
Q 026555 93 VDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRK 132 (237)
Q Consensus 93 ~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~ 132 (237)
.+.+.+.++.+ ..+....++++.|||+||.+|..++..
T Consensus 47 ~~~~~~~l~~~--~~~~~~~~i~itGHSLGGalA~l~a~~ 84 (140)
T PF01764_consen 47 YDQILDALKEL--VEKYPDYSIVITGHSLGGALASLAAAD 84 (140)
T ss_dssp HHHHHHHHHHH--HHHSTTSEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH--HhcccCccchhhccchHHHHHHHHHHh
Confidence 33444444444 233345799999999999999877764
No 194
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=97.05 E-value=0.055 Score=45.24 Aligned_cols=139 Identities=21% Similarity=0.232 Sum_probs=88.3
Q ss_pred ccccceeEeec--CCcEEEEEEeecCCC-CCcEEEEEEcCCCCCCcCchHHHHHHHHhcC--------------------
Q 026555 9 IKYDEEFILNS--RRVKLFTCSWIPQNQ-EPKALIFICHGYAMECSIGMNSTAIRLANEG-------------------- 65 (237)
Q Consensus 9 ~~~~~~~~~~~--~g~~l~~~~~~~~~~-~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g-------------------- 65 (237)
+.....++... .+..++|+.+..+.. ..+|.||++.|.++-+... ..|.+.|
T Consensus 42 f~~ysGYv~v~~~~~~~LFYwf~eS~~~P~~dPlvLWLnGGPGCSSl~-----G~~~E~GPf~v~~~G~tL~~N~ySWnk 116 (454)
T KOG1282|consen 42 FKQYSGYVTVNESEGRQLFYWFFESENNPETDPLVLWLNGGPGCSSLG-----GLFEENGPFRVKYNGKTLYLNPYSWNK 116 (454)
T ss_pred cccccceEECCCCCCceEEEEEEEccCCCCCCCEEEEeCCCCCccchh-----hhhhhcCCeEEcCCCCcceeCCccccc
Confidence 34445566544 588999999976543 3478999999987654421 1111111
Q ss_pred -CEEEEeecC-CCCCCCCCCC--CcCChhhHHHHHHHHHHHHHhh-hhcCCceEEEEEeccchHHHHHHH----hcCC--
Q 026555 66 -YACYGIDYQ-GHGKSAGLSG--YIDNFDDLVDDCFNHFTSICEK-EENKEKMRYLLGESMGGAMVLLLH----RKKP-- 134 (237)
Q Consensus 66 -~~v~~~d~~-g~G~s~~~~~--~~~~~~~~~~d~~~~~~~~~~~-~~~~~~~~~l~G~S~Gg~~a~~~a----~~~p-- 134 (237)
.+++..|.| |.|.|-.... ...+.+..++|.-.++....++ .+....+++|.|.|.+|...-.+| ..+.
T Consensus 117 ~aNiLfLd~PvGvGFSYs~~~~~~~~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~~I~~~N~~~ 196 (454)
T KOG1282|consen 117 EANILFLDQPVGVGFSYSNTSSDYKTGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQEILKGNKKC 196 (454)
T ss_pred cccEEEEecCCcCCccccCCCCcCcCCcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHHHHHhccccc
Confidence 457777776 8888764322 1235566677877777665443 344567999999999995444443 3331
Q ss_pred ----CcccEEEEcCCccccccc
Q 026555 135 ----DYFDGAVLVAPMCKIAEN 152 (237)
Q Consensus 135 ----~~~~~~vl~~~~~~~~~~ 152 (237)
-.++|+++=+|..+....
T Consensus 197 ~~~~iNLkG~~IGNg~td~~~~ 218 (454)
T KOG1282|consen 197 CKPNINLKGYAIGNGLTDPEID 218 (454)
T ss_pred cCCcccceEEEecCcccCcccc
Confidence 358899988888776543
No 195
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=97.03 E-value=0.0026 Score=48.13 Aligned_cols=39 Identities=15% Similarity=0.079 Sum_probs=30.8
Q ss_pred CceEEEEEeccchHHHHHHHhcC----CCcccEEEEcCCcccc
Q 026555 111 EKMRYLLGESMGGAMVLLLHRKK----PDYFDGAVLVAPMCKI 149 (237)
Q Consensus 111 ~~~~~l~G~S~Gg~~a~~~a~~~----p~~~~~~vl~~~~~~~ 149 (237)
.+++.+.|||.||++|...+... .++|.++...+++...
T Consensus 83 ~~~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDgPGf~ 125 (224)
T PF11187_consen 83 PGKIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDGPGFS 125 (224)
T ss_pred CCCEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeCCCCC
Confidence 34699999999999999998863 3578888887765433
No 196
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=96.74 E-value=0.003 Score=46.80 Aligned_cols=76 Identities=18% Similarity=0.159 Sum_probs=47.6
Q ss_pred HHHHHHHhcCCEEEEeecCCCCCCC----CCCCCcCChhhHHHHHHHHHHHHHhhhhcCCceEEEEEeccchHHHHHHHh
Q 026555 56 STAIRLANEGYACYGIDYQGHGKSA----GLSGYIDNFDDLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHR 131 (237)
Q Consensus 56 ~~~~~l~~~g~~v~~~d~~g~G~s~----~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~ 131 (237)
..+..|... .+|++|-+|=-.... .........+--..|+.++.++.++ ..++.++++|+|||.|+.+...+++
T Consensus 37 ~qas~F~~~-~~vfAP~YRQatl~~~~~~~~~~~~~a~~~ay~DV~~AF~~yL~-~~n~GRPfILaGHSQGs~~l~~LL~ 114 (207)
T PF11288_consen 37 NQASAFNGV-CNVFAPRYRQATLYAFLDTDREDAEKAFDLAYSDVRAAFDYYLA-NYNNGRPFILAGHSQGSMHLLRLLK 114 (207)
T ss_pred HHhhhhhcC-CccccChhhcchhhhhhccCcchhHHHHHhhHHHHHHHHHHHHH-hcCCCCCEEEEEeChHHHHHHHHHH
Confidence 344555444 688888877432111 0011111233335688888877753 3345689999999999999999988
Q ss_pred cC
Q 026555 132 KK 133 (237)
Q Consensus 132 ~~ 133 (237)
+.
T Consensus 115 e~ 116 (207)
T PF11288_consen 115 EE 116 (207)
T ss_pred HH
Confidence 64
No 197
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=96.60 E-value=0.024 Score=42.21 Aligned_cols=107 Identities=18% Similarity=0.030 Sum_probs=58.7
Q ss_pred CcEEEEEEcCCCCCCcCch---HHHHHHHHhcCCEEEEeecCC----CCCCCCCC-----CC------cC----------
Q 026555 36 PKALIFICHGYAMECSIGM---NSTAIRLANEGYACYGIDYQG----HGKSAGLS-----GY------ID---------- 87 (237)
Q Consensus 36 ~~~~iv~~hG~~~~~~~~~---~~~~~~l~~~g~~v~~~d~~g----~G~s~~~~-----~~------~~---------- 87 (237)
.++-|++|||+..+...+- ..+.+.+.+. +..+.+|-|- -+.+.... .. .+
T Consensus 4 ~k~rvLcLHGfrQsg~~F~~Ktg~~rK~l~k~-~el~f~~aPh~~~~~~~~~~~~~~~~~a~~~~~~~~~~Wf~~n~~~~ 82 (230)
T KOG2551|consen 4 KKLRVLCLHGFRQSGKVFSEKTGSLRKLLKKL-AELVFPDAPHELPKADLPDSEREKKFDAPPDVEQNRYGWFSNNEASF 82 (230)
T ss_pred CCceEEEecchhhccHHHHHHhhhHHHHHHhh-heEEecCCCccCCcccCCcccccccccCCcccccchhhhhccccccc
Confidence 3567999999998888551 2455666665 7777777662 11111000 00 00
Q ss_pred -ChhhHHHHHHHHHHHHHhhhhcCCceEE-EEEeccchHHHHHHHhc---------CCCcccEEEEcCCcccc
Q 026555 88 -NFDDLVDDCFNHFTSICEKEENKEKMRY-LLGESMGGAMVLLLHRK---------KPDYFDGAVLVAPMCKI 149 (237)
Q Consensus 88 -~~~~~~~d~~~~~~~~~~~~~~~~~~~~-l~G~S~Gg~~a~~~a~~---------~p~~~~~~vl~~~~~~~ 149 (237)
.....-+-+..+.+++. ...|+. |+|+|.|+.++..++.. .| .++-+|++|+....
T Consensus 83 ~~~~~~eesl~yl~~~i~-----enGPFDGllGFSQGA~laa~l~~~~~~~~~~~~~P-~~kF~v~~SGf~~~ 149 (230)
T KOG2551|consen 83 TEYFGFEESLEYLEDYIK-----ENGPFDGLLGFSQGAALAALLAGLGQKGLPYVKQP-PFKFAVFISGFKFP 149 (230)
T ss_pred ccccChHHHHHHHHHHHH-----HhCCCccccccchhHHHHHHhhcccccCCcccCCC-CeEEEEEEecCCCC
Confidence 00111111333333331 234554 99999999999888872 12 25777777765443
No 198
>COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism]
Probab=96.56 E-value=0.019 Score=44.53 Aligned_cols=111 Identities=14% Similarity=0.129 Sum_probs=80.5
Q ss_pred cCCCCCcEEEEEEcCCCCCCcCchHHHHHHHHhcCCEEEEeecCCCCCCCCCCCCcCChhhHHHHHHHHHHHHHhhhhcC
Q 026555 31 PQNQEPKALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEKEENK 110 (237)
Q Consensus 31 ~~~~~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 110 (237)
+....+.|.|+++-.+.++.....+...+.|... ..|++-||-.--.-+-..+. .+++++++-+.++++.+ +
T Consensus 97 ~~~r~pdPkvLivapmsGH~aTLLR~TV~alLp~-~~vyitDW~dAr~Vp~~~G~-FdldDYIdyvie~~~~~------G 168 (415)
T COG4553 97 PDARKPDPKVLIVAPMSGHYATLLRGTVEALLPY-HDVYITDWVDARMVPLEAGH-FDLDDYIDYVIEMINFL------G 168 (415)
T ss_pred ccccCCCCeEEEEecccccHHHHHHHHHHHhccc-cceeEeeccccceeecccCC-ccHHHHHHHHHHHHHHh------C
Confidence 3334567899999999998877767778888765 77999998754433322222 68999999999999998 4
Q ss_pred CceEEEEEeccch-----HHHHHHHhcCCCcccEEEEcCCccccc
Q 026555 111 EKMRYLLGESMGG-----AMVLLLHRKKPDYFDGAVLVAPMCKIA 150 (237)
Q Consensus 111 ~~~~~l~G~S~Gg-----~~a~~~a~~~p~~~~~~vl~~~~~~~~ 150 (237)
. .+++++-+.=+ .++++-+...|.....+++.+++.+.-
T Consensus 169 p-~~hv~aVCQP~vPvLAAisLM~~~~~p~~PssMtlmGgPIDaR 212 (415)
T COG4553 169 P-DAHVMAVCQPTVPVLAAISLMEEDGDPNVPSSMTLMGGPIDAR 212 (415)
T ss_pred C-CCcEEEEecCCchHHHHHHHHHhcCCCCCCceeeeecCccccc
Confidence 4 47777777544 444555556777888999999887753
No 199
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=96.53 E-value=0.018 Score=49.71 Aligned_cols=126 Identities=19% Similarity=0.159 Sum_probs=69.9
Q ss_pred EEEEEEeecCCCCC--cEEEEEEcCCCCCCcC---c-hHHHHHHHHhcCCEEEEeecC----CCCCCCCCCCCcCChhhH
Q 026555 23 KLFTCSWIPQNQEP--KALIFICHGYAMECSI---G-MNSTAIRLANEGYACYGIDYQ----GHGKSAGLSGYIDNFDDL 92 (237)
Q Consensus 23 ~l~~~~~~~~~~~~--~~~iv~~hG~~~~~~~---~-~~~~~~~l~~~g~~v~~~d~~----g~G~s~~~~~~~~~~~~~ 92 (237)
.+..-.|.|..... .|++|++||.+-.... + .......+......|+.+.+| |+..+..... ..++ -
T Consensus 96 CLylNV~tp~~~~~~~~pV~V~iHGG~~~~gs~~~~~~~~~~~~~~~~~VVvVt~~YRLG~lGF~st~d~~~-~gN~--g 172 (545)
T KOG1516|consen 96 CLYLNVYTPQGCSESKLPVMVYIHGGGFQFGSASSFEIISPAYVLLLKDVVVVTINYRLGPLGFLSTGDSAA-PGNL--G 172 (545)
T ss_pred CceEEEeccCCCccCCCCEEEEEeCCceeeccccchhhcCchhccccCCEEEEEecccceeceeeecCCCCC-CCcc--c
Confidence 34455556664322 7999999997643332 1 011122222224556777766 3322221111 0111 1
Q ss_pred HHHHHHHHHHHHh---hhhcCCceEEEEEeccchHHHHHHHhc--CCCcccEEEEcCCcccccc
Q 026555 93 VDDCFNHFTSICE---KEENKEKMRYLLGESMGGAMVLLLHRK--KPDYFDGAVLVAPMCKIAE 151 (237)
Q Consensus 93 ~~d~~~~~~~~~~---~~~~~~~~~~l~G~S~Gg~~a~~~a~~--~p~~~~~~vl~~~~~~~~~ 151 (237)
..|+..+++++.+ ....+.++|.++|||.||..+..+... ...+++++|..++......
T Consensus 173 l~Dq~~AL~wv~~~I~~FGGdp~~vTl~G~saGa~~v~~l~~Sp~s~~LF~~aI~~SG~~~~~~ 236 (545)
T KOG1516|consen 173 LFDQLLALRWVKDNIPSFGGDPKNVTLFGHSAGAASVSLLTLSPHSRGLFHKAISMSGNALSPW 236 (545)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCeEEEEeechhHHHHHHHhcCHhhHHHHHHHHhhccccccch
Confidence 3366677776632 234467899999999999888766542 2255777777766654443
No 200
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=96.48 E-value=0.06 Score=45.61 Aligned_cols=130 Identities=25% Similarity=0.350 Sum_probs=78.2
Q ss_pred eecCCc--EEEEEEeecCCCCCcEEEEEEcCCCCCCcCchHH----HHHHHHhcCCEEEEeecCCCCCCCC--CCCCcCC
Q 026555 17 LNSRRV--KLFTCSWIPQNQEPKALIFICHGYAMECSIGMNS----TAIRLANEGYACYGIDYQGHGKSAG--LSGYIDN 88 (237)
Q Consensus 17 ~~~~g~--~l~~~~~~~~~~~~~~~iv~~hG~~~~~~~~~~~----~~~~l~~~g~~v~~~d~~g~G~s~~--~~~~~~~ 88 (237)
...++. .|.+..|.|..=+.+ .+.+-|.|-........ +...+ ..||.++.=|- ||..+.. ....-.+
T Consensus 8 ~~~~~~~~~i~fev~LP~~WNgR--~~~~GgGG~~G~i~~~~~~~~~~~~~-~~G~A~~~TD~-Gh~~~~~~~~~~~~~n 83 (474)
T PF07519_consen 8 HPSDGSAPNIRFEVWLPDNWNGR--FLQVGGGGFAGGINYADGKASMATAL-ARGYATASTDS-GHQGSAGSDDASFGNN 83 (474)
T ss_pred ecCCCCcceEEEEEECChhhccC--eEEECCCeeeCcccccccccccchhh-hcCeEEEEecC-CCCCCcccccccccCC
Confidence 344555 899999999831222 55555544333322122 34444 56999999996 7765532 1111012
Q ss_pred hhhH-------HHHHHHHHHHHHhh-hhcCCceEEEEEeccchHHHHHHHhcCCCcccEEEEcCCccccc
Q 026555 89 FDDL-------VDDCFNHFTSICEK-EENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKIA 150 (237)
Q Consensus 89 ~~~~-------~~d~~~~~~~~~~~-~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~~~~vl~~~~~~~~ 150 (237)
.+.+ +.+...+-+.+.+. -....+.-+..|-|.||.-++..|.++|+.++|++.-+|...+.
T Consensus 84 ~~~~~dfa~ra~h~~~~~aK~l~~~~Yg~~p~~sY~~GcS~GGRqgl~~AQryP~dfDGIlAgaPA~~~~ 153 (474)
T PF07519_consen 84 PEALLDFAYRALHETTVVAKALIEAFYGKAPKYSYFSGCSTGGRQGLMAAQRYPEDFDGILAGAPAINWT 153 (474)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCceEEEEeCCCcchHHHHHHhChhhcCeEEeCCchHHHH
Confidence 2111 12222222222221 12245678999999999999999999999999999999987654
No 201
>PLN02162 triacylglycerol lipase
Probab=96.35 E-value=0.01 Score=49.18 Aligned_cols=22 Identities=36% Similarity=0.522 Sum_probs=19.2
Q ss_pred CCceEEEEEeccchHHHHHHHh
Q 026555 110 KEKMRYLLGESMGGAMVLLLHR 131 (237)
Q Consensus 110 ~~~~~~l~G~S~Gg~~a~~~a~ 131 (237)
...++++.|||+||.+|..++.
T Consensus 276 p~~kliVTGHSLGGALAtLaAa 297 (475)
T PLN02162 276 KNLKYILTGHSLGGALAALFPA 297 (475)
T ss_pred CCceEEEEecChHHHHHHHHHH
Confidence 5678999999999999998754
No 202
>PLN02310 triacylglycerol lipase
Probab=96.30 E-value=0.012 Score=48.18 Aligned_cols=40 Identities=20% Similarity=0.300 Sum_probs=25.5
Q ss_pred hHHHHHHHHHHHHHhhhhcCCceEEEEEeccchHHHHHHHhc
Q 026555 91 DLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRK 132 (237)
Q Consensus 91 ~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~ 132 (237)
+..+.+..+++.. .......++.+.|||+||.+|+..|..
T Consensus 190 qVl~eV~~L~~~y--~~~~e~~sI~vTGHSLGGALAtLaA~d 229 (405)
T PLN02310 190 QVMQEVKRLVNFY--RGKGEEVSLTVTGHSLGGALALLNAYE 229 (405)
T ss_pred HHHHHHHHHHHhh--cccCCcceEEEEcccHHHHHHHHHHHH
Confidence 3344444444433 112234589999999999999988753
No 203
>PLN00413 triacylglycerol lipase
Probab=96.27 E-value=0.011 Score=49.02 Aligned_cols=22 Identities=32% Similarity=0.522 Sum_probs=19.6
Q ss_pred CCceEEEEEeccchHHHHHHHh
Q 026555 110 KEKMRYLLGESMGGAMVLLLHR 131 (237)
Q Consensus 110 ~~~~~~l~G~S~Gg~~a~~~a~ 131 (237)
+..++++.|||+||.+|..++.
T Consensus 282 p~~kliVTGHSLGGALAtLaA~ 303 (479)
T PLN00413 282 PTSKFILSGHSLGGALAILFTA 303 (479)
T ss_pred CCCeEEEEecCHHHHHHHHHHH
Confidence 6678999999999999998874
No 204
>PF06441 EHN: Epoxide hydrolase N terminus; InterPro: IPR010497 This entry represents the N-terminal region of the eukaryotic epoxide hydrolase protein. Epoxide hydrolases (3.3.2.3 from EC) comprise a group of functionally related enzymes that catalyse the addition of water to oxirane compounds (epoxides), thereby usually generating vicinal trans-diols. EHs have been found in all types of living organisms, including mammals, invertebrates, plants, fungi and bacteria. In animals, the major interest in EH is directed towards their detoxification capacity for epoxides since they are important safeguards against the cytotoxic and genotoxic potential of oxirane derivatives that are often reactive electrophiles because of the high tension of the three-membered ring system and the strong polarisation of the C--O bonds. This is of significant relevance because epoxides are frequent intermediary metabolites, which arise during the biotransformation of foreign compounds []. This domain is often found in conjunction with IPR000073 from INTERPRO.; GO: 0004301 epoxide hydrolase activity, 0009636 response to toxin, 0016020 membrane; PDB: 3G0I_B 3G02_A 1QO7_A.
Probab=96.16 E-value=0.018 Score=38.42 Aligned_cols=44 Identities=7% Similarity=0.012 Sum_probs=26.1
Q ss_pred ccccceeEeecCCcEEEEEEeecCCCCCcEEEEEEcCCCCCCcCc
Q 026555 9 IKYDEEFILNSRRVKLFTCSWIPQNQEPKALIFICHGYAMECSIG 53 (237)
Q Consensus 9 ~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~iv~~hG~~~~~~~~ 53 (237)
++.-..+.+..+|..|++....+.. ...-+|||+||++++--.+
T Consensus 65 lN~~phf~t~I~g~~iHFih~rs~~-~~aiPLll~HGWPgSf~Ef 108 (112)
T PF06441_consen 65 LNSFPHFKTEIDGLDIHFIHVRSKR-PNAIPLLLLHGWPGSFLEF 108 (112)
T ss_dssp HTTS-EEEEEETTEEEEEEEE--S--TT-EEEEEE--SS--GGGG
T ss_pred HHcCCCeeEEEeeEEEEEEEeeCCC-CCCeEEEEECCCCccHHhH
Confidence 3433455667789999999987754 4567899999999986544
No 205
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=96.10 E-value=0.027 Score=45.92 Aligned_cols=108 Identities=17% Similarity=0.106 Sum_probs=82.3
Q ss_pred CCcEEEEEEcCCCCCCcCchHHHHHHHHhcCCEEEEeecCCCCCCCCCCCC--cCChhhHHHHHHHHHHHHHhhhhcCCc
Q 026555 35 EPKALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSGY--IDNFDDLVDDCFNHFTSICEKEENKEK 112 (237)
Q Consensus 35 ~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~--~~~~~~~~~d~~~~~~~~~~~~~~~~~ 112 (237)
..+|+|+..-|++.+......+....| +-+-+.+++|-++.|.....+ .-++.+-+.|..++++.+ +.- -.+
T Consensus 61 ~drPtV~~T~GY~~~~~p~r~Ept~Ll---d~NQl~vEhRfF~~SrP~p~DW~~Lti~QAA~D~Hri~~A~--K~i-Y~~ 134 (448)
T PF05576_consen 61 FDRPTVLYTEGYNVSTSPRRSEPTQLL---DGNQLSVEHRFFGPSRPEPADWSYLTIWQAASDQHRIVQAF--KPI-YPG 134 (448)
T ss_pred CCCCeEEEecCcccccCccccchhHhh---ccceEEEEEeeccCCCCCCCCcccccHhHhhHHHHHHHHHH--Hhh-ccC
Confidence 457889999999887654424554555 345799999999999754322 247888899999999988 332 356
Q ss_pred eEEEEEeccchHHHHHHHhcCCCcccEEEEcCCccc
Q 026555 113 MRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCK 148 (237)
Q Consensus 113 ~~~l~G~S~Gg~~a~~~a~~~p~~~~~~vl~~~~~~ 148 (237)
+-+--|-|-||+.++.+=.-+|+.+++.|..-.+.+
T Consensus 135 kWISTG~SKGGmTa~y~rrFyP~DVD~tVaYVAP~~ 170 (448)
T PF05576_consen 135 KWISTGGSKGGMTAVYYRRFYPDDVDGTVAYVAPND 170 (448)
T ss_pred CceecCcCCCceeEEEEeeeCCCCCCeeeeeecccc
Confidence 789999999999999988889999999999654443
No 206
>PLN02571 triacylglycerol lipase
Probab=96.04 E-value=0.0088 Score=49.02 Aligned_cols=21 Identities=24% Similarity=0.245 Sum_probs=18.3
Q ss_pred ceEEEEEeccchHHHHHHHhc
Q 026555 112 KMRYLLGESMGGAMVLLLHRK 132 (237)
Q Consensus 112 ~~~~l~G~S~Gg~~a~~~a~~ 132 (237)
.++++.|||+||.+|+..|..
T Consensus 226 ~sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 226 ISITICGHSLGAALATLNAVD 246 (413)
T ss_pred ccEEEeccchHHHHHHHHHHH
Confidence 379999999999999988764
No 207
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=96.02 E-value=0.023 Score=45.72 Aligned_cols=44 Identities=16% Similarity=0.243 Sum_probs=32.8
Q ss_pred hhcCCceEEEEEeccchHHHHHHHhcCC-----CcccEEEEcCCccccc
Q 026555 107 EENKEKMRYLLGESMGGAMVLLLHRKKP-----DYFDGAVLVAPMCKIA 150 (237)
Q Consensus 107 ~~~~~~~~~l~G~S~Gg~~a~~~a~~~p-----~~~~~~vl~~~~~~~~ 150 (237)
...+.+|+.++|||+|+.+....+.... ..|+.+++++.+....
T Consensus 215 ~~~G~RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gapv~~~ 263 (345)
T PF05277_consen 215 RNQGERPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAPVPSD 263 (345)
T ss_pred hcCCCCceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCCCCCC
Confidence 3346779999999999998876654332 3489999998776553
No 208
>PLN02454 triacylglycerol lipase
Probab=95.97 E-value=0.013 Score=48.02 Aligned_cols=39 Identities=18% Similarity=0.260 Sum_probs=26.9
Q ss_pred HHHHHHHHHHHHHhhhhcCCc--eEEEEEeccchHHHHHHHhc
Q 026555 92 LVDDCFNHFTSICEKEENKEK--MRYLLGESMGGAMVLLLHRK 132 (237)
Q Consensus 92 ~~~d~~~~~~~~~~~~~~~~~--~~~l~G~S~Gg~~a~~~a~~ 132 (237)
..+++...++.+++ ..... ++++.|||+||.+|+..|..
T Consensus 208 ~r~qvl~~V~~l~~--~Yp~~~~sI~vTGHSLGGALAtLaA~d 248 (414)
T PLN02454 208 ARSQLLAKIKELLE--RYKDEKLSIVLTGHSLGASLATLAAFD 248 (414)
T ss_pred HHHHHHHHHHHHHH--hCCCCCceEEEEecCHHHHHHHHHHHH
Confidence 44556666666532 22333 59999999999999988853
No 209
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=95.96 E-value=0.11 Score=43.45 Aligned_cols=115 Identities=17% Similarity=0.156 Sum_probs=72.5
Q ss_pred CCcEEEEEEcCCCCCCcCchHHHHH-------------------HHHhcCCEEEEee-cCCCCCCCC-CCCCcCChhhHH
Q 026555 35 EPKALIFICHGYAMECSIGMNSTAI-------------------RLANEGYACYGID-YQGHGKSAG-LSGYIDNFDDLV 93 (237)
Q Consensus 35 ~~~~~iv~~hG~~~~~~~~~~~~~~-------------------~l~~~g~~v~~~d-~~g~G~s~~-~~~~~~~~~~~~ 93 (237)
..+|+|+++.|.++.+..+ ..+.. -+... -.++.+| .-|.|.|.. ......++...-
T Consensus 99 ~~rPvi~wlNGGPGcSS~~-g~l~elGP~rI~~~~~P~~~~NP~SW~~~-adLvFiDqPvGTGfS~a~~~e~~~d~~~~~ 176 (498)
T COG2939 99 ANRPVIFWLNGGPGCSSVT-GLLGELGPKRIQSGTSPSYPDNPGSWLDF-ADLVFIDQPVGTGFSRALGDEKKKDFEGAG 176 (498)
T ss_pred CCCceEEEecCCCChHhhh-hhhhhcCCeeeeCCCCCCCCCCccccccC-CceEEEecCcccCcccccccccccchhccc
Confidence 4589999999998877654 22210 01111 3578888 669999884 222234556666
Q ss_pred HHHHHHHHHHHhh---hhcCCceEEEEEeccchHHHHHHHhcCC---CcccEEEEcCCcccccc
Q 026555 94 DDCFNHFTSICEK---EENKEKMRYLLGESMGGAMVLLLHRKKP---DYFDGAVLVAPMCKIAE 151 (237)
Q Consensus 94 ~d~~~~~~~~~~~---~~~~~~~~~l~G~S~Gg~~a~~~a~~~p---~~~~~~vl~~~~~~~~~ 151 (237)
+|+..+.+.+.+. ......+.+|+|.|.||.-+..+|...- ...++++++++......
T Consensus 177 ~D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~~~~~~~~~~nlssvligng 240 (498)
T COG2939 177 KDVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLEDNIALNGNVNLSSVLIGNG 240 (498)
T ss_pred hhHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHHhccccCCceEeeeeeecCC
Confidence 6776666655322 1113358999999999977766664322 34778888877766655
No 210
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=95.91 E-value=0.086 Score=39.44 Aligned_cols=81 Identities=26% Similarity=0.270 Sum_probs=51.6
Q ss_pred cEEEEEEcCCCCCCcCchHHHHHHHHhcCCEE-EEeecCCCCCCCCCCCCcCChhhHHHHHHHHHHHHHhhhhcCCceEE
Q 026555 37 KALIFICHGYAMECSIGMNSTAIRLANEGYAC-YGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEKEENKEKMRY 115 (237)
Q Consensus 37 ~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v-~~~d~~g~G~s~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 115 (237)
+..||+..|||.+...+ ..+. ...+|.+ +++|++..- ++. | + . ..+.+.
T Consensus 11 ~~LilfF~GWg~d~~~f-~hL~---~~~~~D~l~~yDYr~l~-----------~d~---~----~--~------~y~~i~ 60 (213)
T PF04301_consen 11 KELILFFAGWGMDPSPF-SHLI---LPENYDVLICYDYRDLD-----------FDF---D----L--S------GYREIY 60 (213)
T ss_pred CeEEEEEecCCCChHHh-hhcc---CCCCccEEEEecCcccc-----------ccc---c----c--c------cCceEE
Confidence 57899999999986544 3331 1234655 567876321 110 1 1 1 467999
Q ss_pred EEEeccchHHHHHHHhcCCCcccEEEEcCCcccc
Q 026555 116 LLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKI 149 (237)
Q Consensus 116 l~G~S~Gg~~a~~~a~~~p~~~~~~vl~~~~~~~ 149 (237)
++++|||-++|..+....| ++..|.+++....
T Consensus 61 lvAWSmGVw~A~~~l~~~~--~~~aiAINGT~~P 92 (213)
T PF04301_consen 61 LVAWSMGVWAANRVLQGIP--FKRAIAINGTPYP 92 (213)
T ss_pred EEEEeHHHHHHHHHhccCC--cceeEEEECCCCC
Confidence 9999999999988876554 5566666544433
No 211
>PLN03037 lipase class 3 family protein; Provisional
Probab=95.77 E-value=0.013 Score=49.12 Aligned_cols=40 Identities=23% Similarity=0.364 Sum_probs=26.2
Q ss_pred hHHHHHHHHHHHHHhhhhcCCceEEEEEeccchHHHHHHHhc
Q 026555 91 DLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRK 132 (237)
Q Consensus 91 ~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~ 132 (237)
+...++..+++.. .......++.+.|||+||.+|+..|..
T Consensus 299 QVl~eV~rLv~~Y--k~~ge~~SItVTGHSLGGALAtLaA~D 338 (525)
T PLN03037 299 QVMEEVKRLVNFF--KDRGEEVSLTITGHSLGGALALLNAYE 338 (525)
T ss_pred HHHHHHHHHHHhc--cccCCcceEEEeccCHHHHHHHHHHHH
Confidence 3445555555544 111123579999999999999988743
No 212
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=95.73 E-value=0.13 Score=39.47 Aligned_cols=103 Identities=8% Similarity=0.007 Sum_probs=58.7
Q ss_pred EEEEcCCCCCCcCchHHHHHHHHhcCCEEEEeecCCCCCCCCCCCCcCChhhHHHHHHHHHHHHHhhhhcCCceEEEEEe
Q 026555 40 IFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEKEENKEKMRYLLGE 119 (237)
Q Consensus 40 iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~G~ 119 (237)
+|++=||.+.....+....+...+.|++++.+-.+-....... ......++. +++.+.+....+..++++..+
T Consensus 2 lvvl~gW~gA~~~hl~KY~~~Y~~~g~~il~~~~~~~~~~~~~----~~~~~~~~~---l~~~l~~~~~~~~~~il~H~F 74 (240)
T PF05705_consen 2 LVVLLGWMGAKPKHLAKYSDLYQDPGFDILLVTSPPADFFWPS----KRLAPAADK---LLELLSDSQSASPPPILFHSF 74 (240)
T ss_pred EEEEEeCCCCCHHHHHHHHHHHHhcCCeEEEEeCCHHHHeeec----cchHHHHHH---HHHHhhhhccCCCCCEEEEEE
Confidence 6777788766664444555666667999988775532211100 122333333 333332111112248999999
Q ss_pred ccchHHHHHHHhc---------C-CCcccEEEEcCCcccc
Q 026555 120 SMGGAMVLLLHRK---------K-PDYFDGAVLVAPMCKI 149 (237)
Q Consensus 120 S~Gg~~a~~~a~~---------~-p~~~~~~vl~~~~~~~ 149 (237)
|.||...+..... . -.+++++|+-|++...
T Consensus 75 SnGG~~~~~~l~~~~~~~~~~~~~~~~i~g~I~DS~P~~~ 114 (240)
T PF05705_consen 75 SNGGSFLYSQLLEAYQSRKKFGKLLPRIKGIIFDSCPGIP 114 (240)
T ss_pred ECchHHHHHHHHHHHHhcccccccccccceeEEeCCCCcc
Confidence 9988777654331 1 1348999998877554
No 213
>KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=95.52 E-value=0.021 Score=46.31 Aligned_cols=87 Identities=11% Similarity=0.103 Sum_probs=46.4
Q ss_pred CCcEEEEEEcCCCC-CCcCchHHHHHHHHhc--CCEEEEeecCCC-CCCCCCCCCcCChhhHHHHHHHHHHHHHhhhhcC
Q 026555 35 EPKALIFICHGYAM-ECSIGMNSTAIRLANE--GYACYGIDYQGH-GKSAGLSGYIDNFDDLVDDCFNHFTSICEKEENK 110 (237)
Q Consensus 35 ~~~~~iv~~hG~~~-~~~~~~~~~~~~l~~~--g~~v~~~d~~g~-G~s~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 110 (237)
++...+|+.||+-+ +...| ...+...... +..++.....+. +.+.. ... .--...++++.+.+... .
T Consensus 78 k~~HLvVlthGi~~~~~~~~-~~~~~~~~kk~p~~~iv~~g~~~~~~~T~~-Gv~-~lG~Rla~~~~e~~~~~------s 148 (405)
T KOG4372|consen 78 KPKHLVVLTHGLHGADMEYW-KEKIEQMTKKMPDKLIVVRGKMNNMCQTFD-GVD-VLGERLAEEVKETLYDY------S 148 (405)
T ss_pred CCceEEEeccccccccHHHH-HHHHHhhhcCCCcceEeeeccccchhhccc-cce-eeecccHHHHhhhhhcc------c
Confidence 56789999999988 33334 4444455443 232333333221 11111 000 01122334444443333 4
Q ss_pred CceEEEEEeccchHHHHHHH
Q 026555 111 EKMRYLLGESMGGAMVLLLH 130 (237)
Q Consensus 111 ~~~~~l~G~S~Gg~~a~~~a 130 (237)
.+++-++|||+||+++....
T Consensus 149 i~kISfvghSLGGLvar~AI 168 (405)
T KOG4372|consen 149 IEKISFVGHSLGGLVARYAI 168 (405)
T ss_pred cceeeeeeeecCCeeeeEEE
Confidence 68999999999999987554
No 214
>PLN02408 phospholipase A1
Probab=95.48 E-value=0.024 Score=45.85 Aligned_cols=21 Identities=24% Similarity=0.281 Sum_probs=18.2
Q ss_pred ceEEEEEeccchHHHHHHHhc
Q 026555 112 KMRYLLGESMGGAMVLLLHRK 132 (237)
Q Consensus 112 ~~~~l~G~S~Gg~~a~~~a~~ 132 (237)
.++++.|||+||.+|...|..
T Consensus 200 ~sI~vTGHSLGGALAtLaA~d 220 (365)
T PLN02408 200 LSLTITGHSLGAALATLTAYD 220 (365)
T ss_pred ceEEEeccchHHHHHHHHHHH
Confidence 469999999999999988764
No 215
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=95.44 E-value=0.11 Score=40.97 Aligned_cols=136 Identities=19% Similarity=0.194 Sum_probs=87.5
Q ss_pred eeEeecCCcEEEEEEeecCC--CCCcEEEEEEcCCCCCCcCch---HHH-----------HHHHHhcCCEEEEeecC-CC
Q 026555 14 EFILNSRRVKLFTCSWIPQN--QEPKALIFICHGYAMECSIGM---NST-----------AIRLANEGYACYGIDYQ-GH 76 (237)
Q Consensus 14 ~~~~~~~g~~l~~~~~~~~~--~~~~~~iv~~hG~~~~~~~~~---~~~-----------~~~l~~~g~~v~~~d~~-g~ 76 (237)
.++...++..+.++.|.... ..-+|..+.+.|.++.+..-| .++ ...|.. ..++.+|-| |.
T Consensus 6 g~v~vr~~a~~F~wly~~~~~~ks~~pl~lwlqGgpGaSstG~GNFeE~GPl~~~~~~r~~TWlk~--adllfvDnPVGa 83 (414)
T KOG1283|consen 6 GYVDVRTGAHMFWWLYYATANVKSERPLALWLQGGPGASSTGFGNFEELGPLDLDGSPRDWTWLKD--ADLLFVDNPVGA 83 (414)
T ss_pred cceeeecCceEEEEEeeeccccccCCCeeEEecCCCCCCCcCccchhhcCCcccCCCcCCchhhhh--ccEEEecCCCcC
Confidence 34555677788888875432 234688899998876655332 222 122322 456666655 88
Q ss_pred CCCC--CCCCCcCChhhHHHHHHHHHHHHHhh-hhcCCceEEEEEeccchHHHHHHHhcCC---------CcccEEEEcC
Q 026555 77 GKSA--GLSGYIDNFDDLVDDCFNHFTSICEK-EENKEKMRYLLGESMGGAMVLLLHRKKP---------DYFDGAVLVA 144 (237)
Q Consensus 77 G~s~--~~~~~~~~~~~~~~d~~~~~~~~~~~-~~~~~~~~~l~G~S~Gg~~a~~~a~~~p---------~~~~~~vl~~ 144 (237)
|.|- +...+..+.++.+.|+.++++.+... ++..-.|++++..|.||-+|..++...- ..+.+++|=.
T Consensus 84 GfSyVdg~~~Y~~~~~qia~Dl~~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~~aIk~G~i~~nf~~VaLGD 163 (414)
T KOG1283|consen 84 GFSYVDGSSAYTTNNKQIALDLVELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELDDAIKRGEIKLNFIGVALGD 163 (414)
T ss_pred ceeeecCcccccccHHHHHHHHHHHHHHHHhcCccccccceEEEEhhcccchhhhhhhhHHHHHhcCceeecceeEEccC
Confidence 8775 34444457788899999999887543 2334569999999999999887775422 2356677766
Q ss_pred Ccccccc
Q 026555 145 PMCKIAE 151 (237)
Q Consensus 145 ~~~~~~~ 151 (237)
+.....+
T Consensus 164 SWISP~D 170 (414)
T KOG1283|consen 164 SWISPED 170 (414)
T ss_pred cccChhH
Confidence 6555443
No 216
>PLN02934 triacylglycerol lipase
Probab=95.44 E-value=0.023 Score=47.68 Aligned_cols=34 Identities=26% Similarity=0.450 Sum_probs=24.4
Q ss_pred HHHHHHHHHhhhhcCCceEEEEEeccchHHHHHHHh
Q 026555 96 CFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHR 131 (237)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~ 131 (237)
+...++.+ .++....++++.|||+||.+|..++.
T Consensus 307 v~~~lk~l--l~~~p~~kIvVTGHSLGGALAtLaA~ 340 (515)
T PLN02934 307 VRSKLKSL--LKEHKNAKFVVTGHSLGGALAILFPT 340 (515)
T ss_pred HHHHHHHH--HHHCCCCeEEEeccccHHHHHHHHHH
Confidence 34444444 23336679999999999999998874
No 217
>KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism]
Probab=95.39 E-value=0.3 Score=41.83 Aligned_cols=114 Identities=20% Similarity=0.276 Sum_probs=64.3
Q ss_pred EEEEeecCCCCCcEEEEEEcCCCC------CCcCchHHHHHHHHhcCCEEEEeecCCCCCCCCCCCCcCChhhHHHHHHH
Q 026555 25 FTCSWIPQNQEPKALIFICHGYAM------ECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFN 98 (237)
Q Consensus 25 ~~~~~~~~~~~~~~~iv~~hG~~~------~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~d~~~ 98 (237)
.|+.|.++....+..|+=+||.|- +.+.|.+.++..| |+.|+.+|+.=--.. -+..-.+++.-
T Consensus 384 ~~~~wh~P~p~S~sli~HcHGGGfVAqsSkSHE~YLr~Wa~aL---~cPiiSVdYSLAPEa--------PFPRaleEv~f 452 (880)
T KOG4388|consen 384 SLELWHRPAPRSRSLIVHCHGGGFVAQSSKSHEPYLRSWAQAL---GCPIISVDYSLAPEA--------PFPRALEEVFF 452 (880)
T ss_pred ccccCCCCCCCCceEEEEecCCceeeeccccccHHHHHHHHHh---CCCeEEeeeccCCCC--------CCCcHHHHHHH
Confidence 566666554344668888999762 2233444444444 799999997411111 12222344444
Q ss_pred HHHHHHhh---hhcCCceEEEEEeccchHHHHHHHh----cCCCcccEEEEcCCcccc
Q 026555 99 HFTSICEK---EENKEKMRYLLGESMGGAMVLLLHR----KKPDYFDGAVLVAPMCKI 149 (237)
Q Consensus 99 ~~~~~~~~---~~~~~~~~~l~G~S~Gg~~a~~~a~----~~p~~~~~~vl~~~~~~~ 149 (237)
+.-+++.. -..-.++|++.|-|.||++..-.+. ..=...+|+++.=++..+
T Consensus 453 AYcW~inn~allG~TgEriv~aGDSAGgNL~~~VaLr~i~~gvRvPDGl~laY~ptl~ 510 (880)
T KOG4388|consen 453 AYCWAINNCALLGSTGERIVLAGDSAGGNLCFTVALRAIAYGVRVPDGLMLAYPPTLL 510 (880)
T ss_pred HHHHHhcCHHHhCcccceEEEeccCCCcceeehhHHHHHHhCCCCCCceEEecChhhc
Confidence 44444221 1223679999999999987654443 222235678886555443
No 218
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=95.18 E-value=0.051 Score=41.63 Aligned_cols=119 Identities=13% Similarity=0.041 Sum_probs=72.6
Q ss_pred EEEEEEeecCCCCCcEEEEEEcCCCCCCcCchH-HHHHHHHhcCCEEEEeecCCCCCCCCCCCCcCChhhHHHHHHHHHH
Q 026555 23 KLFTCSWIPQNQEPKALIFICHGYAMECSIGMN-STAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFT 101 (237)
Q Consensus 23 ~l~~~~~~~~~~~~~~~iv~~hG~~~~~~~~~~-~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~d~~~~~~ 101 (237)
+-++..+.|+ ++.+..+.+-|.|.+...- + -+.+.+.+.+...+..+-|-+|........ ...-.++.|+-.+=+
T Consensus 101 ~A~~~~liPQ--K~~~KOG~~a~tgdh~y~r-r~~L~~p~~k~~i~tmvle~pfYgqr~p~~q~-~~~Le~vtDlf~mG~ 176 (371)
T KOG1551|consen 101 TARVAWLIPQ--KMADLCLSWALTGDHVYTR-RLVLSKPINKREIATMVLEKPFYGQRVPEEQI-IHMLEYVTDLFKMGR 176 (371)
T ss_pred ceeeeeeccc--CcCCeeEEEeecCCceeEe-eeeecCchhhhcchheeeecccccccCCHHHH-HHHHHHHHHHHHhhH
Confidence 4556666776 5567788888777765522 2 345666677788888999999876533211 111222233332221
Q ss_pred HHHhh--------hhcCCceEEEEEeccchHHHHHHHhcCCCcccEEEEcCC
Q 026555 102 SICEK--------EENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAP 145 (237)
Q Consensus 102 ~~~~~--------~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~~~~vl~~~ 145 (237)
++.++ ...+..+..++|-||||.+|......++..|.-+=+.++
T Consensus 177 A~I~E~~~lf~Ws~~~g~g~~~~~g~Smgg~~a~~vgS~~q~Pva~~p~l~~ 228 (371)
T KOG1551|consen 177 ATIQEFVKLFTWSSADGLGNLNLVGRSMGGDIANQVGSLHQKPVATAPCLNS 228 (371)
T ss_pred HHHHHHHHhcccccccCcccceeeeeecccHHHHhhcccCCCCccccccccc
Confidence 11111 122467999999999999999998877766655444443
No 219
>PLN02324 triacylglycerol lipase
Probab=94.98 E-value=0.039 Score=45.29 Aligned_cols=20 Identities=25% Similarity=0.297 Sum_probs=17.9
Q ss_pred ceEEEEEeccchHHHHHHHh
Q 026555 112 KMRYLLGESMGGAMVLLLHR 131 (237)
Q Consensus 112 ~~~~l~G~S~Gg~~a~~~a~ 131 (237)
.++.+.|||+||.+|+..|.
T Consensus 215 ~sItvTGHSLGGALAtLaA~ 234 (415)
T PLN02324 215 ISITFTGHSLGAVMSVLSAA 234 (415)
T ss_pred ceEEEecCcHHHHHHHHHHH
Confidence 47999999999999998875
No 220
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=94.90 E-value=0.16 Score=40.81 Aligned_cols=85 Identities=18% Similarity=0.176 Sum_probs=54.4
Q ss_pred CEEEEeecC-CCCCCCCCCCC-cCChhhHHHHHHHHHHHHHhh-hhcCCceEEEEEeccchHHHHHHHh----cC-----
Q 026555 66 YACYGIDYQ-GHGKSAGLSGY-IDNFDDLVDDCFNHFTSICEK-EENKEKMRYLLGESMGGAMVLLLHR----KK----- 133 (237)
Q Consensus 66 ~~v~~~d~~-g~G~s~~~~~~-~~~~~~~~~d~~~~~~~~~~~-~~~~~~~~~l~G~S~Gg~~a~~~a~----~~----- 133 (237)
.+++-+|.| |.|.|-..... ..+-+..++|+..++....++ .+....+++|.|.|.||.-+-.+|. .+
T Consensus 2 aNvLfiDqPvGvGfSy~~~~~~~~~d~~~a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I~~~n~~~~~ 81 (319)
T PLN02213 2 ANIIFLDQPVGSGFSYSKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCE 81 (319)
T ss_pred ccEEEecCCCCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHHHhhcccccC
Confidence 357888987 99998644322 122233457777777765432 2335679999999999965554443 22
Q ss_pred -CCcccEEEEcCCccccc
Q 026555 134 -PDYFDGAVLVAPMCKIA 150 (237)
Q Consensus 134 -p~~~~~~vl~~~~~~~~ 150 (237)
+-.++|+++-++.....
T Consensus 82 ~~inLkGi~IGNg~t~~~ 99 (319)
T PLN02213 82 PPINLQGYMLGNPVTYMD 99 (319)
T ss_pred CceeeeEEEeCCCCCCcc
Confidence 12588999888776553
No 221
>PLN02802 triacylglycerol lipase
Probab=94.83 E-value=0.051 Score=45.68 Aligned_cols=21 Identities=29% Similarity=0.430 Sum_probs=18.2
Q ss_pred ceEEEEEeccchHHHHHHHhc
Q 026555 112 KMRYLLGESMGGAMVLLLHRK 132 (237)
Q Consensus 112 ~~~~l~G~S~Gg~~a~~~a~~ 132 (237)
.++++.|||+||.+|+..|..
T Consensus 330 ~sI~VTGHSLGGALAtLaA~d 350 (509)
T PLN02802 330 LSITVTGHSLGAALALLVADE 350 (509)
T ss_pred ceEEEeccchHHHHHHHHHHH
Confidence 479999999999999987753
No 222
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=94.62 E-value=0.13 Score=36.83 Aligned_cols=57 Identities=16% Similarity=0.127 Sum_probs=41.8
Q ss_pred hHHHHHHHHHHHHHhhhhcCCceEEEEEeccchHHHHHHHhcCCCcccEEEEcCCcccc
Q 026555 91 DLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKI 149 (237)
Q Consensus 91 ~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~~~~vl~~~~~~~ 149 (237)
+.++-=.+.-+.+ ..+.-+.+.++-|-||||.-|+.+.-++|+.+.++|.+|+..+.
T Consensus 82 dr~~rH~AyerYv--~eEalpgs~~~sgcsmGayhA~nfvfrhP~lftkvialSGvYda 138 (227)
T COG4947 82 DRAERHRAYERYV--IEEALPGSTIVSGCSMGAYHAANFVFRHPHLFTKVIALSGVYDA 138 (227)
T ss_pred HHHHHHHHHHHHH--HHhhcCCCccccccchhhhhhhhhheeChhHhhhheeecceeeH
Confidence 3333333444444 22224466888999999999999999999999999999877654
No 223
>PLN02761 lipase class 3 family protein
Probab=94.57 E-value=0.058 Score=45.49 Aligned_cols=21 Identities=24% Similarity=0.327 Sum_probs=18.2
Q ss_pred CceEEEEEeccchHHHHHHHh
Q 026555 111 EKMRYLLGESMGGAMVLLLHR 131 (237)
Q Consensus 111 ~~~~~l~G~S~Gg~~a~~~a~ 131 (237)
..++.+.|||+||.+|+..|.
T Consensus 293 ~~sItVTGHSLGGALAtLaA~ 313 (527)
T PLN02761 293 EISITVTGHSLGASLALVSAY 313 (527)
T ss_pred CceEEEeccchHHHHHHHHHH
Confidence 347999999999999998774
No 224
>PLN02753 triacylglycerol lipase
Probab=94.48 E-value=0.054 Score=45.70 Aligned_cols=21 Identities=29% Similarity=0.445 Sum_probs=18.7
Q ss_pred CceEEEEEeccchHHHHHHHh
Q 026555 111 EKMRYLLGESMGGAMVLLLHR 131 (237)
Q Consensus 111 ~~~~~l~G~S~Gg~~a~~~a~ 131 (237)
..++.+.|||+||.+|+..|.
T Consensus 311 ~~sItVTGHSLGGALAtLaA~ 331 (531)
T PLN02753 311 DLSITVTGHSLGGALAILSAY 331 (531)
T ss_pred CceEEEEccCHHHHHHHHHHH
Confidence 468999999999999998874
No 225
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=94.44 E-value=0.27 Score=37.28 Aligned_cols=79 Identities=18% Similarity=0.152 Sum_probs=44.7
Q ss_pred CCEEEEeecCCC-CCCC--CCCCCcCChhhHHHHHHHHHHHHHhhhhcCCceEEEEEeccchHHHHHHHhcC---CC---
Q 026555 65 GYACYGIDYQGH-GKSA--GLSGYIDNFDDLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKK---PD--- 135 (237)
Q Consensus 65 g~~v~~~d~~g~-G~s~--~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~---p~--- 135 (237)
||.+..+++|.. +.-. +......+..+-++.+.++++.. ....++++++|+|+|+.++...+.+. ++
T Consensus 2 ~~~~~~V~YPa~f~P~~g~~~~t~~~Sv~~G~~~L~~ai~~~----~~~~~~vvV~GySQGA~Va~~~~~~l~~~~~~~~ 77 (225)
T PF08237_consen 2 GYNVVAVDYPASFWPVTGIGSPTYDESVAEGVANLDAAIRAA----IAAGGPVVVFGYSQGAVVASNVLRRLAADGDPPP 77 (225)
T ss_pred CcceEEecCCchhcCcCCCCCCccchHHHHHHHHHHHHHHhh----ccCCCCEEEEEECHHHHHHHHHHHHHHhcCCCCc
Confidence 567777777752 2111 11111134444455555555543 11567899999999999998776643 11
Q ss_pred cccEEEEcCCcc
Q 026555 136 YFDGAVLVAPMC 147 (237)
Q Consensus 136 ~~~~~vl~~~~~ 147 (237)
..-..|+++-+.
T Consensus 78 ~~l~fVl~gnP~ 89 (225)
T PF08237_consen 78 DDLSFVLIGNPR 89 (225)
T ss_pred CceEEEEecCCC
Confidence 233466665443
No 226
>PLN02719 triacylglycerol lipase
Probab=94.26 E-value=0.063 Score=45.19 Aligned_cols=20 Identities=30% Similarity=0.406 Sum_probs=17.9
Q ss_pred ceEEEEEeccchHHHHHHHh
Q 026555 112 KMRYLLGESMGGAMVLLLHR 131 (237)
Q Consensus 112 ~~~~l~G~S~Gg~~a~~~a~ 131 (237)
.++.+.|||+||.+|+..|.
T Consensus 298 ~sItVTGHSLGGALAtLaA~ 317 (518)
T PLN02719 298 LSITVTGHSLGGALAVLSAY 317 (518)
T ss_pred ceEEEecCcHHHHHHHHHHH
Confidence 48999999999999998774
No 227
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=94.17 E-value=0.072 Score=43.05 Aligned_cols=36 Identities=19% Similarity=0.216 Sum_probs=26.8
Q ss_pred hHHHHHHHHHHHHHhhhhcCCceEEEEEeccchHHHHHHHhc
Q 026555 91 DLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRK 132 (237)
Q Consensus 91 ~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~ 132 (237)
++.+++..+++.. ..-++.+.|||+||.+|...|..
T Consensus 156 ~~~~~~~~L~~~~------~~~~i~vTGHSLGgAlA~laa~~ 191 (336)
T KOG4569|consen 156 GLDAELRRLIELY------PNYSIWVTGHSLGGALASLAALD 191 (336)
T ss_pred HHHHHHHHHHHhc------CCcEEEEecCChHHHHHHHHHHH
Confidence 4445555555544 67899999999999999887753
No 228
>PLN02847 triacylglycerol lipase
Probab=94.06 E-value=0.1 Score=44.73 Aligned_cols=25 Identities=28% Similarity=0.368 Sum_probs=20.2
Q ss_pred hcCCceEEEEEeccchHHHHHHHhc
Q 026555 108 ENKEKMRYLLGESMGGAMVLLLHRK 132 (237)
Q Consensus 108 ~~~~~~~~l~G~S~Gg~~a~~~a~~ 132 (237)
..+.-+++++|||+||.+|..++..
T Consensus 247 ~~PdYkLVITGHSLGGGVAALLAil 271 (633)
T PLN02847 247 EYPDFKIKIVGHSLGGGTAALLTYI 271 (633)
T ss_pred HCCCCeEEEeccChHHHHHHHHHHH
Confidence 3456799999999999999877653
No 229
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=94.01 E-value=0.17 Score=47.01 Aligned_cols=96 Identities=16% Similarity=0.120 Sum_probs=57.7
Q ss_pred CcEEEEEEcCCCCCCcCchHHHHHHHHhcCCEEEEeecCCCCCCCCCCCCcCChhhHHHHHHHHHHHHHhhhhcCCceEE
Q 026555 36 PKALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEKEENKEKMRY 115 (237)
Q Consensus 36 ~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 115 (237)
..|+++|+|.+-+..... .+++..| ..|.+|.-........+++..+.-...-++. -....|..
T Consensus 2122 e~~~~Ffv~pIEG~tt~l-~~la~rl----------e~PaYglQ~T~~vP~dSies~A~~yirqirk-----vQP~GPYr 2185 (2376)
T KOG1202|consen 2122 EEPPLFFVHPIEGFTTAL-ESLASRL----------EIPAYGLQCTEAVPLDSIESLAAYYIRQIRK-----VQPEGPYR 2185 (2376)
T ss_pred cCCceEEEeccccchHHH-HHHHhhc----------CCcchhhhccccCCcchHHHHHHHHHHHHHh-----cCCCCCee
Confidence 467899999887755433 4444444 3455554332222223455544443333333 33667999
Q ss_pred EEEeccchHHHHHHHhcC--CCcccEEEEcCCcc
Q 026555 116 LLGESMGGAMVLLLHRKK--PDYFDGAVLVAPMC 147 (237)
Q Consensus 116 l~G~S~Gg~~a~~~a~~~--p~~~~~~vl~~~~~ 147 (237)
++|+|.|+.++...|... .+....+|++.+..
T Consensus 2186 l~GYSyG~~l~f~ma~~Lqe~~~~~~lillDGsp 2219 (2376)
T KOG1202|consen 2186 LAGYSYGACLAFEMASQLQEQQSPAPLILLDGSP 2219 (2376)
T ss_pred eeccchhHHHHHHHHHHHHhhcCCCcEEEecCch
Confidence 999999999999887643 23355577775544
No 230
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=93.55 E-value=0.18 Score=43.15 Aligned_cols=60 Identities=18% Similarity=0.256 Sum_probs=37.9
Q ss_pred hHHHHHHHHHHHHHhhhhcCCceEEEEEeccchHHHHHHHhc-----CCC------cccEEEEcCCccccc
Q 026555 91 DLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRK-----KPD------YFDGAVLVAPMCKIA 150 (237)
Q Consensus 91 ~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~-----~p~------~~~~~vl~~~~~~~~ 150 (237)
.++.-...+++.+....-.+..+++.+||||||.++=.+... .|+ ...|+|+++.+-...
T Consensus 505 sl~~Rs~~lleql~~~~VG~~RPivwI~HSmGGLl~K~lLlda~~S~kP~ms~l~kNtrGiiFls~PHrGS 575 (697)
T KOG2029|consen 505 SLAARSNELLEQLQAAGVGDDRPIVWIGHSMGGLLAKKLLLDAYCSSKPDMSNLNKNTRGIIFLSVPHRGS 575 (697)
T ss_pred HHHHHHHHHHHHHHHhccCCCCceEEEecccchHHHHHHHHHHhhcCCchhhhhhccCCceEEEecCCCCC
Confidence 334444566666532223347899999999999888654432 332 367888887765544
No 231
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=93.47 E-value=0.31 Score=41.92 Aligned_cols=107 Identities=17% Similarity=0.068 Sum_probs=64.3
Q ss_pred CcEEEEEEcCCC--CCCcCchHHHHHHHHhcC--CEEEEeecCCCCCCCCCCCCcCChhhHHHHHHHHHHHHHh--hhhc
Q 026555 36 PKALIFICHGYA--MECSIGMNSTAIRLANEG--YACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICE--KEEN 109 (237)
Q Consensus 36 ~~~~iv~~hG~~--~~~~~~~~~~~~~l~~~g--~~v~~~d~~g~G~s~~~~~~~~~~~~~~~d~~~~~~~~~~--~~~~ 109 (237)
..|.++++||.+ .+...|+..+...+.-.| ..+-.+|++.--. + .++...++.+..+.+..+. ....
T Consensus 175 ~spl~i~aps~p~ap~tSd~~~~wqs~lsl~gevvev~tfdl~n~ig--G-----~nI~h~ae~~vSf~r~kvlei~gef 247 (784)
T KOG3253|consen 175 ASPLAIKAPSTPLAPKTSDRMWSWQSRLSLKGEVVEVPTFDLNNPIG--G-----ANIKHAAEYSVSFDRYKVLEITGEF 247 (784)
T ss_pred CCceEEeccCCCCCCccchHHHhHHHHHhhhceeeeeccccccCCCC--C-----cchHHHHHHHHHHhhhhhhhhhccC
Confidence 367899999988 222223233444444444 3455666653210 0 2455556666666553321 2344
Q ss_pred CCceEEEEEeccchHHHHHHHhcCC-CcccEEEEcCCcccc
Q 026555 110 KEKMRYLLGESMGGAMVLLLHRKKP-DYFDGAVLVAPMCKI 149 (237)
Q Consensus 110 ~~~~~~l~G~S~Gg~~a~~~a~~~p-~~~~~~vl~~~~~~~ 149 (237)
...+++|+|.|||+.++.+....+. ..|+++|.++-+...
T Consensus 248 pha~IiLvGrsmGAlVachVSpsnsdv~V~~vVCigypl~~ 288 (784)
T KOG3253|consen 248 PHAPIILVGRSMGALVACHVSPSNSDVEVDAVVCIGYPLDT 288 (784)
T ss_pred CCCceEEEecccCceeeEEeccccCCceEEEEEEecccccC
Confidence 5679999999999999988876543 348888888755443
No 232
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=93.27 E-value=1.5 Score=28.62 Aligned_cols=82 Identities=13% Similarity=0.034 Sum_probs=53.0
Q ss_pred HHHHHHHHhcCCEEEEeecCCCCCCCCCCCCcCChhhHHHHHHHHHHHHHhhhhcCCceEEEEEeccch--HHHHHHHhc
Q 026555 55 NSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEKEENKEKMRYLLGESMGG--AMVLLLHRK 132 (237)
Q Consensus 55 ~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg--~~a~~~a~~ 132 (237)
..+.+.+..+||..=.+.++..|.+....-.....+.=...+..+++.. ...+++++|-|--. -+-..++.+
T Consensus 14 ~~l~~Fl~~~~~P~G~~~Lr~~~~~~~~~~~~~~~~~K~~~i~~i~~~f------P~~kfiLIGDsgq~DpeiY~~ia~~ 87 (100)
T PF09949_consen 14 PFLRDFLRRNGFPAGPLLLRDYGPSLSGLFKSGAEEHKRDNIERILRDF------PERKFILIGDSGQHDPEIYAEIARR 87 (100)
T ss_pred HHHHHHHHhcCCCCCceEcccCCccccccccCCchhHHHHHHHHHHHHC------CCCcEEEEeeCCCcCHHHHHHHHHH
Confidence 5566666667787666777777654322111011122244566666655 78899999999776 555677889
Q ss_pred CCCcccEEEE
Q 026555 133 KPDYFDGAVL 142 (237)
Q Consensus 133 ~p~~~~~~vl 142 (237)
+|++|.++.+
T Consensus 88 ~P~~i~ai~I 97 (100)
T PF09949_consen 88 FPGRILAIYI 97 (100)
T ss_pred CCCCEEEEEE
Confidence 9999988765
No 233
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=93.19 E-value=0.27 Score=38.25 Aligned_cols=42 Identities=19% Similarity=0.318 Sum_probs=30.2
Q ss_pred hHHHHHHHHHHHHHhhhhcCCceEEEEEeccchHHHHHHHhcCC
Q 026555 91 DLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKP 134 (237)
Q Consensus 91 ~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p 134 (237)
.+..+..+++..+ ++.....++.+-|||+||.+|..+-.++.
T Consensus 257 ryySa~ldI~~~v--~~~Ypda~iwlTGHSLGGa~AsLlG~~fg 298 (425)
T KOG4540|consen 257 RYYSAALDILGAV--RRIYPDARIWLTGHSLGGAIASLLGIRFG 298 (425)
T ss_pred chhHHHHHHHHHH--HHhCCCceEEEeccccchHHHHHhccccC
Confidence 3344444455555 44456789999999999999999887764
No 234
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=93.19 E-value=0.27 Score=38.25 Aligned_cols=42 Identities=19% Similarity=0.318 Sum_probs=30.2
Q ss_pred hHHHHHHHHHHHHHhhhhcCCceEEEEEeccchHHHHHHHhcCC
Q 026555 91 DLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKP 134 (237)
Q Consensus 91 ~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p 134 (237)
.+..+..+++..+ ++.....++.+-|||+||.+|..+-.++.
T Consensus 257 ryySa~ldI~~~v--~~~Ypda~iwlTGHSLGGa~AsLlG~~fg 298 (425)
T COG5153 257 RYYSAALDILGAV--RRIYPDARIWLTGHSLGGAIASLLGIRFG 298 (425)
T ss_pred chhHHHHHHHHHH--HHhCCCceEEEeccccchHHHHHhccccC
Confidence 3344444455555 44456789999999999999999887764
No 235
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=92.87 E-value=1.7 Score=36.70 Aligned_cols=124 Identities=18% Similarity=0.107 Sum_probs=73.4
Q ss_pred eeEeecCCcEEEEEEeecCCCCCcEEEEEEcCCCCCCcCchHHHHHHHHhcCCEE-EEeecCCCCCCCCCCCCcCChhhH
Q 026555 14 EFILNSRRVKLFTCSWIPQNQEPKALIFICHGYAMECSIGMNSTAIRLANEGYAC-YGIDYQGHGKSAGLSGYIDNFDDL 92 (237)
Q Consensus 14 ~~~~~~~g~~l~~~~~~~~~~~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v-~~~d~~g~G~s~~~~~~~~~~~~~ 92 (237)
..+.++.+..+.|+.. |.+ =..|..|..-|+.......--.+++.| |... +.-|.|=.|-+--. .-+++
T Consensus 268 ~r~~D~~reEi~yYFn-PGD-~KPPL~VYFSGyR~aEGFEgy~MMk~L---g~PfLL~~DpRleGGaFYl-----Gs~ey 337 (511)
T TIGR03712 268 QRLVDSKRQEFIYYFN-PGD-FKPPLNVYFSGYRPAEGFEGYFMMKRL---GAPFLLIGDPRLEGGAFYL-----GSDEY 337 (511)
T ss_pred ceEecCCCCeeEEecC-CcC-CCCCeEEeeccCcccCcchhHHHHHhc---CCCeEEeeccccccceeee-----CcHHH
Confidence 3445556666666533 443 335788999999875443212344444 5544 55688766644311 12233
Q ss_pred HHHHHHHHHHHHhhhhcCCceEEEEEeccchHHHHHHHhcCCCcccEEEEcCCcccc
Q 026555 93 VDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCKI 149 (237)
Q Consensus 93 ~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~~~~vl~~~~~~~ 149 (237)
-..+.+.|+..+..-..+....++-|.|||..=|+.++++.. ..++|+--|...+
T Consensus 338 E~~I~~~I~~~L~~LgF~~~qLILSGlSMGTfgAlYYga~l~--P~AIiVgKPL~NL 392 (511)
T TIGR03712 338 EQGIINVIQEKLDYLGFDHDQLILSGLSMGTFGALYYGAKLS--PHAIIVGKPLVNL 392 (511)
T ss_pred HHHHHHHHHHHHHHhCCCHHHeeeccccccchhhhhhcccCC--CceEEEcCcccch
Confidence 334444444444333445678999999999999999988652 4466665565543
No 236
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=91.04 E-value=3.3 Score=32.56 Aligned_cols=94 Identities=10% Similarity=-0.018 Sum_probs=53.5
Q ss_pred EEEEEEcCCCCCCcCc-----hHHHHHHH-HhcCCEEEEeecCCCCCC--------CCCCC---CcCChhhHHHHHHHHH
Q 026555 38 ALIFICHGYAMECSIG-----MNSTAIRL-ANEGYACYGIDYQGHGKS--------AGLSG---YIDNFDDLVDDCFNHF 100 (237)
Q Consensus 38 ~~iv~~hG~~~~~~~~-----~~~~~~~l-~~~g~~v~~~d~~g~G~s--------~~~~~---~~~~~~~~~~d~~~~~ 100 (237)
..||++=|.+.+...- +..+.+.+ ...+-..+.+-.+|.|.. ..... ....-..+.+.+..+.
T Consensus 2 ~iv~~fDGT~n~~~~~~~~TNV~rL~~~~~~~~~~~q~~~Y~~GvGt~~~~~~~~~~~~~~~~~~~a~g~g~~~~I~~ay 81 (277)
T PF09994_consen 2 RIVVFFDGTGNNPDNDPPPTNVARLYDAYKDRDGERQIVYYIPGVGTEFGSEFGESGRALDRLLGGAFGWGIEARIRDAY 81 (277)
T ss_pred cEEEEecCCCCCCCCCccccHHHHHHHHhhccCCCceeEEEecccccccccccccccchhhhccCchhhcchHHHHHHHH
Confidence 4577777776555422 23455555 222335566677788771 11100 0001123445566666
Q ss_pred HHHHhhhhcCCceEEEEEeccchHHHHHHHhc
Q 026555 101 TSICEKEENKEKMRYLLGESMGGAMVLLLHRK 132 (237)
Q Consensus 101 ~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~ 132 (237)
..+.+.. ....++.++|+|-|+..|-.++..
T Consensus 82 ~~l~~~~-~~gd~I~lfGFSRGA~~AR~~a~~ 112 (277)
T PF09994_consen 82 RFLSKNY-EPGDRIYLFGFSRGAYTARAFANM 112 (277)
T ss_pred HHHHhcc-CCcceEEEEecCccHHHHHHHHHH
Confidence 6653322 355679999999999999988864
No 237
>KOG2385 consensus Uncharacterized conserved protein [Function unknown]
Probab=90.79 E-value=0.74 Score=38.86 Aligned_cols=45 Identities=16% Similarity=0.218 Sum_probs=33.6
Q ss_pred hhhcCCceEEEEEeccchHHHHHHHh----c-CCCcccEEEEcCCccccc
Q 026555 106 KEENKEKMRYLLGESMGGAMVLLLHR----K-KPDYFDGAVLVAPMCKIA 150 (237)
Q Consensus 106 ~~~~~~~~~~l~G~S~Gg~~a~~~a~----~-~p~~~~~~vl~~~~~~~~ 150 (237)
....+.+|+.++|+|+|+.+...... + .-..|..+++++++....
T Consensus 441 ~r~qG~RPVTLVGFSLGARvIf~CL~~Lakkke~~iIEnViL~GaPv~~k 490 (633)
T KOG2385|consen 441 KRSQGNRPVTLVGFSLGARVIFECLLELAKKKEVGIIENVILFGAPVPTK 490 (633)
T ss_pred HhccCCCceeEeeeccchHHHHHHHHHHhhcccccceeeeeeccCCccCC
Confidence 34447889999999999998875543 2 225699999998877654
No 238
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=89.45 E-value=1.5 Score=34.08 Aligned_cols=118 Identities=20% Similarity=0.170 Sum_probs=67.6
Q ss_pred cEEEEEEeecCCC---CCcEEEEEEcCCCCCCcCchHHHHHHHHhcCCEEEEeecCCCCCCC----------CCCCCcC-
Q 026555 22 VKLFTCSWIPQNQ---EPKALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSA----------GLSGYID- 87 (237)
Q Consensus 22 ~~l~~~~~~~~~~---~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~----------~~~~~~~- 87 (237)
..+....+.|... .+.|.+++.||++...... ...+..+++.++.+...+...+|.+. .......
T Consensus 31 ~~~~~~l~~p~~~~~~~~~p~v~~~h~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 109 (299)
T COG1073 31 IALAAVLHLPPSGNEEKKLPAVVFLHGFGSSKEQS-LGYAVLLAEKGYRVLAGDASLFGESGGDPRGLADSEGYAEDFSA 109 (299)
T ss_pred ceeeeEEEecCCCCccccCceEEeccCccccccCc-chHHHHhhhceeEEeeeccccccccccccccccCccccccccch
Confidence 4455555666543 3578999999999988865 44677888888887777653222222 1110000
Q ss_pred ------ChhhHHHHHHHHHHHHHhhhhcCCceEEEEEeccchHHHHHHHhcCCC--cccEEEEcCCccc
Q 026555 88 ------NFDDLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPD--YFDGAVLVAPMCK 148 (237)
Q Consensus 88 ------~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~--~~~~~vl~~~~~~ 148 (237)
.......+... ......+....|+++|+..+..++...+. ....++.++.+..
T Consensus 110 ~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~g 170 (299)
T COG1073 110 AVLLLLSEGVLDKDYRL--------LGASLGPRILAGLSLGGPSAGALLAWGPTRLDASRIVVWGESLG 170 (299)
T ss_pred hheeeeccccccHHHHH--------HhhhcCcceEEEEEeeccchHHHhhcchhHHHhhcccceeeccC
Confidence 00111111000 11133688999999999999988887763 3334444443333
No 239
>COG3673 Uncharacterized conserved protein [Function unknown]
Probab=88.55 E-value=8.9 Score=30.76 Aligned_cols=96 Identities=19% Similarity=0.072 Sum_probs=59.6
Q ss_pred CCcEEEEEEcCCCCCCc----CchHHHHHHHHh-cCCEEEEeecCCCCCCCCC------------CCCcCChhhHHHHHH
Q 026555 35 EPKALIFICHGYAMECS----IGMNSTAIRLAN-EGYACYGIDYQGHGKSAGL------------SGYIDNFDDLVDDCF 97 (237)
Q Consensus 35 ~~~~~iv~~hG~~~~~~----~~~~~~~~~l~~-~g~~v~~~d~~g~G~s~~~------------~~~~~~~~~~~~d~~ 97 (237)
.++..|+.+-|....-. ..+-.+..-|.. .+-+++++--+|.|.-.-. ....---..+.+++.
T Consensus 29 s~k~lV~CfDGT~nrfg~qp~TNVv~Ly~sl~r~d~~~qv~yYd~GVGt~Gfdavvdvrrrl~~~~~gsmFg~gL~~nI~ 108 (423)
T COG3673 29 SMKRLVFCFDGTWNRFGAQPPTNVVLLYASLQRADGVTQVIYYDEGVGTGGFDAVVDVRRRLEKLSGGSMFGQGLVQNIR 108 (423)
T ss_pred CcceEEEEecCchhhcCCCCcchHHHHHHHHhcCCCceEEEEecCCcccccchhhHHHHHhhhhhhhHHHHHHHHHHHHH
Confidence 45677777777543322 222345566655 5788888888888754211 000000133466788
Q ss_pred HHHHHHHhhhhcCCceEEEEEeccchHHHHHHHh
Q 026555 98 NHFTSICEKEENKEKMRYLLGESMGGAMVLLLHR 131 (237)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~ 131 (237)
.+.+++....+ ...+|+++|+|-|+.++--+|.
T Consensus 109 ~AYrFL~~~ye-pGD~Iy~FGFSRGAf~aRVlag 141 (423)
T COG3673 109 EAYRFLIFNYE-PGDEIYAFGFSRGAFSARVLAG 141 (423)
T ss_pred HHHHHHHHhcC-CCCeEEEeeccchhHHHHHHHH
Confidence 88888743222 4678999999999999877765
No 240
>COG0529 CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism]
Probab=85.39 E-value=12 Score=27.32 Aligned_cols=62 Identities=19% Similarity=0.247 Sum_probs=41.2
Q ss_pred CcEEEEEEcCCCCCCcCch-HHHHHHHHhcCCEEEEeecC--CCCCCCCCCCCcCChhhHHHHHHHHH
Q 026555 36 PKALIFICHGYAMECSIGM-NSTAIRLANEGYACYGIDYQ--GHGKSAGLSGYIDNFDDLVDDCFNHF 100 (237)
Q Consensus 36 ~~~~iv~~hG~~~~~~~~~-~~~~~~l~~~g~~v~~~d~~--g~G~s~~~~~~~~~~~~~~~d~~~~~ 100 (237)
.++.+|++-|..++...-+ ..+.+.|.+.|++++..|-- -||.+.... ++.++-.+++..+.
T Consensus 21 ~~~~viW~TGLSGsGKSTiA~ale~~L~~~G~~~y~LDGDnvR~gL~~dLg---Fs~edR~eniRRva 85 (197)
T COG0529 21 QKGAVIWFTGLSGSGKSTIANALEEKLFAKGYHVYLLDGDNVRHGLNRDLG---FSREDRIENIRRVA 85 (197)
T ss_pred CCCeEEEeecCCCCCHHHHHHHHHHHHHHcCCeEEEecChhHhhcccCCCC---CChHHHHHHHHHHH
Confidence 3678999999999888442 35678888899999999843 256554322 34445455554433
No 241
>PRK02399 hypothetical protein; Provisional
Probab=81.29 E-value=24 Score=29.40 Aligned_cols=101 Identities=14% Similarity=0.089 Sum_probs=61.4
Q ss_pred EEEcCCCCCCcCchHHHHHHHHhcCCEEEEeecCCCCCCCCCC-----------C----Cc-------CChhhHHHHHHH
Q 026555 41 FICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLS-----------G----YI-------DNFDDLVDDCFN 98 (237)
Q Consensus 41 v~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~-----------~----~~-------~~~~~~~~d~~~ 98 (237)
|++=|...+....+..+.+.+.+.|..|+.+|.-..|...... . .. ..++.+.+-+..
T Consensus 6 I~iigT~DTK~~E~~yl~~~i~~~g~~v~~iDv~~~~~p~~~~dis~~~Va~~~g~~~~~~~~~~dRg~ai~~M~~ga~~ 85 (406)
T PRK02399 6 IYIAGTLDTKGEELAYVKDLIEAAGLEVVTVDVSGLGEPPFEPDISAEEVAEAAGDGIEAVFCGGDRGSAMAAMAEGAAA 85 (406)
T ss_pred EEEEeccCCcHHHHHHHHHHHHHCCCceEEEecCCCCCCCCCCCCCHHHHHHHcCCCHHHhhcCccHHHHHHHHHHHHHH
Confidence 4455555555545467778888889999999984333211000 0 00 011222233333
Q ss_pred HHHHHHhhhhcCCceEEEEEeccchHHHHHHHhcCCCcccEEEEc
Q 026555 99 HFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLV 143 (237)
Q Consensus 99 ~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~~~~vl~ 143 (237)
+++.+ .++....-++-+|-|.|..++...++..|--+-+++..
T Consensus 86 ~v~~L--~~~g~i~gviglGGs~GT~lat~aMr~LPiG~PKlmVS 128 (406)
T PRK02399 86 FVREL--YERGDVAGVIGLGGSGGTALATPAMRALPIGVPKLMVS 128 (406)
T ss_pred HHHHH--HhcCCccEEEEecCcchHHHHHHHHHhCCCCCCeEEEE
Confidence 44333 34445778999999999999999999888666666654
No 242
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=79.86 E-value=21 Score=29.38 Aligned_cols=89 Identities=15% Similarity=0.083 Sum_probs=55.8
Q ss_pred CcEEEEEEcCCCCC-------CcCchHHHHHHHHhcCCEEEEeecCCCCCCCCCCCCcCChhhHHHHHHHHHHHHHhhhh
Q 026555 36 PKALIFICHGYAME-------CSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEKEE 108 (237)
Q Consensus 36 ~~~~iv~~hG~~~~-------~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 108 (237)
+...||++||..-+ .+.| ..+.+.+.++|+ +-.+|.--+|..++ +++-+.-+..++...
T Consensus 170 ~~~~vvLLH~CcHNPTG~D~t~~qW-~~l~~~~~~r~l-ip~~D~AYQGF~~G-------leeDa~~lR~~a~~~----- 235 (396)
T COG1448 170 PEGSVVLLHGCCHNPTGIDPTEEQW-QELADLIKERGL-IPFFDIAYQGFADG-------LEEDAYALRLFAEVG----- 235 (396)
T ss_pred CCCCEEEEecCCCCCCCCCCCHHHH-HHHHHHHHHcCC-eeeeehhhhhhccc-------hHHHHHHHHHHHHhC-----
Confidence 35579999986422 3346 888999988876 55567655554432 233333444444322
Q ss_pred cCCceEEEEEeccchHHHHHHHhcCCCcccEEEEcCCcc
Q 026555 109 NKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMC 147 (237)
Q Consensus 109 ~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~~~~vl~~~~~ 147 (237)
+-.++..|..-...++ .++|-++.+++...
T Consensus 236 ----~~~lva~S~SKnfgLY-----gERVGa~~vva~~~ 265 (396)
T COG1448 236 ----PELLVASSFSKNFGLY-----GERVGALSVVAEDA 265 (396)
T ss_pred ----CcEEEEehhhhhhhhh-----hhccceeEEEeCCH
Confidence 2278888877666654 78898888886544
No 243
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=79.31 E-value=16 Score=30.12 Aligned_cols=36 Identities=14% Similarity=0.004 Sum_probs=29.9
Q ss_pred hcCCceEEEEEeccchHHHHHHHhcCCCcccEEEEcC
Q 026555 108 ENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVA 144 (237)
Q Consensus 108 ~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~~~~vl~~ 144 (237)
....+++++.|.|-=|..+...|+ ...+|++++-+.
T Consensus 168 ~~~i~~FvV~GaSKRGWTtWltaa-~D~RV~aivP~V 203 (367)
T PF10142_consen 168 GVNIEKFVVTGASKRGWTTWLTAA-VDPRVKAIVPIV 203 (367)
T ss_pred CCCccEEEEeCCchHhHHHHHhhc-cCcceeEEeeEE
Confidence 346889999999999999999988 456788888763
No 244
>PF06792 UPF0261: Uncharacterised protein family (UPF0261); InterPro: IPR008322 The proteins in this entry are functionally uncharacterised.
Probab=78.96 E-value=27 Score=29.14 Aligned_cols=101 Identities=16% Similarity=0.087 Sum_probs=61.9
Q ss_pred EEEEcCCCCCCcCchHHHHHHHHhcCCEEEEeecCCCCCCCCCCC---------------C-------cCChhhHHHHHH
Q 026555 40 IFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSG---------------Y-------IDNFDDLVDDCF 97 (237)
Q Consensus 40 iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~---------------~-------~~~~~~~~~d~~ 97 (237)
|+++ |...+....+..+.+.+.+.|..++.+|.-=.+.+..... . ...++.+.+-+.
T Consensus 4 I~ii-gT~DTK~~E~~yl~~~i~~~G~~v~~iDvg~~~~~~~~~di~~~eVa~~~g~~~~~~~~~~dRg~ai~~M~~ga~ 82 (403)
T PF06792_consen 4 IAII-GTLDTKGEELLYLRDQIEAQGVEVLLIDVGTLGEPSFPPDISREEVARAAGDSIEAVRSSGDRGEAIEAMARGAA 82 (403)
T ss_pred EEEE-EccCCCHHHHHHHHHHHHHCCCcEEEEEcCCCCCCCCCCCcCHHHHHHhcCCChHHhhccCCHHHHHHHHHHHHH
Confidence 4444 4444444444778888888999999999744443321100 0 001122233333
Q ss_pred HHHHHHHhhhhcCCceEEEEEeccchHHHHHHHhcCCCcccEEEEc
Q 026555 98 NHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLV 143 (237)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~~~~vl~ 143 (237)
.++..+ ..+....-++-+|-|.|..++....+..|--+-+++..
T Consensus 83 ~~v~~l--~~~g~i~Gvi~~GGs~GT~lat~aMr~LPiG~PKlmVS 126 (403)
T PF06792_consen 83 RFVSDL--YDEGKIDGVIGIGGSGGTALATAAMRALPIGFPKLMVS 126 (403)
T ss_pred HHHHHH--HhcCCccEEEEecCCccHHHHHHHHHhCCCCCCeEEEE
Confidence 444444 33344677899999999999999999888666666664
No 245
>KOG2521 consensus Uncharacterized conserved protein [Function unknown]
Probab=78.84 E-value=14 Score=30.17 Aligned_cols=106 Identities=11% Similarity=0.029 Sum_probs=61.1
Q ss_pred EEEEEcCCCCCCcCchHHHHHHHHhcCCEEEEeecCCCCCCCCCCCCcCChhhHHHHHHHHHHHHHhhhhcCCceEEEEE
Q 026555 39 LIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEKEENKEKMRYLLG 118 (237)
Q Consensus 39 ~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~G 118 (237)
+||.+=||.+..+.+.........+.||.++.+-.|-+-..........+.....+-+..++... +.+..++++.-
T Consensus 40 ~Iv~~~gWag~~~r~l~ky~~~Yq~~g~~~~~~tap~~~~~~~~s~~~~sl~~~~~~l~~L~~~~----~~~~~pi~fh~ 115 (350)
T KOG2521|consen 40 PIVVLLGWAGAIDRNLMKYSKIYQDKGYIVVRITAPCPSVFLSASRRILSLSLASTRLSELLSDY----NSDPCPIIFHV 115 (350)
T ss_pred cEEEEeeeccccchhHHHHHHHHhcCCceEEEecCcccccccccccccchhhHHHHHHHHHhhhc----cCCcCceEEEE
Confidence 46666666666665766777777778999988777654333222111123333333333333322 24677899999
Q ss_pred eccchHHHHHHH---hc-C-C---CcccEEEEcCCccc
Q 026555 119 ESMGGAMVLLLH---RK-K-P---DYFDGAVLVAPMCK 148 (237)
Q Consensus 119 ~S~Gg~~a~~~a---~~-~-p---~~~~~~vl~~~~~~ 148 (237)
+|+||...+... .. . | +...+++..+.+..
T Consensus 116 FS~ng~~~~~si~~~~~~~~~~~~~~~~~~~fdS~p~~ 153 (350)
T KOG2521|consen 116 FSGNGVRLMYSISLQLIKHEPKAAQLSGGIIFDSAPAR 153 (350)
T ss_pred ecCCceeehHHHHHHHhhcCchhHhhcCCceEeccccc
Confidence 999996655333 21 2 2 34666777665554
No 246
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=76.74 E-value=28 Score=28.71 Aligned_cols=36 Identities=17% Similarity=0.026 Sum_probs=26.5
Q ss_pred EEEEcCCCCCCcCchHHHHHHHHhcCCEEEEeecCCCCC
Q 026555 40 IFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGK 78 (237)
Q Consensus 40 iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~ 78 (237)
|+|+|.... ..| +.+++.|.+.|+.|.++-..+.+.
T Consensus 2 il~~~~~~p--~~~-~~la~~L~~~G~~v~~~~~~~~~~ 37 (396)
T cd03818 2 ILFVHQNFP--GQF-RHLAPALAAQGHEVVFLTEPNAAP 37 (396)
T ss_pred EEEECCCCc--hhH-HHHHHHHHHCCCEEEEEecCCCCC
Confidence 788886332 225 899999999999998876665543
No 247
>COG4822 CbiK Cobalamin biosynthesis protein CbiK, Co2+ chelatase [Coenzyme metabolism]
Probab=74.70 E-value=33 Score=25.89 Aligned_cols=41 Identities=15% Similarity=0.292 Sum_probs=28.4
Q ss_pred CCcEEEEEEcCCCCCCcCchHHHHHHHHhcCC-EEEEeecCC
Q 026555 35 EPKALIFICHGYAMECSIGMNSTAIRLANEGY-ACYGIDYQG 75 (237)
Q Consensus 35 ~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~-~v~~~d~~g 75 (237)
+..-+|+++||...++...+.-+--.+.+.|| +|+....-|
T Consensus 136 k~e~~vlmgHGt~h~s~~~YacLd~~~~~~~f~~v~v~~ve~ 177 (265)
T COG4822 136 KDEILVLMGHGTDHHSNAAYACLDHVLDEYGFDNVFVAAVEG 177 (265)
T ss_pred cCeEEEEEecCCCccHHHHHHHHHHHHHhcCCCceEEEEecC
Confidence 55678999999877766554555566777788 666665543
No 248
>COG2830 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=74.20 E-value=9 Score=27.42 Aligned_cols=80 Identities=19% Similarity=0.125 Sum_probs=49.8
Q ss_pred CCcEEEEEEcCCCCCCcCchHHHHHHHHhcCCE-EEEeecCCCCCCCCCCCCcCChhhHHHHHHHHHHHHHhhhhcCCce
Q 026555 35 EPKALIFICHGYAMECSIGMNSTAIRLANEGYA-CYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEKEENKEKM 113 (237)
Q Consensus 35 ~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~-v~~~d~~g~G~s~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 113 (237)
++...||+.-||+.+.... ..+ ...++|. ++++|++..... .++. ....
T Consensus 9 qgd~LIvyFaGwgtpps~v-~HL---ilpeN~dl~lcYDY~dl~ld-------fDfs-------------------Ay~h 58 (214)
T COG2830 9 QGDHLIVYFAGWGTPPSAV-NHL---ILPENHDLLLCYDYQDLNLD-------FDFS-------------------AYRH 58 (214)
T ss_pred CCCEEEEEEecCCCCHHHH-hhc---cCCCCCcEEEEeehhhcCcc-------cchh-------------------hhhh
Confidence 3455899999999876533 332 2233454 467888643211 1111 1246
Q ss_pred EEEEEeccchHHHHHHHhcCCCcccEEEEcCCc
Q 026555 114 RYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPM 146 (237)
Q Consensus 114 ~~l~G~S~Gg~~a~~~a~~~p~~~~~~vl~~~~ 146 (237)
+.++.+|||-.+|-.+....+ .+..+.+++.
T Consensus 59 irlvAwSMGVwvAeR~lqg~~--lksatAiNGT 89 (214)
T COG2830 59 IRLVAWSMGVWVAERVLQGIR--LKSATAINGT 89 (214)
T ss_pred hhhhhhhHHHHHHHHHHhhcc--ccceeeecCC
Confidence 778999999999999888765 5555555443
No 249
>KOG4389 consensus Acetylcholinesterase/Butyrylcholinesterase [Signal transduction mechanisms]
Probab=72.24 E-value=30 Score=29.71 Aligned_cols=128 Identities=19% Similarity=0.145 Sum_probs=62.6
Q ss_pred EEEEEEeecCC-CCCcEEEEEEcCCCCCCcCc-h-HHHHHHHHhcC-CEEEEeecC-C-CCCCC--CCCCCcCChhhHHH
Q 026555 23 KLFTCSWIPQN-QEPKALIFICHGYAMECSIG-M-NSTAIRLANEG-YACYGIDYQ-G-HGKSA--GLSGYIDNFDDLVD 94 (237)
Q Consensus 23 ~l~~~~~~~~~-~~~~~~iv~~hG~~~~~~~~-~-~~~~~~l~~~g-~~v~~~d~~-g-~G~s~--~~~~~~~~~~~~~~ 94 (237)
-+..-.|.|.. .....++|++-|.|--+..- . ..=.+.|+..+ -.|+.+++| | +|.-- +......++. .-
T Consensus 120 CLYlNVW~P~~~p~n~tVlVWiyGGGF~sGt~SLdvYdGk~la~~envIvVs~NYRvG~FGFL~l~~~~eaPGNmG--l~ 197 (601)
T KOG4389|consen 120 CLYLNVWAPAADPYNLTVLVWIYGGGFYSGTPSLDVYDGKFLAAVENVIVVSMNYRVGAFGFLYLPGHPEAPGNMG--LL 197 (601)
T ss_pred ceEEEEeccCCCCCCceEEEEEEcCccccCCcceeeeccceeeeeccEEEEEeeeeeccceEEecCCCCCCCCccc--hH
Confidence 45566677732 23455888888866333311 0 11134555543 344556655 1 22110 1111101221 12
Q ss_pred HHHHHHHHHHh---hhhcCCceEEEEEeccchHH-HHHHHhc-CCCcccEEEEcCCccccccc
Q 026555 95 DCFNHFTSICE---KEENKEKMRYLLGESMGGAM-VLLLHRK-KPDYFDGAVLVAPMCKIAEN 152 (237)
Q Consensus 95 d~~~~~~~~~~---~~~~~~~~~~l~G~S~Gg~~-a~~~a~~-~p~~~~~~vl~~~~~~~~~~ 152 (237)
|-.-+++++.+ ....+.+++.++|.|.|+.- .+++.+- -...+++.|+-|+.......
T Consensus 198 DQqLAl~WV~~Ni~aFGGnp~~vTLFGESAGaASv~aHLlsP~S~glF~raIlQSGS~~~pWA 260 (601)
T KOG4389|consen 198 DQQLALQWVQENIAAFGGNPSRVTLFGESAGAASVVAHLLSPGSRGLFHRAILQSGSLNNPWA 260 (601)
T ss_pred HHHHHHHHHHHhHHHhCCCcceEEEeccccchhhhhheecCCCchhhHHHHHhhcCCCCCCcc
Confidence 33334455421 12446789999999999854 4444331 22458888887666554433
No 250
>PF03283 PAE: Pectinacetylesterase
Probab=71.78 E-value=12 Score=30.66 Aligned_cols=53 Identities=17% Similarity=0.103 Sum_probs=34.5
Q ss_pred HHHHHHHHHHHHhhhhcCCceEEEEEeccchHHHHHHH----hcCCCcccEEEEcCC
Q 026555 93 VDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLH----RKKPDYFDGAVLVAP 145 (237)
Q Consensus 93 ~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a----~~~p~~~~~~vl~~~ 145 (237)
...+.++++.+++..-.+.++++|.|.|.||.-++..+ ...|..++-..+..+
T Consensus 137 ~~i~~avl~~l~~~gl~~a~~vlltG~SAGG~g~~~~~d~~~~~lp~~~~v~~~~Ds 193 (361)
T PF03283_consen 137 YRILRAVLDDLLSNGLPNAKQVLLTGCSAGGLGAILHADYVRDRLPSSVKVKCLSDS 193 (361)
T ss_pred HHHHHHHHHHHHHhcCcccceEEEeccChHHHHHHHHHHHHHHHhccCceEEEeccc
Confidence 45677888887554233568999999999998777544 345654444444333
No 251
>PF14606 Lipase_GDSL_3: GDSL-like Lipase/Acylhydrolase family; PDB: 3SKV_B.
Probab=70.58 E-value=24 Score=25.79 Aligned_cols=66 Identities=12% Similarity=0.103 Sum_probs=39.3
Q ss_pred EEEcCCCCCCcCchHHHHHHHHhcCCEEEEeecCCCCCCCCCCCCcCChhhHHHHHHHHHHHHHhhhhcCCceEEEEEe
Q 026555 41 FICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEKEENKEKMRYLLGE 119 (237)
Q Consensus 41 v~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~G~ 119 (237)
++-=|+++++... ..+++.+++..-.++++|.--- .+.+.+.+.+..+++.+ +..++..|++++-+
T Consensus 36 ~iNLGfsG~~~le-~~~a~~ia~~~a~~~~ld~~~N----------~~~~~~~~~~~~fv~~i--R~~hP~tPIllv~~ 101 (178)
T PF14606_consen 36 VINLGFSGNGKLE-PEVADLIAEIDADLIVLDCGPN----------MSPEEFRERLDGFVKTI--REAHPDTPILLVSP 101 (178)
T ss_dssp EEEEE-TCCCS---HHHHHHHHHS--SEEEEEESHH----------CCTTTHHHHHHHHHHHH--HTT-SSS-EEEEE-
T ss_pred eEeeeecCccccC-HHHHHHHhcCCCCEEEEEeecC----------CCHHHHHHHHHHHHHHH--HHhCCCCCEEEEec
Confidence 4445667776655 6677777776557777775211 24567777888888888 66667778888754
No 252
>PF01583 APS_kinase: Adenylylsulphate kinase; InterPro: IPR002891 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This domain contains an ATP binding P-loop motif [].; GO: 0005524 ATP binding, 0016301 kinase activity, 0016772 transferase activity, transferring phosphorus-containing groups, 0000103 sulfate assimilation; PDB: 1M7H_B 1M7G_B 3CR7_B 1D6J_A 2OFW_G 1X6V_B 1XNJ_A 1XJQ_B 2PEY_A 2PEZ_B ....
Probab=70.05 E-value=27 Score=24.88 Aligned_cols=38 Identities=18% Similarity=0.241 Sum_probs=27.8
Q ss_pred cEEEEEEcCCCCCCcCch-HHHHHHHHhcCCEEEEeecC
Q 026555 37 KALIFICHGYAMECSIGM-NSTAIRLANEGYACYGIDYQ 74 (237)
Q Consensus 37 ~~~iv~~hG~~~~~~~~~-~~~~~~l~~~g~~v~~~d~~ 74 (237)
+|.+|++-|..++...-+ ..+.+.|.+.|+.++..|-.
T Consensus 1 ~g~vIwltGlsGsGKtTlA~~L~~~L~~~g~~~~~LDgD 39 (156)
T PF01583_consen 1 KGFVIWLTGLSGSGKTTLARALERRLFARGIKVYLLDGD 39 (156)
T ss_dssp S-EEEEEESSTTSSHHHHHHHHHHHHHHTTS-EEEEEHH
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHcCCcEEEecCc
Confidence 467999999999888432 45667777889999998743
No 253
>cd01714 ETF_beta The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The beta subunit protein is distantly related to and forms a heterodimer with the alpha subunit.
Probab=69.54 E-value=38 Score=25.25 Aligned_cols=72 Identities=10% Similarity=-0.057 Sum_probs=44.1
Q ss_pred HHHHHHhcCC-EEEEeecCCCCCCCCCCCCcCChhhHHHHHHHHHHHHHhhhhcCCceEEEEEecc----chHHHHHHHh
Q 026555 57 TAIRLANEGY-ACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEKEENKEKMRYLLGESM----GGAMVLLLHR 131 (237)
Q Consensus 57 ~~~~l~~~g~-~v~~~d~~g~G~s~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~----Gg~~a~~~a~ 131 (237)
....+...|. +|+..|.++... ++.+.+++-+.++++.. + ..++++|+|. |..++-.+|.
T Consensus 68 ~~~~l~~~G~d~V~~~~~~~~~~--------~~~e~~a~al~~~i~~~------~-p~lVL~~~t~~~~~grdlaprlAa 132 (202)
T cd01714 68 ALREALAMGADRAILVSDRAFAG--------ADTLATAKALAAAIKKI------G-VDLILTGKQSIDGDTGQVGPLLAE 132 (202)
T ss_pred HHHHHHHcCCCEEEEEecccccC--------CChHHHHHHHHHHHHHh------C-CCEEEEcCCcccCCcCcHHHHHHH
Confidence 3444545565 677766543321 35566666676666554 4 5799999998 7788888877
Q ss_pred cCC-CcccEEEEc
Q 026555 132 KKP-DYFDGAVLV 143 (237)
Q Consensus 132 ~~p-~~~~~~vl~ 143 (237)
+.. ..+..++-+
T Consensus 133 rLga~lvsdv~~l 145 (202)
T cd01714 133 LLGWPQITYVSKI 145 (202)
T ss_pred HhCCCccceEEEE
Confidence 642 234444444
No 254
>PF00448 SRP54: SRP54-type protein, GTPase domain; InterPro: IPR000897 The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the GTPase domain of the 54 kDa SRP54 component, a GTP-binding protein that interacts with the signal sequence when it emerges from the ribosome. SRP54 of the signal recognition particle has a three-domain structure: an N-terminal helical bundle domain, a GTPase domain, and the M-domain that binds the 7s RNA and also binds the signal sequence. The extreme C-terminal region is glycine-rich and lower in complexity and poorly conserved between species. The GTPase domain is evolutionary related to P-loop NTPase domains found in a variety of other proteins []. These proteins include Escherichia coli and Bacillus subtilis ffh protein (P48), which seems to be the prokaryotic counterpart of SRP54; signal recognition particle receptor alpha subunit (docking protein), an integral membrane GTP-binding protein which ensures, in conjunction with SRP, the correct targeting of nascent secretory proteins to the endoplasmic reticulum membrane; bacterial FtsY protein, which is believed to play a similar role to that of the docking protein in eukaryotes; the pilA protein from Neisseria gonorrhoeae, the homologue of ftsY; and bacterial flagellar biosynthesis protein flhF.; GO: 0005525 GTP binding, 0006614 SRP-dependent cotranslational protein targeting to membrane; PDB: 2OG2_A 3B9Q_A 3DM9_B 3DMD_B 3E70_C 3DM5_B 2XXA_C 2J28_9 1ZU5_B 1ZU4_A ....
Probab=66.25 E-value=48 Score=24.55 Aligned_cols=71 Identities=17% Similarity=0.143 Sum_probs=44.5
Q ss_pred HHHHHHhcCCEEEEeecCCCCCCCCCCCCcCChhhHHHHHHHHHHHHHhhhhcCCceEEEEEeccchHHHHHHHhcCC--
Q 026555 57 TAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKP-- 134 (237)
Q Consensus 57 ~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p-- 134 (237)
..+.+.++++.++.+|-+|... .-....+++..+++.+ ....++++=-+..+.-.+..+..+-
T Consensus 75 ~l~~~~~~~~D~vlIDT~Gr~~---------~d~~~~~el~~~~~~~------~~~~~~LVlsa~~~~~~~~~~~~~~~~ 139 (196)
T PF00448_consen 75 ALEKFRKKGYDLVLIDTAGRSP---------RDEELLEELKKLLEAL------NPDEVHLVLSATMGQEDLEQALAFYEA 139 (196)
T ss_dssp HHHHHHHTTSSEEEEEE-SSSS---------THHHHHHHHHHHHHHH------SSSEEEEEEEGGGGGHHHHHHHHHHHH
T ss_pred HHHHHhhcCCCEEEEecCCcch---------hhHHHHHHHHHHhhhc------CCccceEEEecccChHHHHHHHHHhhc
Confidence 3455566789999999987652 3345677788877776 5556666655555555554443321
Q ss_pred CcccEEEE
Q 026555 135 DYFDGAVL 142 (237)
Q Consensus 135 ~~~~~~vl 142 (237)
-.++++|+
T Consensus 140 ~~~~~lIl 147 (196)
T PF00448_consen 140 FGIDGLIL 147 (196)
T ss_dssp SSTCEEEE
T ss_pred ccCceEEE
Confidence 23788887
No 255
>COG2240 PdxK Pyridoxal/pyridoxine/pyridoxamine kinase [Coenzyme metabolism]
Probab=65.87 E-value=37 Score=26.79 Aligned_cols=89 Identities=15% Similarity=0.131 Sum_probs=44.5
Q ss_pred HHHHHHHhcCCEEEEe------ecCCCCCCCCCCCCcCChhhHHHHHHHHHHHHHhhhhcCCceEEEEEeccch----HH
Q 026555 56 STAIRLANEGYACYGI------DYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEKEENKEKMRYLLGESMGG----AM 125 (237)
Q Consensus 56 ~~~~~l~~~g~~v~~~------d~~g~G~s~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg----~~ 125 (237)
.-...+...|++|++. +++|||...+... .. +++.++++.+........-..++-|+=-.+ .+
T Consensus 19 AA~f~lq~~G~~V~~vpTV~fSnHtgyg~~~g~v~----~~---e~l~~~l~~l~~~~~~~~~davltGYlgs~~qv~~i 91 (281)
T COG2240 19 AAIFPLQRLGLDVWAVPTVQFSNHTGYGKWTGIVM----PP---EQLADLLNGLEAIDKLGECDAVLTGYLGSAEQVRAI 91 (281)
T ss_pred hHHHHHHHcCCceeeeceEEecCCCCCCCCCCcCC----CH---HHHHHHHHHHHhcccccccCEEEEccCCCHHHHHHH
Confidence 3345566678877654 6888888654322 22 233333333311112233467777773222 22
Q ss_pred HHHHHhcCCCcccEEEEcCCcccccc
Q 026555 126 VLLLHRKKPDYFDGAVLVAPMCKIAE 151 (237)
Q Consensus 126 a~~~a~~~p~~~~~~vl~~~~~~~~~ 151 (237)
+-.+.+-....-+.++++.|...-..
T Consensus 92 ~~~v~~vk~~~P~~~~l~DPVMGD~g 117 (281)
T COG2240 92 AGIVKAVKEANPNALYLCDPVMGDPG 117 (281)
T ss_pred HHHHHHHhccCCCeEEEeCCcccCCC
Confidence 22222222223446788888766544
No 256
>TIGR02884 spore_pdaA delta-lactam-biosynthetic de-N-acetylase. Muramic delta-lactam is an unusual constituent of peptidoglycan, found only in bacterial spores in the peptidoglycan wall, or spore cortex. The proteins in this family are PdaA (yfjS), a member of a larger family of polysaccharide deacetylases, and are specificially involved in delta-lactam biosynthesis. PdaA acts immediately after CwlD, an N-acetylmuramoyl-L-alanine amidase and performs a de-N-acetylation. PdaA may also perform the following transpeptidation for lactam ring formation, as heterologous expression in E. coli of CwlD and PdaA together is sufficient for delta-lactam production.
Probab=62.53 E-value=8.1 Score=29.29 Aligned_cols=35 Identities=17% Similarity=0.373 Sum_probs=25.1
Q ss_pred EEEEEEcCCCCCCcCchHHHHHHHHhcCCEEEEee
Q 026555 38 ALIFICHGYAMECSIGMNSTAIRLANEGYACYGID 72 (237)
Q Consensus 38 ~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d 72 (237)
+.||++|.........+..+.+.|.++||+++.++
T Consensus 187 g~IiLlHd~~~~t~~aL~~ii~~lk~~Gy~fvtl~ 221 (224)
T TIGR02884 187 GAILLLHAVSKDNAEALDKIIKDLKEQGYTFKSLD 221 (224)
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEhH
Confidence 46999997533222234788999999999988764
No 257
>PRK12467 peptide synthase; Provisional
Probab=62.33 E-value=96 Score=34.53 Aligned_cols=97 Identities=14% Similarity=0.034 Sum_probs=61.6
Q ss_pred cEEEEEEcCCCCCCcCchHHHHHHHHhcCCEEEEeecCCCCCCCCCCCCcCChhhHHHHHHHHHHHHHhhhhcCCceEEE
Q 026555 37 KALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEKEENKEKMRYL 116 (237)
Q Consensus 37 ~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l 116 (237)
.+.++..|........+ ..+...+.. +..++.+..++.-.. +. ...++..++....+.+.+. ....+..+
T Consensus 3692 ~~~l~~~h~~~r~~~~~-~~l~~~l~~-~~~~~~l~~~~~~~d-~~--~~~~~~~~~~~y~~~~~~~-----~~~~p~~l 3761 (3956)
T PRK12467 3692 FPALFCRHEGLGTVFDY-EPLAVILEG-DRHVLGLTCRHLLDD-GW--QDTSLQAMAVQYADYILWQ-----QAKGPYGL 3761 (3956)
T ss_pred ccceeeechhhcchhhh-HHHHHHhCC-CCcEEEEeccccccc-cC--CccchHHHHHHHHHHHHHh-----ccCCCeee
Confidence 45699999887776655 677777754 366777776543211 11 1135566666666666554 14568999
Q ss_pred EEeccchHHHHHHHhc---CCCcccEEEEc
Q 026555 117 LGESMGGAMVLLLHRK---KPDYFDGAVLV 143 (237)
Q Consensus 117 ~G~S~Gg~~a~~~a~~---~p~~~~~~vl~ 143 (237)
.|+|+||.++..++.+ ..+.+.-+.++
T Consensus 3762 ~g~s~g~~~a~~~~~~l~~~g~~~~~~~~~ 3791 (3956)
T PRK12467 3762 LGWSLGGTLARLVAELLEREGESEAFLGLF 3791 (3956)
T ss_pred eeeecchHHHHHHHHHHHHcCCceeEEEEE
Confidence 9999999999887754 33445544444
No 258
>COG3340 PepE Peptidase E [Amino acid transport and metabolism]
Probab=61.06 E-value=31 Score=26.02 Aligned_cols=37 Identities=11% Similarity=0.058 Sum_probs=29.7
Q ss_pred cEEEEEEcCCCCCCcC--chHHHHHHHHhcCCEEEEeec
Q 026555 37 KALIFICHGYAMECSI--GMNSTAIRLANEGYACYGIDY 73 (237)
Q Consensus 37 ~~~iv~~hG~~~~~~~--~~~~~~~~l~~~g~~v~~~d~ 73 (237)
++.|.|++--+.+... |.....+.|.+.|+.+...++
T Consensus 32 ~~~i~FIPtAs~~~~~~~Yv~k~~~~l~~lg~~v~~L~l 70 (224)
T COG3340 32 RKTIAFIPTASVDSEDDFYVEKVRNALAKLGLEVSELHL 70 (224)
T ss_pred CceEEEEecCccccchHHHHHHHHHHHHHcCCeeeeeec
Confidence 5689999988777775 656788899999998887775
No 259
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=59.75 E-value=49 Score=27.68 Aligned_cols=102 Identities=21% Similarity=0.241 Sum_probs=59.7
Q ss_pred CCcEEEEEEcCCCCCCcCchHHHHHHHHhcCCEEEEeecCCCCCCCCCCCC-----cCChhhHHHHHHHHHHHHHhhhhc
Q 026555 35 EPKALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSGY-----IDNFDDLVDDCFNHFTSICEKEEN 109 (237)
Q Consensus 35 ~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~-----~~~~~~~~~d~~~~~~~~~~~~~~ 109 (237)
.+...++++---.+....- .+.++.+.+.|+-|+-.|..++=......+. .++++.+.+++......-
T Consensus 46 ~~~~~villSd~~G~~d~~-~s~a~al~~~~Alv~~vd~~~ylaaL~~dd~ecvylisd~Ealsr~~Qr~a~~g------ 118 (456)
T COG3946 46 DPQGLVILLSDEAGIGDQE-RSRADALLARGALVAPVDLGAYLAALGADDNECVYLISDFEALSREAQRAADLG------ 118 (456)
T ss_pred CcceeeEEEEcccChhhhh-cchhHHHhhcCCeeeccccchhhhccccCCCcceEEehhHHHHhHHHHHHhhcc------
Confidence 4455666665544444434 4667888888999998998776333222211 123444444433332211
Q ss_pred CCceEEEEEeccchHHHHHHHhcCCCc-ccEEEEc
Q 026555 110 KEKMRYLLGESMGGAMVLLLHRKKPDY-FDGAVLV 143 (237)
Q Consensus 110 ~~~~~~l~G~S~Gg~~a~~~a~~~p~~-~~~~vl~ 143 (237)
....-++.|--.||.+++..+++-|+. +.+.+..
T Consensus 119 ~yr~PVl~g~g~Gg~~A~asaaqSp~atlag~Vsl 153 (456)
T COG3946 119 VYRLPVLTGPGQGGTLAYASAAQSPDATLAGAVSL 153 (456)
T ss_pred CcccceEeecCCCcHHHHHHHhhChhhhhcCccCC
Confidence 334567888999999999988876643 3344433
No 260
>PF08484 Methyltransf_14: C-methyltransferase C-terminal domain; InterPro: IPR013691 This domain is found in bacterial C-methyltransferase proteins, often together with other methyltransferase domains such as IPR013216 from INTERPRO or IPR013217 from INTERPRO. ; PDB: 4E2X_A 3NDJ_A 3NDI_A 4E32_A 4E33_A 4E31_A 4E2Y_A 4E2W_A 4E2Z_A 4E30_A.
Probab=59.23 E-value=40 Score=24.14 Aligned_cols=37 Identities=22% Similarity=0.147 Sum_probs=21.8
Q ss_pred CCceEEEEEeccchHHHHHHHhcCCCcccEEEEcCCc
Q 026555 110 KEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPM 146 (237)
Q Consensus 110 ~~~~~~l~G~S~Gg~~a~~~a~~~p~~~~~~vl~~~~ 146 (237)
..+++.++|-|..|...+.++...++.+..++=.+|.
T Consensus 67 ~gk~I~~yGA~~kg~tlln~~g~~~~~I~~vvD~np~ 103 (160)
T PF08484_consen 67 EGKRIAGYGAGAKGNTLLNYFGLDNDLIDYVVDDNPL 103 (160)
T ss_dssp TT--EEEE---SHHHHHHHHHT--TTTS--EEES-GG
T ss_pred cCCEEEEECcchHHHHHHHHhCCCcceeEEEEeCChh
Confidence 5688999999999999999998877777777665543
No 261
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=59.21 E-value=62 Score=26.00 Aligned_cols=26 Identities=19% Similarity=0.239 Sum_probs=21.3
Q ss_pred HHHHHHHHhcCCEEEEeecCCCCCCC
Q 026555 55 NSTAIRLANEGYACYGIDYQGHGKSA 80 (237)
Q Consensus 55 ~~~~~~l~~~g~~v~~~d~~g~G~s~ 80 (237)
+.....|.+.||.|+++|-...|...
T Consensus 14 SHtv~~Ll~~G~~vvV~DNL~~g~~~ 39 (329)
T COG1087 14 SHTVRQLLKTGHEVVVLDNLSNGHKI 39 (329)
T ss_pred HHHHHHHHHCCCeEEEEecCCCCCHH
Confidence 56788888999999999988776544
No 262
>KOG0781 consensus Signal recognition particle receptor, alpha subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=58.96 E-value=54 Score=28.14 Aligned_cols=88 Identities=20% Similarity=0.278 Sum_probs=54.7
Q ss_pred EEEcCCCCCCcCchHHHHHHHHhcCCEEEEeecCCCCCCCCCCCCcCChhhHHHHHHHHHHHHHhhhhcCCceEEEEEec
Q 026555 41 FICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEKEENKEKMRYLLGES 120 (237)
Q Consensus 41 v~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S 120 (237)
+|=-|+|.+...-...-...-.+.||.|+.+|--|.= .+-..+...+..+++.- .+..++.+|..
T Consensus 442 lfekGYgkd~a~vak~AI~~a~~~gfDVvLiDTAGR~---------~~~~~lm~~l~k~~~~~------~pd~i~~vgea 506 (587)
T KOG0781|consen 442 LFEKGYGKDAAGVAKEAIQEARNQGFDVVLIDTAGRM---------HNNAPLMTSLAKLIKVN------KPDLILFVGEA 506 (587)
T ss_pred HHhhhcCCChHHHHHHHHHHHHhcCCCEEEEeccccc---------cCChhHHHHHHHHHhcC------CCceEEEehhh
Confidence 3445666664422233344555569999999975432 12234455565665544 67889999999
Q ss_pred cchHHHHHHHhc---------CCCcccEEEEc
Q 026555 121 MGGAMVLLLHRK---------KPDYFDGAVLV 143 (237)
Q Consensus 121 ~Gg~~a~~~a~~---------~p~~~~~~vl~ 143 (237)
+-|.=++..+.. .|..++++++-
T Consensus 507 lvg~dsv~q~~~fn~al~~~~~~r~id~~~lt 538 (587)
T KOG0781|consen 507 LVGNDSVDQLKKFNRALADHSTPRLIDGILLT 538 (587)
T ss_pred hhCcHHHHHHHHHHHHHhcCCCccccceEEEE
Confidence 888777755543 35568888874
No 263
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=58.28 E-value=40 Score=20.80 Aligned_cols=45 Identities=13% Similarity=0.081 Sum_probs=29.0
Q ss_pred hhhHHHHHHHHHHHHHhhhh-cCCceEEEEEeccchHHHHHHHhcC
Q 026555 89 FDDLVDDCFNHFTSICEKEE-NKEKMRYLLGESMGGAMVLLLHRKK 133 (237)
Q Consensus 89 ~~~~~~d~~~~~~~~~~~~~-~~~~~~~l~G~S~Gg~~a~~~a~~~ 133 (237)
......++.+-++++.++.. .+.+++.++|-|-|=.+|...+..+
T Consensus 16 P~GC~~~V~~qI~yvk~~~~~~GpK~VLViGaStGyGLAsRIa~aF 61 (78)
T PF12242_consen 16 PVGCARNVENQIEYVKSQGKINGPKKVLVIGASTGYGLASRIAAAF 61 (78)
T ss_dssp HHHHHHHHHHHHHHHHHC---TS-SEEEEES-SSHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHhcCCCCCCceEEEEecCCcccHHHHHHHHh
Confidence 45566677777777744222 3457899999999987777666543
No 264
>PRK05282 (alpha)-aspartyl dipeptidase; Validated
Probab=58.11 E-value=60 Score=24.90 Aligned_cols=38 Identities=16% Similarity=-0.032 Sum_probs=27.5
Q ss_pred cEEEEEEcCCC--CCCcCchHHHHHHHHhcCCEEEEeecC
Q 026555 37 KALIFICHGYA--MECSIGMNSTAIRLANEGYACYGIDYQ 74 (237)
Q Consensus 37 ~~~iv~~hG~~--~~~~~~~~~~~~~l~~~g~~v~~~d~~ 74 (237)
.+.|+|++=-. .+...|.+.+...|.+.|+.+..++..
T Consensus 31 ~~~v~fIPtAs~~~~~~~y~~~~~~af~~lG~~v~~l~~~ 70 (233)
T PRK05282 31 RRKAVFIPYAGVTQSWDDYTAKVAEALAPLGIEVTGIHRV 70 (233)
T ss_pred CCeEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEeccc
Confidence 45699998755 333445567778888889998877765
No 265
>PF13207 AAA_17: AAA domain; PDB: 3AKC_A 3AKE_A 3AKD_A 2QL6_G 2QT1_A 2QSZ_A 2QSY_A 2QT0_A 2QG6_A 2P0E_A ....
Probab=57.59 E-value=15 Score=24.27 Aligned_cols=31 Identities=23% Similarity=0.335 Sum_probs=25.5
Q ss_pred EEEEcCCCCCCcCchHHHHHHHHhc-CCEEEEeec
Q 026555 40 IFICHGYAMECSIGMNSTAIRLANE-GYACYGIDY 73 (237)
Q Consensus 40 iv~~hG~~~~~~~~~~~~~~~l~~~-g~~v~~~d~ 73 (237)
+|++-|.++++. ..+++.|++. |+.++..|-
T Consensus 1 vI~I~G~~gsGK---ST~a~~La~~~~~~~i~~d~ 32 (121)
T PF13207_consen 1 VIIISGPPGSGK---STLAKELAERLGFPVISMDD 32 (121)
T ss_dssp EEEEEESTTSSH---HHHHHHHHHHHTCEEEEEHH
T ss_pred CEEEECCCCCCH---HHHHHHHHHHHCCeEEEecc
Confidence 578888888877 6778888886 899888887
No 266
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=57.43 E-value=16 Score=28.74 Aligned_cols=39 Identities=31% Similarity=0.294 Sum_probs=28.0
Q ss_pred CceEEEEEeccchHHHHHHH---hcCCCcccEEEEcCCcccc
Q 026555 111 EKMRYLLGESMGGAMVLLLH---RKKPDYFDGAVLVAPMCKI 149 (237)
Q Consensus 111 ~~~~~l~G~S~Gg~~a~~~a---~~~p~~~~~~vl~~~~~~~ 149 (237)
-.++++.|.|+|+.-+...- ...-+.+++.++.+|+...
T Consensus 108 RPkL~l~GeSLGa~g~~~af~~~~~~~~~vdGalw~GpP~~s 149 (289)
T PF10081_consen 108 RPKLYLYGESLGAYGGEAAFDGLDDLRDRVDGALWVGPPFFS 149 (289)
T ss_pred CCeEEEeccCccccchhhhhccHHHhhhhcceEEEeCCCCCC
Confidence 35799999999986665432 2334669999999887543
No 267
>cd03146 GAT1_Peptidase_E Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Peptidase E is believed to be a serine peptidase having a Ser-His-Glu catalytic triad which differs from the Cys-His-Glu catalytic triad typical of GATase1 domains by having a Ser in place of the reactive Cys at the nucleophile elbow. Xenopus PepE is developmentally regulated in response to thyroid hormone and, it is thought to play a role in apoptosis during tail reabsorption.
Probab=57.34 E-value=53 Score=24.62 Aligned_cols=86 Identities=9% Similarity=-0.020 Sum_probs=49.6
Q ss_pred CcEEEEEEcCCCCCCcCchHHHHHHHHhc-CCEEEEeecCCCCCCC-C----CCCCc----CChhhHHHHHH-----HHH
Q 026555 36 PKALIFICHGYAMECSIGMNSTAIRLANE-GYACYGIDYQGHGKSA-G----LSGYI----DNFDDLVDDCF-----NHF 100 (237)
Q Consensus 36 ~~~~iv~~hG~~~~~~~~~~~~~~~l~~~-g~~v~~~d~~g~G~s~-~----~~~~~----~~~~~~~~d~~-----~~~ 100 (237)
..+.|++++--......+...+.+.|.+. |+.+...+... ... . ...-. .+...+.+.+. +++
T Consensus 30 ~~~~i~~IptAs~~~~~~~~~~~~a~~~l~G~~~~~~~~~~--~~~~~~~l~~ad~I~l~GG~~~~~~~~l~~~~l~~~l 107 (212)
T cd03146 30 ARPKVLFVPTASGDRDEYTARFYAAFESLRGVEVSHLHLFD--TEDPLDALLEADVIYVGGGNTFNLLAQWREHGLDAIL 107 (212)
T ss_pred CCCeEEEECCCCCCHHHHHHHHHHHHhhccCcEEEEEeccC--cccHHHHHhcCCEEEECCchHHHHHHHHHHcCHHHHH
Confidence 35668999876665555657788899999 99988877543 111 0 00000 11222222222 222
Q ss_pred HHHHhhhhcCCceEEEEEeccchHHHHHH
Q 026555 101 TSICEKEENKEKMRYLLGESMGGAMVLLL 129 (237)
Q Consensus 101 ~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~ 129 (237)
+.. -.+...++|.|.|..+....
T Consensus 108 ~~~------~~~g~~i~G~SAGa~i~~~~ 130 (212)
T cd03146 108 KAA------LERGVVYIGWSAGSNCWFPS 130 (212)
T ss_pred HHH------HHCCCEEEEECHhHHhhCCC
Confidence 222 12458899999999988763
No 268
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=57.22 E-value=13 Score=25.49 Aligned_cols=31 Identities=23% Similarity=0.258 Sum_probs=22.6
Q ss_pred CCcEEEEEEcCCCCCCcCchHH-HHHHHHhcC
Q 026555 35 EPKALIFICHGYAMECSIGMNS-TAIRLANEG 65 (237)
Q Consensus 35 ~~~~~iv~~hG~~~~~~~~~~~-~~~~l~~~g 65 (237)
+.+|.|+-+||+.+.+..+... +++.|-..|
T Consensus 50 p~KpLVlSfHG~tGtGKn~v~~liA~~ly~~G 81 (127)
T PF06309_consen 50 PRKPLVLSFHGWTGTGKNFVSRLIAEHLYKSG 81 (127)
T ss_pred CCCCEEEEeecCCCCcHHHHHHHHHHHHHhcc
Confidence 5588999999999999977443 455555554
No 269
>PF05724 TPMT: Thiopurine S-methyltransferase (TPMT); InterPro: IPR008854 This family consists of thiopurine S-methyltransferase proteins from both eukaryotes and prokaryotes. Thiopurine S-methyltransferase (TPMT) is a cytosolic enzyme that catalyses S-methylation of aromatic and heterocyclic sulphydryl compounds, including anticancer and immunosuppressive thiopurines [].; GO: 0008119 thiopurine S-methyltransferase activity, 0008152 metabolic process, 0005737 cytoplasm; PDB: 1PJZ_A 2H11_A 2BZG_A 3LCC_A 3BGD_A 2GB4_A 3BGI_B.
Probab=55.84 E-value=18 Score=27.41 Aligned_cols=29 Identities=21% Similarity=0.304 Sum_probs=22.8
Q ss_pred EEEEEcCCCCCCcCchHHHHHHHHhcCCEEEEeec
Q 026555 39 LIFICHGYAMECSIGMNSTAIRLANEGYACYGIDY 73 (237)
Q Consensus 39 ~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~ 73 (237)
.=+|++|.|.+.. +..|+++||.|+.+|+
T Consensus 39 ~rvLvPgCG~g~D------~~~La~~G~~VvGvDl 67 (218)
T PF05724_consen 39 GRVLVPGCGKGYD------MLWLAEQGHDVVGVDL 67 (218)
T ss_dssp EEEEETTTTTSCH------HHHHHHTTEEEEEEES
T ss_pred CeEEEeCCCChHH------HHHHHHCCCeEEEEec
Confidence 3578899887633 4578889999999997
No 270
>PRK14974 cell division protein FtsY; Provisional
Probab=54.26 E-value=1.2e+02 Score=24.85 Aligned_cols=67 Identities=19% Similarity=0.249 Sum_probs=43.0
Q ss_pred HhcCCEEEEeecCCCCCCCCCCCCcCChhhHHHHHHHHHHHHHhhhhcCCceEEEEEeccchHHHHHHHhcCC--CcccE
Q 026555 62 ANEGYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKP--DYFDG 139 (237)
Q Consensus 62 ~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p--~~~~~ 139 (237)
...|+.++.+|-.|.... -.++.+.+..+.+.+ .+..++++.-+.-|.-+...+..+. -.+.+
T Consensus 219 ~~~~~DvVLIDTaGr~~~---------~~~lm~eL~~i~~~~------~pd~~iLVl~a~~g~d~~~~a~~f~~~~~~~g 283 (336)
T PRK14974 219 KARGIDVVLIDTAGRMHT---------DANLMDELKKIVRVT------KPDLVIFVGDALAGNDAVEQAREFNEAVGIDG 283 (336)
T ss_pred HhCCCCEEEEECCCccCC---------cHHHHHHHHHHHHhh------CCceEEEeeccccchhHHHHHHHHHhcCCCCE
Confidence 345788888887765432 235566666666555 5556777777777777776666543 34777
Q ss_pred EEEc
Q 026555 140 AVLV 143 (237)
Q Consensus 140 ~vl~ 143 (237)
+|+-
T Consensus 284 iIlT 287 (336)
T PRK14974 284 VILT 287 (336)
T ss_pred EEEe
Confidence 7774
No 271
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=54.01 E-value=16 Score=28.87 Aligned_cols=22 Identities=14% Similarity=0.208 Sum_probs=18.5
Q ss_pred CCceEEEEEeccchHHHHHHHh
Q 026555 110 KEKMRYLLGESMGGAMVLLLHR 131 (237)
Q Consensus 110 ~~~~~~l~G~S~Gg~~a~~~a~ 131 (237)
+.++-.++|||+|-+.|+.++.
T Consensus 80 Gi~p~~~~GhSlGE~aA~~~ag 101 (298)
T smart00827 80 GVRPDAVVGHSLGEIAAAYVAG 101 (298)
T ss_pred CCcccEEEecCHHHHHHHHHhC
Confidence 6788999999999988876653
No 272
>TIGR02873 spore_ylxY probable sporulation protein, polysaccharide deacetylase family. Members of this protein family are most closely related to TIGR02764, a subset of polysaccharide deacetylase family proteins found in a species if and only if the species forms endospores like those of Bacillus subtilis or Clostridium tetani. This family is likewise restricted to spore-formers, but is not universal among them in having sequences with full-length matches to the model.
Probab=53.98 E-value=12 Score=29.32 Aligned_cols=34 Identities=15% Similarity=0.183 Sum_probs=25.9
Q ss_pred EEEEEEcCCCCCCcCchHHHHHHHHhcCCEEEEee
Q 026555 38 ALIFICHGYAMECSIGMNSTAIRLANEGYACYGID 72 (237)
Q Consensus 38 ~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d 72 (237)
..||++|....+... +..+.+.|.++||+++.++
T Consensus 231 G~IILmHd~~~T~~a-L~~iI~~Lk~kGy~fvtl~ 264 (268)
T TIGR02873 231 GAMVLMHPTASSTEG-LEEMITIIKEKGYKIGTIT 264 (268)
T ss_pred CcEEEEcCCccHHHH-HHHHHHHHHHCCCEEEeHH
Confidence 458899976555443 4788999999999988764
No 273
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit. Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group.
Probab=53.43 E-value=16 Score=28.88 Aligned_cols=22 Identities=14% Similarity=0.111 Sum_probs=18.3
Q ss_pred CCceEEEEEeccchHHHHHHHh
Q 026555 110 KEKMRYLLGESMGGAMVLLLHR 131 (237)
Q Consensus 110 ~~~~~~l~G~S~Gg~~a~~~a~ 131 (237)
+.++..++|||+|-..|+.++.
T Consensus 74 g~~P~~v~GhS~GE~aAa~~aG 95 (295)
T TIGR03131 74 LPRPSAVAGYSVGEYAAAVVAG 95 (295)
T ss_pred CCCCcEEeecCHHHHHHHHHhC
Confidence 6689999999999988876653
No 274
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2.3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A ....
Probab=53.35 E-value=11 Score=30.20 Aligned_cols=21 Identities=24% Similarity=0.286 Sum_probs=17.9
Q ss_pred CCceEEEEEeccchHHHHHHH
Q 026555 110 KEKMRYLLGESMGGAMVLLLH 130 (237)
Q Consensus 110 ~~~~~~l~G~S~Gg~~a~~~a 130 (237)
+.++-.++|||+|=+.|+.++
T Consensus 82 Gi~P~~v~GhSlGE~aA~~aa 102 (318)
T PF00698_consen 82 GIKPDAVIGHSLGEYAALVAA 102 (318)
T ss_dssp THCESEEEESTTHHHHHHHHT
T ss_pred ccccceeeccchhhHHHHHHC
Confidence 678999999999988887655
No 275
>TIGR02764 spore_ybaN_pdaB polysaccharide deacetylase family sporulation protein PdaB. This model describes the YbaN protein family, also called PdaB and SpoVIE, of Gram-positive bacteria. Although ybaN null mutants have only a mild sporulation defect, ybaN/ytrI double mutants show drastically reducted sporulation efficiencies. This synthetic defect suggests the role of this sigmaE-controlled gene in sporulation had been masked by functional redundancy. Members of this family are homologous to a characterized polysaccharide deacetylase; the exact function this protein family is unknown.
Probab=53.10 E-value=9.2 Score=28.02 Aligned_cols=34 Identities=18% Similarity=0.303 Sum_probs=23.2
Q ss_pred EEEEEEcCCC---CCCcCchHHHHHHHHhcCCEEEEee
Q 026555 38 ALIFICHGYA---MECSIGMNSTAIRLANEGYACYGID 72 (237)
Q Consensus 38 ~~iv~~hG~~---~~~~~~~~~~~~~l~~~g~~v~~~d 72 (237)
+.||++|... .+.. .+..+.+.|.++||+++.++
T Consensus 152 g~Iil~Hd~~~~~~t~~-~l~~~i~~l~~~Gy~~vtl~ 188 (191)
T TIGR02764 152 GDIILLHASDSAKQTVK-ALPTIIKKLKEKGYEFVTIS 188 (191)
T ss_pred CCEEEEeCCCCcHhHHH-HHHHHHHHHHHCCCEEEEHH
Confidence 3599999421 2222 23678899999999988764
No 276
>TIGR02069 cyanophycinase cyanophycinase. This model describes both cytosolic and extracellular cyanophycinases. The former are part of a system in many Cyanobacteria and a few other species of generating and later utilizing a storage polymer for nitrogen, carbon, and energy, called cyanophycin. The latter are found in species such as Pseudomonas anguilliseptica that can use external cyanophycin. The polymer has a backbone of L-aspartic acid, with most Asp side chain carboxyl groups attached to L-arginine.
Probab=50.05 E-value=53 Score=25.44 Aligned_cols=40 Identities=15% Similarity=0.012 Sum_probs=26.2
Q ss_pred CCcEEEEEEcCCCCCCcCchHHHHHHHHhcCCE-EEEeecC
Q 026555 35 EPKALIFICHGYAMECSIGMNSTAIRLANEGYA-CYGIDYQ 74 (237)
Q Consensus 35 ~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~-v~~~d~~ 74 (237)
++.+.|++++--+.....+...+.+.|.+.|+. |-..+.+
T Consensus 26 ~~~~rI~~iptAS~~~~~~~~~~~~~~~~lG~~~v~~l~i~ 66 (250)
T TIGR02069 26 GEDAIIVIITSASEEPREVGERYITIFSRLGVKEVKILDVR 66 (250)
T ss_pred CCCceEEEEeCCCCChHHHHHHHHHHHHHcCCceeEEEecC
Confidence 445679999865544444445677788888884 5556664
No 277
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=49.13 E-value=26 Score=28.11 Aligned_cols=24 Identities=17% Similarity=0.218 Sum_probs=20.5
Q ss_pred CCceEEEEEeccchHHHHHHHhcC
Q 026555 110 KEKMRYLLGESMGGAMVLLLHRKK 133 (237)
Q Consensus 110 ~~~~~~l~G~S~Gg~~a~~~a~~~ 133 (237)
+...-.+.|-|+|+.++..++..+
T Consensus 41 gi~~d~v~GtSaGAi~ga~ya~g~ 64 (306)
T cd07225 41 GIPVDMVGGTSIGAFIGALYAEER 64 (306)
T ss_pred CCCCCEEEEECHHHHHHHHHHcCC
Confidence 566778999999999999998763
No 278
>KOG1252 consensus Cystathionine beta-synthase and related enzymes [Amino acid transport and metabolism]
Probab=48.73 E-value=73 Score=25.94 Aligned_cols=59 Identities=14% Similarity=0.003 Sum_probs=35.4
Q ss_pred eEeecCCcEEEEEEeecCC--CCCcEEEEEEcCCCCCCcCchHHHHHHHHhc--CCEEEEeecCC
Q 026555 15 FILNSRRVKLFTCSWIPQN--QEPKALIFICHGYAMECSIGMNSTAIRLANE--GYACYGIDYQG 75 (237)
Q Consensus 15 ~~~~~~g~~l~~~~~~~~~--~~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~--g~~v~~~d~~g 75 (237)
+|.+..+-..+|....|+- .-.+.+=+|+||.|.-.. - ..+.+++.+. +..|+..|..+
T Consensus 187 Qf~np~Np~~hy~ttg~EI~~q~~g~vDi~V~gaGTGGT-i-tgvGRylke~~~~~kVv~vdp~~ 249 (362)
T KOG1252|consen 187 QFHNPGNPLAHYETTGPEIWRQLDGKVDIFVAGAGTGGT-I-TGVGRYLKEQNPNIKVVGVDPQE 249 (362)
T ss_pred HhcCCCCcccccccccHHHHHHhcCCCCEEEeccCCCce-e-echhHHHHHhCCCCEEEEeCCCc
Confidence 3444555667787776641 123445677787665443 2 4666777665 47788888765
No 279
>PRK13256 thiopurine S-methyltransferase; Reviewed
Probab=48.51 E-value=19 Score=27.39 Aligned_cols=29 Identities=10% Similarity=0.206 Sum_probs=22.3
Q ss_pred EEEEcCCCCCCcCchHHHHHHHHhcCCEEEEeecC
Q 026555 40 IFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQ 74 (237)
Q Consensus 40 iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 74 (237)
=||++|.|.+.. +..|+++||.|+.+|+-
T Consensus 46 rvLvPgCGkg~D------~~~LA~~G~~V~GvDlS 74 (226)
T PRK13256 46 VCLIPMCGCSID------MLFFLSKGVKVIGIELS 74 (226)
T ss_pred eEEEeCCCChHH------HHHHHhCCCcEEEEecC
Confidence 578888776422 46788899999999973
No 280
>PLN02748 tRNA dimethylallyltransferase
Probab=47.94 E-value=1.2e+02 Score=26.03 Aligned_cols=66 Identities=18% Similarity=0.078 Sum_probs=41.6
Q ss_pred CcEEEEEEcCCCCCCcCchHHHHHHHHhc-CCEEEEeec----CCC--C--CCC--------------CCCCCcCChhhH
Q 026555 36 PKALIFICHGYAMECSIGMNSTAIRLANE-GYACYGIDY----QGH--G--KSA--------------GLSGYIDNFDDL 92 (237)
Q Consensus 36 ~~~~iv~~hG~~~~~~~~~~~~~~~l~~~-g~~v~~~d~----~g~--G--~s~--------------~~~~~~~~~~~~ 92 (237)
.++.+|++-|-.++.. ..++..|++. +..++..|- +|. | .-+ -.....++..++
T Consensus 20 ~~~~~i~i~GptgsGK---s~la~~la~~~~~eii~~DsmQVYrgLdIgTaKpt~eE~~~VpHHLid~v~p~e~ysv~~F 96 (468)
T PLN02748 20 GKAKVVVVMGPTGSGK---SKLAVDLASHFPVEIINADSMQVYSGLDVLTNKVPLHEQKGVPHHLLGVISPSVEFTAKDF 96 (468)
T ss_pred CCCCEEEEECCCCCCH---HHHHHHHHHhcCeeEEcCchheeeCCcchhcCCCCHHHHcCCCCeeEeecCCCCcCcHHHH
Confidence 3455778888777666 5667777665 567888772 221 1 111 012233677888
Q ss_pred HHHHHHHHHHHH
Q 026555 93 VDDCFNHFTSIC 104 (237)
Q Consensus 93 ~~d~~~~~~~~~ 104 (237)
.++...+++.+.
T Consensus 97 ~~~A~~~I~~I~ 108 (468)
T PLN02748 97 RDHAVPLIEEIL 108 (468)
T ss_pred HHHHHHHHHHHH
Confidence 889999998873
No 281
>PHA02114 hypothetical protein
Probab=47.65 E-value=32 Score=22.20 Aligned_cols=35 Identities=20% Similarity=0.208 Sum_probs=28.2
Q ss_pred cEEEEEEcCCCCCCcCchHHHHHHHHhcCCEEEEee
Q 026555 37 KALIFICHGYAMECSIGMNSTAIRLANEGYACYGID 72 (237)
Q Consensus 37 ~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d 72 (237)
.++||+=-.+..+...| ..+...|.+.||+|++-.
T Consensus 82 ~gtivldvn~amsr~pw-i~v~s~le~~g~~vvatq 116 (127)
T PHA02114 82 YGTIVLDVNYAMSRAPW-IKVISRLEEAGFNVVATQ 116 (127)
T ss_pred cCeEEEEehhhhccCcH-HHHHHHHHhcCceeeehh
Confidence 45788888888888888 778888988899998743
No 282
>TIGR03709 PPK2_rel_1 polyphosphate:nucleotide phosphotransferase, PPK2 family. Members of this protein family belong to the polyphosphate kinase 2 (PPK2) family, which is not related in sequence to PPK1. While PPK1 tends to act in the biosynthesis of polyphosphate, or poly(P), members of the PPK2 family tend to use the terminal phosphate of poly(P) to regenerate ATP or GTP from the corresponding nucleoside diphosphate, or ADP from AMP as is the case with polyphosphate:AMP phosphotransferase (PAP). Members of this protein family most likely transfer the terminal phosphate between poly(P) and some nucleotide, but it is not clear which.
Probab=47.61 E-value=23 Score=27.65 Aligned_cols=39 Identities=8% Similarity=0.170 Sum_probs=28.9
Q ss_pred CcEEEEEEcCCCCCCcCc-hHHHHHHHHhcCCEEEEeecC
Q 026555 36 PKALIFICHGYAMECSIG-MNSTAIRLANEGYACYGIDYQ 74 (237)
Q Consensus 36 ~~~~iv~~hG~~~~~~~~-~~~~~~~l~~~g~~v~~~d~~ 74 (237)
..|+||++.|+.+++... +..+...|...|++|.++.-|
T Consensus 54 ~~~vlIv~eG~DaAGKG~~I~~l~~~lDPRg~~V~s~~~P 93 (264)
T TIGR03709 54 RRSLLLVLQAMDAAGKDGTIRHVMSGVNPQGCQVTSFKAP 93 (264)
T ss_pred CCcEEEEEECCCCCCchHHHHHHHHhcCCCeeEEEeCCCC
Confidence 358999999999887732 345666666678888888554
No 283
>COG0218 Predicted GTPase [General function prediction only]
Probab=47.46 E-value=59 Score=24.26 Aligned_cols=15 Identities=20% Similarity=0.089 Sum_probs=12.2
Q ss_pred EEEeecCCCCCCCCC
Q 026555 68 CYGIDYQGHGKSAGL 82 (237)
Q Consensus 68 v~~~d~~g~G~s~~~ 82 (237)
...+|+||+|.....
T Consensus 72 ~~lVDlPGYGyAkv~ 86 (200)
T COG0218 72 LRLVDLPGYGYAKVP 86 (200)
T ss_pred EEEEeCCCcccccCC
Confidence 568899999988743
No 284
>TIGR01425 SRP54_euk signal recognition particle protein SRP54. This model represents examples from the eukaryotic cytosol of the signal recognition particle protein component, SRP54. This GTP-binding protein is a component of the eukaryotic signal recognition particle, along with several other protein subunits and a 7S RNA. Some species, including Arabidopsis, have several closely related forms. The extreme C-terminal region is glycine-rich and lower in complexity, poorly conserved between species, and excluded from this model.
Probab=47.30 E-value=1.2e+02 Score=25.84 Aligned_cols=69 Identities=13% Similarity=0.179 Sum_probs=43.1
Q ss_pred HHHhcCCEEEEeecCCCCCCCCCCCCcCChhhHHHHHHHHHHHHHhhhhcCCceEEEEEeccchHHHHHHHhcCCC--cc
Q 026555 60 RLANEGYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPD--YF 137 (237)
Q Consensus 60 ~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~--~~ 137 (237)
.+.+.+|.++.+|-+|.-. .-+.+.+.+..+.+.+ .+..++++--++-|.-+...+..+.+ .+
T Consensus 177 ~~~~~~~DvViIDTaGr~~---------~d~~lm~El~~i~~~~------~p~e~lLVlda~~Gq~a~~~a~~F~~~~~~ 241 (429)
T TIGR01425 177 KFKKENFDIIIVDTSGRHK---------QEDSLFEEMLQVAEAI------QPDNIIFVMDGSIGQAAEAQAKAFKDSVDV 241 (429)
T ss_pred HHHhCCCCEEEEECCCCCc---------chHHHHHHHHHHhhhc------CCcEEEEEeccccChhHHHHHHHHHhccCC
Confidence 3444578889999887432 2234556666665544 55667777777777666666665432 36
Q ss_pred cEEEEc
Q 026555 138 DGAVLV 143 (237)
Q Consensus 138 ~~~vl~ 143 (237)
.++|+-
T Consensus 242 ~g~IlT 247 (429)
T TIGR01425 242 GSVIIT 247 (429)
T ss_pred cEEEEE
Confidence 777763
No 285
>COG5441 Uncharacterized conserved protein [Function unknown]
Probab=47.10 E-value=1.5e+02 Score=23.82 Aligned_cols=101 Identities=12% Similarity=-0.006 Sum_probs=62.1
Q ss_pred EEEEcCCCCCCcCchHHHHHHHHhcCCEEEEeecCCCCCCCCC------------CCC---cC---Ch-hhHHHHHHHHH
Q 026555 40 IFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGL------------SGY---ID---NF-DDLVDDCFNHF 100 (237)
Q Consensus 40 iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~------------~~~---~~---~~-~~~~~d~~~~~ 100 (237)
.|++-|.+.+.......+++.....|.+++.+|.---+..... ... .. +- ...+.--.++.
T Consensus 4 rIyVvgT~DTKg~EL~ylad~I~~aG~~~v~vDvs~~~~~~~~~dis~~~VA~~hp~~~qAv~~~~Drg~AiaaMa~A~~ 83 (401)
T COG5441 4 RIYVVGTADTKGEELAYLADLIEAAGGSPVLVDVSTLRNPTSEVDISAEDVAGAHPGGRQAVLDGNDRGSAIAAMAEAFV 83 (401)
T ss_pred eEEEEecCCCcchhHHHHHHHHHHcCCCeEEEEeeccCCCCCCcccCHHHHhhhCCCcceeEeccCchhHHHHHHHHHHH
Confidence 5677777777776656778888888999999997532211100 000 00 00 11122333556
Q ss_pred HHHHhhhhcCCceEEEEEeccchHHHHHHHhcCCCcccEEEE
Q 026555 101 TSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVL 142 (237)
Q Consensus 101 ~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~~~~~vl 142 (237)
+.+ ..+.+..-++-+|-|.|-.+.+-.++..|--+-+++.
T Consensus 84 r~l--~sR~dV~gmig~GGsgGT~lit~~m~~LPlgvPK~mV 123 (401)
T COG5441 84 RFL--SSRGDVAGMIGMGGSGGTALITPAMRRLPLGVPKVMV 123 (401)
T ss_pred HHh--hcccchhheeecCCCcchHhhhhHHHhcCcCCcceee
Confidence 666 4455666788889999999998888887765555444
No 286
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=46.84 E-value=22 Score=27.87 Aligned_cols=21 Identities=24% Similarity=0.279 Sum_probs=17.8
Q ss_pred CceEEEEEeccchHHHHHHHh
Q 026555 111 EKMRYLLGESMGGAMVLLLHR 131 (237)
Q Consensus 111 ~~~~~l~G~S~Gg~~a~~~a~ 131 (237)
..+..++|||+|=..|+..+.
T Consensus 82 i~p~~v~GhS~GE~aAa~~aG 102 (290)
T TIGR00128 82 LKPDFAAGHSLGEYSALVAAG 102 (290)
T ss_pred CCCCEEeecCHHHHHHHHHhC
Confidence 788999999999988876664
No 287
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=46.84 E-value=30 Score=25.24 Aligned_cols=24 Identities=21% Similarity=0.122 Sum_probs=20.2
Q ss_pred CCceEEEEEeccchHHHHHHHhcC
Q 026555 110 KEKMRYLLGESMGGAMVLLLHRKK 133 (237)
Q Consensus 110 ~~~~~~l~G~S~Gg~~a~~~a~~~ 133 (237)
+...=.+.|-|.|+.++..++...
T Consensus 25 ~~~~d~i~GtSaGai~aa~~a~g~ 48 (194)
T cd07207 25 GILKKRVAGTSAGAITAALLALGY 48 (194)
T ss_pred CCCcceEEEECHHHHHHHHHHcCC
Confidence 455688999999999999998754
No 288
>TIGR03707 PPK2_P_aer polyphosphate kinase 2, PA0141 family. Members of this protein family are designated polyphosphate kinase 2 (PPK2) after the characterized protein in Pseudomonas aeruginosa. This family comprises one of three well-separated clades in the larger family described by Pfam model pfam03976. PA0141 from this family has been shown capable of operating in reverse, with GDP preferred (over ADP) as a substrate, producing GTP (or ATP) by transfer of a phosphate residue from polyphosphate. Most species with a member of this family also encode a polyphosphate kinase 1 (PPK1).
Probab=46.39 E-value=24 Score=26.93 Aligned_cols=39 Identities=10% Similarity=0.149 Sum_probs=28.4
Q ss_pred CcEEEEEEcCCCCCCcCc-hHHHHHHHHhcCCEEEEeecC
Q 026555 36 PKALIFICHGYAMECSIG-MNSTAIRLANEGYACYGIDYQ 74 (237)
Q Consensus 36 ~~~~iv~~hG~~~~~~~~-~~~~~~~l~~~g~~v~~~d~~ 74 (237)
..|+||++.|+.+++... +..+...|...|++|.++..|
T Consensus 29 ~~~vlIv~eG~DaAGKg~~I~~l~~~lDPRg~~v~~~~~p 68 (230)
T TIGR03707 29 GARVVIVFEGRDAAGKGGTIKRITEHLNPRGARVVALPKP 68 (230)
T ss_pred CCCEEEEEeCCCCCCchHHHHHHHHhcCCCeeEEEeCCCC
Confidence 368999999999888733 345666666678888877654
No 289
>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic. This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.
Probab=46.32 E-value=1.7e+02 Score=24.54 Aligned_cols=89 Identities=19% Similarity=0.249 Sum_probs=46.6
Q ss_pred EEEEEEcCCCCCCc---CchHHHHHHHHhcCCEEEEeecCCC---CCCCCCCCCcCChhhHHHHHHHHHHHHHhhhhcCC
Q 026555 38 ALIFICHGYAMECS---IGMNSTAIRLANEGYACYGIDYQGH---GKSAGLSGYIDNFDDLVDDCFNHFTSICEKEENKE 111 (237)
Q Consensus 38 ~~iv~~hG~~~~~~---~~~~~~~~~l~~~g~~v~~~d~~g~---G~s~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 111 (237)
.++|+++-+..... .. ..-...|.+.|+.|+-+.. |+ |... .....+.+++++.+...+..- .....
T Consensus 113 ~plviaPamn~~m~~~p~~-~~Nl~~L~~~G~~vv~P~~-g~~ac~~~g--~g~~~~~~~i~~~v~~~~~~~---~~~~~ 185 (390)
T TIGR00521 113 APIILAPAMNENMYNNPAV-QENIKRLKDDGYIFIEPDS-GLLACGDEG--KGRLAEPETIVKAAEREFSPK---EDLEG 185 (390)
T ss_pred CCEEEEeCCChhhcCCHHH-HHHHHHHHHCCcEEECCCC-ccccccccc--CCCCCCHHHHHHHHHHHHhhc---cccCC
Confidence 35777776543322 12 3345677777887655442 32 3222 111245566655555544321 12245
Q ss_pred ceEEEEEe------------------ccchHHHHHHHhcC
Q 026555 112 KMRYLLGE------------------SMGGAMVLLLHRKK 133 (237)
Q Consensus 112 ~~~~l~G~------------------S~Gg~~a~~~a~~~ 133 (237)
+++.+.|- .+|..++..++.+-
T Consensus 186 ~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~G 225 (390)
T TIGR00521 186 KRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRG 225 (390)
T ss_pred ceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCC
Confidence 67777766 36677777776643
No 290
>COG0541 Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=46.25 E-value=1.5e+02 Score=25.20 Aligned_cols=48 Identities=17% Similarity=0.212 Sum_probs=36.8
Q ss_pred hhHHHHHHHHHHHHHhhhhcCCceEEEEEeccchHHHHHHHhcCCCc--ccEEEEc
Q 026555 90 DDLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDY--FDGAVLV 143 (237)
Q Consensus 90 ~~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~--~~~~vl~ 143 (237)
+.+.+++.++-+.+ .+..+.++--||=|.-|...|..+.+. +.++|+-
T Consensus 198 e~Lm~El~~Ik~~~------~P~E~llVvDam~GQdA~~~A~aF~e~l~itGvIlT 247 (451)
T COG0541 198 EELMDELKEIKEVI------NPDETLLVVDAMIGQDAVNTAKAFNEALGITGVILT 247 (451)
T ss_pred HHHHHHHHHHHhhc------CCCeEEEEEecccchHHHHHHHHHhhhcCCceEEEE
Confidence 55666666666655 788899999999999999888876554 7788874
No 291
>COG3727 Vsr DNA G:T-mismatch repair endonuclease [DNA replication, recombination, and repair]
Probab=45.64 E-value=66 Score=22.20 Aligned_cols=35 Identities=14% Similarity=0.209 Sum_probs=22.7
Q ss_pred cEEEEEEcCCCCCCc-------------Cch----------HHHHHHHHhcCCEEEEe
Q 026555 37 KALIFICHGYAMECS-------------IGM----------NSTAIRLANEGYACYGI 71 (237)
Q Consensus 37 ~~~iv~~hG~~~~~~-------------~~~----------~~~~~~l~~~g~~v~~~ 71 (237)
..+++|+||..=+.+ .|. ......|.+.|++|+++
T Consensus 57 y~~viFvHGCFWh~H~c~~a~vPksnt~fWleKi~kNveRD~r~~~~L~~~GwrvlvV 114 (150)
T COG3727 57 YRCVIFVHGCFWHGHHCYLAKVPKSNTEFWLEKIGKNVERDERDIKRLQQLGWRVLVV 114 (150)
T ss_pred ceEEEEEeeeeccCCccccccCCCcchHHHHHHHhhhhhhhHHHHHHHHHcCCeEEEE
Confidence 468999999642222 121 23457888899998764
No 292
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=44.99 E-value=36 Score=24.38 Aligned_cols=25 Identities=20% Similarity=0.296 Sum_probs=21.1
Q ss_pred CCceEEEEEeccchHHHHHHHhcCC
Q 026555 110 KEKMRYLLGESMGGAMVLLLHRKKP 134 (237)
Q Consensus 110 ~~~~~~l~G~S~Gg~~a~~~a~~~p 134 (237)
+...-.+.|-|.|+.++..++...+
T Consensus 24 gi~~d~v~GtSaGAi~aa~~a~g~~ 48 (172)
T cd07198 24 GPLIDIIAGTSAGAIVAALLASGRD 48 (172)
T ss_pred CCCCCEEEEECHHHHHHHHHHcCCC
Confidence 5567889999999999999998654
No 293
>PRK10279 hypothetical protein; Provisional
Probab=44.77 E-value=29 Score=27.74 Aligned_cols=24 Identities=13% Similarity=0.137 Sum_probs=20.8
Q ss_pred CCceEEEEEeccchHHHHHHHhcC
Q 026555 110 KEKMRYLLGESMGGAMVLLLHRKK 133 (237)
Q Consensus 110 ~~~~~~l~G~S~Gg~~a~~~a~~~ 133 (237)
+...-.+.|-|+|+.++..||...
T Consensus 31 gi~~d~i~GtS~GAlvga~yA~g~ 54 (300)
T PRK10279 31 GIEIDIVAGCSIGSLVGAAYACDR 54 (300)
T ss_pred CCCcCEEEEEcHHHHHHHHHHcCC
Confidence 667788999999999999998654
No 294
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=44.76 E-value=1.2e+02 Score=23.30 Aligned_cols=33 Identities=24% Similarity=0.299 Sum_probs=23.5
Q ss_pred EEEEcCCCCCCcCchHHHHHHHHhcCCEEEEeecCC
Q 026555 40 IFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQG 75 (237)
Q Consensus 40 iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g 75 (237)
++++-|..+.. - ..+++.|.+.|++|+..+...
T Consensus 11 ~vlItG~s~gI--G-~~la~~l~~~G~~v~~~~~~~ 43 (266)
T PRK06171 11 IIIVTGGSSGI--G-LAIVKELLANGANVVNADIHG 43 (266)
T ss_pred EEEEeCCCChH--H-HHHHHHHHHCCCEEEEEeCCc
Confidence 45555544332 3 688999999999999988654
No 295
>cd07212 Pat_PNPLA9 Patatin-like phospholipase domain containing protein 9. PNPLA9 is a Ca-independent phospholipase that catalyzes the hydrolysis of glycerophospholipids at the sn-2 position. PNPLA9 is also known as PLA2G6 (phospholipase A2 group VI) or iPLA2beta. PLA2G6 is stimulated by ATP and inhibited by bromoenol lactone (BEL). In humans, PNPLA9 in expressed ubiquitously and is involved in signal transduction, cell proliferation, and apoptotic cell death. Mutations in human PLA2G6 leads to infantile neuroaxonal dystrophy (INAD) and idiopathic neurodegeneration with brain iron accumulation (NBIA). This family includes PLA2G6 from Homo sapiens and Rattus norvegicus.
Probab=44.01 E-value=20 Score=28.75 Aligned_cols=19 Identities=37% Similarity=0.644 Sum_probs=16.7
Q ss_pred EEEEeccchHHHHHHHhcC
Q 026555 115 YLLGESMGGAMVLLLHRKK 133 (237)
Q Consensus 115 ~l~G~S~Gg~~a~~~a~~~ 133 (237)
.+.|.|+||.+|+.++..+
T Consensus 35 ~i~GTStGgiIA~~la~g~ 53 (312)
T cd07212 35 WIAGTSTGGILALALLHGK 53 (312)
T ss_pred EEEeeChHHHHHHHHHcCC
Confidence 5999999999999998754
No 296
>PF03681 UPF0150: Uncharacterised protein family (UPF0150); InterPro: IPR005357 This family of small proteins is uncharacterised. In Q9A3L8 from SWISSPROT this domain is found next to a DNA binding helix-turn-helix domain IPR002145 from INTERPRO, which suggests that this is some kind of ligand binding domain.; PDB: 2DSY_C 2YZT_A 3KWR_A.
Probab=43.97 E-value=22 Score=19.27 Aligned_cols=34 Identities=21% Similarity=0.385 Sum_probs=23.8
Q ss_pred cCCEEEEeecCCCCCCCCCCCCcCChhhHHHHHHHHHHHH
Q 026555 64 EGYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSI 103 (237)
Q Consensus 64 ~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~d~~~~~~~~ 103 (237)
.+|.+.++|++|.-.. + .+.++..+++.+++...
T Consensus 12 ~~y~~~~pdlpg~~t~-G-----~t~eea~~~~~eal~~~ 45 (48)
T PF03681_consen 12 GGYVAYFPDLPGCFTQ-G-----DTLEEALENAKEALELW 45 (48)
T ss_dssp SSEEEEETTCCTCEEE-E-----SSHHHHHHHHHHHHHHH
T ss_pred CeEEEEeCCccChhhc-C-----CCHHHHHHHHHHHHHHH
Confidence 4688999999986411 1 36777777887777654
No 297
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=43.39 E-value=87 Score=22.66 Aligned_cols=53 Identities=13% Similarity=0.190 Sum_probs=35.0
Q ss_pred HHhcCCEEEEeecCCCCCCCCCCCCcCChhhHHHHHHHHHHHHHhhhhcCCceEEEEEeccc
Q 026555 61 LANEGYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEKEENKEKMRYLLGESMG 122 (237)
Q Consensus 61 l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~G 122 (237)
|.+.|++.+++|.-++=-.. .-.+...++.+.++.+ ++....+++.++-.|.|
T Consensus 36 Lk~~Gik~li~DkDNTL~~~-------~~~~i~~~~~~~~~~l--~~~~~~~~v~IvSNsaG 88 (168)
T PF09419_consen 36 LKKKGIKALIFDKDNTLTPP-------YEDEIPPEYAEWLNEL--KKQFGKDRVLIVSNSAG 88 (168)
T ss_pred hhhcCceEEEEcCCCCCCCC-------CcCcCCHHHHHHHHHH--HHHCCCCeEEEEECCCC
Confidence 88889999999997663222 2223334566666666 44445568999988875
No 298
>PF11713 Peptidase_C80: Peptidase C80 family; InterPro: IPR020974 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. This entry identifies a domain that functions as a cysteine peptidase that belongs to MEROPS peptidase family C80 (RTX self-cleaving toxin, clan CD). This domain is found in bacterial toxins that self-process by a cysteine peptidase mechanism. These include Vibrio cholerae RTX toxin [], and Clostridium difficile toxins A and B []. Some pathogenic bacteria produce unrelated toxins that also require activation and processing, the processing often being autolytic as it is in anthrax lethal factor, tentoxilysin (the tetanus neurotoxin) and bontoxilysin (the botulinum neurotoxin), all of which are metallopeptidases.; PDB: 3GCD_C 3EEB_B 3FZY_A 3PEE_A 3PA8_B 3HO6_A.
Probab=43.37 E-value=24 Score=25.13 Aligned_cols=56 Identities=18% Similarity=0.135 Sum_probs=27.4
Q ss_pred EEeecCCCCCCCCCCCC--cCChhhHHHHHHHHHHHHHhhh--hcCCceEEEEEeccchH
Q 026555 69 YGIDYQGHGKSAGLSGY--IDNFDDLVDDCFNHFTSICEKE--ENKEKMRYLLGESMGGA 124 (237)
Q Consensus 69 ~~~d~~g~G~s~~~~~~--~~~~~~~~~d~~~~~~~~~~~~--~~~~~~~~l~G~S~Gg~ 124 (237)
+.+-+-|||........ -.+.++++.-+..+-+.+.+.. ...++++.++|-|++..
T Consensus 57 ~rw~lVGHG~~~~~~~~l~g~~a~~La~~l~~~~~~l~~~~~~~~~P~~IsLvGC~l~~~ 116 (157)
T PF11713_consen 57 VRWQLVGHGRDEFNNQTLAGYSADELANKLIKFKQQLKQKYGINISPKKISLVGCSLADN 116 (157)
T ss_dssp EEEEEE--EESSTSSSEETTEEHHHHHHHHHHHHHHHHHHHTTT--ESEEEEESSS-S-T
T ss_pred ceEEEEEeCCCcCCCceeCCCCHHHHHHHHHHHHHHHHHhccCCCCCCEEEEEEecccCC
Confidence 44556678876221111 1345566666655546663322 22456888888888766
No 299
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6. These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.
Probab=43.05 E-value=37 Score=26.69 Aligned_cols=24 Identities=21% Similarity=0.176 Sum_probs=20.3
Q ss_pred CCceEEEEEeccchHHHHHHHhcC
Q 026555 110 KEKMRYLLGESMGGAMVLLLHRKK 133 (237)
Q Consensus 110 ~~~~~~l~G~S~Gg~~a~~~a~~~ 133 (237)
+...=.+.|-|+|+.++..+|...
T Consensus 36 gi~~d~v~GtSaGAiiga~ya~g~ 59 (269)
T cd07227 36 GIPIDAIGGTSIGSFVGGLYAREA 59 (269)
T ss_pred CCCccEEEEECHHHHHHHHHHcCC
Confidence 566778999999999999998753
No 300
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=42.62 E-value=1.6e+02 Score=24.75 Aligned_cols=73 Identities=12% Similarity=0.208 Sum_probs=38.3
Q ss_pred EEEEEEcCCCCCCcCch----HHHHHHHHhcCCEEEEeecCCC---CCCCCCCCCcCChhhHHHHHHHHHHHHHhhhhcC
Q 026555 38 ALIFICHGYAMECSIGM----NSTAIRLANEGYACYGIDYQGH---GKSAGLSGYIDNFDDLVDDCFNHFTSICEKEENK 110 (237)
Q Consensus 38 ~~iv~~hG~~~~~~~~~----~~~~~~l~~~g~~v~~~d~~g~---G~s~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 110 (237)
.++++++-+... +|. ..-...|.+.|+.|+-++ +|+ |... .+...+.++.+..+...+. .+...
T Consensus 117 ~pvvi~Pamn~~--m~~~p~~~~Nl~~L~~~G~~ii~P~-~g~la~~~~g--~gr~~~~~~I~~~~~~~~~----~~~l~ 187 (399)
T PRK05579 117 APVLVAPAMNTQ--MWENPATQRNLATLRSRGVEIIGPA-SGRLACGDVG--PGRMAEPEEIVAAAERALS----PKDLA 187 (399)
T ss_pred CCEEEEeCCChh--HcCCHHHHHHHHHHHHCCCEEECCC-CccccCCCcC--CCCCCCHHHHHHHHHHHhh----hcccC
Confidence 457777765432 331 334577888899877554 343 2221 1112455555555554442 12234
Q ss_pred CceEEEEEe
Q 026555 111 EKMRYLLGE 119 (237)
Q Consensus 111 ~~~~~l~G~ 119 (237)
.+++.+.|-
T Consensus 188 gk~vlITgG 196 (399)
T PRK05579 188 GKRVLITAG 196 (399)
T ss_pred CCEEEEeCC
Confidence 567777777
No 301
>PRK00091 miaA tRNA delta(2)-isopentenylpyrophosphate transferase; Reviewed
Probab=42.48 E-value=1.5e+02 Score=23.82 Aligned_cols=33 Identities=18% Similarity=0.161 Sum_probs=22.4
Q ss_pred EEEEEEcCCCCCCcCchHHHHHHHHhc-CCEEEEeec
Q 026555 38 ALIFICHGYAMECSIGMNSTAIRLANE-GYACYGIDY 73 (237)
Q Consensus 38 ~~iv~~hG~~~~~~~~~~~~~~~l~~~-g~~v~~~d~ 73 (237)
+.++++-|-.+++. ..++..|++. +..++..|-
T Consensus 4 ~~~i~i~GptgsGK---t~la~~la~~~~~~iis~Ds 37 (307)
T PRK00091 4 PKVIVIVGPTASGK---TALAIELAKRLNGEIISADS 37 (307)
T ss_pred ceEEEEECCCCcCH---HHHHHHHHHhCCCcEEeccc
Confidence 34777777776666 5677777765 566776665
No 302
>PTZ00256 glutathione peroxidase; Provisional
Probab=42.45 E-value=68 Score=23.34 Aligned_cols=57 Identities=11% Similarity=0.128 Sum_probs=33.2
Q ss_pred cceeEeecCCcEEEEEEeecCCCCCcEEEEEEcCCCCCCcCc------hHHHHHHHHhcCCEEEEeecC
Q 026555 12 DEEFILNSRRVKLFTCSWIPQNQEPKALIFICHGYAMECSIG------MNSTAIRLANEGYACYGIDYQ 74 (237)
Q Consensus 12 ~~~~~~~~~g~~l~~~~~~~~~~~~~~~iv~~hG~~~~~~~~------~~~~~~~l~~~g~~v~~~d~~ 74 (237)
....+.+.+|..+....+ ..+++||++. +...|... +..+.+.+.+.|+.|+++...
T Consensus 21 p~f~l~d~~G~~vsLs~~-----~Gk~vvlv~n-~atwCp~C~~e~p~l~~l~~~~~~~gv~vv~vs~~ 83 (183)
T PTZ00256 21 FEFEAIDIDGQLVQLSKF-----KGKKAIIVVN-VACKCGLTSDHYTQLVELYKQYKSQGLEILAFPCN 83 (183)
T ss_pred cceEeEcCCCCEEeHHHh-----CCCcEEEEEE-ECCCCCchHHHHHHHHHHHHHHhhCCcEEEEEecc
Confidence 344556678876655444 3355555555 55544422 234556666678999888643
No 303
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=42.43 E-value=43 Score=25.34 Aligned_cols=24 Identities=17% Similarity=0.041 Sum_probs=19.8
Q ss_pred CCceEEEEEeccchHHHHHHHhcC
Q 026555 110 KEKMRYLLGESMGGAMVLLLHRKK 133 (237)
Q Consensus 110 ~~~~~~l~G~S~Gg~~a~~~a~~~ 133 (237)
+.+.-.+.|-|.|+.++..++...
T Consensus 26 gi~~~~i~GtSaGAi~aa~~a~g~ 49 (221)
T cd07210 26 GLEPSAISGTSAGALVGGLFASGI 49 (221)
T ss_pred CCCceEEEEeCHHHHHHHHHHcCC
Confidence 455668999999999999998754
No 304
>cd05312 NAD_bind_1_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 1. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists of eukaryotic and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH
Probab=41.93 E-value=42 Score=26.53 Aligned_cols=83 Identities=16% Similarity=0.106 Sum_probs=43.6
Q ss_pred EEEEcCCCCCCcCchHHHHHHHHhcCC-------EEEEeecCCCCCCCCCCCCcCChhhHH--------HHHHHHHHHHH
Q 026555 40 IFICHGYAMECSIGMNSTAIRLANEGY-------ACYGIDYQGHGKSAGLSGYIDNFDDLV--------DDCFNHFTSIC 104 (237)
Q Consensus 40 iv~~hG~~~~~~~~~~~~~~~l~~~g~-------~v~~~d~~g~G~s~~~~~~~~~~~~~~--------~d~~~~~~~~~ 104 (237)
-+++.|.|...-.-.+-+...+.++|. +++.+|..|-=..+...-. .....++ .++.++++.+
T Consensus 27 ~iv~~GAGsAg~gia~ll~~~~~~~G~~~eeA~~~i~~vD~~Gll~~~r~~l~-~~~~~~a~~~~~~~~~~L~e~i~~v- 104 (279)
T cd05312 27 RILFLGAGSAGIGIADLIVSAMVREGLSEEEARKKIWLVDSKGLLTKDRKDLT-PFKKPFARKDEEKEGKSLLEVVKAV- 104 (279)
T ss_pred EEEEECcCHHHHHHHHHHHHHHHHcCCChhhccCeEEEEcCCCeEeCCCCcch-HHHHHHHhhcCcccCCCHHHHHHhc-
Confidence 345556554333222445555555677 8999999885322211000 0111112 2455555443
Q ss_pred hhhhcCCceEEEEEec-cchHHHHHHHh
Q 026555 105 EKEENKEKMRYLLGES-MGGAMVLLLHR 131 (237)
Q Consensus 105 ~~~~~~~~~~~l~G~S-~Gg~~a~~~a~ 131 (237)
++-+++|-| .||.+.-.+.+
T Consensus 105 -------~ptvlIG~S~~~g~ft~evv~ 125 (279)
T cd05312 105 -------KPTVLIGLSGVGGAFTEEVVR 125 (279)
T ss_pred -------CCCEEEEeCCCCCCCCHHHHH
Confidence 678999999 47766655443
No 305
>PRK14729 miaA tRNA delta(2)-isopentenylpyrophosphate transferase; Provisional
Probab=41.34 E-value=1.9e+02 Score=23.26 Aligned_cols=61 Identities=8% Similarity=0.040 Sum_probs=39.0
Q ss_pred EEEEcCCCCCCcCchHHHHHHHHhcCCEEEEeec----CCC--C--CCC--------------CCCCCcCChhhHHHHHH
Q 026555 40 IFICHGYAMECSIGMNSTAIRLANEGYACYGIDY----QGH--G--KSA--------------GLSGYIDNFDDLVDDCF 97 (237)
Q Consensus 40 iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~----~g~--G--~s~--------------~~~~~~~~~~~~~~d~~ 97 (237)
||++-|-.+++. ..++-.|++++..++..|- +|. | ..+ -.....++..++.++..
T Consensus 6 ii~I~GpTasGK---S~LAl~LA~~~~eIIsaDS~QvYr~ldIgTaKpt~eE~~~i~Hhlid~~~p~e~~sv~~f~~~a~ 82 (300)
T PRK14729 6 IVFIFGPTAVGK---SNILFHFPKGKAEIINVDSIQVYKEFDIASCKPSKELRKHIKHHLVDFLEPIKEYNLGIFYKEAL 82 (300)
T ss_pred EEEEECCCccCH---HHHHHHHHHhCCcEEeccHHHHHCCCceecCCCCHHHHcCCCeeeeeccCCCCceeHHHHHHHHH
Confidence 677777666666 5667777776567888883 332 2 111 01223367788888888
Q ss_pred HHHHHH
Q 026555 98 NHFTSI 103 (237)
Q Consensus 98 ~~~~~~ 103 (237)
++++.+
T Consensus 83 ~~i~~i 88 (300)
T PRK14729 83 KIIKEL 88 (300)
T ss_pred HHHHHH
Confidence 888877
No 306
>COG0331 FabD (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]
Probab=41.31 E-value=32 Score=27.63 Aligned_cols=22 Identities=23% Similarity=0.264 Sum_probs=18.4
Q ss_pred CCceEEEEEeccchHHHHHHHh
Q 026555 110 KEKMRYLLGESMGGAMVLLLHR 131 (237)
Q Consensus 110 ~~~~~~l~G~S~Gg~~a~~~a~ 131 (237)
+.++.++.|||+|=+-|+..+.
T Consensus 83 ~~~p~~~aGHSlGEysAl~~ag 104 (310)
T COG0331 83 GVKPDFVAGHSLGEYSALAAAG 104 (310)
T ss_pred CCCCceeecccHhHHHHHHHcc
Confidence 5788899999999888876654
No 307
>PF10686 DUF2493: Protein of unknown function (DUF2493); InterPro: IPR019627 This entry is represented by Mycobacteriophage D29, Gp61. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. Members of this family are mainly Proteobacteria. The function is not known.
Probab=41.05 E-value=47 Score=20.05 Aligned_cols=38 Identities=32% Similarity=0.448 Sum_probs=21.5
Q ss_pred cEEEEEEcCCCCCCcCchHHHHHHHHhc-CCEEEE--eecCCCC
Q 026555 37 KALIFICHGYAMECSIGMNSTAIRLANE-GYACYG--IDYQGHG 77 (237)
Q Consensus 37 ~~~iv~~hG~~~~~~~~~~~~~~~l~~~-g~~v~~--~d~~g~G 77 (237)
.|.++++||.....- +.++...++. |..++. +|+.-||
T Consensus 31 ~~~~~lvhGga~~Ga---D~iA~~wA~~~gv~~~~~~adW~~hG 71 (71)
T PF10686_consen 31 HPDMVLVHGGAPKGA---DRIAARWARERGVPVIRFPADWQRHG 71 (71)
T ss_pred CCCEEEEECCCCCCH---HHHHHHHHHHCCCeeEEeCcChhhCC
Confidence 356889998553222 5666666554 665544 4544443
No 308
>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=40.89 E-value=38 Score=27.04 Aligned_cols=24 Identities=17% Similarity=0.185 Sum_probs=21.2
Q ss_pred CCceEEEEEeccchHHHHHHHhcC
Q 026555 110 KEKMRYLLGESMGGAMVLLLHRKK 133 (237)
Q Consensus 110 ~~~~~~l~G~S~Gg~~a~~~a~~~ 133 (237)
+...-.+.|-|+|+.++..+|...
T Consensus 37 gi~~~~iaGtS~GAiva~l~A~g~ 60 (306)
T COG1752 37 GIPIDVIAGTSAGAIVAALYAAGM 60 (306)
T ss_pred CCCccEEEecCHHHHHHHHHHcCC
Confidence 678899999999999999998754
No 309
>PF03976 PPK2: Polyphosphate kinase 2 (PPK2); InterPro: IPR022488 This presumed domain is found in one or two copies per protein. The domain is about 230 amino acids in length and has many conserved motifs, it has polyphosphate kinase activity [, ].; PDB: 3CZP_A 3RHF_D 3CZQ_B.
Probab=40.16 E-value=12 Score=28.57 Aligned_cols=38 Identities=13% Similarity=0.242 Sum_probs=25.1
Q ss_pred cEEEEEEcCCCCCCcCc-hHHHHHHHHhcCCEEEEeecC
Q 026555 37 KALIFICHGYAMECSIG-MNSTAIRLANEGYACYGIDYQ 74 (237)
Q Consensus 37 ~~~iv~~hG~~~~~~~~-~~~~~~~l~~~g~~v~~~d~~ 74 (237)
.|+||++.|+.+++... +..+...|-..|++|.++..|
T Consensus 30 ~~vlIl~eG~d~sGKg~~I~~l~~~lDPR~~~v~~~~~p 68 (228)
T PF03976_consen 30 IPVLILFEGWDASGKGGTINRLIEWLDPRGFRVHAFGKP 68 (228)
T ss_dssp HEEEEEEEESTTSSHHHHHHHHHCCS-GGGEEEEE-SS-
T ss_pred CcEEEEEeccccCCchHHHHHHHHhCCCCeeEEEeCCCC
Confidence 67999999999988732 234444455568888888764
No 310
>PF14403 CP_ATPgrasp_2: Circularly permuted ATP-grasp type 2
Probab=39.95 E-value=25 Score=29.78 Aligned_cols=88 Identities=11% Similarity=0.105 Sum_probs=52.0
Q ss_pred EeecCCCCCcEEEEEEcCCCCCCcCchHHHHHHHHhcCCEEEEeecCCCCCCCCC-------CCCcC------ChhhHHH
Q 026555 28 SWIPQNQEPKALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGL-------SGYID------NFDDLVD 94 (237)
Q Consensus 28 ~~~~~~~~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~-------~~~~~------~~~~~~~ 94 (237)
.+....++|+-+||-..+.+...+ + ..+.+.|.++||.+++.|.+.--.-.+. ..-.+ .+-...+
T Consensus 178 ~~~~~~~~P~IAIvDf~~~~~~~E-f-~~f~~~f~~~G~~~vI~d~~~L~y~~g~L~~~~~~ID~VyRR~Vt~e~l~~~d 255 (445)
T PF14403_consen 178 TFGGRVEKPNIAIVDFLEYPTLSE-F-EVFQRLFEEHGYDCVICDPRDLEYRDGRLYAGGRPIDAVYRRFVTSELLERYD 255 (445)
T ss_pred HhcCcCCCCcEEEEecccCCccch-H-HHHHHHHHHcCCceEecChHHceecCCEEEECCEeeehhhHhhhhHHhhhccc
Confidence 333333355667888888766655 5 7889999999999999987653222211 00000 1112223
Q ss_pred HHHHHHHHHHhhhhcCCceEEEEEeccch
Q 026555 95 DCFNHFTSICEKEENKEKMRYLLGESMGG 123 (237)
Q Consensus 95 d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg 123 (237)
.+..+++++ ....+.++|..-+=
T Consensus 256 ~~~~li~Ay------~~~av~~vgsfrs~ 278 (445)
T PF14403_consen 256 EVQPLIQAY------RDGAVCMVGSFRSQ 278 (445)
T ss_pred cchHHHHHH------hcCCeEEecchhhh
Confidence 455666666 56788888865443
No 311
>PRK00131 aroK shikimate kinase; Reviewed
Probab=39.54 E-value=37 Score=24.04 Aligned_cols=33 Identities=18% Similarity=0.217 Sum_probs=24.0
Q ss_pred EEEEEEcCCCCCCcCchHHHHHHHHhc-CCEEEEeec
Q 026555 38 ALIFICHGYAMECSIGMNSTAIRLANE-GYACYGIDY 73 (237)
Q Consensus 38 ~~iv~~hG~~~~~~~~~~~~~~~l~~~-g~~v~~~d~ 73 (237)
+.++++.|.+++.. ..+++.|++. |+.++..|.
T Consensus 4 ~~~i~l~G~~GsGK---stla~~La~~l~~~~~d~d~ 37 (175)
T PRK00131 4 GPNIVLIGFMGAGK---STIGRLLAKRLGYDFIDTDH 37 (175)
T ss_pred CCeEEEEcCCCCCH---HHHHHHHHHHhCCCEEEChH
Confidence 45899999998888 6677777764 676665553
No 312
>KOG3922 consensus Sulfotransferases [Posttranslational modification, protein turnover, chaperones]
Probab=38.85 E-value=2.1e+02 Score=23.11 Aligned_cols=71 Identities=14% Similarity=0.083 Sum_probs=43.5
Q ss_pred CcEEEEEEcCCCCCCcCchHHHHHHHHhc-CCEEEEeecCCCCCCCCCCCCcCChhhHHHHHHHHHHHHHhhhhcCCceE
Q 026555 36 PKALIFICHGYAMECSIGMNSTAIRLANE-GYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEKEENKEKMR 114 (237)
Q Consensus 36 ~~~~iv~~hG~~~~~~~~~~~~~~~l~~~-g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 114 (237)
+.+.+|+-.-.+-.+...+..++..|.+. ||+|+..+..- ....-+..+..+-+..+..+. ..+|.
T Consensus 76 ~~~~vViyNRVpKtGStTf~niaydL~ekn~F~vlh~nvtk-------n~~vlsl~dQ~qfvknIssw~------e~~P~ 142 (361)
T KOG3922|consen 76 EEMEVVIYNRVPKTGSTTFVNIAYDLSEKNGFHVLHINVTK-------NETVLSLPDQQQFVKNISSWT------EMKPA 142 (361)
T ss_pred ccceEEEEecCCCccchhHHHHHHHHHhccCceEEEeeccc-------cceeeccHHHHHHHHhhcccc------ccCcc
Confidence 45678888888776665557788888764 99999998741 112234455555555554433 23455
Q ss_pred EEEEe
Q 026555 115 YLLGE 119 (237)
Q Consensus 115 ~l~G~ 119 (237)
...||
T Consensus 143 ~yhgH 147 (361)
T KOG3922|consen 143 LYHGH 147 (361)
T ss_pred eeeee
Confidence 55555
No 313
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=38.84 E-value=46 Score=25.32 Aligned_cols=36 Identities=22% Similarity=0.373 Sum_probs=24.8
Q ss_pred cEEEEEEcCCCCCCcCchHHHHHHHHhcCCEEEEeecC
Q 026555 37 KALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQ 74 (237)
Q Consensus 37 ~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 74 (237)
.+..|++-|...- ..- ..++..|+++||.|++--.+
T Consensus 6 ~~k~VlItgcs~G-GIG-~ala~ef~~~G~~V~AtaR~ 41 (289)
T KOG1209|consen 6 QPKKVLITGCSSG-GIG-YALAKEFARNGYLVYATARR 41 (289)
T ss_pred CCCeEEEeecCCc-chh-HHHHHHHHhCCeEEEEEccc
Confidence 3446777664432 233 58999999999999986543
No 314
>PF01656 CbiA: CobQ/CobB/MinD/ParA nucleotide binding domain; InterPro: IPR002586 This entry consists of various cobyrinic acid a,c-diamide synthases. These include CbiA and CbiP from Salmonella typhimurium []., and CobQ from Rhodobacter capsulatus []. These amidases catalyse amidations to various side chains of hydrogenobyrinic acid or cobyrinic acid a,c-diamide in the biosynthesis of cobalamin (vitamin B12) from uroporphyrinogen III. Vitamin B12 is an important cofactor and an essential nutrient for many plants and animals and is primarily produced by bacteria [].; PDB: 3K9G_A 3K9H_B 3EZ9_B 3EZF_A 3EZ2_B 3EZ6_A 3EZ7_A 1G3Q_A 1G3R_A 1DTS_A ....
Probab=38.39 E-value=50 Score=23.84 Aligned_cols=37 Identities=22% Similarity=0.170 Sum_probs=24.9
Q ss_pred EEEEcCCCCCCcCch-HHHHHHHHhcCCEEEEeecCCC
Q 026555 40 IFICHGYAMECSIGM-NSTAIRLANEGYACYGIDYQGH 76 (237)
Q Consensus 40 iv~~hG~~~~~~~~~-~~~~~~l~~~g~~v~~~d~~g~ 76 (237)
|.+..+-|+.+.... ..++..|+++|++|+.+|.--.
T Consensus 1 I~v~~~kGG~GKTt~a~~la~~la~~g~~VlliD~D~~ 38 (195)
T PF01656_consen 1 IAVTSGKGGVGKTTIAANLAQALARKGKKVLLIDLDPQ 38 (195)
T ss_dssp EEEEESSTTSSHHHHHHHHHHHHHHTTS-EEEEEESTT
T ss_pred CEEEcCCCCccHHHHHHHHHhccccccccccccccCcc
Confidence 345555566555432 4688999999999999998543
No 315
>PLN02735 carbamoyl-phosphate synthase
Probab=38.31 E-value=2.1e+02 Score=27.82 Aligned_cols=120 Identities=14% Similarity=0.092 Sum_probs=57.8
Q ss_pred cEEEEEEcCCCCCCc-----Cc-hHHHHHHHHhcCCEEEEeecCCCCCCCCC--CCCcCChhhHHHHHHHHHHHHHhhhh
Q 026555 37 KALIFICHGYAMECS-----IG-MNSTAIRLANEGYACYGIDYQGHGKSAGL--SGYIDNFDDLVDDCFNHFTSICEKEE 108 (237)
Q Consensus 37 ~~~iv~~hG~~~~~~-----~~-~~~~~~~l~~~g~~v~~~d~~g~G~s~~~--~~~~~~~~~~~~d~~~~~~~~~~~~~ 108 (237)
+..|+++-+.+.... .| .-.....|.+.||.++++|....--|... .+..+...-.++++.++++..
T Consensus 574 ~kkvlilG~G~~~igq~iefd~~~v~~~~alr~~G~~tI~v~~npetvstd~~~aD~~y~~pl~~e~vl~i~~~e----- 648 (1102)
T PLN02735 574 KKKVLILGGGPNRIGQGIEFDYCCCHASFALQDAGYETIMMNSNPETVSTDYDTSDRLYFEPLTVEDVLNVIDLE----- 648 (1102)
T ss_pred CceEEEeCccccccCcccccceeHHHHHHHHHHcCCeEEEEeCCCccccCCcccCCeEEEEeCCHHHHHHHHHHh-----
Confidence 445666655432222 12 12467889999999999887544333211 111122222355665655543
Q ss_pred cCCceEEEEEeccchHHHHHHHhcCCCc-----------ccEEEEcCCccccccccCChHHHHHHHHH
Q 026555 109 NKEKMRYLLGESMGGAMVLLLHRKKPDY-----------FDGAVLVAPMCKIAENVKPHPLVISVLTK 165 (237)
Q Consensus 109 ~~~~~~~l~G~S~Gg~~a~~~a~~~p~~-----------~~~~vl~~~~~~~~~~~~~~~~~~~~~~~ 165 (237)
+. ..++ -+.||-.++.++...-+. -.++.++++................++..
T Consensus 649 -~~-d~Vi--~~~Ggq~~l~la~~l~~~L~e~~~fa~~~~~gi~i~G~s~e~i~i~~DK~~~k~~l~~ 712 (1102)
T PLN02735 649 -RP-DGII--VQFGGQTPLKLALPIQKYLDKNPPPSASGNGNVKIWGTSPDSIDAAEDRERFNAILNE 712 (1102)
T ss_pred -CC-CEEE--ECCCchHHHHHHHHHHHHHHhccchhhhhcCCeEEECCCHHHHHHhcCHHHHHHHHHH
Confidence 23 2333 356776665544432111 12566666665544333333344444433
No 316
>COG3562 KpsS Capsule polysaccharide export protein [Cell envelope biogenesis, outer membrane]
Probab=38.23 E-value=2.3e+02 Score=23.33 Aligned_cols=87 Identities=14% Similarity=0.114 Sum_probs=55.4
Q ss_pred EEEEEcCCCCCCcCchHHHHHHHHhcCCEEEEeecCCCCCCCCCC-CCcCChhhHHHHHHHHHHHHHhhhhcCCceEEEE
Q 026555 39 LIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLS-GYIDNFDDLVDDCFNHFTSICEKEENKEKMRYLL 117 (237)
Q Consensus 39 ~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~-~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~ 117 (237)
.++++.|=-+ .++..++..+...|-+|+.+++- -|++.-.. .......+..++..+.++.. ..+...+.++++
T Consensus 15 NflllQGPvg---~ff~~la~~le~~~~~v~k~NfN-~GD~~fyp~~~t~~~~~~~D~~~~~~r~f--~~~hsi~aivlf 88 (403)
T COG3562 15 NFLLLQGPVG---PFFQELASWLELNGKRVFKINFN-AGDSTFYPQAGTVVYNDNLDDFPTFLRKF--IAQHSIDAIVLF 88 (403)
T ss_pred ceEeeeCCcc---hHHHHHHHHHHhcCceEEEEeec-CCCceeeecCCccccccchhHHHHHHHHH--HHhccCCceEEe
Confidence 4778877333 36689999998889999999984 34433111 11124455566677777777 455577888888
Q ss_pred Eeccch-HHHHHHHh
Q 026555 118 GESMGG-AMVLLLHR 131 (237)
Q Consensus 118 G~S~Gg-~~a~~~a~ 131 (237)
|-..-= .+|...|.
T Consensus 89 gd~R~yh~iA~~va~ 103 (403)
T COG3562 89 GDTRLYHRIAKTVAI 103 (403)
T ss_pred ccchHHHHHHHHHHH
Confidence 876442 44555554
No 317
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=37.89 E-value=1.2e+02 Score=27.01 Aligned_cols=46 Identities=17% Similarity=0.142 Sum_probs=30.6
Q ss_pred CCcEEEEEEcCCCCCCcCc--hHHHHHHHHhcCCEEEEeecCC--CCCCC
Q 026555 35 EPKALIFICHGYAMECSIG--MNSTAIRLANEGYACYGIDYQG--HGKSA 80 (237)
Q Consensus 35 ~~~~~iv~~hG~~~~~~~~--~~~~~~~l~~~g~~v~~~d~~g--~G~s~ 80 (237)
+.+.+++++||.....-.. -..+...|...|..|-..-+|+ |+.+.
T Consensus 549 ~i~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p~e~H~~~~ 598 (620)
T COG1506 549 NIKTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVFPDEGHGFSR 598 (620)
T ss_pred ccCCCEEEEeecCCccCChHHHHHHHHHHHHcCceEEEEEeCCCCcCCCC
Confidence 3467799999986543321 1457788888888876666664 55554
No 318
>PF06833 MdcE: Malonate decarboxylase gamma subunit (MdcE); InterPro: IPR009648 This family consists of several bacterial malonate decarboxylase gamma subunit proteins. Malonate decarboxylase of Klebsiella pneumoniae consists of four different subunits and catalyses the conversion of malonate plus H+ to acetate and CO2. The catalysis proceeds via acetyl and malonyl thioester residues with the phosphribosyl-dephospho-CoA prosthetic group of the acyl carrier protein (ACP) subunit. MdcD and E together probably function as malonyl-S-ACP decarboxylase []. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. In the malonate decarboxylase complex, the beta subunit appears to act as a malonyl-CoA decarboxylase, while the gamma subunit appears either to mediate subunit interaction or to act as a co-decarboxylase with the beta subunit. The beta and gamma subunits exhibit some local sequence similarity.
Probab=37.75 E-value=99 Score=23.75 Aligned_cols=62 Identities=10% Similarity=0.100 Sum_probs=39.2
Q ss_pred CEEEEeecCCCCCCCCCCCCcCChhhHHHHHHHHHHHHHhhhhcCCceEEEEEeccchH-HHHHHHh
Q 026555 66 YACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEKEENKEKMRYLLGESMGGA-MVLLLHR 131 (237)
Q Consensus 66 ~~v~~~d~~g~G~s~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~-~a~~~a~ 131 (237)
--|+.+|-+|+..+..+ ....+......+...+... +....+-=-.++|++++|. ++.-+.+
T Consensus 66 pIv~lVD~~sQa~grre--EllGi~~alAhla~a~a~A--R~~GHpvI~Lv~G~A~SGaFLA~GlqA 128 (234)
T PF06833_consen 66 PIVALVDVPSQAYGRRE--ELLGINQALAHLAKAYALA--RLAGHPVIGLVYGKAMSGAFLAHGLQA 128 (234)
T ss_pred CEEEEEeCCccccchHH--HHhhHHHHHHHHHHHHHHH--HHcCCCeEEEEecccccHHHHHHHHHh
Confidence 45788999998877643 2245666667777777666 3332222335999999874 4444443
No 319
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=37.73 E-value=48 Score=24.88 Aligned_cols=25 Identities=20% Similarity=0.235 Sum_probs=21.1
Q ss_pred CCceEEEEEeccchHHHHHHHhcCC
Q 026555 110 KEKMRYLLGESMGGAMVLLLHRKKP 134 (237)
Q Consensus 110 ~~~~~~l~G~S~Gg~~a~~~a~~~p 134 (237)
+...-.+.|.|.|+.++..++...+
T Consensus 24 g~~~d~i~GtS~GAl~aa~~a~~~~ 48 (215)
T cd07209 24 GIEPDIISGTSIGAINGALIAGGDP 48 (215)
T ss_pred CCCCCEEEEECHHHHHHHHHHcCCc
Confidence 4456689999999999999998764
No 320
>COG3933 Transcriptional antiterminator [Transcription]
Probab=37.58 E-value=2e+02 Score=24.58 Aligned_cols=75 Identities=23% Similarity=0.217 Sum_probs=47.9
Q ss_pred CCcEEEEEEcCCCCCCcCchHHHHHHHHhcCCEEEEeecCCCCCCCCCCCCcCChhhHHHHHHHHHHHHHhhhhcCCceE
Q 026555 35 EPKALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEKEENKEKMR 114 (237)
Q Consensus 35 ~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 114 (237)
+.-.+||+.||....+.+ -.++..|-+.+ -+.++|+|= .-+.++..+.+.+.++.. +..+=
T Consensus 107 ~~v~vIiiAHG~sTASSm--aevanrLL~~~-~~~aiDMPL----------dvsp~~vle~l~e~~k~~------~~~~G 167 (470)
T COG3933 107 PRVKVIIIAHGYSTASSM--AEVANRLLGEE-IFIAIDMPL----------DVSPSDVLEKLKEYLKER------DYRSG 167 (470)
T ss_pred CceeEEEEecCcchHHHH--HHHHHHHhhcc-ceeeecCCC----------cCCHHHHHHHHHHHHHhc------CccCc
Confidence 345789999998766552 46777777763 478899871 024555555555555544 55565
Q ss_pred EEEEeccchHHHHH
Q 026555 115 YLLGESMGGAMVLL 128 (237)
Q Consensus 115 ~l~G~S~Gg~~a~~ 128 (237)
.++=-.||......
T Consensus 168 lllLVDMGSL~~f~ 181 (470)
T COG3933 168 LLLLVDMGSLTSFG 181 (470)
T ss_pred eEEEEecchHHHHH
Confidence 55556888866653
No 321
>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]
Probab=37.11 E-value=1.8e+02 Score=21.93 Aligned_cols=33 Identities=24% Similarity=0.259 Sum_probs=23.8
Q ss_pred EEEEcCCCCCCcCchHHHHHHHHhcCCEEEEeecCC
Q 026555 40 IFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQG 75 (237)
Q Consensus 40 iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g 75 (237)
+..+-|.+ +..- +.++..|+++|++|.+.|+..
T Consensus 16 ~~~vtGg~--sGIG-rAia~~la~~Garv~v~dl~~ 48 (256)
T KOG1200|consen 16 VAAVTGGS--SGIG-RAIAQLLAKKGARVAVADLDS 48 (256)
T ss_pred eeEEecCC--chHH-HHHHHHHHhcCcEEEEeecch
Confidence 44444433 3334 789999999999999998764
No 322
>PF14253 AbiH: Bacteriophage abortive infection AbiH
Probab=37.08 E-value=22 Score=27.62 Aligned_cols=15 Identities=20% Similarity=0.310 Sum_probs=12.8
Q ss_pred CCceEEEEEeccchH
Q 026555 110 KEKMRYLLGESMGGA 124 (237)
Q Consensus 110 ~~~~~~l~G~S~Gg~ 124 (237)
+...|+++|||+|..
T Consensus 233 ~i~~I~i~GhSl~~~ 247 (270)
T PF14253_consen 233 DIDEIIIYGHSLGEV 247 (270)
T ss_pred CCCEEEEEeCCCchh
Confidence 567899999999974
No 323
>PRK10867 signal recognition particle protein; Provisional
Probab=36.99 E-value=2.7e+02 Score=23.78 Aligned_cols=68 Identities=16% Similarity=0.234 Sum_probs=36.7
Q ss_pred HHHhcCCEEEEeecCCCCCCCCCCCCcCChhhHHHHHHHHHHHHHhhhhcCCceEEEEEeccchHHHHHHHhcCCC--cc
Q 026555 60 RLANEGYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPD--YF 137 (237)
Q Consensus 60 ~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~--~~ 137 (237)
.....+|.++.+|-+|....+ +.....+..+.+.+ .+..++++--++-|.-+...+..+.+ .+
T Consensus 178 ~a~~~~~DvVIIDTaGrl~~d---------~~lm~eL~~i~~~v------~p~evllVlda~~gq~av~~a~~F~~~~~i 242 (433)
T PRK10867 178 EAKENGYDVVIVDTAGRLHID---------EELMDELKAIKAAV------NPDEILLVVDAMTGQDAVNTAKAFNEALGL 242 (433)
T ss_pred HHHhcCCCEEEEeCCCCcccC---------HHHHHHHHHHHHhh------CCCeEEEEEecccHHHHHHHHHHHHhhCCC
Confidence 334457999999988765321 23344444444444 34445555555555555555544322 25
Q ss_pred cEEEE
Q 026555 138 DGAVL 142 (237)
Q Consensus 138 ~~~vl 142 (237)
.++|+
T Consensus 243 ~giIl 247 (433)
T PRK10867 243 TGVIL 247 (433)
T ss_pred CEEEE
Confidence 56665
No 324
>PF09370 TIM-br_sig_trns: TIM-barrel signal transduction protein; InterPro: IPR009215 Members of this family are predicted to have a TIM barrel fold, based on PSI-BLAST analysis (iteration 4) and on SCOP prediction (using SMART). Interestingly, this novel domain also exists as an N-terminal domain of sigma54-dependent transcriptional activators (enhancer-binding proteins). Because sigma54 dependent activators typically have a three-domain structure: the variable N-terminal regulatory (activation) domain involved in signal recognition/receiving, the central AAA-type ATPase domain, and the DNA-binding domain (see PIRSF003187 from PIRSF, PIRSF005263 from PIRSF, PIRSF003184 from PIRSF, PIRSF005263 from PIRSF, IPR014443 from INTERPRO for details), the proteins of the current entry may be predicted to play a role in signal recognition/receiving and signal transduction.; PDB: 2P10_C.
Probab=36.99 E-value=1.6e+02 Score=23.08 Aligned_cols=88 Identities=14% Similarity=0.126 Sum_probs=46.7
Q ss_pred HHHHHHHHhcCCEEEEeecCC-CCCCCCCCCCcCChhhHHHHHHHHHHHHHhhhhcCCceEEEEEeccchHHHH----HH
Q 026555 55 NSTAIRLANEGYACYGIDYQG-HGKSAGLSGYIDNFDDLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVL----LL 129 (237)
Q Consensus 55 ~~~~~~l~~~g~~v~~~d~~g-~G~s~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~----~~ 129 (237)
...++.+++.|..++++.+-- .|-+.+.... .++++.++.+.++.+...+ -...++++.| ||.++. .+
T Consensus 160 ~e~A~~M~~AGaDiiv~H~GlT~gG~~Ga~~~-~sl~~a~~~~~~i~~aa~~----v~~dii~l~h--GGPI~~p~D~~~ 232 (268)
T PF09370_consen 160 EEQARAMAEAGADIIVAHMGLTTGGSIGAKTA-LSLEEAAERIQEIFDAARA----VNPDIIVLCH--GGPIATPEDAQY 232 (268)
T ss_dssp HHHHHHHHHHT-SEEEEE-SS----------S---HHHHHHHHHHHHHHHHC----C-TT-EEEEE--CTTB-SHHHHHH
T ss_pred HHHHHHHHHcCCCEEEecCCccCCCCcCcccc-CCHHHHHHHHHHHHHHHHH----hCCCeEEEEe--CCCCCCHHHHHH
Confidence 456778888899888887621 1222222222 4677777777777776622 3456777777 887763 44
Q ss_pred HhcCCCcccEEEEcCCcccc
Q 026555 130 HRKKPDYFDGAVLVAPMCKI 149 (237)
Q Consensus 130 a~~~p~~~~~~vl~~~~~~~ 149 (237)
..++-+.+.+.+--|+.-.+
T Consensus 233 ~l~~t~~~~Gf~G~Ss~ERl 252 (268)
T PF09370_consen 233 VLRNTKGIHGFIGASSMERL 252 (268)
T ss_dssp HHHH-TTEEEEEESTTTTHH
T ss_pred HHhcCCCCCEEecccchhhc
Confidence 44444447888876665444
No 325
>COG5023 Tubulin [Cytoskeleton]
Probab=36.73 E-value=2.1e+02 Score=23.82 Aligned_cols=61 Identities=20% Similarity=0.330 Sum_probs=39.2
Q ss_pred hhHHHHHHHHHHHHHhhhhcCCceEEEEEeccchH--------HHHHHHhcCCCcccEEEEcCCccccccc
Q 026555 90 DDLVDDCFNHFTSICEKEENKEKMRYLLGESMGGA--------MVLLLHRKKPDYFDGAVLVAPMCKIAEN 152 (237)
Q Consensus 90 ~~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~--------~a~~~a~~~p~~~~~~vl~~~~~~~~~~ 152 (237)
+.+++|+.+.|+.. ....+.-+-+++=||+||. +.-.+..++|+++..-..+-|.....+.
T Consensus 110 ~e~~ddvmd~Irre--Ad~cD~LqGF~l~HS~gGGTGSG~GslLLerl~~eypkK~~~tfSV~P~p~~Sd~ 178 (443)
T COG5023 110 KEIIDDVMDMIRRE--ADGCDGLQGFLLLHSLGGGTGSGLGSLLLERLREEYPKKIKLTFSVFPAPKVSDV 178 (443)
T ss_pred HHHHHHHHHHHHHH--hhcCccccceeeeeeccCcCcccHHHHHHHHHHHhcchhheeEEEeccCCccCcc
Confidence 56677777777765 2233445667777886653 3335556789888877777776555443
No 326
>COG3887 Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain [Signal transduction mechanisms]
Probab=36.43 E-value=97 Score=27.39 Aligned_cols=51 Identities=10% Similarity=0.197 Sum_probs=34.8
Q ss_pred hHHHHHHHHHHHHHhhhhcCCceEEEEEe------ccchHHHHHHHhcCCCcccEEEEcCCc
Q 026555 91 DLVDDCFNHFTSICEKEENKEKMRYLLGE------SMGGAMVLLLHRKKPDYFDGAVLVAPM 146 (237)
Q Consensus 91 ~~~~d~~~~~~~~~~~~~~~~~~~~l~G~------S~Gg~~a~~~a~~~p~~~~~~vl~~~~ 146 (237)
.-++++..+++..+. ..++|+++|| +.|+.+++...+...++ ++-+.+.|.
T Consensus 321 vRaRvis~al~d~i~----e~d~VfImGHk~pDmDalGsAig~~~~A~~~~~-~a~~v~dp~ 377 (655)
T COG3887 321 VRARVISTALSDIIK----ESDNVFIMGHKFPDMDALGSAIGMQKFASMNNK-EAFAVLDPE 377 (655)
T ss_pred HHHHHHHHHHHHHHh----hcCcEEEEccCCCChHHHHHHHHHHHHHHhccc-ccEEEECcc
Confidence 336667777766643 4689999999 48999998776655444 555555543
No 327
>PRK13690 hypothetical protein; Provisional
Probab=36.31 E-value=82 Score=22.96 Aligned_cols=33 Identities=15% Similarity=0.286 Sum_probs=26.0
Q ss_pred ChhhHHHHHHHHHHHHHhhhhcCCceEEEEEec
Q 026555 88 NFDDLVDDCFNHFTSICEKEENKEKMRYLLGES 120 (237)
Q Consensus 88 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S 120 (237)
+++++-+++..+++.+++.......+++++|-|
T Consensus 2 ~~~~i~~~~~~~~~El~~~a~l~~g~i~VvGcS 34 (184)
T PRK13690 2 DLEEIKKQTRQILEELLEQANLKPGQIFVLGCS 34 (184)
T ss_pred CHHHHHHHHHHHHHHHHHhhCCCCCCEEEEecc
Confidence 345667788888888877667778899999998
No 328
>KOG1969 consensus DNA replication checkpoint protein CHL12/CTF18 [Cell cycle control, cell division, chromosome partitioning; Replication, recombination and repair]
Probab=35.81 E-value=2.1e+02 Score=26.39 Aligned_cols=36 Identities=22% Similarity=0.286 Sum_probs=26.3
Q ss_pred CCcEEEEEEcCCCCCCcCchHHHHHHHHhc-CCEEEEeec
Q 026555 35 EPKALIFICHGYAMECSIGMNSTAIRLANE-GYACYGIDY 73 (237)
Q Consensus 35 ~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~-g~~v~~~d~ 73 (237)
.|..-|+++||-++-+. ..++...+++ ||+|+-++-
T Consensus 323 RP~kKilLL~GppGlGK---TTLAHViAkqaGYsVvEINA 359 (877)
T KOG1969|consen 323 RPPKKILLLCGPPGLGK---TTLAHVIAKQAGYSVVEINA 359 (877)
T ss_pred CCccceEEeecCCCCCh---hHHHHHHHHhcCceEEEecc
Confidence 34456999999888777 4566666554 999998874
No 329
>cd01521 RHOD_PspE2 Member of the Rhodanese Homology Domain superfamily. This CD includes the putative rhodanese-like protein, Psp2, of Yersinia pestis biovar Medievalis and other similar uncharacterized proteins.
Probab=35.74 E-value=1.2e+02 Score=19.72 Aligned_cols=34 Identities=21% Similarity=0.435 Sum_probs=21.1
Q ss_pred CCcEEEEEEcCCCCCCcCchHHHHHHHHhcCCEEEEe
Q 026555 35 EPKALIFICHGYAMECSIGMNSTAIRLANEGYACYGI 71 (237)
Q Consensus 35 ~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~ 71 (237)
+..++||++.+.... .. ...+..|.+.||.+..+
T Consensus 63 ~~~~vvvyc~~g~~~--~s-~~~a~~l~~~G~~v~~l 96 (110)
T cd01521 63 KEKLFVVYCDGPGCN--GA-TKAALKLAELGFPVKEM 96 (110)
T ss_pred CCCeEEEEECCCCCc--hH-HHHHHHHHHcCCeEEEe
Confidence 346788888753211 12 45667888889986544
No 330
>cd01523 RHOD_Lact_B Member of the Rhodanese Homology Domain superfamily. This CD includes predicted proteins with rhodanese-like domains found N-terminal of the metallo-beta-lactamase domain.
Probab=35.33 E-value=1e+02 Score=19.47 Aligned_cols=29 Identities=24% Similarity=0.374 Sum_probs=19.1
Q ss_pred CCcEEEEEEcCCCCCCcCchHHHHHHHHhcCCEE
Q 026555 35 EPKALIFICHGYAMECSIGMNSTAIRLANEGYAC 68 (237)
Q Consensus 35 ~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v 68 (237)
+.+++|++|+.... . ...+..|.+.||.+
T Consensus 60 ~~~~ivv~C~~G~r----s-~~aa~~L~~~G~~~ 88 (100)
T cd01523 60 DDQEVTVICAKEGS----S-QFVAELLAERGYDV 88 (100)
T ss_pred CCCeEEEEcCCCCc----H-HHHHHHHHHcCcee
Confidence 34678888874321 2 45677888889983
No 331
>COG3870 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=35.11 E-value=1e+02 Score=20.11 Aligned_cols=72 Identities=19% Similarity=0.175 Sum_probs=43.8
Q ss_pred HHHHHHHHhcCCEEEEeecCCCCCCCCCCCC-cCChhhHHHHHHHHHHHHHhhhhcCCceEEEEEeccchHHH
Q 026555 55 NSTAIRLANEGYACYGIDYQGHGKSAGLSGY-IDNFDDLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMV 126 (237)
Q Consensus 55 ~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a 126 (237)
..+.+.|.++||++--.---|--.-.+.... ...-++.++.+..+|+..+...+.-..++..+|-|.++++.
T Consensus 14 ~~l~~~L~d~~fraTkLAsTGGFlkaGNTTfliGved~~vd~~~s~Ike~C~~req~v~~~~~~~~sa~~yvp 86 (109)
T COG3870 14 NELEDALTDKNFRATKLASTGGFLKAGNTTFLIGVEDDRVDALRSLIKENCKSREQLVTPISPMGGSADSYVP 86 (109)
T ss_pred HHHHHHHHhCCceeEEeeccCceeecCCeEEEEecccchhHHHHHHHHHHhhhHhhccCCCCccCCCCCcccc
Confidence 6789999999998865443332111111111 11235667788888887765444455677777888777653
No 332
>PF08433 KTI12: Chromatin associated protein KTI12 ; InterPro: IPR013641 This is a family of chromatin associated proteins which interact with the Elongator complex, a component of the elongating form of RNA polymerase II []. The Elongator complex has histone acetyltransferase activity. ; PDB: 3ADB_B 3ADC_B 3A4M_B 3A4N_B 3AM1_A 3A4L_B 3ADD_A.
Probab=34.36 E-value=1.3e+02 Score=23.66 Aligned_cols=39 Identities=15% Similarity=0.102 Sum_probs=23.6
Q ss_pred EEEEEcCCCCCCcCch-HHHHHHHHhcCCEEEEeecCCCC
Q 026555 39 LIFICHGYAMECSIGM-NSTAIRLANEGYACYGIDYQGHG 77 (237)
Q Consensus 39 ~iv~~hG~~~~~~~~~-~~~~~~l~~~g~~v~~~d~~g~G 77 (237)
++|++=|+++++...+ ..+.+.|.+.++.|..++-...+
T Consensus 2 pLiil~G~P~SGKTt~a~~L~~~~~~~~~~v~~i~~~~~~ 41 (270)
T PF08433_consen 2 PLIILCGLPCSGKTTRAKELKKYLEEKGKEVVIISDDSLG 41 (270)
T ss_dssp -EEEEE--TTSSHHHHHHHHHHHHHHTT--EEEE-THHHH
T ss_pred EEEEEEcCCCCcHHHHHHHHHHHHHhcCCEEEEEcccccc
Confidence 4788889999988542 46677777788998888754444
No 333
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=34.19 E-value=2.9e+02 Score=23.39 Aligned_cols=67 Identities=18% Similarity=0.296 Sum_probs=46.0
Q ss_pred HHHHHHHHhcCCEEEEeecCCCCCCCCCCCCcCChhhHHHHHHHHHHHHHhhhhcCCceEEEEEeccchHHHHHHHhcCC
Q 026555 55 NSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKP 134 (237)
Q Consensus 55 ~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p 134 (237)
+..+..|.+.|..|+++-- .+.+++.+.+..++++. +.++-+++ .-||.+...+...+|
T Consensus 75 d~vaa~l~~~gi~v~a~~~-------------~~~~~y~~~~~~~l~~~------~~~p~~i~--DdGg~~~~~~~~~~~ 133 (413)
T cd00401 75 DHAAAAIAAAGIPVFAWKG-------------ETLEEYWWCIEQALKFP------DGEPNMIL--DDGGDLTLLIHKKHP 133 (413)
T ss_pred HHHHHHHHhcCceEEEEcC-------------CCHHHHHHHHHHHHhcc------CCCCcEEE--ecchHHHHHHHhhhh
Confidence 6788888888888877532 24566666677777654 34565555 889988888877777
Q ss_pred CcccEEEE
Q 026555 135 DYFDGAVL 142 (237)
Q Consensus 135 ~~~~~~vl 142 (237)
+..+.++-
T Consensus 134 ~~~~~~~G 141 (413)
T cd00401 134 ELLPGIRG 141 (413)
T ss_pred hhhhccEE
Confidence 66555544
No 334
>KOG0780 consensus Signal recognition particle, subunit Srp54 [Intracellular trafficking, secretion, and vesicular transport]
Probab=34.03 E-value=2.6e+02 Score=23.61 Aligned_cols=19 Identities=21% Similarity=0.357 Sum_probs=14.6
Q ss_pred HHHHHhcCCEEEEeecCCC
Q 026555 58 AIRLANEGYACYGIDYQGH 76 (237)
Q Consensus 58 ~~~l~~~g~~v~~~d~~g~ 76 (237)
.+.+.+++|.+++.|-.|.
T Consensus 176 v~~fKke~fdvIIvDTSGR 194 (483)
T KOG0780|consen 176 VDRFKKENFDVIIVDTSGR 194 (483)
T ss_pred HHHHHhcCCcEEEEeCCCc
Confidence 4677788899999997653
No 335
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=34.03 E-value=75 Score=22.83 Aligned_cols=25 Identities=16% Similarity=0.199 Sum_probs=20.5
Q ss_pred CCceEEEEEeccchHHHHHHHhcCC
Q 026555 110 KEKMRYLLGESMGGAMVLLLHRKKP 134 (237)
Q Consensus 110 ~~~~~~l~G~S~Gg~~a~~~a~~~p 134 (237)
+...=.+.|-|.|+.++..++...+
T Consensus 26 g~~~d~i~GtSaGAi~aa~~a~g~~ 50 (175)
T cd07228 26 GIEIDIIAGSSIGALVGALYAAGHL 50 (175)
T ss_pred CCCeeEEEEeCHHHHHHHHHHcCCC
Confidence 4556789999999999999987654
No 336
>COG3580 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=33.96 E-value=2.6e+02 Score=22.68 Aligned_cols=38 Identities=13% Similarity=0.224 Sum_probs=29.6
Q ss_pred cEEEEEEcCCCCCCcCchHHHHHHHHhcCCEEEEeecCC
Q 026555 37 KALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQG 75 (237)
Q Consensus 37 ~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g 75 (237)
..+|+.-|.+--+.+.- ..+.+.+...|+.|+..|-..
T Consensus 203 ~gVvLaGrPYh~DpeiN-hgI~e~i~~~g~~IlTedsI~ 240 (351)
T COG3580 203 KGVVLAGRPYHFDPEIN-HGIPEKINSRGIPILTEDSIP 240 (351)
T ss_pred eeEEEeCCccccCcccc-cchHHHHhhcCCeeeecccch
Confidence 55666678886666666 678899999999999988654
No 337
>PRK06523 short chain dehydrogenase; Provisional
Probab=33.87 E-value=2.1e+02 Score=21.70 Aligned_cols=32 Identities=16% Similarity=0.088 Sum_probs=23.4
Q ss_pred EEEEcCCCCCCcCchHHHHHHHHhcCCEEEEeecC
Q 026555 40 IFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQ 74 (237)
Q Consensus 40 iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 74 (237)
.+++-|..+... ..+++.|.++|++|+..+..
T Consensus 11 ~vlItGas~gIG---~~ia~~l~~~G~~v~~~~r~ 42 (260)
T PRK06523 11 RALVTGGTKGIG---AATVARLLEAGARVVTTARS 42 (260)
T ss_pred EEEEECCCCchh---HHHHHHHHHCCCEEEEEeCC
Confidence 556666444333 68899999999999988764
No 338
>TIGR01626 ytfJ_HI0045 conserved hypothetical protein YtfJ-family, TIGR01626. This model represents sequences from gamma proteobacteria that are related to the E. coli protein, YtfJ.
Probab=33.86 E-value=1.9e+02 Score=21.25 Aligned_cols=53 Identities=8% Similarity=-0.025 Sum_probs=37.7
Q ss_pred CCcEEEEEEeecCCC-CCcEEEEEEcCCCCCCcCchHHHHHHHHhcCCEE------EEeec
Q 026555 20 RRVKLFTCSWIPQNQ-EPKALIFICHGYAMECSIGMNSTAIRLANEGYAC------YGIDY 73 (237)
Q Consensus 20 ~g~~l~~~~~~~~~~-~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v------~~~d~ 73 (237)
+|..+.|..|....- +.-..|-++-|+...++.. .++..++.+.|+.+ +.++.
T Consensus 43 ~~~~~~y~~~~~~~l~GKV~lvn~~Aswc~~c~~e-~P~l~~l~~~~~~~~~y~~t~~IN~ 102 (184)
T TIGR01626 43 SGKDTVYQPWGSAELAGKVRVVHHIAGRTSAKEXN-ASLIDAIKAAKFPPVKYQTTTIINA 102 (184)
T ss_pred cCCcccceeccHHHcCCCEEEEEEEecCCChhhcc-chHHHHHHHcCCCcccccceEEEEC
Confidence 556788888865532 2224555666888888878 78899998888877 66663
No 339
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc
Probab=33.81 E-value=77 Score=22.69 Aligned_cols=24 Identities=17% Similarity=0.108 Sum_probs=19.6
Q ss_pred CCceEEEEEeccchHHHHHHHhcC
Q 026555 110 KEKMRYLLGESMGGAMVLLLHRKK 133 (237)
Q Consensus 110 ~~~~~~l~G~S~Gg~~a~~~a~~~ 133 (237)
+...-.+.|-|.|+.++..++...
T Consensus 26 ~~~~d~i~GtSaGal~a~~~a~g~ 49 (175)
T cd07205 26 GIPIDIVSGTSAGAIVGALYAAGY 49 (175)
T ss_pred CCCeeEEEEECHHHHHHHHHHcCC
Confidence 345668999999999999998654
No 340
>PF03205 MobB: Molybdopterin guanine dinucleotide synthesis protein B; PDB: 2F1R_B 1P9N_A 1NP6_B 2NPI_A 1XJC_A.
Probab=33.75 E-value=86 Score=21.74 Aligned_cols=41 Identities=17% Similarity=0.150 Sum_probs=26.4
Q ss_pred EEEEcCCCCCCcC-chHHHHHHHHhcCCEEEEeecCCCCCCC
Q 026555 40 IFICHGYAMECSI-GMNSTAIRLANEGYACYGIDYQGHGKSA 80 (237)
Q Consensus 40 iv~~hG~~~~~~~-~~~~~~~~l~~~g~~v~~~d~~g~G~s~ 80 (237)
+|.+-|...+... ....+.+.|.++||+|.++-.-+||...
T Consensus 2 vv~VvG~~~sGKTTl~~~Li~~l~~~g~~v~~ik~~~~g~~~ 43 (140)
T PF03205_consen 2 VVQVVGPKNSGKTTLIRKLINELKRRGYRVAVIKHTDHGQFE 43 (140)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHHHHTT--EEEEEE-STTSTT
T ss_pred EEEEECCCCCCHHHHHHHHHHHHhHcCCceEEEEEccCCCcc
Confidence 5666666666554 3467889999999999877666776554
No 341
>PF00004 AAA: ATPase family associated with various cellular activities (AAA); InterPro: IPR003959 AAA ATPases (ATPases Associated with diverse cellular Activities) form a large protein family and play a number of roles in the cell including cell-cycle regulation, protein proteolysis and disaggregation, organelle biogenesis and intracellular transport. Some of them function as molecular chaperones, subunits of proteolytic complexes or independent proteases (FtsH, Lon). They also act as DNA helicases and transcription factors []. AAA ATPases belong to the AAA+ superfamily of ringshaped P-loop NTPases, which act via the energy-dependent unfolding of macromolecules [, ]. There are six major clades of AAA domains (proteasome subunits, metalloproteases, domains D1 and D2 of ATPases with two AAA domains, the MSP1/katanin/spastin group and BCS1 and it homologues), as well as a number of deeply branching minor clades []. They assemble into oligomeric assemblies (often hexamers) that form a ring-shaped structure with a central pore. These proteins produce a molecular motor that couples ATP binding and hydrolysis to changes in conformational states that act upon a target substrate, either translocating or remodelling it []. They are found in all living organisms and share the common feature of the presence of a highly conserved AAA domain called the AAA module. This domain is responsible for ATP binding and hydrolysis. It contains 200-250 residues, among them there are two classical motifs, Walker A (GX4GKT) and Walker B (HyDE) []. The functional variety seen between AAA ATPases is in part due to their extensive number of accessory domains and factors, and to their variable organisation within oligomeric assemblies, in addition to changes in key functional residues within the ATPase domain itself. More information about these proteins can be found at Protein of the Month: AAA ATPases [].; GO: 0005524 ATP binding; PDB: 3H4M_A 1NSF_A 1D2N_A 1HQY_E 1DO0_E 1DO2_C 1G4B_E 1HT1_F 1G4A_F 1HT2_G ....
Probab=32.68 E-value=1.5e+02 Score=19.52 Aligned_cols=52 Identities=21% Similarity=0.153 Sum_probs=32.4
Q ss_pred EEEcCCCCCCcCchHHHHHHHHhc-CCEEEEeecCCCCCCCCCCCCcCChhhHHHHHHHHHHHH
Q 026555 41 FICHGYAMECSIGMNSTAIRLANE-GYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSI 103 (237)
Q Consensus 41 v~~hG~~~~~~~~~~~~~~~l~~~-g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~d~~~~~~~~ 103 (237)
|++||-.+.+. ..+++.+++. |+.++.+|......+ ...+....+..+++..
T Consensus 1 ill~G~~G~GK---T~l~~~la~~l~~~~~~i~~~~~~~~--------~~~~~~~~i~~~~~~~ 53 (132)
T PF00004_consen 1 ILLHGPPGTGK---TTLARALAQYLGFPFIEIDGSELISS--------YAGDSEQKIRDFFKKA 53 (132)
T ss_dssp EEEESSTTSSH---HHHHHHHHHHTTSEEEEEETTHHHTS--------STTHHHHHHHHHHHHH
T ss_pred CEEECcCCCCe---eHHHHHHHhhcccccccccccccccc--------cccccccccccccccc
Confidence 68899888877 4455555554 788888887654421 2234455666666665
No 342
>PLN02840 tRNA dimethylallyltransferase
Probab=32.14 E-value=3.1e+02 Score=23.31 Aligned_cols=65 Identities=17% Similarity=0.124 Sum_probs=39.2
Q ss_pred cEEEEEEcCCCCCCcCchHHHHHHHHhc-CCEEEEeecC----CC--CCCCC----------------CCCCcCChhhHH
Q 026555 37 KALIFICHGYAMECSIGMNSTAIRLANE-GYACYGIDYQ----GH--GKSAG----------------LSGYIDNFDDLV 93 (237)
Q Consensus 37 ~~~iv~~hG~~~~~~~~~~~~~~~l~~~-g~~v~~~d~~----g~--G~s~~----------------~~~~~~~~~~~~ 93 (237)
++.++++-|-.+++. ..++..|++. +..++..|-. |. |.... .....++..++.
T Consensus 20 ~~~vi~I~GptgsGK---Ttla~~La~~~~~~iis~Ds~qvYr~~~IgTaKpt~eE~~~V~Hhlidil~p~e~ySv~~F~ 96 (421)
T PLN02840 20 KEKVIVISGPTGAGK---SRLALELAKRLNGEIISADSVQVYRGLDVGSAKPSLSERKEVPHHLIDILHPSDDYSVGAFF 96 (421)
T ss_pred CCeEEEEECCCCCCH---HHHHHHHHHHCCCCeEeccccceecceeEEcCCCCHHHHcCCCeEeEeecCCCCceeHHHHH
Confidence 445777777666666 5666677665 4557777742 21 11110 122235678888
Q ss_pred HHHHHHHHHHH
Q 026555 94 DDCFNHFTSIC 104 (237)
Q Consensus 94 ~d~~~~~~~~~ 104 (237)
++..++++.+.
T Consensus 97 ~~A~~~I~~i~ 107 (421)
T PLN02840 97 DDARRATQDIL 107 (421)
T ss_pred HHHHHHHHHHH
Confidence 89998888873
No 343
>COG1763 MobB Molybdopterin-guanine dinucleotide biosynthesis protein [Coenzyme metabolism]
Probab=31.99 E-value=1.1e+02 Score=22.03 Aligned_cols=39 Identities=18% Similarity=0.208 Sum_probs=30.8
Q ss_pred EEEEEcCCCCCCcC-chHHHHHHHHhcCCEEEEeecCCCC
Q 026555 39 LIFICHGYAMECSI-GMNSTAIRLANEGYACYGIDYQGHG 77 (237)
Q Consensus 39 ~iv~~hG~~~~~~~-~~~~~~~~l~~~g~~v~~~d~~g~G 77 (237)
.|+=+=|+..++.. .+..+.+.|.++||+|-++-+.+|+
T Consensus 3 ~Il~ivG~k~SGKTTLie~lv~~L~~~G~rVa~iKH~hh~ 42 (161)
T COG1763 3 KILGIVGYKNSGKTTLIEKLVRKLKARGYRVATVKHAHHD 42 (161)
T ss_pred cEEEEEecCCCChhhHHHHHHHHHHhCCcEEEEEEecCCC
Confidence 35666677666664 3468899999999999999999987
No 344
>cd03145 GAT1_cyanophycinase Type 1 glutamine amidotransferase (GATase1)-like domain found in cyanophycinase. Type 1 glutamine amidotransferase (GATase1)-like domain found in cyanophycinase. This group contains proteins similar to the extracellular cyanophycinases from Pseudomonas anguilliseptica BI (CphE) and Synechocystis sp. PCC 6803 CphB. Cyanophycinases are intracellular exopeptidases which hydrolyze the polymer cyanophycin (multi L-arginyl-poly-L-aspartic acid) to the dipeptide beta-Asp-Arg. Cyanophycinase is believed to be a serine-type exopeptidase having a Ser-His-Glu catalytic triad which differs from the Cys-His-Glu catalytic triad typical of GATase1 domains by having a Ser in place of the reactive Cys at the nucleophile elbow.
Probab=31.92 E-value=1.4e+02 Score=22.41 Aligned_cols=39 Identities=10% Similarity=-0.133 Sum_probs=23.7
Q ss_pred CcEEEEEEcCCCCCCcCchHHHHHHHHhcCCE-EEEeecC
Q 026555 36 PKALIFICHGYAMECSIGMNSTAIRLANEGYA-CYGIDYQ 74 (237)
Q Consensus 36 ~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~-v~~~d~~ 74 (237)
..+.|++++--+.....+...+.+.|.+.|+. +..++..
T Consensus 28 ~~~~i~~iptA~~~~~~~~~~~~~~~~~lG~~~v~~~~~~ 67 (217)
T cd03145 28 AGARIVVIPAASEEPAEVGEEYRDVFERLGAREVEVLVID 67 (217)
T ss_pred CCCcEEEEeCCCcChhHHHHHHHHHHHHcCCceeEEeccC
Confidence 34557777655444443446677788887874 5555554
No 345
>KOG3349 consensus Predicted glycosyltransferase [General function prediction only]
Probab=31.34 E-value=1.4e+02 Score=21.31 Aligned_cols=53 Identities=26% Similarity=0.320 Sum_probs=34.8
Q ss_pred ecCCcEEEEEEeecCCCC--CcEEEEEEcCCCCCCcCch-------------------HHHHHHHHhcCCEEEE
Q 026555 18 NSRRVKLFTCSWIPQNQE--PKALIFICHGYAMECSIGM-------------------NSTAIRLANEGYACYG 70 (237)
Q Consensus 18 ~~~g~~l~~~~~~~~~~~--~~~~iv~~hG~~~~~~~~~-------------------~~~~~~l~~~g~~v~~ 70 (237)
..+|.++-|+.|.|.-.. ...-+|+-|+..+++-.-. .++++.|++.||-.++
T Consensus 59 k~~gl~id~y~f~psl~e~I~~AdlVIsHAGaGS~letL~l~KPlivVvNd~LMDNHQ~ELA~qL~~egyL~~C 132 (170)
T KOG3349|consen 59 KNGGLTIDGYDFSPSLTEDIRSADLVISHAGAGSCLETLRLGKPLIVVVNDSLMDNHQLELAKQLAEEGYLYYC 132 (170)
T ss_pred ccCCeEEEEEecCccHHHHHhhccEEEecCCcchHHHHHHcCCCEEEEeChHhhhhHHHHHHHHHHhcCcEEEe
Confidence 346788999999876211 1245788887766543211 4688999999986654
No 346
>PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B ....
Probab=31.14 E-value=32 Score=23.34 Aligned_cols=34 Identities=12% Similarity=-0.127 Sum_probs=23.4
Q ss_pred EEEEcCCCCCCcCchHHHHHHHHhcCCEEEEeecC
Q 026555 40 IFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQ 74 (237)
Q Consensus 40 iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 74 (237)
++...|.++|..-+ -.+++.|.++|++|...-.+
T Consensus 2 li~~~Gt~Ghv~P~-lala~~L~~rGh~V~~~~~~ 35 (139)
T PF03033_consen 2 LIATGGTRGHVYPF-LALARALRRRGHEVRLATPP 35 (139)
T ss_dssp EEEEESSHHHHHHH-HHHHHHHHHTT-EEEEEETG
T ss_pred EEEEcCChhHHHHH-HHHHHHHhccCCeEEEeecc
Confidence 45556666666655 68899999999998755443
No 347
>PRK13255 thiopurine S-methyltransferase; Reviewed
Probab=31.08 E-value=82 Score=23.79 Aligned_cols=29 Identities=14% Similarity=0.211 Sum_probs=19.3
Q ss_pred EEEEcCCCCCCcCchHHHHHHHHhcCCEEEEeecC
Q 026555 40 IFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQ 74 (237)
Q Consensus 40 iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 74 (237)
=||..|.|.. .-+..|+++||.|+++|.-
T Consensus 40 rvL~~gCG~G------~da~~LA~~G~~V~avD~s 68 (218)
T PRK13255 40 RVLVPLCGKS------LDMLWLAEQGHEVLGVELS 68 (218)
T ss_pred eEEEeCCCCh------HhHHHHHhCCCeEEEEccC
Confidence 3455565542 2245677889999999973
No 348
>TIGR00959 ffh signal recognition particle protein. This model represents Ffh (Fifty-Four Homolog), the protein component that forms the bacterial (and organellar) signal recognition particle together with a 4.5S RNA. Ffh is a GTPase homologous to eukaryotic SRP54 and also to the GTPase FtsY (TIGR00064) that is the receptor for the signal recognition particle.
Probab=31.05 E-value=3.3e+02 Score=23.15 Aligned_cols=69 Identities=14% Similarity=0.159 Sum_probs=37.4
Q ss_pred HHHhcCCEEEEeecCCCCCCCCCCCCcCChhhHHHHHHHHHHHHHhhhhcCCceEEEEEeccchHHHHHHHhcCC--Ccc
Q 026555 60 RLANEGYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKP--DYF 137 (237)
Q Consensus 60 ~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p--~~~ 137 (237)
.+...+|.++.+|-+|....+ +..+..+..+.+.+ ....++++--++-|.-+...|..+. -.+
T Consensus 177 ~~~~~~~DvVIIDTaGr~~~d---------~~l~~eL~~i~~~~------~p~e~lLVvda~tgq~~~~~a~~f~~~v~i 241 (428)
T TIGR00959 177 YAKENGFDVVIVDTAGRLQID---------EELMEELAAIKEIL------NPDEILLVVDAMTGQDAVNTAKTFNERLGL 241 (428)
T ss_pred HHHhcCCCEEEEeCCCccccC---------HHHHHHHHHHHHhh------CCceEEEEEeccchHHHHHHHHHHHhhCCC
Confidence 344567899999988764321 23445555554444 3445555555555555555554432 135
Q ss_pred cEEEEc
Q 026555 138 DGAVLV 143 (237)
Q Consensus 138 ~~~vl~ 143 (237)
.++|+-
T Consensus 242 ~giIlT 247 (428)
T TIGR00959 242 TGVVLT 247 (428)
T ss_pred CEEEEe
Confidence 566653
No 349
>PF03853 YjeF_N: YjeF-related protein N-terminus; InterPro: IPR004443 The YjeF N-terminal domains occur either as single proteins or fusions with other domains and are commonly associated with enzymes. In bacteria and archaea, YjeF N-terminal domains are often fused to a YjeF C-terminal domain with high structural homology to the members of a ribokinase-like superfamily (see PDOC00806 from PROSITEDOC)and/or belong to operons that encode enzymes of diverse functions: pyridoxal phosphate biosynthetic protein PdxJ; phosphopanteine-protein transferase; ATP/GTP hydrolase; and pyruvate-formate lyase 1-activating enzyme. In plants, the YjeF N-terminal domain is fused to a C-terminal putative pyridoxamine 5'-phosphate oxidase. In eukaryotes, proteins that consist of (Sm)-FDF-YjeF N-terminal domains may be involved in RNA processing [, ]. The YjeF N-terminal domains represent a novel version of the Rossmann fold, one of the most common protein folds in nature observed in numerous enzyme families, that has acquired a set of catalytic residues and structural features that distinguish them from the conventional dehydrogenases. The YjeF N-terminal domain is comprised of a three-layer alpha-beta-alpha sandwich with a central beta-sheet surrounded by helices. The conservation of the acidic residues in the predicted active site of the YjeF N-terminal domains is reminiscent of the presence of such residues in the active sites of diverse hydrolases [, ].; PDB: 3K5W_A 2O8N_A 2DG2_F 3RNO_A 1JZT_B 3D3K_A 3D3J_A 3RSG_A 3RT9_A 3RRF_A ....
Probab=30.56 E-value=53 Score=23.62 Aligned_cols=34 Identities=26% Similarity=0.230 Sum_probs=24.2
Q ss_pred CcEEEEEEcCCCCCCcCchHHHHHHHHhcCCEEEE
Q 026555 36 PKALIFICHGYAMECSIGMNSTAIRLANEGYACYG 70 (237)
Q Consensus 36 ~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~ 70 (237)
..+.|+++-|-|.+...- -..++.|.++|+.|.+
T Consensus 24 ~~~~v~il~G~GnNGgDg-l~~AR~L~~~G~~V~v 57 (169)
T PF03853_consen 24 KGPRVLILCGPGNNGGDG-LVAARHLANRGYNVTV 57 (169)
T ss_dssp TT-EEEEEE-SSHHHHHH-HHHHHHHHHTTCEEEE
T ss_pred CCCeEEEEECCCCChHHH-HHHHHHHHHCCCeEEE
Confidence 345677777777776644 4678999999999877
No 350
>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family. Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.
Probab=30.26 E-value=89 Score=23.49 Aligned_cols=28 Identities=14% Similarity=0.139 Sum_probs=19.2
Q ss_pred EEEEcCCCCCCcCchHHHHHHHHhcCCEEEEeec
Q 026555 40 IFICHGYAMECSIGMNSTAIRLANEGYACYGIDY 73 (237)
Q Consensus 40 iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~ 73 (237)
=+|..|.|.. .-+..|+++||.|+++|.
T Consensus 37 rvLd~GCG~G------~da~~LA~~G~~V~gvD~ 64 (213)
T TIGR03840 37 RVFVPLCGKS------LDLAWLAEQGHRVLGVEL 64 (213)
T ss_pred eEEEeCCCch------hHHHHHHhCCCeEEEEeC
Confidence 3455555542 335677889999999996
No 351
>KOG2872 consensus Uroporphyrinogen decarboxylase [Coenzyme transport and metabolism]
Probab=29.67 E-value=78 Score=25.18 Aligned_cols=30 Identities=30% Similarity=0.645 Sum_probs=23.9
Q ss_pred CcEEEEEEcCCCCCCcCchHHHHHHHHhcCCEEEEeec
Q 026555 36 PKALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDY 73 (237)
Q Consensus 36 ~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~ 73 (237)
+-|.|+|..|.+ ...+.++..||.|+..|+
T Consensus 251 ~vPmi~fakG~g--------~~Le~l~~tG~DVvgLDW 280 (359)
T KOG2872|consen 251 PVPMILFAKGSG--------GALEELAQTGYDVVGLDW 280 (359)
T ss_pred CCceEEEEcCcc--------hHHHHHHhcCCcEEeecc
Confidence 458899998843 345788899999999997
No 352
>COG0552 FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=29.66 E-value=3.2e+02 Score=22.43 Aligned_cols=76 Identities=18% Similarity=0.175 Sum_probs=48.0
Q ss_pred HHHHhcCCEEEEeecCCCCCCCCCCCCcCChhhHHHHHHHHHHHHHhhhhcCCceEEEEEeccchHHHHHHHhcCCC--c
Q 026555 59 IRLANEGYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPD--Y 136 (237)
Q Consensus 59 ~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~--~ 136 (237)
..-.++||.++.+|=-|.= .+-.++.+.+..+.+-+.......+..++++.-+.-|.-++..|+.+.+ .
T Consensus 215 ~~Akar~~DvvliDTAGRL---------hnk~nLM~EL~KI~rV~~k~~~~ap~e~llvlDAttGqnal~QAk~F~eav~ 285 (340)
T COG0552 215 QAAKARGIDVVLIDTAGRL---------HNKKNLMDELKKIVRVIKKDDPDAPHEILLVLDATTGQNALSQAKIFNEAVG 285 (340)
T ss_pred HHHHHcCCCEEEEeCcccc---------cCchhHHHHHHHHHHHhccccCCCCceEEEEEEcccChhHHHHHHHHHHhcC
Confidence 3334456888887754332 2445667777777666521111112347788799999999999987654 3
Q ss_pred ccEEEEc
Q 026555 137 FDGAVLV 143 (237)
Q Consensus 137 ~~~~vl~ 143 (237)
+.|+|+-
T Consensus 286 l~GiIlT 292 (340)
T COG0552 286 LDGIILT 292 (340)
T ss_pred CceEEEE
Confidence 7788874
No 353
>KOG0855 consensus Alkyl hydroperoxide reductase, thiol specific antioxidant and related enzymes [Posttranslational modification, protein turnover, chaperones]
Probab=29.46 E-value=2.2e+02 Score=20.65 Aligned_cols=57 Identities=7% Similarity=-0.024 Sum_probs=37.9
Q ss_pred ccceeEeecCCcEEEEEEeecCCCCCcEEEEEEcCCCCCCc------CchHHHHHHHHhcCCEEEEee
Q 026555 11 YDEEFILNSRRVKLFTCSWIPQNQEPKALIFICHGYAMECS------IGMNSTAIRLANEGYACYGID 72 (237)
Q Consensus 11 ~~~~~~~~~~g~~l~~~~~~~~~~~~~~~iv~~hG~~~~~~------~~~~~~~~~l~~~g~~v~~~d 72 (237)
.....+.+.||..|....+. +.+|+|+|.-.-.++.. .| +.-.+.|.+.|+.|+...
T Consensus 69 iPD~tL~dedg~sisLkkit----~nk~vV~f~YP~asTPGCTkQaCgF-RDnY~k~kka~aeV~GlS 131 (211)
T KOG0855|consen 69 IPDFTLKDEDGKSISLKKIT----GNKPVVLFFYPAASTPGCTKQACGF-RDNYEKFKKAGAEVIGLS 131 (211)
T ss_pred CCCcccccCCCCeeeeeeec----CCCcEEEEEeccCCCCCcccccccc-cccHHHHhhcCceEEeec
Confidence 34455678899999888773 33477887754433322 24 666688888889998664
No 354
>cd03129 GAT1_Peptidase_E_like Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E_like proteins. Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E_like proteins. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E and, extracellular cyanophycinases from Pseudomonas anguilliseptica BI (CphE) and Synechocystis sp. PCC 6803 CphB. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Cyanophycinases are intracellular exopeptidases which hydrolyze the polymer cyanophycin (multi L-arginyl-poly-L-aspartic acid) to the dipeptide beta-Asp-Arg. Peptidase E and cyanophycinases are thought to have a Ser-His-Glu catalytic triad which differs from
Probab=29.44 E-value=2.4e+02 Score=20.96 Aligned_cols=90 Identities=11% Similarity=-0.030 Sum_probs=46.8
Q ss_pred cEEEEEEcCCCCCCcCchHHHHHHHHhcCCEEEEeecCCCCCCCC------CCCCc----CChhhHHHHHHH--HHHHHH
Q 026555 37 KALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAG------LSGYI----DNFDDLVDDCFN--HFTSIC 104 (237)
Q Consensus 37 ~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~------~~~~~----~~~~~~~~d~~~--~~~~~~ 104 (237)
.+.|++++--......+...+.+.+.+.|..+..+.......... ..... .+...+.+-+.. .++.++
T Consensus 29 ~~~i~~iptA~~~~~~~~~~~~~~~~~lG~~~~~~~~~~~~~~~~~~~~l~~ad~I~~~GG~~~~~~~~l~~t~~~~~i~ 108 (210)
T cd03129 29 GARVLFIPTASGDRDEYGEEYRAAFERLGVEVVHLLLIDTANDPDVVARLLEADGIFVGGGNQLRLLSVLRETPLLDAIL 108 (210)
T ss_pred CCeEEEEeCCCCChHHHHHHHHHHHHHcCCceEEEeccCCCCCHHHHHHHhhCCEEEEcCCcHHHHHHHHHhCChHHHHH
Confidence 455777765554444444677788888888777655432211110 00000 111222222222 222331
Q ss_pred hhhhcCCceEEEEEeccchHHHHHH
Q 026555 105 EKEENKEKMRYLLGESMGGAMVLLL 129 (237)
Q Consensus 105 ~~~~~~~~~~~l~G~S~Gg~~a~~~ 129 (237)
+... +...++|.|.|+.+....
T Consensus 109 --~~~~-~G~v~~G~SAGA~~~~~~ 130 (210)
T cd03129 109 --KRVA-RGVVIGGTSAGAAVMGET 130 (210)
T ss_pred --HHHH-cCCeEEEcCHHHHHhhhc
Confidence 1112 568999999999998875
No 355
>KOG2495 consensus NADH-dehydrogenase (ubiquinone) [Energy production and conversion]
Probab=29.44 E-value=63 Score=27.34 Aligned_cols=64 Identities=11% Similarity=0.014 Sum_probs=37.3
Q ss_pred CCCCcEEEEEEc-CCCCCCcCchHHHHHHHHhcCCEEEEeecCCCCC-CC---CCCCCcCChhhHHHHHHHHHHH
Q 026555 33 NQEPKALIFICH-GYAMECSIGMNSTAIRLANEGYACYGIDYQGHGK-SA---GLSGYIDNFDDLVDDCFNHFTS 102 (237)
Q Consensus 33 ~~~~~~~iv~~h-G~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~-s~---~~~~~~~~~~~~~~d~~~~~~~ 102 (237)
++..++.||++. ||++ .++.+.|...-|+|.+++.|.|-. ++ ......-....+++-+.++.+.
T Consensus 51 ~~~kKk~vVVLGsGW~a------~S~lk~ldts~YdV~vVSPRnyFlFTPLLpS~~vGTve~rSIvEPIr~i~r~ 119 (491)
T KOG2495|consen 51 NGGKKKRVVVLGSGWGA------ISLLKKLDTSLYDVTVVSPRNYFLFTPLLPSTTVGTVELRSIVEPIRAIARK 119 (491)
T ss_pred CCCCCceEEEEcCchHH------HHHHHhccccccceEEeccccceEEeeccCCccccceeehhhhhhHHHHhhc
Confidence 334455566555 8765 467777777679999999999852 21 1111112344555666555543
No 356
>KOG2728 consensus Uncharacterized conserved protein with similarity to phosphopantothenoylcysteine synthetase/decarboxylase [General function prediction only]
Probab=29.35 E-value=2.4e+02 Score=22.01 Aligned_cols=50 Identities=12% Similarity=0.129 Sum_probs=32.2
Q ss_pred eeEeecCCcEEEEEEeecCCCCCcEEEEEEcCCCCCCcCchHHHHHHHHhcCCEEEEeecC
Q 026555 14 EFILNSRRVKLFTCSWIPQNQEPKALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQ 74 (237)
Q Consensus 14 ~~~~~~~g~~l~~~~~~~~~~~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 74 (237)
..+++++|+++... ..+|-|+-.+....+ - ..-+++|.+.||.|+..-..
T Consensus 33 IVlVTSGGTtVPLE---------~ntVRFiDNFSaGtR-G-AaSAE~Fl~agYaVIFl~R~ 82 (302)
T KOG2728|consen 33 IVLVTSGGTTVPLE---------QNTVRFIDNFSAGTR-G-AASAEYFLAAGYAVIFLYRE 82 (302)
T ss_pred EEEEecCCeEeecc---------cCceEeeeccCcCCc-c-chhHHHHHhCCceEEEEeec
Confidence 45667777665442 335888877654333 2 34478888999999876543
No 357
>COG1092 Predicted SAM-dependent methyltransferases [General function prediction only]
Probab=29.28 E-value=2.8e+02 Score=23.32 Aligned_cols=41 Identities=10% Similarity=-0.038 Sum_probs=26.3
Q ss_pred HHHHHHhcC--CEEEEeecCCCCCCCCCCCCcCChhhHHHHHHHHHHHH
Q 026555 57 TAIRLANEG--YACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSI 103 (237)
Q Consensus 57 ~~~~l~~~g--~~v~~~d~~g~G~s~~~~~~~~~~~~~~~d~~~~~~~~ 103 (237)
+.+.+.++| |.+++.|.|.++.|.... .+..+|...+++..
T Consensus 280 ~l~~~~~~g~~fDlIilDPPsF~r~k~~~------~~~~rdy~~l~~~~ 322 (393)
T COG1092 280 WLRKAERRGEKFDLIILDPPSFARSKKQE------FSAQRDYKDLNDLA 322 (393)
T ss_pred HHHHHHhcCCcccEEEECCcccccCcccc------hhHHHHHHHHHHHH
Confidence 345555543 999999999999887442 33344555555444
No 358
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=29.08 E-value=2.3e+02 Score=20.74 Aligned_cols=44 Identities=20% Similarity=0.123 Sum_probs=28.5
Q ss_pred CcEEEEEEcCCCCCCcCc--hHHHHHHHHhcCCEEEEeecC--CCCCC
Q 026555 36 PKALIFICHGYAMECSIG--MNSTAIRLANEGYACYGIDYQ--GHGKS 79 (237)
Q Consensus 36 ~~~~iv~~hG~~~~~~~~--~~~~~~~l~~~g~~v~~~d~~--g~G~s 79 (237)
..++++++||-....-.. -..+.+.|.+.|..+...-++ |||..
T Consensus 143 ~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH~~~ 190 (213)
T PF00326_consen 143 IKPPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGHGFG 190 (213)
T ss_dssp GGSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SSSTT
T ss_pred CCCCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCCCCC
Confidence 467899999976443322 146778888888766555555 45433
No 359
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=28.99 E-value=2.3e+02 Score=20.62 Aligned_cols=15 Identities=7% Similarity=0.140 Sum_probs=10.4
Q ss_pred hhhcCCceEEEEEec
Q 026555 106 KEENKEKMRYLLGES 120 (237)
Q Consensus 106 ~~~~~~~~~~l~G~S 120 (237)
+.+.+.++++++|-+
T Consensus 105 ~m~l~~~~vvmVGDq 119 (175)
T COG2179 105 EMNLPPEEVVMVGDQ 119 (175)
T ss_pred HcCCChhHEEEEcch
Confidence 445567788888875
No 360
>COG4088 Predicted nucleotide kinase [Nucleotide transport and metabolism]
Probab=28.86 E-value=69 Score=24.35 Aligned_cols=35 Identities=17% Similarity=0.207 Sum_probs=27.2
Q ss_pred EEEEEcCCCCCCcCch-HHHHHHHHhcCCEEEEeec
Q 026555 39 LIFICHGYAMECSIGM-NSTAIRLANEGYACYGIDY 73 (237)
Q Consensus 39 ~iv~~hG~~~~~~~~~-~~~~~~l~~~g~~v~~~d~ 73 (237)
+++++-|+++++...+ ..+++.|.+.+++|+...-
T Consensus 2 pLiIlTGyPgsGKTtfakeLak~L~~~i~~vi~l~k 37 (261)
T COG4088 2 PLIILTGYPGSGKTTFAKELAKELRQEIWRVIHLEK 37 (261)
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHhhhhccccch
Confidence 3788999999988543 5889999998888876543
No 361
>PRK13948 shikimate kinase; Provisional
Probab=28.69 E-value=76 Score=23.22 Aligned_cols=34 Identities=9% Similarity=0.003 Sum_probs=25.9
Q ss_pred cEEEEEEcCCCCCCcCchHHHHHHHHhc-CCEEEEeec
Q 026555 37 KALIFICHGYAMECSIGMNSTAIRLANE-GYACYGIDY 73 (237)
Q Consensus 37 ~~~iv~~hG~~~~~~~~~~~~~~~l~~~-g~~v~~~d~ 73 (237)
.+..|++.|+.++.. ..+.+.|++. |+.++-.|.
T Consensus 9 ~~~~I~LiG~~GsGK---STvg~~La~~lg~~~iD~D~ 43 (182)
T PRK13948 9 PVTWVALAGFMGTGK---SRIGWELSRALMLHFIDTDR 43 (182)
T ss_pred CCCEEEEECCCCCCH---HHHHHHHHHHcCCCEEECCH
Confidence 456888999988877 6777888764 888887774
No 362
>TIGR02816 pfaB_fam PfaB family protein. The protein PfaB is part of four gene locus, similar to polyketide biosynthesis systems, responsible for omega-3 polyunsaturated fatty acid biosynthesis in several high pressure and/or cold-adapted bacteria. The fairly permissive trusted cutoff set for this model allows detection of homologs encoded near homologs to other proteins of the locus: PfaA, PfaC, and/or PfaD. The likely role in every case is either polyunsaturated fatty acid or polyketide biosynthesis.
Probab=28.60 E-value=67 Score=28.11 Aligned_cols=26 Identities=27% Similarity=0.090 Sum_probs=21.0
Q ss_pred hcCCceEEEEEeccchHHHHHHHhcC
Q 026555 108 ENKEKMRYLLGESMGGAMVLLLHRKK 133 (237)
Q Consensus 108 ~~~~~~~~l~G~S~Gg~~a~~~a~~~ 133 (237)
..+.++-.++|||+|=..|+..|.-.
T Consensus 261 ~~GI~Pdav~GHSlGE~aAa~aAGvl 286 (538)
T TIGR02816 261 EFAIKPDFALGYSKGEASMWASLGVW 286 (538)
T ss_pred hcCCCCCEEeecCHHHHHHHHHhCCC
Confidence 45788999999999988887776544
No 363
>COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=28.47 E-value=1.2e+02 Score=24.47 Aligned_cols=36 Identities=19% Similarity=0.122 Sum_probs=26.1
Q ss_pred cEEEEEEcC-CCCCCcCc----hHHHHHHHHhcCCEEEEee
Q 026555 37 KALIFICHG-YAMECSIG----MNSTAIRLANEGYACYGID 72 (237)
Q Consensus 37 ~~~iv~~hG-~~~~~~~~----~~~~~~~l~~~g~~v~~~d 72 (237)
++.|++.|| -.+....| |..+++.+.+.|+.|+.+-
T Consensus 175 ~~~i~i~pg~s~~~~K~wp~e~~~~l~~~l~~~~~~Vvl~g 215 (334)
T COG0859 175 RPYIVINPGASRGSAKRWPLEHYAELAELLIAKGYQVVLFG 215 (334)
T ss_pred CCeEEEeccccccccCCCCHHHHHHHHHHHHHCCCEEEEec
Confidence 478999999 44344444 4778899999998887654
No 364
>KOG2170 consensus ATPase of the AAA+ superfamily [General function prediction only]
Probab=28.22 E-value=1.5e+02 Score=24.01 Aligned_cols=31 Identities=23% Similarity=0.243 Sum_probs=21.1
Q ss_pred CCcEEEEEEcCCCCCCcCchHH-HHHHHHhcC
Q 026555 35 EPKALIFICHGYAMECSIGMNS-TAIRLANEG 65 (237)
Q Consensus 35 ~~~~~iv~~hG~~~~~~~~~~~-~~~~l~~~g 65 (237)
..+|.++=+||+.++...|... +++.+...|
T Consensus 107 p~KPLvLSfHG~tGTGKN~Va~iiA~n~~~~G 138 (344)
T KOG2170|consen 107 PRKPLVLSFHGWTGTGKNYVAEIIAENLYRGG 138 (344)
T ss_pred CCCCeEEEecCCCCCchhHHHHHHHHHHHhcc
Confidence 4578899999999999966432 344444433
No 365
>COG1598 Predicted nuclease of the RNAse H fold, HicB family [General function prediction only]
Probab=27.81 E-value=1.4e+02 Score=17.93 Aligned_cols=37 Identities=14% Similarity=0.255 Sum_probs=25.7
Q ss_pred hcCCEEEEeecCCCCCCCCCCCCcCChhhHHHHHHHHHHHHHh
Q 026555 63 NEGYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICE 105 (237)
Q Consensus 63 ~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~d~~~~~~~~~~ 105 (237)
..+|-+..+|++|+-.-. .+.++...++..+++..+.
T Consensus 13 dg~y~~~~Pdlpgc~s~G------~T~eea~~n~~eai~l~~e 49 (73)
T COG1598 13 DGGYVASVPDLPGCHSQG------ETLEEALQNAKEAIELHLE 49 (73)
T ss_pred CCCEEEEeCCCCCccccC------CCHHHHHHHHHHHHHHHHH
Confidence 457889999999974321 3667777777777776543
No 366
>cd07230 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5. TGL4 and TGL5 are triacylglycerol lipases that are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. Tgl4 is a functional ortholog of mammalian adipose TG lipase (ATGL) and is phosphorylated and activated by cyclin-dependent kinase 1 (Cdk1/Cdc28). TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. This family includes TGL4 (STC1) and TGL5 (STC2) from Saccharomyces cerevisiae.
Probab=27.75 E-value=47 Score=28.01 Aligned_cols=27 Identities=19% Similarity=0.230 Sum_probs=21.8
Q ss_pred CCceEEEEEeccchHHHHHHHhcCCCc
Q 026555 110 KEKMRYLLGESMGGAMVLLLHRKKPDY 136 (237)
Q Consensus 110 ~~~~~~l~G~S~Gg~~a~~~a~~~p~~ 136 (237)
+..+-++.|-|.|+.+|..++...++.
T Consensus 99 gl~p~vIsGTSaGAivAal~as~~~ee 125 (421)
T cd07230 99 NLLPRIISGSSAGSIVAAILCTHTDEE 125 (421)
T ss_pred CCCCCEEEEECHHHHHHHHHHcCCHHH
Confidence 455668999999999999998865544
No 367
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=27.69 E-value=2.4e+02 Score=21.21 Aligned_cols=33 Identities=18% Similarity=0.179 Sum_probs=22.6
Q ss_pred EEEEcCCCCCCcCchHHHHHHHHhcCCEEEEeecCC
Q 026555 40 IFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQG 75 (237)
Q Consensus 40 iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g 75 (237)
.+++-|-.+... ..+++.|.++|++|+..+...
T Consensus 10 ~vlItGas~~iG---~~la~~l~~~G~~v~~~~~~~ 42 (252)
T PRK08220 10 TVWVTGAAQGIG---YAVALAFVEAGAKVIGFDQAF 42 (252)
T ss_pred EEEEeCCCchHH---HHHHHHHHHCCCEEEEEecch
Confidence 344444443333 678899999999999987653
No 368
>PRK12828 short chain dehydrogenase; Provisional
Probab=27.61 E-value=99 Score=22.98 Aligned_cols=31 Identities=23% Similarity=0.065 Sum_probs=23.0
Q ss_pred EEEEcCCCCCCcCchHHHHHHHHhcCCEEEEeec
Q 026555 40 IFICHGYAMECSIGMNSTAIRLANEGYACYGIDY 73 (237)
Q Consensus 40 iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~ 73 (237)
.+++.|-.+... ..+++.|.++|++|+..+.
T Consensus 9 ~vlItGatg~iG---~~la~~l~~~G~~v~~~~r 39 (239)
T PRK12828 9 VVAITGGFGGLG---RATAAWLAARGARVALIGR 39 (239)
T ss_pred EEEEECCCCcHh---HHHHHHHHHCCCeEEEEeC
Confidence 456666554433 6888999999999999886
No 369
>PF01734 Patatin: Patatin-like phospholipase This Prosite family is a subset of the Pfam family; InterPro: IPR002641 This domain is structurally and functionally related to the animal cytosolic phospholipase A2. This domain is found in the patatin glycoproteins from the total soluble protein in potato tubers []. Patatin is a storage protein but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids [].; GO: 0006629 lipid metabolic process; PDB: 3TU3_B 4AKX_B 1OXW_A.
Probab=27.20 E-value=70 Score=22.72 Aligned_cols=23 Identities=26% Similarity=0.300 Sum_probs=18.2
Q ss_pred CCceEEEEEeccchHHHHHHHhc
Q 026555 110 KEKMRYLLGESMGGAMVLLLHRK 132 (237)
Q Consensus 110 ~~~~~~l~G~S~Gg~~a~~~a~~ 132 (237)
....-.+.|-|.||.+++.++..
T Consensus 25 ~~~~d~i~GtS~Gal~a~~~~~~ 47 (204)
T PF01734_consen 25 GERFDVISGTSAGALNAALLALG 47 (204)
T ss_dssp CCT-SEEEEECCHHHHHHHHHTC
T ss_pred CCCccEEEEcChhhhhHHHHHhC
Confidence 44556799999999999888765
No 370
>PRK11613 folP dihydropteroate synthase; Provisional
Probab=27.03 E-value=3.2e+02 Score=21.70 Aligned_cols=57 Identities=18% Similarity=0.190 Sum_probs=28.8
Q ss_pred HHHHHHHHhcCCE--EEEeecCCCCCCCCCCCCcCChhhHHHHHHHHHHHHHhhhhcCCceEEEEEeccchHH
Q 026555 55 NSTAIRLANEGYA--CYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAM 125 (237)
Q Consensus 55 ~~~~~~l~~~g~~--v~~~d~~g~G~s~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~ 125 (237)
....+.+.+.|.. =+++|. |.|.+. +.++-. .+..-++.+. ...-.+++|+|-=..+
T Consensus 166 ~~~i~~a~~~GI~~~~IilDP-GiGF~k-------~~~~n~-~ll~~l~~l~-----~lg~Pilvg~SRKsfi 224 (282)
T PRK11613 166 IEQIARCEAAGIAKEKLLLDP-GFGFGK-------NLSHNY-QLLARLAEFH-----HFNLPLLVGMSRKSMI 224 (282)
T ss_pred HHHHHHHHHcCCChhhEEEeC-CCCcCC-------CHHHHH-HHHHHHHHHH-----hCCCCEEEEecccHHH
Confidence 4445566677874 567776 666543 122111 1222223331 2355778999854443
No 371
>PF09989 DUF2229: CoA enzyme activase uncharacterised domain (DUF2229); InterPro: IPR018709 Proteins containing this domain include various bacterial hypothetical proteins, as well as CoA enzyme activases. The exact function of this domain has not, as yet, been defined.
Probab=26.94 E-value=1e+02 Score=23.45 Aligned_cols=36 Identities=17% Similarity=0.231 Sum_probs=27.7
Q ss_pred cEEEEEEcCCCC-CCcCchHHHHHHHHhcCCEEEEeec
Q 026555 37 KALIFICHGYAM-ECSIGMNSTAIRLANEGYACYGIDY 73 (237)
Q Consensus 37 ~~~iv~~hG~~~-~~~~~~~~~~~~l~~~g~~v~~~d~ 73 (237)
..++|+-|.+.. +.... ..+.+.|.+.|+.|+..|+
T Consensus 184 ~~Ivl~GrpY~~~D~~in-~~I~~~l~~~G~~vit~d~ 220 (221)
T PF09989_consen 184 PAIVLLGRPYNIYDPFIN-MGIPDKLRSLGVPVITEDM 220 (221)
T ss_pred ceEEEEcCCCcCCCcccC-CchHHHHHHCCCeeeCccc
Confidence 356666688877 55555 5789999999999999885
No 372
>PLN02412 probable glutathione peroxidase
Probab=26.84 E-value=2.2e+02 Score=20.30 Aligned_cols=59 Identities=7% Similarity=0.051 Sum_probs=33.4
Q ss_pred ceeEeecCCcEEEEEEeecCCCCCcEEEEEEcCCC-CCCcC---chHHHHHHHHhcCCEEEEeecCCC
Q 026555 13 EEFILNSRRVKLFTCSWIPQNQEPKALIFICHGYA-MECSI---GMNSTAIRLANEGYACYGIDYQGH 76 (237)
Q Consensus 13 ~~~~~~~~g~~l~~~~~~~~~~~~~~~iv~~hG~~-~~~~~---~~~~~~~~l~~~g~~v~~~d~~g~ 76 (237)
...+.+.+|..+....+ ..+++||...... ..+.. .+..+.+.+.+.|+.|+.+....+
T Consensus 11 df~l~d~~G~~v~l~~~-----~gk~vlv~f~a~~C~~c~~e~~~l~~l~~~~~~~g~~vvgv~~~~~ 73 (167)
T PLN02412 11 DFTVKDIGGNDVSLNQY-----KGKVLLIVNVASKCGLTDSNYKELNVLYEKYKEQGFEILAFPCNQF 73 (167)
T ss_pred ceEEECCCCCEEeHHHh-----CCCEEEEEEeCCCCCChHHHHHHHHHHHHHHhhCCcEEEEeccccc
Confidence 34556678876654433 2355666554322 22221 124567777778899998876543
No 373
>PF13671 AAA_33: AAA domain; PDB: 1LTQ_A 2IA5_K 1RC8_A 1LY1_A 1RRC_A 1RPZ_A 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B ....
Probab=26.72 E-value=1.5e+02 Score=19.93 Aligned_cols=31 Identities=26% Similarity=0.200 Sum_probs=21.4
Q ss_pred EEEEcCCCCCCcCchHHHHHHHHh-cCCEEEEeec
Q 026555 40 IFICHGYAMECSIGMNSTAIRLAN-EGYACYGIDY 73 (237)
Q Consensus 40 iv~~hG~~~~~~~~~~~~~~~l~~-~g~~v~~~d~ 73 (237)
||++=|.++++. ..+++.+.+ .|+.++..|-
T Consensus 1 lii~~G~pgsGK---St~a~~l~~~~~~~~i~~D~ 32 (143)
T PF13671_consen 1 LIILCGPPGSGK---STLAKRLAKRLGAVVISQDE 32 (143)
T ss_dssp EEEEEESTTSSH---HHHHHHHHHHSTEEEEEHHH
T ss_pred CEEEECCCCCCH---HHHHHHHHHHCCCEEEeHHH
Confidence 566777777777 567777764 4777777664
No 374
>TIGR03127 RuMP_HxlB 6-phospho 3-hexuloisomerase. Members of this protein family are 6-phospho 3-hexuloisomerase (PHI), or the PHI domain of a fusion protein. This enzyme is part of the ribulose monophosphate (RuMP) pathway, which in one direction removes the toxic metabolite formaldehyde by assimilation into fructose-6-phosphate. In the other direction, in species lacking a complete pentose phosphate pathway, the RuMP pathway yields ribulose-5-phosphate, necessary for nucleotide biosynthesis, at the cost of also yielding formaldehyde. These latter species tend usually have a formaldehyde-activating enzyme to attach formaldehyde to the C1 carrier tetrahydromethanopterin.
Probab=26.62 E-value=2.3e+02 Score=20.34 Aligned_cols=32 Identities=22% Similarity=0.396 Sum_probs=21.7
Q ss_pred EEEEcCCCCCCcCchHHHHHHHHhcCCEEEEee
Q 026555 40 IFICHGYAMECSIGMNSTAIRLANEGYACYGID 72 (237)
Q Consensus 40 iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d 72 (237)
-|++.|.|.+...- ..+...|...|..+...+
T Consensus 32 ~I~i~G~G~S~~~A-~~~~~~l~~~g~~~~~~~ 63 (179)
T TIGR03127 32 RIFVAGAGRSGLVG-KAFAMRLMHLGFNVYVVG 63 (179)
T ss_pred EEEEEecCHHHHHH-HHHHHHHHhCCCeEEEeC
Confidence 47777777665433 567777777788777663
No 375
>cd07229 Pat_TGL3_like Triacylglycerol lipase 3. Triacylglycerol lipase 3 (TGL3) are responsible for all the TAG lipase activity of the lipid particle. Triacylglycerol (TAG) lipases are also necessary for the mobilization of TAG stored in lipid particles. TGL3 contains the consensus sequence motif GXSXG, which is found in lipolytic enzymes. This family includes Tgl3p from Saccharomyces cerevisiae.
Probab=26.44 E-value=60 Score=27.08 Aligned_cols=30 Identities=13% Similarity=0.122 Sum_probs=23.2
Q ss_pred CCceEEEEEeccchHHHHHHHhcCCCcccE
Q 026555 110 KEKMRYLLGESMGGAMVLLLHRKKPDYFDG 139 (237)
Q Consensus 110 ~~~~~~l~G~S~Gg~~a~~~a~~~p~~~~~ 139 (237)
+..+-++.|-|.|+.+|..++...++.+..
T Consensus 109 gl~p~~i~GtS~Gaivaa~~a~~~~~e~~~ 138 (391)
T cd07229 109 GLLPRIITGTATGALIAALVGVHTDEELLR 138 (391)
T ss_pred CCCCceEEEecHHHHHHHHHHcCCHHHHHH
Confidence 566778999999999999999865544333
No 376
>cd02022 DPCK Dephospho-coenzyme A kinase (DPCK, EC 2.7.1.24) catalyzes the phosphorylation of dephosphocoenzyme A (dCoA) to yield CoA, which is the final step in CoA biosynthesis.
Probab=26.22 E-value=85 Score=22.64 Aligned_cols=34 Identities=21% Similarity=0.095 Sum_probs=24.4
Q ss_pred EEEEcCCCCCCcCchHHHHHHHHhcCCEEEEeecCCC
Q 026555 40 IFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGH 76 (237)
Q Consensus 40 iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~ 76 (237)
+|.+-|..+++. ..++..|.+.|+.++..|--.+
T Consensus 1 ii~itG~~gsGK---st~~~~l~~~g~~~i~~D~~~~ 34 (179)
T cd02022 1 IIGLTGGIGSGK---STVAKLLKELGIPVIDADKIAH 34 (179)
T ss_pred CEEEECCCCCCH---HHHHHHHHHCCCCEEecCHHHH
Confidence 356667777666 5677888878999888886543
No 377
>cd07208 Pat_hypo_Ecoli_yjju_like Hypothetical patatin similar to yjju protein of Escherichia coli. Patatin-like phospholipase similar to yjju protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins, and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=26.04 E-value=1e+02 Score=23.96 Aligned_cols=23 Identities=13% Similarity=0.148 Sum_probs=18.9
Q ss_pred eEEEEEeccchHHHHHHHhcCCC
Q 026555 113 MRYLLGESMGGAMVLLLHRKKPD 135 (237)
Q Consensus 113 ~~~l~G~S~Gg~~a~~~a~~~p~ 135 (237)
.=.+.|-|.|+.++..++...+.
T Consensus 28 fd~i~GtSaGAi~a~~~~~g~~~ 50 (266)
T cd07208 28 FDLVIGVSAGALNAASYLSGQRG 50 (266)
T ss_pred CCEEEEECHHHHhHHHHHhCCcc
Confidence 44899999999999998876543
No 378
>PRK07933 thymidylate kinase; Validated
Probab=25.95 E-value=1.7e+02 Score=21.95 Aligned_cols=40 Identities=13% Similarity=0.134 Sum_probs=29.0
Q ss_pred EEEEcCCCCCCcC-chHHHHHHHHhcCCEEEEeecCCCCCC
Q 026555 40 IFICHGYAMECSI-GMNSTAIRLANEGYACYGIDYQGHGKS 79 (237)
Q Consensus 40 iv~~hG~~~~~~~-~~~~~~~~l~~~g~~v~~~d~~g~G~s 79 (237)
+|.+-|..+++.. ....+.+.|.+.|+.|+....|.+|.+
T Consensus 2 ~IviEG~dGsGKST~~~~L~~~L~~~g~~v~~~~~P~~~~~ 42 (213)
T PRK07933 2 LIAIEGVDGAGKRTLTEALRAALEARGRSVATLAFPRYGRS 42 (213)
T ss_pred EEEEEcCCCCCHHHHHHHHHHHHHHCCCeEEEEecCCCCCC
Confidence 4556676666653 235778888888999999999977644
No 379
>KOG0743 consensus AAA+-type ATPase [Posttranslational modification, protein turnover, chaperones]
Probab=25.90 E-value=2.2e+02 Score=24.35 Aligned_cols=22 Identities=23% Similarity=0.341 Sum_probs=11.7
Q ss_pred HHHHHHHHhc-CCEEEEeecCCC
Q 026555 55 NSTAIRLANE-GYACYGIDYQGH 76 (237)
Q Consensus 55 ~~~~~~l~~~-g~~v~~~d~~g~ 76 (237)
.++..++++. +|.|+-.++-..
T Consensus 249 SS~IaAmAn~L~ydIydLeLt~v 271 (457)
T KOG0743|consen 249 SSFIAAMANYLNYDIYDLELTEV 271 (457)
T ss_pred HHHHHHHHhhcCCceEEeeeccc
Confidence 4445555443 566666666433
No 380
>KOG2585 consensus Uncharacterized conserved protein [Function unknown]
Probab=25.84 E-value=1.5e+02 Score=25.11 Aligned_cols=38 Identities=21% Similarity=0.075 Sum_probs=28.5
Q ss_pred CCcEEEEEEcCCCCCCcCchHHHHHHHHhcCCEEEEeec
Q 026555 35 EPKALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDY 73 (237)
Q Consensus 35 ~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~ 73 (237)
..+|.|++|=|-+.+...- .-.++.|+..||.++++-.
T Consensus 264 ~~~P~V~Ilcgpgnnggdg-~v~gRHL~~~G~~~vi~~p 301 (453)
T KOG2585|consen 264 HQWPLVAILCGPGNNGGDG-LVCGRHLAQHGYTPVIYYP 301 (453)
T ss_pred CCCceEEEEeCCCCccchh-HHHHHHHHHcCceeEEEee
Confidence 4567788888877777755 4578999999998766543
No 381
>PRK00889 adenylylsulfate kinase; Provisional
Probab=25.61 E-value=1.4e+02 Score=21.31 Aligned_cols=36 Identities=17% Similarity=0.196 Sum_probs=24.6
Q ss_pred EEEEEEcCCCCCCcCch-HHHHHHHHhcCCEEEEeec
Q 026555 38 ALIFICHGYAMECSIGM-NSTAIRLANEGYACYGIDY 73 (237)
Q Consensus 38 ~~iv~~hG~~~~~~~~~-~~~~~~l~~~g~~v~~~d~ 73 (237)
+.++++.|..++....+ ..++..+...|..+..+|.
T Consensus 4 g~~i~~~G~~GsGKST~a~~la~~l~~~g~~v~~id~ 40 (175)
T PRK00889 4 GVTVWFTGLSGAGKTTIARALAEKLREAGYPVEVLDG 40 (175)
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHHHHcCCeEEEEcC
Confidence 44888889988887432 3566666666777777754
No 382
>PRK13947 shikimate kinase; Provisional
Probab=25.46 E-value=91 Score=22.04 Aligned_cols=30 Identities=13% Similarity=0.248 Sum_probs=22.7
Q ss_pred EEEcCCCCCCcCchHHHHHHHHhc-CCEEEEeec
Q 026555 41 FICHGYAMECSIGMNSTAIRLANE-GYACYGIDY 73 (237)
Q Consensus 41 v~~hG~~~~~~~~~~~~~~~l~~~-g~~v~~~d~ 73 (237)
|++.|++++.. ..++..|++. |+.++..|.
T Consensus 4 I~l~G~~GsGK---st~a~~La~~lg~~~id~d~ 34 (171)
T PRK13947 4 IVLIGFMGTGK---TTVGKRVATTLSFGFIDTDK 34 (171)
T ss_pred EEEEcCCCCCH---HHHHHHHHHHhCCCEEECch
Confidence 67888888877 6677777764 888877775
No 383
>PRK09072 short chain dehydrogenase; Provisional
Probab=25.41 E-value=1.2e+02 Score=23.21 Aligned_cols=32 Identities=16% Similarity=0.053 Sum_probs=23.1
Q ss_pred EEEEcCCCCCCcCchHHHHHHHHhcCCEEEEeecC
Q 026555 40 IFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQ 74 (237)
Q Consensus 40 iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 74 (237)
.+++.|..+... ..+++.|.++|+.|++.+..
T Consensus 7 ~vlItG~s~~iG---~~ia~~l~~~G~~V~~~~r~ 38 (263)
T PRK09072 7 RVLLTGASGGIG---QALAEALAAAGARLLLVGRN 38 (263)
T ss_pred EEEEECCCchHH---HHHHHHHHHCCCEEEEEECC
Confidence 456666444333 68899999999999998754
No 384
>COG1255 Uncharacterized protein conserved in archaea [Function unknown]
Probab=25.19 E-value=92 Score=21.03 Aligned_cols=22 Identities=27% Similarity=0.344 Sum_probs=19.0
Q ss_pred chHHHHHHHHhcCCEEEEeecC
Q 026555 53 GMNSTAIRLANEGYACYGIDYQ 74 (237)
Q Consensus 53 ~~~~~~~~l~~~g~~v~~~d~~ 74 (237)
++..+++.|+++|+.|++.|--
T Consensus 24 ~~~~VA~~L~e~g~dv~atDI~ 45 (129)
T COG1255 24 FFLDVAKRLAERGFDVLATDIN 45 (129)
T ss_pred hHHHHHHHHHHcCCcEEEEecc
Confidence 3378999999999999999964
No 385
>KOG2805 consensus tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase [Translation, ribosomal structure and biogenesis]
Probab=25.17 E-value=3.8e+02 Score=21.85 Aligned_cols=36 Identities=25% Similarity=0.346 Sum_probs=22.9
Q ss_pred CCcEEEEEEcCCCCCCcCchHHH-HHHHHhcCCEEEEeecCCC
Q 026555 35 EPKALIFICHGYAMECSIGMNST-AIRLANEGYACYGIDYQGH 76 (237)
Q Consensus 35 ~~~~~iv~~hG~~~~~~~~~~~~-~~~l~~~g~~v~~~d~~g~ 76 (237)
....++|.+-|.-. +++ +..|++.||.|..+-++.+
T Consensus 4 ~~~~VvvamSgGVD------SsVaa~Ll~~~g~~v~gv~M~nW 40 (377)
T KOG2805|consen 4 KPDRVVVAMSGGVD------SSVAARLLAARGYNVTGVFMKNW 40 (377)
T ss_pred ccceEEEEecCCch------HHHHHHHHHhcCCCeeEEeeecc
Confidence 34456666666332 233 4566778999988877776
No 386
>COG4943 Predicted signal transduction protein containing sensor and EAL domains [Signal transduction mechanisms]
Probab=25.14 E-value=76 Score=27.23 Aligned_cols=25 Identities=32% Similarity=0.489 Sum_probs=22.3
Q ss_pred HHHHHHHHhcCCEEEEeecCCCCCCC
Q 026555 55 NSTAIRLANEGYACYGIDYQGHGKSA 80 (237)
Q Consensus 55 ~~~~~~l~~~g~~v~~~d~~g~G~s~ 80 (237)
.+...++.+.||+|++-|+ |.|.|.
T Consensus 404 ~~iI~r~ReaG~~IyIDDF-GTGYSn 428 (524)
T COG4943 404 TPIILRLREAGHEIYIDDF-GTGYSN 428 (524)
T ss_pred hHHHHHHHhcCCeEEEccC-cCcchh
Confidence 5788999999999999888 999887
No 387
>PF03490 Varsurf_PPLC: Variant-surface-glycoprotein phospholipase C; InterPro: IPR003633 Variant-surface-glycoprotein phospholipase C, by hydrolysis of the attached glycolipid, releases soluble variant surface glycoprotein containing phosphoinositol from the cell wall after lysis. It catalyses the conversion of variant-surface-glycoprotein 1,2 didecanoyl-SN-phosphatidylinositol and water to 1,2-didecanoylglycerol and the soluble variant-surface-glycoprotein. It also cleaves similar membrane anchors on some mammalian proteins.; GO: 0047396 glycosylphosphatidylinositol diacylglycerol-lyase activity, 0006650 glycerophospholipid metabolic process
Probab=25.07 E-value=79 Score=17.57 Aligned_cols=27 Identities=7% Similarity=0.058 Sum_probs=21.4
Q ss_pred CChhhHHHHHHHHHHHHHhhhhcCCceEEEEEe
Q 026555 87 DNFDDLVDDCFNHFTSICEKEENKEKMRYLLGE 119 (237)
Q Consensus 87 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~G~ 119 (237)
...+.+..|+...|..+ .+.++.+.|-
T Consensus 6 w~PqSWM~DLrS~I~~~------~I~ql~ipGs 32 (51)
T PF03490_consen 6 WHPQSWMSDLRSSIGEM------AITQLFIPGS 32 (51)
T ss_pred cCcHHHHHHHHHHHhcc------eeeeEEeccc
Confidence 45678899999999887 6788888774
No 388
>COG4850 Uncharacterized conserved protein [Function unknown]
Probab=24.90 E-value=2.7e+02 Score=22.78 Aligned_cols=37 Identities=16% Similarity=0.133 Sum_probs=29.0
Q ss_pred CCceEEEEEeccch--HHHHHHHhcCCCcccEEEEcCCc
Q 026555 110 KEKMRYLLGESMGG--AMVLLLHRKKPDYFDGAVLVAPM 146 (237)
Q Consensus 110 ~~~~~~l~G~S~Gg--~~a~~~a~~~p~~~~~~vl~~~~ 146 (237)
...+++++|-|-== -+-.+.+.++|++|.++.+-+..
T Consensus 276 p~~kfvLVGDsGE~DpeIYae~v~~fP~RIl~I~IRdvs 314 (373)
T COG4850 276 PDRKFVLVGDSGEHDPEIYAEMVRCFPNRILGIYIRDVS 314 (373)
T ss_pred CCceEEEecCCCCcCHHHHHHHHHhCccceeeEeeeecc
Confidence 78899999998443 45567778999999998886544
No 389
>cd07217 Pat17_PNPLA8_PNPLA9_like4 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=24.85 E-value=64 Score=26.39 Aligned_cols=18 Identities=17% Similarity=0.287 Sum_probs=15.9
Q ss_pred EEEEeccchHHHHHHHhc
Q 026555 115 YLLGESMGGAMVLLLHRK 132 (237)
Q Consensus 115 ~l~G~S~Gg~~a~~~a~~ 132 (237)
.+.|.|.||.+|+.++..
T Consensus 44 lIaGTStGgIIAa~la~g 61 (344)
T cd07217 44 FVGGTSTGSIIAACIALG 61 (344)
T ss_pred EEEEecHHHHHHHHHHcC
Confidence 699999999999998864
No 390
>COG1709 Predicted transcriptional regulator [Transcription]
Probab=24.79 E-value=1.2e+02 Score=22.96 Aligned_cols=33 Identities=18% Similarity=0.168 Sum_probs=23.8
Q ss_pred CCcEEEEEEcCCCCCCcCchHHHHHHHHhc-CCEEEE
Q 026555 35 EPKALIFICHGYAMECSIGMNSTAIRLANE-GYACYG 70 (237)
Q Consensus 35 ~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~-g~~v~~ 70 (237)
+.+|.+|++||.....- ++++-.+++. |...++
T Consensus 192 ~lKP~aVVlHGi~~~~v---D~lAikiAe~e~IpLvv 225 (241)
T COG1709 192 PLKPAAVVLHGIPPDNV---DELAIKIAEIERIPLVV 225 (241)
T ss_pred CCCccEEEEecCCccch---hHHHHHHHhhcCCceEE
Confidence 44788999999887643 6888888875 444443
No 391
>PRK06731 flhF flagellar biosynthesis regulator FlhF; Validated
Probab=24.53 E-value=3.5e+02 Score=21.29 Aligned_cols=63 Identities=16% Similarity=0.162 Sum_probs=39.4
Q ss_pred CCEEEEeecCCCCCCCCCCCCcCChhhHHHHHHHHHHHHHhhhhcCCceEE-EEEeccchHHHHHHHhcCC-CcccEEEE
Q 026555 65 GYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEKEENKEKMRY-LLGESMGGAMVLLLHRKKP-DYFDGAVL 142 (237)
Q Consensus 65 g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~-l~G~S~Gg~~a~~~a~~~p-~~~~~~vl 142 (237)
++.++.+|-+|.... -...++.+.++++.. ....++ ++.-++++.-+...+.++. -.+.++|+
T Consensus 154 ~~D~ViIDt~Gr~~~---------~~~~l~el~~~~~~~------~~~~~~LVl~a~~~~~d~~~~~~~f~~~~~~~~I~ 218 (270)
T PRK06731 154 RVDYILIDTAGKNYR---------ASETVEEMIETMGQV------EPDYICLTLSASMKSKDMIEIITNFKDIHIDGIVF 218 (270)
T ss_pred CCCEEEEECCCCCcC---------CHHHHHHHHHHHhhh------CCCeEEEEEcCccCHHHHHHHHHHhCCCCCCEEEE
Confidence 588888888876432 134455666665544 333444 4545678878877777753 44777777
No 392
>PF13383 Methyltransf_22: Methyltransferase domain
Probab=24.29 E-value=1.4e+02 Score=23.09 Aligned_cols=39 Identities=13% Similarity=0.219 Sum_probs=30.7
Q ss_pred CcEEEEEEcCCCCCCcCchHHHHHHHHhcCCEEEEeecCC
Q 026555 36 PKALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQG 75 (237)
Q Consensus 36 ~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g 75 (237)
....+|=+|+.+.....+ ..+.+.|.+.||+.+..+.-.
T Consensus 191 ~~Qi~iEiH~~~~~~~~~-~~~l~~l~~~gfr~F~~e~N~ 229 (242)
T PF13383_consen 191 VCQILIEIHGWPSEHREW-YKLLQELEKAGFRLFNVEPNP 229 (242)
T ss_pred CcEEEEEEEeCccchhHH-HHHHHHHHHCCcEEEEecCCh
Confidence 378899999977665545 578899999999998877544
No 393
>PRK08177 short chain dehydrogenase; Provisional
Probab=24.29 E-value=1.4e+02 Score=22.10 Aligned_cols=21 Identities=14% Similarity=0.041 Sum_probs=18.0
Q ss_pred HHHHHHHHhcCCEEEEeecCC
Q 026555 55 NSTAIRLANEGYACYGIDYQG 75 (237)
Q Consensus 55 ~~~~~~l~~~g~~v~~~d~~g 75 (237)
..+++.|.++|++|++.+...
T Consensus 15 ~~la~~l~~~G~~V~~~~r~~ 35 (225)
T PRK08177 15 LGLVDRLLERGWQVTATVRGP 35 (225)
T ss_pred HHHHHHHHhCCCEEEEEeCCC
Confidence 678899999999999988754
No 394
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=24.16 E-value=1.3e+02 Score=22.92 Aligned_cols=32 Identities=16% Similarity=0.013 Sum_probs=22.3
Q ss_pred EEEEcCCCCCCcCchHHHHHHHHhcCCEEEEeecC
Q 026555 40 IFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQ 74 (237)
Q Consensus 40 iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 74 (237)
.+++-|..+... ..+++.|.++|++|+..+..
T Consensus 12 ~vlItGa~g~iG---~~ia~~l~~~G~~V~~~~r~ 43 (255)
T PRK07523 12 RALVTGSSQGIG---YALAEGLAQAGAEVILNGRD 43 (255)
T ss_pred EEEEECCcchHH---HHHHHHHHHcCCEEEEEeCC
Confidence 455555443333 67889999999999987753
No 395
>cd07211 Pat_PNPLA8 Patatin-like phospholipase domain containing protein 8. PNPLA8 is a Ca-independent myocardial phospholipase which maintains mitochondrial integrity. PNPLA8 is also known as iPLA2-gamma. In humans, it is predominantly expressed in heart tissue. iPLA2-gamma can catalyze both phospholipase A1 and A2 reactions (PLA1 and PLA2 respectively). This family includes PNPLA8 (iPLA2-gamma) from Homo sapiens and iPLA2-2 from Mus musculus.
Probab=24.14 E-value=61 Score=25.88 Aligned_cols=17 Identities=35% Similarity=0.608 Sum_probs=15.3
Q ss_pred EEEEeccchHHHHHHHh
Q 026555 115 YLLGESMGGAMVLLLHR 131 (237)
Q Consensus 115 ~l~G~S~Gg~~a~~~a~ 131 (237)
.+.|-|.||.+|+.++.
T Consensus 44 li~GTStGgiiA~~la~ 60 (308)
T cd07211 44 YICGVSTGAILAFLLGL 60 (308)
T ss_pred EEEecChhHHHHHHHhc
Confidence 48999999999999875
No 396
>PRK13230 nitrogenase reductase-like protein; Reviewed
Probab=23.60 E-value=1.8e+02 Score=22.74 Aligned_cols=41 Identities=12% Similarity=0.054 Sum_probs=28.9
Q ss_pred EEEEEcCCCCCCcCc-hHHHHHHHHhcCCEEEEeecCCCCCCC
Q 026555 39 LIFICHGYAMECSIG-MNSTAIRLANEGYACYGIDYQGHGKSA 80 (237)
Q Consensus 39 ~iv~~hG~~~~~~~~-~~~~~~~l~~~g~~v~~~d~~g~G~s~ 80 (237)
+|.++ |=|+.+... ...++..|++.|++|+.+|.--+|.+.
T Consensus 3 ~i~~~-gKGGVGKTT~a~nLA~~La~~G~rVLliD~Dpq~n~t 44 (279)
T PRK13230 3 KFCFY-GKGGIGKSTTVCNIAAALAESGKKVLVVGCDPKADCT 44 (279)
T ss_pred EEEEE-CCCCCcHHHHHHHHHHHHHhCCCEEEEEeeCCccccc
Confidence 35556 555555533 257889999999999999987666544
No 397
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=23.53 E-value=1.6e+02 Score=23.58 Aligned_cols=37 Identities=22% Similarity=0.375 Sum_probs=26.2
Q ss_pred HHHHHHHHHHHhhhhcCCceEEEEEec--cchHHHHHHHhc
Q 026555 94 DDCFNHFTSICEKEENKEKMRYLLGES--MGGAMVLLLHRK 132 (237)
Q Consensus 94 ~d~~~~~~~~~~~~~~~~~~~~l~G~S--~Gg~~a~~~a~~ 132 (237)
.-+.+++++. .-....+++.++|-| ||..++.++...
T Consensus 144 ~aii~lL~~~--~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~ 182 (301)
T PRK14194 144 SGCLRLLEDT--CGDLTGKHAVVIGRSNIVGKPMAALLLQA 182 (301)
T ss_pred HHHHHHHHHh--CCCCCCCEEEEECCCCccHHHHHHHHHHC
Confidence 3444555544 333457899999997 999999998864
No 398
>TIGR03708 poly_P_AMP_trns polyphosphate:AMP phosphotransferase. Members of this protein family contain a domain duplication. The characterized member from Acinetobacter johnsonii is polyphosphate:AMP phosphotransferase (PAP), which can transfer the terminal phosphate from poly(P) to AMP, yielding ADP. In the opposite direction, this enzyme can synthesize poly(P). Each domain of this protein family is homologous to polyphosphate kinase, an enzyme that can run in the forward direction to extend a polyphosphate chain with a new terminal phosphate from ATP, or in reverse to make ATP (or GTP) from ADP (or GDP).
Probab=23.45 E-value=1.3e+02 Score=26.11 Aligned_cols=41 Identities=10% Similarity=0.063 Sum_probs=31.8
Q ss_pred CCcEEEEEEcCCCCCCcCc-hHHHHHHHHhcCCEEEEeecCC
Q 026555 35 EPKALIFICHGYAMECSIG-MNSTAIRLANEGYACYGIDYQG 75 (237)
Q Consensus 35 ~~~~~iv~~hG~~~~~~~~-~~~~~~~l~~~g~~v~~~d~~g 75 (237)
...|+||++.|+.+++... +..+...|...|++|.++..|.
T Consensus 37 ~~~~vlIv~eG~DaaGKg~~I~~l~~~ldprg~~v~~~~~P~ 78 (493)
T TIGR03708 37 AGFPVIILIEGWDGAGKGETINLLNEWMDPRGIETHAFGRPS 78 (493)
T ss_pred cCCeEEEEEeCCCCCChHHHHHHHHHHhCcCccEEEeCCCCC
Confidence 3478999999998887733 3567778877899999887764
No 399
>COG3910 Predicted ATPase [General function prediction only]
Probab=23.30 E-value=2.4e+02 Score=21.22 Aligned_cols=50 Identities=12% Similarity=0.139 Sum_probs=27.1
Q ss_pred HHHHHHHHhcCCEEEEeecCCCCCCCCCCCCcCChhhHHHHHHHHHHHHHhhhhcCCceEEEEEec
Q 026555 55 NSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEKEENKEKMRYLLGES 120 (237)
Q Consensus 55 ~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S 120 (237)
.-+.++|...| ++..|=|--+.|.. .++ .+.+.++.+.+ ...++++.-||
T Consensus 138 ~i~~~rf~~~G--iYiLDEPEa~LSp~---------RQl-ella~l~~la~----sGaQ~IiATHS 187 (233)
T COG3910 138 AIFHNRFNGQG--IYILDEPEAALSPS---------RQL-ELLAILRDLAD----SGAQIIIATHS 187 (233)
T ss_pred HHHHHHhccCc--eEEecCccccCCHH---------HHH-HHHHHHHHHHh----cCCeEEEEecC
Confidence 34445554443 56666665555542 111 34444555532 45899999987
No 400
>cd07213 Pat17_PNPLA8_PNPLA9_like1 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=23.24 E-value=71 Score=25.26 Aligned_cols=19 Identities=26% Similarity=0.258 Sum_probs=16.7
Q ss_pred EEEEeccchHHHHHHHhcC
Q 026555 115 YLLGESMGGAMVLLLHRKK 133 (237)
Q Consensus 115 ~l~G~S~Gg~~a~~~a~~~ 133 (237)
.+.|-|.||.+|+.++...
T Consensus 37 ~i~GTSaGaiia~~la~g~ 55 (288)
T cd07213 37 LFAGTSAGSLIALGLALGY 55 (288)
T ss_pred EEEEeCHHHHHHHHHHcCc
Confidence 6999999999999988653
No 401
>TIGR00174 miaA tRNA isopentenyltransferase (miaA). Catalyzes the first step in the modification of an adenosine near the anticodon to 2-methylthio-N6-isopentyladenosine.
Probab=23.01 E-value=2.8e+02 Score=22.08 Aligned_cols=72 Identities=19% Similarity=0.213 Sum_probs=37.9
Q ss_pred EEEcCCCCCCcCchHHHHHHHHhc-CCEEEEeecC----C--CCCCCC----------------CCCCcCChhhHHHHHH
Q 026555 41 FICHGYAMECSIGMNSTAIRLANE-GYACYGIDYQ----G--HGKSAG----------------LSGYIDNFDDLVDDCF 97 (237)
Q Consensus 41 v~~hG~~~~~~~~~~~~~~~l~~~-g~~v~~~d~~----g--~G~s~~----------------~~~~~~~~~~~~~d~~ 97 (237)
+++=|-.+++. ..++..|++. +..++..|-. | .|.... .....++..++..+..
T Consensus 2 i~i~G~t~~GK---s~la~~l~~~~~~~iis~Ds~qvY~~l~IgTakp~~~e~~~v~hhlid~~~~~~~~~v~~f~~~a~ 78 (287)
T TIGR00174 2 IFIMGPTAVGK---SQLAIQLAKKLNAEIISVDSMQIYKGMDIGTAKPSLQEREGIPHHLIDILDPSESYSAADFQTLAL 78 (287)
T ss_pred EEEECCCCCCH---HHHHHHHHHhCCCcEEEechhheeeeccccCCCCCHHHHcCccEEEEEEechhheEcHHHHHHHHH
Confidence 44555555544 5666677665 5677877742 1 121110 1112245577777777
Q ss_pred HHHHHHHhhhhcCCceEEEEEe
Q 026555 98 NHFTSICEKEENKEKMRYLLGE 119 (237)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~l~G~ 119 (237)
+.++.+.. ..+..+++|-
T Consensus 79 ~~i~~~~~----~g~~pi~vGG 96 (287)
T TIGR00174 79 NAIADITA----RGKIPLLVGG 96 (287)
T ss_pred HHHHHHHh----CCCCEEEEcC
Confidence 88777632 2334455553
No 402
>COG0426 FpaA Uncharacterized flavoproteins [Energy production and conversion]
Probab=22.95 E-value=2.4e+02 Score=23.60 Aligned_cols=74 Identities=15% Similarity=0.131 Sum_probs=45.0
Q ss_pred EEEEEcCCCCCCcCchHHHHHHHHhcCCEEEEeecCCCCCCCCCCCCcCChhhHHHHHHHHHHHHHhhhhcCCceEEEEE
Q 026555 39 LIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEKEENKEKMRYLLG 118 (237)
Q Consensus 39 ~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~G 118 (237)
.|+..--++.+..+- ..+++.+.+.|..|..+++.- . |..++++.+ ...+.+++|
T Consensus 250 ~l~Y~smyg~T~~ma-~aiaegl~~~gv~v~~~~~~~--------------~----~~~eI~~~i------~~a~~~vvG 304 (388)
T COG0426 250 DLIYDSMYGNTEKMA-QAIAEGLMKEGVDVEVINLED--------------A----DPSEIVEEI------LDAKGLVVG 304 (388)
T ss_pred EEEEecccCCHHHHH-HHHHHHhhhcCCceEEEEccc--------------C----CHHHHHHHH------hhcceEEEe
Confidence 344444455544433 778888888888888888631 1 344444444 456788888
Q ss_pred ec---------cchHHHHHHHhcCCCcc
Q 026555 119 ES---------MGGAMVLLLHRKKPDYF 137 (237)
Q Consensus 119 ~S---------~Gg~~a~~~a~~~p~~~ 137 (237)
-+ ++..+....+...+++.
T Consensus 305 sPT~~~~~~p~i~~~l~~v~~~~~~~k~ 332 (388)
T COG0426 305 SPTINGGAHPPIQTALGYVLALAPKNKL 332 (388)
T ss_pred cCcccCCCCchHHHHHHHHHhccCcCce
Confidence 88 45555555555555554
No 403
>PRK12824 acetoacetyl-CoA reductase; Provisional
Probab=22.90 E-value=1.4e+02 Score=22.28 Aligned_cols=32 Identities=22% Similarity=0.331 Sum_probs=23.6
Q ss_pred EEEEcCCCCCCcCchHHHHHHHHhcCCEEEEeecC
Q 026555 40 IFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQ 74 (237)
Q Consensus 40 iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 74 (237)
.+++.|..+... ..+++.|.++|++|+..+..
T Consensus 4 ~vlItG~s~~iG---~~la~~l~~~g~~vi~~~r~ 35 (245)
T PRK12824 4 IALVTGAKRGIG---SAIARELLNDGYRVIATYFS 35 (245)
T ss_pred EEEEeCCCchHH---HHHHHHHHHcCCEEEEEeCC
Confidence 466666444333 68899999999999998765
No 404
>PRK06953 short chain dehydrogenase; Provisional
Probab=22.90 E-value=1.7e+02 Score=21.69 Aligned_cols=31 Identities=6% Similarity=0.104 Sum_probs=22.3
Q ss_pred EEEcCCCCCCcCchHHHHHHHHhcCCEEEEeecC
Q 026555 41 FICHGYAMECSIGMNSTAIRLANEGYACYGIDYQ 74 (237)
Q Consensus 41 v~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 74 (237)
+++.|..+... ..+++.|.+.|++|+..+..
T Consensus 4 vlvtG~sg~iG---~~la~~L~~~G~~v~~~~r~ 34 (222)
T PRK06953 4 VLIVGASRGIG---REFVRQYRADGWRVIATARD 34 (222)
T ss_pred EEEEcCCCchh---HHHHHHHHhCCCEEEEEECC
Confidence 45666544333 67889998999999998754
No 405
>PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 9 GT9 from CAZY comprises enzymes with two known activity; lipopolysaccharide N-acetylglucosaminyltransferase (2.4.1.56 from EC), heptosyltransferase (2.4 from EC). Heptosyltransferase I is thought to add L-glycero-D-manno-heptose to the inner 3-deoxy-D-manno-octulosonic acid (Kdo) residue of the lipopolysaccharide core []. Heptosyltransferase II is a glycosyltransferase involved in the synthesis of the inner core region of lipopolysaccharide []. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. These enzymes transfer heptose to the lipopolysaccharide core [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0008152 metabolic process; PDB: 1PSW_A 2H1F_A 2GT1_A 3TOV_A 2H1H_A.
Probab=22.89 E-value=1.2e+02 Score=23.04 Aligned_cols=37 Identities=22% Similarity=0.141 Sum_probs=21.7
Q ss_pred CcEEEEEEcCCCCCCcCc----hHHHHHHHHhcCCEEEEee
Q 026555 36 PKALIFICHGYAMECSIG----MNSTAIRLANEGYACYGID 72 (237)
Q Consensus 36 ~~~~iv~~hG~~~~~~~~----~~~~~~~l~~~g~~v~~~d 72 (237)
.++.|++.+|.+.....| |..+++.|.+.++.|+..-
T Consensus 104 ~~~~i~i~~~a~~~~k~wp~e~~~~l~~~l~~~~~~vvl~g 144 (247)
T PF01075_consen 104 DKPYIGINPGASWPSKRWPAEKWAELIERLKERGYRVVLLG 144 (247)
T ss_dssp TSSEEEEE---SSGGGS--HHHHHHHHHHHCCCT-EEEE--
T ss_pred cCCeEEEeecCCCccccCCHHHHHHHHHHHHhhCceEEEEc
Confidence 467888888887766654 3677888888877776543
No 406
>cd07218 Pat_iPLA2 Calcium-independent phospholipase A2; Classified as Group IVA-1 PLA2. Calcium-independent phospholipase A2; otherwise known as Group IVA-1 PLA2. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly);mutagenesis experiments confirm the role of this serine as a nucleophile. Some members of this group show triacylglycerol lipase activity (EC 3:1:1:3). Members include iPLA-1, iPLA-2, and iPLA-3 from Aedes aegypti and show acylglycerol transacylase/lipase activity. Also includes putative iPLA2-eta from Pediculus humanus corporis which shows patatin-like phospholipase activity.
Probab=22.72 E-value=1.4e+02 Score=23.04 Aligned_cols=20 Identities=25% Similarity=0.250 Sum_probs=17.2
Q ss_pred EEEEeccchHHHHHHHhcCC
Q 026555 115 YLLGESMGGAMVLLLHRKKP 134 (237)
Q Consensus 115 ~l~G~S~Gg~~a~~~a~~~p 134 (237)
.+.|-|.|+.++..++...+
T Consensus 33 ~i~GtSAGAl~aa~~a~g~~ 52 (245)
T cd07218 33 KISGASAGALAACCLLCDLP 52 (245)
T ss_pred eEEEEcHHHHHHHHHHhCCc
Confidence 49999999999999987654
No 407
>COG4475 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=22.58 E-value=1.8e+02 Score=20.70 Aligned_cols=29 Identities=24% Similarity=0.323 Sum_probs=22.1
Q ss_pred HHHHHHHHHHHHHhhhhcCCceEEEEEec
Q 026555 92 LVDDCFNHFTSICEKEENKEKMRYLLGES 120 (237)
Q Consensus 92 ~~~d~~~~~~~~~~~~~~~~~~~~l~G~S 120 (237)
+-+|...+++.+.++.......++++|-|
T Consensus 4 l~k~~~~vl~d~~~~s~lk~g~lfvlG~S 32 (180)
T COG4475 4 LKKDTRTVLDDVQDQSELKQGQLFVLGLS 32 (180)
T ss_pred HHHHHHHHHHHHHHhhccCCCCEEEEecc
Confidence 45677777777766666677899999998
No 408
>PLN03050 pyridoxine (pyridoxamine) 5'-phosphate oxidase; Provisional
Probab=22.42 E-value=1.6e+02 Score=22.80 Aligned_cols=33 Identities=21% Similarity=0.149 Sum_probs=24.9
Q ss_pred EEEEEcCCCCCCcCchHHHHHHHHhcCCEEEEee
Q 026555 39 LIFICHGYAMECSIGMNSTAIRLANEGYACYGID 72 (237)
Q Consensus 39 ~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d 72 (237)
.|+++-|-|.+...- --+++.|.+.||+|.++-
T Consensus 62 ~V~VlcG~GNNGGDG-lv~AR~L~~~G~~V~v~~ 94 (246)
T PLN03050 62 RVLLVCGPGNNGGDG-LVAARHLAHFGYEVTVCY 94 (246)
T ss_pred eEEEEECCCCCchhH-HHHHHHHHHCCCeEEEEE
Confidence 466666777777755 467899999999987665
No 409
>cd07232 Pat_PLPL Patain-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants and fungi. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=22.21 E-value=70 Score=26.89 Aligned_cols=31 Identities=16% Similarity=0.147 Sum_probs=23.6
Q ss_pred CCceEEEEEeccchHHHHHHHhcCCCcccEE
Q 026555 110 KEKMRYLLGESMGGAMVLLLHRKKPDYFDGA 140 (237)
Q Consensus 110 ~~~~~~l~G~S~Gg~~a~~~a~~~p~~~~~~ 140 (237)
+..+-++.|-|.|+.+|..++...++.+..+
T Consensus 93 gllp~iI~GtSAGAivaalla~~t~~el~~~ 123 (407)
T cd07232 93 DLLPNVISGTSGGSLVAALLCTRTDEELKQL 123 (407)
T ss_pred CCCCCEEEEECHHHHHHHHHHcCCHHHHHHH
Confidence 4567789999999999999998655544333
No 410
>PRK04148 hypothetical protein; Provisional
Probab=22.20 E-value=2.7e+02 Score=19.30 Aligned_cols=22 Identities=18% Similarity=-0.008 Sum_probs=18.0
Q ss_pred CceEEEEEeccchHHHHHHHhc
Q 026555 111 EKMRYLLGESMGGAMVLLLHRK 132 (237)
Q Consensus 111 ~~~~~l~G~S~Gg~~a~~~a~~ 132 (237)
..++..+|-..|..+|..++..
T Consensus 17 ~~kileIG~GfG~~vA~~L~~~ 38 (134)
T PRK04148 17 NKKIVELGIGFYFKVAKKLKES 38 (134)
T ss_pred CCEEEEEEecCCHHHHHHHHHC
Confidence 4679999999888888887754
No 411
>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]
Probab=22.20 E-value=4e+02 Score=21.52 Aligned_cols=35 Identities=20% Similarity=0.266 Sum_probs=26.9
Q ss_pred EEEEcCCCCCCcCchHHHHHHHHhcCCEEEEeecCCCC
Q 026555 40 IFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHG 77 (237)
Q Consensus 40 iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G 77 (237)
+-++-|..+.-. ..+++.|.+.||.|+.+..|..-
T Consensus 4 ~ALITGITGQDG---sYLa~lLLekGY~VhGi~Rrss~ 38 (345)
T COG1089 4 VALITGITGQDG---SYLAELLLEKGYEVHGIKRRSSS 38 (345)
T ss_pred eEEEecccCCch---HHHHHHHHhcCcEEEEEeecccc
Confidence 456677776655 56889999999999999887443
No 412
>PRK09135 pteridine reductase; Provisional
Probab=22.10 E-value=1.5e+02 Score=22.27 Aligned_cols=32 Identities=19% Similarity=0.101 Sum_probs=23.1
Q ss_pred EEEEcCCCCCCcCchHHHHHHHHhcCCEEEEeecC
Q 026555 40 IFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQ 74 (237)
Q Consensus 40 iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 74 (237)
.+++-|..+... ..+++.|.++|+.|+..+.+
T Consensus 8 ~vlItGa~g~iG---~~l~~~l~~~g~~v~~~~r~ 39 (249)
T PRK09135 8 VALITGGARRIG---AAIARTLHAAGYRVAIHYHR 39 (249)
T ss_pred EEEEeCCCchHH---HHHHHHHHHCCCEEEEEcCC
Confidence 455555444333 68899999999999998865
No 413
>PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional
Probab=22.07 E-value=2.1e+02 Score=22.89 Aligned_cols=34 Identities=12% Similarity=-0.063 Sum_probs=22.9
Q ss_pred cEEEEEEcCCCCCCcCc----hHHHHHHHHhcCCEEEE
Q 026555 37 KALIFICHGYAMECSIG----MNSTAIRLANEGYACYG 70 (237)
Q Consensus 37 ~~~iv~~hG~~~~~~~~----~~~~~~~l~~~g~~v~~ 70 (237)
++.|+++||.......| |..+++.+.+.|+.++.
T Consensus 178 ~~~i~~~~~~s~~~k~Wp~e~~a~li~~l~~~~~~ivl 215 (322)
T PRK10964 178 GPYLVFLHATTRDDKHWPEAHWRELIGLLAPSGLRIKL 215 (322)
T ss_pred CCeEEEEeCCCcccccCCHHHHHHHHHHHHHCCCeEEE
Confidence 45677788865444444 36677888777888764
No 414
>PRK07326 short chain dehydrogenase; Provisional
Probab=22.07 E-value=1.5e+02 Score=22.11 Aligned_cols=31 Identities=19% Similarity=0.112 Sum_probs=21.8
Q ss_pred EEEEcCCCCCCcCchHHHHHHHHhcCCEEEEeec
Q 026555 40 IFICHGYAMECSIGMNSTAIRLANEGYACYGIDY 73 (237)
Q Consensus 40 iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~ 73 (237)
.+++-|..+... ..+++.|.++|+.|+..+.
T Consensus 8 ~ilItGatg~iG---~~la~~l~~~g~~V~~~~r 38 (237)
T PRK07326 8 VALITGGSKGIG---FAIAEALLAEGYKVAITAR 38 (237)
T ss_pred EEEEECCCCcHH---HHHHHHHHHCCCEEEEeeC
Confidence 455555444333 6788899889999998874
No 415
>KOG1532 consensus GTPase XAB1, interacts with DNA repair protein XPA [Replication, recombination and repair]
Probab=21.81 E-value=1.2e+02 Score=24.24 Aligned_cols=101 Identities=14% Similarity=0.090 Sum_probs=55.8
Q ss_pred CCcEEEEEEcCCCCCCcC-chHHHHHHHHhcCCEEEEeecCC------CCCCC-----------------CCCCC-cCCh
Q 026555 35 EPKALIFICHGYAMECSI-GMNSTAIRLANEGYACYGIDYQG------HGKSA-----------------GLSGY-IDNF 89 (237)
Q Consensus 35 ~~~~~iv~~hG~~~~~~~-~~~~~~~~l~~~g~~v~~~d~~g------~G~s~-----------------~~~~~-~~~~ 89 (237)
..+|+++++-|+.+++.. |...+...+.+...+.+++++-= ++..- ++.+. ..++
T Consensus 16 ~~~p~~ilVvGMAGSGKTTF~QrL~~hl~~~~~ppYviNLDPAv~~vpy~aniDIRDtVkYkEvMkqY~LGPNGgI~TsL 95 (366)
T KOG1532|consen 16 IQRPVIILVVGMAGSGKTTFMQRLNSHLHAKKTPPYVINLDPAVRNVPYPANIDIRDTVKYKEVMKQYQLGPNGGIVTSL 95 (366)
T ss_pred ccCCcEEEEEecCCCCchhHHHHHHHHHhhccCCCeEEeCCHHHhcCCCccCCchhhhhhHHHHHHHhCCCCCcchhhhH
Confidence 346889999999988884 44567777777655555555421 11000 11111 1233
Q ss_pred hhHHHHHHHHHHHHHhhh-h--c----CCceEEEEEeccchHHHHHH-HhcCCC
Q 026555 90 DDLVDDCFNHFTSICEKE-E--N----KEKMRYLLGESMGGAMVLLL-HRKKPD 135 (237)
Q Consensus 90 ~~~~~d~~~~~~~~~~~~-~--~----~~~~~~l~G~S~Gg~~a~~~-a~~~p~ 135 (237)
+-++..+.++++.+-++. . . -+.+|=++-||..|.|.... |..+|.
T Consensus 96 NLF~tk~dqv~~~iek~~~~~~~~liDTPGQIE~FtWSAsGsIIte~lass~pt 149 (366)
T KOG1532|consen 96 NLFATKFDQVIELIEKRAEEFDYVLIDTPGQIEAFTWSASGSIITETLASSFPT 149 (366)
T ss_pred HHHHHHHHHHHHHHHHhhcccCEEEEcCCCceEEEEecCCccchHhhHhhcCCe
Confidence 334444444444441111 1 0 24678899999988777754 555665
No 416
>KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=21.78 E-value=1.3e+02 Score=24.92 Aligned_cols=38 Identities=21% Similarity=0.310 Sum_probs=24.1
Q ss_pred cEEEEEEcCCCCCCcCchHHHHHHHHhcCCEEEEeecCCCCCC
Q 026555 37 KALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKS 79 (237)
Q Consensus 37 ~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s 79 (237)
+.+||.+...|-+.++ ..-+.-|+++||.| |+-|++.|
T Consensus 14 ra~vvVLGDvGRSPRM--qYHA~Sla~~gf~V---dliGy~~s 51 (444)
T KOG2941|consen 14 RAIVVVLGDVGRSPRM--QYHALSLAKLGFQV---DLIGYVES 51 (444)
T ss_pred eEEEEEecccCCChHH--HHHHHHHHHcCCeE---EEEEecCC
Confidence 3445555555555553 45567888999876 66677666
No 417
>PLN02924 thymidylate kinase
Probab=21.72 E-value=2e+02 Score=21.74 Aligned_cols=42 Identities=12% Similarity=0.086 Sum_probs=30.6
Q ss_pred CCcEEEEEEcCCCCCCcCc-hHHHHHHHHhcCCEEEEeecCCC
Q 026555 35 EPKALIFICHGYAMECSIG-MNSTAIRLANEGYACYGIDYQGH 76 (237)
Q Consensus 35 ~~~~~iv~~hG~~~~~~~~-~~~~~~~l~~~g~~v~~~d~~g~ 76 (237)
...+.+|.+-|..+++..- ...+.+.|...|+.|.....|+.
T Consensus 13 ~~~g~~IviEGiDGsGKsTq~~~L~~~l~~~g~~v~~~~ep~~ 55 (220)
T PLN02924 13 ESRGALIVLEGLDRSGKSTQCAKLVSFLKGLGVAAELWRFPDR 55 (220)
T ss_pred CCCCeEEEEECCCCCCHHHHHHHHHHHHHhcCCCceeeeCCCC
Confidence 3456788888888887733 35677888888999877776663
No 418
>cd07231 Pat_SDP1-like Sugar-Dependent 1 like lipase. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This acyl-hydrolase domain is homologus to yeast triacylglycerol lipase 3 and human adipose triglyceride lipase. This family includes SDP1 from Arabidopsis thaliana.
Probab=21.71 E-value=72 Score=25.82 Aligned_cols=23 Identities=17% Similarity=0.348 Sum_probs=19.2
Q ss_pred CCceEEEEEeccchHHHHHHHhc
Q 026555 110 KEKMRYLLGESMGGAMVLLLHRK 132 (237)
Q Consensus 110 ~~~~~~l~G~S~Gg~~a~~~a~~ 132 (237)
+..+-++.|-|.|+.+|..++..
T Consensus 94 gl~p~~i~GsSaGAivaa~~~~~ 116 (323)
T cd07231 94 QLLPRVIAGSSVGSIVCAIIATR 116 (323)
T ss_pred CCCCCEEEEECHHHHHHHHHHcC
Confidence 55667899999999999988764
No 419
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=21.68 E-value=1.3e+02 Score=22.70 Aligned_cols=32 Identities=25% Similarity=0.233 Sum_probs=23.2
Q ss_pred EEEEcCCCCCCcCchHHHHHHHHhcCCEEEEeecC
Q 026555 40 IFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQ 74 (237)
Q Consensus 40 iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 74 (237)
.+++.|..+... ..+++.|.++|++|+..+..
T Consensus 6 ~vlItG~sg~iG---~~la~~l~~~g~~v~~~~r~ 37 (258)
T PRK12429 6 VALVTGAASGIG---LEIALALAKEGAKVVIADLN 37 (258)
T ss_pred EEEEECCCchHH---HHHHHHHHHCCCeEEEEeCC
Confidence 455666544333 68899999999999988764
No 420
>PTZ00056 glutathione peroxidase; Provisional
Probab=21.66 E-value=2.7e+02 Score=20.65 Aligned_cols=60 Identities=13% Similarity=0.104 Sum_probs=33.1
Q ss_pred cccceeEeecCCcEEEEEEeecCCCCCcEEEEEEcCCCCCCcCc------hHHHHHHHHhcCCEEEEeecCCC
Q 026555 10 KYDEEFILNSRRVKLFTCSWIPQNQEPKALIFICHGYAMECSIG------MNSTAIRLANEGYACYGIDYQGH 76 (237)
Q Consensus 10 ~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~iv~~hG~~~~~~~~------~~~~~~~l~~~g~~v~~~d~~g~ 76 (237)
......+.+.+|..+....+ ..+++||.. +...|... +..+.+.+.+.|+.|+.+...-+
T Consensus 18 ~~pdf~l~d~~G~~vsL~~~-----kGkvvlv~f--wAswC~~C~~e~p~L~~l~~~~~~~g~~vvgv~~~~~ 83 (199)
T PTZ00056 18 SIYDYTVKTLEGTTVPMSSL-----KNKVLMITN--SASKCGLTKKHVDQMNRLHSVFNPLGLEILAFPTSQF 83 (199)
T ss_pred CCCceEEECCCCCEEeHHHh-----CCCEEEEEE--ECCCCCChHHHHHHHHHHHHHHhcCceEEEEecchhc
Confidence 34455666777876655444 234444443 44444422 13345556666899988875433
No 421
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=21.64 E-value=2.4e+02 Score=23.47 Aligned_cols=26 Identities=19% Similarity=0.221 Sum_probs=17.7
Q ss_pred HHHHHHHHHHHhhhhcCCceEEEEEeccchHHHHH
Q 026555 94 DDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLL 128 (237)
Q Consensus 94 ~d~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~ 128 (237)
+++.++++.+ +++-.|.|+||.-.+.
T Consensus 317 ~~~~~f~~~l---------~~~~~~~s~G~~~sl~ 342 (391)
T TIGR01328 317 AGAKKLLNNL---------KLIRLAVSLGDAETLI 342 (391)
T ss_pred HHHHHHHHhC---------CcceEecCCCCCcccC
Confidence 3455666555 6778899999965543
No 422
>PRK08339 short chain dehydrogenase; Provisional
Probab=21.47 E-value=1.7e+02 Score=22.55 Aligned_cols=32 Identities=19% Similarity=0.127 Sum_probs=23.0
Q ss_pred EEEEcCCCCCCcCchHHHHHHHHhcCCEEEEeecC
Q 026555 40 IFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQ 74 (237)
Q Consensus 40 iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 74 (237)
++++-|-.+. .- ..+++.|.++|++|+..+..
T Consensus 10 ~~lItGas~g--IG-~aia~~l~~~G~~V~~~~r~ 41 (263)
T PRK08339 10 LAFTTASSKG--IG-FGVARVLARAGADVILLSRN 41 (263)
T ss_pred EEEEeCCCCc--HH-HHHHHHHHHCCCEEEEEeCC
Confidence 5556554433 33 68899999999999988753
No 423
>COG0607 PspE Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism]
Probab=21.46 E-value=2.3e+02 Score=17.95 Aligned_cols=30 Identities=13% Similarity=0.293 Sum_probs=20.6
Q ss_pred CCcEEEEEEcCCCCCCcCchHHHHHHHHhcCCEEE
Q 026555 35 EPKALIFICHGYAMECSIGMNSTAIRLANEGYACY 69 (237)
Q Consensus 35 ~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~ 69 (237)
..++.+|+|.....+ ...+..|.+.||..+
T Consensus 60 ~~~~ivv~C~~G~rS-----~~aa~~L~~~G~~~~ 89 (110)
T COG0607 60 DDDPIVVYCASGVRS-----AAAAAALKLAGFTNV 89 (110)
T ss_pred CCCeEEEEeCCCCCh-----HHHHHHHHHcCCccc
Confidence 357788888754432 455678888898776
No 424
>PRK05876 short chain dehydrogenase; Provisional
Probab=21.46 E-value=1.7e+02 Score=22.75 Aligned_cols=32 Identities=19% Similarity=0.016 Sum_probs=23.4
Q ss_pred EEEEcCCCCCCcCchHHHHHHHHhcCCEEEEeecC
Q 026555 40 IFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQ 74 (237)
Q Consensus 40 iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 74 (237)
.+++-|..+... ..+++.|.++|++|+..+.+
T Consensus 8 ~vlVTGas~gIG---~ala~~La~~G~~Vv~~~r~ 39 (275)
T PRK05876 8 GAVITGGASGIG---LATGTEFARRGARVVLGDVD 39 (275)
T ss_pred EEEEeCCCchHH---HHHHHHHHHCCCEEEEEeCC
Confidence 456666554333 68899999999999988754
No 425
>PF03698 UPF0180: Uncharacterised protein family (UPF0180); InterPro: IPR005370 The members of this family are small uncharacterised proteins.
Probab=21.43 E-value=1.1e+02 Score=19.05 Aligned_cols=18 Identities=17% Similarity=0.418 Sum_probs=16.0
Q ss_pred HHHHHHHHhcCCEEEEee
Q 026555 55 NSTAIRLANEGYACYGID 72 (237)
Q Consensus 55 ~~~~~~l~~~g~~v~~~d 72 (237)
..+...|.+.||.|+-++
T Consensus 11 s~v~~~L~~~GyeVv~l~ 28 (80)
T PF03698_consen 11 SNVKEALREKGYEVVDLE 28 (80)
T ss_pred hHHHHHHHHCCCEEEecC
Confidence 688899999999998776
No 426
>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=21.39 E-value=2.1e+02 Score=22.83 Aligned_cols=36 Identities=28% Similarity=0.368 Sum_probs=25.3
Q ss_pred HHHHHHHHHHhhhhcCCceEEEEEec--cchHHHHHHHhc
Q 026555 95 DCFNHFTSICEKEENKEKMRYLLGES--MGGAMVLLLHRK 132 (237)
Q Consensus 95 d~~~~~~~~~~~~~~~~~~~~l~G~S--~Gg~~a~~~a~~ 132 (237)
-+.+++++. .-....+++.++|.| +|..++.++..+
T Consensus 144 avi~lL~~~--~i~l~Gk~v~vIG~S~ivG~Pla~lL~~~ 181 (284)
T PRK14179 144 GIMEMFREY--NVELEGKHAVVIGRSNIVGKPMAQLLLDK 181 (284)
T ss_pred HHHHHHHHh--CCCCCCCEEEEECCCCcCcHHHHHHHHHC
Confidence 344445443 223356899999997 899999998865
No 427
>TIGR03492 conserved hypothetical protein. This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown.
Probab=21.33 E-value=2.6e+02 Score=23.33 Aligned_cols=88 Identities=15% Similarity=0.209 Sum_probs=49.1
Q ss_pred EEEcCCCCCCcCchHHHHHHHHh--cCCEEEEeecCCCCCCCC--------C------CCC-cCChhhHHHHHHH-HHHH
Q 026555 41 FICHGYAMECSIGMNSTAIRLAN--EGYACYGIDYQGHGKSAG--------L------SGY-IDNFDDLVDDCFN-HFTS 102 (237)
Q Consensus 41 v~~hG~~~~~~~~~~~~~~~l~~--~g~~v~~~d~~g~G~s~~--------~------~~~-~~~~~~~~~d~~~-~~~~ 102 (237)
++..|-|.+.- - ..+++.|.+ .|++|.++.+-|.|..-. + .+. ..+..+.+.|+.+ ++..
T Consensus 2 ~~snghged~~-a-~ai~~~l~~~~~~~~v~~~p~vG~~~~~e~~~ip~~g~~~~~~sgg~~~~~~~~~~~~~~~gl~~~ 79 (396)
T TIGR03492 2 FLSNGHGEDLI-A-ARIAKALLQLSPDLNLEALPLVGEGRAYQNLGIPIIGPTKELPSGGFSYQSLRGLLRDLRAGLVGL 79 (396)
T ss_pred cCCCCchHHHH-H-HHHHHHHHhhCCCCCeEEeCcccCCHHHhhCCCceeCCCCCCCCCCccCCCHHHHHHHHHhhHHHH
Confidence 34445444433 1 367788877 589999888888764420 0 000 1345566777777 5554
Q ss_pred HHhh----hhcCCceEEEEEeccchHHHHHHHhc
Q 026555 103 ICEK----EENKEKMRYLLGESMGGAMVLLLHRK 132 (237)
Q Consensus 103 ~~~~----~~~~~~~~~l~G~S~Gg~~a~~~a~~ 132 (237)
+.+. ++...++-+++ +.||++++.+|..
T Consensus 80 ~~~~~~~~~~~~~~p~~v~--~~Gg~v~~~aA~~ 111 (396)
T TIGR03492 80 TLGQWRALRKWAKKGDLIV--AVGDIVPLLFAWL 111 (396)
T ss_pred HHHHHHHHHHHhhcCCEEE--EECcHHHHHHHHH
Confidence 4322 12212344444 5789887766653
No 428
>PRK06849 hypothetical protein; Provisional
Probab=21.30 E-value=4.5e+02 Score=21.71 Aligned_cols=22 Identities=18% Similarity=-0.062 Sum_probs=18.8
Q ss_pred HHHHHHHHhcCCEEEEeecCCC
Q 026555 55 NSTAIRLANEGYACYGIDYQGH 76 (237)
Q Consensus 55 ~~~~~~l~~~g~~v~~~d~~g~ 76 (237)
-.+++.|.+.|++|+..|....
T Consensus 18 l~iar~l~~~G~~Vi~~d~~~~ 39 (389)
T PRK06849 18 LELARLFHNAGHTVILADSLKY 39 (389)
T ss_pred HHHHHHHHHCCCEEEEEeCCch
Confidence 5789999999999999988653
No 429
>CHL00175 minD septum-site determining protein; Validated
Probab=21.29 E-value=2.3e+02 Score=22.13 Aligned_cols=38 Identities=21% Similarity=0.217 Sum_probs=28.4
Q ss_pred cEEEEEEcCCCCCCcCch-HHHHHHHHhcCCEEEEeecC
Q 026555 37 KALIFICHGYAMECSIGM-NSTAIRLANEGYACYGIDYQ 74 (237)
Q Consensus 37 ~~~iv~~hG~~~~~~~~~-~~~~~~l~~~g~~v~~~d~~ 74 (237)
..+|.+..|-|+...... ..++..|++.|++|+.+|.-
T Consensus 15 ~~vi~v~s~KGGvGKTt~a~nLA~~La~~g~~vlliD~D 53 (281)
T CHL00175 15 SRIIVITSGKGGVGKTTTTANLGMSIARLGYRVALIDAD 53 (281)
T ss_pred ceEEEEEcCCCCCcHHHHHHHHHHHHHhCCCeEEEEeCC
Confidence 356777777777666442 46788899999999998875
No 430
>PRK08703 short chain dehydrogenase; Provisional
Probab=21.29 E-value=1.7e+02 Score=21.85 Aligned_cols=32 Identities=16% Similarity=0.220 Sum_probs=22.2
Q ss_pred EEEEcCCCCCCcCchHHHHHHHHhcCCEEEEeecC
Q 026555 40 IFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQ 74 (237)
Q Consensus 40 iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 74 (237)
.+++.|..+. .- ..+++.|.++|++|+..+..
T Consensus 8 ~vlItG~sgg--iG-~~la~~l~~~g~~V~~~~r~ 39 (239)
T PRK08703 8 TILVTGASQG--LG-EQVAKAYAAAGATVILVARH 39 (239)
T ss_pred EEEEECCCCc--HH-HHHHHHHHHcCCEEEEEeCC
Confidence 4555554333 23 67899999999999988753
No 431
>TIGR00176 mobB molybdopterin-guanine dinucleotide biosynthesis protein MobB. This molybdenum cofactor biosynthesis enzyme is similar to the urease accessory protein UreG and to the hydrogenase accessory protein HypB, both GTP hydrolases involved in loading nickel into the metallocenters of their respective target enzymes.
Probab=21.17 E-value=1.7e+02 Score=20.67 Aligned_cols=38 Identities=16% Similarity=0.113 Sum_probs=26.2
Q ss_pred EEEcCCCCCCcCc-hHHHHHHHHhcCCEEEEeecCCCCC
Q 026555 41 FICHGYAMECSIG-MNSTAIRLANEGYACYGIDYQGHGK 78 (237)
Q Consensus 41 v~~hG~~~~~~~~-~~~~~~~l~~~g~~v~~~d~~g~G~ 78 (237)
+.+-|..++.... ...+...|.+.|++|..+...+|+.
T Consensus 2 i~i~G~~gsGKTtl~~~l~~~l~~~G~~V~viK~~~~~~ 40 (155)
T TIGR00176 2 LQIVGPKNSGKTTLIERLVKALKARGYRVATIKHDHHDF 40 (155)
T ss_pred EEEECCCCCCHHHHHHHHHHHHHhcCCeEEEEecccccc
Confidence 4445666666643 3577788888899999988766553
No 432
>COG1225 Bcp Peroxiredoxin [Posttranslational modification, protein turnover, chaperones]
Probab=21.08 E-value=3.2e+02 Score=19.55 Aligned_cols=59 Identities=8% Similarity=0.014 Sum_probs=37.6
Q ss_pred cccceeEeecCCcEEEEEEeecCCCCCcEEEEEEcCCCCCCcC-----chHHHHHHHHhcCCEEEEeec
Q 026555 10 KYDEEFILNSRRVKLFTCSWIPQNQEPKALIFICHGYAMECSI-----GMNSTAIRLANEGYACYGIDY 73 (237)
Q Consensus 10 ~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~iv~~hG~~~~~~~-----~~~~~~~~l~~~g~~v~~~d~ 73 (237)
......+...+|..+....+ ..+++||+...-..+... -|+...+.|.+.|..|+.+-.
T Consensus 9 ~aPdF~Lp~~~g~~v~Lsd~-----~Gk~VVLyFYPk~~TpgCT~Ea~~Frd~~~ef~~~~a~V~GIS~ 72 (157)
T COG1225 9 KAPDFELPDQDGETVSLSDL-----RGKPVVLYFYPKDFTPGCTTEACDFRDLLEEFEKLGAVVLGISP 72 (157)
T ss_pred cCCCeEeecCCCCEEehHHh-----cCCcEEEEECCCCCCCcchHHHHHHHHHHHHHHhCCCEEEEEeC
Confidence 34456677778877666555 335677777655444331 136777888888999877643
No 433
>PRK06762 hypothetical protein; Provisional
Probab=21.06 E-value=1.1e+02 Score=21.45 Aligned_cols=24 Identities=17% Similarity=0.224 Sum_probs=17.5
Q ss_pred EEEEEEcCCCCCCcCchHHHHHHHHhc
Q 026555 38 ALIFICHGYAMECSIGMNSTAIRLANE 64 (237)
Q Consensus 38 ~~iv~~hG~~~~~~~~~~~~~~~l~~~ 64 (237)
|.++++-|..+++. ..+++.|.+.
T Consensus 2 ~~li~i~G~~GsGK---ST~A~~L~~~ 25 (166)
T PRK06762 2 TTLIIIRGNSGSGK---TTIAKQLQER 25 (166)
T ss_pred CeEEEEECCCCCCH---HHHHHHHHHH
Confidence 56888889988887 5566666554
No 434
>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=20.98 E-value=1.9e+02 Score=21.51 Aligned_cols=32 Identities=25% Similarity=0.330 Sum_probs=23.1
Q ss_pred EEEEcCCCCCCcCchHHHHHHHHhcCCEEEEeecC
Q 026555 40 IFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQ 74 (237)
Q Consensus 40 iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 74 (237)
.+++.|..+... ..+++.|.++|++|+..+..
T Consensus 7 ~~lVtGas~~iG---~~ia~~l~~~G~~v~~~~r~ 38 (235)
T PRK06550 7 TVLITGAASGIG---LAQARAFLAQGAQVYGVDKQ 38 (235)
T ss_pred EEEEcCCCchHH---HHHHHHHHHCCCEEEEEeCC
Confidence 455666544333 68899999999999988765
No 435
>PRK13938 phosphoheptose isomerase; Provisional
Probab=20.92 E-value=3.1e+02 Score=20.32 Aligned_cols=25 Identities=8% Similarity=0.032 Sum_probs=21.7
Q ss_pred CCceEEEEEeccchHHHHHHHhcCC
Q 026555 110 KEKMRYLLGESMGGAMVLLLHRKKP 134 (237)
Q Consensus 110 ~~~~~~l~G~S~Gg~~a~~~a~~~p 134 (237)
..++++++|.+-.|.+|..++.+..
T Consensus 44 ~g~rI~i~G~G~S~~~A~~fa~~L~ 68 (196)
T PRK13938 44 AGARVFMCGNGGSAADAQHFAAELT 68 (196)
T ss_pred CCCEEEEEeCcHHHHHHHHHHHHcC
Confidence 5689999999999999999987653
No 436
>PF13728 TraF: F plasmid transfer operon protein
Probab=20.81 E-value=2.4e+02 Score=21.26 Aligned_cols=43 Identities=14% Similarity=0.304 Sum_probs=31.7
Q ss_pred cEEEEEEcCCCCCCcCchHHHHHHHHhc-CCEEEEeecCCCCCCC
Q 026555 37 KALIFICHGYAMECSIGMNSTAIRLANE-GYACYGIDYQGHGKSA 80 (237)
Q Consensus 37 ~~~iv~~hG~~~~~~~~~~~~~~~l~~~-g~~v~~~d~~g~G~s~ 80 (237)
...++|.-|-...|... .++...|++. |+.|+.++.-|.+...
T Consensus 122 ~gL~~F~~~~C~~C~~~-~pil~~~~~~yg~~v~~vs~DG~~~~~ 165 (215)
T PF13728_consen 122 YGLFFFYRSDCPYCQQQ-APILQQFADKYGFSVIPVSLDGRPIPS 165 (215)
T ss_pred eEEEEEEcCCCchhHHH-HHHHHHHHHHhCCEEEEEecCCCCCcC
Confidence 45666776755555545 6777888775 9999999999888764
No 437
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=20.79 E-value=1.6e+02 Score=22.30 Aligned_cols=32 Identities=22% Similarity=0.027 Sum_probs=23.1
Q ss_pred EEEEcCCCCCCcCchHHHHHHHHhcCCEEEEeecC
Q 026555 40 IFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQ 74 (237)
Q Consensus 40 iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 74 (237)
.+++-|..+... ..++..|.++|++|+..+..
T Consensus 11 ~~lItGas~giG---~~ia~~L~~~G~~vvl~~r~ 42 (254)
T PRK08085 11 NILITGSAQGIG---FLLATGLAEYGAEIIINDIT 42 (254)
T ss_pred EEEEECCCChHH---HHHHHHHHHcCCEEEEEcCC
Confidence 456666444333 68899999999999988754
No 438
>TIGR01019 sucCoAalpha succinyl-CoA synthetase, alpha subunit. ATP citrate lyases appear to form an outgroup.
Probab=20.72 E-value=4.4e+02 Score=20.99 Aligned_cols=92 Identities=11% Similarity=-0.068 Sum_probs=52.0
Q ss_pred CCcEEEEEEcCCCCCCcCchHHHHHHHHhcCCEEEEeecCCCCCCCCCCCCcCChhhHHHHHHHHHHHHHhhhhcCCceE
Q 026555 35 EPKALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEKEENKEKMR 114 (237)
Q Consensus 35 ~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 114 (237)
+.+..||+-.|++... . +.+.+...+.|.+++.|+-.|.-....... .++.. .+ ....++
T Consensus 87 Gvk~avIis~Gf~e~~--~-~~l~~~a~~~girilGPNc~Giin~~~~~~--~~~~~----------~~-----~~~G~V 146 (286)
T TIGR01019 87 GIELIVCITEGIPVHD--M-LKVKRYMEESGTRLIGPNCPGIITPGECKI--GIMPG----------HI-----HKPGNV 146 (286)
T ss_pred CCCEEEEECCCCCHHH--H-HHHHHHHHHcCCEEECCCCceEEcccccce--eeccc----------cC-----CCCCcE
Confidence 4466788888886541 2 466677777789999999877644321100 01100 00 034678
Q ss_pred EEEEeccch-HHHHHHHhcCCCcccEEEEcCCc
Q 026555 115 YLLGESMGG-AMVLLLHRKKPDYFDGAVLVAPM 146 (237)
Q Consensus 115 ~l~G~S~Gg-~~a~~~a~~~p~~~~~~vl~~~~ 146 (237)
.++.+|-+- ...+.++.+..-.+..+|.++..
T Consensus 147 aliSQSG~l~~~~~~~a~~~giG~S~~Vs~Gn~ 179 (286)
T TIGR01019 147 GIVSRSGTLTYEAVHQLTKAGFGQSTCVGIGGD 179 (286)
T ss_pred EEEeccHHHHHHHHHHHHHcCCCeEEEEEeCCC
Confidence 888777552 22334455555556777776644
No 439
>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF). Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....
Probab=20.67 E-value=2.4e+02 Score=20.24 Aligned_cols=38 Identities=18% Similarity=0.200 Sum_probs=24.1
Q ss_pred HHHHHHHHHHHHhhhhcCCceEEEEEec--cchHHHHHHHhc
Q 026555 93 VDDCFNHFTSICEKEENKEKMRYLLGES--MGGAMVLLLHRK 132 (237)
Q Consensus 93 ~~d~~~~~~~~~~~~~~~~~~~~l~G~S--~Gg~~a~~~a~~ 132 (237)
..-+.+++++. ......+++.++|.| .|-.++.++..+
T Consensus 20 p~aii~lL~~~--~~~l~Gk~v~VvGrs~~VG~Pla~lL~~~ 59 (160)
T PF02882_consen 20 PLAIIELLEYY--GIDLEGKKVVVVGRSNIVGKPLAMLLLNK 59 (160)
T ss_dssp HHHHHHHHHHT--T-STTT-EEEEE-TTTTTHHHHHHHHHHT
T ss_pred HHHHHHHHHhc--CCCCCCCEEEEECCcCCCChHHHHHHHhC
Confidence 44555566554 333467899999999 677888887765
No 440
>COG2820 Udp Uridine phosphorylase [Nucleotide transport and metabolism]
Probab=20.62 E-value=4.1e+02 Score=20.65 Aligned_cols=32 Identities=16% Similarity=0.160 Sum_probs=24.5
Q ss_pred CCcEEEEEEcCCCCCCcCchHHHHHHHHhcCCEEE
Q 026555 35 EPKALIFICHGYAMECSIGMNSTAIRLANEGYACY 69 (237)
Q Consensus 35 ~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~ 69 (237)
+.+++.|..||+|+.+. .--.+.|+..|-+++
T Consensus 56 ~g~~v~v~StGIGgPSa---aIAvEEL~~lGa~tf 87 (248)
T COG2820 56 NGKPVTVCSTGIGGPSA---AIAVEELARLGAKTF 87 (248)
T ss_pred cCeEEEEEecCCCCchH---HHHHHHHHhcCCeEE
Confidence 45789999999998766 344577888887766
No 441
>cd00883 beta_CA_cladeA Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=20.61 E-value=1.5e+02 Score=21.67 Aligned_cols=21 Identities=24% Similarity=0.134 Sum_probs=17.3
Q ss_pred CCceEEEEEeccchHHHHHHH
Q 026555 110 KEKMRYLLGESMGGAMVLLLH 130 (237)
Q Consensus 110 ~~~~~~l~G~S~Gg~~a~~~a 130 (237)
+.+.++++|||--|.+...+.
T Consensus 79 ~v~~IvV~GHs~CGav~a~~~ 99 (182)
T cd00883 79 KVKHIIVCGHYGCGGVKAALT 99 (182)
T ss_pred CCCEEEEecCCCchHHHHHHc
Confidence 788999999998887776553
No 442
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=20.59 E-value=1.7e+02 Score=21.96 Aligned_cols=32 Identities=22% Similarity=0.130 Sum_probs=23.0
Q ss_pred EEEEcCCCCCCcCchHHHHHHHHhcCCEEEEeecC
Q 026555 40 IFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQ 74 (237)
Q Consensus 40 iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 74 (237)
.+++-|..+... ..+++.|.++|++|++.+..
T Consensus 3 ~vlItGa~g~lG---~~l~~~l~~~g~~v~~~~r~ 34 (255)
T TIGR01963 3 TALVTGAASGIG---LAIALALAAAGANVVVNDLG 34 (255)
T ss_pred EEEEcCCcchHH---HHHHHHHHHCCCEEEEEeCC
Confidence 355556444333 68889999999999998765
No 443
>PRK13869 plasmid-partitioning protein RepA; Provisional
Probab=20.56 E-value=2.2e+02 Score=23.89 Aligned_cols=41 Identities=17% Similarity=0.142 Sum_probs=27.8
Q ss_pred EEEEEEcCCCCCCcCc-hHHHHHHHHhcCCEEEEeecCCCCC
Q 026555 38 ALIFICHGYAMECSIG-MNSTAIRLANEGYACYGIDYQGHGK 78 (237)
Q Consensus 38 ~~iv~~hG~~~~~~~~-~~~~~~~l~~~g~~v~~~d~~g~G~ 78 (237)
.+|.+...=|+.+... -..++..|+..|++|+.+|+--+|.
T Consensus 122 ~vIav~n~KGGvGKTTta~nLA~~LA~~G~rVLlIDlDpQ~~ 163 (405)
T PRK13869 122 QVIAVTNFKGGSGKTTTSAHLAQYLALQGYRVLAVDLDPQAS 163 (405)
T ss_pred eEEEEEcCCCCCCHHHHHHHHHHHHHhcCCceEEEcCCCCCC
Confidence 4555555445554432 2467888999999999999866654
No 444
>cd07025 Peptidase_S66 LD-Carboxypeptidase, a serine protease, includes microcin C7 self immunity protein. LD-carboxypeptidase (Muramoyltetrapeptide carboxypeptidase; EC 3.4.17.13; Merops family S66; initially described as Carboxypeptidase II) family also includes the microcin c7 self-immunity protein (MccF) as well as uncharacterized proteins including hypothetical proteins. LD-carboxypeptidase hydrolyzes the amide bond that links the dibasic amino acids to C-terminal D-amino acids. The physiological substrates of LD-carboxypeptidase are tetrapeptide fragments (such as UDP-MurNAc-tetrapeptides) that are produced when bacterial cell walls are degraded; they contain an L-configured residue (L-lysine or meso-diaminopimelic acid residue) as the penultimate residue and D-alanine as the ultimate residue. A possible role of LD-carboxypeptidase is in peptidoglycan recycling whereby the resulting tripeptide (precursor for murein synthesis) can be reconverted into peptidoglycan by attachment o
Probab=20.54 E-value=4.2e+02 Score=20.88 Aligned_cols=42 Identities=12% Similarity=-0.024 Sum_probs=24.3
Q ss_pred HHHHHHHHhcCCEEEEeecCCCCCCCCCCCCcCChhhHHHHHHHHH
Q 026555 55 NSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHF 100 (237)
Q Consensus 55 ~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~d~~~~~ 100 (237)
....+.|.+.||+|...+.-...... .-.+.++-++|+.+++
T Consensus 17 ~~~~~~L~~~G~~v~~~~~~~~~~~~----~a~s~~~Ra~dL~~a~ 58 (282)
T cd07025 17 ERAIARLESLGLEVVVGPHVLARDGY----LAGTDEERAADLNAAF 58 (282)
T ss_pred HHHHHHHHhCCCEEEeccchhhhcCc----cCCCHHHHHHHHHHHh
Confidence 66678888889999887754332110 0023445555665544
No 445
>PF14359 DUF4406: Domain of unknown function (DUF4406)
Probab=20.40 E-value=2.5e+02 Score=17.93 Aligned_cols=66 Identities=23% Similarity=0.353 Sum_probs=41.9
Q ss_pred hHHHHHHHHhcCCEEEEeecCCCCCCCCCCCCcCChhhHHHHHHHHHHHHHhhhhcCCceEEEE-E--eccchHHHHHHH
Q 026555 54 MNSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEKEENKEKMRYLL-G--ESMGGAMVLLLH 130 (237)
Q Consensus 54 ~~~~~~~l~~~g~~v~~~d~~g~G~s~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~-G--~S~Gg~~a~~~a 130 (237)
|...++.|.+.||.|+-+-.. +... ..++.++.+....++... ..++++ | .|-|+.+=..+|
T Consensus 18 f~~~a~~L~~~G~~vvnPa~~--~~~~-----~~~~~~ym~~~l~~L~~c--------D~i~~l~gWe~S~GA~~E~~~A 82 (92)
T PF14359_consen 18 FNAAAKRLRAKGYEVVNPAEL--GIPE-----GLSWEEYMRICLAMLSDC--------DAIYMLPGWENSRGARLEHELA 82 (92)
T ss_pred HHHHHHHHHHCCCEEeCchhh--CCCC-----CCCHHHHHHHHHHHHHhC--------CEEEEcCCcccCcchHHHHHHH
Confidence 367789999999999877654 1111 124566655555555432 345544 4 699999988888
Q ss_pred hcCC
Q 026555 131 RKKP 134 (237)
Q Consensus 131 ~~~p 134 (237)
....
T Consensus 83 ~~lG 86 (92)
T PF14359_consen 83 KKLG 86 (92)
T ss_pred HHCC
Confidence 7653
No 446
>TIGR03162 ribazole_cobC alpha-ribazole phosphatase. Members of this protein family include the known CobC protein of Salmonella and Eschichia coli species, and homologous proteins found in cobalamin biosynthesis regions in other bacteria. This protein is alpha-ribazole phosphatase (EC 3.1.3.73) and, like many phosphatases, can be closely related in sequence to other phosphatases with different functions. Close homologs excluded from this model include proteins with duplications, so this model is built in -g mode to suppress hits to those proteins.
Probab=20.39 E-value=3.2e+02 Score=19.31 Aligned_cols=32 Identities=6% Similarity=0.224 Sum_probs=23.0
Q ss_pred CChhhHHHHHHHHHHHHHhhhhcCCceEEEEEec
Q 026555 87 DNFDDLVDDCFNHFTSICEKEENKEKMRYLLGES 120 (237)
Q Consensus 87 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~G~S 120 (237)
.++.+..+-+..+++.+. .....+.+.+++|+
T Consensus 115 Es~~~~~~R~~~~~~~l~--~~~~~~~vlvVsHg 146 (177)
T TIGR03162 115 ESFADFYQRVSEFLEELL--KAHEGDNVLIVTHG 146 (177)
T ss_pred CCHHHHHHHHHHHHHHHH--HhCCCCeEEEEECH
Confidence 367777788888888873 33345789999886
No 447
>PRK06696 uridine kinase; Validated
Probab=20.37 E-value=2.2e+02 Score=21.34 Aligned_cols=38 Identities=11% Similarity=0.111 Sum_probs=26.5
Q ss_pred CCcEEEEEEcCCCCCCcCch-HHHHHHHHhcCCEEEEee
Q 026555 35 EPKALIFICHGYAMECSIGM-NSTAIRLANEGYACYGID 72 (237)
Q Consensus 35 ~~~~~iv~~hG~~~~~~~~~-~~~~~~l~~~g~~v~~~d 72 (237)
...|.||.+-|..+++...+ ..++..|.+.|..++.+.
T Consensus 19 ~~~~~iI~I~G~sgsGKSTlA~~L~~~l~~~g~~v~~~~ 57 (223)
T PRK06696 19 LTRPLRVAIDGITASGKTTFADELAEEIKKRGRPVIRAS 57 (223)
T ss_pred CCCceEEEEECCCCCCHHHHHHHHHHHHHHcCCeEEEec
Confidence 34678999999988888442 356666666677777643
No 448
>TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I. This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=20.37 E-value=2.3e+02 Score=22.47 Aligned_cols=36 Identities=14% Similarity=0.032 Sum_probs=25.1
Q ss_pred CcEEEEEEcCCCCCCcCc----hHHHHHHHHhcCCEEEEe
Q 026555 36 PKALIFICHGYAMECSIG----MNSTAIRLANEGYACYGI 71 (237)
Q Consensus 36 ~~~~iv~~hG~~~~~~~~----~~~~~~~l~~~g~~v~~~ 71 (237)
+++.|++.||.......| |..+++.|.++|+.++..
T Consensus 178 ~~~~i~i~~gas~~~K~wp~e~~~~l~~~l~~~~~~~vl~ 217 (319)
T TIGR02193 178 PAPYAVLLHATSRDDKTWPEERWRELARLLLARGLQIVLP 217 (319)
T ss_pred CCCEEEEEeCCCcccCCCCHHHHHHHHHHHHHCCCeEEEe
Confidence 356788888866555555 356788887778877654
No 449
>cd01518 RHOD_YceA Member of the Rhodanese Homology Domain superfamily. This CD includes Escherichia coli YceA, Bacillus subtilis YbfQ, and similar uncharacterized proteins.
Probab=20.29 E-value=1.9e+02 Score=18.23 Aligned_cols=32 Identities=19% Similarity=0.450 Sum_probs=18.1
Q ss_pred CCcEEEEEEcCCCCCCcCchHHHHHHHHhcCCE-EEEe
Q 026555 35 EPKALIFICHGYAMECSIGMNSTAIRLANEGYA-CYGI 71 (237)
Q Consensus 35 ~~~~~iv~~hG~~~~~~~~~~~~~~~l~~~g~~-v~~~ 71 (237)
+.+++||+|.+..- . ...+..|.+.||. |+..
T Consensus 60 ~~~~ivvyC~~G~r----s-~~a~~~L~~~G~~~v~~l 92 (101)
T cd01518 60 KGKKVLMYCTGGIR----C-EKASAYLKERGFKNVYQL 92 (101)
T ss_pred CCCEEEEECCCchh----H-HHHHHHHHHhCCcceeee
Confidence 44677777764221 1 2345567777884 5544
No 450
>KOG0744 consensus AAA+-type ATPase [Posttranslational modification, protein turnover, chaperones]
Probab=20.20 E-value=1.7e+02 Score=24.01 Aligned_cols=34 Identities=18% Similarity=0.069 Sum_probs=23.9
Q ss_pred EEEEEcCCCCCCcCchHHHHHHHHhcCCEEEEeecCCC
Q 026555 39 LIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGH 76 (237)
Q Consensus 39 ~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~ 76 (237)
-++++||=++++. .++.+.|+++ ..+-.-|...+
T Consensus 178 RliLlhGPPGTGK---TSLCKaLaQk-LSIR~~~~y~~ 211 (423)
T KOG0744|consen 178 RLILLHGPPGTGK---TSLCKALAQK-LSIRTNDRYYK 211 (423)
T ss_pred eEEEEeCCCCCCh---hHHHHHHHHh-heeeecCcccc
Confidence 4999999999887 5778888776 44444444333
No 451
>COG0489 Mrp ATPases involved in chromosome partitioning [Cell division and chromosome partitioning]
Probab=20.13 E-value=3e+02 Score=21.53 Aligned_cols=45 Identities=22% Similarity=0.099 Sum_probs=33.8
Q ss_pred CcEEEEEEcCCCCCCcCc-hHHHHHHHHhcCCEEEEeecCCCCCCC
Q 026555 36 PKALIFICHGYAMECSIG-MNSTAIRLANEGYACYGIDYQGHGKSA 80 (237)
Q Consensus 36 ~~~~iv~~hG~~~~~~~~-~~~~~~~l~~~g~~v~~~d~~g~G~s~ 80 (237)
.+..|...-|-++..... ...++..+++.|++|..+|.-.+|.+.
T Consensus 56 ~~~~I~V~S~kgGvGKStva~nLA~alA~~G~rVlliDaD~~gps~ 101 (265)
T COG0489 56 VKNVIAVTSGKGGVGKSTVAVNLAAALAQLGKRVLLLDADLRGPSI 101 (265)
T ss_pred cceEEEEEeCCCCCcHHHHHHHHHHHHHhcCCcEEEEeCcCCCCch
Confidence 456677777777666533 147889999999999999988877665
No 452
>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....
Probab=20.09 E-value=1.3e+02 Score=20.01 Aligned_cols=30 Identities=30% Similarity=0.426 Sum_probs=21.5
Q ss_pred eEEEEE-eccchHHHHHHHhcCCCcccEEEEc
Q 026555 113 MRYLLG-ESMGGAMVLLLHRKKPDYFDGAVLV 143 (237)
Q Consensus 113 ~~~l~G-~S~Gg~~a~~~a~~~p~~~~~~vl~ 143 (237)
++.++| ..+.|.-.+.+...+|+ ++-+.+.
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~hp~-~e~~~~~ 31 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEHPD-FELVALV 31 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTST-EEEEEEE
T ss_pred CEEEECCCCHHHHHHHHHHhcCCC-ccEEEee
Confidence 577888 77888888888777886 5544443
No 453
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=20.05 E-value=4.7e+02 Score=21.03 Aligned_cols=35 Identities=11% Similarity=0.096 Sum_probs=24.9
Q ss_pred EEEEEcCCCCCCcCchHHHHHHHHhcCCEEEEeecC
Q 026555 39 LIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQ 74 (237)
Q Consensus 39 ~iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 74 (237)
+++...|.+++.... ..+++.|.+.||.|..+-..
T Consensus 4 i~i~~~g~gG~~~~~-~~la~~L~~~g~ev~vv~~~ 38 (357)
T PRK00726 4 ILLAGGGTGGHVFPA-LALAEELKKRGWEVLYLGTA 38 (357)
T ss_pred EEEEcCcchHhhhHH-HHHHHHHHhCCCEEEEEECC
Confidence 344556787776633 68999999999998776443
No 454
>PRK05717 oxidoreductase; Validated
Probab=20.03 E-value=1.7e+02 Score=22.21 Aligned_cols=32 Identities=22% Similarity=0.210 Sum_probs=23.3
Q ss_pred EEEEcCCCCCCcCchHHHHHHHHhcCCEEEEeecC
Q 026555 40 IFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQ 74 (237)
Q Consensus 40 iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 74 (237)
.+++-|..+... ..+++.|.++|++|+..|..
T Consensus 12 ~vlItG~sg~IG---~~~a~~l~~~g~~v~~~~~~ 43 (255)
T PRK05717 12 VALVTGAARGIG---LGIAAWLIAEGWQVVLADLD 43 (255)
T ss_pred EEEEeCCcchHH---HHHHHHHHHcCCEEEEEcCC
Confidence 455666544433 68899999999999998753
No 455
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=20.01 E-value=1.5e+02 Score=22.13 Aligned_cols=31 Identities=23% Similarity=0.237 Sum_probs=22.3
Q ss_pred EEEEcCCCCCCcCchHHHHHHHHhcCCEEEEeec
Q 026555 40 IFICHGYAMECSIGMNSTAIRLANEGYACYGIDY 73 (237)
Q Consensus 40 iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~ 73 (237)
.+++.|..+... ..+++.|.++|+.|+..+.
T Consensus 7 ~ilItGasg~iG---~~l~~~l~~~g~~v~~~~r 37 (246)
T PRK05653 7 TALVTGASRGIG---RAIALRLAADGAKVVIYDS 37 (246)
T ss_pred EEEEECCCcHHH---HHHHHHHHHCCCEEEEEeC
Confidence 456666544333 6888999999999888774
No 456
>PLN03006 carbonate dehydratase
Probab=20.00 E-value=1.5e+02 Score=23.75 Aligned_cols=20 Identities=20% Similarity=0.323 Sum_probs=16.3
Q ss_pred CCceEEEEEeccchHHHHHH
Q 026555 110 KEKMRYLLGESMGGAMVLLL 129 (237)
Q Consensus 110 ~~~~~~l~G~S~Gg~~a~~~ 129 (237)
+.+.|+++|||--|.+...+
T Consensus 170 ~V~~IVV~GHs~CGaV~Aal 189 (301)
T PLN03006 170 NVENILVIGHSRCGGIQALM 189 (301)
T ss_pred CCCEEEEecCCCchHHHHHh
Confidence 78899999999888776543
No 457
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=20.00 E-value=1.6e+02 Score=21.94 Aligned_cols=32 Identities=13% Similarity=-0.074 Sum_probs=23.5
Q ss_pred EEEEcCCCCCCcCchHHHHHHHHhcCCEEEEeecC
Q 026555 40 IFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQ 74 (237)
Q Consensus 40 iv~~hG~~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 74 (237)
.+++.|..+... ..+++.|.+.|++|+..+..
T Consensus 7 ~vlItGa~g~iG---~~~a~~l~~~G~~V~~~~r~ 38 (238)
T PRK05786 7 KVAIIGVSEGLG---YAVAYFALKEGAQVCINSRN 38 (238)
T ss_pred EEEEECCCchHH---HHHHHHHHHCCCEEEEEeCC
Confidence 567777654433 57888999999999988753
Done!