Query 026565
Match_columns 237
No_of_seqs 125 out of 786
Neff 7.8
Searched_HMMs 46136
Date Fri Mar 29 09:40:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026565.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/026565hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2234 Predicted UDP-galactos 100.0 2E-44 4.3E-49 315.2 22.8 206 13-224 131-338 (345)
2 PF04142 Nuc_sug_transp: Nucle 100.0 4.7E-39 1E-43 275.6 18.9 181 13-198 56-244 (244)
3 TIGR00803 nst UDP-galactose tr 99.9 8E-26 1.7E-30 191.0 17.4 186 13-205 37-222 (222)
4 KOG1583 UDP-N-acetylglucosamin 99.9 3.3E-21 7.1E-26 163.6 10.5 201 6-212 88-319 (330)
5 PF06027 DUF914: Eukaryotic pr 99.8 1.1E-19 2.3E-24 161.8 17.8 189 13-212 118-310 (334)
6 PF08449 UAA: UAA transporter 99.8 3.8E-18 8.3E-23 150.6 18.9 204 2-212 83-302 (303)
7 PTZ00343 triose or hexose phos 99.7 2.9E-15 6.2E-20 135.0 17.9 191 6-208 147-349 (350)
8 PLN00411 nodulin MtN21 family 99.6 3.7E-14 8E-19 128.0 21.2 199 2-209 107-330 (358)
9 TIGR00817 tpt Tpt phosphate/ph 99.6 1.6E-14 3.5E-19 127.1 14.8 195 4-210 96-296 (302)
10 PRK11453 O-acetylserine/cystei 99.6 3.8E-13 8.3E-18 118.4 20.4 189 6-208 93-288 (299)
11 PRK11689 aromatic amino acid e 99.6 1.7E-13 3.7E-18 120.6 17.6 187 4-208 96-288 (295)
12 TIGR00950 2A78 Carboxylate/Ami 99.6 7.1E-13 1.5E-17 113.6 19.5 177 7-202 81-259 (260)
13 PRK11272 putative DMT superfam 99.5 5.9E-13 1.3E-17 116.9 18.2 187 6-211 103-289 (292)
14 PRK15430 putative chlorampheni 99.4 2.3E-11 4.9E-16 107.1 19.2 179 5-207 105-285 (296)
15 KOG1580 UDP-galactose transpor 99.4 4.3E-12 9.2E-17 106.4 10.2 189 13-212 124-318 (337)
16 TIGR03340 phn_DUF6 phosphonate 99.3 2.9E-11 6.2E-16 105.6 14.0 181 7-204 97-280 (281)
17 KOG1581 UDP-galactose transpor 99.3 5.8E-11 1.3E-15 102.8 14.0 193 13-211 122-317 (327)
18 COG0697 RhaT Permeases of the 99.3 5.7E-10 1.2E-14 96.1 20.4 182 8-208 105-288 (292)
19 KOG1441 Glucose-6-phosphate/ph 99.2 2.9E-12 6.4E-17 113.2 0.9 190 5-212 115-312 (316)
20 PRK10532 threonine and homoser 99.2 1.9E-09 4.2E-14 94.7 18.6 178 8-209 106-283 (293)
21 KOG3912 Predicted integral mem 99.1 2.8E-09 6.2E-14 91.6 13.3 193 13-207 125-334 (372)
22 KOG2766 Predicted membrane pro 99.0 3.1E-11 6.7E-16 102.3 -0.4 185 13-212 117-304 (336)
23 PF03151 TPT: Triose-phosphate 99.0 1.3E-08 2.9E-13 80.4 14.6 141 64-207 1-153 (153)
24 KOG1582 UDP-galactose transpor 99.0 5.6E-09 1.2E-13 89.4 11.8 203 14-234 146-364 (367)
25 COG2962 RarD Predicted permeas 98.8 9.8E-07 2.1E-11 76.5 18.6 172 10-209 109-285 (293)
26 KOG2765 Predicted membrane pro 98.8 7E-08 1.5E-12 86.0 11.3 186 13-210 198-393 (416)
27 TIGR00688 rarD rarD protein. T 98.7 9.3E-07 2E-11 75.9 16.1 151 8-182 105-255 (256)
28 TIGR00776 RhaT RhaT L-rhamnose 98.7 8.4E-07 1.8E-11 78.0 16.1 173 13-205 99-286 (290)
29 KOG4510 Permease of the drug/m 98.6 2.5E-07 5.4E-12 79.3 10.1 186 6-205 130-323 (346)
30 KOG1443 Predicted integral mem 98.6 1.1E-06 2.5E-11 76.5 13.5 187 8-210 119-318 (349)
31 KOG1442 GDP-fucose transporter 98.5 4.5E-08 9.8E-13 84.0 2.9 185 13-210 141-330 (347)
32 KOG1444 Nucleotide-sugar trans 98.5 4.3E-06 9.4E-11 73.3 13.2 193 3-212 97-305 (314)
33 PF06800 Sugar_transport: Suga 98.0 0.0002 4.4E-09 62.2 13.4 173 13-204 85-268 (269)
34 COG2510 Predicted membrane pro 97.9 7.3E-05 1.6E-09 57.5 8.6 125 65-206 5-138 (140)
35 KOG4314 Predicted carbohydrate 97.9 0.0001 2.2E-09 61.0 10.0 179 13-211 92-280 (290)
36 PF00892 EamA: EamA-like trans 97.9 0.00018 4E-09 53.8 10.9 60 146-205 65-124 (126)
37 PRK02971 4-amino-4-deoxy-L-ara 97.9 0.0012 2.7E-08 51.2 14.7 120 63-211 2-126 (129)
38 TIGR03340 phn_DUF6 phosphonate 97.6 0.0015 3.3E-08 56.9 13.4 133 65-207 3-135 (281)
39 COG5070 VRG4 Nucleotide-sugar 97.5 0.0016 3.5E-08 54.9 10.8 188 13-211 107-300 (309)
40 PF13536 EmrE: Multidrug resis 97.4 0.00024 5.3E-09 53.5 5.1 41 9-50 70-110 (113)
41 PF05653 Mg_trans_NIPA: Magnes 97.1 0.0089 1.9E-07 53.0 12.1 117 59-206 3-121 (300)
42 PRK15051 4-amino-4-deoxy-L-ara 97.1 0.005 1.1E-07 46.5 9.0 58 148-205 50-107 (111)
43 PRK15430 putative chlorampheni 97.1 0.031 6.7E-07 49.1 15.2 137 60-206 5-144 (296)
44 PRK10452 multidrug efflux syst 97.1 0.0081 1.8E-07 46.1 9.9 64 146-209 41-105 (120)
45 PF08449 UAA: UAA transporter 97.0 0.051 1.1E-06 47.9 15.5 68 144-211 73-140 (303)
46 PRK09541 emrE multidrug efflux 96.9 0.015 3.2E-07 43.9 10.0 59 150-209 45-105 (110)
47 COG5006 rhtA Threonine/homoser 96.6 0.44 9.5E-06 41.2 17.7 176 13-212 105-287 (292)
48 TIGR00688 rarD rarD protein. T 96.5 0.11 2.5E-06 44.3 14.0 53 153-205 88-140 (256)
49 PF13536 EmrE: Multidrug resis 96.5 0.033 7.1E-07 41.8 9.1 60 149-209 49-108 (113)
50 PF05653 Mg_trans_NIPA: Magnes 96.1 0.048 1E-06 48.3 9.5 36 13-48 89-124 (300)
51 COG2510 Predicted membrane pro 96.1 0.0066 1.4E-07 46.9 3.4 34 13-46 106-139 (140)
52 PRK10650 multidrug efflux syst 96.0 0.4 8.6E-06 36.1 12.8 57 149-205 49-106 (109)
53 PTZ00343 triose or hexose phos 95.8 0.86 1.9E-05 41.1 16.5 126 72-206 58-185 (350)
54 TIGR00817 tpt Tpt phosphate/ph 95.8 0.56 1.2E-05 41.1 14.9 56 151-206 81-136 (302)
55 PRK15051 4-amino-4-deoxy-L-ara 95.8 0.018 3.9E-07 43.4 4.6 33 13-45 76-108 (111)
56 COG2076 EmrE Membrane transpor 95.6 0.16 3.5E-06 38.0 9.0 58 150-207 45-103 (106)
57 PF04142 Nuc_sug_transp: Nucle 95.6 0.091 2E-06 45.2 8.9 67 146-212 28-94 (244)
58 PRK11431 multidrug efflux syst 95.5 0.19 4.2E-06 37.5 9.4 57 150-206 44-101 (105)
59 PF00892 EamA: EamA-like trans 95.3 0.023 5E-07 42.2 4.0 37 8-45 89-125 (126)
60 PRK11272 putative DMT superfam 95.3 1.1 2.5E-05 39.0 15.1 50 157-207 92-141 (292)
61 TIGR00776 RhaT RhaT L-rhamnose 95.2 0.86 1.9E-05 40.0 14.0 129 64-208 2-137 (290)
62 PRK10452 multidrug efflux syst 95.1 0.056 1.2E-06 41.4 5.3 36 13-48 70-105 (120)
63 TIGR00950 2A78 Carboxylate/Ami 95.1 0.72 1.6E-05 39.1 12.8 56 152-207 64-119 (260)
64 PLN00411 nodulin MtN21 family 94.9 1.9 4.2E-05 39.1 15.8 55 152-206 95-155 (358)
65 COG2076 EmrE Membrane transpor 94.9 0.06 1.3E-06 40.3 4.8 35 13-47 70-104 (106)
66 PRK13499 rhamnose-proton sympo 94.8 2.9 6.4E-05 37.8 18.9 68 13-80 113-191 (345)
67 PRK11689 aromatic amino acid e 94.7 1 2.2E-05 39.4 13.1 50 159-208 89-138 (295)
68 PRK11453 O-acetylserine/cystei 94.7 1.9 4.1E-05 37.7 14.9 52 156-207 80-132 (299)
69 PF06027 DUF914: Eukaryotic pr 94.6 1.9 4.1E-05 38.8 14.6 59 151-209 95-153 (334)
70 COG0697 RhaT Permeases of the 94.6 2.5 5.5E-05 35.8 16.9 56 156-211 91-147 (292)
71 PRK09541 emrE multidrug efflux 94.5 0.093 2E-06 39.6 5.2 36 13-48 70-105 (110)
72 PF04657 DUF606: Protein of un 94.3 2 4.3E-05 33.6 14.1 128 65-204 3-138 (138)
73 PF00893 Multi_Drug_Res: Small 94.2 0.22 4.9E-06 36.1 6.6 49 150-198 44-93 (93)
74 PRK02971 4-amino-4-deoxy-L-ara 94.1 0.13 2.9E-06 39.8 5.5 36 13-48 87-124 (129)
75 PRK11431 multidrug efflux syst 94.0 0.1 2.2E-06 39.0 4.5 34 13-46 69-102 (105)
76 PRK10650 multidrug efflux syst 93.6 0.13 2.8E-06 38.8 4.4 33 13-45 75-107 (109)
77 PF10639 UPF0546: Uncharacteri 92.6 0.3 6.5E-06 37.0 5.1 62 143-204 49-111 (113)
78 KOG2922 Uncharacterized conser 92.6 0.25 5.3E-06 44.0 5.3 177 13-211 103-310 (335)
79 PRK13499 rhamnose-proton sympo 91.1 3.7 8E-05 37.2 11.3 135 60-210 4-156 (345)
80 TIGR00803 nst UDP-galactose tr 89.2 4.1 8.9E-05 33.9 9.5 86 6-91 1-108 (222)
81 PF04342 DUF486: Protein of un 88.4 1.2 2.6E-05 33.2 4.9 44 161-204 62-105 (108)
82 PF10639 UPF0546: Uncharacteri 86.9 0.64 1.4E-05 35.2 2.8 32 13-44 81-112 (113)
83 PF06379 RhaT: L-rhamnose-prot 85.6 16 0.00035 32.9 11.4 138 60-212 4-158 (344)
84 COG2962 RarD Predicted permeas 84.1 29 0.00063 30.6 13.1 133 61-205 5-142 (293)
85 KOG1580 UDP-galactose transpor 83.5 1.8 4E-05 37.1 4.3 32 13-44 280-311 (337)
86 COG3169 Uncharacterized protei 83.5 5.7 0.00012 29.3 6.2 44 162-205 70-113 (116)
87 COG3238 Uncharacterized protei 83.1 22 0.00047 28.3 14.4 136 63-209 5-148 (150)
88 KOG2922 Uncharacterized conser 82.7 0.73 1.6E-05 41.0 1.7 74 137-210 66-140 (335)
89 KOG1581 UDP-galactose transpor 82.5 36 0.00077 30.4 12.5 73 140-212 88-160 (327)
90 PF07857 DUF1632: CEO family ( 81.8 16 0.00035 31.7 9.6 26 182-207 104-134 (254)
91 PF00893 Multi_Drug_Res: Small 79.5 2 4.4E-05 31.1 2.8 25 13-37 69-93 (93)
92 PHA03049 IMV membrane protein; 78.1 2.1 4.5E-05 29.1 2.3 23 190-212 5-27 (68)
93 KOG2765 Predicted membrane pro 69.3 4.8 0.0001 36.8 3.1 56 165-220 189-245 (416)
94 PF05961 Chordopox_A13L: Chord 67.7 4.5 9.8E-05 27.5 2.0 23 190-212 5-27 (68)
95 KOG1444 Nucleotide-sugar trans 62.8 1.1E+02 0.0025 27.3 13.1 136 64-209 13-151 (314)
96 COG3169 Uncharacterized protei 61.0 16 0.00034 27.0 3.9 32 13-44 82-113 (116)
97 COG4975 GlcU Putative glucose 59.8 0.23 5.1E-06 42.7 -6.6 61 13-74 99-163 (288)
98 KOG4510 Permease of the drug/m 59.4 11 0.00024 33.1 3.4 43 168-210 130-172 (346)
99 COG2271 UhpC Sugar phosphate p 58.4 1.4E+02 0.0031 28.1 10.6 50 179-228 176-228 (448)
100 PF05297 Herpes_LMP1: Herpesvi 58.2 3.3 7.1E-05 36.4 0.0 70 17-94 67-137 (381)
101 PF04342 DUF486: Protein of un 56.6 18 0.00039 27.0 3.7 29 14-42 76-104 (108)
102 KOG3788 Predicted divalent cat 52.3 34 0.00073 31.7 5.4 78 6-90 183-276 (441)
103 PF06800 Sugar_transport: Suga 52.3 1.6E+02 0.0035 25.7 9.5 47 166-212 77-127 (269)
104 COG4711 Predicted membrane pro 42.9 2E+02 0.0044 24.1 8.5 69 19-90 114-188 (217)
105 KOG4831 Unnamed protein [Funct 42.2 25 0.00055 26.4 2.5 40 166-205 84-123 (125)
106 PF06123 CreD: Inner membrane 41.9 2E+02 0.0044 26.9 9.0 82 17-109 314-397 (430)
107 PF00909 Ammonium_transp: Ammo 41.3 80 0.0017 29.0 6.3 82 8-89 153-248 (399)
108 PF09813 Coiled-coil_56: Coile 40.5 16 0.00035 26.9 1.3 24 191-214 54-77 (100)
109 PRK02237 hypothetical protein; 40.3 70 0.0015 24.0 4.6 44 164-207 60-105 (109)
110 PF02694 UPF0060: Uncharacteri 39.1 65 0.0014 24.1 4.3 49 160-208 54-104 (107)
111 COG2149 Predicted membrane pro 38.2 1.2E+02 0.0027 23.0 5.7 49 28-80 28-76 (120)
112 KOG1479 Nucleoside transporter 35.7 3.7E+02 0.008 25.0 12.5 55 157-211 148-206 (406)
113 COG3493 CitS Na+/citrate sympo 33.8 3.1E+02 0.0067 25.5 8.5 80 4-89 19-103 (438)
114 PRK11715 inner membrane protei 33.8 3.3E+02 0.0071 25.6 9.0 80 20-110 323-404 (436)
115 PF06609 TRI12: Fungal trichot 33.0 4.8E+02 0.01 25.6 14.9 18 30-47 240-257 (599)
116 COG4720 Predicted membrane pro 32.1 86 0.0019 25.6 4.3 31 129-159 68-98 (177)
117 KOG2234 Predicted UDP-galactos 31.2 4.1E+02 0.0088 24.2 13.5 58 151-208 108-165 (345)
118 KOG3912 Predicted integral mem 30.9 2.1E+02 0.0045 25.6 6.7 36 172-207 123-158 (372)
119 COG0004 AmtB Ammonia permease 29.6 4.6E+02 0.01 24.4 9.1 83 8-90 163-255 (409)
120 smart00793 AgrB Accessory gene 29.1 2E+02 0.0044 23.2 6.2 17 158-174 72-88 (184)
121 TIGR01299 synapt_SV2 synaptic 27.6 6.4E+02 0.014 25.4 10.5 20 23-42 158-177 (742)
122 PF06166 DUF979: Protein of un 26.9 2.4E+02 0.0052 25.1 6.5 51 180-236 41-91 (308)
123 TIGR00836 amt ammonium transpo 26.7 2E+02 0.0043 26.7 6.3 82 8-89 160-253 (403)
124 KOG1583 UDP-N-acetylglucosamin 25.3 56 0.0012 29.0 2.3 34 13-46 281-314 (330)
125 PF05620 DUF788: Protein of un 24.5 3.7E+02 0.008 21.5 7.0 15 222-236 155-169 (170)
126 PRK02935 hypothetical protein; 24.3 3E+02 0.0065 20.6 5.6 21 187-207 40-60 (110)
127 COG3238 Uncharacterized protei 24.1 90 0.002 24.8 3.1 25 22-46 122-146 (150)
128 PF11700 ATG22: Vacuole efflux 23.5 4.9E+02 0.011 24.5 8.5 43 163-207 100-142 (477)
129 PF02990 EMP70: Endomembrane p 22.8 4.4E+02 0.0096 25.1 8.1 37 68-104 303-339 (521)
130 PRK10666 ammonium transporter; 22.7 5.1E+02 0.011 24.2 8.2 82 8-89 186-277 (428)
131 TIGR00891 2A0112 putative sial 21.9 5.2E+02 0.011 22.3 13.3 21 24-44 4-24 (405)
132 PF05251 UPF0197: Uncharacteri 21.6 1.7E+02 0.0037 20.6 3.7 40 63-104 19-58 (77)
133 PF06379 RhaT: L-rhamnose-prot 21.0 1.7E+02 0.0037 26.5 4.5 57 27-83 134-193 (344)
134 PRK01100 putative accessory ge 20.8 3E+02 0.0064 22.9 5.8 12 158-169 84-95 (210)
135 PF07214 DUF1418: Protein of u 20.8 1.3E+02 0.0028 22.1 3.1 11 1-11 1-11 (96)
136 PF13124 DUF3963: Protein of u 20.5 2E+02 0.0044 17.1 4.0 23 79-103 6-28 (40)
137 PF11044 TMEMspv1-c74-12: Plec 20.3 13 0.00029 23.1 -1.8 19 187-205 2-20 (49)
138 PF04550 Phage_holin_2: Phage 20.3 3.4E+02 0.0074 19.6 6.1 29 22-50 26-60 (89)
139 COG4975 GlcU Putative glucose 20.2 25 0.00054 30.5 -0.8 44 166-209 91-138 (288)
No 1
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2e-44 Score=315.22 Aligned_cols=206 Identities=39% Similarity=0.600 Sum_probs=185.3
Q ss_pred HHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhhcccCCCcccc--CcccccchhHHHHHHHHHHHHHHHHHHHHHHhhcCC
Q 026565 13 FSLKFSRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGEALC--DSLFAAPIQGYLLGVLSACLSALAGVYTEFLMKKNN 90 (237)
Q Consensus 13 ~tall~~~~L~~~ls~~qw~al~ll~~Gv~l~~~~~~~~~~~--~~~~~~~~~G~~~~l~~a~~sa~a~vy~E~~~K~~~ 90 (237)
.||++++++|+||++++||.|+++++.|+.++|.+..++.+. +...++++.|+.+++.+|++||+||+|+||++|+.+
T Consensus 131 tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~~~~~a~~~~~~~n~~~G~~avl~~c~~SgfAgvYfEkiLK~s~ 210 (345)
T KOG2234|consen 131 TTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSLSPTGAKSESSAQNPFLGLVAVLVACFLSGFAGVYFEKILKGSN 210 (345)
T ss_pred HHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCCCCCCccCCCcccchhhhHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 899999999999999999999999999999999655433222 234578899999999999999999999999999999
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHhhccccccccCccccccccccchHHHHHHHHHHHhhhhhhhhhhhhhHHHHHHHHHH
Q 026565 91 DSLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNITTWMVVFNLGSTGLLVSWLMKYADNIIKVYSTSM 170 (237)
Q Consensus 91 ~~~~~~n~~L~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~il~~a~~Gl~va~vlk~~d~i~k~~a~s~ 170 (237)
.++|+||+|||++|++++++..+..|++.+.. .++|+||++.+|+++++|+.||+++++++||+||++|+|++++
T Consensus 211 ~s~wi~NiqL~~~g~~f~~l~~~~~d~~~i~~-----~gff~G~s~~vw~vVl~~a~gGLlvs~v~KyADnIlK~f~~s~ 285 (345)
T KOG2234|consen 211 VSLWIRNIQLYFFGILFNLLTILLQDGEAINE-----YGFFYGYSSIVWLVVLLNAVGGLLVSLVMKYADNILKGFSTSV 285 (345)
T ss_pred chHHHHHHHHHHHHHHHHHHHHhhcccccccc-----CCccccccHHHHHHHHHHhccchhHHHHHHHhHHHHHHHHHHH
Confidence 99999999999999999999999988877652 4699999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCCccHHHHHHHHHHHHHhHhccCCCCCCCCCCCcCcCCCc
Q 026565 171 AMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAPPGMLVDIPSTAKAAPD 224 (237)
Q Consensus 171 siv~s~lls~~~f~~~~t~~~~vG~~lV~~s~~lY~~~~~~~~~~~~~~~~~~~ 224 (237)
+++++.+.|+++||.++|..+++|+.+|+.|+++|+..|++. +.|++.|+++.
T Consensus 286 aiilt~v~S~~Lf~~~~t~~F~lG~~lVi~Si~lY~~~P~~~-~~~~~~~~~~~ 338 (345)
T KOG2234|consen 286 AIILTTVASIALFDFQLTLYFLLGALLVILSIFLYSLYPARD-AQKNYNPLEAQ 338 (345)
T ss_pred HHHHHHHHHHHHccCCchHHHHHHHHHHHHHHHHhhcCCccc-ccccCCCCccc
Confidence 999999999999999999999999999999999999888865 43444444443
No 2
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=100.00 E-value=4.7e-39 Score=275.56 Aligned_cols=181 Identities=43% Similarity=0.715 Sum_probs=165.7
Q ss_pred HHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhhcccCCCccccC--------cccccchhHHHHHHHHHHHHHHHHHHHHH
Q 026565 13 FSLKFSRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGEALCD--------SLFAAPIQGYLLGVLSACLSALAGVYTEF 84 (237)
Q Consensus 13 ~tall~~~~L~~~ls~~qw~al~ll~~Gv~l~~~~~~~~~~~~--------~~~~~~~~G~~~~l~~a~~sa~a~vy~E~ 84 (237)
+||++++++||||++++||.|++++++|+++++.++...++.+ ....++..|++++++++++||+++||+||
T Consensus 56 ~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~ 135 (244)
T PF04142_consen 56 FTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQSSDNSSSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEK 135 (244)
T ss_pred HHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCccccccccccccccccccchhHhHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999998776542111 11346789999999999999999999999
Q ss_pred HhhcCCchhHHHHHHHHHHHHHHHHHHHHhhccccccccCccccccccccchHHHHHHHHHHHhhhhhhhhhhhhhHHHH
Q 026565 85 LMKKNNDSLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNITTWMVVFNLGSTGLLVSWLMKYADNIIK 164 (237)
Q Consensus 85 ~~K~~~~~~~~~n~~L~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~il~~a~~Gl~va~vlk~~d~i~k 164 (237)
++|+++.++|.||+|||.+|++++++.....|+..+.++| +|+||++++|.+++.++++|++++.++||+||++|
T Consensus 136 ~lK~~~~s~~~~N~qL~~~gi~~~~~~~~~~~~~~~~~~g-----~f~G~~~~~~~~i~~~a~gGllva~v~KyadnI~K 210 (244)
T PF04142_consen 136 LLKRSNVSLWIQNMQLYLFGILFNLLALLLSDGSAISESG-----FFHGYSWWVWIVIFLQAIGGLLVAFVLKYADNIVK 210 (244)
T ss_pred HhcccchhHHHHHHHHHHHHHHHHHHHHhcccccccccCC-----chhhcchHHHHHHHHHHHhhHHHHHHHHHHhHHHH
Confidence 9999999999999999999999999988788877666655 99999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHH
Q 026565 165 VYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIIC 198 (237)
Q Consensus 165 ~~a~s~siv~s~lls~~~f~~~~t~~~~vG~~lV 198 (237)
+|+++++++++.++|+++||.++|..+++|+.+|
T Consensus 211 ~fa~a~siv~t~~~s~~lf~~~~s~~f~lg~~~V 244 (244)
T PF04142_consen 211 GFATAVSIVLTAVLSVLLFGFPPSLSFLLGAALV 244 (244)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCchHHhhheecC
Confidence 9999999999999999999999999999998875
No 3
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=99.94 E-value=8e-26 Score=190.99 Aligned_cols=186 Identities=26% Similarity=0.399 Sum_probs=145.4
Q ss_pred HHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhhcccCCCccccCcccccchhHHHHHHHHHHHHHHHHHHHHHHhhcCCch
Q 026565 13 FSLKFSRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGEALCDSLFAAPIQGYLLGVLSACLSALAGVYTEFLMKKNNDS 92 (237)
Q Consensus 13 ~tall~~~~L~~~ls~~qw~al~ll~~Gv~l~~~~~~~~~~~~~~~~~~~~G~~~~l~~a~~sa~a~vy~E~~~K~~~~~ 92 (237)
.++++....++++++..||.++..+..|+..++.++..+ .....++...|..+.+.++++++++++|+||..|+++..
T Consensus 37 ~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~~--~~~~~g~~~~g~~~~l~a~~~~~~~~~y~e~~~k~~~~~ 114 (222)
T TIGR00803 37 STALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSSA--KTLMFGNPVVGLSAVLSALLSSGFAGVYFEKILKDGDTM 114 (222)
T ss_pred HHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCCc--cccccccHHHHHHHHHHHHHHHhhhHHHHHHcccCCCCc
Confidence 444444555555555555555555555554444332211 011224567888888899999999999999999988888
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhccccccccCccccccccccchHHHHHHHHHHHhhhhhhhhhhhhhHHHHHHHHHHHH
Q 026565 93 LYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNITTWMVVFNLGSTGLLVSWLMKYADNIIKVYSTSMAM 172 (237)
Q Consensus 93 ~~~~n~~L~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~il~~a~~Gl~va~vlk~~d~i~k~~a~s~si 172 (237)
+|.||+++++++.+.+.......+.....+. ++++||+...|.++++++.+|++++.++||.|+++|++++++..
T Consensus 115 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~ 189 (222)
T TIGR00803 115 FWSRNLQLPLFGLFSTFSVLLWSDGTLISNF-----GFFIGYPTAVWIVGLLNVGGGLCIGGVVRYADNTTKSFVTALSI 189 (222)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhcccchhhcc-----CcccCCchHHHHHHHHHHhcCceeeehhHHhHHHHHHHHHHHHH
Confidence 9999999999998876655444444333332 47899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCccHHHHHHHHHHHHHhHhc
Q 026565 173 LLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMY 205 (237)
Q Consensus 173 v~s~lls~~~f~~~~t~~~~vG~~lV~~s~~lY 205 (237)
+++.++|+++||++++..+++|..+|+.|+++|
T Consensus 190 ~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~lY 222 (222)
T TIGR00803 190 ILSTLASVRLFDAKISSTFYLGAILVFLATFLY 222 (222)
T ss_pred HHHHHHHHHHhcCCccHHHHHHHHHHHeeeEeC
Confidence 999999999999999999999999999999988
No 4
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=99.85 E-value=3.3e-21 Score=163.64 Aligned_cols=201 Identities=16% Similarity=0.222 Sum_probs=142.3
Q ss_pred CCChhHH---------HHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhhcccCCCcccc-------Ccc-cc--cchhHHH
Q 026565 6 MITRPFH---------FSLKFSRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGEALC-------DSL-FA--APIQGYL 66 (237)
Q Consensus 6 ~i~~p~~---------~tall~~~~L~~~ls~~qw~al~ll~~Gv~l~~~~~~~~~~~-------~~~-~~--~~~~G~~ 66 (237)
||++|+| .+++++++++|||||.+|+.+++++++|++++.+.+..+... ++. .. .-..|+.
T Consensus 88 ~I~~PlHiIfRsgsll~nM~~g~il~~k~Ys~~Qy~Sv~~iTiGiiIcTl~s~~d~~~~~~~l~~~~~~~~~~~w~iGi~ 167 (330)
T KOG1583|consen 88 NIPMPLHIIFRSGSLLANMILGWILLGKRYSLRQYSSVLMITIGIIICTLFSSKDGRSKLSGLDSGSAQSDFFWWLIGIA 167 (330)
T ss_pred cccceEEEEEecCcHHHHHHHHHHhccceeehhhhhhHHhhhhhheeEEeecCcchhhhhcccccCcccccchHHHHHHH
Confidence 8999999 899999999999999999999999999999998765443211 111 11 2246888
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHH-HHHHHHHHHHH--HhhccccccccCccccccccccchHHHHHHH
Q 026565 67 LGVLSACLSALAGVYTEFLMKKNNDSLYWQNVQLY-TFGAIFNMFRL--LLDDFRGGFEKGPWWQRLFDGYNITTWMVVF 143 (237)
Q Consensus 67 ~~l~~a~~sa~a~vy~E~~~K~~~~~~~~~n~~L~-~~~~~~~~~~~--~~~~~~~~~~~g~~~~~~~~g~~~~~~~~il 143 (237)
+...+.+.||..|+|+|..+|+++.+ |.+++++. +.++|+.++.. ...++....+.-+...+.+.+--|..|..++
T Consensus 168 lL~~al~~sa~mgiyqE~~Y~kyGKh-~~EalFytH~LsLP~Flf~~~div~~~~~~~~se~~~~p~~g~~vP~~~~yLl 246 (330)
T KOG1583|consen 168 LLVFALLLSAYMGIYQETTYQKYGKH-WKEALFYTHFLSLPLFLFMGDDIVSHWRLAFKSESYLIPLLGFKVPSMWVYLL 246 (330)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCC-hHHHHHHHHHhccchHHHhcchHHHHHHHHhcCcceeccccCccccHHHHHHH
Confidence 88889999999999999999999754 77788774 67777766642 2222222211100111122222445555555
Q ss_pred HHHHh-hhhhhhhhhhhhHHHHHHHHHHHH--------HHHHHHHHHHcCCCccHHHHHHHHHHHHHhHhccCCCCCC
Q 026565 144 NLGST-GLLVSWLMKYADNIIKVYSTSMAM--------LLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAPPGML 212 (237)
Q Consensus 144 ~~a~~-Gl~va~vlk~~d~i~k~~a~s~si--------v~s~lls~~~f~~~~t~~~~vG~~lV~~s~~lY~~~~~~~ 212 (237)
.+.+. ..|+.. .+++.+.++++++ .++.++|+.+|++|+|++.++|+.+|++|+.+|...-.+|
T Consensus 247 ~n~L~Qy~Cikg-----Vy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h~lGa~lVF~Gt~~fa~~~~~~ 319 (330)
T KOG1583|consen 247 FNVLTQYFCIKG-----VYILTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWHWLGAALVFFGTLLFANVWNHP 319 (330)
T ss_pred HHHHHHHHHHHh-----hhhhhceecceEEEEeeeHHHHHHHhheeeEecCCCCHHHHHHHHHHHHHHHHHHHHHcCc
Confidence 55553 444444 3566666655442 4899999999999999999999999999999998765544
No 5
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=99.84 E-value=1.1e-19 Score=161.75 Aligned_cols=189 Identities=20% Similarity=0.215 Sum_probs=149.8
Q ss_pred HHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhhcccCCCccccCcccccchhHHHHHHHHHHHHHHHHHHHHHHhhcCCch
Q 026565 13 FSLKFSRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGEALCDSLFAAPIQGYLLGVLSACLSALAGVYTEFLMKKNNDS 92 (237)
Q Consensus 13 ~tall~~~~L~~~ls~~qw~al~ll~~Gv~l~~~~~~~~~~~~~~~~~~~~G~~~~l~~a~~sa~a~vy~E~~~K~~~~~ 92 (237)
+++++++++||+|+++.||+++++.++|++++...|...++.+...++++.|.+++++++.++|+.+|+.|+..|+.+..
T Consensus 118 ~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~~~~~~~~~~~~~i~GDll~l~~a~lya~~nV~~E~~v~~~~~~ 197 (334)
T PF06027_consen 118 FVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDVLSGSDSSSGSNPILGDLLALLGAILYAVSNVLEEKLVKKAPRV 197 (334)
T ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeecccccccCCCCCccchhHHHHHHHHHHHHHHHHHHHHhcccCCHH
Confidence 79999999999999999999999999999999887755433333456789999999999999999999999999987532
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhccccccccCccccccccccchHHHHH----HHHHHHhhhhhhhhhhhhhHHHHHHHH
Q 026565 93 LYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNITTWMV----VFNLGSTGLLVSWLMKYADNIIKVYST 168 (237)
Q Consensus 93 ~~~~n~~L~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~----il~~a~~Gl~va~vlk~~d~i~k~~a~ 168 (237)
.-.-++.+++.+++.+....-|+.++.+ -+ |++..+.. .+.......++..++++.++..-+...
T Consensus 198 --~~lg~~Glfg~ii~~iq~~ile~~~i~~-~~--------w~~~~~~~~v~~~~~lf~~y~l~p~~l~~ssAt~~nLsL 266 (334)
T PF06027_consen 198 --EFLGMLGLFGFIISGIQLAILERSGIES-IH--------WTSQVIGLLVGYALCLFLFYSLVPIVLRMSSATFFNLSL 266 (334)
T ss_pred --HHHHHHHHHHHHHHHHHHHheehhhhhc-cC--------CChhhHHHHHHHHHHHHHHHHHHHHHHHhCccceeehHH
Confidence 2245667788888887766555544321 11 22222221 122233456778889999999889999
Q ss_pred HHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHhHhccCCCCCC
Q 026565 169 SMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAPPGML 212 (237)
Q Consensus 169 s~siv~s~lls~~~f~~~~t~~~~vG~~lV~~s~~lY~~~~~~~ 212 (237)
.++.+++.++++++||+++++.+++|.++|++|..+|+..|++.
T Consensus 267 LTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~~~~~ 310 (334)
T PF06027_consen 267 LTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLAESPE 310 (334)
T ss_pred HHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEccCCcc
Confidence 99999999999999999999999999999999999999987754
No 6
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=99.80 E-value=3.8e-18 Score=150.63 Aligned_cols=204 Identities=21% Similarity=0.322 Sum_probs=151.2
Q ss_pred ccccCCChhHH---------HHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhhcccCCCccccCccc-ccchhHHHHHHHH
Q 026565 2 EAISMITRPFH---------FSLKFSRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGEALCDSLF-AAPIQGYLLGVLS 71 (237)
Q Consensus 2 ~~~~~i~~p~~---------~tall~~~~L~~~ls~~qw~al~ll~~Gv~l~~~~~~~~~~~~~~~-~~~~~G~~~~l~~ 71 (237)
+|+.-++.|.| ++++++++++|||++++||++++++++|+++....+..+++.++.. .....|+.+.+++
T Consensus 83 ~al~~i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~~~~~~~~~~~~G~~ll~~s 162 (303)
T PF08449_consen 83 AALKYISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSSSSNSSSFSSALGIILLLLS 162 (303)
T ss_pred HHHHhCChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeecccccccccccccccchhHHHHHHHH
Confidence 45667888888 9999999999999999999999999999999988775543322211 2223499999999
Q ss_pred HHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHh---hccccccccCccccccccccchHH---HHHHHHH
Q 026565 72 ACLSALAGVYTEFLMKKNNDSLYWQNVQLYTFGAIFNMFRLLL---DDFRGGFEKGPWWQRLFDGYNITT---WMVVFNL 145 (237)
Q Consensus 72 a~~sa~a~vy~E~~~K~~~~~~~~~n~~L~~~~~~~~~~~~~~---~~~~~~~~~g~~~~~~~~g~~~~~---~~~il~~ 145 (237)
.++.|+.++|+||.+|+++.+.+..-....++++++.++.... .+..+. ..+...++... ....+.+
T Consensus 163 l~~~a~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~-------~~f~~~~p~~~~~l~~~s~~~ 235 (303)
T PF08449_consen 163 LLLDAFTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSA-------IRFISAHPSVLLYLLLFSLTG 235 (303)
T ss_pred HHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHH-------HHHHHHhHHHHHHHHHHHHHH
Confidence 9999999999999999988765433333357777777665443 122111 11222222221 2223344
Q ss_pred HHhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHhHhccCCCCCC
Q 026565 146 GSTGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAPPGML 212 (237)
Q Consensus 146 a~~Gl~va~vlk~~d~i~k~~a~s~siv~s~lls~~~f~~~~t~~~~vG~~lV~~s~~lY~~~~~~~ 212 (237)
+++...+..++|+.++...+..+++--+++.++|+++||+++++..++|..+|+.|+.+|+...+|+
T Consensus 236 ~~g~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~~~~k~ 302 (303)
T PF08449_consen 236 ALGQFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSYAKKKK 302 (303)
T ss_pred HHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHHhhccC
Confidence 4444555566788888888888888889999999999999999999999999999999999887765
No 7
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=99.68 E-value=2.9e-15 Score=134.96 Aligned_cols=191 Identities=17% Similarity=0.284 Sum_probs=132.8
Q ss_pred CCChhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhhcccCCCccccCcccccchhHHHHHHHHHHHHHHHHHHHHHH
Q 026565 6 MITRPFHFSLKFSRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGEALCDSLFAAPIQGYLLGVLSACLSALAGVYTEFL 85 (237)
Q Consensus 6 ~i~~p~~~tall~~~~L~~~ls~~qw~al~ll~~Gv~l~~~~~~~~~~~~~~~~~~~~G~~~~l~~a~~sa~a~vy~E~~ 85 (237)
.-+.|+ ++++++++++|||+++++|.++++.++|+.++..++. +....|+++++++++++++.+++.+|.
T Consensus 147 ka~~Pv-ft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~~~~---------~~~~~G~~~~l~s~~~~a~~~i~~k~~ 216 (350)
T PTZ00343 147 KAAEPV-FTALLSILFLKQFLNLYAYLSLIPIVGGVALASVKEL---------HFTWLAFWCAMLSNLGSSLRSIFAKKT 216 (350)
T ss_pred HHhhHH-HHHHHHHHHhCCCccHHHHHHHHHHHHHHHheecccc---------hhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 346677 9999999999999999999999999999999874332 224679999999999999999999999
Q ss_pred hhcCCc---hhHHHHHHH--HHHHHHHHHHHHHhhccccccccCcccc--ccccccch-HHHHHHHHHHHhhhhhh----
Q 026565 86 MKKNND---SLYWQNVQL--YTFGAIFNMFRLLLDDFRGGFEKGPWWQ--RLFDGYNI-TTWMVVFNLGSTGLLVS---- 153 (237)
Q Consensus 86 ~K~~~~---~~~~~n~~L--~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~g~~~-~~~~~il~~a~~Gl~va---- 153 (237)
+++++. +....|... ...+.++.+......|...... .+.. ..+..+.. ..+..++...+.+.+..
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~--~~~~~~~~~~~~~~~~~l~~i~~s~l~~~l~n~~~f 294 (350)
T PTZ00343 217 MKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVP--VWTNYTANMTNYTKGIIIFKIFFSGVWYYLYNEVAF 294 (350)
T ss_pred hcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHH--HHHHhhhcccccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 876531 222233333 2344444444333222211000 0000 01111211 12222333333343333
Q ss_pred hhhhhhhHHHHHHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHhHhccCC
Q 026565 154 WLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAP 208 (237)
Q Consensus 154 ~vlk~~d~i~k~~a~s~siv~s~lls~~~f~~~~t~~~~vG~~lV~~s~~lY~~~ 208 (237)
..+++.+.+..+.+..+..++++++|+++|||++|+..++|.++++.|+++|+.-
T Consensus 295 ~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~lYs~~ 349 (350)
T PTZ00343 295 YCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALLYSLF 349 (350)
T ss_pred HHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHHHhhc
Confidence 3678889999999999999999999999999999999999999999999999863
No 8
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=99.64 E-value=3.7e-14 Score=128.04 Aligned_cols=199 Identities=12% Similarity=0.128 Sum_probs=133.8
Q ss_pred ccccCCChhHHHHHHHHHHH------hcCCCCHHHHHHHHHHHHHHhhhcccCCCc--------------cc-cC-cccc
Q 026565 2 EAISMITRPFHFSLKFSRLF------LRRRLSTLQWMAIVLLAVGTTTSQVKGCGE--------------AL-CD-SLFA 59 (237)
Q Consensus 2 ~~~~~i~~p~~~tall~~~~------L~~~ls~~qw~al~ll~~Gv~l~~~~~~~~--------------~~-~~-~~~~ 59 (237)
.++.+-+.|+ +++++++++ +|||++++||.++++.++|+.++...+... .. .+ ....
T Consensus 107 asll~~~~P~-~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (358)
T PLN00411 107 ASAISNITPA-LTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFYHGPRVFVASSPPYLNFRQLSPPLSSSNS 185 (358)
T ss_pred HHHHHHhhHH-HHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHccCcccccccccccccccccccccCCCcc
Confidence 3556778899 999999999 699999999999999999998865432110 00 00 0112
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhccccccccCccccccccccchHHH
Q 026565 60 APIQGYLLGVLSACLSALAGVYTEFLMKKNNDSLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNITTW 139 (237)
Q Consensus 60 ~~~~G~~~~l~~a~~sa~a~vy~E~~~K~~~~~~~~~n~~L~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~ 139 (237)
+...|..+++.+++++++..++.+|..++++.......++..+.++++..+....++.+ . + .....++...+
T Consensus 186 ~~~lG~~l~l~aa~~wa~~~il~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~l~~~~~~-~--~-----~~~~~~~~~~~ 257 (358)
T PLN00411 186 DWLIGGALLTIQGIFVSVSFILQAHIMSEYPAAFTVSFLYTVCVSIVTSMIGLVVEKNN-P--S-----VWIIHFDITLI 257 (358)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHhHHHHHHHHHHHHHHHHHHHHHccCC-c--c-----cceeccchHHH
Confidence 23569999999999999999999999888754322222233333344333333322111 0 0 01122222222
Q ss_pred HHH---HHHHHhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHhHhccCCC
Q 026565 140 MVV---FNLGSTGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAPP 209 (237)
Q Consensus 140 ~~i---l~~a~~Gl~va~vlk~~d~i~k~~a~s~siv~s~lls~~~f~~~~t~~~~vG~~lV~~s~~lY~~~~ 209 (237)
.++ +..++...+-...+|+.+....+....+.++++++++++++||++++..++|.++|+.|+++-+..+
T Consensus 258 ~i~y~~i~t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv~l~~~~~ 330 (358)
T PLN00411 258 TIVTMAIITSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGFYAVMWGK 330 (358)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhhh
Confidence 211 1222233344456788899999999999999999999999999999999999999999999987643
No 9
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=99.61 E-value=1.6e-14 Score=127.15 Aligned_cols=195 Identities=14% Similarity=0.205 Sum_probs=126.2
Q ss_pred ccCCChhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhhcccCCCccccCcccccchhHHHHHHHHHHHHHHHHHHHH
Q 026565 4 ISMITRPFHFSLKFSRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGEALCDSLFAAPIQGYLLGVLSACLSALAGVYTE 83 (237)
Q Consensus 4 ~~~i~~p~~~tall~~~~L~~~ls~~qw~al~ll~~Gv~l~~~~~~~~~~~~~~~~~~~~G~~~~l~~a~~sa~a~vy~E 83 (237)
+.+-+.|+ ++++++++++|||+++++|.++++.++|+.+....+. +....|.++++++++++++..++.+
T Consensus 96 li~~~~Pv-~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~~~~---------~~~~~G~~~~l~a~~~~a~~~v~~k 165 (302)
T TIGR00817 96 TIKAMEPF-FSVVLSAFFLGQEFPSTLWLSLLPIVGGVALASDTEL---------SFNWAGFLSAMISNITFVSRNIFSK 165 (302)
T ss_pred HHHhcchH-HHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhcCCcc---------cccHHHHHHHHHHHHHHHHHHHHHH
Confidence 34456787 9999999999999999999999999999987642211 2345799999999999999999999
Q ss_pred HHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhccccccccCccccccccccch-HHHHHHHHHHH-hh----hhhhhhhh
Q 026565 84 FLMKKNNDSLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNI-TTWMVVFNLGS-TG----LLVSWLMK 157 (237)
Q Consensus 84 ~~~K~~~~~~~~~n~~L~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~-~~~~~il~~a~-~G----l~va~vlk 157 (237)
|..++++.+.+..+......+.++.++.....+........ + .......+. ..+..++..++ .. ...-..+|
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 243 (302)
T TIGR00817 166 KAMTIKSLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHG-F-MQAISGVNVTKIYTVSLVAAMGFFHFYQQVAFMLLG 243 (302)
T ss_pred HhhccCCCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHH-H-HHhhcccCchHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 98873221211111111223333333322222211100000 0 000000111 11221211111 11 11123678
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHhHhccCCCC
Q 026565 158 YADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAPPG 210 (237)
Q Consensus 158 ~~d~i~k~~a~s~siv~s~lls~~~f~~~~t~~~~vG~~lV~~s~~lY~~~~~ 210 (237)
+.++...+....+.+++++++++++|||++|+..++|.++++.|+++|+..+.
T Consensus 244 ~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~~k~ 296 (302)
T TIGR00817 244 RVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSRVKA 296 (302)
T ss_pred cCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHHHhc
Confidence 88999999999999999999999999999999999999999999999997543
No 10
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=99.58 E-value=3.8e-13 Score=118.45 Aligned_cols=189 Identities=14% Similarity=0.133 Sum_probs=123.7
Q ss_pred CCChhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhhcccCCCccccCcccccchhHHHHHHHHHHHHHHHHHHHHHH
Q 026565 6 MITRPFHFSLKFSRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGEALCDSLFAAPIQGYLLGVLSACLSALAGVYTEFL 85 (237)
Q Consensus 6 ~i~~p~~~tall~~~~L~~~ls~~qw~al~ll~~Gv~l~~~~~~~~~~~~~~~~~~~~G~~~~l~~a~~sa~a~vy~E~~ 85 (237)
+-+.|+ ++.+++++++|||++++||.++++.++|+.+...++.+. .+.+..|.++++++++++++..++.+|.
T Consensus 93 ~~~~pi-~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~~~~~~------~~~~~~G~~l~l~aal~~a~~~v~~~~~ 165 (299)
T PRK11453 93 LQAQAF-FTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIEDSLNG------QHVAMLGFMLTLAAAFSWACGNIFNKKI 165 (299)
T ss_pred HHhHHH-HHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhccccCCC------cchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345676 899999999999999999999999999998877432211 1223579999999999999999999997
Q ss_pred hhcCCchhHHHHHHH--HHHHHHHHHHHHHhhccccccccCccccccccccchHHHHHHHHHHH-----hhhhhhhhhhh
Q 026565 86 MKKNNDSLYWQNVQL--YTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNITTWMVVFNLGS-----TGLLVSWLMKY 158 (237)
Q Consensus 86 ~K~~~~~~~~~n~~L--~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~il~~a~-----~Gl~va~vlk~ 158 (237)
.|+.+.. ....... ...+.+.........+...... ..+..+++..|..++..++ +..+....+|+
T Consensus 166 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~l~~l~i~~t~~~~~l~~~~l~~ 238 (299)
T PRK11453 166 MSHSTRP-AVMSLVVWSALIPIIPFFVASLILDGSATMI------HSLVTIDMTTILSLMYLAFVATIVGYGIWGTLLGR 238 (299)
T ss_pred hcccCcc-chhHHHHHHHHHHHHHHHHHHHHhcCchhhh------hhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 6654321 1111111 1222111111111111110000 0111233333333333333 33333344577
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHhHhccCC
Q 026565 159 ADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAP 208 (237)
Q Consensus 159 ~d~i~k~~a~s~siv~s~lls~~~f~~~~t~~~~vG~~lV~~s~~lY~~~ 208 (237)
.++...+....+.++++.+++++++||++++..++|..+++.|+++-..+
T Consensus 239 ~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~ 288 (299)
T PRK11453 239 YETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFG 288 (299)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcc
Confidence 77777788888999999999999999999999999999999999876543
No 11
>PRK11689 aromatic amino acid exporter; Provisional
Probab=99.57 E-value=1.7e-13 Score=120.55 Aligned_cols=187 Identities=12% Similarity=0.126 Sum_probs=126.1
Q ss_pred ccCCChhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhhcccCCCccccC--cccccchhHHHHHHHHHHHHHHHHHH
Q 026565 4 ISMITRPFHFSLKFSRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGEALCD--SLFAAPIQGYLLGVLSACLSALAGVY 81 (237)
Q Consensus 4 ~~~i~~p~~~tall~~~~L~~~ls~~qw~al~ll~~Gv~l~~~~~~~~~~~~--~~~~~~~~G~~~~l~~a~~sa~a~vy 81 (237)
+.+-+.|+ ++++++++++|||++++||.++++.++|+.++..++.+.+..+ ....+...|..+++.+++++|+..++
T Consensus 96 ~l~~~~Pi-~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~A~~~v~ 174 (295)
T PRK11689 96 MVNYLWPS-LTILFAVLFNGQKANWLLIPGLLLALAGVAWVLGGDNGLSLAELINNIASNPLSYGLAFIGAFIWAAYCNV 174 (295)
T ss_pred HHHHHhHH-HHHHHHHHHhcCCccHHHHHHHHHHHHhHhheecCCccchhhhhhhccccChHHHHHHHHHHHHHHHHHHH
Confidence 34456788 9999999999999999999999999999988875432111000 01112356999999999999999999
Q ss_pred HHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhccccccccCccccccccccchHHHHHHHH----HHHhhhhhhhhhh
Q 026565 82 TEFLMKKNNDSLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNITTWMVVFN----LGSTGLLVSWLMK 157 (237)
Q Consensus 82 ~E~~~K~~~~~~~~~n~~L~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~il~----~a~~Gl~va~vlk 157 (237)
.+|..++.+. . .......+..+ .+.....+.. . ..+++..|..++. ..++..+-...+|
T Consensus 175 ~k~~~~~~~~-~---~~~~~~~~~~l-~~~~~~~~~~-~-----------~~~~~~~~~~l~~~~~~t~~~~~l~~~al~ 237 (295)
T PRK11689 175 TRKYARGKNG-I---TLFFILTALAL-WIKYFLSPQP-A-----------MVFSLPAIIKLLLAAAAMGFGYAAWNVGIL 237 (295)
T ss_pred HhhccCCCCc-h---hHHHHHHHHHH-HHHHHHhcCc-c-----------ccCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9998655532 1 11111122221 2211222110 0 0112222222222 2223344456678
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHhHhccCC
Q 026565 158 YADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAP 208 (237)
Q Consensus 158 ~~d~i~k~~a~s~siv~s~lls~~~f~~~~t~~~~vG~~lV~~s~~lY~~~ 208 (237)
+.+...-+....+.++++++++++++||++++..++|.++|+.|+++-...
T Consensus 238 ~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~~ 288 (295)
T PRK11689 238 HGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWLA 288 (295)
T ss_pred ccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhhh
Confidence 889998999999999999999999999999999999999999999877543
No 12
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=99.55 E-value=7.1e-13 Score=113.64 Aligned_cols=177 Identities=17% Similarity=0.137 Sum_probs=124.5
Q ss_pred CChhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhhcccCCCccccCcccccchhHHHHHHHHHHHHHHHHHHHHHHh
Q 026565 7 ITRPFHFSLKFSRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGEALCDSLFAAPIQGYLLGVLSACLSALAGVYTEFLM 86 (237)
Q Consensus 7 i~~p~~~tall~~~~L~~~ls~~qw~al~ll~~Gv~l~~~~~~~~~~~~~~~~~~~~G~~~~l~~a~~sa~a~vy~E~~~ 86 (237)
-+.|+ ++++++.+++|||++++||.++++.++|+.+...++. .+....|+.+++.++++.+..+++.+|..
T Consensus 81 ~~~P~-~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~~~~~--------~~~~~~G~~~~l~a~~~~a~~~~~~k~~~ 151 (260)
T TIGR00950 81 YLAPL-YVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLLSDGN--------LSINPAGLLLGLGSGISFALGTVLYKRLV 151 (260)
T ss_pred hhhHH-HHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhccCCc--------ccccHHHHHHHHHHHHHHHHHHHHHhHHh
Confidence 35677 9999999999999999999999999999998764331 12346799999999999999999999888
Q ss_pred hcCCchhHHHHHHHHHHHHHHHHHHHHhhccccccccCccccccccccch--HHHHHHHHHHHhhhhhhhhhhhhhHHHH
Q 026565 87 KKNNDSLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNI--TTWMVVFNLGSTGLLVSWLMKYADNIIK 164 (237)
Q Consensus 87 K~~~~~~~~~n~~L~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~--~~~~~il~~a~~Gl~va~vlk~~d~i~k 164 (237)
++.+.+....+...+..+.++........+... ..+.... ..+.-++...++..+....+|+.+...-
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~ 221 (260)
T TIGR00950 152 KKEGPELLQFTGWVLLLGALLLLPFAWFLGPNP----------QALSLQWGALLYLGLIGTALAYFLWNKGLTLVDPSAA 221 (260)
T ss_pred hcCCchHHHHHHHHHHHHHHHHHHHHHhcCCCC----------CcchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHH
Confidence 766533222222223334333333222221110 0111111 1222223334455555666788888888
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHh
Q 026565 165 VYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSL 202 (237)
Q Consensus 165 ~~a~s~siv~s~lls~~~f~~~~t~~~~vG~~lV~~s~ 202 (237)
+....+.++++.+++++++||+++...++|..+++.|+
T Consensus 222 s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~ 259 (260)
T TIGR00950 222 SILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAV 259 (260)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999885
No 13
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=99.54 E-value=5.9e-13 Score=116.86 Aligned_cols=187 Identities=16% Similarity=0.194 Sum_probs=124.9
Q ss_pred CCChhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhhcccCCCccccCcccccchhHHHHHHHHHHHHHHHHHHHHHH
Q 026565 6 MITRPFHFSLKFSRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGEALCDSLFAAPIQGYLLGVLSACLSALAGVYTEFL 85 (237)
Q Consensus 6 ~i~~p~~~tall~~~~L~~~ls~~qw~al~ll~~Gv~l~~~~~~~~~~~~~~~~~~~~G~~~~l~~a~~sa~a~vy~E~~ 85 (237)
.-+.|+ ++++++++ +|||++++||.++++.++|+.+...++.. +....|.++++++++++|+.+++.+|.
T Consensus 103 ~~~~Pl-~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~~~~~~--------~~~~~G~l~~l~a~~~~a~~~~~~~~~ 172 (292)
T PRK11272 103 VATVPL-FTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLNSGGNL--------SGNPWGAILILIASASWAFGSVWSSRL 172 (292)
T ss_pred HHHHHH-HHHHHHHH-hcccCchhHHHHHHHHHHhHHHHhcCccc--------ccchHHHHHHHHHHHHHHHHHHHHHhc
Confidence 345777 89999985 69999999999999999999887643211 223579999999999999999999886
Q ss_pred hhcCCchhHHHHHHHHHHHHHHHHHHHHhhccccccccCccccccccccchHHHHHHHHHHHhhhhhhhhhhhhhHHHHH
Q 026565 86 MKKNNDSLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNITTWMVVFNLGSTGLLVSWLMKYADNIIKV 165 (237)
Q Consensus 86 ~K~~~~~~~~~n~~L~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~il~~a~~Gl~va~vlk~~d~i~k~ 165 (237)
.+++ +......++...+.+.........+..... .-...|....+..++...++..+....+|+.+...-+
T Consensus 173 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~i~~l~i~~s~~~~~l~~~~~~~~~~~~~s 243 (292)
T PRK11272 173 PLPV--GMMAGAAEMLAAGVVLLIASLLSGERLTAL-------PTLSGFLALGYLAVFGSIIAISAYMYLLRNVRPALAT 243 (292)
T ss_pred CCCc--chHHHHHHHHHHHHHHHHHHHHcCCccccc-------CCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHH
Confidence 5432 223223333333333222221111110000 0011121122222233333444455556888888888
Q ss_pred HHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHhHhccCCCCC
Q 026565 166 YSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAPPGM 211 (237)
Q Consensus 166 ~a~s~siv~s~lls~~~f~~~~t~~~~vG~~lV~~s~~lY~~~~~~ 211 (237)
....+.++++.+++++++||++|...++|.++++.|+++.+..+++
T Consensus 244 ~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~~~~ 289 (292)
T PRK11272 244 SYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLGKYL 289 (292)
T ss_pred HHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHhh
Confidence 8888999999999999999999999999999999999988765543
No 14
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=99.42 E-value=2.3e-11 Score=107.08 Aligned_cols=179 Identities=13% Similarity=0.180 Sum_probs=117.5
Q ss_pred cCCChhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhhcccCCCccccCcccccchhHHHHHHHHHHHHHHHHHHHHH
Q 026565 5 SMITRPFHFSLKFSRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGEALCDSLFAAPIQGYLLGVLSACLSALAGVYTEF 84 (237)
Q Consensus 5 ~~i~~p~~~tall~~~~L~~~ls~~qw~al~ll~~Gv~l~~~~~~~~~~~~~~~~~~~~G~~~~l~~a~~sa~a~vy~E~ 84 (237)
.+-+.|+ ++++++++++|||++++||.++++.++|+.++..++. +.. ...+++++++|+..++.+|
T Consensus 105 l~~~~Pi-~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~~~~~---------~~~----~~~l~aa~~~a~~~i~~r~ 170 (296)
T PRK15430 105 GYFINPL-VNIVLGMIFLGERFRRMQWLAVILAICGVLVQLWTFG---------SLP----IIALGLAFSFAFYGLVRKK 170 (296)
T ss_pred HHHHHHH-HHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHcC---------Ccc----HHHHHHHHHHHHHHHHHHh
Confidence 3446788 9999999999999999999999999999988753211 111 3567788999999999888
Q ss_pred HhhcCCchhHHHHHHHHHHHHHHHHHHHHhhccccccccCccccccccccchHHH--HHHHHHHHhhhhhhhhhhhhhHH
Q 026565 85 LMKKNNDSLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNITTW--MVVFNLGSTGLLVSWLMKYADNI 162 (237)
Q Consensus 85 ~~K~~~~~~~~~n~~L~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~--~~il~~a~~Gl~va~vlk~~d~i 162 (237)
..+++..+....+.....++.+... ...+... .. .....+..+.+ ......++...+....+|+.++.
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~-~~------~~~~~~~~~~~~~~~g~~t~i~~~~~~~a~~~~~a~ 240 (296)
T PRK15430 171 IAVEAQTGMLIETMWLLPVAAIYLF---AIADSST-SH------MGQNPMSLNLLLIAAGIVTTVPLLCFTAAATRLRLS 240 (296)
T ss_pred cCCCCchhHHHHHHHHHHHHHHHHH---HHccCCc-cc------ccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHH
Confidence 6432222222223333223222211 1111100 00 00011111111 11223344556667778999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHhHhccC
Q 026565 163 IKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFA 207 (237)
Q Consensus 163 ~k~~a~s~siv~s~lls~~~f~~~~t~~~~vG~~lV~~s~~lY~~ 207 (237)
.-+....+.++++.+++++++||++++..++|.++|+.++.+...
T Consensus 241 ~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~~~ 285 (296)
T PRK15430 241 TLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFVM 285 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999877665543
No 15
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.36 E-value=4.3e-12 Score=106.35 Aligned_cols=189 Identities=14% Similarity=0.146 Sum_probs=123.3
Q ss_pred HHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhhcccCCCccccCcccccchhHHHHHHHHHHHHHHHHHHHHHHhhcCCch
Q 026565 13 FSLKFSRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGEALCDSLFAAPIQGYLLGVLSACLSALAGVYTEFLMKKNNDS 92 (237)
Q Consensus 13 ~tall~~~~L~~~ls~~qw~al~ll~~Gv~l~~~~~~~~~~~~~~~~~~~~G~~~~l~~a~~sa~a~vy~E~~~K~~~~~ 92 (237)
=+++++.++.||+++|+++++++++++||++.-+++.+.... .......|-++.+++-..-|+.|..+||+-+.+.++
T Consensus 124 PVMilGVl~~~KsY~w~kY~cVL~IV~GValFmYK~~Kv~g~--e~~t~g~GElLL~lSL~mDGlTg~~Qdrira~yq~~ 201 (337)
T KOG1580|consen 124 PVMILGVLFAHKSYHWRKYCCVLMIVVGVALFMYKENKVGGA--EDKTFGFGELLLILSLAMDGLTGSIQDRIRASYQRT 201 (337)
T ss_pred ceeeeehhhhcccccHHHHHHHHHHHHHHHHhhccccccCCC--cccccchHHHHHHHHHHhcccchhHHHHHHHhhccC
Confidence 348999999999999999999999999999998876543211 223456788888888888999999999987765432
Q ss_pred --hHHHHHHHHHHHHHHHHHHHHhh-ccccccccCccccccccccchHHH---HHHHHHHHhhhhhhhhhhhhhHHHHHH
Q 026565 93 --LYWQNVQLYTFGAIFNMFRLLLD-DFRGGFEKGPWWQRLFDGYNITTW---MVVFNLGSTGLLVSWLMKYADNIIKVY 166 (237)
Q Consensus 93 --~~~~n~~L~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~g~~~~~~---~~il~~a~~Gl~va~vlk~~d~i~k~~ 166 (237)
-.+.++++ ++.+....+.+.. |..+.. .|-+.++...| ++-+..++|+.++=..+-+.+....+.
T Consensus 202 g~~MM~~~Nl--wStL~Lg~g~lfTGElweF~-------yF~~RhP~~~~~l~l~ai~s~LGQ~fIF~tv~~FgPLtCSi 272 (337)
T KOG1580|consen 202 GTSMMFYTNL--WSTLYLGAGLLFTGELWEFF-------YFVQRHPYVFWDLTLLAIASCLGQWFIFKTVEEFGPLTCSI 272 (337)
T ss_pred chhhHHHHHH--HHHHHhhhhheehhhHHHHH-------HHHHhccHHHHHHHHHHHHHHhhhHHHHHHHHHhCCeeEEE
Confidence 12233333 4554444433322 111100 11122222222 122233344444444444455555555
Q ss_pred HHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHhHhccCCCCCC
Q 026565 167 STSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAPPGML 212 (237)
Q Consensus 167 a~s~siv~s~lls~~~f~~~~t~~~~vG~~lV~~s~~lY~~~~~~~ 212 (237)
.++.--.+++++|+++|++|++...++|..+|+.+...=...-++.
T Consensus 273 vTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~D~~~GK~a 318 (337)
T KOG1580|consen 273 VTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTADVVDGKKA 318 (337)
T ss_pred EeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhhHhhcCCcC
Confidence 5555567999999999999999999999999999987665555543
No 16
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=99.33 E-value=2.9e-11 Score=105.58 Aligned_cols=181 Identities=17% Similarity=0.222 Sum_probs=109.8
Q ss_pred CChhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhhcccCCCccccCcccccchhHHHHHHHHHHHHHHHHHHHHHHh
Q 026565 7 ITRPFHFSLKFSRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGEALCDSLFAAPIQGYLLGVLSACLSALAGVYTEFLM 86 (237)
Q Consensus 7 i~~p~~~tall~~~~L~~~ls~~qw~al~ll~~Gv~l~~~~~~~~~~~~~~~~~~~~G~~~~l~~a~~sa~a~vy~E~~~ 86 (237)
-+.|+ ++++++++++|||++++||.++++.++|+.+...++.. .....|..+.+++++++++..++.+|..
T Consensus 97 ~~~p~-~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~~~~~--------~~~~~g~~~~l~aal~~a~~~i~~k~~~ 167 (281)
T TIGR03340 97 RSSPL-LVAIWATLTLGETLSPLAWLGILIITLGLLVLGLSRFA--------QHRRKAYAWALAAALGTAIYSLSDKAAA 167 (281)
T ss_pred hhhHH-HHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhccccc--------ccchhHHHHHHHHHHHHHHhhhhccccc
Confidence 34677 99999999999999999999999999999887644321 1123577788889999888888766653
Q ss_pred hcCCch--h-HHHHHHHHHHHHHHHHHHHHhhccccccccCccccccccccchHHHHHHHHHHHhhhhhhhhhhhhhHHH
Q 026565 87 KKNNDS--L-YWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNITTWMVVFNLGSTGLLVSWLMKYADNII 163 (237)
Q Consensus 87 K~~~~~--~-~~~n~~L~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~il~~a~~Gl~va~vlk~~d~i~ 163 (237)
++.+.. . +....++...+.++.... ...+...... ....+-...+...+...++..+....+|+.+...
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-------~~~~~~~~~~~~~~~s~l~~~l~~~al~~~~a~~ 239 (281)
T TIGR03340 168 LGVPAFYSALGYLGIGFLAMGWPFLLLY-LKRHGRSMFP-------YARQILPSATLGGLMIGGAYALVLWAMTRLPVAT 239 (281)
T ss_pred cchhcccccHHHHHHHHHHHHHHHHHHH-HHHhccchhh-------hHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCceE
Confidence 332211 1 111111111112222211 1111110000 0000101112222222233333334456666555
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHhHh
Q 026565 164 KVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHM 204 (237)
Q Consensus 164 k~~a~s~siv~s~lls~~~f~~~~t~~~~vG~~lV~~s~~l 204 (237)
-+....++++++.+++++++||+++...++|.++++.|+++
T Consensus 240 ~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l 280 (281)
T TIGR03340 240 VVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV 280 (281)
T ss_pred EEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence 55566778999999999999999999999999999999875
No 17
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.30 E-value=5.8e-11 Score=102.77 Aligned_cols=193 Identities=13% Similarity=0.126 Sum_probs=142.1
Q ss_pred HHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhhcccCCCccccCcccccchhHHHHHHHHHHHHHHHHHHHHHHhhcCCch
Q 026565 13 FSLKFSRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGEALCDSLFAAPIQGYLLGVLSACLSALAGVYTEFLMKKNNDS 92 (237)
Q Consensus 13 ~tall~~~~L~~~ls~~qw~al~ll~~Gv~l~~~~~~~~~~~~~~~~~~~~G~~~~l~~a~~sa~a~vy~E~~~K~~~~~ 92 (237)
=+++++.++-|+|++++++++.+++..|+.+..+.+.+++..+.+..+..+|+.++...-++-|+.+..+++++|+++.+
T Consensus 122 PVmlmg~Lvy~~ky~~~eYl~~~LIs~GvsiF~l~~~s~s~~~~g~~ns~~G~~Ll~~~L~fDgfTn~tQd~lf~~~k~s 201 (327)
T KOG1581|consen 122 PVMLMGTLVYGRKYSSFEYLVAFLISLGVSIFSLFPNSDSSSKSGRENSPIGILLLFGYLLFDGFTNATQDSLFKKYKVS 201 (327)
T ss_pred HHHHHHHHHhcCccCcHHHHHHHHHHhheeeEEEecCCCCccccCCCCchHhHHHHHHHHHHHhhHHhHHHHHhccCCcc
Confidence 67899999999999999999999999999998876555443444556788999999888889999999999999988876
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhccccccccCccccccccccchH---HHHHHHHHHHhhhhhhhhhhhhhHHHHHHHHH
Q 026565 93 LYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNIT---TWMVVFNLGSTGLLVSWLMKYADNIIKVYSTS 169 (237)
Q Consensus 93 ~~~~n~~L~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~---~~~~il~~a~~Gl~va~vlk~~d~i~k~~a~s 169 (237)
-|-...-+-+++.+.+.......+.. . + +..|-.-+... ..+.-..+++|++.+...+..-++++-+..++
T Consensus 202 ~~~mM~~vNLf~~i~~~~~li~qg~~-~-~----av~F~~~hp~~~~Di~l~s~~gavGQ~FI~~TI~~FGslt~t~I~t 275 (327)
T KOG1581|consen 202 SLHMMFGVNLFSAILNGTYLILQGHL-L-P----AVSFIKEHPDVAFDILLYSTCGAVGQLFIFYTIERFGSLTFTTIMT 275 (327)
T ss_pred HhHHHHHHHHHHHHHHHHhhhcCCCC-c-h----HHHHHHcChhHHHHHHHHHHhhhhhhheehhhHhhcccHHHHHHHH
Confidence 55333333468888887764332110 0 0 01122222222 33444566667777777777777776665555
Q ss_pred HHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHhHhccCCCCC
Q 026565 170 MAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAPPGM 211 (237)
Q Consensus 170 ~siv~s~lls~~~f~~~~t~~~~vG~~lV~~s~~lY~~~~~~ 211 (237)
.==.+++++|++.||+++++..++|..+|+.|+++-....++
T Consensus 276 tRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l~~~~k~~ 317 (327)
T KOG1581|consen 276 TRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFLEILLKKK 317 (327)
T ss_pred HHHHHHHHHHHHHhCCccchhhccCeeeehHHHHHHHHHHHh
Confidence 555789999999999999999999999999999877665555
No 18
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=99.30 E-value=5.7e-10 Score=96.06 Aligned_cols=182 Identities=20% Similarity=0.260 Sum_probs=119.0
Q ss_pred ChhHHHHHHHHH-HHhcCCCCHHHHHHHHHHHHHHhhhcccCCCccccCcccccchhHHHHHHHHHHHHHHHHHHHHHHh
Q 026565 8 TRPFHFSLKFSR-LFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGEALCDSLFAAPIQGYLLGVLSACLSALAGVYTEFLM 86 (237)
Q Consensus 8 ~~p~~~tall~~-~~L~~~ls~~qw~al~ll~~Gv~l~~~~~~~~~~~~~~~~~~~~G~~~~l~~a~~sa~a~vy~E~~~ 86 (237)
+.|+ +++++++ +++|||.++++|.++++.+.|+.++..++..... . +..|.++.+++++..++..++.++..
T Consensus 105 ~~p~-~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~~~~-----~-~~~g~~~~l~a~~~~a~~~~~~~~~~ 177 (292)
T COG0697 105 LLPL-FTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGGGGGI-----L-SLLGLLLALAAALLWALYTALVKRLS 177 (292)
T ss_pred HHHH-HHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCCcchh-----H-HHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 4566 8899997 7779999999999999999999999876643210 1 57899999999999999999999987
Q ss_pred hcCCchhHHHHHH-HHHHHHHHHHHHHHhhccccccccCccccccccccchHHHHHHHHHHHhhhhhhhhhhhhhHHHHH
Q 026565 87 KKNNDSLYWQNVQ-LYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNITTWMVVFNLGSTGLLVSWLMKYADNIIKV 165 (237)
Q Consensus 87 K~~~~~~~~~n~~-L~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~il~~a~~Gl~va~vlk~~d~i~k~ 165 (237)
+.+.. . ... +...+...........+.. ... ....+....+..++...++..+....++..+...-+
T Consensus 178 -~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~---~~~-----~~~~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~ 245 (292)
T COG0697 178 -RLGPV-T--LALLLQLLLALLLLLLFFLSGFG---API-----LSRAWLLLLYLGVFSTGLAYLLWYYALRLLGASLVA 245 (292)
T ss_pred -CCChH-H--HHHHHHHHHHHHHHHHHHhcccc---ccC-----CHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHH
Confidence 33221 1 111 1111111111111111111 000 111121122222222223333344455666666666
Q ss_pred HHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHhHhccCC
Q 026565 166 YSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAP 208 (237)
Q Consensus 166 ~a~s~siv~s~lls~~~f~~~~t~~~~vG~~lV~~s~~lY~~~ 208 (237)
....+.++.+.+++++++||+++...++|.++++.|+.+....
T Consensus 246 ~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~ 288 (292)
T COG0697 246 LLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLR 288 (292)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcc
Confidence 6667888999999999999999999999999999999998866
No 19
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=99.20 E-value=2.9e-12 Score=113.16 Aligned_cols=190 Identities=17% Similarity=0.250 Sum_probs=135.7
Q ss_pred cCCChhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhhcccCCCccccCcccccchhHHHHHHHHHHHHHHHHHHHHH
Q 026565 5 SMITRPFHFSLKFSRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGEALCDSLFAAPIQGYLLGVLSACLSALAGVYTEF 84 (237)
Q Consensus 5 ~~i~~p~~~tall~~~~L~~~ls~~qw~al~ll~~Gv~l~~~~~~~~~~~~~~~~~~~~G~~~~l~~a~~sa~a~vy~E~ 84 (237)
.+..+|. +|.++++++.+|++++.-|.+++.++.||.++...+. +..+.|++.++.+.+..++.+++.++
T Consensus 115 iKa~~P~-~tvl~~~~~~~~~~s~~~~lsL~piv~GV~ias~~e~---------~fn~~G~i~a~~s~~~~al~~I~~~~ 184 (316)
T KOG1441|consen 115 IKALMPP-FTVLLSVLLLGKTYSSMTYLSLLPIVFGVAIASVTEL---------SFNLFGFISAMISNLAFALRNILSKK 184 (316)
T ss_pred HHhhcch-hHHHHHHHHhCCCCcceEEEEEEEeeeeEEEeeeccc---------cccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455677 9999999999999999999999999999999987543 34689999999999999999999999
Q ss_pred HhhcCCchhHHHHHHHHHHHHHHHHHHHH-----hhccccccccCccccccccccchHHHHHHHHHH---Hhhhhhhhhh
Q 026565 85 LMKKNNDSLYWQNVQLYTFGAIFNMFRLL-----LDDFRGGFEKGPWWQRLFDGYNITTWMVVFNLG---STGLLVSWLM 156 (237)
Q Consensus 85 ~~K~~~~~~~~~n~~L~~~~~~~~~~~~~-----~~~~~~~~~~g~~~~~~~~g~~~~~~~~il~~a---~~Gl~va~vl 156 (237)
++++++.++. +++++.+-.++.++..+ ..+.... . + + ....|+...+..+++.. ...+..-.++
T Consensus 185 ll~~~~~~~~--~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~-~-~-~---~~~~~~~~~~~~~~~sv~~f~~Nls~f~~i 256 (316)
T KOG1441|consen 185 LLTSKGESLN--SMNLLYYTAPISLIFLLIPFLDYVEGNKF-V-G-F---LTAPWFVTFLILLLNSVLAFLLNLSAFLVI 256 (316)
T ss_pred hhhccccccC--chHHHHHhhhHHHHHHhcchHhhhcccce-e-e-e---eccccchhhHHHHHHHHHHHHHHHHHHHHH
Confidence 9976554443 55554444444444332 1111111 0 0 0 11122222222222221 1134455666
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHhHhccCCCCCC
Q 026565 157 KYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAPPGML 212 (237)
Q Consensus 157 k~~d~i~k~~a~s~siv~s~lls~~~f~~~~t~~~~vG~~lV~~s~~lY~~~~~~~ 212 (237)
.+..+++-.++..+..++.++.|+++|++|.|+....|..+.+.|+++|+....+.
T Consensus 257 g~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~~k~~~ 312 (316)
T KOG1441|consen 257 GRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSRAKLKE 312 (316)
T ss_pred cccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHHHhhhh
Confidence 77778888888888888999999999999999999999999999999999865543
No 20
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=99.20 E-value=1.9e-09 Score=94.68 Aligned_cols=178 Identities=13% Similarity=-0.006 Sum_probs=111.9
Q ss_pred ChhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhhcccCCCccccCcccccchhHHHHHHHHHHHHHHHHHHHHHHhh
Q 026565 8 TRPFHFSLKFSRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGEALCDSLFAAPIQGYLLGVLSACLSALAGVYTEFLMK 87 (237)
Q Consensus 8 ~~p~~~tall~~~~L~~~ls~~qw~al~ll~~Gv~l~~~~~~~~~~~~~~~~~~~~G~~~~l~~a~~sa~a~vy~E~~~K 87 (237)
+.|+ ++++++ +|+.+..+| +.+.++|+.++..++.+. .+....|.+++++++++.++..++.+|..+
T Consensus 106 t~Pi-~~~ll~----~~~~~~~~~--~~i~~~Gv~li~~~~~~~------~~~~~~G~ll~l~aa~~~a~~~v~~r~~~~ 172 (293)
T PRK10532 106 TGPL-AVALFS----SRRPVDFVW--VVLAVLGLWFLLPLGQDV------SHVDLTGAALALGAGACWAIYILSGQRAGA 172 (293)
T ss_pred HHHH-HHHHHh----cCChHHHHH--HHHHHHHHheeeecCCCc------ccCChHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 4455 555544 355555555 456688988765332211 122457999999999999999999998876
Q ss_pred cCCchhHHHHHHHHHHHHHHHHHHHHhhccccccccCccccccccccchHHHHHHHHHHHhhhhhhhhhhhhhHHHHHHH
Q 026565 88 KNNDSLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNITTWMVVFNLGSTGLLVSWLMKYADNIIKVYS 167 (237)
Q Consensus 88 ~~~~~~~~~n~~L~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~il~~a~~Gl~va~vlk~~d~i~k~~a 167 (237)
+++ +.. ...+. .++.+.........+.. ... -...+....+..++...++..+....+|+.++..-+..
T Consensus 173 ~~~-~~~-~~~~~-~~~~~~l~~~~~~~~~~---~~~-----~~~~~~~~l~lgv~~t~~~~~l~~~~~~~~~a~~as~~ 241 (293)
T PRK10532 173 EHG-PAT-VAIGS-LIAALIFVPIGALQAGE---ALW-----HWSILPLGLAVAILSTALPYSLEMIALTRLPTRTFGTL 241 (293)
T ss_pred cCC-chH-HHHHH-HHHHHHHHHHHHHccCc---ccC-----CHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHH
Confidence 654 222 12222 23322222222221110 000 00011111233334444444555566788888888999
Q ss_pred HHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHhHhccCCC
Q 026565 168 TSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAPP 209 (237)
Q Consensus 168 ~s~siv~s~lls~~~f~~~~t~~~~vG~~lV~~s~~lY~~~~ 209 (237)
..+.++++.++++++|||+++...++|.++|+.|+..++...
T Consensus 242 ~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~~ 283 (293)
T PRK10532 242 MSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLTI 283 (293)
T ss_pred HHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhcC
Confidence 999999999999999999999999999999999999997654
No 21
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=99.08 E-value=2.8e-09 Score=91.55 Aligned_cols=193 Identities=21% Similarity=0.248 Sum_probs=122.2
Q ss_pred HHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhhcccCCCccc-cCcccccchhHHHHHHHHHHHHHHHHHHHHHHhhcCCc
Q 026565 13 FSLKFSRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGEAL-CDSLFAAPIQGYLLGVLSACLSALAGVYTEFLMKKNND 91 (237)
Q Consensus 13 ~tall~~~~L~~~ls~~qw~al~ll~~Gv~l~~~~~~~~~~-~~~~~~~~~~G~~~~l~~a~~sa~a~vy~E~~~K~~~~ 91 (237)
|+++|+..+|+|+++.+||+++....+|++++...+...++ +-+..++.+.|.++.+.+.+.-|.--++-||.+|+++.
T Consensus 125 Fvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~d~~~~~~p~~d~s~iitGdllIiiaqiivaiQ~v~Eek~l~~~nV 204 (372)
T KOG3912|consen 125 FVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSLDVHLVTDPYTDYSSIITGDLLIIIAQIIVAIQMVCEEKQLKKSNV 204 (372)
T ss_pred hhHHHHHHHHhcccchhhHHHHHHHHhhhheeeeeecccccCCccccccchhhhHHHHHHHHHHHHHHHHHHhhhhhccC
Confidence 99999999999999999999999999999999876543221 11123567899999999999999999999999999875
Q ss_pred hhHHHHHHH-HHHHH-HHHHHHH---Hhhcccccc--ccCccccccccccchHHHHHHHHHHHhhhhhh---------hh
Q 026565 92 SLYWQNVQL-YTFGA-IFNMFRL---LLDDFRGGF--EKGPWWQRLFDGYNITTWMVVFNLGSTGLLVS---------WL 155 (237)
Q Consensus 92 ~~~~~n~~L-~~~~~-~~~~~~~---~~~~~~~~~--~~g~~~~~~~~g~~~~~~~~il~~a~~Gl~va---------~v 155 (237)
+-- |.+-. ..+|. .++++.. +....+... ..|. +.+..+-|....--..+..+..|..++ .+
T Consensus 205 ~pl-~avg~eGlfG~v~~slL~i~m~yi~~~~sfS~~~~g~-~eD~~~~~~~~~e~p~l~val~~~~vSiAffNfaGlsi 282 (372)
T KOG3912|consen 205 APL-QAVGWEGLFGLVILSLLAIPMYYIPSGDSFSCNPRGV-LEDWGDAFAALQESPSLAVALIGFTVSIAFFNFAGLSI 282 (372)
T ss_pred CHH-HHhhhhhhHHHHHHHHHHHHHhheecCCcCcCCCCcc-hhhHHHHHHHhcCCchhHHHHhhhhhheeeeeehhhHH
Confidence 311 22211 24553 2233222 111111111 1110 111122121100000011122333333 23
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHhHhccC
Q 026565 156 MKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFA 207 (237)
Q Consensus 156 lk~~d~i~k~~a~s~siv~s~lls~~~f~~~~t~~~~vG~~lV~~s~~lY~~ 207 (237)
.|+.++-.+....++-....=+++...+.|.+....++|..+.+.|+++|+.
T Consensus 283 tk~~SattRmllD~lRt~~IWv~si~m~~E~f~llqilGFliLi~Gi~lY~~ 334 (372)
T KOG3912|consen 283 TKELSATTRMLLDSLRTYVIWVFSIAMGWEYFHLLQILGFLILIMGIILYNQ 334 (372)
T ss_pred HHHhhHHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4666666666666666666677777888899999999999999999999986
No 22
>KOG2766 consensus Predicted membrane protein [Function unknown]
Probab=99.03 E-value=3.1e-11 Score=102.28 Aligned_cols=185 Identities=18% Similarity=0.203 Sum_probs=135.3
Q ss_pred HHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhhcccCCCccccCcccccchhHHHHHHHHHHHHHHHHHHHHHHhhcCCch
Q 026565 13 FSLKFSRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGEALCDSLFAAPIQGYLLGVLSACLSALAGVYTEFLMKKNNDS 92 (237)
Q Consensus 13 ~tall~~~~L~~~ls~~qw~al~ll~~Gv~l~~~~~~~~~~~~~~~~~~~~G~~~~l~~a~~sa~a~vy~E~~~K~~~~~ 92 (237)
...+++|++||-|+.+.|+.+++.+.+|+.++..++.+.. ...+..+|..|..+++.+|.++|.+++..|...|+-+.-
T Consensus 117 ~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV~sDV~ag-d~aggsnp~~GD~lvi~GATlYaVSNv~EEflvkn~d~~ 195 (336)
T KOG2766|consen 117 CVLVLSWFFLKTRYRLMKISGVVICIVGVVMVVFSDVHAG-DRAGGSNPVKGDFLVIAGATLYAVSNVSEEFLVKNADRV 195 (336)
T ss_pred HHHHHHHHHHHHHHhhheeeeEEeEecceEEEEEeeeccc-cccCCCCCccCcEEEEecceeeeeccccHHHHHhcCcHH
Confidence 4678999999999999999999999999999998887652 123457899999999999999999999999999987532
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhccccccccCccccccccccchHHHHH---HHHHHHhhhhhhhhhhhhhHHHHHHHHH
Q 026565 93 LYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNITTWMV---VFNLGSTGLLVSWLMKYADNIIKVYSTS 169 (237)
Q Consensus 93 ~~~~n~~L~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~---il~~a~~Gl~va~vlk~~d~i~k~~a~s 169 (237)
.-.-++.++|.+++.+....+ ..+... ..|++..... .+...+-.-+...++|..++-.-+...-
T Consensus 196 --elm~~lgLfGaIIsaIQ~i~~-~~~~~t---------l~w~~~i~~yl~f~L~MFllYsl~pil~k~~~aT~~nlslL 263 (336)
T KOG2766|consen 196 --ELMGFLGLFGAIISAIQFIFE-RHHVST---------LHWDSAIFLYLRFALTMFLLYSLAPILIKTNSATMFNLSLL 263 (336)
T ss_pred --HHHHHHHHHHHHHHHHHHhhh-ccceee---------EeehHHHHHHHHHHHHHHHHHHhhHHheecCCceEEEhhHh
Confidence 223477789999999884433 222211 0122211111 1122222445556667666666666777
Q ss_pred HHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHhHhccCCCCCC
Q 026565 170 MAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAPPGML 212 (237)
Q Consensus 170 ~siv~s~lls~~~f~~~~t~~~~vG~~lV~~s~~lY~~~~~~~ 212 (237)
.+-.++.++ ..||-+.+|.+++..+.+..|.++|+...+.+
T Consensus 264 TsDmwsl~i--~~FgYhv~wLY~laF~~i~~GliiYs~re~~~ 304 (336)
T KOG2766|consen 264 TSDMWSLLI--RTFGYHVDWLYFLAFATIATGLIIYSTREKDE 304 (336)
T ss_pred HHHHHHHHH--HHHhcchhhhhHHHHHHHHHhhEEeeccccCc
Confidence 778888888 67888899999999999999999997655543
No 23
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=99.03 E-value=1.3e-08 Score=80.35 Aligned_cols=141 Identities=21% Similarity=0.225 Sum_probs=94.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcC---CchhHHHHHHHH--HHHHHHHHHHHHhhccccccccCcccccccc-cc--c
Q 026565 64 GYLLGVLSACLSALAGVYTEFLMKKN---NDSLYWQNVQLY--TFGAIFNMFRLLLDDFRGGFEKGPWWQRLFD-GY--N 135 (237)
Q Consensus 64 G~~~~l~~a~~sa~a~vy~E~~~K~~---~~~~~~~n~~L~--~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-g~--~ 135 (237)
|+.+++.+++++++..++.|+.+|+. +.....-++++| ..+.++.++.....|.....+.. ..... .. .
T Consensus 1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~---~~~~~~~~~~~ 77 (153)
T PF03151_consen 1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFF---SEIFGEELSSD 77 (153)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHH---HHhhhhhhcch
Confidence 67899999999999999999999984 112222234333 45555555544444433221110 00111 01 1
Q ss_pred hHHHHHHHHHHH----hhhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHhHhccC
Q 026565 136 ITTWMVVFNLGS----TGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFA 207 (237)
Q Consensus 136 ~~~~~~il~~a~----~Gl~va~vlk~~d~i~k~~a~s~siv~s~lls~~~f~~~~t~~~~vG~~lV~~s~~lY~~ 207 (237)
+..+..++..++ ..+..-.++|+.+++..+....+..++.+++|+++|||++|...++|..+.+.|.++|+.
T Consensus 78 ~~~~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ysy 153 (153)
T PF03151_consen 78 PNFIFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYSY 153 (153)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheeeC
Confidence 122222222222 234444777999999999999999999999999999999999999999999999999973
No 24
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.00 E-value=5.6e-09 Score=89.41 Aligned_cols=203 Identities=18% Similarity=0.196 Sum_probs=125.4
Q ss_pred HHHHHHHHhcCCCCHHHHHHHHHHHHHHhhhcccCCCccccCcccccchhHHHHHHHHHHHHHHHHHHHHHHhhcCCchh
Q 026565 14 SLKFSRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGEALCDSLFAAPIQGYLLGVLSACLSALAGVYTEFLMKKNNDSL 93 (237)
Q Consensus 14 tall~~~~L~~~ls~~qw~al~ll~~Gv~l~~~~~~~~~~~~~~~~~~~~G~~~~l~~a~~sa~a~vy~E~~~K~~~~~~ 93 (237)
+++-+.++-++|+.+..+.|-.++..|+++..+.|.+.+ ......|+.+.-.+-+.-|+-|=.+||.+|.++.+-
T Consensus 146 VmiggifIqGkRY~v~d~~aA~lm~lGli~FTLADs~~s-----PNF~~~Gv~mIsgALl~DA~iGNvQEk~m~~~~~ss 220 (367)
T KOG1582|consen 146 VMIGGIFIQGKRYGVHDYIAAMLMSLGLIWFTLADSQTS-----PNFNLIGVMMISGALLADAVIGNVQEKAMKMNPASS 220 (367)
T ss_pred hhheeeeeccccccHHHHHHHHHHHHHHHhhhhcccccC-----CCcceeeHHHHHHHHHHHHHhhHHHHHHHhhCCCCc
Confidence 467778889999999999999999999999998876543 234577887666666677888888999999876542
Q ss_pred HHHHHHH-HHHHHHHHHHHHHhhccccccccCccccccccccc-----hH-HHHHHHHHHHh-hhhhhhhh---hhhhHH
Q 026565 94 YWQNVQL-YTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYN-----IT-TWMVVFNLGST-GLLVSWLM---KYADNI 162 (237)
Q Consensus 94 ~~~n~~L-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~-----~~-~~~~il~~a~~-Gl~va~vl---k~~d~i 162 (237)
.+.+++ |..|.++.+....+.+ ++|.+|+ ++ ++...+.-++. .+-+..|+ |..++.
T Consensus 221 -~EmvfySy~iG~vflf~~mvlTg------------e~f~a~~fcaehp~~tyGy~~~~s~~gylG~~~VLalI~~fGA~ 287 (367)
T KOG1582|consen 221 -SEMVFYSYGIGFVFLFAPMVLTG------------ELFSAWTFCAEHPVRTYGYAFLFSLAGYLGIVFVLALIKLFGAL 287 (367)
T ss_pred -ceEEEeeecccHHHHHHHHHhcc------------cchhhhHHHHhCcHhHHHHHHHHHHHhHhhHHHHHHHHHHhchh
Confidence 122222 2445555544443321 1222222 12 34333333332 23333333 333333
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHhHhccCCC--CCC-CCCC--CcCcCCCchhhhhhhhhc
Q 026565 163 IKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAPP--GML-VDIP--STAKAAPDSLREVSVERR 234 (237)
Q Consensus 163 ~k~~a~s~siv~s~lls~~~f~~~~t~~~~vG~~lV~~s~~lY~~~~--~~~-~~~~--~~~~~~~~~~~~~~~~~~ 234 (237)
..+..++.-=-+++++|.++|..|+|.++.-|..+|+.|+|+-..+. +.+ .+++ ..+.++.+..+|+++||+
T Consensus 288 ~aatvTTaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln~ysk~nk~~~~~~~~r~~~~~~g~~~~~~~r~~~ 364 (367)
T KOG1582|consen 288 IAATVTTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLNMYSKRNKIPLASLIRRIVARAAGKVDRSVDRKDP 364 (367)
T ss_pred HHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhhcccCCCCCchhhHHhhhhhhhccccccccccccc
Confidence 33333333235799999999999999999999999999999754432 211 2221 222333455666666665
No 25
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=98.79 E-value=9.8e-07 Score=76.48 Aligned_cols=172 Identities=21% Similarity=0.211 Sum_probs=110.7
Q ss_pred hHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhhcccCCCccccCcccccchhHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 026565 10 PFHFSLKFSRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGEALCDSLFAAPIQGYLLGVLSACLSALAGVYTEFLMKKN 89 (237)
Q Consensus 10 p~~~tall~~~~L~~~ls~~qw~al~ll~~Gv~l~~~~~~~~~~~~~~~~~~~~G~~~~l~~a~~sa~a~vy~E~~~K~~ 89 (237)
|+ +..+++.+++|||+|+.||+|+++.++||..-.+... +-|+..+ .-|+..++=+.. +|..|-+
T Consensus 109 PL-~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~g---------~lpwval----~la~sf~~Ygl~-RK~~~v~ 173 (293)
T COG2962 109 PL-VNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLLG---------SLPWVAL----ALALSFGLYGLL-RKKLKVD 173 (293)
T ss_pred HH-HHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHcC---------CCcHHHH----HHHHHHHHHHHH-HHhcCCc
Confidence 66 8999999999999999999999999999988765432 2355433 334455555554 4544443
Q ss_pred C-chhHHHHHHHHHHHHHHHHHHHH-hhccccccccCccccccccccchHHHHHHHHHHHhhhhhhh---hhhhhhHHHH
Q 026565 90 N-DSLYWQNVQLYTFGAIFNMFRLL-LDDFRGGFEKGPWWQRLFDGYNITTWMVVFNLGSTGLLVSW---LMKYADNIIK 164 (237)
Q Consensus 90 ~-~~~~~~n~~L~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~g~~~~~~~~il~~a~~Gl~va~---vlk~~d~i~k 164 (237)
. .++-.+.+.+...+ ++..+ .+|..+. ..++-+...+++++...++.+.... --|+..=.+-
T Consensus 174 a~~g~~lE~l~l~p~a----l~yl~~l~~~~~~---------~~~~~~~~~~LLv~aG~vTavpL~lf~~aa~~lpls~~ 240 (293)
T COG2962 174 ALTGLTLETLLLLPVA----LIYLLFLADSGQF---------LQQNANSLWLLLVLAGLVTAVPLLLFAAAAKRLPLSTL 240 (293)
T ss_pred hHHhHHHHHHHHhHHH----HHHHHHHhcCchh---------hhcCCchHHHHHHHhhHHHHHHHHHHHHHHhcCCHHHH
Confidence 2 24555555554333 22222 2222110 1101122233444443333332222 2255555667
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHhHhccCCC
Q 026565 165 VYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAPP 209 (237)
Q Consensus 165 ~~a~s~siv~s~lls~~~f~~~~t~~~~vG~~lV~~s~~lY~~~~ 209 (237)
++.....+..-.++++++||||++...++..+.+-.|..+|+.+.
T Consensus 241 G~lqYi~Ptl~fllav~i~~E~~~~~~~~~F~~IW~aL~l~~~d~ 285 (293)
T COG2962 241 GFLQYIEPTLMFLLAVLIFGEPFDSDQLVTFAFIWLALALFSIDG 285 (293)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 889999999999999999999999999999999999999998753
No 26
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=98.78 E-value=7e-08 Score=85.96 Aligned_cols=186 Identities=21% Similarity=0.275 Sum_probs=121.4
Q ss_pred HHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhhcccCCCccccCcccccchhHHHHHHHHHHHHHHHHHHHHHHhhcCCch
Q 026565 13 FSLKFSRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGEALCDSLFAAPIQGYLLGVLSACLSALAGVYTEFLMKKNNDS 92 (237)
Q Consensus 13 ~tall~~~~L~~~ls~~qw~al~ll~~Gv~l~~~~~~~~~~~~~~~~~~~~G~~~~l~~a~~sa~a~vy~E~~~K~~~~~ 92 (237)
||-.++.++..+|+|..+.+++.+-++|++++..++.++. .+....+++.|.++++++|+++|.-.+..+|-..+++..
T Consensus 198 FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~~-~~~~a~~~llG~llaL~sA~~YavY~vllk~~~~~eg~r 276 (416)
T KOG2765|consen 198 FTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQN-SDLPASRPLLGNLLALLSALLYAVYTVLLKRKIGDEGER 276 (416)
T ss_pred HHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEecccccc-ccCCccchhHHHHHHHHHHHHHHHHHHHHHhhccccccc
Confidence 8999999999999999999999999999999998766442 122346689999999999999988888777765555322
Q ss_pred hHHHHHHHHHHHHHHHHHHHH----hhccccccccCccccccccccch-HHHHHHHHHHHhhhhhhhhh-----hhhhHH
Q 026565 93 LYWQNVQLYTFGAIFNMFRLL----LDDFRGGFEKGPWWQRLFDGYNI-TTWMVVFNLGSTGLLVSWLM-----KYADNI 162 (237)
Q Consensus 93 ~~~~n~~L~~~~~~~~~~~~~----~~~~~~~~~~g~~~~~~~~g~~~-~~~~~il~~a~~Gl~va~vl-----k~~d~i 162 (237)
.-+ ++++.+.| +++++..+ +-+.-... -|.--+. ..-.+++.+ +.|..++=.+ -..+..
T Consensus 277 vdi-~lffGfvG-LfnllllwP~l~iL~~~~~e--------~F~lP~~~q~~~vv~~~-ligtvvSDylW~~a~~lTs~L 345 (416)
T KOG2765|consen 277 VDI-QLFFGFVG-LFNLLLLWPPLIILDFFGEE--------RFELPSSTQFSLVVFNN-LIGTVVSDYLWAKAVLLTSPL 345 (416)
T ss_pred ccH-HHHHHHHH-HHHHHHHhHHHHHHHHhccC--------cccCCCCceeEeeeHhh-HHHHHHHHHHHHHHHHhccch
Confidence 222 22332333 33433221 11111000 0000011 111222222 3333333111 112455
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHhHhccCCCC
Q 026565 163 IKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAPPG 210 (237)
Q Consensus 163 ~k~~a~s~siv~s~lls~~~f~~~~t~~~~vG~~lV~~s~~lY~~~~~ 210 (237)
+.+.+.+++|.++.+...++=+.++|+.+++|+..|++|-++-+.+.+
T Consensus 346 v~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~vn~~~~ 393 (416)
T KOG2765|consen 346 VVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVIVNISSE 393 (416)
T ss_pred hheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhheecccc
Confidence 566677777899999999999999999999999999999998887644
No 27
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=98.71 E-value=9.3e-07 Score=75.95 Aligned_cols=151 Identities=15% Similarity=0.158 Sum_probs=91.9
Q ss_pred ChhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhhcccCCCccccCcccccchhHHHHHHHHHHHHHHHHHHHHHHhh
Q 026565 8 TRPFHFSLKFSRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGEALCDSLFAAPIQGYLLGVLSACLSALAGVYTEFLMK 87 (237)
Q Consensus 8 ~~p~~~tall~~~~L~~~ls~~qw~al~ll~~Gv~l~~~~~~~~~~~~~~~~~~~~G~~~~l~~a~~sa~a~vy~E~~~K 87 (237)
+.|+ ++++++++++|||++++||.++++.++|+.++..++. +.. .+++++++++++..++.+|.-+
T Consensus 105 ~~Pi-~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~~~~~---------~~~----~~~l~aa~~~a~~~i~~~~~~~ 170 (256)
T TIGR00688 105 INPL-VMVALGRVFLKERISRFQFIAVIIATLGVISNIVLKG---------SLP----WEALVLAFSFTAYGLIRKALKN 170 (256)
T ss_pred HHHH-HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHcC---------Cch----HHHHHHHHHHHHHHHHHhhcCC
Confidence 4677 9999999999999999999999999999988753311 111 2467788999999999888643
Q ss_pred cCCchhHHHHHHHHHHHHHHHHHHHHhhccccccccCccccccccccchHHHHHHHHHHHhhhhhhhhhhhhhHHHHHHH
Q 026565 88 KNNDSLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNITTWMVVFNLGSTGLLVSWLMKYADNIIKVYS 167 (237)
Q Consensus 88 ~~~~~~~~~n~~L~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~il~~a~~Gl~va~vlk~~d~i~k~~a 167 (237)
++. .+...-+....++........++..... .+....|.... .......++..+....+||.++-.-+..
T Consensus 171 ~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~-~~g~~t~i~~~l~~~a~~~~~a~~~s~~ 240 (256)
T TIGR00688 171 TDL----AGFCLETLSLMPVAIYYLLQTDFATVQQ-----TNPFPIWLLLV-LAGLITGTPLLAFVIAANRLPLNLLGLL 240 (256)
T ss_pred CCc----chHHHHHHHHHHHHHHHHHHhccCcccc-----cCchhHHHHHH-HHHHHHHHHHHHHHHHHHcCChHHHHHH
Confidence 221 1111111222222222111112111000 00000121111 1122244455666677899999999999
Q ss_pred HHHHHHHHHHHHHHH
Q 026565 168 TSMAMLLTMVLSVYL 182 (237)
Q Consensus 168 ~s~siv~s~lls~~~ 182 (237)
..+.++++.++++++
T Consensus 241 ~yl~Pv~~~~~~~~~ 255 (256)
T TIGR00688 241 QYIGPTIMMLCVSFL 255 (256)
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999998764
No 28
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=98.71 E-value=8.4e-07 Score=78.05 Aligned_cols=173 Identities=14% Similarity=0.164 Sum_probs=109.7
Q ss_pred HHHHHHHHHhcCCCCHHH----HHHHHHHHHHHhhhcccCCCccccCcccccchhHHHHHHHHHHHHHHHHHHHHHHhhc
Q 026565 13 FSLKFSRLFLRRRLSTLQ----WMAIVLLAVGTTTSQVKGCGEALCDSLFAAPIQGYLLGVLSACLSALAGVYTEFLMKK 88 (237)
Q Consensus 13 ~tall~~~~L~~~ls~~q----w~al~ll~~Gv~l~~~~~~~~~~~~~~~~~~~~G~~~~l~~a~~sa~a~vy~E~~~K~ 88 (237)
+.++++.+++||+.++++ +.++++.++|+.++..++.++.+ ++...+...|+.+.+++++..++..+..++. +
T Consensus 99 ~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~~~~~~~-~~~~~~~~~Gi~~~l~sg~~y~~~~~~~~~~-~- 175 (290)
T TIGR00776 99 GGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSRSKDKSAG-IKSEFNFKKGILLLLMSTIGYLVYVVVAKAF-G- 175 (290)
T ss_pred HHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEeccccccc-cccccchhhHHHHHHHHHHHHHHHHHHHHHc-C-
Confidence 778899999999999999 99999999999988755422211 0100223569999999999999999998875 2
Q ss_pred CCchhHH---HHHHHHHHHHHHHHHHHHhhccccccccCccccccccccchHHHHHHHHH---HHhhhhhhhhhh-hhhH
Q 026565 89 NNDSLYW---QNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNITTWMVVFNL---GSTGLLVSWLMK-YADN 161 (237)
Q Consensus 89 ~~~~~~~---~n~~L~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~il~~---a~~Gl~va~vlk-~~d~ 161 (237)
++ +... |..-+...+++++... . + +.| . . +...+..++.. .++..+-..-.+ +.+.
T Consensus 176 ~~-~~~~~~~~~~g~~~~~~~~~~~~--~-~------~~~----~-~--~~~~~~~~~~Gi~~~ia~~~y~~~~~~~~~~ 238 (290)
T TIGR00776 176 VD-GLSVLLPQAIGMVIGGIIFNLGH--I-L------AKP----L-K--KYAILLNILPGLMWGIGNFFYLFSAQPKVGV 238 (290)
T ss_pred CC-cceehhHHHHHHHHHHHHHHHHH--h-c------ccc----h-H--HHHHHHHHHHHHHHHHHHHHHHHHcccccch
Confidence 32 2222 3333333444333322 0 0 010 1 0 11112111111 111211112224 5555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCccHHHH----HHHHHHHHHhHhc
Q 026565 162 IIKVYSTSMAMLLTMVLSVYLFNFKPTLQLF----LGIIICMMSLHMY 205 (237)
Q Consensus 162 i~k~~a~s~siv~s~lls~~~f~~~~t~~~~----vG~~lV~~s~~lY 205 (237)
.....-++..++.+.+.++++|||+.+...+ +|.++++.|+.+-
T Consensus 239 ~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~ 286 (290)
T TIGR00776 239 ATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANIL 286 (290)
T ss_pred hhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHH
Confidence 6666677788999999999999999999999 9999999998764
No 29
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=98.64 E-value=2.5e-07 Score=79.29 Aligned_cols=186 Identities=12% Similarity=0.160 Sum_probs=109.8
Q ss_pred CCChhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhhcccCCC--cc-ccCc--ccccchhHHHHHHHHHHHHHHHHH
Q 026565 6 MITRPFHFSLKFSRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCG--EA-LCDS--LFAAPIQGYLLGVLSACLSALAGV 80 (237)
Q Consensus 6 ~i~~p~~~tall~~~~L~~~ls~~qw~al~ll~~Gv~l~~~~~~~--~~-~~~~--~~~~~~~G~~~~l~~a~~sa~a~v 80 (237)
--+.|. ||.+|++++||||+|...-+...+-..||+++..++.- ++ ..++ .-+...+|...++.+++..+--=+
T Consensus 130 tFssPv-ft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPpFlFG~~t~g~~~s~~~~~~~gt~aai~s~lf~asvyI 208 (346)
T KOG4510|consen 130 TFSSPV-FTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPPFLFGDTTEGEDSSQVEYDIPGTVAAISSVLFGASVYI 208 (346)
T ss_pred EecChH-HHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCCcccCCCccccccccccccCCchHHHHHhHhhhhhHHH
Confidence 346677 99999999999999999999999999999999887641 11 1111 113346677777777666544444
Q ss_pred HHHHHhhcCCchhHHHHHHH-HHHHHHHHHHHHH-hhccccccccCc-cccccccccchHHHHHHHHHHHhhhhhhhhhh
Q 026565 81 YTEFLMKKNNDSLYWQNVQL-YTFGAIFNMFRLL-LDDFRGGFEKGP-WWQRLFDGYNITTWMVVFNLGSTGLLVSWLMK 157 (237)
Q Consensus 81 y~E~~~K~~~~~~~~~n~~L-~~~~~~~~~~~~~-~~~~~~~~~~g~-~~~~~~~g~~~~~~~~il~~a~~Gl~va~vlk 157 (237)
..+++-|+-+... .+.+ ...+++.+++... +.+++. +..|. |+.-.+.|. ...+++++.+.-+.
T Consensus 209 ilR~iGk~~h~~m---svsyf~~i~lV~s~I~~~~ig~~~l-P~cgkdr~l~~~lGv---------fgfigQIllTm~lQ 275 (346)
T KOG4510|consen 209 ILRYIGKNAHAIM---SVSYFSLITLVVSLIGCASIGAVQL-PHCGKDRWLFVNLGV---------FGFIGQILLTMGLQ 275 (346)
T ss_pred HHHHhhccccEEE---EehHHHHHHHHHHHHHHhhccceec-CccccceEEEEEehh---------hhhHHHHHHHHHhh
Confidence 4455545543211 1222 1233344444322 222221 11121 111111111 12223444443332
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHhHhc
Q 026565 158 YADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMY 205 (237)
Q Consensus 158 ~~d~i~k~~a~s~siv~s~lls~~~f~~~~t~~~~vG~~lV~~s~~lY 205 (237)
.=.+---+..++.-++++.+..+++|||.||++.++|+.+|+.|+..-
T Consensus 276 iErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v~~ 323 (346)
T KOG4510|consen 276 IERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTVWV 323 (346)
T ss_pred hhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhHHHH
Confidence 111122256777888999999999999999999999999999887644
No 30
>KOG1443 consensus Predicted integral membrane protein [Function unknown]
Probab=98.61 E-value=1.1e-06 Score=76.49 Aligned_cols=187 Identities=20% Similarity=0.266 Sum_probs=117.6
Q ss_pred ChhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhhcccCCCccccCcccccchhHHHHHHHHHHHHHHHHHHHHHHhh
Q 026565 8 TRPFHFSLKFSRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGEALCDSLFAAPIQGYLLGVLSACLSALAGVYTEFLMK 87 (237)
Q Consensus 8 ~~p~~~tall~~~~L~~~ls~~qw~al~ll~~Gv~l~~~~~~~~~~~~~~~~~~~~G~~~~l~~a~~sa~a~vy~E~~~K 87 (237)
|.++ |.-+|+.++==|+.++.-...++++.+|+.+..+++. +..+.|+.+++.+++++|+...+.+++++
T Consensus 119 Ssi~-FIllFs~if~lEk~~w~L~l~v~lI~~Glflft~KsT---------qf~i~Gf~lv~~aS~~sGlRW~~tQ~ll~ 188 (349)
T KOG1443|consen 119 SSIL-FILLFSLIFKLEKFRWALVLIVLLIAVGLFLFTYKST---------QFNIEGFFLVLAASLLSGLRWAFTQMLLR 188 (349)
T ss_pred cHHH-HHHHHHHHHHhHHHHHHHHHHHHHHhhheeEEEeccc---------ceeehhHHHHHHHHHhhhhhHHHHHHHHh
Confidence 3444 8889999998899999999999999999999998775 34578999999999999999999999998
Q ss_pred cCCchhHHHH-----HHHHHHHHHHHHHHHHhhccccccccCccccccccccchHHHHHHHHHHHhhhhhhhhhhhhhHH
Q 026565 88 KNNDSLYWQN-----VQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNITTWMVVFNLGSTGLLVSWLMKYADNI 162 (237)
Q Consensus 88 ~~~~~~~~~n-----~~L~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~il~~a~~Gl~va~vlk~~d~i 162 (237)
+++. +.+| .++..+-.+..++..+..|+.......+ ...+++.+. .+-.+..-+.+| ..++++-...-.
T Consensus 189 ~~~~--~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~~s~-~f~~~d~~~--~~rv~g~i~l~g-~laF~l~~sEfl 262 (349)
T KOG1443|consen 189 NQPS--AKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLITSSS-IFRFQDTGL--ILRVIGLISLGG-LLAFLLEFSEFL 262 (349)
T ss_pred cCcc--ccCCCeeeHHHhhhHHHHHHHHHHHHHcccccchhhh-HHHhcCccH--HHHHHHHHHHHH-HHHHHHHHHHHh
Confidence 8751 1111 1222111112222222223222111000 011222222 222222223334 334444333333
Q ss_pred HHH--------HHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHhHhccCCCC
Q 026565 163 IKV--------YSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAPPG 210 (237)
Q Consensus 163 ~k~--------~a~s~siv~s~lls~~~f~~~~t~~~~vG~~lV~~s~~lY~~~~~ 210 (237)
++. .+--+.-+.+.+++....+++++...++|..++..++..|...|.
T Consensus 263 Ll~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi~~~~~~~~ 318 (349)
T KOG1443|consen 263 LLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAICLAGILLHRNEPQ 318 (349)
T ss_pred eeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHhccCcc
Confidence 322 222233468999999999999999999999999999999955433
No 31
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=98.53 E-value=4.5e-08 Score=83.98 Aligned_cols=185 Identities=16% Similarity=0.212 Sum_probs=133.7
Q ss_pred HHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhhcccCCCccccCcccccchhHHHHHHHHHHHHHHHHHHHHHHhhcCCch
Q 026565 13 FSLKFSRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGEALCDSLFAAPIQGYLLGVLSACLSALAGVYTEFLMKKNNDS 92 (237)
Q Consensus 13 ~tall~~~~L~~~ls~~qw~al~ll~~Gv~l~~~~~~~~~~~~~~~~~~~~G~~~~l~~a~~sa~a~vy~E~~~K~~~~~ 92 (237)
||.++.+++||+|=+..-..+..+++.|--+=.-++. ....-...|.++.+.+++.-|+-++|.+|.+-.-++.
T Consensus 141 FtVlLtyvllkqkTs~~~~~~C~lIi~GF~lGvdqE~------~~~~ls~~GvifGVlaSl~vAlnaiytkk~l~~v~~~ 214 (347)
T KOG1442|consen 141 FTVLLTYVLLKQKTSFFALGCCLLIILGFGLGVDQEG------STGTLSWIGVIFGVLASLAVALNAIYTKKVLPPVGDC 214 (347)
T ss_pred HHHHhHHhhcccccccccceeehhheehheecccccc------ccCccchhhhHHHHHHHHHHHHHHHhhheecccccCe
Confidence 8999999999999998887776666666543321111 1123456899999999999999999999887766777
Q ss_pred hHHHHHHHHHHHHHHHHHHHHh-hccccccccCccccccccccchHHHHHHHHHHHhhhhhhhh----hhhhhHHHHHHH
Q 026565 93 LYWQNVQLYTFGAIFNMFRLLL-DDFRGGFEKGPWWQRLFDGYNITTWMVVFNLGSTGLLVSWL----MKYADNIIKVYS 167 (237)
Q Consensus 93 ~~~~n~~L~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~~g~~~~~~~~il~~a~~Gl~va~v----lk~~d~i~k~~a 167 (237)
+|.-.+..-.++++..+....+ .|.+.+. ++-+-++...|.+.....+.|..+.++ +|..+.++.+..
T Consensus 215 iw~lt~ynnv~a~lLflpll~lnge~~~v~-------~~~~l~a~~Fw~~mtLsglfgF~mgyvTg~QIK~TSplThnIS 287 (347)
T KOG1442|consen 215 IWRLTAYNNVNALLLFLPLLILNGEFQAVV-------GFPHLPAIKFWILMTLSGLFGFAMGYVTGWQIKVTSPLTHNIS 287 (347)
T ss_pred ehhhHHHHHHHHHHHHHHHHHHcchHHHHc-------CcccchHHHHHHHHHHHHHHHHHhhheeeEEEEecccceeeec
Confidence 8866665556666666554433 3444332 233445666676666655555555444 366677777777
Q ss_pred HHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHhHhccCCCC
Q 026565 168 TSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAPPG 210 (237)
Q Consensus 168 ~s~siv~s~lls~~~f~~~~t~~~~vG~~lV~~s~~lY~~~~~ 210 (237)
.+..-..-.++++.+.+|..+..-+-|-.+|+.|...|++-.+
T Consensus 288 gTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT~vk~ 330 (347)
T KOG1442|consen 288 GTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAYTLVKE 330 (347)
T ss_pred HhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHHHHHHHH
Confidence 7777788888999999999999999999999999999988543
No 32
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=98.45 E-value=4.3e-06 Score=73.35 Aligned_cols=193 Identities=12% Similarity=0.140 Sum_probs=121.3
Q ss_pred cccCCChhHH---------HHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhhcccCCCccccCcccccchhHHHHHHHHHH
Q 026565 3 AISMITRPFH---------FSLKFSRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGEALCDSLFAAPIQGYLLGVLSAC 73 (237)
Q Consensus 3 ~~~~i~~p~~---------~tall~~~~L~~~ls~~qw~al~ll~~Gv~l~~~~~~~~~~~~~~~~~~~~G~~~~l~~a~ 73 (237)
..--+.+|++ .|++....++|+|.+..-|.++.+..+|......++.. ....|+.+++..++
T Consensus 97 slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~~d~s---------f~~~gY~w~~~n~~ 167 (314)
T KOG1444|consen 97 SLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAAFTDLS---------FNLRGYSWALANCL 167 (314)
T ss_pred cccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhccccce---------ecchhHHHHHHHHH
Confidence 3444566666 89999999999999999999999999998887766542 23459999999999
Q ss_pred HHHHHHHHHHHHhhcCCchhHHHHHHHH--HHHHHHHHHHH-HhhccccccccCccccccccccchHHHHHHHHHHHhhh
Q 026565 74 LSALAGVYTEFLMKKNNDSLYWQNVQLY--TFGAIFNMFRL-LLDDFRGGFEKGPWWQRLFDGYNITTWMVVFNLGSTGL 150 (237)
Q Consensus 74 ~sa~a~vy~E~~~K~~~~~~~~~n~~L~--~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~g~~~~~~~~il~~a~~Gl 150 (237)
+.+.-.+|.++..+..+.+.| .+.+| +++++...+.. ..+|+.....+. -.-.....+..+....+.|.
T Consensus 168 ~~a~~~v~~kk~vd~~~l~~~--~lv~yNnl~~L~~l~~~~~~~ge~~~l~~~~------~~~~~~~~~~~~~lScv~gf 239 (314)
T KOG1444|consen 168 TTAAFVVYVKKSVDSANLNKF--GLVFYNNLLSLPPLLILSFITGELDALSLNF------DNWSDSSVLVVMLLSCVMGF 239 (314)
T ss_pred HHHHHHHHHHHhhccccccce--eEEeehhHHHHHHHHHHHHHhcchHHHHhhc------ccccchhHHHHHHHHHHHHH
Confidence 999999999998877653212 11111 33444444433 334444111111 00112334444444444454
Q ss_pred hhhhhh----hhhhHHHHHHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHhHhccCCCCCC
Q 026565 151 LVSWLM----KYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAPPGML 212 (237)
Q Consensus 151 ~va~vl----k~~d~i~k~~a~s~siv~s~lls~~~f~~~~t~~~~vG~~lV~~s~~lY~~~~~~~ 212 (237)
.++++. ++-++..-...-..-...+.+...+++|.+.++.-++|..+-+.|..+|+....++
T Consensus 240 ~isy~s~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y~~~~~~~ 305 (314)
T KOG1444|consen 240 GISYTSFLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLYSYATFRK 305 (314)
T ss_pred HHHHHHHHHHhhccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHHhhhhhhh
Confidence 444333 22222211111122234555666667799999999999999999999998876543
No 33
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=97.98 E-value=0.0002 Score=62.18 Aligned_cols=173 Identities=16% Similarity=0.236 Sum_probs=96.4
Q ss_pred HHHHHHHHHhcCCCCHHHHH----HHHHHHHHHhhhcccCCCccccCcccccchhHHHHHHHHHHHHHHHHHHHHHHhhc
Q 026565 13 FSLKFSRLFLRRRLSTLQWM----AIVLLAVGTTTSQVKGCGEALCDSLFAAPIQGYLLGVLSACLSALAGVYTEFLMKK 88 (237)
Q Consensus 13 ~tall~~~~L~~~ls~~qw~----al~ll~~Gv~l~~~~~~~~~~~~~~~~~~~~G~~~~l~~a~~sa~a~vy~E~~~K~ 88 (237)
.+++++.++++|--+..||. |++++.+|+.+...++.+++..+ ..++...|+..++++++.+-.-.+..+ ..+-
T Consensus 85 g~sl~gv~~fgEW~~~~~~~~G~~Al~liiiGv~lts~~~~~~~~~~-~~~~~~kgi~~Ll~stigy~~Y~~~~~-~~~~ 162 (269)
T PF06800_consen 85 GTSLIGVLFFGEWTTTTQKIIGFLALVLIIIGVILTSYQDKKSDKSS-SKSNMKKGILALLISTIGYWIYSVIPK-AFHV 162 (269)
T ss_pred HHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHhccccccccccc-cccchhhHHHHHHHHHHHHHHHHHHHH-hcCC
Confidence 79999999999999988876 89999999999988775543211 123455688888888887655555433 3322
Q ss_pred CCc-hhHHHHHHHHHHHHHHHHHHHHhhccccccccCccccccccccchH--HHHHHHHHHHhhhhhhhhhhhhhHHHHH
Q 026565 89 NND-SLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNIT--TWMVVFNLGSTGLLVSWLMKYADNIIKV 165 (237)
Q Consensus 89 ~~~-~~~~~n~~L~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~--~~~~il~~a~~Gl~va~vlk~~d~i~k~ 165 (237)
++. -+..|.+=+.+.+++++... .+...++ ..+.+...|.-+. .+..++...-.|..+++
T Consensus 163 ~~~~~~lPqaiGm~i~a~i~~~~~-----~~~~~~k-~~~~nil~G~~w~ignl~~~is~~~~G~a~af----------- 225 (269)
T PF06800_consen 163 SGWSAFLPQAIGMLIGAFIFNLFS-----KKPFFEK-KSWKNILTGLIWGIGNLFYLISAQKNGVATAF----------- 225 (269)
T ss_pred ChhHhHHHHHHHHHHHHHHHhhcc-----ccccccc-chHHhhHHHHHHHHHHHHHHHhHHhccchhhh-----------
Confidence 221 13334333333333333322 1111111 1111223332111 11111111111222222
Q ss_pred HHHHHHHHHHHHHHHHHcCCCccHH----HHHHHHHHHHHhHh
Q 026565 166 YSTSMAMLLTMVLSVYLFNFKPTLQ----LFLGIIICMMSLHM 204 (237)
Q Consensus 166 ~a~s~siv~s~lls~~~f~~~~t~~----~~vG~~lV~~s~~l 204 (237)
.-+.++++++.+-++++|+|+=+.. .++|.+++++|..+
T Consensus 226 ~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~il 268 (269)
T PF06800_consen 226 TLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIGAIL 268 (269)
T ss_pred hHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHhhhc
Confidence 1233668899999999999987644 67888888877653
No 34
>COG2510 Predicted membrane protein [Function unknown]
Probab=97.94 E-value=7.3e-05 Score=57.50 Aligned_cols=125 Identities=16% Similarity=0.331 Sum_probs=71.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCch--hHHHHHHHHHHHHHHHHHHHHh-hccccccccCccccccccccchHHHHH
Q 026565 65 YLLGVLSACLSALAGVYTEFLMKKNNDS--LYWQNVQLYTFGAIFNMFRLLL-DDFRGGFEKGPWWQRLFDGYNITTWMV 141 (237)
Q Consensus 65 ~~~~l~~a~~sa~a~vy~E~~~K~~~~~--~~~~n~~L~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~~g~~~~~~~~ 141 (237)
...+++++++.++..++-+--+|+.|.+ ..+|++....+ .....+. ..++... -....++ .++
T Consensus 5 ~~~ALLsA~fa~L~~iF~KIGl~~vdp~~At~IRtiVi~~~----l~~v~~~~g~~~~~~--------~~~~k~~--lfl 70 (140)
T COG2510 5 IIYALLSALFAGLTPIFAKIGLEGVDPDFATTIRTIVILIF----LLIVLLVTGNWQAGG--------EIGPKSW--LFL 70 (140)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccCccHHHHHHHHHHHHH----HHHHHHhcCceeccc--------ccCccee--hhh
Confidence 3578899999999999855556655433 33444444322 1111111 1222110 1111221 122
Q ss_pred HHHHHHhhhhhhhhhhhhhHHHHHH------HHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHhHhcc
Q 026565 142 VFNLGSTGLLVSWLMKYADNIIKVY------STSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYF 206 (237)
Q Consensus 142 il~~a~~Gl~va~vlk~~d~i~k~~------a~s~siv~s~lls~~~f~~~~t~~~~vG~~lV~~s~~lY~ 206 (237)
++....+|+ +. +-|.-++.++- -...++++.+++|+++++|++|...++|..++.+|..+-+
T Consensus 71 ilSGla~gl--sw-l~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs 138 (140)
T COG2510 71 ILSGLAGGL--SW-LLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVS 138 (140)
T ss_pred hHHHHHHHH--HH-HHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEe
Confidence 233223333 22 22222344443 4457789999999999999999999999999999987654
No 35
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=97.93 E-value=0.0001 Score=60.99 Aligned_cols=179 Identities=14% Similarity=0.207 Sum_probs=109.4
Q ss_pred HHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhhcccCCCccccCcccccchhHHHHHHHHHHHHHHHHHHHHHHhhcCC--
Q 026565 13 FSLKFSRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGEALCDSLFAAPIQGYLLGVLSACLSALAGVYTEFLMKKNN-- 90 (237)
Q Consensus 13 ~tall~~~~L~~~ls~~qw~al~ll~~Gv~l~~~~~~~~~~~~~~~~~~~~G~~~~l~~a~~sa~a~vy~E~~~K~~~-- 90 (237)
|+-+++++.||.|+...+.++.++...|+++..+.+.. ..+.+.|+.+++.+++.+++--|.+++....-+
T Consensus 92 FVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN~-------~a~e~iGi~~AV~SA~~aAlYKV~FK~~iGnAn~G 164 (290)
T KOG4314|consen 92 FVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADNE-------HADEIIGIACAVGSAFMAALYKVLFKMFIGNANFG 164 (290)
T ss_pred HHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccch-------hhhhhhhHHHHHHHHHHHHHHHHHHHHHhccCcch
Confidence 78889999999999999999999999999998865542 245789999999999998888887777765432
Q ss_pred -chhHHHHHHHHHHHHHHHHHHH---HhhccccccccCccccccccccchHHHHHHHHHHHhhhhhhhhhh----hhhHH
Q 026565 91 -DSLYWQNVQLYTFGAIFNMFRL---LLDDFRGGFEKGPWWQRLFDGYNITTWMVVFNLGSTGLLVSWLMK----YADNI 162 (237)
Q Consensus 91 -~~~~~~n~~L~~~~~~~~~~~~---~~~~~~~~~~~g~~~~~~~~g~~~~~~~~il~~a~~Gl~va~vlk----~~d~i 162 (237)
.+.++..+ .++-+++..+.. .....++ ++.|....|.-....+.-.+..-+.++ ....+
T Consensus 165 daa~FmS~L--GF~NL~~~~~~~lIL~~T~VE~-----------~qsFA~~PWG~l~G~A~L~lAFN~~iN~GiaL~~Pi 231 (290)
T KOG4314|consen 165 DAAHFMSCL--GFFNLCFISFPALILAFTGVEH-----------LQSFAAAPWGCLCGAAGLSLAFNFLINFGIALLNPI 231 (290)
T ss_pred hHHHHHHHH--HHHHHHHHhhhHHHHHHhchHH-----------HHHHhhCCchhhhhHHHHHHHHhhheeehhhhhchh
Confidence 12222221 122222222211 1111111 111111112211111110111111111 12345
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHhHhccCCCCC
Q 026565 163 IKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAPPGM 211 (237)
Q Consensus 163 ~k~~a~s~siv~s~lls~~~f~~~~t~~~~vG~~lV~~s~~lY~~~~~~ 211 (237)
+-+...-+++.....+..++-+-..+..++.|.+++.+|-.+--.|..+
T Consensus 232 lISiG~l~~iP~NaaiDiL~q~l~~ntl~La~T~iI~i~FiLiiiP~d~ 280 (290)
T KOG4314|consen 232 LISIGMLCGIPGNAAIDILFQELEFNTLFLAATCIICIGFILIIIPEDK 280 (290)
T ss_pred hheehheecCcchhHHHHHHHHHHHHHHHHHHHHHHHHhHHheecccch
Confidence 5555666667778888888888889999999999999998776655443
No 36
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=97.93 E-value=0.00018 Score=53.82 Aligned_cols=60 Identities=17% Similarity=0.329 Sum_probs=51.5
Q ss_pred HHhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHhHhc
Q 026565 146 GSTGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMY 205 (237)
Q Consensus 146 a~~Gl~va~vlk~~d~i~k~~a~s~siv~s~lls~~~f~~~~t~~~~vG~~lV~~s~~lY 205 (237)
+++..+....+|+.+...-+....+.++++.++++++++|++++..++|..+++.|+++.
T Consensus 65 ~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~ 124 (126)
T PF00892_consen 65 ALAYLLYFYALKYISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLI 124 (126)
T ss_pred ehHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHH
Confidence 444455556678888888888888999999999999999999999999999999998764
No 37
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=97.87 E-value=0.0012 Score=51.22 Aligned_cols=120 Identities=18% Similarity=0.189 Sum_probs=72.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhcCCc-hhHHHHHHHHHHHHHHHHHHHHhhccccccccCccccccccccch--HHH
Q 026565 63 QGYLLGVLSACLSALAGVYTEFLMKKNND-SLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNI--TTW 139 (237)
Q Consensus 63 ~G~~~~l~~a~~sa~a~vy~E~~~K~~~~-~~~~~n~~L~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~--~~~ 139 (237)
.|+++.+.+.++.+.+.+..++-.++.+. +..... +. .. . .. .++ +.+
T Consensus 2 ~~~~~i~~sv~l~~~gQl~~K~g~~~~g~~~~~~~~--~~---~~---~-~~--------------------~~p~~~i~ 52 (129)
T PRK02971 2 MGYLWGLASVLLASVAQLSLKWGMSRLPLLSHAWDF--IA---AL---L-AF--------------------GLALRAVL 52 (129)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHhhCCCccchhHH--HH---HH---H-HH--------------------hccHHHHH
Confidence 36778888888888888887777665432 110000 00 00 0 00 011 233
Q ss_pred HHHHHHHHhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHH--HcCCCccHHHHHHHHHHHHHhHhccCCCCC
Q 026565 140 MVVFNLGSTGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVY--LFNFKPTLQLFLGIIICMMSLHMYFAPPGM 211 (237)
Q Consensus 140 ~~il~~a~~Gl~va~vlk~~d~i~k~~a~s~siv~s~lls~~--~f~~~~t~~~~vG~~lV~~s~~lY~~~~~~ 211 (237)
.-+...++.-.+-...+|+.|-.......+...+...++++. +|||++|+..++|.++++.|+++-+.+.+|
T Consensus 53 lgl~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~~~~ 126 (129)
T PRK02971 53 LGLAGYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLPTTK 126 (129)
T ss_pred HHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccCCCC
Confidence 333333333344455667666655555555555666667764 899999999999999999999998765443
No 38
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=97.64 E-value=0.0015 Score=56.90 Aligned_cols=133 Identities=15% Similarity=0.002 Sum_probs=76.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhccccccccCccccccccccchHHHHHHHH
Q 026565 65 YLLGVLSACLSALAGVYTEFLMKKNNDSLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNITTWMVVFN 144 (237)
Q Consensus 65 ~~~~l~~a~~sa~a~vy~E~~~K~~~~~~~~~n~~L~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~il~ 144 (237)
+.+.+.++++.+...+..+|..+++.. .+ ...+..+.+...........+...+. .-..+-.........
T Consensus 3 ~~~~~~aa~~~a~~~~~~k~~~~~~~~---~~-~~~~~~~~~~l~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~ 72 (281)
T TIGR03340 3 LTLVVFSALMHAGWNLMAKSHADKEPD---FL-WWALLAHSVLLTPYGLWYLAQVGWSR------LPATFWLLLAISAVA 72 (281)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCchhH---HH-HHHHHHHHHHHHHHHHHhcccCCCCC------cchhhHHHHHHHHHH
Confidence 457788999999999998877766432 11 11112222222221111100000000 000000011111122
Q ss_pred HHHhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHhHhccC
Q 026565 145 LGSTGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFA 207 (237)
Q Consensus 145 ~a~~Gl~va~vlk~~d~i~k~~a~s~siv~s~lls~~~f~~~~t~~~~vG~~lV~~s~~lY~~ 207 (237)
++....+....+++.+.-.-+......++++.++++++|+|+++...++|..+++.|+++-..
T Consensus 73 ~~~~~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~ 135 (281)
T TIGR03340 73 NMVYFLGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGL 135 (281)
T ss_pred HHHHHHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhc
Confidence 222333334446777777777777888999999999999999999999999999999876543
No 39
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=97.49 E-value=0.0016 Score=54.94 Aligned_cols=188 Identities=14% Similarity=0.183 Sum_probs=114.0
Q ss_pred HHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhhcccCCCccccCcccccchhHHHHHHHHHHHHHHHHHHHHHHhhcCCch
Q 026565 13 FSLKFSRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGEALCDSLFAAPIQGYLLGVLSACLSALAGVYTEFLMKKNNDS 92 (237)
Q Consensus 13 ~tall~~~~L~~~ls~~qw~al~ll~~Gv~l~~~~~~~~~~~~~~~~~~~~G~~~~l~~a~~sa~a~vy~E~~~K~~~~~ 92 (237)
..|.....++|+|.+.....+.++++.......++|.+...-. .+....|++++..-++.++.--...+|..|-.+..
T Consensus 107 ~iAygEvl~Fgg~vtsl~l~SFilMvlSS~va~w~D~q~~~~~--~~~lN~GY~Wm~~NclssaafVL~mrkri~ltNf~ 184 (309)
T COG5070 107 LIAYGEVLFFGGRVTSLELLSFILMVLSSVVATWGDQQASAFK--AQILNPGYLWMFTNCLSSAAFVLIMRKRIKLTNFK 184 (309)
T ss_pred hhHhhHHHHhcCccchhhHHHHHHHHHHHHHhccchhhHHHHH--hcccCCceEEEehhhHhHHHHHHHHHHhhcccccc
Confidence 6778889999999999999999999999888887775432111 12334588888777777655444444444322211
Q ss_pred hHHHHHHHH-HHHHHHHHHH-HHhhccccccccCccccccccccchHH--HHHHHHHHHhh--hhhhhhhhhhhHHHHHH
Q 026565 93 LYWQNVQLY-TFGAIFNMFR-LLLDDFRGGFEKGPWWQRLFDGYNITT--WMVVFNLGSTG--LLVSWLMKYADNIIKVY 166 (237)
Q Consensus 93 ~~~~n~~L~-~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~g~~~~~--~~~il~~a~~G--l~va~vlk~~d~i~k~~ 166 (237)
- .+.+++. ..++++.+.. .+.+||... +.-.++++-. |..|-.....| -+.++++|..++-.-+.
T Consensus 185 d-~dtmfYnNllslPiL~~~s~~~edws~~--------n~annl~~d~l~am~ISgl~svgiSy~saWcvrVtSSTtySM 255 (309)
T COG5070 185 D-FDTMFYNNLLSLPILLSFSFLFEDWSPG--------NLANNLSVDSLMAMFISGLCSVGISYCSAWCVRVTSSTTYSM 255 (309)
T ss_pred h-hhHHHHhhhHHHHHHHHHHHHhccCCcc--------hhhcCCChHHHHHHHHHHHHHhhhhhccceeEeehhhhHHHH
Confidence 0 1233332 4555555543 345666532 2344454433 44332222222 33445555444433333
Q ss_pred HHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHhHhccCCCCC
Q 026565 167 STSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAPPGM 211 (237)
Q Consensus 167 a~s~siv~s~lls~~~f~~~~t~~~~vG~~lV~~s~~lY~~~~~~ 211 (237)
.-++.=....+.+.++||+|.+...+....+-+.+..+|..+..+
T Consensus 256 vGALNKlp~alaGlvffdap~nf~si~sillGflsg~iYavaks~ 300 (309)
T COG5070 256 VGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAIYAVAKSK 300 (309)
T ss_pred HHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333333456778889999999999999999999888888776443
No 40
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=97.45 E-value=0.00024 Score=53.53 Aligned_cols=41 Identities=32% Similarity=0.604 Sum_probs=37.1
Q ss_pred hhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhhcccCCC
Q 026565 9 RPFHFSLKFSRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCG 50 (237)
Q Consensus 9 ~p~~~tall~~~~L~~~ls~~qw~al~ll~~Gv~l~~~~~~~ 50 (237)
.|+ ++++++++++|||+++++|.++++.++|++++..++.+
T Consensus 70 ~pi-~~~ll~~~~~~er~~~~~~~a~~l~~~Gv~li~~~~~~ 110 (113)
T PF13536_consen 70 SPI-FTALLSWLFFKERLSPRRWLAILLILIGVILIAWSDLT 110 (113)
T ss_pred HHH-HHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhhcc
Confidence 455 99999999999999999999999999999999877653
No 41
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=97.12 E-value=0.0089 Score=52.99 Aligned_cols=117 Identities=13% Similarity=0.065 Sum_probs=78.5
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHhhcCCc-hhHH-HHHHHHHHHHHHHHHHHHhhccccccccCccccccccccch
Q 026565 59 AAPIQGYLLGVLSACLSALAGVYTEFLMKKNND-SLYW-QNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNI 136 (237)
Q Consensus 59 ~~~~~G~~~~l~~a~~sa~a~vy~E~~~K~~~~-~~~~-~n~~L~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~ 136 (237)
++...|+.++++++++.+.+-.+++|..++.+. +... ++..- .+.. ..
T Consensus 3 ~~~~iGv~lav~ss~~~~~g~~lqk~~~~r~~~~~~~~~~~~~~-----------------------------~l~~-~~ 52 (300)
T PF05653_consen 3 TDFYIGVLLAVVSSIFIAVGFNLQKKSHLRLPRGSLRAGSGGRS-----------------------------YLRR-PL 52 (300)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccchhhH-----------------------------HHhh-HH
Confidence 456889999999999999999999988766532 1110 00000 0000 11
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHhHhcc
Q 026565 137 TTWMVVFNLGSTGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYF 206 (237)
Q Consensus 137 ~~~~~il~~a~~Gl~va~vlk~~d~i~k~~a~s~siv~s~lls~~~f~~~~t~~~~vG~~lV~~s~~lY~ 206 (237)
|...++ ..+++.+.--..+.++...+-+.-.+++++++.+++.++++|+++...++|.++++.|+.+--
T Consensus 53 W~~G~~-~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv 121 (300)
T PF05653_consen 53 WWIGLL-LMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIV 121 (300)
T ss_pred HHHHHH-HHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeE
Confidence 222222 223333333344566667777777788999999999999999999999999999998886543
No 42
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=97.11 E-value=0.005 Score=46.47 Aligned_cols=58 Identities=10% Similarity=0.096 Sum_probs=46.6
Q ss_pred hhhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHhHhc
Q 026565 148 TGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMY 205 (237)
Q Consensus 148 ~Gl~va~vlk~~d~i~k~~a~s~siv~s~lls~~~f~~~~t~~~~vG~~lV~~s~~lY 205 (237)
...+.+.++|+.+--......+++.+++.++++++|||++|+..++|.++++.|+.+-
T Consensus 50 ~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i 107 (111)
T PRK15051 50 AMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVIL 107 (111)
T ss_pred HHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHH
Confidence 3445566677765555555556889999999999999999999999999999998754
No 43
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=97.09 E-value=0.031 Score=49.07 Aligned_cols=137 Identities=12% Similarity=0.146 Sum_probs=80.1
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhh-ccccccccCccccccccccchHH
Q 026565 60 APIQGYLLGVLSACLSALAGVYTEFLMKKNNDSLYWQNVQLYTFGAIFNMFRLLLD-DFRGGFEKGPWWQRLFDGYNITT 138 (237)
Q Consensus 60 ~~~~G~~~~l~~a~~sa~a~vy~E~~~K~~~~~~~~~n~~L~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~g~~~~~ 138 (237)
+...|+.+++++++++|..+++.+. ..+.+ +...-..+. .++.++........ +.+...+ .+.......
T Consensus 5 ~~~~g~~~~l~a~~~wg~~~~~~k~-~~~~~-~~~~~~~R~-~~a~~~l~~~~~~~~~~~~~~~-------~~~~~~~~~ 74 (296)
T PRK15430 5 QTRQGVLLALAAYFIWGIAPAYFKL-IYYVP-ADEILTHRV-IWSFFFMVVLMSICRQWSYLKT-------LIQTPQKIF 74 (296)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHH-hcCCC-HHHHHHHHH-HHHHHHHHHHHHHHccHHHHHH-------HHcCHHHHH
Confidence 3567999999999999999999854 43322 222112222 22332222222221 1111000 001111111
Q ss_pred H--HHHHHHHHhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHhHhcc
Q 026565 139 W--MVVFNLGSTGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYF 206 (237)
Q Consensus 139 ~--~~il~~a~~Gl~va~vlk~~d~i~k~~a~s~siv~s~lls~~~f~~~~t~~~~vG~~lV~~s~~lY~ 206 (237)
+ .-.+..+....+.-.-++|.+....+....+.++++.++++++++|+++...++|..+.+.|+.+-.
T Consensus 75 ~~~~~~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~ 144 (296)
T PRK15430 75 MLAVSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQL 144 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHH
Confidence 1 1112222223333344577777777788888999999999999999999999999999999988654
No 44
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=97.07 E-value=0.0081 Score=46.05 Aligned_cols=64 Identities=14% Similarity=0.223 Sum_probs=47.7
Q ss_pred HHhhhhhhhhhhhhh-HHHHHHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHhHhccCCC
Q 026565 146 GSTGLLVSWLMKYAD-NIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAPP 209 (237)
Q Consensus 146 a~~Gl~va~vlk~~d-~i~k~~a~s~siv~s~lls~~~f~~~~t~~~~vG~~lV~~s~~lY~~~~ 209 (237)
++.-.+.+..+|+.+ ++.-+.-+.+.++.+.++++++|||++|+..++|..+++.|+..-+...
T Consensus 41 ~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~ 105 (120)
T PRK10452 41 SLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGT 105 (120)
T ss_pred HHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCC
Confidence 333444566666653 2223334467889999999999999999999999999999998776544
No 45
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=96.96 E-value=0.051 Score=47.89 Aligned_cols=68 Identities=12% Similarity=0.203 Sum_probs=57.0
Q ss_pred HHHHhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHhHhccCCCCC
Q 026565 144 NLGSTGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAPPGM 211 (237)
Q Consensus 144 ~~a~~Gl~va~vlk~~d~i~k~~a~s~siv~s~lls~~~f~~~~t~~~~vG~~lV~~s~~lY~~~~~~ 211 (237)
.+.+...+--..++|.+--+....-+.+++.+.++++++++++.+...+++.+++.+|+.+++....+
T Consensus 73 ~~~~~~~~~~~al~~i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~ 140 (303)
T PF08449_consen 73 LFFLASVLSNAALKYISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSS 140 (303)
T ss_pred HHHHHHHHHHHHHHhCChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeecccc
Confidence 33444444557788888888888899999999999999999999999999999999999999876543
No 46
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=96.92 E-value=0.015 Score=43.90 Aligned_cols=59 Identities=15% Similarity=0.228 Sum_probs=45.0
Q ss_pred hhhhhhhhhhhHHHHHH--HHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHhHhccCCC
Q 026565 150 LLVSWLMKYADNIIKVY--STSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAPP 209 (237)
Q Consensus 150 l~va~vlk~~d~i~k~~--a~s~siv~s~lls~~~f~~~~t~~~~vG~~lV~~s~~lY~~~~ 209 (237)
.+.+..+|+. ++-.++ -+.+.++.+.+.++++|||++|+..++|..+++.|+..-+...
T Consensus 45 ~~l~~al~~i-pl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~~ 105 (110)
T PRK09541 45 WLLAQTLAYI-PTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLLS 105 (110)
T ss_pred HHHHHHHhhC-CchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence 3345555654 333334 3446789999999999999999999999999999999876543
No 47
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=96.56 E-value=0.44 Score=41.18 Aligned_cols=176 Identities=14% Similarity=0.090 Sum_probs=96.0
Q ss_pred HHHHHH-HHHhcCCCCHHHHHHHHHHHHHHhhhcccCCCccccCcccccchhHHHHHHHHHHHHHHHHHHHHHHhhcCCc
Q 026565 13 FSLKFS-RLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGEALCDSLFAAPIQGYLLGVLSACLSALAGVYTEFLMKKNND 91 (237)
Q Consensus 13 ~tall~-~~~L~~~ls~~qw~al~ll~~Gv~l~~~~~~~~~~~~~~~~~~~~G~~~~l~~a~~sa~a~vy~E~~~K~~~~ 91 (237)
|+.-+. ..+..||..-.-|+++.++=.+..+-..++. ++-.-.|..+++.+..+++.-=+.-+|.-+..+.
T Consensus 105 F~GPL~vA~~~sRr~~d~vwvaLAvlGi~lL~p~~~~~--------~~lDp~Gv~~Al~AG~~Wa~YIv~G~r~g~~~~g 176 (292)
T COG5006 105 FTGPLAVALLSSRRLRDFVWVALAVLGIWLLLPLGQSV--------WSLDPVGVALALGAGACWALYIVLGQRAGRAEHG 176 (292)
T ss_pred hccHHHHHHHhccchhhHHHHHHHHHHHHhheeccCCc--------CcCCHHHHHHHHHHhHHHHHHHHHcchhcccCCC
Confidence 444333 4556777777778777665444433332221 2334579999999999988877777777643321
Q ss_pred hhHHHHHHHH-HHHHHHHHHHHHhhccccccccCccccccccccchHHHHHHHHH-----HHhhhhhhhhhhhhhHHHHH
Q 026565 92 SLYWQNVQLY-TFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNITTWMVVFNL-----GSTGLLVSWLMKYADNIIKV 165 (237)
Q Consensus 92 ~~~~~n~~L~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~il~~-----a~~Gl~va~vlk~~d~i~k~ 165 (237)
. +.+-+. ..+.++.+..... ..|+ -+ +++.....-+.. ++=+.+=...++....-.-+
T Consensus 177 ~---~g~a~gm~vAaviv~Pig~~-------~ag~----~l--~~p~ll~laLgvavlSSalPYsLEmiAL~rlp~~~F~ 240 (292)
T COG5006 177 T---AGVAVGMLVAALIVLPIGAA-------QAGP----AL--FSPSLLPLALGVAVLSSALPYSLEMIALRRLPARTFG 240 (292)
T ss_pred c---hHHHHHHHHHHHHHhhhhhh-------hcch----hh--cChHHHHHHHHHHHHhcccchHHHHHHHhhCChhHHH
Confidence 1 122111 1111111111111 1111 11 122221111111 11122222333444444444
Q ss_pred HHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHhHhccCCCCCC
Q 026565 166 YSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAPPGML 212 (237)
Q Consensus 166 ~a~s~siv~s~lls~~~f~~~~t~~~~vG~~lV~~s~~lY~~~~~~~ 212 (237)
.-.++.+.+..+.+++++||.+|+..++|...|+.+..=-++..+|+
T Consensus 241 ~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG~~lt~~~~ 287 (292)
T COG5006 241 TLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASAGSTLTARKP 287 (292)
T ss_pred HHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhccccccCCC
Confidence 55556678999999999999999999999999999888666666655
No 48
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=96.52 E-value=0.11 Score=44.29 Aligned_cols=53 Identities=11% Similarity=0.211 Sum_probs=44.1
Q ss_pred hhhhhhhhHHHHHHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHhHhc
Q 026565 153 SWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMY 205 (237)
Q Consensus 153 a~vlk~~d~i~k~~a~s~siv~s~lls~~~f~~~~t~~~~vG~~lV~~s~~lY 205 (237)
...++|.+....+....+.++++.++++++++|+++...++|..+.+.|+.+-
T Consensus 88 ~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li 140 (256)
T TIGR00688 88 IWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISN 140 (256)
T ss_pred HHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHH
Confidence 34456666666667777889999999999999999999999999999887643
No 49
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=96.45 E-value=0.033 Score=41.79 Aligned_cols=60 Identities=18% Similarity=0.277 Sum_probs=47.9
Q ss_pred hhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHhHhccCCC
Q 026565 149 GLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAPP 209 (237)
Q Consensus 149 Gl~va~vlk~~d~i~k~~a~s~siv~s~lls~~~f~~~~t~~~~vG~~lV~~s~~lY~~~~ 209 (237)
..+....++|.+. .-....+++++++.+++.++|+|+++...++|..++++|+.+-..+.
T Consensus 49 ~~~~~~a~~~~~~-~v~~i~~~~pi~~~ll~~~~~~er~~~~~~~a~~l~~~Gv~li~~~~ 108 (113)
T PF13536_consen 49 YLLFFYALSYAPA-LVAAIFSLSPIFTALLSWLFFKERLSPRRWLAILLILIGVILIAWSD 108 (113)
T ss_pred HHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhh
Confidence 3444455677774 44466778899999999999999999999999999999997765543
No 50
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=96.09 E-value=0.048 Score=48.31 Aligned_cols=36 Identities=19% Similarity=0.397 Sum_probs=32.4
Q ss_pred HHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhhcccC
Q 026565 13 FSLKFSRLFLRRRLSTLQWMAIVLLAVGTTTSQVKG 48 (237)
Q Consensus 13 ~tall~~~~L~~~ls~~qw~al~ll~~Gv~l~~~~~ 48 (237)
++++++..++|||+++++|.+.++.+.|++++....
T Consensus 89 ~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~~~ 124 (300)
T PF05653_consen 89 FNAVLARFFLGEKLTRRDIVGCALIILGSVLIVIFA 124 (300)
T ss_pred hHHHHhHHHhcccchHhHHhhHHHHHhhheeeEEeC
Confidence 899999999999999999999999999988765433
No 51
>COG2510 Predicted membrane protein [Function unknown]
Probab=96.08 E-value=0.0066 Score=46.88 Aligned_cols=34 Identities=35% Similarity=0.659 Sum_probs=31.9
Q ss_pred HHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhhcc
Q 026565 13 FSLKFSRLFLRRRLSTLQWMAIVLLAVGTTTSQV 46 (237)
Q Consensus 13 ~tall~~~~L~~~ls~~qw~al~ll~~Gv~l~~~ 46 (237)
+++++++++||||+|..||+..+++++|++++..
T Consensus 106 l~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs~ 139 (140)
T COG2510 106 LAVLLSILFLGERLSLPTWIGIVLIVIGAILVSL 139 (140)
T ss_pred HHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEec
Confidence 8999999999999999999999999999988753
No 52
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=96.00 E-value=0.4 Score=36.10 Aligned_cols=57 Identities=14% Similarity=0.170 Sum_probs=43.0
Q ss_pred hhhhhhhhhhhh-HHHHHHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHhHhc
Q 026565 149 GLLVSWLMKYAD-NIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMY 205 (237)
Q Consensus 149 Gl~va~vlk~~d-~i~k~~a~s~siv~s~lls~~~f~~~~t~~~~vG~~lV~~s~~lY 205 (237)
..+.+..+|+.+ .+.-+.-+....+.+.+.++++|+|++|+..++|..+++.|+..-
T Consensus 49 f~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~l 106 (109)
T PRK10650 49 FSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMI 106 (109)
T ss_pred HHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHh
Confidence 344455566552 222344556777999999999999999999999999999998764
No 53
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=95.79 E-value=0.86 Score=41.11 Aligned_cols=126 Identities=11% Similarity=-0.011 Sum_probs=74.3
Q ss_pred HHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhccccccccCcccccccc-ccch-HHHHHHHHHHHhh
Q 026565 72 ACLSALAGVYTEFLMKKNNDSLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFD-GYNI-TTWMVVFNLGSTG 149 (237)
Q Consensus 72 a~~sa~a~vy~E~~~K~~~~~~~~~n~~L~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-g~~~-~~~~~il~~a~~G 149 (237)
=.+|....++++.+++.-+.+.....+|+...++. ..+. .....+..++ +.. .... ....+-+.+....
T Consensus 58 y~~s~~~~~~nK~vl~~~~~P~~l~~~~~~~~~l~-~~~~-~~~~~~~~~~-------~~~~~~~~~~llp~gl~~~~~~ 128 (350)
T PTZ00343 58 YALNVLYVVDNKLALNMLPLPWTISSLQLFVGWLF-ALLY-WATGFRKIPR-------IKSLKLFLKNFLPQGLCHLFVH 128 (350)
T ss_pred HHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHH-HHHH-HHhCCCCCCC-------CCCHHHHHHHHHHHHHHHHHHH
Confidence 34567778999999987654666666666543332 2221 1111111000 100 0000 1111112222221
Q ss_pred hhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHhHhcc
Q 026565 150 LLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYF 206 (237)
Q Consensus 150 l~va~vlk~~d~i~k~~a~s~siv~s~lls~~~f~~~~t~~~~vG~~lV~~s~~lY~ 206 (237)
...-..+++.+...-....+++++++.++++++++|+++...++|.++++.|+.+-.
T Consensus 129 ~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~ 185 (350)
T PTZ00343 129 FGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALAS 185 (350)
T ss_pred HHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHhee
Confidence 111234566666667777888899999999999999999999999999999998765
No 54
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=95.77 E-value=0.56 Score=41.05 Aligned_cols=56 Identities=11% Similarity=0.117 Sum_probs=48.6
Q ss_pred hhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHhHhcc
Q 026565 151 LVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYF 206 (237)
Q Consensus 151 ~va~vlk~~d~i~k~~a~s~siv~s~lls~~~f~~~~t~~~~vG~~lV~~s~~lY~ 206 (237)
+....++|.+...-+...+++++++.++++++++|+++...++|..+++.|+.+-.
T Consensus 81 ~~~~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~ 136 (302)
T TIGR00817 81 TSNVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALAS 136 (302)
T ss_pred HHHHHHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhc
Confidence 34456688888888888889999999999999999999999999999999997653
No 55
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=95.76 E-value=0.018 Score=43.43 Aligned_cols=33 Identities=9% Similarity=0.188 Sum_probs=31.3
Q ss_pred HHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhhc
Q 026565 13 FSLKFSRLFLRRRLSTLQWMAIVLLAVGTTTSQ 45 (237)
Q Consensus 13 ~tall~~~~L~~~ls~~qw~al~ll~~Gv~l~~ 45 (237)
++++++++++|||++++||.++.++.+|++++.
T Consensus 76 ~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~ 108 (111)
T PRK15051 76 WVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG 108 (111)
T ss_pred HHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence 889999999999999999999999999998765
No 56
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=95.59 E-value=0.16 Score=37.98 Aligned_cols=58 Identities=19% Similarity=0.218 Sum_probs=44.6
Q ss_pred hhhhhhhhhhh-HHHHHHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHhHhccC
Q 026565 150 LLVSWLMKYAD-NIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFA 207 (237)
Q Consensus 150 l~va~vlk~~d-~i~k~~a~s~siv~s~lls~~~f~~~~t~~~~vG~~lV~~s~~lY~~ 207 (237)
.+.+..+|+.+ .+.-+.-+...++.+.+.++++|||+++...++|..+++.|+..-+.
T Consensus 45 ~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~ 103 (106)
T COG2076 45 YLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKL 103 (106)
T ss_pred HHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhh
Confidence 34455566653 23344566677899999999999999999999999999999876443
No 57
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=95.59 E-value=0.091 Score=45.15 Aligned_cols=67 Identities=13% Similarity=0.141 Sum_probs=58.1
Q ss_pred HHhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHhHhccCCCCCC
Q 026565 146 GSTGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAPPGML 212 (237)
Q Consensus 146 a~~Gl~va~vlk~~d~i~k~~a~s~siv~s~lls~~~f~~~~t~~~~vG~~lV~~s~~lY~~~~~~~ 212 (237)
+++..+.-..+++.|..+-.......++.++++++++++.+++...+++..+.+.|+.+...++...
T Consensus 28 ~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~~ 94 (244)
T PF04142_consen 28 AIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQS 94 (244)
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCccc
Confidence 3334455567888999998999999999999999999999999999999999999999988876654
No 58
>PRK11431 multidrug efflux system protein; Provisional
Probab=95.52 E-value=0.19 Score=37.52 Aligned_cols=57 Identities=12% Similarity=0.157 Sum_probs=43.6
Q ss_pred hhhhhhhhhhh-HHHHHHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHhHhcc
Q 026565 150 LLVSWLMKYAD-NIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYF 206 (237)
Q Consensus 150 l~va~vlk~~d-~i~k~~a~s~siv~s~lls~~~f~~~~t~~~~vG~~lV~~s~~lY~ 206 (237)
.+.+..+|+.+ .+.-+.-+.+.++.+.++++++|+|++|+..++|..+++.|+..-+
T Consensus 44 ~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~ 101 (105)
T PRK11431 44 ALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLK 101 (105)
T ss_pred HHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhh
Confidence 34444555442 3334556667789999999999999999999999999999987644
No 59
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=95.34 E-value=0.023 Score=42.17 Aligned_cols=37 Identities=30% Similarity=0.442 Sum_probs=33.6
Q ss_pred ChhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhhc
Q 026565 8 TRPFHFSLKFSRLFLRRRLSTLQWMAIVLLAVGTTTSQ 45 (237)
Q Consensus 8 ~~p~~~tall~~~~L~~~ls~~qw~al~ll~~Gv~l~~ 45 (237)
..|+ ++.+++++++||+++++||.++++...|+.++.
T Consensus 89 ~~pv-~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~ 125 (126)
T PF00892_consen 89 LSPV-FAAILGWLFLGERPSWRQIIGIILIIIGVVLIS 125 (126)
T ss_pred HHHH-HHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 5566 999999999999999999999999999998764
No 60
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=95.27 E-value=1.1 Score=38.99 Aligned_cols=50 Identities=18% Similarity=0.250 Sum_probs=40.8
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHhHhccC
Q 026565 157 KYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFA 207 (237)
Q Consensus 157 k~~d~i~k~~a~s~siv~s~lls~~~f~~~~t~~~~vG~~lV~~s~~lY~~ 207 (237)
++.++-..+...++.++++.+++.+ ++|+++...++|..+.++|+++-..
T Consensus 92 ~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~~ 141 (292)
T PRK11272 92 QNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLNS 141 (292)
T ss_pred ccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHhc
Confidence 5555555667777889999999975 7999999999999999999887653
No 61
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=95.19 E-value=0.86 Score=39.98 Aligned_cols=129 Identities=11% Similarity=0.001 Sum_probs=70.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhccccccccCccccccccccchHHHHHHH
Q 026565 64 GYLLGVLSACLSALAGVYTEFLMKKNNDSLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNITTWMVVF 143 (237)
Q Consensus 64 G~~~~l~~a~~sa~a~vy~E~~~K~~~~~~~~~n~~L~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~il 143 (237)
|+++++++++++|..++..++.. +- +..| .+...+...++..........+ ++......+.++.
T Consensus 2 ~~l~~lia~~~wGs~g~~~k~~~-g~-~~~~--~~~~~~g~l~~~~~~~~~~~~~------------~~~~~~~~~g~l~ 65 (290)
T TIGR00776 2 DILIALIPALFWGSFVLINVKIG-GG-PYSQ--TLGTTFGALILSIAIAIFVLPE------------FWALSIFLVGLLS 65 (290)
T ss_pred chHHHHHHHHHHhhhHHHHhccC-CC-HHHH--HHHHHHHHHHHHHHHHHHhCCc------------ccccHHHHHHHHH
Confidence 57789999999999999987764 21 1222 2222222222222222221100 0101111111111
Q ss_pred --HHHHhhhhhhhhhhhhhHHHHH-HHHHHHHHHHHHHHHHHcCCCccHHH----HHHHHHHHHHhHhccCC
Q 026565 144 --NLGSTGLLVSWLMKYADNIIKV-YSTSMAMLLTMVLSVYLFNFKPTLQL----FLGIIICMMSLHMYFAP 208 (237)
Q Consensus 144 --~~a~~Gl~va~vlk~~d~i~k~-~a~s~siv~s~lls~~~f~~~~t~~~----~vG~~lV~~s~~lY~~~ 208 (237)
.-+.+.+..-..+|+.+--+.- ..+.+..+++.+.+.++|+|+.+... ++|.+++++|+++....
T Consensus 66 G~~w~ig~~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~ 137 (290)
T TIGR00776 66 GAFWALGQINQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSRS 137 (290)
T ss_pred HHHHHhhhhhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEec
Confidence 0112223223334554222221 22446677899999999999999999 99999999999987654
No 62
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=95.06 E-value=0.056 Score=41.42 Aligned_cols=36 Identities=22% Similarity=0.289 Sum_probs=33.2
Q ss_pred HHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhhcccC
Q 026565 13 FSLKFSRLFLRRRLSTLQWMAIVLLAVGTTTSQVKG 48 (237)
Q Consensus 13 ~tall~~~~L~~~ls~~qw~al~ll~~Gv~l~~~~~ 48 (237)
.+++++.++++|++++.||+++.++++|++.....+
T Consensus 70 ~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~ 105 (120)
T PRK10452 70 FITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGT 105 (120)
T ss_pred HHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCC
Confidence 788999999999999999999999999999887654
No 63
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=95.05 E-value=0.72 Score=39.06 Aligned_cols=56 Identities=13% Similarity=0.045 Sum_probs=47.2
Q ss_pred hhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHhHhccC
Q 026565 152 VSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFA 207 (237)
Q Consensus 152 va~vlk~~d~i~k~~a~s~siv~s~lls~~~f~~~~t~~~~vG~~lV~~s~~lY~~ 207 (237)
...-++|.+....+...++.++++.+++.++++|++++..++|..+.++|+.+...
T Consensus 64 ~~~a~~~~~~~~~~ii~~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~~ 119 (260)
T TIGR00950 64 YFVAVKRLPVGEAALLLYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLLS 119 (260)
T ss_pred HHHHHHhcChhhhHHHHhhhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhcc
Confidence 33445666666667788888999999999999999999999999999999888654
No 64
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=94.91 E-value=1.9 Score=39.12 Aligned_cols=55 Identities=13% Similarity=0.303 Sum_probs=47.6
Q ss_pred hhhhhhhhhHHHHHHHHHHHHHHHHHHHHHH------cCCCccHHHHHHHHHHHHHhHhcc
Q 026565 152 VSWLMKYADNIIKVYSTSMAMLLTMVLSVYL------FNFKPTLQLFLGIIICMMSLHMYF 206 (237)
Q Consensus 152 va~vlk~~d~i~k~~a~s~siv~s~lls~~~------f~~~~t~~~~vG~~lV~~s~~lY~ 206 (237)
...-++|.++...+...++.++++.++++++ ++|+++...++|..+.+.|+.+-.
T Consensus 95 ~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~ 155 (358)
T PLN00411 95 GYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVI 155 (358)
T ss_pred HHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHH
Confidence 3445688888888999999999999999998 699999999999999999887543
No 65
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=94.86 E-value=0.06 Score=40.26 Aligned_cols=35 Identities=14% Similarity=0.231 Sum_probs=32.4
Q ss_pred HHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhhccc
Q 026565 13 FSLKFSRLFLRRRLSTLQWMAIVLLAVGTTTSQVK 47 (237)
Q Consensus 13 ~tall~~~~L~~~ls~~qw~al~ll~~Gv~l~~~~ 47 (237)
.+++.+++++||+++..|++++.++.+|++.....
T Consensus 70 ~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~~ 104 (106)
T COG2076 70 GTALVGVLLFGESLSLIKLLGLALILAGVIGLKLG 104 (106)
T ss_pred HHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhhc
Confidence 78999999999999999999999999999887653
No 66
>PRK13499 rhamnose-proton symporter; Provisional
Probab=94.85 E-value=2.9 Score=37.81 Aligned_cols=68 Identities=15% Similarity=0.121 Sum_probs=44.6
Q ss_pred HHHHHHHHHhcCC---CCHH----HHHHHHHHHHHHhhhcc----cCCCccccCcccccchhHHHHHHHHHHHHHHHHH
Q 026565 13 FSLKFSRLFLRRR---LSTL----QWMAIVLLAVGTTTSQV----KGCGEALCDSLFAAPIQGYLLGVLSACLSALAGV 80 (237)
Q Consensus 13 ~tall~~~~L~~~---ls~~----qw~al~ll~~Gv~l~~~----~~~~~~~~~~~~~~~~~G~~~~l~~a~~sa~a~v 80 (237)
.++++..++++|= ++.. -..+++++++|+++... ++.+++.+++...+.-.|+..++++.+.|++-..
T Consensus 113 ~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~Ag~~k~~~~~~~~~~~~~~~KGi~ialisgi~~~~f~~ 191 (345)
T PRK13499 113 VGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGRAGQLKERKMGIKKAEEFNLKKGLILAVMSGIFSACFSF 191 (345)
T ss_pred HHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHhhhhcccccccccccccchHhHHHHHHHHHHHHHHHHH
Confidence 6677777777732 2333 36678888999999887 4332211101234556799999999999888773
No 67
>PRK11689 aromatic amino acid exporter; Provisional
Probab=94.70 E-value=1 Score=39.43 Aligned_cols=50 Identities=14% Similarity=0.166 Sum_probs=42.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHhHhccCC
Q 026565 159 ADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAP 208 (237)
Q Consensus 159 ~d~i~k~~a~s~siv~s~lls~~~f~~~~t~~~~vG~~lV~~s~~lY~~~ 208 (237)
.++...+...++.++++.++++++++|+++...++|..+.++|+.+-..+
T Consensus 89 ~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~~ 138 (295)
T PRK11689 89 RQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVLGG 138 (295)
T ss_pred ccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhheecC
Confidence 34555567778889999999999999999999999999999999776543
No 68
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=94.69 E-value=1.9 Score=37.72 Aligned_cols=52 Identities=12% Similarity=0.264 Sum_probs=41.8
Q ss_pred hhh-hhHHHHHHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHhHhccC
Q 026565 156 MKY-ADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFA 207 (237)
Q Consensus 156 lk~-~d~i~k~~a~s~siv~s~lls~~~f~~~~t~~~~vG~~lV~~s~~lY~~ 207 (237)
++| ...-..+...++.++++.++++++++|+++...++|.++.++|+.+-..
T Consensus 80 ~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~ 132 (299)
T PRK11453 80 INFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIE 132 (299)
T ss_pred HHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhcc
Confidence 344 2444555667788899999999999999999999999999999876553
No 69
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=94.57 E-value=1.9 Score=38.85 Aligned_cols=59 Identities=17% Similarity=0.310 Sum_probs=46.4
Q ss_pred hhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHhHhccCCC
Q 026565 151 LVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAPP 209 (237)
Q Consensus 151 ~va~vlk~~d~i~k~~a~s~siv~s~lls~~~f~~~~t~~~~vG~~lV~~s~~lY~~~~ 209 (237)
++-..++|.+-..-..-.+.+++++.++|+++++++.++..++|..+++.|+.+-....
T Consensus 95 ~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD 153 (334)
T PF06027_consen 95 LVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSD 153 (334)
T ss_pred HHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeec
Confidence 33444566644444566778899999999999999999999999999999987665543
No 70
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=94.55 E-value=2.5 Score=35.75 Aligned_cols=56 Identities=21% Similarity=0.370 Sum_probs=45.6
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHH-HHcCCCccHHHHHHHHHHHHHhHhccCCCCC
Q 026565 156 MKYADNIIKVYSTSMAMLLTMVLSV-YLFNFKPTLQLFLGIIICMMSLHMYFAPPGM 211 (237)
Q Consensus 156 lk~~d~i~k~~a~s~siv~s~lls~-~~f~~~~t~~~~vG~~lV~~s~~lY~~~~~~ 211 (237)
++|.+.-......+..++++.+++. ++++|+++...+.|..+.+.|+.+-..+...
T Consensus 91 ~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~ 147 (292)
T COG0697 91 LKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGGG 147 (292)
T ss_pred HhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCCc
Confidence 4555555566677788899999996 6779999999999999999999988876554
No 71
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=94.49 E-value=0.093 Score=39.56 Aligned_cols=36 Identities=17% Similarity=0.243 Sum_probs=33.0
Q ss_pred HHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhhcccC
Q 026565 13 FSLKFSRLFLRRRLSTLQWMAIVLLAVGTTTSQVKG 48 (237)
Q Consensus 13 ~tall~~~~L~~~ls~~qw~al~ll~~Gv~l~~~~~ 48 (237)
.+++++++++||++++.|+.++.++.+|++.....+
T Consensus 70 ~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~~ 105 (110)
T PRK09541 70 LISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLLS 105 (110)
T ss_pred HHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence 678999999999999999999999999999987543
No 72
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=94.32 E-value=2 Score=33.58 Aligned_cols=128 Identities=15% Similarity=0.186 Sum_probs=69.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhccccccccCccccccccccchHHHHHHHH
Q 026565 65 YLLGVLSACLSALAGVYTEFLMKKNNDSLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNITTWMVVFN 144 (237)
Q Consensus 65 ~~~~l~~a~~sa~a~vy~E~~~K~~~~~~~~~n~~L~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~il~ 144 (237)
+++++.+..+.++.+..|-++-|+-+++ +.-+..-+..+.+...+.....+..... -..+.++|.|. .
T Consensus 3 ~lla~~aG~~i~~q~~~N~~L~~~~gs~-~~as~i~~~~G~i~~~i~~~~~~~~~~~--------~~~~~p~w~~l---G 70 (138)
T PF04657_consen 3 ILLALLAGALIALQAAFNGQLGKALGSP-LVASFISFGVGFILLLIILLITGRPSLA--------SLSSVPWWAYL---G 70 (138)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCcc-HHHHHHHHHHHHHHHHHHHHHhcccccc--------hhccCChHHhc---c
Confidence 4566777778888888898888776533 4455556666666666655444322111 11122333222 2
Q ss_pred HHHhhhhhh---hhhhhhhHHHHH-HHHHHHHHHHHHHHHH-HcC---CCccHHHHHHHHHHHHHhHh
Q 026565 145 LGSTGLLVS---WLMKYADNIIKV-YSTSMAMLLTMVLSVY-LFN---FKPTLQLFLGIIICMMSLHM 204 (237)
Q Consensus 145 ~a~~Gl~va---~vlk~~d~i~k~-~a~s~siv~s~lls~~-~f~---~~~t~~~~vG~~lV~~s~~l 204 (237)
..++...+. ..++..+..... ....-.++.+.+++.+ +|| +++++..++|..+++.|+++
T Consensus 71 G~lG~~~V~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L 138 (138)
T PF04657_consen 71 GLLGVFFVLSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL 138 (138)
T ss_pred HHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence 222222222 222222221111 1122224566677765 443 77999999999999999864
No 73
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=94.20 E-value=0.22 Score=36.13 Aligned_cols=49 Identities=18% Similarity=0.262 Sum_probs=25.6
Q ss_pred hhhhhhhhhhhHHH-HHHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHH
Q 026565 150 LLVSWLMKYADNII-KVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIIC 198 (237)
Q Consensus 150 l~va~vlk~~d~i~-k~~a~s~siv~s~lls~~~f~~~~t~~~~vG~~lV 198 (237)
.+.+..+|+.+--+ -...+.+..+.+.++++++|||++|+..++|..++
T Consensus 44 ~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI 93 (93)
T PF00893_consen 44 YFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI 93 (93)
T ss_dssp HHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred HHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence 44455566654332 23455678899999999999999999999999875
No 74
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=94.09 E-value=0.13 Score=39.79 Aligned_cols=36 Identities=6% Similarity=0.079 Sum_probs=29.5
Q ss_pred HHHHHHH--HHhcCCCCHHHHHHHHHHHHHHhhhcccC
Q 026565 13 FSLKFSR--LFLRRRLSTLQWMAIVLLAVGTTTSQVKG 48 (237)
Q Consensus 13 ~tall~~--~~L~~~ls~~qw~al~ll~~Gv~l~~~~~ 48 (237)
++++.++ +++||++|++||++++++++|+.+++.++
T Consensus 87 ~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~~ 124 (129)
T PRK02971 87 LVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLPT 124 (129)
T ss_pred HHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccCC
Confidence 3444555 38999999999999999999999988544
No 75
>PRK11431 multidrug efflux system protein; Provisional
Probab=94.04 E-value=0.1 Score=39.03 Aligned_cols=34 Identities=12% Similarity=0.153 Sum_probs=31.7
Q ss_pred HHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhhcc
Q 026565 13 FSLKFSRLFLRRRLSTLQWMAIVLLAVGTTTSQV 46 (237)
Q Consensus 13 ~tall~~~~L~~~ls~~qw~al~ll~~Gv~l~~~ 46 (237)
.+++.+++++||++++.||.++.++.+|++....
T Consensus 69 ~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~l 102 (105)
T PRK11431 69 GAAITGIVLLGESASPARLLSLALIVAGIIGLKL 102 (105)
T ss_pred HHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhhc
Confidence 7899999999999999999999999999988764
No 76
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=93.63 E-value=0.13 Score=38.77 Aligned_cols=33 Identities=24% Similarity=0.489 Sum_probs=30.8
Q ss_pred HHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhhc
Q 026565 13 FSLKFSRLFLRRRLSTLQWMAIVLLAVGTTTSQ 45 (237)
Q Consensus 13 ~tall~~~~L~~~ls~~qw~al~ll~~Gv~l~~ 45 (237)
.+++.+.+++||++++.||.++.++..|++...
T Consensus 75 ~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~lk 107 (109)
T PRK10650 75 ATLAAGWILFGQRLNRKGWIGLVLLLAGMVMIK 107 (109)
T ss_pred HHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhc
Confidence 788999999999999999999999999998765
No 77
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=92.61 E-value=0.3 Score=36.99 Aligned_cols=62 Identities=19% Similarity=0.214 Sum_probs=45.5
Q ss_pred HHHHHhhhhhhhhhhhhhHHHHH-HHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHhHh
Q 026565 143 FNLGSTGLLVSWLMKYADNIIKV-YSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHM 204 (237)
Q Consensus 143 l~~a~~Gl~va~vlk~~d~i~k~-~a~s~siv~s~lls~~~f~~~~t~~~~vG~~lV~~s~~l 204 (237)
+.|.++.+.--..+...|=.+.. .+++++.+++.+.++++.++..+...++|+.+|+.|+.+
T Consensus 49 ~lNq~GSv~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~L 111 (113)
T PF10639_consen 49 LLNQSGSVLFFLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVAL 111 (113)
T ss_pred HHHHHHHHHHHHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeee
Confidence 34444444444445555433333 467999999999999999888999999999999998864
No 78
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=92.56 E-value=0.25 Score=43.96 Aligned_cols=177 Identities=20% Similarity=0.305 Sum_probs=91.9
Q ss_pred HHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhhcccCCCccccCcc-------cccchhHHHHHHHHHHHHHHHHHHHHHH
Q 026565 13 FSLKFSRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGEALCDSL-------FAAPIQGYLLGVLSACLSALAGVYTEFL 85 (237)
Q Consensus 13 ~tall~~~~L~~~ls~~qw~al~ll~~Gv~l~~~~~~~~~~~~~~-------~~~~~~G~~~~l~~a~~sa~a~vy~E~~ 85 (237)
++++++..+|+|+++..-.++.++.++|..+......++.+-++. .+..++.+...+...++ .-+ ..
T Consensus 103 ~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~haP~e~~i~t~~el~~~~~~~~Fliy~~~iil~~~---il~---~~ 176 (335)
T KOG2922|consen 103 ISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIHAPKEQEIESVEEVWELATEPGFLVYVIIIILIVL---ILI---FF 176 (335)
T ss_pred HHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEecCcccccccHHHHHHHhcCccHHHHHHHHHHHHH---HHh---ee
Confidence 689999999999999999999999999987776554443322111 11122222222211111 111 11
Q ss_pred hh-cCCchhHHHHHHHHH--HHHHHHHH-------HHHhhccccccccCccccccccccchHHHHHHHHHHHhhhhhhhh
Q 026565 86 MK-KNNDSLYWQNVQLYT--FGAIFNMF-------RLLLDDFRGGFEKGPWWQRLFDGYNITTWMVVFNLGSTGLLVSWL 155 (237)
Q Consensus 86 ~K-~~~~~~~~~n~~L~~--~~~~~~~~-------~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~il~~a~~Gl~va~v 155 (237)
+| +++ ..|+..|+ .+.+-++- +..+... . +|. ... ..+.+|..++.. ..++..=
T Consensus 177 ~~p~~g----~tnilvyi~i~s~iGS~tV~svKalg~aiklt---~-~g~----~ql-~~~~ty~~~l~~---~~~~~~Q 240 (335)
T KOG2922|consen 177 YAPRYG----QTNILVYIGICSLIGSLTVMSVKALGIAIKLT---F-SGN----NQL-FYPLTWIFLLVV---ATCVSTQ 240 (335)
T ss_pred eccccc----ccceeehhhHhhhhcceeeeeHHHHHHHHHHH---h-cCC----ccc-ccHHHHHHHHHH---HHHHHHH
Confidence 12 222 12554443 22221111 0111100 0 010 011 112344333221 2445556
Q ss_pred hhhhhHHHHHHHHHHHH--------HHHHHHHHHHcCCC--c----cHHHHHHHHHHHHHhHhccCCCCC
Q 026565 156 MKYADNIIKVYSTSMAM--------LLTMVLSVYLFNFK--P----TLQLFLGIIICMMSLHMYFAPPGM 211 (237)
Q Consensus 156 lk~~d~i~k~~a~s~si--------v~s~lls~~~f~~~--~----t~~~~vG~~lV~~s~~lY~~~~~~ 211 (237)
++|++.-++.+-+++.. .++++.|..+|.|- . ...++.|...++.|+++-+...++
T Consensus 241 ~~yLNkAL~~fntslV~PiyyV~fTtl~I~as~I~Fkew~~~~~~~i~~~~~Gf~ti~~G~flL~~~kd~ 310 (335)
T KOG2922|consen 241 MNYLNKALDLFNTSIVSPIYYVMFTTLVILASAILFKEWSGQDALDIAGELCGFVTIFLGIFLLHRTKDM 310 (335)
T ss_pred HHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHhHHHhhheeeEeeeeccc
Confidence 78887777777665442 35777888888643 2 234788999999999988665443
No 79
>PRK13499 rhamnose-proton symporter; Provisional
Probab=91.11 E-value=3.7 Score=37.19 Aligned_cols=135 Identities=13% Similarity=0.148 Sum_probs=74.4
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHH----HHh--hccccccccCccccccccc
Q 026565 60 APIQGYLLGVLSACLSALAGVYTEFLMKKNNDSLYWQNVQLYTFGAIFNMFR----LLL--DDFRGGFEKGPWWQRLFDG 133 (237)
Q Consensus 60 ~~~~G~~~~l~~a~~sa~a~vy~E~~~K~~~~~~~~~n~~L~~~~~~~~~~~----~~~--~~~~~~~~~g~~~~~~~~g 133 (237)
+...|+++.+++++++|--.+=++| .|+-+ | |+++. ..++...++. ..+ .+..+ ....
T Consensus 4 ~~~~G~~~~~i~~~~~GS~~~p~K~-~k~w~---w-E~~W~-v~gi~~wl~~~~~~g~~~~~~f~~----------~~~~ 67 (345)
T PRK13499 4 AIILGIIWHLIGGASSGSFYAPFKK-VKKWS---W-ETMWS-VGGIFSWLILPWLIAALLLPDFWA----------YYSS 67 (345)
T ss_pred hhHHHHHHHHHHHHHhhcccccccc-cCCCc---h-hHHHH-HHHHHHHHHHHHHHHHHHhhhHHH----------HHHh
Confidence 4678999999999987766665554 55543 2 23333 2222111111 111 11111 1111
Q ss_pred cchHHH--HHH--HHHHHhhhhhhhhhhhhhH-HHHHHHHHHHHHHHHHHHHHHcCCCc-------cHHHHHHHHHHHHH
Q 026565 134 YNITTW--MVV--FNLGSTGLLVSWLMKYADN-IIKVYSTSMAMLLTMVLSVYLFNFKP-------TLQLFLGIIICMMS 201 (237)
Q Consensus 134 ~~~~~~--~~i--l~~a~~Gl~va~vlk~~d~-i~k~~a~s~siv~s~lls~~~f~~~~-------t~~~~vG~~lV~~s 201 (237)
.++..+ ..+ +.=+++++.....+||.+- ..-..++.+..+.+.++..++|||-. ....++|.+++++|
T Consensus 68 ~~~~~~~~~~l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliG 147 (345)
T PRK13499 68 FSGSTLLPVFLFGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIG 147 (345)
T ss_pred cCHHHHHHHHHHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHH
Confidence 222222 111 1113345666666777632 22334556778899999999998533 23478899999999
Q ss_pred hHhccCCCC
Q 026565 202 LHMYFAPPG 210 (237)
Q Consensus 202 ~~lY~~~~~ 210 (237)
+.+-+..-.
T Consensus 148 i~l~s~Ag~ 156 (345)
T PRK13499 148 VAIVGRAGQ 156 (345)
T ss_pred HHHHHHhhh
Confidence 998887433
No 80
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=89.19 E-value=4.1 Score=33.90 Aligned_cols=86 Identities=16% Similarity=0.061 Sum_probs=61.6
Q ss_pred CCChhHH---------HHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhhcccCCCcc------------ccCcc-cccchh
Q 026565 6 MITRPFH---------FSLKFSRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGEA------------LCDSL-FAAPIQ 63 (237)
Q Consensus 6 ~i~~p~~---------~tall~~~~L~~~ls~~qw~al~ll~~Gv~l~~~~~~~~~------------~~~~~-~~~~~~ 63 (237)
|+++|.| ++++..+.+.+||++..|+++..+++.|+....+.+.+.. +.++. ......
T Consensus 1 ~isvPa~~~~~s~~l~~v~l~~~~~~~~~~~~~~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~~~~~~~ 80 (222)
T TIGR00803 1 KLSVPIHIIFKQNNLVLIALGNLLAAGKQVTQLKILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSSAKTLMF 80 (222)
T ss_pred CccccchHHHHhcchHHHHHhcccccceeeehHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCCcccccc
Confidence 5788888 8999999999999999999999999999988766543210 00001 111344
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCc
Q 026565 64 GYLLGVLSACLSALAGVYTEFLMKKNND 91 (237)
Q Consensus 64 G~~~~l~~a~~sa~a~vy~E~~~K~~~~ 91 (237)
|.....+.+++.++..-+.+.+++++..
T Consensus 81 g~~~~g~~~~l~a~~~~~~~~~y~e~~~ 108 (222)
T TIGR00803 81 GNPVVGLSAVLSALLSSGFAGVYFEKIL 108 (222)
T ss_pred ccHHHHHHHHHHHHHHHhhhHHHHHHcc
Confidence 7776667777777777777888777643
No 81
>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function.
Probab=88.37 E-value=1.2 Score=33.20 Aligned_cols=44 Identities=7% Similarity=0.180 Sum_probs=36.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHhHh
Q 026565 161 NIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHM 204 (237)
Q Consensus 161 ~i~k~~a~s~siv~s~lls~~~f~~~~t~~~~vG~~lV~~s~~l 204 (237)
.-+|..-...++++-..+|+++++|+++++++.|.++++.++|+
T Consensus 62 ~QLKi~QEvitL~vF~~Fsv~~l~E~l~~n~l~af~~i~~av~f 105 (108)
T PF04342_consen 62 AQLKIIQEVITLVVFAPFSVFYLGEPLKWNYLWAFLCILGAVYF 105 (108)
T ss_pred HHHHHHHHHHhhheeHHHHHHHhCCCccHHHHHHHHHHHHhhhe
Confidence 34566666666777778889999999999999999999998875
No 82
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=86.85 E-value=0.64 Score=35.21 Aligned_cols=32 Identities=19% Similarity=0.382 Sum_probs=29.6
Q ss_pred HHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhh
Q 026565 13 FSLKFSRLFLRRRLSTLQWMAIVLLAVGTTTS 44 (237)
Q Consensus 13 ~tall~~~~L~~~ls~~qw~al~ll~~Gv~l~ 44 (237)
||++.++++.+|..+++.|..+.+.+.|+.++
T Consensus 81 fT~l~g~~lge~~~~~~~~~G~~Li~~Gv~Lc 112 (113)
T PF10639_consen 81 FTALTGWLLGEEVISRRTWLGMALILAGVALC 112 (113)
T ss_pred HHHHHHHHhcCcccchhHHHHHHHHHcCeeee
Confidence 99999999999999999999999999999775
No 83
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=85.65 E-value=16 Score=32.94 Aligned_cols=138 Identities=14% Similarity=0.209 Sum_probs=75.1
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHH--HHHHHHHHHH---HHhhccccccccCcccccccccc
Q 026565 60 APIQGYLLGVLSACLSALAGVYTEFLMKKNNDSLYWQNVQLY--TFGAIFNMFR---LLLDDFRGGFEKGPWWQRLFDGY 134 (237)
Q Consensus 60 ~~~~G~~~~l~~a~~sa~a~vy~E~~~K~~~~~~~~~n~~L~--~~~~~~~~~~---~~~~~~~~~~~~g~~~~~~~~g~ 134 (237)
.-+.|+++-.+++++++.-.+=.+|+ |+=+ | |+.++- +++.++.... ....|..++.+ ..
T Consensus 4 ~ii~Gii~h~iGg~~~~sfy~P~kkv-k~Ws---W-Es~Wlv~gi~swli~P~~~a~l~ip~~~~i~~----------~~ 68 (344)
T PF06379_consen 4 AIILGIIFHAIGGFASGSFYVPFKKV-KGWS---W-ESYWLVQGIFSWLIVPWLWALLAIPDFFSIYS----------AT 68 (344)
T ss_pred hHHHHHHHHHHHHHHhhhhccchhhc-CCcc---H-HHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHH----------hC
Confidence 35789999999998877766654443 2221 3 455443 3333322221 12233332222 12
Q ss_pred chH-HHHHH---HHHHHhhhhhhhhhhhhhHHH-HHHHHHHHHHHHHHHHHHHcC-------CCccHHHHHHHHHHHHHh
Q 026565 135 NIT-TWMVV---FNLGSTGLLVSWLMKYADNII-KVYSTSMAMLLTMVLSVYLFN-------FKPTLQLFLGIIICMMSL 202 (237)
Q Consensus 135 ~~~-~~~~i---l~~a~~Gl~va~vlk~~d~i~-k~~a~s~siv~s~lls~~~f~-------~~~t~~~~vG~~lV~~s~ 202 (237)
+.. .+... +.=.++|+.-+.-+||.+-.+ .+.+.-++.++..++.-++.| .+-....++|.+++++|+
T Consensus 69 ~~~~l~~~~l~G~lWGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGI 148 (344)
T PF06379_consen 69 PASTLFWTFLFGVLWGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGI 148 (344)
T ss_pred ChhHHHHHHHHHHHHhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHH
Confidence 211 11111 122346788888889884332 344444555666666544432 333456899999999999
Q ss_pred HhccCCCCCC
Q 026565 203 HMYFAPPGML 212 (237)
Q Consensus 203 ~lY~~~~~~~ 212 (237)
.+-...-.++
T Consensus 149 ai~g~AG~~K 158 (344)
T PF06379_consen 149 AICGKAGSMK 158 (344)
T ss_pred HHHhHHHHhh
Confidence 9888764433
No 84
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=84.12 E-value=29 Score=30.62 Aligned_cols=133 Identities=15% Similarity=0.192 Sum_probs=72.8
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHh-hccccccccCccccccccccchHHH
Q 026565 61 PIQGYLLGVLSACLSALAGVYTEFLMKKNNDSLYWQNVQLYTFGAIFNMFRLLL-DDFRGGFEKGPWWQRLFDGYNITTW 139 (237)
Q Consensus 61 ~~~G~~~~l~~a~~sa~a~vy~E~~~K~~~~~~~~~n~~L~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~~g~~~~~~ 139 (237)
...|+++.+.+.+++|+.-.|..-+-+-...++....+ ++++++.++.... ..++...+. .-++..+
T Consensus 5 ~~~Gil~~l~Ay~lwG~lp~y~kll~~~~~~eIlahRv---iwS~~~~l~ll~~~r~~~~~~~~---------~~~p~~~ 72 (293)
T COG2962 5 SRKGILLALLAYLLWGLLPLYFKLLEPLPATEILAHRV---IWSFPFMLALLFLLRQWRELKQL---------LKQPKTL 72 (293)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHHccCCHHHHHHHHH---HHHHHHHHHHHHHHhhhHHHHHH---------HhCcHHH
Confidence 45699999999999999999966654333322221121 3455554443322 222222110 0122222
Q ss_pred HHH-HHHHHhhh---hhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHhHhc
Q 026565 140 MVV-FNLGSTGL---LVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMY 205 (237)
Q Consensus 140 ~~i-l~~a~~Gl---~va~vlk~~d~i~k~~a~s~siv~s~lls~~~f~~~~t~~~~vG~~lV~~s~~lY 205 (237)
... +.....++ +--...++...+=.+..=...+.++++++.++|+|+++...++...+..+|+..-
T Consensus 73 ~~~~l~a~li~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~ 142 (293)
T COG2962 73 LMLALTALLIGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQ 142 (293)
T ss_pred HHHHHHHHHHHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHH
Confidence 211 12111111 0011122222222334445667899999999999999999999999988887643
No 85
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=83.52 E-value=1.8 Score=37.13 Aligned_cols=32 Identities=31% Similarity=0.514 Sum_probs=29.6
Q ss_pred HHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhh
Q 026565 13 FSLKFSRLFLRRRLSTLQWMAIVLLAVGTTTS 44 (237)
Q Consensus 13 ~tall~~~~L~~~ls~~qw~al~ll~~Gv~l~ 44 (237)
||-+.+.++++.+++.+||++-++.+.|...=
T Consensus 280 FTil~SVllf~npls~rQwlgtvlVF~aL~~D 311 (337)
T KOG1580|consen 280 FTILISVLLFNNPLSGRQWLGTVLVFSALTAD 311 (337)
T ss_pred HHHHHHHHHhcCcCcHHHHHHHHHHHHHhhhH
Confidence 99999999999999999999999999887653
No 86
>COG3169 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=83.48 E-value=5.7 Score=29.30 Aligned_cols=44 Identities=7% Similarity=0.190 Sum_probs=35.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHhHhc
Q 026565 162 IIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMY 205 (237)
Q Consensus 162 i~k~~a~s~siv~s~lls~~~f~~~~t~~~~vG~~lV~~s~~lY 205 (237)
-+|..-.-.+..+-..+|+++++||+.++.+.|..++..++++-
T Consensus 70 QLK~mQEVItL~iFv~Fsvfyl~epl~~~~l~a~~~i~gav~fi 113 (116)
T COG3169 70 QLKTMQEVITLAIFVPFSVFYLKEPLRWNYLWAFLLILGAVYFI 113 (116)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHh
Confidence 44555445555667788999999999999999999999998764
No 87
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=83.13 E-value=22 Score=28.34 Aligned_cols=136 Identities=13% Similarity=0.194 Sum_probs=67.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhccccccccCccccccccccchHHHHHH
Q 026565 63 QGYLLGVLSACLSALAGVYTEFLMKKNNDSLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNITTWMVV 142 (237)
Q Consensus 63 ~G~~~~l~~a~~sa~a~vy~E~~~K~~~~~~~~~n~~L~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~i 142 (237)
+.++..+++..+..+.+..|-++-|.-+.++.. ...=+..|+....+.....+..... ....+-++|.|.
T Consensus 5 l~ll~~i~aG~~l~~Q~~iN~qL~~~~~spl~A-s~isf~vGt~~L~~l~l~~~~~~~~-------a~~~~~pwW~~~-- 74 (150)
T COG3238 5 LYLLFAILAGALLPLQAAINGRLARYLGSPLLA-SLISFLVGTVLLLILLLIKQGHPGL-------AAVASAPWWAWI-- 74 (150)
T ss_pred HHHHHHHHHhhhhhhHHHHHHHHHHHcCChHHH-HHHHHHHHHHHHHHHHHHhcCCCch-------hhccCCchHHHH--
Confidence 455667777788888888888887776544321 2222233433333333332221100 011112223322
Q ss_pred HHHHHhhhhhhhhh----hhhhHHHHHHHHHHHHHHHHHHHHH-HcC---CCccHHHHHHHHHHHHHhHhccCCC
Q 026565 143 FNLGSTGLLVSWLM----KYADNIIKVYSTSMAMLLTMVLSVY-LFN---FKPTLQLFLGIIICMMSLHMYFAPP 209 (237)
Q Consensus 143 l~~a~~Gl~va~vl----k~~d~i~k~~a~s~siv~s~lls~~-~f~---~~~t~~~~vG~~lV~~s~~lY~~~~ 209 (237)
...+|.+.+..-+ |..-..+-....+-.++.+.+++.+ +|| .++++..++|.++++.|+++-....
T Consensus 75 -GG~lGa~~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~~~~ 148 (150)
T COG3238 75 -GGLLGAIFVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLARRFG 148 (150)
T ss_pred -ccchhhhhhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhcccc
Confidence 2222322222222 1111111122222224456666655 444 6699999999999999977765443
No 88
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=82.74 E-value=0.73 Score=41.04 Aligned_cols=74 Identities=12% Similarity=0.254 Sum_probs=52.6
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHhHhc-cCCCC
Q 026565 137 TTWMVVFNLGSTGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMY-FAPPG 210 (237)
Q Consensus 137 ~~~~~il~~a~~Gl~va~vlk~~d~i~k~~a~s~siv~s~lls~~~f~~~~t~~~~vG~~lV~~s~~lY-~~~~~ 210 (237)
+.|.=++.-.+|-+.-=..+-++..++-+.--+++++.+++++..+++|.+++.-.+|..+++.|.++- ...|+
T Consensus 66 ~Ww~G~ltm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~haP~ 140 (335)
T KOG2922|consen 66 LWWAGMLTMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIHAPK 140 (335)
T ss_pred HHHHHHHHHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEecCc
Confidence 334333333444333334445567777777788999999999999999999999999999999877554 33444
No 89
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=82.46 E-value=36 Score=30.39 Aligned_cols=73 Identities=12% Similarity=0.159 Sum_probs=63.0
Q ss_pred HHHHHHHHhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHhHhccCCCCCC
Q 026565 140 MVVFNLGSTGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAPPGML 212 (237)
Q Consensus 140 ~~il~~a~~Gl~va~vlk~~d~i~k~~a~s~siv~s~lls~~~f~~~~t~~~~vG~~lV~~s~~lY~~~~~~~ 212 (237)
.+-+.|.+++-+---.+||.+=-+...+-+..++-..+...+..+.+.++..++-+++|-.|+-++...+++.
T Consensus 88 ~is~tn~~s~~~~yeaLKyvSyPtq~LaKscKmIPVmlmg~Lvy~~ky~~~eYl~~~LIs~GvsiF~l~~~s~ 160 (327)
T KOG1581|consen 88 LISFTNTLSSWCGYEALKYVSYPTQTLAKSCKMIPVMLMGTLVYGRKYSSFEYLVAFLISLGVSIFSLFPNSD 160 (327)
T ss_pred HHHHHhhcchHHHHHHHHhccchHHHHHHHhhhhHHHHHHHHHhcCccCcHHHHHHHHHHhheeeEEEecCCC
Confidence 4446777777777788999998888999999999999999999999999999999999999998888876643
No 90
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=81.82 E-value=16 Score=31.66 Aligned_cols=26 Identities=15% Similarity=0.401 Sum_probs=20.1
Q ss_pred HcCCC-----ccHHHHHHHHHHHHHhHhccC
Q 026565 182 LFNFK-----PTLQLFLGIIICMMSLHMYFA 207 (237)
Q Consensus 182 ~f~~~-----~t~~~~vG~~lV~~s~~lY~~ 207 (237)
+||.+ -.+.-++|.+++++|..+|..
T Consensus 104 lFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~f 134 (254)
T PF07857_consen 104 LFGLDPQVPSSPWLNYIGVALVLVSGIIFSF 134 (254)
T ss_pred eccccccccchhHHHHHHHHHHHHHHHheee
Confidence 67644 345578999999999999966
No 91
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=79.51 E-value=2 Score=31.06 Aligned_cols=25 Identities=24% Similarity=0.380 Sum_probs=14.9
Q ss_pred HHHHHHHHHhcCCCCHHHHHHHHHH
Q 026565 13 FSLKFSRLFLRRRLSTLQWMAIVLL 37 (237)
Q Consensus 13 ~tall~~~~L~~~ls~~qw~al~ll 37 (237)
.+++++.+++||++|..||.++.++
T Consensus 69 ~~~~~~~~~f~E~~s~~~~~gi~lI 93 (93)
T PF00893_consen 69 GVTLVGVFFFGESLSLSKWLGIGLI 93 (93)
T ss_dssp HHHHHHHHHH--------HHHHHHH
T ss_pred HHHHHHHHHhCCCCCHHHHhheeeC
Confidence 7899999999999999999998764
No 92
>PHA03049 IMV membrane protein; Provisional
Probab=78.06 E-value=2.1 Score=29.06 Aligned_cols=23 Identities=13% Similarity=0.132 Sum_probs=18.8
Q ss_pred HHHHHHHHHHHHhHhccCCCCCC
Q 026565 190 QLFLGIIICMMSLHMYFAPPGML 212 (237)
Q Consensus 190 ~~~vG~~lV~~s~~lY~~~~~~~ 212 (237)
..+++.|+++++..+|....++.
T Consensus 5 ~~l~iICVaIi~lIvYgiYnkk~ 27 (68)
T PHA03049 5 IILVIICVVIIGLIVYGIYNKKT 27 (68)
T ss_pred HHHHHHHHHHHHHHHHHHHhccc
Confidence 35788999999999998876654
No 93
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=69.26 E-value=4.8 Score=36.76 Aligned_cols=56 Identities=14% Similarity=0.205 Sum_probs=44.9
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHhHhccCCCCCC-CCCCCcCc
Q 026565 165 VYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAPPGML-VDIPSTAK 220 (237)
Q Consensus 165 ~~a~s~siv~s~lls~~~f~~~~t~~~~vG~~lV~~s~~lY~~~~~~~-~~~~~~~~ 220 (237)
+.-++.|-+++..++..+-+|++|+.++++..+.+.|+.+-+....+| .|.|+.++
T Consensus 189 TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~~~~~~a~~~ 245 (416)
T KOG2765|consen 189 TILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQNSDLPASRP 245 (416)
T ss_pred hhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEeccccccccCCccch
Confidence 344555567888888888899999999999999999999999875554 55676655
No 94
>PF05961 Chordopox_A13L: Chordopoxvirus A13L protein; InterPro: IPR009236 This family consists of A13L proteins from the Chordopoxviruses. A13L or p8 is one of the three most abundant membrane proteins of the intracellular mature Vaccinia virus [].
Probab=67.68 E-value=4.5 Score=27.54 Aligned_cols=23 Identities=13% Similarity=0.151 Sum_probs=18.9
Q ss_pred HHHHHHHHHHHHhHhccCCCCCC
Q 026565 190 QLFLGIIICMMSLHMYFAPPGML 212 (237)
Q Consensus 190 ~~~vG~~lV~~s~~lY~~~~~~~ 212 (237)
..+++.|+++++..+|....++.
T Consensus 5 ~iLi~ICVaii~lIlY~iYnr~~ 27 (68)
T PF05961_consen 5 FILIIICVAIIGLILYGIYNRKK 27 (68)
T ss_pred HHHHHHHHHHHHHHHHHHHhccc
Confidence 35789999999999998876654
No 95
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=62.82 E-value=1.1e+02 Score=27.27 Aligned_cols=136 Identities=15% Similarity=0.136 Sum_probs=78.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHH--HHHHHHHHHHHHHHHH-hhccccccccCccccccccccchHHHH
Q 026565 64 GYLLGVLSACLSALAGVYTEFLMKKNNDSLYWQN--VQLYTFGAIFNMFRLL-LDDFRGGFEKGPWWQRLFDGYNITTWM 140 (237)
Q Consensus 64 G~~~~l~~a~~sa~a~vy~E~~~K~~~~~~~~~n--~~L~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~g~~~~~~~ 140 (237)
.++.++..++.|-+..+.|+.++..++.+-..-- .|.....+.....-.. .-+.+... .....-|-|...+
T Consensus 13 ~l~sa~~Y~~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~~~lv~~~~l~------~~~~kk~~P~~~l 86 (314)
T KOG1444|consen 13 PLLSALFYCLSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKRLGLVNFRPLD------LRTAKKWFPVSLL 86 (314)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHhceeecCCcC------hHHHHHHccHHHH
Confidence 4567778888888899999999988764322111 3332221111111110 00111100 0011112222211
Q ss_pred HHHHHHHhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHhHhccCCC
Q 026565 141 VVFNLGSTGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAPP 209 (237)
Q Consensus 141 ~il~~a~~Gl~va~vlk~~d~i~k~~a~s~siv~s~lls~~~f~~~~t~~~~vG~~lV~~s~~lY~~~~ 209 (237)
.. .+.+.|+ .-+||++--+-...-..+++++.+...++|+..++...+.......++...+..+.
T Consensus 87 f~-~~i~t~~---~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~~d 151 (314)
T KOG1444|consen 87 FV-GMLFTGS---KSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAAFTD 151 (314)
T ss_pred HH-HHHHHcc---ccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhcccc
Confidence 11 1222232 55788866566666668889999999999999999999999999999888876543
No 96
>COG3169 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=60.97 E-value=16 Score=27.01 Aligned_cols=32 Identities=19% Similarity=0.168 Sum_probs=26.9
Q ss_pred HHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhh
Q 026565 13 FSLKFSRLFLRRRLSTLQWMAIVLLAVGTTTS 44 (237)
Q Consensus 13 ~tall~~~~L~~~ls~~qw~al~ll~~Gv~l~ 44 (237)
.-+.|+.+.+||++.+.+|.+-.++..|+..+
T Consensus 82 iFv~Fsvfyl~epl~~~~l~a~~~i~gav~fi 113 (116)
T COG3169 82 IFVPFSVFYLKEPLRWNYLWAFLLILGAVYFI 113 (116)
T ss_pred HHHHHHHHHHcCcchHHHHHHHHHHHHHHHHh
Confidence 44678899999999999999988888887654
No 97
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=59.81 E-value=0.23 Score=42.67 Aligned_cols=61 Identities=11% Similarity=0.129 Sum_probs=39.0
Q ss_pred HHHHHHHHHhcCCCCHHH----HHHHHHHHHHHhhhcccCCCccccCcccccchhHHHHHHHHHHH
Q 026565 13 FSLKFSRLFLRRRLSTLQ----WMAIVLLAVGTTTSQVKGCGEALCDSLFAAPIQGYLLGVLSACL 74 (237)
Q Consensus 13 ~tall~~~~L~~~ls~~q----w~al~ll~~Gv~l~~~~~~~~~~~~~~~~~~~~G~~~~l~~a~~ 74 (237)
-+.+++++.+||=-+..| ..|++++..|+.+..+++..+... +..++.-.|+...+.+.+-
T Consensus 99 g~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~~~nk~~-~~~~n~kkgi~~L~iSt~G 163 (288)
T COG4975 99 GTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQDRNNKEE-ENPSNLKKGIVILLISTLG 163 (288)
T ss_pred hceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEeeeeccccccc-cChHhhhhheeeeeeeccc
Confidence 667888888898888888 468999999999988766432211 1122333455544444443
No 98
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=59.38 E-value=11 Score=33.12 Aligned_cols=43 Identities=19% Similarity=0.226 Sum_probs=38.2
Q ss_pred HHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHhHhccCCCC
Q 026565 168 TSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAPPG 210 (237)
Q Consensus 168 ~s~siv~s~lls~~~f~~~~t~~~~vG~~lV~~s~~lY~~~~~ 210 (237)
+-.++++++++++.+++||.|..-.+|..+-+.|+.+-..||-
T Consensus 130 tFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPpF 172 (346)
T KOG4510|consen 130 TFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPPF 172 (346)
T ss_pred EecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCCc
Confidence 3456899999999999999999999999999999988877654
No 99
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=58.43 E-value=1.4e+02 Score=28.07 Aligned_cols=50 Identities=20% Similarity=0.260 Sum_probs=27.7
Q ss_pred HHHHcCCCccHH-HHHHHHHHHHHhHhccCCCCCCC--CCCCcCcCCCchhhh
Q 026565 179 SVYLFNFKPTLQ-LFLGIIICMMSLHMYFAPPGMLV--DIPSTAKAAPDSLRE 228 (237)
Q Consensus 179 s~~~f~~~~t~~-~~vG~~lV~~s~~lY~~~~~~~~--~~~~~~~~~~~~~~~ 228 (237)
.++.++...-.. ..-|.+.+++|++++..-..+|. .+|+-.|-.+|..++
T Consensus 176 a~~~~~~~w~~~f~~pgiiaiival~~~~~~rd~Pqs~GLP~ie~~~~d~~e~ 228 (448)
T COG2271 176 AFFAFHGGWRAAFYFPGIIAIIVALILLFLLRDRPQSEGLPPIEEYRGDPLEI 228 (448)
T ss_pred HHHHhccchhHHHHHHHHHHHHHHHHHHHHhCCCccccCCCCHHHhhcCchhh
Confidence 444454333333 44556666688888876555443 357665655444443
No 100
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=58.20 E-value=3.3 Score=36.42 Aligned_cols=70 Identities=17% Similarity=0.188 Sum_probs=0.0
Q ss_pred HHHHHhcCCCCHH-HHHHHHHHHHHHhhhcccCCCccccCcccccchhHHHHHHHHHHHHHHHHHHHHHHhhcCCchhH
Q 026565 17 FSRLFLRRRLSTL-QWMAIVLLAVGTTTSQVKGCGEALCDSLFAAPIQGYLLGVLSACLSALAGVYTEFLMKKNNDSLY 94 (237)
Q Consensus 17 l~~~~L~~~ls~~-qw~al~ll~~Gv~l~~~~~~~~~~~~~~~~~~~~G~~~~l~~a~~sa~a~vy~E~~~K~~~~~~~ 94 (237)
+-.+++|||+-.. -.+|++++++-..++.+=... .+.-+.|+++.+++.++.=.--.|.+ ++++++.++|
T Consensus 67 iIImlF~RrLLCPLGlLCiilimi~lLv~~L~tLt-------GQ~LF~Gi~~l~l~~lLaL~vW~Ym~-lLr~~GAs~W 137 (381)
T PF05297_consen 67 IIIMLFKRRLLCPLGLLCIILIMIVLLVSMLWTLT-------GQTLFVGIVILFLCCLLALGVWFYMW-LLRELGASFW 137 (381)
T ss_dssp -------------------------------------------------------------------------------
T ss_pred HHHHHHHHhhcCcchHHHHHHHHHHHHHHHHHHhh-------ccHHHHHHHHHHHHHHHHHHHHHHHH-HHHHhhhHHH
Confidence 3345566665433 355666655544443322111 24467888887777776555566744 7778887777
No 101
>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function.
Probab=56.65 E-value=18 Score=27.02 Aligned_cols=29 Identities=17% Similarity=0.083 Sum_probs=23.6
Q ss_pred HHHHHHHHhcCCCCHHHHHHHHHHHHHHh
Q 026565 14 SLKFSRLFLRRRLSTLQWMAIVLLAVGTT 42 (237)
Q Consensus 14 tall~~~~L~~~ls~~qw~al~ll~~Gv~ 42 (237)
-+.++.+++||++++.+..+-+++..++.
T Consensus 76 F~~Fsv~~l~E~l~~n~l~af~~i~~av~ 104 (108)
T PF04342_consen 76 FAPFSVFYLGEPLKWNYLWAFLCILGAVY 104 (108)
T ss_pred eHHHHHHHhCCCccHHHHHHHHHHHHhhh
Confidence 45678889999999999888888876654
No 102
>KOG3788 consensus Predicted divalent cation transporter [Inorganic ion transport and metabolism]
Probab=52.32 E-value=34 Score=31.70 Aligned_cols=78 Identities=17% Similarity=0.176 Sum_probs=48.8
Q ss_pred CCChhHH----------HHHHHHHHHhcCCCCH------HHHHHHHHHHHHHhhhcccCCCccccCcccccchhHHHHHH
Q 026565 6 MITRPFH----------FSLKFSRLFLRRRLST------LQWMAIVLLAVGTTTSQVKGCGEALCDSLFAAPIQGYLLGV 69 (237)
Q Consensus 6 ~i~~p~~----------~tall~~~~L~~~ls~------~qw~al~ll~~Gv~l~~~~~~~~~~~~~~~~~~~~G~~~~l 69 (237)
||.+|+. .-+.++.++.+.+-+. .-|..+.+..++++++.-.+... +-.-.|.-.++
T Consensus 183 NIatPiaASlGDl~Tl~~L~~~~~~~~~~~~~~~~l~~~v~~~flal~pvwi~ia~~~~~t~-------~Vlk~gw~pvi 255 (441)
T KOG3788|consen 183 NIATPIAASLGDLLTLSSLAFFGSLFYNASDTSSYLTVLVVVFFLALLPVWIMIAAEDEGTR-------RVLKQGWEPVI 255 (441)
T ss_pred hhcchhhhhhhhHHHHHHHHHHHHHHHhhccchhhhHHHHHHHHHHHhHHHHhhhccCchhh-------hhHhcccHHHH
Confidence 8888987 3445556665555554 23445555566666665222111 11223555677
Q ss_pred HHHHHHHHHHHHHHHHhhcCC
Q 026565 70 LSACLSALAGVYTEFLMKKNN 90 (237)
Q Consensus 70 ~~a~~sa~a~vy~E~~~K~~~ 90 (237)
.+...|+++|...||...++.
T Consensus 256 ~Am~ISs~gGlIL~k~v~~y~ 276 (441)
T KOG3788|consen 256 IAMMISSFGGLILEKTVSRYP 276 (441)
T ss_pred HHHHHHcccchhhHhhHhhCC
Confidence 888899999999999888764
No 103
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=52.29 E-value=1.6e+02 Score=25.72 Aligned_cols=47 Identities=17% Similarity=0.235 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHHHHHHHcCCCccHHH----HHHHHHHHHHhHhccCCCCCC
Q 026565 166 YSTSMAMLLTMVLSVYLFNFKPTLQL----FLGIIICMMSLHMYFAPPGML 212 (237)
Q Consensus 166 ~a~s~siv~s~lls~~~f~~~~t~~~----~vG~~lV~~s~~lY~~~~~~~ 212 (237)
..+.+.++.+.+.++++|||.-+... +++..++++|+++-+..+++.
T Consensus 77 iStg~QLvg~sl~gv~~fgEW~~~~~~~~G~~Al~liiiGv~lts~~~~~~ 127 (269)
T PF06800_consen 77 ISTGLQLVGTSLIGVLFFGEWTTTTQKIIGFLALVLIIIGVILTSYQDKKS 127 (269)
T ss_pred cchhHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHhccccccc
Confidence 45667789999999999999877553 336667788888877766544
No 104
>COG4711 Predicted membrane protein [Function unknown]
Probab=42.89 E-value=2e+02 Score=24.15 Aligned_cols=69 Identities=20% Similarity=0.199 Sum_probs=39.7
Q ss_pred HHHhcCCCCHHHHHHHHHHHHHHhhhcccCC--Cccc---cCccc-ccchhHHHHHHHHHHHHHHHHHHHHHHhhcCC
Q 026565 19 RLFLRRRLSTLQWMAIVLLAVGTTTSQVKGC--GEAL---CDSLF-AAPIQGYLLGVLSACLSALAGVYTEFLMKKNN 90 (237)
Q Consensus 19 ~~~L~~~ls~~qw~al~ll~~Gv~l~~~~~~--~~~~---~~~~~-~~~~~G~~~~l~~a~~sa~a~vy~E~~~K~~~ 90 (237)
...+-.|+|+.+.+++++.+.+++..-.... .+++ ++.++ +.+ +.-.++..+.+.++++|.=..+.+-+
T Consensus 114 vwllA~~isp~h~lal~~~~l~I~y~fvy~a~f~~~~~~~~~~g~vp~r---l~~tmv~y~~~~l~~~y~l~~f~~~~ 188 (217)
T COG4711 114 VWLLAYRISPYHSLALVLVVLVIMYSFVYTAKFGNDKKREEGAGFVPRR---LRTTMVIYFVSSLASIYMLGIFTRFD 188 (217)
T ss_pred HHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccccceeeee---hHHHHHHHHHHHHHHHHHHHhhhhhh
Confidence 4566788999999999988888776532211 1111 11111 122 23456666777777777665555443
No 105
>KOG4831 consensus Unnamed protein [Function unknown]
Probab=42.16 E-value=25 Score=26.36 Aligned_cols=40 Identities=13% Similarity=0.164 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHhHhc
Q 026565 166 YSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMY 205 (237)
Q Consensus 166 ~a~s~siv~s~lls~~~f~~~~t~~~~vG~~lV~~s~~lY 205 (237)
++++++..++.+.+..+-.|...-..++|+.++++|+++.
T Consensus 84 v~nsltfafta~~G~~LGE~~~g~~a~lGt~liv~Gi~Lc 123 (125)
T KOG4831|consen 84 VTNSLTFAFTAIFGKALGEETQGGLALLGTSLIVFGIWLC 123 (125)
T ss_pred ecchhHHHHHHHHHHHhccccccceeehhhhHHhhhhhhe
Confidence 6788888899999998777778888999999999998763
No 106
>PF06123 CreD: Inner membrane protein CreD; InterPro: IPR010364 This family consists of several bacterial CreD or Cet inner membrane proteins. Dominant mutations of the cet gene of Escherichia coli result in tolerance to colicin E2 and increased amounts of an inner membrane protein with a Mr of 42,000. The cet gene is shown to be in the same operon as the phoM gene, which is required in a phoR background for expression of the structural gene for alkaline phosphatase, phoA. Although the Cet protein is not required for phoA expression, it has been suggested that the Cet protein has an enhancing effect on the transcription of phoA [].
Probab=41.93 E-value=2e+02 Score=26.93 Aligned_cols=82 Identities=11% Similarity=0.151 Sum_probs=47.9
Q ss_pred HHHHHhcCCCCHHHHHHHHH--HHHHHhhhcccCCCccccCcccccchhHHHHHHHHHHHHHHHHHHHHHHhhcCCchhH
Q 026565 17 FSRLFLRRRLSTLQWMAIVL--LAVGTTTSQVKGCGEALCDSLFAAPIQGYLLGVLSACLSALAGVYTEFLMKKNNDSLY 94 (237)
Q Consensus 17 l~~~~L~~~ls~~qw~al~l--l~~Gv~l~~~~~~~~~~~~~~~~~~~~G~~~~l~~a~~sa~a~vy~E~~~K~~~~~~~ 94 (237)
+.=++-|+|+.+.|+.-+.+ .+.=+.+..+++. --.+...++.++.+.++-+.|...++|+.+....
T Consensus 314 lfE~~~~~~iHpiQY~LVGlAl~lFYlLLLSlSEh-----------i~F~~AYliAa~a~i~Li~~Y~~~vl~~~k~~~~ 382 (430)
T PF06123_consen 314 LFELLSKLRIHPIQYLLVGLALVLFYLLLLSLSEH-----------IGFNLAYLIAALACIGLISLYLSSVLKSWKRGLI 382 (430)
T ss_pred HHHHHhcCcccHHHHHHHHHHHHHHHHHHHHHHhh-----------hchHHHHHHHHHHHHHHHHHHHHHHHhcchHHHH
Confidence 33455689999999865433 3333444454432 1123344556667778899999999998765544
Q ss_pred HHHHHHHHHHHHHHH
Q 026565 95 WQNVQLYTFGAIFNM 109 (237)
Q Consensus 95 ~~n~~L~~~~~~~~~ 109 (237)
+-.+...+++.+..+
T Consensus 383 ~~~~L~~LY~~Ly~l 397 (430)
T PF06123_consen 383 FAGLLAALYGFLYVL 397 (430)
T ss_pred HHHHHHHHHHHHHHH
Confidence 333333344444333
No 107
>PF00909 Ammonium_transp: Ammonium Transporter Family; InterPro: IPR024041 This ammonium transporter domain consists of a duplication of 2 structural repeats of five helices each plus one extra C-terminal helix. It has been described as a channel that spans the membrane 11 times [].; PDB: 3B9Z_A 3B9Y_A 3B9W_A 3BHS_A 2B2H_A 2B2J_A 2B2F_A 2B2I_A 2NPG_A 2NUU_E ....
Probab=41.29 E-value=80 Score=28.99 Aligned_cols=82 Identities=13% Similarity=0.039 Sum_probs=45.1
Q ss_pred ChhHH----HHHHHHHHHhcCCCCHH-------HHHHHHHHHHHHhhh--cccCCCccccCcccccchh-HHHHHHHHHH
Q 026565 8 TRPFH----FSLKFSRLFLRRRLSTL-------QWMAIVLLAVGTTTS--QVKGCGEALCDSLFAAPIQ-GYLLGVLSAC 73 (237)
Q Consensus 8 ~~p~~----~tall~~~~L~~~ls~~-------qw~al~ll~~Gv~l~--~~~~~~~~~~~~~~~~~~~-G~~~~l~~a~ 73 (237)
+.++| +.++....++++|..+. .--+..+.+.|..+. .+......+.....+.... ...-..+++.
T Consensus 153 ~~vVH~~gG~~gL~~a~~lg~R~~~~~~~~~~~~~~s~~~~~lG~~lLw~gW~gFN~gs~~~~~~~~~~~~~~nT~la~a 232 (399)
T PF00909_consen 153 SGVVHLFGGVFGLAAAIVLGPRRGRFDGKPNPIPPHSPPLAMLGTLLLWFGWFGFNAGSALAANGRAWLRAAVNTLLAAA 232 (399)
T ss_dssp TTTTHHHHHHHHHHHHHHH--CTTTTGTTTSS--HCHHHHHHHHHHHHHHHHHHHHHCCGSSSSHHHHH-HHHHHHHHHH
T ss_pred ceeeehhhhHHHHhhheeeCCCCCcccccccCCCCCcHHHhhhhHHHHHHHhcccccccccccCCccchhhhhhhhhhHH
Confidence 56788 78888889999999875 333455555554433 1221111000001111111 4455667778
Q ss_pred HHHHHHHHHHHHhhcC
Q 026565 74 LSALAGVYTEFLMKKN 89 (237)
Q Consensus 74 ~sa~a~vy~E~~~K~~ 89 (237)
.+++.....++..+++
T Consensus 233 ~g~l~~~~~~~~~~gk 248 (399)
T PF00909_consen 233 AGGLTWLLISYLLSGK 248 (399)
T ss_dssp HHHHHHHHHHHHHCSS
T ss_pred HHHHHHHHhhhccccc
Confidence 8888888899887644
No 108
>PF09813 Coiled-coil_56: Coiled-coil domain-containing protein 56; InterPro: IPR018628 Members of this family of proteins have no known function.
Probab=40.46 E-value=16 Score=26.87 Aligned_cols=24 Identities=13% Similarity=-0.042 Sum_probs=18.2
Q ss_pred HHHHHHHHHHHhHhccCCCCCCCC
Q 026565 191 LFLGIIICMMSLHMYFAPPGMLVD 214 (237)
Q Consensus 191 ~~vG~~lV~~s~~lY~~~~~~~~~ 214 (237)
..+|....++|+|.|+....+|.+
T Consensus 54 Tgl~L~~~v~gIY~YTi~sV~Qe~ 77 (100)
T PF09813_consen 54 TGLALGAFVVGIYAYTIYSVKQED 77 (100)
T ss_pred HHHHHHHHHHHHHhheeeeechhh
Confidence 345555678999999999888744
No 109
>PRK02237 hypothetical protein; Provisional
Probab=40.33 E-value=70 Score=24.02 Aligned_cols=44 Identities=14% Similarity=0.301 Sum_probs=32.2
Q ss_pred HHHHHHHH--HHHHHHHHHHHcCCCccHHHHHHHHHHHHHhHhccC
Q 026565 164 KVYSTSMA--MLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFA 207 (237)
Q Consensus 164 k~~a~s~s--iv~s~lls~~~f~~~~t~~~~vG~~lV~~s~~lY~~ 207 (237)
+.++..-. ++.+.+-.+...+.+||..-++|++++++|+.+-..
T Consensus 60 RvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~ 105 (109)
T PRK02237 60 RVYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMY 105 (109)
T ss_pred hHHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHhee
Confidence 44555544 345666677788999999999999999988755433
No 110
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=39.11 E-value=65 Score=24.10 Aligned_cols=49 Identities=12% Similarity=0.318 Sum_probs=35.7
Q ss_pred hHHHHHHHHHHH--HHHHHHHHHHHcCCCccHHHHHHHHHHHHHhHhccCC
Q 026565 160 DNIIKVYSTSMA--MLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAP 208 (237)
Q Consensus 160 d~i~k~~a~s~s--iv~s~lls~~~f~~~~t~~~~vG~~lV~~s~~lY~~~ 208 (237)
++-=+.++..-. ++.+.+-.+..-+++|+..-++|++++++|+.+-...
T Consensus 54 ~~fGRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~ 104 (107)
T PF02694_consen 54 AAFGRVYAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFA 104 (107)
T ss_pred ccchhHHHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEec
Confidence 444455666644 4566777777889999999999999999887654433
No 111
>COG2149 Predicted membrane protein [Function unknown]
Probab=38.19 E-value=1.2e+02 Score=23.04 Aligned_cols=49 Identities=20% Similarity=0.222 Sum_probs=31.2
Q ss_pred HHHHHHHHHHHHHHhhhcccCCCccccCcccccchhHHHHHHHHHHHHHHHHH
Q 026565 28 TLQWMAIVLLAVGTTTSQVKGCGEALCDSLFAAPIQGYLLGVLSACLSALAGV 80 (237)
Q Consensus 28 ~~qw~al~ll~~Gv~l~~~~~~~~~~~~~~~~~~~~G~~~~l~~a~~sa~a~v 80 (237)
.++=.|+.++..|+.+-++...-.. .......|..+.+++-++.+++..
T Consensus 28 AWiRTsLallafGvai~~f~~~l~~----~~~r~~lg~fii~~gil~~a~g~~ 76 (120)
T COG2149 28 AWIRTSLALLAFGVAIDQFVPFLAT----PVIRELLGVFLILVGILLAALGAL 76 (120)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhc----hHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455789999999999887643221 012345677777777766665544
No 112
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=35.66 E-value=3.7e+02 Score=25.04 Aligned_cols=55 Identities=11% Similarity=0.335 Sum_probs=29.0
Q ss_pred hhhhHHHHHHHHH--HHHHHHHHHHHHHcCCCccH--HHHHHHHHHHHHhHhccCCCCC
Q 026565 157 KYADNIIKVYSTS--MAMLLTMVLSVYLFNFKPTL--QLFLGIIICMMSLHMYFAPPGM 211 (237)
Q Consensus 157 k~~d~i~k~~a~s--~siv~s~lls~~~f~~~~t~--~~~vG~~lV~~s~~lY~~~~~~ 211 (237)
||..+++.+-+.+ ++-+..++.-..+-+++-+. .+.++.++++++..+|..-++.
T Consensus 148 ~ytqavm~G~a~aG~l~Sl~~i~tka~~~~~~~sA~~yF~~s~~~~llC~i~y~~l~~l 206 (406)
T KOG1479|consen 148 EYTQAVMSGQALAGTLTSLLRILTKAAFSDSRTSALIYFITSTVILLLCFVLYLVLPKL 206 (406)
T ss_pred HHHHHHHhcchhHhHHHHHHHHHHHHhcCCCCceeehhHHHHHHHHHHHHHHHHHhhcc
Confidence 6666666543332 22223333322223444332 3667777888999999854443
No 113
>COG3493 CitS Na+/citrate symporter [Energy production and conversion]
Probab=33.85 E-value=3.1e+02 Score=25.49 Aligned_cols=80 Identities=13% Similarity=0.141 Sum_probs=40.1
Q ss_pred ccCCChhHH---HHHHHHHHHhcCCCCHHHHHHHHHH-HHHHhhhcccCCCccccCcccccchh-HHHHHHHHHHHHHHH
Q 026565 4 ISMITRPFH---FSLKFSRLFLRRRLSTLQWMAIVLL-AVGTTTSQVKGCGEALCDSLFAAPIQ-GYLLGVLSACLSALA 78 (237)
Q Consensus 4 ~~~i~~p~~---~tall~~~~L~~~ls~~qw~al~ll-~~Gv~l~~~~~~~~~~~~~~~~~~~~-G~~~~l~~a~~sa~a 78 (237)
+..||.|++ +..++-..+ .+++..--.-+..++ +.|..+-+..+.-+- ..+++- |-.+.+..+..-.+.
T Consensus 19 Ig~ipLPly~~~~ivi~v~~~-~~~lP~~mlg~favm~vlG~llg~IG~riPI-----~nk~iGG~aIl~~fvaa~~v~~ 92 (438)
T COG3493 19 IGGIPLPLYAFLAIVIIVVVY-LGKLPSDMLGGFAVMFVLGALLGEIGKRIPI-----VNKYIGGGAILALFVAAYLVFY 92 (438)
T ss_pred ecccchHHHHHHHHHHHHHHH-HccCcHHHHHHHHHHHHHHHHHHHhcccCcc-----hhhccCCchHHHHHHHHHHHHh
Confidence 567899998 222222233 344443333344444 588877765543211 111111 223344444444667
Q ss_pred HHHHHHHhhcC
Q 026565 79 GVYTEFLMKKN 89 (237)
Q Consensus 79 ~vy~E~~~K~~ 89 (237)
++..|+..|.-
T Consensus 93 ~llp~~~i~av 103 (438)
T COG3493 93 NLLPSNVIKAV 103 (438)
T ss_pred ccCCHHHHHHH
Confidence 77778877654
No 114
>PRK11715 inner membrane protein; Provisional
Probab=33.81 E-value=3.3e+02 Score=25.62 Aligned_cols=80 Identities=11% Similarity=0.183 Sum_probs=47.6
Q ss_pred HHhcCCCCHHHHHHHHH--HHHHHhhhcccCCCccccCcccccchhHHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHH
Q 026565 20 LFLRRRLSTLQWMAIVL--LAVGTTTSQVKGCGEALCDSLFAAPIQGYLLGVLSACLSALAGVYTEFLMKKNNDSLYWQN 97 (237)
Q Consensus 20 ~~L~~~ls~~qw~al~l--l~~Gv~l~~~~~~~~~~~~~~~~~~~~G~~~~l~~a~~sa~a~vy~E~~~K~~~~~~~~~n 97 (237)
++=|+|+.+.|+.-+.+ .+.=+.+..+++. --.+...++.++.+.++-+.|...++|+.+....+-.
T Consensus 323 ~~~~~~iHpiQYlLVGlAl~lFYLLLLSlSEH-----------igF~~AYliAa~a~v~li~~Y~~~vl~~~k~g~~~~~ 391 (436)
T PRK11715 323 LLKKLRIHPVQYLLVGLALVLFYLLLLSLSEH-----------IGFTLAYLIAALACVLLIGFYLSAVLRSWKRGLLFAA 391 (436)
T ss_pred HhcCceecHHHHHHHHHHHHHHHHHHHHHHhh-----------hchHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHH
Confidence 44588999999865433 3333444454432 1123345566667778899999999998765544433
Q ss_pred HHHHHHHHHHHHH
Q 026565 98 VQLYTFGAIFNMF 110 (237)
Q Consensus 98 ~~L~~~~~~~~~~ 110 (237)
+...+++++..++
T Consensus 392 ~L~~LYg~Ly~lL 404 (436)
T PRK11715 392 ALAALYGVLYGLL 404 (436)
T ss_pred HHHHHHHHHHHHH
Confidence 3334444444443
No 115
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=33.01 E-value=4.8e+02 Score=25.59 Aligned_cols=18 Identities=22% Similarity=0.527 Sum_probs=14.7
Q ss_pred HHHHHHHHHHHHhhhccc
Q 026565 30 QWMAIVLLAVGTTTSQVK 47 (237)
Q Consensus 30 qw~al~ll~~Gv~l~~~~ 47 (237)
.|+.+++.+.|+++...+
T Consensus 240 D~IG~~L~~~Gl~LfLlg 257 (599)
T PF06609_consen 240 DWIGIFLFIAGLALFLLG 257 (599)
T ss_pred hHHHHHHHHHHHHHHHHH
Confidence 489999999999887544
No 116
>COG4720 Predicted membrane protein [Function unknown]
Probab=32.09 E-value=86 Score=25.62 Aligned_cols=31 Identities=23% Similarity=0.358 Sum_probs=23.3
Q ss_pred ccccccchHHHHHHHHHHHhhhhhhhhhhhh
Q 026565 129 RLFDGYNITTWMVVFNLGSTGLLVSWLMKYA 159 (237)
Q Consensus 129 ~~~~g~~~~~~~~il~~a~~Gl~va~vlk~~ 159 (237)
+++.||+.|++..+..+...|++.+.+-|+.
T Consensus 68 Dll~gy~~W~~~tlv~~G~~g~i~g~~~k~~ 98 (177)
T COG4720 68 DLLSGYPSWMFFTLVIHGLIGLIAGLFGKRE 98 (177)
T ss_pred HHhcCCccHHHHHHHHhchhhhhhhhhhhhh
Confidence 3677788887777777777888888876655
No 117
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=31.24 E-value=4.1e+02 Score=24.19 Aligned_cols=58 Identities=14% Similarity=0.209 Sum_probs=50.2
Q ss_pred hhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHhHhccCC
Q 026565 151 LVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAP 208 (237)
Q Consensus 151 ~va~vlk~~d~i~k~~a~s~siv~s~lls~~~f~~~~t~~~~vG~~lV~~s~~lY~~~ 208 (237)
+.-..+.+.|+-+-.....+.|+.+++++.++++++++...+...++-.+|+-+-..+
T Consensus 108 l~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~ 165 (345)
T KOG2234|consen 108 LQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLP 165 (345)
T ss_pred HHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhcc
Confidence 3445567788888888889999999999999999999999999999999999887743
No 118
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=30.90 E-value=2.1e+02 Score=25.60 Aligned_cols=36 Identities=19% Similarity=0.305 Sum_probs=31.9
Q ss_pred HHHHHHHHHHHcCCCccHHHHHHHHHHHHHhHhccC
Q 026565 172 MLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFA 207 (237)
Q Consensus 172 iv~s~lls~~~f~~~~t~~~~vG~~lV~~s~~lY~~ 207 (237)
++++.++|..+++.+++...++|...|..|...-..
T Consensus 123 iIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~ 158 (372)
T KOG3912|consen 123 IIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGS 158 (372)
T ss_pred hhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeee
Confidence 678999999999999999999999999988876543
No 119
>COG0004 AmtB Ammonia permease [Inorganic ion transport and metabolism]
Probab=29.63 E-value=4.6e+02 Score=24.45 Aligned_cols=83 Identities=17% Similarity=0.179 Sum_probs=47.7
Q ss_pred ChhHH----HHHHHHHHHhcCCCC----HHHHHHHHHHHHHHhhh--cccCCCccccCcccccchhHHHHHHHHHHHHHH
Q 026565 8 TRPFH----FSLKFSRLFLRRRLS----TLQWMAIVLLAVGTTTS--QVKGCGEALCDSLFAAPIQGYLLGVLSACLSAL 77 (237)
Q Consensus 8 ~~p~~----~tall~~~~L~~~ls----~~qw~al~ll~~Gv~l~--~~~~~~~~~~~~~~~~~~~G~~~~l~~a~~sa~ 77 (237)
+.++| +.++...++++||.. ..+=-.+.+.+.|..+. .+-.....+....+.....-.+-..+++...++
T Consensus 163 gtVVHi~aG~aaLa~a~~lG~R~g~~~~~~~pHNl~~~~lGa~lLWfGWfGFN~GSal~~~~~a~~a~~nT~lAaa~g~l 242 (409)
T COG0004 163 GTVVHINAGFAALAAALVLGKRIGGKPVAIPPHNLPLVVLGAALLWFGWFGFNAGSALAANGVAALAFVNTNLAAAAGAL 242 (409)
T ss_pred CceEEechhHHHHHHHHHeecccCCCCCCCCCCchhHHHHHHHHHHHHHccCCccchhhhhhhHHHHHHHHHHHHHHHHH
Confidence 45667 889999999999975 22222344555555443 333332222111112222334445567777888
Q ss_pred HHHHHHHHhhcCC
Q 026565 78 AGVYTEFLMKKNN 90 (237)
Q Consensus 78 a~vy~E~~~K~~~ 90 (237)
+....|++.|++.
T Consensus 243 ~w~~~e~~~~~Kp 255 (409)
T COG0004 243 GWMLIEWLRNGKP 255 (409)
T ss_pred HHHHHHHHHcCCC
Confidence 9999999885553
No 120
>smart00793 AgrB Accessory gene regulator B. The accessory gene regulator (agr) of Staphylococcus aureus is the central regulatory system that controls the gene expression for a large set of virulence factors. The arg locus consists of two transcripts: RNAII and RNAIII. RNAII encodes four genes (agrA, B, C, and D) whose gene products assemble a quorum sensing system. At low cell density, the agr genes are continuously expressed at basal levels. A signal molecule, autoinducing peptide (AIP), produced and secreted by the bacteria, accumulates outside of the cells. When the cell density increases and the AIP concentration reaches a threshold, it activates the agr response, i.e. activation of secreted protein gene expression and subsequent repression of cell wall-associated protein genes. AgrB and AgrD are essential for the production of the autoinducing peptide which functions as a signal for quorum sensing. AgrB is a transmembrane protein PUBMED:11195102. AgrB is involved in the proteolyt
Probab=29.07 E-value=2e+02 Score=23.25 Aligned_cols=17 Identities=12% Similarity=0.108 Sum_probs=9.6
Q ss_pred hhhHHHHHHHHHHHHHH
Q 026565 158 YADNIIKVYSTSMAMLL 174 (237)
Q Consensus 158 ~~d~i~k~~a~s~siv~ 174 (237)
|+++-.+++..++.+.+
T Consensus 72 Ha~t~~~C~i~S~~~~~ 88 (184)
T smart00793 72 HAKSSLLCTLLSIIIFV 88 (184)
T ss_pred ecCCcHHHHHHHHHHHH
Confidence 55666666655555433
No 121
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=27.60 E-value=6.4e+02 Score=25.35 Aligned_cols=20 Identities=15% Similarity=0.340 Sum_probs=12.1
Q ss_pred cCCCCHHHHHHHHHHHHHHh
Q 026565 23 RRRLSTLQWMAIVLLAVGTT 42 (237)
Q Consensus 23 ~~~ls~~qw~al~ll~~Gv~ 42 (237)
+-..++.||..++++..+.+
T Consensus 158 ~~~~~~~~~~l~~i~~l~~~ 177 (742)
T TIGR01299 158 ECGHGRFQWALFFVLGLALM 177 (742)
T ss_pred HcCCCHHHHHHHHHHHHHHH
Confidence 34456788877666555443
No 122
>PF06166 DUF979: Protein of unknown function (DUF979); InterPro: IPR009323 This family consists of several putative bacterial membrane proteins. The function of this family is unclear.
Probab=26.88 E-value=2.4e+02 Score=25.12 Aligned_cols=51 Identities=24% Similarity=0.427 Sum_probs=30.3
Q ss_pred HHHcCCCccHHHHHHHHHHHHHhHhccCCCCCCCCCCCcCcCCCchhhhhhhhhccC
Q 026565 180 VYLFNFKPTLQLFLGIIICMMSLHMYFAPPGMLVDIPSTAKAAPDSLREVSVERRTD 236 (237)
Q Consensus 180 ~~~f~~~~t~~~~vG~~lV~~s~~lY~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (237)
.+.||+. -+....|..++.++..--...-++ .+.+.++|.++|++-+|-+.
T Consensus 41 ~F~~G~~-lp~~~~G~lvl~m~~la~~~~v~~-----g~~~~~s~e~r~~~a~rlGn 91 (308)
T PF06166_consen 41 IFIFGDY-LPPFVVGILVLVMALLAGFGQVGI-----GSYKEPSEEEREASAKRLGN 91 (308)
T ss_pred HHHcCcc-chhHHHHHHHHHHHHHHHcCCCCC-----CCCCCCCHHHHHHHHHHhcC
Confidence 3345543 334678888888877644433321 12345566778888888664
No 123
>TIGR00836 amt ammonium transporter. The mechanism of energy coupling, if any, to methyl-NH2 or NH3 uptake by the AmtB protein of E. coli is not entirely clear. NH4+ uniport driven by the pmf, energy independent NH3 facilitation, and NH4+/K+ antiport have been proposed as possible transport mechanisms. In Corynebacterium glutamicum and Arabidopsis thaliana, uptake via the Amt1 homologues of AmtB has been reported to be driven by the pmf.
Probab=26.74 E-value=2e+02 Score=26.67 Aligned_cols=82 Identities=15% Similarity=0.090 Sum_probs=45.3
Q ss_pred ChhHH----HHHHHHHHHhcCCCCHH------HHHHHHHHHHHHhhh--cccCCCccccCcccccchhHHHHHHHHHHHH
Q 026565 8 TRPFH----FSLKFSRLFLRRRLSTL------QWMAIVLLAVGTTTS--QVKGCGEALCDSLFAAPIQGYLLGVLSACLS 75 (237)
Q Consensus 8 ~~p~~----~tall~~~~L~~~ls~~------qw~al~ll~~Gv~l~--~~~~~~~~~~~~~~~~~~~G~~~~l~~a~~s 75 (237)
+.|+| ++++...+++++|..+. +--+..+.+.|..+. .+......+....+.....-.+=..+++..+
T Consensus 160 ~~vVH~~gG~~~L~~a~~LGpR~~r~~~~~~~~~~n~~~~~lGt~lLw~gW~gFN~Gs~~~~~~~~~~a~~nT~lA~a~g 239 (403)
T TIGR00836 160 GGVVHIVGGVAGLAAALVLGPRIGRFPRPVAIRPHNVPLVVLGTFILWFGWFGFNAGSALAANGTAAYAAVNTNLAAAAG 239 (403)
T ss_pred ceeEecchhHHHHHHHHHhcCCCCCCcCcCCCCCCCHHHHHHHHHHHHHHHhcccchhhcccchHHHHHHHHHHHHHHHH
Confidence 56788 78888888998877543 123455555565443 2333322111111111223334455677778
Q ss_pred HHHHHHHHHHhhcC
Q 026565 76 ALAGVYTEFLMKKN 89 (237)
Q Consensus 76 a~a~vy~E~~~K~~ 89 (237)
+++....|+..+++
T Consensus 240 ~l~~~~~~~~~~gk 253 (403)
T TIGR00836 240 GLTWLLIDWLKHGK 253 (403)
T ss_pred HHHHHHHHHHhcCC
Confidence 88888888876443
No 124
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=25.30 E-value=56 Score=28.95 Aligned_cols=34 Identities=24% Similarity=0.457 Sum_probs=30.5
Q ss_pred HHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhhcc
Q 026565 13 FSLKFSRLFLRRRLSTLQWMAIVLLAVGTTTSQV 46 (237)
Q Consensus 13 ~tall~~~~L~~~ls~~qw~al~ll~~Gv~l~~~ 46 (237)
++.+++.+.++.++++..|++..+.+.|..+...
T Consensus 281 vSLl~SiiyF~Npft~~h~lGa~lVF~Gt~~fa~ 314 (330)
T KOG1583|consen 281 VSLLFSIIYFENPFTPWHWLGAALVFFGTLLFAN 314 (330)
T ss_pred HHHhheeeEecCCCCHHHHHHHHHHHHHHHHHHH
Confidence 7788899999999999999999999999888763
No 125
>PF05620 DUF788: Protein of unknown function (DUF788); InterPro: IPR008506 This family consists of several eukaryotic proteins of unknown function.
Probab=24.53 E-value=3.7e+02 Score=21.49 Aligned_cols=15 Identities=33% Similarity=0.510 Sum_probs=12.6
Q ss_pred CCchhhhhhhhhccC
Q 026565 222 APDSLREVSVERRTD 236 (237)
Q Consensus 222 ~~~~~~~~~~~~~~~ 236 (237)
..++-++++.|||.+
T Consensus 155 ~~~sKrq~K~err~~ 169 (170)
T PF05620_consen 155 EAKSKRQEKMERRAN 169 (170)
T ss_pred ccccHHHHHHHHhcc
Confidence 667888999999976
No 126
>PRK02935 hypothetical protein; Provisional
Probab=24.31 E-value=3e+02 Score=20.61 Aligned_cols=21 Identities=29% Similarity=0.512 Sum_probs=17.0
Q ss_pred ccHHHHHHHHHHHHHhHhccC
Q 026565 187 PTLQLFLGIIICMMSLHMYFA 207 (237)
Q Consensus 187 ~t~~~~vG~~lV~~s~~lY~~ 207 (237)
.+...++|...++.|+.+|.+
T Consensus 40 m~ifm~~G~l~~l~S~vvYFw 60 (110)
T PRK02935 40 MTIFMLLGFLAVIASTVVYFW 60 (110)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 455577899999999999966
No 127
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=24.05 E-value=90 Score=24.82 Aligned_cols=25 Identities=20% Similarity=0.308 Sum_probs=20.5
Q ss_pred hcCCCCHHHHHHHHHHHHHHhhhcc
Q 026565 22 LRRRLSTLQWMAIVLLAVGTTTSQV 46 (237)
Q Consensus 22 L~~~ls~~qw~al~ll~~Gv~l~~~ 46 (237)
-+|+++..++.+++++.+|+.+.+.
T Consensus 122 ~~~~~~~~r~lgi~L~l~gil~~~~ 146 (150)
T COG3238 122 PKRPLNLPRILGILLVLAGILLARR 146 (150)
T ss_pred CcCCCCHHHHHHHHHHHHHHHHhcc
Confidence 3589999999999999999666653
No 128
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=23.48 E-value=4.9e+02 Score=24.51 Aligned_cols=43 Identities=14% Similarity=0.204 Sum_probs=22.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHhHhccC
Q 026565 163 IKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFA 207 (237)
Q Consensus 163 ~k~~a~s~siv~s~lls~~~f~~~~t~~~~vG~~lV~~s~~lY~~ 207 (237)
.|.+-...+.+.......++|-.+-++ +.+.++.+++...|+.
T Consensus 100 Rk~~l~~~~~~~~~~~~~l~~v~~~~~--~~~~~l~iia~v~~~~ 142 (477)
T PF11700_consen 100 RKRFLLIFTLLGVLATALLWFVSPGQW--WLALVLFIIANVGYEA 142 (477)
T ss_pred chHHHHHHHHHHHHHHHHHHHhCcchH--HHHHHHHHHHHHHHHH
Confidence 355555555444433334444333333 6777777776666644
No 129
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=22.81 E-value=4.4e+02 Score=25.14 Aligned_cols=37 Identities=24% Similarity=0.135 Sum_probs=22.6
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHH
Q 026565 68 GVLSACLSALAGVYTEFLMKKNNDSLYWQNVQLYTFG 104 (237)
Q Consensus 68 ~l~~a~~sa~a~vy~E~~~K~~~~~~~~~n~~L~~~~ 104 (237)
+++-++++.++|-..-|.+|.-+..-|.++..+....
T Consensus 303 i~~y~~~~~iaGy~S~~~yk~~~g~~W~~~~~lt~~~ 339 (521)
T PF02990_consen 303 IILYALTSFIAGYVSARLYKSFGGKKWKKNSILTSLL 339 (521)
T ss_pred HHHHHHHhhHHHHHHHHHHHHcCCCceeehhhHHHHH
Confidence 3445555666666666777765555677777765433
No 130
>PRK10666 ammonium transporter; Provisional
Probab=22.68 E-value=5.1e+02 Score=24.25 Aligned_cols=82 Identities=12% Similarity=0.132 Sum_probs=42.0
Q ss_pred ChhHH----HHHHHHHHHhcCCCCHHH----HHHHHHHHHHHhhh--cccCCCccccCcccccchhHHHHHHHHHHHHHH
Q 026565 8 TRPFH----FSLKFSRLFLRRRLSTLQ----WMAIVLLAVGTTTS--QVKGCGEALCDSLFAAPIQGYLLGVLSACLSAL 77 (237)
Q Consensus 8 ~~p~~----~tall~~~~L~~~ls~~q----w~al~ll~~Gv~l~--~~~~~~~~~~~~~~~~~~~G~~~~l~~a~~sa~ 77 (237)
+.|+| ++++...+++++|..+.+ --...+.+.|..+. .+......+....+.......+=..+++..+++
T Consensus 186 ~~vVH~~gG~~aL~~a~~lG~R~g~~~~~~~~hn~~~~~lGt~lLw~GW~gFN~Gs~~~~~~~a~~a~~nT~la~a~g~l 265 (428)
T PRK10666 186 GTVVHINAAVAGLVGAYLLGKRVGFGKEAFKPHNLPMVFTGTAILYIGWFGFNAGSAGAANEIAALAFVNTVVATAAAIL 265 (428)
T ss_pred cchhHHhHHHHHHHHHHHhcccCCCCCCCCCCCCHHHHHHHHHHHHHHHHhccchhhccccchHHHHHHHHHHHHHHHHH
Confidence 67889 888888899998854211 11233344454443 222222111101111122233445556666777
Q ss_pred HHHHHHHHhhcC
Q 026565 78 AGVYTEFLMKKN 89 (237)
Q Consensus 78 a~vy~E~~~K~~ 89 (237)
+....|+..+++
T Consensus 266 ~~~~~~~~~~gk 277 (428)
T PRK10666 266 GWVFGEWALRGK 277 (428)
T ss_pred HHHHHHHHHhCC
Confidence 777777765543
No 131
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=21.93 E-value=5.2e+02 Score=22.31 Aligned_cols=21 Identities=29% Similarity=0.371 Sum_probs=13.5
Q ss_pred CCCCHHHHHHHHHHHHHHhhh
Q 026565 24 RRLSTLQWMAIVLLAVGTTTS 44 (237)
Q Consensus 24 ~~ls~~qw~al~ll~~Gv~l~ 44 (237)
|+.+++||........+-...
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~ 24 (405)
T TIGR00891 4 RHLTRAQWNAFSAAWLGWLLD 24 (405)
T ss_pred CcCCcccHHHHHHHHHHHHHH
Confidence 456778887766666655443
No 132
>PF05251 UPF0197: Uncharacterised protein family (UPF0197); InterPro: IPR007915 This family of proteins is functionally uncharacterised, but is thought to be a transmembrane protein.
Probab=21.56 E-value=1.7e+02 Score=20.57 Aligned_cols=40 Identities=15% Similarity=0.166 Sum_probs=17.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHH
Q 026565 63 QGYLLGVLSACLSALAGVYTEFLMKKNNDSLYWQNVQLYTFG 104 (237)
Q Consensus 63 ~G~~~~l~~a~~sa~a~vy~E~~~K~~~~~~~~~n~~L~~~~ 104 (237)
...++..++-++.|---+| |-.-.|+++++. +.+.+...+
T Consensus 19 La~vll~iGl~fta~Ffiy-evts~k~~r~i~-kEl~~a~vA 58 (77)
T PF05251_consen 19 LAVVLLAIGLFFTAWFFIY-EVTSTKKTRSIA-KELLIALVA 58 (77)
T ss_pred HHHHHHHHHHHHHHHHHHH-hhhcCcccccHH-HHHHHHHHH
Confidence 3344444444444444444 444333334444 344444333
No 133
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=21.02 E-value=1.7e+02 Score=26.55 Aligned_cols=57 Identities=14% Similarity=0.160 Sum_probs=37.4
Q ss_pred CHHHHHHHHHHHHHHhhhcccCCCccc---cCcccccchhHHHHHHHHHHHHHHHHHHHH
Q 026565 27 STLQWMAIVLLAVGTTTSQVKGCGEAL---CDSLFAAPIQGYLLGVLSACLSALAGVYTE 83 (237)
Q Consensus 27 s~~qw~al~ll~~Gv~l~~~~~~~~~~---~~~~~~~~~~G~~~~l~~a~~sa~a~vy~E 83 (237)
...-.+.+++..+|++++.......++ .+....+.-.|+++++.+.++|++-++=.|
T Consensus 134 g~~vL~Gv~v~LiGIai~g~AG~~Ke~~~~~~~~efn~~kGl~iAv~sGv~Sa~fn~g~~ 193 (344)
T PF06379_consen 134 GQIVLLGVAVCLIGIAICGKAGSMKEKELGEEAKEFNFKKGLIIAVLSGVMSACFNFGLD 193 (344)
T ss_pred chhhhhHHHHHHHHHHHHhHHHHhhhhhhccchhhhhhhhhHHHHHHHHHHHHHHHHHHH
Confidence 345577888889999888754432111 111122345799999999999888877666
No 134
>PRK01100 putative accessory gene regulator protein; Provisional
Probab=20.83 E-value=3e+02 Score=22.91 Aligned_cols=12 Identities=33% Similarity=0.130 Sum_probs=5.2
Q ss_pred hhhHHHHHHHHH
Q 026565 158 YADNIIKVYSTS 169 (237)
Q Consensus 158 ~~d~i~k~~a~s 169 (237)
|+++-.++...+
T Consensus 84 Ha~s~~~C~I~S 95 (210)
T PRK01100 84 HATNSINCTLIS 95 (210)
T ss_pred ecCCCcHHHHHH
Confidence 344444444433
No 135
>PF07214 DUF1418: Protein of unknown function (DUF1418); InterPro: IPR010815 This family consists of several hypothetical Enterobacterial proteins of around 100 residues in length. Members of this family are often described as YbjC. In Escherichia coli the ybjC gene is located downstream of nfsA (which encodes the major oxygen-insensitive nitroreductase). It is thought that nfsA and ybjC form an operon an its promoter is a class I SoxS-dependent promoter []. The function of this family is unknown.
Probab=20.81 E-value=1.3e+02 Score=22.09 Aligned_cols=11 Identities=18% Similarity=0.585 Sum_probs=6.2
Q ss_pred CccccCCChhH
Q 026565 1 MEAISMITRPF 11 (237)
Q Consensus 1 ~~~~~~i~~p~ 11 (237)
|.++++.+.|+
T Consensus 1 Mrsl~~LPk~V 11 (96)
T PF07214_consen 1 MRSLGDLPKPV 11 (96)
T ss_pred CcchhhCChHH
Confidence 44555566555
No 136
>PF13124 DUF3963: Protein of unknown function (DUF3963)
Probab=20.53 E-value=2e+02 Score=17.07 Aligned_cols=23 Identities=9% Similarity=0.140 Sum_probs=15.0
Q ss_pred HHHHHHHhhcCCchhHHHHHHHHHH
Q 026565 79 GVYTEFLMKKNNDSLYWQNVQLYTF 103 (237)
Q Consensus 79 ~vy~E~~~K~~~~~~~~~n~~L~~~ 103 (237)
..+.||.+.+- .-|+||+..++.
T Consensus 6 ~~fieryfddi--qkwirnit~cfa 28 (40)
T PF13124_consen 6 TAFIERYFDDI--QKWIRNITFCFA 28 (40)
T ss_pred HHHHHHHHHHH--HHHHHHHHHHHH
Confidence 34567777443 469999977643
No 137
>PF11044 TMEMspv1-c74-12: Plectrovirus spv1-c74 ORF 12 transmembrane protein; InterPro: IPR022743 This is a group of proteins expressed by Plectroviruses. The Plectroviruses are single-stranded DNA viruses belonging to the Inoviridae. This entry represents putative transmembrane proteins of unknown function.
Probab=20.33 E-value=13 Score=23.14 Aligned_cols=19 Identities=11% Similarity=0.300 Sum_probs=9.3
Q ss_pred ccHHHHHHHHHHHHHhHhc
Q 026565 187 PTLQLFLGIIICMMSLHMY 205 (237)
Q Consensus 187 ~t~~~~vG~~lV~~s~~lY 205 (237)
|+|...+=..+++++++.|
T Consensus 2 p~wlt~iFsvvIil~If~~ 20 (49)
T PF11044_consen 2 PTWLTTIFSVVIILGIFAW 20 (49)
T ss_pred chHHHHHHHHHHHHHHHHH
Confidence 3444444445555555554
No 138
>PF04550 Phage_holin_2: Phage holin family 2 ; InterPro: IPR007633 This entry represents the Bacteriophage P2, GpY, holin protein. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This protein family represent one of a large number of mutually dissimilar families of phage holins. It is thought that the temporal precision of holin-mediated lysis may occur through the build-up of a holin oligomer which causes the lysis [].
Probab=20.28 E-value=3.4e+02 Score=19.57 Aligned_cols=29 Identities=10% Similarity=0.098 Sum_probs=20.5
Q ss_pred hcCCCCHHHHHHH------HHHHHHHhhhcccCCC
Q 026565 22 LRRRLSTLQWMAI------VLLAVGTTTSQVKGCG 50 (237)
Q Consensus 22 L~~~ls~~qw~al------~ll~~Gv~l~~~~~~~ 50 (237)
=+|++|+|..++= +-+++|.+++++|+.+
T Consensus 26 s~Epit~RL~iGR~ilGs~~S~~Aga~Li~~Pdl~ 60 (89)
T PF04550_consen 26 SNEPITLRLFIGRVILGSAVSVVAGAALIQFPDLP 60 (89)
T ss_pred cCCCCchhHHhHHHHHhhHHHHHHHHHHhcCCCCC
Confidence 4688888887763 4456777788877754
No 139
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=20.24 E-value=25 Score=30.53 Aligned_cols=44 Identities=20% Similarity=0.338 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHHHHHHHcCCCccHHH----HHHHHHHHHHhHhccCCC
Q 026565 166 YSTSMAMLLTMVLSVYLFNFKPTLQL----FLGIIICMMSLHMYFAPP 209 (237)
Q Consensus 166 ~a~s~siv~s~lls~~~f~~~~t~~~----~vG~~lV~~s~~lY~~~~ 209 (237)
..+.+..|-+.+++++.|||-.+... +++..++++|+++-+...
T Consensus 91 iStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~ 138 (288)
T COG4975 91 ISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQD 138 (288)
T ss_pred ccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEeeeec
Confidence 45567789999999999999887763 344567778888766543
Done!