Query Summary

Your job contains 1 sequence.

Parameters

Threshold: 0.001

Maximum number of alignments shown: 100

BLAST filter: on

Query Sequence

>026566
MIQNLLGTSVTFKFEAYMVFNNLMIMDACQIDFILGSWVHSELPTGAALNITSLSAYLNS
STDAPNLLIELIQSSPSSLVLILDLSPRKDLVLHPDYLQTFYESTRLDEYRQMLEKVPEV
RPYFSSSLYLRCVISPSAIMVRVDTETETGAGESTRLDYIITNHVHPVAKQVIGIWLNQC
ACGGRHVGESDKAYLEKRDGLIKNKTIEIDLGSSFPRLFGPQVASRVLGEIQKVFTA

High Scoring Gene Products

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  026566
        (237 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2115105 - symbol:ACD2 "ACCELERATED CELL DEATH ...   540  4.4e-52   1


>TAIR|locus:2115105 [details] [associations]
            symbol:ACD2 "ACCELERATED CELL DEATH 2" species:3702
            "Arabidopsis thaliana" [GO:0009507 "chloroplast" evidence=ISM;IDA]
            [GO:0015996 "chlorophyll catabolic process" evidence=RCA;IMP;TAS]
            [GO:0051743 "red chlorophyll catabolite reductase activity"
            evidence=IDA;TAS] [GO:0005739 "mitochondrion" evidence=IDA]
            [GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0009570
            "chloroplast stroma" evidence=IDA] [GO:0005737 "cytoplasm"
            evidence=IDA] [GO:0005829 "cytosol" evidence=RCA;IDA] [GO:0009814
            "defense response, incompatible interaction" evidence=IMP]
            [GO:0043067 "regulation of programmed cell death" evidence=IMP]
            [GO:0005515 "protein binding" evidence=IPI] [GO:0000023 "maltose
            metabolic process" evidence=RCA] [GO:0006098 "pentose-phosphate
            shunt" evidence=RCA] [GO:0006364 "rRNA processing" evidence=RCA]
            [GO:0010304 "PSII associated light-harvesting complex II catabolic
            process" evidence=RCA] [GO:0015995 "chlorophyll biosynthetic
            process" evidence=RCA] [GO:0016117 "carotenoid biosynthetic
            process" evidence=RCA] [GO:0019252 "starch biosynthetic process"
            evidence=RCA] [GO:0043085 "positive regulation of catalytic
            activity" evidence=RCA] [GO:0010363 "regulation of plant-type
            hypersensitive response" evidence=IMP] UniPathway:UPA00674
            GO:GO:0005829 GO:GO:0005739 GO:GO:0009570 EMBL:CP002687
            GenomeReviews:CT486007_GR GO:GO:0009941 EMBL:Z99707 EMBL:AL161590
            GO:GO:0015996 GO:GO:0009814 EMBL:AF326347 EMBL:AY045578
            EMBL:AY093785 EMBL:AY085797 IPI:IPI00538166 PIR:A85437
            RefSeq:NP_195417.1 UniGene:At.4644 UniGene:At.69554 PDB:2ZXK
            PDB:2ZXL PDB:3AGA PDB:3AGB PDB:3AGC PDBsum:2ZXK PDBsum:2ZXL
            PDBsum:3AGA PDBsum:3AGB PDBsum:3AGC ProteinModelPortal:Q8LDU4
            SMR:Q8LDU4 STRING:Q8LDU4 PaxDb:Q8LDU4 PRIDE:Q8LDU4
            EnsemblPlants:AT4G37000.1 GeneID:829854 KEGG:ath:AT4G37000
            TAIR:At4g37000 eggNOG:NOG265283 HOGENOM:HOG000243411
            InParanoid:Q8LDU4 KO:K13545 OMA:PDYLQTF PhylomeDB:Q8LDU4
            ProtClustDB:PLN02581 BioCyc:ARA:AT4G37000-MONOMER
            BioCyc:MetaCyc:AT4G37000-MONOMER EvolutionaryTrace:Q8LDU4
            Genevestigator:Q8LDU4 GermOnline:AT4G37000 GO:GO:0051743
            GO:GO:0010363 InterPro:IPR009439 Pfam:PF06405 Uniprot:Q8LDU4
        Length = 319

 Score = 540 (195.1 bits), Expect = 4.4e-52, P = 4.4e-52
 Identities = 106/208 (50%), Positives = 147/208 (70%)

Query:    31 IDFILGSWVHSELPTGAALNITSLSAYLNSSTDAPNLLIELIQSSPSSLVLILDLSPRKD 90
             IDF++GSW+H ++PTG +LNITS+S +LNSST APN ++ELIQSS  SLVLILDL  RKD
Sbjct:   115 IDFVIGSWIHCKIPTGVSLNITSISGFLNSSTKAPNFVVELIQSSSKSLVLILDLPHRKD 174

Query:    91 LVLHPDYLQTFYESTRLDEYRQMLEKVPEVRPYFSSSLYLRCVISPSAIMVRVDTETETG 150
             LVL+PDYL+ +Y+ T LD +RQ L K+PEV PY S SL++R   SP+A M+++D E    
Sbjct:   175 LVLNPDYLKEYYQDTALDSHRQSLLKLPEVNPYVSPSLFVRSAFSPTASMLKIDAE---- 230

Query:   151 AGESTRLDYIITNHVHPVAKQVIGIWLNQCACGGRH---VGESDKAYLEKRDGLIKNKTI 207
               E  +L+ I+ +HV P AK+V+ +WL +C         VGE ++  LE+RD   + K+I
Sbjct:   231 --EEDKLEEILRDHVSPAAKEVLEVWLERCVKEEEEKIVVGEEERMELERRDKSFRRKSI 288

Query:   208 EIDLGSSFPRLFGPQVASRVLGEIQKVF 235
             E DL   FPR+FG +V+SRV+  I++ F
Sbjct:   289 EDDLDLQFPRMFGEEVSSRVVHAIKEAF 316


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.320   0.136   0.395    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      237       237   0.00090  113 3  11 22  0.40    33
                                                     32  0.43    36


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  600 (64 KB)
  Total size of DFA:  172 KB (2101 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  20.61u 0.21s 20.82t   Elapsed:  00:00:01
  Total cpu time:  20.61u 0.21s 20.82t   Elapsed:  00:00:01
  Start:  Mon May 20 16:31:56 2013   End:  Mon May 20 16:31:57 2013

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